BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 011356
         (488 letters)

Database: nr 
           23,463,169 sequences; 8,064,228,071 total letters

Searching..................................................done



>gi|255575340|ref|XP_002528573.1| Ran GTPase binding protein, putative [Ricinus communis]
 gi|223532017|gb|EEF33828.1| Ran GTPase binding protein, putative [Ricinus communis]
          Length = 497

 Score =  850 bits (2195), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 408/487 (83%), Positives = 441/487 (90%)

Query: 1   MADRYRLFSIEELPSHLIFEILTSGRLSAVDLAHLELTSKTFGGSHGLYPQKFRSLVDLA 60
           MAD+YRL SI+ELPSHLI EIL +GRLSA DL  LELTSKTFGGSHGLYP KF+SLVD A
Sbjct: 1   MADKYRLVSIDELPSHLILEILMTGRLSATDLVCLELTSKTFGGSHGLYPHKFKSLVDFA 60

Query: 61  ASQLCALHSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNMQITTGR 120
           A QLCA HS+Y GM  N Q ELL+RC GNWKRVLRFL +VE SS +VETSAGNMQITTGR
Sbjct: 61  AFQLCASHSVYTGMLWNAQKELLDRCGGNWKRVLRFLLAVEESSGMVETSAGNMQITTGR 120

Query: 121 YHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
           YHTLLISNSSV+SCGSSLCGVLGHGPETTQCVSF+RI FPS A VVQVSAS NHAA++L+
Sbjct: 121 YHTLLISNSSVYSCGSSLCGVLGHGPETTQCVSFSRITFPSLARVVQVSASHNHAAYILE 180

Query: 181 SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTC 240
           SG+VFTCGDNSSFCCGH+DT+RPIFRPR VEALKGVPCKQV AGLNFT FLT  GHV++C
Sbjct: 181 SGEVFTCGDNSSFCCGHQDTSRPIFRPRFVEALKGVPCKQVAAGLNFTVFLTRTGHVYSC 240

Query: 241 GSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 300
           G+NTHGQLGHGDTLDRPTPK I   E +GSV QIAAGPSY+LAVT +GVVYSFGSGSNFC
Sbjct: 241 GTNTHGQLGHGDTLDRPTPKIIESFEGIGSVAQIAAGPSYVLAVTDSGVVYSFGSGSNFC 300

Query: 301 LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 360
           LGHGEQH+E  PRAIQTFRRK +HVVRVSAGDEHVVALDSSG+VYTWGKGYCGALGHGDE
Sbjct: 301 LGHGEQHNEFHPRAIQTFRRKNLHVVRVSAGDEHVVALDSSGFVYTWGKGYCGALGHGDE 360

Query: 361 IDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLR 420
           IDKTLPEPL+SLKSHLAVQVCARKRKTFVLVD G V+GFGWMGFGSLGFPDRGVSDKV+R
Sbjct: 361 IDKTLPEPLNSLKSHLAVQVCARKRKTFVLVDGGCVFGFGWMGFGSLGFPDRGVSDKVMR 420

Query: 421 PRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQE 480
           PRILDSLRAH VSQISTGLYHTV VT +G++FGFGDNERAQLGHDTLRGCLEPTEIF+QE
Sbjct: 421 PRILDSLRAHRVSQISTGLYHTVAVTSQGQVFGFGDNERAQLGHDTLRGCLEPTEIFLQE 480

Query: 481 MEEDTGL 487
              DTG+
Sbjct: 481 FGHDTGI 487


>gi|224114984|ref|XP_002316910.1| predicted protein [Populus trichocarpa]
 gi|222859975|gb|EEE97522.1| predicted protein [Populus trichocarpa]
          Length = 478

 Score =  823 bits (2127), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 396/478 (82%), Positives = 431/478 (90%)

Query: 1   MADRYRLFSIEELPSHLIFEILTSGRLSAVDLAHLELTSKTFGGSHGLYPQKFRSLVDLA 60
           MAD+ R  SIE+LPSHLIFEILT+GRLSAVDLA LELTS+TFGGSHGLYPQKFRSLVD A
Sbjct: 1   MADKNRSVSIEDLPSHLIFEILTTGRLSAVDLACLELTSRTFGGSHGLYPQKFRSLVDFA 60

Query: 61  ASQLCALHSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNMQITTGR 120
           A QLC  H +Y+GM  N Q  L  RC GNWKRVLRFLQ+VE SS +V+TSA NMQ+TTGR
Sbjct: 61  AYQLCVSHRVYSGMGWNAQKGLFGRCEGNWKRVLRFLQAVEESSGMVKTSASNMQVTTGR 120

Query: 121 YHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
           YHTLLI +SSV+SCGSSLCGVLGHG ETTQCV+FTRI FPS A+V+QVSAS NHAAFVLQ
Sbjct: 121 YHTLLIRDSSVYSCGSSLCGVLGHGAETTQCVAFTRIRFPSLAYVIQVSASHNHAAFVLQ 180

Query: 181 SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTC 240
           SG+VFTCGDNSSFCCGH DTNRPIFRPRLVEALKGVPCKQV  GLNFT FLT +G ++TC
Sbjct: 181 SGEVFTCGDNSSFCCGHNDTNRPIFRPRLVEALKGVPCKQVAVGLNFTVFLTRQGQLYTC 240

Query: 241 GSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 300
           G+NTHGQLGHGDT DRPTPK I  LE VGSVVQIAAGPSY+LAVT NGVVYSFGSGSN C
Sbjct: 241 GTNTHGQLGHGDTQDRPTPKIIELLEGVGSVVQIAAGPSYVLAVTDNGVVYSFGSGSNLC 300

Query: 301 LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 360
           LGHGEQHDE +PRAIQTFRRK IHVV VSAGDEH VALDSSG+VY+WGKGYCGALGHGDE
Sbjct: 301 LGHGEQHDEFRPRAIQTFRRKDIHVVHVSAGDEHAVALDSSGFVYSWGKGYCGALGHGDE 360

Query: 361 IDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLR 420
           IDKTLP  ++ LKSHLAVQVCARKRKTFVLVD GSVYGFGWMGFGSLGFPDRG+SDKV+R
Sbjct: 361 IDKTLPALVNCLKSHLAVQVCARKRKTFVLVDGGSVYGFGWMGFGSLGFPDRGLSDKVMR 420

Query: 421 PRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFI 478
           PR+LDSLRA HVSQISTGLYHTVVVT++G++FGFGDNERAQLGHDTLRGCL+PTEIF+
Sbjct: 421 PRVLDSLRARHVSQISTGLYHTVVVTNQGQMFGFGDNERAQLGHDTLRGCLQPTEIFV 478


>gi|225461391|ref|XP_002284809.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2 [Vitis
           vinifera]
 gi|302143037|emb|CBI20332.3| unnamed protein product [Vitis vinifera]
          Length = 492

 Score =  820 bits (2119), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 395/486 (81%), Positives = 431/486 (88%)

Query: 1   MADRYRLFSIEELPSHLIFEILTSGRLSAVDLAHLELTSKTFGGSHGLYPQKFRSLVDLA 60
           MA+RY   S EELPSHLI EIL+SGRLSAVDL  LELTS+TFG SHGLYP KFRSLVD A
Sbjct: 1   MANRYWSVSFEELPSHLILEILSSGRLSAVDLVCLELTSRTFGASHGLYPHKFRSLVDFA 60

Query: 61  ASQLCALHSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNMQITTGR 120
           A QLC  H IYA +S N Q +L +RC  NWKRVLRFLQSVE SS I ETSAGNMQITTGR
Sbjct: 61  AFQLCGSHPIYAALSLNAQKDLFDRCGENWKRVLRFLQSVEQSSYISETSAGNMQITTGR 120

Query: 121 YHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
           YHTLLI +SSV+SCGSSLCGVLGHGPETTQCV+F+RINFP  AHV QVSAS NHAAFV+Q
Sbjct: 121 YHTLLIKDSSVYSCGSSLCGVLGHGPETTQCVAFSRINFPPLAHVAQVSASHNHAAFVMQ 180

Query: 181 SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTC 240
           SG+VFTCGDNSSFCCGH DT RPIFRPRLVEALKGVPCKQV AGL+FT FLT++GHV+TC
Sbjct: 181 SGEVFTCGDNSSFCCGHGDTVRPIFRPRLVEALKGVPCKQVAAGLSFTVFLTMKGHVYTC 240

Query: 241 GSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 300
           G+NTHGQLGHGDT+DR TPK +  LE VG VVQIAAGPSY +AVT +G V+SFGSGSNFC
Sbjct: 241 GTNTHGQLGHGDTVDRRTPKIVELLEGVGPVVQIAAGPSYAMAVTDDGTVHSFGSGSNFC 300

Query: 301 LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 360
           LGHGEQH+EL+PRAIQ+FRRK IHVVR+SAGDEHVVALDSSG+VYTWGKGYCGALGHGDE
Sbjct: 301 LGHGEQHNELRPRAIQSFRRKTIHVVRISAGDEHVVALDSSGFVYTWGKGYCGALGHGDE 360

Query: 361 IDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLR 420
           IDKT PE LSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRG SDKV+R
Sbjct: 361 IDKTTPEILSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGASDKVMR 420

Query: 421 PRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQE 480
           P ILDSLR H++SQISTGLYHTV V ++G++FGFGDNERAQLGHDTLRGC  PTEIF+QE
Sbjct: 421 PWILDSLRGHYISQISTGLYHTVAVNNKGQIFGFGDNERAQLGHDTLRGCPVPTEIFVQE 480

Query: 481 MEEDTG 486
             +D G
Sbjct: 481 ATDDAG 486


>gi|224128193|ref|XP_002329104.1| predicted protein [Populus trichocarpa]
 gi|222869773|gb|EEF06904.1| predicted protein [Populus trichocarpa]
          Length = 492

 Score =  817 bits (2111), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 393/487 (80%), Positives = 430/487 (88%)

Query: 1   MADRYRLFSIEELPSHLIFEILTSGRLSAVDLAHLELTSKTFGGSHGLYPQKFRSLVDLA 60
           MA+RYRL SIE+ PSHLIFEILT GRLSA DL  LELTS+TFG SHGLYPQKFRSLVD A
Sbjct: 1   MANRYRLASIEDFPSHLIFEILTIGRLSAADLVCLELTSRTFGASHGLYPQKFRSLVDFA 60

Query: 61  ASQLCALHSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNMQITTGR 120
           A QLC  H +Y GM  N Q EL +RC GNWKRVLRFLQ+VE SS +V+TSA NMQ+TTGR
Sbjct: 61  AHQLCVSHRVYGGMGWNAQKELFDRCGGNWKRVLRFLQAVEESSGMVKTSACNMQVTTGR 120

Query: 121 YHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
           YHTLLI +SSV+SCGSSLCGVLGHG ETTQCV+FTRI FPS A+VVQVSAS NHAAFVLQ
Sbjct: 121 YHTLLIRDSSVYSCGSSLCGVLGHGAETTQCVAFTRIRFPSLANVVQVSASHNHAAFVLQ 180

Query: 181 SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTC 240
           SG+VFTCGDNSSFCCGH+DTNRPIFRPRLVEALK V CKQV+ GLNFT FLT +G ++TC
Sbjct: 181 SGEVFTCGDNSSFCCGHKDTNRPIFRPRLVEALKAVSCKQVSVGLNFTVFLTRQGQLYTC 240

Query: 241 GSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 300
           GSNTHGQLGHGDTLDRPTPK I  LE +G VVQIAAGPSY+LAVT NGVVYSFG GSNFC
Sbjct: 241 GSNTHGQLGHGDTLDRPTPKIIELLEGIGPVVQIAAGPSYVLAVTDNGVVYSFGYGSNFC 300

Query: 301 LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 360
           LGHGEQHDE QPRAIQTFRRK IHVV VSAGDEH VALDSSG+VY+WGKGYCGALGHGDE
Sbjct: 301 LGHGEQHDEFQPRAIQTFRRKDIHVVHVSAGDEHAVALDSSGFVYSWGKGYCGALGHGDE 360

Query: 361 IDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLR 420
           IDKTLP  ++ LKS LAVQ CARKRKTFVLVD GSVYGFG MGFGSLGFPDR +++KV+ 
Sbjct: 361 IDKTLPSLVNCLKSRLAVQACARKRKTFVLVDDGSVYGFGCMGFGSLGFPDRDITEKVMT 420

Query: 421 PRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQE 480
           PR+LDSLRAH VSQISTGLYHTVVVT++G++FGFGDNER QLGHDTLRGCL+PTEIF+QE
Sbjct: 421 PRVLDSLRAHRVSQISTGLYHTVVVTNQGQMFGFGDNERVQLGHDTLRGCLQPTEIFVQE 480

Query: 481 MEEDTGL 487
             +DTGL
Sbjct: 481 TADDTGL 487


>gi|147820281|emb|CAN60415.1| hypothetical protein VITISV_023540 [Vitis vinifera]
          Length = 511

 Score =  815 bits (2106), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 395/488 (80%), Positives = 430/488 (88%), Gaps = 4/488 (0%)

Query: 1   MADRYRLFSIEELPSHLIFEILTSGRLSAVDLAHLELTSKTFGGSHGLYPQKFRSLVDLA 60
           MA+RY   S EELPSHLI EIL+SGRLSAVDL  LELTS+TFG SHGLYP KFRSLVD A
Sbjct: 1   MANRYWSVSFEELPSHLILEILSSGRLSAVDLVCLELTSRTFGASHGLYPHKFRSLVDFA 60

Query: 61  ASQLCALHSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNMQITTGR 120
           A QLC  H IYA +S N Q +L +RC  NWKRVLRFLQSVE SS I ETSAGNMQITTGR
Sbjct: 61  AFQLCGSHPIYAALSLNAQKDLFDRCGENWKRVLRFLQSVEQSSYISETSAGNMQITTGR 120

Query: 121 YHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
           YHTLLI +SSV+SCGSSLCGVLGHGPETTQCV+F+RINFP  AHV QVSAS NHAAFV+Q
Sbjct: 121 YHTLLIKDSSVYSCGSSLCGVLGHGPETTQCVAFSRINFPPLAHVAQVSASHNHAAFVMQ 180

Query: 181 SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTC 240
           SG+VFTCGDNSSFCCGH DT RPIFRPRLVEALKGVPCKQV AGL+FT FLT++GHV+TC
Sbjct: 181 SGEVFTCGDNSSFCCGHGDTVRPIFRPRLVEALKGVPCKQVAAGLSFTVFLTMKGHVYTC 240

Query: 241 GSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 300
           G+NTHGQLGHGDT+DR TPK +  LE VG VVQIAAGPSY +AVT +G V+SFGSGSNFC
Sbjct: 241 GTNTHGQLGHGDTVDRRTPKIVELLEGVGPVVQIAAGPSYAMAVTDDGTVHSFGSGSNFC 300

Query: 301 LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 360
           LGHGEQH+EL+PRAIQ+FRRK IHVVR+SAGDEHVVALDSSG+VYTWGKGYCGALGHGDE
Sbjct: 301 LGHGEQHNELRPRAIQSFRRKTIHVVRISAGDEHVVALDSSGFVYTWGKGYCGALGHGDE 360

Query: 361 IDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLR 420
           IDKT PE LSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRG SDKV+R
Sbjct: 361 IDKTTPEILSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGASDKVMR 420

Query: 421 PRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF--- 477
           P ILDSLR H++SQISTGLYHTV V ++G++FGFGDNERAQLGHDTLRGC  PTEIF   
Sbjct: 421 PWILDSLRGHYISQISTGLYHTVAVXNKGQIFGFGDNERAQLGHDTLRGCPVPTEIFASP 480

Query: 478 -IQEMEED 484
            + EME D
Sbjct: 481 TVAEMERD 488


>gi|356549747|ref|XP_003543252.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Glycine
           max]
          Length = 485

 Score =  800 bits (2065), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 389/484 (80%), Positives = 426/484 (88%), Gaps = 3/484 (0%)

Query: 1   MADRYRLFSIEELPSHLIFEILTSGRLSAVDLAHLELTSKTFGGSHGLYPQKFRSLVDLA 60
           M +R R FSIEELPSHL+ EIL SGRLSA+DL  LELTSKTFGGSHGL+P KF+SLV  A
Sbjct: 1   MGERCRHFSIEELPSHLVLEILCSGRLSAMDLVCLELTSKTFGGSHGLHPFKFKSLVAFA 60

Query: 61  ASQLCALHSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNMQITTGR 120
           A QLCA H  YA M  N Q EL +RC GNWKRVLRFLQSVE SS +VETS+GNMQITTG+
Sbjct: 61  AFQLCASHVTYARMGLNSQRELYDRCGGNWKRVLRFLQSVEQSSQMVETSSGNMQITTGK 120

Query: 121 YHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
           YHTLLISNSSV+SCGS LCGVLG G ETTQCV+FTRI+FP  A VV VSAS NHAAFV+Q
Sbjct: 121 YHTLLISNSSVYSCGSGLCGVLGQGSETTQCVAFTRIDFPPLARVVHVSASFNHAAFVMQ 180

Query: 181 SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTC 240
           SG+VFTCGDNSS CCGHRDT RPIFRPRLVE+LKG+PCKQV AGLNFT FLT +GHV+TC
Sbjct: 181 SGEVFTCGDNSSSCCGHRDTTRPIFRPRLVESLKGIPCKQVAAGLNFTVFLTRKGHVYTC 240

Query: 241 GSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 300
           G+NTHGQLGHGDT DRPTPK I   E + SVVQIAAGPSY+L+VT NG VYSFGSG+NFC
Sbjct: 241 GTNTHGQLGHGDTQDRPTPKMI---EVLSSVVQIAAGPSYILSVTENGTVYSFGSGANFC 297

Query: 301 LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 360
           LGHGEQHDELQPRAIQ FRRKGIH+VRVSAGDEH VALDS+GYVYTWGKGYCGALGHGDE
Sbjct: 298 LGHGEQHDELQPRAIQKFRRKGIHIVRVSAGDEHAVALDSNGYVYTWGKGYCGALGHGDE 357

Query: 361 IDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLR 420
           I+KT PE L+SLK+ L VQVCARKRKTFVLVD+GSVYGFG MGFGSLGF DR VSDKVL+
Sbjct: 358 IEKTTPELLTSLKNQLVVQVCARKRKTFVLVDSGSVYGFGSMGFGSLGFLDRRVSDKVLK 417

Query: 421 PRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQE 480
           PRILD+LR HHVSQISTGLYHTVV+T RG++FGFGDNERAQLGHDTLR CLEPTEIFI++
Sbjct: 418 PRILDTLRTHHVSQISTGLYHTVVITSRGQIFGFGDNERAQLGHDTLRSCLEPTEIFIKD 477

Query: 481 MEED 484
           + ED
Sbjct: 478 VSED 481


>gi|255646519|gb|ACU23737.1| unknown [Glycine max]
          Length = 485

 Score =  792 bits (2045), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 386/484 (79%), Positives = 424/484 (87%), Gaps = 3/484 (0%)

Query: 1   MADRYRLFSIEELPSHLIFEILTSGRLSAVDLAHLELTSKTFGGSHGLYPQKFRSLVDLA 60
           M +R R FSIEELPSHL+ EIL SGRLSA+DL  LELTSKTFGGSHGL+P KF+SLV  A
Sbjct: 1   MGERCRHFSIEELPSHLVLEILCSGRLSAMDLVCLELTSKTFGGSHGLHPFKFKSLVAFA 60

Query: 61  ASQLCALHSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNMQITTGR 120
           A QLCA H  YA M  N Q EL +RC GNWKRVLRFLQSVE SS +VETS+GNMQITTG+
Sbjct: 61  AFQLCASHVTYARMGLNSQRELYDRCGGNWKRVLRFLQSVEQSSQMVETSSGNMQITTGK 120

Query: 121 YHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
           YHTLLISNSSV+SCGS LCGVLG G ETTQCV+FTRI+FP  A VV VSAS NHAAFV+Q
Sbjct: 121 YHTLLISNSSVYSCGSGLCGVLGQGSETTQCVAFTRIDFPPLARVVHVSASFNHAAFVMQ 180

Query: 181 SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTC 240
           SG+VFTCGDNSS CCGHRDT RPIF+PRLVE+LKG+PCKQV AGLNFT FLT +GHV+TC
Sbjct: 181 SGEVFTCGDNSSSCCGHRDTTRPIFKPRLVESLKGIPCKQVAAGLNFTVFLTRKGHVYTC 240

Query: 241 GSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 300
           G+NTHGQLGHGDT DRPTPK I   E + SVVQIAAGPSY+L+VT NG VYSFGSG+NFC
Sbjct: 241 GTNTHGQLGHGDTQDRPTPKMI---EVLSSVVQIAAGPSYILSVTENGTVYSFGSGANFC 297

Query: 301 LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 360
           LGHGEQHDELQPRAIQ FRRKGIH+VRVSAGDEH VALDS+GYVYTWGKGYCGALGHGDE
Sbjct: 298 LGHGEQHDELQPRAIQKFRRKGIHIVRVSAGDEHAVALDSNGYVYTWGKGYCGALGHGDE 357

Query: 361 IDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLR 420
           I+KT PE L+SLK+ L VQVCARKRKTFVLVD+GSVYGFG MGFGSLGF DR VS KVL+
Sbjct: 358 IEKTTPELLTSLKNQLVVQVCARKRKTFVLVDSGSVYGFGSMGFGSLGFLDRRVSGKVLK 417

Query: 421 PRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQE 480
           PRILD+LR HHVSQISTGLYHTVV+T RG++FGFGDNERAQLGHD LR CLEPTEIFI++
Sbjct: 418 PRILDTLRTHHVSQISTGLYHTVVITSRGQIFGFGDNERAQLGHDILRSCLEPTEIFIKD 477

Query: 481 MEED 484
           + ED
Sbjct: 478 VFED 481


>gi|356544020|ref|XP_003540454.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2-like [Glycine
           max]
          Length = 485

 Score =  792 bits (2045), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 386/484 (79%), Positives = 424/484 (87%), Gaps = 3/484 (0%)

Query: 1   MADRYRLFSIEELPSHLIFEILTSGRLSAVDLAHLELTSKTFGGSHGLYPQKFRSLVDLA 60
           M DR R FSIEELPSHL+ EIL SGRLSA+DL  LELTSKTFGGSHGL+P KF+SLVD A
Sbjct: 1   MGDRCRHFSIEELPSHLVLEILCSGRLSAMDLVCLELTSKTFGGSHGLHPFKFKSLVDFA 60

Query: 61  ASQLCALHSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNMQITTGR 120
           A QLCA H  +A M  N Q EL +RC GNWKRVLRFLQSVE SS +VETS GNMQITTG+
Sbjct: 61  AFQLCASHVTFARMGLNSQRELYDRCGGNWKRVLRFLQSVEQSSQMVETSLGNMQITTGK 120

Query: 121 YHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
           YHTLLISNSSV+SCGS LCGVLG G ETTQCV+FTRI+ P    VV VSAS NHAAFV+Q
Sbjct: 121 YHTLLISNSSVYSCGSGLCGVLGQGSETTQCVAFTRIDSPPLPRVVHVSASFNHAAFVMQ 180

Query: 181 SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTC 240
           SG+VFTCGDNSS CCGHRDT RPIFRPRLVE+LKG+PCKQV AGLNFT FLT +GHV+TC
Sbjct: 181 SGEVFTCGDNSSSCCGHRDTTRPIFRPRLVESLKGIPCKQVAAGLNFTVFLTRQGHVYTC 240

Query: 241 GSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 300
           G+NTHGQLGHGDT DRPTPK I   E + SVVQIAAGPSY+L+VT NG VYSFGSG+NFC
Sbjct: 241 GTNTHGQLGHGDTQDRPTPKMI---EVLSSVVQIAAGPSYILSVTENGTVYSFGSGANFC 297

Query: 301 LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 360
           LGHGEQHDELQPR IQ FRRKGIH+VRVSAGDEH VALDS+G+VYTWGKGYCGALGHGDE
Sbjct: 298 LGHGEQHDELQPRPIQKFRRKGIHIVRVSAGDEHAVALDSNGFVYTWGKGYCGALGHGDE 357

Query: 361 IDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLR 420
           I+KT PE L+SLK+ LAVQVCARKRKTFVLV++GSVYGFG MGFGSLGF DR VSDKVL+
Sbjct: 358 IEKTTPELLTSLKNQLAVQVCARKRKTFVLVNSGSVYGFGSMGFGSLGFLDRRVSDKVLK 417

Query: 421 PRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQE 480
           PRILD+LRAHHVSQISTGLYHTVV+T RG++FGFGDNERAQLGHDTLR CLEPT+IFI++
Sbjct: 418 PRILDTLRAHHVSQISTGLYHTVVITSRGQIFGFGDNERAQLGHDTLRSCLEPTQIFIKD 477

Query: 481 MEED 484
             ED
Sbjct: 478 TSED 481


>gi|449446943|ref|XP_004141229.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2-like [Cucumis
           sativus]
          Length = 491

 Score =  771 bits (1992), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 371/485 (76%), Positives = 418/485 (86%)

Query: 1   MADRYRLFSIEELPSHLIFEILTSGRLSAVDLAHLELTSKTFGGSHGLYPQKFRSLVDLA 60
           MA      +  +LPSHLI E+LTSGRL+A DL  LELT K FGGSH LYP KFRSLVD A
Sbjct: 1   MAKWLHSTTFVDLPSHLILEVLTSGRLNAHDLVCLELTCKLFGGSHELYPLKFRSLVDFA 60

Query: 61  ASQLCALHSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNMQITTGR 120
           A QLC  HS Y+GM  + Q +L +RC G WKRV RFLQ VE SS+IVETS GNMQI TGR
Sbjct: 61  AFQLCISHSTYSGMGEDSQRQLFDRCQGKWKRVFRFLQLVEKSSNIVETSEGNMQIATGR 120

Query: 121 YHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
           YHTLLISN SV+SCGSSLCGVLGHG ETTQCV+FTRINFP + +V QVSAS NHAAFV Q
Sbjct: 121 YHTLLISNGSVYSCGSSLCGVLGHGSETTQCVTFTRINFPPSIYVEQVSASHNHAAFVTQ 180

Query: 181 SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTC 240
           SGQVFTCGDNSSFCCGHRDT+  IFRPRLVEAL G+PCKQV+ G NF+ FLT +GHV+TC
Sbjct: 181 SGQVFTCGDNSSFCCGHRDTSCRIFRPRLVEALNGIPCKQVSVGHNFSVFLTRQGHVYTC 240

Query: 241 GSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 300
           G+NT+GQLGHG+TL+ PTPK +  L E+GSV+QIAAGPSY+LAV  +G VYSFGSGSNFC
Sbjct: 241 GTNTYGQLGHGNTLEGPTPKIVQRLVEIGSVIQIAAGPSYVLAVVNDGRVYSFGSGSNFC 300

Query: 301 LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 360
           LGHGEQH+E QPR +QTFR K IHVV VSAGDEH VALDS+G VYTWGKGYCGALGHGDE
Sbjct: 301 LGHGEQHNEFQPRVLQTFRLKNIHVVSVSAGDEHAVALDSNGLVYTWGKGYCGALGHGDE 360

Query: 361 IDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLR 420
           IDKT+P+PL+SLK+HLAVQVCARKRKTFVLVDTG VYGFGWMGFGSLGFPDRGVSDKVLR
Sbjct: 361 IDKTIPQPLNSLKNHLAVQVCARKRKTFVLVDTGIVYGFGWMGFGSLGFPDRGVSDKVLR 420

Query: 421 PRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQE 480
           PR LDSLR H VSQISTGLYHTVVVT++G++FGFGDNERAQLGH++LRGCLEPTEIFI +
Sbjct: 421 PRSLDSLRVHRVSQISTGLYHTVVVTEKGKIFGFGDNERAQLGHESLRGCLEPTEIFIHD 480

Query: 481 MEEDT 485
           +++++
Sbjct: 481 LDDES 485


>gi|18400769|ref|NP_566512.1| regulator of chromosome condensation repeat-containing protein
           [Arabidopsis thaliana]
 gi|42572455|ref|NP_974323.1| regulator of chromosome condensation repeat-containing protein
           [Arabidopsis thaliana]
 gi|7021728|gb|AAF35409.1| unknown protein [Arabidopsis thaliana]
 gi|15795108|dbj|BAB02372.1| unnamed protein product [Arabidopsis thaliana]
 gi|23297250|gb|AAN12924.1| unknown protein [Arabidopsis thaliana]
 gi|332642152|gb|AEE75673.1| regulator of chromosome condensation repeat-containing protein
           [Arabidopsis thaliana]
 gi|332642153|gb|AEE75674.1| regulator of chromosome condensation repeat-containing protein
           [Arabidopsis thaliana]
          Length = 488

 Score =  758 bits (1957), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 362/478 (75%), Positives = 403/478 (84%)

Query: 1   MADRYRLFSIEELPSHLIFEILTSGRLSAVDLAHLELTSKTFGGSHGLYPQKFRSLVDLA 60
           MADR  L S E+LPSHLI E+LTSGRLSAVDL  LELTSK FGGSHG YP KFRSL D A
Sbjct: 1   MADRNCLISFEDLPSHLILEVLTSGRLSAVDLLSLELTSKVFGGSHGFYPLKFRSLADYA 60

Query: 61  ASQLCALHSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNMQITTGR 120
           ASQLC++H +Y GM    Q EL   C GNWKR+  FLQSVE SSD+VETS G MQI TG+
Sbjct: 61  ASQLCSMHPVYVGMGLTTQKELFANCEGNWKRLFSFLQSVEQSSDMVETSQGKMQIATGK 120

Query: 121 YHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
           YHTLLI+NS V+SCG SL GVL HG ETTQCV+FT I FP  A V QVSA++NH+AFVLQ
Sbjct: 121 YHTLLINNSKVYSCGVSLSGVLAHGSETTQCVAFTPIEFPFPAQVAQVSATQNHSAFVLQ 180

Query: 181 SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTC 240
           SGQV TCGDNSS CCGH DT+RPIFRP+LVEALKG PCKQV AGL+FT FL+  GH +TC
Sbjct: 181 SGQVLTCGDNSSHCCGHLDTSRPIFRPKLVEALKGTPCKQVAAGLHFTVFLSREGHAYTC 240

Query: 241 GSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 300
           GSNTHGQLGHGDTLDRP PK +  L+ +G VVQIAAGPSY+LAVT +G VYSFGSGSNFC
Sbjct: 241 GSNTHGQLGHGDTLDRPVPKVVEFLKTIGPVVQIAAGPSYVLAVTQDGSVYSFGSGSNFC 300

Query: 301 LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 360
           LGHGEQ DELQPR IQ F+RKGIH++RVSAGDEH VALDS+G VYTWGKGYCGALGHGDE
Sbjct: 301 LGHGEQQDELQPRVIQAFKRKGIHILRVSAGDEHAVALDSNGRVYTWGKGYCGALGHGDE 360

Query: 361 IDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLR 420
            DK  P+ L +L + LAVQVCARKRKTFVLV+ G +YGFGWMGFGSLGFPDRGVSDKVLR
Sbjct: 361 NDKITPQVLVNLNNCLAVQVCARKRKTFVLVEGGLLYGFGWMGFGSLGFPDRGVSDKVLR 420

Query: 421 PRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFI 478
           PR+L+ L+ H VSQ+STGLYHT+VVT RGR+FGFGDNERAQLGHD+LRGCLEPTEIF+
Sbjct: 421 PRVLECLKPHRVSQVSTGLYHTIVVTQRGRIFGFGDNERAQLGHDSLRGCLEPTEIFL 478


>gi|14334416|gb|AAK59406.1| unknown protein [Arabidopsis thaliana]
          Length = 488

 Score =  757 bits (1954), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 361/478 (75%), Positives = 403/478 (84%)

Query: 1   MADRYRLFSIEELPSHLIFEILTSGRLSAVDLAHLELTSKTFGGSHGLYPQKFRSLVDLA 60
           MADR  L S E+LPSHLI E+LTSGRLSAVDL  LELTSK FGGSHG YP KFRSL D A
Sbjct: 1   MADRNCLISFEDLPSHLILEVLTSGRLSAVDLLSLELTSKVFGGSHGFYPLKFRSLADYA 60

Query: 61  ASQLCALHSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNMQITTGR 120
           ASQLC++H +Y GM    Q EL   C GNWKR+  FLQSVE SSD+VETS G MQI TG+
Sbjct: 61  ASQLCSMHPVYVGMGLTTQKELFANCEGNWKRLFSFLQSVEQSSDMVETSQGKMQIATGK 120

Query: 121 YHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
           YHTLLI+NS V+SCG SL GVL HG ETTQCV+FT I FP  A V QVSA++NH+AFVLQ
Sbjct: 121 YHTLLINNSKVYSCGVSLSGVLAHGSETTQCVAFTPIEFPFPAQVAQVSATQNHSAFVLQ 180

Query: 181 SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTC 240
           SGQV TCGDNSS CCGH DT+RPIFRP+LVEALKG PCKQV AGL+FT FL+  GH +TC
Sbjct: 181 SGQVLTCGDNSSHCCGHLDTSRPIFRPKLVEALKGTPCKQVAAGLHFTVFLSREGHAYTC 240

Query: 241 GSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 300
           GSNTHGQLGHGDTLDRP PK +  L+ +G VVQIAAGPSY+LA+T +G VYSFGSGSNFC
Sbjct: 241 GSNTHGQLGHGDTLDRPVPKVVEFLKTIGPVVQIAAGPSYVLALTQDGSVYSFGSGSNFC 300

Query: 301 LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 360
           LGHGEQ DELQPR IQ F+RKGIH++RVSAGDEH VALDS+G VYTWGKGYCGALGHGDE
Sbjct: 301 LGHGEQQDELQPRVIQAFKRKGIHILRVSAGDEHAVALDSNGRVYTWGKGYCGALGHGDE 360

Query: 361 IDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLR 420
            DK  P+ L +L + LAVQVCARKRKTFVLV+ G +YGFGWMGFGSLGFPDRGVSDKVLR
Sbjct: 361 NDKITPQVLVNLNNCLAVQVCARKRKTFVLVEGGLLYGFGWMGFGSLGFPDRGVSDKVLR 420

Query: 421 PRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFI 478
           PR+L+ L+ H VSQ+STGLYHT+VVT RGR+FGFGDNERAQLGHD+LRGCLEPTEIF+
Sbjct: 421 PRVLECLKPHRVSQVSTGLYHTIVVTQRGRIFGFGDNERAQLGHDSLRGCLEPTEIFL 478


>gi|297830122|ref|XP_002882943.1| regulator of chromosome condensation family protein [Arabidopsis
           lyrata subsp. lyrata]
 gi|297328783|gb|EFH59202.1| regulator of chromosome condensation family protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 488

 Score =  756 bits (1952), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 359/478 (75%), Positives = 404/478 (84%)

Query: 1   MADRYRLFSIEELPSHLIFEILTSGRLSAVDLAHLELTSKTFGGSHGLYPQKFRSLVDLA 60
           MADR  L S E+LPSHLI E+LTSG+LSAVDL  LELTSK FGGSHG YP KFRSL D A
Sbjct: 1   MADRNWLISFEDLPSHLILEVLTSGKLSAVDLLSLELTSKVFGGSHGFYPLKFRSLADYA 60

Query: 61  ASQLCALHSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNMQITTGR 120
           ASQLC++H +Y GM    Q EL   C GNWKR+L FLQSVE SSD+VETS G MQI TG+
Sbjct: 61  ASQLCSMHPVYVGMGLTTQKELFANCEGNWKRLLSFLQSVEQSSDMVETSQGKMQIATGK 120

Query: 121 YHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
           YHTLLI+NS V+SCG SL GVL HGPETTQCV+FT I FP  A V QVSA++NH+AFVLQ
Sbjct: 121 YHTLLINNSKVYSCGVSLSGVLAHGPETTQCVAFTPIEFPFPAQVAQVSATQNHSAFVLQ 180

Query: 181 SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTC 240
           SG+V TCGDNSS CCGH DT+RPIFRP+LVE LKG PCKQV AGL+FT FL+  GH +TC
Sbjct: 181 SGEVLTCGDNSSHCCGHLDTSRPIFRPKLVEVLKGTPCKQVAAGLHFTVFLSREGHAYTC 240

Query: 241 GSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 300
           GSNTHGQLGHGDT+DRP PK +  L+ +G VVQIAAGPSY+LAVT +G VYSFGSGSNFC
Sbjct: 241 GSNTHGQLGHGDTMDRPAPKVVEFLKNIGPVVQIAAGPSYVLAVTQDGSVYSFGSGSNFC 300

Query: 301 LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 360
           LGHGEQ DELQPR IQ F+RKGIH++RVSAGDEH VALDS+G VYTWGKGYCGALGHGDE
Sbjct: 301 LGHGEQQDELQPRVIQAFKRKGIHILRVSAGDEHAVALDSNGRVYTWGKGYCGALGHGDE 360

Query: 361 IDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLR 420
            DK  P+ L +LK+ LAVQVCARKRKTFVLV+ G +YGFGWMGFGSLGFPDRGVSDKVLR
Sbjct: 361 NDKITPQVLVNLKNCLAVQVCARKRKTFVLVEGGLLYGFGWMGFGSLGFPDRGVSDKVLR 420

Query: 421 PRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFI 478
           PR+L+ L+ H VSQ+STGLYHT+VVT  GR+FGFGDNERAQLGH++LRGCLEPTEIF+
Sbjct: 421 PRVLECLKPHRVSQVSTGLYHTIVVTQGGRIFGFGDNERAQLGHNSLRGCLEPTEIFL 478


>gi|218199547|gb|EEC81974.1| hypothetical protein OsI_25886 [Oryza sativa Indica Group]
          Length = 907

 Score =  669 bits (1727), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 327/483 (67%), Positives = 384/483 (79%), Gaps = 11/483 (2%)

Query: 6   RLFSIEELPSHLIFEILTSGRLSAVDLAHLELTSKTFGGSHGLYPQKFRSLVDLAASQLC 65
           R FS+EELP HLI E+LTSGRL+A DLA LE T +             R L + AAS+LC
Sbjct: 9   RAFSMEELPGHLIGEVLTSGRLAAGDLARLEATCRAL-----------RPLAEHAASRLC 57

Query: 66  ALHSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLL 125
           A  + +A M    + ELL RC G+WK+VLRFLQSVE SS  V TS+GNMQ+ TGRYHTLL
Sbjct: 58  AARAAFAAMGPAARGELLERCGGSWKKVLRFLQSVEQSSGTVHTSSGNMQVATGRYHTLL 117

Query: 126 ISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVF 185
           + +SSV+SCGSSLCGVLGHGP+TTQC +F+R+ FPS + VV +SAS NHAAFV + G+VF
Sbjct: 118 VHDSSVYSCGSSLCGVLGHGPDTTQCAAFSRVPFPSLSRVVNISASHNHAAFVTELGEVF 177

Query: 186 TCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTH 245
           TCGDNSS CCGH +  R IFRP  ++ALKG+ CKQV  GL+FT  LT  G V+TCGSNTH
Sbjct: 178 TCGDNSSLCCGHGEVGRTIFRPTEIKALKGISCKQVATGLSFTVILTTDGQVYTCGSNTH 237

Query: 246 GQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGE 305
           GQLGHGDT+DR TPK +   E +  VVQ+AAG SY  AVT +G VYSFGS +NFCLGHG+
Sbjct: 238 GQLGHGDTIDRATPKIVELFEGLAPVVQVAAGASYTFAVTDDGTVYSFGSCTNFCLGHGD 297

Query: 306 QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTL 365
           QHDEL+PRAIQ+F+R+ IHVVRVSAGDEH VALD+ GYVYTWG+GYCGALGHGDE DKT 
Sbjct: 298 QHDELRPRAIQSFKRRNIHVVRVSAGDEHAVALDALGYVYTWGRGYCGALGHGDENDKTS 357

Query: 366 PEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILD 425
           PE +SSLKS +AVQVCARKRKTFVL D GSV+ FGWMGFGSLGFPDRG SDKV+RPR+LD
Sbjct: 358 PELISSLKSQVAVQVCARKRKTFVLTDEGSVFAFGWMGFGSLGFPDRGSSDKVMRPRVLD 417

Query: 426 SLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQEMEEDT 485
           SLR H+VSQISTGLYHTV VT+RG +FGFGDNERAQLG + +RGCL+PTEI  Q+  E+ 
Sbjct: 418 SLRDHYVSQISTGLYHTVAVTNRGIVFGFGDNERAQLGQEYIRGCLKPTEIMFQKSMEEI 477

Query: 486 GLA 488
            +A
Sbjct: 478 VIA 480


>gi|115471953|ref|NP_001059575.1| Os07g0459400 [Oryza sativa Japonica Group]
 gi|28564665|dbj|BAC57847.1| putative UVB-resistance protein UVR8 [Oryza sativa Japonica Group]
 gi|113611111|dbj|BAF21489.1| Os07g0459400 [Oryza sativa Japonica Group]
 gi|215678781|dbj|BAG95218.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 484

 Score =  669 bits (1727), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 327/483 (67%), Positives = 384/483 (79%), Gaps = 11/483 (2%)

Query: 6   RLFSIEELPSHLIFEILTSGRLSAVDLAHLELTSKTFGGSHGLYPQKFRSLVDLAASQLC 65
           R FS+EELP HLI E+LTSGRL+A DLA LE T +             R L + AAS+LC
Sbjct: 9   RAFSMEELPGHLIGEVLTSGRLAAGDLARLEATCRAL-----------RPLAEHAASRLC 57

Query: 66  ALHSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLL 125
           A  + +A M    + ELL RC G+WK+VLRFLQSVE SS  V TS+GNMQ+ TGRYHTLL
Sbjct: 58  AARAAFAAMGPAARGELLERCGGSWKKVLRFLQSVEQSSGTVHTSSGNMQVATGRYHTLL 117

Query: 126 ISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVF 185
           + +SSV+SCGSSLCGVLGHGP+TTQC +F+R+ FPS + VV +SAS NHAAFV + G+VF
Sbjct: 118 VHDSSVYSCGSSLCGVLGHGPDTTQCAAFSRVPFPSLSRVVNISASHNHAAFVTELGEVF 177

Query: 186 TCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTH 245
           TCGDNSS CCGH +  R IFRP  ++ALKG+ CKQV  GL+FT  LT  G V+TCGSNTH
Sbjct: 178 TCGDNSSLCCGHGEVGRTIFRPTEIKALKGISCKQVATGLSFTVILTTDGQVYTCGSNTH 237

Query: 246 GQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGE 305
           GQLGHGDT+DR TPK +   E +  VVQ+AAG SY  AVT +G VYSFGS +NFCLGHG+
Sbjct: 238 GQLGHGDTIDRATPKIVELFEGLAPVVQVAAGASYTFAVTDDGTVYSFGSCTNFCLGHGD 297

Query: 306 QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTL 365
           QHDEL+PRAIQ+F+R+ IHVVRVSAGDEH VALD+ GYVYTWG+GYCGALGHGDE DKT 
Sbjct: 298 QHDELRPRAIQSFKRRNIHVVRVSAGDEHAVALDALGYVYTWGRGYCGALGHGDENDKTS 357

Query: 366 PEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILD 425
           PE +SSLKS +AVQVCARKRKTFVL D GSV+ FGWMGFGSLGFPDRG SDKV+RPR+LD
Sbjct: 358 PELISSLKSQVAVQVCARKRKTFVLTDEGSVFAFGWMGFGSLGFPDRGSSDKVMRPRVLD 417

Query: 426 SLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQEMEEDT 485
           SLR H+VSQISTGLYHTV VT+RG +FGFGDNERAQLG + +RGCL+PTEI  Q+  E+ 
Sbjct: 418 SLRDHYVSQISTGLYHTVAVTNRGIVFGFGDNERAQLGQEYIRGCLKPTEIMFQKSMEEI 477

Query: 486 GLA 488
            +A
Sbjct: 478 VIA 480


>gi|222636984|gb|EEE67116.1| hypothetical protein OsJ_24138 [Oryza sativa Japonica Group]
          Length = 484

 Score =  665 bits (1717), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 326/483 (67%), Positives = 383/483 (79%), Gaps = 11/483 (2%)

Query: 6   RLFSIEELPSHLIFEILTSGRLSAVDLAHLELTSKTFGGSHGLYPQKFRSLVDLAASQLC 65
           R FS+EELP HLI E+LTSGRL+A DLA LE T +             R L + AAS+L 
Sbjct: 9   RAFSMEELPGHLIGEVLTSGRLAAGDLARLEATCRAL-----------RPLAEHAASRLW 57

Query: 66  ALHSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLL 125
           A  + +A M    + ELL RC G+WK+VLRFLQSVE SS  V TS+GNMQ+ TGRYHTLL
Sbjct: 58  AARAAFAAMGPAARGELLERCGGSWKKVLRFLQSVEQSSGTVHTSSGNMQVATGRYHTLL 117

Query: 126 ISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVF 185
           + +SSV+SCGSSLCGVLGHGP+TTQC +F+R+ FPS + VV +SAS NHAAFV + G+VF
Sbjct: 118 VHDSSVYSCGSSLCGVLGHGPDTTQCAAFSRVPFPSLSRVVNISASHNHAAFVTELGEVF 177

Query: 186 TCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTH 245
           TCGDNSS CCGH +  R IFRP  ++ALKG+ CKQV  GL+FT  LT  G V+TCGSNTH
Sbjct: 178 TCGDNSSLCCGHGEVGRTIFRPTEIKALKGISCKQVATGLSFTVILTTDGQVYTCGSNTH 237

Query: 246 GQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGE 305
           GQLGHGDT+DR TPK +   E +  VVQ+AAG SY  AVT +G VYSFGS +NFCLGHG+
Sbjct: 238 GQLGHGDTIDRATPKIVELFEGLAPVVQVAAGASYTFAVTDDGTVYSFGSCTNFCLGHGD 297

Query: 306 QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTL 365
           QHDEL+PRAIQ+F+R+ IHVVRVSAGDEH VALD+ GYVYTWG+GYCGALGHGDE DKT 
Sbjct: 298 QHDELRPRAIQSFKRRNIHVVRVSAGDEHAVALDALGYVYTWGRGYCGALGHGDENDKTS 357

Query: 366 PEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILD 425
           PE +SSLKS +AVQVCARKRKTFVL D GSV+ FGWMGFGSLGFPDRG SDKV+RPR+LD
Sbjct: 358 PELISSLKSQVAVQVCARKRKTFVLTDEGSVFAFGWMGFGSLGFPDRGSSDKVMRPRVLD 417

Query: 426 SLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQEMEEDT 485
           SLR H+VSQISTGLYHTV VT+RG +FGFGDNERAQLG + +RGCL+PTEI  Q+  E+ 
Sbjct: 418 SLRDHYVSQISTGLYHTVAVTNRGIVFGFGDNERAQLGQEYIRGCLKPTEIMFQKSMEEI 477

Query: 486 GLA 488
            +A
Sbjct: 478 VIA 480


>gi|293332153|ref|NP_001168691.1| putative regulator of chromosome condensation (RCC1) family protein
           [Zea mays]
 gi|223950263|gb|ACN29215.1| unknown [Zea mays]
 gi|414884497|tpg|DAA60511.1| TPA: putative regulator of chromosome condensation (RCC1) family
           protein [Zea mays]
          Length = 483

 Score =  661 bits (1705), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 326/483 (67%), Positives = 381/483 (78%), Gaps = 11/483 (2%)

Query: 6   RLFSIEELPSHLIFEILTSGRLSAVDLAHLELTSKTFGGSHGLYPQKFRSLVDLAASQLC 65
           R FSIEELP HLI E+LTSG L+A DLA LE T +             R L + AAS+LC
Sbjct: 8   RAFSIEELPGHLIGEVLTSGGLAAADLARLEATCRAL-----------RPLAEYAASKLC 56

Query: 66  ALHSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLL 125
           A  + +A M    + ELL RC G+WKRVLRFLQSVE SS  VETS+G+MQ+ TGRYHTLL
Sbjct: 57  AARAAFAAMGPAARGELLERCGGSWKRVLRFLQSVEQSSGTVETSSGSMQVATGRYHTLL 116

Query: 126 ISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVF 185
           + +SSV+SCGSSLCGVLGHGP+TTQC +F+R++FPS + V+ +SAS NHAAFV +SG+VF
Sbjct: 117 VHDSSVYSCGSSLCGVLGHGPDTTQCAAFSRVSFPSLSRVINISASHNHAAFVTESGEVF 176

Query: 186 TCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTH 245
           TCGDNSS CCGH +  R IFRP  VEALKG+PCKQV  GL+FT  LT  G V+TCGSNTH
Sbjct: 177 TCGDNSSLCCGHGEVGRTIFRPMQVEALKGIPCKQVATGLSFTVILTRDGQVYTCGSNTH 236

Query: 246 GQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGE 305
           GQLGHGDT+DR TPK I   E    VVQIAAG SY  AVT +G V+SFGS +NFCLGHG+
Sbjct: 237 GQLGHGDTIDRATPKLIELFEGPTQVVQIAAGASYTFAVTDDGTVHSFGSCTNFCLGHGD 296

Query: 306 QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTL 365
           QHDEL PRAIQ+F+R+ IHVVRVSAGDEH VALD+ G+VYTWG+GYCGALGHGDE DKT 
Sbjct: 297 QHDELLPRAIQSFKRRNIHVVRVSAGDEHAVALDALGHVYTWGRGYCGALGHGDENDKTS 356

Query: 366 PEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILD 425
           PE + SLK  +AVQVCARKRKTFVL D GSV  FGWMGFGSLGF DRG SDKV+RPR+L+
Sbjct: 357 PELIGSLKGQVAVQVCARKRKTFVLTDEGSVVAFGWMGFGSLGFLDRGTSDKVMRPRVLE 416

Query: 426 SLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQEMEEDT 485
           SL+ H+VSQISTGLYHTV VT++G +FGFGDNERAQLG + +RGCL+PTEI  Q+  ED 
Sbjct: 417 SLQDHYVSQISTGLYHTVAVTNKGIVFGFGDNERAQLGQEYIRGCLKPTEIMFQKSIEDI 476

Query: 486 GLA 488
            +A
Sbjct: 477 PIA 479


>gi|357122920|ref|XP_003563161.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Brachypodium
           distachyon]
          Length = 485

 Score =  660 bits (1702), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 323/484 (66%), Positives = 378/484 (78%), Gaps = 12/484 (2%)

Query: 6   RLFSIEELPSHLIFEILTSGRLSAVDLAHLELTSKTFGGSHGLYPQKFRSLVDLAASQLC 65
           R FS+EELP HLI E+LTSGRL+A DLA LE T +             R L + AAS+LC
Sbjct: 8   RAFSMEELPGHLIGEVLTSGRLAAGDLARLEATCRAL-----------RPLAEHAASRLC 56

Query: 66  ALHSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLL 125
              + +A M    + ELL RC G+WK+VLRFLQSVE SSD VETS+GNMQ+ TGRYHTLL
Sbjct: 57  EARTAFAVMGPAARGELLARCGGSWKKVLRFLQSVEQSSDTVETSSGNMQVATGRYHTLL 116

Query: 126 ISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVF 185
           + +SSV+SCGSSLCGVLGHGP+TTQCV+F+R++FP+ + VV +SA  NHAAFV ++GQVF
Sbjct: 117 VHDSSVYSCGSSLCGVLGHGPDTTQCVAFSRVSFPALSRVVNISAFHNHAAFVTETGQVF 176

Query: 186 TCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTH 245
           TCGDNSS CCGH D  R IFRP  +EALKG  CKQV  GL+FT  LT  G V+TCGSNTH
Sbjct: 177 TCGDNSSLCCGHGDVGRTIFRPTQIEALKGTFCKQVATGLSFTVILTREGQVYTCGSNTH 236

Query: 246 GQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGE 305
           GQLGHGDT+DR  PK I   E    VVQ+AAG SY  AVT +G V+SFGS +NFCLGHG+
Sbjct: 237 GQLGHGDTIDRAAPKIIELFEGSSPVVQVAAGASYTFAVTDDGTVHSFGSCTNFCLGHGD 296

Query: 306 QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTL 365
           QH+EL PRAIQ+F+R+ IHVVRVSAGDEH VALD+ GYVYTWG+GYCGALGHGDE DKT 
Sbjct: 297 QHNELLPRAIQSFKRRNIHVVRVSAGDEHAVALDALGYVYTWGRGYCGALGHGDENDKTS 356

Query: 366 PEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILD 425
           PE + SLK  +AVQVCARKRKTFVL D GSV  FGWMGFGSLGFPDR  SDKV++P +LD
Sbjct: 357 PELIGSLKGQVAVQVCARKRKTFVLTDEGSVVAFGWMGFGSLGFPDRESSDKVMKPCVLD 416

Query: 426 SLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI-FIQEMEED 484
           SLR H+VSQISTGLYHTV VT++G +FGFGDNERAQLG + +RGCL+PTEI F +   ED
Sbjct: 417 SLRGHYVSQISTGLYHTVAVTNKGIVFGFGDNERAQLGQEYIRGCLKPTEIMFHKSSMED 476

Query: 485 TGLA 488
             +A
Sbjct: 477 IAIA 480


>gi|414589113|tpg|DAA39684.1| TPA: putative regulator of chromosome condensation (RCC1) family
           protein [Zea mays]
          Length = 371

 Score =  435 bits (1118), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 220/346 (63%), Positives = 262/346 (75%), Gaps = 11/346 (3%)

Query: 6   RLFSIEELPSHLIFEILTSGRLSAVDLAHLELTSKTFGGSHGLYPQKFRSLVDLAASQLC 65
           R F IEELP HLI E+LTSG L+A DLA LE T +             R L + AAS+LC
Sbjct: 8   RAFPIEELPGHLIGEVLTSGGLAAADLARLEATCRAL-----------RPLAEYAASKLC 56

Query: 66  ALHSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLL 125
           A  + +A M    +  LL RC G+WK+VLRFLQSVE SS  VET++G+MQ+ TGRYHTLL
Sbjct: 57  AARAAFAAMGPAARGGLLERCGGSWKKVLRFLQSVEQSSGTVETTSGSMQVATGRYHTLL 116

Query: 126 ISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVF 185
           + +SSV+SCGSSLCGVLGHGP+TTQC +F+R++FPS + V+ +SAS NHAAFVL+SG+VF
Sbjct: 117 VHDSSVYSCGSSLCGVLGHGPDTTQCAAFSRVSFPSLSCVINISASHNHAAFVLESGEVF 176

Query: 186 TCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTH 245
           TCGDNSS CCGH +  R IFRP  VEALKG+PCKQV  GL+FT  LT  G V+TCGSNTH
Sbjct: 177 TCGDNSSLCCGHGEVGRTIFRPMQVEALKGIPCKQVATGLSFTVILTRDGQVYTCGSNTH 236

Query: 246 GQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGE 305
           GQLGHGDT+DR TPK I   E    VVQIAAG SY  AVT +G V+SFGS +NFCLGHG+
Sbjct: 237 GQLGHGDTIDRATPKLIELFEGSTPVVQIAAGASYTFAVTDDGTVHSFGSCTNFCLGHGD 296

Query: 306 QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 351
           QHDEL PRAIQ+F+ + IHVVRVSAGDEH VALD+ GYV+  G+ Y
Sbjct: 297 QHDELLPRAIQSFKWRNIHVVRVSAGDEHAVALDALGYVWCSGERY 342



 Score = 94.7 bits (234), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 74/223 (33%), Positives = 109/223 (48%), Gaps = 7/223 (3%)

Query: 237 VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 296
           V++CGS+  G LGHG    +    S      +  V+ I+A  ++   V  +G V++ G  
Sbjct: 122 VYSCGSSLCGVLGHGPDTTQCAAFSRVSFPSLSCVINISASHNHAAFVLESGEVFTCGDN 181

Query: 297 SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 356
           S+ C GHGE    +  R +Q    KGI   +V+ G    V L   G VYT G    G LG
Sbjct: 182 SSLCCGHGEVGRTIF-RPMQVEALKGIPCKQVATGLSFTVILTRDGQVYTCGSNTHGQLG 240

Query: 357 HGDEIDKTLPEPLSSLK-SHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVS 415
           HGD ID+  P+ +   + S   VQ+ A    TF + D G+V+ FG      LG  D+   
Sbjct: 241 HGDTIDRATPKLIELFEGSTPVVQIAAGASYTFAVTDDGTVHSFGSCTNFCLGHGDQ--H 298

Query: 416 DKVLRPRILDSL--RAHHVSQISTGLYHTVVVTDRGRLFGFGD 456
           D++L PR + S   R  HV ++S G  H V +   G ++  G+
Sbjct: 299 DELL-PRAIQSFKWRNIHVVRVSAGDEHAVALDALGYVWCSGE 340



 Score = 58.5 bits (140), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 65/220 (29%), Positives = 93/220 (42%), Gaps = 9/220 (4%)

Query: 260 KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFR 319
           +S   +E     +Q+A G  + L V  +  VYS GS     LGHG    +    +  +F 
Sbjct: 93  QSSGTVETTSGSMQVATGRYHTLLVH-DSSVYSCGSSLCGVLGHGPDTTQCAAFSRVSFP 151

Query: 320 RKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPL--SSLKSHLA 377
                V+ +SA   H   +  SG V+T G       GHG E+ +T+  P+   +LK    
Sbjct: 152 SLSC-VINISASHNHAAFVLESGEVFTCGDNSSLCCGHG-EVGRTIFRPMQVEALKGIPC 209

Query: 378 VQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLR-AHHVSQIS 436
            QV      T +L   G VY  G    G LG  D    D+   P++++    +  V QI+
Sbjct: 210 KQVATGLSFTVILTRDGQVYTCGSNTHGQLGHGD--TIDRA-TPKLIELFEGSTPVVQIA 266

Query: 437 TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 476
            G  +T  VTD G +  FG      LGH      L P  I
Sbjct: 267 AGASYTFAVTDDGTVHSFGSCTNFCLGHGDQHDELLPRAI 306



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 44/155 (28%), Positives = 74/155 (47%), Gaps = 6/155 (3%)

Query: 326 VRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKS-HLAVQVCARK 384
           ++V+ G  H + +  S  VY+ G   CG LGHG +  +       S  S    + + A  
Sbjct: 105 MQVATGRYHTLLVHDSS-VYSCGSSLCGVLGHGPDTTQCAAFSRVSFPSLSCVINISASH 163

Query: 385 RKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV 444
                ++++G V+  G     SL      V   + RP  +++L+     Q++TGL  TV+
Sbjct: 164 NHAAFVLESGEVFTCG--DNSSLCCGHGEVGRTIFRPMQVEALKGIPCKQVATGLSFTVI 221

Query: 445 VTDRGRLFGFGDNERAQLGH-DTL-RGCLEPTEIF 477
           +T  G+++  G N   QLGH DT+ R   +  E+F
Sbjct: 222 LTRDGQVYTCGSNTHGQLGHGDTIDRATPKLIELF 256


>gi|168058994|ref|XP_001781490.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162667031|gb|EDQ53670.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 489

 Score =  399 bits (1024), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 213/477 (44%), Positives = 304/477 (63%), Gaps = 10/477 (2%)

Query: 10  IEELPSHLIFEILTSGRLSAVDLAHLELTSKTFGGSHGLYPQKFRSLVDLAASQLCALHS 69
           IE LP  ++ +IL +GRL  VDLA LE +S  F  + G+ P +F+S+ +LAA   C +H 
Sbjct: 5   IEMLPPCILQDILYNGRLGPVDLASLEASSYMFRAASGIAPYRFKSIAELAAHHSCQMHP 64

Query: 70  IYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAG-NMQITTGRYHTLLISN 128
           ++       ++ELL RC GNWK VL FL S++ SS +    +G ++ +  GRYHTLL+  
Sbjct: 65  VFENFPPRARLELLARCEGNWKLVLHFLNSLQRSSGLSVGGSGRDVLVAAGRYHTLLVDR 124

Query: 129 S-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAA-HVVQVSASENHAAFVLQSGQVFT 186
              +++CG+    VLG  P  +       I  P+AA  +VQ+SA+ NHAAFV +SGQV+T
Sbjct: 125 KGELYACGTG-GSVLGQNPAVSNLQRPASIPLPAAATRIVQISANFNHAAFVTESGQVYT 183

Query: 187 CGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHG 246
            GDN S CCG  ++ +PI +P LV  L+  PC+QV+ G  +T  LT  G + + G N+HG
Sbjct: 184 FGDNVSCCCGVGESGQPISKPTLVTTLERNPCQQVSTGQGYTVALTRNGELFSWGCNSHG 243

Query: 247 QLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ 306
           QLG G+T ++  P+ I    E   V Q++AG  + LAVT +G ++S+G GSN+CLGH + 
Sbjct: 244 QLGQGNTQEQFRPRQIEEFNESNPVAQVSAGICHTLAVTKSGQLFSWGYGSNYCLGHDDF 303

Query: 307 HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP 366
             EL+P+ ++      + ++  +AGDEH  A+DS GYVYTWGKGYCGALGHG   D+  P
Sbjct: 304 LTELRPKRVEHGGFDDLFIISAAAGDEHSAAIDSLGYVYTWGKGYCGALGHGAGTDQRTP 363

Query: 367 EPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILD- 425
             +++LKS  AVQV AR+RKTFVL D G+V+ FGWM + SLG   +  SD V+ P+ LD 
Sbjct: 364 LVVAALKSTRAVQVVARRRKTFVLGDNGTVHSFGWMAYHSLGVQGKSASDTVVSPQSLDL 423

Query: 426 SLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG-----HDTLRGCLEPTEIF 477
           +L  H VS I+ G+YHT+V+T +G +FGFGDN+ +QLG     ++T      P E+F
Sbjct: 424 ALHGHKVSTIAAGMYHTLVITRKGAIFGFGDNDSSQLGPVSVTNETPLAVRIPAEVF 480


>gi|356510726|ref|XP_003524086.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Glycine max]
          Length = 291

 Score =  348 bits (892), Expect = 5e-93,   Method: Compositional matrix adjust.
 Identities = 161/207 (77%), Positives = 183/207 (88%)

Query: 278 PSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
           PSY+L+   NG VYSFGSG+NFCLGHG+QHDELQP  IQ FRRKGIH+VR+SAGDEH VA
Sbjct: 81  PSYILSAIENGTVYSFGSGANFCLGHGDQHDELQPHPIQKFRRKGIHIVRISAGDEHAVA 140

Query: 338 LDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVY 397
           +DS+G+VYTWGKGYCGALGHGDEID T P+ L+SLK+ L VQVC RKRKTFVLV++GS+Y
Sbjct: 141 VDSNGFVYTWGKGYCGALGHGDEIDNTTPKLLTSLKNQLVVQVCVRKRKTFVLVNSGSMY 200

Query: 398 GFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDN 457
           GFG MGFGSLGF DR VSDKVL+PRILD+LRAHHVSQISTGLYHT+V+T RG +FGFGDN
Sbjct: 201 GFGSMGFGSLGFLDRRVSDKVLKPRILDTLRAHHVSQISTGLYHTMVITSRGHIFGFGDN 260

Query: 458 ERAQLGHDTLRGCLEPTEIFIQEMEED 484
           ERAQLGHDTL  CLEPT+IFI+   ED
Sbjct: 261 ERAQLGHDTLTSCLEPTQIFIKHTYED 287



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 55/184 (29%), Positives = 90/184 (48%), Gaps = 9/184 (4%)

Query: 179 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEAL--KGVPCKQVTAGLNFTGFLTIRGH 236
           +++G V++ G  ++FC GH D +  + +P  ++    KG+   +++AG      +   G 
Sbjct: 88  IENGTVYSFGSGANFCLGHGDQHDEL-QPHPIQKFRRKGIHIVRISAGDEHAVAVDSNGF 146

Query: 237 VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS- 295
           V+T G    G LGHGD +D  TPK +  L+    VVQ+         +  +G +Y FGS 
Sbjct: 147 VYTWGKGYCGALGHGDEIDNTTPKLLTSLKN-QLVVQVCVRKRKTFVLVNSGSMYGFGSM 205

Query: 296 --GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 353
             GS   L        L+PR + T R    HV ++S G  H + + S G+++ +G     
Sbjct: 206 GFGSLGFLDRRVSDKVLKPRILDTLRAH--HVSQISTGLYHTMVITSRGHIFGFGDNERA 263

Query: 354 ALGH 357
            LGH
Sbjct: 264 QLGH 267



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 43/144 (29%), Positives = 68/144 (47%), Gaps = 5/144 (3%)

Query: 114 MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           ++I+ G  H + + SN  V++ G   CG LGHG E          +  +   VVQV   +
Sbjct: 129 VRISAGDEHAVAVDSNGFVYTWGKGYCGALGHGDEIDNTTPKLLTSLKNQL-VVQVCVRK 187

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCG--HRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
                ++ SG ++  G       G   R  +  + +PR+++ L+     Q++ GL  T  
Sbjct: 188 RKTFVLVNSGSMYGFGSMGFGSLGFLDRRVSDKVLKPRILDTLRAHHVSQISTGLYHTMV 247

Query: 231 LTIRGHVHTCGSNTHGQLGHGDTL 254
           +T RGH+   G N   QLGH DTL
Sbjct: 248 ITSRGHIFGFGDNERAQLGH-DTL 270



 Score = 58.5 bits (140), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 56/193 (29%), Positives = 79/193 (40%), Gaps = 4/193 (2%)

Query: 126 ISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFP-SAAHVVQVSASENHAAFVLQSGQV 184
           I N +V+S GS     LGHG +  +        F     H+V++SA + HA  V  +G V
Sbjct: 88  IENGTVYSFGSGANFCLGHGDQHDELQPHPIQKFRRKGIHIVRISAGDEHAVAVDSNGFV 147

Query: 185 FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNT 244
           +T G       GH D       P+L+ +LK     QV      T  L   G ++  GS  
Sbjct: 148 YTWGKGYCGALGHGDEIDNT-TPKLLTSLKNQLVVQVCVRKRKTFVLVNSGSMYGFGSMG 206

Query: 245 HGQLGHGD--TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLG 302
            G LG  D    D+     I        V QI+ G  + + +T  G ++ FG      LG
Sbjct: 207 FGSLGFLDRRVSDKVLKPRILDTLRAHHVSQISTGLYHTMVITSRGHIFGFGDNERAQLG 266

Query: 303 HGEQHDELQPRAI 315
           H      L+P  I
Sbjct: 267 HDTLTSCLEPTQI 279


>gi|147858211|emb|CAN79677.1| hypothetical protein VITISV_011751 [Vitis vinifera]
          Length = 454

 Score =  206 bits (524), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 136/344 (39%), Positives = 179/344 (52%), Gaps = 42/344 (12%)

Query: 144 HGPETTQCVSFTRINFPSAA--HVVQVSASENHAAFVLQSGQVFTCGDNSSF----CCGH 197
           H P  T  + F  + + +    HV++V   EN        G V     +  +       +
Sbjct: 138 HHPSHTYTILFLSMRYVTRYRRHVMKVEPFENEQVAAASMGTVKNWAISFEYMEIILPAN 197

Query: 198 RDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRP 257
            +  +P      +      P  QV+   N   F+   G   TCG+ +  + GHGDT+   
Sbjct: 198 DNETKPCMAFSKINFPSLAPVTQVSTSHNHAAFVMQSGEASTCGNYSSFRCGHGDTV--- 254

Query: 258 TP----KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPR 313
            P      +  L+EV    Q+ A  S+   +   G V++ G   +  LG+G+  D     
Sbjct: 255 CPMFRLDFVEALKEV-PYKQVVARFSFAAFLPIKGHVFACGMNIHGQLGYGDTVD----- 308

Query: 314 AIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
                 R+ + +V +  G + V                 GAL HGDEI KT PE LSSLK
Sbjct: 309 ------RRTLKIVELLEGVDPV-----------------GALDHGDEIGKTAPEILSSLK 345

Query: 374 SHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVS 433
           SHLAVQVC  KRKTFVLVDTGS YG G MGFGS GFPDRG SDKV RP ILD+LR H++S
Sbjct: 346 SHLAVQVCVWKRKTFVLVDTGSAYGLGQMGFGSFGFPDRGDSDKVTRPWILDNLRGHYIS 405

Query: 434 QISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF 477
           Q+STGLY T+ V ++G++FG GDNER +LGHDTLRG  E  EIF
Sbjct: 406 QMSTGLYRTITVINKGQVFGLGDNERVRLGHDTLRGSPELAEIF 449


>gi|115488190|ref|NP_001066582.1| Os12g0284000 [Oryza sativa Japonica Group]
 gi|77554669|gb|ABA97465.1| regulator of chromosome condensation, putative, expressed [Oryza
           sativa Japonica Group]
 gi|77554670|gb|ABA97466.1| regulator of chromosome condensation, putative, expressed [Oryza
           sativa Japonica Group]
 gi|108862484|gb|ABA97467.2| regulator of chromosome condensation, putative, expressed [Oryza
           sativa Japonica Group]
 gi|113649089|dbj|BAF29601.1| Os12g0284000 [Oryza sativa Japonica Group]
 gi|215694343|dbj|BAG89336.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|215694576|dbj|BAG89767.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|215704369|dbj|BAG93803.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|222616915|gb|EEE53047.1| hypothetical protein OsJ_35777 [Oryza sativa Japonica Group]
          Length = 534

 Score =  204 bits (518), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 167/502 (33%), Positives = 238/502 (47%), Gaps = 49/502 (9%)

Query: 8   FSIEELPSHLIFEILTSGRLSAVDLAHLELTSKTFGGSHGLYPQKFRSLVDLAASQLCAL 67
           F +   PS ++  +LTS  L   DLAHLE T   F       P    S+ +LAA  +C  
Sbjct: 49  FPLAANPS-IVLHVLTSCNLEPDDLAHLEATCSFFRKPANFPPDFQLSMSELAALDMCQK 107

Query: 68  HSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLIS 127
            +I+  M++  +     RC G+WK VLRF+ + E      ++     Q   G  H++ ++
Sbjct: 108 RAIFKPMTQQEREMFKQRCGGSWKLVLRFIMAGEACCRREKS-----QAIAGPGHSIAVT 162

Query: 128 NS-SVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 179
            S +V++ GS+  G LGHG       P   + +   RI        +Q +A       V 
Sbjct: 163 TSGAVYTFGSNSSGQLGHGSLEEEWRPRIIRSLQGIRI--------IQAAAGAGRTMLVS 214

Query: 180 QSGQVFTCGDNSSFCCGHR-DTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVH 238
            +G+V+  G +S     +    +R +  P+LVE+LK +   Q   G  FT  L+  GHV+
Sbjct: 215 DAGRVYAFGKDSFGEVEYAAQGSRVVTTPQLVESLKDIYIVQAAIGNFFTAVLSREGHVY 274

Query: 239 TCGSNTHGQLGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSYMLAVT---GNGVVYSFG 294
           T       +LGH    +   P  +A PLE +  VVQIAAG  Y+LA+        VYS G
Sbjct: 275 TFSWGNDMKLGHQTEPNDVQPHLLAGPLENI-PVVQIAAGYCYLLALACQPSGMSVYSVG 333

Query: 295 SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGA 354
            G    LGHG + DE  PR I+ F+   I  V V+AG  H   +   G V TWG G  G 
Sbjct: 334 CGLGGKLGHGSRTDEKYPRLIEQFQALNIQPVVVAAGAWHAAVVGKDGRVCTWGWGRYGC 393

Query: 355 LGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGF----P 410
           LGHG+E  +++P+ + SL +  AV V      TFV+ D G VY FG     SLG      
Sbjct: 394 LGHGNEECESVPKVVESLVNVRAVHVATGDYTTFVVSDKGDVYSFGCGESSSLGHNTITE 453

Query: 411 DRGVSDKVLRPRILDSLR--AHHVSQIS--TGLY---HTVVVTDRGRLFGFGDNERAQLG 463
                  VL P ++ SL+     V+QIS    +Y   HT  +TD G+L+ FG  ++ QLG
Sbjct: 454 GNNRHTNVLSPELVTSLKRTNERVAQISLTNSIYWNAHTFALTDSGKLYAFGAGDKGQLG 513

Query: 464 HDTLRGCLEPTEIFIQEMEEDT 485
                     TE+  QE E  T
Sbjct: 514 ----------TELVAQESERGT 525


>gi|297814848|ref|XP_002875307.1| regulator of chromosome condensation family protein [Arabidopsis
           lyrata subsp. lyrata]
 gi|297321145|gb|EFH51566.1| regulator of chromosome condensation family protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 533

 Score =  204 bits (518), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 164/483 (33%), Positives = 232/483 (48%), Gaps = 34/483 (7%)

Query: 8   FSIEELPSHLIFEILTSGRLSAVDLAHLELTSKTFGGSHGLYPQKFRSLVDLAASQLCAL 67
           F +   PS ++  +LT  RL   DLA+LE T   F       P    SL +LAA  +C  
Sbjct: 47  FPLAANPS-IVLHVLTECRLDPRDLANLEATCSFFSQPANFAPDINLSLSELAALDMCNK 105

Query: 68  HSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLI- 126
             I+  M+   + E+  RC G+WK VLRFL + E      ++     Q   G  H++ + 
Sbjct: 106 RVIFKPMNEEERQEMKRRCGGSWKLVLRFLLAGEACCRREKS-----QAVAGPGHSIAVT 160

Query: 127 SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFT 186
           S   V++ G +  G LGHG  T +      +       ++Q +A       +   G+V+ 
Sbjct: 161 SKGEVYTFGYNNSGQLGHG-HTEEQARIQPVRSLQGIRIIQAAAGAARTMLISDDGKVYA 219

Query: 187 CGDNS--SFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNT 244
           CG  S      G + T +P+  P+LV +LK +   Q   G  FT  L+  G V+T     
Sbjct: 220 CGKESFGEAEYGGQGT-QPVTTPQLVTSLKNIFVVQAAIGNYFTAVLSREGKVYTFSWGN 278

Query: 245 HGQLGH----GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT--GNGV-VYSFGSGS 297
            G+LGH     D   RP    + PLE V  VVQIAAG  Y+LA+    NG+ VYS G G 
Sbjct: 279 DGRLGHQTEAADVEPRPL---LGPLENV-PVVQIAAGYCYLLALACQPNGMSVYSVGCGL 334

Query: 298 NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 357
              LGHG + DE  PR I+ F+   +    V+AG  H   +   G V TWG G  G LGH
Sbjct: 335 GGKLGHGSRTDEKYPRVIEQFKILNLQPRVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGH 394

Query: 358 GDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLG----FPDRG 413
           G+E  +++P+ +  L    AV V      TFV+ D G VY FG     SLG    F ++G
Sbjct: 395 GNEECESVPKVVEGLNHVKAVHVATGDYTTFVVSDDGDVYSFGCGESASLGHHPSFDEQG 454

Query: 414 VS-DKVLRPRILDSLRA--HHVSQIS--TGLY---HTVVVTDRGRLFGFGDNERAQLGHD 465
                VL P ++ SL+     V QIS    +Y   HT  +T+ G+L+ FG  ++ QLG +
Sbjct: 455 NRHANVLSPAVVTSLKQANERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDQGQLGAE 514

Query: 466 TLR 468
             R
Sbjct: 515 LDR 517



 Score = 79.0 bits (193), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 47/148 (31%), Positives = 75/148 (50%), Gaps = 1/148 (0%)

Query: 330 AGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFV 389
           AG  H +A+ S G VYT+G    G LGHG   ++   +P+ SL+    +Q  A   +T +
Sbjct: 151 AGPGHSIAVTSKGEVYTFGYNNSGQLGHGHTEEQARIQPVRSLQGIRIIQAAAGAARTML 210

Query: 390 LVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRG 449
           + D G VY  G   FG   +  +G +  V  P+++ SL+   V Q + G Y T V++  G
Sbjct: 211 ISDDGKVYACGKESFGEAEYGGQG-TQPVTTPQLVTSLKNIFVVQAAIGNYFTAVLSREG 269

Query: 450 RLFGFGDNERAQLGHDTLRGCLEPTEIF 477
           +++ F      +LGH T    +EP  + 
Sbjct: 270 KVYTFSWGNDGRLGHQTEAADVEPRPLL 297


>gi|356511051|ref|XP_003524245.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Glycine max]
          Length = 534

 Score =  202 bits (514), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 155/474 (32%), Positives = 232/474 (48%), Gaps = 26/474 (5%)

Query: 8   FSIEELPSHLIFEILTSGRLSAVDLAHLELTSKTFGGSHGLYPQKFRSLVDLAASQLCAL 67
           F + + PS ++  +LT+  L A DLA LE T   F       P    SL +LAA  +C  
Sbjct: 48  FPLSDNPS-IVLHVLTTCNLYAQDLAKLEATCSFFKRPANFDPDFDLSLSELAALDMCQK 106

Query: 68  HSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLI- 126
            +I+  M+   +  L  RC G+WK VLRFL + E      ++     Q+  G  H++ + 
Sbjct: 107 RAIFNPMTTEQRQHLKQRCGGSWKLVLRFLLAGEACYRREKS-----QVIAGPGHSIAVT 161

Query: 127 SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFT 186
           S   V+S GS+  G LGHG  T        I       ++Q +A+      +  SGQV+ 
Sbjct: 162 SKGVVYSFGSNSSGQLGHG-TTEDGWQPRPIRALQGIRIIQATAATGRTMLISDSGQVYA 220

Query: 187 CGDNSSFCCGH--RDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNT 244
            G    FC      + ++ +  P+LVE+LK +   Q   G  FT  L+  G V+T    +
Sbjct: 221 FG-KQYFCENEIGNEGSKMVTTPQLVESLKNIFVVQAAIGNYFTAVLSREGRVYTFSWGS 279

Query: 245 HGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML--AVTGNGV-VYSFGSGSNFCL 301
            G+L H    +   P+ +    E   VVQIAAG  Y+L  A   +G+ VYS G G    L
Sbjct: 280 DGKLCHQTDPNDVEPRPLLGALEHIPVVQIAAGFCYLLCLACQPSGMSVYSVGCGMGGKL 339

Query: 302 GHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEI 361
           GHG + DE  PR I+ F+   +  + ++AG  H   +   G V TWG G  G LGHG+E 
Sbjct: 340 GHGTETDEKYPRLIEQFQLLNLQPMVIAAGSWHAAVVGQDGRVCTWGWGRHGCLGHGNEE 399

Query: 362 DKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDK---- 417
              +P+ +  LK+  AV V A    TFV+ D+G  Y FG+   G+LG        +    
Sbjct: 400 CALVPKVVEELKNVKAVHVAAGDYTTFVVSDSGDAYSFGYGESGTLGHDPENPEQEHMHA 459

Query: 418 -VLRPRILDSLRAHH--VSQIST-----GLYHTVVVTDRGRLFGFGDNERAQLG 463
            VL P+++ S++ ++  V QIS       + HT  +T+ G+L+ FG  ++ QLG
Sbjct: 460 DVLTPKLVTSMKQNYERVIQISLTNSVYWIAHTFALTESGKLYAFGAGDKGQLG 513



 Score = 82.0 bits (201), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 51/160 (31%), Positives = 80/160 (50%), Gaps = 4/160 (2%)

Query: 318 FRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLA 377
           +RR+   V+   AG  H +A+ S G VY++G    G LGHG   D   P P+ +L+    
Sbjct: 143 YRREKSQVI---AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEDGWQPRPIRALQGIRI 199

Query: 378 VQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIST 437
           +Q  A   +T ++ D+G VY FG   F      + G S  V  P++++SL+   V Q + 
Sbjct: 200 IQATAATGRTMLISDSGQVYAFGKQYFCENEIGNEG-SKMVTTPQLVESLKNIFVVQAAI 258

Query: 438 GLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF 477
           G Y T V++  GR++ F      +L H T    +EP  + 
Sbjct: 259 GNYFTAVLSREGRVYTFSWGSDGKLCHQTDPNDVEPRPLL 298



 Score = 75.5 bits (184), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 72/258 (27%), Positives = 101/258 (39%), Gaps = 59/258 (22%)

Query: 273 QIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGD 332
           Q+ AGP + +AVT  GVVYSFGS S+  LGHG   D  QPR I+    +GI +++ +A  
Sbjct: 149 QVIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEDGWQPRPIRAL--QGIRIIQATAAT 206

Query: 333 EHVVALDSSGYVYTWGKGYCGALGHGDEIDK--TLPEPLSSLKSHLAVQVCARKRKTFVL 390
              + +  SG VY +GK Y      G+E  K  T P+ + SLK+   VQ       T VL
Sbjct: 207 GRTMLISDSGQVYAFGKQYFCENEIGNEGSKMVTTPQLVESLKNIFVVQAAIGNYFTAVL 266

Query: 391 VDTGSVY--------------------------------------GFGWM---------- 402
              G VY                                      GF ++          
Sbjct: 267 SREGRVYTFSWGSDGKLCHQTDPNDVEPRPLLGALEHIPVVQIAAGFCYLLCLACQPSGM 326

Query: 403 -----GFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQ--ISTGLYHTVVVTDRGRLFGFG 455
                G G  G    G       PR+++  +  ++    I+ G +H  VV   GR+  +G
Sbjct: 327 SVYSVGCGMGGKLGHGTETDEKYPRLIEQFQLLNLQPMVIAAGSWHAAVVGQDGRVCTWG 386

Query: 456 DNERAQLGHDTLRGCLEP 473
                 LGH      L P
Sbjct: 387 WGRHGCLGHGNEECALVP 404


>gi|42572533|ref|NP_974362.1| regulator of chromosome condensation repeat-containing protein
           [Arabidopsis thaliana]
 gi|9279617|dbj|BAB01075.1| unnamed protein product [Arabidopsis thaliana]
 gi|110740358|dbj|BAF02074.1| hypothetical protein [Arabidopsis thaliana]
 gi|332643596|gb|AEE77117.1| regulator of chromosome condensation repeat-containing protein
           [Arabidopsis thaliana]
          Length = 532

 Score =  201 bits (512), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 163/480 (33%), Positives = 230/480 (47%), Gaps = 34/480 (7%)

Query: 8   FSIEELPSHLIFEILTSGRLSAVDLAHLELTSKTFGGSHGLYPQKFRSLVDLAASQLCAL 67
           F +   PS ++  +LT  RL   DLA+LE T   F       P    SL +LAA  +C  
Sbjct: 46  FPLAANPS-IVLHVLTECRLDPRDLANLEATCSFFSQPANFAPDINLSLSELAALDMCNK 104

Query: 68  HSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLI- 126
             I+  M+   + E+  RC G+WK VLRFL + E      ++     Q   G  H++ + 
Sbjct: 105 RVIFKPMNEEERQEMKRRCGGSWKLVLRFLLAGEACCRREKS-----QAVAGPGHSVAVT 159

Query: 127 SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFT 186
           S   V++ G +  G LGHG  T        +       ++Q +A       +   G+V+ 
Sbjct: 160 SKGEVYTFGYNNSGQLGHG-HTEDEARIQPVRSLQGVRIIQAAAGAARTMLISDDGKVYA 218

Query: 187 CGDNS--SFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNT 244
           CG  S      G + T +P+  P+LV +LK +   Q   G  FT  L+  G V+T     
Sbjct: 219 CGKESFGEAEYGGQGT-KPVTTPQLVTSLKNIFVVQAAIGNYFTAVLSREGKVYTFSWGN 277

Query: 245 HGQLGH----GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT--GNGV-VYSFGSGS 297
            G+LGH     D   RP    + PLE V  VVQIAAG  Y+LA+    NG+ VYS G G 
Sbjct: 278 DGRLGHQTEAADVEPRPL---LGPLENV-PVVQIAAGYCYLLALACQPNGMSVYSVGCGL 333

Query: 298 NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 357
              LGHG + DE  PR I+ F+   +    V+AG  H   +   G V TWG G  G LGH
Sbjct: 334 GGKLGHGSRTDEKYPRVIEQFQILNLQPRVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGH 393

Query: 358 GDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLG----FPDRG 413
           G+E  +++P+ +  L    AV V      TFV+ D G VY FG     SLG    F ++G
Sbjct: 394 GNEECESVPKVVEGLSHVKAVHVATGDYTTFVVSDDGDVYSFGCGESASLGHHPSFDEQG 453

Query: 414 VS-DKVLRPRILDSLRA--HHVSQIS--TGLY---HTVVVTDRGRLFGFGDNERAQLGHD 465
                VL P ++ SL+     + QIS    +Y   HT  +T+ G+LF FG  ++ QLG +
Sbjct: 454 NRHANVLSPTVVTSLKQVNERMVQISLTNSIYWNAHTFALTESGKLFAFGAGDQGQLGTE 513



 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 49/148 (33%), Positives = 75/148 (50%), Gaps = 1/148 (0%)

Query: 330 AGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFV 389
           AG  H VA+ S G VYT+G    G LGHG   D+   +P+ SL+    +Q  A   +T +
Sbjct: 150 AGPGHSVAVTSKGEVYTFGYNNSGQLGHGHTEDEARIQPVRSLQGVRIIQAAAGAARTML 209

Query: 390 LVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRG 449
           + D G VY  G   FG   +  +G +  V  P+++ SL+   V Q + G Y T V++  G
Sbjct: 210 ISDDGKVYACGKESFGEAEYGGQG-TKPVTTPQLVTSLKNIFVVQAAIGNYFTAVLSREG 268

Query: 450 RLFGFGDNERAQLGHDTLRGCLEPTEIF 477
           +++ F      +LGH T    +EP  + 
Sbjct: 269 KVYTFSWGNDGRLGHQTEAADVEPRPLL 296


>gi|218186674|gb|EEC69101.1| hypothetical protein OsI_38005 [Oryza sativa Indica Group]
          Length = 534

 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 165/502 (32%), Positives = 236/502 (47%), Gaps = 52/502 (10%)

Query: 8   FSIEELPSHLIFEILTSGRLSAVDLAHLELTSKTFGGSHGLYPQKFRSLVDLAASQLCAL 67
           F +   PS ++  +LTS  L   DLAHLE T   F       P    S+ +LAA  +C  
Sbjct: 49  FPLAANPS-IVLHVLTSCNLEPDDLAHLEATCSFFRKPANFPPDFQLSMSELAALDMCQK 107

Query: 68  HSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVE-----HSSDIVETSAGNMQITTGRYH 122
            +I+  M++  +     RC G+WK VLRF+ + E       S  +     ++ +TTG   
Sbjct: 108 RAIFKPMTQQEREMFKQRCGGSWKLVLRFIMAGEACCRREKSQAIAGPGHSIAVTTG--- 164

Query: 123 TLLISNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHVVQVSASENHA 175
                  +V++ GS+  G LGHG       P   + +   RI        +Q +A     
Sbjct: 165 ------GAVYTFGSNSSGQLGHGSLEEEWRPRIIRSLQGIRI--------IQAAAGAGRT 210

Query: 176 AFVLQSGQVFTCGDNSSFCCGHR-DTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 234
             V  +G+V+  G +S     +    +R +  P+LVE+LK +   Q   G  FT  L+  
Sbjct: 211 MLVSDAGRVYAFGKDSFGEVEYAAQGSRVVTTPQLVESLKDIYIVQAAIGNFFTAVLSRE 270

Query: 235 GHVHTCGSNTHGQLGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSYMLAVT---GNGVV 290
           GHV+T       +LGH    +   P  +A PLE +  VVQIAAG  Y+LA+        V
Sbjct: 271 GHVYTFSWGNDMKLGHQTEPNDVQPHLLAGPLENI-PVVQIAAGYCYLLALACQPSGMSV 329

Query: 291 YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKG 350
           YS G G    LGHG + DE  PR I+ F+   I  V V+AG  H   +   G V TWG G
Sbjct: 330 YSVGCGLGGKLGHGSRTDEKYPRLIEQFQALNIQPVVVAAGAWHAAVVGKDGRVCTWGWG 389

Query: 351 YCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGF- 409
             G LGHG+E  +++P+ + SL +  A+ V      TFV+ D G VY FG     SLG  
Sbjct: 390 RYGCLGHGNEECESVPKVVESLVNVRAIHVATGDYTTFVVSDKGDVYSFGCGESSSLGHN 449

Query: 410 ---PDRGVSDKVLRPRILDSLR--AHHVSQIS--TGLY---HTVVVTDRGRLFGFGDNER 459
                      VL P ++ SL+     V+QIS    +Y   HT  +TD G+L+ FG  ++
Sbjct: 450 TITEGNNRHTNVLSPELVTSLKRTNERVAQISLTNSIYWNAHTFALTDSGKLYAFGAGDK 509

Query: 460 AQLGHDTL-----RGCLEPTEI 476
            QLG + +     RG  E  EI
Sbjct: 510 GQLGTELVAQQSERGTPERVEI 531


>gi|356525411|ref|XP_003531318.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like isoform
           1 [Glycine max]
          Length = 539

 Score =  199 bits (505), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 163/496 (32%), Positives = 240/496 (48%), Gaps = 37/496 (7%)

Query: 8   FSIEELPSHLIFEILTSGRLSAVDLAHLELTSKTFGGSHGLYPQKFRSLVDLAASQLCAL 67
           F +   PS ++  +LT+  L   DLA LE T   F       P    SL +LAA  +C  
Sbjct: 51  FPLSANPS-IVLHVLTTCNLYPQDLAKLEATCSFFKQPANFAPDFDLSLSELAALDMCQK 109

Query: 68  HSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLI- 126
            +I+  M+   +  L  RC G+WK VLRFL + E      E S    Q+  G  H++ + 
Sbjct: 110 RAIFKPMTTEQRQHLKQRCGGSWKLVLRFLLAGEACCRRREKS----QVIAGPGHSIAVT 165

Query: 127 SNSSVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSASENHAAFVLQSGQVF 185
           S   V+S GS+  G LGHG  TT+ V   R I       ++Q +A       +  SGQ +
Sbjct: 166 SKGVVYSFGSNSSGQLGHG--TTEDVWQPRPIRALQGIRIIQATAMTGRTMLISDSGQAY 223

Query: 186 TCGDNSSFCCGHRDT-----NRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTC 240
             G  S    G  +T     ++ +  P+LVE+LK +   Q   G  FT  L+  G V+T 
Sbjct: 224 VFGKESF---GEVETIVNRGSKIVTTPQLVESLKNIFVVQAAMGNYFTAVLSREGRVYTF 280

Query: 241 GSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML--AVTGNGV-VYSFGSGS 297
                G+L H    +   P+ +    E   VVQIAAG  Y+L  A   +G+ VYS G G 
Sbjct: 281 SWGCVGKLCHQTDQNDVEPRPLLGALEHIPVVQIAAGFCYLLCLACQPSGMSVYSVGCGL 340

Query: 298 NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 357
              LGHG + +E  PR I+ F+   +  + ++AG  H   +   G V TWG G  G LGH
Sbjct: 341 GGKLGHGTKTNEEYPRLIEQFQLLNLQPMAIAAGSWHAAVVGQDGRVCTWGWGSYGCLGH 400

Query: 358 GDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLG-FPD----R 412
           G+E  + +P+ +  L++  AV V      TFV+ D+G VY FG+   GSLG  P+     
Sbjct: 401 GNEECELVPKVVEELRNVKAVHVATGDFTTFVVSDSGDVYSFGYGESGSLGHVPENHEQE 460

Query: 413 GVSDKVLRPRILDSLRA--HHVSQISTGLY-----HTVVVTDRGRLFGFGDNERAQLG-- 463
            + + VL P+++  ++     V QIS   +     HT  +T+ G+L+ FG  ++ QLG  
Sbjct: 461 DMHENVLTPKLVTWMKQINERVVQISLTNFIYWNAHTFALTESGKLYAFGAGDKGQLGVE 520

Query: 464 ---HDTLRGCLEPTEI 476
              H T +G  E  +I
Sbjct: 521 LGAHQTEKGKPERVDI 536


>gi|357463175|ref|XP_003601869.1| RCC1 domain-containing protein [Medicago truncatula]
 gi|355490917|gb|AES72120.1| RCC1 domain-containing protein [Medicago truncatula]
          Length = 535

 Score =  197 bits (502), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 160/476 (33%), Positives = 230/476 (48%), Gaps = 30/476 (6%)

Query: 8   FSIEELPSHLIFEILTSGRLSAVDLAHLELTSKTFGGSHGLYPQKFRSLVDLAASQLCAL 67
           F +   PS ++  +LTS  L   DLA LE T   F       P    SL +LAA  +C  
Sbjct: 49  FPLSASPS-IVLHVLTSCNLDPQDLAKLEATCSFFRQPANFAPDFALSLAELAAFDMCMK 107

Query: 68  HSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLI- 126
            +I+  M+   + +L  RC G+WK VLR+L + E      ++     Q   G  H++ + 
Sbjct: 108 RAIFKPMTTEERQDLKQRCGGSWKLVLRYLLAGEACCRREKS-----QAIAGPGHSIAVT 162

Query: 127 SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFT 186
           S   V+S GS+  G LGHG  T +      I       ++Q +A       +  SGQV+ 
Sbjct: 163 SKGDVYSFGSNSSGQLGHG-TTEEEWRPKPIRTLQGIRIIQAAAGAGRTMLITDSGQVYA 221

Query: 187 CGDNSSFCCGHR-DTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTH 245
            G +S     +    ++ +  PRLVE+LK +   Q   G  FT  L+  G V+T    + 
Sbjct: 222 FGKDSFGEAEYGGQGSKTVIAPRLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGSD 281

Query: 246 GQLGH-GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML--AVTGNGV-VYSFGSGSNFCL 301
           G+LGH  D+ D      +  LE++  VVQIAAG  Y+L  A   +G+ VYS G G    L
Sbjct: 282 GKLGHHTDSNDMEPHPLLGALEDI-PVVQIAAGYCYLLCLACQPSGMSVYSVGCGLGGKL 340

Query: 302 GHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEI 361
           GHG + DE  PR I+ F+   +  + +SAG  H   +   G V TWG G  G LGHG+E 
Sbjct: 341 GHGTRTDEKFPRLIEQFQTLNLQPMVISAGAWHAAVVGRDGRVCTWGWGRYGCLGHGNEE 400

Query: 362 DKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSD----- 416
            +  P+ + +L +  AV V      TFV+ + G VY FG     SLG     V D     
Sbjct: 401 CEAAPKVVDALTNVKAVHVATGDYTTFVVAEDGDVYSFGCGESASLGH--NAVIDAEGNR 458

Query: 417 --KVLRPRILDSLRA--HHVSQIS--TGLY---HTVVVTDRGRLFGFGDNERAQLG 463
              VL P ++ SL+     V QIS    +Y   HT  +T+ G+L+ FG  ++ QLG
Sbjct: 459 HANVLNPELVTSLKQINERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 514



 Score = 88.6 bits (218), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 49/144 (34%), Positives = 79/144 (54%), Gaps = 1/144 (0%)

Query: 330 AGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFV 389
           AG  H +A+ S G VY++G    G LGHG   ++  P+P+ +L+    +Q  A   +T +
Sbjct: 153 AGPGHSIAVTSKGDVYSFGSNSSGQLGHGTTEEEWRPKPIRTLQGIRIIQAAAGAGRTML 212

Query: 390 LVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRG 449
           + D+G VY FG   FG   +  +G S  V+ PR+++SL+   V Q + G + T V++  G
Sbjct: 213 ITDSGQVYAFGKDSFGEAEYGGQG-SKTVIAPRLVESLKNIFVVQAAIGNFFTAVLSREG 271

Query: 450 RLFGFGDNERAQLGHDTLRGCLEP 473
           R++ F      +LGH T    +EP
Sbjct: 272 RVYTFSWGSDGKLGHHTDSNDMEP 295


>gi|356525413|ref|XP_003531319.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like isoform
           2 [Glycine max]
          Length = 535

 Score =  193 bits (490), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 161/496 (32%), Positives = 241/496 (48%), Gaps = 41/496 (8%)

Query: 8   FSIEELPSHLIFEILTSGRLSAVDLAHLELTSKTFGGSHGLYPQKFRSLVDLAASQLCAL 67
           F +   PS ++  +LT+  L   DLA LE +++         P    SL +LAA  +C  
Sbjct: 51  FPLSANPS-IVLHVLTTCNLYPQDLAKLEASAQ----PANFAPDFDLSLSELAALDMCQK 105

Query: 68  HSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLI- 126
            +I+  M+   +  L  RC G+WK VLRFL + E      E S    Q+  G  H++ + 
Sbjct: 106 RAIFKPMTTEQRQHLKQRCGGSWKLVLRFLLAGEACCRRREKS----QVIAGPGHSIAVT 161

Query: 127 SNSSVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSASENHAAFVLQSGQVF 185
           S   V+S GS+  G LGHG  TT+ V   R I       ++Q +A       +  SGQ +
Sbjct: 162 SKGVVYSFGSNSSGQLGHG--TTEDVWQPRPIRALQGIRIIQATAMTGRTMLISDSGQAY 219

Query: 186 TCGDNSSFCCGHRDT-----NRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTC 240
             G  S    G  +T     ++ +  P+LVE+LK +   Q   G  FT  L+  G V+T 
Sbjct: 220 VFGKES---FGEVETIVNRGSKIVTTPQLVESLKNIFVVQAAMGNYFTAVLSREGRVYTF 276

Query: 241 GSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML--AVTGNGV-VYSFGSGS 297
                G+L H    +   P+ +    E   VVQIAAG  Y+L  A   +G+ VYS G G 
Sbjct: 277 SWGCVGKLCHQTDQNDVEPRPLLGALEHIPVVQIAAGFCYLLCLACQPSGMSVYSVGCGL 336

Query: 298 NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 357
              LGHG + +E  PR I+ F+   +  + ++AG  H   +   G V TWG G  G LGH
Sbjct: 337 GGKLGHGTKTNEEYPRLIEQFQLLNLQPMAIAAGSWHAAVVGQDGRVCTWGWGSYGCLGH 396

Query: 358 GDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLG-FPD----R 412
           G+E  + +P+ +  L++  AV V      TFV+ D+G VY FG+   GSLG  P+     
Sbjct: 397 GNEECELVPKVVEELRNVKAVHVATGDFTTFVVSDSGDVYSFGYGESGSLGHVPENHEQE 456

Query: 413 GVSDKVLRPRILDSLRA--HHVSQISTGLY-----HTVVVTDRGRLFGFGDNERAQLG-- 463
            + + VL P+++  ++     V QIS   +     HT  +T+ G+L+ FG  ++ QLG  
Sbjct: 457 DMHENVLTPKLVTWMKQINERVVQISLTNFIYWNAHTFALTESGKLYAFGAGDKGQLGVE 516

Query: 464 ---HDTLRGCLEPTEI 476
              H T +G  E  +I
Sbjct: 517 LGAHQTEKGKPERVDI 532


>gi|356567464|ref|XP_003551939.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Glycine
           max]
          Length = 535

 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 163/493 (33%), Positives = 236/493 (47%), Gaps = 32/493 (6%)

Query: 8   FSIEELPSHLIFEILTSGRLSAVDLAHLELTSKTFGGSHGLYPQKFRSLVDLAASQLCAL 67
           F +   PS ++  +LT+  L   DLA LE T   F       P    SL +LAA  +C  
Sbjct: 48  FPLSANPS-IVLHVLTACNLEPQDLAKLEATCSFFRQPANFAPDLDLSLSELAALDMCQK 106

Query: 68  HSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLI- 126
            +I+  M+   + +L  RC G+WK  LR+L + E      ++     Q   G  H++ + 
Sbjct: 107 RAIFKPMTTEQRQDLKLRCGGSWKLALRYLMAGEACCRREKS-----QAIAGPGHSIAVT 161

Query: 127 SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFT 186
           S   V+S GS+  G LGHG  T +      I       ++Q +A       V  SGQV+ 
Sbjct: 162 SKGVVYSFGSNSSGQLGHG-TTDEEWRPRPIRTLQGIRIIQAAAGAGRTMLVSDSGQVYA 220

Query: 187 CGDNSSFCCGH-RDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTH 245
            G +S     +    ++ +  P++VE+LK +   Q   G  FT  L+  G V+T    + 
Sbjct: 221 FGKDSFGEAEYGVQGSKTVAAPQIVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGSD 280

Query: 246 GQLGH-GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML--AVTGNGV-VYSFGSGSNFCL 301
           G+LGH  D  D      +  LE +  VVQIAAG  Y+L  A   +G+ VYS G G    L
Sbjct: 281 GKLGHHTDQSDVEPHPLLGALENI-PVVQIAAGYCYLLCLACQPSGMSVYSVGCGLGGKL 339

Query: 302 GHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEI 361
           GHG + DE  PR I+ F    +  + V+AG  H   +   G V TWG G  G LGHG+E 
Sbjct: 340 GHGSRTDEKYPRLIEQFGLLNLQPMVVAAGAWHAAVVGRDGRVCTWGWGRYGCLGHGNEE 399

Query: 362 DKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDK---- 417
            +++P+ + +L +  AV V      TFV+ D G VY FG     SLG    G  ++    
Sbjct: 400 CESVPKVVEALSNVKAVHVATGDYTTFVVSDDGDVYSFGCGESASLGHNAAGNDEQGNRH 459

Query: 418 --VLRPRILDSLRA--HHVSQIS--TGLY---HTVVVTDRGRLFGFGDNERAQLG----- 463
             VL P ++ SL+     V QIS    +Y   HT  +T+ G+L+ FG  ++ QLG     
Sbjct: 460 ANVLSPELVTSLKQINERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVA 519

Query: 464 HDTLRGCLEPTEI 476
           + T RG  E  EI
Sbjct: 520 NQTERGNPERVEI 532


>gi|356540207|ref|XP_003538581.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Glycine
           max]
          Length = 530

 Score =  192 bits (488), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 164/493 (33%), Positives = 236/493 (47%), Gaps = 37/493 (7%)

Query: 8   FSIEELPSHLIFEILTSGRLSAVDLAHLELTSKTFGGSHGLYPQKFRSLVDLAASQLCAL 67
           F +   PS ++  +LT+  L   DLA LE T   F       P    SL +LAA  +C  
Sbjct: 48  FPLSANPS-IVLHVLTACNLDPQDLAKLEATCSFFRQPANFAPDSDLSLSELAALDMCQK 106

Query: 68  HSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLIS 127
            +I+  M+   + +L  RC G+WK VLR+L + E      ++     Q   G  H++ ++
Sbjct: 107 RAIFKPMTTEQRQDLKLRCGGSWKLVLRYLMAGEACCRREKS-----QAIAGPGHSIAVT 161

Query: 128 NSS-VFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSASENHAAFVLQSGQVF 185
           +   V+S GS+  G LGHG  TT+     R I       ++Q +A       V  SGQV+
Sbjct: 162 SKGIVYSFGSNSSGQLGHG--TTEEEWRPRPIRTLQGIRIIQAAAGAGRTMLVSDSGQVY 219

Query: 186 TCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTH 245
             G+      G    ++ +  P++VE+LK +   Q   G  FT  L+  G V+T    + 
Sbjct: 220 AFGEAEYGVQG----SKTVAAPQIVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGSD 275

Query: 246 GQLGH-GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML--AVTGNGV-VYSFGSGSNFCL 301
            +LGH  D  D      +  LE +  VVQIAAG  Y+L  A   +G+ VYS G G    L
Sbjct: 276 EKLGHHTDQSDVEPHPLLGALENI-PVVQIAAGYCYLLCLACQPSGMSVYSVGCGLGGKL 334

Query: 302 GHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEI 361
           GHG + DE  PR I+ F    +  + V+AG  H   +   G V TWG G  G LGHG+E 
Sbjct: 335 GHGSRTDEEYPRLIEQFGLLNLQPMVVAAGAWHAAVVGRDGRVCTWGWGRYGCLGHGNEE 394

Query: 362 DKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSD----- 416
            +++P+ + +L +  AV V      TFV+ D G VY FG     SLG    G  +     
Sbjct: 395 CESVPKVVEALSNVKAVHVATGDYTTFVVSDDGDVYSFGCGQSASLGHNAAGNDEQGNRH 454

Query: 417 -KVLRPRILDSLRA--HHVSQIST-----GLYHTVVVTDRGRLFGFGDNERAQLG----- 463
            KVL P ++ SL+     V QIS         HT  +T+ G+L+ FG  ++ QLG     
Sbjct: 455 AKVLDPELVTSLKQINERVVQISLTNCNYWNAHTFALTESGKLYAFGAGDKGQLGIELVA 514

Query: 464 HDTLRGCLEPTEI 476
           + T RG  E  EI
Sbjct: 515 NQTERGNPERVEI 527


>gi|449435009|ref|XP_004135288.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2-like [Cucumis
           sativus]
 gi|449494867|ref|XP_004159669.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2-like [Cucumis
           sativus]
          Length = 534

 Score =  191 bits (486), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 160/491 (32%), Positives = 233/491 (47%), Gaps = 29/491 (5%)

Query: 8   FSIEELPSHLIFEILTSGRLSAVDLAHLELTSKTFGGSHGLYPQKFRSLVDLAASQLCAL 67
           F +   PS ++  +LT+  L   DLA LE T   F       P    S+ +LAA  +C  
Sbjct: 48  FPLAANPS-IVLHVLTACNLDPQDLAKLEATCSFFRQPANFAPDYELSISELAALDMCRK 106

Query: 68  HSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLIS 127
            +I+  M+      +  RC G+WK VLRFL + E           +M I    +   + S
Sbjct: 107 RAIFKPMTPEQHEAMKQRCGGSWKLVLRFLVAGESCC----RREKSMAIAGPGHSIAVTS 162

Query: 128 NSSVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSASENHAAFVLQSGQVFT 186
             +V+S GS+  G LGHG  TT+  S  R I       ++Q +A       +  +G V+ 
Sbjct: 163 KGAVYSFGSNSSGQLGHG--TTEEQSPPRLIRSLQGIRIIQAAAGGGRTMLISDAGHVYA 220

Query: 187 CGDNSSFCCGH-RDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTH 245
            G +S     +     + +  P+LVE+LK +   Q   G  FT  L+  G V+T    T 
Sbjct: 221 FGKDSFGEAEYGAQGAQVVTTPKLVESLKDIFVVQAAIGNFFTAVLSREGTVYTFSWGTD 280

Query: 246 GQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT---GNGVVYSFGSGSNFCLG 302
            +LGH    +   P+ +    E   VVQIAAG  Y+LA+        VYS G G    LG
Sbjct: 281 SRLGHHTEPNDLEPRPLKGALENIPVVQIAAGYCYLLALACHPSGMSVYSVGCGLGGKLG 340

Query: 303 HGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEID 362
           HG + DE  PR I+ F+   +  V V+AG  H   +   G V TWG G  G LGHG+E  
Sbjct: 341 HGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGRDGRVCTWGWGRYGCLGHGNEDC 400

Query: 363 KTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLG----FPDRGVSDK- 417
           ++ P+ + +L +  AV V      TFV+ D G VY FG     SLG     P+   + + 
Sbjct: 401 ESSPKVVEALINVKAVHVATGDYTTFVVSDDGDVYSFGCGESASLGHNVVLPEEEGNRQP 460

Query: 418 -VLRPRILDSLR--AHHVSQIS--TGLY---HTVVVTDRGRLFGFGDNERAQLG----HD 465
            VL+P ++ SL+  +  V QIS    +Y   HT  +T+ G+L+ FG  ++ QLG    + 
Sbjct: 461 HVLKPELVRSLKQISERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGVELANQ 520

Query: 466 TLRGCLEPTEI 476
           T RG  E  +I
Sbjct: 521 TERGNPELVDI 531


>gi|326526993|dbj|BAK00885.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 534

 Score =  191 bits (485), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 159/499 (31%), Positives = 236/499 (47%), Gaps = 46/499 (9%)

Query: 8   FSIEELPSHLIFEILTSGRLSAVDLAHLELTSKTFGGSHGLYPQKFRSLVDLAASQLCAL 67
           F +   PS ++  +LTS  L   DLAHLE T K F       P     + +LAA  +C  
Sbjct: 49  FPLAANPS-IVLHVLTSCNLYPEDLAHLEATCKFFRKPANFPPDFLLPMSELAALDMCQK 107

Query: 68  HSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLIS 127
            +I+  MS   +     RC G+WK VLRF+ + E      ++     Q   G  H++ +S
Sbjct: 108 RAIFKPMSTQEREMFKQRCGGSWKLVLRFIMAGEACCRREKS-----QAIAGPGHSIAVS 162

Query: 128 NS-SVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 179
            S + ++ GS+  G LGH        P   + +   RI        +Q +A       V 
Sbjct: 163 TSGAAYTFGSNNSGQLGHASLEEEWRPRPVRSLQGIRI--------IQAAAGAGRTMLVS 214

Query: 180 QSGQVFTCGDNS--SFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHV 237
            +G+V+  G +S      G++ + R +  P++VE+LK +   Q   G  FT  L+  G V
Sbjct: 215 DAGRVYAFGKDSFGEVEFGNQGS-RAVATPQMVESLKDIYIVQAAIGNFFTAVLSREGCV 273

Query: 238 HTCGSNTHGQLGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSYMLAVT---GNGVVYSF 293
           +T    +  +LGH    +   P  +  PLE +  VVQIAAG  Y+LA+        VYS 
Sbjct: 274 YTFSWGSDMKLGHQTEPNDVQPHLLTGPLENI-PVVQIAAGYCYLLALACQPSGMSVYSV 332

Query: 294 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 353
           G G    LGHG + DE  PR I+ F+   I  + V+AG  H   +   G V TWG G  G
Sbjct: 333 GCGLGGKLGHGTRTDEKYPRLIEQFQTLNIQPIVVAAGAWHAAVVGKDGRVCTWGWGRYG 392

Query: 354 ALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLG----F 409
            LGHG+E  +++P+ + +L S  AV V      TF++   G VY FG     SLG     
Sbjct: 393 CLGHGNEECESVPKVVEALSSVKAVYVATGDYTTFIVSCKGDVYSFGCGESSSLGHNTTI 452

Query: 410 PDRGVSDKVLRPRILDSLRAHH--VSQIS--TGLY---HTVVVTDRGRLFGFGDNERAQL 462
                   VL P ++ SL++ +  V Q+S    +Y   HT  +T+ G+L+ FG  ++ QL
Sbjct: 453 EGNNRHSNVLSPELVTSLQSKNEKVVQVSLTNSVYWNAHTFALTESGKLYAFGAGDKGQL 512

Query: 463 G-----HDTLRGCLEPTEI 476
           G      ++ RG  E  EI
Sbjct: 513 GSELVSQESERGTPERVEI 531


>gi|255547958|ref|XP_002515036.1| RCC1 and BTB domain-containing protein, putative [Ricinus communis]
 gi|223546087|gb|EEF47590.1| RCC1 and BTB domain-containing protein, putative [Ricinus communis]
          Length = 537

 Score =  190 bits (483), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 160/495 (32%), Positives = 235/495 (47%), Gaps = 35/495 (7%)

Query: 8   FSIEELPSHLIFEILTSGRLSAVDLAHLELTSKTFGGSHGLYPQKFRSLVDLAASQLCAL 67
           F +   PS ++  +LT+  L   DLA LE ++     ++   P    S+ +LAA  +C  
Sbjct: 49  FPLAASPS-IVLHVLTTCNLDPQDLAKLEASALLLQPAN-FAPDYELSISELAALDMCQK 106

Query: 68  HSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLI- 126
            +I+  M+   + +L  RC G+WK VLRFL + E           N Q   G  H++ + 
Sbjct: 107 RAIFKPMTSEERRDLKQRCGGSWKLVLRFLLAGEAC-----CRRENSQAIAGPGHSIAVT 161

Query: 127 SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFT 186
           S   V+S GS+  G LGHG  T +     +I       ++Q +A       +  +GQV+ 
Sbjct: 162 SKGVVYSFGSNSSGQLGHG-NTEEEWRPRQIRSLQGIRIIQAAAGPGRTMLISDAGQVYA 220

Query: 187 CGDNS--SFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNT 244
            G +S      G + T + +  P+LVE+LK +   Q   G  FT  L+  G V+T    +
Sbjct: 221 FGKDSFGEAEYGVQGT-KLVTTPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGS 279

Query: 245 HGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT---GNGVVYSFGSGSNFCL 301
            G+LGH        P  +    E   VVQIAAG  Y+LA+        VYS G G    L
Sbjct: 280 DGKLGHQTEPTDVEPHPLLGALENIPVVQIAAGYCYLLALACQPSGMSVYSVGCGLGGKL 339

Query: 302 GHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEI 361
           GHG + DE  PR I+ F+   +  + V+AG  H   +   G V TWG G  G LGHG+E 
Sbjct: 340 GHGSRTDEKYPRLIEQFQLLNLQPMVVAAGAWHAAVVGRDGRVCTWGWGRYGCLGHGNEE 399

Query: 362 DKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLG--------FPDRG 413
            +++P+ + +L +  AV V      TFV+ + G VY FG     SLG           +G
Sbjct: 400 CESVPKVVDALSNIKAVHVATGDYTTFVVSEEGDVYSFGCGESASLGHNAAAAANADGQG 459

Query: 414 VSDKVLRPRILDSLRA--HHVSQIS--TGLY---HTVVVTDRGRLFGFGDNERAQLG--- 463
               VL P ++ SL+     V QIS    +Y   HT  +TD G+L+ FG  ++ QLG   
Sbjct: 460 RHANVLSPELVTSLKEVNERVVQISLTNSIYWNAHTFALTDSGKLYAFGAGDKGQLGTEL 519

Query: 464 --HDTLRGCLEPTEI 476
             + T RG  E  +I
Sbjct: 520 VNNQTERGNPERVDI 534


>gi|357160277|ref|XP_003578713.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like
           [Brachypodium distachyon]
          Length = 534

 Score =  189 bits (480), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 159/498 (31%), Positives = 234/498 (46%), Gaps = 44/498 (8%)

Query: 8   FSIEELPSHLIFEILTSGRLSAVDLAHLELTSKTFGGSHGLYPQKFRSLVDLAASQLCAL 67
           F +   PS ++  +LTS  +   DLAHLE T K F       P     + +LAA  +C  
Sbjct: 49  FPLAANPS-IVLHVLTSCNVEPEDLAHLEATCKFFRKPANFPPDFQLPMSELAALDMCHK 107

Query: 68  HSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLIS 127
            +I+  M+   +     RC G+WK VLRF+ + E      ++     Q   G  H++ ++
Sbjct: 108 RAIFKHMTTQEREMFKQRCGGSWKLVLRFIMAGEACCRREKS-----QAIAGPGHSIAVT 162

Query: 128 NS-SVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 179
            S +V++ GS+  G LGH        P   + +   RI        +Q +A       V 
Sbjct: 163 TSGAVYTFGSNNSGQLGHDGLEEEWRPRPIRSLQGIRI--------IQAAAGAGRTMLVS 214

Query: 180 QSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVH 238
            +G+V+  G +S     +    +R +  P++VE+LK +   Q   G  FT  L+  G V+
Sbjct: 215 DAGRVYAFGKDSFGEVEYGVQGSRVVTTPQMVESLKDIYIVQAAIGNFFTAVLSREGCVY 274

Query: 239 TCGSNTHGQLGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSYMLAVT---GNGVVYSFG 294
           T    +  +LGH    +   P  +  PLE +  VVQIAAG  Y+LA+        VYS G
Sbjct: 275 TFSWGSDMKLGHQTEPNDVQPHLLTGPLENI-PVVQIAAGYCYLLALACQPSGMSVYSVG 333

Query: 295 SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGA 354
            G    LGHG + DE  PR I+ F+   I  V V+AG  H   +   G V TWG G  G 
Sbjct: 334 CGLGGKLGHGSRTDEKYPRLIEQFQTLNIQPVVVAAGAWHAAVVSKDGRVCTWGWGRYGC 393

Query: 355 LGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLG----FP 410
           LGHG+E  +++P+ + +L S  AV V      TFV+ D G VY FG     SLG      
Sbjct: 394 LGHGNEECESVPKVVEALGSVKAVHVATGDYTTFVVSDKGDVYSFGCGESSSLGHNTIIE 453

Query: 411 DRGVSDKVLRPRILDSLR--AHHVSQIS--TGLY---HTVVVTDRGRLFGFGDNERAQLG 463
                  VL P ++ SL+     V Q+S    +Y   HT  +T+ G+L+ FG  ++ QLG
Sbjct: 454 GNNRHSNVLSPELVTSLKRTNERVVQVSLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 513

Query: 464 HDTL-----RGCLEPTEI 476
            + +     RG  E  EI
Sbjct: 514 TELVAQQNERGAPERVEI 531


>gi|224135099|ref|XP_002321983.1| predicted protein [Populus trichocarpa]
 gi|222868979|gb|EEF06110.1| predicted protein [Populus trichocarpa]
          Length = 538

 Score =  189 bits (480), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 160/496 (32%), Positives = 231/496 (46%), Gaps = 35/496 (7%)

Query: 8   FSIEELPSHLIFEILTSGRLSAVDLAHLELTSKT----FGGSHGLYPQKFRSLVDLAASQ 63
           F +   PS ++  +LT+  L   DLA LE  S      F       P    S+ +LAA  
Sbjct: 48  FPLAANPS-IVLHVLTTCNLDPQDLAKLEAKSIATCSFFRQPASFAPDYELSMSELAALD 106

Query: 64  LCALHSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNMQITTGRYHT 123
           +C   +I+  M+   + +L  RC G+WK VLRFL + E       +     Q   G  H+
Sbjct: 107 MCQKRAIFKPMTPEERQDLKQRCGGSWKLVLRFLLAGEACCRRERS-----QAIAGPGHS 161

Query: 124 LLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSG 182
           + + SN   +S GS+  G LGHG  T +     +I       ++Q +A       +  +G
Sbjct: 162 IAVTSNGVAYSFGSNSSGQLGHG-TTEEEWRPRQIRSLQGIRIIQAAAGPGRTMLISDAG 220

Query: 183 QVFTCGDNS--SFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTC 240
           +V+  G +S      G + T + +  P+LVE+LK +   Q   G  FT  L+  G V+T 
Sbjct: 221 EVYAFGKDSFGEAEYGVQGT-KTVTTPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTF 279

Query: 241 GSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT---GNGVVYSFGSGS 297
                G+LGH    +   P  +    E   VVQIAAG  Y+LA+        VYS G G 
Sbjct: 280 SWGNDGKLGHQTEPNDVVPHPLLGALENIPVVQIAAGYCYLLALACQPSGMSVYSVGCGL 339

Query: 298 NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 357
              LGHG + DE  PR I+ F+   +  + V+AG  H   +   G V TWG G  G LGH
Sbjct: 340 GGKLGHGSRTDEKYPRLIEQFQLLNLQPMVVAAGAWHAAVVGRDGRVCTWGWGRYGCLGH 399

Query: 358 GDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSD- 416
           G+E  +++P+ + +L    AV V      TFV+ D G VY FG     SLG    G    
Sbjct: 400 GNEECESVPKVVDALSKVKAVHVATGDYTTFVVSDDGDVYSFGCGESASLGHNGDGDGQG 459

Query: 417 ----KVLRPRILDSLR--AHHVSQIS--TGLY---HTVVVTDRGRLFGFGDNERAQLG-- 463
                VL P ++ SL+     V QIS    +Y   HT  +T+ G+LF FG  ++ QLG  
Sbjct: 460 NRHTNVLSPELVTSLKEVKERVVQISLTNSVYWNAHTFALTESGKLFAFGAGDKGQLGME 519

Query: 464 ---HDTLRGCLEPTEI 476
              + T RG  E  ++
Sbjct: 520 LVNNQTERGNPEQVDV 535


>gi|225424560|ref|XP_002285332.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2 isoform 1
           [Vitis vinifera]
 gi|296081404|emb|CBI16837.3| unnamed protein product [Vitis vinifera]
          Length = 534

 Score =  189 bits (480), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 162/493 (32%), Positives = 238/493 (48%), Gaps = 33/493 (6%)

Query: 8   FSIEELPSHLIFEILTSGRLSAVDLAHLELTSKTFGGSHGLYPQKFRSLVDLAASQLCAL 67
           F +   PS ++  +LT+  L   DLA LE T   F       P    S+ +LAA  +C  
Sbjct: 48  FPLAANPS-IVLHVLTACNLEPQDLAKLEATCSFFRQPAHFAPDFELSISELAALDMCLK 106

Query: 68  HSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLIS 127
            +I+  M    +  L  RC G+WK VLRFL + E      ++     Q   G  H++ ++
Sbjct: 107 RAIFRPMMLEEREVLKQRCGGSWKLVLRFLLAGEACCRREKS-----QAIAGPGHSIAVT 161

Query: 128 -NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFT 186
              +V+S GS+  G LGHG  T +     +I       ++Q +A       +  +GQV+ 
Sbjct: 162 VKGAVYSFGSNSSGQLGHG-TTDEEWRPRQIRSLEGIRIIQAAAGAGRTMLISDAGQVYA 220

Query: 187 CGDNS--SFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNT 244
            G +S      G + T + +  P+LVE+LK +   Q   G  FT  L+  G V+T     
Sbjct: 221 FGKDSFGEAEYGVQGT-KLVTTPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGN 279

Query: 245 HGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT--GNGV-VYSFGSGSNFCL 301
             +LGH    +   P  +    E   VVQIAAG  Y+LA+    NG+ VYS G G    L
Sbjct: 280 DAKLGHQTEANDLEPHPLLGALENIPVVQIAAGYCYLLALACQPNGMSVYSVGCGLGGKL 339

Query: 302 GHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEI 361
           GHG + DE  PR I+ FR   +  + V+AG  H   +   G V TWG G  G LGHG+E 
Sbjct: 340 GHGTRTDEKHPRLIEQFRILNLQPMVVAAGAWHAAVVGRDGRVCTWGWGRYGCLGHGNEE 399

Query: 362 DKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGF---PDRGVSDK- 417
            +++P+ + +L +  AV V      TFV+ D G VY FG     SLG    PD G  ++ 
Sbjct: 400 CESVPKVVEALINVKAVHVATGDYTTFVVSDDGDVYSFGCGESSSLGHNNGPD-GQGNRH 458

Query: 418 --VLRPRILDSLR--AHHVSQIS--TGLY---HTVVVTDRGRLFGFGDNERAQLG----- 463
             +L P ++ SL+     + QIS    +Y   HT  +T+ G+L+ FG  ++ QLG     
Sbjct: 459 ANILSPELVTSLKQIKERMVQISLTNSIYWNAHTFALTETGKLYAFGAGDKGQLGVELVA 518

Query: 464 HDTLRGCLEPTEI 476
           + T RG  E  +I
Sbjct: 519 NQTERGNPERVDI 531


>gi|302811669|ref|XP_002987523.1| hypothetical protein SELMODRAFT_126315 [Selaginella moellendorffii]
 gi|300144677|gb|EFJ11359.1| hypothetical protein SELMODRAFT_126315 [Selaginella moellendorffii]
          Length = 508

 Score =  184 bits (468), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 159/488 (32%), Positives = 230/488 (47%), Gaps = 45/488 (9%)

Query: 8   FSIEELPSHLIFEILTSGRLSAVDLAHLELTSKTFGGSHGLYPQKFRSLVDLAASQLCAL 67
           F +   PS ++  +LT   L   DLA LE T   F  +    P    SL +LAA  +C  
Sbjct: 21  FPLATNPS-IVLHVLTECCLDPQDLARLEATCSFFRHAANFTPDVTLSLSELAALDMCKR 79

Query: 68  HSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLIS 127
            +I+  M+   +  L   C G+WK VLRFL++ E     +      +Q   G  H+++++
Sbjct: 80  RAIFRPMTSEERESLKESCGGSWKLVLRFLKAGE-----LCYRREKIQAIAGPGHSIVVT 134

Query: 128 NS-SVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 179
            + +V++ GSS  G LGHG       P   + +   RI        +Q +A       + 
Sbjct: 135 KTGAVYTFGSSSSGQLGHGSLDEEWRPRLLRSLQGVRI--------IQATAGVGRTMLIS 186

Query: 180 QSGQVFTCGDNSSFCCGHRDTNRP----IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRG 235
            +G+V+  G +S    G  +   P    I  P++VE+L G+   Q   G  FT  L+  G
Sbjct: 187 DTGRVYAFGKDSF---GDPEYGGPGSKNINTPQIVESLNGIFVVQAAIGNFFTAVLSREG 243

Query: 236 HVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG---VVYS 292
            V+T       +LGH    +   P+ +    E   VVQIAAG  Y+LA+T       VYS
Sbjct: 244 RVYTFSWGADAKLGHQTEPEDQKPQLLRGALENKPVVQIAAGYCYLLALTCQSTGMAVYS 303

Query: 293 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 352
            G G    LGHG + DE  P+ I+ F+   +  + V+AG  H   +   G V TWG G  
Sbjct: 304 VGCGLGGKLGHGTRSDERWPKMIEHFQHLRLQPIAVAAGAWHAAVVSEDGRVCTWGWGRY 363

Query: 353 GALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGF--- 409
           G LGHG+E  + LP+ + SL+   AV V      TFV+ D G V+  G     SLG    
Sbjct: 364 GCLGHGNEDCELLPKVVESLQGVKAVHVATGDYTTFVVTDAGEVFSCGCGESSSLGHLSG 423

Query: 410 PDRGVSDK---VLRPRILDSL--RAHHVSQIS-----TGLYHTVVVTDRGRLFGFGDNER 459
              G +++   VLRP ++ SL  R   V QIS     T   HT  + D GRLF FG  ++
Sbjct: 424 ATEGQANRHANVLRPELVSSLKQRNEKVLQISLTNSVTWNAHTFALCDSGRLFAFGAGDK 483

Query: 460 AQLGHDTL 467
            QLG + L
Sbjct: 484 GQLGTELL 491


>gi|302812094|ref|XP_002987735.1| hypothetical protein SELMODRAFT_426505 [Selaginella moellendorffii]
 gi|300144627|gb|EFJ11310.1| hypothetical protein SELMODRAFT_426505 [Selaginella moellendorffii]
          Length = 539

 Score =  184 bits (468), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 159/488 (32%), Positives = 230/488 (47%), Gaps = 45/488 (9%)

Query: 8   FSIEELPSHLIFEILTSGRLSAVDLAHLELTSKTFGGSHGLYPQKFRSLVDLAASQLCAL 67
           F +   PS ++  +LT   L   DLA LE T   F  +    P    SL +LAA  +C  
Sbjct: 52  FPLATNPS-IVLHVLTECCLDPQDLARLEATCSFFRHAANFTPDVTLSLSELAALDMCKR 110

Query: 68  HSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLIS 127
            +I+  M+   +  L   C G+WK VLRFL++ E     +      +Q   G  H+++++
Sbjct: 111 RAIFRPMTSEERESLKESCGGSWKLVLRFLKAGE-----LCYRREKIQAIAGPGHSIVVT 165

Query: 128 NS-SVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 179
            + +V++ GSS  G LGHG       P   + +   RI        +Q +A       + 
Sbjct: 166 KTGAVYTFGSSSSGQLGHGSLDEEWRPRLLRSLQGVRI--------IQATAGVGRTMLIS 217

Query: 180 QSGQVFTCGDNSSFCCGHRDTNRP----IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRG 235
            +G+V+  G +S    G  +   P    I  P++VE+L G+   Q   G  FT  L+  G
Sbjct: 218 DTGRVYAFGKDS---FGDPEYGGPGSKNINTPQIVESLNGIFVVQAAIGNFFTAVLSREG 274

Query: 236 HVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG---VVYS 292
            V+T       +LGH    +   P+ +    E   VVQIAAG  Y+LA+T       VYS
Sbjct: 275 RVYTFSWGADAKLGHQTEPEDQKPQLLRGALENKPVVQIAAGYCYLLALTCQSTGMAVYS 334

Query: 293 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 352
            G G    LGHG + DE  P+ I+ F+   +  + V+AG  H   +   G V TWG G  
Sbjct: 335 VGCGLGGKLGHGTRSDERWPKMIEHFQHLRLQPIAVAAGAWHAAVVSEDGRVCTWGWGRY 394

Query: 353 GALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGF--- 409
           G LGHG+E  + LP+ + SL+   AV V      TFV+ D G V+  G     SLG    
Sbjct: 395 GCLGHGNEDCELLPKVVESLQGVKAVHVATGDYTTFVVTDAGEVFSCGCGESSSLGHLSG 454

Query: 410 PDRGVSDK---VLRPRILDSL--RAHHVSQIS-----TGLYHTVVVTDRGRLFGFGDNER 459
              G +++   VLRP ++ SL  R   V QIS     T   HT  + D GRLF FG  ++
Sbjct: 455 ATEGQANRHANVLRPELVSSLKQRNEKVLQISLTNSVTWNAHTFALCDSGRLFAFGAGDK 514

Query: 460 AQLGHDTL 467
            QLG + L
Sbjct: 515 GQLGTELL 522


>gi|77554672|gb|ABA97468.1| regulator of chromosome condensation, putative, expressed [Oryza
           sativa Japonica Group]
 gi|77554673|gb|ABA97469.1| regulator of chromosome condensation, putative, expressed [Oryza
           sativa Japonica Group]
 gi|108862485|gb|ABG21962.1| regulator of chromosome condensation, putative, expressed [Oryza
           sativa Japonica Group]
 gi|108862486|gb|ABG21963.1| regulator of chromosome condensation, putative, expressed [Oryza
           sativa Japonica Group]
          Length = 439

 Score =  184 bits (466), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 150/454 (33%), Positives = 217/454 (47%), Gaps = 48/454 (10%)

Query: 56  LVDLAASQLCALHSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNMQ 115
           + +LAA  +C   +I+  M++  +     RC G+WK VLRF+ + E      ++     Q
Sbjct: 1   MSELAALDMCQKRAIFKPMTQQEREMFKQRCGGSWKLVLRFIMAGEACCRREKS-----Q 55

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHVVQ 167
              G  H++ ++ S +V++ GS+  G LGHG       P   + +   RI        +Q
Sbjct: 56  AIAGPGHSIAVTTSGAVYTFGSNSSGQLGHGSLEEEWRPRIIRSLQGIRI--------IQ 107

Query: 168 VSASENHAAFVLQSGQVFTCGDNSSFCCGHR-DTNRPIFRPRLVEALKGVPCKQVTAGLN 226
            +A       V  +G+V+  G +S     +    +R +  P+LVE+LK +   Q   G  
Sbjct: 108 AAAGAGRTMLVSDAGRVYAFGKDSFGEVEYAAQGSRVVTTPQLVESLKDIYIVQAAIGNF 167

Query: 227 FTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSYMLAVT 285
           FT  L+  GHV+T       +LGH    +   P  +A PLE +  VVQIAAG  Y+LA+ 
Sbjct: 168 FTAVLSREGHVYTFSWGNDMKLGHQTEPNDVQPHLLAGPLENI-PVVQIAAGYCYLLALA 226

Query: 286 ---GNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
                  VYS G G    LGHG + DE  PR I+ F+   I  V V+AG  H   +   G
Sbjct: 227 CQPSGMSVYSVGCGLGGKLGHGSRTDEKYPRLIEQFQALNIQPVVVAAGAWHAAVVGKDG 286

Query: 343 YVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWM 402
            V TWG G  G LGHG+E  +++P+ + SL +  AV V      TFV+ D G VY FG  
Sbjct: 287 RVCTWGWGRYGCLGHGNEECESVPKVVESLVNVRAVHVATGDYTTFVVSDKGDVYSFGCG 346

Query: 403 GFGSLGF----PDRGVSDKVLRPRILDSLR--AHHVSQIS--TGLY---HTVVVTDRGRL 451
              SLG             VL P ++ SL+     V+QIS    +Y   HT  +TD G+L
Sbjct: 347 ESSSLGHNTITEGNNRHTNVLSPELVTSLKRTNERVAQISLTNSIYWNAHTFALTDSGKL 406

Query: 452 FGFGDNERAQLGHDTLRGCLEPTEIFIQEMEEDT 485
           + FG  ++ QLG          TE+  QE E  T
Sbjct: 407 YAFGAGDKGQLG----------TELVAQESERGT 430


>gi|147784312|emb|CAN77314.1| hypothetical protein VITISV_008041 [Vitis vinifera]
          Length = 541

 Score =  182 bits (461), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 156/477 (32%), Positives = 231/477 (48%), Gaps = 30/477 (6%)

Query: 8   FSIEELPSHLIFEILTSGRLSAVDLAHLEL--TSKTFGGSHGLYPQKFRSLVDLAASQLC 65
           F +   PS ++  +LT+  L   DLA LE   T   F       P    S+ +LAA  +C
Sbjct: 48  FPLAANPS-IVLHVLTACNLEPQDLAKLEASATCSFFRQPAHFAPDFELSISELAALDMC 106

Query: 66  ALHSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLL 125
              +I+  M    +  L  RC G+WK VLRFL + E      ++     Q   G  H++ 
Sbjct: 107 LKRAIFRPMXLEEREVLKQRCGGSWKLVLRFLLAGEACCRREKS-----QAIAGPGHSIA 161

Query: 126 IS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQV 184
           ++   +V+S GS+  G LGHG  T +     +I       ++Q +A       +  +GQV
Sbjct: 162 VTVKGAVYSFGSNSSGQLGHG-TTDEEWRPRQIRSLEGIRIIQAAAGAGRTMLISDAGQV 220

Query: 185 FTCGDNS--SFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 242
           +  G +S      G + T + +  P+LVE+LK +   Q   G  FT  L+  G V+T   
Sbjct: 221 YAFGKDSFGEAEYGVQGT-KLVTTPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSW 279

Query: 243 NTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT--GNGV-VYSFGSGSNF 299
               +LGH    +   P  +    E   VVQIAAG  Y+LA+    NG+ VYS G G   
Sbjct: 280 GNDAKLGHQTEANDLEPHPLLGALENIPVVQIAAGYCYLLALACQPNGMSVYSVGCGLGG 339

Query: 300 CLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGD 359
            LGHG + DE  PR I+ F+   +  + V+AG  H   +   G V TWG G  G LGHG+
Sbjct: 340 KLGHGTRTDEKHPRLIEQFQILNLQPMVVAAGAWHAAVVGRDGRVCTWGWGRYGCLGHGN 399

Query: 360 EIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGF---PDRGVSD 416
           E  +++P+ + +L +  AV V      TFV+ D G VY FG     SLG    PD G  +
Sbjct: 400 EECESVPKVVEALINVKAVHVATGDYTTFVVSDDGDVYSFGCGESSSLGHNNGPD-GQGN 458

Query: 417 K---VLRPRILDSLR--AHHVSQIS--TGLY---HTVVVTDRGRLFGFGDNERAQLG 463
           +   +L P ++ SL+     + QIS    +Y   HT  +T+ G+L+ FG  ++ QLG
Sbjct: 459 RHANILSPELVTSLKQIKERMVQISLTNSIYWNAHTFALTETGKLYAFGAGDKGQLG 515



 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 91/307 (29%), Positives = 152/307 (49%), Gaps = 13/307 (4%)

Query: 167 QVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN 226
           Q  A   H+  V   G V++ G NSS   GH  T+   +RPR + +L+G+   Q  AG  
Sbjct: 151 QAIAGPGHSIAVTVKGAVYSFGSNSSGQLGHGTTDEE-WRPRQIRSLEGIRIIQAAAGAG 209

Query: 227 FTGFLTIRGHVHTCGSNTHGQLGHG--DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 284
            T  ++  G V+  G ++ G+  +G   T    TP+ +  L+ +  VVQ A G  +   +
Sbjct: 210 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTTPQLVESLKNI-FVVQAAIGNFFTAVL 268

Query: 285 TGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL---DSS 341
           +  G VY+F  G++  LGH  + ++L+P  +     + I VV+++AG  +++AL    + 
Sbjct: 269 SREGRVYTFSWGNDAKLGHQTEANDLEPHPL-LGALENIPVVQIAAGYCYLLALACQPNG 327

Query: 342 GYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK--SHLAVQVCARKRKTFVLVDTGSVYGF 399
             VY+ G G  G LGHG   D+  P  +   +  +   + V A      V+   G V  +
Sbjct: 328 MSVYSVGCGLGGKLGHGTRTDEKHPRLIEQFQILNLQPMVVAAGAWHAAVVGRDGRVCTW 387

Query: 400 GWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNER 459
           GW  +G LG    G  +    P+++++L       ++TG Y T VV+D G ++ FG  E 
Sbjct: 388 GWGRYGCLG---HGNEECESVPKVVEALINVKAVHVATGDYTTFVVSDDGDVYSFGCGES 444

Query: 460 AQLGHDT 466
           + LGH+ 
Sbjct: 445 SSLGHNN 451



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 48/144 (33%), Positives = 75/144 (52%), Gaps = 1/144 (0%)

Query: 330 AGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFV 389
           AG  H +A+   G VY++G    G LGHG   ++  P  + SL+    +Q  A   +T +
Sbjct: 154 AGPGHSIAVTVKGAVYSFGSNSSGQLGHGTTDEEWRPRQIRSLEGIRIIQAAAGAGRTML 213

Query: 390 LVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRG 449
           + D G VY FG   FG   +  +G +  V  P++++SL+   V Q + G + T V++  G
Sbjct: 214 ISDAGQVYAFGKDSFGEAEYGVQG-TKLVTTPQLVESLKNIFVVQAAIGNFFTAVLSREG 272

Query: 450 RLFGFGDNERAQLGHDTLRGCLEP 473
           R++ F     A+LGH T    LEP
Sbjct: 273 RVYTFSWGNDAKLGHQTEANDLEP 296


>gi|242065672|ref|XP_002454125.1| hypothetical protein SORBIDRAFT_04g024990 [Sorghum bicolor]
 gi|241933956|gb|EES07101.1| hypothetical protein SORBIDRAFT_04g024990 [Sorghum bicolor]
          Length = 535

 Score =  181 bits (460), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 156/486 (32%), Positives = 226/486 (46%), Gaps = 41/486 (8%)

Query: 8   FSIEELPSHLIFEILTSGRLSAVDLAHLELTSKTFGGSHGLYPQKFRSLVDLAASQLCAL 67
           F +   PS ++  +L++  L   DLA+LE T   F       P    SL +LAA  +C  
Sbjct: 52  FPLAVSPS-IVLHVLSACDLDPKDLANLEATCTFFSKPANFAPNFALSLPELAAFDMCQK 110

Query: 68  HSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLIS 127
            +++  M +  Q  L  RC G+WK VL+++        +V    G+ ++  G  H+++IS
Sbjct: 111 RTMFKLMKQEDQECLKQRCGGSWKHVLKYI--------LVREKNGS-RVIAGPGHSIVIS 161

Query: 128 -NSSVFSCGSSLCGVLGHGPETTQ---CVSFTRINFPSAAHVVQVSASENHAAFVLQSGQ 183
            N  V+S G++  G LG G    +   C+    I       + Q +        V  +G 
Sbjct: 162 SNGDVYSFGANCSGQLGLGDSEDRFRPCI----IRSLQGIRITQAAVGSRWTMLVSDTGS 217

Query: 184 VFTCG-DNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 242
           V+  G DN        D +  I  P++VE+LKGV   Q   G  F+  L+  G V+T   
Sbjct: 218 VYAFGKDNFRGAEVVDDAHIQITTPKIVESLKGVFVVQAAIGGYFSAVLSREGRVYTFSW 277

Query: 243 NTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY--MLAVTGNGV-VYSFGSGSNF 299
               +LGH        P+ ++ LE+V  V  I+AG  Y  MLA   NG+ VYS G G   
Sbjct: 278 GKEERLGHSSDPSDVEPRLLSGLEDV-PVAYISAGNCYLLMLAYQPNGMSVYSVGCGLGG 336

Query: 300 CLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGD 359
            LGHG + ++  P+ I+ F+      V ++AG  H  AL + G V TWG G+ G LGHGD
Sbjct: 337 KLGHGCKTNKGMPKLIEQFQSLSFKPVSIAAGTWHAAALGADGRVCTWGWGHTGCLGHGD 396

Query: 360 EIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDK-- 417
           E  K +P  +  L+   AV +   +  TFV+ + G VY FG     SL F +   +++  
Sbjct: 397 EEYKAVPTLVEGLRDVKAVHLSTGEYTTFVVAENGDVYSFG--SGESLVFQEDDEAEEGP 454

Query: 418 -VLRPRILDSLRA--HHVSQIS-----------TGLYHTVVVTDRGRLFGFGDNERAQLG 463
               P I+ SL+A    V QIS            G  HT  V D G L  FG   R QLG
Sbjct: 455 DFSTPSIVSSLKALNKKVVQISPTNASYWLNSEMGHPHTFAVMDSGDLCAFGGGIRGQLG 514

Query: 464 HDTLRG 469
              L G
Sbjct: 515 VKLLEG 520



 Score = 77.8 bits (190), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 63/225 (28%), Positives = 106/225 (47%), Gaps = 12/225 (5%)

Query: 259 PKSIAPLEEVGSVVQIAA--GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQ 316
           PK +A LE   +     A   P++ L++            + F L   E  + L+ R   
Sbjct: 72  PKDLANLEATCTFFSKPANFAPNFALSLPELAAFDMCQKRTMFKLMKQEDQECLKQRCGG 131

Query: 317 TFRRKGIHVV-------RVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPL 369
           +++    +++       RV AG  H + + S+G VY++G    G LG GD  D+  P  +
Sbjct: 132 SWKHVLKYILVREKNGSRVIAGPGHSIVISSNGDVYSFGANCSGQLGLGDSEDRFRPCII 191

Query: 370 SSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGF-GSLGFPDRGVSDKVLRPRILDSLR 428
            SL+     Q     R T ++ DTGSVY FG   F G+    D  +  ++  P+I++SL+
Sbjct: 192 RSLQGIRITQAAVGSRWTMLVSDTGSVYAFGKDNFRGAEVVDDAHI--QITTPKIVESLK 249

Query: 429 AHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEP 473
              V Q + G Y + V++  GR++ F   +  +LGH +    +EP
Sbjct: 250 GVFVVQAAIGGYFSAVLSREGRVYTFSWGKEERLGHSSDPSDVEP 294


>gi|18404804|ref|NP_566789.1| regulator of chromosome condensation repeat-containing protein
           [Arabidopsis thaliana]
 gi|14334716|gb|AAK59536.1| unknown protein [Arabidopsis thaliana]
 gi|16323434|gb|AAL15211.1| unknown protein [Arabidopsis thaliana]
 gi|332643597|gb|AEE77118.1| regulator of chromosome condensation repeat-containing protein
           [Arabidopsis thaliana]
          Length = 432

 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 141/421 (33%), Positives = 203/421 (48%), Gaps = 27/421 (6%)

Query: 64  LCALHSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNMQITTGRYHT 123
           +C    I+  M+   + E+  RC G+WK VLRFL + E      ++     Q   G  H+
Sbjct: 1   MCNKRVIFKPMNEEERQEMKRRCGGSWKLVLRFLLAGEACCRREKS-----QAVAGPGHS 55

Query: 124 LLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSG 182
           + + S   V++ G +  G LGHG  T        +       ++Q +A       +   G
Sbjct: 56  VAVTSKGEVYTFGYNNSGQLGHG-HTEDEARIQPVRSLQGVRIIQAAAGAARTMLISDDG 114

Query: 183 QVFTCGDNS--SFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTC 240
           +V+ CG  S      G + T +P+  P+LV +LK +   Q   G  FT  L+  G V+T 
Sbjct: 115 KVYACGKESFGEAEYGGQGT-KPVTTPQLVTSLKNIFVVQAAIGNYFTAVLSREGKVYTF 173

Query: 241 GSNTHGQLGHGDTLDRPTPKSI-APLEEVGSVVQIAAGPSYMLAVT--GNGV-VYSFGSG 296
                G+LGH        P+ +  PLE V  VVQIAAG  Y+LA+    NG+ VYS G G
Sbjct: 174 SWGNDGRLGHQTEAADVEPRPLLGPLENV-PVVQIAAGYCYLLALACQPNGMSVYSVGCG 232

Query: 297 SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 356
               LGHG + DE  PR I+ F+   +    V+AG  H   +   G V TWG G  G LG
Sbjct: 233 LGGKLGHGSRTDEKYPRVIEQFQILNLQPRVVAAGAWHAAVVGQDGRVCTWGWGRYGCLG 292

Query: 357 HGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLG----FPDR 412
           HG+E  +++P+ +  L    AV V      TFV+ D G VY FG     SLG    F ++
Sbjct: 293 HGNEECESVPKVVEGLSHVKAVHVATGDYTTFVVSDDGDVYSFGCGESASLGHHPSFDEQ 352

Query: 413 GVS-DKVLRPRILDSLRA--HHVSQIS--TGLY---HTVVVTDRGRLFGFGDNERAQLGH 464
           G     VL P ++ SL+     + QIS    +Y   HT  +T+ G+LF FG  ++ QLG 
Sbjct: 353 GNRHANVLSPTVVTSLKQVNERMVQISLTNSIYWNAHTFALTESGKLFAFGAGDQGQLGT 412

Query: 465 D 465
           +
Sbjct: 413 E 413



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 49/148 (33%), Positives = 75/148 (50%), Gaps = 1/148 (0%)

Query: 330 AGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFV 389
           AG  H VA+ S G VYT+G    G LGHG   D+   +P+ SL+    +Q  A   +T +
Sbjct: 50  AGPGHSVAVTSKGEVYTFGYNNSGQLGHGHTEDEARIQPVRSLQGVRIIQAAAGAARTML 109

Query: 390 LVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRG 449
           + D G VY  G   FG   +  +G +  V  P+++ SL+   V Q + G Y T V++  G
Sbjct: 110 ISDDGKVYACGKESFGEAEYGGQG-TKPVTTPQLVTSLKNIFVVQAAIGNYFTAVLSREG 168

Query: 450 RLFGFGDNERAQLGHDTLRGCLEPTEIF 477
           +++ F      +LGH T    +EP  + 
Sbjct: 169 KVYTFSWGNDGRLGHQTEAADVEPRPLL 196


>gi|359473138|ref|XP_003631252.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2 isoform 2
           [Vitis vinifera]
          Length = 526

 Score =  176 bits (445), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 148/446 (33%), Positives = 219/446 (49%), Gaps = 32/446 (7%)

Query: 55  SLVDLAASQLCALHSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNM 114
           S+ +LAA  +C   +I+  M    +  L  RC G+WK VLRFL + E      ++     
Sbjct: 86  SISELAALDMCLKRAIFRPMMLEEREVLKQRCGGSWKLVLRFLLAGEACCRREKS----- 140

Query: 115 QITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
           Q   G  H++ ++   +V+S GS+  G LGHG  T +     +I       ++Q +A   
Sbjct: 141 QAIAGPGHSIAVTVKGAVYSFGSNSSGQLGHG-TTDEEWRPRQIRSLEGIRIIQAAAGAG 199

Query: 174 HAAFVLQSGQVFTCGDNS--SFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
               +  +GQV+  G +S      G + T + +  P+LVE+LK +   Q   G  FT  L
Sbjct: 200 RTMLISDAGQVYAFGKDSFGEAEYGVQGT-KLVTTPQLVESLKNIFVVQAAIGNFFTAVL 258

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT--GNGV 289
           +  G V+T       +LGH    +   P  +    E   VVQIAAG  Y+LA+    NG+
Sbjct: 259 SREGRVYTFSWGNDAKLGHQTEANDLEPHPLLGALENIPVVQIAAGYCYLLALACQPNGM 318

Query: 290 -VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 348
            VYS G G    LGHG + DE  PR I+ FR   +  + V+AG  H   +   G V TWG
Sbjct: 319 SVYSVGCGLGGKLGHGTRTDEKHPRLIEQFRILNLQPMVVAAGAWHAAVVGRDGRVCTWG 378

Query: 349 KGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLG 408
            G  G LGHG+E  +++P+ + +L +  AV V      TFV+ D G VY FG     SLG
Sbjct: 379 WGRYGCLGHGNEECESVPKVVEALINVKAVHVATGDYTTFVVSDDGDVYSFGCGESSSLG 438

Query: 409 F---PDRGVSDK---VLRPRILDSLR--AHHVSQIS--TGLY---HTVVVTDRGRLFGFG 455
               PD G  ++   +L P ++ SL+     + QIS    +Y   HT  +T+ G+L+ FG
Sbjct: 439 HNNGPD-GQGNRHANILSPELVTSLKQIKERMVQISLTNSIYWNAHTFALTETGKLYAFG 497

Query: 456 DNERAQLG-----HDTLRGCLEPTEI 476
             ++ QLG     + T RG  E  +I
Sbjct: 498 AGDKGQLGVELVANQTERGNPERVDI 523


>gi|115447089|ref|NP_001047324.1| Os02g0597000 [Oryza sativa Japonica Group]
 gi|47847831|dbj|BAD21626.1| rjs-like protein [Oryza sativa Japonica Group]
 gi|113536855|dbj|BAF09238.1| Os02g0597000 [Oryza sativa Japonica Group]
 gi|215717087|dbj|BAG95450.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 537

 Score =  174 bits (440), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 144/477 (30%), Positives = 218/477 (45%), Gaps = 33/477 (6%)

Query: 8   FSIEELPSHLIFEILTSGRLSAVDLAHLELTSKTFGGSHGLYPQKFRSLVDLAASQLCAL 67
           F +   PS ++  +L++  L   DLA LE T   F       P    SL ++AA  +C  
Sbjct: 52  FPLAVSPS-IVLHVLSTCELDPKDLAALEATCTFFSKPANFEPNFALSLPEVAAFDMCHK 110

Query: 68  HSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLIS 127
             +   M++  + +L  RC G+WK V +++ + E +           +I  G  H+++++
Sbjct: 111 RPMVKLMAQQEREQLKQRCGGSWKLVFKYIVARERNYS---------RIVAGPGHSIVVT 161

Query: 128 NS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFT 186
                +S G++  G LG G +T        I    +  + Q +        V  +G V+ 
Sbjct: 162 TKGDAYSFGANCWGQLGLG-DTEDRFKPCLIRSLQSIKITQAAVGSRQTMLVSDTGSVYA 220

Query: 187 CGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHG 246
            G  S       D    I  P++VE+LKGV   Q   G  F+ FL+  G V+T       
Sbjct: 221 FGKGSFVWEELSDAADHITTPKIVESLKGVFVVQAAIGGYFSAFLSREGQVYTISWGRTE 280

Query: 247 QLGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSY--MLAVTGNGV-VYSFGSGSNFCLG 302
           +LGH        P+ ++ PLE V  V QI+AG  Y  MLA    G+ VYS G G    LG
Sbjct: 281 RLGHSSDPSDVEPRLLSGPLEGV-LVAQISAGNCYLLMLAYQPTGMSVYSVGCGLGGKLG 339

Query: 303 HGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEID 362
           HG ++++  P+ I+ F     + V V+AG  H  AL   G V TWG G+ G LGHGDE  
Sbjct: 340 HGCKNNKGTPKLIEHFLTLSFNPVSVAAGTWHAAALGDDGRVCTWGWGHTGCLGHGDEEY 399

Query: 363 KTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLR-- 420
           + LP  +  L +  AV V   +  TFV+ D G  Y FG     ++GF +   +       
Sbjct: 400 RVLPTVVQGLSNVKAVHVSTGEYTTFVVSDNGDTYSFGSAESLNIGFQEDEEAADDADFS 459

Query: 421 -PRILDSLRA--HHVSQIST-----------GLYHTVVVTDRGRLFGFGDNERAQLG 463
            P +++SL+       QIST           G  HT  + + G+L+ FG   + QLG
Sbjct: 460 TPSLVESLKVLNDKAVQISTTNSSYWLNSEMGYPHTFALMESGKLYAFGGGIKGQLG 516



 Score = 80.1 bits (196), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 76/253 (30%), Positives = 116/253 (45%), Gaps = 15/253 (5%)

Query: 220 QVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPS 279
           ++ AG   +  +T +G  ++ G+N  GQLG GDT DR  P  I  L+ +  + Q A G  
Sbjct: 149 RIVAGPGHSIVVTTKGDAYSFGANCWGQLGLGDTEDRFKPCLIRSLQSI-KITQAAVGSR 207

Query: 280 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQ-PRAIQTFRRKGIHVVRVSAGDEHVVAL 338
             + V+  G VY+FG GS       +  D +  P+ +++   KG+ VV+ + G      L
Sbjct: 208 QTMLVSDTGSVYAFGKGSFVWEELSDAADHITTPKIVESL--KGVFVVQAAIGGYFSAFL 265

Query: 339 DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLS-SLKSHLAVQVCARKRKTFVLV--DTG- 394
              G VYT   G    LGH  +     P  LS  L+  L  Q+ A      +L    TG 
Sbjct: 266 SREGQVYTISWGRTERLGHSSDPSDVEPRLLSGPLEGVLVAQISAGNCYLLMLAYQPTGM 325

Query: 395 SVYGFGWMGFGSLGFPDRGVSDKVLRPRILD---SLRAHHVSQISTGLYHTVVVTDRGRL 451
           SVY  G    G LG    G  +    P++++   +L  + VS ++ G +H   + D GR+
Sbjct: 326 SVYSVGCGLGGKLG---HGCKNNKGTPKLIEHFLTLSFNPVS-VAAGTWHAAALGDDGRV 381

Query: 452 FGFGDNERAQLGH 464
             +G      LGH
Sbjct: 382 CTWGWGHTGCLGH 394



 Score = 72.8 bits (177), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 45/147 (30%), Positives = 73/147 (49%), Gaps = 2/147 (1%)

Query: 327 RVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRK 386
           R+ AG  H + + + G  Y++G    G LG GD  D+  P  + SL+S    Q     R+
Sbjct: 149 RIVAGPGHSIVVTTKGDAYSFGANCWGQLGLGDTEDRFKPCLIRSLQSIKITQAAVGSRQ 208

Query: 387 TFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT 446
           T ++ DTGSVY FG   F      D   +D +  P+I++SL+   V Q + G Y +  ++
Sbjct: 209 TMLVSDTGSVYAFGKGSFVWEELSD--AADHITTPKIVESLKGVFVVQAAIGGYFSAFLS 266

Query: 447 DRGRLFGFGDNERAQLGHDTLRGCLEP 473
             G+++        +LGH +    +EP
Sbjct: 267 REGQVYTISWGRTERLGHSSDPSDVEP 293


>gi|222623170|gb|EEE57302.1| hypothetical protein OsJ_07379 [Oryza sativa Japonica Group]
          Length = 609

 Score =  174 bits (440), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 144/477 (30%), Positives = 218/477 (45%), Gaps = 33/477 (6%)

Query: 8   FSIEELPSHLIFEILTSGRLSAVDLAHLELTSKTFGGSHGLYPQKFRSLVDLAASQLCAL 67
           F +   PS ++  +L++  L   DLA LE T   F       P    SL ++AA  +C  
Sbjct: 124 FPLAVSPS-IVLHVLSTCELDPKDLAALEATCTFFSKPANFEPNFALSLPEVAAFDMCHK 182

Query: 68  HSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLIS 127
             +   M++  + +L  RC G+WK V +++ + E +           +I  G  H+++++
Sbjct: 183 RPMVKLMAQQEREQLKQRCGGSWKLVFKYIVARERNYS---------RIVAGPGHSIVVT 233

Query: 128 NS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFT 186
                +S G++  G LG G +T        I    +  + Q +        V  +G V+ 
Sbjct: 234 TKGDAYSFGANCWGQLGLG-DTEDRFKPCLIRSLQSIKITQAAVGSRQTMLVSDTGSVYA 292

Query: 187 CGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHG 246
            G  S       D    I  P++VE+LKGV   Q   G  F+ FL+  G V+T       
Sbjct: 293 FGKGSFVWEELSDAADHITTPKIVESLKGVFVVQAAIGGYFSAFLSREGQVYTISWGRTE 352

Query: 247 QLGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSY--MLAVTGNGV-VYSFGSGSNFCLG 302
           +LGH        P+ ++ PLE V  V QI+AG  Y  MLA    G+ VYS G G    LG
Sbjct: 353 RLGHSSDPSDVEPRLLSGPLEGV-LVAQISAGNCYLLMLAYQPTGMSVYSVGCGLGGKLG 411

Query: 303 HGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEID 362
           HG ++++  P+ I+ F     + V V+AG  H  AL   G V TWG G+ G LGHGDE  
Sbjct: 412 HGCKNNKGTPKLIEHFLTLSFNPVSVAAGTWHAAALGDDGRVCTWGWGHTGCLGHGDEEY 471

Query: 363 KTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLR-- 420
           + LP  +  L +  AV V   +  TFV+ D G  Y FG     ++GF +   +       
Sbjct: 472 RVLPTVVQGLSNVKAVHVSTGEYTTFVVSDNGDTYSFGSAESLNIGFQEDEEAADDADFS 531

Query: 421 -PRILDSLRA--HHVSQIST-----------GLYHTVVVTDRGRLFGFGDNERAQLG 463
            P +++SL+       QIST           G  HT  + + G+L+ FG   + QLG
Sbjct: 532 TPSLVESLKVLNDKAVQISTTNSSYWLNSEMGYPHTFALMESGKLYAFGGGIKGQLG 588



 Score = 79.7 bits (195), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 76/253 (30%), Positives = 116/253 (45%), Gaps = 15/253 (5%)

Query: 220 QVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPS 279
           ++ AG   +  +T +G  ++ G+N  GQLG GDT DR  P  I  L+ +  + Q A G  
Sbjct: 221 RIVAGPGHSIVVTTKGDAYSFGANCWGQLGLGDTEDRFKPCLIRSLQSI-KITQAAVGSR 279

Query: 280 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQ-PRAIQTFRRKGIHVVRVSAGDEHVVAL 338
             + V+  G VY+FG GS       +  D +  P+ +++   KG+ VV+ + G      L
Sbjct: 280 QTMLVSDTGSVYAFGKGSFVWEELSDAADHITTPKIVESL--KGVFVVQAAIGGYFSAFL 337

Query: 339 DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLS-SLKSHLAVQVCARKRKTFVLV--DTG- 394
              G VYT   G    LGH  +     P  LS  L+  L  Q+ A      +L    TG 
Sbjct: 338 SREGQVYTISWGRTERLGHSSDPSDVEPRLLSGPLEGVLVAQISAGNCYLLMLAYQPTGM 397

Query: 395 SVYGFGWMGFGSLGFPDRGVSDKVLRPRILD---SLRAHHVSQISTGLYHTVVVTDRGRL 451
           SVY  G    G LG    G  +    P++++   +L  + VS ++ G +H   + D GR+
Sbjct: 398 SVYSVGCGLGGKLG---HGCKNNKGTPKLIEHFLTLSFNPVS-VAAGTWHAAALGDDGRV 453

Query: 452 FGFGDNERAQLGH 464
             +G      LGH
Sbjct: 454 CTWGWGHTGCLGH 466



 Score = 72.4 bits (176), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 45/147 (30%), Positives = 73/147 (49%), Gaps = 2/147 (1%)

Query: 327 RVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRK 386
           R+ AG  H + + + G  Y++G    G LG GD  D+  P  + SL+S    Q     R+
Sbjct: 221 RIVAGPGHSIVVTTKGDAYSFGANCWGQLGLGDTEDRFKPCLIRSLQSIKITQAAVGSRQ 280

Query: 387 TFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT 446
           T ++ DTGSVY FG   F      D   +D +  P+I++SL+   V Q + G Y +  ++
Sbjct: 281 TMLVSDTGSVYAFGKGSFVWEELSD--AADHITTPKIVESLKGVFVVQAAIGGYFSAFLS 338

Query: 447 DRGRLFGFGDNERAQLGHDTLRGCLEP 473
             G+++        +LGH +    +EP
Sbjct: 339 REGQVYTISWGRTERLGHSSDPSDVEP 365


>gi|226501958|ref|NP_001145799.1| uncharacterized protein LOC100279306 [Zea mays]
 gi|194702102|gb|ACF85135.1| unknown [Zea mays]
 gi|194704788|gb|ACF86478.1| unknown [Zea mays]
 gi|195621478|gb|ACG32569.1| HECT domain and RCC1-like domain-containing protein 2 [Zea mays]
 gi|219884475|gb|ACL52612.1| unknown [Zea mays]
 gi|223949899|gb|ACN29033.1| unknown [Zea mays]
 gi|224030775|gb|ACN34463.1| unknown [Zea mays]
 gi|413922916|gb|AFW62848.1| putative regulator of chromosome condensation (RCC1) family protein
           isoform 1 [Zea mays]
 gi|413922917|gb|AFW62849.1| putative regulator of chromosome condensation (RCC1) family protein
           isoform 2 [Zea mays]
 gi|413922918|gb|AFW62850.1| putative regulator of chromosome condensation (RCC1) family protein
           isoform 3 [Zea mays]
          Length = 535

 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 149/477 (31%), Positives = 212/477 (44%), Gaps = 35/477 (7%)

Query: 8   FSIEELPSHLIFEILTSGRLSAVDLAHLELTSKTFGGSHGLYPQKFRSLVDLAASQLCAL 67
           F +   PS ++  +L+S  L   DLA+LE T   FG      P    SL +LAA  +C  
Sbjct: 52  FPLAVSPS-IVLHVLSSCDLGPKDLANLEATCVFFGKPASFAPDFALSLPELAAFDMCQK 110

Query: 68  HSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLIS 127
            +++  M +  Q  L  RC G+WK VL ++        +V    G+  I    +  ++ S
Sbjct: 111 RTMFKQMKQEDQECLKQRCGGSWKHVLGYI--------LVREKNGSRVIAGPGHSIIITS 162

Query: 128 NSSVFSCGSSLCGVLGHGPETTQ---CVSFTRINFPSAAHVVQVSASENHAAFVLQSGQV 184
           N  V+S G++  G LG G    +   CV    I       + Q +        V  +G V
Sbjct: 163 NGDVYSFGANCSGQLGLGDSEDRFKPCV----IRSLQGIRITQAAVGSRCTMLVSDTGSV 218

Query: 185 FTCGDNSSFCCGHRD-TNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 243
           ++ G          D  +  I  PR+ E+LKGV   Q   G  F+  L+  G V+T    
Sbjct: 219 YSFGKEDFRVAELVDGAHFQITTPRIEESLKGVFVVQAAIGGYFSAVLSREGRVYTFSWG 278

Query: 244 THGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY--MLAVTGNGV-VYSFGSGSNFC 300
              +LGH        P+ +  LE+V  V  I+AG  Y  MLA   NG+ VYS G G    
Sbjct: 279 KAERLGHSSDPSDVEPRLLPGLEDV-PVAYISAGNCYLLMLAYQPNGMSVYSVGCGLGGK 337

Query: 301 LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 360
           LGHG + +   P+ ++ F+      V ++AG  H VAL + G V TWG G+ G LGHGDE
Sbjct: 338 LGHGCKTNNGMPKLVEQFQSMSFKPVSIAAGTWHAVALGADGRVCTWGWGHTGCLGHGDE 397

Query: 361 IDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSD-KVL 419
             + +P  +  L+   AV V   +  TFV+ + G VY FG     +    D    +    
Sbjct: 398 ECRAVPTVVEGLRDVKAVHVSTGEYTTFVVAENGDVYSFGSGESLAFQLDDEAEEEPDSS 457

Query: 420 RPRILDSLR--AHHVSQIS-----------TGLYHTVVVTDRGRLFGFGDNERAQLG 463
            P I+ SL+     V QIS            G  HT  V D G +  FG   R QLG
Sbjct: 458 TPSIVSSLKDLNKKVVQISHTNASYWMNSEMGHPHTFAVMDSGDVCAFGGGVRGQLG 514



 Score = 77.4 bits (189), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 51/147 (34%), Positives = 75/147 (51%), Gaps = 1/147 (0%)

Query: 327 RVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRK 386
           RV AG  H + + S+G VY++G    G LG GD  D+  P  + SL+     Q     R 
Sbjct: 149 RVIAGPGHSIIITSNGDVYSFGANCSGQLGLGDSEDRFKPCVIRSLQGIRITQAAVGSRC 208

Query: 387 TFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT 446
           T ++ DTGSVY FG   F      D G   ++  PRI +SL+   V Q + G Y + V++
Sbjct: 209 TMLVSDTGSVYSFGKEDFRVAELVD-GAHFQITTPRIEESLKGVFVVQAAIGGYFSAVLS 267

Query: 447 DRGRLFGFGDNERAQLGHDTLRGCLEP 473
             GR++ F   +  +LGH +    +EP
Sbjct: 268 REGRVYTFSWGKAERLGHSSDPSDVEP 294



 Score = 72.0 bits (175), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 71/253 (28%), Positives = 107/253 (42%), Gaps = 15/253 (5%)

Query: 220 QVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPS 279
           +V AG   +  +T  G V++ G+N  GQLG GD+ DR  P  I  L+ +  + Q A G  
Sbjct: 149 RVIAGPGHSIIITSNGDVYSFGANCSGQLGLGDSEDRFKPCVIRSLQGI-RITQAAVGSR 207

Query: 280 YMLAVTGNGVVYSFGSGSNFCLGH---GEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVV 336
             + V+  G VYSFG   +F +     G       PR  ++   KG+ VV+ + G     
Sbjct: 208 CTMLVSDTGSVYSFGK-EDFRVAELVDGAHFQITTPRIEESL--KGVFVVQAAIGGYFSA 264

Query: 337 ALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV---DT 393
            L   G VYT+  G    LGH  +     P  L  L+      + A      +L    + 
Sbjct: 265 VLSREGRVYTFSWGKAERLGHSSDPSDVEPRLLPGLEDVPVAYISAGNCYLLMLAYQPNG 324

Query: 394 GSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRL 451
            SVY  G    G LG    G       P++++  ++     +S   G +H V +   GR+
Sbjct: 325 MSVYSVGCGLGGKLG---HGCKTNNGMPKLVEQFQSMSFKPVSIAAGTWHAVALGADGRV 381

Query: 452 FGFGDNERAQLGH 464
             +G      LGH
Sbjct: 382 CTWGWGHTGCLGH 394


>gi|357463177|ref|XP_003601870.1| RCC1 domain-containing protein [Medicago truncatula]
 gi|355490918|gb|AES72121.1| RCC1 domain-containing protein [Medicago truncatula]
          Length = 432

 Score =  172 bits (437), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 140/420 (33%), Positives = 205/420 (48%), Gaps = 29/420 (6%)

Query: 64  LCALHSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNMQITTGRYHT 123
           +C   +I+  M+   + +L  RC G+WK VLR+L + E      ++     Q   G  H+
Sbjct: 1   MCMKRAIFKPMTTEERQDLKQRCGGSWKLVLRYLLAGEACCRREKS-----QAIAGPGHS 55

Query: 124 LLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSG 182
           + + S   V+S GS+  G LGHG  T +      I       ++Q +A       +  SG
Sbjct: 56  IAVTSKGDVYSFGSNSSGQLGHGT-TEEEWRPKPIRTLQGIRIIQAAAGAGRTMLITDSG 114

Query: 183 QVFTCGDNSSFCCGHR-DTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCG 241
           QV+  G +S     +    ++ +  PRLVE+LK +   Q   G  FT  L+  G V+T  
Sbjct: 115 QVYAFGKDSFGEAEYGGQGSKTVIAPRLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFS 174

Query: 242 SNTHGQLGH-GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML--AVTGNGV-VYSFGSGS 297
             + G+LGH  D+ D      +  LE++  VVQIAAG  Y+L  A   +G+ VYS G G 
Sbjct: 175 WGSDGKLGHHTDSNDMEPHPLLGALEDI-PVVQIAAGYCYLLCLACQPSGMSVYSVGCGL 233

Query: 298 NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 357
              LGHG + DE  PR I+ F+   +  + +SAG  H   +   G V TWG G  G LGH
Sbjct: 234 GGKLGHGTRTDEKFPRLIEQFQTLNLQPMVISAGAWHAAVVGRDGRVCTWGWGRYGCLGH 293

Query: 358 GDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSD- 416
           G+E  +  P+ + +L +  AV V      TFV+ + G VY FG     SLG     V D 
Sbjct: 294 GNEECEAAPKVVDALTNVKAVHVATGDYTTFVVAEDGDVYSFGCGESASLGH--NAVIDA 351

Query: 417 ------KVLRPRILDSLRA--HHVSQIS--TGLY---HTVVVTDRGRLFGFGDNERAQLG 463
                  VL P ++ SL+     V QIS    +Y   HT  +T+ G+L+ FG  ++ QLG
Sbjct: 352 EGNRHANVLNPELVTSLKQINERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 411



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 91/309 (29%), Positives = 148/309 (47%), Gaps = 15/309 (4%)

Query: 167 QVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN 226
           Q  A   H+  V   G V++ G NSS   GH  T    +RP+ +  L+G+   Q  AG  
Sbjct: 47  QAIAGPGHSIAVTSKGDVYSFGSNSSGQLGHGTTEEE-WRPKPIRTLQGIRIIQAAAGAG 105

Query: 227 FTGFLTIRGHVHTCGSNTHGQLGHGDTLDRP--TPKSIAPLEEVGSVVQIAAGPSYMLAV 284
            T  +T  G V+  G ++ G+  +G    +    P+ +  L+ +  VVQ A G  +   +
Sbjct: 106 RTMLITDSGQVYAFGKDSFGEAEYGGQGSKTVIAPRLVESLKNI-FVVQAAIGNFFTAVL 164

Query: 285 TGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL---DSS 341
           +  G VY+F  GS+  LGH    ++++P  +       I VV+++AG  +++ L    S 
Sbjct: 165 SREGRVYTFSWGSDGKLGHHTDSNDMEPHPLLGALED-IPVVQIAAGYCYLLCLACQPSG 223

Query: 342 GYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQ---VCARKRKTFVLVDTGSVYG 398
             VY+ G G  G LGHG   D+  P  +   ++ L +Q   + A      V+   G V  
Sbjct: 224 MSVYSVGCGLGGKLGHGTRTDEKFPRLIEQFQT-LNLQPMVISAGAWHAAVVGRDGRVCT 282

Query: 399 FGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNE 458
           +GW  +G LG    G  +    P+++D+L       ++TG Y T VV + G ++ FG  E
Sbjct: 283 WGWGRYGCLG---HGNEECEAAPKVVDALTNVKAVHVATGDYTTFVVAEDGDVYSFGCGE 339

Query: 459 RAQLGHDTL 467
            A LGH+ +
Sbjct: 340 SASLGHNAV 348



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 49/144 (34%), Positives = 79/144 (54%), Gaps = 1/144 (0%)

Query: 330 AGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFV 389
           AG  H +A+ S G VY++G    G LGHG   ++  P+P+ +L+    +Q  A   +T +
Sbjct: 50  AGPGHSIAVTSKGDVYSFGSNSSGQLGHGTTEEEWRPKPIRTLQGIRIIQAAAGAGRTML 109

Query: 390 LVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRG 449
           + D+G VY FG   FG   +  +G S  V+ PR+++SL+   V Q + G + T V++  G
Sbjct: 110 ITDSGQVYAFGKDSFGEAEYGGQG-SKTVIAPRLVESLKNIFVVQAAIGNFFTAVLSREG 168

Query: 450 RLFGFGDNERAQLGHDTLRGCLEP 473
           R++ F      +LGH T    +EP
Sbjct: 169 RVYTFSWGSDGKLGHHTDSNDMEP 192


>gi|218191099|gb|EEC73526.1| hypothetical protein OsI_07916 [Oryza sativa Indica Group]
          Length = 634

 Score =  171 bits (432), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 144/477 (30%), Positives = 217/477 (45%), Gaps = 33/477 (6%)

Query: 8   FSIEELPSHLIFEILTSGRLSAVDLAHLELTSKTFGGSHGLYPQKFRSLVDLAASQLCAL 67
           F +   PS ++  +L++  L   DLA LE T   F       P    SL ++AA  +C  
Sbjct: 149 FPLAVSPS-IVLHVLSTCELDPKDLAALEATCTFFSKPANFEPNFALSLPEVAAFDMCHK 207

Query: 68  HSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLIS 127
             +   M++  + +L  RC G+WK VL+++ + E +           +I  G  H+++++
Sbjct: 208 RPMVKLMAQQEREQLKQRCGGSWKLVLKYIVARERNYS---------RIVAGPGHSIVVT 258

Query: 128 NS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFT 186
                +S G++  G LG G +T        I       + Q +        V  +G V+ 
Sbjct: 259 TKGDAYSFGANCWGQLGLG-DTEDRFKPCLIRSLQGIKITQAAVGSRQTMLVSDTGSVYA 317

Query: 187 CGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHG 246
            G  S       D    I  P++VE+LKGV   Q   G  F+ FL+  G V+T       
Sbjct: 318 FGKGSFVWEELSDAADHITTPKIVESLKGVFVVQAAIGGYFSAFLSREGQVYTISWGRTE 377

Query: 247 QLGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSY--MLAVTGNGV-VYSFGSGSNFCLG 302
           +LGH        P+ ++ PLE V  V QI+AG  Y  MLA    G+ VYS G G    LG
Sbjct: 378 RLGHSSDPSDVEPRLLSGPLEGV-LVAQISAGNCYLLMLAYQPTGMSVYSVGCGLGGKLG 436

Query: 303 HGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEID 362
           HG ++++   + I+ F     + V V+AG  H  AL   G V TWG G+ G LGHGDE  
Sbjct: 437 HGCKNNKGTTKLIEHFLTLSFNPVSVAAGTWHAAALGDDGRVCTWGWGHTGCLGHGDEEY 496

Query: 363 KTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLR-- 420
           + LP  +  L +  AV V   +  TFV+ D G  Y FG     ++GF +   +       
Sbjct: 497 RVLPTVVQGLSNVKAVHVSTGEYTTFVVSDNGDTYSFGSAESLNIGFQEDEEAADDADFS 556

Query: 421 -PRILDSLRA--HHVSQIST-----------GLYHTVVVTDRGRLFGFGDNERAQLG 463
            P +++SL+       QIST           G  HT  + + G+L+ FG   + QLG
Sbjct: 557 TPSLVESLKVLNDKAVQISTTNSSYWLNSEMGYPHTFALMESGKLYAFGGGIKGQLG 613



 Score = 75.1 bits (183), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 75/253 (29%), Positives = 115/253 (45%), Gaps = 15/253 (5%)

Query: 220 QVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPS 279
           ++ AG   +  +T +G  ++ G+N  GQLG GDT DR  P  I  L+ +  + Q A G  
Sbjct: 246 RIVAGPGHSIVVTTKGDAYSFGANCWGQLGLGDTEDRFKPCLIRSLQGI-KITQAAVGSR 304

Query: 280 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQ-PRAIQTFRRKGIHVVRVSAGDEHVVAL 338
             + V+  G VY+FG GS       +  D +  P+ +++   KG+ VV+ + G      L
Sbjct: 305 QTMLVSDTGSVYAFGKGSFVWEELSDAADHITTPKIVESL--KGVFVVQAAIGGYFSAFL 362

Query: 339 DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLS-SLKSHLAVQVCARKRKTFVLV--DTG- 394
              G VYT   G    LGH  +     P  LS  L+  L  Q+ A      +L    TG 
Sbjct: 363 SREGQVYTISWGRTERLGHSSDPSDVEPRLLSGPLEGVLVAQISAGNCYLLMLAYQPTGM 422

Query: 395 SVYGFGWMGFGSLGFPDRGVSDKVLRPRILD---SLRAHHVSQISTGLYHTVVVTDRGRL 451
           SVY  G    G LG    G  +     ++++   +L  + VS ++ G +H   + D GR+
Sbjct: 423 SVYSVGCGLGGKLG---HGCKNNKGTTKLIEHFLTLSFNPVS-VAAGTWHAAALGDDGRV 478

Query: 452 FGFGDNERAQLGH 464
             +G      LGH
Sbjct: 479 CTWGWGHTGCLGH 491



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 44/147 (29%), Positives = 72/147 (48%), Gaps = 2/147 (1%)

Query: 327 RVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRK 386
           R+ AG  H + + + G  Y++G    G LG GD  D+  P  + SL+     Q     R+
Sbjct: 246 RIVAGPGHSIVVTTKGDAYSFGANCWGQLGLGDTEDRFKPCLIRSLQGIKITQAAVGSRQ 305

Query: 387 TFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT 446
           T ++ DTGSVY FG   F      D   +D +  P+I++SL+   V Q + G Y +  ++
Sbjct: 306 TMLVSDTGSVYAFGKGSFVWEELSD--AADHITTPKIVESLKGVFVVQAAIGGYFSAFLS 363

Query: 447 DRGRLFGFGDNERAQLGHDTLRGCLEP 473
             G+++        +LGH +    +EP
Sbjct: 364 REGQVYTISWGRTERLGHSSDPSDVEP 390


>gi|374921939|gb|AFA26147.1| E3 ubiquitin-protein ligase HERC2-like protein, partial [Lolium
           perenne]
          Length = 102

 Score =  168 bits (426), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 77/102 (75%), Positives = 88/102 (86%)

Query: 379 QVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTG 438
           QVCARKRKTFVL D GSV  FGWMGFGSLGFPDRG SDKV++PR+LDSLR H+VSQISTG
Sbjct: 1   QVCARKRKTFVLTDEGSVIAFGWMGFGSLGFPDRGSSDKVMQPRVLDSLRGHYVSQISTG 60

Query: 439 LYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQE 480
           LYHTV VT++G +FGFGDNERAQLG + +R CL+PTEI   +
Sbjct: 61  LYHTVAVTNKGIVFGFGDNERAQLGQEYIRECLKPTEIMFHK 102


>gi|225438373|ref|XP_002274569.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Vitis
           vinifera]
 gi|296082603|emb|CBI21608.3| unnamed protein product [Vitis vinifera]
          Length = 445

 Score =  166 bits (419), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 119/353 (33%), Positives = 181/353 (51%), Gaps = 14/353 (3%)

Query: 116 ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           I+ G  H++ L+S + V S G    G LGHG +    +S T ++      VV V+   +H
Sbjct: 21  ISAGASHSVALLSGNVVCSWGRGEDGQLGHG-DAEDRLSPTYLSALDGHEVVSVTCGADH 79

Query: 175 AAFVLQS-GQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
                +S  QV++ G       GH +++  +F P+ ++AL G+  KQ+  G +    +T+
Sbjct: 80  TTAYSESFTQVYSWGWGDFGRLGHGNSS-DLFTPQPIKALHGLRIKQIACGDSHCLAVTM 138

Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
            G V + G N +GQLG G T D   P+ I   + V SV  +AAG  +  AVT +G +Y +
Sbjct: 139 DGEVQSWGRNQNGQLGLGTTEDSLVPQKIQAFQGV-SVKMVAAGAEHTAAVTEDGELYGW 197

Query: 294 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 353
           G G    LG G+++D L P  + T   +G+ +V+V+ G  H +++ SSG +YT+G    G
Sbjct: 198 GWGRYGNLGLGDRNDRLVPEKVSTV--EGVKMVKVACGWRHTISVSSSGGLYTYGWSKYG 255

Query: 354 ALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRG 413
            LGHGD  D   P  L +L+ +L  ++    R T  L   G +YG+GW  FG +     G
Sbjct: 256 QLGHGDFEDHLTPHKLEALQENLISEISGGWRHTMALTSDGKLYGWGWNKFGQV-----G 310

Query: 414 VSDKV--LRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 464
           V D V    P  +       V  IS G  HT+ VT+R  +F +G     QLGH
Sbjct: 311 VGDNVDHCSPVQVKFPHEQKVVHISCGWRHTLAVTERQNVFSWGRGTNGQLGH 363



 Score =  114 bits (286), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 75/257 (29%), Positives = 127/257 (49%), Gaps = 7/257 (2%)

Query: 221 VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 280
           ++AG + +  L     V + G    GQLGHGD  DR +P  ++ L+    VV +  G  +
Sbjct: 21  ISAGASHSVALLSGNVVCSWGRGEDGQLGHGDAEDRLSPTYLSALDGH-EVVSVTCGADH 79

Query: 281 MLAVTGNGV-VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 339
             A + +   VYS+G G    LGHG   D   P+ I+     G+ + +++ GD H +A+ 
Sbjct: 80  TTAYSESFTQVYSWGWGDFGRLGHGNSSDLFTPQPIKALH--GLRIKQIACGDSHCLAVT 137

Query: 340 SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGF 399
             G V +WG+   G LG G   D  +P+ + + +      V A    T  + + G +YG+
Sbjct: 138 MDGEVQSWGRNQNGQLGLGTTEDSLVPQKIQAFQGVSVKMVAAGAEHTAAVTEDGELYGW 197

Query: 400 GWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNER 459
           GW  +G+LG  DR   +  L P  + ++    + +++ G  HT+ V+  G L+ +G ++ 
Sbjct: 198 GWGRYGNLGLGDR---NDRLVPEKVSTVEGVKMVKVACGWRHTISVSSSGGLYTYGWSKY 254

Query: 460 AQLGHDTLRGCLEPTEI 476
            QLGH      L P ++
Sbjct: 255 GQLGHGDFEDHLTPHKL 271



 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 77/261 (29%), Positives = 126/261 (48%), Gaps = 6/261 (2%)

Query: 115 QITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
           QI  G  H L ++ +  V S G +  G LG G  T   +   +I       V  V+A   
Sbjct: 125 QIACGDSHCLAVTMDGEVQSWGRNQNGQLGLGT-TEDSLVPQKIQAFQGVSVKMVAAGAE 183

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
           H A V + G+++  G       G  D N  +  P  V  ++GV   +V  G   T  ++ 
Sbjct: 184 HTAAVTEDGELYGWGWGRYGNLGLGDRNDRLV-PEKVSTVEGVKMVKVACGWRHTISVSS 242

Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
            G ++T G + +GQLGHGD  D  TP  +  L+E   + +I+ G  + +A+T +G +Y +
Sbjct: 243 SGGLYTYGWSKYGQLGHGDFEDHLTPHKLEALQE-NLISEISGGWRHTMALTSDGKLYGW 301

Query: 294 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 353
           G      +G G+  D   P  ++    +   VV +S G  H +A+     V++WG+G  G
Sbjct: 302 GWNKFGQVGVGDNVDHCSPVQVKFPHEQ--KVVHISCGWRHTLAVTERQNVFSWGRGTNG 359

Query: 354 ALGHGDEIDKTLPEPLSSLKS 374
            LGHG+ ID+ +P+ +  L +
Sbjct: 360 QLGHGESIDRNIPKMIEVLSA 380



 Score = 92.4 bits (228), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 65/211 (30%), Positives = 97/211 (45%), Gaps = 6/211 (2%)

Query: 271 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 330
           V+ I+AG S+ +A+    VV S+G G +  LGHG+  D L P  +      G  VV V+ 
Sbjct: 18  VLLISAGASHSVALLSGNVVCSWGRGEDGQLGHGDAEDRLSPTYLSAL--DGHEVVSVTC 75

Query: 331 GDEHVVALDSS-GYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFV 389
           G +H  A   S   VY+WG G  G LGHG+  D   P+P+ +L      Q+         
Sbjct: 76  GADHTTAYSESFTQVYSWGWGDFGRLGHGNSSDLFTPQPIKALHGLRIKQIACGDSHCLA 135

Query: 390 LVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRG 449
           +   G V  +G    G LG    G ++  L P+ + + +   V  ++ G  HT  VT+ G
Sbjct: 136 VTMDGEVQSWGRNQNGQLGL---GTTEDSLVPQKIQAFQGVSVKMVAAGAEHTAAVTEDG 192

Query: 450 RLFGFGDNERAQLGHDTLRGCLEPTEIFIQE 480
            L+G+G      LG       L P ++   E
Sbjct: 193 ELYGWGWGRYGNLGLGDRNDRLVPEKVSTVE 223



 Score = 77.8 bits (190), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 62/209 (29%), Positives = 98/209 (46%), Gaps = 6/209 (2%)

Query: 116 ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           +  G  HT  ++ +  ++  G    G LG G    + V   +++      +V+V+    H
Sbjct: 178 VAAGAEHTAAVTEDGELYGWGWGRYGNLGLGDRNDRLVP-EKVSTVEGVKMVKVACGWRH 236

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 234
              V  SG ++T G +     GH D    +  P  +EAL+     +++ G   T  LT  
Sbjct: 237 TISVSSSGGLYTYGWSKYGQLGHGDFEDHL-TPHKLEALQENLISEISGGWRHTMALTSD 295

Query: 235 GHVHTCGSNTHGQLGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
           G ++  G N  GQ+G GD +D  +P  +  P E+   VV I+ G  + LAVT    V+S+
Sbjct: 296 GKLYGWGWNKFGQVGVGDNVDHCSPVQVKFPHEQ--KVVHISCGWRHTLAVTERQNVFSW 353

Query: 294 GSGSNFCLGHGEQHDELQPRAIQTFRRKG 322
           G G+N  LGHGE  D   P+ I+     G
Sbjct: 354 GRGTNGQLGHGESIDRNIPKMIEVLSADG 382



 Score = 50.1 bits (118), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 43/158 (27%), Positives = 74/158 (46%), Gaps = 3/158 (1%)

Query: 114 MQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +++  G  HT+ +S+S  +++ G S  G LGHG +    ++  ++       + ++S   
Sbjct: 228 VKVACGWRHTISVSSSGGLYTYGWSKYGQLGHG-DFEDHLTPHKLEALQENLISEISGGW 286

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            H   +   G+++  G N     G  D N     P  V+         ++ G   T  +T
Sbjct: 287 RHTMALTSDGKLYGWGWNKFGQVGVGD-NVDHCSPVQVKFPHEQKVVHISCGWRHTLAVT 345

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS 270
            R +V + G  T+GQLGHG+++DR  PK I  L   GS
Sbjct: 346 ERQNVFSWGRGTNGQLGHGESIDRNIPKMIEVLSADGS 383


>gi|357164242|ref|XP_003579993.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2-like
           [Brachypodium distachyon]
          Length = 548

 Score =  164 bits (416), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 149/477 (31%), Positives = 223/477 (46%), Gaps = 34/477 (7%)

Query: 17  LIFEILTSGRLSAVDLAHLELTSKTFGGSHGLYPQKFRSLVDLAASQLCALHSIYAGMSR 76
           ++  +L+S  L   DLA LE T K F       P    SL +LAA  +C   +++  M  
Sbjct: 60  VLLRVLSSCELDPKDLAALEATCKFFRDPANFPPDLALSLPELAAFDMCQERAMFKPMKP 119

Query: 77  NVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLIS-NSSVFSCG 135
             +  L  RC G+WK VLR++   E +    ++     Q+  G  H+++++    V+S G
Sbjct: 120 KEKEWLKQRCGGSWKLVLRYILVGEKNYRREKS-----QVIAGPGHSIVVTAKGDVYSFG 174

Query: 136 SSLCGVLGHGPETTQ---CVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCG-DNS 191
            +  G LG G    +   C+    I+      + Q +        V  +G V+T G D  
Sbjct: 175 VNCSGQLGLGDRENKFKPCL----ISSLQGIRITQAAVGLRRTMLVSDTGSVYTFGLDTF 230

Query: 192 SFCCGHRDTN-RPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGH 250
            +   +  +N   +  P+L+E+LKGV   Q + G  F+  L+  G V+T       +LGH
Sbjct: 231 GWLDQYGGSNGNCVNSPKLLESLKGVFVVQASIGGYFSAVLSREGRVYTFSWGRAERLGH 290

Query: 251 GDTLDRPTPKSIA-PLEEVGSVVQIAAGPSYMLAVTGNGV---VYSFGSGSNFCLGHGEQ 306
              L    P+ ++ PL++V  V QIAAG  Y+L ++ +     VYS G G    LGHG +
Sbjct: 291 SSELSDVEPRLLSGPLDDV-LVAQIAAGNCYLLLLSYHPTGMSVYSLGCGLGGKLGHGNK 349

Query: 307 HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEID-KTL 365
             E  P+ I  F+   I  + +SAG  H   +   G V+TWG    G LGHGD  D  TL
Sbjct: 350 DFEGVPKLIGHFQAFNIRPMSISAGAWHAAVMCRDGRVFTWGWNSSGCLGHGDSEDCVTL 409

Query: 366 PEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDK-VLRPR-- 422
           P  +  L +  AV V A +  TFV+ D G VY FG+ G  +LGF D    ++ VL P+  
Sbjct: 410 PRAVEGLNNVKAVHVSAGEWCTFVVADNGDVYSFGFRGSHNLGFQDNDAENEDVLPPKPA 469

Query: 423 -ILDSLRAHHVSQISTGLY---------HTVVVTDRGRLFGFGDNERAQLGHDTLRG 469
            +L  L    V    T  Y         HTV + + G ++ FG     QLG   + G
Sbjct: 470 TLLADLNERFVQISPTSAYNWNNAEQPHHTVALAESGIVYAFGGGSMGQLGVKLVEG 526



 Score = 80.1 bits (196), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 53/158 (33%), Positives = 81/158 (51%), Gaps = 3/158 (1%)

Query: 316 QTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSH 375
           + +RR+   V+   AG  H + + + G VY++G    G LG GD  +K  P  +SSL+  
Sbjct: 145 KNYRREKSQVI---AGPGHSIVVTAKGDVYSFGVNCSGQLGLGDRENKFKPCLISSLQGI 201

Query: 376 LAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQI 435
              Q     R+T ++ DTGSVY FG   FG L        + V  P++L+SL+   V Q 
Sbjct: 202 RITQAAVGLRRTMLVSDTGSVYTFGLDTFGWLDQYGGSNGNCVNSPKLLESLKGVFVVQA 261

Query: 436 STGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEP 473
           S G Y + V++  GR++ F      +LGH +    +EP
Sbjct: 262 SIGGYFSAVLSREGRVYTFSWGRAERLGHSSELSDVEP 299



 Score = 75.9 bits (185), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 80/261 (30%), Positives = 119/261 (45%), Gaps = 15/261 (5%)

Query: 220 QVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPS 279
           QV AG   +  +T +G V++ G N  GQLG GD  ++  P  I+ L+ +  + Q A G  
Sbjct: 153 QVIAGPGHSIVVTAKGDVYSFGVNCSGQLGLGDRENKFKPCLISSLQGI-RITQAAVGLR 211

Query: 280 YMLAVTGNGVVYSFGSGSNFCL---GHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVV 336
             + V+  G VY+FG  +   L   G    +    P+ +++   KG+ VV+ S G     
Sbjct: 212 RTMLVSDTGSVYTFGLDTFGWLDQYGGSNGNCVNSPKLLESL--KGVFVVQASIGGYFSA 269

Query: 337 ALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLS-SLKSHLAVQVCARKRKTFVLV--DT 393
            L   G VYT+  G    LGH  E+    P  LS  L   L  Q+ A      +L    T
Sbjct: 270 VLSREGRVYTFSWGRAERLGHSSELSDVEPRLLSGPLDDVLVAQIAAGNCYLLLLSYHPT 329

Query: 394 G-SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVS--QISTGLYHTVVVTDRGR 450
           G SVY  G    G LG  ++   D    P+++   +A ++    IS G +H  V+   GR
Sbjct: 330 GMSVYSLGCGLGGKLGHGNK---DFEGVPKLIGHFQAFNIRPMSISAGAWHAAVMCRDGR 386

Query: 451 LFGFGDNERAQLGHDTLRGCL 471
           +F +G N    LGH     C+
Sbjct: 387 VFTWGWNSSGCLGHGDSEDCV 407


>gi|357149503|ref|XP_003575134.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Brachypodium
           distachyon]
          Length = 448

 Score =  162 bits (411), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 114/354 (32%), Positives = 181/354 (51%), Gaps = 15/354 (4%)

Query: 116 ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVS--FTRINFPSAAHVVQVSASE 172
           ++ G  H++ L+S+ +V S G    G LGHG    + V    +  + P  A VV +  ++
Sbjct: 25  VSAGANHSVALLSSKAVCSWGRGEDGQLGHGDAEDRPVPTLLSGFDVPGIASVV-ICGAD 83

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
           +  A+  +  Q+++ G       GH +++  +F P+ +EAL+G+  KQ+  G +    +T
Sbjct: 84  HTTAYSDEQMQLYSWGWGDFGRLGHGNSSD-VFHPQPIEALQGIKIKQIACGDSHCLAVT 142

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
             G VH+ G N +GQLG G+T D   P+ I   E V  V  IAAG  +  A+  +G +Y 
Sbjct: 143 DAGQVHSWGRNQNGQLGLGNTEDSLLPQKIHAFEGV-CVKMIAAGAEHTAAILEDGDLYG 201

Query: 293 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 352
           +G G    LG G+++D L P  + +   +G  +V V+ G  H V + SSG +YT+G    
Sbjct: 202 WGWGQYGNLGLGDRNDRLVPEKVSSV--EGEKMVLVACGWRHTVTVSSSGDLYTYGWSKY 259

Query: 353 GALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDR 412
           G LGHGD  D  +P  L +LK     Q+    R T  +   G +YG+GW  FG +     
Sbjct: 260 GQLGHGDFEDHLVPHKLEALKDRFISQIAGGWRHTMAVAGDGKLYGWGWNKFGQV----- 314

Query: 413 GVSDKV--LRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 464
           GV+D V    P  +       V+Q++ G  HT+ +T+   +F +G     QLGH
Sbjct: 315 GVADNVDHCSPVQVIFPDEQKVAQVACGWRHTLALTENKNVFSWGRGTSGQLGH 368



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 108/322 (33%), Positives = 164/322 (50%), Gaps = 12/322 (3%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDT-NRPIFRPRLVEA--LKGVPCKQV 221
           V  VSA  NH+  +L S  V + G       GH D  +RP+  P L+    + G+    +
Sbjct: 22  VALVSAGANHSVALLSSKAVCSWGRGEDGQLGHGDAEDRPV--PTLLSGFDVPGIASVVI 79

Query: 222 TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 281
               + T +   +  +++ G    G+LGHG++ D   P+ I  L+ +  + QIA G S+ 
Sbjct: 80  CGADHTTAYSDEQMQLYSWGWGDFGRLGHGNSSDVFHPQPIEALQGI-KIKQIACGDSHC 138

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 341
           LAVT  G V+S+G   N  LG G   D L P+ I  F  +G+ V  ++AG EH  A+   
Sbjct: 139 LAVTDAGQVHSWGRNQNGQLGLGNTEDSLLPQKIHAF--EGVCVKMIAAGAEHTAAILED 196

Query: 342 GYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGW 401
           G +Y WG G  G LG GD  D+ +PE +SS++    V V    R T  +  +G +Y +GW
Sbjct: 197 GDLYGWGWGQYGNLGLGDRNDRLVPEKVSSVEGEKMVLVACGWRHTVTVSSSGDLYTYGW 256

Query: 402 MGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQ 461
             +G LG  D    +  L P  L++L+   +SQI+ G  HT+ V   G+L+G+G N+  Q
Sbjct: 257 SKYGQLGHGD---FEDHLVPHKLEALKDRFISQIAGGWRHTMAVAGDGKLYGWGWNKFGQ 313

Query: 462 LG-HDTLRGCLEPTEIFIQEME 482
           +G  D +  C     IF  E +
Sbjct: 314 VGVADNVDHCSPVQVIFPDEQK 335



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 76/259 (29%), Positives = 124/259 (47%), Gaps = 6/259 (2%)

Query: 115 QITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
           QI  G  H L ++++  V S G +  G LG G  T   +   +I+      V  ++A   
Sbjct: 130 QIACGDSHCLAVTDAGQVHSWGRNQNGQLGLG-NTEDSLLPQKIHAFEGVCVKMIAAGAE 188

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
           H A +L+ G ++  G       G  D N  +  P  V +++G     V  G   T  ++ 
Sbjct: 189 HTAAILEDGDLYGWGWGQYGNLGLGDRNDRLV-PEKVSSVEGEKMVLVACGWRHTVTVSS 247

Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
            G ++T G + +GQLGHGD  D   P  +  L++   + QIA G  + +AV G+G +Y +
Sbjct: 248 SGDLYTYGWSKYGQLGHGDFEDHLVPHKLEALKDR-FISQIAGGWRHTMAVAGDGKLYGW 306

Query: 294 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 353
           G      +G  +  D   P  +Q        V +V+ G  H +AL  +  V++WG+G  G
Sbjct: 307 GWNKFGQVGVADNVDHCSP--VQVIFPDEQKVAQVACGWRHTLALTENKNVFSWGRGTSG 364

Query: 354 ALGHGDEIDKTLPEPLSSL 372
            LGHG+ ID+  P+ + +L
Sbjct: 365 QLGHGEIIDRNTPKMIDAL 383



 Score = 89.0 bits (219), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 59/214 (27%), Positives = 97/214 (45%), Gaps = 3/214 (1%)

Query: 270 SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS 329
           +V  ++AG ++ +A+  +  V S+G G +  LGHG+  D   P  +  F   GI  V + 
Sbjct: 21  TVALVSAGANHSVALLSSKAVCSWGRGEDGQLGHGDAEDRPVPTLLSGFDVPGIASVVIC 80

Query: 330 AGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFV 389
             D      D    +Y+WG G  G LGHG+  D   P+P+ +L+     Q+         
Sbjct: 81  GADHTTAYSDEQMQLYSWGWGDFGRLGHGNSSDVFHPQPIEALQGIKIKQIACGDSHCLA 140

Query: 390 LVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRG 449
           + D G V+ +G    G LG    G ++  L P+ + +     V  I+ G  HT  + + G
Sbjct: 141 VTDAGQVHSWGRNQNGQLGL---GNTEDSLLPQKIHAFEGVCVKMIAAGAEHTAAILEDG 197

Query: 450 RLFGFGDNERAQLGHDTLRGCLEPTEIFIQEMEE 483
            L+G+G  +   LG       L P ++   E E+
Sbjct: 198 DLYGWGWGQYGNLGLGDRNDRLVPEKVSSVEGEK 231



 Score = 74.7 bits (182), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 62/209 (29%), Positives = 95/209 (45%), Gaps = 6/209 (2%)

Query: 116 ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           I  G  HT  ++ +  ++  G    G LG G    + V   +++      +V V+    H
Sbjct: 183 IAAGAEHTAAILEDGDLYGWGWGQYGNLGLGDRNDRLVP-EKVSSVEGEKMVLVACGWRH 241

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 234
              V  SG ++T G +     GH D    +  P  +EALK     Q+  G   T  +   
Sbjct: 242 TVTVSSSGDLYTYGWSKYGQLGHGDFEDHLV-PHKLEALKDRFISQIAGGWRHTMAVAGD 300

Query: 235 GHVHTCGSNTHGQLGHGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
           G ++  G N  GQ+G  D +D  +P + I P E+   V Q+A G  + LA+T N  V+S+
Sbjct: 301 GKLYGWGWNKFGQVGVADNVDHCSPVQVIFPDEQ--KVAQVACGWRHTLALTENKNVFSW 358

Query: 294 GSGSNFCLGHGEQHDELQPRAIQTFRRKG 322
           G G++  LGHGE  D   P+ I      G
Sbjct: 359 GRGTSGQLGHGEIIDRNTPKMIDALSLDG 387


>gi|218190962|gb|EEC73389.1| hypothetical protein OsI_07634 [Oryza sativa Indica Group]
          Length = 448

 Score =  162 bits (410), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 113/354 (31%), Positives = 175/354 (49%), Gaps = 12/354 (3%)

Query: 116 ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRI----NFPSAAHVVQVSA 170
           I+ G  H++ L+S   V S G    G LGHG    + V         + P     V +  
Sbjct: 25  ISAGASHSVALLSGGVVCSWGRGEDGQLGHGDAEDRPVPTVLTAAFDDAPGGVASVVICG 84

Query: 171 SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
           +++  A+  +  Q+++ G       GH +++  +F P+ ++AL+GV   Q+  G +    
Sbjct: 85  ADHTTAYSDEELQLYSWGWGDFGRLGHGNSSD-VFNPQPIQALQGVRITQIACGDSHCLA 143

Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 290
           +T+ GHVH+ G N +GQLG G+T D   P+ I   E V  V  IAAG  +  AVT +G +
Sbjct: 144 VTVAGHVHSWGRNQNGQLGLGNTEDSLLPQKIQAFEGV-RVKMIAAGAEHTAAVTEDGDL 202

Query: 291 YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKG 350
           Y +G G    LG G++ D L P  + +    G  +V V+ G  H + + SSG +YT+G  
Sbjct: 203 YGWGWGRYGNLGLGDRDDRLIPEKVSSV--NGQKMVLVACGWRHTITVSSSGSIYTYGWS 260

Query: 351 YCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFP 410
             G LGHGD  D  +P  L +LK     Q+    R T  L   G +YG+GW  FG +G  
Sbjct: 261 KYGQLGHGDFEDHLVPHKLEALKDTTISQISGGWRHTMALAADGKLYGWGWNKFGQVGVG 320

Query: 411 DRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 464
           D   ++    P  ++      V Q++ G  HT+ +T+   +F +G     QLGH
Sbjct: 321 D---NEDHCSPVQVNFPNEQKVVQVACGWRHTLALTEAKNVFSWGRGTSGQLGH 371



 Score =  156 bits (394), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 105/303 (34%), Positives = 156/303 (51%), Gaps = 10/303 (3%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDT-NRPI---FRPRLVEALKGVPCKQ 220
           VV +SA  +H+  +L  G V + G       GH D  +RP+         +A  GV    
Sbjct: 22  VVLISAGASHSVALLSGGVVCSWGRGEDGQLGHGDAEDRPVPTVLTAAFDDAPGGVASVV 81

Query: 221 VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 280
           +    + T +      +++ G    G+LGHG++ D   P+ I  L+ V  + QIA G S+
Sbjct: 82  ICGADHTTAYSDEELQLYSWGWGDFGRLGHGNSSDVFNPQPIQALQGV-RITQIACGDSH 140

Query: 281 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 340
            LAVT  G V+S+G   N  LG G   D L P+ IQ F  +G+ V  ++AG EH  A+  
Sbjct: 141 CLAVTVAGHVHSWGRNQNGQLGLGNTEDSLLPQKIQAF--EGVRVKMIAAGAEHTAAVTE 198

Query: 341 SGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 400
            G +Y WG G  G LG GD  D+ +PE +SS+     V V    R T  +  +GS+Y +G
Sbjct: 199 DGDLYGWGWGRYGNLGLGDRDDRLIPEKVSSVNGQKMVLVACGWRHTITVSSSGSIYTYG 258

Query: 401 WMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERA 460
           W  +G LG  D    +  L P  L++L+   +SQIS G  HT+ +   G+L+G+G N+  
Sbjct: 259 WSKYGQLGHGDF---EDHLVPHKLEALKDTTISQISGGWRHTMALAADGKLYGWGWNKFG 315

Query: 461 QLG 463
           Q+G
Sbjct: 316 QVG 318



 Score =  125 bits (315), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 81/273 (29%), Positives = 136/273 (49%), Gaps = 12/273 (4%)

Query: 211 EALKGVPCKQV---TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSI-APLE 266
           EA+   P + V   +AG + +  L   G V + G    GQLGHGD  DRP P  + A  +
Sbjct: 12  EAVPEAPERSVVLISAGASHSVALLSGGVVCSWGRGEDGQLGHGDAEDRPVPTVLTAAFD 71

Query: 267 EV--GSVVQIAAGPSYMLAVTGNGV-VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGI 323
           +   G    +  G  +  A +   + +YS+G G    LGHG   D   P+ IQ    +G+
Sbjct: 72  DAPGGVASVVICGADHTTAYSDEELQLYSWGWGDFGRLGHGNSSDVFNPQPIQAL--QGV 129

Query: 324 HVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCAR 383
            + +++ GD H +A+  +G+V++WG+   G LG G+  D  LP+ + + +      + A 
Sbjct: 130 RITQIACGDSHCLAVTVAGHVHSWGRNQNGQLGLGNTEDSLLPQKIQAFEGVRVKMIAAG 189

Query: 384 KRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV 443
              T  + + G +YG+GW  +G+LG  DR   D  L P  + S+    +  ++ G  HT+
Sbjct: 190 AEHTAAVTEDGDLYGWGWGRYGNLGLGDR---DDRLIPEKVSSVNGQKMVLVACGWRHTI 246

Query: 444 VVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 476
            V+  G ++ +G ++  QLGH      L P ++
Sbjct: 247 TVSSSGSIYTYGWSKYGQLGHGDFEDHLVPHKL 279



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 77/263 (29%), Positives = 127/263 (48%), Gaps = 10/263 (3%)

Query: 115 QITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
           QI  G  H L ++ +  V S G +  G LG G  T   +   +I       V  ++A   
Sbjct: 133 QIACGDSHCLAVTVAGHVHSWGRNQNGQLGLG-NTEDSLLPQKIQAFEGVRVKMIAAGAE 191

Query: 174 HAAFVLQSGQVFTCGDN--SSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
           H A V + G ++  G     +   G RD +R I  P  V ++ G     V  G   T  +
Sbjct: 192 HTAAVTEDGDLYGWGWGRYGNLGLGDRD-DRLI--PEKVSSVNGQKMVLVACGWRHTITV 248

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
           +  G ++T G + +GQLGHGD  D   P  +  L++  ++ QI+ G  + +A+  +G +Y
Sbjct: 249 SSSGSIYTYGWSKYGQLGHGDFEDHLVPHKLEALKDT-TISQISGGWRHTMALAADGKLY 307

Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 351
            +G      +G G+  D   P  +Q        VV+V+ G  H +AL  +  V++WG+G 
Sbjct: 308 GWGWNKFGQVGVGDNEDHCSP--VQVNFPNEQKVVQVACGWRHTLALTEAKNVFSWGRGT 365

Query: 352 CGALGHGDEIDKTLPEPLSSLKS 374
            G LGHG+ +D+ +P+ + +L S
Sbjct: 366 SGQLGHGEIVDRNIPKMIDALSS 388



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 62/209 (29%), Positives = 96/209 (45%), Gaps = 6/209 (2%)

Query: 116 ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           I  G  HT  ++ +  ++  G    G LG G    + +   +++  +   +V V+    H
Sbjct: 186 IAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRDDRLIP-EKVSSVNGQKMVLVACGWRH 244

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 234
              V  SG ++T G +     GH D    +  P  +EALK     Q++ G   T  L   
Sbjct: 245 TITVSSSGSIYTYGWSKYGQLGHGDFEDHLV-PHKLEALKDTTISQISGGWRHTMALAAD 303

Query: 235 GHVHTCGSNTHGQLGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
           G ++  G N  GQ+G GD  D  +P  +  P E+   VVQ+A G  + LA+T    V+S+
Sbjct: 304 GKLYGWGWNKFGQVGVGDNEDHCSPVQVNFPNEQ--KVVQVACGWRHTLALTEAKNVFSW 361

Query: 294 GSGSNFCLGHGEQHDELQPRAIQTFRRKG 322
           G G++  LGHGE  D   P+ I      G
Sbjct: 362 GRGTSGQLGHGEIVDRNIPKMIDALSSDG 390



 Score = 55.5 bits (132), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 48/159 (30%), Positives = 68/159 (42%), Gaps = 3/159 (1%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           +  G  HT+ +S+S S+++ G S  G LGHG      V   ++       + Q+S    H
Sbjct: 238 VACGWRHTITVSSSGSIYTYGWSKYGQLGHGDFEDHLVPH-KLEALKDTTISQISGGWRH 296

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 234
              +   G+++  G N     G  D N     P  V         QV  G   T  LT  
Sbjct: 297 TMALAADGKLYGWGWNKFGQVGVGD-NEDHCSPVQVNFPNEQKVVQVACGWRHTLALTEA 355

Query: 235 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
            +V + G  T GQLGHG+ +DR  PK I  L   GS  +
Sbjct: 356 KNVFSWGRGTSGQLGHGEIVDRNIPKMIDALSSDGSACK 394


>gi|115446671|ref|NP_001047115.1| Os02g0554100 [Oryza sativa Japonica Group]
 gi|50725773|dbj|BAD33304.1| putative UVB-resistance protein (UVR8) [Oryza sativa Japonica
           Group]
 gi|113536646|dbj|BAF09029.1| Os02g0554100 [Oryza sativa Japonica Group]
 gi|215697683|dbj|BAG91677.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 453

 Score =  162 bits (410), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 113/354 (31%), Positives = 175/354 (49%), Gaps = 12/354 (3%)

Query: 116 ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRI----NFPSAAHVVQVSA 170
           I+ G  H++ L+S   V S G    G LGHG    + V         + P     V +  
Sbjct: 30  ISAGASHSVALLSGGVVCSWGRGEDGQLGHGDAEDRPVPTVLTAAFDDAPGGVASVVICG 89

Query: 171 SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
           +++  A+  +  Q+++ G       GH +++  +F P+ ++AL+GV   Q+  G +    
Sbjct: 90  ADHTTAYSDEELQLYSWGWGDFGRLGHGNSSD-VFNPQPIQALQGVRITQIACGDSHCLA 148

Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 290
           +T+ GHVH+ G N +GQLG G+T D   P+ I   E V  V  IAAG  +  AVT +G +
Sbjct: 149 VTVAGHVHSWGRNQNGQLGLGNTEDSLLPQKIQAFEGV-RVKMIAAGAEHTAAVTEDGDL 207

Query: 291 YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKG 350
           Y +G G    LG G++ D L P  + +    G  +V V+ G  H + + SSG +YT+G  
Sbjct: 208 YGWGWGRYGNLGLGDRDDRLIPEKVSSV--NGQKMVLVACGWRHTITVSSSGSIYTYGWS 265

Query: 351 YCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFP 410
             G LGHGD  D  +P  L +LK     Q+    R T  L   G +YG+GW  FG +G  
Sbjct: 266 KYGQLGHGDFEDHLVPHKLEALKDTTISQISGGWRHTMALAADGKLYGWGWNKFGQVGVG 325

Query: 411 DRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 464
           D   ++    P  ++      V Q++ G  HT+ +T+   +F +G     QLGH
Sbjct: 326 D---NEDHCSPVQVNFPNEQKVVQVACGWRHTLALTEAKNVFSWGRGTSGQLGH 376



 Score =  155 bits (393), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 105/303 (34%), Positives = 156/303 (51%), Gaps = 10/303 (3%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDT-NRPI---FRPRLVEALKGVPCKQ 220
           VV +SA  +H+  +L  G V + G       GH D  +RP+         +A  GV    
Sbjct: 27  VVLISAGASHSVALLSGGVVCSWGRGEDGQLGHGDAEDRPVPTVLTAAFDDAPGGVASVV 86

Query: 221 VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 280
           +    + T +      +++ G    G+LGHG++ D   P+ I  L+ V  + QIA G S+
Sbjct: 87  ICGADHTTAYSDEELQLYSWGWGDFGRLGHGNSSDVFNPQPIQALQGV-RITQIACGDSH 145

Query: 281 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 340
            LAVT  G V+S+G   N  LG G   D L P+ IQ F  +G+ V  ++AG EH  A+  
Sbjct: 146 CLAVTVAGHVHSWGRNQNGQLGLGNTEDSLLPQKIQAF--EGVRVKMIAAGAEHTAAVTE 203

Query: 341 SGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 400
            G +Y WG G  G LG GD  D+ +PE +SS+     V V    R T  +  +GS+Y +G
Sbjct: 204 DGDLYGWGWGRYGNLGLGDRDDRLIPEKVSSVNGQKMVLVACGWRHTITVSSSGSIYTYG 263

Query: 401 WMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERA 460
           W  +G LG  D    +  L P  L++L+   +SQIS G  HT+ +   G+L+G+G N+  
Sbjct: 264 WSKYGQLGHGDF---EDHLVPHKLEALKDTTISQISGGWRHTMALAADGKLYGWGWNKFG 320

Query: 461 QLG 463
           Q+G
Sbjct: 321 QVG 323



 Score =  125 bits (314), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 81/273 (29%), Positives = 136/273 (49%), Gaps = 12/273 (4%)

Query: 211 EALKGVPCKQV---TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSI-APLE 266
           EA+   P + V   +AG + +  L   G V + G    GQLGHGD  DRP P  + A  +
Sbjct: 17  EAVPEAPERSVVLISAGASHSVALLSGGVVCSWGRGEDGQLGHGDAEDRPVPTVLTAAFD 76

Query: 267 EV--GSVVQIAAGPSYMLAVTGNGV-VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGI 323
           +   G    +  G  +  A +   + +YS+G G    LGHG   D   P+ IQ    +G+
Sbjct: 77  DAPGGVASVVICGADHTTAYSDEELQLYSWGWGDFGRLGHGNSSDVFNPQPIQAL--QGV 134

Query: 324 HVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCAR 383
            + +++ GD H +A+  +G+V++WG+   G LG G+  D  LP+ + + +      + A 
Sbjct: 135 RITQIACGDSHCLAVTVAGHVHSWGRNQNGQLGLGNTEDSLLPQKIQAFEGVRVKMIAAG 194

Query: 384 KRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV 443
              T  + + G +YG+GW  +G+LG  DR   D  L P  + S+    +  ++ G  HT+
Sbjct: 195 AEHTAAVTEDGDLYGWGWGRYGNLGLGDR---DDRLIPEKVSSVNGQKMVLVACGWRHTI 251

Query: 444 VVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 476
            V+  G ++ +G ++  QLGH      L P ++
Sbjct: 252 TVSSSGSIYTYGWSKYGQLGHGDFEDHLVPHKL 284



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 77/263 (29%), Positives = 127/263 (48%), Gaps = 10/263 (3%)

Query: 115 QITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
           QI  G  H L ++ +  V S G +  G LG G  T   +   +I       V  ++A   
Sbjct: 138 QIACGDSHCLAVTVAGHVHSWGRNQNGQLGLG-NTEDSLLPQKIQAFEGVRVKMIAAGAE 196

Query: 174 HAAFVLQSGQVFTCGDN--SSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
           H A V + G ++  G     +   G RD +R I  P  V ++ G     V  G   T  +
Sbjct: 197 HTAAVTEDGDLYGWGWGRYGNLGLGDRD-DRLI--PEKVSSVNGQKMVLVACGWRHTITV 253

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
           +  G ++T G + +GQLGHGD  D   P  +  L++  ++ QI+ G  + +A+  +G +Y
Sbjct: 254 SSSGSIYTYGWSKYGQLGHGDFEDHLVPHKLEALKDT-TISQISGGWRHTMALAADGKLY 312

Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 351
            +G      +G G+  D   P  +Q        VV+V+ G  H +AL  +  V++WG+G 
Sbjct: 313 GWGWNKFGQVGVGDNEDHCSP--VQVNFPNEQKVVQVACGWRHTLALTEAKNVFSWGRGT 370

Query: 352 CGALGHGDEIDKTLPEPLSSLKS 374
            G LGHG+ +D+ +P+ + +L S
Sbjct: 371 SGQLGHGEIVDRNIPKMIDALSS 393



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 62/209 (29%), Positives = 96/209 (45%), Gaps = 6/209 (2%)

Query: 116 ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           I  G  HT  ++ +  ++  G    G LG G    + +   +++  +   +V V+    H
Sbjct: 191 IAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRDDRLIP-EKVSSVNGQKMVLVACGWRH 249

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 234
              V  SG ++T G +     GH D    +  P  +EALK     Q++ G   T  L   
Sbjct: 250 TITVSSSGSIYTYGWSKYGQLGHGDFEDHLV-PHKLEALKDTTISQISGGWRHTMALAAD 308

Query: 235 GHVHTCGSNTHGQLGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
           G ++  G N  GQ+G GD  D  +P  +  P E+   VVQ+A G  + LA+T    V+S+
Sbjct: 309 GKLYGWGWNKFGQVGVGDNEDHCSPVQVNFPNEQ--KVVQVACGWRHTLALTEAKNVFSW 366

Query: 294 GSGSNFCLGHGEQHDELQPRAIQTFRRKG 322
           G G++  LGHGE  D   P+ I      G
Sbjct: 367 GRGTSGQLGHGEIVDRNIPKMIDALSSDG 395



 Score = 55.5 bits (132), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 48/159 (30%), Positives = 68/159 (42%), Gaps = 3/159 (1%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           +  G  HT+ +S+S S+++ G S  G LGHG      V   ++       + Q+S    H
Sbjct: 243 VACGWRHTITVSSSGSIYTYGWSKYGQLGHGDFEDHLVPH-KLEALKDTTISQISGGWRH 301

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 234
              +   G+++  G N     G  D N     P  V         QV  G   T  LT  
Sbjct: 302 TMALAADGKLYGWGWNKFGQVGVGD-NEDHCSPVQVNFPNEQKVVQVACGWRHTLALTEA 360

Query: 235 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
            +V + G  T GQLGHG+ +DR  PK I  L   GS  +
Sbjct: 361 KNVFSWGRGTSGQLGHGEIVDRNIPKMIDALSSDGSACK 399


>gi|449457319|ref|XP_004146396.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Cucumis
           sativus]
          Length = 438

 Score =  162 bits (409), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 116/324 (35%), Positives = 166/324 (51%), Gaps = 17/324 (5%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V+ +SA  +H+  +L    V + G       GH D    +  P  + AL G     VT G
Sbjct: 10  VLFISAGASHSVALLSGNIVCSWGRGEDGQLGHGDAEDRL-SPTQLSALDGHEIVSVTCG 68

Query: 225 LNFT-GFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
            + T  +   R  V++ G    G+LGHG++ D  TPK I  L  +  + QIA G S+ LA
Sbjct: 69  ADHTTAYSVARTEVYSWGWGDFGRLGHGNSSDLLTPKPIKALHGL-KIRQIACGDSHCLA 127

Query: 284 VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 343
           VT  G V S+G   N  LG G   D L P+ IQ F  +GI +  V+AG EH  A+   G 
Sbjct: 128 VTMEGEVQSWGRNQNGQLGLGTTEDSLVPQKIQAF--EGISIKMVAAGAEHTAAVTEDGE 185

Query: 344 VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 403
           ++ WG G  G LG GD  D+ +P+ +SS+     V V    R T  +   G +Y +GW  
Sbjct: 186 LFGWGWGRYGNLGLGDRNDRLVPQKVSSVDGDKMVMVACGWRHTISVSSLGGLYTYGWSK 245

Query: 404 FGSLG---FPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERA 460
           +G LG   F DR      L P  L++LR  ++SQIS G  HT+ +T  G+L+G+G N+  
Sbjct: 246 YGQLGHGDFEDR------LVPHRLEALRGDNISQISGGWRHTMALTTDGKLYGWGWNKFG 299

Query: 461 QLGH-DTLRGCLEPTEI-FIQEME 482
           Q+G  D +  C  P +I F Q+ +
Sbjct: 300 QVGAGDNIDHC-SPIQIKFPQDQK 322



 Score =  158 bits (399), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 110/351 (31%), Positives = 180/351 (51%), Gaps = 10/351 (2%)

Query: 116 ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           I+ G  H++ L+S + V S G    G LGHG +    +S T+++      +V V+   +H
Sbjct: 13  ISAGASHSVALLSGNIVCSWGRGEDGQLGHG-DAEDRLSPTQLSALDGHEIVSVTCGADH 71

Query: 175 A-AFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
             A+ +   +V++ G       GH +++  +  P+ ++AL G+  +Q+  G +    +T+
Sbjct: 72  TTAYSVARTEVYSWGWGDFGRLGHGNSS-DLLTPKPIKALHGLKIRQIACGDSHCLAVTM 130

Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
            G V + G N +GQLG G T D   P+ I   E + S+  +AAG  +  AVT +G ++ +
Sbjct: 131 EGEVQSWGRNQNGQLGLGTTEDSLVPQKIQAFEGI-SIKMVAAGAEHTAAVTEDGELFGW 189

Query: 294 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 353
           G G    LG G+++D L P+ + +    G  +V V+ G  H +++ S G +YT+G    G
Sbjct: 190 GWGRYGNLGLGDRNDRLVPQKVSSV--DGDKMVMVACGWRHTISVSSLGGLYTYGWSKYG 247

Query: 354 ALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRG 413
            LGHGD  D+ +P  L +L+     Q+    R T  L   G +YG+GW  FG +G  D  
Sbjct: 248 QLGHGDFEDRLVPHRLEALRGDNISQISGGWRHTMALTTDGKLYGWGWNKFGQVGAGD-- 305

Query: 414 VSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 464
            +     P  +   +   V QIS G  HT+ VTD+  +F +G     QLGH
Sbjct: 306 -NIDHCSPIQIKFPQDQKVIQISCGWRHTLAVTDKQNVFSWGRGTNGQLGH 355



 Score = 99.4 bits (246), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 77/259 (29%), Positives = 122/259 (47%), Gaps = 6/259 (2%)

Query: 115 QITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
           QI  G  H L ++    V S G +  G LG G  T   +   +I       +  V+A   
Sbjct: 117 QIACGDSHCLAVTMEGEVQSWGRNQNGQLGLG-TTEDSLVPQKIQAFEGISIKMVAAGAE 175

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
           H A V + G++F  G       G  D N  +  P+ V ++ G     V  G   T  ++ 
Sbjct: 176 HTAAVTEDGELFGWGWGRYGNLGLGDRNDRLV-PQKVSSVDGDKMVMVACGWRHTISVSS 234

Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
            G ++T G + +GQLGHGD  DR  P  +  L    ++ QI+ G  + +A+T +G +Y +
Sbjct: 235 LGGLYTYGWSKYGQLGHGDFEDRLVPHRLEALRG-DNISQISGGWRHTMALTTDGKLYGW 293

Query: 294 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 353
           G      +G G+  D   P  IQ    +   V+++S G  H +A+     V++WG+G  G
Sbjct: 294 GWNKFGQVGAGDNIDHCSP--IQIKFPQDQKVIQISCGWRHTLAVTDKQNVFSWGRGTNG 351

Query: 354 ALGHGDEIDKTLPEPLSSL 372
            LGHG+ +D+  P  L +L
Sbjct: 352 QLGHGESVDRNTPMILEAL 370



 Score = 82.0 bits (201), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 63/209 (30%), Positives = 97/209 (46%), Gaps = 6/209 (2%)

Query: 116 ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           +  G  HT  ++ +  +F  G    G LG G    + V   +++      +V V+    H
Sbjct: 170 VAAGAEHTAAVTEDGELFGWGWGRYGNLGLGDRNDRLVP-QKVSSVDGDKMVMVACGWRH 228

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 234
              V   G ++T G +     GH D    +  P  +EAL+G    Q++ G   T  LT  
Sbjct: 229 TISVSSLGGLYTYGWSKYGQLGHGDFEDRLV-PHRLEALRGDNISQISGGWRHTMALTTD 287

Query: 235 GHVHTCGSNTHGQLGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
           G ++  G N  GQ+G GD +D  +P  I  P ++   V+QI+ G  + LAVT    V+S+
Sbjct: 288 GKLYGWGWNKFGQVGAGDNIDHCSPIQIKFPQDQ--KVIQISCGWRHTLAVTDKQNVFSW 345

Query: 294 GSGSNFCLGHGEQHDELQPRAIQTFRRKG 322
           G G+N  LGHGE  D   P  ++     G
Sbjct: 346 GRGTNGQLGHGESVDRNTPMILEALSVDG 374


>gi|224152872|ref|XP_002337285.1| predicted protein [Populus trichocarpa]
 gi|222838689|gb|EEE77054.1| predicted protein [Populus trichocarpa]
          Length = 91

 Score =  161 bits (408), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 74/87 (85%), Positives = 83/87 (95%)

Query: 402 MGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQ 461
           MGFGSLGFPDRG+SDKV+RPR+LDSLRA HVSQISTGLYHTVVVT+RG++FGFGDNERAQ
Sbjct: 1   MGFGSLGFPDRGLSDKVMRPRVLDSLRARHVSQISTGLYHTVVVTNRGQMFGFGDNERAQ 60

Query: 462 LGHDTLRGCLEPTEIFIQEMEEDTGLA 488
           LGHDTLRGCL+PTEIF+QE  +DT LA
Sbjct: 61  LGHDTLRGCLQPTEIFVQETADDTDLA 87



 Score = 38.9 bits (89), Expect = 5.6,   Method: Compositional matrix adjust.
 Identities = 20/51 (39%), Positives = 30/51 (58%), Gaps = 1/51 (1%)

Query: 204 IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTL 254
           + RPR++++L+     Q++ GL  T  +T RG +   G N   QLGH DTL
Sbjct: 17  VMRPRVLDSLRARHVSQISTGLYHTVVVTNRGQMFGFGDNERAQLGH-DTL 66


>gi|115458498|ref|NP_001052849.1| Os04g0435700 [Oryza sativa Japonica Group]
 gi|32487442|emb|CAE02741.1| OSJNBa0006B20.1 [Oryza sativa Japonica Group]
 gi|113564420|dbj|BAF14763.1| Os04g0435700 [Oryza sativa Japonica Group]
 gi|125548381|gb|EAY94203.1| hypothetical protein OsI_15977 [Oryza sativa Indica Group]
 gi|125590466|gb|EAZ30816.1| hypothetical protein OsJ_14886 [Oryza sativa Japonica Group]
 gi|215704772|dbj|BAG94800.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 453

 Score =  161 bits (407), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 113/364 (31%), Positives = 181/364 (49%), Gaps = 10/364 (2%)

Query: 116 ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ--VSASE 172
           ++ G  H++ L++ + + S G    G LGHG    + V      F +AA  +   +  ++
Sbjct: 27  VSAGASHSVALLAGNVLCSWGRGEDGQLGHGDAEDRLVPTVLSGFDAAAPGITSVICGAD 86

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
           +  A+     QV++ G       GH +++  +F P+ V+AL+G+  KQ+  G +    +T
Sbjct: 87  HTTAYSEDEQQVYSWGWGDFGRLGHGNSSD-VFTPQPVKALQGIKIKQIACGDSHCLAVT 145

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
           + G V + G N +GQLG G T D   P+ I   E V  V  IAAG  +  AVT +G +Y 
Sbjct: 146 MAGEVQSWGRNQNGQLGLGTTEDSLLPQKIQSFEGV-CVKMIAAGAEHTAAVTEDGDLYG 204

Query: 293 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 352
           +G G    LG G+++D L P  + +   +G  +V ++ G  H + + SSG +YT+G    
Sbjct: 205 WGWGRYGNLGLGDRNDRLVPEKVSSV--EGEKMVLIACGWRHTITVSSSGSLYTYGWSKY 262

Query: 353 GALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDR 412
           G LGHGD  D  +P  L +LK     Q+    R T  L   G +YG+GW  FG +G  D 
Sbjct: 263 GQLGHGDFEDHLVPHKLEALKDSSISQISGGWRHTMALTSDGKLYGWGWNKFGQVGVGD- 321

Query: 413 GVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLE 472
             +D    P  +       V+Q++ G  HT+  T++  +F +G     QLGH  +    +
Sbjct: 322 --TDDHCFPVQVKFPEDQKVAQVACGWRHTLAFTEKKNVFSWGRGTSGQLGHGEIVDRNK 379

Query: 473 PTEI 476
           P  I
Sbjct: 380 PVMI 383



 Score =  150 bits (379), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 110/332 (33%), Positives = 167/332 (50%), Gaps = 14/332 (4%)

Query: 156 RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNR---PIFRPRLVEA 212
           R + P A  VV VSA  +H+  +L    + + G       GH D      P        A
Sbjct: 17  REDPPPA--VVLVSAGASHSVALLAGNVLCSWGRGEDGQLGHGDAEDRLVPTVLSGFDAA 74

Query: 213 LKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV 272
             G+    +    + T +      V++ G    G+LGHG++ D  TP+ +  L+ +  + 
Sbjct: 75  APGI-TSVICGADHTTAYSEDEQQVYSWGWGDFGRLGHGNSSDVFTPQPVKALQGI-KIK 132

Query: 273 QIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGD 332
           QIA G S+ LAVT  G V S+G   N  LG G   D L P+ IQ+F  +G+ V  ++AG 
Sbjct: 133 QIACGDSHCLAVTMAGEVQSWGRNQNGQLGLGTTEDSLLPQKIQSF--EGVCVKMIAAGA 190

Query: 333 EHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVD 392
           EH  A+   G +Y WG G  G LG GD  D+ +PE +SS++    V +    R T  +  
Sbjct: 191 EHTAAVTEDGDLYGWGWGRYGNLGLGDRNDRLVPEKVSSVEGEKMVLIACGWRHTITVSS 250

Query: 393 TGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLF 452
           +GS+Y +GW  +G LG  D    +  L P  L++L+   +SQIS G  HT+ +T  G+L+
Sbjct: 251 SGSLYTYGWSKYGQLGHGDF---EDHLVPHKLEALKDSSISQISGGWRHTMALTSDGKLY 307

Query: 453 GFGDNERAQLG-HDTLRGCLEPTEIFIQEMEE 483
           G+G N+  Q+G  DT   C  P ++   E ++
Sbjct: 308 GWGWNKFGQVGVGDTDDHCF-PVQVKFPEDQK 338



 Score = 91.3 bits (225), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 73/259 (28%), Positives = 121/259 (46%), Gaps = 6/259 (2%)

Query: 115 QITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
           QI  G  H L ++ +  V S G +  G LG G  T   +   +I       V  ++A   
Sbjct: 133 QIACGDSHCLAVTMAGEVQSWGRNQNGQLGLG-TTEDSLLPQKIQSFEGVCVKMIAAGAE 191

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
           H A V + G ++  G       G  D N  +  P  V +++G     +  G   T  ++ 
Sbjct: 192 HTAAVTEDGDLYGWGWGRYGNLGLGDRNDRLV-PEKVSSVEGEKMVLIACGWRHTITVSS 250

Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
            G ++T G + +GQLGHGD  D   P  +  L++  S+ QI+ G  + +A+T +G +Y +
Sbjct: 251 SGSLYTYGWSKYGQLGHGDFEDHLVPHKLEALKD-SSISQISGGWRHTMALTSDGKLYGW 309

Query: 294 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 353
           G      +G G+  D   P  +Q    +   V +V+ G  H +A      V++WG+G  G
Sbjct: 310 GWNKFGQVGVGDTDDHCFP--VQVKFPEDQKVAQVACGWRHTLAFTEKKNVFSWGRGTSG 367

Query: 354 ALGHGDEIDKTLPEPLSSL 372
            LGHG+ +D+  P  + +L
Sbjct: 368 QLGHGEIVDRNKPVMIDAL 386



 Score = 74.7 bits (182), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 62/208 (29%), Positives = 92/208 (44%), Gaps = 4/208 (1%)

Query: 116 ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           I  G  HT  ++ +  ++  G    G LG G    + V   +++      +V ++    H
Sbjct: 186 IAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRNDRLVP-EKVSSVEGEKMVLIACGWRH 244

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 234
              V  SG ++T G +     GH D    +  P  +EALK     Q++ G   T  LT  
Sbjct: 245 TITVSSSGSLYTYGWSKYGQLGHGDFEDHLV-PHKLEALKDSSISQISGGWRHTMALTSD 303

Query: 235 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 294
           G ++  G N  GQ+G GDT D   P  +    E   V Q+A G  + LA T    V+S+G
Sbjct: 304 GKLYGWGWNKFGQVGVGDTDDHCFPVQVK-FPEDQKVAQVACGWRHTLAFTEKKNVFSWG 362

Query: 295 SGSNFCLGHGEQHDELQPRAIQTFRRKG 322
            G++  LGHGE  D  +P  I      G
Sbjct: 363 RGTSGQLGHGEIVDRNKPVMIDALSPDG 390



 Score = 58.2 bits (139), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 53/196 (27%), Positives = 83/196 (42%), Gaps = 16/196 (8%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           I  G  HT+ +S+S S+++ G S  G LGHG      V   ++     + + Q+S    H
Sbjct: 238 IACGWRHTITVSSSGSLYTYGWSKYGQLGHGDFEDHLVPH-KLEALKDSSISQISGGWRH 296

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 234
              +   G+++  G N     G  DT+   F P  V+  +     QV  G   T   T +
Sbjct: 297 TMALTSDGKLYGWGWNKFGQVGVGDTDDHCF-PVQVKFPEDQKVAQVACGWRHTLAFTEK 355

Query: 235 GHVHTCGSNTHGQLGHGDTLDRPTP-------------KSIAPLEEVGSVVQIAAGPSYM 281
            +V + G  T GQLGHG+ +DR  P             K + P   V    ++   PS  
Sbjct: 356 KNVFSWGRGTSGQLGHGEIVDRNKPVMIDALSPDGPGCKKLEPSTAVPFAAKVWVSPSER 415

Query: 282 LAVTGNGVVYSFGSGS 297
            A+  +  V + G G+
Sbjct: 416 YAIVPDEKVPNSGEGT 431


>gi|242076270|ref|XP_002448071.1| hypothetical protein SORBIDRAFT_06g020490 [Sorghum bicolor]
 gi|241939254|gb|EES12399.1| hypothetical protein SORBIDRAFT_06g020490 [Sorghum bicolor]
          Length = 529

 Score =  161 bits (407), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 151/485 (31%), Positives = 212/485 (43%), Gaps = 41/485 (8%)

Query: 9   SIEELP----SHLIFEILTSGRLSAVDLAHLELTSKTFGGSHGLYPQKFRSLVDLAASQL 64
           S++++P      L+  +L+S  L   DLA LE+  + F       P    SL +LAA   
Sbjct: 35  SLQQIPLTSNPSLLLHVLSSYGLEPKDLAALEVACQFFRRPAKFEPDATLSLPELAAYDT 94

Query: 65  CALHSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNMQITTGRYHTL 124
           C   +I+  M +  +  L  RC G+WK VL +L   E +        G  ++  G  HT+
Sbjct: 95  CCQKAIFKSMEQKEKDSLKQRCGGSWKLVLTYLLVGEKN-----YHRGKSRVVAGPGHTI 149

Query: 125 LI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQ 183
            + S   V+S G++  G LG G    QC     I       + Q +        V  +G 
Sbjct: 150 AVTSKGDVYSFGANSSGQLGLGNTEEQCKP-CLIRSLQGIRITQAAVGSRRTMLVSDTGS 208

Query: 184 VFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 243
           V+  G +     G          P++VE+LKG+   Q + G +F+  L+  G V+T    
Sbjct: 209 VYVFGQD--IFAGLEFAGDYTSSPKVVESLKGIFVVQASVGGHFSAVLSREGQVYTFCWG 266

Query: 244 THGQLG-HGDTLD-RPTPKSIAPLEEVGSVVQIAAGPSY--MLAVTGNGV-VYSFGSGSN 298
              +LG H D  D  P   S+ P + +  V+QIAAG  Y  ML     G+ VYS G G  
Sbjct: 267 HDARLGHHSDPTDLEPRLLSVPPKDAL--VMQIAAGNCYLLMLVYQPTGMSVYSVGCGEG 324

Query: 299 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG-KGYCGALGH 357
             LGHG       PR IQ F+   +  V VSAG  H   L S G V+TWG     G LGH
Sbjct: 325 GKLGHGCTISLTIPRMIQQFKTLKVKPVSVSAGAFHCAVLASDGRVFTWGWDSDTGCLGH 384

Query: 358 GDEIDK-TLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSD 416
            D+ +   LP  ++ L S  A  +      TFV+ D G VY FG     +LG     V +
Sbjct: 385 DDKQEYVVLPTAVAGLGSVKATYISTGYCSTFVVTDNGDVYSFGCDHSRNLGV-KADVGE 443

Query: 417 KVLRPRILDSLRA---HHVSQIS---------------TGLYHTVVVTDRGRLFGFGDNE 458
            V  P++  +L       V QIS               T   HT V+T+ GRL+  G   
Sbjct: 444 DVRIPKLAANLNVSLNEKVVQISATNTWDWPSRSQNRITSECHTCVLTESGRLYSLGRGS 503

Query: 459 RAQLG 463
             QLG
Sbjct: 504 EGQLG 508



 Score = 75.9 bits (185), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 50/147 (34%), Positives = 76/147 (51%), Gaps = 4/147 (2%)

Query: 327 RVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRK 386
           RV AG  H +A+ S G VY++G    G LG G+  ++  P  + SL+     Q     R+
Sbjct: 140 RVVAGPGHTIAVTSKGDVYSFGANSSGQLGLGNTEEQCKPCLIRSLQGIRITQAAVGSRR 199

Query: 387 TFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT 446
           T ++ DTGSVY FG   F  L F      D    P++++SL+   V Q S G + + V++
Sbjct: 200 TMLVSDTGSVYVFGQDIFAGLEF----AGDYTSSPKVVESLKGIFVVQASVGGHFSAVLS 255

Query: 447 DRGRLFGFGDNERAQLGHDTLRGCLEP 473
             G+++ F     A+LGH +    LEP
Sbjct: 256 REGQVYTFCWGHDARLGHHSDPTDLEP 282


>gi|168008673|ref|XP_001757031.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162691902|gb|EDQ78262.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 420

 Score =  159 bits (402), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 118/378 (31%), Positives = 192/378 (50%), Gaps = 15/378 (3%)

Query: 114 MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           + ++ G  HT+ L+S   V S G    G LGHG    + +    I+      +  ++   
Sbjct: 17  ISVSAGASHTVALLSGDLVCSWGRGEDGQLGHGDAEERHLPLV-ISALDDCEISSITCGA 75

Query: 173 NHAAFVLQSGQ-VFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
           +H     +S + V++ G       GH +++  +F PR ++ LKG+  KQ+  G +    +
Sbjct: 76  DHTTARSESTRTVYSWGWGDFGRLGHGNSS-DLFIPRAIKGLKGLEIKQIACGDSHCLAI 134

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
           T  G VH+ G N +GQLG G T D   P  +A  E + +V  +AAG  +  AVT +G +Y
Sbjct: 135 TGDGEVHSWGRNQNGQLGLGHTEDVLVPNKVAAFEGI-AVKMLAAGAEHTAAVTESGKLY 193

Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 351
            +G G    LG G+++D L P  +     + +++V  + G  H +A+ +SG +YT+G   
Sbjct: 194 GWGWGRYGNLGLGDRNDRLVPGEVAAVPGEKMNLV--ACGWRHTIAVANSGNLYTFGWSK 251

Query: 352 CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 411
            G LGHGD  D  +P  + +LK+     V    R T  L + G +YG+GW  FG +G   
Sbjct: 252 YGQLGHGDFEDHLVPHQVQALKNKTIQAVSGGWRHTVALDEDGELYGWGWNKFGQVGC-- 309

Query: 412 RGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH-DTLRGC 470
            G +D    P+++  +    V++++ G  HTV +TDRG ++ +G     QLGH D +  C
Sbjct: 310 -GNTDDHNSPKLITGIVNEKVTRVTCGWRHTVAITDRGNVYSWGRGTSGQLGHGDAVDRC 368

Query: 471 LEPTEIFIQEMEEDTGLA 488
           + P  I   E+    GLA
Sbjct: 369 V-PKRI---ELLSADGLA 382



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 99/303 (32%), Positives = 152/303 (50%), Gaps = 14/303 (4%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V+ VSA  +H   +L    V + G       GH D       P ++ AL       +T G
Sbjct: 16  VISVSAGASHTVALLSGDLVCSWGRGEDGQLGHGDAEERHL-PLVISALDDCEISSITCG 74

Query: 225 LNFTGFLTIRGH----VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 280
            + T   T R      V++ G    G+LGHG++ D   P++I  L+ +  + QIA G S+
Sbjct: 75  ADHT---TARSESTRTVYSWGWGDFGRLGHGNSSDLFIPRAIKGLKGL-EIKQIACGDSH 130

Query: 281 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 340
            LA+TG+G V+S+G   N  LG G   D L P  +  F  +GI V  ++AG EH  A+  
Sbjct: 131 CLAITGDGEVHSWGRNQNGQLGLGHTEDVLVPNKVAAF--EGIAVKMLAAGAEHTAAVTE 188

Query: 341 SGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 400
           SG +Y WG G  G LG GD  D+ +P  ++++       V    R T  + ++G++Y FG
Sbjct: 189 SGKLYGWGWGRYGNLGLGDRNDRLVPGEVAAVPGEKMNLVACGWRHTIAVANSGNLYTFG 248

Query: 401 WMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERA 460
           W  +G LG  D    +  L P  + +L+   +  +S G  HTV + + G L+G+G N+  
Sbjct: 249 WSKYGQLGHGD---FEDHLVPHQVQALKNKTIQAVSGGWRHTVALDEDGELYGWGWNKFG 305

Query: 461 QLG 463
           Q+G
Sbjct: 306 QVG 308



 Score = 89.7 bits (221), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 64/259 (24%), Positives = 113/259 (43%), Gaps = 58/259 (22%)

Query: 271 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHG---EQH-------------------- 307
           V+ ++AG S+ +A+    +V S+G G +  LGHG   E+H                    
Sbjct: 16  VISVSAGASHTVALLSGDLVCSWGRGEDGQLGHGDAEERHLPLVISALDDCEISSITCGA 75

Query: 308 ------------------------------DELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
                                         D   PRAI+    KG+ + +++ GD H +A
Sbjct: 76  DHTTARSESTRTVYSWGWGDFGRLGHGNSSDLFIPRAIKGL--KGLEIKQIACGDSHCLA 133

Query: 338 LDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVY 397
           +   G V++WG+   G LG G   D  +P  +++ +      + A    T  + ++G +Y
Sbjct: 134 ITGDGEVHSWGRNQNGQLGLGHTEDVLVPNKVAAFEGIAVKMLAAGAEHTAAVTESGKLY 193

Query: 398 GFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDN 457
           G+GW  +G+LG  DR   +  L P  + ++    ++ ++ G  HT+ V + G L+ FG +
Sbjct: 194 GWGWGRYGNLGLGDR---NDRLVPGEVAAVPGEKMNLVACGWRHTIAVANSGNLYTFGWS 250

Query: 458 ERAQLGHDTLRGCLEPTEI 476
           +  QLGH      L P ++
Sbjct: 251 KYGQLGHGDFEDHLVPHQV 269



 Score = 68.6 bits (166), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 52/168 (30%), Positives = 80/168 (47%), Gaps = 8/168 (4%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           +  G  HT+ ++NS ++++ G S  G LGHG      V   ++       +  VS    H
Sbjct: 228 VACGWRHTIAVANSGNLYTFGWSKYGQLGHGDFEDHLVPH-QVQALKNKTIQAVSGGWRH 286

Query: 175 AAFVLQSGQVFTCGDNS--SFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
              + + G+++  G N      CG+ D +     P+L+  +      +VT G   T  +T
Sbjct: 287 TVALDEDGELYGWGWNKFGQVGCGNTDDHNS---PKLITGIVNEKVTRVTCGWRHTVAIT 343

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ-IAAGPS 279
            RG+V++ G  T GQLGHGD +DR  PK I  L   G   Q I + PS
Sbjct: 344 DRGNVYSWGRGTSGQLGHGDAVDRCVPKRIELLSADGLACQGIESSPS 391


>gi|403381060|ref|ZP_10923117.1| regulator of chromosome condensation rcc1, partial [Paenibacillus
           sp. JC66]
          Length = 851

 Score =  159 bits (401), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 118/347 (34%), Positives = 184/347 (53%), Gaps = 22/347 (6%)

Query: 130 SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGD 189
           SVFS G  + G LGHG +T   ++  +I     + +  ++A  NH+  + +SG V++ G 
Sbjct: 48  SVFSFGMGMYGKLGHG-DTANQLAPKKIE--GLSDIQAIAAGTNHSLALTKSGDVYSFGF 104

Query: 190 NSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLG 249
                 GH +T+  +  P+ +E L  +  + + AG   +  LT  G V++ G+ T G LG
Sbjct: 105 GLFGRLGHGNTDSQL-EPKKIEGLSDI--QAIAAGDFHSLALTKSGDVYSFGNGTSG-LG 160

Query: 250 HGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDE 309
           HG+T D+ TPK I  L +V +   IAAG ++ LA+T +G VYSFG G    LGHG+   +
Sbjct: 161 HGNTEDQSTPKKIESLSDVQA---IAAGGNHSLALTKSGDVYSFGFGLFGRLGHGDTDSQ 217

Query: 310 LQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPL 369
           L+P+ I+        +  ++AG  H +AL  SG VY++G G  G LGHGD  ++  P+ +
Sbjct: 218 LEPKKIEDLSD----IQAIAAGGNHSLALTKSGDVYSFGWGLHGQLGHGDTENQLTPKKI 273

Query: 370 SSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRA 429
             L    A  V A    +  L  +G VY FG    G LG    G +D  L P+ ++ L+ 
Sbjct: 274 EDLSDIQA--VAAGANHSLALTKSGEVYSFGRGNTGQLG---HGDTDDQLTPKKIEGLK- 327

Query: 430 HHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 476
             +  I+ G +H++ +T  G ++ FG N  + LGH      LEP +I
Sbjct: 328 -DIQAIAAGDFHSLALTKSGDVYSFG-NGTSGLGHGDTANQLEPKKI 372



 Score =  145 bits (365), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 115/341 (33%), Positives = 173/341 (50%), Gaps = 28/341 (8%)

Query: 48  LYPQKFRSLVDLAASQLCALHSIYAGMSRNVQ---IELLNRC-NGNWKRVLRFLQSVEHS 103
           L P+K   L D+ A      HS+    S +V      L  R  +GN    L   + +E  
Sbjct: 69  LAPKKIEGLSDIQAIAAGTNHSLALTKSGDVYSFGFGLFGRLGHGNTDSQLE-PKKIEGL 127

Query: 104 SDIVETSAGNMQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSA 162
           SDI         I  G +H+L ++ S  V+S G+   G LGHG    Q    T     S 
Sbjct: 128 SDI-------QAIAAGDFHSLALTKSGDVYSFGNGTSG-LGHGNTEDQS---TPKKIESL 176

Query: 163 AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 222
           + V  ++A  NH+  + +SG V++ G       GH DT+  +  P+ +E L  +  + + 
Sbjct: 177 SDVQAIAAGGNHSLALTKSGDVYSFGFGLFGRLGHGDTDSQL-EPKKIEDLSDI--QAIA 233

Query: 223 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 282
           AG N +  LT  G V++ G   HGQLGHGDT ++ TPK I   E++  +  +AAG ++ L
Sbjct: 234 AGGNHSLALTKSGDVYSFGWGLHGQLGHGDTENQLTPKKI---EDLSDIQAVAAGANHSL 290

Query: 283 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
           A+T +G VYSFG G+   LGHG+  D+L P+ I+  +     +  ++AGD H +AL  SG
Sbjct: 291 ALTKSGEVYSFGRGNTGQLGHGDTDDQLTPKKIEGLKD----IQAIAAGDFHSLALTKSG 346

Query: 343 YVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCAR 383
            VY++G G  G LGHGD  ++  P+ +  L    A+   A 
Sbjct: 347 DVYSFGNGTSG-LGHGDTANQLEPKKIEGLTDIQAIAAGAN 386



 Score =  139 bits (350), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 102/306 (33%), Positives = 154/306 (50%), Gaps = 22/306 (7%)

Query: 171 SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
           SE +A  V     VF+ G       GH DT   +  P+ +E L  +  + + AG N +  
Sbjct: 40  SETNANLV----SVFSFGMGMYGKLGHGDTANQL-APKKIEGLSDI--QAIAAGTNHSLA 92

Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 290
           LT  G V++ G    G+LGHG+T  +  PK I  L ++ +   IAAG  + LA+T +G V
Sbjct: 93  LTKSGDVYSFGFGLFGRLGHGNTDSQLEPKKIEGLSDIQA---IAAGDFHSLALTKSGDV 149

Query: 291 YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKG 350
           YSFG+G++  LGHG   D+  P+ I++       V  ++AG  H +AL  SG VY++G G
Sbjct: 150 YSFGNGTS-GLGHGNTEDQSTPKKIESLSD----VQAIAAGGNHSLALTKSGDVYSFGFG 204

Query: 351 YCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFP 410
             G LGHGD   +  P+ +  L    A+   A    +  L  +G VY FGW   G LG  
Sbjct: 205 LFGRLGHGDTDSQLEPKKIEDLSDIQAI--AAGGNHSLALTKSGDVYSFGWGLHGQLG-- 260

Query: 411 DRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGC 470
             G ++  L P+ ++ L    +  ++ G  H++ +T  G ++ FG     QLGH      
Sbjct: 261 -HGDTENQLTPKKIEDLS--DIQAVAAGANHSLALTKSGEVYSFGRGNTGQLGHGDTDDQ 317

Query: 471 LEPTEI 476
           L P +I
Sbjct: 318 LTPKKI 323


>gi|147782117|emb|CAN67581.1| hypothetical protein VITISV_010346 [Vitis vinifera]
          Length = 423

 Score =  159 bits (401), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 116/353 (32%), Positives = 176/353 (49%), Gaps = 26/353 (7%)

Query: 116 ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           I+ G  H++ L+  + V S G    G LGHG +    +S T ++      VV V+   +H
Sbjct: 21  ISAGASHSVALLXGNVVCSWGRGEDGQLGHG-DAEDRLSPTYLSALDGHEVVSVTCGADH 79

Query: 175 AAFVLQS-GQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
                +S  QV++ G +             +F P+ ++AL G+  KQ+  G +    +T+
Sbjct: 80  TTAYSESFTQVYSWGCD-------------LFTPQPIKALHGLRIKQIACGDSHCLAVTM 126

Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
            G V + G N +GQLG G T D   P+ I   + V SV  +AAG  +  AVT +G +Y +
Sbjct: 127 DGEVQSWGRNQNGQLGLGTTEDSLVPQKIQAFQGV-SVKMVAAGAEHTAAVTEDGELYGW 185

Query: 294 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 353
           G G    LG G+++D L P  + T   +G+ +V+V+ G  H +++ SSG +YT+G    G
Sbjct: 186 GWGRYGNLGLGDRNDRLVPEKVSTV--EGVKMVKVACGWRHTISVSSSGGLYTYGWSKYG 243

Query: 354 ALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRG 413
            LGHGD  D   P  L +L+ +L  ++    R T  L   G +YG+GW  FG +     G
Sbjct: 244 QLGHGDFEDHLTPHKLEALQENLISEISGGWRHTMALTSDGKLYGWGWNKFGQV-----G 298

Query: 414 VSDKV--LRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 464
           V D V    P  +       V  IS G  HT+ VT+R  +F +G     QLGH
Sbjct: 299 VGDNVDHCSPVQVKFPHEQKVVHISCGWRHTLAVTERQNVFSWGRGTNGQLGH 351



 Score =  103 bits (256), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 77/261 (29%), Positives = 126/261 (48%), Gaps = 6/261 (2%)

Query: 115 QITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
           QI  G  H L ++ +  V S G +  G LG G  T   +   +I       V  V+A   
Sbjct: 113 QIACGDSHCLAVTMDGEVQSWGRNQNGQLGLGT-TEDSLVPQKIQAFQGVSVKMVAAGAE 171

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
           H A V + G+++  G       G  D N  +  P  V  ++GV   +V  G   T  ++ 
Sbjct: 172 HTAAVTEDGELYGWGWGRYGNLGLGDRNDRLV-PEKVSTVEGVKMVKVACGWRHTISVSS 230

Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
            G ++T G + +GQLGHGD  D  TP  +  L+E   + +I+ G  + +A+T +G +Y +
Sbjct: 231 SGGLYTYGWSKYGQLGHGDFEDHLTPHKLEALQE-NLISEISGGWRHTMALTSDGKLYGW 289

Query: 294 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 353
           G      +G G+  D   P  ++    +   VV +S G  H +A+     V++WG+G  G
Sbjct: 290 GWNKFGQVGVGDNVDHCSPVQVKFPHEQ--KVVHISCGWRHTLAVTERQNVFSWGRGTNG 347

Query: 354 ALGHGDEIDKTLPEPLSSLKS 374
            LGHG+ ID+ +P+ +  L +
Sbjct: 348 QLGHGESIDRNIPKMIEVLSA 368



 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 70/257 (27%), Positives = 122/257 (47%), Gaps = 19/257 (7%)

Query: 221 VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 280
           ++AG + +  L     V + G    GQLGHGD  DR +P  ++ L+    VV +  G  +
Sbjct: 21  ISAGASHSVALLXGNVVCSWGRGEDGQLGHGDAEDRLSPTYLSALDG-HEVVSVTCGADH 79

Query: 281 MLAVTGNGV-VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 339
             A + +   VYS+G             D   P+ I+     G+ + +++ GD H +A+ 
Sbjct: 80  TTAYSESFTQVYSWGC------------DLFTPQPIKALH--GLRIKQIACGDSHCLAVT 125

Query: 340 SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGF 399
             G V +WG+   G LG G   D  +P+ + + +      V A    T  + + G +YG+
Sbjct: 126 MDGEVQSWGRNQNGQLGLGTTEDSLVPQKIQAFQGVSVKMVAAGAEHTAAVTEDGELYGW 185

Query: 400 GWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNER 459
           GW  +G+LG  DR   +  L P  + ++    + +++ G  HT+ V+  G L+ +G ++ 
Sbjct: 186 GWGRYGNLGLGDR---NDRLVPEKVSTVEGVKMVKVACGWRHTISVSSSGGLYTYGWSKY 242

Query: 460 AQLGHDTLRGCLEPTEI 476
            QLGH      L P ++
Sbjct: 243 GQLGHGDFEDHLTPHKL 259



 Score = 77.4 bits (189), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 62/209 (29%), Positives = 98/209 (46%), Gaps = 6/209 (2%)

Query: 116 ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           +  G  HT  ++ +  ++  G    G LG G    + V   +++      +V+V+    H
Sbjct: 166 VAAGAEHTAAVTEDGELYGWGWGRYGNLGLGDRNDRLVP-EKVSTVEGVKMVKVACGWRH 224

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 234
              V  SG ++T G +     GH D    +  P  +EAL+     +++ G   T  LT  
Sbjct: 225 TISVSSSGGLYTYGWSKYGQLGHGDFEDHL-TPHKLEALQENLISEISGGWRHTMALTSD 283

Query: 235 GHVHTCGSNTHGQLGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
           G ++  G N  GQ+G GD +D  +P  +  P E+   VV I+ G  + LAVT    V+S+
Sbjct: 284 GKLYGWGWNKFGQVGVGDNVDHCSPVQVKFPHEQ--KVVHISCGWRHTLAVTERQNVFSW 341

Query: 294 GSGSNFCLGHGEQHDELQPRAIQTFRRKG 322
           G G+N  LGHGE  D   P+ I+     G
Sbjct: 342 GRGTNGQLGHGESIDRNIPKMIEVLSADG 370



 Score = 65.9 bits (159), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 49/153 (32%), Positives = 67/153 (43%), Gaps = 16/153 (10%)

Query: 325 VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQV-CAR 383
           V+ +SAG  H VAL     V +WG+G  G LGHGD  D+  P  LS+L  H  V V C  
Sbjct: 18  VLLISAGASHSVALLXGNVVCSWGRGEDGQLGHGDAEDRLSPTYLSALDGHEVVSVTCGA 77

Query: 384 KRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV 443
              T        VY +G                 +  P+ + +L    + QI+ G  H +
Sbjct: 78  DHTTAYSESFTQVYSWG---------------CDLFTPQPIKALHGLRIKQIACGDSHCL 122

Query: 444 VVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 476
            VT  G +  +G N+  QLG  T    L P +I
Sbjct: 123 AVTMDGEVQSWGRNQNGQLGLGTTEDSLVPQKI 155



 Score = 50.1 bits (118), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 43/158 (27%), Positives = 74/158 (46%), Gaps = 3/158 (1%)

Query: 114 MQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +++  G  HT+ +S+S  +++ G S  G LGHG +    ++  ++       + ++S   
Sbjct: 216 VKVACGWRHTISVSSSGGLYTYGWSKYGQLGHG-DFEDHLTPHKLEALQENLISEISGGW 274

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            H   +   G+++  G N     G  D N     P  V+         ++ G   T  +T
Sbjct: 275 RHTMALTSDGKLYGWGWNKFGQVGVGD-NVDHCSPVQVKFPHEQKVVHISCGWRHTLAVT 333

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS 270
            R +V + G  T+GQLGHG+++DR  PK I  L   GS
Sbjct: 334 ERQNVFSWGRGTNGQLGHGESIDRNIPKMIEVLSADGS 371


>gi|226495309|ref|NP_001141147.1| putative regulator of chromosome condensation (RCC1) family protein
           [Zea mays]
 gi|194702882|gb|ACF85525.1| unknown [Zea mays]
 gi|224030327|gb|ACN34239.1| unknown [Zea mays]
 gi|414587150|tpg|DAA37721.1| TPA: putative regulator of chromosome condensation (RCC1) family
           protein [Zea mays]
          Length = 443

 Score =  158 bits (399), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 110/370 (29%), Positives = 181/370 (48%), Gaps = 10/370 (2%)

Query: 116 ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           ++ G  H++ L++ + + S G    G LGHG    + V      F + A    +  +++ 
Sbjct: 18  VSAGASHSVALLTGNVLCSWGRGEDGQLGHGDAEDRLVPTVLSGFDAPAITSVICGADHT 77

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 234
            A+     QV++ G       GH +++  +F P+ V+AL+G+  KQ+  G +    +T+ 
Sbjct: 78  TAYSEDELQVYSWGWGDFGRLGHGNSSD-VFTPQPVKALQGLKIKQIACGDSHCLAVTMA 136

Query: 235 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 294
           G V + G N +GQLG G T D   P+ I   E V  V  IAAG  +  AVT +G +Y +G
Sbjct: 137 GEVQSWGRNQNGQLGLGTTEDSLLPQKIQAFESV-CVKMIAAGAEHTAAVTEDGDLYGWG 195

Query: 295 SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGA 354
            G    LG G+++D L P  + +   +G  +V V+ G  H + +  SG +YT+G    G 
Sbjct: 196 WGRYGNLGLGDRNDRLLPEKVSSV--EGEKMVLVACGWRHTITVSDSGNLYTYGWSKYGQ 253

Query: 355 LGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGV 414
           LGHGD  D  +P  + +LK     Q+    R T  L   G +YG+GW  FG +G    G 
Sbjct: 254 LGHGDFEDHLVPHKVEALKDSTISQISGGWRHTMALTSEGKLYGWGWNKFGQVGV---GN 310

Query: 415 SDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPT 474
           +D    P  +       +SQ++ G  HT+ ++++  +F +G     QLG+  +      T
Sbjct: 311 NDDHSSPGQVSFPEDQKISQVACGWRHTLALSEKKNVFSWGRGTSGQLGNGEI--VDRNT 368

Query: 475 EIFIQEMEED 484
            + I  +  D
Sbjct: 369 PVLIDALSSD 378



 Score =  151 bits (382), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 102/300 (34%), Positives = 154/300 (51%), Gaps = 8/300 (2%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           VV VSA  +H+  +L    + + G       GH D    +  P ++          V  G
Sbjct: 15  VVLVSAGASHSVALLTGNVLCSWGRGEDGQLGHGDAEDRLV-PTVLSGFDAPAITSVICG 73

Query: 225 LNFT-GFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
            + T  +      V++ G    G+LGHG++ D  TP+ +  L+ +  + QIA G S+ LA
Sbjct: 74  ADHTTAYSEDELQVYSWGWGDFGRLGHGNSSDVFTPQPVKALQGL-KIKQIACGDSHCLA 132

Query: 284 VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 343
           VT  G V S+G   N  LG G   D L P+ IQ F  + + V  ++AG EH  A+   G 
Sbjct: 133 VTMAGEVQSWGRNQNGQLGLGTTEDSLLPQKIQAF--ESVCVKMIAAGAEHTAAVTEDGD 190

Query: 344 VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 403
           +Y WG G  G LG GD  D+ LPE +SS++    V V    R T  + D+G++Y +GW  
Sbjct: 191 LYGWGWGRYGNLGLGDRNDRLLPEKVSSVEGEKMVLVACGWRHTITVSDSGNLYTYGWSK 250

Query: 404 FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 463
           +G LG  D    +  L P  +++L+   +SQIS G  HT+ +T  G+L+G+G N+  Q+G
Sbjct: 251 YGQLGHGDF---EDHLVPHKVEALKDSTISQISGGWRHTMALTSEGKLYGWGWNKFGQVG 307



 Score = 99.0 bits (245), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 67/265 (25%), Positives = 116/265 (43%), Gaps = 54/265 (20%)

Query: 263 APLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRR-- 320
           AP     +VV ++AG S+ +A+    V+ S+G G +  LGHG+  D L P  +  F    
Sbjct: 7   APDSPPQTVVLVSAGASHSVALLTGNVLCSWGRGEDGQLGHGDAEDRLVPTVLSGFDAPA 66

Query: 321 -------------------------------------------------KGIHVVRVSAG 331
                                                            +G+ + +++ G
Sbjct: 67  ITSVICGADHTTAYSEDELQVYSWGWGDFGRLGHGNSSDVFTPQPVKALQGLKIKQIACG 126

Query: 332 DEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 391
           D H +A+  +G V +WG+   G LG G   D  LP+ + + +S     + A    T  + 
Sbjct: 127 DSHCLAVTMAGEVQSWGRNQNGQLGLGTTEDSLLPQKIQAFESVCVKMIAAGAEHTAAVT 186

Query: 392 DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRL 451
           + G +YG+GW  +G+LG  DR  +D++L P  + S+    +  ++ G  HT+ V+D G L
Sbjct: 187 EDGDLYGWGWGRYGNLGLGDR--NDRLL-PEKVSSVEGEKMVLVACGWRHTITVSDSGNL 243

Query: 452 FGFGDNERAQLGHDTLRGCLEPTEI 476
           + +G ++  QLGH      L P ++
Sbjct: 244 YTYGWSKYGQLGHGDFEDHLVPHKV 268



 Score = 91.3 bits (225), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 73/261 (27%), Positives = 122/261 (46%), Gaps = 6/261 (2%)

Query: 115 QITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
           QI  G  H L ++ +  V S G +  G LG G  T   +   +I    +  V  ++A   
Sbjct: 122 QIACGDSHCLAVTMAGEVQSWGRNQNGQLGLG-TTEDSLLPQKIQAFESVCVKMIAAGAE 180

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
           H A V + G ++  G       G  D N  +  P  V +++G     V  G   T  ++ 
Sbjct: 181 HTAAVTEDGDLYGWGWGRYGNLGLGDRNDRLL-PEKVSSVEGEKMVLVACGWRHTITVSD 239

Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
            G+++T G + +GQLGHGD  D   P  +  L++  ++ QI+ G  + +A+T  G +Y +
Sbjct: 240 SGNLYTYGWSKYGQLGHGDFEDHLVPHKVEALKD-STISQISGGWRHTMALTSEGKLYGW 298

Query: 294 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 353
           G      +G G   D   P  +     + I   +V+ G  H +AL     V++WG+G  G
Sbjct: 299 GWNKFGQVGVGNNDDHSSPGQVSFPEDQKIS--QVACGWRHTLALSEKKNVFSWGRGTSG 356

Query: 354 ALGHGDEIDKTLPEPLSSLKS 374
            LG+G+ +D+  P  + +L S
Sbjct: 357 QLGNGEIVDRNTPVLIDALSS 377



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 58/208 (27%), Positives = 93/208 (44%), Gaps = 4/208 (1%)

Query: 116 ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           I  G  HT  ++ +  ++  G    G LG G    + +   +++      +V V+    H
Sbjct: 175 IAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRNDRLLP-EKVSSVEGEKMVLVACGWRH 233

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 234
              V  SG ++T G +     GH D    +  P  VEALK     Q++ G   T  LT  
Sbjct: 234 TITVSDSGNLYTYGWSKYGQLGHGDFEDHLV-PHKVEALKDSTISQISGGWRHTMALTSE 292

Query: 235 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 294
           G ++  G N  GQ+G G+  D  +P  ++   E   + Q+A G  + LA++    V+S+G
Sbjct: 293 GKLYGWGWNKFGQVGVGNNDDHSSPGQVS-FPEDQKISQVACGWRHTLALSEKKNVFSWG 351

Query: 295 SGSNFCLGHGEQHDELQPRAIQTFRRKG 322
            G++  LG+GE  D   P  I      G
Sbjct: 352 RGTSGQLGNGEIVDRNTPVLIDALSSDG 379



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 44/161 (27%), Positives = 72/161 (44%), Gaps = 7/161 (4%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           +  G  HT+ +S+S ++++ G S  G LGHG      V   ++     + + Q+S    H
Sbjct: 227 VACGWRHTITVSDSGNLYTYGWSKYGQLGHGDFEDHLVPH-KVEALKDSTISQISGGWRH 285

Query: 175 AAFVLQSGQVFTCGDNS--SFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
              +   G+++  G N       G+ D +     P  V   +     QV  G   T  L+
Sbjct: 286 TMALTSEGKLYGWGWNKFGQVGVGNNDDHS---SPGQVSFPEDQKISQVACGWRHTLALS 342

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
            + +V + G  T GQLG+G+ +DR TP  I  L   GS  +
Sbjct: 343 EKKNVFSWGRGTSGQLGNGEIVDRNTPVLIDALSSDGSACK 383


>gi|297797389|ref|XP_002866579.1| UVB-resistance 8 [Arabidopsis lyrata subsp. lyrata]
 gi|297312414|gb|EFH42838.1| UVB-resistance 8 [Arabidopsis lyrata subsp. lyrata]
          Length = 440

 Score =  158 bits (399), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 112/350 (32%), Positives = 175/350 (50%), Gaps = 10/350 (2%)

Query: 116 ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           I+ G  H++ L+S   V S G    G LGHG +     S T+++      +V V+   +H
Sbjct: 20  ISAGASHSVALLSGDIVCSWGRGEDGQLGHG-DAEDRPSPTQLSALDGHQIVSVTCGADH 78

Query: 175 AAFVLQSG-QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
                QSG +V++ G       GH +++  +F P  ++AL G+  KQ+  G +    +T+
Sbjct: 79  TVAYSQSGMEVYSWGWGDFGRLGHGNSSD-LFTPLPIKALHGIRIKQIACGDSHCLAVTM 137

Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
            G V + G N +GQLG GDT D   P+ I   E +  +  +AAG  +  AVT +G +Y +
Sbjct: 138 EGEVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGI-RIKMVAAGAEHTAAVTEDGDLYGW 196

Query: 294 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 353
           G G    LG G+++D L P  + +    G  +  V+ G  H +++  SG +YT+G    G
Sbjct: 197 GWGRYGNLGLGDRNDRLVPERVTS--AGGEKMSMVACGWRHTISVSYSGALYTYGWSKYG 254

Query: 354 ALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRG 413
            LGHGD  D  +P  L +L +    Q+    R T  L   G +YG+GW  FG +G  +  
Sbjct: 255 QLGHGDLEDHLIPHKLEALSNSFISQISGGWRHTMALTSDGKLYGWGWNKFGQVGVGNNL 314

Query: 414 VSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 463
                ++ R  D  +   V Q+S G  HT+ VT+R  +F +G     QLG
Sbjct: 315 DQCSPVQVRFPDDQK---VVQVSCGWRHTLAVTERNNVFAWGRGTNGQLG 361



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 81/257 (31%), Positives = 131/257 (50%), Gaps = 7/257 (2%)

Query: 221 VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 280
           ++AG + +  L     V + G    GQLGHGD  DRP+P  ++ L+    +V +  G  +
Sbjct: 20  ISAGASHSVALLSGDIVCSWGRGEDGQLGHGDAEDRPSPTQLSALDGH-QIVSVTCGADH 78

Query: 281 MLAVTGNGV-VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 339
            +A + +G+ VYS+G G    LGHG   D   P  I+     GI + +++ GD H +A+ 
Sbjct: 79  TVAYSQSGMEVYSWGWGDFGRLGHGNSSDLFTPLPIKALH--GIRIKQIACGDSHCLAVT 136

Query: 340 SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGF 399
             G V +WG+   G LG GD  D  +P+ + + +      V A    T  + + G +YG+
Sbjct: 137 MEGEVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGIRIKMVAAGAEHTAAVTEDGDLYGW 196

Query: 400 GWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNER 459
           GW  +G+LG  DR   +  L P  + S     +S ++ G  HT+ V+  G L+ +G ++ 
Sbjct: 197 GWGRYGNLGLGDR---NDRLVPERVTSAGGEKMSMVACGWRHTISVSYSGALYTYGWSKY 253

Query: 460 AQLGHDTLRGCLEPTEI 476
            QLGH  L   L P ++
Sbjct: 254 GQLGHGDLEDHLIPHKL 270



 Score = 92.4 bits (228), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 74/259 (28%), Positives = 116/259 (44%), Gaps = 6/259 (2%)

Query: 115 QITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
           QI  G  H L ++    V S G +  G LG G +T   +   +I       +  V+A   
Sbjct: 124 QIACGDSHCLAVTMEGEVQSWGRNQNGQLGLG-DTEDSLVPQKIQAFEGIRIKMVAAGAE 182

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
           H A V + G ++  G       G  D N  +  P  V +  G     V  G   T  ++ 
Sbjct: 183 HTAAVTEDGDLYGWGWGRYGNLGLGDRNDRLV-PERVTSAGGEKMSMVACGWRHTISVSY 241

Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
            G ++T G + +GQLGHGD  D   P  +  L     + QI+ G  + +A+T +G +Y +
Sbjct: 242 SGALYTYGWSKYGQLGHGDLEDHLIPHKLEALSN-SFISQISGGWRHTMALTSDGKLYGW 300

Query: 294 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 353
           G      +G G   D+  P  +Q        VV+VS G  H +A+     V+ WG+G  G
Sbjct: 301 GWNKFGQVGVGNNLDQCSP--VQVRFPDDQKVVQVSCGWRHTLAVTERNNVFAWGRGTNG 358

Query: 354 ALGHGDEIDKTLPEPLSSL 372
            LG G+ +D+  P+ + +L
Sbjct: 359 QLGIGESVDRNFPKIIEAL 377



 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 56/153 (36%), Positives = 74/153 (48%), Gaps = 4/153 (2%)

Query: 325 VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARK 384
           V+ +SAG  H VAL S   V +WG+G  G LGHGD  D+  P  LS+L  H  V V    
Sbjct: 17  VLIISAGASHSVALLSGDIVCSWGRGEDGQLGHGDAEDRPSPTQLSALDGHQIVSVTCGA 76

Query: 385 RKTFVLVDTG-SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV 443
             T     +G  VY +GW  FG LG    G S  +  P  + +L    + QI+ G  H +
Sbjct: 77  DHTVAYSQSGMEVYSWGWGDFGRLG---HGNSSDLFTPLPIKALHGIRIKQIACGDSHCL 133

Query: 444 VVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 476
            VT  G +  +G N+  QLG       L P +I
Sbjct: 134 AVTMEGEVQSWGRNQNGQLGLGDTEDSLVPQKI 166



 Score = 72.8 bits (177), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 59/208 (28%), Positives = 93/208 (44%), Gaps = 4/208 (1%)

Query: 116 ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           +  G  HT  ++ +  ++  G    G LG G    + V   R+       +  V+    H
Sbjct: 177 VAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRNDRLVP-ERVTSAGGEKMSMVACGWRH 235

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 234
              V  SG ++T G +     GH D    +  P  +EAL      Q++ G   T  LT  
Sbjct: 236 TISVSYSGALYTYGWSKYGQLGHGDLEDHLI-PHKLEALSNSFISQISGGWRHTMALTSD 294

Query: 235 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 294
           G ++  G N  GQ+G G+ LD+ +P  +    +   VVQ++ G  + LAVT    V+++G
Sbjct: 295 GKLYGWGWNKFGQVGVGNNLDQCSPVQVR-FPDDQKVVQVSCGWRHTLAVTERNNVFAWG 353

Query: 295 SGSNFCLGHGEQHDELQPRAIQTFRRKG 322
            G+N  LG GE  D   P+ I+     G
Sbjct: 354 RGTNGQLGIGESVDRNFPKIIEALSVDG 381



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 51/172 (29%), Positives = 82/172 (47%), Gaps = 12/172 (6%)

Query: 109 TSAGNMQITT---GRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAH 164
           TSAG  +++    G  HT+ +S S ++++ G S  G LGHG      +   ++   S + 
Sbjct: 219 TSAGGEKMSMVACGWRHTISVSYSGALYTYGWSKYGQLGHGDLEDHLIPH-KLEALSNSF 277

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCG---HRDTNRPIFRPRLVEALKGVPCKQV 221
           + Q+S    H   +   G+++  G N     G   + D   P+ + R  +  K V   QV
Sbjct: 278 ISQISGGWRHTMALTSDGKLYGWGWNKFGQVGVGNNLDQCSPV-QVRFPDDQKVV---QV 333

Query: 222 TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
           + G   T  +T R +V   G  T+GQLG G+++DR  PK I  L   G+  Q
Sbjct: 334 SCGWRHTLAVTERNNVFAWGRGTNGQLGIGESVDRNFPKIIEALSVDGASGQ 385


>gi|379318635|pdb|4DNW|A Chain A, Crystal Structure Of Uvb-Resistance Protein Uvr8
 gi|379318636|pdb|4DNW|B Chain B, Crystal Structure Of Uvb-Resistance Protein Uvr8
          Length = 374

 Score =  157 bits (398), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 112/350 (32%), Positives = 174/350 (49%), Gaps = 10/350 (2%)

Query: 116 ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           I+ G  H++ L+S   V S G    G LGHG +     S T+++      +V V+   +H
Sbjct: 9   ISAGASHSVALLSGDIVCSWGRGEDGQLGHG-DAEDRPSPTQLSALDGHQIVSVTCGADH 67

Query: 175 AAFVLQSG-QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
                QSG +V++ G       GH +++  +F P  ++AL G+  KQ+  G +    +T+
Sbjct: 68  TVAYSQSGMEVYSWGWGDFGRLGHGNSS-DLFTPLPIKALHGIRIKQIACGDSHCLAVTM 126

Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
            G V + G N +GQLG GDT D   P+ I   E +  +  +AAG  +  AVT +G +Y +
Sbjct: 127 EGEVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGI-RIKMVAAGAEHTAAVTEDGDLYGW 185

Query: 294 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 353
           G G    LG G++ D L P  + +    G  +  V+ G  H +++  SG +YT+G    G
Sbjct: 186 GWGRYGNLGLGDRTDRLVPERVTS--TGGEKMSMVACGWRHTISVSYSGALYTYGWSKYG 243

Query: 354 ALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRG 413
            LGHGD  D  +P  L +L +    Q+    R T  L   G +YG+GW  FG +G  +  
Sbjct: 244 QLGHGDLEDHLIPHKLEALSNSFISQISGGWRHTMALTSDGKLYGWGWNKFGQVGVGNNL 303

Query: 414 VSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 463
                ++ R  D  +   V Q+S G  HT+ VT+R  +F +G     QLG
Sbjct: 304 DQCSPVQVRFPDDQK---VVQVSCGWRHTLAVTERNNVFAWGRGTNGQLG 350



 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 78/241 (32%), Positives = 127/241 (52%), Gaps = 7/241 (2%)

Query: 237 VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV-VYSFGS 295
           V + G    GQLGHGD  DRP+P  ++ L+    +V +  G  + +A + +G+ VYS+G 
Sbjct: 25  VCSWGRGEDGQLGHGDAEDRPSPTQLSALDGH-QIVSVTCGADHTVAYSQSGMEVYSWGW 83

Query: 296 GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGAL 355
           G    LGHG   D   P  I+     GI + +++ GD H +A+   G V +WG+   G L
Sbjct: 84  GDFGRLGHGNSSDLFTPLPIKALH--GIRIKQIACGDSHCLAVTMEGEVQSWGRNQNGQL 141

Query: 356 GHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVS 415
           G GD  D  +P+ + + +      V A    T  + + G +YG+GW  +G+LG  DR  +
Sbjct: 142 GLGDTEDSLVPQKIQAFEGIRIKMVAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDR--T 199

Query: 416 DKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTE 475
           D+++ P  + S     +S ++ G  HT+ V+  G L+ +G ++  QLGH  L   L P +
Sbjct: 200 DRLV-PERVTSTGGEKMSMVACGWRHTISVSYSGALYTYGWSKYGQLGHGDLEDHLIPHK 258

Query: 476 I 476
           +
Sbjct: 259 L 259



 Score = 91.7 bits (226), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 75/260 (28%), Positives = 118/260 (45%), Gaps = 8/260 (3%)

Query: 115 QITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
           QI  G  H L ++    V S G +  G LG G +T   +   +I       +  V+A   
Sbjct: 113 QIACGDSHCLAVTMEGEVQSWGRNQNGQLGLG-DTEDSLVPQKIQAFEGIRIKMVAAGAE 171

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRD-TNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
           H A V + G ++  G       G  D T+R +  P  V +  G     V  G   T  ++
Sbjct: 172 HTAAVTEDGDLYGWGWGRYGNLGLGDRTDRLV--PERVTSTGGEKMSMVACGWRHTISVS 229

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
             G ++T G + +GQLGHGD  D   P  +  L     + QI+ G  + +A+T +G +Y 
Sbjct: 230 YSGALYTYGWSKYGQLGHGDLEDHLIPHKLEALSNS-FISQISGGWRHTMALTSDGKLYG 288

Query: 293 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 352
           +G      +G G   D+  P  +Q        VV+VS G  H +A+     V+ WG+G  
Sbjct: 289 WGWNKFGQVGVGNNLDQCSP--VQVRFPDDQKVVQVSCGWRHTLAVTERNNVFAWGRGTN 346

Query: 353 GALGHGDEIDKTLPEPLSSL 372
           G LG G+ +D+  P+ + +L
Sbjct: 347 GQLGIGESVDRNFPKIIEAL 366



 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 56/153 (36%), Positives = 74/153 (48%), Gaps = 4/153 (2%)

Query: 325 VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARK 384
           V+ +SAG  H VAL S   V +WG+G  G LGHGD  D+  P  LS+L  H  V V    
Sbjct: 6   VLIISAGASHSVALLSGDIVCSWGRGEDGQLGHGDAEDRPSPTQLSALDGHQIVSVTCGA 65

Query: 385 RKTFVLVDTG-SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV 443
             T     +G  VY +GW  FG LG    G S  +  P  + +L    + QI+ G  H +
Sbjct: 66  DHTVAYSQSGMEVYSWGWGDFGRLG---HGNSSDLFTPLPIKALHGIRIKQIACGDSHCL 122

Query: 444 VVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 476
            VT  G +  +G N+  QLG       L P +I
Sbjct: 123 AVTMEGEVQSWGRNQNGQLGLGDTEDSLVPQKI 155



 Score = 74.7 bits (182), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 61/209 (29%), Positives = 96/209 (45%), Gaps = 6/209 (2%)

Query: 116 ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           +  G  HT  ++ +  ++  G    G LG G  T + V   R+       +  V+    H
Sbjct: 166 VAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRTDRLVP-ERVTSTGGEKMSMVACGWRH 224

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 234
              V  SG ++T G +     GH D    +  P  +EAL      Q++ G   T  LT  
Sbjct: 225 TISVSYSGALYTYGWSKYGQLGHGDLEDHLI-PHKLEALSNSFISQISGGWRHTMALTSD 283

Query: 235 GHVHTCGSNTHGQLGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
           G ++  G N  GQ+G G+ LD+ +P  +  P ++   VVQ++ G  + LAVT    V+++
Sbjct: 284 GKLYGWGWNKFGQVGVGNNLDQCSPVQVRFPDDQ--KVVQVSCGWRHTLAVTERNNVFAW 341

Query: 294 GSGSNFCLGHGEQHDELQPRAIQTFRRKG 322
           G G+N  LG GE  D   P+ I+     G
Sbjct: 342 GRGTNGQLGIGESVDRNFPKIIEALSVDG 370



 Score = 50.1 bits (118), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 47/162 (29%), Positives = 76/162 (46%), Gaps = 9/162 (5%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           +  G  HT+ +S S ++++ G S  G LGHG      +   ++   S + + Q+S    H
Sbjct: 218 VACGWRHTISVSYSGALYTYGWSKYGQLGHGDLEDHLIPH-KLEALSNSFISQISGGWRH 276

Query: 175 AAFVLQSGQVFTCGDNSSFCCG---HRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
              +   G+++  G N     G   + D   P+ + R  +  K V   QV+ G   T  +
Sbjct: 277 TMALTSDGKLYGWGWNKFGQVGVGNNLDQCSPV-QVRFPDDQKVV---QVSCGWRHTLAV 332

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
           T R +V   G  T+GQLG G+++DR  PK I  L   G+  Q
Sbjct: 333 TERNNVFAWGRGTNGQLGIGESVDRNFPKIIEALSVDGASGQ 374


>gi|383280368|pdb|4D9S|A Chain A, Crystal Structure Of Arabidopsis Thaliana Uvr8 (Uv
           Resistance Locus 8)
 gi|383280369|pdb|4D9S|B Chain B, Crystal Structure Of Arabidopsis Thaliana Uvr8 (Uv
           Resistance Locus 8)
          Length = 406

 Score =  157 bits (398), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 112/350 (32%), Positives = 174/350 (49%), Gaps = 10/350 (2%)

Query: 116 ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           I+ G  H++ L+S   V S G    G LGHG +     S T+++      +V V+   +H
Sbjct: 21  ISAGASHSVALLSGDIVCSWGRGEDGQLGHG-DAEDRPSPTQLSALDGHQIVSVTCGADH 79

Query: 175 AAFVLQSG-QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
                QSG +V++ G       GH +++  +F P  ++AL G+  KQ+  G +    +T+
Sbjct: 80  TVAYSQSGMEVYSWGWGDFGRLGHGNSSD-LFTPLPIKALHGIRIKQIACGDSHCLAVTM 138

Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
            G V + G N +GQLG GDT D   P+ I   E +  +  +AAG  +  AVT +G +Y +
Sbjct: 139 EGEVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGI-RIKMVAAGAEHTAAVTEDGDLYGW 197

Query: 294 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 353
           G G    LG G++ D L P  + +    G  +  V+ G  H +++  SG +YT+G    G
Sbjct: 198 GWGRYGNLGLGDRTDRLVPERVTS--TGGEKMSMVACGWRHTISVSYSGALYTYGWSKYG 255

Query: 354 ALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRG 413
            LGHGD  D  +P  L +L +    Q+    R T  L   G +YG+GW  FG +G  +  
Sbjct: 256 QLGHGDLEDHLIPHKLEALSNSFISQISGGWRHTMALTSDGKLYGWGWNKFGQVGVGNNL 315

Query: 414 VSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 463
                ++ R  D  +   V Q+S G  HT+ VT+R  +F +G     QLG
Sbjct: 316 DQCSPVQVRFPDDQK---VVQVSCGWRHTLAVTERNNVFAWGRGTNGQLG 362



 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 81/257 (31%), Positives = 134/257 (52%), Gaps = 7/257 (2%)

Query: 221 VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 280
           ++AG + +  L     V + G    GQLGHGD  DRP+P  ++ L+    +V +  G  +
Sbjct: 21  ISAGASHSVALLSGDIVCSWGRGEDGQLGHGDAEDRPSPTQLSALDGH-QIVSVTCGADH 79

Query: 281 MLAVTGNGV-VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 339
            +A + +G+ VYS+G G    LGHG   D   P  I+     GI + +++ GD H +A+ 
Sbjct: 80  TVAYSQSGMEVYSWGWGDFGRLGHGNSSDLFTPLPIKALH--GIRIKQIACGDSHCLAVT 137

Query: 340 SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGF 399
             G V +WG+   G LG GD  D  +P+ + + +      V A    T  + + G +YG+
Sbjct: 138 MEGEVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGIRIKMVAAGAEHTAAVTEDGDLYGW 197

Query: 400 GWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNER 459
           GW  +G+LG  DR  +D+++  R+  S     +S ++ G  HT+ V+  G L+ +G ++ 
Sbjct: 198 GWGRYGNLGLGDR--TDRLVPERVT-STGGEKMSMVACGWRHTISVSYSGALYTYGWSKY 254

Query: 460 AQLGHDTLRGCLEPTEI 476
            QLGH  L   L P ++
Sbjct: 255 GQLGHGDLEDHLIPHKL 271



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 75/260 (28%), Positives = 118/260 (45%), Gaps = 8/260 (3%)

Query: 115 QITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
           QI  G  H L ++    V S G +  G LG G +T   +   +I       +  V+A   
Sbjct: 125 QIACGDSHCLAVTMEGEVQSWGRNQNGQLGLG-DTEDSLVPQKIQAFEGIRIKMVAAGAE 183

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRD-TNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
           H A V + G ++  G       G  D T+R +  P  V +  G     V  G   T  ++
Sbjct: 184 HTAAVTEDGDLYGWGWGRYGNLGLGDRTDRLV--PERVTSTGGEKMSMVACGWRHTISVS 241

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
             G ++T G + +GQLGHGD  D   P  +  L     + QI+ G  + +A+T +G +Y 
Sbjct: 242 YSGALYTYGWSKYGQLGHGDLEDHLIPHKLEALSN-SFISQISGGWRHTMALTSDGKLYG 300

Query: 293 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 352
           +G      +G G   D+  P  +Q        VV+VS G  H +A+     V+ WG+G  
Sbjct: 301 WGWNKFGQVGVGNNLDQCSP--VQVRFPDDQKVVQVSCGWRHTLAVTERNNVFAWGRGTN 358

Query: 353 GALGHGDEIDKTLPEPLSSL 372
           G LG G+ +D+  P+ + +L
Sbjct: 359 GQLGIGESVDRNFPKIIEAL 378



 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 56/153 (36%), Positives = 74/153 (48%), Gaps = 4/153 (2%)

Query: 325 VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARK 384
           V+ +SAG  H VAL S   V +WG+G  G LGHGD  D+  P  LS+L  H  V V    
Sbjct: 18  VLIISAGASHSVALLSGDIVCSWGRGEDGQLGHGDAEDRPSPTQLSALDGHQIVSVTCGA 77

Query: 385 RKTFVLVDTG-SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV 443
             T     +G  VY +GW  FG LG    G S  +  P  + +L    + QI+ G  H +
Sbjct: 78  DHTVAYSQSGMEVYSWGWGDFGRLG---HGNSSDLFTPLPIKALHGIRIKQIACGDSHCL 134

Query: 444 VVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 476
            VT  G +  +G N+  QLG       L P +I
Sbjct: 135 AVTMEGEVQSWGRNQNGQLGLGDTEDSLVPQKI 167



 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 61/209 (29%), Positives = 96/209 (45%), Gaps = 6/209 (2%)

Query: 116 ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           +  G  HT  ++ +  ++  G    G LG G  T + V   R+       +  V+    H
Sbjct: 178 VAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRTDRLVP-ERVTSTGGEKMSMVACGWRH 236

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 234
              V  SG ++T G +     GH D    +  P  +EAL      Q++ G   T  LT  
Sbjct: 237 TISVSYSGALYTYGWSKYGQLGHGDLEDHLI-PHKLEALSNSFISQISGGWRHTMALTSD 295

Query: 235 GHVHTCGSNTHGQLGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
           G ++  G N  GQ+G G+ LD+ +P  +  P ++   VVQ++ G  + LAVT    V+++
Sbjct: 296 GKLYGWGWNKFGQVGVGNNLDQCSPVQVRFPDDQ--KVVQVSCGWRHTLAVTERNNVFAW 353

Query: 294 GSGSNFCLGHGEQHDELQPRAIQTFRRKG 322
           G G+N  LG GE  D   P+ I+     G
Sbjct: 354 GRGTNGQLGIGESVDRNFPKIIEALSVDG 382



 Score = 50.1 bits (118), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 47/162 (29%), Positives = 76/162 (46%), Gaps = 9/162 (5%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           +  G  HT+ +S S ++++ G S  G LGHG      +   ++   S + + Q+S    H
Sbjct: 230 VACGWRHTISVSYSGALYTYGWSKYGQLGHGDLEDHLIPH-KLEALSNSFISQISGGWRH 288

Query: 175 AAFVLQSGQVFTCGDNSSFCCG---HRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
              +   G+++  G N     G   + D   P+ + R  +  K V   QV+ G   T  +
Sbjct: 289 TMALTSDGKLYGWGWNKFGQVGVGNNLDQCSPV-QVRFPDDQKVV---QVSCGWRHTLAV 344

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
           T R +V   G  T+GQLG G+++DR  PK I  L   G+  Q
Sbjct: 345 TERNNVFAWGRGTNGQLGIGESVDRNFPKIIEALSVDGASGQ 386


>gi|326518338|dbj|BAJ88198.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|326519062|dbj|BAJ96530.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 441

 Score =  157 bits (397), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 106/350 (30%), Positives = 173/350 (49%), Gaps = 8/350 (2%)

Query: 116 ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           ++ G  H++ L++ + + + G    G LGHG    + V      F +      +  +++ 
Sbjct: 19  VSAGASHSVALLAGNVLCTWGRGEDGQLGHGDAEDRLVPTVISGFDAPGITSVICGADHT 78

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 234
            A+     QV++ G       GH ++   +F P+ V+AL+G+  KQ+  G +    +T+ 
Sbjct: 79  TAYSEDEHQVYSWGWGDFGRLGHGNSTD-VFTPQPVKALQGIKIKQLACGDSHCLAVTMA 137

Query: 235 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 294
           G V + G N +GQLG G T D   P++I   E + SV  IAAG  +  AVT +G +Y +G
Sbjct: 138 GEVLSWGRNQNGQLGLGTTEDSLLPQTIQAFEGI-SVKMIAAGAEHTAAVTEDGDIYGWG 196

Query: 295 SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGA 354
            G    LG G+++D   P  + +   +G  +V V+ G  H + + SSG +YT+G    G 
Sbjct: 197 WGRYGNLGLGDRNDRFVPEKVSSV--EGDKMVLVACGWRHTITVSSSGSLYTYGWSKYGQ 254

Query: 355 LGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGV 414
           LGHGD  D  +P  + +LK     Q+    R T  L   G +YG+GW  FG +G  D   
Sbjct: 255 LGHGDFEDHLVPHKVEALKDSSTSQISGGWRHTMALTSDGKLYGWGWNKFGQVGAGDNA- 313

Query: 415 SDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 464
                 P  ++      V+Q++ G  HT+  T++  +F +G     QLGH
Sbjct: 314 --DHCSPAQVNFPEEQKVAQVACGWRHTLAFTEKKNVFAWGRGTSGQLGH 361



 Score =  154 bits (390), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 106/320 (33%), Positives = 160/320 (50%), Gaps = 8/320 (2%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           VV VSA  +H+  +L    + T G       GH D    +  P ++          V  G
Sbjct: 16  VVLVSAGASHSVALLAGNVLCTWGRGEDGQLGHGDAEDRLV-PTVISGFDAPGITSVICG 74

Query: 225 LNFTGFLTIRGH-VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
            + T   +   H V++ G    G+LGHG++ D  TP+ +  L+ +  + Q+A G S+ LA
Sbjct: 75  ADHTTAYSEDEHQVYSWGWGDFGRLGHGNSTDVFTPQPVKALQGI-KIKQLACGDSHCLA 133

Query: 284 VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 343
           VT  G V S+G   N  LG G   D L P+ IQ F  +GI V  ++AG EH  A+   G 
Sbjct: 134 VTMAGEVLSWGRNQNGQLGLGTTEDSLLPQTIQAF--EGISVKMIAAGAEHTAAVTEDGD 191

Query: 344 VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 403
           +Y WG G  G LG GD  D+ +PE +SS++    V V    R T  +  +GS+Y +GW  
Sbjct: 192 IYGWGWGRYGNLGLGDRNDRFVPEKVSSVEGDKMVLVACGWRHTITVSSSGSLYTYGWSK 251

Query: 404 FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 463
           +G LG  D    +  L P  +++L+    SQIS G  HT+ +T  G+L+G+G N+  Q+G
Sbjct: 252 YGQLGHGDF---EDHLVPHKVEALKDSSTSQISGGWRHTMALTSDGKLYGWGWNKFGQVG 308

Query: 464 HDTLRGCLEPTEIFIQEMEE 483
                    P ++   E ++
Sbjct: 309 AGDNADHCSPAQVNFPEEQK 328



 Score =  112 bits (281), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 86/320 (26%), Positives = 146/320 (45%), Gaps = 10/320 (3%)

Query: 110 SAGNMQITTGRYHTLLISNSS--VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ 167
           + G   +  G  HT   S     V+S G    G LGHG  +T   +   +       + Q
Sbjct: 65  APGITSVICGADHTTAYSEDEHQVYSWGWGDFGRLGHG-NSTDVFTPQPVKALQGIKIKQ 123

Query: 168 VSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF 227
           ++  ++H   V  +G+V + G N +   G   T   +  P+ ++A +G+  K + AG   
Sbjct: 124 LACGDSHCLAVTMAGEVLSWGRNQNGQLGLGTTEDSLL-PQTIQAFEGISVKMIAAGAEH 182

Query: 228 TGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN 287
           T  +T  G ++  G   +G LG GD  DR  P+ ++ +E    +V +A G  + + V+ +
Sbjct: 183 TAAVTEDGDIYGWGWGRYGNLGLGDRNDRFVPEKVSSVEG-DKMVLVACGWRHTITVSSS 241

Query: 288 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 347
           G +Y++G      LGHG+  D L P  ++  +       ++S G  H +AL S G +Y W
Sbjct: 242 GSLYTYGWSKYGQLGHGDFEDHLVPHKVEALKDS--STSQISGGWRHTMALTSDGKLYGW 299

Query: 348 GKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSL 407
           G    G +G GD  D   P  ++  +     QV    R T    +  +V+ +G    G L
Sbjct: 300 GWNKFGQVGAGDNADHCSPAQVNFPEEQKVAQVACGWRHTLAFTEKKNVFAWGRGTSGQL 359

Query: 408 GFPDRGVSDKVLRPRILDSL 427
           G  +  + D+   P I+D+L
Sbjct: 360 GHGE--IVDRNT-PVIIDAL 376



 Score = 92.0 bits (227), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 63/258 (24%), Positives = 111/258 (43%), Gaps = 54/258 (20%)

Query: 270 SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRR--------- 320
           +VV ++AG S+ +A+    V+ ++G G +  LGHG+  D L P  I  F           
Sbjct: 15  AVVLVSAGASHSVALLAGNVLCTWGRGEDGQLGHGDAEDRLVPTVISGFDAPGITSVICG 74

Query: 321 ------------------------------------------KGIHVVRVSAGDEHVVAL 338
                                                     +GI + +++ GD H +A+
Sbjct: 75  ADHTTAYSEDEHQVYSWGWGDFGRLGHGNSTDVFTPQPVKALQGIKIKQLACGDSHCLAV 134

Query: 339 DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYG 398
             +G V +WG+   G LG G   D  LP+ + + +      + A    T  + + G +YG
Sbjct: 135 TMAGEVLSWGRNQNGQLGLGTTEDSLLPQTIQAFEGISVKMIAAGAEHTAAVTEDGDIYG 194

Query: 399 FGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNE 458
           +GW  +G+LG  DR  +D+ + P  + S+    +  ++ G  HT+ V+  G L+ +G ++
Sbjct: 195 WGWGRYGNLGLGDR--NDRFV-PEKVSSVEGDKMVLVACGWRHTITVSSSGSLYTYGWSK 251

Query: 459 RAQLGHDTLRGCLEPTEI 476
             QLGH      L P ++
Sbjct: 252 YGQLGHGDFEDHLVPHKV 269



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 63/208 (30%), Positives = 92/208 (44%), Gaps = 4/208 (1%)

Query: 116 ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           I  G  HT  ++ +  ++  G    G LG G    + V   +++      +V V+    H
Sbjct: 176 IAAGAEHTAAVTEDGDIYGWGWGRYGNLGLGDRNDRFVP-EKVSSVEGDKMVLVACGWRH 234

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 234
              V  SG ++T G +     GH D    +  P  VEALK     Q++ G   T  LT  
Sbjct: 235 TITVSSSGSLYTYGWSKYGQLGHGDFEDHLV-PHKVEALKDSSTSQISGGWRHTMALTSD 293

Query: 235 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 294
           G ++  G N  GQ+G GD  D  +P  +   EE   V Q+A G  + LA T    V+++G
Sbjct: 294 GKLYGWGWNKFGQVGAGDNADHCSPAQVNFPEEQ-KVAQVACGWRHTLAFTEKKNVFAWG 352

Query: 295 SGSNFCLGHGEQHDELQPRAIQTFRRKG 322
            G++  LGHGE  D   P  I      G
Sbjct: 353 RGTSGQLGHGEIVDRNTPVIIDALSPDG 380


>gi|224093583|ref|XP_002309939.1| predicted protein [Populus trichocarpa]
 gi|222852842|gb|EEE90389.1| predicted protein [Populus trichocarpa]
          Length = 444

 Score =  157 bits (397), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 104/302 (34%), Positives = 156/302 (51%), Gaps = 10/302 (3%)

Query: 164 HVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDT-NRPIFRPRLVEALKGVPCKQVT 222
            V+ +SA  +H+  +L    V + G       GH D  +RP   P  +  L G+    +T
Sbjct: 19  QVILISAGASHSVALLSGNIVCSWGRGEDGQLGHGDAEDRPT--PTQLSTLDGLDIISIT 76

Query: 223 AGLNFT-GFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 281
            G + T  +   R  V++ G    G+LGHG++ D  TP+ I  L  +  + QIA G S+ 
Sbjct: 77  CGADHTTSYSESRMEVYSWGWGDFGRLGHGNSSDLFTPQPIKALHSL-KIRQIACGDSHC 135

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 341
           LAVT +G V S+G   N  LG G   D L P+ IQ F  +G+ +  V+AG EH  A+   
Sbjct: 136 LAVTMDGEVQSWGRNQNGQLGLGTTEDSLVPQKIQAF--QGVSIKMVAAGAEHTAAVTED 193

Query: 342 GYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGW 401
           G +Y WG G  G LG GD  D+ +PE +S +     + V    R T  +  +G +Y +GW
Sbjct: 194 GELYGWGWGRYGNLGLGDRNDRLVPEKVSLVNGDKMIMVACGWRHTISVSSSGGLYTYGW 253

Query: 402 MGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQ 461
             +G LG  D    +  L P  +++LR  ++S IS G  HT+ +T  G L+G+G N+  Q
Sbjct: 254 SKYGQLGHGDF---EDHLTPHKVEALRDSYISMISGGWRHTMALTSDGNLYGWGWNKFGQ 310

Query: 462 LG 463
           +G
Sbjct: 311 VG 312



 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 107/356 (30%), Positives = 177/356 (49%), Gaps = 18/356 (5%)

Query: 116 ITTGRYHTL-LISNSSVFSCGSSLCGVLGHG-----PETTQCVSFTRINFPSAAHVVQVS 169
           I+ G  H++ L+S + V S G    G LGHG     P  TQ  +   ++      ++ ++
Sbjct: 23  ISAGASHSVALLSGNIVCSWGRGEDGQLGHGDAEDRPTPTQLSTLDGLD------IISIT 76

Query: 170 ASENHAAFVLQSG-QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFT 228
              +H     +S  +V++ G       GH +++  +F P+ ++AL  +  +Q+  G +  
Sbjct: 77  CGADHTTSYSESRMEVYSWGWGDFGRLGHGNSS-DLFTPQPIKALHSLKIRQIACGDSHC 135

Query: 229 GFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG 288
             +T+ G V + G N +GQLG G T D   P+ I   + V S+  +AAG  +  AVT +G
Sbjct: 136 LAVTMDGEVQSWGRNQNGQLGLGTTEDSLVPQKIQAFQGV-SIKMVAAGAEHTAAVTEDG 194

Query: 289 VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 348
            +Y +G G    LG G+++D L P  +      G  ++ V+ G  H +++ SSG +YT+G
Sbjct: 195 ELYGWGWGRYGNLGLGDRNDRLVPEKVSLV--NGDKMIMVACGWRHTISVSSSGGLYTYG 252

Query: 349 KGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLG 408
               G LGHGD  D   P  + +L+      +    R T  L   G++YG+GW  FG +G
Sbjct: 253 WSKYGQLGHGDFEDHLTPHKVEALRDSYISMISGGWRHTMALTSDGNLYGWGWNKFGQVG 312

Query: 409 FPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 464
             D       ++ +     +AH + QIS G  HT+ +T+R  +F +G     QLGH
Sbjct: 313 VGDNIDHCSPVQVKFPHE-QAHSLVQISCGWRHTLAITERQNVFSWGRGTNGQLGH 367



 Score =  119 bits (297), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 77/264 (29%), Positives = 130/264 (49%), Gaps = 10/264 (3%)

Query: 217 PCKQV---TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
           P +QV   +AG + +  L     V + G    GQLGHGD  DRPTP  ++ L+ +  ++ 
Sbjct: 16  PIRQVILISAGASHSVALLSGNIVCSWGRGEDGQLGHGDAEDRPTPTQLSTLDGL-DIIS 74

Query: 274 IAAGPSYMLAVTGNGV-VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGD 332
           I  G  +  + + + + VYS+G G    LGHG   D   P+ I+      + + +++ GD
Sbjct: 75  ITCGADHTTSYSESRMEVYSWGWGDFGRLGHGNSSDLFTPQPIKALHS--LKIRQIACGD 132

Query: 333 EHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVD 392
            H +A+   G V +WG+   G LG G   D  +P+ + + +      V A    T  + +
Sbjct: 133 SHCLAVTMDGEVQSWGRNQNGQLGLGTTEDSLVPQKIQAFQGVSIKMVAAGAEHTAAVTE 192

Query: 393 TGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLF 452
            G +YG+GW  +G+LG  DR   +  L P  +  +    +  ++ G  HT+ V+  G L+
Sbjct: 193 DGELYGWGWGRYGNLGLGDR---NDRLVPEKVSLVNGDKMIMVACGWRHTISVSSSGGLY 249

Query: 453 GFGDNERAQLGHDTLRGCLEPTEI 476
            +G ++  QLGH      L P ++
Sbjct: 250 TYGWSKYGQLGHGDFEDHLTPHKV 273



 Score = 98.2 bits (243), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 73/261 (27%), Positives = 122/261 (46%), Gaps = 4/261 (1%)

Query: 115 QITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
           QI  G  H L ++ +  V S G +  G LG G  T   +   +I       +  V+A   
Sbjct: 127 QIACGDSHCLAVTMDGEVQSWGRNQNGQLGLGT-TEDSLVPQKIQAFQGVSIKMVAAGAE 185

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
           H A V + G+++  G       G  D N  +  P  V  + G     V  G   T  ++ 
Sbjct: 186 HTAAVTEDGELYGWGWGRYGNLGLGDRNDRLV-PEKVSLVNGDKMIMVACGWRHTISVSS 244

Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
            G ++T G + +GQLGHGD  D  TP  +  L +   +  I+ G  + +A+T +G +Y +
Sbjct: 245 SGGLYTYGWSKYGQLGHGDFEDHLTPHKVEALRD-SYISMISGGWRHTMALTSDGNLYGW 303

Query: 294 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 353
           G      +G G+  D   P  ++    +   +V++S G  H +A+     V++WG+G  G
Sbjct: 304 GWNKFGQVGVGDNIDHCSPVQVKFPHEQAHSLVQISCGWRHTLAITERQNVFSWGRGTNG 363

Query: 354 ALGHGDEIDKTLPEPLSSLKS 374
            LGHG+ +D+ LP+ +  L +
Sbjct: 364 QLGHGESMDRNLPKIIEVLSA 384



 Score = 85.9 bits (211), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 62/209 (29%), Positives = 100/209 (47%), Gaps = 4/209 (1%)

Query: 116 ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           +  G  HT  ++ +  ++  G    G LG G    + V   +++  +   ++ V+    H
Sbjct: 180 VAAGAEHTAAVTEDGELYGWGWGRYGNLGLGDRNDRLVP-EKVSLVNGDKMIMVACGWRH 238

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 234
              V  SG ++T G +     GH D    +  P  VEAL+      ++ G   T  LT  
Sbjct: 239 TISVSSSGGLYTYGWSKYGQLGHGDFEDHL-TPHKVEALRDSYISMISGGWRHTMALTSD 297

Query: 235 GHVHTCGSNTHGQLGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
           G+++  G N  GQ+G GD +D  +P  +  P E+  S+VQI+ G  + LA+T    V+S+
Sbjct: 298 GNLYGWGWNKFGQVGVGDNIDHCSPVQVKFPHEQAHSLVQISCGWRHTLAITERQNVFSW 357

Query: 294 GSGSNFCLGHGEQHDELQPRAIQTFRRKG 322
           G G+N  LGHGE  D   P+ I+     G
Sbjct: 358 GRGTNGQLGHGESMDRNLPKIIEVLSADG 386


>gi|242073146|ref|XP_002446509.1| hypothetical protein SORBIDRAFT_06g017130 [Sorghum bicolor]
 gi|241937692|gb|EES10837.1| hypothetical protein SORBIDRAFT_06g017130 [Sorghum bicolor]
          Length = 443

 Score =  157 bits (397), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 107/350 (30%), Positives = 174/350 (49%), Gaps = 8/350 (2%)

Query: 116 ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           ++ G  H++ L++ + + S G    G LGHG    + V      F +      +  +++ 
Sbjct: 19  VSAGASHSVALLTGNVLCSWGRGEDGQLGHGDAEDRLVPTVLSGFDAPGITSVICGADHT 78

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 234
            A+     QV++ G       GH +++  +F P+ V+AL+G+  KQ+  G +    +T+ 
Sbjct: 79  TAYSEDELQVYSWGWGDFGRLGHGNSSD-VFTPQPVKALQGLKIKQIACGDSHCLAVTMA 137

Query: 235 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 294
           G V + G N +GQLG G T D   P+ I   E V  V  IAAG  +  AVT +G +Y +G
Sbjct: 138 GQVQSWGRNQNGQLGLGTTEDSLLPQKIQAFEGV-CVKMIAAGAEHTAAVTEDGDLYGWG 196

Query: 295 SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGA 354
            G    LG G+++D L P  + +   +G  +V V+ G  H + +  SG +YT+G    G 
Sbjct: 197 WGRYGNLGLGDRNDRLLPEKVSSV--EGEKMVLVACGWRHTITVSDSGNLYTYGWSKYGQ 254

Query: 355 LGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGV 414
           LGHGD  D  +P  L +LK     Q+    R T  L   G +YG+GW  FG +G    G 
Sbjct: 255 LGHGDFEDHLVPHKLEALKDSTISQISGGWRHTMALTSEGKLYGWGWNKFGQVGV---GN 311

Query: 415 SDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 464
           +D    P  +       +SQ++ G  HT+ ++++  +F +G     QLG+
Sbjct: 312 NDDHCSPVQVHFPEDQKISQVACGWRHTLALSEKKNVFSWGRGTSGQLGN 361



 Score =  155 bits (391), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 107/325 (32%), Positives = 164/325 (50%), Gaps = 8/325 (2%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           VV VSA  +H+  +L    + + G       GH D    +  P ++          V  G
Sbjct: 16  VVLVSAGASHSVALLTGNVLCSWGRGEDGQLGHGDAEDRLV-PTVLSGFDAPGITSVICG 74

Query: 225 LNFT-GFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
            + T  +      V++ G    G+LGHG++ D  TP+ +  L+ +  + QIA G S+ LA
Sbjct: 75  ADHTTAYSEDELQVYSWGWGDFGRLGHGNSSDVFTPQPVKALQGL-KIKQIACGDSHCLA 133

Query: 284 VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 343
           VT  G V S+G   N  LG G   D L P+ IQ F  +G+ V  ++AG EH  A+   G 
Sbjct: 134 VTMAGQVQSWGRNQNGQLGLGTTEDSLLPQKIQAF--EGVCVKMIAAGAEHTAAVTEDGD 191

Query: 344 VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 403
           +Y WG G  G LG GD  D+ LPE +SS++    V V    R T  + D+G++Y +GW  
Sbjct: 192 LYGWGWGRYGNLGLGDRNDRLLPEKVSSVEGEKMVLVACGWRHTITVSDSGNLYTYGWSK 251

Query: 404 FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 463
           +G LG  D    +  L P  L++L+   +SQIS G  HT+ +T  G+L+G+G N+  Q+G
Sbjct: 252 YGQLGHGDF---EDHLVPHKLEALKDSTISQISGGWRHTMALTSEGKLYGWGWNKFGQVG 308

Query: 464 HDTLRGCLEPTEIFIQEMEEDTGLA 488
                    P ++   E ++ + +A
Sbjct: 309 VGNNDDHCSPVQVHFPEDQKISQVA 333



 Score = 96.7 bits (239), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 65/258 (25%), Positives = 112/258 (43%), Gaps = 54/258 (20%)

Query: 270 SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGI------ 323
           +VV ++AG S+ +A+    V+ S+G G +  LGHG+  D L P  +  F   GI      
Sbjct: 15  TVVLVSAGASHSVALLTGNVLCSWGRGEDGQLGHGDAEDRLVPTVLSGFDAPGITSVICG 74

Query: 324 ---------------------------------------------HVVRVSAGDEHVVAL 338
                                                         + +++ GD H +A+
Sbjct: 75  ADHTTAYSEDELQVYSWGWGDFGRLGHGNSSDVFTPQPVKALQGLKIKQIACGDSHCLAV 134

Query: 339 DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYG 398
             +G V +WG+   G LG G   D  LP+ + + +      + A    T  + + G +YG
Sbjct: 135 TMAGQVQSWGRNQNGQLGLGTTEDSLLPQKIQAFEGVCVKMIAAGAEHTAAVTEDGDLYG 194

Query: 399 FGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNE 458
           +GW  +G+LG  DR  +D++L P  + S+    +  ++ G  HT+ V+D G L+ +G ++
Sbjct: 195 WGWGRYGNLGLGDR--NDRLL-PEKVSSVEGEKMVLVACGWRHTITVSDSGNLYTYGWSK 251

Query: 459 RAQLGHDTLRGCLEPTEI 476
             QLGH      L P ++
Sbjct: 252 YGQLGHGDFEDHLVPHKL 269



 Score = 91.3 bits (225), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 72/261 (27%), Positives = 122/261 (46%), Gaps = 6/261 (2%)

Query: 115 QITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
           QI  G  H L ++ +  V S G +  G LG G  T   +   +I       V  ++A   
Sbjct: 123 QIACGDSHCLAVTMAGQVQSWGRNQNGQLGLG-TTEDSLLPQKIQAFEGVCVKMIAAGAE 181

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
           H A V + G ++  G       G  D N  +  P  V +++G     V  G   T  ++ 
Sbjct: 182 HTAAVTEDGDLYGWGWGRYGNLGLGDRNDRLL-PEKVSSVEGEKMVLVACGWRHTITVSD 240

Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
            G+++T G + +GQLGHGD  D   P  +  L++  ++ QI+ G  + +A+T  G +Y +
Sbjct: 241 SGNLYTYGWSKYGQLGHGDFEDHLVPHKLEALKD-STISQISGGWRHTMALTSEGKLYGW 299

Query: 294 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 353
           G      +G G   D   P  +Q    +   + +V+ G  H +AL     V++WG+G  G
Sbjct: 300 GWNKFGQVGVGNNDDHCSP--VQVHFPEDQKISQVACGWRHTLALSEKKNVFSWGRGTSG 357

Query: 354 ALGHGDEIDKTLPEPLSSLKS 374
            LG+G+ +D+  P  + +L +
Sbjct: 358 QLGNGEIVDRNTPVLIDALST 378



 Score = 66.6 bits (161), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 57/208 (27%), Positives = 92/208 (44%), Gaps = 4/208 (1%)

Query: 116 ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           I  G  HT  ++ +  ++  G    G LG G    + +   +++      +V V+    H
Sbjct: 176 IAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRNDRLLP-EKVSSVEGEKMVLVACGWRH 234

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 234
              V  SG ++T G +     GH D    +  P  +EALK     Q++ G   T  LT  
Sbjct: 235 TITVSDSGNLYTYGWSKYGQLGHGDFEDHLV-PHKLEALKDSTISQISGGWRHTMALTSE 293

Query: 235 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 294
           G ++  G N  GQ+G G+  D  +P  +    E   + Q+A G  + LA++    V+S+G
Sbjct: 294 GKLYGWGWNKFGQVGVGNNDDHCSPVQVH-FPEDQKISQVACGWRHTLALSEKKNVFSWG 352

Query: 295 SGSNFCLGHGEQHDELQPRAIQTFRRKG 322
            G++  LG+GE  D   P  I      G
Sbjct: 353 RGTSGQLGNGEIVDRNTPVLIDALSTDG 380



 Score = 49.7 bits (117), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 44/158 (27%), Positives = 71/158 (44%), Gaps = 7/158 (4%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           +  G  HT+ +S+S ++++ G S  G LGHG      V   ++     + + Q+S    H
Sbjct: 228 VACGWRHTITVSDSGNLYTYGWSKYGQLGHGDFEDHLVPH-KLEALKDSTISQISGGWRH 286

Query: 175 AAFVLQSGQVFTCGDNS--SFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
              +   G+++  G N       G+ D +    +    E  K     QV  G   T  L+
Sbjct: 287 TMALTSEGKLYGWGWNKFGQVGVGNNDDHCSPVQVHFPEDQK---ISQVACGWRHTLALS 343

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS 270
            + +V + G  T GQLG+G+ +DR TP  I  L   GS
Sbjct: 344 EKKNVFSWGRGTSGQLGNGEIVDRNTPVLIDALSTDGS 381


>gi|15237540|ref|NP_201191.1| protein UV-B resistance 8 [Arabidopsis thaliana]
 gi|10177674|dbj|BAB11034.1| UVB-resistance protein UVR8 [Arabidopsis thaliana]
 gi|21928123|gb|AAM78089.1| AT5g63860/MGI19_6 [Arabidopsis thaliana]
 gi|23308399|gb|AAN18169.1| At5g63860/MGI19_6 [Arabidopsis thaliana]
 gi|332010422|gb|AED97805.1| protein UV-B resistance 8 [Arabidopsis thaliana]
          Length = 440

 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 112/350 (32%), Positives = 174/350 (49%), Gaps = 10/350 (2%)

Query: 116 ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           I+ G  H++ L+S   V S G    G LGHG +     S T+++      +V V+   +H
Sbjct: 20  ISAGASHSVALLSGDIVCSWGRGEDGQLGHG-DAEDRPSPTQLSALDGHQIVSVTCGADH 78

Query: 175 AAFVLQSG-QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
                QSG +V++ G       GH +++  +F P  ++AL G+  KQ+  G +    +T+
Sbjct: 79  TVAYSQSGMEVYSWGWGDFGRLGHGNSSD-LFTPLPIKALHGIRIKQIACGDSHCLAVTM 137

Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
            G V + G N +GQLG GDT D   P+ I   E +  +  +AAG  +  AVT +G +Y +
Sbjct: 138 EGEVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGI-RIKMVAAGAEHTAAVTEDGDLYGW 196

Query: 294 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 353
           G G    LG G++ D L P  + +    G  +  V+ G  H +++  SG +YT+G    G
Sbjct: 197 GWGRYGNLGLGDRTDRLVPERVTS--TGGEKMSMVACGWRHTISVSYSGALYTYGWSKYG 254

Query: 354 ALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRG 413
            LGHGD  D  +P  L +L +    Q+    R T  L   G +YG+GW  FG +G  +  
Sbjct: 255 QLGHGDLEDHLIPHKLEALSNSFISQISGGWRHTMALTSDGKLYGWGWNKFGQVGVGNNL 314

Query: 414 VSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 463
                ++ R  D  +   V Q+S G  HT+ VT+R  +F +G     QLG
Sbjct: 315 DQCSPVQVRFPDDQK---VVQVSCGWRHTLAVTERNNVFAWGRGTNGQLG 361



 Score =  127 bits (319), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 81/257 (31%), Positives = 134/257 (52%), Gaps = 7/257 (2%)

Query: 221 VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 280
           ++AG + +  L     V + G    GQLGHGD  DRP+P  ++ L+    +V +  G  +
Sbjct: 20  ISAGASHSVALLSGDIVCSWGRGEDGQLGHGDAEDRPSPTQLSALDGH-QIVSVTCGADH 78

Query: 281 MLAVTGNGV-VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 339
            +A + +G+ VYS+G G    LGHG   D   P  I+     GI + +++ GD H +A+ 
Sbjct: 79  TVAYSQSGMEVYSWGWGDFGRLGHGNSSDLFTPLPIKALH--GIRIKQIACGDSHCLAVT 136

Query: 340 SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGF 399
             G V +WG+   G LG GD  D  +P+ + + +      V A    T  + + G +YG+
Sbjct: 137 MEGEVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGIRIKMVAAGAEHTAAVTEDGDLYGW 196

Query: 400 GWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNER 459
           GW  +G+LG  DR  +D+++  R+  S     +S ++ G  HT+ V+  G L+ +G ++ 
Sbjct: 197 GWGRYGNLGLGDR--TDRLVPERVT-STGGEKMSMVACGWRHTISVSYSGALYTYGWSKY 253

Query: 460 AQLGHDTLRGCLEPTEI 476
            QLGH  L   L P ++
Sbjct: 254 GQLGHGDLEDHLIPHKL 270



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 75/260 (28%), Positives = 118/260 (45%), Gaps = 8/260 (3%)

Query: 115 QITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
           QI  G  H L ++    V S G +  G LG G +T   +   +I       +  V+A   
Sbjct: 124 QIACGDSHCLAVTMEGEVQSWGRNQNGQLGLG-DTEDSLVPQKIQAFEGIRIKMVAAGAE 182

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRD-TNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
           H A V + G ++  G       G  D T+R +  P  V +  G     V  G   T  ++
Sbjct: 183 HTAAVTEDGDLYGWGWGRYGNLGLGDRTDRLV--PERVTSTGGEKMSMVACGWRHTISVS 240

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
             G ++T G + +GQLGHGD  D   P  +  L     + QI+ G  + +A+T +G +Y 
Sbjct: 241 YSGALYTYGWSKYGQLGHGDLEDHLIPHKLEALSN-SFISQISGGWRHTMALTSDGKLYG 299

Query: 293 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 352
           +G      +G G   D+  P  +Q        VV+VS G  H +A+     V+ WG+G  
Sbjct: 300 WGWNKFGQVGVGNNLDQCSP--VQVRFPDDQKVVQVSCGWRHTLAVTERNNVFAWGRGTN 357

Query: 353 GALGHGDEIDKTLPEPLSSL 372
           G LG G+ +D+  P+ + +L
Sbjct: 358 GQLGIGESVDRNFPKIIEAL 377



 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 56/153 (36%), Positives = 74/153 (48%), Gaps = 4/153 (2%)

Query: 325 VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARK 384
           V+ +SAG  H VAL S   V +WG+G  G LGHGD  D+  P  LS+L  H  V V    
Sbjct: 17  VLIISAGASHSVALLSGDIVCSWGRGEDGQLGHGDAEDRPSPTQLSALDGHQIVSVTCGA 76

Query: 385 RKTFVLVDTG-SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV 443
             T     +G  VY +GW  FG LG    G S  +  P  + +L    + QI+ G  H +
Sbjct: 77  DHTVAYSQSGMEVYSWGWGDFGRLG---HGNSSDLFTPLPIKALHGIRIKQIACGDSHCL 133

Query: 444 VVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 476
            VT  G +  +G N+  QLG       L P +I
Sbjct: 134 AVTMEGEVQSWGRNQNGQLGLGDTEDSLVPQKI 166



 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 61/209 (29%), Positives = 96/209 (45%), Gaps = 6/209 (2%)

Query: 116 ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           +  G  HT  ++ +  ++  G    G LG G  T + V   R+       +  V+    H
Sbjct: 177 VAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRTDRLVP-ERVTSTGGEKMSMVACGWRH 235

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 234
              V  SG ++T G +     GH D    +  P  +EAL      Q++ G   T  LT  
Sbjct: 236 TISVSYSGALYTYGWSKYGQLGHGDLEDHLI-PHKLEALSNSFISQISGGWRHTMALTSD 294

Query: 235 GHVHTCGSNTHGQLGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
           G ++  G N  GQ+G G+ LD+ +P  +  P ++   VVQ++ G  + LAVT    V+++
Sbjct: 295 GKLYGWGWNKFGQVGVGNNLDQCSPVQVRFPDDQ--KVVQVSCGWRHTLAVTERNNVFAW 352

Query: 294 GSGSNFCLGHGEQHDELQPRAIQTFRRKG 322
           G G+N  LG GE  D   P+ I+     G
Sbjct: 353 GRGTNGQLGIGESVDRNFPKIIEALSVDG 381



 Score = 49.7 bits (117), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 47/162 (29%), Positives = 76/162 (46%), Gaps = 9/162 (5%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           +  G  HT+ +S S ++++ G S  G LGHG      +   ++   S + + Q+S    H
Sbjct: 229 VACGWRHTISVSYSGALYTYGWSKYGQLGHGDLEDHLIPH-KLEALSNSFISQISGGWRH 287

Query: 175 AAFVLQSGQVFTCGDNSSFCCG---HRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
              +   G+++  G N     G   + D   P+ + R  +  K V   QV+ G   T  +
Sbjct: 288 TMALTSDGKLYGWGWNKFGQVGVGNNLDQCSPV-QVRFPDDQKVV---QVSCGWRHTLAV 343

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
           T R +V   G  T+GQLG G+++DR  PK I  L   G+  Q
Sbjct: 344 TERNNVFAWGRGTNGQLGIGESVDRNFPKIIEALSVDGASGQ 385


>gi|5478530|gb|AAD43920.1|AF130441_1 UVB-resistance protein UVR8 [Arabidopsis thaliana]
          Length = 440

 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 112/350 (32%), Positives = 174/350 (49%), Gaps = 10/350 (2%)

Query: 116 ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           I+ G  H++ L+S   V S G    G LGHG +     S T+++      +V V+   +H
Sbjct: 20  ISAGASHSVALLSGDIVCSWGRGEDGQLGHG-DAEDRPSPTQLSALDGHQIVSVTCGADH 78

Query: 175 AAFVLQSG-QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
                QSG +V++ G       GH +++  +F P  ++AL G+  KQ+  G +    +T+
Sbjct: 79  TVAYSQSGMEVYSWGWGDFGRLGHGNSSD-LFTPLPIKALHGIRIKQIACGDSHCLAVTM 137

Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
            G V + G N +GQLG GDT D   P+ I   E +  +  +AAG  +  AVT +G +Y +
Sbjct: 138 EGEVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGI-PIKMVAAGAEHTAAVTEDGDLYGW 196

Query: 294 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 353
           G G    LG G++ D L P  + +    G  +  V+ G  H +++  SG +YT+G    G
Sbjct: 197 GWGRYGNLGLGDRTDRLVPERVTS--TGGEKMSMVACGWRHTISVSYSGALYTYGWSKYG 254

Query: 354 ALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRG 413
            LGHGD  D  +P  L +L +    Q+    R T  L   G +YG+GW  FG +G  +  
Sbjct: 255 QLGHGDLEDHLIPHKLEALSNSFISQISGGWRHTMALTSDGKLYGWGWNKFGQVGVGNNL 314

Query: 414 VSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 463
                ++ R  D  +   V Q+S G  HT+ VT+R  +F +G     QLG
Sbjct: 315 DQCSPVQVRFPDDQK---VVQVSCGWRHTLAVTERNNVFAWGRGTNGQLG 361



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 81/257 (31%), Positives = 134/257 (52%), Gaps = 7/257 (2%)

Query: 221 VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 280
           ++AG + +  L     V + G    GQLGHGD  DRP+P  ++ L+    +V +  G  +
Sbjct: 20  ISAGASHSVALLSGDIVCSWGRGEDGQLGHGDAEDRPSPTQLSALDGH-QIVSVTCGADH 78

Query: 281 MLAVTGNGV-VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 339
            +A + +G+ VYS+G G    LGHG   D   P  I+     GI + +++ GD H +A+ 
Sbjct: 79  TVAYSQSGMEVYSWGWGDFGRLGHGNSSDLFTPLPIKALH--GIRIKQIACGDSHCLAVT 136

Query: 340 SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGF 399
             G V +WG+   G LG GD  D  +P+ + + +      V A    T  + + G +YG+
Sbjct: 137 MEGEVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGIPIKMVAAGAEHTAAVTEDGDLYGW 196

Query: 400 GWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNER 459
           GW  +G+LG  DR  +D+++  R+  S     +S ++ G  HT+ V+  G L+ +G ++ 
Sbjct: 197 GWGRYGNLGLGDR--TDRLVPERVT-STGGEKMSMVACGWRHTISVSYSGALYTYGWSKY 253

Query: 460 AQLGHDTLRGCLEPTEI 476
            QLGH  L   L P ++
Sbjct: 254 GQLGHGDLEDHLIPHKL 270



 Score = 93.2 bits (230), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 78/311 (25%), Positives = 131/311 (42%), Gaps = 55/311 (17%)

Query: 114 MQITTGRYHTLLISNS--SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSAS 171
           + +T G  HT+  S S   V+S G    G LGHG  ++   +   I       + Q++  
Sbjct: 70  VSVTCGADHTVAYSQSGMEVYSWGWGDFGRLGHG-NSSDLFTPLPIKALHGIRIKQIACG 128

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
           ++H   V   G+V + G N +   G  DT   +  P+ ++A +G+P K V AG   T  +
Sbjct: 129 DSHCLAVTMEGEVQSWGRNQNGQLGLGDTEDSLV-PQKIQAFEGIPIKMVAAGAEHTAAV 187

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
           T  G ++  G   +G LG GD  DR  P+ +        +  +A G  + ++V+ +G +Y
Sbjct: 188 TEDGDLYGWGWGRYGNLGLGDRTDRLVPERVTSTGGE-KMSMVACGWRHTISVSYSGALY 246

Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQT--------------------------------FR 319
           ++G      LGHG+  D L P  ++                                 F 
Sbjct: 247 TYGWSKYGQLGHGDLEDHLIPHKLEALSNSFISQISGGWRHTMALTSDGKLYGWGWNKFG 306

Query: 320 RKGI------------------HVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEI 361
           + G+                   VV+VS G  H +A+     V+ WG+G  G LG G+ +
Sbjct: 307 QVGVGNNLDQCSPVQVRFPDDQKVVQVSCGWRHTLAVTERNNVFAWGRGTNGQLGIGESV 366

Query: 362 DKTLPEPLSSL 372
           D+  P+ + +L
Sbjct: 367 DRNFPKIIEAL 377



 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 56/153 (36%), Positives = 74/153 (48%), Gaps = 4/153 (2%)

Query: 325 VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARK 384
           V+ +SAG  H VAL S   V +WG+G  G LGHGD  D+  P  LS+L  H  V V    
Sbjct: 17  VLIISAGASHSVALLSGDIVCSWGRGEDGQLGHGDAEDRPSPTQLSALDGHQIVSVTCGA 76

Query: 385 RKTFVLVDTG-SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV 443
             T     +G  VY +GW  FG LG    G S  +  P  + +L    + QI+ G  H +
Sbjct: 77  DHTVAYSQSGMEVYSWGWGDFGRLG---HGNSSDLFTPLPIKALHGIRIKQIACGDSHCL 133

Query: 444 VVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 476
            VT  G +  +G N+  QLG       L P +I
Sbjct: 134 AVTMEGEVQSWGRNQNGQLGLGDTEDSLVPQKI 166



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 60/208 (28%), Positives = 94/208 (45%), Gaps = 4/208 (1%)

Query: 116 ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           +  G  HT  ++ +  ++  G    G LG G  T + V   R+       +  V+    H
Sbjct: 177 VAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRTDRLVP-ERVTSTGGEKMSMVACGWRH 235

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 234
              V  SG ++T G +     GH D    +  P  +EAL      Q++ G   T  LT  
Sbjct: 236 TISVSYSGALYTYGWSKYGQLGHGDLEDHLI-PHKLEALSNSFISQISGGWRHTMALTSD 294

Query: 235 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 294
           G ++  G N  GQ+G G+ LD+ +P  +    +   VVQ++ G  + LAVT    V+++G
Sbjct: 295 GKLYGWGWNKFGQVGVGNNLDQCSPVQVR-FPDDQKVVQVSCGWRHTLAVTERNNVFAWG 353

Query: 295 SGSNFCLGHGEQHDELQPRAIQTFRRKG 322
            G+N  LG GE  D   P+ I+     G
Sbjct: 354 RGTNGQLGIGESVDRNFPKIIEALSVDG 381



 Score = 49.3 bits (116), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 47/162 (29%), Positives = 76/162 (46%), Gaps = 9/162 (5%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           +  G  HT+ +S S ++++ G S  G LGHG      +   ++   S + + Q+S    H
Sbjct: 229 VACGWRHTISVSYSGALYTYGWSKYGQLGHGDLEDHLIPH-KLEALSNSFISQISGGWRH 287

Query: 175 AAFVLQSGQVFTCGDNSSFCCG---HRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
              +   G+++  G N     G   + D   P+ + R  +  K V   QV+ G   T  +
Sbjct: 288 TMALTSDGKLYGWGWNKFGQVGVGNNLDQCSPV-QVRFPDDQKVV---QVSCGWRHTLAV 343

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
           T R +V   G  T+GQLG G+++DR  PK I  L   G+  Q
Sbjct: 344 TERNNVFAWGRGTNGQLGIGESVDRNFPKIIEALSVDGASGQ 385


>gi|357464765|ref|XP_003602664.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
 gi|358348400|ref|XP_003638235.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
 gi|355491712|gb|AES72915.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
 gi|355504170|gb|AES85373.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
          Length = 439

 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 118/371 (31%), Positives = 184/371 (49%), Gaps = 15/371 (4%)

Query: 97  LQSVEHSSDIVETSAGNMQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFT 155
           +Q VE ++         + I+ G  H++ LIS + V S G    G LGHG +T   +  T
Sbjct: 1   MQEVEATTASPPPPRRVLLISAGGSHSVALISGNVVCSWGRGEDGQLGHG-DTDDRLLPT 59

Query: 156 RINFPSAAHVVQVSASENHA-AFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALK 214
           +++   A  +V V    +H  A+     +V++ G       GH +++  +F P+ + AL+
Sbjct: 60  QLSALDAQQIVSVVCGADHTLAYSESKVEVYSWGWGDFGRLGHGNSSD-LFIPQPIRALQ 118

Query: 215 GVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQI 274
           G+  KQ+  G +    +T+ G V + G N +GQLG G T D   P+ I   + V  +  +
Sbjct: 119 GLRIKQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGTTEDSLVPQKIQTFQGV-PIKMV 177

Query: 275 AAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEH 334
           AAG  + +A+T NG +Y +G G    LG G+++D   P  +     K   +V V+ G  H
Sbjct: 178 AAGAEHSVAITENGELYGWGWGRYGNLGLGDRNDRCIPEKVSVDCDK---MVLVACGWRH 234

Query: 335 VVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 394
            +++ SSG +YT+G    G LGHGD  D  +P  L +    L  QV    R T  L   G
Sbjct: 235 TISVSSSGELYTYGWSKYGQLGHGDCKDHLVPHKLQAFSDKLICQVSGGWRHTMALTTGG 294

Query: 395 SVYGFGWMGFGSLGFPDRGVSDKVLR--PRILDSLRAHHVSQISTGLYHTVVVTDRGRLF 452
            +YG+GW  FG +     GV D V R  P  +       V+QIS G  HT+ VT++  ++
Sbjct: 295 QLYGWGWNKFGQV-----GVGDNVDRCSPVQVKFPHDQKVAQISCGWRHTIAVTEKDNVY 349

Query: 453 GFGDNERAQLG 463
            +G     QLG
Sbjct: 350 SWGRGTNGQLG 360



 Score =  119 bits (297), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 76/257 (29%), Positives = 132/257 (51%), Gaps = 8/257 (3%)

Query: 221 VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 280
           ++AG + +  L     V + G    GQLGHGDT DR  P  ++ L+    +V +  G  +
Sbjct: 20  ISAGGSHSVALISGNVVCSWGRGEDGQLGHGDTDDRLLPTQLSALD-AQQIVSVVCGADH 78

Query: 281 MLAVTGNGV-VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 339
            LA + + V VYS+G G    LGHG   D   P+ I+    +G+ + +++ GD H +A+ 
Sbjct: 79  TLAYSESKVEVYSWGWGDFGRLGHGNSSDLFIPQPIRAL--QGLRIKQIACGDSHCLAVT 136

Query: 340 SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGF 399
             G V +WG+   G LG G   D  +P+ + + +      V A    +  + + G +YG+
Sbjct: 137 MEGEVQSWGRNQNGQLGLGTTEDSLVPQKIQTFQGVPIKMVAAGAEHSVAITENGELYGW 196

Query: 400 GWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNER 459
           GW  +G+LG  DR  +D+ +  ++  S+    +  ++ G  HT+ V+  G L+ +G ++ 
Sbjct: 197 GWGRYGNLGLGDR--NDRCIPEKV--SVDCDKMVLVACGWRHTISVSSSGELYTYGWSKY 252

Query: 460 AQLGHDTLRGCLEPTEI 476
            QLGH   +  L P ++
Sbjct: 253 GQLGHGDCKDHLVPHKL 269



 Score =  118 bits (295), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 92/323 (28%), Positives = 149/323 (46%), Gaps = 25/323 (7%)

Query: 114 MQITTGRYHTLLISNSSV--FSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAH 164
           + +  G  HTL  S S V  +S G    G LGHG       P+  + +   RI       
Sbjct: 70  VSVVCGADHTLAYSESKVEVYSWGWGDFGRLGHGNSSDLFIPQPIRALQGLRIK------ 123

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
             Q++  ++H   V   G+V + G N +   G   T   +  P+ ++  +GVP K V AG
Sbjct: 124 --QIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGTTEDSLV-PQKIQTFQGVPIKMVAAG 180

Query: 225 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 284
              +  +T  G ++  G   +G LG GD  DR  P+ ++   +   +V +A G  + ++V
Sbjct: 181 AEHSVAITENGELYGWGWGRYGNLGLGDRNDRCIPEKVSV--DCDKMVLVACGWRHTISV 238

Query: 285 TGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           + +G +Y++G      LGHG+  D L P  +Q F  K I   +VS G  H +AL + G +
Sbjct: 239 SSSGELYTYGWSKYGQLGHGDCKDHLVPHKLQAFSDKLI--CQVSGGWRHTMALTTGGQL 296

Query: 345 YTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGF 404
           Y WG    G +G GD +D+  P  +         Q+    R T  + +  +VY +G    
Sbjct: 297 YGWGWNKFGQVGVGDNVDRCSPVQVKFPHDQKVAQISCGWRHTIAVTEKDNVYSWGRGTN 356

Query: 405 GSLGFPDRGVSDKVLRPRILDSL 427
           G LG  D   +     P+I+++L
Sbjct: 357 GQLGIGD---TIDWNYPKIIEAL 376



 Score = 75.1 bits (183), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 61/209 (29%), Positives = 98/209 (46%), Gaps = 7/209 (3%)

Query: 116 ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           +  G  H++ I+ N  ++  G    G LG G    +C+   +++      +V V+    H
Sbjct: 177 VAAGAEHSVAITENGELYGWGWGRYGNLGLGDRNDRCIP-EKVSV-DCDKMVLVACGWRH 234

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 234
              V  SG+++T G +     GH D    +  P  ++A       QV+ G   T  LT  
Sbjct: 235 TISVSSSGELYTYGWSKYGQLGHGDCKDHLV-PHKLQAFSDKLICQVSGGWRHTMALTTG 293

Query: 235 GHVHTCGSNTHGQLGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
           G ++  G N  GQ+G GD +DR +P  +  P ++   V QI+ G  + +AVT    VYS+
Sbjct: 294 GQLYGWGWNKFGQVGVGDNVDRCSPVQVKFPHDQ--KVAQISCGWRHTIAVTEKDNVYSW 351

Query: 294 GSGSNFCLGHGEQHDELQPRAIQTFRRKG 322
           G G+N  LG G+  D   P+ I+     G
Sbjct: 352 GRGTNGQLGIGDTIDWNYPKIIEALSVDG 380



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 50/159 (31%), Positives = 71/159 (44%), Gaps = 3/159 (1%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           +  G  HT+ +S+S  +++ G S  G LGHG      V      F S   + QVS    H
Sbjct: 228 VACGWRHTISVSSSGELYTYGWSKYGQLGHGDCKDHLVPHKLQAF-SDKLICQVSGGWRH 286

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 234
              +   GQ++  G N     G  D N     P  V+        Q++ G   T  +T +
Sbjct: 287 TMALTTGGQLYGWGWNKFGQVGVGD-NVDRCSPVQVKFPHDQKVAQISCGWRHTIAVTEK 345

Query: 235 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
            +V++ G  T+GQLG GDT+D   PK I  L   GS  Q
Sbjct: 346 DNVYSWGRGTNGQLGIGDTIDWNYPKIIEALSVDGSCGQ 384


>gi|356508943|ref|XP_003523212.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2-like [Glycine
           max]
          Length = 441

 Score =  156 bits (395), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 111/321 (34%), Positives = 162/321 (50%), Gaps = 11/321 (3%)

Query: 163 AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTN-RPIFRPRLVEALKGVPCKQV 221
           + V+ +SA  +H   +L    V + G       GH DT+ RP+  P  + AL       +
Sbjct: 14  SRVLLISAGASHTVALLSGNVVCSWGRGEDGQLGHGDTDDRPL--PTQLSALDAQHIDSI 71

Query: 222 TAGLNFT-GFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 280
             G + T  +   R  +++ G    G+LGHG++ D   P+ I  L+ +  + QIA G S+
Sbjct: 72  ACGADHTLAYSESRNELYSWGWGDFGRLGHGNSSDLLIPQPIIALQGL-RIKQIACGDSH 130

Query: 281 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 340
            LAVT  G V S+G   N  LG G   D L P+ IQ F  KG+ +  V+AG EH VA+  
Sbjct: 131 CLAVTMEGEVQSWGRNQNGQLGLGNTEDSLVPQKIQAF--KGVPIKMVAAGAEHSVAITE 188

Query: 341 SGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 400
           +G +Y WG G  G LG GD  D+  PE +SS+     V V    R T  +  +G +Y +G
Sbjct: 189 NGELYGWGWGRYGNLGLGDRNDRWNPEKVSSVDCDKMVMVACGWRHTISVSSSGGIYTYG 248

Query: 401 WMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERA 460
           W  +G LG    G  +  L P+ L +L    +SQ+S G  H++ +T  G LFG+G N+  
Sbjct: 249 WSKYGQLG---HGNFEDSLVPQKLQALSDKLISQVSGGWRHSMALTSTGLLFGWGWNKFG 305

Query: 461 QLG-HDTLRGCLEPTEIFIQE 480
           Q+G  D L  C      F Q+
Sbjct: 306 QVGVGDNLDHCSPVQVKFPQD 326



 Score =  156 bits (395), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 111/355 (31%), Positives = 182/355 (51%), Gaps = 11/355 (3%)

Query: 116 ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           I+ G  HT+ L+S + V S G    G LGHG +T      T+++   A H+  ++   +H
Sbjct: 19  ISAGASHTVALLSGNVVCSWGRGEDGQLGHG-DTDDRPLPTQLSALDAQHIDSIACGADH 77

Query: 175 A-AFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
             A+     ++++ G       GH +++  +  P+ + AL+G+  KQ+  G +    +T+
Sbjct: 78  TLAYSESRNELYSWGWGDFGRLGHGNSSD-LLIPQPIIALQGLRIKQIACGDSHCLAVTM 136

Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
            G V + G N +GQLG G+T D   P+ I   + V  +  +AAG  + +A+T NG +Y +
Sbjct: 137 EGEVQSWGRNQNGQLGLGNTEDSLVPQKIQAFKGV-PIKMVAAGAEHSVAITENGELYGW 195

Query: 294 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 353
           G G    LG G+++D   P  + +       +V V+ G  H +++ SSG +YT+G    G
Sbjct: 196 GWGRYGNLGLGDRNDRWNPEKVSSVDCD--KMVMVACGWRHTISVSSSGGIYTYGWSKYG 253

Query: 354 ALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRG 413
            LGHG+  D  +P+ L +L   L  QV    R +  L  TG ++G+GW  FG +G  D  
Sbjct: 254 QLGHGNFEDSLVPQKLQALSDKLISQVSGGWRHSMALTSTGLLFGWGWNKFGQVGVGD-- 311

Query: 414 VSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH-DTL 467
            +     P  +   +   V QIS G  HT+ VT++  +F +G     QLGH DT+
Sbjct: 312 -NLDHCSPVQVKFPQDQRVVQISCGWRHTIAVTEKENVFSWGRGTNGQLGHGDTI 365



 Score =  122 bits (305), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 94/328 (28%), Positives = 153/328 (46%), Gaps = 9/328 (2%)

Query: 116 ITTGRYHTLLISNS--SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
           I  G  HTL  S S   ++S G    G LGHG  +   +    I       + Q++  ++
Sbjct: 71  IACGADHTLAYSESRNELYSWGWGDFGRLGHGNSSDLLIPQPIIAL-QGLRIKQIACGDS 129

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
           H   V   G+V + G N +   G  +T   +  P+ ++A KGVP K V AG   +  +T 
Sbjct: 130 HCLAVTMEGEVQSWGRNQNGQLGLGNTEDSLV-PQKIQAFKGVPIKMVAAGAEHSVAITE 188

Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
            G ++  G   +G LG GD  DR  P+ ++ ++    +V +A G  + ++V+ +G +Y++
Sbjct: 189 NGELYGWGWGRYGNLGLGDRNDRWNPEKVSSVD-CDKMVMVACGWRHTISVSSSGGIYTY 247

Query: 294 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 353
           G      LGHG   D L P+ +Q    K I   +VS G  H +AL S+G ++ WG    G
Sbjct: 248 GWSKYGQLGHGNFEDSLVPQKLQALSDKLIS--QVSGGWRHSMALTSTGLLFGWGWNKFG 305

Query: 354 ALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD-- 411
            +G GD +D   P  +   +    VQ+    R T  + +  +V+ +G    G LG  D  
Sbjct: 306 QVGVGDNLDHCSPVQVKFPQDQRVVQISCGWRHTIAVTEKENVFSWGRGTNGQLGHGDTI 365

Query: 412 RGVSDKVLRPRILDSLRAHHVSQISTGL 439
              S K++    +D     H+   +T L
Sbjct: 366 DRNSPKIIEALSVDGSAGPHIESSNTDL 393


>gi|379318631|pdb|4DNV|A Chain A, Crystal Structure Of The W285f Mutant Of Uvb-Resistance
           Protein Uvr8
 gi|379318632|pdb|4DNV|B Chain B, Crystal Structure Of The W285f Mutant Of Uvb-Resistance
           Protein Uvr8
 gi|379318633|pdb|4DNV|C Chain C, Crystal Structure Of The W285f Mutant Of Uvb-Resistance
           Protein Uvr8
 gi|379318634|pdb|4DNV|D Chain D, Crystal Structure Of The W285f Mutant Of Uvb-Resistance
           Protein Uvr8
          Length = 370

 Score =  156 bits (395), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 112/350 (32%), Positives = 174/350 (49%), Gaps = 10/350 (2%)

Query: 116 ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           I+ G  H++ L+S   V S G    G LGHG +     S T+++      +V V+   +H
Sbjct: 9   ISAGASHSVALLSGDIVCSWGRGEDGQLGHG-DAEDRPSPTQLSALDGHQIVSVTCGADH 67

Query: 175 AAFVLQSG-QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
                QSG +V++ G       GH +++  +F P  ++AL G+  KQ+  G +    +T+
Sbjct: 68  TVAYSQSGMEVYSWGWGDFGRLGHGNSS-DLFTPLPIKALHGIRIKQIACGDSHCLAVTM 126

Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
            G V + G N +GQLG GDT D   P+ I   E +  +  +AAG  +  AVT +G +Y +
Sbjct: 127 EGEVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGI-RIKMVAAGAEHTAAVTEDGDLYGW 185

Query: 294 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 353
           G G    LG G++ D L P  + +    G  +  V+ G  H +++  SG +YT+G    G
Sbjct: 186 GWGRYGNLGLGDRTDRLVPERVTS--TGGEKMSMVACGWRHTISVSYSGALYTYGWSKYG 243

Query: 354 ALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRG 413
            LGHGD  D  +P  L +L +    Q+    R T  L   G +YG+GW  FG +G  +  
Sbjct: 244 QLGHGDLEDHLIPHKLEALSNSFISQISGGFRHTMALTSDGKLYGWGWNKFGQVGVGNNL 303

Query: 414 VSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 463
                ++ R  D  +   V Q+S G  HT+ VT+R  +F +G     QLG
Sbjct: 304 DQCSPVQVRFPDDQK---VVQVSCGWRHTLAVTERNNVFAWGRGTNGQLG 350



 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 78/241 (32%), Positives = 127/241 (52%), Gaps = 7/241 (2%)

Query: 237 VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV-VYSFGS 295
           V + G    GQLGHGD  DRP+P  ++ L+    +V +  G  + +A + +G+ VYS+G 
Sbjct: 25  VCSWGRGEDGQLGHGDAEDRPSPTQLSALDGH-QIVSVTCGADHTVAYSQSGMEVYSWGW 83

Query: 296 GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGAL 355
           G    LGHG   D   P  I+     GI + +++ GD H +A+   G V +WG+   G L
Sbjct: 84  GDFGRLGHGNSSDLFTPLPIKALH--GIRIKQIACGDSHCLAVTMEGEVQSWGRNQNGQL 141

Query: 356 GHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVS 415
           G GD  D  +P+ + + +      V A    T  + + G +YG+GW  +G+LG  DR  +
Sbjct: 142 GLGDTEDSLVPQKIQAFEGIRIKMVAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDR--T 199

Query: 416 DKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTE 475
           D+++ P  + S     +S ++ G  HT+ V+  G L+ +G ++  QLGH  L   L P +
Sbjct: 200 DRLV-PERVTSTGGEKMSMVACGWRHTISVSYSGALYTYGWSKYGQLGHGDLEDHLIPHK 258

Query: 476 I 476
           +
Sbjct: 259 L 259



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 75/260 (28%), Positives = 118/260 (45%), Gaps = 8/260 (3%)

Query: 115 QITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
           QI  G  H L ++    V S G +  G LG G +T   +   +I       +  V+A   
Sbjct: 113 QIACGDSHCLAVTMEGEVQSWGRNQNGQLGLG-DTEDSLVPQKIQAFEGIRIKMVAAGAE 171

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRD-TNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
           H A V + G ++  G       G  D T+R +  P  V +  G     V  G   T  ++
Sbjct: 172 HTAAVTEDGDLYGWGWGRYGNLGLGDRTDRLV--PERVTSTGGEKMSMVACGWRHTISVS 229

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
             G ++T G + +GQLGHGD  D   P  +  L     + QI+ G  + +A+T +G +Y 
Sbjct: 230 YSGALYTYGWSKYGQLGHGDLEDHLIPHKLEALSN-SFISQISGGFRHTMALTSDGKLYG 288

Query: 293 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 352
           +G      +G G   D+  P  +Q        VV+VS G  H +A+     V+ WG+G  
Sbjct: 289 WGWNKFGQVGVGNNLDQCSP--VQVRFPDDQKVVQVSCGWRHTLAVTERNNVFAWGRGTN 346

Query: 353 GALGHGDEIDKTLPEPLSSL 372
           G LG G+ +D+  P+ + +L
Sbjct: 347 GQLGIGESVDRNFPKIIEAL 366



 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 56/153 (36%), Positives = 74/153 (48%), Gaps = 4/153 (2%)

Query: 325 VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARK 384
           V+ +SAG  H VAL S   V +WG+G  G LGHGD  D+  P  LS+L  H  V V    
Sbjct: 6   VLIISAGASHSVALLSGDIVCSWGRGEDGQLGHGDAEDRPSPTQLSALDGHQIVSVTCGA 65

Query: 385 RKTFVLVDTG-SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV 443
             T     +G  VY +GW  FG LG    G S  +  P  + +L    + QI+ G  H +
Sbjct: 66  DHTVAYSQSGMEVYSWGWGDFGRLG---HGNSSDLFTPLPIKALHGIRIKQIACGDSHCL 122

Query: 444 VVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 476
            VT  G +  +G N+  QLG       L P +I
Sbjct: 123 AVTMEGEVQSWGRNQNGQLGLGDTEDSLVPQKI 155



 Score = 74.7 bits (182), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 61/209 (29%), Positives = 96/209 (45%), Gaps = 6/209 (2%)

Query: 116 ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           +  G  HT  ++ +  ++  G    G LG G  T + V   R+       +  V+    H
Sbjct: 166 VAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRTDRLVP-ERVTSTGGEKMSMVACGWRH 224

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 234
              V  SG ++T G +     GH D    +  P  +EAL      Q++ G   T  LT  
Sbjct: 225 TISVSYSGALYTYGWSKYGQLGHGDLEDHLI-PHKLEALSNSFISQISGGFRHTMALTSD 283

Query: 235 GHVHTCGSNTHGQLGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
           G ++  G N  GQ+G G+ LD+ +P  +  P ++   VVQ++ G  + LAVT    V+++
Sbjct: 284 GKLYGWGWNKFGQVGVGNNLDQCSPVQVRFPDDQ--KVVQVSCGWRHTLAVTERNNVFAW 341

Query: 294 GSGSNFCLGHGEQHDELQPRAIQTFRRKG 322
           G G+N  LG GE  D   P+ I+     G
Sbjct: 342 GRGTNGQLGIGESVDRNFPKIIEALSVDG 370


>gi|312282233|dbj|BAJ33982.1| unnamed protein product [Thellungiella halophila]
          Length = 440

 Score =  156 bits (395), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 111/350 (31%), Positives = 177/350 (50%), Gaps = 10/350 (2%)

Query: 116 ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           I+ G  H++ L+S   V S G    G LGHG +    +S T+++      +V V+   +H
Sbjct: 20  ISAGASHSVALLSGDIVCSWGRGEDGQLGHG-DAEDRLSPTQLSALDDHQIVSVTCGADH 78

Query: 175 A-AFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
             A+     +V++ G       GH +++  +F P  ++AL G+  KQ+  G +    +T+
Sbjct: 79  TVAYSESRMEVYSWGWGDFGRLGHGNSS-DLFTPLPIKALHGIRIKQIACGDSHCLAVTM 137

Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
            G V + G N +GQLG GDT D   P+ I   E +  +  +AAG  +  AVT +G +Y +
Sbjct: 138 EGEVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGI-RIKMVAAGAEHTAAVTEDGDLYGW 196

Query: 294 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 353
           G G    LG G+++D L P  + +    G  +  V+ G  H +++  SG +YT+G    G
Sbjct: 197 GWGRYGNLGLGDRNDRLVPERVTSA--GGEKMSMVACGWRHTISVSYSGALYTYGWSKYG 254

Query: 354 ALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRG 413
            LGHGD  D  +P  L +L + +  Q+    R T  L   G +YG+GW  FG +G  +  
Sbjct: 255 QLGHGDLEDHLVPHKLEALGNSVISQISGGWRHTMALTSDGKLYGWGWNKFGQVGVGNNL 314

Query: 414 VSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 463
                ++ RI D  +   V Q+S G  HT+ VT+R  +F +G     QLG
Sbjct: 315 DQCSPVQVRIPDDQK---VVQVSCGWRHTLAVTERNNVFAWGRGTNGQLG 361



 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 110/326 (33%), Positives = 163/326 (50%), Gaps = 10/326 (3%)

Query: 160 PSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCK 219
           P    V+ +SA  +H+  +L    V + G       GH D    +  P  + AL      
Sbjct: 12  PPPRRVLIISAGASHSVALLSGDIVCSWGRGEDGQLGHGDAEDRL-SPTQLSALDDHQIV 70

Query: 220 QVTAGLNFT-GFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGP 278
            VT G + T  +   R  V++ G    G+LGHG++ D  TP  I  L  +  + QIA G 
Sbjct: 71  SVTCGADHTVAYSESRMEVYSWGWGDFGRLGHGNSSDLFTPLPIKALHGI-RIKQIACGD 129

Query: 279 SYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
           S+ LAVT  G V S+G   N  LG G+  D L P+ IQ F  +GI +  V+AG EH  A+
Sbjct: 130 SHCLAVTMEGEVQSWGRNQNGQLGLGDTEDSLVPQKIQAF--EGIRIKMVAAGAEHTAAV 187

Query: 339 DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYG 398
              G +Y WG G  G LG GD  D+ +PE ++S        V    R T  +  +G++Y 
Sbjct: 188 TEDGDLYGWGWGRYGNLGLGDRNDRLVPERVTSAGGEKMSMVACGWRHTISVSYSGALYT 247

Query: 399 FGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNE 458
           +GW  +G LG  D    +  L P  L++L    +SQIS G  HT+ +T  G+L+G+G N+
Sbjct: 248 YGWSKYGQLGHGDL---EDHLVPHKLEALGNSVISQISGGWRHTMALTSDGKLYGWGWNK 304

Query: 459 RAQLG-HDTLRGCLEPTEIFIQEMEE 483
             Q+G  + L  C  P ++ I + ++
Sbjct: 305 FGQVGVGNNLDQC-SPVQVRIPDDQK 329



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 77/261 (29%), Positives = 119/261 (45%), Gaps = 10/261 (3%)

Query: 115 QITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
           QI  G  H L ++    V S G +  G LG G +T   +   +I       +  V+A   
Sbjct: 124 QIACGDSHCLAVTMEGEVQSWGRNQNGQLGLG-DTEDSLVPQKIQAFEGIRIKMVAAGAE 182

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
           H A V + G ++  G       G  D N  +  P  V +  G     V  G   T  ++ 
Sbjct: 183 HTAAVTEDGDLYGWGWGRYGNLGLGDRNDRLV-PERVTSAGGEKMSMVACGWRHTISVSY 241

Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV--QIAAGPSYMLAVTGNGVVY 291
            G ++T G + +GQLGHGD  D   P     LE +G+ V  QI+ G  + +A+T +G +Y
Sbjct: 242 SGALYTYGWSKYGQLGHGDLEDHLVPHK---LEALGNSVISQISGGWRHTMALTSDGKLY 298

Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 351
            +G      +G G   D+  P  +Q        VV+VS G  H +A+     V+ WG+G 
Sbjct: 299 GWGWNKFGQVGVGNNLDQCSP--VQVRIPDDQKVVQVSCGWRHTLAVTERNNVFAWGRGT 356

Query: 352 CGALGHGDEIDKTLPEPLSSL 372
            G LG G+ +D+  P+ + +L
Sbjct: 357 NGQLGIGESLDRNFPKIIEAL 377



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 59/208 (28%), Positives = 94/208 (45%), Gaps = 4/208 (1%)

Query: 116 ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           +  G  HT  ++ +  ++  G    G LG G    + V   R+       +  V+    H
Sbjct: 177 VAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRNDRLVP-ERVTSAGGEKMSMVACGWRH 235

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 234
              V  SG ++T G +     GH D    +  P  +EAL      Q++ G   T  LT  
Sbjct: 236 TISVSYSGALYTYGWSKYGQLGHGDLEDHLV-PHKLEALGNSVISQISGGWRHTMALTSD 294

Query: 235 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 294
           G ++  G N  GQ+G G+ LD+ +P  +  + +   VVQ++ G  + LAVT    V+++G
Sbjct: 295 GKLYGWGWNKFGQVGVGNNLDQCSPVQVR-IPDDQKVVQVSCGWRHTLAVTERNNVFAWG 353

Query: 295 SGSNFCLGHGEQHDELQPRAIQTFRRKG 322
            G+N  LG GE  D   P+ I+     G
Sbjct: 354 RGTNGQLGIGESLDRNFPKIIEALSVDG 381



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 52/172 (30%), Positives = 82/172 (47%), Gaps = 12/172 (6%)

Query: 109 TSAGNMQITT---GRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAH 164
           TSAG  +++    G  HT+ +S S ++++ G S  G LGHG      V   ++     + 
Sbjct: 219 TSAGGEKMSMVACGWRHTISVSYSGALYTYGWSKYGQLGHGDLEDHLVPH-KLEALGNSV 277

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCG---HRDTNRPIFRPRLVEALKGVPCKQV 221
           + Q+S    H   +   G+++  G N     G   + D   P+ + R+ +  K V   QV
Sbjct: 278 ISQISGGWRHTMALTSDGKLYGWGWNKFGQVGVGNNLDQCSPV-QVRIPDDQKVV---QV 333

Query: 222 TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
           + G   T  +T R +V   G  T+GQLG G++LDR  PK I  L   G+  Q
Sbjct: 334 SCGWRHTLAVTERNNVFAWGRGTNGQLGIGESLDRNFPKIIEALSVDGASGQ 385


>gi|326511771|dbj|BAJ92030.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 442

 Score =  156 bits (395), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 106/315 (33%), Positives = 168/315 (53%), Gaps = 12/315 (3%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDT-NRPIFRPRLVEALKGVPCKQVTA 223
           V+ +SA  NH+A +L    V + G       GH D+ +RP+  P ++ +        V  
Sbjct: 23  VILISAGANHSAALLSGQMVCSWGRGEDGQLGHGDSEDRPV--PTVLTSFDVPRVTSVIC 80

Query: 224 GLNFT-GFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 282
           G + T  +      +++ G    G+LGHG++ D   P+ I  L+ +  + QIA G S+ L
Sbjct: 81  GADHTIAYSDDEMQLYSWGWGDFGRLGHGNSSDVFNPQPIVALQGM-KIKQIACGDSHCL 139

Query: 283 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
            VT NG V+S+G   N  LG G   D L P+ I+ F  +G+ V  ++AG EH  A+   G
Sbjct: 140 TVTFNGQVHSWGRNQNGQLGLGNNQDSLLPQKIKAF--EGVCVKMIAAGAEHTTAITEGG 197

Query: 343 YVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWM 402
            +Y WG G  G LG  D  D+++PE +SS++    V V    R +  +  +G++Y +GW 
Sbjct: 198 DLYGWGWGRYGNLGLSDRDDRSVPEKVSSVEGEKMVLVACGWRHSVSVSSSGALYTYGWS 257

Query: 403 GFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQL 462
            +G LG  D    D ++ PR L++L+   +SQIS G  HT+ V + G+L+G+G N+  Q+
Sbjct: 258 KYGQLGHGD--FQDHLV-PRKLEALKDVPISQISGGWRHTMAVAEDGKLYGWGWNKFGQV 314

Query: 463 G-HDTLRGCLEPTEI 476
           G  D +  C  P E+
Sbjct: 315 GVEDNVDHC-SPVEV 328



 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 110/354 (31%), Positives = 171/354 (48%), Gaps = 16/354 (4%)

Query: 116 ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVS--FTRINFPSAAHVVQVSASE 172
           I+ G  H+  L+S   V S G    G LGHG    + V    T  + P    V+    ++
Sbjct: 26  ISAGANHSAALLSGQMVCSWGRGEDGQLGHGDSEDRPVPTVLTSFDVPRVTSVI--CGAD 83

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
           +  A+     Q+++ G       GH +++  +F P+ + AL+G+  KQ+  G +    +T
Sbjct: 84  HTIAYSDDEMQLYSWGWGDFGRLGHGNSSD-VFNPQPIVALQGMKIKQIACGDSHCLTVT 142

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
             G VH+ G N +GQLG G+  D   P+ I   E V  V  IAAG  +  A+T  G +Y 
Sbjct: 143 FNGQVHSWGRNQNGQLGLGNNQDSLLPQKIKAFEGV-CVKMIAAGAEHTTAITEGGDLYG 201

Query: 293 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 352
           +G G    LG  ++ D   P  + +   +G  +V V+ G  H V++ SSG +YT+G    
Sbjct: 202 WGWGRYGNLGLSDRDDRSVPEKVSSV--EGEKMVLVACGWRHSVSVSSSGALYTYGWSKY 259

Query: 353 GALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDR 412
           G LGHGD  D  +P  L +LK     Q+    R T  + + G +YG+GW  FG +     
Sbjct: 260 GQLGHGDFQDHLVPRKLEALKDVPISQISGGWRHTMAVAEDGKLYGWGWNKFGQV----- 314

Query: 413 GVSDKV--LRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 464
           GV D V    P  ++      + Q++ G  HT+ +T+   +F +G     QLGH
Sbjct: 315 GVEDNVDHCSPVEVNFPDEQKIVQVACGWRHTLALTENKNIFSWGRGASGQLGH 368



 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 80/334 (23%), Positives = 142/334 (42%), Gaps = 57/334 (17%)

Query: 116 ITTGRYHTLLISNSSV--FSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
           +  G  HT+  S+  +  +S G    G LGHG  ++   +   I       + Q++  ++
Sbjct: 78  VICGADHTIAYSDDEMQLYSWGWGDFGRLGHG-NSSDVFNPQPIVALQGMKIKQIACGDS 136

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
           H   V  +GQV + G N +   G    N+    P+ ++A +GV  K + AG   T  +T 
Sbjct: 137 HCLTVTFNGQVHSWGRNQNGQLG-LGNNQDSLLPQKIKAFEGVCVKMIAAGAEHTTAITE 195

Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
            G ++  G   +G LG  D  DR  P+ ++ +E    +V +A G  + ++V+ +G +Y++
Sbjct: 196 GGDLYGWGWGRYGNLGLSDRDDRSVPEKVSSVEGE-KMVLVACGWRHSVSVSSSGALYTY 254

Query: 294 GSGSNFCLGHGEQHDELQPRAIQTFRRKGI------------------------------ 323
           G      LGHG+  D L PR ++  +   I                              
Sbjct: 255 GWSKYGQLGHGDFQDHLVPRKLEALKDVPISQISGGWRHTMAVAEDGKLYGWGWNKFGQV 314

Query: 324 --------------------HVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK 363
                                +V+V+ G  H +AL  +  +++WG+G  G LGHG+ ID+
Sbjct: 315 GVEDNVDHCSPVEVNFPDEQKIVQVACGWRHTLALTENKNIFSWGRGASGQLGHGEIIDR 374

Query: 364 TLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVY 397
             P+ + +L   L    C +   + V+  T  V+
Sbjct: 375 NTPKMIDALS--LDGSACKQLESSNVVPMTVKVW 406



 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 58/195 (29%), Positives = 91/195 (46%), Gaps = 6/195 (3%)

Query: 270 SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS 329
           SV+ I+AG ++  A+    +V S+G G +  LGHG+  D   P  + +F      V  V 
Sbjct: 22  SVILISAGANHSAALLSGQMVCSWGRGEDGQLGHGDSEDRPVPTVLTSFDVP--RVTSVI 79

Query: 330 AGDEHVVAL-DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTF 388
            G +H +A  D    +Y+WG G  G LGHG+  D   P+P+ +L+     Q+        
Sbjct: 80  CGADHTIAYSDDEMQLYSWGWGDFGRLGHGNSSDVFNPQPIVALQGMKIKQIACGDSHCL 139

Query: 389 VLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDR 448
            +   G V+ +G    G LG    G +   L P+ + +     V  I+ G  HT  +T+ 
Sbjct: 140 TVTFNGQVHSWGRNQNGQLGL---GNNQDSLLPQKIKAFEGVCVKMIAAGAEHTTAITEG 196

Query: 449 GRLFGFGDNERAQLG 463
           G L+G+G      LG
Sbjct: 197 GDLYGWGWGRYGNLG 211


>gi|326509355|dbj|BAJ91594.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|326518534|dbj|BAJ88296.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 442

 Score =  156 bits (394), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 106/315 (33%), Positives = 168/315 (53%), Gaps = 12/315 (3%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDT-NRPIFRPRLVEALKGVPCKQVTA 223
           V+ +SA  NH+A +L    V + G       GH D+ +RP+  P ++ +        V  
Sbjct: 23  VILISAGANHSAALLSGQMVCSWGRGEDGQLGHGDSEDRPV--PTVLTSFDVPRVTSVIC 80

Query: 224 GLNFT-GFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 282
           G + T  +      +++ G    G+LGHG++ D   P+ I  L+ +  + QIA G S+ L
Sbjct: 81  GADHTIAYSDDEMQLYSWGWGDFGRLGHGNSSDVFNPQPIVALQGM-KIKQIACGDSHCL 139

Query: 283 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
            VT NG V+S+G   N  LG G   D L P+ I+ F  +G+ V  ++AG EH  A+   G
Sbjct: 140 TVTFNGQVHSWGRNQNGQLGLGNNQDSLLPQKIKAF--EGVCVKMIAAGAEHTTAITEGG 197

Query: 343 YVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWM 402
            +Y WG G  G LG  D  D+++PE +SS++    V V    R +  +  +G++Y +GW 
Sbjct: 198 DLYGWGWGRYGNLGLSDRDDRSVPEKVSSVEGEKMVLVACGWRHSVSVSSSGALYTYGWS 257

Query: 403 GFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQL 462
            +G LG  D    D ++ PR L++L+   +SQIS G  HT+ V + G+L+G+G N+  Q+
Sbjct: 258 KYGQLGHGD--FQDHLV-PRKLEALKDVPISQISGGWRHTMAVAEDGKLYGWGWNKFGQV 314

Query: 463 G-HDTLRGCLEPTEI 476
           G  D +  C  P E+
Sbjct: 315 GVEDNVDHC-SPVEV 328



 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 110/354 (31%), Positives = 171/354 (48%), Gaps = 16/354 (4%)

Query: 116 ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVS--FTRINFPSAAHVVQVSASE 172
           I+ G  H+  L+S   V S G    G LGHG    + V    T  + P    V+    ++
Sbjct: 26  ISAGANHSAALLSGQMVCSWGRGEDGQLGHGDSEDRPVPTVLTSFDVPRVTSVI--CGAD 83

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
           +  A+     Q+++ G       GH +++  +F P+ + AL+G+  KQ+  G +    +T
Sbjct: 84  HTIAYSDDEMQLYSWGWGDFGRLGHGNSSD-VFNPQPIVALQGMKIKQIACGDSHCLTVT 142

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
             G VH+ G N +GQLG G+  D   P+ I   E V  V  IAAG  +  A+T  G +Y 
Sbjct: 143 FNGQVHSWGRNQNGQLGLGNNQDSLLPQKIKAFEGV-CVKMIAAGAEHTTAITEGGDLYG 201

Query: 293 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 352
           +G G    LG  ++ D   P  + +   +G  +V V+ G  H V++ SSG +YT+G    
Sbjct: 202 WGWGRYGNLGLSDRDDRSVPEKVSSV--EGEKMVLVACGWRHSVSVSSSGALYTYGWSKY 259

Query: 353 GALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDR 412
           G LGHGD  D  +P  L +LK     Q+    R T  + + G +YG+GW  FG +     
Sbjct: 260 GQLGHGDFQDHLVPRKLEALKDVPISQISGGWRHTMAVAEDGKLYGWGWNKFGQV----- 314

Query: 413 GVSDKV--LRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 464
           GV D V    P  ++      + Q++ G  HT+ +T+   +F +G     QLGH
Sbjct: 315 GVEDNVDHCSPVEVNFPDEQKIVQVACGWRHTLALTENKNIFSWGRGASGQLGH 368



 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 80/334 (23%), Positives = 142/334 (42%), Gaps = 57/334 (17%)

Query: 116 ITTGRYHTLLISNSSV--FSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
           +  G  HT+  S+  +  +S G    G LGHG  ++   +   I       + Q++  ++
Sbjct: 78  VICGADHTIAYSDDEMQLYSWGWGDFGRLGHG-NSSDVFNPQPIVALQGMKIKQIACGDS 136

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
           H   V  +GQV + G N +   G    N+    P+ ++A +GV  K + AG   T  +T 
Sbjct: 137 HCLTVTFNGQVHSWGRNQNGQLG-LGNNQDSLLPQKIKAFEGVCVKMIAAGAEHTTAITE 195

Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
            G ++  G   +G LG  D  DR  P+ ++ +E    +V +A G  + ++V+ +G +Y++
Sbjct: 196 GGDLYGWGWGRYGNLGLSDRDDRSVPEKVSSVEGE-KMVLVACGWRHSVSVSSSGALYTY 254

Query: 294 GSGSNFCLGHGEQHDELQPRAIQTFRRKGI------------------------------ 323
           G      LGHG+  D L PR ++  +   I                              
Sbjct: 255 GWSKYGQLGHGDFQDHLVPRKLEALKDVPISQISGGWRHTMAVAEDGKLYGWGWNKFGQV 314

Query: 324 --------------------HVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK 363
                                +V+V+ G  H +AL  +  +++WG+G  G LGHG+ ID+
Sbjct: 315 GVEDNVDHCSPVEVNFPDEQKIVQVACGWRHTLALTENKNIFSWGRGASGQLGHGEIIDR 374

Query: 364 TLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVY 397
             P+ + +L   L    C +   + V+  T  V+
Sbjct: 375 NTPKMIDALS--LDGSACKQLESSNVVPMTVKVW 406



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 58/195 (29%), Positives = 91/195 (46%), Gaps = 6/195 (3%)

Query: 270 SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS 329
           SV+ I+AG ++  A+    +V S+G G +  LGHG+  D   P  + +F      V  V 
Sbjct: 22  SVILISAGANHSAALLSGQMVCSWGRGEDGQLGHGDSEDRPVPTVLTSFDVP--RVTSVI 79

Query: 330 AGDEHVVAL-DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTF 388
            G +H +A  D    +Y+WG G  G LGHG+  D   P+P+ +L+     Q+        
Sbjct: 80  CGADHTIAYSDDEMQLYSWGWGDFGRLGHGNSSDVFNPQPIVALQGMKIKQIACGDSHCL 139

Query: 389 VLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDR 448
            +   G V+ +G    G LG    G +   L P+ + +     V  I+ G  HT  +T+ 
Sbjct: 140 TVTFNGQVHSWGRNQNGQLGL---GNNQDSLLPQKIKAFEGVCVKMIAAGAEHTTAITEG 196

Query: 449 GRLFGFGDNERAQLG 463
           G L+G+G      LG
Sbjct: 197 GDLYGWGWGRYGNLG 211



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 53/197 (26%), Positives = 82/197 (41%), Gaps = 16/197 (8%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           +  G  H++ +S+S ++++ G S  G LGHG      V   ++       + Q+S    H
Sbjct: 235 VACGWRHSVSVSSSGALYTYGWSKYGQLGHGDFQDHLVP-RKLEALKDVPISQISGGWRH 293

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 234
              V + G+++  G N     G  D N     P  V         QV  G   T  LT  
Sbjct: 294 TMAVAEDGKLYGWGWNKFGQVGVED-NVDHCSPVEVNFPDEQKIVQVACGWRHTLALTEN 352

Query: 235 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSV-------------VQIAAGPSYM 281
            ++ + G    GQLGHG+ +DR TPK I  L   GS              V++   PS  
Sbjct: 353 KNIFSWGRGASGQLGHGEIIDRNTPKMIDALSLDGSACKQLESSNVVPMTVKVWVSPSER 412

Query: 282 LAVTGNGVVYSFGSGSN 298
            A+  +  V   G+G++
Sbjct: 413 FALVPDENVCKSGNGTD 429


>gi|326507328|dbj|BAJ95741.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 343

 Score =  155 bits (392), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 106/320 (33%), Positives = 160/320 (50%), Gaps = 8/320 (2%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           VV VSA  +H+  +L    + T G       GH D    +  P ++          V  G
Sbjct: 16  VVLVSAGASHSVALLAGNVLCTWGRGEDGQLGHGDAEDRLV-PTVISGFDAPGITSVICG 74

Query: 225 LNFTGFLTIRGH-VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
            + T   +   H V++ G    G+LGHG++ D  TP+ +  L+ +  + Q+A G S+ LA
Sbjct: 75  ADHTTAYSEDEHQVYSWGWGDFGRLGHGNSTDVFTPQPVKALQGI-KIKQLACGDSHCLA 133

Query: 284 VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 343
           VT  G V S+G   N  LG G   D L P+ IQ F  +GI V  ++AG EH  A+   G 
Sbjct: 134 VTMAGEVLSWGRNQNGQLGLGTTEDSLLPQTIQAF--EGISVKMIAAGAEHTAAVTEDGD 191

Query: 344 VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 403
           +Y WG G  G LG GD  D+ +PE +SS++    V V    R T  +  +GS+Y +GW  
Sbjct: 192 IYGWGWGRYGNLGLGDRNDRFVPEKVSSVEGDKMVLVACGWRHTITVSSSGSLYTYGWSK 251

Query: 404 FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 463
           +G LG  D    +  L P  +++L+    SQIS G  HT+ +T  G+L+G+G N+  Q+G
Sbjct: 252 YGQLGHGDF---EDHLVPHKVEALKDSSTSQISGGWRHTMALTSDGKLYGWGWNKFGQVG 308

Query: 464 HDTLRGCLEPTEIFIQEMEE 483
                    P ++   E ++
Sbjct: 309 AGDNADHCSPAQVNFPEEQK 328



 Score =  144 bits (362), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 100/332 (30%), Positives = 163/332 (49%), Gaps = 8/332 (2%)

Query: 116 ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           ++ G  H++ L++ + + + G    G LGHG    + V      F +      +  +++ 
Sbjct: 19  VSAGASHSVALLAGNVLCTWGRGEDGQLGHGDAEDRLVPTVISGFDAPGITSVICGADHT 78

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 234
            A+     QV++ G       GH ++   +F P+ V+AL+G+  KQ+  G +    +T+ 
Sbjct: 79  TAYSEDEHQVYSWGWGDFGRLGHGNSTD-VFTPQPVKALQGIKIKQLACGDSHCLAVTMA 137

Query: 235 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 294
           G V + G N +GQLG G T D   P++I   E + SV  IAAG  +  AVT +G +Y +G
Sbjct: 138 GEVLSWGRNQNGQLGLGTTEDSLLPQTIQAFEGI-SVKMIAAGAEHTAAVTEDGDIYGWG 196

Query: 295 SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGA 354
            G    LG G+++D   P  + +   +G  +V V+ G  H + + SSG +YT+G    G 
Sbjct: 197 WGRYGNLGLGDRNDRFVPEKVSSV--EGDKMVLVACGWRHTITVSSSGSLYTYGWSKYGQ 254

Query: 355 LGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGV 414
           LGHGD  D  +P  + +LK     Q+    R T  L   G +YG+GW  FG +G  D   
Sbjct: 255 LGHGDFEDHLVPHKVEALKDSSTSQISGGWRHTMALTSDGKLYGWGWNKFGQVGAGDNA- 313

Query: 415 SDKVLRPRILDSLRAHHVSQISTGLYHTVVVT 446
                 P  ++      V+Q++ G  HT+  T
Sbjct: 314 --DHCSPAQVNFPEEQKVAQVACGWRHTLAFT 343



 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 76/282 (26%), Positives = 126/282 (44%), Gaps = 7/282 (2%)

Query: 112 GNMQITTGRYHTLLISNSS--VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS 169
           G   +  G  HT   S     V+S G    G LGHG  +T   +   +       + Q++
Sbjct: 67  GITSVICGADHTTAYSEDEHQVYSWGWGDFGRLGHG-NSTDVFTPQPVKALQGIKIKQLA 125

Query: 170 ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
             ++H   V  +G+V + G N +   G   T   +  P+ ++A +G+  K + AG   T 
Sbjct: 126 CGDSHCLAVTMAGEVLSWGRNQNGQLGLGTTEDSLL-PQTIQAFEGISVKMIAAGAEHTA 184

Query: 230 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 289
            +T  G ++  G   +G LG GD  DR  P+ ++ +E    +V +A G  + + V+ +G 
Sbjct: 185 AVTEDGDIYGWGWGRYGNLGLGDRNDRFVPEKVSSVEG-DKMVLVACGWRHTITVSSSGS 243

Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 349
           +Y++G      LGHG+  D L P  ++  +       ++S G  H +AL S G +Y WG 
Sbjct: 244 LYTYGWSKYGQLGHGDFEDHLVPHKVEALKDS--STSQISGGWRHTMALTSDGKLYGWGW 301

Query: 350 GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 391
              G +G GD  D   P  ++  +     QV    R T    
Sbjct: 302 NKFGQVGAGDNADHCSPAQVNFPEEQKVAQVACGWRHTLAFT 343



 Score = 92.4 bits (228), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 63/258 (24%), Positives = 111/258 (43%), Gaps = 54/258 (20%)

Query: 270 SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRR--------- 320
           +VV ++AG S+ +A+    V+ ++G G +  LGHG+  D L P  I  F           
Sbjct: 15  AVVLVSAGASHSVALLAGNVLCTWGRGEDGQLGHGDAEDRLVPTVISGFDAPGITSVICG 74

Query: 321 ------------------------------------------KGIHVVRVSAGDEHVVAL 338
                                                     +GI + +++ GD H +A+
Sbjct: 75  ADHTTAYSEDEHQVYSWGWGDFGRLGHGNSTDVFTPQPVKALQGIKIKQLACGDSHCLAV 134

Query: 339 DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYG 398
             +G V +WG+   G LG G   D  LP+ + + +      + A    T  + + G +YG
Sbjct: 135 TMAGEVLSWGRNQNGQLGLGTTEDSLLPQTIQAFEGISVKMIAAGAEHTAAVTEDGDIYG 194

Query: 399 FGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNE 458
           +GW  +G+LG  DR  +D+ + P  + S+    +  ++ G  HT+ V+  G L+ +G ++
Sbjct: 195 WGWGRYGNLGLGDR--NDRFV-PEKVSSVEGDKMVLVACGWRHTITVSSSGSLYTYGWSK 251

Query: 459 RAQLGHDTLRGCLEPTEI 476
             QLGH      L P ++
Sbjct: 252 YGQLGHGDFEDHLVPHKV 269


>gi|379318630|pdb|4DNU|A Chain A, Crystal Structure Of The W285a Mutant Of Uvb-Resistance
           Protein Uvr8
          Length = 372

 Score =  154 bits (390), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 112/350 (32%), Positives = 172/350 (49%), Gaps = 10/350 (2%)

Query: 116 ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           I+ G  H++ L+S   V S G    G LGHG +     S T+++      +V V+   +H
Sbjct: 11  ISAGASHSVALLSGDIVCSWGRGEDGQLGHG-DAEDRPSPTQLSALDGHQIVSVTCGADH 69

Query: 175 AAFVLQSG-QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
                QSG +V++ G       GH +++  +F P  ++AL G+  KQ+  G +    +T 
Sbjct: 70  TVAYSQSGXEVYSWGWGDFGRLGHGNSS-DLFTPLPIKALHGIRIKQIACGDSHCLAVTX 128

Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
            G V + G N +GQLG GDT D   P+ I   E +  +  +AAG  +  AVT +G +Y +
Sbjct: 129 EGEVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGI-RIKXVAAGAEHTAAVTEDGDLYGW 187

Query: 294 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 353
           G G    LG G++ D L P  + +    G     V+ G  H +++  SG +YT+G    G
Sbjct: 188 GWGRYGNLGLGDRTDRLVPERVTS--TGGEKXSXVACGWRHTISVSYSGALYTYGWSKYG 245

Query: 354 ALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRG 413
            LGHGD  D  +P  L +L +    Q+    R T  L   G +YG+GW  FG +G  +  
Sbjct: 246 QLGHGDLEDHLIPHKLEALSNSFISQISGGARHTXALTSDGKLYGWGWNKFGQVGVGNNL 305

Query: 414 VSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 463
                ++ R  D  +   V Q+S G  HT+ VT+R  +F +G     QLG
Sbjct: 306 DQCSPVQVRFPDDQK---VVQVSCGWRHTLAVTERNNVFAWGRGTNGQLG 352



 Score =  125 bits (315), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 78/241 (32%), Positives = 125/241 (51%), Gaps = 7/241 (2%)

Query: 237 VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV-VYSFGS 295
           V + G    GQLGHGD  DRP+P  ++ L+    +V +  G  + +A + +G  VYS+G 
Sbjct: 27  VCSWGRGEDGQLGHGDAEDRPSPTQLSALDGH-QIVSVTCGADHTVAYSQSGXEVYSWGW 85

Query: 296 GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGAL 355
           G    LGHG   D   P  I+     GI + +++ GD H +A+   G V +WG+   G L
Sbjct: 86  GDFGRLGHGNSSDLFTPLPIKALH--GIRIKQIACGDSHCLAVTXEGEVQSWGRNQNGQL 143

Query: 356 GHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVS 415
           G GD  D  +P+ + + +      V A    T  + + G +YG+GW  +G+LG  DR  +
Sbjct: 144 GLGDTEDSLVPQKIQAFEGIRIKXVAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDR--T 201

Query: 416 DKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTE 475
           D+++ P  + S      S ++ G  HT+ V+  G L+ +G ++  QLGH  L   L P +
Sbjct: 202 DRLV-PERVTSTGGEKXSXVACGWRHTISVSYSGALYTYGWSKYGQLGHGDLEDHLIPHK 260

Query: 476 I 476
           +
Sbjct: 261 L 261



 Score = 90.1 bits (222), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 60/194 (30%), Positives = 91/194 (46%), Gaps = 6/194 (3%)

Query: 271 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 330
           V+ I+AG S+ +A+    +V S+G G +  LGHG+  D   P  +      G  +V V+ 
Sbjct: 8   VLIISAGASHSVALLSGDIVCSWGRGEDGQLGHGDAEDRPSPTQLSAL--DGHQIVSVTC 65

Query: 331 GDEHVVALDSSGY-VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFV 389
           G +H VA   SG  VY+WG G  G LGHG+  D   P P+ +L      Q+         
Sbjct: 66  GADHTVAYSQSGXEVYSWGWGDFGRLGHGNSSDLFTPLPIKALHGIRIKQIACGDSHCLA 125

Query: 390 LVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRG 449
           +   G V  +G    G LG  D   ++  L P+ + +     +  ++ G  HT  VT+ G
Sbjct: 126 VTXEGEVQSWGRNQNGQLGLGD---TEDSLVPQKIQAFEGIRIKXVAAGAEHTAAVTEDG 182

Query: 450 RLFGFGDNERAQLG 463
            L+G+G      LG
Sbjct: 183 DLYGWGWGRYGNLG 196



 Score = 89.7 bits (221), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 75/260 (28%), Positives = 117/260 (45%), Gaps = 8/260 (3%)

Query: 115 QITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
           QI  G  H L ++    V S G +  G LG G +T   +   +I       +  V+A   
Sbjct: 115 QIACGDSHCLAVTXEGEVQSWGRNQNGQLGLG-DTEDSLVPQKIQAFEGIRIKXVAAGAE 173

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRD-TNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
           H A V + G ++  G       G  D T+R +  P  V +  G     V  G   T  ++
Sbjct: 174 HTAAVTEDGDLYGWGWGRYGNLGLGDRTDRLV--PERVTSTGGEKXSXVACGWRHTISVS 231

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
             G ++T G + +GQLGHGD  D   P  +  L     + QI+ G  +  A+T +G +Y 
Sbjct: 232 YSGALYTYGWSKYGQLGHGDLEDHLIPHKLEALSNS-FISQISGGARHTXALTSDGKLYG 290

Query: 293 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 352
           +G      +G G   D+  P  +Q        VV+VS G  H +A+     V+ WG+G  
Sbjct: 291 WGWNKFGQVGVGNNLDQCSP--VQVRFPDDQKVVQVSCGWRHTLAVTERNNVFAWGRGTN 348

Query: 353 GALGHGDEIDKTLPEPLSSL 372
           G LG G+ +D+  P+ + +L
Sbjct: 349 GQLGIGESVDRNFPKIIEAL 368



 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 56/153 (36%), Positives = 74/153 (48%), Gaps = 4/153 (2%)

Query: 325 VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARK 384
           V+ +SAG  H VAL S   V +WG+G  G LGHGD  D+  P  LS+L  H  V V    
Sbjct: 8   VLIISAGASHSVALLSGDIVCSWGRGEDGQLGHGDAEDRPSPTQLSALDGHQIVSVTCGA 67

Query: 385 RKTFVLVDTG-SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV 443
             T     +G  VY +GW  FG LG    G S  +  P  + +L    + QI+ G  H +
Sbjct: 68  DHTVAYSQSGXEVYSWGWGDFGRLG---HGNSSDLFTPLPIKALHGIRIKQIACGDSHCL 124

Query: 444 VVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 476
            VT  G +  +G N+  QLG       L P +I
Sbjct: 125 AVTXEGEVQSWGRNQNGQLGLGDTEDSLVPQKI 157



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 61/209 (29%), Positives = 95/209 (45%), Gaps = 6/209 (2%)

Query: 116 ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           +  G  HT  ++ +  ++  G    G LG G  T + V   R+          V+    H
Sbjct: 168 VAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRTDRLVP-ERVTSTGGEKXSXVACGWRH 226

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 234
              V  SG ++T G +     GH D    +  P  +EAL      Q++ G   T  LT  
Sbjct: 227 TISVSYSGALYTYGWSKYGQLGHGDLEDHLI-PHKLEALSNSFISQISGGARHTXALTSD 285

Query: 235 GHVHTCGSNTHGQLGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
           G ++  G N  GQ+G G+ LD+ +P  +  P ++   VVQ++ G  + LAVT    V+++
Sbjct: 286 GKLYGWGWNKFGQVGVGNNLDQCSPVQVRFPDDQ--KVVQVSCGWRHTLAVTERNNVFAW 343

Query: 294 GSGSNFCLGHGEQHDELQPRAIQTFRRKG 322
           G G+N  LG GE  D   P+ I+     G
Sbjct: 344 GRGTNGQLGIGESVDRNFPKIIEALSVDG 372


>gi|356516391|ref|XP_003526878.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2-like [Glycine
           max]
          Length = 440

 Score =  154 bits (388), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 103/302 (34%), Positives = 155/302 (51%), Gaps = 8/302 (2%)

Query: 163 AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 222
           + V+ +SA  +H   +L    V + G       GH DT+  +  P  + AL       + 
Sbjct: 13  SRVLLISAGASHTVALLSGNVVCSWGRGEDGQLGHGDTDDRLL-PTHLSALDAQQIDSIA 71

Query: 223 AGLNFT-GFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 281
            G + T  +   R  +++ G    G+LGHG++ D   P+ I  L+ +  + QIA G S+ 
Sbjct: 72  CGADHTLAYSESRNELYSWGWGDFGRLGHGNSSDLLIPQPIIALQGL-RIKQIACGDSHC 130

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 341
           LAVT  G V S+G   N  LG G   D L P+ IQTF  +G+ +  V+AG EH VA+  +
Sbjct: 131 LAVTMEGEVQSWGRNQNGQLGLGTSEDSLVPQKIQTF--QGVPIKMVAAGAEHSVAITEN 188

Query: 342 GYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGW 401
           G +Y WG G  G LG GD  D+ +PE +SS+     V V    R T  +   G +Y +GW
Sbjct: 189 GELYGWGWGRYGNLGLGDRNDRWIPEKVSSVDCDKMVMVACGWRHTISVSSLGGLYTYGW 248

Query: 402 MGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQ 461
             +G LG    G  +  L P+ L +L    +SQ+S G  H++ +T  G L+G+G N+  Q
Sbjct: 249 SKYGQLG---HGNFEDSLVPQKLQALSDKLISQVSGGWRHSMALTSTGLLYGWGWNKFGQ 305

Query: 462 LG 463
           +G
Sbjct: 306 VG 307



 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 110/353 (31%), Positives = 177/353 (50%), Gaps = 14/353 (3%)

Query: 116 ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           I+ G  HT+ L+S + V S G    G LGHG +T   +  T ++   A  +  ++   +H
Sbjct: 18  ISAGASHTVALLSGNVVCSWGRGEDGQLGHG-DTDDRLLPTHLSALDAQQIDSIACGADH 76

Query: 175 A-AFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
             A+     ++++ G       GH +++  +  P+ + AL+G+  KQ+  G +    +T+
Sbjct: 77  TLAYSESRNELYSWGWGDFGRLGHGNSS-DLLIPQPIIALQGLRIKQIACGDSHCLAVTM 135

Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
            G V + G N +GQLG G + D   P+ I   + V  +  +AAG  + +A+T NG +Y +
Sbjct: 136 EGEVQSWGRNQNGQLGLGTSEDSLVPQKIQTFQGV-PIKMVAAGAEHSVAITENGELYGW 194

Query: 294 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 353
           G G    LG G+++D   P  + +       +V V+ G  H +++ S G +YT+G    G
Sbjct: 195 GWGRYGNLGLGDRNDRWIPEKVSSVDCD--KMVMVACGWRHTISVSSLGGLYTYGWSKYG 252

Query: 354 ALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRG 413
            LGHG+  D  +P+ L +L   L  QV    R +  L  TG +YG+GW  FG +     G
Sbjct: 253 QLGHGNFEDSLVPQKLQALSDKLISQVSGGWRHSMALTSTGLLYGWGWNKFGQV-----G 307

Query: 414 VSDKVLR--PRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 464
           V D V R  P  +       V QIS G  HT+ VT++  +F +G     QLGH
Sbjct: 308 VGDNVDRCSPVQVKFPHDQKVVQISCGWRHTIAVTEKENVFSWGRGTNGQLGH 360



 Score =  119 bits (299), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 78/257 (30%), Positives = 129/257 (50%), Gaps = 7/257 (2%)

Query: 221 VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 280
           ++AG + T  L     V + G    GQLGHGDT DR  P  ++ L+    +  IA G  +
Sbjct: 18  ISAGASHTVALLSGNVVCSWGRGEDGQLGHGDTDDRLLPTHLSALD-AQQIDSIACGADH 76

Query: 281 MLAVT-GNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 339
            LA +     +YS+G G    LGHG   D L P+ I     +G+ + +++ GD H +A+ 
Sbjct: 77  TLAYSESRNELYSWGWGDFGRLGHGNSSDLLIPQPIIAL--QGLRIKQIACGDSHCLAVT 134

Query: 340 SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGF 399
             G V +WG+   G LG G   D  +P+ + + +      V A    +  + + G +YG+
Sbjct: 135 MEGEVQSWGRNQNGQLGLGTSEDSLVPQKIQTFQGVPIKMVAAGAEHSVAITENGELYGW 194

Query: 400 GWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNER 459
           GW  +G+LG  DR  +D+ + P  + S+    +  ++ G  HT+ V+  G L+ +G ++ 
Sbjct: 195 GWGRYGNLGLGDR--NDRWI-PEKVSSVDCDKMVMVACGWRHTISVSSLGGLYTYGWSKY 251

Query: 460 AQLGHDTLRGCLEPTEI 476
            QLGH      L P ++
Sbjct: 252 GQLGHGNFEDSLVPQKL 268



 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 93/328 (28%), Positives = 150/328 (45%), Gaps = 9/328 (2%)

Query: 116 ITTGRYHTLLISNS--SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
           I  G  HTL  S S   ++S G    G LGHG  +   +    I       + Q++  ++
Sbjct: 70  IACGADHTLAYSESRNELYSWGWGDFGRLGHGNSSDLLIPQPIIAL-QGLRIKQIACGDS 128

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
           H   V   G+V + G N +   G   T+     P+ ++  +GVP K V AG   +  +T 
Sbjct: 129 HCLAVTMEGEVQSWGRNQNGQLG-LGTSEDSLVPQKIQTFQGVPIKMVAAGAEHSVAITE 187

Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
            G ++  G   +G LG GD  DR  P+ ++ ++    +V +A G  + ++V+  G +Y++
Sbjct: 188 NGELYGWGWGRYGNLGLGDRNDRWIPEKVSSVD-CDKMVMVACGWRHTISVSSLGGLYTY 246

Query: 294 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 353
           G      LGHG   D L P+ +Q    K I   +VS G  H +AL S+G +Y WG    G
Sbjct: 247 GWSKYGQLGHGNFEDSLVPQKLQALSDKLIS--QVSGGWRHSMALTSTGLLYGWGWNKFG 304

Query: 354 ALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD-- 411
            +G GD +D+  P  +        VQ+    R T  + +  +V+ +G    G LG  D  
Sbjct: 305 QVGVGDNVDRCSPVQVKFPHDQKVVQISCGWRHTIAVTEKENVFSWGRGTNGQLGHGDTV 364

Query: 412 RGVSDKVLRPRILDSLRAHHVSQISTGL 439
              S K++    +D     H+   +T L
Sbjct: 365 DRNSPKIIEALSVDGSSGPHIESSNTDL 392


>gi|255638076|gb|ACU19352.1| unknown [Glycine max]
          Length = 440

 Score =  154 bits (388), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 103/302 (34%), Positives = 155/302 (51%), Gaps = 8/302 (2%)

Query: 163 AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 222
           + V+ +SA  +H   +L    V + G       GH DT+  +  P  + AL       + 
Sbjct: 13  SRVLLISAGASHTVALLSGNVVCSWGRGEDGQLGHGDTDDRLL-PTHLSALDAQQIDSIA 71

Query: 223 AGLNFT-GFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 281
            G + T  +   R  +++ G    G+LGHG++ D   P+ I  L+ +  + QIA G S+ 
Sbjct: 72  CGADHTLAYSESRNELYSWGWGDFGRLGHGNSSDLLIPQPIIALQGL-RIKQIACGDSHC 130

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 341
           LAVT  G V S+G   N  LG G   D L P+ IQTF  +G+ +  V+AG EH VA+  +
Sbjct: 131 LAVTMEGEVQSWGRNQNGQLGLGTSEDSLVPQKIQTF--QGVPIKMVAAGAEHSVAITEN 188

Query: 342 GYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGW 401
           G +Y WG G  G LG GD  D+ +PE +SS+     V V    R T  +   G +Y +GW
Sbjct: 189 GELYGWGWGRYGNLGLGDRNDRWIPEKVSSVDCDKMVMVACGWRHTISVSSLGGLYTYGW 248

Query: 402 MGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQ 461
             +G LG    G  +  L P+ L +L    +SQ+S G  H++ +T  G L+G+G N+  Q
Sbjct: 249 SKYGQLG---HGNFEDSLVPQKLQALSDKLISQVSGGWRHSMALTSTGLLYGWGWNKFGQ 305

Query: 462 LG 463
           +G
Sbjct: 306 VG 307



 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 110/353 (31%), Positives = 177/353 (50%), Gaps = 14/353 (3%)

Query: 116 ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           I+ G  HT+ L+S + V S G    G LGHG +T   +  T ++   A  +  ++   +H
Sbjct: 18  ISAGASHTVALLSGNVVCSWGRGEDGQLGHG-DTDDRLLPTHLSALDAQQIDSIACGADH 76

Query: 175 A-AFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
             A+     ++++ G       GH +++  +  P+ + AL+G+  KQ+  G +    +T+
Sbjct: 77  TLAYSESRNELYSWGWGDFGRLGHGNSS-DLLIPQPIIALQGLRIKQIACGDSHCLAVTM 135

Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
            G V + G N +GQLG G + D   P+ I   + V  +  +AAG  + +A+T NG +Y +
Sbjct: 136 EGEVQSWGRNQNGQLGLGTSEDSLVPQKIQTFQGV-PIKMVAAGAEHSVAITENGELYGW 194

Query: 294 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 353
           G G    LG G+++D   P  + +       +V V+ G  H +++ S G +YT+G    G
Sbjct: 195 GWGRYGNLGLGDRNDRWIPEKVSSVDCD--KMVMVACGWRHTISVSSLGGLYTYGWSKYG 252

Query: 354 ALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRG 413
            LGHG+  D  +P+ L +L   L  QV    R +  L  TG +YG+GW  FG +     G
Sbjct: 253 QLGHGNFEDSLVPQKLQALSDKLISQVSGGWRHSMALTSTGLLYGWGWNKFGQV-----G 307

Query: 414 VSDKVLR--PRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 464
           V D V R  P  +       V QIS G  HT+ VT++  +F +G     QLGH
Sbjct: 308 VGDNVDRCSPVQVKFPHDQKVVQISCGWRHTIAVTEKENVFSWGRGTNGQLGH 360



 Score =  119 bits (299), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 78/257 (30%), Positives = 129/257 (50%), Gaps = 7/257 (2%)

Query: 221 VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 280
           ++AG + T  L     V + G    GQLGHGDT DR  P  ++ L+    +  IA G  +
Sbjct: 18  ISAGASHTVALLSGNVVCSWGRGEDGQLGHGDTDDRLLPTHLSALD-AQQIDSIACGADH 76

Query: 281 MLAVT-GNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 339
            LA +     +YS+G G    LGHG   D L P+ I     +G+ + +++ GD H +A+ 
Sbjct: 77  TLAYSESRNELYSWGWGDFGRLGHGNSSDLLIPQPIIAL--QGLRIKQIACGDSHCLAVT 134

Query: 340 SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGF 399
             G V +WG+   G LG G   D  +P+ + + +      V A    +  + + G +YG+
Sbjct: 135 MEGEVQSWGRNQNGQLGLGTSEDSLVPQKIQTFQGVPIKMVAAGAEHSVAITENGELYGW 194

Query: 400 GWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNER 459
           GW  +G+LG  DR  +D+ + P  + S+    +  ++ G  HT+ V+  G L+ +G ++ 
Sbjct: 195 GWGRYGNLGLGDR--NDRWI-PEKVSSVDCDKMVMVACGWRHTISVSSLGGLYTYGWSKY 251

Query: 460 AQLGHDTLRGCLEPTEI 476
            QLGH      L P ++
Sbjct: 252 GQLGHGNFEDSLVPQKL 268



 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 93/328 (28%), Positives = 150/328 (45%), Gaps = 9/328 (2%)

Query: 116 ITTGRYHTLLISNS--SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
           I  G  HTL  S S   ++S G    G LGHG  +   +    I       + Q++  ++
Sbjct: 70  IACGADHTLAYSESRNELYSWGWGDFGRLGHGNSSDLLIPQPIIAL-QGLRIKQIACGDS 128

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
           H   V   G+V + G N +   G   T+     P+ ++  +GVP K V AG   +  +T 
Sbjct: 129 HCLAVTMEGEVQSWGRNQNGQLG-LGTSEDSLVPQKIQTFQGVPIKMVAAGAEHSVAITE 187

Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
            G ++  G   +G LG GD  DR  P+ ++ ++    +V +A G  + ++V+  G +Y++
Sbjct: 188 NGELYGWGWGRYGNLGLGDRNDRWIPEKVSSVD-CDKMVMVACGWRHTISVSSLGGLYTY 246

Query: 294 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 353
           G      LGHG   D L P+ +Q    K I   +VS G  H +AL S+G +Y WG    G
Sbjct: 247 GWSKYGQLGHGNFEDSLVPQKLQALSDKLIS--QVSGGWRHSMALTSTGLLYGWGWNKFG 304

Query: 354 ALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD-- 411
            +G GD +D+  P  +        VQ+    R T  + +  +V+ +G    G LG  D  
Sbjct: 305 QVGVGDNVDRCSPVQVKFPHDQKVVQISCGWRHTIAVTEKENVFSWGRGTNGQLGHGDTV 364

Query: 412 RGVSDKVLRPRILDSLRAHHVSQISTGL 439
              S K++    +D     H+   +T L
Sbjct: 365 DRNSPKIIEALSVDGSSGPHIESSNTDL 392


>gi|302855419|ref|XP_002959204.1| hypothetical protein VOLCADRAFT_70529 [Volvox carteri f.
           nagariensis]
 gi|300255434|gb|EFJ39741.1| hypothetical protein VOLCADRAFT_70529 [Volvox carteri f.
           nagariensis]
          Length = 367

 Score =  153 bits (386), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 116/359 (32%), Positives = 172/359 (47%), Gaps = 9/359 (2%)

Query: 108 ETSAGNMQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVV 166
           E   G   ++ G  H++ ++S   V S G    G LGHG +  +C++   I+  + A + 
Sbjct: 10  EEEPGVTAVSCGSSHSVAILSCGIVTSWGRGEDGQLGHG-QADECLAPKAISTLTDAGIE 68

Query: 167 QVSASENHAAFVLQS-GQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 225
            V     +   V  S GQV++ G       GH D N  +F PR +E   G P  +V  G 
Sbjct: 69  SVVCGAEYTIAVAPSRGQVYSWGWGDFGRLGHGDCN-DVFVPRPIEFFSGRPVHRVACGD 127

Query: 226 NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 285
             T  +   G + T G N +GQLG G T D  +P+ +  L+    V  +A G  + LA T
Sbjct: 128 THTLVVAGEGELFTFGRNQNGQLGLGHTNDCLSPQLVVALQGE-RVRSVACGSEHSLAAT 186

Query: 286 GNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVY 345
            +G V+S+G G    LG GE  D   P  +     +GI +V    G  H   +   G V+
Sbjct: 187 ESGTVFSWGWGRYGNLGDGESQDRYLPTRVVGL--EGIRMVSAECGWRHSAVVSEDGRVF 244

Query: 346 TWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFG 405
           T+G    G LGHGD  D+T+P  +++L+      V    R T     +G++YG+GW  FG
Sbjct: 245 TFGWSKYGQLGHGDHTDRTVPCQVAALRHTRISSVAGGWRHTMAADSSGNLYGWGWNKFG 304

Query: 406 SLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 464
            LG  D   SD+     +  +L    VS ++ G  HTV VT+ GR++ +G     QLGH
Sbjct: 305 QLGLGDS--SDRPSPVLVGGALAGQRVSLVTCGWRHTVAVTEGGRVYSWGRGVNGQLGH 361



 Score = 92.8 bits (229), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 74/249 (29%), Positives = 113/249 (45%), Gaps = 5/249 (2%)

Query: 115 QITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
           ++  G  HTL+++    +F+ G +  G LG G  T  C+S   +       V  V+    
Sbjct: 122 RVACGDTHTLVVAGEGELFTFGRNQNGQLGLG-HTNDCLSPQLVVALQGERVRSVACGSE 180

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
           H+    +SG VF+ G       G  ++ +  + P  V  L+G+       G   +  ++ 
Sbjct: 181 HSLAATESGTVFSWGWGRYGNLGDGES-QDRYLPTRVVGLEGIRMVSAECGWRHSAVVSE 239

Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
            G V T G + +GQLGHGD  DR  P  +A L     +  +A G  + +A   +G +Y +
Sbjct: 240 DGRVFTFGWSKYGQLGHGDHTDRTVPCQVAALRHT-RISSVAGGWRHTMAADSSGNLYGW 298

Query: 294 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 353
           G      LG G+  D   P  +      G  V  V+ G  H VA+   G VY+WG+G  G
Sbjct: 299 GWNKFGQLGLGDSSDRPSPVLVGG-ALAGQRVSLVTCGWRHTVAVTEGGRVYSWGRGVNG 357

Query: 354 ALGHGDEID 362
            LGHG E D
Sbjct: 358 QLGHGAEQD 366



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 56/159 (35%), Positives = 77/159 (48%), Gaps = 4/159 (2%)

Query: 325 VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSL-KSHLAVQVCAR 383
           V  VS G  H VA+ S G V +WG+G  G LGHG   +   P+ +S+L  + +   VC  
Sbjct: 15  VTAVSCGSSHSVAILSCGIVTSWGRGEDGQLGHGQADECLAPKAISTLTDAGIESVVCGA 74

Query: 384 KRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV 443
           +    V    G VY +GW  FG LG  D    + V  PR ++      V +++ G  HT+
Sbjct: 75  EYTIAVAPSRGQVYSWGWGDFGRLGHGD---CNDVFVPRPIEFFSGRPVHRVACGDTHTL 131

Query: 444 VVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQEME 482
           VV   G LF FG N+  QLG      CL P  +   + E
Sbjct: 132 VVAGEGELFTFGRNQNGQLGLGHTNDCLSPQLVVALQGE 170


>gi|168050967|ref|XP_001777928.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162670688|gb|EDQ57252.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 364

 Score =  152 bits (385), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 107/336 (31%), Positives = 168/336 (50%), Gaps = 10/336 (2%)

Query: 130 SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGD 189
           +V++ G    G LG G  +    + T ++      +V ++AS+ H AF+   G+V+T G 
Sbjct: 3   AVYALGRGDLGQLGIGDYSDH-PTPTSLSTLVGKDIVHIAASDYHTAFLTDEGEVYTTGS 61

Query: 190 NSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLG 249
           N +   G R     +  P  V AL       +  G   T  +T  G + + G + +GQLG
Sbjct: 62  NDAGQLGVRGMEEQVV-PIRVAALDTHMVTHIACGFKHTVAVTETGALASWGGDEYGQLG 120

Query: 250 --HGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH 307
              G+ +D   P+ +    ++    ++AAG  + LA+TG+G VYSFG GS+  LGHG   
Sbjct: 121 FDSGNIVDGVQPRIVKGSRDL-HFSRVAAGGYHTLALTGSGDVYSFGDGSSGALGHGNLD 179

Query: 308 DELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPE 367
               P  +++    G+ V +++ G+ H  AL   G V+TWG+G  G LGHG   +  LP 
Sbjct: 180 GCSTPSLVKSLW--GLGVTQIACGENHSAALTVDGKVFTWGRGKYGQLGHGSTQNIKLPV 237

Query: 368 PLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSL 427
            + +L  H  +Q+      T  +   G +  F W G G  G    G  + VL P+ +  L
Sbjct: 238 AVKALVDHDVIQIACGGDHTLAITSDGRL--FSW-GHGLWGQTGHGTKEDVLSPKQVHQL 294

Query: 428 RAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 463
               + Q+S G  HTVV+ DRG ++G+GD E+ QLG
Sbjct: 295 EGRVLVQVSAGARHTVVLLDRGEVYGWGDCEQRQLG 330



 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 92/272 (33%), Positives = 130/272 (47%), Gaps = 8/272 (2%)

Query: 207 PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 266
           P  +  L G     + A    T FLT  G V+T GSN  GQLG     ++  P  +A L+
Sbjct: 26  PTSLSTLVGKDIVHIAASDYHTAFLTDEGEVYTTGSNDAGQLGVRGMEEQVVPIRVAALD 85

Query: 267 EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLG--HGEQHDELQPRAIQTFRRKGIH 324
               V  IA G  + +AVT  G + S+G      LG   G   D +QPR ++  R   +H
Sbjct: 86  -THMVTHIACGFKHTVAVTETGALASWGGDEYGQLGFDSGNIVDGVQPRIVKGSRD--LH 142

Query: 325 VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARK 384
             RV+AG  H +AL  SG VY++G G  GALGHG+    + P  + SL      Q+   +
Sbjct: 143 FSRVAAGGYHTLALTGSGDVYSFGDGSSGALGHGNLDGCSTPSLVKSLWGLGVTQIACGE 202

Query: 385 RKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV 444
             +  L   G V+ +G   +G LG    G +  +  P  + +L  H V QI+ G  HT+ 
Sbjct: 203 NHSAALTVDGKVFTWGRGKYGQLG---HGSTQNIKLPVAVKALVDHDVIQIACGGDHTLA 259

Query: 445 VTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 476
           +T  GRLF +G     Q GH T    L P ++
Sbjct: 260 ITSDGRLFSWGHGLWGQTGHGTKEDVLSPKQV 291



 Score =  119 bits (297), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 92/301 (30%), Positives = 146/301 (48%), Gaps = 6/301 (1%)

Query: 114 MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           + I    YHT  +++   V++ GS+  G LG      Q V   R+       V  ++   
Sbjct: 38  VHIAASDYHTAFLTDEGEVYTTGSNDAGQLGVRGMEEQVVPI-RVAALDTHMVTHIACGF 96

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTN-RPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
            H   V ++G + + G +     G    N     +PR+V+  + +   +V AG   T  L
Sbjct: 97  KHTVAVTETGALASWGGDEYGQLGFDSGNIVDGVQPRIVKGSRDLHFSRVAAGGYHTLAL 156

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
           T  G V++ G  + G LGHG+     TP  +  L  +G V QIA G ++  A+T +G V+
Sbjct: 157 TGSGDVYSFGDGSSGALGHGNLDGCSTPSLVKSLWGLG-VTQIACGENHSAALTVDGKVF 215

Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 351
           ++G G    LGHG   +   P A++        V++++ G +H +A+ S G +++WG G 
Sbjct: 216 TWGRGKYGQLGHGSTQNIKLPVAVKALVDH--DVIQIACGGDHTLAITSDGRLFSWGHGL 273

Query: 352 CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 411
            G  GHG + D   P+ +  L+  + VQV A  R T VL+D G VYG+G      LG  D
Sbjct: 274 WGQTGHGTKEDVLSPKQVHQLEGRVLVQVSAGARHTVVLLDRGEVYGWGDCEQRQLGTCD 333

Query: 412 R 412
           R
Sbjct: 334 R 334



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 81/230 (35%), Positives = 116/230 (50%), Gaps = 14/230 (6%)

Query: 164 HVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTA 223
           H  +V+A   H   +  SG V++ GD SS   GH + +     P LV++L G+   Q+  
Sbjct: 142 HFSRVAAGGYHTLALTGSGDVYSFGDGSSGALGHGNLD-GCSTPSLVKSLWGLGVTQIAC 200

Query: 224 GLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
           G N +  LT+ G V T G   +GQLGHG T +   P ++  L +   V+QIA G  + LA
Sbjct: 201 GENHSAALTVDGKVFTWGRGKYGQLGHGSTQNIKLPVAVKALVDH-DVIQIACGGDHTLA 259

Query: 284 VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 343
           +T +G ++S+G G     GHG + D L P+  Q  + +G  +V+VSAG  H V L   G 
Sbjct: 260 ITSDGRLFSWGHGLWGQTGHGTKEDVLSPK--QVHQLEGRVLVQVSAGARHTVVLLDRGE 317

Query: 344 VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDT 393
           VY WG      LG  D  D        S   H+ V +C   R   VL++T
Sbjct: 318 VYGWGDCEQRQLGTCDRCD-------FSTYGHICVSLC---RCECVLMNT 357



 Score = 98.2 bits (243), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 60/187 (32%), Positives = 94/187 (50%), Gaps = 3/187 (1%)

Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 349
           VY+ G G    LG G+  D   P ++ T   K I  V ++A D H   L   G VYT G 
Sbjct: 4   VYALGRGDLGQLGIGDYSDHPTPTSLSTLVGKDI--VHIAASDYHTAFLTDEGEVYTTGS 61

Query: 350 GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGF 409
              G LG     ++ +P  +++L +H+   +    + T  + +TG++  +G   +G LGF
Sbjct: 62  NDAGQLGVRGMEEQVVPIRVAALDTHMVTHIACGFKHTVAVTETGALASWGGDEYGQLGF 121

Query: 410 PDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG 469
               + D V +PRI+   R  H S+++ G YHT+ +T  G ++ FGD     LGH  L G
Sbjct: 122 DSGNIVDGV-QPRIVKGSRDLHFSRVAAGGYHTLALTGSGDVYSFGDGSSGALGHGNLDG 180

Query: 470 CLEPTEI 476
           C  P+ +
Sbjct: 181 CSTPSLV 187



 Score = 50.8 bits (120), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 46/154 (29%), Positives = 64/154 (41%), Gaps = 15/154 (9%)

Query: 112 GNMQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAH------ 164
           G  QI  G  H+  ++ +  VF+ G    G LGHG       S   I  P A        
Sbjct: 194 GVTQIACGENHSAALTVDGKVFTWGRGKYGQLGHG-------STQNIKLPVAVKALVDHD 246

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V+Q++   +H   +   G++F+ G       GH  T   +  P+ V  L+G    QV+AG
Sbjct: 247 VIQIACGGDHTLAITSDGRLFSWGHGLWGQTGH-GTKEDVLSPKQVHQLEGRVLVQVSAG 305

Query: 225 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPT 258
              T  L  RG V+  G     QLG  D  D  T
Sbjct: 306 ARHTVVLLDRGEVYGWGDCEQRQLGTCDRCDFST 339


>gi|357163608|ref|XP_003579788.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like
           [Brachypodium distachyon]
          Length = 449

 Score =  152 bits (384), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 106/350 (30%), Positives = 168/350 (48%), Gaps = 8/350 (2%)

Query: 116 ITTGRYHTLLISNSSVF-SCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           ++ G  H++ +   +V  S G    G LGHG    + V      F +      +  +++ 
Sbjct: 26  VSAGASHSVALLEGNVLCSWGRGEDGQLGHGDAEDRLVPTVISGFDAPRITSVICGADHT 85

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 234
            A+  +  QV++ G       GH +++  +F P+ V AL+G+  KQ+  G +    +T+ 
Sbjct: 86  TAYSEEEQQVYSWGWGDFGRLGHGNSSD-VFTPQPVRALQGIKIKQMACGDSHCLAVTMG 144

Query: 235 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 294
           G V + G N +GQLG G T D   P+ I   E +  V  IAAG  +  AVT +G +Y +G
Sbjct: 145 GEVQSWGRNQNGQLGLGTTEDSLLPQKIQAFEGI-CVKMIAAGAEHTAAVTEDGDLYGWG 203

Query: 295 SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGA 354
            G    LG G+++D   P  +     +G  +V ++ G  H + + SSG +YT+G    G 
Sbjct: 204 WGRYGNLGLGDRNDRFVPEKVSLV--EGEKMVLIACGWRHTITVSSSGILYTYGWSKYGQ 261

Query: 355 LGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGV 414
           LGHGD  D   P  + +LK     Q+    R T  L   G +YG+GW  FG +G  D   
Sbjct: 262 LGHGDFEDHLFPHKVEALKDSSTSQISGGWRHTMALTSDGKLYGWGWNKFGQVGAGD--- 318

Query: 415 SDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 464
           S     P  +       V+Q++ G  HT+  T++  +F +G     QLGH
Sbjct: 319 SVDHCSPVQVMFPAEQKVAQVACGWRHTLAYTEKKNVFAWGRGTSGQLGH 368



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 103/320 (32%), Positives = 160/320 (50%), Gaps = 9/320 (2%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           VV VSA  +H+  +L+   + + G       GH D    +  P ++          V  G
Sbjct: 23  VVLVSAGASHSVALLEGNVLCSWGRGEDGQLGHGDAEDRLV-PTVISGFDAPRITSVICG 81

Query: 225 LNF-TGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
            +  T +      V++ G    G+LGHG++ D  TP+ +  L+ +  + Q+A G S+ LA
Sbjct: 82  ADHTTAYSEEEQQVYSWGWGDFGRLGHGNSSDVFTPQPVRALQGI-KIKQMACGDSHCLA 140

Query: 284 VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 343
           VT  G V S+G   N  LG G   D L P+ IQ F  +GI V  ++AG EH  A+   G 
Sbjct: 141 VTMGGEVQSWGRNQNGQLGLGTTEDSLLPQKIQAF--EGICVKMIAAGAEHTAAVTEDGD 198

Query: 344 VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 403
           +Y WG G  G LG GD  D+ +PE +S ++    V +    R T  +  +G +Y +GW  
Sbjct: 199 LYGWGWGRYGNLGLGDRNDRFVPEKVSLVEGEKMVLIACGWRHTITVSSSGILYTYGWSK 258

Query: 404 FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 463
           +G LG  D    +  L P  +++L+    SQIS G  HT+ +T  G+L+G+G N+  Q+G
Sbjct: 259 YGQLGHGDF---EDHLFPHKVEALKDSSTSQISGGWRHTMALTSDGKLYGWGWNKFGQVG 315

Query: 464 H-DTLRGCLEPTEIFIQEME 482
             D++  C     +F  E +
Sbjct: 316 AGDSVDHCSPVQVMFPAEQK 335



 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 72/253 (28%), Positives = 113/253 (44%), Gaps = 6/253 (2%)

Query: 115 QITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
           Q+  G  H L ++    V S G +  G LG G  T   +   +I       V  ++A   
Sbjct: 130 QMACGDSHCLAVTMGGEVQSWGRNQNGQLGLG-TTEDSLLPQKIQAFEGICVKMIAAGAE 188

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
           H A V + G ++  G       G  D N   F P  V  ++G     +  G   T  ++ 
Sbjct: 189 HTAAVTEDGDLYGWGWGRYGNLGLGDRNDR-FVPEKVSLVEGEKMVLIACGWRHTITVSS 247

Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
            G ++T G + +GQLGHGD  D   P  +  L++  S  QI+ G  + +A+T +G +Y +
Sbjct: 248 SGILYTYGWSKYGQLGHGDFEDHLFPHKVEALKD-SSTSQISGGWRHTMALTSDGKLYGW 306

Query: 294 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 353
           G      +G G+  D   P  +Q        V +V+ G  H +A      V+ WG+G  G
Sbjct: 307 GWNKFGQVGAGDSVDHCSP--VQVMFPAEQKVAQVACGWRHTLAYTEKKNVFAWGRGTSG 364

Query: 354 ALGHGDEIDKTLP 366
            LGHG+ +D+  P
Sbjct: 365 QLGHGEIVDRNKP 377



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 63/209 (30%), Positives = 97/209 (46%), Gaps = 6/209 (2%)

Query: 116 ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           I  G  HT  ++ +  ++  G    G LG G    + V   +++      +V ++    H
Sbjct: 183 IAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRNDRFVP-EKVSLVEGEKMVLIACGWRH 241

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 234
              V  SG ++T G +     GH D    +F P  VEALK     Q++ G   T  LT  
Sbjct: 242 TITVSSSGILYTYGWSKYGQLGHGDFEDHLF-PHKVEALKDSSTSQISGGWRHTMALTSD 300

Query: 235 GHVHTCGSNTHGQLGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
           G ++  G N  GQ+G GD++D  +P  +  P E+   V Q+A G  + LA T    V+++
Sbjct: 301 GKLYGWGWNKFGQVGAGDSVDHCSPVQVMFPAEQ--KVAQVACGWRHTLAYTEKKNVFAW 358

Query: 294 GSGSNFCLGHGEQHDELQPRAIQTFRRKG 322
           G G++  LGHGE  D  +P  I      G
Sbjct: 359 GRGTSGQLGHGEIVDRNKPLMIDAISPDG 387



 Score = 46.6 bits (109), Expect = 0.032,   Method: Compositional matrix adjust.
 Identities = 46/162 (28%), Positives = 64/162 (39%), Gaps = 15/162 (9%)

Query: 116 ITTGRYHTLLISNSSV-FSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVV------QV 168
           I  G  HT+ +S+S + ++ G S  G LGHG        F    FP     +      Q+
Sbjct: 235 IACGWRHTITVSSSGILYTYGWSKYGQLGHG-------DFEDHLFPHKVEALKDSSTSQI 287

Query: 169 SASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFT 228
           S    H   +   G+++  G N     G  D+      P  V         QV  G   T
Sbjct: 288 SGGWRHTMALTSDGKLYGWGWNKFGQVGAGDSVDHC-SPVQVMFPAEQKVAQVACGWRHT 346

Query: 229 GFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS 270
              T + +V   G  T GQLGHG+ +DR  P  I  +   GS
Sbjct: 347 LAYTEKKNVFAWGRGTSGQLGHGEIVDRNKPLMIDAISPDGS 388


>gi|195622006|gb|ACG32833.1| HECT domain and RCC1-like domain-containing protein 2 [Zea mays]
          Length = 353

 Score =  152 bits (383), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 102/300 (34%), Positives = 153/300 (51%), Gaps = 8/300 (2%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           VV VSA  +H+  +L    + + G       GH D    +  P ++          V  G
Sbjct: 15  VVLVSAGASHSVALLTGNVLCSWGRGEDGQLGHGDAEDRLV-PTVLSGFDAPAITSVICG 73

Query: 225 LNFT-GFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
            + T  +      V++ G    G+LGHG++ D  TP+ +  L+ +  + QIA G S+ LA
Sbjct: 74  ADHTTAYSEDELQVYSWGWGDFGRLGHGNSSDVFTPQPVKALQGL-KIKQIACGDSHCLA 132

Query: 284 VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 343
           VT  G V S+G   N  LG G   D L P+ IQ F    + V  ++AG EH  A+   G 
Sbjct: 133 VTMAGEVQSWGRNQNGQLGLGTTEDSLLPQKIQAFES--VCVKMIAAGAEHTAAVTEDGD 190

Query: 344 VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 403
           +Y WG G  G LG GD  D+ LPE +SS++    V V    R T  + D+G++Y +GW  
Sbjct: 191 LYGWGWGRYGNLGLGDRNDRLLPEKVSSVEGEKMVLVACGWRHTITVSDSGNLYTYGWSK 250

Query: 404 FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 463
           +G LG  D    +  L P  +++L+   +SQIS G  HT+ +T  G+L+G+G N+  Q+G
Sbjct: 251 YGQLGHGDF---EDHLVPHKVEALKDSTISQISGGWRHTMALTSEGKLYGWGWNKFGQVG 307



 Score =  139 bits (351), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 94/294 (31%), Positives = 149/294 (50%), Gaps = 5/294 (1%)

Query: 116 ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           ++ G  H++ L++ + + S G    G LGHG    + V      F + A    +  +++ 
Sbjct: 18  VSAGASHSVALLTGNVLCSWGRGEDGQLGHGDAEDRLVPTVLSGFDAPAITSVICGADHT 77

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 234
            A+     QV++ G       GH +++  +F P+ V+AL+G+  KQ+  G +    +T+ 
Sbjct: 78  TAYSEDELQVYSWGWGDFGRLGHGNSSD-VFTPQPVKALQGLKIKQIACGDSHCLAVTMA 136

Query: 235 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 294
           G V + G N +GQLG G T D   P+ I   E V  V  IAAG  +  AVT +G +Y +G
Sbjct: 137 GEVQSWGRNQNGQLGLGTTEDSLLPQKIQAFESV-CVKMIAAGAEHTAAVTEDGDLYGWG 195

Query: 295 SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGA 354
            G    LG G+++D L P  + +   +G  +V V+ G  H + +  SG +YT+G    G 
Sbjct: 196 WGRYGNLGLGDRNDRLLPEKVSSV--EGEKMVLVACGWRHTITVSDSGNLYTYGWSKYGQ 253

Query: 355 LGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLG 408
           LGHGD  D  +P  + +LK     Q+    R T  L   G +YG+GW  FG +G
Sbjct: 254 LGHGDFEDHLVPHKVEALKDSTISQISGGWRHTMALTSEGKLYGWGWNKFGQVG 307



 Score =  122 bits (305), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 75/257 (29%), Positives = 132/257 (51%), Gaps = 7/257 (2%)

Query: 221 VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 280
           V+AG + +  L     + + G    GQLGHGD  DR  P  ++  +   ++  +  G  +
Sbjct: 18  VSAGASHSVALLTGNVLCSWGRGEDGQLGHGDAEDRLVPTVLSGFD-APAITSVICGADH 76

Query: 281 MLAVTGNGV-VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 339
             A + + + VYS+G G    LGHG   D   P+ ++    +G+ + +++ GD H +A+ 
Sbjct: 77  TTAYSEDELQVYSWGWGDFGRLGHGNSSDVFTPQPVKAL--QGLKIKQIACGDSHCLAVT 134

Query: 340 SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGF 399
            +G V +WG+   G LG G   D  LP+ + + +S     + A    T  + + G +YG+
Sbjct: 135 MAGEVQSWGRNQNGQLGLGTTEDSLLPQKIQAFESVCVKMIAAGAEHTAAVTEDGDLYGW 194

Query: 400 GWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNER 459
           GW  +G+LG  DR  +D++L P  + S+    +  ++ G  HT+ V+D G L+ +G ++ 
Sbjct: 195 GWGRYGNLGLGDR--NDRLL-PEKVSSVEGEKMVLVACGWRHTITVSDSGNLYTYGWSKY 251

Query: 460 AQLGHDTLRGCLEPTEI 476
            QLGH      L P ++
Sbjct: 252 GQLGHGDFEDHLVPHKV 268



 Score = 50.1 bits (118), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 40/149 (26%), Positives = 65/149 (43%), Gaps = 3/149 (2%)

Query: 116 ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           I  G  HT  ++ +  ++  G    G LG G    + +   +++      +V V+    H
Sbjct: 175 IAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRNDRLLP-EKVSSVEGEKMVLVACGWRH 233

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 234
              V  SG ++T G +     GH D    +  P  VEALK     Q++ G   T  LT  
Sbjct: 234 TITVSDSGNLYTYGWSKYGQLGHGDFEDHLV-PHKVEALKDSTISQISGGWRHTMALTSE 292

Query: 235 GHVHTCGSNTHGQLGHGDTLDRPTPKSIA 263
           G ++  G N  GQ+G G+  D  +P  ++
Sbjct: 293 GKLYGWGWNKFGQVGVGNNDDHSSPGQVS 321


>gi|383852591|ref|XP_003701810.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like
           [Megachile rotundata]
          Length = 1135

 Score =  151 bits (382), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 109/353 (30%), Positives = 181/353 (51%), Gaps = 15/353 (4%)

Query: 126 ISNSSVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSASENHAAFVLQSGQV 184
           +++ ++F  GS++ G LG G    + +   R ++F  A  + Q++  EN+   + + GQV
Sbjct: 73  VTDKNMFCWGSTIHGELGLGGIEDENILVPRELDFQKATEIEQIACGENYTVLITRDGQV 132

Query: 185 FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNT 244
           ++CG+N     GH    +   R +L+  L     K+V  G + T  +   G + + GSN 
Sbjct: 133 YSCGNNDYGQLGHEKGRK---RLQLIPGLDAFVFKKVACGAHHTLAVNEWGQLFSWGSNA 189

Query: 245 HGQLG-HGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH 303
            GQLG +   L    P  +  L     VVQ+A G +++LA+T NG +YS+GS S+  LG 
Sbjct: 190 EGQLGLNSKNLIECVPHMVRALG-TSVVVQVACGINHVLALTNNGKLYSWGSNSDGQLGL 248

Query: 304 G-EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEID 362
           G +  +E++P+ I +    G+ +  ++ G  H +A+  SG V+ WGK   G LG  D  +
Sbjct: 249 GTDVKNEIKPKLISSL--AGVPIAFITCGGYHSMAISKSGAVFGWGKNTFGQLGLNDTRN 306

Query: 363 KTLPEPLSSLK-SHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRP 421
           + LP  L +L+ + +    C  +   F+ VD G V+  G   +G LG    G +   + P
Sbjct: 307 RNLPRQLQTLQNAKVCYAACGEEFSVFLTVD-GGVFTCGAGMYGQLG---HGNTSNEILP 362

Query: 422 RILDSLRAHHVSQISTGLYHTV-VVTDRGRLFGFGDNERAQLGHDTLRGCLEP 473
           R +  L    V+QIS G  HT+ +V  RGR++ +G     QLG++  R    P
Sbjct: 363 RQVMELMGSTVTQISCGKRHTLGLVPSRGRVYAWGLGGAGQLGNNITRSVATP 415



 Score =  115 bits (287), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 99/317 (31%), Positives = 151/317 (47%), Gaps = 20/317 (6%)

Query: 115 QITTGRYHTLLIS-NSSVFSCGSSLCGVLGH--GPETTQCVSFTRINFPSAAHVV--QVS 169
           QI  G  +T+LI+ +  V+SCG++  G LGH  G +  Q +       P     V  +V+
Sbjct: 115 QIACGENYTVLITRDGQVYSCGNNDYGQLGHEKGRKRLQLI-------PGLDAFVFKKVA 167

Query: 170 ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
              +H   V + GQ+F+ G N+    G    N     P +V AL      QV  G+N   
Sbjct: 168 CGAHHTLAVNEWGQLFSWGSNAEGQLGLNSKNLIECVPHMVRALGTSVVVQVACGINHVL 227

Query: 230 FLTIRGHVHTCGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG 288
            LT  G +++ GSN+ GQLG G D  +   PK I+ L  V  +  I  G  + +A++ +G
Sbjct: 228 ALTNNGKLYSWGSNSDGQLGLGTDVKNEIKPKLISSLAGV-PIAFITCGGYHSMAISKSG 286

Query: 289 VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 348
            V+ +G  +   LG  +  +   PR +QT +     V   + G+E  V L   G V+T G
Sbjct: 287 AVFGWGKNTFGQLGLNDTRNRNLPRQLQTLQNA--KVCYAACGEEFSVFLTVDGGVFTCG 344

Query: 349 KGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDT-GSVYGFGWMGFGSL 407
            G  G LGHG+  ++ LP  +  L      Q+   KR T  LV + G VY +G  G G L
Sbjct: 345 AGMYGQLGHGNTSNEILPRQVMELMGSTVTQISCGKRHTLGLVPSRGRVYAWGLGGAGQL 404

Query: 408 GFPDRGVSDKVLRPRIL 424
           G     ++  V  P+++
Sbjct: 405 G---NNITRSVATPQVV 418


>gi|328784403|ref|XP_395217.4| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like [Apis
           mellifera]
          Length = 1081

 Score =  151 bits (381), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 111/352 (31%), Positives = 173/352 (49%), Gaps = 15/352 (4%)

Query: 127 SNSSVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSASENHAAFVLQSGQVF 185
               +F  GS++ G LG G    + +   R ++F  AA + Q++  EN+   + Q G+++
Sbjct: 24  KKKDMFCWGSTIHGELGLGGIEDENILIPRELDFKKAAEIQQIACGENYTVVITQIGEIY 83

Query: 186 TCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTH 245
           +CG+N     GH    +   R +L+  L     K+   G   T  +   G + + GSNT 
Sbjct: 84  SCGNNDYGQLGHEKGRK---RLQLIPGLDAFVFKKAACGAYHTLAINEWGQLFSWGSNTE 140

Query: 246 GQLG-HGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHG 304
           GQLG +       +P+ +  L     VVQIA G  +  A+T NG +YS+GS S   LG G
Sbjct: 141 GQLGLNSKNFMESSPRMVKTLG-TSVVVQIACGMKHAFALTNNGELYSWGSNSEGQLGLG 199

Query: 305 -EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK 363
            +   E++P+ I  F   GI +  ++ G  H +A+  SG V+ WGK   G LG  D  D+
Sbjct: 200 TDTKYEIKPKFISAFI--GIPIAFIACGGYHSIAISKSGAVFGWGKNTFGQLGLNDTQDR 257

Query: 364 TLPEPLSSLK-SHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPR 422
            LP  L +L+ + +    C  +   F+ VD G V+  G   +G LG    G +   + PR
Sbjct: 258 NLPCQLQTLQNAKICYAACGEEFSVFLTVD-GGVFTCGAGMYGQLG---HGSNSNEILPR 313

Query: 423 ILDSLRAHHVSQISTGLYHTV-VVTDRGRLFGFGDNERAQLGHDTLRGCLEP 473
            +  L    V+QIS G  HT+ +V  RGR++ +G     QLG+ + R    P
Sbjct: 314 QVMELMGSTVTQISCGKRHTLALVPSRGRVYAWGLGGAGQLGNHSTRSVTTP 365



 Score =  109 bits (272), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 93/307 (30%), Positives = 141/307 (45%), Gaps = 15/307 (4%)

Query: 108 ETSAGNMQITTGRYHTLLISN-SSVFSCGSSLCGVLGH--GPETTQCVS-FTRINFPSAA 163
           + +A   QI  G  +T++I+    ++SCG++  G LGH  G +  Q +       F  AA
Sbjct: 58  KKAAEIQQIACGENYTVVITQIGEIYSCGNNDYGQLGHEKGRKRLQLIPGLDAFVFKKAA 117

Query: 164 HVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTA 223
                     H   + + GQ+F+ G N+    G    N     PR+V+ L      Q+  
Sbjct: 118 ------CGAYHTLAINEWGQLFSWGSNTEGQLGLNSKNFMESSPRMVKTLGTSVVVQIAC 171

Query: 224 GLNFTGFLTIRGHVHTCGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 282
           G+     LT  G +++ GSN+ GQLG G DT     PK I+    +  +  IA G  + +
Sbjct: 172 GMKHAFALTNNGELYSWGSNSEGQLGLGTDTKYEIKPKFISAFIGI-PIAFIACGGYHSI 230

Query: 283 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
           A++ +G V+ +G  +   LG  +  D   P  +QT +   I     + G+E  V L   G
Sbjct: 231 AISKSGAVFGWGKNTFGQLGLNDTQDRNLPCQLQTLQNAKI--CYAACGEEFSVFLTVDG 288

Query: 343 YVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDT-GSVYGFGW 401
            V+T G G  G LGHG   ++ LP  +  L      Q+   KR T  LV + G VY +G 
Sbjct: 289 GVFTCGAGMYGQLGHGSNSNEILPRQVMELMGSTVTQISCGKRHTLALVPSRGRVYAWGL 348

Query: 402 MGFGSLG 408
            G G LG
Sbjct: 349 GGAGQLG 355



 Score =  105 bits (262), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 78/251 (31%), Positives = 118/251 (47%), Gaps = 5/251 (1%)

Query: 119 GRYHTLLISN-SSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAF 177
           G YHTL I+    +FS GS+  G LG   +     S   +     + VVQ++    HA  
Sbjct: 119 GAYHTLAINEWGQLFSWGSNTEGQLGLNSKNFMESSPRMVKTLGTSVVVQIACGMKHAFA 178

Query: 178 VLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHV 237
           +  +G++++ G NS    G     +   +P+ + A  G+P   +  G   +  ++  G V
Sbjct: 179 LTNNGELYSWGSNSEGQLGLGTDTKYEIKPKFISAFIGIPIAFIACGGYHSIAISKSGAV 238

Query: 238 HTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 297
              G NT GQLG  DT DR  P  +  L+    +   A G  + + +T +G V++ G+G 
Sbjct: 239 FGWGKNTFGQLGLNDTQDRNLPCQLQTLQN-AKICYAACGEEFSVFLTVDGGVFTCGAGM 297

Query: 298 NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL-DSSGYVYTWGKGYCGALG 356
              LGHG   +E+ PR  Q     G  V ++S G  H +AL  S G VY WG G  G LG
Sbjct: 298 YGQLGHGSNSNEILPR--QVMELMGSTVTQISCGKRHTLALVPSRGRVYAWGLGGAGQLG 355

Query: 357 HGDEIDKTLPE 367
           +      T P+
Sbjct: 356 NHSTRSVTTPQ 366



 Score = 49.3 bits (116), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 44/149 (29%), Positives = 64/149 (42%), Gaps = 4/149 (2%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           I  G YH++ IS S +VF  G +  G LG      + +   ++     A +   +  E  
Sbjct: 222 IACGGYHSIAISKSGAVFGWGKNTFGQLGLNDTQDRNLP-CQLQTLQNAKICYAACGEEF 280

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFT-GFLTI 233
           + F+   G VFTCG       GH   +  I  PR V  L G    Q++ G   T   +  
Sbjct: 281 SVFLTVDGGVFTCGAGMYGQLGHGSNSNEIL-PRQVMELMGSTVTQISCGKRHTLALVPS 339

Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPTPKSI 262
           RG V+  G    GQLG+  T    TP+ +
Sbjct: 340 RGRVYAWGLGGAGQLGNHSTRSVTTPQVV 368


>gi|168052711|ref|XP_001778783.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162669789|gb|EDQ56369.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 461

 Score =  151 bits (381), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 111/353 (31%), Positives = 174/353 (49%), Gaps = 10/353 (2%)

Query: 114 MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           + ++ G  H++ L+S   V S G    G LGHG    +    T ++      +  V+   
Sbjct: 17  LALSAGASHSVALLSGDLVCSWGRGEDGQLGHGDAEERHFP-TIVSALDDCEISSVTCGA 75

Query: 173 NHAAFVLQSGQ-VFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
           +H   +  S + V++ G       GH +++  +F P+ ++ALKG+  KQ+  G +    +
Sbjct: 76  DHTTALSNSTKTVYSWGWGDFGRLGHGNSS-DLFIPQPIKALKGLEVKQIACGDSHCLAI 134

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
           T  G V   G N +GQLG G T D  TP  +   E V +V  +AAG  +  AVT NG +Y
Sbjct: 135 TTDGEVLGWGRNQNGQLGLGHTEDVLTPHKLTAFEGV-AVKMLAAGAEHTTAVTENGKLY 193

Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 351
            +G G    LG G++ D L P  +      G  +  V+ G  H + +  SG +YT+G   
Sbjct: 194 GWGWGRYGNLGLGDREDRLVPDQVAAV--AGELMKMVACGWRHTICVAESGNMYTFGWSK 251

Query: 352 CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 411
            G LGHGD  D  +P  + +LKS     +    R TF L   G +YG+GW  FG +G   
Sbjct: 252 YGQLGHGDFADHLIPHQVQALKSKKIQAITGGWRHTFALDSDGRLYGWGWNKFGQVGC-- 309

Query: 412 RGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 464
            G ++    P+++  L+   V+ +  G  HT+ +TDRG ++ +G     QLGH
Sbjct: 310 -GNTEDQSSPQLVKGLQDQVVTVVQCGWRHTLAMTDRGNVYSWGRGTSGQLGH 361



 Score =  146 bits (368), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 98/301 (32%), Positives = 154/301 (51%), Gaps = 8/301 (2%)

Query: 164 HVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTA 223
            V+ +SA  +H+  +L    V + G       GH D     F P +V AL       VT 
Sbjct: 15  QVLALSAGASHSVALLSGDLVCSWGRGEDGQLGHGDAEERHF-PTIVSALDDCEISSVTC 73

Query: 224 GLNFTGFLTIRGH-VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 282
           G + T  L+     V++ G    G+LGHG++ D   P+ I  L+ +  V QIA G S+ L
Sbjct: 74  GADHTTALSNSTKTVYSWGWGDFGRLGHGNSSDLFIPQPIKALKGL-EVKQIACGDSHCL 132

Query: 283 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
           A+T +G V  +G   N  LG G   D L P  +  F  +G+ V  ++AG EH  A+  +G
Sbjct: 133 AITTDGEVLGWGRNQNGQLGLGHTEDVLTPHKLTAF--EGVAVKMLAAGAEHTTAVTENG 190

Query: 343 YVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWM 402
            +Y WG G  G LG GD  D+ +P+ ++++   L   V    R T  + ++G++Y FGW 
Sbjct: 191 KLYGWGWGRYGNLGLGDREDRLVPDQVAAVAGELMKMVACGWRHTICVAESGNMYTFGWS 250

Query: 403 GFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQL 462
            +G LG  D   +D ++ P  + +L++  +  I+ G  HT  +   GRL+G+G N+  Q+
Sbjct: 251 KYGQLGHGD--FADHLI-PHQVQALKSKKIQAITGGWRHTFALDSDGRLYGWGWNKFGQV 307

Query: 463 G 463
           G
Sbjct: 308 G 308



 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 95/314 (30%), Positives = 144/314 (45%), Gaps = 9/314 (2%)

Query: 116 ITTGRYHTLLISNSS--VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
           +T G  HT  +SNS+  V+S G    G LGHG  +   +    I       V Q++  ++
Sbjct: 71  VTCGADHTTALSNSTKTVYSWGWGDFGRLGHGNSSDLFIP-QPIKALKGLEVKQIACGDS 129

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
           H   +   G+V   G N +   G   T   +  P  + A +GV  K + AG   T  +T 
Sbjct: 130 HCLAITTDGEVLGWGRNQNGQLGLGHT-EDVLTPHKLTAFEGVAVKMLAAGAEHTTAVTE 188

Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ-IAAGPSYMLAVTGNGVVYS 292
            G ++  G   +G LG GD  DR  P  +A +   G +++ +A G  + + V  +G +Y+
Sbjct: 189 NGKLYGWGWGRYGNLGLGDREDRLVPDQVAAV--AGELMKMVACGWRHTICVAESGNMYT 246

Query: 293 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 352
           FG      LGHG+  D L P  +Q  + K I  +  + G  H  ALDS G +Y WG    
Sbjct: 247 FGWSKYGQLGHGDFADHLIPHQVQALKSKKIQAI--TGGWRHTFALDSDGRLYGWGWNKF 304

Query: 353 GALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDR 412
           G +G G+  D++ P+ +  L+  +   V    R T  + D G+VY +G    G LG  D 
Sbjct: 305 GQVGCGNTEDQSSPQLVKGLQDQVVTVVQCGWRHTLAMTDRGNVYSWGRGTSGQLGHGDT 364

Query: 413 GVSDKVLRPRILDS 426
                  R  IL S
Sbjct: 365 VDRSTPKRIEILSS 378



 Score =  114 bits (286), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 71/241 (29%), Positives = 119/241 (49%), Gaps = 7/241 (2%)

Query: 237 VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN-GVVYSFGS 295
           V + G    GQLGHGD  +R  P  ++ L++   +  +  G  +  A++ +   VYS+G 
Sbjct: 35  VCSWGRGEDGQLGHGDAEERHFPTIVSALDDC-EISSVTCGADHTTALSNSTKTVYSWGW 93

Query: 296 GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGAL 355
           G    LGHG   D   P+ I+    KG+ V +++ GD H +A+ + G V  WG+   G L
Sbjct: 94  GDFGRLGHGNSSDLFIPQPIKAL--KGLEVKQIACGDSHCLAITTDGEVLGWGRNQNGQL 151

Query: 356 GHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVS 415
           G G   D   P  L++ +      + A    T  + + G +YG+GW  +G+LG  DR   
Sbjct: 152 GLGHTEDVLTPHKLTAFEGVAVKMLAAGAEHTTAVTENGKLYGWGWGRYGNLGLGDR--- 208

Query: 416 DKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTE 475
           +  L P  + ++    +  ++ G  HT+ V + G ++ FG ++  QLGH      L P +
Sbjct: 209 EDRLVPDQVAAVAGELMKMVACGWRHTICVAESGNMYTFGWSKYGQLGHGDFADHLIPHQ 268

Query: 476 I 476
           +
Sbjct: 269 V 269



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 62/207 (29%), Positives = 99/207 (47%), Gaps = 6/207 (2%)

Query: 271 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 330
           V+ ++AG S+ +A+    +V S+G G +  LGHG+  +   P  +         +  V+ 
Sbjct: 16  VLALSAGASHSVALLSGDLVCSWGRGEDGQLGHGDAEERHFPTIVSAL--DDCEISSVTC 73

Query: 331 GDEHVVAL-DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFV 389
           G +H  AL +S+  VY+WG G  G LGHG+  D  +P+P+ +LK     Q+         
Sbjct: 74  GADHTTALSNSTKTVYSWGWGDFGRLGHGNSSDLFIPQPIKALKGLEVKQIACGDSHCLA 133

Query: 390 LVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRG 449
           +   G V G+G    G LG    G ++ VL P  L +     V  ++ G  HT  VT+ G
Sbjct: 134 ITTDGEVLGWGRNQNGQLGL---GHTEDVLTPHKLTAFEGVAVKMLAAGAEHTTAVTENG 190

Query: 450 RLFGFGDNERAQLGHDTLRGCLEPTEI 476
           +L+G+G      LG       L P ++
Sbjct: 191 KLYGWGWGRYGNLGLGDREDRLVPDQV 217



 Score = 78.2 bits (191), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 78/292 (26%), Positives = 129/292 (44%), Gaps = 9/292 (3%)

Query: 43  GGSHGLY-PQKFRSLVDLAASQLCALHSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSV- 100
           G S  L+ PQ  ++L  L   Q+    S    ++ + ++    R N N +  L   + V 
Sbjct: 102 GNSSDLFIPQPIKALKGLEVKQIACGDSHCLAITTDGEVLGWGR-NQNGQLGLGHTEDVL 160

Query: 101 -EHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINF 159
             H     E  A  M      + T +  N  ++  G    G LG G    + V   ++  
Sbjct: 161 TPHKLTAFEGVAVKMLAAGAEHTTAVTENGKLYGWGWGRYGNLGLGDREDRLVP-DQVAA 219

Query: 160 PSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCK 219
            +   +  V+    H   V +SG ++T G +     GH D    +  P  V+ALK    +
Sbjct: 220 VAGELMKMVACGWRHTICVAESGNMYTFGWSKYGQLGHGDFADHLI-PHQVQALKSKKIQ 278

Query: 220 QVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEE-VGSVVQIAAGP 278
            +T G   T  L   G ++  G N  GQ+G G+T D+ +P+ +  L++ V +VVQ   G 
Sbjct: 279 AITGGWRHTFALDSDGRLYGWGWNKFGQVGCGNTEDQSSPQLVKGLQDQVVTVVQ--CGW 336

Query: 279 SYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 330
            + LA+T  G VYS+G G++  LGHG+  D   P+ I+     G    ++ +
Sbjct: 337 RHTLAMTDRGNVYSWGRGTSGQLGHGDTVDRSTPKRIEILSSDGFACEQIES 388



 Score = 64.7 bits (156), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 56/192 (29%), Positives = 91/192 (47%), Gaps = 11/192 (5%)

Query: 105 DIVETSAGNMQ--ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPS 161
           D V   AG +   +  G  HT+ ++ S ++++ G S  G LGHG      +   ++    
Sbjct: 215 DQVAAVAGELMKMVACGWRHTICVAESGNMYTFGWSKYGQLGHGDFADHLIPH-QVQALK 273

Query: 162 AAHVVQVSASENHAAFVLQSGQVFTCGDNS--SFCCGHRDTNRPIFRPRLVEALKGVPCK 219
           +  +  ++    H   +   G+++  G N      CG+ +       P+LV+ L+     
Sbjct: 274 SKKIQAITGGWRHTFALDSDGRLYGWGWNKFGQVGCGNTEDQSS---PQLVKGLQDQVVT 330

Query: 220 QVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG-SVVQI-AAG 277
            V  G   T  +T RG+V++ G  T GQLGHGDT+DR TPK I  L   G +  QI ++G
Sbjct: 331 VVQCGWRHTLAMTDRGNVYSWGRGTSGQLGHGDTVDRSTPKRIEILSSDGFACEQIESSG 390

Query: 278 PSYMLAVTGNGV 289
            S   + T N +
Sbjct: 391 SSNCTSKTSNWI 402


>gi|297838521|ref|XP_002887142.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297332983|gb|EFH63401.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 542

 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 147/485 (30%), Positives = 209/485 (43%), Gaps = 44/485 (9%)

Query: 8   FSIEELPSHLIFEILTSGRLSAVDLAHLEL---------TSKTFGGSHGLYPQKFRSLVD 58
           F +   PS ++  +LT+  L   DLA LE          T   F       P    S+ +
Sbjct: 51  FFLASCPS-IVLHVLTTCDLGPRDLAKLEASDAQLSFMATCSFFRKPANFSPDFDLSISE 109

Query: 59  LAASQLCALHSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNMQITT 118
           +AA  +C   +I+  M    + E+  RC G+WK VL+FL + E      ++     Q   
Sbjct: 110 VAALDICQKRAIFKCMGEEERQEIKRRCGGSWKLVLKFLLAGEFGCRREKS-----QALA 164

Query: 119 GRYHTLLI-SNSSVFSCGSSLCGVLGHGP--ETTQCVSFTRINFPSAAHVVQVSASENHA 175
           G  H++ + S   V+S G +  G LG G   ++ Q +    +N      ++Q + S +  
Sbjct: 165 GPGHSIAVTSKGVVYSFGFNGSGQLGQGTTQDSWQPLPVRSLN---GIRIIQAAISTDRT 221

Query: 176 AFVLQSGQVFTCGDNSSFCCGHRDTNRP----IFRPRLVEALKGVPCKQVTAGLNFTGFL 231
             +  +G+V+  G     C        P    I  P+ V++L  +   Q   G  FT  L
Sbjct: 222 FVISDAGEVYAFG---KVCFSEAKLEVPETKLITTPQRVKSLAEIFVVQAAIGNYFTAIL 278

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV----TGN 287
           +  G V+T       +LGH        P+ +    E   VVQIAAG  Y+LA+    TG 
Sbjct: 279 SREGRVYTLSWGNDERLGHQTDHSCSLPQPLLGALENIPVVQIAAGFCYLLALAFQPTGM 338

Query: 288 GV--VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVY 345
            V  V     G            E  PR I+ F    I  V VSAG  H   +   G V 
Sbjct: 339 SVYSVGCGLGGKLGHGLSDSDASEKYPRLIKKFGLLNIEPVMVSAGPWHAAVVGKDGRVC 398

Query: 346 TWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFG 405
           TWG G  G LGHG E  +  P+ +  LK   AV V      TFV+ D G VY FG  G  
Sbjct: 399 TWGWGRFGCLGHGTEEAENAPKVVDGLKDVKAVHVATGVYTTFVVSDDGQVYSFG-SGGA 457

Query: 406 SLGFPDRGVSDKVLRPRILDSL-----RAHHVSQIST--GLYHTVVVTDRGRLFGFGDNE 458
           +LG  D  V +  L P+++ SL     R  HVS  ++  G  HT  +T+ G L+ FG   
Sbjct: 458 NLGQDD--VDENTLTPKLVSSLKDTKERMVHVSLTNSGNGTGHTFAMTESGTLYAFGAGN 515

Query: 459 RAQLG 463
           R QLG
Sbjct: 516 RGQLG 520



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 50/152 (32%), Positives = 74/152 (48%), Gaps = 9/152 (5%)

Query: 330 AGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFV 389
           AG  H +A+ S G VY++G    G LG G   D   P P+ SL     +Q      +TFV
Sbjct: 164 AGPGHSIAVTSKGVVYSFGFNGSGQLGQGTTQDSWQPLPVRSLNGIRIIQAAISTDRTFV 223

Query: 390 LVDTGSVYGFGWMGF--GSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTD 447
           + D G VY FG + F    L  P+  +   +  P+ + SL    V Q + G Y T +++ 
Sbjct: 224 ISDAGEVYAFGKVCFSEAKLEVPETKL---ITTPQRVKSLAEIFVVQAAIGNYFTAILSR 280

Query: 448 RGRLF--GFGDNERAQLGHDTLRGCLEPTEIF 477
            GR++   +G++ER  LGH T   C  P  + 
Sbjct: 281 EGRVYTLSWGNDER--LGHQTDHSCSLPQPLL 310



 Score = 59.7 bits (143), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 76/259 (29%), Positives = 112/259 (43%), Gaps = 19/259 (7%)

Query: 220 QVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPS 279
           Q  AG   +  +T +G V++ G N  GQLG G T D   P  +  L  +  ++Q A    
Sbjct: 161 QALAGPGHSIAVTSKGVVYSFGFNGSGQLGQGTTQDSWQPLPVRSLNGI-RIIQAAISTD 219

Query: 280 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRR----KGIHVVRVSAGDEHV 335
               ++  G VY+FG     C     + +  + + I T +R      I VV+ + G+   
Sbjct: 220 RTFVISDAGEVYAFG---KVCFSEA-KLEVPETKLITTPQRVKSLAEIFVVQAAIGNYFT 275

Query: 336 VALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPL-SSLKSHLAVQVCARKRKTFVLV--D 392
             L   G VYT   G    LGH  +   +LP+PL  +L++   VQ+ A       L    
Sbjct: 276 AILSREGRVYTLSWGNDERLGHQTDHSCSLPQPLLGALENIPVVQIAAGFCYLLALAFQP 335

Query: 393 TG-SVYGFGWMGFGSLGF--PDRGVSDKVLRPRILDSLRAHHVS--QISTGLYHTVVVTD 447
           TG SVY  G    G LG    D   S+K   PR++      ++    +S G +H  VV  
Sbjct: 336 TGMSVYSVGCGLGGKLGHGLSDSDASEKY--PRLIKKFGLLNIEPVMVSAGPWHAAVVGK 393

Query: 448 RGRLFGFGDNERAQLGHDT 466
            GR+  +G      LGH T
Sbjct: 394 DGRVCTWGWGRFGCLGHGT 412


>gi|380018521|ref|XP_003693176.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like [Apis
           florea]
          Length = 1081

 Score =  150 bits (379), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 111/352 (31%), Positives = 173/352 (49%), Gaps = 15/352 (4%)

Query: 127 SNSSVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSASENHAAFVLQSGQVF 185
               +F  GS++ G LG G    + +   R ++F  AA + Q++  EN+   + Q G+++
Sbjct: 24  KKKDMFCWGSTIHGELGLGGIEDENILIPRELDFKKAAEIQQIACGENYTVVITQIGEIY 83

Query: 186 TCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTH 245
           +CG+N     GH    +   R +L+  L     K+   G   T  +   G + + GSNT 
Sbjct: 84  SCGNNDYGQLGHEKGRK---RLQLIPGLDAFVFKKAACGAYHTLAINEWGQLFSWGSNTE 140

Query: 246 GQLG-HGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHG 304
           GQLG +       +P+ +  L     VVQIA G  +  A+T NG +YS+GS S   LG G
Sbjct: 141 GQLGLNSKNFMESSPRMVKTLG-TSVVVQIACGMKHAFALTNNGELYSWGSNSEGQLGLG 199

Query: 305 -EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK 363
            +   E++P+ I  F   GI +  ++ G  H +A+  SG V+ WGK   G LG  D  D+
Sbjct: 200 TDIKYEIKPKFISAFI--GIPIAFIACGGYHSIAISKSGAVFGWGKNTFGQLGLNDTQDR 257

Query: 364 TLPEPLSSLK-SHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPR 422
            LP  L +L+ + +    C  +   F+ VD G V+  G   +G LG    G +   + PR
Sbjct: 258 NLPCQLQTLQNAKICYAACGEEFSVFLTVD-GGVFTCGAGMYGQLG---HGSNSNEILPR 313

Query: 423 ILDSLRAHHVSQISTGLYHTV-VVTDRGRLFGFGDNERAQLGHDTLRGCLEP 473
            +  L    V+QIS G  HT+ +V  RGR++ +G     QLG+ + R    P
Sbjct: 314 QVMELMGSTVTQISCGKRHTLALVPSRGRVYAWGLGGAGQLGNHSTRSVTTP 365



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 92/307 (29%), Positives = 140/307 (45%), Gaps = 15/307 (4%)

Query: 108 ETSAGNMQITTGRYHTLLISN-SSVFSCGSSLCGVLGH--GPETTQCVS-FTRINFPSAA 163
           + +A   QI  G  +T++I+    ++SCG++  G LGH  G +  Q +       F  AA
Sbjct: 58  KKAAEIQQIACGENYTVVITQIGEIYSCGNNDYGQLGHEKGRKRLQLIPGLDAFVFKKAA 117

Query: 164 HVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTA 223
                     H   + + GQ+F+ G N+    G    N     PR+V+ L      Q+  
Sbjct: 118 ------CGAYHTLAINEWGQLFSWGSNTEGQLGLNSKNFMESSPRMVKTLGTSVVVQIAC 171

Query: 224 GLNFTGFLTIRGHVHTCGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 282
           G+     LT  G +++ GSN+ GQLG G D      PK I+    +  +  IA G  + +
Sbjct: 172 GMKHAFALTNNGELYSWGSNSEGQLGLGTDIKYEIKPKFISAFIGI-PIAFIACGGYHSI 230

Query: 283 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
           A++ +G V+ +G  +   LG  +  D   P  +QT +   I     + G+E  V L   G
Sbjct: 231 AISKSGAVFGWGKNTFGQLGLNDTQDRNLPCQLQTLQNAKI--CYAACGEEFSVFLTVDG 288

Query: 343 YVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDT-GSVYGFGW 401
            V+T G G  G LGHG   ++ LP  +  L      Q+   KR T  LV + G VY +G 
Sbjct: 289 GVFTCGAGMYGQLGHGSNSNEILPRQVMELMGSTVTQISCGKRHTLALVPSRGRVYAWGL 348

Query: 402 MGFGSLG 408
            G G LG
Sbjct: 349 GGAGQLG 355



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 78/251 (31%), Positives = 118/251 (47%), Gaps = 5/251 (1%)

Query: 119 GRYHTLLISN-SSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAF 177
           G YHTL I+    +FS GS+  G LG   +     S   +     + VVQ++    HA  
Sbjct: 119 GAYHTLAINEWGQLFSWGSNTEGQLGLNSKNFMESSPRMVKTLGTSVVVQIACGMKHAFA 178

Query: 178 VLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHV 237
           +  +G++++ G NS    G     +   +P+ + A  G+P   +  G   +  ++  G V
Sbjct: 179 LTNNGELYSWGSNSEGQLGLGTDIKYEIKPKFISAFIGIPIAFIACGGYHSIAISKSGAV 238

Query: 238 HTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 297
              G NT GQLG  DT DR  P  +  L+    +   A G  + + +T +G V++ G+G 
Sbjct: 239 FGWGKNTFGQLGLNDTQDRNLPCQLQTLQN-AKICYAACGEEFSVFLTVDGGVFTCGAGM 297

Query: 298 NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL-DSSGYVYTWGKGYCGALG 356
              LGHG   +E+ PR  Q     G  V ++S G  H +AL  S G VY WG G  G LG
Sbjct: 298 YGQLGHGSNSNEILPR--QVMELMGSTVTQISCGKRHTLALVPSRGRVYAWGLGGAGQLG 355

Query: 357 HGDEIDKTLPE 367
           +      T P+
Sbjct: 356 NHSTRSVTTPQ 366



 Score = 49.3 bits (116), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 44/149 (29%), Positives = 64/149 (42%), Gaps = 4/149 (2%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           I  G YH++ IS S +VF  G +  G LG      + +   ++     A +   +  E  
Sbjct: 222 IACGGYHSIAISKSGAVFGWGKNTFGQLGLNDTQDRNLP-CQLQTLQNAKICYAACGEEF 280

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFT-GFLTI 233
           + F+   G VFTCG       GH   +  I  PR V  L G    Q++ G   T   +  
Sbjct: 281 SVFLTVDGGVFTCGAGMYGQLGHGSNSNEIL-PRQVMELMGSTVTQISCGKRHTLALVPS 339

Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPTPKSI 262
           RG V+  G    GQLG+  T    TP+ +
Sbjct: 340 RGRVYAWGLGGAGQLGNHSTRSVTTPQVV 368


>gi|301106605|ref|XP_002902385.1| regulator of chromosome condensation (RCC1)-like protein
           [Phytophthora infestans T30-4]
 gi|262098259|gb|EEY56311.1| regulator of chromosome condensation (RCC1)-like protein
           [Phytophthora infestans T30-4]
          Length = 545

 Score =  150 bits (379), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 116/352 (32%), Positives = 177/352 (50%), Gaps = 13/352 (3%)

Query: 130 SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGD 189
           +V+S G    G LG G  + Q      I+  +   +VQ++    H   + + G+V+T G 
Sbjct: 2   TVYSWGRGEDGQLGLGDTSDQHRPVP-IDALAERRIVQIACGSGHTVVLTEEGEVYTWGR 60

Query: 190 NSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLG 249
                 GH D N   F PRLVE L+G   +QVT G   T  +T+ G ++T G   +G+LG
Sbjct: 61  GDDGRLGHGD-NGWKFVPRLVEELRGKNIRQVTCGSYHTAAVTVSGDLYTWGGGMYGKLG 119

Query: 250 HGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHG--EQH 307
           HG+     TP  +  L+ +  V Q+A G  + + +  N  VY++G   N   GHG  E H
Sbjct: 120 HGNETGHSTPYLVETLKSM-QVRQVACGSRHTVVLLENKDVYTWGDKENGVSGHGDTEGH 178

Query: 308 DELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPE 367
             L P  ++  R K I  V++SA   H  AL   G V+T+G+G  G LGH  E ++ +  
Sbjct: 179 QYL-PCPVEELRGKSI--VQISACGFHTAALSEFGEVFTFGEGKFGRLGHNSERNQPVAR 235

Query: 368 PLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSL 427
            + +L      QV      T  + +TG VY +G    G LG  D+ V+  V  P  ++SL
Sbjct: 236 FVDALAGKRVKQVACGGFHTAAVTETGEVYTWGGGEHGQLGHGDK-VNKTV--PTRVESL 292

Query: 428 RAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH-DTLRGCL-EPTEIF 477
               V QI+ G  HTV +TD G ++ +G+ +  +LGH DT +  L +P ++ 
Sbjct: 293 LEKLVLQITCGWSHTVTLTDTGEVYTWGNGDHGKLGHNDTAKVTLPKPVDVL 344



 Score =  129 bits (324), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 85/245 (34%), Positives = 126/245 (51%), Gaps = 7/245 (2%)

Query: 237 VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 296
           V++ G    GQLG GDT D+  P  I  L E   +VQIA G  + + +T  G VY++G G
Sbjct: 3   VYSWGRGEDGQLGLGDTSDQHRPVPIDALAER-RIVQIACGSGHTVVLTEEGEVYTWGRG 61

Query: 297 SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 356
            +  LGHG+   +  PR ++  R K I   +V+ G  H  A+  SG +YTWG G  G LG
Sbjct: 62  DDGRLGHGDNGWKFVPRLVEELRGKNIR--QVTCGSYHTAAVTVSGDLYTWGGGMYGKLG 119

Query: 357 HGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSD 416
           HG+E   + P  + +LKS    QV    R T VL++   VY +G    G  G  D     
Sbjct: 120 HGNETGHSTPYLVETLKSMQVRQVACGSRHTVVLLENKDVYTWGDKENGVSGHGD--TEG 177

Query: 417 KVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 476
               P  ++ LR   + QIS   +HT  +++ G +F FG+ +  +LGH++ R   +P   
Sbjct: 178 HQYLPCPVEELRGKSIVQISACGFHTAALSEFGEVFTFGEGKFGRLGHNSERN--QPVAR 235

Query: 477 FIQEM 481
           F+  +
Sbjct: 236 FVDAL 240


>gi|302799595|ref|XP_002981556.1| hypothetical protein SELMODRAFT_179009 [Selaginella moellendorffii]
 gi|300150722|gb|EFJ17371.1| hypothetical protein SELMODRAFT_179009 [Selaginella moellendorffii]
          Length = 430

 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 112/353 (31%), Positives = 174/353 (49%), Gaps = 13/353 (3%)

Query: 116 ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           ++ G  HT+ L+S   V S G    G LGHG    + +    I   +   +  V+   +H
Sbjct: 10  VSAGASHTVALLSGQVVCSFGRGEDGQLGHGDAEDRLLPRI-IGALNDCEISLVACGADH 68

Query: 175 A-AFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
             A+      +++ G       GH +++  +F P  ++AL+G+  +Q+  G +    +T 
Sbjct: 69  TTAYSATRLTIYSWGWGDFGRLGHGNSSD-LFVPHPIKALQGLEIRQIACGDSHCLAVTA 127

Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
            G V++ G N +GQLG GDT D   P  +   E V SV  +AAG  +  AVT +G +Y +
Sbjct: 128 DGEVYSWGRNQNGQLGLGDTDDSLVPHKLLAFEGV-SVKMLAAGAEHTAAVTDSGKLYGW 186

Query: 294 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 353
           G G    LG G++ D + P  +     +   +  V+ G  H +A+  SG +YT+G    G
Sbjct: 187 GWGRYGNLGLGDRGDRMLPAEVPAVGDE--KMCMVACGWRHTIAVSQSGKLYTYGWSKYG 244

Query: 354 ALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRG 413
            LGHGD  D  LP  +++L      QV    R T  L + G +YG+GW  FG +G  D  
Sbjct: 245 QLGHGDYADHLLPHQVAALAEFNITQVSGGWRHTVALTEAGKLYGWGWNKFGQVGSGD-- 302

Query: 414 VSDKVLRPRILDSLRAHH--VSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 464
             D    P+++ S+   H  V Q+S G  HTV VTD+  ++ +G     QLGH
Sbjct: 303 -VDDHTSPQLI-SIPGQHQRVVQVSCGWRHTVAVTDKNNVYSWGRGTSGQLGH 353



 Score =  125 bits (315), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 81/257 (31%), Positives = 132/257 (51%), Gaps = 7/257 (2%)

Query: 221 VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 280
           V+AG + T  L     V + G    GQLGHGD  DR  P+ I  L +   +  +A G  +
Sbjct: 10  VSAGASHTVALLSGQVVCSFGRGEDGQLGHGDAEDRLLPRIIGALNDC-EISLVACGADH 68

Query: 281 MLAVTGNGV-VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 339
             A +   + +YS+G G    LGHG   D   P  I+    +G+ + +++ GD H +A+ 
Sbjct: 69  TTAYSATRLTIYSWGWGDFGRLGHGNSSDLFVPHPIKAL--QGLEIRQIACGDSHCLAVT 126

Query: 340 SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGF 399
           + G VY+WG+   G LG GD  D  +P  L + +      + A    T  + D+G +YG+
Sbjct: 127 ADGEVYSWGRNQNGQLGLGDTDDSLVPHKLLAFEGVSVKMLAAGAEHTAAVTDSGKLYGW 186

Query: 400 GWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNER 459
           GW  +G+LG  DRG  D++L P  + ++    +  ++ G  HT+ V+  G+L+ +G ++ 
Sbjct: 187 GWGRYGNLGLGDRG--DRML-PAEVPAVGDEKMCMVACGWRHTIAVSQSGKLYTYGWSKY 243

Query: 460 AQLGHDTLRGCLEPTEI 476
            QLGH      L P ++
Sbjct: 244 GQLGHGDYADHLLPHQV 260



 Score =  114 bits (286), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 89/299 (29%), Positives = 138/299 (46%), Gaps = 8/299 (2%)

Query: 116 ITTGRYHTLLISNS--SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
           +  G  HT   S +  +++S G    G LGHG  +   V    I       + Q++  ++
Sbjct: 62  VACGADHTTAYSATRLTIYSWGWGDFGRLGHGNSSDLFVPHP-IKALQGLEIRQIACGDS 120

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
           H   V   G+V++ G N +   G  DT+  +  P  + A +GV  K + AG   T  +T 
Sbjct: 121 HCLAVTADGEVYSWGRNQNGQLGLGDTDDSLV-PHKLLAFEGVSVKMLAAGAEHTAAVTD 179

Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
            G ++  G   +G LG GD  DR  P  +  + +   +  +A G  + +AV+ +G +Y++
Sbjct: 180 SGKLYGWGWGRYGNLGLGDRGDRMLPAEVPAVGDE-KMCMVACGWRHTIAVSQSGKLYTY 238

Query: 294 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 353
           G      LGHG+  D L P  +        ++ +VS G  H VAL  +G +Y WG    G
Sbjct: 239 GWSKYGQLGHGDYADHLLPHQVAALAE--FNITQVSGGWRHTVALTEAGKLYGWGWNKFG 296

Query: 354 ALGHGDEIDKTLPEPLSSLKSHL-AVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 411
            +G GD  D T P+ +S    H   VQV    R T  + D  +VY +G    G LG  D
Sbjct: 297 QVGSGDVDDHTSPQLISIPGQHQRVVQVSCGWRHTVAVTDKNNVYSWGRGTSGQLGHGD 355



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 81/263 (30%), Positives = 125/263 (47%), Gaps = 9/263 (3%)

Query: 115 QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
           QI  G  H L + ++  V+S G +  G LG G      V    + F   + V  ++A   
Sbjct: 114 QIACGDSHCLAVTADGEVYSWGRNQNGQLGLGDTDDSLVPHKLLAFEGVS-VKMLAAGAE 172

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
           H A V  SG+++  G       G  D    +  P  V A+       V  G   T  ++ 
Sbjct: 173 HTAAVTDSGKLYGWGWGRYGNLGLGDRGDRML-PAEVPAVGDEKMCMVACGWRHTIAVSQ 231

Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
            G ++T G + +GQLGHGD  D   P  +A L E  ++ Q++ G  + +A+T  G +Y +
Sbjct: 232 SGKLYTYGWSKYGQLGHGDYADHLLPHQVAALAEF-NITQVSGGWRHTVALTEAGKLYGW 290

Query: 294 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIH--VVRVSAGDEHVVALDSSGYVYTWGKGY 351
           G      +G G+  D   P+ I      G H  VV+VS G  H VA+     VY+WG+G 
Sbjct: 291 GWNKFGQVGSGDVDDHTSPQLISI---PGQHQRVVQVSCGWRHTVAVTDKNNVYSWGRGT 347

Query: 352 CGALGHGDEIDKTLPEPLSSLKS 374
            G LGHGD +D++ P+ + +L +
Sbjct: 348 SGQLGHGDAVDRSAPKGIQALSA 370



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 62/208 (29%), Positives = 95/208 (45%), Gaps = 3/208 (1%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           +  G  HT  +++S  ++  G    G LG G    + +    +       +  V+    H
Sbjct: 167 LAAGAEHTAAVTDSGKLYGWGWGRYGNLGLGDRGDRMLP-AEVPAVGDEKMCMVACGWRH 225

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 234
              V QSG+++T G +     GH D    +  P  V AL      QV+ G   T  LT  
Sbjct: 226 TIAVSQSGKLYTYGWSKYGQLGHGDYADHLL-PHQVAALAEFNITQVSGGWRHTVALTEA 284

Query: 235 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 294
           G ++  G N  GQ+G GD  D  +P+ I+   +   VVQ++ G  + +AVT    VYS+G
Sbjct: 285 GKLYGWGWNKFGQVGSGDVDDHTSPQLISIPGQHQRVVQVSCGWRHTVAVTDKNNVYSWG 344

Query: 295 SGSNFCLGHGEQHDELQPRAIQTFRRKG 322
            G++  LGHG+  D   P+ IQ     G
Sbjct: 345 RGTSGQLGHGDAVDRSAPKGIQALSADG 372



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 51/157 (32%), Positives = 77/157 (49%), Gaps = 4/157 (2%)

Query: 325 VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKS-HLAVQVCAR 383
           V+ VSAG  H VAL S   V ++G+G  G LGHGD  D+ LP  + +L    +++  C  
Sbjct: 7   VLLVSAGASHTVALLSGQVVCSFGRGEDGQLGHGDAEDRLLPRIIGALNDCEISLVACGA 66

Query: 384 KRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV 443
              T       ++Y +GW  FG LG    G S  +  P  + +L+   + QI+ G  H +
Sbjct: 67  DHTTAYSATRLTIYSWGWGDFGRLG---HGNSSDLFVPHPIKALQGLEIRQIACGDSHCL 123

Query: 444 VVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQE 480
            VT  G ++ +G N+  QLG       L P ++   E
Sbjct: 124 AVTADGEVYSWGRNQNGQLGLGDTDDSLVPHKLLAFE 160



 Score = 65.5 bits (158), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 54/181 (29%), Positives = 86/181 (47%), Gaps = 13/181 (7%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           +  G  HT+ +S S  +++ G S  G LGHG      +   ++   +  ++ QVS    H
Sbjct: 219 VACGWRHTIAVSQSGKLYTYGWSKYGQLGHGDYADHLLPH-QVAALAEFNITQVSGGWRH 277

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCK-----QVTAGLNFTG 229
              + ++G+++  G N     G  D +     P+L+     +P +     QV+ G   T 
Sbjct: 278 TVALTEAGKLYGWGWNKFGQVGSGDVDDHT-SPQLIS----IPGQHQRVVQVSCGWRHTV 332

Query: 230 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 289
            +T + +V++ G  T GQLGHGD +DR  PK I  L   GS  +     S   AVTG+GV
Sbjct: 333 AVTDKNNVYSWGRGTSGQLGHGDAVDRSAPKGIQALSADGSACE-GLEKSPEPAVTGSGV 391

Query: 290 V 290
            
Sbjct: 392 A 392


>gi|356512860|ref|XP_003525133.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Glycine
           max]
          Length = 437

 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 109/313 (34%), Positives = 156/313 (49%), Gaps = 9/313 (2%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V+ VSA  +H+  +L    V + G       GH DT+  +F P  + AL G     VT G
Sbjct: 16  VLLVSAGASHSVALLSGNVVCSWGRGEDGQLGHGDTDDRLF-PTKLSALDGQDIICVTCG 74

Query: 225 LNFTGFLTIRGH-VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
            + T   +  G  V++ G    G+LGHGD  D   P  I  L+ +  + QIA G S+ LA
Sbjct: 75  ADHTMARSESGRDVYSWGWGDFGRLGHGDHSDLLIPHPIKALQGL-MIQQIACGDSHCLA 133

Query: 284 VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 343
           VT +  V S+G   N  LG G   D L P+ IQ F    I +  V+AG EH VA+   G 
Sbjct: 134 VTMDSQVLSWGRNQNGELGLGTAEDSLLPQKIQIFEE--IPIKMVAAGAEHSVAITKDGN 191

Query: 344 VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 403
           +Y WG G  G LG GD  D+ LPE ++     +A+  C   R T  +  +G +Y  GW  
Sbjct: 192 LYGWGWGRYGNLGLGDRNDRLLPEKVTVDGDKMAMVACGW-RHTICVSSSGGLYTNGWGK 250

Query: 404 FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 463
           +G LG  D    +  L PR + +L    +SQ+S G  H++ +T  G+L G+G N+  Q+G
Sbjct: 251 YGQLGHGDF---EDHLVPRKVQALSDKFISQVSGGWRHSMALTSSGQLLGWGWNKFGQIG 307

Query: 464 HDTLRGCLEPTEI 476
                 C  P ++
Sbjct: 308 VGNNFDCCSPMQV 320



 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 103/351 (29%), Positives = 172/351 (49%), Gaps = 11/351 (3%)

Query: 116 ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           ++ G  H++ L+S + V S G    G LGHG +T   +  T+++      ++ V+   +H
Sbjct: 19  VSAGASHSVALLSGNVVCSWGRGEDGQLGHG-DTDDRLFPTKLSALDGQDIICVTCGADH 77

Query: 175 AAFVLQSGQ-VFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
                +SG+ V++ G       GH D +  +  P  ++AL+G+  +Q+  G +    +T+
Sbjct: 78  TMARSESGRDVYSWGWGDFGRLGHGD-HSDLLIPHPIKALQGLMIQQIACGDSHCLAVTM 136

Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
              V + G N +G+LG G   D   P+ I   EE+  +  +AAG  + +A+T +G +Y +
Sbjct: 137 DSQVLSWGRNQNGELGLGTAEDSLLPQKIQIFEEI-PIKMVAAGAEHSVAITKDGNLYGW 195

Query: 294 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 353
           G G    LG G+++D L P  +      G  +  V+ G  H + + SSG +YT G G  G
Sbjct: 196 GWGRYGNLGLGDRNDRLLPEKVTV---DGDKMAMVACGWRHTICVSSSGGLYTNGWGKYG 252

Query: 354 ALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRG 413
            LGHGD  D  +P  + +L      QV    R +  L  +G + G+GW  FG +G    G
Sbjct: 253 QLGHGDFEDHLVPRKVQALSDKFISQVSGGWRHSMALTSSGQLLGWGWNKFGQIGV---G 309

Query: 414 VSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 464
            +     P  ++      V  IS G  HT+ VT+R  ++ +G     QLG+
Sbjct: 310 NNFDCCSPMQVNFPHDQKVQMISCGWRHTIAVTERENVYSWGRGANGQLGN 360



 Score = 91.7 bits (226), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 60/209 (28%), Positives = 98/209 (46%), Gaps = 6/209 (2%)

Query: 271 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 330
           V+ ++AG S+ +A+    VV S+G G +  LGHG+  D L P  +      G  ++ V+ 
Sbjct: 16  VLLVSAGASHSVALLSGNVVCSWGRGEDGQLGHGDTDDRLFPTKLSAL--DGQDIICVTC 73

Query: 331 GDEHVVALDSSGY-VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFV 389
           G +H +A   SG  VY+WG G  G LGHGD  D  +P P+ +L+  +  Q+         
Sbjct: 74  GADHTMARSESGRDVYSWGWGDFGRLGHGDHSDLLIPHPIKALQGLMIQQIACGDSHCLA 133

Query: 390 LVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRG 449
           +     V  +G    G LG    G ++  L P+ +       +  ++ G  H+V +T  G
Sbjct: 134 VTMDSQVLSWGRNQNGELGL---GTAEDSLLPQKIQIFEEIPIKMVAAGAEHSVAITKDG 190

Query: 450 RLFGFGDNERAQLGHDTLRGCLEPTEIFI 478
            L+G+G      LG       L P ++ +
Sbjct: 191 NLYGWGWGRYGNLGLGDRNDRLLPEKVTV 219



 Score = 88.2 bits (217), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 79/305 (25%), Positives = 124/305 (40%), Gaps = 60/305 (19%)

Query: 116 ITTGRYHTLLISNS--SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
           +T G  HT+  S S   V+S G    G LGHG  +   +    I       + Q++  ++
Sbjct: 71  VTCGADHTMARSESGRDVYSWGWGDFGRLGHGDHSDLLIPHP-IKALQGLMIQQIACGDS 129

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
           H   V    QV + G N +   G   T      P+ ++  + +P K V AG   +  +T 
Sbjct: 130 HCLAVTMDSQVLSWGRNQNGELG-LGTAEDSLLPQKIQIFEEIPIKMVAAGAEHSVAITK 188

Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
            G+++  G   +G LG GD  DR  P+ +    +   +  +A G  + + V+ +G +Y+ 
Sbjct: 189 DGNLYGWGWGRYGNLGLGDRNDRLLPEKVTV--DGDKMAMVACGWRHTICVSSSGGLYTN 246

Query: 294 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY---------- 343
           G G    LGHG+  D L PR +Q    K   + +VS G  H +AL SSG           
Sbjct: 247 GWGKYGQLGHGDFEDHLVPRKVQALSDK--FISQVSGGWRHSMALTSSGQLLGWGWNKFG 304

Query: 344 ------------------------------------------VYTWGKGYCGALGHGDEI 361
                                                     VY+WG+G  G LG+G+ I
Sbjct: 305 QIGVGNNFDCCSPMQVNFPHDQKVQMISCGWRHTIAVTERENVYSWGRGANGQLGNGETI 364

Query: 362 DKTLP 366
           D+ +P
Sbjct: 365 DRNVP 369



 Score = 63.2 bits (152), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 59/209 (28%), Positives = 93/209 (44%), Gaps = 7/209 (3%)

Query: 116 ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           +  G  H++ I+ + +++  G    G LG G    + +   ++       +  V+    H
Sbjct: 176 VAAGAEHSVAITKDGNLYGWGWGRYGNLGLGDRNDRLLP-EKVTV-DGDKMAMVACGWRH 233

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 234
              V  SG ++T G       GH D    +  PR V+AL      QV+ G   +  LT  
Sbjct: 234 TICVSSSGGLYTNGWGKYGQLGHGDFEDHLV-PRKVQALSDKFISQVSGGWRHSMALTSS 292

Query: 235 GHVHTCGSNTHGQLGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
           G +   G N  GQ+G G+  D  +P  +  P ++   V  I+ G  + +AVT    VYS+
Sbjct: 293 GQLLGWGWNKFGQIGVGNNFDCCSPMQVNFPHDQ--KVQMISCGWRHTIAVTERENVYSW 350

Query: 294 GSGSNFCLGHGEQHDELQPRAIQTFRRKG 322
           G G+N  LG+GE  D   P  I+ F   G
Sbjct: 351 GRGANGQLGNGETIDRNVPTIIEAFSVDG 379



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 45/159 (28%), Positives = 69/159 (43%), Gaps = 3/159 (1%)

Query: 116 ITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           +  G  HT+ +S+S  +++ G    G LGHG      V   ++   S   + QVS    H
Sbjct: 227 VACGWRHTICVSSSGGLYTNGWGKYGQLGHGDFEDHLVP-RKVQALSDKFISQVSGGWRH 285

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 234
           +  +  SGQ+   G N     G    N     P  V        + ++ G   T  +T R
Sbjct: 286 SMALTSSGQLLGWGWNKFGQIG-VGNNFDCCSPMQVNFPHDQKVQMISCGWRHTIAVTER 344

Query: 235 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
            +V++ G   +GQLG+G+T+DR  P  I      GS  Q
Sbjct: 345 ENVYSWGRGANGQLGNGETIDRNVPTIIEAFSVDGSSGQ 383


>gi|222623048|gb|EEE57180.1| hypothetical protein OsJ_07117 [Oryza sativa Japonica Group]
          Length = 463

 Score =  149 bits (377), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 114/369 (30%), Positives = 176/369 (47%), Gaps = 27/369 (7%)

Query: 116 ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRI----NFPSAAHVVQVSA 170
           I+ G  H++ L+S   V S G    G LGHG    + V         + P     V +  
Sbjct: 25  ISAGASHSVALLSGGVVCSWGRGEDGQLGHGDAEDRPVPTVLTAAFDDAPGGVASVVICG 84

Query: 171 SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
           +++  A+  +  Q+++ G       GH +++  +F P+ ++AL+GV   Q+  G +    
Sbjct: 85  ADHTTAYSDEELQLYSWGWGDFGRLGHGNSSD-VFNPQPIQALQGVRITQIACGDSHCLA 143

Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 290
           +T+ GHVH+ G N +GQLG G+T D   P+ I   E V  V  IAAG  +  AVT +G +
Sbjct: 144 VTVAGHVHSWGRNQNGQLGLGNTEDSLLPQKIQAFEGV-RVKMIAAGAEHTAAVTEDGDL 202

Query: 291 YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKG 350
           Y +G G    LG G++ D L P  + +    G  +V V+ G  H + + SSG +YT+G  
Sbjct: 203 YGWGWGRYGNLGLGDRDDRLIPEKVSSV--NGQKMVLVACGWRHTITVSSSGSIYTYGWS 260

Query: 351 YCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG---------------S 395
             G LGHGD  D  +P  L +LK     Q  A +   F L D G                
Sbjct: 261 KYGQLGHGDFEDHLVPHKLEALKDTTISQEEAVELIFFFLGDEGFRVGGGIQWALAADGK 320

Query: 396 VYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFG 455
           +YG+GW  FG +G  D   ++    P  ++      V Q++ G  HT+ +T+   +F +G
Sbjct: 321 LYGWGWNKFGQVGVGD---NEDHCSPVQVNFPNEQKVVQVACGWRHTLALTEAKNVFSWG 377

Query: 456 DNERAQLGH 464
                QLGH
Sbjct: 378 RGTSGQLGH 386



 Score =  134 bits (338), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 102/319 (31%), Positives = 152/319 (47%), Gaps = 27/319 (8%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDT-NRPI---FRPRLVEALKGVPCKQ 220
           VV +SA  +H+  +L  G V + G       GH D  +RP+         +A  GV    
Sbjct: 22  VVLISAGASHSVALLSGGVVCSWGRGEDGQLGHGDAEDRPVPTVLTAAFDDAPGGVASVV 81

Query: 221 VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 280
           +    + T +      +++ G    G+LGHG++ D   P+ I  L+ V  + QIA G S+
Sbjct: 82  ICGADHTTAYSDEELQLYSWGWGDFGRLGHGNSSDVFNPQPIQALQGV-RITQIACGDSH 140

Query: 281 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 340
            LAVT  G V+S+G   N  LG G   D L P+ IQ F  +G+ V  ++AG EH  A+  
Sbjct: 141 CLAVTVAGHVHSWGRNQNGQLGLGNTEDSLLPQKIQAF--EGVRVKMIAAGAEHTAAVTE 198

Query: 341 SGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 400
            G +Y WG G  G LG GD  D+ +PE +SS+     V V    R T  +  +GS+Y +G
Sbjct: 199 DGDLYGWGWGRYGNLGLGDRDDRLIPEKVSSVNGQKMVLVACGWRHTITVSSSGSIYTYG 258

Query: 401 WMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIST----------------GLYHTVV 444
           W  +G LG  D    +  L P  L++L+   +SQ                   G     +
Sbjct: 259 WSKYGQLGHGDF---EDHLVPHKLEALKDTTISQEEAVELIFFFLGDEGFRVGGGIQWAL 315

Query: 445 VTDRGRLFGFGDNERAQLG 463
             D G+L+G+G N+  Q+G
Sbjct: 316 AAD-GKLYGWGWNKFGQVG 333



 Score =  125 bits (314), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 81/273 (29%), Positives = 136/273 (49%), Gaps = 12/273 (4%)

Query: 211 EALKGVPCKQV---TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSI-APLE 266
           EA+   P + V   +AG + +  L   G V + G    GQLGHGD  DRP P  + A  +
Sbjct: 12  EAVPEAPERSVVLISAGASHSVALLSGGVVCSWGRGEDGQLGHGDAEDRPVPTVLTAAFD 71

Query: 267 EV--GSVVQIAAGPSYMLAVTGNGV-VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGI 323
           +   G    +  G  +  A +   + +YS+G G    LGHG   D   P+ IQ    +G+
Sbjct: 72  DAPGGVASVVICGADHTTAYSDEELQLYSWGWGDFGRLGHGNSSDVFNPQPIQAL--QGV 129

Query: 324 HVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCAR 383
            + +++ GD H +A+  +G+V++WG+   G LG G+  D  LP+ + + +      + A 
Sbjct: 130 RITQIACGDSHCLAVTVAGHVHSWGRNQNGQLGLGNTEDSLLPQKIQAFEGVRVKMIAAG 189

Query: 384 KRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV 443
              T  + + G +YG+GW  +G+LG  DR   D  L P  + S+    +  ++ G  HT+
Sbjct: 190 AEHTAAVTEDGDLYGWGWGRYGNLGLGDR---DDRLIPEKVSSVNGQKMVLVACGWRHTI 246

Query: 444 VVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 476
            V+  G ++ +G ++  QLGH      L P ++
Sbjct: 247 TVSSSGSIYTYGWSKYGQLGHGDFEDHLVPHKL 279



 Score =  101 bits (252), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 84/327 (25%), Positives = 148/327 (45%), Gaps = 21/327 (6%)

Query: 116 ITTGRYHTLLISNSSV--FSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
           +  G  HT   S+  +  +S G    G LGHG  ++   +   I       + Q++  ++
Sbjct: 81  VICGADHTTAYSDEELQLYSWGWGDFGRLGHG-NSSDVFNPQPIQALQGVRITQIACGDS 139

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
           H   V  +G V + G N +   G  +T   +  P+ ++A +GV  K + AG   T  +T 
Sbjct: 140 HCLAVTVAGHVHSWGRNQNGQLGLGNTEDSLL-PQKIQAFEGVRVKMIAAGAEHTAAVTE 198

Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
            G ++  G   +G LG GD  DR  P+ ++ +     +V +A G  + + V+ +G +Y++
Sbjct: 199 DGDLYGWGWGRYGNLGLGDRDDRLIPEKVSSVNGQ-KMVLVACGWRHTITVSSSGSIYTY 257

Query: 294 GSGSNFCLGHGEQHDELQPRAIQTFR------RKGIHVVRVSAGDEHV-------VALDS 340
           G      LGHG+  D L P  ++  +       + + ++    GDE          AL +
Sbjct: 258 GWSKYGQLGHGDFEDHLVPHKLEALKDTTISQEEAVELIFFFLGDEGFRVGGGIQWALAA 317

Query: 341 SGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 400
            G +Y WG    G +G GD  D   P  ++       VQV    R T  L +  +V+ +G
Sbjct: 318 DGKLYGWGWNKFGQVGVGDNEDHCSPVQVNFPNEQKVVQVACGWRHTLALTEAKNVFSWG 377

Query: 401 WMGFGSLGFPDRGVSDKVLRPRILDSL 427
               G LG  +  + D+ + P+++D+L
Sbjct: 378 RGTSGQLGHGE--IVDRNI-PKMIDAL 401



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 76/278 (27%), Positives = 124/278 (44%), Gaps = 25/278 (8%)

Query: 115 QITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
           QI  G  H L ++ +  V S G +  G LG G  T   +   +I       V  ++A   
Sbjct: 133 QIACGDSHCLAVTVAGHVHSWGRNQNGQLGLG-NTEDSLLPQKIQAFEGVRVKMIAAGAE 191

Query: 174 HAAFVLQSGQVFTCGDN--SSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
           H A V + G ++  G     +   G RD +R I  P  V ++ G     V  G   T  +
Sbjct: 192 HTAAVTEDGDLYGWGWGRYGNLGLGDRD-DRLI--PEKVSSVNGQKMVLVACGWRHTITV 248

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA--------------- 276
           +  G ++T G + +GQLGHGD  D   P  +  L++  ++ Q  A               
Sbjct: 249 SSSGSIYTYGWSKYGQLGHGDFEDHLVPHKLEALKDT-TISQEEAVELIFFFLGDEGFRV 307

Query: 277 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVV 336
           G     A+  +G +Y +G      +G G+  D   P  +     +   VV+V+ G  H +
Sbjct: 308 GGGIQWALAADGKLYGWGWNKFGQVGVGDNEDHCSPVQVNFPNEQ--KVVQVACGWRHTL 365

Query: 337 ALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKS 374
           AL  +  V++WG+G  G LGHG+ +D+ +P+ + +L S
Sbjct: 366 ALTEAKNVFSWGRGTSGQLGHGEIVDRNIPKMIDALSS 403



 Score = 64.3 bits (155), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 62/224 (27%), Positives = 94/224 (41%), Gaps = 21/224 (9%)

Query: 116 ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           I  G  HT  ++ +  ++  G    G LG G    + +   +++  +   +V V+    H
Sbjct: 186 IAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRDDRLIP-EKVSSVNGQKMVLVACGWRH 244

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTA----------- 223
              V  SG ++T G +     GH D    +  P  +EALK     Q  A           
Sbjct: 245 TITVSSSGSIYTYGWSKYGQLGHGDFEDHLV-PHKLEALKDTTISQEEAVELIFFFLGDE 303

Query: 224 ----GLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGP 278
               G      L   G ++  G N  GQ+G GD  D  +P  +  P E+   VVQ+A G 
Sbjct: 304 GFRVGGGIQWALAADGKLYGWGWNKFGQVGVGDNEDHCSPVQVNFPNEQ--KVVQVACGW 361

Query: 279 SYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKG 322
            + LA+T    V+S+G G++  LGHGE  D   P+ I      G
Sbjct: 362 RHTLALTEAKNVFSWGRGTSGQLGHGEIVDRNIPKMIDALSSDG 405



 Score = 47.4 bits (111), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 50/175 (28%), Positives = 72/175 (41%), Gaps = 20/175 (11%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHVV- 166
           +  G  HT+ +S+S S+++ G S  G LGHG       P   + +  T I+   A  ++ 
Sbjct: 238 VACGWRHTITVSSSGSIYTYGWSKYGQLGHGDFEDHLVPHKLEALKDTTISQEEAVELIF 297

Query: 167 --------QVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPC 218
                   +V      A  +   G+++  G N     G  D N     P  V        
Sbjct: 298 FFLGDEGFRVGGGIQWA--LAADGKLYGWGWNKFGQVGVGD-NEDHCSPVQVNFPNEQKV 354

Query: 219 KQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
            QV  G   T  LT   +V + G  T GQLGHG+ +DR  PK I  L   GS  +
Sbjct: 355 VQVACGWRHTLALTEAKNVFSWGRGTSGQLGHGEIVDRNIPKMIDALSSDGSACK 409


>gi|390336982|ref|XP_795107.3| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like
           [Strongylocentrotus purpuratus]
          Length = 1391

 Score =  149 bits (377), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 110/353 (31%), Positives = 171/353 (48%), Gaps = 14/353 (3%)

Query: 130 SVFSCGSSLCGVLG---HGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFT 186
           + F  GSS+ G LG    G +TTQ V+   +   S   V  +S  ++H   VL  G ++ 
Sbjct: 2   ATFCWGSSMEGQLGIGITGGQTTQEVA-KEVTTLSGQRVQSISCGKHHTGIVLDDGTLYM 60

Query: 187 CGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHG 246
           CG NS    G    +R  ++P  V AL+ V  K V  G + T  ++ RG V   G N  G
Sbjct: 61  CGANSK---GQLGQDRNQYKPVQVSALETVVIKHVACGDDHTLAVSDRGQVLGWGRNDRG 117

Query: 247 Q--LGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHG 304
           Q  L  GD  ++P P+ +  L      V++  G  + +A+T +G ++S+G  +   LG G
Sbjct: 118 QCGLATGDIENKPRPRILKHLASY-QFVKVCCGSLHSMALTRDGRLFSWGDNTYGQLGIG 176

Query: 305 EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKT 364
                   R  +    +G+ +VRV+ G  H  AL  SG V+ WGK   G LG G++ +K 
Sbjct: 177 TLVTNYTDRPTELTSLRGVPLVRVACGGFHSFALTISGSVFGWGKNDVGQLGLGNKENKA 236

Query: 365 LPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRIL 424
            P  L +++S +   +   +  T +L   G V+ FG    G LG    G +   + PR +
Sbjct: 237 YPTLLRNMRSQMVKHIACGQDHTAMLTADGGVFLFGQGSEGQLG---HGSNYNEVNPRKV 293

Query: 425 DSLRAHHVSQISTGLYHTVVVT-DRGRLFGFGDNERAQLGHDTLRGCLEPTEI 476
             L    ++Q++ G +HT+V+   +GRL+ FG     QLG D  R C  P  +
Sbjct: 294 IDLMGSDITQVTCGKHHTLVLEGSKGRLYAFGQGIHGQLGQDEARSCSNPQRV 346



 Score =  121 bits (304), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 107/396 (27%), Positives = 175/396 (44%), Gaps = 46/396 (11%)

Query: 115 QITTGRYHTLLISNSS--VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           Q+T G++HTL++  S   +++ G  + G LG   E   C +  R+  P   H    S++E
Sbjct: 303 QVTCGKHHTLVLEGSKGRLYAFGQGIHGQLGQD-EARSCSNPQRVPGPWVPH----SSTE 357

Query: 173 NHAAFVLQSGQVFTC---------------GDNSSFCCGHRDTNRPIF------------ 205
            +++     G+V  C                D+       RD +  IF            
Sbjct: 358 KNSS---SKGRVVRCIYAGGHHCFSTATNAADDIQIKLLFRDISTRIFFQLTXXXXXXXX 414

Query: 206 --RPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQ--LGHGDTLDRPTPKS 261
                    L+ V  K V  G + T  ++ R  V   G N  GQ  L  GD  ++P P+ 
Sbjct: 415 XXXXXXXXXLETVVIKHVACGDDHTLAVSDRVQVLGWGRNDRGQCGLATGDIENKPRPRI 474

Query: 262 IAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRK 321
           +  L      V++  G  + +A+T +G ++S+G  +   LG G        R  +    +
Sbjct: 475 LRHLASY-QFVKVCCGSLHSMALTRDGRLFSWGDNTYGQLGIGTLVTNYTDRPTELTSLR 533

Query: 322 GIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVC 381
           G+ +VRV+ G  H  AL  SG V+ WGK   G LG G++ +K+ P  L +++S +   + 
Sbjct: 534 GVPLVRVACGGFHSFALTISGSVFGWGKNDVGQLGLGNKENKSYPTLLRNMRSQMVKHIA 593

Query: 382 ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYH 441
             +  T +L   G V+ FG    G LG    G +   + PR +  L    ++Q++ G +H
Sbjct: 594 CGQDHTAMLTADGGVFLFGQGSEGQLG---HGSNYNEVNPRKVIDLMGSDITQVTCGKHH 650

Query: 442 TVVVT-DRGRLFGFGDNERAQLGHDTLRGCLEPTEI 476
           T+V+   +GRL+ FG     QLG D  R C  P  +
Sbjct: 651 TLVLEGSKGRLYAFGQGIHGQLGQDEARSCSNPQRV 686


>gi|302760205|ref|XP_002963525.1| hypothetical protein SELMODRAFT_438355 [Selaginella moellendorffii]
 gi|300168793|gb|EFJ35396.1| hypothetical protein SELMODRAFT_438355 [Selaginella moellendorffii]
          Length = 430

 Score =  149 bits (375), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 112/353 (31%), Positives = 173/353 (49%), Gaps = 13/353 (3%)

Query: 116 ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           ++ G  HT+ L+S   V S G    G LGHG    + +    I   +   +  V+   +H
Sbjct: 10  VSAGASHTVALLSGQVVCSFGRGEDGQLGHGDAEDRHLPRI-IGALNDCEISLVACGADH 68

Query: 175 A-AFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
             A+      +++ G       GH +++  +F P  ++AL+G+  +Q+  G +    +T 
Sbjct: 69  TTAYSATRLTIYSWGWGDFGRLGHGNSSD-LFVPHPIKALQGLEIRQIACGDSHCLAVTA 127

Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
            G V++ G N +GQLG GDT D   P  +   E V SV  +AAG  +  AVT  G +Y +
Sbjct: 128 DGEVYSWGRNQNGQLGLGDTDDSLVPHKLLAFEGV-SVKMLAAGAEHTAAVTDGGKLYGW 186

Query: 294 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 353
           G G    LG G++ D + P  +     +   +  V+ G  H +A+  SG +YT+G    G
Sbjct: 187 GWGRYGNLGLGDRGDRMLPAEVPAVGDE--KMCMVACGWRHTIAVSQSGKLYTYGWSKYG 244

Query: 354 ALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRG 413
            LGHGD  D  LP  +++L      QV    R T  L + G +YG+GW  FG +G  D  
Sbjct: 245 QLGHGDYADHLLPHQVAALAEFNITQVSGGWRHTVALTEAGKLYGWGWNKFGQVGSGD-- 302

Query: 414 VSDKVLRPRILDSLRAHH--VSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 464
             D    P+++ S+   H  V Q+S G  HTV VTD+  ++ +G     QLGH
Sbjct: 303 -VDDHTSPQLI-SIPGQHQRVVQVSCGWRHTVAVTDKNNVYSWGRGTSGQLGH 353



 Score =  124 bits (312), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 81/257 (31%), Positives = 131/257 (50%), Gaps = 7/257 (2%)

Query: 221 VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 280
           V+AG + T  L     V + G    GQLGHGD  DR  P+ I  L +   +  +A G  +
Sbjct: 10  VSAGASHTVALLSGQVVCSFGRGEDGQLGHGDAEDRHLPRIIGALNDC-EISLVACGADH 68

Query: 281 MLAVTGNGV-VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 339
             A +   + +YS+G G    LGHG   D   P  I+    +G+ + +++ GD H +A+ 
Sbjct: 69  TTAYSATRLTIYSWGWGDFGRLGHGNSSDLFVPHPIKAL--QGLEIRQIACGDSHCLAVT 126

Query: 340 SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGF 399
           + G VY+WG+   G LG GD  D  +P  L + +      + A    T  + D G +YG+
Sbjct: 127 ADGEVYSWGRNQNGQLGLGDTDDSLVPHKLLAFEGVSVKMLAAGAEHTAAVTDGGKLYGW 186

Query: 400 GWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNER 459
           GW  +G+LG  DRG  D++L P  + ++    +  ++ G  HT+ V+  G+L+ +G ++ 
Sbjct: 187 GWGRYGNLGLGDRG--DRML-PAEVPAVGDEKMCMVACGWRHTIAVSQSGKLYTYGWSKY 243

Query: 460 AQLGHDTLRGCLEPTEI 476
            QLGH      L P ++
Sbjct: 244 GQLGHGDYADHLLPHQV 260



 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 89/299 (29%), Positives = 138/299 (46%), Gaps = 8/299 (2%)

Query: 116 ITTGRYHTLLISNS--SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
           +  G  HT   S +  +++S G    G LGHG  +   V    I       + Q++  ++
Sbjct: 62  VACGADHTTAYSATRLTIYSWGWGDFGRLGHGNSSDLFVPHP-IKALQGLEIRQIACGDS 120

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
           H   V   G+V++ G N +   G  DT+  +  P  + A +GV  K + AG   T  +T 
Sbjct: 121 HCLAVTADGEVYSWGRNQNGQLGLGDTDDSLV-PHKLLAFEGVSVKMLAAGAEHTAAVTD 179

Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
            G ++  G   +G LG GD  DR  P  +  + +   +  +A G  + +AV+ +G +Y++
Sbjct: 180 GGKLYGWGWGRYGNLGLGDRGDRMLPAEVPAVGDE-KMCMVACGWRHTIAVSQSGKLYTY 238

Query: 294 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 353
           G      LGHG+  D L P  +        ++ +VS G  H VAL  +G +Y WG    G
Sbjct: 239 GWSKYGQLGHGDYADHLLPHQVAALAE--FNITQVSGGWRHTVALTEAGKLYGWGWNKFG 296

Query: 354 ALGHGDEIDKTLPEPLSSLKSHL-AVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 411
            +G GD  D T P+ +S    H   VQV    R T  + D  +VY +G    G LG  D
Sbjct: 297 QVGSGDVDDHTSPQLISIPGQHQRVVQVSCGWRHTVAVTDKNNVYSWGRGTSGQLGHGD 355



 Score =  105 bits (261), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 78/261 (29%), Positives = 124/261 (47%), Gaps = 5/261 (1%)

Query: 115 QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
           QI  G  H L + ++  V+S G +  G LG G      V    + F   + V  ++A   
Sbjct: 114 QIACGDSHCLAVTADGEVYSWGRNQNGQLGLGDTDDSLVPHKLLAFEGVS-VKMLAAGAE 172

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
           H A V   G+++  G       G  D    +  P  V A+       V  G   T  ++ 
Sbjct: 173 HTAAVTDGGKLYGWGWGRYGNLGLGDRGDRML-PAEVPAVGDEKMCMVACGWRHTIAVSQ 231

Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
            G ++T G + +GQLGHGD  D   P  +A L E  ++ Q++ G  + +A+T  G +Y +
Sbjct: 232 SGKLYTYGWSKYGQLGHGDYADHLLPHQVAALAEF-NITQVSGGWRHTVALTEAGKLYGW 290

Query: 294 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 353
           G      +G G+  D   P+ I +   +   VV+VS G  H VA+     VY+WG+G  G
Sbjct: 291 GWNKFGQVGSGDVDDHTSPQLI-SIPGQHQRVVQVSCGWRHTVAVTDKNNVYSWGRGTSG 349

Query: 354 ALGHGDEIDKTLPEPLSSLKS 374
            LGHGD +D++ P+ + +L +
Sbjct: 350 QLGHGDAVDRSAPKGIQALSA 370



 Score = 79.0 bits (193), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 61/208 (29%), Positives = 94/208 (45%), Gaps = 3/208 (1%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           +  G  HT  +++   ++  G    G LG G    + +    +       +  V+    H
Sbjct: 167 LAAGAEHTAAVTDGGKLYGWGWGRYGNLGLGDRGDRMLP-AEVPAVGDEKMCMVACGWRH 225

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 234
              V QSG+++T G +     GH D    +  P  V AL      QV+ G   T  LT  
Sbjct: 226 TIAVSQSGKLYTYGWSKYGQLGHGDYADHLL-PHQVAALAEFNITQVSGGWRHTVALTEA 284

Query: 235 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 294
           G ++  G N  GQ+G GD  D  +P+ I+   +   VVQ++ G  + +AVT    VYS+G
Sbjct: 285 GKLYGWGWNKFGQVGSGDVDDHTSPQLISIPGQHQRVVQVSCGWRHTVAVTDKNNVYSWG 344

Query: 295 SGSNFCLGHGEQHDELQPRAIQTFRRKG 322
            G++  LGHG+  D   P+ IQ     G
Sbjct: 345 RGTSGQLGHGDAVDRSAPKGIQALSADG 372



 Score = 76.6 bits (187), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 51/157 (32%), Positives = 77/157 (49%), Gaps = 4/157 (2%)

Query: 325 VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKS-HLAVQVCAR 383
           V+ VSAG  H VAL S   V ++G+G  G LGHGD  D+ LP  + +L    +++  C  
Sbjct: 7   VLLVSAGASHTVALLSGQVVCSFGRGEDGQLGHGDAEDRHLPRIIGALNDCEISLVACGA 66

Query: 384 KRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV 443
              T       ++Y +GW  FG LG    G S  +  P  + +L+   + QI+ G  H +
Sbjct: 67  DHTTAYSATRLTIYSWGWGDFGRLG---HGNSSDLFVPHPIKALQGLEIRQIACGDSHCL 123

Query: 444 VVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQE 480
            VT  G ++ +G N+  QLG       L P ++   E
Sbjct: 124 AVTADGEVYSWGRNQNGQLGLGDTDDSLVPHKLLAFE 160



 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 53/181 (29%), Positives = 85/181 (46%), Gaps = 13/181 (7%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           +  G  HT+ +S S  +++ G S  G LGHG      +   ++   +  ++ QVS    H
Sbjct: 219 VACGWRHTIAVSQSGKLYTYGWSKYGQLGHGDYADHLLPH-QVAALAEFNITQVSGGWRH 277

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCK-----QVTAGLNFTG 229
              + ++G+++  G N     G  D +     P+L+     +P +     QV+ G   T 
Sbjct: 278 TVALTEAGKLYGWGWNKFGQVGSGDVDDHT-SPQLIS----IPGQHQRVVQVSCGWRHTV 332

Query: 230 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 289
            +T + +V++ G  T GQLGHGD +DR  PK I  L   G   +     S   AVTG+GV
Sbjct: 333 AVTDKNNVYSWGRGTSGQLGHGDAVDRSAPKGIQALSADGKACE-GLEKSPEPAVTGSGV 391

Query: 290 V 290
            
Sbjct: 392 A 392


>gi|348687440|gb|EGZ27254.1| hypothetical protein PHYSODRAFT_358246 [Phytophthora sojae]
          Length = 545

 Score =  148 bits (373), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 114/353 (32%), Positives = 173/353 (49%), Gaps = 11/353 (3%)

Query: 130 SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGD 189
           +V+S G    G LG G  + Q      I+  +   +VQ++    H   +   G+V+T G 
Sbjct: 2   TVYSWGRGEDGQLGLGDTSDQHRPVP-IDALAERRIVQIACGSGHTVVLTDEGEVYTWGR 60

Query: 190 NSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLG 249
                 GH D N   F PRLVE L+G   +QVT G   T  +T+ G ++T G   +G+LG
Sbjct: 61  GDDGRLGHGD-NGWKFVPRLVEELRGKNIRQVTCGSYHTAAVTVSGDLYTWGGGMYGKLG 119

Query: 250 HGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHG--EQH 307
           HG+     TP  +  L+ +  V Q+A G  + + +  N  VY++G   N   GHG  E H
Sbjct: 120 HGNETGHSTPFLVETLKGM-QVRQVACGSRHTVVLLENKDVYTWGDKENGVSGHGDTEGH 178

Query: 308 DELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPE 367
             L P  ++  R K I  V++SA   H  AL   G V+T+G+G  G LGH  E ++ +  
Sbjct: 179 QYL-PCPVEELRGKNI--VQISACGFHTAALSEFGEVFTFGEGKFGRLGHNSERNQPVAR 235

Query: 368 PLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSL 427
            + +L      QV      T  + +TG VY +G    G LG  D+ V+  V  P  ++SL
Sbjct: 236 FVEALAGKRVKQVACGGFHTAAVTETGEVYTWGGGEHGQLGHGDK-VNKTV--PTRVESL 292

Query: 428 RAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQE 480
               V QI+ G  HTV +TD G ++ +G+ +  +LGH+       P  + + E
Sbjct: 293 VEKLVVQITCGWSHTVALTDTGEVYTWGNGDHGKLGHNDTTKVTLPKLVDVLE 345



 Score =  145 bits (365), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 112/338 (33%), Positives = 166/338 (49%), Gaps = 14/338 (4%)

Query: 114 MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +QI  G  HT+++++   V++ G    G LGHG    + V    +      ++ QV+   
Sbjct: 37  VQIACGSGHTVVLTDEGEVYTWGRGDDGRLGHGDNGWKFVP-RLVEELRGKNIRQVTCGS 95

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
            H A V  SG ++T G       GH  +T      P LVE LKG+  +QV  G   T  L
Sbjct: 96  YHTAAVTVSGDLYTWGGGMYGKLGHGNETGHST--PFLVETLKGMQVRQVACGSRHTVVL 153

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEV--GSVVQIAAGPSYMLAVTGNGV 289
                V+T G   +G  GHGDT          P+EE+   ++VQI+A   +  A++  G 
Sbjct: 154 LENKDVYTWGDKENGVSGHGDTEGHQYLP--CPVEELRGKNIVQISACGFHTAALSEFGE 211

Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 349
           V++FG G    LGH  + ++   R ++     G  V +V+ G  H  A+  +G VYTWG 
Sbjct: 212 VFTFGEGKFGRLGHNSERNQPVARFVEAL--AGKRVKQVACGGFHTAAVTETGEVYTWGG 269

Query: 350 GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGF 409
           G  G LGHGD+++KT+P  + SL   L VQ+      T  L DTG VY +G    G LG 
Sbjct: 270 GEHGQLGHGDKVNKTVPTRVESLVEKLVVQITCGWSHTVALTDTGEVYTWGNGDHGKLGH 329

Query: 410 PDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTD 447
            D   + KV  P+++D L    V  +++   HTV + D
Sbjct: 330 ND---TTKVTLPKLVDVLEGKRVISVASYNEHTVALVD 364



 Score =  129 bits (323), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 84/245 (34%), Positives = 127/245 (51%), Gaps = 7/245 (2%)

Query: 237 VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 296
           V++ G    GQLG GDT D+  P  I  L E   +VQIA G  + + +T  G VY++G G
Sbjct: 3   VYSWGRGEDGQLGLGDTSDQHRPVPIDALAER-RIVQIACGSGHTVVLTDEGEVYTWGRG 61

Query: 297 SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 356
            +  LGHG+   +  PR ++  R K I   +V+ G  H  A+  SG +YTWG G  G LG
Sbjct: 62  DDGRLGHGDNGWKFVPRLVEELRGKNIR--QVTCGSYHTAAVTVSGDLYTWGGGMYGKLG 119

Query: 357 HGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSD 416
           HG+E   + P  + +LK     QV    R T VL++   VY +G    G  G  D     
Sbjct: 120 HGNETGHSTPFLVETLKGMQVRQVACGSRHTVVLLENKDVYTWGDKENGVSGHGD--TEG 177

Query: 417 KVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 476
               P  ++ LR  ++ QIS   +HT  +++ G +F FG+ +  +LGH++ R   +P   
Sbjct: 178 HQYLPCPVEELRGKNIVQISACGFHTAALSEFGEVFTFGEGKFGRLGHNSERN--QPVAR 235

Query: 477 FIQEM 481
           F++ +
Sbjct: 236 FVEAL 240


>gi|384249755|gb|EIE23236.1| UVB-resistance 8 [Coccomyxa subellipsoidea C-169]
          Length = 434

 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 114/362 (31%), Positives = 163/362 (45%), Gaps = 8/362 (2%)

Query: 116 ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           ++ G  H+L L+SN    S G    G LGHG    +       +   A+     S +E  
Sbjct: 19  VSCGSSHSLALLSNGIALSWGRGEDGQLGHGDAEERKKPRAIFHLMQASCSAVCSGAEYS 78

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 234
            A      +V++ G       GH D N  +F P+ + AL G    +V  G   T  +T  
Sbjct: 79  VALSQPRNEVYSWGWGDFGRLGHGDCND-VFIPQPIRALAGRNIVKVACGDTHTLAVTDT 137

Query: 235 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 294
           G + + G N +GQLG G T D   P+ +  L     V  IA G  + LA T  G V+++G
Sbjct: 138 GELFSFGRNQNGQLGLGTTSDAILPQPVESLRGQ-EVTSIACGGEHSLAATSAGDVFAWG 196

Query: 295 SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGA 354
            G    LG G   D   P  +     +G+ V  V+ G  H +A D +G VYT+G    G 
Sbjct: 197 WGRYGNLGVGPPEDRHLPSQVHGL--EGVKVTSVACGWRHSIAADETGAVYTFGWSKYGQ 254

Query: 355 LGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGV 414
           LGHGD ID+ +P+ + SLK    V +    R T    D+G +Y +GW  FG LG    G 
Sbjct: 255 LGHGDCIDQLVPKAVESLKDSRIVLIAGGWRHTSAADDSGKLYSWGWNKFGQLGI---GS 311

Query: 415 SDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPT 474
           +     P  +  L    V  +S G  HT  VT+ G +F +G     QLGH+  +    P 
Sbjct: 312 NTDSNAPVPVQGLNTSPVKLLSCGWRHTFAVTEAGDVFSWGRGVNGQLGHNEPKDTNAPV 371

Query: 475 EI 476
            +
Sbjct: 372 RL 373



 Score =  105 bits (261), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 66/194 (34%), Positives = 98/194 (50%), Gaps = 6/194 (3%)

Query: 271 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 330
           V  ++ G S+ LA+  NG+  S+G G +  LGHG+  +  +PRAI  F         V +
Sbjct: 16  VTSVSCGSSHSLALLSNGIALSWGRGEDGQLGHGDAEERKKPRAI--FHLMQASCSAVCS 73

Query: 331 GDEHVVALDSS-GYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFV 389
           G E+ VAL      VY+WG G  G LGHGD  D  +P+P+ +L     V+V      T  
Sbjct: 74  GAEYSVALSQPRNEVYSWGWGDFGRLGHGDCNDVFIPQPIRALAGRNIVKVACGDTHTLA 133

Query: 390 LVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRG 449
           + DTG ++ FG    G LG    G +   + P+ ++SLR   V+ I+ G  H++  T  G
Sbjct: 134 VTDTGELFSFGRNQNGQLGL---GTTSDAILPQPVESLRGQEVTSIACGGEHSLAATSAG 190

Query: 450 RLFGFGDNERAQLG 463
            +F +G      LG
Sbjct: 191 DVFAWGWGRYGNLG 204



 Score = 92.0 bits (227), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 75/262 (28%), Positives = 119/262 (45%), Gaps = 10/262 (3%)

Query: 114 MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +++  G  HTL ++++  +FS G +  G LG G  T+  +    +       V  ++   
Sbjct: 122 VKVACGDTHTLAVTDTGELFSFGRNQNGQLGLG-TTSDAILPQPVESLRGQEVTSIACGG 180

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFR--PRLVEALKGVPCKQVTAGLNFTGF 230
            H+     +G VF  G       G+     P  R  P  V  L+GV    V  G   +  
Sbjct: 181 EHSLAATSAGDVFAWGWGR---YGNLGVGPPEDRHLPSQVHGLEGVKVTSVACGWRHSIA 237

Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 290
               G V+T G + +GQLGHGD +D+  PK++  L++   +V IA G  +  A   +G +
Sbjct: 238 ADETGAVYTFGWSKYGQLGHGDCIDQLVPKAVESLKD-SRIVLIAGGWRHTSAADDSGKL 296

Query: 291 YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKG 350
           YS+G      LG G   D   P  +Q      + ++  S G  H  A+  +G V++WG+G
Sbjct: 297 YSWGWNKFGQLGIGSNTDSNAPVPVQGLNTSPVKLL--SCGWRHTFAVTEAGDVFSWGRG 354

Query: 351 YCGALGHGDEIDKTLPEPLSSL 372
             G LGH +  D   P  L+ L
Sbjct: 355 VNGQLGHNEPKDTNAPVRLAEL 376



 Score = 89.0 bits (219), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 58/175 (33%), Positives = 84/175 (48%), Gaps = 6/175 (3%)

Query: 317 TFRR--KGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKS 374
           TFR     + V  VS G  H +AL S+G   +WG+G  G LGHGD  ++  P  +  L  
Sbjct: 6   TFRSAVSDLRVTSVSCGSSHSLALLSNGIALSWGRGEDGQLGHGDAEERKKPRAIFHLMQ 65

Query: 375 HLAVQVCARKRKTFVLVDT-GSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVS 433
                VC+    +  L      VY +GW  FG LG  D    + V  P+ + +L   ++ 
Sbjct: 66  ASCSAVCSGAEYSVALSQPRNEVYSWGWGDFGRLGHGD---CNDVFIPQPIRALAGRNIV 122

Query: 434 QISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQEMEEDTGLA 488
           +++ G  HT+ VTD G LF FG N+  QLG  T    + P  +     +E T +A
Sbjct: 123 KVACGDTHTLAVTDTGELFSFGRNQNGQLGLGTTSDAILPQPVESLRGQEVTSIA 177


>gi|255563857|ref|XP_002522929.1| uvb-resistance protein uvr8, putative [Ricinus communis]
 gi|223537856|gb|EEF39472.1| uvb-resistance protein uvr8, putative [Ricinus communis]
          Length = 437

 Score =  147 bits (370), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 110/353 (31%), Positives = 171/353 (48%), Gaps = 14/353 (3%)

Query: 116 ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           I+ G  H++ L+S + V + G    G LGHG +    +S T ++      ++ V    +H
Sbjct: 19  ISAGASHSVALLSGNVVCTWGRGEDGQLGHG-DAQDRLSPTILSTLEGLEIISVICGADH 77

Query: 175 A-AFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
             A+      V++ G       GH +++  +F P+ +  L G+  KQ+  G +    +T+
Sbjct: 78  TIAYSESHTDVYSWGWGDFGRLGHGNSS-DLFTPQPIRQLHGLKIKQIACGDSHCLAVTM 136

Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
            G V + G N +GQLG G T D   P+ I   + V  +  +AAG  +  AVT +G +Y +
Sbjct: 137 EGQVQSWGRNQNGQLGLGTTEDSLVPQKIQAFQGV-PIKMVAAGAEHTAAVTEDGELYGW 195

Query: 294 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 353
           G G    LG G++ D L P  +      G  +V V+ G  H +++ SSG +YT+G    G
Sbjct: 196 GWGRYGNLGLGDRKDRLVPEKVSL--PHGEKMVMVACGWRHTISVSSSGGLYTYGWSKYG 253

Query: 354 ALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRG 413
            LGHGD  D  +P  L +L+     Q+    R T  +   G +YG+GW  FG +     G
Sbjct: 254 QLGHGDYADHLIPHQLEALQGSFISQISGGWRHTMAVTSDGKLYGWGWNKFGQV-----G 308

Query: 414 VSDKVLR--PRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 464
           V D V R  P  +       V  IS G  HT+ VT+R  +F +G     QLG+
Sbjct: 309 VGDNVDRSSPVQVKLPLEQKVILISCGWRHTLAVTERQNVFSWGRGTNGQLGN 361



 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 75/257 (29%), Positives = 128/257 (49%), Gaps = 7/257 (2%)

Query: 221 VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 280
           ++AG + +  L     V T G    GQLGHGD  DR +P  ++ LE +  ++ +  G  +
Sbjct: 19  ISAGASHSVALLSGNVVCTWGRGEDGQLGHGDAQDRLSPTILSTLEGL-EIISVICGADH 77

Query: 281 MLAVTGNGV-VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 339
            +A + +   VYS+G G    LGHG   D   P+ I+     G+ + +++ GD H +A+ 
Sbjct: 78  TIAYSESHTDVYSWGWGDFGRLGHGNSSDLFTPQPIRQLH--GLKIKQIACGDSHCLAVT 135

Query: 340 SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGF 399
             G V +WG+   G LG G   D  +P+ + + +      V A    T  + + G +YG+
Sbjct: 136 MEGQVQSWGRNQNGQLGLGTTEDSLVPQKIQAFQGVPIKMVAAGAEHTAAVTEDGELYGW 195

Query: 400 GWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNER 459
           GW  +G+LG  DR   D+++ P  +       +  ++ G  HT+ V+  G L+ +G ++ 
Sbjct: 196 GWGRYGNLGLGDR--KDRLV-PEKVSLPHGEKMVMVACGWRHTISVSSSGGLYTYGWSKY 252

Query: 460 AQLGHDTLRGCLEPTEI 476
            QLGH      L P ++
Sbjct: 253 GQLGHGDYADHLIPHQL 269



 Score = 94.7 bits (234), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 62/214 (28%), Positives = 103/214 (48%), Gaps = 6/214 (2%)

Query: 271 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 330
           V+ I+AG S+ +A+    VV ++G G +  LGHG+  D L P  + T   +G+ ++ V  
Sbjct: 16  VLLISAGASHSVALLSGNVVCTWGRGEDGQLGHGDAQDRLSPTILSTL--EGLEIISVIC 73

Query: 331 GDEHVVAL-DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFV 389
           G +H +A  +S   VY+WG G  G LGHG+  D   P+P+  L      Q+         
Sbjct: 74  GADHTIAYSESHTDVYSWGWGDFGRLGHGNSSDLFTPQPIRQLHGLKIKQIACGDSHCLA 133

Query: 390 LVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRG 449
           +   G V  +G    G LG    G ++  L P+ + + +   +  ++ G  HT  VT+ G
Sbjct: 134 VTMEGQVQSWGRNQNGQLGL---GTTEDSLVPQKIQAFQGVPIKMVAAGAEHTAAVTEDG 190

Query: 450 RLFGFGDNERAQLGHDTLRGCLEPTEIFIQEMEE 483
            L+G+G      LG    +  L P ++ +   E+
Sbjct: 191 ELYGWGWGRYGNLGLGDRKDRLVPEKVSLPHGEK 224



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 78/313 (24%), Positives = 132/313 (42%), Gaps = 59/313 (18%)

Query: 114 MQITTGRYHTLLISNS--SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSAS 171
           + +  G  HT+  S S   V+S G    G LGHG  ++   +   I       + Q++  
Sbjct: 69  ISVICGADHTIAYSESHTDVYSWGWGDFGRLGHG-NSSDLFTPQPIRQLHGLKIKQIACG 127

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
           ++H   V   GQV + G N +   G   T   +  P+ ++A +GVP K V AG   T  +
Sbjct: 128 DSHCLAVTMEGQVQSWGRNQNGQLGLGTTEDSLV-PQKIQAFQGVPIKMVAAGAEHTAAV 186

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
           T  G ++  G   +G LG GD  DR  P+ ++ L     +V +A G  + ++V+ +G +Y
Sbjct: 187 TEDGELYGWGWGRYGNLGLGDRKDRLVPEKVS-LPHGEKMVMVACGWRHTISVSSSGGLY 245

Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVY------ 345
           ++G      LGHG+  D L P  ++    +G  + ++S G  H +A+ S G +Y      
Sbjct: 246 TYGWSKYGQLGHGDYADHLIPHQLEAL--QGSFISQISGGWRHTMAVTSDGKLYGWGWNK 303

Query: 346 ----------------------------------------------TWGKGYCGALGHGD 359
                                                         +WG+G  G LG+G+
Sbjct: 304 FGQVGVGDNVDRSSPVQVKLPLEQKVILISCGWRHTLAVTERQNVFSWGRGTNGQLGNGE 363

Query: 360 EIDKTLPEPLSSL 372
             D+ +P  + +L
Sbjct: 364 CTDRNVPVIIKAL 376



 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 64/209 (30%), Positives = 100/209 (47%), Gaps = 6/209 (2%)

Query: 116 ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           +  G  HT  ++ +  ++  G    G LG G    + V   +++ P    +V V+    H
Sbjct: 176 VAAGAEHTAAVTEDGELYGWGWGRYGNLGLGDRKDRLVP-EKVSLPHGEKMVMVACGWRH 234

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 234
              V  SG ++T G +     GH D    +  P  +EAL+G    Q++ G   T  +T  
Sbjct: 235 TISVSSSGGLYTYGWSKYGQLGHGDYADHLI-PHQLEALQGSFISQISGGWRHTMAVTSD 293

Query: 235 GHVHTCGSNTHGQLGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
           G ++  G N  GQ+G GD +DR +P  +  PLE+   V+ I+ G  + LAVT    V+S+
Sbjct: 294 GKLYGWGWNKFGQVGVGDNVDRSSPVQVKLPLEQ--KVILISCGWRHTLAVTERQNVFSW 351

Query: 294 GSGSNFCLGHGEQHDELQPRAIQTFRRKG 322
           G G+N  LG+GE  D   P  I+     G
Sbjct: 352 GRGTNGQLGNGECTDRNVPVIIKALSVDG 380



 Score = 47.8 bits (112), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 45/165 (27%), Positives = 74/165 (44%), Gaps = 11/165 (6%)

Query: 114 MQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           + +  G  HT+ +S+S  +++ G S  G LGHG      +   ++     + + Q+S   
Sbjct: 226 VMVACGWRHTISVSSSGGLYTYGWSKYGQLGHGDYADHLIPH-QLEALQGSFISQISGGW 284

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQ----VTAGLNFT 228
            H   V   G+++  G N     G  D    + R   V+    +P +Q    ++ G   T
Sbjct: 285 RHTMAVTSDGKLYGWGWNKFGQVGVGDN---VDRSSPVQVK--LPLEQKVILISCGWRHT 339

Query: 229 GFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
             +T R +V + G  T+GQLG+G+  DR  P  I  L   GS  Q
Sbjct: 340 LAVTERQNVFSWGRGTNGQLGNGECTDRNVPVIIKALSVDGSCGQ 384


>gi|242008674|ref|XP_002425127.1| hect E3 ubiquitin ligase, putative [Pediculus humanus corporis]
 gi|212508801|gb|EEB12389.1| hect E3 ubiquitin ligase, putative [Pediculus humanus corporis]
          Length = 1044

 Score =  146 bits (368), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 111/328 (33%), Positives = 165/328 (50%), Gaps = 15/328 (4%)

Query: 131 VFSCGSSLCGVLGHG-PETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGD 189
           ++  GS++ G LG G  E  Q  +     F  A++V QV+  ENH   + +SG+VF+CG+
Sbjct: 1   MYCWGSTVHGELGLGGIEHDQIFAPIEHTFKYASNVSQVTMGENHTVMLTKSGEVFSCGN 60

Query: 190 NSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLG 249
           N     GH+       +P  VE L      +++ G N T      G +   GS++HGQLG
Sbjct: 61  NDLDQLGHKKQRT---KPEKVEGLDFYRITKISCGGNHTLAFNEWGQLFGWGSDSHGQLG 117

Query: 250 HGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHD- 308
              T  +P PK I  L     +VQI+ G ++ LA+T NG +YS+G   +  LG G + + 
Sbjct: 118 FNGT-TQPLPKIIKSLATF-HIVQISCGKNHSLALTNNGELYSWGGNYDGQLGLGMRSEY 175

Query: 309 ELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEP 368
           E QP  I++    GI +  ++ G  H  AL  SG +Y WGK   G LG  DE +K  P  
Sbjct: 176 EKQPTLIKSLL--GIPIAFIACGSNHSFALSKSGAIYGWGKNTYGQLGLNDEENKLHPTQ 233

Query: 369 LSSLKS-HLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSL 427
           L +L+S  +    C      F+  D G V+  G   +G LG    G +   + PR +  L
Sbjct: 234 LKTLRSIRVKYIACGEDFSAFLSAD-GGVFTCGAGMYGQLG---HGSTSNEILPRKIMEL 289

Query: 428 RAHHVSQISTGLYHTV-VVTDRGRLFGF 454
               V+Q+S G  HT+ +V  RGR++ F
Sbjct: 290 MGSTVTQVSCGKRHTLALVPSRGRVYSF 317



 Score =  119 bits (298), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 86/288 (29%), Positives = 143/288 (49%), Gaps = 11/288 (3%)

Query: 115 QITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
           Q+T G  HT++++ S  VFSCG++    LGH  + T+      ++F     + ++S   N
Sbjct: 38  QVTMGENHTVMLTKSGEVFSCGNNDLDQLGHKKQRTKPEKVEGLDF---YRITKISCGGN 94

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
           H     + GQ+F  G +S    G   T +P+  P+++++L      Q++ G N +  LT 
Sbjct: 95  HTLAFNEWGQLFGWGSDSHGQLGFNGTTQPL--PKIIKSLATFHIVQISCGKNHSLALTN 152

Query: 234 RGHVHTCGSNTHGQLGHGDTLD-RPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
            G +++ G N  GQLG G   +    P  I  L  +  +  IA G ++  A++ +G +Y 
Sbjct: 153 NGELYSWGGNYDGQLGLGMRSEYEKQPTLIKSLLGI-PIAFIACGSNHSFALSKSGAIYG 211

Query: 293 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 352
           +G  +   LG  ++ ++L P  ++T R   I V  ++ G++    L + G V+T G G  
Sbjct: 212 WGKNTYGQLGLNDEENKLHPTQLKTLR--SIRVKYIACGEDFSAFLSADGGVFTCGAGMY 269

Query: 353 GALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDT-GSVYGF 399
           G LGHG   ++ LP  +  L      QV   KR T  LV + G VY F
Sbjct: 270 GQLGHGSTSNEILPRKIMELMGSTVTQVSCGKRHTLALVPSRGRVYSF 317



 Score = 88.2 bits (217), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 66/244 (27%), Positives = 116/244 (47%), Gaps = 14/244 (5%)

Query: 237 VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEV----GSVVQIAAGPSYMLAVTGNGVVYS 292
           ++  GS  HG+LG G        +  AP+E       +V Q+  G ++ + +T +G V+S
Sbjct: 1   MYCWGSTVHGELGLGGI---EHDQIFAPIEHTFKYASNVSQVTMGENHTVMLTKSGEVFS 57

Query: 293 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 352
            G+     LGH +Q  + +      F R    + ++S G  H +A +  G ++ WG    
Sbjct: 58  CGNNDLDQLGHKKQRTKPEKVEGLDFYR----ITKISCGGNHTLAFNEWGQLFGWGSDSH 113

Query: 353 GALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDR 412
           G LG  +   + LP+ + SL +   VQ+   K  +  L + G +Y +G    G LG   R
Sbjct: 114 GQLGF-NGTTQPLPKIIKSLATFHIVQISCGKNHSLALTNNGELYSWGGNYDGQLGLGMR 172

Query: 413 GVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLE 472
              +K  +P ++ SL    ++ I+ G  H+  ++  G ++G+G N   QLG +     L 
Sbjct: 173 SEYEK--QPTLIKSLLGIPIAFIACGSNHSFALSKSGAIYGWGKNTYGQLGLNDEENKLH 230

Query: 473 PTEI 476
           PT++
Sbjct: 231 PTQL 234


>gi|219125443|ref|XP_002182991.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
 gi|217405785|gb|EEC45727.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
          Length = 341

 Score =  144 bits (364), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 109/349 (31%), Positives = 168/349 (48%), Gaps = 11/349 (3%)

Query: 130 SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGD 189
           +VF+ G    G LG G +T+     T ++      V Q++    H   +   G+VFT G 
Sbjct: 1   AVFTWGRGEDGQLGLG-DTSDQDEPTYVDALRGVGVQQIACGSGHTVVLTTDGEVFTWGR 59

Query: 190 NSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLG 249
                 GH D N   + PR+ ++L G    QVT G   T  +T  G ++T G   +G+LG
Sbjct: 60  GDDGRLGHGD-NGWKYVPRMTQSLAGQIVLQVTCGSYHTAAVTGNGDLYTWGGGMYGKLG 118

Query: 250 HGDTLDRPTPKSIAPLEEVGS-VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGE-QH 307
           HGD     TPK +  L  VG+ V QIA G  +   VT +G +Y++G   N   GHGE + 
Sbjct: 119 HGDEAGHATPKRVEAL--VGATVAQIACGSRHTAIVTASGALYTWGDKENGVAGHGETEG 176

Query: 308 DELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPE 367
            +  PR +++   K   V ++SA   H   +  +G ++TWG+G  G LGH  E +   P 
Sbjct: 177 HQYLPRLLESMAAK--RVAQISACGFHTAIVTDAGELFTWGEGKFGRLGHMSERNCHSPT 234

Query: 368 PLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSL 427
            +  +      QV      T V+ + G +Y FG    G LG  DR      + P  +++L
Sbjct: 235 IVDYMVGKKPRQVSCGGFHTAVVSEDGRLYTFGGGEHGQLGHNDR---VNKMTPTFVEAL 291

Query: 428 RAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 476
               VSQI+ G  H+V +T +G ++ +G+ +  +LGH   R    P  +
Sbjct: 292 DGMFVSQITCGWSHSVALTVKGLVYTWGNGDHGKLGHGNGRKVAVPQAV 340



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 101/302 (33%), Positives = 152/302 (50%), Gaps = 14/302 (4%)

Query: 184 VFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 243
           VFT G       G  DT+     P  V+AL+GV  +Q+  G   T  LT  G V T G  
Sbjct: 2   VFTWGRGEDGQLGLGDTSDQD-EPTYVDALRGVGVQQIACGSGHTVVLTTDGEVFTWGRG 60

Query: 244 THGQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLAVTGNGVVYSFGSGSNFCLG 302
             G+LGHGD   +  P+    L   G +V Q+  G  +  AVTGNG +Y++G G    LG
Sbjct: 61  DDGRLGHGDNGWKYVPRMTQSL--AGQIVLQVTCGSYHTAAVTGNGDLYTWGGGMYGKLG 118

Query: 303 HGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGD-EI 361
           HG++     P+ ++     G  V +++ G  H   + +SG +YTWG    G  GHG+ E 
Sbjct: 119 HGDEAGHATPKRVEAL--VGATVAQIACGSRHTAIVTASGALYTWGDKENGVAGHGETEG 176

Query: 362 DKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLR- 420
            + LP  L S+ +    Q+ A    T ++ D G ++ +G   FG LG     +S++    
Sbjct: 177 HQYLPRLLESMAAKRVAQISACGFHTAIVTDAGELFTWGEGKFGRLGH----MSERNCHS 232

Query: 421 PRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQE 480
           P I+D +      Q+S G +HT VV++ GRL+ FG  E  QLGH+     + PT  F++ 
Sbjct: 233 PTIVDYMVGKKPRQVSCGGFHTAVVSEDGRLYTFGGGEHGQLGHNDRVNKMTPT--FVEA 290

Query: 481 ME 482
           ++
Sbjct: 291 LD 292



 Score =  126 bits (316), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 88/289 (30%), Positives = 142/289 (49%), Gaps = 15/289 (5%)

Query: 83  LNRCNGNWKRVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLIS-NSSVFSCGSSLCGV 141
           L   +  WK V R  QS+  +  IV      +Q+T G YHT  ++ N  +++ G  + G 
Sbjct: 65  LGHGDNGWKYVPRMTQSL--AGQIV------LQVTCGSYHTAAVTGNGDLYTWGGGMYGK 116

Query: 142 LGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTN 201
           LGHG E        R+     A V Q++    H A V  SG ++T GD  +   GH +T 
Sbjct: 117 LGHGDEAGHATP-KRVEALVGATVAQIACGSRHTAIVTASGALYTWGDKENGVAGHGETE 175

Query: 202 RPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKS 261
              + PRL+E++      Q++A    T  +T  G + T G    G+LGH    +  +P  
Sbjct: 176 GHQYLPRLLESMAAKRVAQISACGFHTAIVTDAGELFTWGEGKFGRLGHMSERNCHSPTI 235

Query: 262 IAPLEEVGSVV-QIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRR 320
           +  +  VG    Q++ G  +   V+ +G +Y+FG G +  LGH ++ +++ P  ++    
Sbjct: 236 VDYM--VGKKPRQVSCGGFHTAVVSEDGRLYTFGGGEHGQLGHNDRVNKMTPTFVEAL-- 291

Query: 321 KGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPL 369
            G+ V +++ G  H VAL   G VYTWG G  G LGHG+     +P+ +
Sbjct: 292 DGMFVSQITCGWSHSVALTVKGLVYTWGNGDHGKLGHGNGRKVAVPQAV 340


>gi|357133876|ref|XP_003568548.1| PREDICTED: uncharacterized protein LOC100838586 [Brachypodium
           distachyon]
          Length = 1090

 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 107/330 (32%), Positives = 162/330 (49%), Gaps = 24/330 (7%)

Query: 151 CVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRL 209
           C+    + F     V  +S    HA  V + G+V++ G+ S    GH  D + P  +P+L
Sbjct: 299 CLLPKPLEFAGRLDVQNISCGGRHATLVTKQGEVYSWGEESGGRLGHGVDCDVP--QPKL 356

Query: 210 VEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSI-APLE 266
           VEAL  +  + V  G   T  +T+ G ++T G+ T   G LGHG+ +    PK +  PLE
Sbjct: 357 VEALAHMNIELVACGEYHTCAVTLSGDLYTWGNGTFNFGLLGHGNEVSHWMPKRLNGPLE 416

Query: 267 EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVV 326
            +  V  I+ GP +   VT  G +++FG GS   LGHG++     PR +++   KG+  V
Sbjct: 417 GI-HVSSISCGPWHTAVVTSAGQLFTFGDGSFGVLGHGDRQSLSVPREVESL--KGLRTV 473

Query: 327 RVSAGDEHVVALD------------SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKS 374
           R + G  H  A+             SSG ++TWG G  G LGHGD+  + +P  ++SL  
Sbjct: 474 RAACGVWHTAAVVEVMVGNSSTSNCSSGKIFTWGDGDKGRLGHGDKDTRLVPTCVASLVE 533

Query: 375 HLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQ 434
               QV      T  L  +G VY  G   +G LG P    +D ++  R+   L  + V +
Sbjct: 534 PNFCQVACGHCFTVALTTSGHVYTMGSSVYGQLGNPQ---ADGMVPARVEGKLHKNFVEE 590

Query: 435 ISTGLYHTVVVTDRGRLFGFGDNERAQLGH 464
           IS G YH  V+T R  ++ +G     +LGH
Sbjct: 591 ISCGAYHVAVLTSRTEVYTWGKGANGRLGH 620



 Score =  116 bits (290), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 94/274 (34%), Positives = 131/274 (47%), Gaps = 21/274 (7%)

Query: 116 ITTGRYHTLLISNSS---VFSCGSSLCGVLGHGPETTQCVSFTRINFP-SAAHVVQVSAS 171
           +  G YHT  ++ S     +  G+   G+LGHG E +  +   R+N P    HV  +S  
Sbjct: 368 VACGEYHTCAVTLSGDLYTWGNGTFNFGLLGHGNEVSHWMP-KRLNGPLEGIHVSSISCG 426

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
             H A V  +GQ+FT GD S    GH D  + +  PR VE+LKG+   +   G+  T  +
Sbjct: 427 PWHTAVVTSAGQLFTFGDGSFGVLGHGD-RQSLSVPREVESLKGLRTVRAACGVWHTAAV 485

Query: 232 T------------IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPS 279
                          G + T G    G+LGHGD   R  P  +A L E  +  Q+A G  
Sbjct: 486 VEVMVGNSSTSNCSSGKIFTWGDGDKGRLGHGDKDTRLVPTCVASLVEP-NFCQVACGHC 544

Query: 280 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 339
           + +A+T +G VY+ GS     LG+  Q D + P  ++    K   V  +S G  HV  L 
Sbjct: 545 FTVALTTSGHVYTMGSSVYGQLGN-PQADGMVPARVEGKLHKNF-VEEISCGAYHVAVLT 602

Query: 340 SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
           S   VYTWGKG  G LGHGD  D+  P  + +LK
Sbjct: 603 SRTEVYTWGKGANGRLGHGDTDDRNSPTLVEALK 636



 Score = 94.7 bits (234), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 78/244 (31%), Positives = 115/244 (47%), Gaps = 31/244 (12%)

Query: 251 GDTLDRPTPKSIAPLEEVG--SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHD 308
           G  +D   PK   PLE  G   V  I+ G  +   VT  G VYS+G  S   LGHG   D
Sbjct: 294 GAKMDCLLPK---PLEFAGRLDVQNISCGGRHATLVTKQGEVYSWGEESGGRLGHGVDCD 350

Query: 309 ELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC--GALGHGDEIDKTLP 366
             QP+ ++      I +V  + G+ H  A+  SG +YTWG G    G LGHG+E+   +P
Sbjct: 351 VPQPKLVEALAHMNIELV--ACGEYHTCAVTLSGDLYTWGNGTFNFGLLGHGNEVSHWMP 408

Query: 367 E----PLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPR 422
           +    PL  +  H++   C     T V+   G ++ FG   FG LG  DR     +  PR
Sbjct: 409 KRLNGPLEGI--HVSSISCG-PWHTAVVTSAGQLFTFGDGSFGVLGHGDR---QSLSVPR 462

Query: 423 ILDSLRAHHVSQISTGLYHTVVVTD------------RGRLFGFGDNERAQLGHDTLRGC 470
            ++SL+     + + G++HT  V +             G++F +GD ++ +LGH      
Sbjct: 463 EVESLKGLRTVRAACGVWHTAAVVEVMVGNSSTSNCSSGKIFTWGDGDKGRLGHGDKDTR 522

Query: 471 LEPT 474
           L PT
Sbjct: 523 LVPT 526



 Score = 79.3 bits (194), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 67/225 (29%), Positives = 105/225 (46%), Gaps = 18/225 (8%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSASEN 173
           I+ G +HT +++++  +F+ G    GVLGHG    Q +S  R +        V+ +    
Sbjct: 423 ISCGPWHTAVVTSAGQLFTFGDGSFGVLGHG--DRQSLSVPREVESLKGLRTVRAACGVW 480

Query: 174 HAAFVLQ------------SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQV 221
           H A V++            SG++FT GD      GH D +  +  P  V +L      QV
Sbjct: 481 HTAAVVEVMVGNSSTSNCSSGKIFTWGDGDKGRLGHGDKDTRLV-PTCVASLVEPNFCQV 539

Query: 222 TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 281
             G  FT  LT  GHV+T GS+ +GQLG+    D   P  +        V +I+ G  ++
Sbjct: 540 ACGHCFTVALTTSGHVYTMGSSVYGQLGNPQA-DGMVPARVEGKLHKNFVEEISCGAYHV 598

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVV 326
             +T    VY++G G+N  LGHG+  D   P  ++  + K +  V
Sbjct: 599 AVLTSRTEVYTWGKGANGRLGHGDTDDRNSPTLVEALKDKQVRSV 643



 Score = 75.9 bits (185), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 61/183 (33%), Positives = 91/183 (49%), Gaps = 8/183 (4%)

Query: 297 SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 356
           S F    G + D L P+ ++   R  + V  +S G  H   +   G VY+WG+   G LG
Sbjct: 287 SRFGNSSGAKMDCLLPKPLEFAGR--LDVQNISCGGRHATLVTKQGEVYSWGEESGGRLG 344

Query: 357 HGDEIDKTLPEPLSSLKSHLAVQVCA-RKRKTFVLVDTGSVY--GFGWMGFGSLGFPDRG 413
           HG + D   P+ + +L +H+ +++ A  +  T  +  +G +Y  G G   FG LG  +  
Sbjct: 345 HGVDCDVPQPKLVEAL-AHMNIELVACGEYHTCAVTLSGDLYTWGNGTFNFGLLGHGNE- 402

Query: 414 VSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEP 473
           VS  + + R+   L   HVS IS G +HT VVT  G+LF FGD     LGH   +    P
Sbjct: 403 VSHWMPK-RLNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGSFGVLGHGDRQSLSVP 461

Query: 474 TEI 476
            E+
Sbjct: 462 REV 464



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 54/199 (27%), Positives = 86/199 (43%), Gaps = 22/199 (11%)

Query: 92  RVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQC 151
           R +R    V H++ +VE   GN   +         S+  +F+ G    G LGHG + T+ 
Sbjct: 471 RTVRAACGVWHTAAVVEVMVGNSSTSN-------CSSGKIFTWGDGDKGRLGHGDKDTRL 523

Query: 152 V-----SFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFR 206
           V     S    NF       QV+        +  SG V+T G +     G+   +  +  
Sbjct: 524 VPTCVASLVEPNF------CQVACGHCFTVALTTSGHVYTMGSSVYGQLGNPQADGMV-- 575

Query: 207 PRLVEA-LKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL 265
           P  VE  L     ++++ G      LT R  V+T G   +G+LGHGDT DR +P  +  L
Sbjct: 576 PARVEGKLHKNFVEEISCGAYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNSPTLVEAL 635

Query: 266 EEVGSVVQIAAGPSYMLAV 284
           ++   V  +  G ++  A+
Sbjct: 636 KD-KQVRSVVCGINFTAAI 653



 Score = 43.9 bits (102), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 38/124 (30%), Positives = 58/124 (46%), Gaps = 3/124 (2%)

Query: 115 QITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
           Q+  G   T+ ++ S  V++ GSS+ G LG+ P+    V            V ++S    
Sbjct: 538 QVACGHCFTVALTTSGHVYTMGSSVYGQLGN-PQADGMVPARVEGKLHKNFVEEISCGAY 596

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
           H A +    +V+T G  ++   GH DT+     P LVEALK    + V  G+NFT  + I
Sbjct: 597 HVAVLTSRTEVYTWGKGANGRLGHGDTDD-RNSPTLVEALKDKQVRSVVCGINFTAAICI 655

Query: 234 RGHV 237
              V
Sbjct: 656 HKWV 659


>gi|350396381|ref|XP_003484535.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like [Bombus
           impatiens]
          Length = 1088

 Score =  142 bits (359), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 103/354 (29%), Positives = 177/354 (50%), Gaps = 15/354 (4%)

Query: 125 LISNSSVFSCGSSLCGVLGHGPETTQCVSFT-RINFPSAAHVVQVSASENHAAFVLQSGQ 183
           L+    +F  G++  G LG G    + +    +++F  A+ + Q++  EN+   +   G+
Sbjct: 27  LLKKGDMFCWGNTRHGELGLGGIEDEIILVPCQVDFKKASEIQQIACGENYTVVITHDGK 86

Query: 184 VFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 243
           +++CG+N     GH    +   R +L+  L     K+V  G   T  +   G + + GSN
Sbjct: 87  IYSCGNNDYGQLGHERGRK---RLQLILGLDAFVFKKVACGAYHTIAVNEWGQLFSWGSN 143

Query: 244 THGQLG-HGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLG 302
           + GQLG +       +P+ +  L     +VQ+A G  + LA+T NG +YS+GS S   LG
Sbjct: 144 SEGQLGLNSKNFMECSPRMVKTLG-TSIIVQVACGMKHALALTNNGELYSWGSNSEGQLG 202

Query: 303 HG-EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEI 361
            G +   E++P+ I T    G+ +  ++ G  H +A+  SG ++ WGK   G LG  D  
Sbjct: 203 LGVDIRSEVKPKLINTL--AGVPIAFIACGGYHSIAISKSGAIFGWGKNTFGQLGLNDTQ 260

Query: 362 DKTLPEPLSSLK-SHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLR 420
           ++ LP  L +L+ + +    C  +   F+ VD G V+  G   +G LG    G ++  + 
Sbjct: 261 NRNLPHQLQTLRNAKICYAACGEEFSVFLTVD-GGVFTCGAGMYGQLG---HGSNNNEIL 316

Query: 421 PRILDSLRAHHVSQISTGLYHTV-VVTDRGRLFGFGDNERAQLGHDTLRGCLEP 473
           PR +  L    V+QIS G  HT+ +V  +GR++ +G     QLG+++ R    P
Sbjct: 317 PRQVMELMGSTVTQISCGKRHTLALVPSQGRVYAWGLGGAGQLGNNSTRSIPTP 370



 Score =  112 bits (280), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 94/299 (31%), Positives = 139/299 (46%), Gaps = 13/299 (4%)

Query: 115 QITTGRYHTLLIS-NSSVFSCGSSLCGVLGH--GPETTQCVSFTRINFPSAAHVVQVSAS 171
           QI  G  +T++I+ +  ++SCG++  G LGH  G +  Q +         A    +V+  
Sbjct: 70  QIACGENYTVVITHDGKIYSCGNNDYGQLGHERGRKRLQLILGL-----DAFVFKKVACG 124

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
             H   V + GQ+F+ G NS    G    N     PR+V+ L      QV  G+     L
Sbjct: 125 AYHTIAVNEWGQLFSWGSNSEGQLGLNSKNFMECSPRMVKTLGTSIIVQVACGMKHALAL 184

Query: 232 TIRGHVHTCGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 290
           T  G +++ GSN+ GQLG G D      PK I  L  V  +  IA G  + +A++ +G +
Sbjct: 185 TNNGELYSWGSNSEGQLGLGVDIRSEVKPKLINTLAGV-PIAFIACGGYHSIAISKSGAI 243

Query: 291 YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKG 350
           + +G  +   LG  +  +   P  +QT R   I     + G+E  V L   G V+T G G
Sbjct: 244 FGWGKNTFGQLGLNDTQNRNLPHQLQTLRNAKI--CYAACGEEFSVFLTVDGGVFTCGAG 301

Query: 351 YCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDT-GSVYGFGWMGFGSLG 408
             G LGHG   ++ LP  +  L      Q+   KR T  LV + G VY +G  G G LG
Sbjct: 302 MYGQLGHGSNNNEILPRQVMELMGSTVTQISCGKRHTLALVPSQGRVYAWGLGGAGQLG 360



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 77/256 (30%), Positives = 123/256 (48%), Gaps = 7/256 (2%)

Query: 115 QITTGRYHTLLISN-SSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
           ++  G YHT+ ++    +FS GS+  G LG   +     S   +     + +VQV+    
Sbjct: 120 KVACGAYHTIAVNEWGQLFSWGSNSEGQLGLNSKNFMECSPRMVKTLGTSIIVQVACGMK 179

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
           HA  +  +G++++ G NS    G     R   +P+L+  L GVP   +  G   +  ++ 
Sbjct: 180 HALALTNNGELYSWGSNSEGQLGLGVDIRSEVKPKLINTLAGVPIAFIACGGYHSIAISK 239

Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
            G +   G NT GQLG  DT +R  P  +  L     +   A G  + + +T +G V++ 
Sbjct: 240 SGAIFGWGKNTFGQLGLNDTQNRNLPHQLQTLRN-AKICYAACGEEFSVFLTVDGGVFTC 298

Query: 294 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL-DSSGYVYTWGKGYC 352
           G+G    LGHG  ++E+ PR  Q     G  V ++S G  H +AL  S G VY WG G  
Sbjct: 299 GAGMYGQLGHGSNNNEILPR--QVMELMGSTVTQISCGKRHTLALVPSQGRVYAWGLGGA 356

Query: 353 GALGHGDEIDKTLPEP 368
           G LG+     +++P P
Sbjct: 357 GQLGNNS--TRSIPTP 370



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 44/149 (29%), Positives = 65/149 (43%), Gaps = 4/149 (2%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           I  G YH++ IS S ++F  G +  G LG      + +   ++     A +   +  E  
Sbjct: 227 IACGGYHSIAISKSGAIFGWGKNTFGQLGLNDTQNRNLPH-QLQTLRNAKICYAACGEEF 285

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFT-GFLTI 233
           + F+   G VFTCG       GH   N  I  PR V  L G    Q++ G   T   +  
Sbjct: 286 SVFLTVDGGVFTCGAGMYGQLGHGSNNNEIL-PRQVMELMGSTVTQISCGKRHTLALVPS 344

Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPTPKSI 262
           +G V+  G    GQLG+  T   PTP+ +
Sbjct: 345 QGRVYAWGLGGAGQLGNNSTRSIPTPQVV 373


>gi|340729980|ref|XP_003403270.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like [Bombus
           terrestris]
          Length = 1104

 Score =  141 bits (356), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 103/354 (29%), Positives = 175/354 (49%), Gaps = 15/354 (4%)

Query: 125 LISNSSVFSCGSSLCGVLGHGPETTQCVSFT-RINFPSAAHVVQVSASENHAAFVLQSGQ 183
           L+    +F  G++  G LG G    + +     ++F  A+ + Q++  EN+   +   G+
Sbjct: 43  LLKKEDMFCWGNTRHGELGLGGIEDEIILVPCEVDFKKASEIQQIACGENYTVVITHDGK 102

Query: 184 VFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 243
           +++CG+N     GH    +   R +L+  L     K+   G   T  +   G + + GSN
Sbjct: 103 IYSCGNNDYGQLGHEQGRK---RLQLILGLDAFVFKKAACGAYHTIAVNEWGQLFSWGSN 159

Query: 244 THGQLG-HGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLG 302
           + GQLG +       +P+ +  L     +VQIA G  + LA+T NG +YS+GS S   LG
Sbjct: 160 SEGQLGLNSKNFMECSPRMVKTLG-TSIIVQIACGMKHALALTNNGELYSWGSNSEGQLG 218

Query: 303 HG-EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEI 361
            G +   E++P+ I T    G+ +  ++ G  H +A+  SG ++ WGK   G LG  D  
Sbjct: 219 LGVDIRCEMKPKLINTL--AGVPIAFIACGGYHSIAISKSGAIFGWGKNTFGQLGLNDTQ 276

Query: 362 DKTLPEPLSSLK-SHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLR 420
           ++ LP  L +L+ + +    C  +   F+ VD G V+  G   +G LG    G ++  + 
Sbjct: 277 NRNLPYQLQTLRNAKVCYAACGEEFSVFLTVD-GGVFTCGAGMYGQLG---HGSNNNEIL 332

Query: 421 PRILDSLRAHHVSQISTGLYHTV-VVTDRGRLFGFGDNERAQLGHDTLRGCLEP 473
           PR +  L    V+QIS G  HT+ +V  +GR++ +G     QLG+++ R    P
Sbjct: 333 PRQVMELMGSTVTQISCGKRHTLALVPSQGRVYAWGLGGAGQLGNNSTRSTTTP 386



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 94/300 (31%), Positives = 138/300 (46%), Gaps = 15/300 (5%)

Query: 115 QITTGRYHTLLIS-NSSVFSCGSSLCGVLGH--GPETTQCV-SFTRINFPSAAHVVQVSA 170
           QI  G  +T++I+ +  ++SCG++  G LGH  G +  Q +       F  AA       
Sbjct: 86  QIACGENYTVVITHDGKIYSCGNNDYGQLGHEQGRKRLQLILGLDAFVFKKAA------C 139

Query: 171 SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
              H   V + GQ+F+ G NS    G    N     PR+V+ L      Q+  G+     
Sbjct: 140 GAYHTIAVNEWGQLFSWGSNSEGQLGLNSKNFMECSPRMVKTLGTSIIVQIACGMKHALA 199

Query: 231 LTIRGHVHTCGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 289
           LT  G +++ GSN+ GQLG G D      PK I  L  V  +  IA G  + +A++ +G 
Sbjct: 200 LTNNGELYSWGSNSEGQLGLGVDIRCEMKPKLINTLAGV-PIAFIACGGYHSIAISKSGA 258

Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 349
           ++ +G  +   LG  +  +   P  +QT R     V   + G+E  V L   G V+T G 
Sbjct: 259 IFGWGKNTFGQLGLNDTQNRNLPYQLQTLRNA--KVCYAACGEEFSVFLTVDGGVFTCGA 316

Query: 350 GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDT-GSVYGFGWMGFGSLG 408
           G  G LGHG   ++ LP  +  L      Q+   KR T  LV + G VY +G  G G LG
Sbjct: 317 GMYGQLGHGSNNNEILPRQVMELMGSTVTQISCGKRHTLALVPSQGRVYAWGLGGAGQLG 376



 Score =  105 bits (262), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 77/251 (30%), Positives = 119/251 (47%), Gaps = 5/251 (1%)

Query: 119 GRYHTLLISN-SSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAF 177
           G YHT+ ++    +FS GS+  G LG   +     S   +     + +VQ++    HA  
Sbjct: 140 GAYHTIAVNEWGQLFSWGSNSEGQLGLNSKNFMECSPRMVKTLGTSIIVQIACGMKHALA 199

Query: 178 VLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHV 237
           +  +G++++ G NS    G     R   +P+L+  L GVP   +  G   +  ++  G +
Sbjct: 200 LTNNGELYSWGSNSEGQLGLGVDIRCEMKPKLINTLAGVPIAFIACGGYHSIAISKSGAI 259

Query: 238 HTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 297
              G NT GQLG  DT +R  P  +  L     V   A G  + + +T +G V++ G+G 
Sbjct: 260 FGWGKNTFGQLGLNDTQNRNLPYQLQTLRN-AKVCYAACGEEFSVFLTVDGGVFTCGAGM 318

Query: 298 NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL-DSSGYVYTWGKGYCGALG 356
              LGHG  ++E+ PR  Q     G  V ++S G  H +AL  S G VY WG G  G LG
Sbjct: 319 YGQLGHGSNNNEILPR--QVMELMGSTVTQISCGKRHTLALVPSQGRVYAWGLGGAGQLG 376

Query: 357 HGDEIDKTLPE 367
           +      T P+
Sbjct: 377 NNSTRSTTTPQ 387



 Score = 53.1 bits (126), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 44/149 (29%), Positives = 65/149 (43%), Gaps = 4/149 (2%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           I  G YH++ IS S ++F  G +  G LG      + + + ++     A V   +  E  
Sbjct: 243 IACGGYHSIAISKSGAIFGWGKNTFGQLGLNDTQNRNLPY-QLQTLRNAKVCYAACGEEF 301

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFT-GFLTI 233
           + F+   G VFTCG       GH   N  I  PR V  L G    Q++ G   T   +  
Sbjct: 302 SVFLTVDGGVFTCGAGMYGQLGHGSNNNEIL-PRQVMELMGSTVTQISCGKRHTLALVPS 360

Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPTPKSI 262
           +G V+  G    GQLG+  T    TP+ +
Sbjct: 361 QGRVYAWGLGGAGQLGNNSTRSTTTPQVV 389


>gi|170062906|ref|XP_001866871.1| hect E3 ubiquitin ligase [Culex quinquefasciatus]
 gi|167880719|gb|EDS44102.1| hect E3 ubiquitin ligase [Culex quinquefasciatus]
          Length = 679

 Score =  141 bits (356), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 99/326 (30%), Positives = 163/326 (50%), Gaps = 8/326 (2%)

Query: 130 SVFSCGSSLCGVLGHG-PETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCG 188
           +++  GS++ G LG G  E  Q ++   +++  AA+V Q +   +H   + + G+++TCG
Sbjct: 2   ALYCWGSTVHGELGLGGIEEEQVMTPREMDWSQAANVQQAACGGSHTLLLTKDGKLYTCG 61

Query: 189 DNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQL 248
           +N     GH   N P  RP+ + AL+     QV+ GL+ +  LT  G + + GSN  GQL
Sbjct: 62  NNDHGQLGHDTNNLPNKRPQFISALENYIVTQVSCGLSHSLALTNWGQLFSWGSNATGQL 121

Query: 249 GHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH 307
           GH  D +  P P+ I  +    +VVQI+ G S+ LA+T +G ++++G+     LG G   
Sbjct: 122 GHDLDMVSYPAPRMIKSI-ATKTVVQISCGHSHCLALTNSGELFAWGANEYGQLGLGTTG 180

Query: 308 DELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPE 367
            ++ P A       GI +  ++ G  H  A+  SG ++ WGK   G LG  D   +  P 
Sbjct: 181 KKV-PTATLVKSLAGIPIAFIACGGNHSFAVSKSGAIFGWGKNTFGQLGLNDLDSRCYPT 239

Query: 368 PLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSL 427
            L +L+S     +      +  L   G V+  G   FG LG    G     + PR++  L
Sbjct: 240 QLKTLRSLGVRYISCGDDFSVFLTQEGGVFTCGLGTFGQLG---HGTHGNEILPRMVFEL 296

Query: 428 RAHHVSQISTGLYHTVV-VTDRGRLF 452
               ++QI+ G  HT+  V  RG+++
Sbjct: 297 MGSKITQIACGRKHTLAFVPSRGKVY 322



 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 93/281 (33%), Positives = 139/281 (49%), Gaps = 17/281 (6%)

Query: 204 IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPT--PKS 261
           +  PR ++  +    +Q   G + T  LT  G ++TCG+N HGQLGH DT + P   P+ 
Sbjct: 24  VMTPREMDWSQAANVQQAACGGSHTLLLTKDGKLYTCGNNDHGQLGH-DTNNLPNKRPQF 82

Query: 262 IAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHG-EQHDELQPRAIQTFRR 320
           I+ LE    V Q++ G S+ LA+T  G ++S+GS +   LGH  +      PR I++   
Sbjct: 83  ISALENY-IVTQVSCGLSHSLALTNWGQLFSWGSNATGQLGHDLDMVSYPAPRMIKSIAT 141

Query: 321 KGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLA--- 377
           K   VV++S G  H +AL +SG ++ WG    G LG G    K    P ++L   LA   
Sbjct: 142 KT--VVQISCGHSHCLALTNSGELFAWGANEYGQLGLGTTGKKV---PTATLVKSLAGIP 196

Query: 378 -VQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS 436
              +      +F +  +G+++G+G   FG LG  D    D    P  L +LR+  V  IS
Sbjct: 197 IAFIACGGNHSFAVSKSGAIFGWGKNTFGQLGLNDL---DSRCYPTQLKTLRSLGVRYIS 253

Query: 437 TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF 477
            G   +V +T  G +F  G     QLGH T    + P  +F
Sbjct: 254 CGDDFSVFLTQEGGVFTCGLGTFGQLGHGTHGNEILPRMVF 294



 Score =  102 bits (253), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 86/294 (29%), Positives = 138/294 (46%), Gaps = 12/294 (4%)

Query: 110 SAGNMQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAH---V 165
           +A   Q   G  HTLL++ +  +++CG++  G LGH    T  +   R  F SA     V
Sbjct: 35  AANVQQAACGGSHTLLLTKDGKLYTCGNNDHGQLGHD---TNNLPNKRPQFISALENYIV 91

Query: 166 VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 225
            QVS   +H+  +   GQ+F+ G N++   GH         PR+++++      Q++ G 
Sbjct: 92  TQVSCGLSHSLALTNWGQLFSWGSNATGQLGHDLDMVSYPAPRMIKSIATKTVVQISCGH 151

Query: 226 NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDR-PTPKSIAPLEEVGSVVQIAAGPSYMLAV 284
           +    LT  G +   G+N +GQLG G T  + PT   +  L  +  +  IA G ++  AV
Sbjct: 152 SHCLALTNSGELFAWGANEYGQLGLGTTGKKVPTATLVKSLAGI-PIAFIACGGNHSFAV 210

Query: 285 TGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           + +G ++ +G  +   LG  +      P  ++T R  G+    +S GD+  V L   G V
Sbjct: 211 SKSGAIFGWGKNTFGQLGLNDLDSRCYPTQLKTLRSLGVRY--ISCGDDFSVFLTQEGGV 268

Query: 345 YTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVY 397
           +T G G  G LGHG   ++ LP  +  L      Q+ C RK     +   G VY
Sbjct: 269 FTCGLGTFGQLGHGTHGNEILPRMVFELMGSKITQIACGRKHTLAFVPSRGKVY 322



 Score = 93.2 bits (230), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 69/244 (28%), Positives = 117/244 (47%), Gaps = 9/244 (3%)

Query: 237 VHTCGSNTHGQLGHGDTLDRP--TPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 294
           ++  GS  HG+LG G   +    TP+ +    +  +V Q A G S+ L +T +G +Y+ G
Sbjct: 3   LYCWGSTVHGELGLGGIEEEQVMTPREM-DWSQAANVQQAACGGSHTLLLTKDGKLYTCG 61

Query: 295 SGSNFCLGHGEQH-DELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 353
           +  +  LGH   +    +P+ I     +   V +VS G  H +AL + G +++WG    G
Sbjct: 62  NNDHGQLGHDTNNLPNKRPQFISAL--ENYIVTQVSCGLSHSLALTNWGQLFSWGSNATG 119

Query: 354 ALGHG-DEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDR 412
            LGH  D +    P  + S+ +   VQ+         L ++G ++ +G   +G LG    
Sbjct: 120 QLGHDLDMVSYPAPRMIKSIATKTVVQISCGHSHCLALTNSGELFAWGANEYGQLGLGTT 179

Query: 413 GVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLE 472
           G   KV    ++ SL    ++ I+ G  H+  V+  G +FG+G N   QLG + L     
Sbjct: 180 G--KKVPTATLVKSLAGIPIAFIACGGNHSFAVSKSGAIFGWGKNTFGQLGLNDLDSRCY 237

Query: 473 PTEI 476
           PT++
Sbjct: 238 PTQL 241



 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 57/195 (29%), Positives = 93/195 (47%), Gaps = 8/195 (4%)

Query: 290 VYSFGSGSNFCLGHG--EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 347
           +Y +GS  +  LG G  E+   + PR +     +  +V + + G  H + L   G +YT 
Sbjct: 3   LYCWGSTVHGELGLGGIEEEQVMTPREMD--WSQAANVQQAACGGSHTLLLTKDGKLYTC 60

Query: 348 GKGYCGALGHG-DEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGS 406
           G    G LGH  + +    P+ +S+L++++  QV      +  L + G ++ +G    G 
Sbjct: 61  GNNDHGQLGHDTNNLPNKRPQFISALENYIVTQVSCGLSHSLALTNWGQLFSWGSNATGQ 120

Query: 407 LGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDT 466
           LG     VS     PR++ S+    V QIS G  H + +T+ G LF +G NE  QLG  T
Sbjct: 121 LGHDLDMVSYPA--PRMIKSIATKTVVQISCGHSHCLALTNSGELFAWGANEYGQLGLGT 178

Query: 467 LRGCLEPTEIFIQEM 481
             G   PT   ++ +
Sbjct: 179 -TGKKVPTATLVKSL 192


>gi|428178045|gb|EKX46922.1| hypothetical protein GUITHDRAFT_86569 [Guillardia theta CCMP2712]
          Length = 306

 Score =  141 bits (355), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 94/284 (33%), Positives = 145/284 (51%), Gaps = 9/284 (3%)

Query: 183 QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 242
           +V++ G       GH D  +   +PRLV A  G   +QV+ G   T  L   G V T G 
Sbjct: 7   EVYSWGQGVLGQLGHGD-EKTQRQPRLVVAFLGFNVRQVSCGNQHTAILMENGEVFTFGR 65

Query: 243 NTHGQLGHGD--TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 300
              GQLG G   T +  TP  ++ L+    V Q+A G  +  A+  NG +Y++GSG    
Sbjct: 66  GNFGQLGQGASVTANVSTPALVSALQGK-HVKQVACGWHHTCALIDNGQLYTWGSGEYGR 124

Query: 301 LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 360
           LGHG++  +  P+ +++ + K   V  V+AG  H   +   G + TWG GY G LGHGDE
Sbjct: 125 LGHGDEVRQASPKLVESLQGK--EVTFVAAGGFHSSVIIEGGNLLTWGGGYFGQLGHGDE 182

Query: 361 IDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLR 420
            D+  P+ +  ++  +A +V      T +L  +  V+ +G   FG LG  D    +K   
Sbjct: 183 TDRKTPKMVKGVQQCIAHEVACGTHHTLMLTQSQEVWTWGSGEFGKLGIGDE---EKHAE 239

Query: 421 PRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 464
           P ++ +L+   V  ISTG +H+  +T  G L+ +G  ++ QLGH
Sbjct: 240 PIMITALQGVGVIHISTGGFHSAALTSEGVLYTWGGGDKGQLGH 283



 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 89/268 (33%), Positives = 137/268 (51%), Gaps = 6/268 (2%)

Query: 115 QITTGRYHT-LLISNSSVFSCGSSLCGVLGHGPETTQCVSF-TRINFPSAAHVVQVSASE 172
           Q++ G  HT +L+ N  VF+ G    G LG G   T  VS    ++     HV QV+   
Sbjct: 43  QVSCGNQHTAILMENGEVFTFGRGNFGQLGQGASVTANVSTPALVSALQGKHVKQVACGW 102

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
           +H   ++ +GQ++T G       GH D  R    P+LVE+L+G     V AG   +  + 
Sbjct: 103 HHTCALIDNGQLYTWGSGEYGRLGHGDEVRQA-SPKLVESLQGKEVTFVAAGGFHSSVII 161

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
             G++ T G    GQLGHGD  DR TPK +  +++     ++A G  + L +T +  V++
Sbjct: 162 EGGNLLTWGGGYFGQLGHGDETDRKTPKMVKGVQQC-IAHEVACGTHHTLMLTQSQEVWT 220

Query: 293 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 352
           +GSG    LG G++    +P  I   +  G+ V+ +S G  H  AL S G +YTWG G  
Sbjct: 221 WGSGEFGKLGIGDEEKHAEPIMITALQ--GVGVIHISTGGFHSAALTSEGVLYTWGGGDK 278

Query: 353 GALGHGDEIDKTLPEPLSSLKSHLAVQV 380
           G LGHGDE  + +P  +  +   +++ V
Sbjct: 279 GQLGHGDENSQNIPVVVEVISCDMSILV 306



 Score =  122 bits (306), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 92/290 (31%), Positives = 138/290 (47%), Gaps = 15/290 (5%)

Query: 129 SSVFSCGSSLCGVLGHGPETTQ-----CVSFTRINFPSAAHVVQVSASENHAAFVLQSGQ 183
           S V+S G  + G LGHG E TQ      V+F   N      V QVS    H A ++++G+
Sbjct: 6   SEVYSWGQGVLGQLGHGDEKTQRQPRLVVAFLGFN------VRQVSCGNQHTAILMENGE 59

Query: 184 VFTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 242
           VFT G  +    G        +  P LV AL+G   KQV  G + T  L   G ++T GS
Sbjct: 60  VFTFGRGNFGQLGQGASVTANVSTPALVSALQGKHVKQVACGWHHTCALIDNGQLYTWGS 119

Query: 243 NTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLG 302
             +G+LGHGD + + +PK +  L+    V  +AAG  +   +   G + ++G G    LG
Sbjct: 120 GEYGRLGHGDEVRQASPKLVESLQGK-EVTFVAAGGFHSSVIIEGGNLLTWGGGYFGQLG 178

Query: 303 HGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEID 362
           HG++ D   P+ ++  ++   H   V+ G  H + L  S  V+TWG G  G LG GDE  
Sbjct: 179 HGDETDRKTPKMVKGVQQCIAH--EVACGTHHTLMLTQSQEVWTWGSGEFGKLGIGDEEK 236

Query: 363 KTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDR 412
              P  +++L+    + +      +  L   G +Y +G    G LG  D 
Sbjct: 237 HAEPIMITALQGVGVIHISTGGFHSAALTSEGVLYTWGGGDKGQLGHGDE 286


>gi|449444879|ref|XP_004140201.1| PREDICTED: uncharacterized protein LOC101207486 [Cucumis sativus]
 gi|449480975|ref|XP_004156044.1| PREDICTED: uncharacterized LOC101207486 [Cucumis sativus]
          Length = 1104

 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 102/315 (32%), Positives = 156/315 (49%), Gaps = 22/315 (6%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V  ++    HAA V + G++FT G+ S    GH   +  + +P+LV+AL     + V+ G
Sbjct: 310 VQNIACGGRHAALVTKQGEIFTWGEESGGRLGH-GVDSDVLQPKLVDALGNTNIELVSCG 368

Query: 225 LNFTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSI-APLEEVGSVVQIAAGPSYM 281
              T  +T+ G ++T G  T+  G LGHG+ +    PK I  PLE +  V  IA GP + 
Sbjct: 369 EYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWIPKKINGPLEGI-HVSSIACGPWHT 427

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL--- 338
             VT  G +++FG G+   LGHG++     PR +++   KG+  VR + G  H  A+   
Sbjct: 428 AVVTSAGQLFTFGDGTFGVLGHGDRGSVTMPREVESL--KGLRTVRAACGVWHTAAVVEV 485

Query: 339 ---------DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFV 389
                     SSG ++TWG G  G LGHGD+  K +P  +++L      +V      T  
Sbjct: 486 MVGSSSSSNCSSGKLFTWGDGDKGRLGHGDKETKLVPTCVAALVDPNFCRVSCGHSMTVA 545

Query: 390 LVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRG 449
           L  +G VY  G   +G LG P    +D  +  R+   L    V +I+ G YH  V+T R 
Sbjct: 546 LTTSGHVYTMGSPVYGQLGNPH---ADGKVPVRVEGKLSKSFVEEIACGAYHVAVLTSRT 602

Query: 450 RLFGFGDNERAQLGH 464
            ++ +G     +LGH
Sbjct: 603 EVYTWGKGANGRLGH 617



 Score =  105 bits (262), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 85/274 (31%), Positives = 128/274 (46%), Gaps = 21/274 (7%)

Query: 116 ITTGRYHTLLISNSS---VFSCGSSLCGVLGHGPETTQCVSFTRINFP-SAAHVVQVSAS 171
           ++ G YHT  ++ S     +  G+   G+LGHG E +  +   +IN P    HV  ++  
Sbjct: 365 VSCGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWIP-KKINGPLEGIHVSSIACG 423

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
             H A V  +GQ+FT GD +    GH D    +  PR VE+LKG+   +   G+  T  +
Sbjct: 424 PWHTAVVTSAGQLFTFGDGTFGVLGHGDRGS-VTMPREVESLKGLRTVRAACGVWHTAAV 482

Query: 232 T------------IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPS 279
                          G + T G    G+LGHGD   +  P  +A L +  +  +++ G S
Sbjct: 483 VEVMVGSSSSSNCSSGKLFTWGDGDKGRLGHGDKETKLVPTCVAALVDP-NFCRVSCGHS 541

Query: 280 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 339
             +A+T +G VY+ GS     LG+     ++  R      +    V  ++ G  HV  L 
Sbjct: 542 MTVALTTSGHVYTMGSPVYGQLGNPHADGKVPVRVEGKLSKS--FVEEIACGAYHVAVLT 599

Query: 340 SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
           S   VYTWGKG  G LGHGD  D+  P  + +LK
Sbjct: 600 SRTEVYTWGKGANGRLGHGDTDDRNSPTLVEALK 633



 Score = 99.8 bits (247), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 73/222 (32%), Positives = 107/222 (48%), Gaps = 26/222 (11%)

Query: 271 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 330
           V  IA G  +   VT  G ++++G  S   LGHG   D LQP+ +       I +  VS 
Sbjct: 310 VQNIACGGRHAALVTKQGEIFTWGEESGGRLGHGVDSDVLQPKLVDALGNTNIEL--VSC 367

Query: 331 GDEHVVALDSSGYVYTWGKGYC--GALGHGDEIDKTLPE----PLSSLKSHLAVQVCARK 384
           G+ H  A+  SG +YTWG G    G LGHG+E+   +P+    PL  +  H++   C   
Sbjct: 368 GEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWIPKKINGPLEGI--HVSSIACG-P 424

Query: 385 RKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV 444
             T V+   G ++ FG   FG LG  DRG    V  PR ++SL+     + + G++HT  
Sbjct: 425 WHTAVVTSAGQLFTFGDGTFGVLGHGDRG---SVTMPREVESLKGLRTVRAACGVWHTAA 481

Query: 445 VTD------------RGRLFGFGDNERAQLGHDTLRGCLEPT 474
           V +             G+LF +GD ++ +LGH      L PT
Sbjct: 482 VVEVMVGSSSSSNCSSGKLFTWGDGDKGRLGHGDKETKLVPT 523



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 76/272 (27%), Positives = 127/272 (46%), Gaps = 19/272 (6%)

Query: 207 PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 266
           P+ +E+   +  + +  G      +T +G + T G  + G+LGHG   D   PK +  L 
Sbjct: 299 PKALESAVVLDVQNIACGGRHAALVTKQGEIFTWGEESGGRLGHGVDSDVLQPKLVDALG 358

Query: 267 EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS-NF-CLGHGEQHDELQPRAIQTFRRKGIH 324
              ++  ++ G  +  AVT +G +Y++G G+ NF  LGHG +     P+ I     +GIH
Sbjct: 359 NT-NIELVSCGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWIPKKING-PLEGIH 416

Query: 325 VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARK 384
           V  ++ G  H   + S+G ++T+G G  G LGHGD    T+P  + SLK    V+     
Sbjct: 417 VSSIACGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRGSVTMPREVESLKGLRTVRAACGV 476

Query: 385 RKTFVLVDT------------GSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHV 432
             T  +V+             G ++ +G    G LG  D+   +  L P  + +L   + 
Sbjct: 477 WHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDKGRLGHGDK---ETKLVPTCVAALVDPNF 533

Query: 433 SQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 464
            ++S G   TV +T  G ++  G     QLG+
Sbjct: 534 CRVSCGHSMTVALTTSGHVYTMGSPVYGQLGN 565



 Score = 88.6 bits (218), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 90/350 (25%), Positives = 144/350 (41%), Gaps = 21/350 (6%)

Query: 119 GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
           GR+  L+     +F+ G    G LGHG ++   +    ++     ++  VS  E H   V
Sbjct: 317 GRHAALVTKQGEIFTWGEESGGRLGHGVDS-DVLQPKLVDALGNTNIELVSCGEYHTCAV 375

Query: 179 LQSGQVFTCGDNS-SF-CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
             SG ++T GD + +F   GH +        ++   L+G+    +  G   T  +T  G 
Sbjct: 376 TLSGDLYTWGDGTYNFGLLGHGNEVSHWIPKKINGPLEGIHVSSIACGPWHTAVVTSAGQ 435

Query: 237 VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT----------- 285
           + T G  T G LGHGD      P+ +  L+ +   V+ A G  +  AV            
Sbjct: 436 LFTFGDGTFGVLGHGDRGSVTMPREVESLKGL-RTVRAACGVWHTAAVVEVMVGSSSSSN 494

Query: 286 -GNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
             +G ++++G G    LGHG++  +L P  +        +  RVS G    VAL +SG+V
Sbjct: 495 CSSGKLFTWGDGDKGRLGHGDKETKLVPTCVAALVDP--NFCRVSCGHSMTVALTTSGHV 552

Query: 345 YTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGF 404
           YT G    G LG+     K        L      ++        VL     VY +G    
Sbjct: 553 YTMGSPVYGQLGNPHADGKVPVRVEGKLSKSFVEEIACGAYHVAVLTSRTEVYTWGKGAN 612

Query: 405 GSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 454
           G LG  D   +D    P ++++L+   V  I+ G   T  +     + GF
Sbjct: 613 GRLGHGD---TDDRNSPTLVEALKDKQVKSIACGTNFTAAICLHKWVSGF 659



 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 70/251 (27%), Positives = 112/251 (44%), Gaps = 20/251 (7%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSASEN 173
           I  G +HT +++++  +F+ G    GVLGHG   +  V+  R +        V+ +    
Sbjct: 420 IACGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRGS--VTMPREVESLKGLRTVRAACGVW 477

Query: 174 HAAFVLQ------------SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQV 221
           H A V++            SG++FT GD      GH D    +  P  V AL      +V
Sbjct: 478 HTAAVVEVMVGSSSSSNCSSGKLFTWGDGDKGRLGHGDKETKLV-PTCVAALVDPNFCRV 536

Query: 222 TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 281
           + G + T  LT  GHV+T GS  +GQLG+    D   P  +        V +IA G  ++
Sbjct: 537 SCGHSMTVALTTSGHVYTMGSPVYGQLGNPHA-DGKVPVRVEGKLSKSFVEEIACGAYHV 595

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 341
             +T    VY++G G+N  LGHG+  D   P  ++  + K   V  ++ G     A+   
Sbjct: 596 AVLTSRTEVYTWGKGANGRLGHGDTDDRNSPTLVEALKDK--QVKSIACGTNFTAAICLH 653

Query: 342 GYVYTWGKGYC 352
            +V  + +  C
Sbjct: 654 KWVSGFDQSMC 664



 Score = 68.2 bits (165), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 58/183 (31%), Positives = 87/183 (47%), Gaps = 10/183 (5%)

Query: 296 GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGAL 355
           GS F L    + D L P+A+++     + V  ++ G  H   +   G ++TWG+   G L
Sbjct: 287 GSCFSL----KMDSLLPKALESAVV--LDVQNIACGGRHAALVTKQGEIFTWGEESGGRL 340

Query: 356 GHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVY--GFGWMGFGSLGFPDRG 413
           GHG + D   P+ + +L +     V   +  T  +  +G +Y  G G   FG LG  +  
Sbjct: 341 GHGVDSDVLQPKLVDALGNTNIELVSCGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNE- 399

Query: 414 VSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEP 473
           VS  + + +I   L   HVS I+ G +HT VVT  G+LF FGD     LGH        P
Sbjct: 400 VSHWIPK-KINGPLEGIHVSSIACGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRGSVTMP 458

Query: 474 TEI 476
            E+
Sbjct: 459 REV 461



 Score = 55.1 bits (131), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 54/195 (27%), Positives = 86/195 (44%), Gaps = 14/195 (7%)

Query: 92  RVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQC 151
           R +R    V H++ +VE       +  G   +   S+  +F+ G    G LGHG + T+ 
Sbjct: 468 RTVRAACGVWHTAAVVE-------VMVGSSSSSNCSSGKLFTWGDGDKGRLGHGDKETKL 520

Query: 152 VSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCG--HRDTNRPIFRPRL 209
           V  T +      +  +VS   +    +  SG V+T G       G  H D   P+   R+
Sbjct: 521 VP-TCVAALVDPNFCRVSCGHSMTVALTTSGHVYTMGSPVYGQLGNPHADGKVPV---RV 576

Query: 210 VEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG 269
              L     +++  G      LT R  V+T G   +G+LGHGDT DR +P  +  L++  
Sbjct: 577 EGKLSKSFVEEIACGAYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNSPTLVEALKD-K 635

Query: 270 SVVQIAAGPSYMLAV 284
            V  IA G ++  A+
Sbjct: 636 QVKSIACGTNFTAAI 650


>gi|170060307|ref|XP_001865743.1| hect E3 ubiquitin ligase [Culex quinquefasciatus]
 gi|167878807|gb|EDS42190.1| hect E3 ubiquitin ligase [Culex quinquefasciatus]
          Length = 1063

 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 99/326 (30%), Positives = 163/326 (50%), Gaps = 8/326 (2%)

Query: 130 SVFSCGSSLCGVLGHG-PETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCG 188
           +++  GS++ G LG G  E  Q ++   +++  AA+V Q +   +H   + + G+++TCG
Sbjct: 2   ALYCWGSTVHGELGLGGIEEEQVMTPREMDWSQAANVQQAACGGSHTLLLTKDGKLYTCG 61

Query: 189 DNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQL 248
           +N     GH   N P  RP+ + AL+     QV+ GL+ +  LT  G + + GSN  GQL
Sbjct: 62  NNDHGQLGHDTNNLPNKRPQFISALENYIVTQVSCGLSHSLALTNWGQLFSWGSNATGQL 121

Query: 249 GHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH 307
           GH  D +  P P+ I  +    +VVQI+ G S+ LA+T +G ++++G+     LG G   
Sbjct: 122 GHDLDMVSYPAPRMIKSI-ATKTVVQISCGHSHCLALTNSGELFAWGANEYGQLGLGTTG 180

Query: 308 DELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPE 367
            ++ P A       GI +  ++ G  H  A+  SG ++ WGK   G LG  D   +  P 
Sbjct: 181 KKV-PTATLVKSLAGIPIAFIACGGNHSFAVSKSGAIFGWGKNTFGQLGLNDLDSRCYPT 239

Query: 368 PLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSL 427
            L +L+S     +      +  L   G V+  G   FG LG    G     + PR++  L
Sbjct: 240 QLKTLRSLGVRYISCGDDFSVFLTQEGGVFTCGLGTFGQLG---HGTHGNEILPRMVFEL 296

Query: 428 RAHHVSQISTGLYHTVV-VTDRGRLF 452
               ++QI+ G  HT+  V  RG+++
Sbjct: 297 MGSKITQIACGRKHTLAFVPSRGKVY 322



 Score =  114 bits (286), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 93/281 (33%), Positives = 139/281 (49%), Gaps = 17/281 (6%)

Query: 204 IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPT--PKS 261
           +  PR ++  +    +Q   G + T  LT  G ++TCG+N HGQLGH DT + P   P+ 
Sbjct: 24  VMTPREMDWSQAANVQQAACGGSHTLLLTKDGKLYTCGNNDHGQLGH-DTNNLPNKRPQF 82

Query: 262 IAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHG-EQHDELQPRAIQTFRR 320
           I+ LE    V Q++ G S+ LA+T  G ++S+GS +   LGH  +      PR I++   
Sbjct: 83  ISALENY-IVTQVSCGLSHSLALTNWGQLFSWGSNATGQLGHDLDMVSYPAPRMIKSIAT 141

Query: 321 KGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLA--- 377
           K   VV++S G  H +AL +SG ++ WG    G LG G    K    P ++L   LA   
Sbjct: 142 KT--VVQISCGHSHCLALTNSGELFAWGANEYGQLGLGTTGKKV---PTATLVKSLAGIP 196

Query: 378 -VQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS 436
              +      +F +  +G+++G+G   FG LG  D    D    P  L +LR+  V  IS
Sbjct: 197 IAFIACGGNHSFAVSKSGAIFGWGKNTFGQLGLNDL---DSRCYPTQLKTLRSLGVRYIS 253

Query: 437 TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF 477
            G   +V +T  G +F  G     QLGH T    + P  +F
Sbjct: 254 CGDDFSVFLTQEGGVFTCGLGTFGQLGHGTHGNEILPRMVF 294



 Score =  101 bits (251), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 86/294 (29%), Positives = 138/294 (46%), Gaps = 12/294 (4%)

Query: 110 SAGNMQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAH---V 165
           +A   Q   G  HTLL++ +  +++CG++  G LGH    T  +   R  F SA     V
Sbjct: 35  AANVQQAACGGSHTLLLTKDGKLYTCGNNDHGQLGHD---TNNLPNKRPQFISALENYIV 91

Query: 166 VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 225
            QVS   +H+  +   GQ+F+ G N++   GH         PR+++++      Q++ G 
Sbjct: 92  TQVSCGLSHSLALTNWGQLFSWGSNATGQLGHDLDMVSYPAPRMIKSIATKTVVQISCGH 151

Query: 226 NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDR-PTPKSIAPLEEVGSVVQIAAGPSYMLAV 284
           +    LT  G +   G+N +GQLG G T  + PT   +  L  +  +  IA G ++  AV
Sbjct: 152 SHCLALTNSGELFAWGANEYGQLGLGTTGKKVPTATLVKSLAGI-PIAFIACGGNHSFAV 210

Query: 285 TGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           + +G ++ +G  +   LG  +      P  ++T R  G+    +S GD+  V L   G V
Sbjct: 211 SKSGAIFGWGKNTFGQLGLNDLDSRCYPTQLKTLRSLGVRY--ISCGDDFSVFLTQEGGV 268

Query: 345 YTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVY 397
           +T G G  G LGHG   ++ LP  +  L      Q+ C RK     +   G VY
Sbjct: 269 FTCGLGTFGQLGHGTHGNEILPRMVFELMGSKITQIACGRKHTLAFVPSRGKVY 322



 Score = 91.3 bits (225), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 69/244 (28%), Positives = 117/244 (47%), Gaps = 9/244 (3%)

Query: 237 VHTCGSNTHGQLGHGDTLDRP--TPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 294
           ++  GS  HG+LG G   +    TP+ +    +  +V Q A G S+ L +T +G +Y+ G
Sbjct: 3   LYCWGSTVHGELGLGGIEEEQVMTPREM-DWSQAANVQQAACGGSHTLLLTKDGKLYTCG 61

Query: 295 SGSNFCLGHGEQH-DELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 353
           +  +  LGH   +    +P+ I     +   V +VS G  H +AL + G +++WG    G
Sbjct: 62  NNDHGQLGHDTNNLPNKRPQFISAL--ENYIVTQVSCGLSHSLALTNWGQLFSWGSNATG 119

Query: 354 ALGHG-DEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDR 412
            LGH  D +    P  + S+ +   VQ+         L ++G ++ +G   +G LG    
Sbjct: 120 QLGHDLDMVSYPAPRMIKSIATKTVVQISCGHSHCLALTNSGELFAWGANEYGQLGLGTT 179

Query: 413 GVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLE 472
           G   KV    ++ SL    ++ I+ G  H+  V+  G +FG+G N   QLG + L     
Sbjct: 180 G--KKVPTATLVKSLAGIPIAFIACGGNHSFAVSKSGAIFGWGKNTFGQLGLNDLDSRCY 237

Query: 473 PTEI 476
           PT++
Sbjct: 238 PTQL 241



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 62/203 (30%), Positives = 98/203 (48%), Gaps = 16/203 (7%)

Query: 102 HSSDIVETSAGNM----------QITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQ 150
           H  D+V   A  M          QI+ G  H L ++NS  +F+ G++  G LG G    +
Sbjct: 123 HDLDMVSYPAPRMIKSIATKTVVQISCGHSHCLALTNSGELFAWGANEYGQLGLGTTGKK 182

Query: 151 CVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLV 210
             + T +   +   +  ++   NH+  V +SG +F  G N+    G  D +   + P  +
Sbjct: 183 VPTATLVKSLAGIPIAFIACGGNHSFAVSKSGAIFGWGKNTFGQLGLNDLDSRCY-PTQL 241

Query: 211 EALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS 270
           + L+ +  + ++ G +F+ FLT  G V TCG  T GQLGHG   +   P+ +   E +GS
Sbjct: 242 KTLRSLGVRYISCGDDFSVFLTQEGGVFTCGLGTFGQLGHGTHGNEILPRMV--FELMGS 299

Query: 271 -VVQIAAGPSYMLA-VTGNGVVY 291
            + QIA G  + LA V   G VY
Sbjct: 300 KITQIACGRKHTLAFVPSRGKVY 322



 Score = 72.0 bits (175), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 57/195 (29%), Positives = 93/195 (47%), Gaps = 8/195 (4%)

Query: 290 VYSFGSGSNFCLGHG--EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 347
           +Y +GS  +  LG G  E+   + PR +     +  +V + + G  H + L   G +YT 
Sbjct: 3   LYCWGSTVHGELGLGGIEEEQVMTPREMD--WSQAANVQQAACGGSHTLLLTKDGKLYTC 60

Query: 348 GKGYCGALGHG-DEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGS 406
           G    G LGH  + +    P+ +S+L++++  QV      +  L + G ++ +G    G 
Sbjct: 61  GNNDHGQLGHDTNNLPNKRPQFISALENYIVTQVSCGLSHSLALTNWGQLFSWGSNATGQ 120

Query: 407 LGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDT 466
           LG     VS     PR++ S+    V QIS G  H + +T+ G LF +G NE  QLG  T
Sbjct: 121 LGHDLDMVSYPA--PRMIKSIATKTVVQISCGHSHCLALTNSGELFAWGANEYGQLGLGT 178

Query: 467 LRGCLEPTEIFIQEM 481
             G   PT   ++ +
Sbjct: 179 -TGKKVPTATLVKSL 192


>gi|50511409|gb|AAT77332.1| unknown prtein [Oryza sativa Japonica Group]
          Length = 901

 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 103/331 (31%), Positives = 162/331 (48%), Gaps = 24/331 (7%)

Query: 150 QCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPR 208
            C+    + F     V  +S    HA  V + G++++ G+ S    GH  D + P  +P+
Sbjct: 297 DCLIPKPLEFAVKLDVQNISCGGRHATLVTKQGEIYSWGEESGGRLGHGVDCDVP--QPK 354

Query: 209 LVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSI-APL 265
           L++AL  +  + V  G   T  +T+ G ++T G+ T   G LGHG+ +    PK +  PL
Sbjct: 355 LIDALANMNIELVACGEYHTCAVTLSGDLYTWGNGTSNSGLLGHGNEVSHWVPKRVNGPL 414

Query: 266 EEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHV 325
           E +  V  I+ GP +   VT  G +++FG GS   LGHG++     PR +++   KG+  
Sbjct: 415 EGI-HVSAISCGPWHTAIVTSAGQLFTFGDGSFGVLGHGDRQSLSVPREVESL--KGLRT 471

Query: 326 VRVSAGDEHVVAL------------DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
           VR + G  H  A+             SSG ++TWG G  G LGHGD+  + +P  +++L 
Sbjct: 472 VRAACGVWHTAAVVEVMVGNSSSSNCSSGKIFTWGDGDKGRLGHGDKDTRLVPTCVAALV 531

Query: 374 SHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVS 433
                Q+      T  L  +G VY  G   +G LG P    +D +L  R+   L  + V 
Sbjct: 532 EPNFCQIACGHCMTVALTTSGHVYTMGSPVYGQLGNPQ---ADGMLPVRVEGKLHKNFVE 588

Query: 434 QISTGLYHTVVVTDRGRLFGFGDNERAQLGH 464
           +IS G YH  V+T R  ++ +G     +LGH
Sbjct: 589 EISCGAYHVAVLTSRTEVYTWGKGANGRLGH 619



 Score =  120 bits (301), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 100/281 (35%), Positives = 134/281 (47%), Gaps = 24/281 (8%)

Query: 112 GNMQI---TTGRYHTLLISNSS---VFSCGSSLCGVLGHGPETTQCVSFTRINFP-SAAH 164
            NM I     G YHT  ++ S     +  G+S  G+LGHG E +  V   R+N P    H
Sbjct: 360 ANMNIELVACGEYHTCAVTLSGDLYTWGNGTSNSGLLGHGNEVSHWVP-KRVNGPLEGIH 418

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V  +S    H A V  +GQ+FT GD S    GH D  + +  PR VE+LKG+   +   G
Sbjct: 419 VSAISCGPWHTAIVTSAGQLFTFGDGSFGVLGHGD-RQSLSVPREVESLKGLRTVRAACG 477

Query: 225 LNFTGFLT------------IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV 272
           +  T  +               G + T G    G+LGHGD   R  P  +A L E  +  
Sbjct: 478 VWHTAAVVEVMVGNSSSSNCSSGKIFTWGDGDKGRLGHGDKDTRLVPTCVAALVEP-NFC 536

Query: 273 QIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGD 332
           QIA G    +A+T +G VY+ GS     LG+  Q D + P  ++    K   V  +S G 
Sbjct: 537 QIACGHCMTVALTTSGHVYTMGSPVYGQLGN-PQADGMLPVRVEGKLHKNF-VEEISCGA 594

Query: 333 EHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
            HV  L S   VYTWGKG  G LGHGD  D++ P  + +LK
Sbjct: 595 YHVAVLTSRTEVYTWGKGANGRLGHGDTDDRSSPTLVEALK 635



 Score = 92.0 bits (227), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 69/222 (31%), Positives = 105/222 (47%), Gaps = 26/222 (11%)

Query: 271 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 330
           V  I+ G  +   VT  G +YS+G  S   LGHG   D  QP+ I       I +V  + 
Sbjct: 312 VQNISCGGRHATLVTKQGEIYSWGEESGGRLGHGVDCDVPQPKLIDALANMNIELV--AC 369

Query: 331 GDEHVVALDSSGYVYTWGKGYC--GALGHGDEIDKTLPE----PLSSLKSHLAVQVCARK 384
           G+ H  A+  SG +YTWG G    G LGHG+E+   +P+    PL  +  H++   C   
Sbjct: 370 GEYHTCAVTLSGDLYTWGNGTSNSGLLGHGNEVSHWVPKRVNGPLEGI--HVSAISCG-P 426

Query: 385 RKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV 444
             T ++   G ++ FG   FG LG  DR     +  PR ++SL+     + + G++HT  
Sbjct: 427 WHTAIVTSAGQLFTFGDGSFGVLGHGDR---QSLSVPREVESLKGLRTVRAACGVWHTAA 483

Query: 445 VTD------------RGRLFGFGDNERAQLGHDTLRGCLEPT 474
           V +             G++F +GD ++ +LGH      L PT
Sbjct: 484 VVEVMVGNSSSSNCSSGKIFTWGDGDKGRLGHGDKDTRLVPT 525



 Score = 76.6 bits (187), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 67/230 (29%), Positives = 105/230 (45%), Gaps = 28/230 (12%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSASEN 173
           I+ G +HT +++++  +F+ G    GVLGHG    Q +S  R +        V+ +    
Sbjct: 422 ISCGPWHTAIVTSAGQLFTFGDGSFGVLGHGDR--QSLSVPREVESLKGLRTVRAACGVW 479

Query: 174 HAAFVLQ------------SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQV 221
           H A V++            SG++FT GD      GH D +  +  P  V AL      Q+
Sbjct: 480 HTAAVVEVMVGNSSSSNCSSGKIFTWGDGDKGRLGHGDKDTRLV-PTCVAALVEPNFCQI 538

Query: 222 TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS-----VVQIAA 276
             G   T  LT  GHV+T GS  +GQLG+      P    + P+   G      V +I+ 
Sbjct: 539 ACGHCMTVALTTSGHVYTMGSPVYGQLGN------PQADGMLPVRVEGKLHKNFVEEISC 592

Query: 277 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVV 326
           G  ++  +T    VY++G G+N  LGHG+  D   P  ++  + K +  V
Sbjct: 593 GAYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRSSPTLVEALKDKQVRTV 642



 Score = 69.3 bits (168), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 56/175 (32%), Positives = 83/175 (47%), Gaps = 6/175 (3%)

Query: 304 GEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK 363
           G   D L P+ ++ F  K + V  +S G  H   +   G +Y+WG+   G LGHG + D 
Sbjct: 293 GVNMDCLIPKPLE-FAVK-LDVQNISCGGRHATLVTKQGEIYSWGEESGGRLGHGVDCDV 350

Query: 364 TLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRG--VSDKVLRP 421
             P+ + +L +     V   +  T  +  +G +Y +G  G  + G    G  VS  V + 
Sbjct: 351 PQPKLIDALANMNIELVACGEYHTCAVTLSGDLYTWG-NGTSNSGLLGHGNEVSHWVPK- 408

Query: 422 RILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 476
           R+   L   HVS IS G +HT +VT  G+LF FGD     LGH   +    P E+
Sbjct: 409 RVNGPLEGIHVSAISCGPWHTAIVTSAGQLFTFGDGSFGVLGHGDRQSLSVPREV 463



 Score = 47.8 bits (112), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 48/193 (24%), Positives = 84/193 (43%), Gaps = 10/193 (5%)

Query: 92  RVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQC 151
           R +R    V H++ +VE       +  G   +   S+  +F+ G    G LGHG + T+ 
Sbjct: 470 RTVRAACGVWHTAAVVE-------VMVGNSSSSNCSSGKIFTWGDGDKGRLGHGDKDTRL 522

Query: 152 VSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVE 211
           V  T +      +  Q++        +  SG V+T G       G+   +  +   R+  
Sbjct: 523 VP-TCVAALVEPNFCQIACGHCMTVALTTSGHVYTMGSPVYGQLGNPQADG-MLPVRVEG 580

Query: 212 ALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSV 271
            L     ++++ G      LT R  V+T G   +G+LGHGDT DR +P  +  L++   V
Sbjct: 581 KLHKNFVEEISCGAYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRSSPTLVEALKD-KQV 639

Query: 272 VQIAAGPSYMLAV 284
             +  G ++  A+
Sbjct: 640 RTVVCGINFTAAI 652



 Score = 42.0 bits (97), Expect = 0.77,   Method: Compositional matrix adjust.
 Identities = 37/124 (29%), Positives = 57/124 (45%), Gaps = 3/124 (2%)

Query: 115 QITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
           QI  G   T+ ++ S  V++ GS + G LG+ P+    +            V ++S    
Sbjct: 537 QIACGHCMTVALTTSGHVYTMGSPVYGQLGN-PQADGMLPVRVEGKLHKNFVEEISCGAY 595

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
           H A +    +V+T G  ++   GH DT+     P LVEALK    + V  G+NFT  + I
Sbjct: 596 HVAVLTSRTEVYTWGKGANGRLGHGDTDD-RSSPTLVEALKDKQVRTVVCGINFTAAICI 654

Query: 234 RGHV 237
              V
Sbjct: 655 HKWV 658


>gi|222631437|gb|EEE63569.1| hypothetical protein OsJ_18386 [Oryza sativa Japonica Group]
          Length = 1132

 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 103/330 (31%), Positives = 162/330 (49%), Gaps = 24/330 (7%)

Query: 151 CVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRL 209
           C+    + F     V  +S    HA  V + G++++ G+ S    GH  D + P  +P+L
Sbjct: 344 CLIPKPLEFAVKLDVQNISCGGRHATLVTKQGEIYSWGEESGGRLGHGVDCDVP--QPKL 401

Query: 210 VEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSI-APLE 266
           ++AL  +  + V  G   T  +T+ G ++T G+ T   G LGHG+ +    PK +  PLE
Sbjct: 402 IDALANMNIELVACGEYHTCAVTLSGDLYTWGNGTSNSGLLGHGNEVSHWVPKRVNGPLE 461

Query: 267 EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVV 326
            +  V  I+ GP +   VT  G +++FG GS   LGHG++     PR +++   KG+  V
Sbjct: 462 GI-HVSAISCGPWHTAIVTSAGQLFTFGDGSFGVLGHGDRQSLSVPREVESL--KGLRTV 518

Query: 327 RVSAGDEHVVAL------------DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKS 374
           R + G  H  A+             SSG ++TWG G  G LGHGD+  + +P  +++L  
Sbjct: 519 RAACGVWHTAAVVEVMVGNSSSSNCSSGKIFTWGDGDKGRLGHGDKDTRLVPTCVAALVE 578

Query: 375 HLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQ 434
               Q+      T  L  +G VY  G   +G LG P    +D +L  R+   L  + V +
Sbjct: 579 PNFCQIACGHCMTVALTTSGHVYTMGSPVYGQLGNPQ---ADGMLPVRVEGKLHKNFVEE 635

Query: 435 ISTGLYHTVVVTDRGRLFGFGDNERAQLGH 464
           IS G YH  V+T R  ++ +G     +LGH
Sbjct: 636 ISCGAYHVAVLTSRTEVYTWGKGANGRLGH 665



 Score =  120 bits (301), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 100/281 (35%), Positives = 134/281 (47%), Gaps = 24/281 (8%)

Query: 112 GNMQI---TTGRYHTLLISNSS---VFSCGSSLCGVLGHGPETTQCVSFTRINFP-SAAH 164
            NM I     G YHT  ++ S     +  G+S  G+LGHG E +  V   R+N P    H
Sbjct: 406 ANMNIELVACGEYHTCAVTLSGDLYTWGNGTSNSGLLGHGNEVSHWVP-KRVNGPLEGIH 464

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V  +S    H A V  +GQ+FT GD S    GH D  + +  PR VE+LKG+   +   G
Sbjct: 465 VSAISCGPWHTAIVTSAGQLFTFGDGSFGVLGHGD-RQSLSVPREVESLKGLRTVRAACG 523

Query: 225 LNFTGFLT------------IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV 272
           +  T  +               G + T G    G+LGHGD   R  P  +A L E  +  
Sbjct: 524 VWHTAAVVEVMVGNSSSSNCSSGKIFTWGDGDKGRLGHGDKDTRLVPTCVAALVEP-NFC 582

Query: 273 QIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGD 332
           QIA G    +A+T +G VY+ GS     LG+  Q D + P  ++    K   V  +S G 
Sbjct: 583 QIACGHCMTVALTTSGHVYTMGSPVYGQLGN-PQADGMLPVRVEGKLHKNF-VEEISCGA 640

Query: 333 EHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
            HV  L S   VYTWGKG  G LGHGD  D++ P  + +LK
Sbjct: 641 YHVAVLTSRTEVYTWGKGANGRLGHGDTDDRSSPTLVEALK 681



 Score = 92.0 bits (227), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 69/222 (31%), Positives = 105/222 (47%), Gaps = 26/222 (11%)

Query: 271 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 330
           V  I+ G  +   VT  G +YS+G  S   LGHG   D  QP+ I       I +V  + 
Sbjct: 358 VQNISCGGRHATLVTKQGEIYSWGEESGGRLGHGVDCDVPQPKLIDALANMNIELV--AC 415

Query: 331 GDEHVVALDSSGYVYTWGKGYC--GALGHGDEIDKTLPE----PLSSLKSHLAVQVCARK 384
           G+ H  A+  SG +YTWG G    G LGHG+E+   +P+    PL  +  H++   C   
Sbjct: 416 GEYHTCAVTLSGDLYTWGNGTSNSGLLGHGNEVSHWVPKRVNGPLEGI--HVSAISCG-P 472

Query: 385 RKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV 444
             T ++   G ++ FG   FG LG  DR     +  PR ++SL+     + + G++HT  
Sbjct: 473 WHTAIVTSAGQLFTFGDGSFGVLGHGDR---QSLSVPREVESLKGLRTVRAACGVWHTAA 529

Query: 445 VTD------------RGRLFGFGDNERAQLGHDTLRGCLEPT 474
           V +             G++F +GD ++ +LGH      L PT
Sbjct: 530 VVEVMVGNSSSSNCSSGKIFTWGDGDKGRLGHGDKDTRLVPT 571



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 67/230 (29%), Positives = 105/230 (45%), Gaps = 28/230 (12%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSASEN 173
           I+ G +HT +++++  +F+ G    GVLGHG    Q +S  R +        V+ +    
Sbjct: 468 ISCGPWHTAIVTSAGQLFTFGDGSFGVLGHG--DRQSLSVPREVESLKGLRTVRAACGVW 525

Query: 174 HAAFVLQ------------SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQV 221
           H A V++            SG++FT GD      GH D +  +  P  V AL      Q+
Sbjct: 526 HTAAVVEVMVGNSSSSNCSSGKIFTWGDGDKGRLGHGDKDTRLV-PTCVAALVEPNFCQI 584

Query: 222 TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS-----VVQIAA 276
             G   T  LT  GHV+T GS  +GQLG+      P    + P+   G      V +I+ 
Sbjct: 585 ACGHCMTVALTTSGHVYTMGSPVYGQLGN------PQADGMLPVRVEGKLHKNFVEEISC 638

Query: 277 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVV 326
           G  ++  +T    VY++G G+N  LGHG+  D   P  ++  + K +  V
Sbjct: 639 GAYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRSSPTLVEALKDKQVRTV 688



 Score = 68.6 bits (166), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 56/175 (32%), Positives = 83/175 (47%), Gaps = 6/175 (3%)

Query: 304 GEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK 363
           G   D L P+ ++ F  K + V  +S G  H   +   G +Y+WG+   G LGHG + D 
Sbjct: 339 GVNMDCLIPKPLE-FAVK-LDVQNISCGGRHATLVTKQGEIYSWGEESGGRLGHGVDCDV 396

Query: 364 TLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRG--VSDKVLRP 421
             P+ + +L +     V   +  T  +  +G +Y +G  G  + G    G  VS  V + 
Sbjct: 397 PQPKLIDALANMNIELVACGEYHTCAVTLSGDLYTWG-NGTSNSGLLGHGNEVSHWVPK- 454

Query: 422 RILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 476
           R+   L   HVS IS G +HT +VT  G+LF FGD     LGH   +    P E+
Sbjct: 455 RVNGPLEGIHVSAISCGPWHTAIVTSAGQLFTFGDGSFGVLGHGDRQSLSVPREV 509



 Score = 47.4 bits (111), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 48/193 (24%), Positives = 84/193 (43%), Gaps = 10/193 (5%)

Query: 92  RVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQC 151
           R +R    V H++ +VE       +  G   +   S+  +F+ G    G LGHG + T+ 
Sbjct: 516 RTVRAACGVWHTAAVVE-------VMVGNSSSSNCSSGKIFTWGDGDKGRLGHGDKDTRL 568

Query: 152 VSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVE 211
           V  T +      +  Q++        +  SG V+T G       G+   +  +   R+  
Sbjct: 569 VP-TCVAALVEPNFCQIACGHCMTVALTTSGHVYTMGSPVYGQLGNPQADG-MLPVRVEG 626

Query: 212 ALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSV 271
            L     ++++ G      LT R  V+T G   +G+LGHGDT DR +P  +  L++   V
Sbjct: 627 KLHKNFVEEISCGAYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRSSPTLVEALKD-KQV 685

Query: 272 VQIAAGPSYMLAV 284
             +  G ++  A+
Sbjct: 686 RTVVCGINFTAAI 698



 Score = 42.4 bits (98), Expect = 0.54,   Method: Compositional matrix adjust.
 Identities = 38/127 (29%), Positives = 57/127 (44%), Gaps = 9/127 (7%)

Query: 115 QITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAH---VVQVSA 170
           QI  G   T+ ++ S  V++ GS + G LG+     Q      +      H   V ++S 
Sbjct: 583 QIACGHCMTVALTTSGHVYTMGSPVYGQLGN----PQADGMLPVRVEGKLHKNFVEEISC 638

Query: 171 SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
              H A +    +V+T G  ++   GH DT+     P LVEALK    + V  G+NFT  
Sbjct: 639 GAYHVAVLTSRTEVYTWGKGANGRLGHGDTDD-RSSPTLVEALKDKQVRTVVCGINFTAA 697

Query: 231 LTIRGHV 237
           + I   V
Sbjct: 698 ICIHKWV 704


>gi|357126800|ref|XP_003565075.1| PREDICTED: uncharacterized protein LOC100834588 [Brachypodium
           distachyon]
          Length = 1092

 Score =  139 bits (351), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 104/339 (30%), Positives = 163/339 (48%), Gaps = 22/339 (6%)

Query: 151 CVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLV 210
           C+    + F     V  +S    HAA V + G++++ G+ S    GH   +  +  P+L+
Sbjct: 301 CLVPKPLEFAVRLDVQNISCGGKHAALVSKQGEIYSWGEESGGRLGH-GVDCDVAHPKLI 359

Query: 211 EALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSI-APLEE 267
           +AL  +  + V  G   T  +T+ G ++T G  T   G LGHG+ +    PK +  PLE 
Sbjct: 360 DALTHMNIELVACGEYHTCAVTLSGDLYTWGDGTFKFGLLGHGNDISHWVPKKLHGPLEG 419

Query: 268 VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVR 327
           +  V  I+ GP + + VT  G +++FG GS   LGHG++     P+ +++   KG+  VR
Sbjct: 420 I-HVSSISCGPFHTVIVTSAGQLFTFGDGSFGVLGHGDRESLSVPKEVESL--KGLRTVR 476

Query: 328 VSAGDEHVVAL------------DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSH 375
            + G  H  A+             SSG ++TWG G  G LGHGD+  + +P  +++L   
Sbjct: 477 AACGVWHTAAVVEVMAGNSSSSNCSSGKIFTWGDGDKGRLGHGDKESRLVPTCVAALVEP 536

Query: 376 LAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQI 435
              QV      T  L  +G VY  G   +G LG P    +D +L  R+   L  + V +I
Sbjct: 537 NFCQVACGHCLTVALTTSGHVYTMGSAVYGQLGNPQ---ADGMLPARVEGKLHKNFVEEI 593

Query: 436 STGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPT 474
           S G YH  V+T R  ++ +G     +LGH        PT
Sbjct: 594 SCGAYHVAVLTSRTEVYTWGKGANGRLGHGNTDDKNTPT 632



 Score =  109 bits (272), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 90/274 (32%), Positives = 128/274 (46%), Gaps = 21/274 (7%)

Query: 116 ITTGRYHTLLISNSS---VFSCGSSLCGVLGHGPETTQCVSFTRINFP-SAAHVVQVSAS 171
           +  G YHT  ++ S     +  G+   G+LGHG + +  V   +++ P    HV  +S  
Sbjct: 370 VACGEYHTCAVTLSGDLYTWGDGTFKFGLLGHGNDISHWVP-KKLHGPLEGIHVSSISCG 428

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
             H   V  +GQ+FT GD S    GH D    +  P+ VE+LKG+   +   G+  T  +
Sbjct: 429 PFHTVIVTSAGQLFTFGDGSFGVLGHGD-RESLSVPKEVESLKGLRTVRAACGVWHTAAV 487

Query: 232 T------------IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPS 279
                          G + T G    G+LGHGD   R  P  +A L E  +  Q+A G  
Sbjct: 488 VEVMAGNSSSSNCSSGKIFTWGDGDKGRLGHGDKESRLVPTCVAALVEP-NFCQVACGHC 546

Query: 280 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 339
             +A+T +G VY+ GS     LG+  Q D + P  ++    K   V  +S G  HV  L 
Sbjct: 547 LTVALTTSGHVYTMGSAVYGQLGN-PQADGMLPARVEGKLHKNF-VEEISCGAYHVAVLT 604

Query: 340 SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
           S   VYTWGKG  G LGHG+  DK  P  + +LK
Sbjct: 605 SRTEVYTWGKGANGRLGHGNTDDKNTPTLVEALK 638



 Score = 75.1 bits (183), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 65/224 (29%), Positives = 101/224 (45%), Gaps = 16/224 (7%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           I+ G +HT++++++  +F+ G    GVLGHG   +  V    +        V+ +    H
Sbjct: 425 ISCGPFHTVIVTSAGQLFTFGDGSFGVLGHGDRESLSVP-KEVESLKGLRTVRAACGVWH 483

Query: 175 AAFVLQ------------SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 222
            A V++            SG++FT GD      GH D    +  P  V AL      QV 
Sbjct: 484 TAAVVEVMAGNSSSSNCSSGKIFTWGDGDKGRLGHGDKESRLV-PTCVAALVEPNFCQVA 542

Query: 223 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 282
            G   T  LT  GHV+T GS  +GQLG+    D   P  +        V +I+ G  ++ 
Sbjct: 543 CGHCLTVALTTSGHVYTMGSAVYGQLGNPQA-DGMLPARVEGKLHKNFVEEISCGAYHVA 601

Query: 283 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVV 326
            +T    VY++G G+N  LGHG   D+  P  ++  + K +  V
Sbjct: 602 VLTSRTEVYTWGKGANGRLGHGNTDDKNTPTLVEALKDKQVRNV 645



 Score = 72.8 bits (177), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 56/174 (32%), Positives = 89/174 (51%), Gaps = 8/174 (4%)

Query: 306 QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTL 365
           + D L P+ ++   R  + V  +S G +H   +   G +Y+WG+   G LGHG + D   
Sbjct: 298 KMDCLVPKPLEFAVR--LDVQNISCGGKHAALVSKQGEIYSWGEESGGRLGHGVDCDVAH 355

Query: 366 PEPLSSLKSHLAVQVCA-RKRKTFVLVDTGSVY--GFGWMGFGSLGFPDRGVSDKVLRPR 422
           P+ + +L +H+ +++ A  +  T  +  +G +Y  G G   FG LG  +  +S  V + +
Sbjct: 356 PKLIDAL-THMNIELVACGEYHTCAVTLSGDLYTWGDGTFKFGLLGHGN-DISHWVPK-K 412

Query: 423 ILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 476
           +   L   HVS IS G +HTV+VT  G+LF FGD     LGH        P E+
Sbjct: 413 LHGPLEGIHVSSISCGPFHTVIVTSAGQLFTFGDGSFGVLGHGDRESLSVPKEV 466



 Score = 47.0 bits (110), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 49/193 (25%), Positives = 85/193 (44%), Gaps = 10/193 (5%)

Query: 92  RVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQC 151
           R +R    V H++ +VE  AGN   +         S+  +F+ G    G LGHG + ++ 
Sbjct: 473 RTVRAACGVWHTAAVVEVMAGNSSSSN-------CSSGKIFTWGDGDKGRLGHGDKESRL 525

Query: 152 VSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVE 211
           V  T +      +  QV+        +  SG V+T G       G+   +  +   R+  
Sbjct: 526 VP-TCVAALVEPNFCQVACGHCLTVALTTSGHVYTMGSAVYGQLGNPQAD-GMLPARVEG 583

Query: 212 ALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSV 271
            L     ++++ G      LT R  V+T G   +G+LGHG+T D+ TP  +  L++   V
Sbjct: 584 KLHKNFVEEISCGAYHVAVLTSRTEVYTWGKGANGRLGHGNTDDKNTPTLVEALKD-KQV 642

Query: 272 VQIAAGPSYMLAV 284
             +  G ++  A+
Sbjct: 643 RNVVCGTNFTAAI 655



 Score = 38.9 bits (89), Expect = 6.1,   Method: Compositional matrix adjust.
 Identities = 34/120 (28%), Positives = 56/120 (46%), Gaps = 3/120 (2%)

Query: 115 QITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
           Q+  G   T+ ++ S  V++ GS++ G LG+ P+    +            V ++S    
Sbjct: 540 QVACGHCLTVALTTSGHVYTMGSAVYGQLGN-PQADGMLPARVEGKLHKNFVEEISCGAY 598

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
           H A +    +V+T G  ++   GH +T+     P LVEALK    + V  G NFT  + I
Sbjct: 599 HVAVLTSRTEVYTWGKGANGRLGHGNTDDK-NTPTLVEALKDKQVRNVVCGTNFTAAICI 657


>gi|115463633|ref|NP_001055416.1| Os05g0384800 [Oryza sativa Japonica Group]
 gi|113578967|dbj|BAF17330.1| Os05g0384800 [Oryza sativa Japonica Group]
          Length = 1086

 Score =  139 bits (351), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 103/330 (31%), Positives = 162/330 (49%), Gaps = 24/330 (7%)

Query: 151 CVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRL 209
           C+    + F     V  +S    HA  V + G++++ G+ S    GH  D + P  +P+L
Sbjct: 298 CLIPKPLEFAVKLDVQNISCGGRHATLVTKQGEIYSWGEESGGRLGHGVDCDVP--QPKL 355

Query: 210 VEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSI-APLE 266
           ++AL  +  + V  G   T  +T+ G ++T G+ T   G LGHG+ +    PK +  PLE
Sbjct: 356 IDALANMNIELVACGEYHTCAVTLSGDLYTWGNGTSNSGLLGHGNEVSHWVPKRVNGPLE 415

Query: 267 EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVV 326
            +  V  I+ GP +   VT  G +++FG GS   LGHG++     PR +++   KG+  V
Sbjct: 416 GI-HVSAISCGPWHTAIVTSAGQLFTFGDGSFGVLGHGDRQSLSVPREVESL--KGLRTV 472

Query: 327 RVSAGDEHVVAL------------DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKS 374
           R + G  H  A+             SSG ++TWG G  G LGHGD+  + +P  +++L  
Sbjct: 473 RAACGVWHTAAVVEVMVGNSSSSNCSSGKIFTWGDGDKGRLGHGDKDTRLVPTCVAALVE 532

Query: 375 HLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQ 434
               Q+      T  L  +G VY  G   +G LG P    +D +L  R+   L  + V +
Sbjct: 533 PNFCQIACGHCMTVALTTSGHVYTMGSPVYGQLGNPQ---ADGMLPVRVEGKLHKNFVEE 589

Query: 435 ISTGLYHTVVVTDRGRLFGFGDNERAQLGH 464
           IS G YH  V+T R  ++ +G     +LGH
Sbjct: 590 ISCGAYHVAVLTSRTEVYTWGKGANGRLGH 619



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 100/281 (35%), Positives = 134/281 (47%), Gaps = 24/281 (8%)

Query: 112 GNMQI---TTGRYHTLLISNSS---VFSCGSSLCGVLGHGPETTQCVSFTRINFP-SAAH 164
            NM I     G YHT  ++ S     +  G+S  G+LGHG E +  V   R+N P    H
Sbjct: 360 ANMNIELVACGEYHTCAVTLSGDLYTWGNGTSNSGLLGHGNEVSHWVP-KRVNGPLEGIH 418

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V  +S    H A V  +GQ+FT GD S    GH D  + +  PR VE+LKG+   +   G
Sbjct: 419 VSAISCGPWHTAIVTSAGQLFTFGDGSFGVLGHGD-RQSLSVPREVESLKGLRTVRAACG 477

Query: 225 LNFTGFLT------------IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV 272
           +  T  +               G + T G    G+LGHGD   R  P  +A L E  +  
Sbjct: 478 VWHTAAVVEVMVGNSSSSNCSSGKIFTWGDGDKGRLGHGDKDTRLVPTCVAALVEP-NFC 536

Query: 273 QIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGD 332
           QIA G    +A+T +G VY+ GS     LG+  Q D + P  ++    K   V  +S G 
Sbjct: 537 QIACGHCMTVALTTSGHVYTMGSPVYGQLGN-PQADGMLPVRVEGKLHKNF-VEEISCGA 594

Query: 333 EHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
            HV  L S   VYTWGKG  G LGHGD  D++ P  + +LK
Sbjct: 595 YHVAVLTSRTEVYTWGKGANGRLGHGDTDDRSSPTLVEALK 635



 Score = 92.0 bits (227), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 69/222 (31%), Positives = 105/222 (47%), Gaps = 26/222 (11%)

Query: 271 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 330
           V  I+ G  +   VT  G +YS+G  S   LGHG   D  QP+ I       I +V  + 
Sbjct: 312 VQNISCGGRHATLVTKQGEIYSWGEESGGRLGHGVDCDVPQPKLIDALANMNIELV--AC 369

Query: 331 GDEHVVALDSSGYVYTWGKGYC--GALGHGDEIDKTLPE----PLSSLKSHLAVQVCARK 384
           G+ H  A+  SG +YTWG G    G LGHG+E+   +P+    PL  +  H++   C   
Sbjct: 370 GEYHTCAVTLSGDLYTWGNGTSNSGLLGHGNEVSHWVPKRVNGPLEGI--HVSAISCG-P 426

Query: 385 RKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV 444
             T ++   G ++ FG   FG LG  DR     +  PR ++SL+     + + G++HT  
Sbjct: 427 WHTAIVTSAGQLFTFGDGSFGVLGHGDR---QSLSVPREVESLKGLRTVRAACGVWHTAA 483

Query: 445 VTD------------RGRLFGFGDNERAQLGHDTLRGCLEPT 474
           V +             G++F +GD ++ +LGH      L PT
Sbjct: 484 VVEVMVGNSSSSNCSSGKIFTWGDGDKGRLGHGDKDTRLVPT 525



 Score = 85.5 bits (210), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 87/347 (25%), Positives = 145/347 (41%), Gaps = 33/347 (9%)

Query: 119 GRYHTLLISNSSVFSCGSSLCGVLGHG-----PETTQCVSFTRINFPSAAHVVQVSASEN 173
           GR+ TL+     ++S G    G LGHG     P+     +   +N      +  V+  E 
Sbjct: 319 GRHATLVTKQGEIYSWGEESGGRLGHGVDCDVPQPKLIDALANMN------IELVACGEY 372

Query: 174 HAAFVLQSGQVFTCGDNSSFC--CGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
           H   V  SG ++T G+ +S     GH +        R+   L+G+    ++ G   T  +
Sbjct: 373 HTCAVTLSGDLYTWGNGTSNSGLLGHGNEVSHWVPKRVNGPLEGIHVSAISCGPWHTAIV 432

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT------ 285
           T  G + T G  + G LGHGD      P+ +  L+ +   V+ A G  +  AV       
Sbjct: 433 TSAGQLFTFGDGSFGVLGHGDRQSLSVPREVESLKGL-RTVRAACGVWHTAAVVEVMVGN 491

Query: 286 ------GNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 339
                  +G ++++G G    LGHG++   L P  +        +  +++ G    VAL 
Sbjct: 492 SSSSNCSSGKIFTWGDGDKGRLGHGDKDTRLVPTCVAALVEP--NFCQIACGHCMTVALT 549

Query: 340 SSGYVYTWGKGYCGALGHGDEIDKTLPEPLS-SLKSHLAVQVCARKRKTFVLVDTGSVYG 398
           +SG+VYT G    G LG+  + D  LP  +   L  +   ++        VL     VY 
Sbjct: 550 TSGHVYTMGSPVYGQLGN-PQADGMLPVRVEGKLHKNFVEEISCGAYHVAVLTSRTEVYT 608

Query: 399 FGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVV 445
           +G    G LG  D   +D    P ++++L+   V  +  G+  T  +
Sbjct: 609 WGKGANGRLGHGD---TDDRSSPTLVEALKDKQVRTVVCGINFTAAI 652



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 67/230 (29%), Positives = 105/230 (45%), Gaps = 28/230 (12%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSASEN 173
           I+ G +HT +++++  +F+ G    GVLGHG    Q +S  R +        V+ +    
Sbjct: 422 ISCGPWHTAIVTSAGQLFTFGDGSFGVLGHG--DRQSLSVPREVESLKGLRTVRAACGVW 479

Query: 174 HAAFVLQ------------SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQV 221
           H A V++            SG++FT GD      GH D +  +  P  V AL      Q+
Sbjct: 480 HTAAVVEVMVGNSSSSNCSSGKIFTWGDGDKGRLGHGDKDTRLV-PTCVAALVEPNFCQI 538

Query: 222 TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS-----VVQIAA 276
             G   T  LT  GHV+T GS  +GQLG+      P    + P+   G      V +I+ 
Sbjct: 539 ACGHCMTVALTTSGHVYTMGSPVYGQLGN------PQADGMLPVRVEGKLHKNFVEEISC 592

Query: 277 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVV 326
           G  ++  +T    VY++G G+N  LGHG+  D   P  ++  + K +  V
Sbjct: 593 GAYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRSSPTLVEALKDKQVRTV 642



 Score = 68.6 bits (166), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 56/175 (32%), Positives = 83/175 (47%), Gaps = 6/175 (3%)

Query: 304 GEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK 363
           G   D L P+ ++ F  K + V  +S G  H   +   G +Y+WG+   G LGHG + D 
Sbjct: 293 GVNMDCLIPKPLE-FAVK-LDVQNISCGGRHATLVTKQGEIYSWGEESGGRLGHGVDCDV 350

Query: 364 TLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRG--VSDKVLRP 421
             P+ + +L +     V   +  T  +  +G +Y +G  G  + G    G  VS  V + 
Sbjct: 351 PQPKLIDALANMNIELVACGEYHTCAVTLSGDLYTWG-NGTSNSGLLGHGNEVSHWVPK- 408

Query: 422 RILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 476
           R+   L   HVS IS G +HT +VT  G+LF FGD     LGH   +    P E+
Sbjct: 409 RVNGPLEGIHVSAISCGPWHTAIVTSAGQLFTFGDGSFGVLGHGDRQSLSVPREV 463



 Score = 47.4 bits (111), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 48/193 (24%), Positives = 84/193 (43%), Gaps = 10/193 (5%)

Query: 92  RVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQC 151
           R +R    V H++ +VE       +  G   +   S+  +F+ G    G LGHG + T+ 
Sbjct: 470 RTVRAACGVWHTAAVVE-------VMVGNSSSSNCSSGKIFTWGDGDKGRLGHGDKDTRL 522

Query: 152 VSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVE 211
           V  T +      +  Q++        +  SG V+T G       G+   +  +   R+  
Sbjct: 523 VP-TCVAALVEPNFCQIACGHCMTVALTTSGHVYTMGSPVYGQLGNPQADG-MLPVRVEG 580

Query: 212 ALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSV 271
            L     ++++ G      LT R  V+T G   +G+LGHGDT DR +P  +  L++   V
Sbjct: 581 KLHKNFVEEISCGAYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRSSPTLVEALKD-KQV 639

Query: 272 VQIAAGPSYMLAV 284
             +  G ++  A+
Sbjct: 640 RTVVCGINFTAAI 652



 Score = 42.4 bits (98), Expect = 0.59,   Method: Compositional matrix adjust.
 Identities = 38/127 (29%), Positives = 57/127 (44%), Gaps = 9/127 (7%)

Query: 115 QITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAH---VVQVSA 170
           QI  G   T+ ++ S  V++ GS + G LG+     Q      +      H   V ++S 
Sbjct: 537 QIACGHCMTVALTTSGHVYTMGSPVYGQLGN----PQADGMLPVRVEGKLHKNFVEEISC 592

Query: 171 SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
              H A +    +V+T G  ++   GH DT+     P LVEALK    + V  G+NFT  
Sbjct: 593 GAYHVAVLTSRTEVYTWGKGANGRLGHGDTDD-RSSPTLVEALKDKQVRTVVCGINFTAA 651

Query: 231 LTIRGHV 237
           + I   V
Sbjct: 652 ICIHKWV 658


>gi|325183095|emb|CCA17552.1| regulator of chromosome condensation (RCC1)like protein putative
           [Albugo laibachii Nc14]
          Length = 545

 Score =  139 bits (351), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 101/348 (29%), Positives = 170/348 (48%), Gaps = 9/348 (2%)

Query: 130 SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGD 189
           +V++ G    G LG G  + Q      +        VQ+S    H   +   G+V+T G 
Sbjct: 2   TVYTWGRGEDGQLGLGDTSDQYHPIL-VEALQDRQTVQISCGSGHTVVLTDDGKVYTWGR 60

Query: 190 NSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLG 249
                 GH D N   F PRLVE L+    +QVT G   T  +T+ G ++T G   +G+LG
Sbjct: 61  GDDGRLGHGD-NGWKFVPRLVEDLRDKKVRQVTCGSYHTAAVTVSGELYTWGGGMYGKLG 119

Query: 250 HGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH-D 308
           HG+     TP  +  ++ +  V Q+A G  + + +  N  VY++G   N   GHG+    
Sbjct: 120 HGNENGHSTPSLVESIKGL-YVRQVACGSRHTVVLLENQDVYTWGDKENGVSGHGDTSGH 178

Query: 309 ELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEP 368
           +  P  +       I++ ++SA   H  AL  +G V+T+G+G  G LGH  E ++ + + 
Sbjct: 179 QYSPYCVSELVE--INIKQISACGFHTAALSENGQVFTFGEGKFGRLGHNSERNQPVAKC 236

Query: 369 LSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLR 428
           + +L      QV      T  + ++G V+ +G    G LG  D+   ++++  R+ +SL 
Sbjct: 237 IDALIGKRIKQVACGGFHTAAVTESGHVFTWGGGEHGQLGHGDK--VNQIIPTRV-ESLI 293

Query: 429 AHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 476
             ++ Q++ G  HTV +TD+G +F +G+ +  +LGH+      EP  I
Sbjct: 294 DKNIIQLTCGWSHTVALTDKGEVFTWGNGDHGKLGHNDTNKVTEPKLI 341



 Score =  138 bits (347), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 102/336 (30%), Positives = 170/336 (50%), Gaps = 10/336 (2%)

Query: 114 MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +QI+ G  HT+++++   V++ G    G LGHG    + V     +      V QV+   
Sbjct: 37  VQISCGSGHTVVLTDDGKVYTWGRGDDGRLGHGDNGWKFVPRLVEDLRDKK-VRQVTCGS 95

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            H A V  SG+++T G       GH + N     P LVE++KG+  +QV  G   T  L 
Sbjct: 96  YHTAAVTVSGELYTWGGGMYGKLGHGNENGH-STPSLVESIKGLYVRQVACGSRHTVVLL 154

Query: 233 IRGHVHTCGSNTHGQLGHGDTL-DRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
               V+T G   +G  GHGDT   + +P  ++ L E+ ++ QI+A   +  A++ NG V+
Sbjct: 155 ENQDVYTWGDKENGVSGHGDTSGHQYSPYCVSELVEI-NIKQISACGFHTAALSENGQVF 213

Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 351
           +FG G    LGH  + ++   + I      G  + +V+ G  H  A+  SG+V+TWG G 
Sbjct: 214 TFGEGKFGRLGHNSERNQPVAKCIDAL--IGKRIKQVACGGFHTAAVTESGHVFTWGGGE 271

Query: 352 CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 411
            G LGHGD++++ +P  + SL     +Q+      T  L D G V+ +G    G LG  D
Sbjct: 272 HGQLGHGDKVNQIIPTRVESLIDKNIIQLTCGWSHTVALTDKGEVFTWGNGDHGKLGHND 331

Query: 412 RGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTD 447
              ++KV  P+++++  +  V  +++   HTV + +
Sbjct: 332 ---TNKVTEPKLIETFNSKRVISVASYNEHTVALVN 364


>gi|356576039|ref|XP_003556142.1| PREDICTED: uncharacterized protein LOC100811999 [Glycine max]
          Length = 1098

 Score =  139 bits (350), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 101/324 (31%), Positives = 154/324 (47%), Gaps = 21/324 (6%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V+Q++    HAA V + G++FT G+ S    GH    + + +PRLVEA+       V  G
Sbjct: 281 VLQIACGVKHAALVTRQGELFTWGEESGGRLGH-GVGKNVVQPRLVEAMASTTVDFVACG 339

Query: 225 LNFTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSYM 281
              T  +T+ G ++T G  TH  G LGHG  +    PK IA PLE +  V  +  GP + 
Sbjct: 340 EFHTCAVTMAGELYTWGDGTHNAGLLGHGTDVSHWIPKRIAGPLEGL-QVALVTCGPWHT 398

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD-- 339
             +T  G +++FG G+   LGHG++ +   PR +++    G+  + V+ G  H  A+   
Sbjct: 399 ALITSTGQLFTFGDGTFGVLGHGDRENVSYPREVESL--SGLRTIAVACGVWHTAAIIEV 456

Query: 340 ---------SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVL 390
                    SSG ++TWG G    LGHGD+  +  P  + SL      ++      T  L
Sbjct: 457 IVTQSSASVSSGKLFTWGDGDKNRLGHGDKDARLEPTCVPSLIEDNFHRIACGHSLTVGL 516

Query: 391 VDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGR 450
             +G V+  G   +G LG P    SD  L   + D      V +I+ G YH  V+T +  
Sbjct: 517 TTSGRVFTMGSTVYGQLGNPQ---SDGKLPCLVEDKFAGESVEEIACGAYHVAVLTSKNE 573

Query: 451 LFGFGDNERAQLGHDTLRGCLEPT 474
           +F +G     +LGH  +     PT
Sbjct: 574 VFTWGKGANGRLGHGDVEDRKSPT 597



 Score = 95.9 bits (237), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 84/282 (29%), Positives = 125/282 (44%), Gaps = 21/282 (7%)

Query: 116 ITTGRYHTLLISNSS---VFSCGSSLCGVLGHGPETTQCVSFTRINFP-SAAHVVQVSAS 171
           +  G +HT  ++ +     +  G+   G+LGHG + +  +   RI  P     V  V+  
Sbjct: 336 VACGEFHTCAVTMAGELYTWGDGTHNAGLLGHGTDVSHWIP-KRIAGPLEGLQVALVTCG 394

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
             H A +  +GQ+FT GD +    GH D    +  PR VE+L G+    V  G+  T  +
Sbjct: 395 PWHTALITSTGQLFTFGDGTFGVLGHGDREN-VSYPREVESLSGLRTIAVACGVWHTAAI 453

Query: 232 -----------TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 280
                         G + T G     +LGHGD   R  P  +  L E  +  +IA G S 
Sbjct: 454 IEVIVTQSSASVSSGKLFTWGDGDKNRLGHGDKDARLEPTCVPSLIE-DNFHRIACGHSL 512

Query: 281 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 340
            + +T +G V++ GS     LG+ +   +L       F   G  V  ++ G  HV  L S
Sbjct: 513 TVGLTTSGRVFTMGSTVYGQLGNPQSDGKLPCLVEDKF--AGESVEEIACGAYHVAVLTS 570

Query: 341 SGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKS-HLAVQVC 381
              V+TWGKG  G LGHGD  D+  P  + +LK  H+    C
Sbjct: 571 KNEVFTWGKGANGRLGHGDVEDRKSPTLVEALKDRHVKYIAC 612



 Score = 89.0 bits (219), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 83/296 (28%), Positives = 136/296 (45%), Gaps = 21/296 (7%)

Query: 204 IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 263
           I  PR +E+   +   Q+  G+     +T +G + T G  + G+LGHG   +   P+ + 
Sbjct: 267 ILLPRPLESNVVLDVLQIACGVKHAALVTRQGELFTWGEESGGRLGHGVGKNVVQPRLVE 326

Query: 264 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC--LGHGEQHDELQPRAIQTFRRK 321
            +    +V  +A G  +  AVT  G +Y++G G++    LGHG       P+ I     +
Sbjct: 327 AMAST-TVDFVACGEFHTCAVTMAGELYTWGDGTHNAGLLGHGTDVSHWIPKRI-AGPLE 384

Query: 322 GIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP---EPLSSLKS---- 374
           G+ V  V+ G  H   + S+G ++T+G G  G LGHGD  + + P   E LS L++    
Sbjct: 385 GLQVALVTCGPWHTALITSTGQLFTFGDGTFGVLGHGDRENVSYPREVESLSGLRTIAVA 444

Query: 375 ----HLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAH 430
               H A  +     ++   V +G ++ +G      LG  D+   D  L P  + SL   
Sbjct: 445 CGVWHTAAIIEVIVTQSSASVSSGKLFTWGDGDKNRLGHGDK---DARLEPTCVPSLIED 501

Query: 431 HVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG---CLEPTEIFIQEMEE 483
           +  +I+ G   TV +T  GR+F  G     QLG+    G   CL   +   + +EE
Sbjct: 502 NFHRIACGHSLTVGLTTSGRVFTMGSTVYGQLGNPQSDGKLPCLVEDKFAGESVEE 557



 Score = 80.1 bits (196), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 71/252 (28%), Positives = 117/252 (46%), Gaps = 19/252 (7%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSASEN 173
           +T G +HT LI+++  +F+ G    GVLGHG    + VS+ R +   S    + V+    
Sbjct: 391 VTCGPWHTALITSTGQLFTFGDGTFGVLGHGDR--ENVSYPREVESLSGLRTIAVACGVW 448

Query: 174 HAAFVLQ-----------SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 222
           H A +++           SG++FT GD      GH D +  +  P  V +L      ++ 
Sbjct: 449 HTAAIIEVIVTQSSASVSSGKLFTWGDGDKNRLGHGDKDARL-EPTCVPSLIEDNFHRIA 507

Query: 223 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 282
            G + T  LT  G V T GS  +GQLG+  + D   P  +       SV +IA G  ++ 
Sbjct: 508 CGHSLTVGLTTSGRVFTMGSTVYGQLGNPQS-DGKLPCLVEDKFAGESVEEIACGAYHVA 566

Query: 283 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
            +T    V+++G G+N  LGHG+  D   P  ++  + +  HV  ++ G  +  A+    
Sbjct: 567 VLTSKNEVFTWGKGANGRLGHGDVEDRKSPTLVEALKDR--HVKYIACGSNYSSAICLHK 624

Query: 343 YVYTWGKGYCGA 354
           +V    +  C A
Sbjct: 625 WVSGAEQSQCSA 636



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 46/170 (27%), Positives = 76/170 (44%), Gaps = 4/170 (2%)

Query: 308 DELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPE 367
           D L PR +++     + V++++ G +H   +   G ++TWG+   G LGHG   +   P 
Sbjct: 266 DILLPRPLES--NVVLDVLQIACGVKHAALVTRQGELFTWGEESGGRLGHGVGKNVVQPR 323

Query: 368 PLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRP-RILDS 426
            + ++ S     V   +  T  +   G +Y +G  G  + G    G       P RI   
Sbjct: 324 LVEAMASTTVDFVACGEFHTCAVTMAGELYTWG-DGTHNAGLLGHGTDVSHWIPKRIAGP 382

Query: 427 LRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 476
           L    V+ ++ G +HT ++T  G+LF FGD     LGH        P E+
Sbjct: 383 LEGLQVALVTCGPWHTALITSTGQLFTFGDGTFGVLGHGDRENVSYPREV 432


>gi|218196711|gb|EEC79138.1| hypothetical protein OsI_19792 [Oryza sativa Indica Group]
          Length = 1385

 Score =  139 bits (350), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 103/330 (31%), Positives = 162/330 (49%), Gaps = 24/330 (7%)

Query: 151 CVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRL 209
           C+    + F     V  +S    HA  V + G++++ G+ S    GH  D + P  +P+L
Sbjct: 343 CLIPKPLEFAVKLDVQNISCGGRHATLVTKQGEIYSWGEESGGRLGHGVDCDVP--QPKL 400

Query: 210 VEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSI-APLE 266
           ++AL  +  + V  G   T  +T+ G ++T G+ T   G LGHG+ +    PK +  PLE
Sbjct: 401 IDALANMNIELVACGEYHTCAVTLSGDLYTWGNGTSNSGLLGHGNEVSHWVPKRVNGPLE 460

Query: 267 EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVV 326
            +  V  I+ GP +   VT  G +++FG GS   LGHG++     PR +++   KG+  V
Sbjct: 461 GI-HVSAISCGPWHTAIVTSAGQLFTFGDGSFGVLGHGDRQSLSVPREVESL--KGLRTV 517

Query: 327 RVSAGDEHVVAL------------DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKS 374
           R + G  H  A+             SSG ++TWG G  G LGHGD+  + +P  +++L  
Sbjct: 518 RAACGVWHTAAVVEVMVGNSSSSNCSSGKIFTWGDGDKGRLGHGDKDTRLVPTCVAALVE 577

Query: 375 HLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQ 434
               Q+      T  L  +G VY  G   +G LG P    +D +L  R+   L  + V +
Sbjct: 578 PNFCQIACGHCMTVALTTSGHVYTMGSPVYGQLGNPQ---ADGMLPVRVEGKLHKNFVEE 634

Query: 435 ISTGLYHTVVVTDRGRLFGFGDNERAQLGH 464
           IS G YH  V+T R  ++ +G     +LGH
Sbjct: 635 ISCGAYHVAVLTSRTEVYTWGKGANGRLGH 664



 Score =  120 bits (301), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 101/281 (35%), Positives = 134/281 (47%), Gaps = 24/281 (8%)

Query: 112 GNMQI---TTGRYHTLLISNSS---VFSCGSSLCGVLGHGPETTQCVSFTRINFP-SAAH 164
            NM I     G YHT  ++ S     +  G+S  G+LGHG E +  V   R+N P    H
Sbjct: 405 ANMNIELVACGEYHTCAVTLSGDLYTWGNGTSNSGLLGHGNEVSHWVP-KRVNGPLEGIH 463

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V  +S    H A V  +GQ+FT GD S    GH D  + +  PR VE+LKG+   +   G
Sbjct: 464 VSAISCGPWHTAIVTSAGQLFTFGDGSFGVLGHGD-RQSLSVPREVESLKGLRTVRAACG 522

Query: 225 LNFTGFLT------------IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV 272
           +  T  +               G + T G    G+LGHGD   R  P  +A L E  +  
Sbjct: 523 VWHTAAVVEVMVGNSSSSNCSSGKIFTWGDGDKGRLGHGDKDTRLVPTCVAALVEP-NFC 581

Query: 273 QIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGD 332
           QIA G    +A+T +G VY+ GS     LG+  Q D + P  ++    K   V  +S G 
Sbjct: 582 QIACGHCMTVALTTSGHVYTMGSPVYGQLGN-PQADGMLPVRVEGKLHKNF-VEEISCGA 639

Query: 333 EHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
            HV  L S   VYTWGKG  G LGHGD  D++ P  + SLK
Sbjct: 640 YHVAVLTSRTEVYTWGKGANGRLGHGDTDDRSSPTLVESLK 680



 Score = 92.0 bits (227), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 69/222 (31%), Positives = 105/222 (47%), Gaps = 26/222 (11%)

Query: 271 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 330
           V  I+ G  +   VT  G +YS+G  S   LGHG   D  QP+ I       I +V  + 
Sbjct: 357 VQNISCGGRHATLVTKQGEIYSWGEESGGRLGHGVDCDVPQPKLIDALANMNIELV--AC 414

Query: 331 GDEHVVALDSSGYVYTWGKGYC--GALGHGDEIDKTLPE----PLSSLKSHLAVQVCARK 384
           G+ H  A+  SG +YTWG G    G LGHG+E+   +P+    PL  +  H++   C   
Sbjct: 415 GEYHTCAVTLSGDLYTWGNGTSNSGLLGHGNEVSHWVPKRVNGPLEGI--HVSAISCG-P 471

Query: 385 RKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV 444
             T ++   G ++ FG   FG LG  DR     +  PR ++SL+     + + G++HT  
Sbjct: 472 WHTAIVTSAGQLFTFGDGSFGVLGHGDR---QSLSVPREVESLKGLRTVRAACGVWHTAA 528

Query: 445 VTD------------RGRLFGFGDNERAQLGHDTLRGCLEPT 474
           V +             G++F +GD ++ +LGH      L PT
Sbjct: 529 VVEVMVGNSSSSNCSSGKIFTWGDGDKGRLGHGDKDTRLVPT 570



 Score = 85.9 bits (211), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 86/347 (24%), Positives = 145/347 (41%), Gaps = 33/347 (9%)

Query: 119 GRYHTLLISNSSVFSCGSSLCGVLGHG-----PETTQCVSFTRINFPSAAHVVQVSASEN 173
           GR+ TL+     ++S G    G LGHG     P+     +   +N      +  V+  E 
Sbjct: 364 GRHATLVTKQGEIYSWGEESGGRLGHGVDCDVPQPKLIDALANMN------IELVACGEY 417

Query: 174 HAAFVLQSGQVFTCGDNSSFC--CGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
           H   V  SG ++T G+ +S     GH +        R+   L+G+    ++ G   T  +
Sbjct: 418 HTCAVTLSGDLYTWGNGTSNSGLLGHGNEVSHWVPKRVNGPLEGIHVSAISCGPWHTAIV 477

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE------------EVGSVVQIAAGPS 279
           T  G + T G  + G LGHGD      P+ +  L+               +VV++  G +
Sbjct: 478 TSAGQLFTFGDGSFGVLGHGDRQSLSVPREVESLKGLRTVRAACGVWHTAAVVEVMVG-N 536

Query: 280 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 339
              +   +G ++++G G    LGHG++   L P  +        +  +++ G    VAL 
Sbjct: 537 SSSSNCSSGKIFTWGDGDKGRLGHGDKDTRLVPTCVAALVEP--NFCQIACGHCMTVALT 594

Query: 340 SSGYVYTWGKGYCGALGHGDEIDKTLPEPLS-SLKSHLAVQVCARKRKTFVLVDTGSVYG 398
           +SG+VYT G    G LG+  + D  LP  +   L  +   ++        VL     VY 
Sbjct: 595 TSGHVYTMGSPVYGQLGN-PQADGMLPVRVEGKLHKNFVEEISCGAYHVAVLTSRTEVYT 653

Query: 399 FGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVV 445
           +G    G LG    G +D    P +++SL+   V  +  G+  T  +
Sbjct: 654 WGKGANGRLGH---GDTDDRSSPTLVESLKDKQVRTVVCGINFTAAI 697



 Score = 76.3 bits (186), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 67/230 (29%), Positives = 106/230 (46%), Gaps = 28/230 (12%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSASEN 173
           I+ G +HT +++++  +F+ G    GVLGHG    Q +S  R +        V+ +    
Sbjct: 467 ISCGPWHTAIVTSAGQLFTFGDGSFGVLGHG--DRQSLSVPREVESLKGLRTVRAACGVW 524

Query: 174 HAAFVLQ------------SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQV 221
           H A V++            SG++FT GD      GH D +  +  P  V AL      Q+
Sbjct: 525 HTAAVVEVMVGNSSSSNCSSGKIFTWGDGDKGRLGHGDKDTRLV-PTCVAALVEPNFCQI 583

Query: 222 TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS-----VVQIAA 276
             G   T  LT  GHV+T GS  +GQLG+      P    + P+   G      V +I+ 
Sbjct: 584 ACGHCMTVALTTSGHVYTMGSPVYGQLGN------PQADGMLPVRVEGKLHKNFVEEISC 637

Query: 277 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVV 326
           G  ++  +T    VY++G G+N  LGHG+  D   P  +++ + K +  V
Sbjct: 638 GAYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRSSPTLVESLKDKQVRTV 687



 Score = 69.7 bits (169), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 57/175 (32%), Positives = 84/175 (48%), Gaps = 6/175 (3%)

Query: 304 GEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK 363
           G + D L P+ ++ F  K + V  +S G  H   +   G +Y+WG+   G LGHG + D 
Sbjct: 338 GVKMDCLIPKPLE-FAVK-LDVQNISCGGRHATLVTKQGEIYSWGEESGGRLGHGVDCDV 395

Query: 364 TLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVY--GFGWMGFGSLGFPDRGVSDKVLRP 421
             P+ + +L +     V   +  T  +  +G +Y  G G    G LG  +  VS  V + 
Sbjct: 396 PQPKLIDALANMNIELVACGEYHTCAVTLSGDLYTWGNGTSNSGLLGHGNE-VSHWVPK- 453

Query: 422 RILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 476
           R+   L   HVS IS G +HT +VT  G+LF FGD     LGH   +    P E+
Sbjct: 454 RVNGPLEGIHVSAISCGPWHTAIVTSAGQLFTFGDGSFGVLGHGDRQSLSVPREV 508



 Score = 46.2 bits (108), Expect = 0.036,   Method: Compositional matrix adjust.
 Identities = 48/193 (24%), Positives = 84/193 (43%), Gaps = 10/193 (5%)

Query: 92  RVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQC 151
           R +R    V H++ +VE       +  G   +   S+  +F+ G    G LGHG + T+ 
Sbjct: 515 RTVRAACGVWHTAAVVE-------VMVGNSSSSNCSSGKIFTWGDGDKGRLGHGDKDTRL 567

Query: 152 VSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVE 211
           V  T +      +  Q++        +  SG V+T G       G+   +  +   R+  
Sbjct: 568 VP-TCVAALVEPNFCQIACGHCMTVALTTSGHVYTMGSPVYGQLGNPQADG-MLPVRVEG 625

Query: 212 ALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSV 271
            L     ++++ G      LT R  V+T G   +G+LGHGDT DR +P  +  L++   V
Sbjct: 626 KLHKNFVEEISCGAYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRSSPTLVESLKD-KQV 684

Query: 272 VQIAAGPSYMLAV 284
             +  G ++  A+
Sbjct: 685 RTVVCGINFTAAI 697



 Score = 41.2 bits (95), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 37/127 (29%), Positives = 57/127 (44%), Gaps = 9/127 (7%)

Query: 115 QITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAH---VVQVSA 170
           QI  G   T+ ++ S  V++ GS + G LG+     Q      +      H   V ++S 
Sbjct: 582 QIACGHCMTVALTTSGHVYTMGSPVYGQLGN----PQADGMLPVRVEGKLHKNFVEEISC 637

Query: 171 SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
              H A +    +V+T G  ++   GH DT+     P LVE+LK    + V  G+NFT  
Sbjct: 638 GAYHVAVLTSRTEVYTWGKGANGRLGHGDTDD-RSSPTLVESLKDKQVRTVVCGINFTAA 696

Query: 231 LTIRGHV 237
           + I   V
Sbjct: 697 ICIHKWV 703


>gi|297791865|ref|XP_002863817.1| hypothetical protein ARALYDRAFT_917597 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297309652|gb|EFH40076.1| hypothetical protein ARALYDRAFT_917597 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 1083

 Score =  139 bits (350), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 99/315 (31%), Positives = 152/315 (48%), Gaps = 21/315 (6%)

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
           HAA V + G+VFT G+ S    GH    + +  P+L+E+L       V  G   T  +T+
Sbjct: 288 HAALVSRQGEVFTWGEASGGRLGH-GMGKDVTGPQLIESLAATSVDFVACGEFHTCAVTM 346

Query: 234 RGHVHTCGSNTH--GQLGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSYMLAVTGNGVV 290
            G ++T G  TH  G LGHG  +    PK I+ PLE +  +  ++ GP +   +T  G +
Sbjct: 347 TGEIYTWGDGTHNAGLLGHGTDVSHWIPKRISGPLEGL-QIASVSCGPWHTALITSTGQL 405

Query: 291 YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL-----------D 339
           ++FG G+   LGHG++     PR +++    G+  + V+ G  H  A+            
Sbjct: 406 FTFGDGTFGVLGHGDKETVFYPREVESL--SGLRTIAVACGVWHAAAIVEVIVTQSTSSI 463

Query: 340 SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGF 399
           SSG ++TWG G    LGHGD+  +  P  +S+L  H   +V      T  L  +G VY  
Sbjct: 464 SSGKLFTWGDGDKSRLGHGDKESRLKPTCVSALIDHTFHRVACGHSLTVGLTTSGKVYTM 523

Query: 400 GWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNER 459
           G   +G LG P+   +D  L   + D L    V +I+ G YH  V+T R  +F +G    
Sbjct: 524 GSTVYGQLGNPN---ADGKLPCLVEDKLIKDCVEEIACGAYHVAVLTSRNEVFTWGKGAN 580

Query: 460 AQLGHDTLRGCLEPT 474
            +LGH  +     P+
Sbjct: 581 GRLGHGDIEDRKAPS 595



 Score = 96.3 bits (238), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 81/273 (29%), Positives = 125/273 (45%), Gaps = 20/273 (7%)

Query: 116 ITTGRYHTLLISNSS---VFSCGSSLCGVLGHGPETTQCVSFTRINFP-SAAHVVQVSAS 171
           +  G +HT  ++ +     +  G+   G+LGHG + +  +   RI+ P     +  VS  
Sbjct: 334 VACGEFHTCAVTMTGEIYTWGDGTHNAGLLGHGTDVSHWIP-KRISGPLEGLQIASVSCG 392

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
             H A +  +GQ+FT GD +    GH D    +F PR VE+L G+    V  G+     +
Sbjct: 393 PWHTALITSTGQLFTFGDGTFGVLGHGD-KETVFYPREVESLSGLRTIAVACGVWHAAAI 451

Query: 232 T-----------IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 280
                         G + T G     +LGHGD   R  P  ++ L +  +  ++A G S 
Sbjct: 452 VEVIVTQSTSSISSGKLFTWGDGDKSRLGHGDKESRLKPTCVSALID-HTFHRVACGHSL 510

Query: 281 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 340
            + +T +G VY+ GS     LG+     +L P  ++    K   V  ++ G  HV  L S
Sbjct: 511 TVGLTTSGKVYTMGSTVYGQLGNPNADGKL-PCLVEDKLIKDC-VEEIACGAYHVAVLTS 568

Query: 341 SGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
              V+TWGKG  G LGHGD  D+  P  + +LK
Sbjct: 569 RNEVFTWGKGANGRLGHGDIEDRKAPSLVDTLK 601



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 93/352 (26%), Positives = 150/352 (42%), Gaps = 37/352 (10%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHVVQ 167
           I  G  H  L+S    VF+ G +  G LGHG       P+  + ++ T ++F        
Sbjct: 282 IACGVRHAALVSRQGEVFTWGEASGGRLGHGMGKDVTGPQLIESLAATSVDF-------- 333

Query: 168 VSASENHAAFVLQSGQVFTCGD--NSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 225
           V+  E H   V  +G+++T GD  +++   GH          R+   L+G+    V+ G 
Sbjct: 334 VACGEFHTCAVTMTGEIYTWGDGTHNAGLLGHGTDVSHWIPKRISGPLEGLQIASVSCGP 393

Query: 226 NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 285
             T  +T  G + T G  T G LGHGD      P+ +  L  + ++  +A G  +  A+ 
Sbjct: 394 WHTALITSTGQLFTFGDGTFGVLGHGDKETVFYPREVESLSGLRTIA-VACGVWHAAAIV 452

Query: 286 -----------GNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEH 334
                       +G ++++G G    LGHG++   L+P  +        H  RV+ G   
Sbjct: 453 EVIVTQSTSSISSGKLFTWGDGDKSRLGHGDKESRLKPTCVSALIDHTFH--RVACGHSL 510

Query: 335 VVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPL-SSLKSHLAVQVCARKRKTFVLVDT 393
            V L +SG VYT G    G LG+ +  D  LP  +   L      ++        VL   
Sbjct: 511 TVGLTTSGKVYTMGSTVYGQLGNPN-ADGKLPCLVEDKLIKDCVEEIACGAYHVAVLTSR 569

Query: 394 GSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVV 445
             V+ +G    G LG  D  + D+   P ++D+L+  HV  I+ G   T  +
Sbjct: 570 NEVFTWGKGANGRLGHGD--IEDRKA-PSLVDTLKERHVKNIACGSNFTAAI 618



 Score = 88.2 bits (217), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 83/312 (26%), Positives = 142/312 (45%), Gaps = 24/312 (7%)

Query: 188 GDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQ 247
            + ++ C G R     +  P+ +E+   +    +  G+     ++ +G V T G  + G+
Sbjct: 252 AEKNATCVGSRSD---VLIPKPLESNVVLDVHHIACGVRHAALVSRQGEVFTWGEASGGR 308

Query: 248 LGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC--LGHGE 305
           LGHG   D   P+ I  L    SV  +A G  +  AVT  G +Y++G G++    LGHG 
Sbjct: 309 LGHGMGKDVTGPQLIESLAAT-SVDFVACGEFHTCAVTMTGEIYTWGDGTHNAGLLGHGT 367

Query: 306 QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTL 365
                 P+ I +   +G+ +  VS G  H   + S+G ++T+G G  G LGHGD+     
Sbjct: 368 DVSHWIPKRI-SGPLEGLQIASVSCGPWHTALITSTGQLFTFGDGTFGVLGHGDKETVFY 426

Query: 366 P---EPLSSLKS--------HLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGV 414
           P   E LS L++        H A  V     ++   + +G ++ +G      LG  D+  
Sbjct: 427 PREVESLSGLRTIAVACGVWHAAAIVEVIVTQSTSSISSGKLFTWGDGDKSRLGHGDK-- 484

Query: 415 SDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG---CL 471
            +  L+P  + +L  H   +++ G   TV +T  G+++  G     QLG+    G   CL
Sbjct: 485 -ESRLKPTCVSALIDHTFHRVACGHSLTVGLTTSGKVYTMGSTVYGQLGNPNADGKLPCL 543

Query: 472 EPTEIFIQEMEE 483
              ++    +EE
Sbjct: 544 VEDKLIKDCVEE 555



 Score = 83.2 bits (204), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 73/252 (28%), Positives = 117/252 (46%), Gaps = 19/252 (7%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSASEN 173
           ++ G +HT LI+++  +F+ G    GVLGHG + T  V + R +   S    + V+    
Sbjct: 389 VSCGPWHTALITSTGQLFTFGDGTFGVLGHGDKET--VFYPREVESLSGLRTIAVACGVW 446

Query: 174 HAAFVLQ-----------SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 222
           HAA +++           SG++FT GD      GH D    + +P  V AL      +V 
Sbjct: 447 HAAAIVEVIVTQSTSSISSGKLFTWGDGDKSRLGHGDKESRL-KPTCVSALIDHTFHRVA 505

Query: 223 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 282
            G + T  LT  G V+T GS  +GQLG+ +  D   P  +        V +IA G  ++ 
Sbjct: 506 CGHSLTVGLTTSGKVYTMGSTVYGQLGNPNA-DGKLPCLVEDKLIKDCVEEIACGAYHVA 564

Query: 283 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
            +T    V+++G G+N  LGHG+  D   P  + T + +  HV  ++ G     A+    
Sbjct: 565 VLTSRNEVFTWGKGANGRLGHGDIEDRKAPSLVDTLKER--HVKNIACGSNFTAAICLHK 622

Query: 343 YVYTWGKGYCGA 354
           +V    +  C A
Sbjct: 623 WVSGTEQSQCSA 634



 Score = 68.2 bits (165), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 56/189 (29%), Positives = 85/189 (44%), Gaps = 7/189 (3%)

Query: 290 VYSFGSGSNF-CLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 348
           V  FG+  N  C+G   + D L P+ +++     +H   ++ G  H   +   G V+TWG
Sbjct: 247 VAKFGAEKNATCVG--SRSDVLIPKPLESNVVLDVH--HIACGVRHAALVSRQGEVFTWG 302

Query: 349 KGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLG 408
           +   G LGHG   D T P+ + SL +     V   +  T  +  TG +Y +G  G  + G
Sbjct: 303 EASGGRLGHGMGKDVTGPQLIESLAATSVDFVACGEFHTCAVTMTGEIYTWG-DGTHNAG 361

Query: 409 FPDRGVSDKVLRP-RILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTL 467
               G       P RI   L    ++ +S G +HT ++T  G+LF FGD     LGH   
Sbjct: 362 LLGHGTDVSHWIPKRISGPLEGLQIASVSCGPWHTALITSTGQLFTFGDGTFGVLGHGDK 421

Query: 468 RGCLEPTEI 476
                P E+
Sbjct: 422 ETVFYPREV 430


>gi|255572207|ref|XP_002527043.1| Ran GTPase binding protein, putative [Ricinus communis]
 gi|223533605|gb|EEF35343.1| Ran GTPase binding protein, putative [Ricinus communis]
          Length = 1100

 Score =  139 bits (350), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 99/315 (31%), Positives = 156/315 (49%), Gaps = 22/315 (6%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V  ++    HAA V + G+VF+ G+ S    GH   +  +  P+L+++L  +  + V  G
Sbjct: 306 VQNIACGGRHAALVTKQGEVFSWGEESGGRLGH-GVDSDVLHPKLIDSLSNINIELVACG 364

Query: 225 LNFTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSI-APLEEVGSVVQIAAGPSYM 281
              T  +T+ G ++T G  T+  G LGHG+ +    PK +  PLE +  V  I+ GP + 
Sbjct: 365 EYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGI-HVSSISCGPWHT 423

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL--- 338
             VT +G +++FG G+   LGHG++     PR +++   KG+  VR + G  H  A+   
Sbjct: 424 AVVTSSGQLFTFGDGTFGVLGHGDRKSVSIPREVESL--KGLRTVRAACGVWHTAAVVEV 481

Query: 339 ---------DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFV 389
                     SSG ++TWG G  G LGHGD+  K +P  +++L      QV      T  
Sbjct: 482 MVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCQVACGHSLTVA 541

Query: 390 LVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRG 449
           L  +G VY  G   +G LG P    +D  L  R+   L    V +I+ G YH  V+T + 
Sbjct: 542 LTTSGHVYTMGSPVYGQLGNPQ---ADGKLPNRVEGRLSKSFVEEIACGAYHVAVLTSKT 598

Query: 450 RLFGFGDNERAQLGH 464
            ++ +G     +LGH
Sbjct: 599 EVYTWGKGANGRLGH 613



 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 94/274 (34%), Positives = 130/274 (47%), Gaps = 21/274 (7%)

Query: 116 ITTGRYHTLLISNSS---VFSCGSSLCGVLGHGPETTQCVSFTRINFP-SAAHVVQVSAS 171
           +  G YHT  ++ S     +  G+   G+LGHG E +  V   R+N P    HV  +S  
Sbjct: 361 VACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVP-KRVNGPLEGIHVSSISCG 419

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
             H A V  SGQ+FT GD +    GH D  + +  PR VE+LKG+   +   G+  T  +
Sbjct: 420 PWHTAVVTSSGQLFTFGDGTFGVLGHGD-RKSVSIPREVESLKGLRTVRAACGVWHTAAV 478

Query: 232 T------------IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPS 279
                          G + T G    G+LGHGD   +  P  +A L E  +  Q+A G S
Sbjct: 479 VEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEP-NFCQVACGHS 537

Query: 280 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 339
             +A+T +G VY+ GS     LG+  Q D   P  ++    K   V  ++ G  HV  L 
Sbjct: 538 LTVALTTSGHVYTMGSPVYGQLGN-PQADGKLPNRVEGRLSKSF-VEEIACGAYHVAVLT 595

Query: 340 SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
           S   VYTWGKG  G LGHGD  D+  P  + +LK
Sbjct: 596 SKTEVYTWGKGANGRLGHGDTDDRNFPSLVEALK 629



 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 80/244 (32%), Positives = 117/244 (47%), Gaps = 27/244 (11%)

Query: 249 GHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHD 308
           G G  LD   PK++     V  V  IA G  +   VT  G V+S+G  S   LGHG   D
Sbjct: 285 GFGVKLDSLLPKALESTV-VLDVQNIACGGRHAALVTKQGEVFSWGEESGGRLGHGVDSD 343

Query: 309 ELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC--GALGHGDEIDKTLP 366
            L P+ I +     I++  V+ G+ H  A+  SG +YTWG G    G LGHG+E+   +P
Sbjct: 344 VLHPKLIDSL--SNINIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVP 401

Query: 367 E----PLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPR 422
           +    PL  +  H++   C     T V+  +G ++ FG   FG LG  DR     V  PR
Sbjct: 402 KRVNGPLEGI--HVSSISCG-PWHTAVVTSSGQLFTFGDGTFGVLGHGDR---KSVSIPR 455

Query: 423 ILDSLRAHHVSQISTGLYHTVVVTD------------RGRLFGFGDNERAQLGHDTLRGC 470
            ++SL+     + + G++HT  V +             G+LF +GD ++ +LGH      
Sbjct: 456 EVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAK 515

Query: 471 LEPT 474
           L PT
Sbjct: 516 LVPT 519



 Score = 95.1 bits (235), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 80/279 (28%), Positives = 130/279 (46%), Gaps = 19/279 (6%)

Query: 207 PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 266
           P+ +E+   +  + +  G      +T +G V + G  + G+LGHG   D   PK I  L 
Sbjct: 295 PKALESTVVLDVQNIACGGRHAALVTKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDSLS 354

Query: 267 EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS-NF-CLGHGEQHDELQPRAIQTFRRKGIH 324
            + ++  +A G  +  AVT +G +Y++G G+ NF  LGHG +     P+ +     +GIH
Sbjct: 355 NI-NIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNG-PLEGIH 412

Query: 325 VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARK 384
           V  +S G  H   + SSG ++T+G G  G LGHGD    ++P  + SLK    V+     
Sbjct: 413 VSSISCGPWHTAVVTSSGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGV 472

Query: 385 RKTFVLVDT------------GSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHV 432
             T  +V+             G ++ +G    G LG  D+   +  L P  + +L   + 
Sbjct: 473 WHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDK---EAKLVPTCVAALVEPNF 529

Query: 433 SQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCL 471
            Q++ G   TV +T  G ++  G     QLG+    G L
Sbjct: 530 CQVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKL 568



 Score = 79.0 bits (193), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 68/225 (30%), Positives = 103/225 (45%), Gaps = 18/225 (8%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSASEN 173
           I+ G +HT ++++S  +F+ G    GVLGHG    + VS  R +        V+ +    
Sbjct: 416 ISCGPWHTAVVTSSGQLFTFGDGTFGVLGHGDR--KSVSIPREVESLKGLRTVRAACGVW 473

Query: 174 HAAFVLQ------------SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQV 221
           H A V++            SG++FT GD      GH D    +  P  V AL      QV
Sbjct: 474 HTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLV-PTCVAALVEPNFCQV 532

Query: 222 TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 281
             G + T  LT  GHV+T GS  +GQLG+    D   P  +        V +IA G  ++
Sbjct: 533 ACGHSLTVALTTSGHVYTMGSPVYGQLGNPQA-DGKLPNRVEGRLSKSFVEEIACGAYHV 591

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVV 326
             +T    VY++G G+N  LGHG+  D   P  ++  + K +  +
Sbjct: 592 AVLTSKTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSI 636



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 60/178 (33%), Positives = 91/178 (51%), Gaps = 8/178 (4%)

Query: 302 GHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEI 361
           G G + D L P+A+++     + V  ++ G  H   +   G V++WG+   G LGHG + 
Sbjct: 285 GFGVKLDSLLPKALESTVV--LDVQNIACGGRHAALVTKQGEVFSWGEESGGRLGHGVDS 342

Query: 362 DKTLPEPLSSLKSHLAVQVCA-RKRKTFVLVDTGSVY--GFGWMGFGSLGFPDRGVSDKV 418
           D   P+ + SL S++ +++ A  +  T  +  +G +Y  G G   FG LG  +  VS  V
Sbjct: 343 DVLHPKLIDSL-SNINIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNE-VSHWV 400

Query: 419 LRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 476
            + R+   L   HVS IS G +HT VVT  G+LF FGD     LGH   +    P E+
Sbjct: 401 PK-RVNGPLEGIHVSSISCGPWHTAVVTSSGQLFTFGDGTFGVLGHGDRKSVSIPREV 457



 Score = 49.3 bits (116), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 51/194 (26%), Positives = 84/194 (43%), Gaps = 12/194 (6%)

Query: 92  RVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQC 151
           R +R    V H++ +VE       +  G   +   S+  +F+ G    G LGHG +  + 
Sbjct: 464 RTVRAACGVWHTAAVVE-------VMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKL 516

Query: 152 VSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVE 211
           V  T +      +  QV+   +    +  SG V+T G       G+   +  +  P  VE
Sbjct: 517 VP-TCVAALVEPNFCQVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKL--PNRVE 573

Query: 212 A-LKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS 270
             L     +++  G      LT +  V+T G   +G+LGHGDT DR  P  +  L++   
Sbjct: 574 GRLSKSFVEEIACGAYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKD-KQ 632

Query: 271 VVQIAAGPSYMLAV 284
           V  IA G ++  A+
Sbjct: 633 VKSIACGTNFTAAI 646



 Score = 44.7 bits (104), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 36/124 (29%), Positives = 59/124 (47%), Gaps = 3/124 (2%)

Query: 115 QITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
           Q+  G   T+ ++ S  V++ GS + G LG+ P+    +        S + V +++    
Sbjct: 531 QVACGHSLTVALTTSGHVYTMGSPVYGQLGN-PQADGKLPNRVEGRLSKSFVEEIACGAY 589

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
           H A +    +V+T G  ++   GH DT+   F P LVEALK    K +  G NFT  + +
Sbjct: 590 HVAVLTSKTEVYTWGKGANGRLGHGDTDDRNF-PSLVEALKDKQVKSIACGTNFTAAICL 648

Query: 234 RGHV 237
              V
Sbjct: 649 HKWV 652


>gi|302817810|ref|XP_002990580.1| hypothetical protein SELMODRAFT_185380 [Selaginella moellendorffii]
 gi|300141748|gb|EFJ08457.1| hypothetical protein SELMODRAFT_185380 [Selaginella moellendorffii]
          Length = 863

 Score =  139 bits (349), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 101/316 (31%), Positives = 154/316 (48%), Gaps = 26/316 (8%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V Q++    HAA V + G+VF+ G+ S    GH   +  +  P+L+++L     + V  G
Sbjct: 125 VQQIACGVRHAALVTRQGEVFSWGEESGGRLGH-GVDADVAHPQLIDSLASSTVQYVACG 183

Query: 225 LNFTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSI-APLEEVGSVVQIAAGPSYM 281
              +  +T  G ++T G  TH  G LGHG+ +   TPK +  PLE V  V  +A GP + 
Sbjct: 184 EYHSCAVTQSGDLYTWGDGTHNFGLLGHGNNISHWTPKRVGGPLEGV-RVSSVACGPWHT 242

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL--- 338
           + VT  G ++SFG G+   LGHG++     PR +++   KG+  +R + G  H  A+   
Sbjct: 243 VLVTSTGQLFSFGDGTFGVLGHGDRKSASMPREVESL--KGLKTLRAACGPWHTAAVVEV 300

Query: 339 ---------DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFV 389
                      SG ++TWG G    LGHGD+  K +P  +++L  H   QV      T  
Sbjct: 301 MSRYSNAGSSLSGKLFTWGDGDKNRLGHGDKEQKLVPTCVAALVDHNFRQVACGHSLTVA 360

Query: 390 LVDTGSVYGFGWMGFGSLGFPD-RGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDR 448
           L  TG +Y  G + +G LG P   G    VLR      L    + ++S G YH   +T +
Sbjct: 361 LTTTGHLYTMGSVSYGQLGDPQATGRLPGVLR------LGRTLIEEVSCGAYHVAALTSK 414

Query: 449 GRLFGFGDNERAQLGH 464
           G +  +G     +LGH
Sbjct: 415 GDVCTWGKGANGRLGH 430



 Score =  101 bits (251), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 88/294 (29%), Positives = 135/294 (45%), Gaps = 21/294 (7%)

Query: 205 FRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP 264
           F PR V +L  +  +Q+  G+     +T +G V + G  + G+LGHG   D   P+ I  
Sbjct: 112 FLPRAVRSLVVLDVQQIACGVRHAALVTRQGEVFSWGEESGGRLGHGVDADVAHPQLIDS 171

Query: 265 LEEVGSVVQ-IAAGPSYMLAVTGNGVVYSFGSGS-NF-CLGHGEQHDELQPRAIQTFRRK 321
           L    S VQ +A G  +  AVT +G +Y++G G+ NF  LGHG       P+ +     +
Sbjct: 172 L--ASSTVQYVACGEYHSCAVTQSGDLYTWGDGTHNFGLLGHGNNISHWTPKRVGG-PLE 228

Query: 322 GIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVC 381
           G+ V  V+ G  H V + S+G ++++G G  G LGHGD    ++P  + SLK    ++  
Sbjct: 229 GVRVSSVACGPWHTVLVTSTGQLFSFGDGTFGVLGHGDRKSASMPREVESLKGLKTLRAA 288

Query: 382 ARKRKTFVLVDTGSVYG----------FGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHH 431
                T  +V+  S Y           F W G G       G  ++ L P  + +L  H+
Sbjct: 289 CGPWHTAAVVEVMSRYSNAGSSLSGKLFTW-GDGDKNRLGHGDKEQKLVPTCVAALVDHN 347

Query: 432 VSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDT----LRGCLEPTEIFIQEM 481
             Q++ G   TV +T  G L+  G     QLG       L G L      I+E+
Sbjct: 348 FRQVACGHSLTVALTTTGHLYTMGSVSYGQLGDPQATGRLPGVLRLGRTLIEEV 401



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 89/298 (29%), Positives = 134/298 (44%), Gaps = 24/298 (8%)

Query: 100 VEHSSDIVETSAGNMQ-ITTGRYHTLLISNSS---VFSCGSSLCGVLGHGPETTQCVSFT 155
           V H   I   ++  +Q +  G YH+  ++ S     +  G+   G+LGHG   +      
Sbjct: 163 VAHPQLIDSLASSTVQYVACGEYHSCAVTQSGDLYTWGDGTHNFGLLGHGNNISHWTP-K 221

Query: 156 RINFP-SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALK 214
           R+  P     V  V+    H   V  +GQ+F+ GD +    GH D  +    PR VE+LK
Sbjct: 222 RVGGPLEGVRVSSVACGPWHTVLVTSTGQLFSFGDGTFGVLGHGD-RKSASMPREVESLK 280

Query: 215 GVPCKQVTAGLNFTGFL------------TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSI 262
           G+   +   G   T  +            ++ G + T G     +LGHGD   +  P  +
Sbjct: 281 GLKTLRAACGPWHTAAVVEVMSRYSNAGSSLSGKLFTWGDGDKNRLGHGDKEQKLVPTCV 340

Query: 263 APLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKG 322
           A L +  +  Q+A G S  +A+T  G +Y+ GS S   LG  +    L P  ++  R   
Sbjct: 341 AALVD-HNFRQVACGHSLTVALTTTGHLYTMGSVSYGQLGDPQATGRL-PGVLRLGR--- 395

Query: 323 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQV 380
             +  VS G  HV AL S G V TWGKG  G LGHGD  D+ +P  + +L+     +V
Sbjct: 396 TLIEEVSCGAYHVAALTSKGDVCTWGKGANGRLGHGDAEDRDVPSLVEALRDKQVKKV 453



 Score = 80.9 bits (198), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 72/252 (28%), Positives = 117/252 (46%), Gaps = 22/252 (8%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPS-----A 162
           +  G +HT+L++++  +FS G    GVLGHG       P   + +   +    +      
Sbjct: 235 VACGPWHTVLVTSTGQLFSFGDGTFGVLGHGDRKSASMPREVESLKGLKTLRAACGPWHT 294

Query: 163 AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 222
           A VV+V +  ++A   L SG++FT GD      GH D  + +  P  V AL     +QV 
Sbjct: 295 AAVVEVMSRYSNAGSSL-SGKLFTWGDGDKNRLGHGDKEQKLV-PTCVAALVDHNFRQVA 352

Query: 223 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV--QIAAGPSY 280
            G + T  LT  GH++T GS ++GQLG      R     +  +  +G  +  +++ G  +
Sbjct: 353 CGHSLTVALTTTGHLYTMGSVSYGQLGDPQATGR-----LPGVLRLGRTLIEEVSCGAYH 407

Query: 281 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 340
           + A+T  G V ++G G+N  LGHG+  D   P  ++  R K +  V   +     + L  
Sbjct: 408 VAALTSKGDVCTWGKGANGRLGHGDAEDRDVPSLVEALRDKQVKKVSCGSSFTSAICLHK 467

Query: 341 SGYVYTWGKGYC 352
           SG     G   C
Sbjct: 468 SGPGVGTGNSMC 479



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 52/171 (30%), Positives = 82/171 (47%), Gaps = 6/171 (3%)

Query: 308 DELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPE 367
           D   PRA+++     + V +++ G  H   +   G V++WG+   G LGHG + D   P+
Sbjct: 110 DAFLPRAVRSLVV--LDVQQIACGVRHAALVTRQGEVFSWGEESGGRLGHGVDADVAHPQ 167

Query: 368 PLSSLKSHLAVQVCARKRKTFVLVDTGSVY--GFGWMGFGSLGFPDRGVSDKVLRPRILD 425
            + SL S     V   +  +  +  +G +Y  G G   FG LG  +  +S    + R+  
Sbjct: 168 LIDSLASSTVQYVACGEYHSCAVTQSGDLYTWGDGTHNFGLLGHGN-NISHWTPK-RVGG 225

Query: 426 SLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 476
            L    VS ++ G +HTV+VT  G+LF FGD     LGH   +    P E+
Sbjct: 226 PLEGVRVSSVACGPWHTVLVTSTGQLFSFGDGTFGVLGHGDRKSASMPREV 276


>gi|158286476|ref|XP_308776.4| AGAP006994-PA [Anopheles gambiae str. PEST]
 gi|157020486|gb|EAA04764.5| AGAP006994-PA [Anopheles gambiae str. PEST]
          Length = 1055

 Score =  139 bits (349), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 104/338 (30%), Positives = 167/338 (49%), Gaps = 10/338 (2%)

Query: 130 SVFSCGSSLCGVLGHG-PETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCG 188
           +++  G++  G LG G  E  Q +   ++++  A  VV+V    +H  F+ + G+++ CG
Sbjct: 2   AIYCWGNTAHGELGLGGIEEEQVMVPRKMDWSQADEVVRVECGTSHTLFLTKEGKMYACG 61

Query: 189 DNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQL 248
           +N     GH     P  RP+ + +L+      ++ G   +  LT  G V + GSN  GQL
Sbjct: 62  NNDHGQLGHDLDTLPNKRPQRLTSLENYIITCISCGTAHSLALTNWGQVFSWGSNAVGQL 121

Query: 249 GH-GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH 307
           GH  +   +PTP+ I  +     VVQIA+G  + LA+T NG +Y++GS S   LG G   
Sbjct: 122 GHDAENGRQPTPRMIKAI-GAKHVVQIASGQYHCLALTNNGELYAWGSNSYGQLGIGTTS 180

Query: 308 DEL-QPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP 366
           +++  P  IQ+    G+ +  ++ G  H  A+  SG ++ WGK   G LG  D   +  P
Sbjct: 181 EKVPMPTLIQSL--AGVPIAFIACGGNHSFAVSKSGAIFGWGKNTFGQLGLNDLNSRCYP 238

Query: 367 EPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDS 426
             L +L+S     +      +  L + G V+  G   FG LG    G     + PR +  
Sbjct: 239 TQLRTLRSLGVRYISCGDDFSVFLTNEGGVFTCGAGTFGQLG---HGSCSNEIVPRKVFE 295

Query: 427 LRAHHVSQISTGLYHTVV-VTDRGRLFGFGDNERAQLG 463
           L    ++QI+ G  HT+  V  RG+++GFG     QLG
Sbjct: 296 LMGSKITQIACGRRHTLAFVPSRGKIYGFGLGGVGQLG 333



 Score =  119 bits (298), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 88/298 (29%), Positives = 144/298 (48%), Gaps = 6/298 (2%)

Query: 114 MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +++  G  HTL ++    +++CG++  G LGH  +T       R+       +  +S   
Sbjct: 39  VRVECGTSHTLFLTKEGKMYACGNNDHGQLGHDLDTLPNKRPQRLTSLENYIITCISCGT 98

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            H+  +   GQVF+ G N+    GH   N     PR+++A+      Q+ +G      LT
Sbjct: 99  AHSLALTNWGQVFSWGSNAVGQLGHDAENGRQPTPRMIKAIGAKHVVQIASGQYHCLALT 158

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDR-PTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
             G ++  GSN++GQLG G T ++ P P  I  L  V  +  IA G ++  AV+ +G ++
Sbjct: 159 NNGELYAWGSNSYGQLGIGTTSEKVPMPTLIQSLAGV-PIAFIACGGNHSFAVSKSGAIF 217

Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 351
            +G  +   LG  + +    P  ++T R  G+    +S GD+  V L + G V+T G G 
Sbjct: 218 GWGKNTFGQLGLNDLNSRCYPTQLRTLRSLGVRY--ISCGDDFSVFLTNEGGVFTCGAGT 275

Query: 352 CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDT-GSVYGFGWMGFGSLG 408
            G LGHG   ++ +P  +  L      Q+   +R T   V + G +YGFG  G G LG
Sbjct: 276 FGQLGHGSCSNEIVPRKVFELMGSKITQIACGRRHTLAFVPSRGKIYGFGLGGVGQLG 333



 Score =  111 bits (277), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 78/245 (31%), Positives = 125/245 (51%), Gaps = 5/245 (2%)

Query: 116 ITTGRYHTLLISN-SSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           I+ G  H+L ++N   VFS GS+  G LGH  E  +  +   I    A HVVQ+++ + H
Sbjct: 94  ISCGTAHSLALTNWGQVFSWGSNAVGQLGHDAENGRQPTPRMIKAIGAKHVVQIASGQYH 153

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 234
              +  +G+++  G NS    G   T+  +  P L+++L GVP   +  G N +  ++  
Sbjct: 154 CLALTNNGELYAWGSNSYGQLGIGTTSEKVPMPTLIQSLAGVPIAFIACGGNHSFAVSKS 213

Query: 235 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 294
           G +   G NT GQLG  D   R  P  +  L  +G V  I+ G  + + +T  G V++ G
Sbjct: 214 GAIFGWGKNTFGQLGLNDLNSRCYPTQLRTLRSLG-VRYISCGDDFSVFLTNEGGVFTCG 272

Query: 295 SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA-LDSSGYVYTWGKGYCG 353
           +G+   LGHG   +E+ PR +  F   G  + +++ G  H +A + S G +Y +G G  G
Sbjct: 273 AGTFGQLGHGSCSNEIVPRKV--FELMGSKITQIACGRRHTLAFVPSRGKIYGFGLGGVG 330

Query: 354 ALGHG 358
            LG G
Sbjct: 331 QLGIG 335



 Score = 92.0 bits (227), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 67/244 (27%), Positives = 117/244 (47%), Gaps = 9/244 (3%)

Query: 237 VHTCGSNTHGQLGHGDTLDRPT--PKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 294
           ++  G+  HG+LG G   +     P+ +    +   VV++  G S+ L +T  G +Y+ G
Sbjct: 3   IYCWGNTAHGELGLGGIEEEQVMVPRKM-DWSQADEVVRVECGTSHTLFLTKEGKMYACG 61

Query: 295 SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVR-VSAGDEHVVALDSSGYVYTWGKGYCG 353
           +  +  LGH    D L  +  Q       +++  +S G  H +AL + G V++WG    G
Sbjct: 62  NNDHGQLGH--DLDTLPNKRPQRLTSLENYIITCISCGTAHSLALTNWGQVFSWGSNAVG 119

Query: 354 ALGHGDEIDKT-LPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDR 412
            LGH  E  +   P  + ++ +   VQ+ + +     L + G +Y +G   +G LG    
Sbjct: 120 QLGHDAENGRQPTPRMIKAIGAKHVVQIASGQYHCLALTNNGELYAWGSNSYGQLGIGT- 178

Query: 413 GVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLE 472
             S+KV  P ++ SL    ++ I+ G  H+  V+  G +FG+G N   QLG + L     
Sbjct: 179 -TSEKVPMPTLIQSLAGVPIAFIACGGNHSFAVSKSGAIFGWGKNTFGQLGLNDLNSRCY 237

Query: 473 PTEI 476
           PT++
Sbjct: 238 PTQL 241



 Score = 88.6 bits (218), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 66/206 (32%), Positives = 105/206 (50%), Gaps = 6/206 (2%)

Query: 114 MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +QI +G+YH L L +N  +++ GS+  G LG G  + +    T I   +   +  ++   
Sbjct: 145 VQIASGQYHCLALTNNGELYAWGSNSYGQLGIGTTSEKVPMPTLIQSLAGVPIAFIACGG 204

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
           NH+  V +SG +F  G N+    G  D N   + P  +  L+ +  + ++ G +F+ FLT
Sbjct: 205 NHSFAVSKSGAIFGWGKNTFGQLGLNDLNSRCY-PTQLRTLRSLGVRYISCGDDFSVFLT 263

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS-VVQIAAGPSYMLA-VTGNGVV 290
             G V TCG+ T GQLGHG   +   P+ +   E +GS + QIA G  + LA V   G +
Sbjct: 264 NEGGVFTCGAGTFGQLGHGSCSNEIVPRKV--FELMGSKITQIACGRRHTLAFVPSRGKI 321

Query: 291 YSFGSGSNFCLGHGEQHDELQPRAIQ 316
           Y FG G    LG G   +   P+ ++
Sbjct: 322 YGFGLGGVGQLGIGMVGNHSTPQIVR 347



 Score = 58.9 bits (141), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 43/140 (30%), Positives = 67/140 (47%), Gaps = 5/140 (3%)

Query: 344 VYTWGKGYCGALGHG--DEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGW 401
           +Y WG    G LG G  +E    +P  +   ++   V+V      T  L   G +Y  G 
Sbjct: 3   IYCWGNTAHGELGLGGIEEEQVMVPRKMDWSQADEVVRVECGTSHTLFLTKEGKMYACGN 62

Query: 402 MGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQ 461
              G LG     + +K  RP+ L SL  + ++ IS G  H++ +T+ G++F +G N   Q
Sbjct: 63  NDHGQLGHDLDTLPNK--RPQRLTSLENYIITCISCGTAHSLALTNWGQVFSWGSNAVGQ 120

Query: 462 LGHDTLRGCLEPTEIFIQEM 481
           LGHD   G  +PT   I+ +
Sbjct: 121 LGHDAENG-RQPTPRMIKAI 139


>gi|147899463|ref|NP_001085604.1| HECT and RLD domain containing E3 ubiquitin protein ligase 3
           [Xenopus laevis]
 gi|49256123|gb|AAH73004.1| MGC82587 protein [Xenopus laevis]
          Length = 1050

 Score =  139 bits (349), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 95/261 (36%), Positives = 137/261 (52%), Gaps = 10/261 (3%)

Query: 219 KQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGP 278
           K+V  G   T FL   G V++CG N  GQLGH      P P  +A L E   +  IA G 
Sbjct: 37  KEVACGGKHTLFLMEDGQVYSCGWNGEGQLGHSHEGTHPAP--VATLAE-EHIKHIACGQ 93

Query: 279 SYMLAVTGNGVVYSFGSGSNFCLGHGE-QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
           S+ LA++  G +YS+G+G++  LGH   +H    PR I+   ++ I   ++S GD+H +A
Sbjct: 94  SHSLALSLQGNLYSWGAGNDGQLGHATVEHYSRIPRIIKKLSQQKIQ--QMSCGDDHCLA 151

Query: 338 LDSSGYVYTWGKGYCGALGHGDE-IDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSV 396
           L   G ++TWG+   G LG G+  I ++ P+ + SL+     QV A    +F L  +G+V
Sbjct: 152 LGDDGQLFTWGQNTHGQLGLGNGFISQSSPQKVKSLEGIPLAQVTAGGSHSFALSLSGAV 211

Query: 397 YGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGD 456
           +G+G    G LG  D  V +    P  +  LR H V  IS G  HT ++T  G LF FG 
Sbjct: 212 FGWGKNSAGQLGLNDEQVKET---PCHVKPLRTHKVVYISCGEEHTAILTKAGGLFTFGA 268

Query: 457 NERAQLGHDTLRGCLEPTEIF 477
               QLGHD+L   + P  + 
Sbjct: 269 GGSGQLGHDSLHNEINPRRVL 289



 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 100/334 (29%), Positives = 160/334 (47%), Gaps = 15/334 (4%)

Query: 135 GSSLCGVLGHGPETTQCVSFT-RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSF 193
           G S  G LG+G      VS      F  A  V +V+    H  F+++ GQV++CG N   
Sbjct: 5   GHSAFGQLGNGHSLKNAVSEPCACTFSLATCVKEVACGGKHTLFLMEDGQVYSCGWNGEG 64

Query: 194 CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDT 253
             GH         P  V  L     K +  G + +  L+++G++++ G+   GQLGH  T
Sbjct: 65  QLGHSHEGT---HPAPVATLAEEHIKHIACGQSHSLALSLQGNLYSWGAGNDGQLGHA-T 120

Query: 254 LDRPT--PKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH-DEL 310
           ++  +  P+ I  L +   + Q++ G  + LA+  +G ++++G  ++  LG G     + 
Sbjct: 121 VEHYSRIPRIIKKLSQ-QKIQQMSCGDDHCLALGDDGQLFTWGQNTHGQLGLGNGFISQS 179

Query: 311 QPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLS 370
            P+ +++   +GI + +V+AG  H  AL  SG V+ WGK   G LG  DE  K  P  + 
Sbjct: 180 SPQKVKSL--EGIPLAQVTAGGSHSFALSLSGAVFGWGKNSAGQLGLNDEQVKETPCHVK 237

Query: 371 SLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAH 430
            L++H  V +   +  T +L   G ++ FG  G G LG          + PR +  L   
Sbjct: 238 PLRTHKVVYISCGEEHTAILTKAGGLFTFGAGGSGQLGHDSL---HNEINPRRVLELMGS 294

Query: 431 HVSQISTGLYHTVV-VTDRGRLFGFGDNERAQLG 463
            VSQI+ G  HT+  V   G L+ FG  +  QLG
Sbjct: 295 EVSQIACGRKHTLAFVPSSGTLYAFGCGDLGQLG 328



 Score =  108 bits (271), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 82/297 (27%), Positives = 143/297 (48%), Gaps = 9/297 (3%)

Query: 115 QITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
           ++  G  HTL L+ +  V+SCG +  G LGH  E T       +   +  H+  ++  ++
Sbjct: 38  EVACGGKHTLFLMEDGQVYSCGWNGEGQLGHSHEGTHPAPVATL---AEEHIKHIACGQS 94

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
           H+  +   G +++ G  +    GH         PR+++ L     +Q++ G +    L  
Sbjct: 95  HSLALSLQGNLYSWGAGNDGQLGHATVEHYSRIPRIIKKLSQQKIQQMSCGDDHCLALGD 154

Query: 234 RGHVHTCGSNTHGQLGHGD-TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
            G + T G NTHGQLG G+  + + +P+ +  LE +  + Q+ AG S+  A++ +G V+ 
Sbjct: 155 DGQLFTWGQNTHGQLGLGNGFISQSSPQKVKSLEGI-PLAQVTAGGSHSFALSLSGAVFG 213

Query: 293 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 352
           +G  S   LG  ++  +  P  ++  R     VV +S G+EH   L  +G ++T+G G  
Sbjct: 214 WGKNSAGQLGLNDEQVKETPCHVKPLRTH--KVVYISCGEEHTAILTKAGGLFTFGAGGS 271

Query: 353 GALGHGDEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLG 408
           G LGH    ++  P  +  L      Q+ C RK     +  +G++Y FG    G LG
Sbjct: 272 GQLGHDSLHNEINPRRVLELMGSEVSQIACGRKHTLAFVPSSGTLYAFGCGDLGQLG 328



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 67/254 (26%), Positives = 104/254 (40%), Gaps = 53/254 (20%)

Query: 116 ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           I  G+ H+L +S   +++S G+   G LGH            I   S   + Q+S  ++H
Sbjct: 89  IACGQSHSLALSLQGNLYSWGAGNDGQLGHATVEHYSRIPRIIKKLSQQKIQQMSCGDDH 148

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 234
              +   GQ+FT G N+    G  +       P+ V++L+G+P  QVTAG + +  L++ 
Sbjct: 149 CLALGDDGQLFTWGQNTHGQLGLGNGFISQSSPQKVKSLEGIPLAQVTAGGSHSFALSLS 208

Query: 235 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL----------------------------- 265
           G V   G N+ GQLG  D   + TP  + PL                             
Sbjct: 209 GAVFGWGKNSAGQLGLNDEQVKETPCHVKPLRTHKVVYISCGEEHTAILTKAGGLFTFGA 268

Query: 266 ---------------------EEVGS-VVQIAAGPSYMLA-VTGNGVVYSFGSGSNFCLG 302
                                E +GS V QIA G  + LA V  +G +Y+FG G    LG
Sbjct: 269 GGSGQLGHDSLHNEINPRRVLELMGSEVSQIACGRKHTLAFVPSSGTLYAFGCGDLGQLG 328

Query: 303 HGEQHDELQPRAIQ 316
            G +++   P  ++
Sbjct: 329 TGHENNVKCPTVVK 342



 Score = 59.7 bits (143), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 38/125 (30%), Positives = 58/125 (46%), Gaps = 9/125 (7%)

Query: 347 WGKGYCGALGHGDEIDKTLPEPLS---SLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 403
           WG    G LG+G  +   + EP +   SL + +    C  K   F++ D G VY  GW G
Sbjct: 4   WGHSAFGQLGNGHSLKNAVSEPCACTFSLATCVKEVACGGKHTLFLMED-GQVYSCGWNG 62

Query: 404 FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 463
            G LG    G       P  + +L   H+  I+ G  H++ ++ +G L+ +G     QLG
Sbjct: 63  EGQLGHSHEGT-----HPAPVATLAEEHIKHIACGQSHSLALSLQGNLYSWGAGNDGQLG 117

Query: 464 HDTLR 468
           H T+ 
Sbjct: 118 HATVE 122


>gi|443688897|gb|ELT91442.1| hypothetical protein CAPTEDRAFT_169244 [Capitella teleta]
          Length = 1060

 Score =  139 bits (349), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 106/353 (30%), Positives = 168/353 (47%), Gaps = 13/353 (3%)

Query: 128 NSSVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSASENHAAFVLQSGQVFT 186
            SSV   GS   G LG G    + V+  R I       VV ++    H  FV + G+V +
Sbjct: 8   KSSVLCWGSLTHGQLGLGGLEEETVTLPREIRSFCNVEVVHIACGLQHTLFVKKDGRVLS 67

Query: 187 CGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHG 246
           CG+N     GH    +P  RP L+++L      Q ++G   +  LT  G V T GSN   
Sbjct: 68  CGNNDYGQLGHE---KPCKRPALIDSLGERNVLQASSGTKHSTVLTDAGQVFTWGSNEDN 124

Query: 247 QLGHG--DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHG 304
           QLG G  D+     P+ +  L +   VVQ+A G ++ + +T  G +Y++GS ++  LG  
Sbjct: 125 QLGRGQVDSASTSIPRMVRGLAD-HKVVQVACGSAHTVGLTATGQIYTWGSNNHGQLGLA 183

Query: 305 EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKT 364
            +  + +P+ +      G+ +VRV+AG +H + L  SG ++ WG    G LG GD+ D+ 
Sbjct: 184 NKTPQNEPQWVSCI--SGLPIVRVAAGADHNLVLTISGALFAWGCNSFGQLGVGDDQDRG 241

Query: 365 LPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRIL 424
            P  + +L++     +      +  L   G V+ FG   +G LG      S+  L PR +
Sbjct: 242 APTLVKTLRNQGICALACGDDHSLALTRDGGVFTFGAGMYGQLG---HNTSNNELLPRKV 298

Query: 425 DSLRAHHVSQISTGLYHTVV-VTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 476
             L    V+QI+ G  H++  V   GR++ FG     QLG  +    + P  +
Sbjct: 299 FELMGSSVTQIACGRKHSIAYVPSSGRVYVFGLGGNGQLGTGSTVNRMSPAMV 351



 Score =  132 bits (332), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 96/298 (32%), Positives = 145/298 (48%), Gaps = 9/298 (3%)

Query: 114 MQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           + I  G  HTL +  +  V SCG++  G LGH      C     I+     +V+Q S+  
Sbjct: 47  VHIACGLQHTLFVKKDGRVLSCGNNDYGQLGH---EKPCKRPALIDSLGERNVLQASSGT 103

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFR-PRLVEALKGVPCKQVTAGLNFTGFL 231
            H+  +  +GQVFT G N     G    +      PR+V  L      QV  G   T  L
Sbjct: 104 KHSTVLTDAGQVFTWGSNEDNQLGRGQVDSASTSIPRMVRGLADHKVVQVACGSAHTVGL 163

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
           T  G ++T GSN HGQLG  +   +  P+ ++ +  +  +V++AAG  + L +T +G ++
Sbjct: 164 TATGQIYTWGSNNHGQLGLANKTPQNEPQWVSCISGL-PIVRVAAGADHNLVLTISGALF 222

Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 351
           ++G  S   LG G+  D   P  ++T R +GI    ++ GD+H +AL   G V+T+G G 
Sbjct: 223 AWGCNSFGQLGVGDDQDRGAPTLVKTLRNQGI--CALACGDDHSLALTRDGGVFTFGAGM 280

Query: 352 CGALGHGDEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLG 408
            G LGH    ++ LP  +  L      Q+ C RK     +  +G VY FG  G G LG
Sbjct: 281 YGQLGHNTSNNELLPRKVFELMGSSVTQIACGRKHSIAYVPSSGRVYVFGLGGNGQLG 338



 Score =  119 bits (299), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 85/277 (30%), Positives = 136/277 (49%), Gaps = 18/277 (6%)

Query: 207 PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 266
           PR + +   V    +  GL  T F+   G V +CG+N +GQLGH     RP     A ++
Sbjct: 35  PREIRSFCNVEVVHIACGLQHTLFVKKDGRVLSCGNNDYGQLGHEKPCKRP-----ALID 89

Query: 267 EVG--SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH 324
            +G  +V+Q ++G  +   +T  G V+++GS  +  LG G Q D       +  R    H
Sbjct: 90  SLGERNVLQASSGTKHSTVLTDAGQVFTWGSNEDNQLGRG-QVDSASTSIPRMVRGLADH 148

Query: 325 -VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCAR 383
            VV+V+ G  H V L ++G +YTWG    G LG  ++  +  P+ +S +     V+V A 
Sbjct: 149 KVVQVACGSAHTVGLTATGQIYTWGSNNHGQLGLANKTPQNEPQWVSCISGLPIVRVAAG 208

Query: 384 KRKTFVLVDTGSVYGFGWMGFGSLGF---PDRGVSDKVLRPRILDSLRAHHVSQISTGLY 440
                VL  +G+++ +G   FG LG     DRG       P ++ +LR   +  ++ G  
Sbjct: 209 ADHNLVLTISGALFAWGCNSFGQLGVGDDQDRGA------PTLVKTLRNQGICALACGDD 262

Query: 441 HTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF 477
           H++ +T  G +F FG     QLGH+T    L P ++F
Sbjct: 263 HSLALTRDGGVFTFGAGMYGQLGHNTSNNELLPRKVF 299



 Score =  118 bits (296), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 85/256 (33%), Positives = 134/256 (52%), Gaps = 7/256 (2%)

Query: 114 MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAH-VVQVSAS 171
           +Q ++G  H+ +++++  VF+ GS+    LG G   +   S  R+    A H VVQV+  
Sbjct: 97  LQASSGTKHSTVLTDAGQVFTWGSNEDNQLGRGQVDSASTSIPRMVRGLADHKVVQVACG 156

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
             H   +  +GQ++T G N+    G  +   P   P+ V  + G+P  +V AG +    L
Sbjct: 157 SAHTVGLTATGQIYTWGSNNHGQLGLANKT-PQNEPQWVSCISGLPIVRVAAGADHNLVL 215

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
           TI G +   G N+ GQLG GD  DR  P  +  L   G +  +A G  + LA+T +G V+
Sbjct: 216 TISGALFAWGCNSFGQLGVGDDQDRGAPTLVKTLRNQG-ICALACGDDHSLALTRDGGVF 274

Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA-LDSSGYVYTWGKG 350
           +FG+G    LGH   ++EL PR +  F   G  V +++ G +H +A + SSG VY +G G
Sbjct: 275 TFGAGMYGQLGHNTSNNELLPRKV--FELMGSSVTQIACGRKHSIAYVPSSGRVYVFGLG 332

Query: 351 YCGALGHGDEIDKTLP 366
             G LG G  +++  P
Sbjct: 333 GNGQLGTGSTVNRMSP 348



 Score = 86.3 bits (212), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 71/235 (30%), Positives = 108/235 (45%), Gaps = 12/235 (5%)

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPT--PKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 290
           ++  V   GS THGQLG G   +     P+ I     V  VV IA G  + L V  +G V
Sbjct: 7   LKSSVLCWGSLTHGQLGLGGLEEETVTLPREIRSFCNV-EVVHIACGLQHTLFVKKDGRV 65

Query: 291 YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKG 350
            S G+     LGH +     +P  I +   +  +V++ S+G +H   L  +G V+TWG  
Sbjct: 66  LSCGNNDYGQLGHEKPCK--RPALIDSLGER--NVLQASSGTKHSTVLTDAGQVFTWGSN 121

Query: 351 YCGALGHG--DEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLG 408
               LG G  D    ++P  +  L  H  VQV      T  L  TG +Y +G    G LG
Sbjct: 122 EDNQLGRGQVDSASTSIPRMVRGLADHKVVQVACGSAHTVGLTATGQIYTWGSNNHGQLG 181

Query: 409 FPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 463
             ++   ++   P+ +  +    + +++ G  H +V+T  G LF +G N   QLG
Sbjct: 182 LANKTPQNE---PQWVSCISGLPIVRVAAGADHNLVLTISGALFAWGCNSFGQLG 233


>gi|338534909|ref|YP_004668243.1| RCC1 repeat-containing protein [Myxococcus fulvus HW-1]
 gi|337261005|gb|AEI67165.1| RCC1 repeat-containing protein [Myxococcus fulvus HW-1]
          Length = 862

 Score =  139 bits (349), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 112/369 (30%), Positives = 165/369 (44%), Gaps = 27/369 (7%)

Query: 112 GNMQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSA 170
           G   +  GR+HT  +  + +V++ G ++ G LG G  T +    T +  P    V  ++A
Sbjct: 58  GVTAVAAGRHHTFAVRQDGTVWAWGLNVWGQLGDGTHTER---HTPVQVPGLTGVTAIAA 114

Query: 171 SENHAAFVLQSGQVFTCGDNSSFCCG---HRDTNRPIFRPRLVEALKGVPCKQVTAGLNF 227
              H   V Q G V+  GDN     G     D + P+  P L           + AG   
Sbjct: 115 GRRHTFAVSQDGTVWAWGDNDWGQLGDGTRADRHTPVQLPELTG------VTAIAAGRRH 168

Query: 228 TGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN 287
           T  +   G V   G N  GQLG G   +R TP  +  L     V  IAAG  + LAV  +
Sbjct: 169 TFAVRQDGTVWAWGDNAWGQLGDGTRTNRLTPVQVPGLT---GVTAIAAGDYHTLAVRQD 225

Query: 288 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 347
           G V+++G+ +   LG G   + L P  +         V  +SAG+ H VA+   G V+ W
Sbjct: 226 GTVWAWGNNALGQLGDGTYTERLTPVQVPGL----TGVTAISAGESHTVAVRQDGTVWAW 281

Query: 348 GKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSL 407
           G    G LG G   D+  P  +  L    A  +   +R TF +   G+V+ +G   +G L
Sbjct: 282 GDNVWGQLGDGTRTDRLTPVQVPGLSGVTA--IAEGRRHTFAVRQDGTVWAWGLNFWGQL 339

Query: 408 GFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTL 467
           G   R  SD+ L P  +  L +  V+ I+ G YHT+ V   G ++ +GDN   QLG  T 
Sbjct: 340 GDGTR--SDR-LTPVQVPDLTS--VTAIAAGDYHTLAVRQDGTVWAWGDNVWGQLGDGTY 394

Query: 468 RGCLEPTEI 476
              L P ++
Sbjct: 395 TDRLTPVQV 403



 Score =  122 bits (307), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 108/356 (30%), Positives = 157/356 (44%), Gaps = 21/356 (5%)

Query: 112 GNMQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSA 170
           G   I  GR HT  +  + +V++ G +  G LG G  T +    T +  P    V  ++A
Sbjct: 158 GVTAIAAGRRHTFAVRQDGTVWAWGDNAWGQLGDGTRTNR---LTPVQVPGLTGVTAIAA 214

Query: 171 SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
            + H   V Q G V+  G+N+    G   T      P  V  L GV    ++AG + T  
Sbjct: 215 GDYHTLAVRQDGTVWAWGNNALGQLGD-GTYTERLTPVQVPGLTGVTA--ISAGESHTVA 271

Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 290
           +   G V   G N  GQLG G   DR TP  +  L     V  IA G  +  AV  +G V
Sbjct: 272 VRQDGTVWAWGDNVWGQLGDGTRTDRLTPVQVPGLS---GVTAIAEGRRHTFAVRQDGTV 328

Query: 291 YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKG 350
           +++G      LG G + D L P  +         V  ++AGD H +A+   G V+ WG  
Sbjct: 329 WAWGLNFWGQLGDGTRSDRLTPVQVPDL----TSVTAIAAGDYHTLAVRQDGTVWAWGDN 384

Query: 351 YCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFP 410
             G LG G   D+  P  +  L    A  + A +  T  +   G+V+ +G   +G LG  
Sbjct: 385 VWGQLGDGTYTDRLTPVQVPGLTGVTA--IAAGESHTVAMRQDGTVWAWGDNVWGQLG-- 440

Query: 411 DRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDT 466
           D   +D+ L P  +  L +  V+ I+ G YHT+ V   G +  +G N   QLG  T
Sbjct: 441 DGTYTDR-LTPVQVPDLTS--VTAIAAGDYHTLAVRQDGTVCAWGFNAYGQLGDGT 493



 Score =  118 bits (296), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 106/377 (28%), Positives = 165/377 (43%), Gaps = 26/377 (6%)

Query: 116 ITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           I  G YHTL +  + +V++ G ++ G LG G  T +    T +  P    V  ++A E+H
Sbjct: 362 IAAGDYHTLAVRQDGTVWAWGDNVWGQLGDGTYTDR---LTPVQVPGLTGVTAIAAGESH 418

Query: 175 AAFVLQSGQVFTCGDNSSFCCG---HRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
              + Q G V+  GDN     G   + D   P+  P L           + AG   T  +
Sbjct: 419 TVAMRQDGTVWAWGDNVWGQLGDGTYTDRLTPVQVPDLTS------VTAIAAGDYHTLAV 472

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
              G V   G N +GQLG G +   P+P  +  L  V     +AAG S+ +AV  +G V+
Sbjct: 473 RQDGTVCAWGFNAYGQLGDGTSSRSPSPVMVPGLTGVTVFAALAAGDSHTVAVMQDGTVW 532

Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 351
           ++G  ++  LG G   D   P  I         V  ++AG  H +A    G V++WG   
Sbjct: 533 AWGLNASGQLGDGATIDRRIPVQIPGL----AGVTAIAAGSAHTLAAGQDGAVWSWGANS 588

Query: 352 CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 411
            G LG G    +  P  +  L    A  + A    +  L+  G+V  +G   +G LG   
Sbjct: 589 YGQLGDGTTTHRLSPVQVPGLTGVSA--MAAGDAHSVALLQDGTVSAWGRNSWGQLG--- 643

Query: 412 RGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCL 471
            G +   L P  +  L    V+ ++ G  HTV +   G ++ +G N+  QLG  T    L
Sbjct: 644 DGTTAARLTPVQVHGLTG--VTAVAAGSLHTVALRQDGTVWAWGYNDLGQLGDGTTTRRL 701

Query: 472 EPTEIFIQEMEEDTGLA 488
            P +  +Q + + T +A
Sbjct: 702 APVQ--VQGLTDVTAIA 716



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 97/320 (30%), Positives = 134/320 (41%), Gaps = 17/320 (5%)

Query: 157 INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGV 216
           +  P    V   +A E H   V Q G  +  G+N+    G   T      P  V  L GV
Sbjct: 1   MQVPGLTGVTATTAGEYHTVAVRQDGTAWAWGNNAWGQLGD-GTRTDRLTPVQVPGLTGV 59

Query: 217 PCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA 276
               V AG + T  +   G V   G N  GQLG G   +R TP  +  L     V  IAA
Sbjct: 60  TA--VAAGRHHTFAVRQDGTVWAWGLNVWGQLGDGTHTERHTPVQVPGLT---GVTAIAA 114

Query: 277 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVV 336
           G  +  AV+ +G V+++G      LG G + D   P  +Q     G  V  ++AG  H  
Sbjct: 115 GRRHTFAVSQDGTVWAWGDNDWGQLGDGTRADRHTP--VQLPELTG--VTAIAAGRRHTF 170

Query: 337 ALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSV 396
           A+   G V+ WG    G LG G   ++  P  +  L    A  + A    T  +   G+V
Sbjct: 171 AVRQDGTVWAWGDNAWGQLGDGTRTNRLTPVQVPGLTGVTA--IAAGDYHTLAVRQDGTV 228

Query: 397 YGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGD 456
           + +G    G LG    G   + L P  +  L    V+ IS G  HTV V   G ++ +GD
Sbjct: 229 WAWGNNALGQLG---DGTYTERLTPVQVPGLTG--VTAISAGESHTVAVRQDGTVWAWGD 283

Query: 457 NERAQLGHDTLRGCLEPTEI 476
           N   QLG  T    L P ++
Sbjct: 284 NVWGQLGDGTRTDRLTPVQV 303



 Score =  105 bits (263), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 102/366 (27%), Positives = 155/366 (42%), Gaps = 21/366 (5%)

Query: 116 ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           +  G  HT+ ++ + +V++ G +  G LG G    + +    +  P  A V  ++A   H
Sbjct: 515 LAAGDSHTVAVMQDGTVWAWGLNASGQLGDGATIDRRIP---VQIPGLAGVTAIAAGSAH 571

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 234
                Q G V++ G NS    G   T   +  P  V  L GV    + AG   +  L   
Sbjct: 572 TLAAGQDGAVWSWGANSYGQLGDGTTTHRL-SPVQVPGLTGVSA--MAAGDAHSVALLQD 628

Query: 235 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 294
           G V   G N+ GQLG G T  R TP  +  L     V  +AAG  + +A+  +G V+++G
Sbjct: 629 GTVSAWGRNSWGQLGDGTTAARLTPVQVHGLT---GVTAVAAGSLHTVALRQDGTVWAWG 685

Query: 295 SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGA 354
                 LG G     L P  +Q        V  ++AG  H VA+   G V+ WG    G 
Sbjct: 686 YNDLGQLGDGTTTRRLAPVQVQGL----TDVTAIAAGYFHTVAVRQDGTVWAWGYNLWGQ 741

Query: 355 LGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGV 414
           LG G    ++ P  +  L    A  + A    T  +   G+V+ +G      LG    G 
Sbjct: 742 LGDGSSTARSTPVQVQELTGVSA--LAAGYAHTVAVKQDGTVWAWGNNSGTQLG---NGS 796

Query: 415 SDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPT 474
           S     P  ++ L    VS ++ G +HT  V+  G  + +G N   Q+G  T      P 
Sbjct: 797 STDRYTPVWVEGLTG--VSALTAGRFHTAAVSPEGFGWAWGRNNFGQVGDGTTADRPRPV 854

Query: 475 EIFIQE 480
           ++ IQE
Sbjct: 855 DVVIQE 860


>gi|357443735|ref|XP_003592145.1| Lateral signaling target protein-like protein [Medicago truncatula]
 gi|355481193|gb|AES62396.1| Lateral signaling target protein-like protein [Medicago truncatula]
          Length = 1238

 Score =  138 bits (348), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 103/324 (31%), Positives = 156/324 (48%), Gaps = 21/324 (6%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V+Q++    HAA V + G++FT G+ S    GH    + + +P LVEAL       V  G
Sbjct: 344 VLQIACGVKHAALVTRQGEMFTWGEESGGRLGH-GVGKNVVQPCLVEALASSTVDFVACG 402

Query: 225 LNFTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSYM 281
              T  +T+ G ++T G  TH  G LGHG  +    PK IA PLE +  V  +  GP + 
Sbjct: 403 EFHTCAVTMAGEIYTWGDGTHNAGLLGHGTDVSHWIPKRIAGPLEGL-QVAFVTCGPWHT 461

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL--- 338
             +T  G +++FG G+   LGHG++ +   PR +++    G+  V V+ G  H  A+   
Sbjct: 462 ALITSTGQLFTFGDGTFGVLGHGDRENISYPREVESL--SGLRTVSVACGVWHTAAIVEV 519

Query: 339 --------DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVL 390
                    SSG ++TWG G    LGHGD+  +  P  +S+L  +   ++      T  L
Sbjct: 520 IVTQSSASISSGKLFTWGDGDKNRLGHGDKDARLEPTCISALIDYNFHRIACGHSLTVGL 579

Query: 391 VDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGR 450
             +G V+  G   +G LG P    SD  L   + D L    V +I+ G YH  V+T R  
Sbjct: 580 TTSGRVFTMGSTVYGQLGNPQ---SDGKLPCLVEDKLAGECVEEIACGAYHVTVLTSRNE 636

Query: 451 LFGFGDNERAQLGHDTLRGCLEPT 474
           ++ +G     +LGH  +     PT
Sbjct: 637 VYTWGKGANGRLGHGDVEDRKTPT 660



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 87/282 (30%), Positives = 128/282 (45%), Gaps = 21/282 (7%)

Query: 116 ITTGRYHTLLISNSS---VFSCGSSLCGVLGHGPETTQCVSFTRINFP-SAAHVVQVSAS 171
           +  G +HT  ++ +     +  G+   G+LGHG + +  +   RI  P     V  V+  
Sbjct: 399 VACGEFHTCAVTMAGEIYTWGDGTHNAGLLGHGTDVSHWIP-KRIAGPLEGLQVAFVTCG 457

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
             H A +  +GQ+FT GD +    GH D    I  PR VE+L G+    V  G+  T  +
Sbjct: 458 PWHTALITSTGQLFTFGDGTFGVLGHGDREN-ISYPREVESLSGLRTVSVACGVWHTAAI 516

Query: 232 T-----------IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 280
                         G + T G     +LGHGD   R  P  I+ L +  +  +IA G S 
Sbjct: 517 VEVIVTQSSASISSGKLFTWGDGDKNRLGHGDKDARLEPTCISALIDY-NFHRIACGHSL 575

Query: 281 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 340
            + +T +G V++ GS     LG+  Q D   P  ++  +  G  V  ++ G  HV  L S
Sbjct: 576 TVGLTTSGRVFTMGSTVYGQLGN-PQSDGKLPCLVED-KLAGECVEEIACGAYHVTVLTS 633

Query: 341 SGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKS-HLAVQVC 381
              VYTWGKG  G LGHGD  D+  P  + +LK  H+    C
Sbjct: 634 RNEVYTWGKGANGRLGHGDVEDRKTPTLVEALKDRHVKYIAC 675



 Score = 89.0 bits (219), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 82/295 (27%), Positives = 132/295 (44%), Gaps = 22/295 (7%)

Query: 190 NSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLG 249
           N S+C    D    I  P+ +E+   +   Q+  G+     +T +G + T G  + G+LG
Sbjct: 320 NVSYCSPRTD----ILLPKPLESNVVLDVLQIACGVKHAALVTRQGEMFTWGEESGGRLG 375

Query: 250 HGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC--LGHGEQH 307
           HG   +   P  +  L    +V  +A G  +  AVT  G +Y++G G++    LGHG   
Sbjct: 376 HGVGKNVVQPCLVEALAS-STVDFVACGEFHTCAVTMAGEIYTWGDGTHNAGLLGHGTDV 434

Query: 308 DELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPE 367
               P+ I     +G+ V  V+ G  H   + S+G ++T+G G  G LGHGD  + + P 
Sbjct: 435 SHWIPKRI-AGPLEGLQVAFVTCGPWHTALITSTGQLFTFGDGTFGVLGHGDRENISYPR 493

Query: 368 PLSSLKSHLAVQVCARKRKTFVLVD-----------TGSVYGFGWMGFGSLGFPDRGVSD 416
            + SL     V V      T  +V+           +G ++ +G      LG  D+   D
Sbjct: 494 EVESLSGLRTVSVACGVWHTAAIVEVIVTQSSASISSGKLFTWGDGDKNRLGHGDK---D 550

Query: 417 KVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCL 471
             L P  + +L  ++  +I+ G   TV +T  GR+F  G     QLG+    G L
Sbjct: 551 ARLEPTCISALIDYNFHRIACGHSLTVGLTTSGRVFTMGSTVYGQLGNPQSDGKL 605



 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 68/236 (28%), Positives = 111/236 (47%), Gaps = 19/236 (8%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSASEN 173
           +T G +HT LI+++  +F+ G    GVLGHG    + +S+ R +   S    V V+    
Sbjct: 454 VTCGPWHTALITSTGQLFTFGDGTFGVLGHGDR--ENISYPREVESLSGLRTVSVACGVW 511

Query: 174 HAAFVLQ-----------SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 222
           H A +++           SG++FT GD      GH D +  +  P  + AL      ++ 
Sbjct: 512 HTAAIVEVIVTQSSASISSGKLFTWGDGDKNRLGHGDKDARL-EPTCISALIDYNFHRIA 570

Query: 223 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 282
            G + T  LT  G V T GS  +GQLG+  + D   P  +        V +IA G  ++ 
Sbjct: 571 CGHSLTVGLTTSGRVFTMGSTVYGQLGNPQS-DGKLPCLVEDKLAGECVEEIACGAYHVT 629

Query: 283 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
            +T    VY++G G+N  LGHG+  D   P  ++  + +  HV  ++ G  +  A+
Sbjct: 630 VLTSRNEVYTWGKGANGRLGHGDVEDRKTPTLVEALKDR--HVKYIACGSNYSAAI 683



 Score = 55.5 bits (132), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 44/157 (28%), Positives = 72/157 (45%), Gaps = 6/157 (3%)

Query: 323 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEP--LSSLKSHLAVQV 380
           + V++++ G +H   +   G ++TWG+   G LGHG  + K + +P  + +L S     V
Sbjct: 342 LDVLQIACGVKHAALVTRQGEMFTWGEESGGRLGHG--VGKNVVQPCLVEALASSTVDFV 399

Query: 381 CARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRP-RILDSLRAHHVSQISTGL 439
              +  T  +   G +Y +G  G  + G    G       P RI   L    V+ ++ G 
Sbjct: 400 ACGEFHTCAVTMAGEIYTWG-DGTHNAGLLGHGTDVSHWIPKRIAGPLEGLQVAFVTCGP 458

Query: 440 YHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 476
           +HT ++T  G+LF FGD     LGH        P E+
Sbjct: 459 WHTALITSTGQLFTFGDGTFGVLGHGDRENISYPREV 495


>gi|156365518|ref|XP_001626692.1| predicted protein [Nematostella vectensis]
 gi|156213578|gb|EDO34592.1| predicted protein [Nematostella vectensis]
          Length = 1056

 Score =  138 bits (347), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 112/349 (32%), Positives = 167/349 (47%), Gaps = 14/349 (4%)

Query: 131 VFSCGSSLCGVLGHGPETTQCVSFTRI--NFPSAAHVVQVSASENHAAFVLQSGQVFTCG 188
           +F  G    G LG G    + +S  R+  N   +++V +VS   NH AF+ + G V+TCG
Sbjct: 1   MFCWGKCSEGQLGVGETEQEFISTPRLLENLEFSSNVREVSCGWNHTAFLCKDGTVYTCG 60

Query: 189 DNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQL 248
            N     G   ++     P  V A++     +VT G   T  ++ +G V   G N++GQ+
Sbjct: 61  SNEFGQLGQEKSHT---NPESVHAIETFTITKVTCGKAHTVAVSDQGLVFAWGDNSYGQI 117

Query: 249 GHGDTLDRPT---PKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGE 305
           G G  +       PK +  L ++ SVVQIA G ++ +A+T +G ++ +G  S+  LG G+
Sbjct: 118 GLGSKVKEKVQTIPKMLKGLAKM-SVVQIACGCNHSMALTISGHLFCWGDNSSGQLGIGK 176

Query: 306 QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTL 365
            H  +   A       G+  + +SAG  H  AL SSG ++ WGK   G LG  D  D+ L
Sbjct: 177 THSSMSEPA-PVLSLNGVPFMLISAGGAHSFALSSSGALFGWGKNEYGQLGVHDTTDRPL 235

Query: 366 PEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILD 425
           P  L SL+S     V   ++ T VL   G V+ FG    G LG      +     PR + 
Sbjct: 236 PTLLKSLRSQGVCYVSCGEKHTAVLTSDGGVFTFGCGTSGQLG---HNSNHHEYTPRKVF 292

Query: 426 SLRAHHVSQISTGLYHTV-VVTDRGRLFGFGDNERAQLGHDTLRGCLEP 473
            L    V+QI+ G  HT+ +V   GR++ FG     QLG      C  P
Sbjct: 293 ELMGSVVTQIACGRAHTLALVPSSGRVYTFGRGGDGQLGLGVTNNCNSP 341



 Score =  123 bits (308), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 92/281 (32%), Positives = 148/281 (52%), Gaps = 17/281 (6%)

Query: 204 IFRPRLVEALK-GVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSI 262
           I  PRL+E L+     ++V+ G N T FL   G V+TCGSN  GQLG   +     P+S+
Sbjct: 22  ISTPRLLENLEFSSNVREVSCGWNHTAFLCKDGTVYTCGSNEFGQLGQEKS--HTNPESV 79

Query: 263 APLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRR-- 320
             +E   ++ ++  G ++ +AV+  G+V+++G  S   +G G +  E     +QT  +  
Sbjct: 80  HAIETF-TITKVTCGKAHTVAVSDQGLVFAWGDNSYGQIGLGSKVKE----KVQTIPKML 134

Query: 321 KGI---HVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGD-EIDKTLPEPLSSLKSHL 376
           KG+    VV+++ G  H +AL  SG+++ WG    G LG G      + P P+ SL    
Sbjct: 135 KGLAKMSVVQIACGCNHSMALTISGHLFCWGDNSSGQLGIGKTHSSMSEPAPVLSLNGVP 194

Query: 377 AVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS 436
            + + A    +F L  +G+++G+G   +G LG  D   +D+ L P +L SLR+  V  +S
Sbjct: 195 FMLISAGGAHSFALSSSGALFGWGKNEYGQLGVHD--TTDRPL-PTLLKSLRSQGVCYVS 251

Query: 437 TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF 477
            G  HT V+T  G +F FG     QLGH++      P ++F
Sbjct: 252 CGEKHTAVLTSDGGVFTFGCGTSGQLGHNSNHHEYTPRKVF 292



 Score =  116 bits (290), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 86/248 (34%), Positives = 128/248 (51%), Gaps = 7/248 (2%)

Query: 115 QITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAH--VVQVSAS 171
           ++T G+ HT+ +S+   VF+ G +  G +G G +  + V          A   VVQ++  
Sbjct: 89  KVTCGKAHTVAVSDQGLVFAWGDNSYGQIGLGSKVKEKVQTIPKMLKGLAKMSVVQIACG 148

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
            NH+  +  SG +F  GDNSS   G   T+  +  P  V +L GVP   ++AG   +  L
Sbjct: 149 CNHSMALTISGHLFCWGDNSSGQLGIGKTHSSMSEPAPVLSLNGVPFMLISAGGAHSFAL 208

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
           +  G +   G N +GQLG  DT DRP P  +  L   G V  ++ G  +   +T +G V+
Sbjct: 209 SSSGALFGWGKNEYGQLGVHDTTDRPLPTLLKSLRSQG-VCYVSCGEKHTAVLTSDGGVF 267

Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL-DSSGYVYTWGKG 350
           +FG G++  LGH   H E  PR +  F   G  V +++ G  H +AL  SSG VYT+G+G
Sbjct: 268 TFGCGTSGQLGHNSNHHEYTPRKV--FELMGSVVTQIACGRAHTLALVPSSGRVYTFGRG 325

Query: 351 YCGALGHG 358
             G LG G
Sbjct: 326 GDGQLGLG 333



 Score =  115 bits (288), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 99/339 (29%), Positives = 158/339 (46%), Gaps = 35/339 (10%)

Query: 95  RFLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGH-----GPETT 149
           R L+++E SS++ E S G        +   L  + +V++CGS+  G LG       PE+ 
Sbjct: 26  RLLENLEFSSNVREVSCG------WNHTAFLCKDGTVYTCGSNEFGQLGQEKSHTNPESV 79

Query: 150 QCV-SFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNS--SFCCGHRDTNRPIFR 206
             + +FT         + +V+  + H   V   G VF  GDNS      G +   +    
Sbjct: 80  HAIETFT---------ITKVTCGKAHTVAVSDQGLVFAWGDNSYGQIGLGSKVKEKVQTI 130

Query: 207 PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDT---LDRPTPKSIA 263
           P++++ L  +   Q+  G N +  LTI GH+   G N+ GQLG G T   +  P P  + 
Sbjct: 131 PKMLKGLAKMSVVQIACGCNHSMALTISGHLFCWGDNSSGQLGIGKTHSSMSEPAP--VL 188

Query: 264 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGI 323
            L  V  ++ I+AG ++  A++ +G ++ +G      LG  +  D   P  +++ R +G 
Sbjct: 189 SLNGVPFML-ISAGGAHSFALSSSGALFGWGKNEYGQLGVHDTTDRPLPTLLKSLRSQG- 246

Query: 324 HVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCAR 383
            V  VS G++H   L S G V+T+G G  G LGH     +  P  +  L   +  Q+   
Sbjct: 247 -VCYVSCGEKHTAVLTSDGGVFTFGCGTSGQLGHNSNHHEYTPRKVFELMGSVVTQIACG 305

Query: 384 KRKTFVLV-DTGSVYGFGWMGFGSLGFPDRGVSDKVLRP 421
           +  T  LV  +G VY FG  G G LG    GV++    P
Sbjct: 306 RAHTLALVPSSGRVYTFGRGGDGQLGL---GVTNNCNSP 341


>gi|15238303|ref|NP_199029.1| Regulator of chromosome condensation (RCC1) family with FYVE zinc
           finger domain [Arabidopsis thaliana]
 gi|9757959|dbj|BAB08447.1| TMV resistance protein-like [Arabidopsis thaliana]
 gi|332007389|gb|AED94772.1| Regulator of chromosome condensation (RCC1) family with FYVE zinc
           finger domain [Arabidopsis thaliana]
          Length = 1073

 Score =  138 bits (347), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 100/316 (31%), Positives = 152/316 (48%), Gaps = 21/316 (6%)

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            HAA V + G+VFT G+ S    GH    + +  P+L+E+L       V  G   T  +T
Sbjct: 282 KHAALVSRQGEVFTWGEASGGRLGH-GMGKDVTGPQLIESLAATSIDFVACGEFHTCAVT 340

Query: 233 IRGHVHTCGSNTH--GQLGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSYMLAVTGNGV 289
           + G ++T G  TH  G LGHG  +    PK I+ PLE +  +  ++ GP +   +T  G 
Sbjct: 341 MTGEIYTWGDGTHNAGLLGHGTDVSHWIPKRISGPLEGL-QIASVSCGPWHTALITSTGQ 399

Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL----------- 338
           +++FG G+   LGHG++     PR +++    G+  + V+ G  H  A+           
Sbjct: 400 LFTFGDGTFGVLGHGDKETVFYPREVESL--SGLRTIAVACGVWHAAAIVEVIVTHSSSS 457

Query: 339 DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYG 398
            SSG ++TWG G    LGHGD+  +  P  +S+L  H   +V      T  L  +G VY 
Sbjct: 458 VSSGKLFTWGDGDKSRLGHGDKEPRLKPTCVSALIDHTFHRVACGHSLTVGLTTSGKVYT 517

Query: 399 FGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNE 458
            G   +G LG P+   +D  L   + D L    V +I+ G YH  V+T R  +F +G   
Sbjct: 518 MGSTVYGQLGNPN---ADGKLPCLVEDKLTKDCVEEIACGAYHVAVLTSRNEVFTWGKGA 574

Query: 459 RAQLGHDTLRGCLEPT 474
             +LGH  +     PT
Sbjct: 575 NGRLGHGDVEDRKAPT 590



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 81/273 (29%), Positives = 125/273 (45%), Gaps = 20/273 (7%)

Query: 116 ITTGRYHTLLISNSS---VFSCGSSLCGVLGHGPETTQCVSFTRINFP-SAAHVVQVSAS 171
           +  G +HT  ++ +     +  G+   G+LGHG + +  +   RI+ P     +  VS  
Sbjct: 329 VACGEFHTCAVTMTGEIYTWGDGTHNAGLLGHGTDVSHWIP-KRISGPLEGLQIASVSCG 387

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
             H A +  +GQ+FT GD +    GH D    +F PR VE+L G+    V  G+     +
Sbjct: 388 PWHTALITSTGQLFTFGDGTFGVLGHGD-KETVFYPREVESLSGLRTIAVACGVWHAAAI 446

Query: 232 T-----------IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 280
                         G + T G     +LGHGD   R  P  ++ L +  +  ++A G S 
Sbjct: 447 VEVIVTHSSSSVSSGKLFTWGDGDKSRLGHGDKEPRLKPTCVSALID-HTFHRVACGHSL 505

Query: 281 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 340
            + +T +G VY+ GS     LG+     +L P  ++    K   V  ++ G  HV  L S
Sbjct: 506 TVGLTTSGKVYTMGSTVYGQLGNPNADGKL-PCLVEDKLTKDC-VEEIACGAYHVAVLTS 563

Query: 341 SGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
              V+TWGKG  G LGHGD  D+  P  + +LK
Sbjct: 564 RNEVFTWGKGANGRLGHGDVEDRKAPTLVDALK 596



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 95/352 (26%), Positives = 150/352 (42%), Gaps = 37/352 (10%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHVVQ 167
           I  G  H  L+S    VF+ G +  G LGHG       P+  + ++ T I+F        
Sbjct: 277 IACGVKHAALVSRQGEVFTWGEASGGRLGHGMGKDVTGPQLIESLAATSIDF-------- 328

Query: 168 VSASENHAAFVLQSGQVFTCGD--NSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 225
           V+  E H   V  +G+++T GD  +++   GH          R+   L+G+    V+ G 
Sbjct: 329 VACGEFHTCAVTMTGEIYTWGDGTHNAGLLGHGTDVSHWIPKRISGPLEGLQIASVSCGP 388

Query: 226 NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 285
             T  +T  G + T G  T G LGHGD      P+ +  L  + ++  +A G  +  A+ 
Sbjct: 389 WHTALITSTGQLFTFGDGTFGVLGHGDKETVFYPREVESLSGLRTIA-VACGVWHAAAIV 447

Query: 286 -----------GNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEH 334
                       +G ++++G G    LGHG++   L+P  +        H  RV+ G   
Sbjct: 448 EVIVTHSSSSVSSGKLFTWGDGDKSRLGHGDKEPRLKPTCVSALIDHTFH--RVACGHSL 505

Query: 335 VVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPL-SSLKSHLAVQVCARKRKTFVLVDT 393
            V L +SG VYT G    G LG+ +  D  LP  +   L      ++        VL   
Sbjct: 506 TVGLTTSGKVYTMGSTVYGQLGNPN-ADGKLPCLVEDKLTKDCVEEIACGAYHVAVLTSR 564

Query: 394 GSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVV 445
             V+ +G    G LG  D  V D+   P ++D+L+  HV  I+ G   T  +
Sbjct: 565 NEVFTWGKGANGRLGHGD--VEDRKA-PTLVDALKERHVKNIACGSNFTAAI 613



 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 73/252 (28%), Positives = 116/252 (46%), Gaps = 19/252 (7%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSASEN 173
           ++ G +HT LI+++  +F+ G    GVLGHG + T  V + R +   S    + V+    
Sbjct: 384 VSCGPWHTALITSTGQLFTFGDGTFGVLGHGDKET--VFYPREVESLSGLRTIAVACGVW 441

Query: 174 HAAFVLQ-----------SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 222
           HAA +++           SG++FT GD      GH D   P  +P  V AL      +V 
Sbjct: 442 HAAAIVEVIVTHSSSSVSSGKLFTWGDGDKSRLGHGD-KEPRLKPTCVSALIDHTFHRVA 500

Query: 223 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 282
            G + T  LT  G V+T GS  +GQLG+ +  D   P  +        V +IA G  ++ 
Sbjct: 501 CGHSLTVGLTTSGKVYTMGSTVYGQLGNPNA-DGKLPCLVEDKLTKDCVEEIACGAYHVA 559

Query: 283 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
            +T    V+++G G+N  LGHG+  D   P  +   + +  HV  ++ G     A+    
Sbjct: 560 VLTSRNEVFTWGKGANGRLGHGDVEDRKAPTLVDALKER--HVKNIACGSNFTAAICLHK 617

Query: 343 YVYTWGKGYCGA 354
           +V    +  C A
Sbjct: 618 WVSGTEQSQCSA 629



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 74/289 (25%), Positives = 128/289 (44%), Gaps = 18/289 (6%)

Query: 196 GHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLD 255
           G+  +   +  P+ +E+   +    +  G+     ++ +G V T G  + G+LGHG   D
Sbjct: 252 GYLGSRSDVLIPKPLESNVVLDVHHIACGVKHAALVSRQGEVFTWGEASGGRLGHGMGKD 311

Query: 256 RPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC--LGHGEQHDELQPR 313
              P+ I  L    S+  +A G  +  AVT  G +Y++G G++    LGHG       P+
Sbjct: 312 VTGPQLIESLAAT-SIDFVACGEFHTCAVTMTGEIYTWGDGTHNAGLLGHGTDVSHWIPK 370

Query: 314 AIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
            I +   +G+ +  VS G  H   + S+G ++T+G G  G LGHGD+     P  + SL 
Sbjct: 371 RI-SGPLEGLQIASVSCGPWHTALITSTGQLFTFGDGTFGVLGHGDKETVFYPREVESLS 429

Query: 374 SHLAVQVCARKRKTFVLVDT-----------GSVYGFGWMGFGSLGFPDRGVSDKVLRPR 422
               + V         +V+            G ++ +G      LG  D+   +  L+P 
Sbjct: 430 GLRTIAVACGVWHAAAIVEVIVTHSSSSVSSGKLFTWGDGDKSRLGHGDK---EPRLKPT 486

Query: 423 ILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCL 471
            + +L  H   +++ G   TV +T  G+++  G     QLG+    G L
Sbjct: 487 CVSALIDHTFHRVACGHSLTVGLTTSGKVYTMGSTVYGQLGNPNADGKL 535



 Score = 68.9 bits (167), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 56/189 (29%), Positives = 87/189 (46%), Gaps = 7/189 (3%)

Query: 290 VYSFGSGSNFCLGH-GEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 348
           V  FG+  N  +G+ G + D L P+ +++     +H   ++ G +H   +   G V+TWG
Sbjct: 242 VTKFGADKN--IGYLGSRSDVLIPKPLESNVVLDVH--HIACGVKHAALVSRQGEVFTWG 297

Query: 349 KGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLG 408
           +   G LGHG   D T P+ + SL +     V   +  T  +  TG +Y +G  G  + G
Sbjct: 298 EASGGRLGHGMGKDVTGPQLIESLAATSIDFVACGEFHTCAVTMTGEIYTWG-DGTHNAG 356

Query: 409 FPDRGVSDKVLRP-RILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTL 467
               G       P RI   L    ++ +S G +HT ++T  G+LF FGD     LGH   
Sbjct: 357 LLGHGTDVSHWIPKRISGPLEGLQIASVSCGPWHTALITSTGQLFTFGDGTFGVLGHGDK 416

Query: 468 RGCLEPTEI 476
                P E+
Sbjct: 417 ETVFYPREV 425


>gi|397599967|gb|EJK57568.1| hypothetical protein THAOC_22376, partial [Thalassiosira oceanica]
          Length = 657

 Score =  137 bits (346), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 103/318 (32%), Positives = 157/318 (49%), Gaps = 19/318 (5%)

Query: 83  LNRCNGNWKRVLRFLQSVEHSSDIVETSAGNM--QITTGRYHTLLISNS-SVFSCGSSLC 139
           L   +  WK V R   S+          AG +   +T G YHT  +S+  ++F+ G  + 
Sbjct: 39  LGHGDNGWKYVPRLTHSL----------AGQVITHVTCGSYHTAAVSSKGNLFTWGGGMY 88

Query: 140 GVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRD 199
           G LGHG E+       R++      VV ++    H A V   G ++T GD  +   GH D
Sbjct: 89  GKLGHGNESGHSTP-KRVDSLVGLAVVDIACGSRHTAIVTSRGCLYTWGDKENGVAGHGD 147

Query: 200 TNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTP 259
           T    + P+L+E L G    Q++A    TG LT  G V+T G    G+LGHG   +  +P
Sbjct: 148 TEGHQYTPKLLERLSGKRVVQLSACGFHTGCLTDAGEVYTWGEGKFGRLGHGAERNCHSP 207

Query: 260 KSIAPLEEVGS-VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTF 318
           + +  L  +G   VQI+ G  +   VT +G +Y+FG G +  LGHG++ ++++P  ++  
Sbjct: 208 RLVETL--LGKRPVQISCGGFHSAVVTADGKMYTFGGGEHGQLGHGDKVNKVKPTLVKDL 265

Query: 319 RRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAV 378
              G+ + +++ G  H VAL SS  VYTWG G  G LGHG     + P+ +  L     V
Sbjct: 266 --DGVFLTQITCGWSHSVALTSSHEVYTWGNGDHGKLGHGCGKKVSTPQLVEKLVGQKVV 323

Query: 379 QVCARKRKTFVLVDTGSV 396
            V +    T  LV+  SV
Sbjct: 324 CVASYNEHTACLVEPHSV 341



 Score =  125 bits (315), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 92/284 (32%), Positives = 143/284 (50%), Gaps = 8/284 (2%)

Query: 182 GQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCG 241
           G V+T G       GH D N   + PRL  +L G     VT G   T  ++ +G++ T G
Sbjct: 26  GGVYTWGRGDDGRLGHGD-NGWKYVPRLTHSLAGQVITHVTCGSYHTAAVSSKGNLFTWG 84

Query: 242 SNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCL 301
              +G+LGHG+     TPK +  L  + +VV IA G  +   VT  G +Y++G   N   
Sbjct: 85  GGMYGKLGHGNESGHSTPKRVDSLVGL-AVVDIACGSRHTAIVTSRGCLYTWGDKENGVA 143

Query: 302 GHGE-QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 360
           GHG+ +  +  P+ ++  R  G  VV++SA   H   L  +G VYTWG+G  G LGHG E
Sbjct: 144 GHGDTEGHQYTPKLLE--RLSGKRVVQLSACGFHTGCLTDAGEVYTWGEGKFGRLGHGAE 201

Query: 361 IDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLR 420
            +   P  + +L     VQ+      + V+   G +Y FG    G LG  D+   +KV +
Sbjct: 202 RNCHSPRLVETLLGKRPVQISCGGFHSAVVTADGKMYTFGGGEHGQLGHGDK--VNKV-K 258

Query: 421 PRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 464
           P ++  L    ++QI+ G  H+V +T    ++ +G+ +  +LGH
Sbjct: 259 PTLVKDLDGVFLTQITCGWSHSVALTSSHEVYTWGNGDHGKLGH 302



 Score =  115 bits (288), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 81/244 (33%), Positives = 118/244 (48%), Gaps = 9/244 (3%)

Query: 235 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLAVTGNGVVYSF 293
           G V+T G    G+LGHGD   +  P+    L   G V+  +  G  +  AV+  G ++++
Sbjct: 26  GGVYTWGRGDDGRLGHGDNGWKYVPRLTHSL--AGQVITHVTCGSYHTAAVSSKGNLFTW 83

Query: 294 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 353
           G G    LGHG +     P+ + +    G+ VV ++ G  H   + S G +YTWG    G
Sbjct: 84  GGGMYGKLGHGNESGHSTPKRVDSL--VGLAVVDIACGSRHTAIVTSRGCLYTWGDKENG 141

Query: 354 ALGHGD-EIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDR 412
             GHGD E  +  P+ L  L     VQ+ A    T  L D G VY +G   FG LG    
Sbjct: 142 VAGHGDTEGHQYTPKLLERLSGKRVVQLSACGFHTGCLTDAGEVYTWGEGKFGRLG---H 198

Query: 413 GVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLE 472
           G       PR++++L      QIS G +H+ VVT  G+++ FG  E  QLGH      ++
Sbjct: 199 GAERNCHSPRLVETLLGKRPVQISCGGFHSAVVTADGKMYTFGGGEHGQLGHGDKVNKVK 258

Query: 473 PTEI 476
           PT +
Sbjct: 259 PTLV 262



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 59/189 (31%), Positives = 91/189 (48%), Gaps = 4/189 (2%)

Query: 285 TGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           T  G VY++G G +  LGHG+   +  PR   +    G  +  V+ G  H  A+ S G +
Sbjct: 23  THGGGVYTWGRGDDGRLGHGDNGWKYVPRLTHSL--AGQVITHVTCGSYHTAAVSSKGNL 80

Query: 345 YTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGF 404
           +TWG G  G LGHG+E   + P+ + SL     V +    R T ++   G +Y +G    
Sbjct: 81  FTWGGGMYGKLGHGNESGHSTPKRVDSLVGLAVVDIACGSRHTAIVTSRGCLYTWGDKEN 140

Query: 405 GSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 464
           G  G  D         P++L+ L    V Q+S   +HT  +TD G ++ +G+ +  +LGH
Sbjct: 141 GVAGHGD--TEGHQYTPKLLERLSGKRVVQLSACGFHTGCLTDAGEVYTWGEGKFGRLGH 198

Query: 465 DTLRGCLEP 473
              R C  P
Sbjct: 199 GAERNCHSP 207


>gi|302803759|ref|XP_002983632.1| hypothetical protein SELMODRAFT_180358 [Selaginella moellendorffii]
 gi|300148469|gb|EFJ15128.1| hypothetical protein SELMODRAFT_180358 [Selaginella moellendorffii]
          Length = 863

 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 100/316 (31%), Positives = 154/316 (48%), Gaps = 26/316 (8%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V Q++    H A V + G+VF+ G+ S    GH   +  +  P+L+++L     + V  G
Sbjct: 125 VQQIACGVRHTALVTRQGEVFSWGEESGGRLGH-GVDADVAHPQLIDSLASSTVQYVACG 183

Query: 225 LNFTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSI-APLEEVGSVVQIAAGPSYM 281
              +  +T  G ++T G  TH  G LGHG+++   TPK +  PLE V  V  +A GP + 
Sbjct: 184 EYHSCAVTQSGDLYTWGDGTHNFGLLGHGNSISHWTPKRVGGPLEGV-RVSSVACGPWHT 242

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL--- 338
           + VT  G ++SFG G+   LGHG++     PR +++   KG+  +R + G  H  A+   
Sbjct: 243 VLVTSTGQLFSFGDGTFGVLGHGDRKSASMPREVESL--KGLKTLRAACGPWHTAAVVEV 300

Query: 339 ---------DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFV 389
                      SG ++TWG G    LGHGD+  K +P  +++L  H   QV      T  
Sbjct: 301 MSRYSNAGSSLSGKLFTWGDGDKNRLGHGDKEQKLVPTCVAALVDHNFRQVACGHSLTVA 360

Query: 390 LVDTGSVYGFGWMGFGSLGFPD-RGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDR 448
           L  TG +Y  G + +G LG P   G    VLR      L    + ++S G YH   +T +
Sbjct: 361 LTTTGHLYTMGSVSYGQLGDPQATGRLPGVLR------LGRTLIEEVSCGAYHVAALTSK 414

Query: 449 GRLFGFGDNERAQLGH 464
           G +  +G     +LGH
Sbjct: 415 GDVCTWGKGANGRLGH 430



 Score =  102 bits (255), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 89/294 (30%), Positives = 136/294 (46%), Gaps = 21/294 (7%)

Query: 205 FRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP 264
           F PR V +L  +  +Q+  G+  T  +T +G V + G  + G+LGHG   D   P+ I  
Sbjct: 112 FLPRAVRSLVVLDVQQIACGVRHTALVTRQGEVFSWGEESGGRLGHGVDADVAHPQLIDS 171

Query: 265 LEEVGSVVQ-IAAGPSYMLAVTGNGVVYSFGSGS-NF-CLGHGEQHDELQPRAIQTFRRK 321
           L    S VQ +A G  +  AVT +G +Y++G G+ NF  LGHG       P+ +     +
Sbjct: 172 L--ASSTVQYVACGEYHSCAVTQSGDLYTWGDGTHNFGLLGHGNSISHWTPKRVGG-PLE 228

Query: 322 GIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVC 381
           G+ V  V+ G  H V + S+G ++++G G  G LGHGD    ++P  + SLK    ++  
Sbjct: 229 GVRVSSVACGPWHTVLVTSTGQLFSFGDGTFGVLGHGDRKSASMPREVESLKGLKTLRAA 288

Query: 382 ARKRKTFVLVDTGSVYG----------FGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHH 431
                T  +V+  S Y           F W G G       G  ++ L P  + +L  H+
Sbjct: 289 CGPWHTAAVVEVMSRYSNAGSSLSGKLFTW-GDGDKNRLGHGDKEQKLVPTCVAALVDHN 347

Query: 432 VSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDT----LRGCLEPTEIFIQEM 481
             Q++ G   TV +T  G L+  G     QLG       L G L      I+E+
Sbjct: 348 FRQVACGHSLTVALTTTGHLYTMGSVSYGQLGDPQATGRLPGVLRLGRTLIEEV 401



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 89/298 (29%), Positives = 134/298 (44%), Gaps = 24/298 (8%)

Query: 100 VEHSSDIVETSAGNMQ-ITTGRYHTLLISNSS---VFSCGSSLCGVLGHGPETTQCVSFT 155
           V H   I   ++  +Q +  G YH+  ++ S     +  G+   G+LGHG   +      
Sbjct: 163 VAHPQLIDSLASSTVQYVACGEYHSCAVTQSGDLYTWGDGTHNFGLLGHGNSISHWTP-K 221

Query: 156 RINFP-SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALK 214
           R+  P     V  V+    H   V  +GQ+F+ GD +    GH D  +    PR VE+LK
Sbjct: 222 RVGGPLEGVRVSSVACGPWHTVLVTSTGQLFSFGDGTFGVLGHGD-RKSASMPREVESLK 280

Query: 215 GVPCKQVTAGLNFTGFL------------TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSI 262
           G+   +   G   T  +            ++ G + T G     +LGHGD   +  P  +
Sbjct: 281 GLKTLRAACGPWHTAAVVEVMSRYSNAGSSLSGKLFTWGDGDKNRLGHGDKEQKLVPTCV 340

Query: 263 APLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKG 322
           A L +  +  Q+A G S  +A+T  G +Y+ GS S   LG  +    L P  ++  R   
Sbjct: 341 AALVD-HNFRQVACGHSLTVALTTTGHLYTMGSVSYGQLGDPQATGRL-PGVLRLGR--- 395

Query: 323 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQV 380
             +  VS G  HV AL S G V TWGKG  G LGHGD  D+ +P  + +L+     +V
Sbjct: 396 TLIEEVSCGAYHVAALTSKGDVCTWGKGANGRLGHGDAEDRDVPTLVEALRDKQVKKV 453



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 73/252 (28%), Positives = 115/252 (45%), Gaps = 22/252 (8%)

Query: 116 ITTGRYHTLLI-SNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPS-----A 162
           +  G +HT+L+ S   +FS G    GVLGHG       P   + +   +    +      
Sbjct: 235 VACGPWHTVLVTSTGQLFSFGDGTFGVLGHGDRKSASMPREVESLKGLKTLRAACGPWHT 294

Query: 163 AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 222
           A VV+V +  ++A   L SG++FT GD      GH D  + +  P  V AL     +QV 
Sbjct: 295 AAVVEVMSRYSNAGSSL-SGKLFTWGDGDKNRLGHGDKEQKLV-PTCVAALVDHNFRQVA 352

Query: 223 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV--QIAAGPSY 280
            G + T  LT  GH++T GS ++GQLG      R     +  +  +G  +  +++ G  +
Sbjct: 353 CGHSLTVALTTTGHLYTMGSVSYGQLGDPQATGR-----LPGVLRLGRTLIEEVSCGAYH 407

Query: 281 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 340
           + A+T  G V ++G G+N  LGHG+  D   P  ++  R K +  V   +     + L  
Sbjct: 408 VAALTSKGDVCTWGKGANGRLGHGDAEDRDVPTLVEALRDKQVKKVSCGSSFTSAICLHK 467

Query: 341 SGYVYTWGKGYC 352
           SG     G   C
Sbjct: 468 SGPGVGTGNSMC 479



 Score = 71.6 bits (174), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 54/172 (31%), Positives = 81/172 (47%), Gaps = 8/172 (4%)

Query: 308 DELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPE 367
           D   PRA+++     + V +++ G  H   +   G V++WG+   G LGHG + D   P+
Sbjct: 110 DAFLPRAVRSLVV--LDVQQIACGVRHTALVTRQGEVFSWGEESGGRLGHGVDADVAHPQ 167

Query: 368 PLSSLKSHLAVQVCARKRKTFVLVDTGSVY--GFGWMGFGSLGFPDRGVSDKVLRP-RIL 424
            + SL S     V   +  +  +  +G +Y  G G   FG LG    G S     P R+ 
Sbjct: 168 LIDSLASSTVQYVACGEYHSCAVTQSGDLYTWGDGTHNFGLLGH---GNSISHWTPKRVG 224

Query: 425 DSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 476
             L    VS ++ G +HTV+VT  G+LF FGD     LGH   +    P E+
Sbjct: 225 GPLEGVRVSSVACGPWHTVLVTSTGQLFSFGDGTFGVLGHGDRKSASMPREV 276


>gi|222619882|gb|EEE56014.1| hypothetical protein OsJ_04782 [Oryza sativa Japonica Group]
          Length = 1093

 Score =  137 bits (345), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 101/323 (31%), Positives = 159/323 (49%), Gaps = 22/323 (6%)

Query: 157 INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGV 216
           + F     V  +S    HAA V + G++++ G+ S    GH   +  + +P+L+++L  +
Sbjct: 305 LEFAVRLDVQNISCGGRHAALVTKQGEIYSWGEESGGRLGH-GVDCDVAQPKLIDSLAHM 363

Query: 217 PCKQVTAGLNFTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSI-APLEEVGSVVQ 273
             + V  G   T  +T+ G ++T G  T   G LGHG+ +    PK +  PLE +  V  
Sbjct: 364 NIELVACGEYHTCAVTLSGDLYTWGDGTFKFGLLGHGNDVSHWVPKRVDGPLEGI-HVSS 422

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           I+ GP +   VT  G +++FG GS   LGHG++     PR +++   KG+  VR + G  
Sbjct: 423 ISCGPWHTALVTSAGQLFTFGDGSFGVLGHGDRASLSVPREVESL--KGLRTVRAACGVW 480

Query: 334 HVVAL------------DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVC 381
           H  A+             SSG ++TWG G  G LGHGD+  + +P  +++L      QV 
Sbjct: 481 HTAAVVEVMVGNSSSSNCSSGKIFTWGDGDKGRLGHGDKDSRFVPTCVAALVEPNFCQVA 540

Query: 382 ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYH 441
                T  L  +G VY  G   +G LG P    +D +L  R+   L  + V +IS G YH
Sbjct: 541 CGHCLTVALTTSGHVYTMGSAVYGQLGNPQ---ADGLLPVRVEGKLHKNFVEEISCGAYH 597

Query: 442 TVVVTDRGRLFGFGDNERAQLGH 464
             V+T R  ++ +G     +LGH
Sbjct: 598 VAVLTSRTEVYTWGKGANGRLGH 620



 Score =  112 bits (281), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 94/274 (34%), Positives = 128/274 (46%), Gaps = 21/274 (7%)

Query: 116 ITTGRYHTLLISNSS---VFSCGSSLCGVLGHGPETTQCVSFTRINFP-SAAHVVQVSAS 171
           +  G YHT  ++ S     +  G+   G+LGHG + +  V   R++ P    HV  +S  
Sbjct: 368 VACGEYHTCAVTLSGDLYTWGDGTFKFGLLGHGNDVSHWVP-KRVDGPLEGIHVSSISCG 426

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
             H A V  +GQ+FT GD S    GH D    +  PR VE+LKG+   +   G+  T  +
Sbjct: 427 PWHTALVTSAGQLFTFGDGSFGVLGHGD-RASLSVPREVESLKGLRTVRAACGVWHTAAV 485

Query: 232 T------------IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPS 279
                          G + T G    G+LGHGD   R  P  +A L E  +  Q+A G  
Sbjct: 486 VEVMVGNSSSSNCSSGKIFTWGDGDKGRLGHGDKDSRFVPTCVAALVEP-NFCQVACGHC 544

Query: 280 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 339
             +A+T +G VY+ GS     LG+  Q D L P  ++    K   V  +S G  HV  L 
Sbjct: 545 LTVALTTSGHVYTMGSAVYGQLGN-PQADGLLPVRVEGKLHKNF-VEEISCGAYHVAVLT 602

Query: 340 SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
           S   VYTWGKG  G LGHG   DK  P  + +LK
Sbjct: 603 SRTEVYTWGKGANGRLGHGGTDDKNTPTLVEALK 636



 Score = 93.2 bits (230), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 77/279 (27%), Positives = 128/279 (45%), Gaps = 19/279 (6%)

Query: 207 PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 266
           P+ +E    +  + ++ G      +T +G +++ G  + G+LGHG   D   PK I  L 
Sbjct: 302 PKPLEFAVRLDVQNISCGGRHAALVTKQGEIYSWGEESGGRLGHGVDCDVAQPKLIDSLA 361

Query: 267 EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS-NF-CLGHGEQHDELQPRAIQTFRRKGIH 324
            + ++  +A G  +  AVT +G +Y++G G+  F  LGHG       P+ +     +GIH
Sbjct: 362 HM-NIELVACGEYHTCAVTLSGDLYTWGDGTFKFGLLGHGNDVSHWVPKRVDG-PLEGIH 419

Query: 325 VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARK 384
           V  +S G  H   + S+G ++T+G G  G LGHGD    ++P  + SLK    V+     
Sbjct: 420 VSSISCGPWHTALVTSAGQLFTFGDGSFGVLGHGDRASLSVPREVESLKGLRTVRAACGV 479

Query: 385 RKTFVLVDT------------GSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHV 432
             T  +V+             G ++ +G    G LG  D+   D    P  + +L   + 
Sbjct: 480 WHTAAVVEVMVGNSSSSNCSSGKIFTWGDGDKGRLGHGDK---DSRFVPTCVAALVEPNF 536

Query: 433 SQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCL 471
            Q++ G   TV +T  G ++  G     QLG+    G L
Sbjct: 537 CQVACGHCLTVALTTSGHVYTMGSAVYGQLGNPQADGLL 575



 Score = 88.6 bits (218), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 67/222 (30%), Positives = 105/222 (47%), Gaps = 26/222 (11%)

Query: 271 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 330
           V  I+ G  +   VT  G +YS+G  S   LGHG   D  QP+ I +     I +V  + 
Sbjct: 313 VQNISCGGRHAALVTKQGEIYSWGEESGGRLGHGVDCDVAQPKLIDSLAHMNIELV--AC 370

Query: 331 GDEHVVALDSSGYVYTWGKG--YCGALGHGDEIDKTLPE----PLSSLKSHLAVQVCARK 384
           G+ H  A+  SG +YTWG G    G LGHG+++   +P+    PL  +  H++   C   
Sbjct: 371 GEYHTCAVTLSGDLYTWGDGTFKFGLLGHGNDVSHWVPKRVDGPLEGI--HVSSISCG-P 427

Query: 385 RKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV 444
             T ++   G ++ FG   FG LG  DR     +  PR ++SL+     + + G++HT  
Sbjct: 428 WHTALVTSAGQLFTFGDGSFGVLGHGDRA---SLSVPREVESLKGLRTVRAACGVWHTAA 484

Query: 445 VTD------------RGRLFGFGDNERAQLGHDTLRGCLEPT 474
           V +             G++F +GD ++ +LGH        PT
Sbjct: 485 VVEVMVGNSSSSNCSSGKIFTWGDGDKGRLGHGDKDSRFVPT 526



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 68/229 (29%), Positives = 103/229 (44%), Gaps = 26/229 (11%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           I+ G +HT L++++  +F+ G    GVLGHG   +  V    +        V+ +    H
Sbjct: 423 ISCGPWHTALVTSAGQLFTFGDGSFGVLGHGDRASLSVP-REVESLKGLRTVRAACGVWH 481

Query: 175 AAFVLQ------------SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 222
            A V++            SG++FT GD      GH D +   F P  V AL      QV 
Sbjct: 482 TAAVVEVMVGNSSSSNCSSGKIFTWGDGDKGRLGHGDKDS-RFVPTCVAALVEPNFCQVA 540

Query: 223 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS-----VVQIAAG 277
            G   T  LT  GHV+T GS  +GQLG+      P    + P+   G      V +I+ G
Sbjct: 541 CGHCLTVALTTSGHVYTMGSAVYGQLGN------PQADGLLPVRVEGKLHKNFVEEISCG 594

Query: 278 PSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVV 326
             ++  +T    VY++G G+N  LGHG   D+  P  ++  + K +  V
Sbjct: 595 AYHVAVLTSRTEVYTWGKGANGRLGHGGTDDKNTPTLVEALKDKQVRSV 643



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 58/174 (33%), Positives = 87/174 (50%), Gaps = 8/174 (4%)

Query: 306 QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTL 365
           + D L P+ ++   R  + V  +S G  H   +   G +Y+WG+   G LGHG + D   
Sbjct: 296 KMDYLVPKPLEFAVR--LDVQNISCGGRHAALVTKQGEIYSWGEESGGRLGHGVDCDVAQ 353

Query: 366 PEPLSSLKSHLAVQVCA-RKRKTFVLVDTGSVY--GFGWMGFGSLGFPDRGVSDKVLRPR 422
           P+ + SL +H+ +++ A  +  T  +  +G +Y  G G   FG LG  +  VS  V + R
Sbjct: 354 PKLIDSL-AHMNIELVACGEYHTCAVTLSGDLYTWGDGTFKFGLLGHGN-DVSHWVPK-R 410

Query: 423 ILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 476
           +   L   HVS IS G +HT +VT  G+LF FGD     LGH        P E+
Sbjct: 411 VDGPLEGIHVSSISCGPWHTALVTSAGQLFTFGDGSFGVLGHGDRASLSVPREV 464


>gi|380019055|ref|XP_003693433.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
            HERC2-like [Apis florea]
          Length = 4812

 Score =  137 bits (345), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 98/316 (31%), Positives = 154/316 (48%), Gaps = 9/316 (2%)

Query: 161  SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQ 220
            SA   VQ++  E     V   G+V+  G  +    G   T+  +  P L+E+++ V  K+
Sbjct: 3984 SALRPVQLTGGEQTLFAVTADGKVYATGYGAVGRLGIGGTDS-VMVPTLLESIQHVFVKK 4042

Query: 221  V--TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS-VVQIAAG 277
            V   +G      L+  GHV++ G    G+LGHG+ L    PK I  L  +G+ +V IA G
Sbjct: 4043 VAVNSGGKHCLALSSEGHVYSWGEGDDGKLGHGNRLSYDRPKLIEEL--LGTEIVDIACG 4100

Query: 278  PSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
              +  A+T  G +Y++G G    LGHG+  D+L P+ I+  +   +  V   +GD   + 
Sbjct: 4101 GHHSAAITSAGWLYTWGKGRYGRLGHGDSEDQLTPKLIEALQDYKVIDVACGSGDAQTLC 4160

Query: 338  LDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVY 397
            +     V++WG G  G LG G      +P  + SL     V+V    + +  L  +G++Y
Sbjct: 4161 VTDDDNVWSWGDGDYGKLGRGGSDGCKIPMKIESLAGLGVVKVECGSQFSVALTRSGAIY 4220

Query: 398  GFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDN 457
             +G   +  LG    G  D V RPR + +L+   +  I+TG  H V  TD+G +F +GDN
Sbjct: 4221 TWGKGDYHRLG---HGTDDHVRRPRKVAALQGKKIISIATGSLHCVACTDKGEVFTWGDN 4277

Query: 458  ERAQLGHDTLRGCLEP 473
            +  QLG  T      P
Sbjct: 4278 DEGQLGDGTTSALQRP 4293



 Score =  128 bits (321), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 89/274 (32%), Positives = 135/274 (49%), Gaps = 8/274 (2%)

Query: 204  IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 263
            I  P   E L  +    +  G      ++  G ++ CG  T+G+LG GD  +   PK I 
Sbjct: 2955 IKLPVYSEVLSKLKPVHIAGGSKTLFVVSQEGKLYACGEGTNGRLGLGDDSNVCEPKPIP 3014

Query: 264  PLEE-VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKG 322
             L + V   V + +G  + LA+T +G V+S+G G +  LGHG      +PR I++ + K 
Sbjct: 3015 FLSQYVIKKVSVHSGGKHALALTQDGKVFSWGEGEDGKLGHGNSISLDKPRLIESLKSKR 3074

Query: 323  IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVC- 381
            I    ++ G  H  A+ SSG +YTWG G  G LGHGD   ++ P+ + SL     +Q+  
Sbjct: 3075 IR--DIACGSGHSAAITSSGELYTWGLGEYGRLGHGDTATQSKPKLVQSLVGQRIIQIAC 3132

Query: 382  -ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLY 440
             +R  +T  L   G VY +G   FG LG   RG SD    P ++D L    V QI  G  
Sbjct: 3133 GSRDAQTMALTADGLVYSWGDGDFGKLG---RGGSDGCYTPLLIDRLNGLGVVQIECGAQ 3189

Query: 441  HTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPT 474
             ++ +T  G ++ +G  +  +LGH       +PT
Sbjct: 3190 FSLALTKYGEVWTWGKGDYFRLGHGNDHHVRKPT 3223



 Score =  125 bits (314), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 99/325 (30%), Positives = 158/325 (48%), Gaps = 16/325 (4%)

Query: 131  VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE--NHAAFVLQSGQVFTCG 188
            +++CG    G LG G ++  C     I F S   + +VS      HA  + Q G+VF+ G
Sbjct: 2988 LYACGEGTNGRLGLGDDSNVC-EPKPIPFLSQYVIKKVSVHSGGKHALALTQDGKVFSWG 3046

Query: 189  DNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQL 248
            +      GH ++   + +PRL+E+LK    + +  G   +  +T  G ++T G   +G+L
Sbjct: 3047 EGEDGKLGHGNSIS-LDKPRLIESLKSKRIRDIACGSGHSAAITSSGELYTWGLGEYGRL 3105

Query: 249  GHGDTLDRPTPKSIAPLEEVGS-VVQIAAGP--SYMLAVTGNGVVYSFGSGSNFCLGHGE 305
            GHGDT  +  PK +  L  VG  ++QIA G   +  +A+T +G+VYS+G G    LG G 
Sbjct: 3106 GHGDTATQSKPKLVQSL--VGQRIIQIACGSRDAQTMALTADGLVYSWGDGDFGKLGRGG 3163

Query: 306  QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTL 365
                  P  I   R  G+ VV++  G +  +AL   G V+TWGKG    LGHG++     
Sbjct: 3164 SDGCYTPLLID--RLNGLGVVQIECGAQFSLALTKYGEVWTWGKGDYFRLGHGNDHHVRK 3221

Query: 366  PEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILD 425
            P  +  L+    + V         + D G VY +G    G  G    G +    +P ++ 
Sbjct: 3222 PTLVEGLRGKKVIHVAVGALHCLAVTDIGQVYAWGDNDHGQQG---NGTTIVNKKPSLVH 3278

Query: 426  SLRAHHVSQISTGLYHTV--VVTDR 448
             L    V+++S G  H++  V+TD+
Sbjct: 3279 ELDDARVNRVSCGSSHSIAWVLTDQ 3303



 Score =  121 bits (303), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 98/334 (29%), Positives = 158/334 (47%), Gaps = 18/334 (5%)

Query: 118  TGRYHTL--LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHV----VQVSAS 171
            TG   TL  + ++  V++ G    G LG G   +  V        S  HV    V V++ 
Sbjct: 3992 TGGEQTLFAVTADGKVYATGYGAVGRLGIGGTDSVMVPTL---LESIQHVFVKKVAVNSG 4048

Query: 172  ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIF-RPRLVEALKGVPCKQVTAGLNFTGF 230
              H   +   G V++ G+      GH   NR  + RP+L+E L G     +  G + +  
Sbjct: 4049 GKHCLALSSEGHVYSWGEGDDGKLGH--GNRLSYDRPKLIEELLGTEIVDIACGGHHSAA 4106

Query: 231  LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSV-VQIAAGPSYMLAVTGNGV 289
            +T  G ++T G   +G+LGHGD+ D+ TPK I  L++   + V   +G +  L VT +  
Sbjct: 4107 ITSAGWLYTWGKGRYGRLGHGDSEDQLTPKLIEALQDYKVIDVACGSGDAQTLCVTDDDN 4166

Query: 290  VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 349
            V+S+G G    LG G       P  I++    G+ VV+V  G +  VAL  SG +YTWGK
Sbjct: 4167 VWSWGDGDYGKLGRGGSDGCKIPMKIESL--AGLGVVKVECGSQFSVALTRSGAIYTWGK 4224

Query: 350  GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGF 409
            G    LGHG +     P  +++L+    + +           D G V+ +G    G LG 
Sbjct: 4225 GDYHRLGHGTDDHVRRPRKVAALQGKKIISIATGSLHCVACTDKGEVFTWGDNDEGQLG- 4283

Query: 410  PDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV 443
               G +  + RPR++ +L+   +++++ G  HT+
Sbjct: 4284 --DGTTSALQRPRLVHALQGKKITRVACGSAHTL 4315



 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 86/320 (26%), Positives = 150/320 (46%), Gaps = 13/320 (4%)

Query: 155  TRINFPSAAHV------VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPR 208
            ++I  P  + V      V ++        V Q G+++ CG+ ++   G  D +  +  P+
Sbjct: 2953 SKIKLPVYSEVLSKLKPVHIAGGSKTLFVVSQEGKLYACGEGTNGRLGLGDDSN-VCEPK 3011

Query: 209  LVEALKGVPCKQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 266
             +  L     K+V+  +G      LT  G V + G    G+LGHG+++    P+ I  L+
Sbjct: 3012 PIPFLSQYVIKKVSVHSGGKHALALTQDGKVFSWGEGEDGKLGHGNSISLDKPRLIESLK 3071

Query: 267  EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVV 326
                +  IA G  +  A+T +G +Y++G G    LGHG+   + +P+ +Q+   + I  +
Sbjct: 3072 S-KRIRDIACGSGHSAAITSSGELYTWGLGEYGRLGHGDTATQSKPKLVQSLVGQRIIQI 3130

Query: 327  RVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRK 386
               + D   +AL + G VY+WG G  G LG G       P  +  L     VQ+    + 
Sbjct: 3131 ACGSRDAQTMALTADGLVYSWGDGDFGKLGRGGSDGCYTPLLIDRLNGLGVVQIECGAQF 3190

Query: 387  TFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT 446
            +  L   G V+ +G   +  LG    G    V +P +++ LR   V  ++ G  H + VT
Sbjct: 3191 SLALTKYGEVWTWGKGDYFRLG---HGNDHHVRKPTLVEGLRGKKVIHVAVGALHCLAVT 3247

Query: 447  DRGRLFGFGDNERAQLGHDT 466
            D G+++ +GDN+  Q G+ T
Sbjct: 3248 DIGQVYAWGDNDHGQQGNGT 3267



 Score =  101 bits (251), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 72/247 (29%), Positives = 124/247 (50%), Gaps = 12/247 (4%)

Query: 235  GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
            G ++  G N  GQLG   G  +  P   +S++ L  V    Q+  G   + AVT +G VY
Sbjct: 3953 GAIYGWGHNHRGQLGGLEGAKVKLPVLCESLSALRPV----QLTGGEQTLFAVTADGKVY 4008

Query: 292  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 351
            + G G+   LG G     + P  +++ +   +  V V++G +H +AL S G+VY+WG+G 
Sbjct: 4009 ATGYGAVGRLGIGGTDSVMVPTLLESIQHVFVKKVAVNSGGKHCLALSSEGHVYSWGEGD 4068

Query: 352  CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 411
             G LGHG+ +    P+ +  L     V +      +  +   G +Y +G   +G LG   
Sbjct: 4069 DGKLGHGNRLSYDRPKLIEELLGTEIVDIACGGHHSAAITSAGWLYTWGKGRYGRLG--- 4125

Query: 412  RGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG 469
             G S+  L P+++++L+ + V  ++  +G   T+ VTD   ++ +GD +  +LG     G
Sbjct: 4126 HGDSEDQLTPKLIEALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRGGSDG 4185

Query: 470  CLEPTEI 476
            C  P +I
Sbjct: 4186 CKIPMKI 4192



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 72/244 (29%), Positives = 114/244 (46%), Gaps = 10/244 (4%)

Query: 237  VHTCGSNTHGQLG--HGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 294
            V+  G N   QLG   G  +  P    +  L ++  V  IA G   +  V+  G +Y+ G
Sbjct: 2936 VYVWGLNDKDQLGGLKGSKIKLPVYSEV--LSKLKPV-HIAGGSKTLFVVSQEGKLYACG 2992

Query: 295  SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGA 354
             G+N  LG G+  +  +P+ I    +  I  V V +G +H +AL   G V++WG+G  G 
Sbjct: 2993 EGTNGRLGLGDDSNVCEPKPIPFLSQYVIKKVSVHSGGKHALALTQDGKVFSWGEGEDGK 3052

Query: 355  LGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGV 414
            LGHG+ I    P  + SLKS     +      +  +  +G +Y +G   +G LG  D   
Sbjct: 3053 LGHGNSISLDKPRLIESLKSKRIRDIACGSGHSAAITSSGELYTWGLGEYGRLGHGDTAT 3112

Query: 415  SDKVLRPRILDSLRAHHVSQISTGLY--HTVVVTDRGRLFGFGDNERAQLGHDTLRGCLE 472
              K   P+++ SL    + QI+ G     T+ +T  G ++ +GD +  +LG     GC  
Sbjct: 3113 QSK---PKLVQSLVGQRIIQIACGSRDAQTMALTADGLVYSWGDGDFGKLGRGGSDGCYT 3169

Query: 473  PTEI 476
            P  I
Sbjct: 3170 PLLI 3173



 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 81/253 (32%), Positives = 118/253 (46%), Gaps = 13/253 (5%)

Query: 119  GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTR---INFPSAAHVVQVSASENHA 175
            G++   L  +  VFS G    G LGHG      +S  +   I    +  +  ++    H+
Sbjct: 3030 GKHALALTQDGKVFSWGEGEDGKLGHG----NSISLDKPRLIESLKSKRIRDIACGSGHS 3085

Query: 176  AFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN--FTGFLTI 233
            A +  SG+++T G       GH DT     +P+LV++L G    Q+  G     T  LT 
Sbjct: 3086 AAITSSGELYTWGLGEYGRLGHGDTATQ-SKPKLVQSLVGQRIIQIACGSRDAQTMALTA 3144

Query: 234  RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
             G V++ G    G+LG G +    TP  I  L  +G VVQI  G  + LA+T  G V+++
Sbjct: 3145 DGLVYSWGDGDFGKLGRGGSDGCYTPLLIDRLNGLG-VVQIECGAQFSLALTKYGEVWTW 3203

Query: 294  GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 353
            G G  F LGHG  H   +P  ++  R  G  V+ V+ G  H +A+   G VY WG    G
Sbjct: 3204 GKGDYFRLGHGNDHHVRKPTLVEGLR--GKKVIHVAVGALHCLAVTDIGQVYAWGDNDHG 3261

Query: 354  ALGHGDEIDKTLP 366
              G+G  I    P
Sbjct: 3262 QQGNGTTIVNKKP 3274



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 74/267 (27%), Positives = 123/267 (46%), Gaps = 9/267 (3%)

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIF-RPRLVEALKGVPCKQVTAGLNFTGFLT 232
           H   + Q   V++ G+      GH D  R  +  P+L+EAL       +  G  ++  L+
Sbjct: 516 HYLALTQDNSVYSWGNGDGGRLGHGD--RAWYDEPKLIEALVEKNITFIACGSTYSAALS 573

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE-EVGSVVQIAAGPSYMLAVTGNGVVY 291
             G ++T G   +G+LGHG++ +   P  +  L   +   V   +G S  L VT +G+V+
Sbjct: 574 SNGELYTWGRGNYGRLGHGNSDNVMIPTLVTALNGHMVVYVACGSGDSQTLCVTASGIVF 633

Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 351
           S+G G+   LG G       P+ +       I+V +V  G +   AL + G VYTWGKG 
Sbjct: 634 SWGDGNYGKLGRGGCDGSKTPKIVDKLL--DINVAKVYCGGQFSAALTAYGEVYTWGKGE 691

Query: 352 CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 411
              LGHG+E     P+ +  LK+    ++C        L +   +YG+G   +G +   D
Sbjct: 692 AYRLGHGNEDHVRYPKIIDILKTKKVKELCVGNLHVLALTEDQLIYGWGRNDYGQI---D 748

Query: 412 RGVSDKVLRPRILDSLRAHHVSQISTG 438
             +   V  P +  +L   +V  ++ G
Sbjct: 749 PALGTVVPEPTLCPTLSGKNVIGLACG 775



 Score = 99.0 bits (245), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 68/232 (29%), Positives = 110/232 (47%), Gaps = 4/232 (1%)

Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 290
           LT    V++ G+   G+LGHGD      PK I  L E  ++  IA G +Y  A++ NG +
Sbjct: 520 LTQDNSVYSWGNGDGGRLGHGDRAWYDEPKLIEALVE-KNITFIACGSTYSAALSSNGEL 578

Query: 291 YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKG 350
           Y++G G+   LGHG   + + P  +       +  V   +GD   + + +SG V++WG G
Sbjct: 579 YTWGRGNYGRLGHGNSDNVMIPTLVTALNGHMVVYVACGSGDSQTLCVTASGIVFSWGDG 638

Query: 351 YCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFP 410
             G LG G       P+ +  L      +V    + +  L   G VY +G      LG  
Sbjct: 639 NYGKLGRGGCDGSKTPKIVDKLLDINVAKVYCGGQFSAALTAYGEVYTWGKGEAYRLG-- 696

Query: 411 DRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQL 462
             G  D V  P+I+D L+   V ++  G  H + +T+   ++G+G N+  Q+
Sbjct: 697 -HGNEDHVRYPKIIDILKTKKVKELCVGNLHVLALTEDQLIYGWGRNDYGQI 747



 Score = 96.7 bits (239), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 59/188 (31%), Positives = 102/188 (54%), Gaps = 7/188 (3%)

Query: 279 SYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
           ++ LA+T +  VYS+G+G    LGHG++    +P+ I+    K I    ++ G  +  AL
Sbjct: 515 THYLALTQDNSVYSWGNGDGGRLGHGDRAWYDEPKLIEALVEKNITF--IACGSTYSAAL 572

Query: 339 DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVC--ARKRKTFVLVDTGSV 396
            S+G +YTWG+G  G LGHG+  +  +P  +++L  H+ V V   +   +T  +  +G V
Sbjct: 573 SSNGELYTWGRGNYGRLGHGNSDNVMIPTLVTALNGHMVVYVACGSGDSQTLCVTASGIV 632

Query: 397 YGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGD 456
           + +G   +G LG   RG  D    P+I+D L   +V+++  G   +  +T  G ++ +G 
Sbjct: 633 FSWGDGNYGKLG---RGGCDGSKTPKIVDKLLDINVAKVYCGGQFSAALTAYGEVYTWGK 689

Query: 457 NERAQLGH 464
            E  +LGH
Sbjct: 690 GEAYRLGH 697



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 76/272 (27%), Positives = 124/272 (45%), Gaps = 20/272 (7%)

Query: 93   VLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQC 151
            V   L+S++H           + + +G  H L +S+   V+S G    G LGHG      
Sbjct: 4028 VPTLLESIQH------VFVKKVAVNSGGKHCLALSSEGHVYSWGEGDDGKLGHGNR---- 4077

Query: 152  VSFTR---INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPR 208
            +S+ R   I       +V ++   +H+A +  +G ++T G       GH D+   +  P+
Sbjct: 4078 LSYDRPKLIEELLGTEIVDIACGGHHSAAITSAGWLYTWGKGRYGRLGHGDSEDQL-TPK 4136

Query: 209  LVEALKGVPCKQVTAGLNFTGFL--TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 266
            L+EAL+      V  G      L  T   +V + G   +G+LG G +     P  I  L 
Sbjct: 4137 LIEALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRGGSDGCKIPMKIESLA 4196

Query: 267  EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVV 326
             +G VV++  G  + +A+T +G +Y++G G    LGHG      +PR +     +G  ++
Sbjct: 4197 GLG-VVKVECGSQFSVALTRSGAIYTWGKGDYHRLGHGTDDHVRRPRKVAAL--QGKKII 4253

Query: 327  RVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 358
             ++ G  H VA    G V+TWG    G LG G
Sbjct: 4254 SIATGSLHCVACTDKGEVFTWGDNDEGQLGDG 4285



 Score = 85.1 bits (209), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 71/264 (26%), Positives = 123/264 (46%), Gaps = 29/264 (10%)

Query: 117 TTGRYHTLLISNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHVVQVS 169
           + G ++  L  ++SV+S G+   G LGHG       P+  + +    I F        ++
Sbjct: 512 SDGTHYLALTQDNSVYSWGNGDGGRLGHGDRAWYDEPKLIEALVEKNITF--------IA 563

Query: 170 ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG-----VPCKQVTAG 224
               ++A +  +G+++T G  +    GH +++  +  P LV AL G     V C    +G
Sbjct: 564 CGSTYSAALSSNGELYTWGRGNYGRLGHGNSDN-VMIPTLVTALNGHMVVYVACG---SG 619

Query: 225 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 284
            + T  +T  G V + G   +G+LG G      TPK +  L ++ +V ++  G  +  A+
Sbjct: 620 DSQTLCVTASGIVFSWGDGNYGKLGRGGCDGSKTPKIVDKLLDI-NVAKVYCGGQFSAAL 678

Query: 285 TGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           T  G VY++G G  + LGHG +     P+ I   + K   V  +  G+ HV+AL     +
Sbjct: 679 TAYGEVYTWGKGEAYRLGHGNEDHVRYPKIIDILKTK--KVKELCVGNLHVLALTEDQLI 736

Query: 345 YTWGKGYCGALGHGDEIDKTLPEP 368
           Y WG+   G +     +   +PEP
Sbjct: 737 YGWGRNDYGQIDPA--LGTVVPEP 758



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 53/195 (27%), Positives = 85/195 (43%), Gaps = 17/195 (8%)

Query: 281 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 340
           +L+V GN  +  +GS + +            P+ +  F  K I ++   +   H +AL  
Sbjct: 475 ILSVNGNVYMMYYGSETQY------------PQRVYGFSEKPIIMIASHSDGTHYLALTQ 522

Query: 341 SGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 400
              VY+WG G  G LGHGD      P+ + +L       +      +  L   G +Y +G
Sbjct: 523 DNSVYSWGNGDGGRLGHGDRAWYDEPKLIEALVEKNITFIACGSTYSAALSSNGELYTWG 582

Query: 401 WMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDNE 458
              +G LG    G SD V+ P ++ +L  H V  ++  +G   T+ VT  G +F +GD  
Sbjct: 583 RGNYGRLG---HGNSDNVMIPTLVTALNGHMVVYVACGSGDSQTLCVTASGIVFSWGDGN 639

Query: 459 RAQLGHDTLRGCLEP 473
             +LG     G   P
Sbjct: 640 YGKLGRGGCDGSKTP 654


>gi|413951295|gb|AFW83944.1| putative regulator of chromosome condensation (RCC1) family protein
           [Zea mays]
          Length = 1131

 Score =  137 bits (345), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 102/329 (31%), Positives = 160/329 (48%), Gaps = 22/329 (6%)

Query: 151 CVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLV 210
           C+    + F     V  +S    HAA V + G++++ G+ S    GH   +  + +P+L+
Sbjct: 337 CLVPKPLEFAVRLDVQNISCGGRHAALVTKQGEIYSWGEESGGRLGH-GVDCDVSQPKLI 395

Query: 211 EALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSI-APLEE 267
           +AL  +  + V  G   T  +T+ G ++T G  T   G LGHG+ +    PK +  PLE 
Sbjct: 396 DALSHMNIELVACGEYHTCAVTLSGDLYTWGDGTFKFGLLGHGNDISHWVPKHVNGPLEG 455

Query: 268 VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVR 327
           +  V  I+ GP +   VT  G +++FG GS   LGHG++     PR +++   KG+  VR
Sbjct: 456 I-HVSSISCGPWHTAVVTSAGQLFTFGDGSFGVLGHGDRESISVPREVESL--KGLRTVR 512

Query: 328 VSAGDEHVVAL------------DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSH 375
            + G  H  A+             SSG ++TWG G  G LGHGD+  K +P  +++L   
Sbjct: 513 AACGVWHTAAVVEVMAGNSSSSNCSSGKIFTWGDGDKGRLGHGDKGPKLVPTCVAALVEP 572

Query: 376 LAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQI 435
              QV      T  L  +G VY  G   +G LG      +D +L  R+   L  + V +I
Sbjct: 573 NFCQVACGHCLTVALTTSGHVYTMGSAVYGQLG---NAQADGMLPVRVEGKLHKNFVEEI 629

Query: 436 STGLYHTVVVTDRGRLFGFGDNERAQLGH 464
           S G YH  V+T +  ++ +G     +LGH
Sbjct: 630 SCGAYHVAVLTSKTEVYTWGKGANGRLGH 658



 Score =  115 bits (288), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 96/283 (33%), Positives = 132/283 (46%), Gaps = 22/283 (7%)

Query: 116 ITTGRYHTLLISNSS---VFSCGSSLCGVLGHGPETTQCVSFTRINFP-SAAHVVQVSAS 171
           +  G YHT  ++ S     +  G+   G+LGHG + +  V    +N P    HV  +S  
Sbjct: 406 VACGEYHTCAVTLSGDLYTWGDGTFKFGLLGHGNDISHWVP-KHVNGPLEGIHVSSISCG 464

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
             H A V  +GQ+FT GD S    GH D    I  PR VE+LKG+   +   G+  T  +
Sbjct: 465 PWHTAVVTSAGQLFTFGDGSFGVLGHGD-RESISVPREVESLKGLRTVRAACGVWHTAAV 523

Query: 232 T------------IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPS 279
                          G + T G    G+LGHGD   +  P  +A L E  +  Q+A G  
Sbjct: 524 VEVMAGNSSSSNCSSGKIFTWGDGDKGRLGHGDKGPKLVPTCVAALVEP-NFCQVACGHC 582

Query: 280 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 339
             +A+T +G VY+ GS     LG+  Q D + P  ++    K   V  +S G  HV  L 
Sbjct: 583 LTVALTTSGHVYTMGSAVYGQLGNA-QADGMLPVRVEGKLHKNF-VEEISCGAYHVAVLT 640

Query: 340 SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK-SHLAVQVC 381
           S   VYTWGKG  G LGHGD  DK  P  + +LK   + + VC
Sbjct: 641 SKTEVYTWGKGANGRLGHGDTDDKNTPTLVEALKDKQVRIVVC 683



 Score = 91.3 bits (225), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 70/222 (31%), Positives = 106/222 (47%), Gaps = 26/222 (11%)

Query: 271 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 330
           V  I+ G  +   VT  G +YS+G  S   LGHG   D  QP+ I       I +V  + 
Sbjct: 351 VQNISCGGRHAALVTKQGEIYSWGEESGGRLGHGVDCDVSQPKLIDALSHMNIELV--AC 408

Query: 331 GDEHVVALDSSGYVYTWGKG--YCGALGHGDEIDKTLPE----PLSSLKSHLAVQVCARK 384
           G+ H  A+  SG +YTWG G    G LGHG++I   +P+    PL  +  H++   C   
Sbjct: 409 GEYHTCAVTLSGDLYTWGDGTFKFGLLGHGNDISHWVPKHVNGPLEGI--HVSSISCG-P 465

Query: 385 RKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV 444
             T V+   G ++ FG   FG LG  DR   + +  PR ++SL+     + + G++HT  
Sbjct: 466 WHTAVVTSAGQLFTFGDGSFGVLGHGDR---ESISVPREVESLKGLRTVRAACGVWHTAA 522

Query: 445 VTD------------RGRLFGFGDNERAQLGHDTLRGCLEPT 474
           V +             G++F +GD ++ +LGH      L PT
Sbjct: 523 VVEVMAGNSSSSNCSSGKIFTWGDGDKGRLGHGDKGPKLVPT 564



 Score = 72.4 bits (176), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 57/174 (32%), Positives = 87/174 (50%), Gaps = 8/174 (4%)

Query: 306 QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTL 365
           + D L P+ ++   R  + V  +S G  H   +   G +Y+WG+   G LGHG + D + 
Sbjct: 334 KMDCLVPKPLEFAVR--LDVQNISCGGRHAALVTKQGEIYSWGEESGGRLGHGVDCDVSQ 391

Query: 366 PEPLSSLKSHLAVQVCA-RKRKTFVLVDTGSVY--GFGWMGFGSLGFPDRGVSDKVLRPR 422
           P+ + +L SH+ +++ A  +  T  +  +G +Y  G G   FG LG  +  +S  V +  
Sbjct: 392 PKLIDAL-SHMNIELVACGEYHTCAVTLSGDLYTWGDGTFKFGLLGHGN-DISHWVPK-H 448

Query: 423 ILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 476
           +   L   HVS IS G +HT VVT  G+LF FGD     LGH        P E+
Sbjct: 449 VNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGSFGVLGHGDRESISVPREV 502



 Score = 44.3 bits (103), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 46/176 (26%), Positives = 77/176 (43%), Gaps = 9/176 (5%)

Query: 92  RVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQC 151
           R +R    V H++ +VE  AGN   +         S+  +F+ G    G LGHG +  + 
Sbjct: 509 RTVRAACGVWHTAAVVEVMAGNSSSSN-------CSSGKIFTWGDGDKGRLGHGDKGPKL 561

Query: 152 VSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVE 211
           V  T +      +  QV+        +  SG V+T G       G+   +  +   R+  
Sbjct: 562 VP-TCVAALVEPNFCQVACGHCLTVALTTSGHVYTMGSAVYGQLGNAQADG-MLPVRVEG 619

Query: 212 ALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEE 267
            L     ++++ G      LT +  V+T G   +G+LGHGDT D+ TP  +  L++
Sbjct: 620 KLHKNFVEEISCGAYHVAVLTSKTEVYTWGKGANGRLGHGDTDDKNTPTLVEALKD 675



 Score = 42.0 bits (97), Expect = 0.76,   Method: Compositional matrix adjust.
 Identities = 37/127 (29%), Positives = 58/127 (45%), Gaps = 9/127 (7%)

Query: 115 QITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAH---VVQVSA 170
           Q+  G   T+ ++ S  V++ GS++ G LG+     Q      +      H   V ++S 
Sbjct: 576 QVACGHCLTVALTTSGHVYTMGSAVYGQLGNA----QADGMLPVRVEGKLHKNFVEEISC 631

Query: 171 SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
              H A +    +V+T G  ++   GH DT+     P LVEALK    + V  G+NFT  
Sbjct: 632 GAYHVAVLTSKTEVYTWGKGANGRLGHGDTDDK-NTPTLVEALKDKQVRIVVCGINFTAA 690

Query: 231 LTIRGHV 237
           + I   V
Sbjct: 691 ICIHKWV 697


>gi|218189748|gb|EEC72175.1| hypothetical protein OsI_05225 [Oryza sativa Indica Group]
          Length = 1093

 Score =  137 bits (345), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 101/323 (31%), Positives = 159/323 (49%), Gaps = 22/323 (6%)

Query: 157 INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGV 216
           + F     V  +S    HAA V + G++++ G+ S    GH   +  + +P+L+++L  +
Sbjct: 305 LEFAVRLDVQNISCGGRHAALVTKQGEIYSWGEESGGRLGH-GVDCDVAQPKLIDSLAHM 363

Query: 217 PCKQVTAGLNFTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSI-APLEEVGSVVQ 273
             + V  G   T  +T+ G ++T G  T   G LGHG+ +    PK +  PLE +  V  
Sbjct: 364 NIELVACGEYHTCAVTLSGDLYTWGDGTFKFGLLGHGNDVSHWVPKRVDGPLEGI-HVSS 422

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           I+ GP +   VT  G +++FG GS   LGHG++     PR +++   KG+  VR + G  
Sbjct: 423 ISCGPWHTALVTSAGQLFTFGDGSFGVLGHGDRASLSVPREVESL--KGLRTVRAACGVW 480

Query: 334 HVVAL------------DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVC 381
           H  A+             SSG ++TWG G  G LGHGD+  + +P  +++L      QV 
Sbjct: 481 HTAAVVEVMVGNSSSSNCSSGKIFTWGDGDKGRLGHGDKDSRFVPTCVAALVEPNFCQVA 540

Query: 382 ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYH 441
                T  L  +G VY  G   +G LG P    +D +L  R+   L  + V +IS G YH
Sbjct: 541 CGHCLTVALTTSGHVYTMGSAVYGQLGNPQ---ADGLLPVRVEGKLHKNFVEEISCGAYH 597

Query: 442 TVVVTDRGRLFGFGDNERAQLGH 464
             V+T R  ++ +G     +LGH
Sbjct: 598 VAVLTSRTEVYTWGKGANGRLGH 620



 Score =  112 bits (281), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 94/274 (34%), Positives = 128/274 (46%), Gaps = 21/274 (7%)

Query: 116 ITTGRYHTLLISNSS---VFSCGSSLCGVLGHGPETTQCVSFTRINFP-SAAHVVQVSAS 171
           +  G YHT  ++ S     +  G+   G+LGHG + +  V   R++ P    HV  +S  
Sbjct: 368 VACGEYHTCAVTLSGDLYTWGDGTFKFGLLGHGNDVSHWVP-KRVDGPLEGIHVSSISCG 426

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
             H A V  +GQ+FT GD S    GH D    +  PR VE+LKG+   +   G+  T  +
Sbjct: 427 PWHTALVTSAGQLFTFGDGSFGVLGHGD-RASLSVPREVESLKGLRTVRAACGVWHTAAV 485

Query: 232 T------------IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPS 279
                          G + T G    G+LGHGD   R  P  +A L E  +  Q+A G  
Sbjct: 486 VEVMVGNSSSSNCSSGKIFTWGDGDKGRLGHGDKDSRFVPTCVAALVEP-NFCQVACGHC 544

Query: 280 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 339
             +A+T +G VY+ GS     LG+  Q D L P  ++    K   V  +S G  HV  L 
Sbjct: 545 LTVALTTSGHVYTMGSAVYGQLGN-PQADGLLPVRVEGKLHKNF-VEEISCGAYHVAVLT 602

Query: 340 SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
           S   VYTWGKG  G LGHG   DK  P  + +LK
Sbjct: 603 SRTEVYTWGKGANGRLGHGGTDDKNTPTLVEALK 636



 Score = 92.8 bits (229), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 77/279 (27%), Positives = 128/279 (45%), Gaps = 19/279 (6%)

Query: 207 PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 266
           P+ +E    +  + ++ G      +T +G +++ G  + G+LGHG   D   PK I  L 
Sbjct: 302 PKPLEFAVRLDVQNISCGGRHAALVTKQGEIYSWGEESGGRLGHGVDCDVAQPKLIDSLA 361

Query: 267 EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS-NF-CLGHGEQHDELQPRAIQTFRRKGIH 324
            + ++  +A G  +  AVT +G +Y++G G+  F  LGHG       P+ +     +GIH
Sbjct: 362 HM-NIELVACGEYHTCAVTLSGDLYTWGDGTFKFGLLGHGNDVSHWVPKRVDG-PLEGIH 419

Query: 325 VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARK 384
           V  +S G  H   + S+G ++T+G G  G LGHGD    ++P  + SLK    V+     
Sbjct: 420 VSSISCGPWHTALVTSAGQLFTFGDGSFGVLGHGDRASLSVPREVESLKGLRTVRAACGV 479

Query: 385 RKTFVLVDT------------GSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHV 432
             T  +V+             G ++ +G    G LG  D+   D    P  + +L   + 
Sbjct: 480 WHTAAVVEVMVGNSSSSNCSSGKIFTWGDGDKGRLGHGDK---DSRFVPTCVAALVEPNF 536

Query: 433 SQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCL 471
            Q++ G   TV +T  G ++  G     QLG+    G L
Sbjct: 537 CQVACGHCLTVALTTSGHVYTMGSAVYGQLGNPQADGLL 575



 Score = 88.6 bits (218), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 67/222 (30%), Positives = 105/222 (47%), Gaps = 26/222 (11%)

Query: 271 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 330
           V  I+ G  +   VT  G +YS+G  S   LGHG   D  QP+ I +     I +V  + 
Sbjct: 313 VQNISCGGRHAALVTKQGEIYSWGEESGGRLGHGVDCDVAQPKLIDSLAHMNIELV--AC 370

Query: 331 GDEHVVALDSSGYVYTWGKG--YCGALGHGDEIDKTLPE----PLSSLKSHLAVQVCARK 384
           G+ H  A+  SG +YTWG G    G LGHG+++   +P+    PL  +  H++   C   
Sbjct: 371 GEYHTCAVTLSGDLYTWGDGTFKFGLLGHGNDVSHWVPKRVDGPLEGI--HVSSISCG-P 427

Query: 385 RKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV 444
             T ++   G ++ FG   FG LG  DR     +  PR ++SL+     + + G++HT  
Sbjct: 428 WHTALVTSAGQLFTFGDGSFGVLGHGDRA---SLSVPREVESLKGLRTVRAACGVWHTAA 484

Query: 445 VTD------------RGRLFGFGDNERAQLGHDTLRGCLEPT 474
           V +             G++F +GD ++ +LGH        PT
Sbjct: 485 VVEVMVGNSSSSNCSSGKIFTWGDGDKGRLGHGDKDSRFVPT 526



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 68/229 (29%), Positives = 103/229 (44%), Gaps = 26/229 (11%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           I+ G +HT L++++  +F+ G    GVLGHG   +  V    +        V+ +    H
Sbjct: 423 ISCGPWHTALVTSAGQLFTFGDGSFGVLGHGDRASLSVP-REVESLKGLRTVRAACGVWH 481

Query: 175 AAFVLQ------------SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 222
            A V++            SG++FT GD      GH D +   F P  V AL      QV 
Sbjct: 482 TAAVVEVMVGNSSSSNCSSGKIFTWGDGDKGRLGHGDKDS-RFVPTCVAALVEPNFCQVA 540

Query: 223 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS-----VVQIAAG 277
            G   T  LT  GHV+T GS  +GQLG+      P    + P+   G      V +I+ G
Sbjct: 541 CGHCLTVALTTSGHVYTMGSAVYGQLGN------PQADGLLPVRVEGKLHKNFVEEISCG 594

Query: 278 PSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVV 326
             ++  +T    VY++G G+N  LGHG   D+  P  ++  + K +  V
Sbjct: 595 AYHVAVLTSRTEVYTWGKGANGRLGHGGTDDKNTPTLVEALKDKQVRSV 643



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 58/174 (33%), Positives = 87/174 (50%), Gaps = 8/174 (4%)

Query: 306 QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTL 365
           + D L P+ ++   R  + V  +S G  H   +   G +Y+WG+   G LGHG + D   
Sbjct: 296 KMDYLVPKPLEFAVR--LDVQNISCGGRHAALVTKQGEIYSWGEESGGRLGHGVDCDVAQ 353

Query: 366 PEPLSSLKSHLAVQVCA-RKRKTFVLVDTGSVY--GFGWMGFGSLGFPDRGVSDKVLRPR 422
           P+ + SL +H+ +++ A  +  T  +  +G +Y  G G   FG LG  +  VS  V + R
Sbjct: 354 PKLIDSL-AHMNIELVACGEYHTCAVTLSGDLYTWGDGTFKFGLLGHGN-DVSHWVPK-R 410

Query: 423 ILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 476
           +   L   HVS IS G +HT +VT  G+LF FGD     LGH        P E+
Sbjct: 411 VDGPLEGIHVSSISCGPWHTALVTSAGQLFTFGDGSFGVLGHGDRASLSVPREV 464


>gi|168035990|ref|XP_001770491.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162678199|gb|EDQ64660.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 1102

 Score =  137 bits (345), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 103/316 (32%), Positives = 154/316 (48%), Gaps = 24/316 (7%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V  V+    HAA V + G+VFT G+ S    GH   +  +  P+LVEAL     + V  G
Sbjct: 311 VQYVACGGKHAALVTKQGEVFTWGEESGGRLGH-GVDCDVSHPQLVEALASSTTEVVACG 369

Query: 225 LNFTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSI-APLEEVGSVVQIAAGPSYM 281
                 +T+ G ++T G  TH  G LGHG+ +    PK +  PLEEV  V  IA GP + 
Sbjct: 370 EYHGCAVTLSGDLYTWGDGTHSLGLLGHGNDISHWIPKRVNGPLEEV-RVASIACGPWHT 428

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL--- 338
             VT  G +++FG G+   LGH ++     PR +++   KG+  VR + G  H  A+   
Sbjct: 429 AVVTTAGQLFTFGDGTFGVLGHNDRQSAYSPREVESL--KGLRTVRAACGVWHTAAVVEV 486

Query: 339 ---------DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFV 389
                     SSG ++TWG G  G LGHGD+  + +P  +++L  H   +V      T  
Sbjct: 487 MVGSSSASSCSSGKLFTWGDGDKGRLGHGDKEQRLVPTCVAALVDHNFRKVACGHSLTVA 546

Query: 390 LVDTGSVYGFGWMGFGSLGFPD-RGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDR 448
           L   G V+  G   FG LG P   G    ++  R++D+    +V  I+ G +H   VT +
Sbjct: 547 LTTKGEVFTMGSSMFGQLGDPQADGKLPGMVEGRLVDA----YVEDIACGAHHVACVTLK 602

Query: 449 GRLFGFGDNERAQLGH 464
             ++ +G     +LGH
Sbjct: 603 SEVYTWGKGANGRLGH 618



 Score =  104 bits (260), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 84/274 (30%), Positives = 127/274 (46%), Gaps = 21/274 (7%)

Query: 116 ITTGRYHTLLISNSS---VFSCGSSLCGVLGHGPETTQCVSFTRINFP-SAAHVVQVSAS 171
           +  G YH   ++ S     +  G+   G+LGHG + +  +   R+N P     V  ++  
Sbjct: 366 VACGEYHGCAVTLSGDLYTWGDGTHSLGLLGHGNDISHWIP-KRVNGPLEEVRVASIACG 424

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
             H A V  +GQ+FT GD +    GH D  +  + PR VE+LKG+   +   G+  T  +
Sbjct: 425 PWHTAVVTTAGQLFTFGDGTFGVLGHND-RQSAYSPREVESLKGLRTVRAACGVWHTAAV 483

Query: 232 T------------IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPS 279
                          G + T G    G+LGHGD   R  P  +A L +  +  ++A G S
Sbjct: 484 VEVMVGSSSASSCSSGKLFTWGDGDKGRLGHGDKEQRLVPTCVAALVD-HNFRKVACGHS 542

Query: 280 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 339
             +A+T  G V++ GS     LG   Q D   P  ++  R    +V  ++ G  HV  + 
Sbjct: 543 LTVALTTKGEVFTMGSSMFGQLGD-PQADGKLPGMVEG-RLVDAYVEDIACGAHHVACVT 600

Query: 340 SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
               VYTWGKG  G LGHGD+ D+  P  + +LK
Sbjct: 601 LKSEVYTWGKGANGRLGHGDQEDRNTPTLVEALK 634



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 71/237 (29%), Positives = 109/237 (45%), Gaps = 21/237 (8%)

Query: 253 TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQP 312
            LD P PK++     V  V  +A G  +   VT  G V+++G  S   LGHG   D   P
Sbjct: 294 NLDAPLPKALESAI-VLDVQYVACGGKHAALVTKQGEVFTWGEESGGRLGHGVDCDVSHP 352

Query: 313 RAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY--CGALGHGDEIDKTLPEPLS 370
           + ++        VV  + G+ H  A+  SG +YTWG G    G LGHG++I   +P+ ++
Sbjct: 353 QLVEALASSTTEVV--ACGEYHGCAVTLSGDLYTWGDGTHSLGLLGHGNDISHWIPKRVN 410

Query: 371 -SLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRA 429
             L+      +      T V+   G ++ FG   FG LG  DR        PR ++SL+ 
Sbjct: 411 GPLEEVRVASIACGPWHTAVVTTAGQLFTFGDGTFGVLGHNDR---QSAYSPREVESLKG 467

Query: 430 HHVSQISTGLYHTVVVTD------------RGRLFGFGDNERAQLGHDTLRGCLEPT 474
               + + G++HT  V +             G+LF +GD ++ +LGH      L PT
Sbjct: 468 LRTVRAACGVWHTAAVVEVMVGSSSASSCSSGKLFTWGDGDKGRLGHGDKEQRLVPT 524



 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 73/279 (26%), Positives = 125/279 (44%), Gaps = 19/279 (6%)

Query: 207 PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 266
           P+ +E+   +  + V  G      +T +G V T G  + G+LGHG   D   P+ +  L 
Sbjct: 300 PKALESAIVLDVQYVACGGKHAALVTKQGEVFTWGEESGGRLGHGVDCDVSHPQLVEALA 359

Query: 267 EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNF--CLGHGEQHDELQPRAIQTFRRKGIH 324
              + V +A G  +  AVT +G +Y++G G++    LGHG       P+ +     + + 
Sbjct: 360 SSTTEV-VACGEYHGCAVTLSGDLYTWGDGTHSLGLLGHGNDISHWIPKRVNGPLEE-VR 417

Query: 325 VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARK 384
           V  ++ G  H   + ++G ++T+G G  G LGH D      P  + SLK    V+     
Sbjct: 418 VASIACGPWHTAVVTTAGQLFTFGDGTFGVLGHNDRQSAYSPREVESLKGLRTVRAACGV 477

Query: 385 RKTFVLVDT------------GSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHV 432
             T  +V+             G ++ +G    G LG  D+   ++ L P  + +L  H+ 
Sbjct: 478 WHTAAVVEVMVGSSSASSCSSGKLFTWGDGDKGRLGHGDK---EQRLVPTCVAALVDHNF 534

Query: 433 SQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCL 471
            +++ G   TV +T +G +F  G +   QLG     G L
Sbjct: 535 RKVACGHSLTVALTTKGEVFTMGSSMFGQLGDPQADGKL 573



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 65/228 (28%), Positives = 99/228 (43%), Gaps = 16/228 (7%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           I  G +HT +++ +  +F+ G    GVLGH  +     S   +        V+ +    H
Sbjct: 421 IACGPWHTAVVTTAGQLFTFGDGTFGVLGHN-DRQSAYSPREVESLKGLRTVRAACGVWH 479

Query: 175 AAFVLQ------------SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 222
            A V++            SG++FT GD      GH D  + +  P  V AL     ++V 
Sbjct: 480 TAAVVEVMVGSSSASSCSSGKLFTWGDGDKGRLGHGDKEQRLV-PTCVAALVDHNFRKVA 538

Query: 223 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 282
            G + T  LT +G V T GS+  GQLG     D   P  +        V  IA G  ++ 
Sbjct: 539 CGHSLTVALTTKGEVFTMGSSMFGQLGDPQA-DGKLPGMVEGRLVDAYVEDIACGAHHVA 597

Query: 283 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 330
            VT    VY++G G+N  LGHG+Q D   P  ++  + K +  +   A
Sbjct: 598 CVTLKSEVYTWGKGANGRLGHGDQEDRNTPTLVEALKEKQVKSIACGA 645



 Score = 68.2 bits (165), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 49/155 (31%), Positives = 73/155 (47%), Gaps = 2/155 (1%)

Query: 323 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCA 382
           + V  V+ G +H   +   G V+TWG+   G LGHG + D + P+ + +L S     V  
Sbjct: 309 LDVQYVACGGKHAALVTKQGEVFTWGEESGGRLGHGVDCDVSHPQLVEALASSTTEVVAC 368

Query: 383 RKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRP-RILDSLRAHHVSQISTGLYH 441
            +     +  +G +Y +G  G  SLG    G       P R+   L    V+ I+ G +H
Sbjct: 369 GEYHGCAVTLSGDLYTWG-DGTHSLGLLGHGNDISHWIPKRVNGPLEEVRVASIACGPWH 427

Query: 442 TVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 476
           T VVT  G+LF FGD     LGH+  +    P E+
Sbjct: 428 TAVVTTAGQLFTFGDGTFGVLGHNDRQSAYSPREV 462


>gi|156372872|ref|XP_001629259.1| predicted protein [Nematostella vectensis]
 gi|156216255|gb|EDO37196.1| predicted protein [Nematostella vectensis]
          Length = 4220

 Score =  137 bits (345), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 88/311 (28%), Positives = 153/311 (49%), Gaps = 6/311 (1%)

Query: 158  NFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVP 217
             F  A  V Q++        V   G+VF CG++++   G    +  +  PR +E L    
Sbjct: 2449 EFIGALKVQQIAGGSKTLFAVSHDGKVFACGESTNGRLGLGPLSANVTVPRQIENLSSFM 2508

Query: 218  CKQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA 275
             ++V+  +G      LTI G + + G    G+LGHG+ ++   PK I   +    V  ++
Sbjct: 2509 VRKVSVHSGGRHAMALTIEGKLFSWGEGEDGKLGHGNRMNCDHPKLIDTFKS-SCVRDMS 2567

Query: 276  AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHV 335
             G S+  A+  +G +Y++G G    LGHG+ +  L+P+ +Q+F    +  +   + D   
Sbjct: 2568 CGSSHSAAILSSGELYTWGLGEYGRLGHGDNYTHLKPKKVQSFTSHRVIDIACGSRDAQT 2627

Query: 336  VALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGS 395
            +AL   G V++WG G  G LG G     ++P P+  L+     +V    + +  L  +G 
Sbjct: 2628 LALTDDGTVWSWGDGDFGKLGRGGSEGCSVPNPVEKLQGQGVCKVACGAQFSLALSTSGL 2687

Query: 396  VYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFG 455
            V+ +G   +  LG    G    V +P+I+D LR   +  ++ G  H + VTD G++F +G
Sbjct: 2688 VWTWGKGDYYRLG---HGNDTHVRKPQIVDGLRGKKIVDVAVGALHCLAVTDSGQVFAWG 2744

Query: 456  DNERAQLGHDT 466
            DN+  Q G++T
Sbjct: 2745 DNDHGQQGNNT 2755



 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 82/268 (30%), Positives = 131/268 (48%), Gaps = 6/268 (2%)

Query: 208  RLVEALKGVPCKQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL 265
            +++E+L+ V  ++V   +G      L+  G V++ G    G+LGHG+      P+ I  L
Sbjct: 3431 KMLESLQHVVVRKVAVHSGGKHAMALSADGDVYSWGEGDDGKLGHGNRNSCDRPRVIEAL 3490

Query: 266  EEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHV 325
               G V+ I+ G S+   +T N  +Y++G G    LGHG+  D+L P+ ++  R   +  
Sbjct: 3491 RGKG-VIDISCGGSHSACITQNHELYTWGKGRYGRLGHGDSEDQLLPKVVEALRGNRVID 3549

Query: 326  VRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKR 385
            V   +GD   + L     V++WG G  G LG G      +P  + SL      +V    +
Sbjct: 3550 VACGSGDAQTLCLTDDDCVWSWGDGDYGKLGRGGSDGCKIPMKVESLIGLGVSKVECGSQ 3609

Query: 386  KTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVV 445
             +  L  +G+VY +G   +  LG    GV D V RP+ + +L+   V  I+TG  H V  
Sbjct: 3610 FSVALTRSGAVYTWGKGDYYRLG---HGVDDHVRRPKRVAALQGKKVITIATGSLHCVAS 3666

Query: 446  TDRGRLFGFGDNERAQLGHDTLRGCLEP 473
            TD G ++ +GDN+  QLG  T      P
Sbjct: 3667 TDTGEVYTWGDNDEGQLGDGTTNAIARP 3694



 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 84/280 (30%), Positives = 140/280 (50%), Gaps = 9/280 (3%)

Query: 166  VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 225
            V V +   HA  +   G V++ G+      GH + N    RPR++EAL+G     ++ G 
Sbjct: 3444 VAVHSGGKHAMALSADGDVYSWGEGDDGKLGHGNRNS-CDRPRVIEALRGKGVIDISCGG 3502

Query: 226  NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA--AGPSYMLA 283
            + +  +T    ++T G   +G+LGHGD+ D+  PK +  L     V+ +A  +G +  L 
Sbjct: 3503 SHSACITQNHELYTWGKGRYGRLGHGDSEDQLLPKVVEALRG-NRVIDVACGSGDAQTLC 3561

Query: 284  VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 343
            +T +  V+S+G G    LG G       P  +++    G+ V +V  G +  VAL  SG 
Sbjct: 3562 LTDDDCVWSWGDGDYGKLGRGGSDGCKIPMKVESL--IGLGVSKVECGSQFSVALTRSGA 3619

Query: 344  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 403
            VYTWGKG    LGHG +     P+ +++L+    + +           DTG VY +G   
Sbjct: 3620 VYTWGKGDYYRLGHGVDDHVRRPKRVAALQGKKVITIATGSLHCVASTDTGEVYTWGDND 3679

Query: 404  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV 443
             G LG    G ++ + RPR++ +L+   +S+++ G  HT+
Sbjct: 3680 EGQLG---DGTTNAIARPRLVTALQGKKISRVACGSAHTI 3716



 Score =  119 bits (298), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 84/255 (32%), Positives = 129/255 (50%), Gaps = 9/255 (3%)

Query: 222 TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 281
           T G +F   LT  G V++ GS   G+LGHGDT  R  P  +  L     V++I+ G ++ 
Sbjct: 24  TDGKHFLA-LTREGEVYSWGSGDGGKLGHGDTSPREEPTLVTGLAG-KQVIRISCGSTHS 81

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS--AGDEHVVALD 339
            AVT  G +Y++G G+   LGHG   D+L P  +   R  G H++ V+  +GD H +A  
Sbjct: 82  AAVTSEGELYTWGRGNYGRLGHGSSEDQLVPVLVSGLR--GHHIIDVACGSGDAHTLAAA 139

Query: 340 SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGF 399
             G V++WG G  G LG G       P+ +  L+     +V    + +  L   GSV+ +
Sbjct: 140 DDGTVWSWGDGDYGKLGRGGSDGCKNPKSIERLQGLGVCKVYCGAQFSLALTRDGSVWTW 199

Query: 400 GWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNER 459
           G      LG    G  D V  P+++++L   HV  +S G  H + +TD G ++ +G N++
Sbjct: 200 GKGEGFRLG---HGTEDHVRHPKLVEALDGKHVVDVSVGSIHCLALTDAGEVYCWGRNDQ 256

Query: 460 AQLGHDTLRGCLEPT 474
            QLG    +   EPT
Sbjct: 257 GQLGDIDCQIRPEPT 271



 Score =  115 bits (288), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 91/334 (27%), Positives = 155/334 (46%), Gaps = 12/334 (3%)

Query: 115  QITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE- 172
            QI  G      +S +  VF+CG S  G LG GP +       +I   S+  V +VS    
Sbjct: 2458 QIAGGSKTLFAVSHDGKVFACGESTNGRLGLGPLSANVTVPRQIENLSSFMVRKVSVHSG 2517

Query: 173  -NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
              HA  +   G++F+ G+      GH +       P+L++  K    + ++ G + +  +
Sbjct: 2518 GRHAMALTIEGKLFSWGEGEDGKLGHGNRMN-CDHPKLIDTFKSSCVRDMSCGSSHSAAI 2576

Query: 232  TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGP--SYMLAVTGNGV 289
               G ++T G   +G+LGHGD      PK +        V+ IA G   +  LA+T +G 
Sbjct: 2577 LSSGELYTWGLGEYGRLGHGDNYTHLKPKKVQSFTS-HRVIDIACGSRDAQTLALTDDGT 2635

Query: 290  VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 349
            V+S+G G    LG G       P  ++  + +G  V +V+ G +  +AL +SG V+TWGK
Sbjct: 2636 VWSWGDGDFGKLGRGGSEGCSVPNPVEKLQGQG--VCKVACGAQFSLALSTSGLVWTWGK 2693

Query: 350  GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGF 409
            G    LGHG++     P+ +  L+    V V         + D+G V+ +G    G  G 
Sbjct: 2694 GDYYRLGHGNDTHVRKPQIVDGLRGKKIVDVAVGALHCLAVTDSGQVFAWGDNDHGQQGN 2753

Query: 410  PDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV 443
                V+    RP++++ L    +++++ G  H++
Sbjct: 2754 NTTTVNR---RPQLVNGLEGQKITRVACGSSHSI 2784



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 92/288 (31%), Positives = 135/288 (46%), Gaps = 20/288 (6%)

Query: 117 TTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
           T G++   L     V+S GS   G LGHG +T+     T +   +   V+++S    H+A
Sbjct: 24  TDGKHFLALTREGEVYSWGSGDGGKLGHG-DTSPREEPTLVTGLAGKQVIRISCGSTHSA 82

Query: 177 FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI--R 234
            V   G+++T G  +    GH  +   +  P LV  L+G     V  G      L     
Sbjct: 83  AVTSEGELYTWGRGNYGRLGHGSSEDQLV-PVLVSGLRGHHIIDVACGSGDAHTLAAADD 141

Query: 235 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 294
           G V + G   +G+LG G +     PKSI  L+ +G V ++  G  + LA+T +G V+++G
Sbjct: 142 GTVWSWGDGDYGKLGRGGSDGCKNPKSIERLQGLG-VCKVYCGAQFSLALTRDGSVWTWG 200

Query: 295 SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGA 354
            G  F LGHG +     P+ ++     G HVV VS G  H +AL  +G VY WG+   G 
Sbjct: 201 KGEGFRLGHGTEDHVRHPKLVEAL--DGKHVVDVSVGSIHCLALTDAGEVYCWGRNDQGQ 258

Query: 355 LGHGDEID-KTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGW 401
           LG   +ID +  PEP  +L S LA        K  V +  G    F W
Sbjct: 259 LG---DIDCQIRPEP--TLVSGLA-------SKGIVGIACGPAQSFAW 294



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 77/267 (28%), Positives = 129/267 (48%), Gaps = 12/267 (4%)

Query: 94   LRFLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVS 153
            ++ L+S++H   +V   A +   + G++   L ++  V+S G    G LGHG   + C  
Sbjct: 3430 IKMLESLQHV--VVRKVAVH---SGGKHAMALSADGDVYSWGEGDDGKLGHGNRNS-CDR 3483

Query: 154  FTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEAL 213
               I       V+ +S   +H+A + Q+ +++T G       GH D+   +  P++VEAL
Sbjct: 3484 PRVIEALRGKGVIDISCGGSHSACITQNHELYTWGKGRYGRLGHGDSEDQLL-PKVVEAL 3542

Query: 214  KGVPCKQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSV 271
            +G     V   +G   T  LT    V + G   +G+LG G +     P  +  L  +G V
Sbjct: 3543 RGNRVIDVACGSGDAQTLCLTDDDCVWSWGDGDYGKLGRGGSDGCKIPMKVESLIGLG-V 3601

Query: 272  VQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG 331
             ++  G  + +A+T +G VY++G G  + LGHG      +P+ +     +G  V+ ++ G
Sbjct: 3602 SKVECGSQFSVALTRSGAVYTWGKGDYYRLGHGVDDHVRRPKRVAAL--QGKKVITIATG 3659

Query: 332  DEHVVALDSSGYVYTWGKGYCGALGHG 358
              H VA   +G VYTWG    G LG G
Sbjct: 3660 SLHCVASTDTGEVYTWGDNDEGQLGDG 3686



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 60/209 (28%), Positives = 102/209 (48%), Gaps = 6/209 (2%)

Query: 271  VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQ-PRAIQTFRRKGIHVVRVS 329
            V QIA G   + AV+ +G V++ G  +N  LG G     +  PR I+      +  V V 
Sbjct: 2456 VQQIAGGSKTLFAVSHDGKVFACGESTNGRLGLGPLSANVTVPRQIENLSSFMVRKVSVH 2515

Query: 330  AGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFV 389
            +G  H +AL   G +++WG+G  G LGHG+ ++   P+ + + KS     +      +  
Sbjct: 2516 SGGRHAMALTIEGKLFSWGEGEDGKLGHGNRMNCDHPKLIDTFKSSCVRDMSCGSSHSAA 2575

Query: 390  LVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLY--HTVVVTD 447
            ++ +G +Y +G   +G LG  D       L+P+ + S  +H V  I+ G     T+ +TD
Sbjct: 2576 ILSSGELYTWGLGEYGRLGHGDNYTH---LKPKKVQSFTSHRVIDIACGSRDAQTLALTD 2632

Query: 448  RGRLFGFGDNERAQLGHDTLRGCLEPTEI 476
             G ++ +GD +  +LG     GC  P  +
Sbjct: 2633 DGTVWSWGDGDFGKLGRGGSEGCSVPNPV 2661



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 67/244 (27%), Positives = 117/244 (47%), Gaps = 6/244 (2%)

Query: 235  GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 294
            G ++  G N  GQLG  +      P++I  L  +   VQI  G   + AVT  G VY+ G
Sbjct: 3354 GTIYGWGHNHRGQLGSLEGAKVKLPQTIEALASI-RPVQIVGGEQTLFAVTAEGKVYATG 3412

Query: 295  SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGA 354
             G    LG G        + +++ +   +  V V +G +H +AL + G VY+WG+G  G 
Sbjct: 3413 YGHGGRLGLGGTDTVTSIKMLESLQHVVVRKVAVHSGGKHAMALSADGDVYSWGEGDDGK 3472

Query: 355  LGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGV 414
            LGHG+      P  + +L+    + +      +  +     +Y +G   +G LG    G 
Sbjct: 3473 LGHGNRNSCDRPRVIEALRGKGVIDISCGGSHSACITQNHELYTWGKGRYGRLG---HGD 3529

Query: 415  SDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLE 472
            S+  L P+++++LR + V  ++  +G   T+ +TD   ++ +GD +  +LG     GC  
Sbjct: 3530 SEDQLLPKVVEALRGNRVIDVACGSGDAQTLCLTDDDCVWSWGDGDYGKLGRGGSDGCKI 3589

Query: 473  PTEI 476
            P ++
Sbjct: 3590 PMKV 3593



 Score = 77.8 bits (190), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 50/168 (29%), Positives = 80/168 (47%), Gaps = 6/168 (3%)

Query: 312 PRAIQTFRRKGIHVVRVSAGD-EHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLS 370
           P  ++   RK   V  V+  D +H +AL   G VY+WG G  G LGHGD   +  P  ++
Sbjct: 5   PAELECLSRKCEIVQVVTHTDGKHFLALTREGEVYSWGSGDGGKLGHGDTSPREEPTLVT 64

Query: 371 SLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAH 430
            L     +++      +  +   G +Y +G   +G LG    G S+  L P ++  LR H
Sbjct: 65  GLAGKQVIRISCGSTHSAAVTSEGELYTWGRGNYGRLG---HGSSEDQLVPVLVSGLRGH 121

Query: 431 HVSQIS--TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 476
           H+  ++  +G  HT+   D G ++ +GD +  +LG     GC  P  I
Sbjct: 122 HIIDVACGSGDAHTLAAADDGTVWSWGDGDYGKLGRGGSDGCKNPKSI 169



 Score = 64.3 bits (155), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 59/185 (31%), Positives = 83/185 (44%), Gaps = 5/185 (2%)

Query: 118 TGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
           +G  HTL  ++  +V+S G    G LG G  +  C +   I       V +V      + 
Sbjct: 130 SGDAHTLAAADDGTVWSWGDGDYGKLGRG-GSDGCKNPKSIERLQGLGVCKVYCGAQFSL 188

Query: 177 FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
            + + G V+T G    F  GH  T   +  P+LVEAL G     V+ G      LT  G 
Sbjct: 189 ALTRDGSVWTWGKGEGFRLGH-GTEDHVRHPKLVEALDGKHVVDVSVGSIHCLALTDAGE 247

Query: 237 VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 296
           V+  G N  GQLG  D   RP P  ++ L   G +V IA GP+   A +  G  +S G+ 
Sbjct: 248 VYCWGRNDQGQLGDIDCQIRPEPTLVSGLASKG-IVGIACGPAQSFAWSCAG-QWSVGTR 305

Query: 297 SNFCL 301
             FC+
Sbjct: 306 LQFCV 310



 Score = 51.6 bits (122), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 39/158 (24%), Positives = 73/158 (46%), Gaps = 6/158 (3%)

Query: 322  GIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGD-EIDKTLPEPLSSLKSHLAVQV 380
             + V +++ G + + A+   G V+  G+   G LG G    + T+P  + +L S +  +V
Sbjct: 2453 ALKVQQIAGGSKTLFAVSHDGKVFACGESTNGRLGLGPLSANVTVPRQIENLSSFMVRKV 2512

Query: 381  CARK--RKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTG 438
                  R    L   G ++ +G    G LG  +R   D    P+++D+ ++  V  +S G
Sbjct: 2513 SVHSGGRHAMALTIEGKLFSWGEGEDGKLGHGNRMNCD---HPKLIDTFKSSCVRDMSCG 2569

Query: 439  LYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 476
              H+  +   G L+ +G  E  +LGH      L+P ++
Sbjct: 2570 SSHSAAILSSGELYTWGLGEYGRLGHGDNYTHLKPKKV 2607



 Score = 48.5 bits (114), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 50/183 (27%), Positives = 78/183 (42%), Gaps = 8/183 (4%)

Query: 106  IVETSAGNMQIT----TGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFP 160
            +VE   GN  I     +G   TL L  +  V+S G    G LG G  +  C    ++   
Sbjct: 3538 VVEALRGNRVIDVACGSGDAQTLCLTDDDCVWSWGDGDYGKLGRG-GSDGCKIPMKVESL 3596

Query: 161  SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQ 220
                V +V      +  + +SG V+T G    +  GH   +  + RP+ V AL+G     
Sbjct: 3597 IGLGVSKVECGSQFSVALTRSGAVYTWGKGDYYRLGH-GVDDHVRRPKRVAALQGKKVIT 3655

Query: 221  VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 280
            +  G       T  G V+T G N  GQLG G T     P+ +  L+    + ++A G ++
Sbjct: 3656 IATGSLHCVASTDTGEVYTWGDNDEGQLGDGTTNAIARPRLVTALQG-KKISRVACGSAH 3714

Query: 281  MLA 283
             +A
Sbjct: 3715 TIA 3717



 Score = 47.8 bits (112), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 38/138 (27%), Positives = 67/138 (48%), Gaps = 5/138 (3%)

Query: 341  SGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 400
            SG +Y WG  + G LG  +     LP+ + +L S   VQ+   ++  F +   G VY   
Sbjct: 3353 SGTIYGWGHNHRGQLGSLEGAKVKLPQTIEALASIRPVQIVGGEQTLFAVTAEGKVYA-- 3410

Query: 401  WMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDNE 458
              G+G  G    G +D V   ++L+SL+   V +++  +G  H + ++  G ++ +G+ +
Sbjct: 3411 -TGYGHGGRLGLGGTDTVTSIKMLESLQHVVVRKVAVHSGGKHAMALSADGDVYSWGEGD 3469

Query: 459  RAQLGHDTLRGCLEPTEI 476
              +LGH     C  P  I
Sbjct: 3470 DGKLGHGNRNSCDRPRVI 3487



 Score = 45.1 bits (105), Expect = 0.088,   Method: Compositional matrix adjust.
 Identities = 43/160 (26%), Positives = 70/160 (43%), Gaps = 5/160 (3%)

Query: 125  LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQV 184
            L  + +V+S G    G LG G  +  C     +       V +V+     +  +  SG V
Sbjct: 2630 LTDDGTVWSWGDGDFGKLGRG-GSEGCSVPNPVEKLQGQGVCKVACGAQFSLALSTSGLV 2688

Query: 185  FTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 243
            +T G    +  GH  DT+  + +P++V+ L+G     V  G      +T  G V   G N
Sbjct: 2689 WTWGKGDYYRLGHGNDTH--VRKPQIVDGLRGKKIVDVAVGALHCLAVTDSGQVFAWGDN 2746

Query: 244  THGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
             HGQ G+  T     P+ +  LE    + ++A G S+ +A
Sbjct: 2747 DHGQQGNNTTTVNRRPQLVNGLEG-QKITRVACGSSHSIA 2785


>gi|350405799|ref|XP_003487554.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Bombus impatiens]
          Length = 5118

 Score =  137 bits (345), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 96/316 (30%), Positives = 155/316 (49%), Gaps = 9/316 (2%)

Query: 161  SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQ 220
            SA   VQ++  E     V   G+V+  G  ++   G   T+  +  P L+E+++ V  K+
Sbjct: 4290 SALRPVQLTGGEQTLLAVTADGKVYATGYGAAGRLGIGGTDS-VMVPTLLESIQHVFVKK 4348

Query: 221  V--TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS-VVQIAAG 277
            V   +G      L+  GHV++ G    G+LGHG+ L    PK I  L  +G+ +V IA G
Sbjct: 4349 VAVNSGGKHCLALSSEGHVYSWGEGDDGKLGHGNRLMYDRPKLIEEL--LGTEIVDIACG 4406

Query: 278  PSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
              +  A+T  G +Y++G G    LGHG+  D+L P+ ++  +   +  V   +GD   + 
Sbjct: 4407 GHHSAAITSAGWLYTWGKGRYGRLGHGDSEDQLTPKLVEALQDYKVIDVACGSGDAQTLC 4466

Query: 338  LDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVY 397
            +     V++WG G  G LG G      +P  + SL     ++V    + +  L  +G++Y
Sbjct: 4467 VTDDDNVWSWGDGDYGKLGRGGSDGCKIPMKIESLAGLGVIKVECGSQFSVALTRSGAIY 4526

Query: 398  GFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDN 457
             +G   +  LG    G  D V RPR + +L+   +  I+TG  H V  TD+G +F +GDN
Sbjct: 4527 TWGKGDYHRLG---HGTDDHVRRPRKVAALQGKKIISIATGSLHCVACTDKGEVFTWGDN 4583

Query: 458  ERAQLGHDTLRGCLEP 473
            +  QLG  T      P
Sbjct: 4584 DEGQLGDGTTSALQRP 4599



 Score =  128 bits (321), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 89/274 (32%), Positives = 135/274 (49%), Gaps = 8/274 (2%)

Query: 204  IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 263
            I  P   E L  +    +  G      ++  G ++ CG  T+G+LG GD  +   PK I 
Sbjct: 3275 IKLPVYSEVLSKLKPIHIAGGSKTLFVVSQEGKLYACGEGTNGRLGLGDDSNVCEPKLIP 3334

Query: 264  PLEE-VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKG 322
             L + +   V + +G  + LA+T +G ++S+G G +  LGHG      +PR I++ + K 
Sbjct: 3335 FLSQYMIKKVAVHSGGKHALALTQDGKIFSWGEGEDGKLGHGNSVSLDKPRLIESLKSKR 3394

Query: 323  IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVC- 381
            I    ++ G  H  A+ SSG +YTWG G  G LGHGD   +  P+ + SL     +QV  
Sbjct: 3395 IR--DIACGSGHSAAITSSGELYTWGLGEYGRLGHGDTATQMKPKLVQSLVGQRVIQVAC 3452

Query: 382  -ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLY 440
             +R  +T  L   GSVY +G   FG LG   RG SD    P ++D L    V QI  G  
Sbjct: 3453 GSRDAQTMALTADGSVYSWGDGDFGKLG---RGGSDGCYTPLLIDRLNGLGVVQIECGAQ 3509

Query: 441  HTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPT 474
             ++ +T  G ++ +G  +  +LGH       +PT
Sbjct: 3510 FSLALTKYGEVWTWGKGDYFRLGHGNDHHVRKPT 3543



 Score =  125 bits (313), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 100/325 (30%), Positives = 158/325 (48%), Gaps = 16/325 (4%)

Query: 131  VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE--NHAAFVLQSGQVFTCG 188
            +++CG    G LG G ++  C     I F S   + +V+      HA  + Q G++F+ G
Sbjct: 3308 LYACGEGTNGRLGLGDDSNVC-EPKLIPFLSQYMIKKVAVHSGGKHALALTQDGKIFSWG 3366

Query: 189  DNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQL 248
            +      GH ++   + +PRL+E+LK    + +  G   +  +T  G ++T G   +G+L
Sbjct: 3367 EGEDGKLGHGNS-VSLDKPRLIESLKSKRIRDIACGSGHSAAITSSGELYTWGLGEYGRL 3425

Query: 249  GHGDTLDRPTPKSIAPLEEVGS-VVQIAAGP--SYMLAVTGNGVVYSFGSGSNFCLGHGE 305
            GHGDT  +  PK +  L  VG  V+Q+A G   +  +A+T +G VYS+G G    LG G 
Sbjct: 3426 GHGDTATQMKPKLVQSL--VGQRVIQVACGSRDAQTMALTADGSVYSWGDGDFGKLGRGG 3483

Query: 306  QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTL 365
                  P  I   R  G+ VV++  G +  +AL   G V+TWGKG    LGHG++     
Sbjct: 3484 SDGCYTPLLID--RLNGLGVVQIECGAQFSLALTKYGEVWTWGKGDYFRLGHGNDHHVRK 3541

Query: 366  PEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILD 425
            P  +  L+    V V         + DTG VY +G    G  G     V+ K   P ++ 
Sbjct: 3542 PTLVEGLRGKKVVHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNGSTIVNKK---PSLVH 3598

Query: 426  SLRAHHVSQISTGLYHTV--VVTDR 448
             L    V+++S G  H++  V+TD+
Sbjct: 3599 ELDDARVNRVSCGSSHSIAWVLTDQ 3623



 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 96/337 (28%), Positives = 161/337 (47%), Gaps = 17/337 (5%)

Query: 114  MQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHV----VQV 168
            +Q+T G    L ++ +  V++ G    G LG G   +  V        S  HV    V V
Sbjct: 4295 VQLTGGEQTLLAVTADGKVYATGYGAAGRLGIGGTDSVMVPTL---LESIQHVFVKKVAV 4351

Query: 169  SASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIF-RPRLVEALKGVPCKQVTAGLNF 227
            ++   H   +   G V++ G+      GH   NR ++ RP+L+E L G     +  G + 
Sbjct: 4352 NSGGKHCLALSSEGHVYSWGEGDDGKLGH--GNRLMYDRPKLIEELLGTEIVDIACGGHH 4409

Query: 228  TGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSV-VQIAAGPSYMLAVTG 286
            +  +T  G ++T G   +G+LGHGD+ D+ TPK +  L++   + V   +G +  L VT 
Sbjct: 4410 SAAITSAGWLYTWGKGRYGRLGHGDSEDQLTPKLVEALQDYKVIDVACGSGDAQTLCVTD 4469

Query: 287  NGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYT 346
            +  V+S+G G    LG G       P  I++    G+ V++V  G +  VAL  SG +YT
Sbjct: 4470 DDNVWSWGDGDYGKLGRGGSDGCKIPMKIESL--AGLGVIKVECGSQFSVALTRSGAIYT 4527

Query: 347  WGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGS 406
            WGKG    LGHG +     P  +++L+    + +           D G V+ +G    G 
Sbjct: 4528 WGKGDYHRLGHGTDDHVRRPRKVAALQGKKIISIATGSLHCVACTDKGEVFTWGDNDEGQ 4587

Query: 407  LGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV 443
            LG    G +  + RPR++ +L+   +++++ G  HT+
Sbjct: 4588 LG---DGTTSALQRPRLVHALQGKKITRVACGSAHTL 4621



 Score =  120 bits (301), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 87/320 (27%), Positives = 153/320 (47%), Gaps = 17/320 (5%)

Query: 155  TRINFPSAAHV------VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPR 208
            ++I  P  + V      + ++        V Q G+++ CG+ ++   G  D +  +  P+
Sbjct: 3273 SKIKLPVYSEVLSKLKPIHIAGGSKTLFVVSQEGKLYACGEGTNGRLGLGDDSN-VCEPK 3331

Query: 209  LVEALKGVPCKQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 266
            L+  L     K+V   +G      LT  G + + G    G+LGHG+++    P+ I  L+
Sbjct: 3332 LIPFLSQYMIKKVAVHSGGKHALALTQDGKIFSWGEGEDGKLGHGNSVSLDKPRLIESLK 3391

Query: 267  EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVV 326
                +  IA G  +  A+T +G +Y++G G    LGHG+   +++P+ +Q+    G  V+
Sbjct: 3392 S-KRIRDIACGSGHSAAITSSGELYTWGLGEYGRLGHGDTATQMKPKLVQSL--VGQRVI 3448

Query: 327  RVSAG--DEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARK 384
            +V+ G  D   +AL + G VY+WG G  G LG G       P  +  L     VQ+    
Sbjct: 3449 QVACGSRDAQTMALTADGSVYSWGDGDFGKLGRGGSDGCYTPLLIDRLNGLGVVQIECGA 3508

Query: 385  RKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV 444
            + +  L   G V+ +G   +  LG    G    V +P +++ LR   V  ++ G  H + 
Sbjct: 3509 QFSLALTKYGEVWTWGKGDYFRLG---HGNDHHVRKPTLVEGLRGKKVVHVAVGALHCLA 3565

Query: 445  VTDRGRLFGFGDNERAQLGH 464
            VTD G+++ +GDN+  Q G+
Sbjct: 3566 VTDTGQVYAWGDNDHGQQGN 3585



 Score =  105 bits (262), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 83/253 (32%), Positives = 120/253 (47%), Gaps = 13/253 (5%)

Query: 119  GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTR---INFPSAAHVVQVSASENHA 175
            G++   L  +  +FS G    G LGHG      VS  +   I    +  +  ++    H+
Sbjct: 3350 GKHALALTQDGKIFSWGEGEDGKLGHG----NSVSLDKPRLIESLKSKRIRDIACGSGHS 3405

Query: 176  AFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN--FTGFLTI 233
            A +  SG+++T G       GH DT   + +P+LV++L G    QV  G     T  LT 
Sbjct: 3406 AAITSSGELYTWGLGEYGRLGHGDTATQM-KPKLVQSLVGQRVIQVACGSRDAQTMALTA 3464

Query: 234  RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
             G V++ G    G+LG G +    TP  I  L  +G VVQI  G  + LA+T  G V+++
Sbjct: 3465 DGSVYSWGDGDFGKLGRGGSDGCYTPLLIDRLNGLG-VVQIECGAQFSLALTKYGEVWTW 3523

Query: 294  GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 353
            G G  F LGHG  H   +P  ++  R  G  VV V+ G  H +A+  +G VY WG    G
Sbjct: 3524 GKGDYFRLGHGNDHHVRKPTLVEGLR--GKKVVHVAVGALHCLAVTDTGQVYAWGDNDHG 3581

Query: 354  ALGHGDEIDKTLP 366
              G+G  I    P
Sbjct: 3582 QQGNGSTIVNKKP 3594



 Score =  102 bits (253), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 73/247 (29%), Positives = 125/247 (50%), Gaps = 12/247 (4%)

Query: 235  GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
            G ++  G N  GQLG   G  +  P   +S++ L  V    Q+  G   +LAVT +G VY
Sbjct: 4259 GAIYGWGHNHRGQLGGLEGAKVKLPVLCESLSALRPV----QLTGGEQTLLAVTADGKVY 4314

Query: 292  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 351
            + G G+   LG G     + P  +++ +   +  V V++G +H +AL S G+VY+WG+G 
Sbjct: 4315 ATGYGAAGRLGIGGTDSVMVPTLLESIQHVFVKKVAVNSGGKHCLALSSEGHVYSWGEGD 4374

Query: 352  CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 411
             G LGHG+ +    P+ +  L     V +      +  +   G +Y +G   +G LG  D
Sbjct: 4375 DGKLGHGNRLMYDRPKLIEELLGTEIVDIACGGHHSAAITSAGWLYTWGKGRYGRLGHGD 4434

Query: 412  RGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG 469
               S+  L P+++++L+ + V  ++  +G   T+ VTD   ++ +GD +  +LG     G
Sbjct: 4435 ---SEDQLTPKLVEALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRGGSDG 4491

Query: 470  CLEPTEI 476
            C  P +I
Sbjct: 4492 CKIPMKI 4498



 Score = 99.8 bits (247), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 68/244 (27%), Positives = 115/244 (47%), Gaps = 10/244 (4%)

Query: 237  VHTCGSNTHGQLG--HGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 294
            V+  G N   QLG   G  +  P    +  L ++  +  IA G   +  V+  G +Y+ G
Sbjct: 3256 VYVWGLNDKDQLGGLKGSKIKLPVYSEV--LSKLKPI-HIAGGSKTLFVVSQEGKLYACG 3312

Query: 295  SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGA 354
             G+N  LG G+  +  +P+ I    +  I  V V +G +H +AL   G +++WG+G  G 
Sbjct: 3313 EGTNGRLGLGDDSNVCEPKLIPFLSQYMIKKVAVHSGGKHALALTQDGKIFSWGEGEDGK 3372

Query: 355  LGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGV 414
            LGHG+ +    P  + SLKS     +      +  +  +G +Y +G   +G LG  D   
Sbjct: 3373 LGHGNSVSLDKPRLIESLKSKRIRDIACGSGHSAAITSSGELYTWGLGEYGRLGHGDTAT 3432

Query: 415  SDKVLRPRILDSLRAHHVSQISTGLY--HTVVVTDRGRLFGFGDNERAQLGHDTLRGCLE 472
                ++P+++ SL    V Q++ G     T+ +T  G ++ +GD +  +LG     GC  
Sbjct: 3433 Q---MKPKLVQSLVGQRVIQVACGSRDAQTMALTADGSVYSWGDGDFGKLGRGGSDGCYT 3489

Query: 473  PTEI 476
            P  I
Sbjct: 3490 PLLI 3493



 Score = 92.8 bits (229), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 65/243 (26%), Positives = 115/243 (47%), Gaps = 6/243 (2%)

Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 290
           LT    V++ G+   G+LGHGD +    PK +  L +  ++  IA G +Y   ++ NG +
Sbjct: 512 LTQDSSVYSWGNGDGGRLGHGDRVWYDEPKLVEALVD-KNITFIACGSTYSAVLSSNGEL 570

Query: 291 YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKG 350
           Y++G G+   LGHG   + L P  +       +  V   +GD   + + +SG V++WG G
Sbjct: 571 YTWGRGNYGRLGHGNSDNVLIPTLVTALNGHMVVYVACGSGDSQTLCVTASGIVFSWGDG 630

Query: 351 YCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFP 410
             G LG G       P+ +  L      +V    + +  L   G VY +G      LG  
Sbjct: 631 NYGKLGRGGCDGSKTPKIVDKLLDINVAKVYCGGQFSAALTAYGEVYTWGKGEGYRLG-- 688

Query: 411 DRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGC 470
             G  + +  P++++ L+   V ++  G +H + +T+   ++G+G N+  Q+  D   G 
Sbjct: 689 -HGNEEHIRYPKVIEVLKPKKVKELCVGNFHVLALTEDQLVYGWGRNDYGQI--DPALGT 745

Query: 471 LEP 473
           + P
Sbjct: 746 IVP 748



 Score = 89.0 bits (219), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 75/272 (27%), Positives = 123/272 (45%), Gaps = 20/272 (7%)

Query: 93   VLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQC 151
            V   L+S++H           + + +G  H L +S+   V+S G    G LGHG      
Sbjct: 4334 VPTLLESIQH------VFVKKVAVNSGGKHCLALSSEGHVYSWGEGDDGKLGHGNR---- 4383

Query: 152  VSFTR---INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPR 208
            + + R   I       +V ++   +H+A +  +G ++T G       GH D+   +  P+
Sbjct: 4384 LMYDRPKLIEELLGTEIVDIACGGHHSAAITSAGWLYTWGKGRYGRLGHGDSEDQL-TPK 4442

Query: 209  LVEALKGVPCKQVTAGLNFTGFL--TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 266
            LVEAL+      V  G      L  T   +V + G   +G+LG G +     P  I  L 
Sbjct: 4443 LVEALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRGGSDGCKIPMKIESLA 4502

Query: 267  EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVV 326
             +G V+++  G  + +A+T +G +Y++G G    LGHG      +PR +     +G  ++
Sbjct: 4503 GLG-VIKVECGSQFSVALTRSGAIYTWGKGDYHRLGHGTDDHVRRPRKVAAL--QGKKII 4559

Query: 327  RVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 358
             ++ G  H VA    G V+TWG    G LG G
Sbjct: 4560 SIATGSLHCVACTDKGEVFTWGDNDEGQLGDG 4591



 Score = 88.6 bits (218), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 73/264 (27%), Positives = 124/264 (46%), Gaps = 29/264 (10%)

Query: 117 TTGRYHTLLISNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHVVQVS 169
           + G ++  L  +SSV+S G+   G LGHG       P+  + +    I F        ++
Sbjct: 504 SDGTHYLALTQDSSVYSWGNGDGGRLGHGDRVWYDEPKLVEALVDKNITF--------IA 555

Query: 170 ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG-----VPCKQVTAG 224
               ++A +  +G+++T G  +    GH +++  +  P LV AL G     V C    +G
Sbjct: 556 CGSTYSAVLSSNGELYTWGRGNYGRLGHGNSDN-VLIPTLVTALNGHMVVYVACG---SG 611

Query: 225 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 284
            + T  +T  G V + G   +G+LG G      TPK +  L ++ +V ++  G  +  A+
Sbjct: 612 DSQTLCVTASGIVFSWGDGNYGKLGRGGCDGSKTPKIVDKLLDI-NVAKVYCGGQFSAAL 670

Query: 285 TGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           T  G VY++G G  + LGHG +     P+ I+  + K   V  +  G+ HV+AL     V
Sbjct: 671 TAYGEVYTWGKGEGYRLGHGNEEHIRYPKVIEVLKPK--KVKELCVGNFHVLALTEDQLV 728

Query: 345 YTWGKGYCGALGHGDEIDKTLPEP 368
           Y WG+   G +     +   +PEP
Sbjct: 729 YGWGRNDYGQIDPA--LGTIVPEP 750


>gi|357493985|ref|XP_003617281.1| Lateral signaling target protein-like protein [Medicago truncatula]
 gi|355518616|gb|AET00240.1| Lateral signaling target protein-like protein [Medicago truncatula]
          Length = 1124

 Score =  137 bits (345), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 104/327 (31%), Positives = 157/327 (48%), Gaps = 29/327 (8%)

Query: 159 FPSAAHVVQVSASEN------HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEA 212
           FP A     V   +N      HAA V + G++F+ G+ S    GH   +  +  P+L++A
Sbjct: 322 FPKALESAVVLDVQNIACGGRHAALVTKQGEIFSWGEESGGRLGH-GVDSDVLHPKLIDA 380

Query: 213 LKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN--THGQLGHGDTLDRPTPKSI-APLEEVG 269
           L     + V  G   T  +T+ G ++T G+    +G LGHG+ +    PK +  PLE + 
Sbjct: 381 LSNTNIELVACGEYHTCAVTLSGDLYTWGNGAYNYGLLGHGNQVSHWVPKRVNGPLEGI- 439

Query: 270 SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS 329
            V  I+ GP +   VT  G +++FG G+   LGHG++     PR +++   KG+  +R S
Sbjct: 440 HVSYISCGPWHTAVVTSAGQLFTFGDGTFGALGHGDRKSVSLPREVESL--KGLRTMRAS 497

Query: 330 AGDEHVVAL------------DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLA 377
            G  H  A+             SSG ++TWG G  G LGHGD+  K +P  ++ L  H  
Sbjct: 498 CGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVA-LVEHNF 556

Query: 378 VQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIST 437
            QV      T  L  +G VY  G   +G LG P    +D  L  R+   L    V +I+ 
Sbjct: 557 CQVACGHSLTVALTTSGHVYAMGSPVYGQLGNPQ---ADGKLPTRVEGKLLKSFVEEIAC 613

Query: 438 GLYHTVVVTDRGRLFGFGDNERAQLGH 464
           G YH  V+T R  ++ +G     +LGH
Sbjct: 614 GAYHVAVLTLRNEVYTWGKGANGRLGH 640



 Score =  112 bits (279), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 95/300 (31%), Positives = 139/300 (46%), Gaps = 24/300 (8%)

Query: 100 VEHSSDIVETSAGNMQITT-GRYHTLLISNSS---VFSCGSSLCGVLGHGPETTQCVSFT 155
           V H   I   S  N+++   G YHT  ++ S     +  G+   G+LGHG + +  V   
Sbjct: 372 VLHPKLIDALSNTNIELVACGEYHTCAVTLSGDLYTWGNGAYNYGLLGHGNQVSHWVP-K 430

Query: 156 RINFP-SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALK 214
           R+N P    HV  +S    H A V  +GQ+FT GD +    GH D  + +  PR VE+LK
Sbjct: 431 RVNGPLEGIHVSYISCGPWHTAVVTSAGQLFTFGDGTFGALGHGD-RKSVSLPREVESLK 489

Query: 215 GVPCKQVTAGLNFTGFLT------------IRGHVHTCGSNTHGQLGHGDTLDRPTPKSI 262
           G+   + + G+  T  +               G + T G    G+LGHGD   +  P  +
Sbjct: 490 GLRTMRASCGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCV 549

Query: 263 APLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKG 322
           A +E   +  Q+A G S  +A+T +G VY+ GS     LG+ +   +L  R      +  
Sbjct: 550 ALVEH--NFCQVACGHSLTVALTTSGHVYAMGSPVYGQLGNPQADGKLPTRVEGKLLKS- 606

Query: 323 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK-SHLAVQVC 381
             V  ++ G  HV  L     VYTWGKG  G LGHGD  D+  P  + +LK  H+    C
Sbjct: 607 -FVEEIACGAYHVAVLTLRNEVYTWGKGANGRLGHGDTDDRNNPTLVDALKDKHVKSIAC 665



 Score = 99.0 bits (245), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 79/250 (31%), Positives = 118/250 (47%), Gaps = 27/250 (10%)

Query: 249 GHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHD 308
           G G  +D   PK++     V  V  IA G  +   VT  G ++S+G  S   LGHG   D
Sbjct: 313 GLGVKIDSLFPKALESAV-VLDVQNIACGGRHAALVTKQGEIFSWGEESGGRLGHGVDSD 371

Query: 309 ELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC--GALGHGDEIDKTLP 366
            L P+ I       I +V  + G+ H  A+  SG +YTWG G    G LGHG+++   +P
Sbjct: 372 VLHPKLIDALSNTNIELV--ACGEYHTCAVTLSGDLYTWGNGAYNYGLLGHGNQVSHWVP 429

Query: 367 E----PLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPR 422
           +    PL  +  H++   C     T V+   G ++ FG   FG+LG  DR     V  PR
Sbjct: 430 KRVNGPLEGI--HVSYISCG-PWHTAVVTSAGQLFTFGDGTFGALGHGDR---KSVSLPR 483

Query: 423 ILDSLRAHHVSQISTGLYHTVVVTD------------RGRLFGFGDNERAQLGHDTLRGC 470
            ++SL+     + S G++HT  V +             G+LF +GD ++ +LGH      
Sbjct: 484 EVESLKGLRTMRASCGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAK 543

Query: 471 LEPTEIFIQE 480
           L PT + + E
Sbjct: 544 LVPTCVALVE 553



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 84/296 (28%), Positives = 140/296 (47%), Gaps = 28/296 (9%)

Query: 207 PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 266
           P+ +E+   +  + +  G      +T +G + + G  + G+LGHG   D   PK I  L 
Sbjct: 323 PKALESAVVLDVQNIACGGRHAALVTKQGEIFSWGEESGGRLGHGVDSDVLHPKLIDALS 382

Query: 267 EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS-NF-CLGHGEQHDELQPRAIQTFRRKGIH 324
              ++  +A G  +  AVT +G +Y++G+G+ N+  LGHG Q     P+ +     +GIH
Sbjct: 383 NT-NIELVACGEYHTCAVTLSGDLYTWGNGAYNYGLLGHGNQVSHWVPKRVNG-PLEGIH 440

Query: 325 VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARK 384
           V  +S G  H   + S+G ++T+G G  GALGHGD    +LP  + SLK    ++     
Sbjct: 441 VSYISCGPWHTAVVTSAGQLFTFGDGTFGALGHGDRKSVSLPREVESLKGLRTMRASCGV 500

Query: 385 RKTFVLVDT------------GSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHV 432
             T  +V+             G ++ +G    G LG  D+   +  L P  + +L  H+ 
Sbjct: 501 WHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDK---EAKLVPTCV-ALVEHNF 556

Query: 433 SQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI-------FIQEM 481
            Q++ G   TV +T  G ++  G     QLG+    G L PT +       F++E+
Sbjct: 557 CQVACGHSLTVALTTSGHVYAMGSPVYGQLGNPQADGKL-PTRVEGKLLKSFVEEI 611



 Score = 73.2 bits (178), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 68/237 (28%), Positives = 106/237 (44%), Gaps = 21/237 (8%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSASEN 173
           I+ G +HT +++++  +F+ G    G LGHG    + VS  R +        ++ S    
Sbjct: 444 ISCGPWHTAVVTSAGQLFTFGDGTFGALGHGDR--KSVSLPREVESLKGLRTMRASCGVW 501

Query: 174 HAAFVLQ------------SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQV 221
           H A V++            SG++FT GD      GH D    +  P  V  ++   C QV
Sbjct: 502 HTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLV-PTCVALVEHNFC-QV 559

Query: 222 TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 281
             G + T  LT  GHV+  GS  +GQLG+    D   P  +        V +IA G  ++
Sbjct: 560 ACGHSLTVALTTSGHVYAMGSPVYGQLGNPQA-DGKLPTRVEGKLLKSFVEEIACGAYHV 618

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
             +T    VY++G G+N  LGHG+  D   P  +   + K  HV  ++ G     A+
Sbjct: 619 AVLTLRNEVYTWGKGANGRLGHGDTDDRNNPTLVDALKDK--HVKSIACGTNFTAAI 673



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 54/199 (27%), Positives = 86/199 (43%), Gaps = 23/199 (11%)

Query: 92  RVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQ- 150
           R +R    V H++ +VE       +  G   +   S+  +F+ G    G LGHG +  + 
Sbjct: 492 RTMRASCGVWHTAAVVE-------VMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKL 544

Query: 151 ---CVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRP 207
              CV+    NF       QV+   +    +  SG V+  G       G+   +  +  P
Sbjct: 545 VPTCVALVEHNF------CQVACGHSLTVALTTSGHVYAMGSPVYGQLGNPQADGKL--P 596

Query: 208 RLVEA--LKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL 265
             VE   LK    +++  G      LT+R  V+T G   +G+LGHGDT DR  P  +  L
Sbjct: 597 TRVEGKLLKSF-VEEIACGAYHVAVLTLRNEVYTWGKGANGRLGHGDTDDRNNPTLVDAL 655

Query: 266 EEVGSVVQIAAGPSYMLAV 284
           ++   V  IA G ++  A+
Sbjct: 656 KD-KHVKSIACGTNFTAAI 673


>gi|340711630|ref|XP_003394376.1| PREDICTED: LOW QUALITY PROTEIN: e3 ubiquitin-protein ligase
            HERC2-like [Bombus terrestris]
          Length = 5151

 Score =  137 bits (345), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 96/316 (30%), Positives = 155/316 (49%), Gaps = 9/316 (2%)

Query: 161  SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQ 220
            SA   VQ++  E     V   G+V+  G  ++   G   T+  +  P L+E+++ V  K+
Sbjct: 4323 SALRPVQLTGGEQTLLAVTADGKVYATGYGAAGRLGIGGTDS-VMVPTLLESIQHVFVKK 4381

Query: 221  V--TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS-VVQIAAG 277
            V   +G      L+  GHV++ G    G+LGHG+ L    PK I  L  +G+ +V IA G
Sbjct: 4382 VAVNSGGKHCLALSSEGHVYSWGEGDDGKLGHGNRLMYDRPKLIEEL--LGTEIVDIACG 4439

Query: 278  PSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
              +  A+T  G +Y++G G    LGHG+  D+L P+ ++  +   +  V   +GD   + 
Sbjct: 4440 GHHSAAITSAGWLYTWGKGRYGRLGHGDSEDQLTPKLVEALQDYKVIDVACGSGDAQTLC 4499

Query: 338  LDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVY 397
            +     V++WG G  G LG G      +P  + SL     ++V    + +  L  +G++Y
Sbjct: 4500 VTDDDNVWSWGDGDYGKLGRGGSDGCKIPMKIESLAGLGVIKVECGSQFSVALTRSGAIY 4559

Query: 398  GFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDN 457
             +G   +  LG    G  D V RPR + +L+   +  I+TG  H V  TD+G +F +GDN
Sbjct: 4560 TWGKGDYHRLG---HGTDDHVRRPRKVAALQGKKIISIATGSLHCVACTDKGEVFTWGDN 4616

Query: 458  ERAQLGHDTLRGCLEP 473
            +  QLG  T      P
Sbjct: 4617 DEGQLGDGTTSALQRP 4632



 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 88/274 (32%), Positives = 135/274 (49%), Gaps = 8/274 (2%)

Query: 204  IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 263
            I  P   E L  +    +  G      ++  G ++ CG  T+G+LG GD  +   PK I 
Sbjct: 3280 IKLPVYSEVLSKLKPIHIAGGSKTLFVVSQEGKLYACGEGTNGRLGLGDDSNVCEPKLIP 3339

Query: 264  PLEE-VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKG 322
             L + +   + + +G  + LA+T +G ++S+G G +  LGHG      +PR I++ + K 
Sbjct: 3340 FLSQYMIKKMAVHSGGKHALALTQDGKIFSWGEGEDGKLGHGNSVSLDKPRLIESLKSKR 3399

Query: 323  IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVC- 381
            I    ++ G  H  A+ SSG +YTWG G  G LGHGD   +  P+ + SL     +QV  
Sbjct: 3400 IR--DIACGSGHSAAITSSGELYTWGLGEYGRLGHGDTATQMKPKLVQSLVGQRVIQVAC 3457

Query: 382  -ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLY 440
             +R  +T  L   GSVY +G   FG LG   RG SD    P ++D L    V QI  G  
Sbjct: 3458 GSRDAQTMALTADGSVYSWGDGDFGKLG---RGGSDGCYTPLLIDRLNGLGVVQIECGAQ 3514

Query: 441  HTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPT 474
             ++ +T  G ++ +G  +  +LGH       +PT
Sbjct: 3515 FSLALTKYGEVWTWGKGDYFRLGHGNDHHVRKPT 3548



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 99/325 (30%), Positives = 158/325 (48%), Gaps = 16/325 (4%)

Query: 131  VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE--NHAAFVLQSGQVFTCG 188
            +++CG    G LG G ++  C     I F S   + +++      HA  + Q G++F+ G
Sbjct: 3313 LYACGEGTNGRLGLGDDSNVC-EPKLIPFLSQYMIKKMAVHSGGKHALALTQDGKIFSWG 3371

Query: 189  DNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQL 248
            +      GH ++   + +PRL+E+LK    + +  G   +  +T  G ++T G   +G+L
Sbjct: 3372 EGEDGKLGHGNS-VSLDKPRLIESLKSKRIRDIACGSGHSAAITSSGELYTWGLGEYGRL 3430

Query: 249  GHGDTLDRPTPKSIAPLEEVGS-VVQIAAGP--SYMLAVTGNGVVYSFGSGSNFCLGHGE 305
            GHGDT  +  PK +  L  VG  V+Q+A G   +  +A+T +G VYS+G G    LG G 
Sbjct: 3431 GHGDTATQMKPKLVQSL--VGQRVIQVACGSRDAQTMALTADGSVYSWGDGDFGKLGRGG 3488

Query: 306  QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTL 365
                  P  I   R  G+ VV++  G +  +AL   G V+TWGKG    LGHG++     
Sbjct: 3489 SDGCYTPLLID--RLNGLGVVQIECGAQFSLALTKYGEVWTWGKGDYFRLGHGNDHHVRK 3546

Query: 366  PEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILD 425
            P  +  L+    V V         + DTG VY +G    G  G     V+ K   P ++ 
Sbjct: 3547 PTLVEGLRGKKVVHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNGSTIVNKK---PSLVH 3603

Query: 426  SLRAHHVSQISTGLYHTV--VVTDR 448
             L    V+++S G  H++  V+TD+
Sbjct: 3604 ELDDARVNRVSCGSSHSIAWVLTDQ 3628



 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 96/337 (28%), Positives = 161/337 (47%), Gaps = 17/337 (5%)

Query: 114  MQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHV----VQV 168
            +Q+T G    L ++ +  V++ G    G LG G   +  V        S  HV    V V
Sbjct: 4328 VQLTGGEQTLLAVTADGKVYATGYGAAGRLGIGGTDSVMVPTL---LESIQHVFVKKVAV 4384

Query: 169  SASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIF-RPRLVEALKGVPCKQVTAGLNF 227
            ++   H   +   G V++ G+      GH   NR ++ RP+L+E L G     +  G + 
Sbjct: 4385 NSGGKHCLALSSEGHVYSWGEGDDGKLGH--GNRLMYDRPKLIEELLGTEIVDIACGGHH 4442

Query: 228  TGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSV-VQIAAGPSYMLAVTG 286
            +  +T  G ++T G   +G+LGHGD+ D+ TPK +  L++   + V   +G +  L VT 
Sbjct: 4443 SAAITSAGWLYTWGKGRYGRLGHGDSEDQLTPKLVEALQDYKVIDVACGSGDAQTLCVTD 4502

Query: 287  NGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYT 346
            +  V+S+G G    LG G       P  I++    G+ V++V  G +  VAL  SG +YT
Sbjct: 4503 DDNVWSWGDGDYGKLGRGGSDGCKIPMKIESL--AGLGVIKVECGSQFSVALTRSGAIYT 4560

Query: 347  WGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGS 406
            WGKG    LGHG +     P  +++L+    + +           D G V+ +G    G 
Sbjct: 4561 WGKGDYHRLGHGTDDHVRRPRKVAALQGKKIISIATGSLHCVACTDKGEVFTWGDNDEGQ 4620

Query: 407  LGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV 443
            LG    G +  + RPR++ +L+   +++++ G  HT+
Sbjct: 4621 LG---DGTTSALQRPRLVHALQGKKITRVACGSAHTL 4654



 Score =  119 bits (299), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 87/320 (27%), Positives = 153/320 (47%), Gaps = 17/320 (5%)

Query: 155  TRINFPSAAHV------VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPR 208
            ++I  P  + V      + ++        V Q G+++ CG+ ++   G  D +  +  P+
Sbjct: 3278 SKIKLPVYSEVLSKLKPIHIAGGSKTLFVVSQEGKLYACGEGTNGRLGLGDDSN-VCEPK 3336

Query: 209  LVEALKGVPCKQ--VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 266
            L+  L     K+  V +G      LT  G + + G    G+LGHG+++    P+ I  L+
Sbjct: 3337 LIPFLSQYMIKKMAVHSGGKHALALTQDGKIFSWGEGEDGKLGHGNSVSLDKPRLIESLK 3396

Query: 267  EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVV 326
                +  IA G  +  A+T +G +Y++G G    LGHG+   +++P+ +Q+    G  V+
Sbjct: 3397 S-KRIRDIACGSGHSAAITSSGELYTWGLGEYGRLGHGDTATQMKPKLVQSL--VGQRVI 3453

Query: 327  RVSAG--DEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARK 384
            +V+ G  D   +AL + G VY+WG G  G LG G       P  +  L     VQ+    
Sbjct: 3454 QVACGSRDAQTMALTADGSVYSWGDGDFGKLGRGGSDGCYTPLLIDRLNGLGVVQIECGA 3513

Query: 385  RKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV 444
            + +  L   G V+ +G   +  LG    G    V +P +++ LR   V  ++ G  H + 
Sbjct: 3514 QFSLALTKYGEVWTWGKGDYFRLG---HGNDHHVRKPTLVEGLRGKKVVHVAVGALHCLA 3570

Query: 445  VTDRGRLFGFGDNERAQLGH 464
            VTD G+++ +GDN+  Q G+
Sbjct: 3571 VTDTGQVYAWGDNDHGQQGN 3590



 Score =  105 bits (263), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 86/260 (33%), Positives = 123/260 (47%), Gaps = 14/260 (5%)

Query: 113  NMQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTR---INFPSAAHVVQV 168
             M + +G  H L L  +  +FS G    G LGHG      VS  +   I    +  +  +
Sbjct: 3348 KMAVHSGGKHALALTQDGKIFSWGEGEDGKLGHG----NSVSLDKPRLIESLKSKRIRDI 3403

Query: 169  SASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN-- 226
            +    H+A +  SG+++T G       GH DT   + +P+LV++L G    QV  G    
Sbjct: 3404 ACGSGHSAAITSSGELYTWGLGEYGRLGHGDTATQM-KPKLVQSLVGQRVIQVACGSRDA 3462

Query: 227  FTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTG 286
             T  LT  G V++ G    G+LG G +    TP  I  L  +G VVQI  G  + LA+T 
Sbjct: 3463 QTMALTADGSVYSWGDGDFGKLGRGGSDGCYTPLLIDRLNGLG-VVQIECGAQFSLALTK 3521

Query: 287  NGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYT 346
             G V+++G G  F LGHG  H   +P  ++  R  G  VV V+ G  H +A+  +G VY 
Sbjct: 3522 YGEVWTWGKGDYFRLGHGNDHHVRKPTLVEGLR--GKKVVHVAVGALHCLAVTDTGQVYA 3579

Query: 347  WGKGYCGALGHGDEIDKTLP 366
            WG    G  G+G  I    P
Sbjct: 3580 WGDNDHGQQGNGSTIVNKKP 3599



 Score =  102 bits (254), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 73/247 (29%), Positives = 125/247 (50%), Gaps = 12/247 (4%)

Query: 235  GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
            G ++  G N  GQLG   G  +  P   +S++ L  V    Q+  G   +LAVT +G VY
Sbjct: 4292 GAIYGWGHNHRGQLGGLEGAKVKLPVLCESLSALRPV----QLTGGEQTLLAVTADGKVY 4347

Query: 292  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 351
            + G G+   LG G     + P  +++ +   +  V V++G +H +AL S G+VY+WG+G 
Sbjct: 4348 ATGYGAAGRLGIGGTDSVMVPTLLESIQHVFVKKVAVNSGGKHCLALSSEGHVYSWGEGD 4407

Query: 352  CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 411
             G LGHG+ +    P+ +  L     V +      +  +   G +Y +G   +G LG  D
Sbjct: 4408 DGKLGHGNRLMYDRPKLIEELLGTEIVDIACGGHHSAAITSAGWLYTWGKGRYGRLGHGD 4467

Query: 412  RGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG 469
               S+  L P+++++L+ + V  ++  +G   T+ VTD   ++ +GD +  +LG     G
Sbjct: 4468 ---SEDQLTPKLVEALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRGGSDG 4524

Query: 470  CLEPTEI 476
            C  P +I
Sbjct: 4525 CKIPMKI 4531



 Score = 98.6 bits (244), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 67/244 (27%), Positives = 115/244 (47%), Gaps = 10/244 (4%)

Query: 237  VHTCGSNTHGQLG--HGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 294
            V+  G N   QLG   G  +  P    +  L ++  +  IA G   +  V+  G +Y+ G
Sbjct: 3261 VYVWGLNDKDQLGGLKGSKIKLPVYSEV--LSKLKPI-HIAGGSKTLFVVSQEGKLYACG 3317

Query: 295  SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGA 354
             G+N  LG G+  +  +P+ I    +  I  + V +G +H +AL   G +++WG+G  G 
Sbjct: 3318 EGTNGRLGLGDDSNVCEPKLIPFLSQYMIKKMAVHSGGKHALALTQDGKIFSWGEGEDGK 3377

Query: 355  LGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGV 414
            LGHG+ +    P  + SLKS     +      +  +  +G +Y +G   +G LG  D   
Sbjct: 3378 LGHGNSVSLDKPRLIESLKSKRIRDIACGSGHSAAITSSGELYTWGLGEYGRLGHGDTAT 3437

Query: 415  SDKVLRPRILDSLRAHHVSQISTGLY--HTVVVTDRGRLFGFGDNERAQLGHDTLRGCLE 472
                ++P+++ SL    V Q++ G     T+ +T  G ++ +GD +  +LG     GC  
Sbjct: 3438 Q---MKPKLVQSLVGQRVIQVACGSRDAQTMALTADGSVYSWGDGDFGKLGRGGSDGCYT 3494

Query: 473  PTEI 476
            P  I
Sbjct: 3495 PLLI 3498



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 62/232 (26%), Positives = 110/232 (47%), Gaps = 4/232 (1%)

Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 290
           LT    V++ G+   G+LGHGD +    PK +  L +  ++  IA G +Y   ++ NG +
Sbjct: 520 LTQDSSVYSWGNGDGGRLGHGDRVWYDEPKLVEALVD-KNITFIACGSTYSAVLSSNGEL 578

Query: 291 YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKG 350
           Y++G G+   LGHG   + L P  +       +  V   +GD   + + +SG V++WG G
Sbjct: 579 YTWGRGNYGRLGHGNSDNVLIPTLVTALNGHMVVHVACGSGDSQTLCVTASGIVFSWGDG 638

Query: 351 YCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFP 410
             G LG G       P+ +  L      +V    + +  L   G VY +G      LG  
Sbjct: 639 NYGKLGRGGCDGSKTPKIVDKLLDINVAKVYCGGQFSAALTAYGEVYTWGKGEGYRLG-- 696

Query: 411 DRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQL 462
             G  + +  P++++ L    V ++  G +H + +T+   ++G+G N+  Q+
Sbjct: 697 -HGNEEHIRYPKVIEVLXTKKVKELCVGNFHVLALTEDQLVYGWGRNDYGQI 747



 Score = 88.6 bits (218), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 75/272 (27%), Positives = 123/272 (45%), Gaps = 20/272 (7%)

Query: 93   VLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQC 151
            V   L+S++H           + + +G  H L +S+   V+S G    G LGHG      
Sbjct: 4367 VPTLLESIQH------VFVKKVAVNSGGKHCLALSSEGHVYSWGEGDDGKLGHGNR---- 4416

Query: 152  VSFTR---INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPR 208
            + + R   I       +V ++   +H+A +  +G ++T G       GH D+   +  P+
Sbjct: 4417 LMYDRPKLIEELLGTEIVDIACGGHHSAAITSAGWLYTWGKGRYGRLGHGDSEDQL-TPK 4475

Query: 209  LVEALKGVPCKQVTAGLNFTGFL--TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 266
            LVEAL+      V  G      L  T   +V + G   +G+LG G +     P  I  L 
Sbjct: 4476 LVEALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRGGSDGCKIPMKIESLA 4535

Query: 267  EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVV 326
             +G V+++  G  + +A+T +G +Y++G G    LGHG      +PR +     +G  ++
Sbjct: 4536 GLG-VIKVECGSQFSVALTRSGAIYTWGKGDYHRLGHGTDDHVRRPRKVAAL--QGKKII 4592

Query: 327  RVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 358
             ++ G  H VA    G V+TWG    G LG G
Sbjct: 4593 SIATGSLHCVACTDKGEVFTWGDNDEGQLGDG 4624



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 72/261 (27%), Positives = 122/261 (46%), Gaps = 23/261 (8%)

Query: 117 TTGRYHTLLISNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHVVQVS 169
           + G ++  L  +SSV+S G+   G LGHG       P+  + +    I F        ++
Sbjct: 512 SDGTHYLALTQDSSVYSWGNGDGGRLGHGDRVWYDEPKLVEALVDKNITF--------IA 563

Query: 170 ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT--AGLNF 227
               ++A +  +G+++T G  +    GH +++  +  P LV AL G     V   +G + 
Sbjct: 564 CGSTYSAVLSSNGELYTWGRGNYGRLGHGNSDN-VLIPTLVTALNGHMVVHVACGSGDSQ 622

Query: 228 TGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN 287
           T  +T  G V + G   +G+LG G      TPK +  L ++ +V ++  G  +  A+T  
Sbjct: 623 TLCVTASGIVFSWGDGNYGKLGRGGCDGSKTPKIVDKLLDI-NVAKVYCGGQFSAALTAY 681

Query: 288 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 347
           G VY++G G  + LGHG +     P+ I+    K   V  +  G+ HV+AL     VY W
Sbjct: 682 GEVYTWGKGEGYRLGHGNEEHIRYPKVIEVLXTK--KVKELCVGNFHVLALTEDQLVYGW 739

Query: 348 GKGYCGALGHGDEIDKTLPEP 368
           G+   G +     +   +PEP
Sbjct: 740 GRNDYGQIDPA--LGTVVPEP 758



 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 53/195 (27%), Positives = 88/195 (45%), Gaps = 17/195 (8%)

Query: 281 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 340
           +L+++GN  +  +GS + +            P+ +  F  K + ++   +   H +AL  
Sbjct: 475 ILSISGNVYMMYYGSETQY------------PQRVYGFSEKPVTMIASHSDGTHYLALTQ 522

Query: 341 SGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 400
              VY+WG G  G LGHGD +    P+ + +L       +      + VL   G +Y +G
Sbjct: 523 DSSVYSWGNGDGGRLGHGDRVWYDEPKLVEALVDKNITFIACGSTYSAVLSSNGELYTWG 582

Query: 401 WMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDNE 458
              +G LG    G SD VL P ++ +L  H V  ++  +G   T+ VT  G +F +GD  
Sbjct: 583 RGNYGRLG---HGNSDNVLIPTLVTALNGHMVVHVACGSGDSQTLCVTASGIVFSWGDGN 639

Query: 459 RAQLGHDTLRGCLEP 473
             +LG     G   P
Sbjct: 640 YGKLGRGGCDGSKTP 654


>gi|297598338|ref|NP_001045419.2| Os01g0952300 [Oryza sativa Japonica Group]
 gi|255674079|dbj|BAF07333.2| Os01g0952300 [Oryza sativa Japonica Group]
          Length = 1133

 Score =  137 bits (344), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 101/323 (31%), Positives = 159/323 (49%), Gaps = 22/323 (6%)

Query: 157 INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGV 216
           + F     V  +S    HAA V + G++++ G+ S    GH   +  + +P+L+++L  +
Sbjct: 305 LEFAVRLDVQNISCGGRHAALVTKQGEIYSWGEESGGRLGH-GVDCDVAQPKLIDSLAHM 363

Query: 217 PCKQVTAGLNFTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSI-APLEEVGSVVQ 273
             + V  G   T  +T+ G ++T G  T   G LGHG+ +    PK +  PLE +  V  
Sbjct: 364 NIELVACGEYHTCAVTLSGDLYTWGDGTFKFGLLGHGNDVSHWVPKRVDGPLEGI-HVSS 422

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           I+ GP +   VT  G +++FG GS   LGHG++     PR +++   KG+  VR + G  
Sbjct: 423 ISCGPWHTALVTSAGQLFTFGDGSFGVLGHGDRASLSVPREVESL--KGLRTVRAACGVW 480

Query: 334 HVVAL------------DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVC 381
           H  A+             SSG ++TWG G  G LGHGD+  + +P  +++L      QV 
Sbjct: 481 HTAAVVEVMVGNSSSSNCSSGKIFTWGDGDKGRLGHGDKDSRFVPTCVAALVEPNFCQVA 540

Query: 382 ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYH 441
                T  L  +G VY  G   +G LG P    +D +L  R+   L  + V +IS G YH
Sbjct: 541 CGHCLTVALTTSGHVYTMGSAVYGQLGNPQ---ADGLLPVRVEGKLHKNFVEEISCGAYH 597

Query: 442 TVVVTDRGRLFGFGDNERAQLGH 464
             V+T R  ++ +G     +LGH
Sbjct: 598 VAVLTSRTEVYTWGKGANGRLGH 620



 Score =  112 bits (280), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 94/274 (34%), Positives = 128/274 (46%), Gaps = 21/274 (7%)

Query: 116 ITTGRYHTLLISNSS---VFSCGSSLCGVLGHGPETTQCVSFTRINFP-SAAHVVQVSAS 171
           +  G YHT  ++ S     +  G+   G+LGHG + +  V   R++ P    HV  +S  
Sbjct: 368 VACGEYHTCAVTLSGDLYTWGDGTFKFGLLGHGNDVSHWVP-KRVDGPLEGIHVSSISCG 426

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
             H A V  +GQ+FT GD S    GH D    +  PR VE+LKG+   +   G+  T  +
Sbjct: 427 PWHTALVTSAGQLFTFGDGSFGVLGHGD-RASLSVPREVESLKGLRTVRAACGVWHTAAV 485

Query: 232 T------------IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPS 279
                          G + T G    G+LGHGD   R  P  +A L E  +  Q+A G  
Sbjct: 486 VEVMVGNSSSSNCSSGKIFTWGDGDKGRLGHGDKDSRFVPTCVAALVEP-NFCQVACGHC 544

Query: 280 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 339
             +A+T +G VY+ GS     LG+  Q D L P  ++    K   V  +S G  HV  L 
Sbjct: 545 LTVALTTSGHVYTMGSAVYGQLGN-PQADGLLPVRVEGKLHKNF-VEEISCGAYHVAVLT 602

Query: 340 SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
           S   VYTWGKG  G LGHG   DK  P  + +LK
Sbjct: 603 SRTEVYTWGKGANGRLGHGGTDDKNTPTLVEALK 636



 Score = 92.4 bits (228), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 77/279 (27%), Positives = 128/279 (45%), Gaps = 19/279 (6%)

Query: 207 PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 266
           P+ +E    +  + ++ G      +T +G +++ G  + G+LGHG   D   PK I  L 
Sbjct: 302 PKPLEFAVRLDVQNISCGGRHAALVTKQGEIYSWGEESGGRLGHGVDCDVAQPKLIDSLA 361

Query: 267 EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS-NF-CLGHGEQHDELQPRAIQTFRRKGIH 324
            + ++  +A G  +  AVT +G +Y++G G+  F  LGHG       P+ +     +GIH
Sbjct: 362 HM-NIELVACGEYHTCAVTLSGDLYTWGDGTFKFGLLGHGNDVSHWVPKRVDG-PLEGIH 419

Query: 325 VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARK 384
           V  +S G  H   + S+G ++T+G G  G LGHGD    ++P  + SLK    V+     
Sbjct: 420 VSSISCGPWHTALVTSAGQLFTFGDGSFGVLGHGDRASLSVPREVESLKGLRTVRAACGV 479

Query: 385 RKTFVLVDT------------GSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHV 432
             T  +V+             G ++ +G    G LG  D+   D    P  + +L   + 
Sbjct: 480 WHTAAVVEVMVGNSSSSNCSSGKIFTWGDGDKGRLGHGDK---DSRFVPTCVAALVEPNF 536

Query: 433 SQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCL 471
            Q++ G   TV +T  G ++  G     QLG+    G L
Sbjct: 537 CQVACGHCLTVALTTSGHVYTMGSAVYGQLGNPQADGLL 575



 Score = 88.2 bits (217), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 67/222 (30%), Positives = 105/222 (47%), Gaps = 26/222 (11%)

Query: 271 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 330
           V  I+ G  +   VT  G +YS+G  S   LGHG   D  QP+ I +     I +V  + 
Sbjct: 313 VQNISCGGRHAALVTKQGEIYSWGEESGGRLGHGVDCDVAQPKLIDSLAHMNIELV--AC 370

Query: 331 GDEHVVALDSSGYVYTWGKG--YCGALGHGDEIDKTLPE----PLSSLKSHLAVQVCARK 384
           G+ H  A+  SG +YTWG G    G LGHG+++   +P+    PL  +  H++   C   
Sbjct: 371 GEYHTCAVTLSGDLYTWGDGTFKFGLLGHGNDVSHWVPKRVDGPLEGI--HVSSISCG-P 427

Query: 385 RKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV 444
             T ++   G ++ FG   FG LG  DR     +  PR ++SL+     + + G++HT  
Sbjct: 428 WHTALVTSAGQLFTFGDGSFGVLGHGDRA---SLSVPREVESLKGLRTVRAACGVWHTAA 484

Query: 445 VTD------------RGRLFGFGDNERAQLGHDTLRGCLEPT 474
           V +             G++F +GD ++ +LGH        PT
Sbjct: 485 VVEVMVGNSSSSNCSSGKIFTWGDGDKGRLGHGDKDSRFVPT 526



 Score = 76.6 bits (187), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 68/229 (29%), Positives = 103/229 (44%), Gaps = 26/229 (11%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           I+ G +HT L++++  +F+ G    GVLGHG   +  V    +        V+ +    H
Sbjct: 423 ISCGPWHTALVTSAGQLFTFGDGSFGVLGHGDRASLSVP-REVESLKGLRTVRAACGVWH 481

Query: 175 AAFVLQ------------SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 222
            A V++            SG++FT GD      GH D +   F P  V AL      QV 
Sbjct: 482 TAAVVEVMVGNSSSSNCSSGKIFTWGDGDKGRLGHGDKDS-RFVPTCVAALVEPNFCQVA 540

Query: 223 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS-----VVQIAAG 277
            G   T  LT  GHV+T GS  +GQLG+      P    + P+   G      V +I+ G
Sbjct: 541 CGHCLTVALTTSGHVYTMGSAVYGQLGN------PQADGLLPVRVEGKLHKNFVEEISCG 594

Query: 278 PSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVV 326
             ++  +T    VY++G G+N  LGHG   D+  P  ++  + K +  V
Sbjct: 595 AYHVAVLTSRTEVYTWGKGANGRLGHGGTDDKNTPTLVEALKDKQVRSV 643



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 58/174 (33%), Positives = 87/174 (50%), Gaps = 8/174 (4%)

Query: 306 QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTL 365
           + D L P+ ++   R  + V  +S G  H   +   G +Y+WG+   G LGHG + D   
Sbjct: 296 KMDYLVPKPLEFAVR--LDVQNISCGGRHAALVTKQGEIYSWGEESGGRLGHGVDCDVAQ 353

Query: 366 PEPLSSLKSHLAVQVCA-RKRKTFVLVDTGSVY--GFGWMGFGSLGFPDRGVSDKVLRPR 422
           P+ + SL +H+ +++ A  +  T  +  +G +Y  G G   FG LG  +  VS  V + R
Sbjct: 354 PKLIDSL-AHMNIELVACGEYHTCAVTLSGDLYTWGDGTFKFGLLGHGN-DVSHWVPK-R 410

Query: 423 ILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 476
           +   L   HVS IS G +HT +VT  G+LF FGD     LGH        P E+
Sbjct: 411 VDGPLEGIHVSSISCGPWHTALVTSAGQLFTFGDGSFGVLGHGDRASLSVPREV 464



 Score = 43.5 bits (101), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 51/213 (23%), Positives = 92/213 (43%), Gaps = 14/213 (6%)

Query: 92  RVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQC 151
           R +R    V H++ +VE       +  G   +   S+  +F+ G    G LGHG + ++ 
Sbjct: 471 RTVRAACGVWHTAAVVE-------VMVGNSSSSNCSSGKIFTWGDGDKGRLGHGDKDSRF 523

Query: 152 VSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVE 211
           V  T +      +  QV+        +  SG V+T G       G+   +  +   R+  
Sbjct: 524 VP-TCVAALVEPNFCQVACGHCLTVALTTSGHVYTMGSAVYGQLGNPQADG-LLPVRVEG 581

Query: 212 ALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSV 271
            L     ++++ G      LT R  V+T G   +G+LGHG T D+ TP  +  L++   V
Sbjct: 582 KLHKNFVEEISCGAYHVAVLTSRTEVYTWGKGANGRLGHGGTDDKNTPTLVEALKD-KQV 640

Query: 272 VQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHG 304
             +  G ++  A+     ++ + SGS+  +  G
Sbjct: 641 RSVVCGINFTAAI----CIHKWVSGSDQSMCSG 669


>gi|242059927|ref|XP_002459109.1| hypothetical protein SORBIDRAFT_03g046020 [Sorghum bicolor]
 gi|241931084|gb|EES04229.1| hypothetical protein SORBIDRAFT_03g046020 [Sorghum bicolor]
          Length = 892

 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 103/329 (31%), Positives = 160/329 (48%), Gaps = 22/329 (6%)

Query: 151 CVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLV 210
           C+    + F     V  +S    HAA V + G++++ G+ S    GH   +  + +P+L+
Sbjct: 98  CLVPKPLEFAVRLDVQNISCGGRHAALVTKQGEIYSWGEESGGRLGH-GVDCDVSQPKLI 156

Query: 211 EALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSI-APLEE 267
           +AL  +  + V  G   T  +T+ G ++T G  T   G LGHG+ +    PK +  PLE 
Sbjct: 157 DALSHMNIELVACGEYHTCAVTLSGDLYTWGDGTFKFGLLGHGNDVSHWVPKHVNGPLEG 216

Query: 268 VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVR 327
           +  V  I+ GP +   VT  G +++FG GS   LGHG++     PR +++   KG+  VR
Sbjct: 217 I-HVSSISCGPWHTALVTSAGQLFTFGDGSFGVLGHGDRESISVPREVESL--KGLRTVR 273

Query: 328 VSAGDEHVVAL------------DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSH 375
            + G  H  A+             SSG ++TWG G  G LGHGD+  K +P  +++L   
Sbjct: 274 AACGVWHTAAVVEVMAGNSSSSNCSSGKIFTWGDGDKGRLGHGDKEAKLVPTCVAALVEP 333

Query: 376 LAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQI 435
              QV      T  L  +G VY  G   +G LG      +D +L  R+   L  + V +I
Sbjct: 334 NFCQVACGHCLTVALTTSGHVYTMGSAVYGQLGNTQ---ADGMLPVRVEGKLHKNFVEEI 390

Query: 436 STGLYHTVVVTDRGRLFGFGDNERAQLGH 464
           S G YH  V+T R  ++ +G     +LGH
Sbjct: 391 SCGAYHVAVLTSRTEVYTWGKGANGRLGH 419



 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 94/274 (34%), Positives = 128/274 (46%), Gaps = 21/274 (7%)

Query: 116 ITTGRYHTLLISNSS---VFSCGSSLCGVLGHGPETTQCVSFTRINFP-SAAHVVQVSAS 171
           +  G YHT  ++ S     +  G+   G+LGHG + +  V    +N P    HV  +S  
Sbjct: 167 VACGEYHTCAVTLSGDLYTWGDGTFKFGLLGHGNDVSHWVP-KHVNGPLEGIHVSSISCG 225

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
             H A V  +GQ+FT GD S    GH D    I  PR VE+LKG+   +   G+  T  +
Sbjct: 226 PWHTALVTSAGQLFTFGDGSFGVLGHGD-RESISVPREVESLKGLRTVRAACGVWHTAAV 284

Query: 232 T------------IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPS 279
                          G + T G    G+LGHGD   +  P  +A L E  +  Q+A G  
Sbjct: 285 VEVMAGNSSSSNCSSGKIFTWGDGDKGRLGHGDKEAKLVPTCVAALVEP-NFCQVACGHC 343

Query: 280 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 339
             +A+T +G VY+ GS     LG+  Q D + P  ++    K   V  +S G  HV  L 
Sbjct: 344 LTVALTTSGHVYTMGSAVYGQLGN-TQADGMLPVRVEGKLHKNF-VEEISCGAYHVAVLT 401

Query: 340 SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
           S   VYTWGKG  G LGHGD  DK  P  + +LK
Sbjct: 402 SRTEVYTWGKGANGRLGHGDTDDKNTPTLVEALK 435



 Score = 92.0 bits (227), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 68/222 (30%), Positives = 106/222 (47%), Gaps = 26/222 (11%)

Query: 271 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 330
           V  I+ G  +   VT  G +YS+G  S   LGHG   D  QP+ I       I +V  + 
Sbjct: 112 VQNISCGGRHAALVTKQGEIYSWGEESGGRLGHGVDCDVSQPKLIDALSHMNIELV--AC 169

Query: 331 GDEHVVALDSSGYVYTWGKG--YCGALGHGDEIDKTLPE----PLSSLKSHLAVQVCARK 384
           G+ H  A+  SG +YTWG G    G LGHG+++   +P+    PL  +  H++   C   
Sbjct: 170 GEYHTCAVTLSGDLYTWGDGTFKFGLLGHGNDVSHWVPKHVNGPLEGI--HVSSISCG-P 226

Query: 385 RKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV 444
             T ++   G ++ FG   FG LG  DR   + +  PR ++SL+     + + G++HT  
Sbjct: 227 WHTALVTSAGQLFTFGDGSFGVLGHGDR---ESISVPREVESLKGLRTVRAACGVWHTAA 283

Query: 445 VTD------------RGRLFGFGDNERAQLGHDTLRGCLEPT 474
           V +             G++F +GD ++ +LGH      L PT
Sbjct: 284 VVEVMAGNSSSSNCSSGKIFTWGDGDKGRLGHGDKEAKLVPT 325



 Score = 75.1 bits (183), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 67/225 (29%), Positives = 103/225 (45%), Gaps = 18/225 (8%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSASEN 173
           I+ G +HT L++++  +F+ G    GVLGHG    + +S  R +        V+ +    
Sbjct: 222 ISCGPWHTALVTSAGQLFTFGDGSFGVLGHGDR--ESISVPREVESLKGLRTVRAACGVW 279

Query: 174 HAAFVLQ------------SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQV 221
           H A V++            SG++FT GD      GH D    +  P  V AL      QV
Sbjct: 280 HTAAVVEVMAGNSSSSNCSSGKIFTWGDGDKGRLGHGDKEAKLV-PTCVAALVEPNFCQV 338

Query: 222 TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 281
             G   T  LT  GHV+T GS  +GQLG+    D   P  +        V +I+ G  ++
Sbjct: 339 ACGHCLTVALTTSGHVYTMGSAVYGQLGNTQA-DGMLPVRVEGKLHKNFVEEISCGAYHV 397

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVV 326
             +T    VY++G G+N  LGHG+  D+  P  ++  + K +  V
Sbjct: 398 AVLTSRTEVYTWGKGANGRLGHGDTDDKNTPTLVEALKDKQVRSV 442



 Score = 72.4 bits (176), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 57/174 (32%), Positives = 87/174 (50%), Gaps = 8/174 (4%)

Query: 306 QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTL 365
           + D L P+ ++   R  + V  +S G  H   +   G +Y+WG+   G LGHG + D + 
Sbjct: 95  KMDCLVPKPLEFAVR--LDVQNISCGGRHAALVTKQGEIYSWGEESGGRLGHGVDCDVSQ 152

Query: 366 PEPLSSLKSHLAVQVCA-RKRKTFVLVDTGSVY--GFGWMGFGSLGFPDRGVSDKVLRPR 422
           P+ + +L SH+ +++ A  +  T  +  +G +Y  G G   FG LG  +  VS  V +  
Sbjct: 153 PKLIDAL-SHMNIELVACGEYHTCAVTLSGDLYTWGDGTFKFGLLGHGN-DVSHWVPK-H 209

Query: 423 ILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 476
           +   L   HVS IS G +HT +VT  G+LF FGD     LGH        P E+
Sbjct: 210 VNGPLEGIHVSSISCGPWHTALVTSAGQLFTFGDGSFGVLGHGDRESISVPREV 263



 Score = 46.2 bits (108), Expect = 0.033,   Method: Compositional matrix adjust.
 Identities = 50/193 (25%), Positives = 84/193 (43%), Gaps = 10/193 (5%)

Query: 92  RVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQC 151
           R +R    V H++ +VE  AGN   +         S+  +F+ G    G LGHG +  + 
Sbjct: 270 RTVRAACGVWHTAAVVEVMAGNSSSSN-------CSSGKIFTWGDGDKGRLGHGDKEAKL 322

Query: 152 VSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVE 211
           V  T +      +  QV+        +  SG V+T G       G+   +  +   R+  
Sbjct: 323 VP-TCVAALVEPNFCQVACGHCLTVALTTSGHVYTMGSAVYGQLGNTQADG-MLPVRVEG 380

Query: 212 ALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSV 271
            L     ++++ G      LT R  V+T G   +G+LGHGDT D+ TP  +  L++   V
Sbjct: 381 KLHKNFVEEISCGAYHVAVLTSRTEVYTWGKGANGRLGHGDTDDKNTPTLVEALKD-KQV 439

Query: 272 VQIAAGPSYMLAV 284
             +  G ++  A+
Sbjct: 440 RSVVCGINFTAAI 452



 Score = 43.9 bits (102), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 38/127 (29%), Positives = 59/127 (46%), Gaps = 9/127 (7%)

Query: 115 QITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAH---VVQVSA 170
           Q+  G   T+ ++ S  V++ GS++ G LG+    TQ      +      H   V ++S 
Sbjct: 337 QVACGHCLTVALTTSGHVYTMGSAVYGQLGN----TQADGMLPVRVEGKLHKNFVEEISC 392

Query: 171 SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
              H A +    +V+T G  ++   GH DT+     P LVEALK    + V  G+NFT  
Sbjct: 393 GAYHVAVLTSRTEVYTWGKGANGRLGHGDTDDK-NTPTLVEALKDKQVRSVVCGINFTAA 451

Query: 231 LTIRGHV 237
           + I   V
Sbjct: 452 ICIHKWV 458


>gi|345494372|ref|XP_001602409.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like [Nasonia
           vitripennis]
          Length = 1083

 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 110/359 (30%), Positives = 177/359 (49%), Gaps = 15/359 (4%)

Query: 124 LLISNSSVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSASENHAAFVLQSG 182
           L+ ++++++  GS++ G LG G    + +   R ++F  A  V Q++  E H   + + G
Sbjct: 21  LIPNDNNMYCWGSTVYGELGLGGIEDENILMPRELDFQKATAVEQIACGETHTVLITKDG 80

Query: 183 QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 242
           +VF+CG+N S   GH    +P  R +++  L     KQ   G + +  +   G +   GS
Sbjct: 81  EVFSCGNNDSGQLGHE---KPTKRLQMIPGLDAFIFKQAACGASHSVAVNNWGQLFCWGS 137

Query: 243 NTHGQLGHGDTLDRP-TPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCL 301
           N  GQLG G  L    TP+ +  L     VVQIA G  + LA+T NG +Y++GS S+  L
Sbjct: 138 NADGQLGLGTPLTIAHTPRMVKAL-GTSIVVQIACGKKHTLALTNNGELYAWGSNSDGQL 196

Query: 302 GHGEQ-HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 360
           G G+    E +P+ I       I +  ++ G  H + +  SG V+ WG+   G LG  D 
Sbjct: 197 GLGQDVKIETRPKLITGL--ATIPIAFIACGGYHSIVVSKSGAVFGWGRNTFGQLGMNDI 254

Query: 361 IDKTLPEPLSSLK-SHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVL 419
            DK +P  L +L+ + +    C  +   F+ +D G V+  G   +G LG    G +   +
Sbjct: 255 SDKYVPCLLKTLRNAKVKYVACGEEFSVFLTMD-GGVFTCGAGMYGQLG---HGANSNEI 310

Query: 420 RPRILDSLRAHHVSQISTGLYHTV-VVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF 477
            PR +  L    V+QIS G  HT+ +V  RG+++ +G     QLG  T R    P  + 
Sbjct: 311 LPRQIIELMGSVVTQISCGKRHTLALVPSRGKVYAWGLGGSGQLGSQTARSVATPQMVL 369



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 91/288 (31%), Positives = 135/288 (46%), Gaps = 9/288 (3%)

Query: 115 QITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
           QI  G  HT+LI+ +  VFSCG++  G LGH   T +      ++   A    Q +   +
Sbjct: 65  QIACGETHTVLITKDGEVFSCGNNDSGQLGHEKPTKRLQMIPGLD---AFIFKQAACGAS 121

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
           H+  V   GQ+F  G N+    G          PR+V+AL      Q+  G   T  LT 
Sbjct: 122 HSVAVNNWGQLFCWGSNADGQLGLGTPLTIAHTPRMVKALGTSIVVQIACGKKHTLALTN 181

Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPT-PKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
            G ++  GSN+ GQLG G  +   T PK I  L  +  +  IA G  + + V+ +G V+ 
Sbjct: 182 NGELYAWGSNSDGQLGLGQDVKIETRPKLITGLATI-PIAFIACGGYHSIVVSKSGAVFG 240

Query: 293 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 352
           +G  +   LG  +  D+  P  ++T R   +  V  + G+E  V L   G V+T G G  
Sbjct: 241 WGRNTFGQLGMNDISDKYVPCLLKTLRNAKVKYV--ACGEEFSVFLTMDGGVFTCGAGMY 298

Query: 353 GALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDT-GSVYGF 399
           G LGHG   ++ LP  +  L   +  Q+   KR T  LV + G VY +
Sbjct: 299 GQLGHGANSNEILPRQIIELMGSVVTQISCGKRHTLALVPSRGKVYAW 346



 Score = 79.3 bits (194), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 62/183 (33%), Positives = 94/183 (51%), Gaps = 6/183 (3%)

Query: 114 MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +QI  G+ HTL L +N  +++ GS+  G LG G +         I   +   +  ++   
Sbjct: 167 VQIACGKKHTLALTNNGELYAWGSNSDGQLGLGQDVKIETRPKLITGLATIPIAFIACGG 226

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            H+  V +SG VF  G N+    G  D +   + P L++ L+    K V  G  F+ FLT
Sbjct: 227 YHSIVVSKSGAVFGWGRNTFGQLGMNDISDK-YVPCLLKTLRNAKVKYVACGEEFSVFLT 285

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVV 290
           + G V TCG+  +GQLGHG   +   P+ I  +E +GSVV QI+ G  + LA V   G V
Sbjct: 286 MDGGVFTCGAGMYGQLGHGANSNEILPRQI--IELMGSVVTQISCGKRHTLALVPSRGKV 343

Query: 291 YSF 293
           Y++
Sbjct: 344 YAW 346


>gi|307176782|gb|EFN66182.1| Probable E3 ubiquitin-protein ligase HERC2 [Camponotus floridanus]
          Length = 4802

 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 93/315 (29%), Positives = 156/315 (49%), Gaps = 7/315 (2%)

Query: 161  SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQ 220
            SA   +Q++  E     V   G+V++ G  ++   G   T+  +  P L+E+++ V  K+
Sbjct: 3974 SALRPIQLAGGEQTLFAVTADGKVYSTGYGAAGRLGIGGTDS-VMIPTLLESIQHVFIKK 4032

Query: 221  V--TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGP 278
            V  ++G      L+  GHV++ G    G+LGHG+ +    PK I  L  V  ++ IA G 
Sbjct: 4033 VAVSSGGKHCLALSSEGHVYSWGEGDDGKLGHGNKMSYDRPKLIEDLLGV-EIIDIACGG 4091

Query: 279  SYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
             +  A+T  G +Y++G G    LGHG+  D+L+P+ ++  +   +  V   +GD   + +
Sbjct: 4092 HHSAAITSAGWLYTWGKGRYGRLGHGDSDDQLRPKVVEALQDYKVIDVACGSGDAQTLCV 4151

Query: 339  DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYG 398
                 V++WG G  G LG G      +P  + SL     ++V    + +  L  +G+VY 
Sbjct: 4152 TDDDNVWSWGDGDYGKLGRGGSDGCKVPLKIDSLAGLGVIKVECGSQFSVALTRSGAVYT 4211

Query: 399  FGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNE 458
            +G   +  LG    G  D V RPR + +L+   +  I+TG  H V  +D+G +F +GDN+
Sbjct: 4212 WGKGDYHRLG---HGTDDHVRRPRKVAALQGKKIISIATGSLHCVACSDKGEVFTWGDND 4268

Query: 459  RAQLGHDTLRGCLEP 473
              QLG  T      P
Sbjct: 4269 EGQLGDGTTSALHRP 4283



 Score =  131 bits (329), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 96/311 (30%), Positives = 149/311 (47%), Gaps = 9/311 (2%)

Query: 167  QVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN 226
            QV+   +  A   Q   V+  G N     G    ++ I  P   E L  +    +  G  
Sbjct: 2946 QVAVQRSIDATPPQESAVYVWGLNDKDQLGGLKGSK-IKLPVYSEVLSKLKPIHIAGGSK 3004

Query: 227  FTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEE-VGSVVQIAAGPSYMLAVT 285
                ++  G ++ CG  T+G+LG GD  +   PK I  L + V   V + +G  + LA+T
Sbjct: 3005 TLFIVSQEGKLYACGEGTNGRLGLGDDNNVCEPKPIPFLSQFVIKKVAVHSGGKHALALT 3064

Query: 286  GNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVY 345
             +G V+S+G G +  LGHG      +P+ I+T + K I    ++ G  H  A+ S+G +Y
Sbjct: 3065 QDGKVFSWGEGEDGKLGHGNNMSLDKPKLIETLKSKRIR--DIACGSGHSAAIASNGELY 3122

Query: 346  TWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVC--ARKRKTFVLVDTGSVYGFGWMG 403
            TWG G  G LGHGD + +  P+ + +L  H  VQV   +R  +T  L   G VY +G   
Sbjct: 3123 TWGLGEYGRLGHGDTVTQARPKLVQTLVGHRVVQVACGSRDAQTMALTTDGCVYSWGDGD 3182

Query: 404  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 463
            FG LG   RG SD    P +++ L    V Q+  G   ++ +T  G ++ +G  +  +LG
Sbjct: 3183 FGKLG---RGGSDGCYTPLVVERLNGLGVVQVECGAQFSLALTKYGEVWTWGKGDYFRLG 3239

Query: 464  HDTLRGCLEPT 474
            H       +PT
Sbjct: 3240 HGNDHHVRKPT 3250



 Score =  125 bits (313), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 98/318 (30%), Positives = 152/318 (47%), Gaps = 14/318 (4%)

Query: 131  VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHV--VQVSASENHAAFVLQSGQVFTCG 188
            +++CG    G LG G +   C     I F S   +  V V +   HA  + Q G+VF+ G
Sbjct: 3015 LYACGEGTNGRLGLGDDNNVC-EPKPIPFLSQFVIKKVAVHSGGKHALALTQDGKVFSWG 3073

Query: 189  DNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQL 248
            +      GH + N  + +P+L+E LK    + +  G   +  +   G ++T G   +G+L
Sbjct: 3074 EGEDGKLGHGN-NMSLDKPKLIETLKSKRIRDIACGSGHSAAIASNGELYTWGLGEYGRL 3132

Query: 249  GHGDTLDRPTPKSIAPLEEVG-SVVQIAAGP--SYMLAVTGNGVVYSFGSGSNFCLGHGE 305
            GHGDT+ +  PK +  L  VG  VVQ+A G   +  +A+T +G VYS+G G    LG G 
Sbjct: 3133 GHGDTVTQARPKLVQTL--VGHRVVQVACGSRDAQTMALTTDGCVYSWGDGDFGKLGRGG 3190

Query: 306  QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTL 365
                  P  ++  R  G+ VV+V  G +  +AL   G V+TWGKG    LGHG++     
Sbjct: 3191 SDGCYTPLVVE--RLNGLGVVQVECGAQFSLALTKYGEVWTWGKGDYFRLGHGNDHHVRK 3248

Query: 366  PEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILD 425
            P  +  L+    V V         + DTG VY +G    G  G    G +    +P ++ 
Sbjct: 3249 PTLVEGLRGKKIVHVAVGALHCLAVTDTGQVYAWGDNDHGQQG---NGTTSVNRKPSLVH 3305

Query: 426  SLRAHHVSQISTGLYHTV 443
             L    V+++S G  H++
Sbjct: 3306 ELEDARVNRVSCGSSHSI 3323



 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 95/339 (28%), Positives = 158/339 (46%), Gaps = 19/339 (5%)

Query: 155  TRINFPSAAHV------VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPR 208
            ++I  P  + V      + ++        V Q G+++ CG+ ++   G  D N  +  P+
Sbjct: 2980 SKIKLPVYSEVLSKLKPIHIAGGSKTLFIVSQEGKLYACGEGTNGRLGLGDDNN-VCEPK 3038

Query: 209  LVEALKGVPCKQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 266
             +  L     K+V   +G      LT  G V + G    G+LGHG+ +    PK I  L+
Sbjct: 3039 PIPFLSQFVIKKVAVHSGGKHALALTQDGKVFSWGEGEDGKLGHGNNMSLDKPKLIETLK 3098

Query: 267  EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVV 326
                +  IA G  +  A+  NG +Y++G G    LGHG+   + +P+ +QT    G  VV
Sbjct: 3099 S-KRIRDIACGSGHSAAIASNGELYTWGLGEYGRLGHGDTVTQARPKLVQTL--VGHRVV 3155

Query: 327  RVSAG--DEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARK 384
            +V+ G  D   +AL + G VY+WG G  G LG G       P  +  L     VQV    
Sbjct: 3156 QVACGSRDAQTMALTTDGCVYSWGDGDFGKLGRGGSDGCYTPLVVERLNGLGVVQVECGA 3215

Query: 385  RKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV 444
            + +  L   G V+ +G   +  LG    G    V +P +++ LR   +  ++ G  H + 
Sbjct: 3216 QFSLALTKYGEVWTWGKGDYFRLG---HGNDHHVRKPTLVEGLRGKKIVHVAVGALHCLA 3272

Query: 445  VTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQEMEE 483
            VTD G+++ +GDN+  Q G+ T     +P+   + E+E+
Sbjct: 3273 VTDTGQVYAWGDNDHGQQGNGTTSVNRKPS--LVHELED 3309



 Score =  118 bits (296), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 95/325 (29%), Positives = 154/325 (47%), Gaps = 16/325 (4%)

Query: 125  LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHV----VQVSASENHAAFVLQ 180
            + ++  V+S G    G LG G   T  V    +   S  HV    V VS+   H   +  
Sbjct: 3991 VTADGKVYSTGYGAAGRLGIG--GTDSVMIPTL-LESIQHVFIKKVAVSSGGKHCLALSS 4047

Query: 181  SGQVFTCGDNSSFCCGHRDTNRPIF-RPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 239
             G V++ G+      GH   N+  + RP+L+E L GV    +  G + +  +T  G ++T
Sbjct: 4048 EGHVYSWGEGDDGKLGH--GNKMSYDRPKLIEDLLGVEIIDIACGGHHSAAITSAGWLYT 4105

Query: 240  CGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSV-VQIAAGPSYMLAVTGNGVVYSFGSGSN 298
             G   +G+LGHGD+ D+  PK +  L++   + V   +G +  L VT +  V+S+G G  
Sbjct: 4106 WGKGRYGRLGHGDSDDQLRPKVVEALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDY 4165

Query: 299  FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 358
              LG G       P  I +    G+ V++V  G +  VAL  SG VYTWGKG    LGHG
Sbjct: 4166 GKLGRGGSDGCKVPLKIDSL--AGLGVIKVECGSQFSVALTRSGAVYTWGKGDYHRLGHG 4223

Query: 359  DEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKV 418
             +     P  +++L+    + +           D G V+ +G    G LG    G +  +
Sbjct: 4224 TDDHVRRPRKVAALQGKKIISIATGSLHCVACSDKGEVFTWGDNDEGQLG---DGTTSAL 4280

Query: 419  LRPRILDSLRAHHVSQISTGLYHTV 443
             RPR++ +L+   +++++ G  HT+
Sbjct: 4281 HRPRLVHALQGKKITRVACGSAHTL 4305



 Score =  118 bits (295), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 78/246 (31%), Positives = 129/246 (52%), Gaps = 10/246 (4%)

Query: 235  GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSV--VQIAAGPSYMLAVTGNGVVYS 292
            G ++  G N  GQLG    L+ P  K  AP E + ++  +Q+A G   + AVT +G VYS
Sbjct: 3943 GAIYGWGHNHRGQLG---GLEGPKVKLPAPCESLSALRPIQLAGGEQTLFAVTADGKVYS 3999

Query: 293  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 352
             G G+   LG G     + P  +++ +   I  V VS+G +H +AL S G+VY+WG+G  
Sbjct: 4000 TGYGAAGRLGIGGTDSVMIPTLLESIQHVFIKKVAVSSGGKHCLALSSEGHVYSWGEGDD 4059

Query: 353  GALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDR 412
            G LGHG+++    P+ +  L     + +      +  +   G +Y +G   +G LG  D 
Sbjct: 4060 GKLGHGNKMSYDRPKLIEDLLGVEIIDIACGGHHSAAITSAGWLYTWGKGRYGRLGHGD- 4118

Query: 413  GVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGC 470
              SD  LRP+++++L+ + V  ++  +G   T+ VTD   ++ +GD +  +LG     GC
Sbjct: 4119 --SDDQLRPKVVEALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRGGSDGC 4176

Query: 471  LEPTEI 476
              P +I
Sbjct: 4177 KVPLKI 4182



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 74/232 (31%), Positives = 119/232 (51%), Gaps = 4/232 (1%)

Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 290
           LT  G V++ G+   G+LGHGDT+    PK I  L E  ++V IA G +Y  A++ +G +
Sbjct: 524 LTQDGCVYSWGNGDGGRLGHGDTVSYDEPKLIEALLE-KNIVFIACGSTYSAALSVSGEL 582

Query: 291 YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKG 350
           Y++G G+   LGHG   D + P  + T +   +  V   +GD   + + +SG V++WG G
Sbjct: 583 YTWGRGNYGRLGHGNFDDVMIPTLVTTLKGHTVVHVACGSGDSQTLCVTASGIVFSWGDG 642

Query: 351 YCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFP 410
             G LG G       P+ +  L     V+V    + +  L   G VY +G      LG  
Sbjct: 643 DYGKLGRGGTDGSKTPKIVDKLLDINVVKVFCGSQFSAALTAHGEVYTWGKGDTYRLG-- 700

Query: 411 DRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQL 462
             G  + V  P+I++SLR   +  +S G  H +V+T+   ++G+G N+  Q+
Sbjct: 701 -HGSEEHVRYPKIIESLRDKKIKDLSVGATHILVLTEDQFVYGWGRNDYGQI 751



 Score =  102 bits (254), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 79/268 (29%), Positives = 126/268 (47%), Gaps = 9/268 (3%)

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            H   + Q G V++ G+      GH DT      P+L+EAL       +  G  ++  L+
Sbjct: 519 KHHLALTQDGCVYSWGNGDGGRLGHGDT-VSYDEPKLIEALLEKNIVFIACGSTYSAALS 577

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA--AGPSYMLAVTGNGVV 290
           + G ++T G   +G+LGHG+  D   P  +  L+   +VV +A  +G S  L VT +G+V
Sbjct: 578 VSGELYTWGRGNYGRLGHGNFDDVMIPTLVTTLKG-HTVVHVACGSGDSQTLCVTASGIV 636

Query: 291 YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKG 350
           +S+G G    LG G       P+ +       I+VV+V  G +   AL + G VYTWGKG
Sbjct: 637 FSWGDGDYGKLGRGGTDGSKTPKIVDKLL--DINVVKVFCGSQFSAALTAHGEVYTWGKG 694

Query: 351 YCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFP 410
               LGHG E     P+ + SL+      +        VL +   VYG+G   +G +   
Sbjct: 695 DTYRLGHGSEEHVRYPKIIESLRDKKIKDLSVGATHILVLTEDQFVYGWGRNDYGQI--- 751

Query: 411 DRGVSDKVLRPRILDSLRAHHVSQISTG 438
           D  +   +  P +  +L +  V  +++G
Sbjct: 752 DPTLGSVISEPTLCPTLSSKTVIGLASG 779



 Score = 99.4 bits (246), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 79/249 (31%), Positives = 116/249 (46%), Gaps = 21/249 (8%)

Query: 119  GRYHTLLISNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHVVQVSAS 171
            G++   L  +  VFS G    G LGHG       P+  + +   RI          ++  
Sbjct: 3057 GKHALALTQDGKVFSWGEGEDGKLGHGNNMSLDKPKLIETLKSKRIR--------DIACG 3108

Query: 172  ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN--FTG 229
              H+A +  +G+++T G       GH DT     RP+LV+ L G    QV  G     T 
Sbjct: 3109 SGHSAAIASNGELYTWGLGEYGRLGHGDTVTQA-RPKLVQTLVGHRVVQVACGSRDAQTM 3167

Query: 230  FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 289
             LT  G V++ G    G+LG G +    TP  +  L  +G VVQ+  G  + LA+T  G 
Sbjct: 3168 ALTTDGCVYSWGDGDFGKLGRGGSDGCYTPLVVERLNGLG-VVQVECGAQFSLALTKYGE 3226

Query: 290  VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 349
            V+++G G  F LGHG  H   +P  ++  R  G  +V V+ G  H +A+  +G VY WG 
Sbjct: 3227 VWTWGKGDYFRLGHGNDHHVRKPTLVEGLR--GKKIVHVAVGALHCLAVTDTGQVYAWGD 3284

Query: 350  GYCGALGHG 358
               G  G+G
Sbjct: 3285 NDHGQQGNG 3293



 Score = 98.2 bits (243), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 98/362 (27%), Positives = 164/362 (45%), Gaps = 33/362 (9%)

Query: 46  HGLYPQKFRSLVDLAASQLCALHSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSD 105
           +G  P    ++ +L   QLC        +S N  +   N  +G+     ++ Q V   SD
Sbjct: 452 NGSTPFYCDAIAELGIKQLCCTERALMILSLNGNV--YNMYHGS---ETQYPQRVHGFSD 506

Query: 106 IVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSA--- 162
            + T   +   + G++H  L  +  V+S G+   G LGHG      VS+       A   
Sbjct: 507 KLVTMIASH--SDGKHHLALTQDGCVYSWGNGDGGRLGHG----DTVSYDEPKLIEALLE 560

Query: 163 AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 222
            ++V ++    ++A +  SG+++T G  +    GH + +  +  P LV  LKG     V 
Sbjct: 561 KNIVFIACGSTYSAALSVSGELYTWGRGNYGRLGHGNFDD-VMIPTLVTTLKGHTVVHVA 619

Query: 223 --AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 280
             +G + T  +T  G V + G   +G+LG G T    TPK +  L ++ +VV++  G  +
Sbjct: 620 CGSGDSQTLCVTASGIVFSWGDGDYGKLGRGGTDGSKTPKIVDKLLDI-NVVKVFCGSQF 678

Query: 281 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 340
             A+T +G VY++G G  + LGHG +     P+ I++ R K I    +S G  H++ L  
Sbjct: 679 SAALTAHGEVYTWGKGDTYRLGHGSEEHVRYPKIIESLRDKKIK--DLSVGATHILVLTE 736

Query: 341 SGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCAR-KRKTFVLVDTGSVYGF 399
             +VY WG+   G      +ID TL   +S         +C     KT + + +G    F
Sbjct: 737 DQFVYGWGRNDYG------QIDPTLGSVISE------PTLCPTLSSKTVIGLASGPTQSF 784

Query: 400 GW 401
            W
Sbjct: 785 AW 786



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 75/269 (27%), Positives = 127/269 (47%), Gaps = 20/269 (7%)

Query: 96   FLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSF 154
             L+S++H           + +++G  H L +S+   V+S G    G LGHG +    +S+
Sbjct: 4021 LLESIQH------VFIKKVAVSSGGKHCLALSSEGHVYSWGEGDDGKLGHGNK----MSY 4070

Query: 155  TR---INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVE 211
             R   I       ++ ++   +H+A +  +G ++T G       GH D++  + RP++VE
Sbjct: 4071 DRPKLIEDLLGVEIIDIACGGHHSAAITSAGWLYTWGKGRYGRLGHGDSDDQL-RPKVVE 4129

Query: 212  ALKGVPCKQVTAGLNFTGFL--TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG 269
            AL+      V  G      L  T   +V + G   +G+LG G +     P  I  L  +G
Sbjct: 4130 ALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRGGSDGCKVPLKIDSLAGLG 4189

Query: 270  SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS 329
             V+++  G  + +A+T +G VY++G G    LGHG      +PR +     +G  ++ ++
Sbjct: 4190 -VIKVECGSQFSVALTRSGAVYTWGKGDYHRLGHGTDDHVRRPRKVAAL--QGKKIISIA 4246

Query: 330  AGDEHVVALDSSGYVYTWGKGYCGALGHG 358
             G  H VA    G V+TWG    G LG G
Sbjct: 4247 TGSLHCVACSDKGEVFTWGDNDEGQLGDG 4275



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 58/218 (26%), Positives = 100/218 (45%), Gaps = 16/218 (7%)

Query: 258 TPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQT 317
           TP     + E+G + Q+      ++ ++ NG VY+   GS          +   P+ +  
Sbjct: 455 TPFYCDAIAELG-IKQLCCTERALMILSLNGNVYNMYHGS----------ETQYPQRVHG 503

Query: 318 FRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLA 377
           F  K + ++   +  +H +AL   G VY+WG G  G LGHGD +    P+ + +L     
Sbjct: 504 FSDKLVTMIASHSDGKHHLALTQDGCVYSWGNGDGGRLGHGDTVSYDEPKLIEALLEKNI 563

Query: 378 VQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS- 436
           V +      +  L  +G +Y +G   +G LG    G  D V+ P ++ +L+ H V  ++ 
Sbjct: 564 VFIACGSTYSAALSVSGELYTWGRGNYGRLG---HGNFDDVMIPTLVTTLKGHTVVHVAC 620

Query: 437 -TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEP 473
            +G   T+ VT  G +F +GD +  +LG     G   P
Sbjct: 621 GSGDSQTLCVTASGIVFSWGDGDYGKLGRGGTDGSKTP 658



 Score = 64.7 bits (156), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 37/135 (27%), Positives = 70/135 (51%), Gaps = 5/135 (3%)

Query: 332  DEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 391
            ++  ++ D SG +Y WG  + G LG  +     LP P  SL +   +Q+   ++  F + 
Sbjct: 3933 EDWTLSWDGSGAIYGWGHNHRGQLGGLEGPKVKLPAPCESLSALRPIQLAGGEQTLFAVT 3992

Query: 392  DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQ--ISTGLYHTVVVTDRG 449
              G VY  G+   G LG    G +D V+ P +L+S++   + +  +S+G  H + ++  G
Sbjct: 3993 ADGKVYSTGYGAAGRLGI---GGTDSVMIPTLLESIQHVFIKKVAVSSGGKHCLALSSEG 4049

Query: 450  RLFGFGDNERAQLGH 464
             ++ +G+ +  +LGH
Sbjct: 4050 HVYSWGEGDDGKLGH 4064


>gi|332027112|gb|EGI67208.1| Putative E3 ubiquitin-protein ligase HERC2 [Acromyrmex echinatior]
          Length = 4853

 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 94/315 (29%), Positives = 156/315 (49%), Gaps = 7/315 (2%)

Query: 161  SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQ 220
            SA   +Q++  E     V   G++++ G  ++   G   T+  +  P L+E+++ V  K+
Sbjct: 4025 SALRPIQLAGGEQTLFAVTADGKIYSTGYGAAGRLGIGGTDS-VMIPTLLESIQHVFIKK 4083

Query: 221  V--TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGP 278
            V  ++G      L+  GHV++ G    G+LGHG+ +    PK I  L  V  +V IA G 
Sbjct: 4084 VAVSSGGKHCIALSSEGHVYSWGEGDDGKLGHGNKVSYDRPKLIEDLLGV-EIVDIACGG 4142

Query: 279  SYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
             +  A+T  G +Y++G G    LGHG+  D+L+P+ ++  +   +  V   +GD   + +
Sbjct: 4143 HHSAAITSAGWLYTWGKGRYGRLGHGDSDDQLRPKVVEALQDYKVIDVACGSGDAQTLCV 4202

Query: 339  DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYG 398
                 V++WG G  G LG G      +P  + SL     V+V    + +  L  +G+VY 
Sbjct: 4203 TDDDNVWSWGDGDYGKLGRGGSDGCKVPLKIDSLAGLGVVKVECGSQFSVALTRSGAVYT 4262

Query: 399  FGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNE 458
            +G   +  LG    G  D V RPR + +L+   +  I+TG  H V  +D+G +F +GDN+
Sbjct: 4263 WGKGDYHRLG---HGTDDHVRRPRKVAALQGKKIISIATGSLHCVACSDKGEVFTWGDND 4319

Query: 459  RAQLGHDTLRGCLEP 473
              QLG  T      P
Sbjct: 4320 EGQLGDGTTSALHRP 4334



 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 95/298 (31%), Positives = 145/298 (48%), Gaps = 9/298 (3%)

Query: 180  QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 239
            Q   V+  G N     G    ++ I  P   E L  +    +  G      ++  G ++ 
Sbjct: 3010 QQSAVYVWGLNDKDQLGGLKGSK-IKLPVYSETLSKLKPIHIAGGSKTLFIVSQEGKLYA 3068

Query: 240  CGSNTHGQLGHGDTLDRPTPKSIAPLEE-VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
            CG  T+G+LG GD  +   PK+I  L + V   V + +G  + LA+T +G V+S+G G +
Sbjct: 3069 CGEGTNGRLGLGDDNNMCEPKAIPFLSQFVIKKVAVHSGGKHALALTQDGKVFSWGEGED 3128

Query: 299  FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 358
              LGHG      +P+ I+  + K I    ++ G  H  A+ S+G +YTWG G  G LGHG
Sbjct: 3129 GKLGHGNCISLDKPKLIEVLKSKRIR--DIACGSGHSAAIASNGELYTWGLGEYGRLGHG 3186

Query: 359  DEIDKTLPEPLSSLKSHLAVQVC--ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSD 416
            D I +T P+ + +L  H  VQV   +R  +T  L   G VY +G   FG LG   RG SD
Sbjct: 3187 DTITQTRPKLVQALIGHRVVQVACGSRDAQTMALTTDGYVYSWGDGDFGKLG---RGGSD 3243

Query: 417  KVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPT 474
                P ++D L    V Q+  G   ++ +T  G ++ +G  +  +LGH       +PT
Sbjct: 3244 GCYTPLLVDRLNNLGVIQVECGAQFSLALTKYGEVWTWGKGDYFRLGHGNDHHVRKPT 3301



 Score =  122 bits (307), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 90/311 (28%), Positives = 150/311 (48%), Gaps = 13/311 (4%)

Query: 177  FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT--AGLNFTGFLTIR 234
             V Q G+++ CG+ ++   G  D N  +  P+ +  L     K+V   +G      LT  
Sbjct: 3059 IVSQEGKLYACGEGTNGRLGLGDDNN-MCEPKAIPFLSQFVIKKVAVHSGGKHALALTQD 3117

Query: 235  GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 294
            G V + G    G+LGHG+ +    PK I  L+    +  IA G  +  A+  NG +Y++G
Sbjct: 3118 GKVFSWGEGEDGKLGHGNCISLDKPKLIEVLKS-KRIRDIACGSGHSAAIASNGELYTWG 3176

Query: 295  SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEHVVALDSSGYVYTWGKGYC 352
             G    LGHG+   + +P+ +Q     G  VV+V+ G  D   +AL + GYVY+WG G  
Sbjct: 3177 LGEYGRLGHGDTITQTRPKLVQAL--IGHRVVQVACGSRDAQTMALTTDGYVYSWGDGDF 3234

Query: 353  GALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDR 412
            G LG G       P  +  L +   +QV    + +  L   G V+ +G   +  LG    
Sbjct: 3235 GKLGRGGSDGCYTPLLVDRLNNLGVIQVECGAQFSLALTKYGEVWTWGKGDYFRLG---H 3291

Query: 413  GVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLE 472
            G    V +P +++ LR   +  ++ G  H + VTD G+++ +GDN+  Q G+ T     +
Sbjct: 3292 GNDHHVRKPTLVEGLRGKKIIHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNGTTSVNRK 3351

Query: 473  PTEIFIQEMEE 483
            P+   + ++E+
Sbjct: 3352 PS--LVHDLED 3360



 Score =  119 bits (298), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 78/246 (31%), Positives = 129/246 (52%), Gaps = 10/246 (4%)

Query: 235  GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSV--VQIAAGPSYMLAVTGNGVVYS 292
            G ++  G N  GQLG    L+ P  K  AP E + ++  +Q+A G   + AVT +G +YS
Sbjct: 3994 GAIYGWGHNHRGQLGG---LEGPKVKLPAPCESLSALRPIQLAGGEQTLFAVTADGKIYS 4050

Query: 293  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 352
             G G+   LG G     + P  +++ +   I  V VS+G +H +AL S G+VY+WG+G  
Sbjct: 4051 TGYGAAGRLGIGGTDSVMIPTLLESIQHVFIKKVAVSSGGKHCIALSSEGHVYSWGEGDD 4110

Query: 353  GALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDR 412
            G LGHG+++    P+ +  L     V +      +  +   G +Y +G   +G LG  D 
Sbjct: 4111 GKLGHGNKVSYDRPKLIEDLLGVEIVDIACGGHHSAAITSAGWLYTWGKGRYGRLGHGD- 4169

Query: 413  GVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGC 470
              SD  LRP+++++L+ + V  ++  +G   T+ VTD   ++ +GD +  +LG     GC
Sbjct: 4170 --SDDQLRPKVVEALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRGGSDGC 4227

Query: 471  LEPTEI 476
              P +I
Sbjct: 4228 KVPLKI 4233



 Score =  119 bits (297), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 95/325 (29%), Positives = 154/325 (47%), Gaps = 16/325 (4%)

Query: 125  LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHV----VQVSASENHAAFVLQ 180
            + ++  ++S G    G LG G   T  V    +   S  HV    V VS+   H   +  
Sbjct: 4042 VTADGKIYSTGYGAAGRLGIG--GTDSVMIPTL-LESIQHVFIKKVAVSSGGKHCIALSS 4098

Query: 181  SGQVFTCGDNSSFCCGHRDTNRPIF-RPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 239
             G V++ G+      GH   N+  + RP+L+E L GV    +  G + +  +T  G ++T
Sbjct: 4099 EGHVYSWGEGDDGKLGH--GNKVSYDRPKLIEDLLGVEIVDIACGGHHSAAITSAGWLYT 4156

Query: 240  CGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSV-VQIAAGPSYMLAVTGNGVVYSFGSGSN 298
             G   +G+LGHGD+ D+  PK +  L++   + V   +G +  L VT +  V+S+G G  
Sbjct: 4157 WGKGRYGRLGHGDSDDQLRPKVVEALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDY 4216

Query: 299  FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 358
              LG G       P  I +    G+ VV+V  G +  VAL  SG VYTWGKG    LGHG
Sbjct: 4217 GKLGRGGSDGCKVPLKIDSL--AGLGVVKVECGSQFSVALTRSGAVYTWGKGDYHRLGHG 4274

Query: 359  DEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKV 418
             +     P  +++L+    + +           D G V+ +G    G LG    G +  +
Sbjct: 4275 TDDHVRRPRKVAALQGKKIISIATGSLHCVACSDKGEVFTWGDNDEGQLG---DGTTSAL 4331

Query: 419  LRPRILDSLRAHHVSQISTGLYHTV 443
             RPR++ +L+   +++++ G  HT+
Sbjct: 4332 HRPRLVHALQGKKITRVACGSAHTL 4356



 Score =  118 bits (296), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 92/318 (28%), Positives = 149/318 (46%), Gaps = 14/318 (4%)

Query: 131  VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE--NHAAFVLQSGQVFTCG 188
            +++CG    G LG G +   C     I F S   + +V+      HA  + Q G+VF+ G
Sbjct: 3066 LYACGEGTNGRLGLGDDNNMC-EPKAIPFLSQFVIKKVAVHSGGKHALALTQDGKVFSWG 3124

Query: 189  DNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQL 248
            +      GH +    + +P+L+E LK    + +  G   +  +   G ++T G   +G+L
Sbjct: 3125 EGEDGKLGHGNCIS-LDKPKLIEVLKSKRIRDIACGSGHSAAIASNGELYTWGLGEYGRL 3183

Query: 249  GHGDTLDRPTPKSIAPLEEVG-SVVQIAAGP--SYMLAVTGNGVVYSFGSGSNFCLGHGE 305
            GHGDT+ +  PK +  L  +G  VVQ+A G   +  +A+T +G VYS+G G    LG G 
Sbjct: 3184 GHGDTITQTRPKLVQAL--IGHRVVQVACGSRDAQTMALTTDGYVYSWGDGDFGKLGRGG 3241

Query: 306  QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTL 365
                  P  +   R   + V++V  G +  +AL   G V+TWGKG    LGHG++     
Sbjct: 3242 SDGCYTPLLVD--RLNNLGVIQVECGAQFSLALTKYGEVWTWGKGDYFRLGHGNDHHVRK 3299

Query: 366  PEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILD 425
            P  +  L+    + V         + DTG VY +G    G  G    G +    +P ++ 
Sbjct: 3300 PTLVEGLRGKKIIHVAVGALHCLAVTDTGQVYAWGDNDHGQQG---NGTTSVNRKPSLVH 3356

Query: 426  SLRAHHVSQISTGLYHTV 443
             L    V+++S G  H++
Sbjct: 3357 DLEDARVNRVSCGSSHSI 3374



 Score =  112 bits (281), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 73/232 (31%), Positives = 118/232 (50%), Gaps = 4/232 (1%)

Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 290
           LT  G V++ G+   G+LGHGDT+    PK I  L E  +++ IA G +Y  A++ NG +
Sbjct: 583 LTQDGCVYSWGNGDGGRLGHGDTISYDEPKLIEALLE-KNIIFIACGSTYSAALSANGEL 641

Query: 291 YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKG 350
           Y++G G+   LGHG   D + P  + T +   +  V   +GD   + + +SG V++WG G
Sbjct: 642 YTWGRGNYGRLGHGNFDDVMTPTLVTTLKGHTVVHVACGSGDSQTLCVTASGIVFSWGDG 701

Query: 351 YCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFP 410
             G LG G       P+ +  L     V+V    + +  L   G VY +G      LG  
Sbjct: 702 DYGKLGRGGTDGSKTPKIVDKLLDINVVKVFCGSQFSAALTAHGEVYTWGKGDAYRLG-- 759

Query: 411 DRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQL 462
             G  + V  P++++SLR   V  +S G  H + +T+   ++G+G N+  Q+
Sbjct: 760 -HGSEEHVRYPKVIESLRDRKVKDLSVGTTHILALTEDQFVYGWGRNDYGQI 810



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 93/314 (29%), Positives = 140/314 (44%), Gaps = 27/314 (8%)

Query: 119  GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTR---INFPSAAHVVQVSASENHA 175
            G++   L  +  VFS G    G LGHG     C+S  +   I    +  +  ++    H+
Sbjct: 3108 GKHALALTQDGKVFSWGEGEDGKLGHG----NCISLDKPKLIEVLKSKRIRDIACGSGHS 3163

Query: 176  AFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN--FTGFLTI 233
            A +  +G+++T G       GH DT     RP+LV+AL G    QV  G     T  LT 
Sbjct: 3164 AAIASNGELYTWGLGEYGRLGHGDTITQT-RPKLVQALIGHRVVQVACGSRDAQTMALTT 3222

Query: 234  RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
             G+V++ G    G+LG G +    TP  +  L  +G V+Q+  G  + LA+T  G V+++
Sbjct: 3223 DGYVYSWGDGDFGKLGRGGSDGCYTPLLVDRLNNLG-VIQVECGAQFSLALTKYGEVWTW 3281

Query: 294  GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 353
            G G  F LGHG  H   +P  ++  R  G  ++ V+ G  H +A+  +G VY WG    G
Sbjct: 3282 GKGDYFRLGHGNDHHVRKPTLVEGLR--GKKIIHVAVGALHCLAVTDTGQVYAWGDNDHG 3339

Query: 354  ALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRG 413
              G+G       P  +  L+        AR  +    V  GS +   W+       P  G
Sbjct: 3340 QQGNGTTSVNRKPSLVHDLED-------ARVNR----VSCGSSHSIAWVLVDQ---PSNG 3385

Query: 414  VSDKVLRPRILDSL 427
              D V  P + D L
Sbjct: 3386 NQDPVTFPTVRDPL 3399



 Score =  102 bits (255), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 80/271 (29%), Positives = 126/271 (46%), Gaps = 9/271 (3%)

Query: 170 ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
           A   H   + Q G V++ G+      GH DT      P+L+EAL       +  G  ++ 
Sbjct: 575 ADGKHYLALTQDGCVYSWGNGDGGRLGHGDTIS-YDEPKLIEALLEKNIIFIACGSTYSA 633

Query: 230 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA--AGPSYMLAVTGN 287
            L+  G ++T G   +G+LGHG+  D  TP  +  L+   +VV +A  +G S  L VT +
Sbjct: 634 ALSANGELYTWGRGNYGRLGHGNFDDVMTPTLVTTLKG-HTVVHVACGSGDSQTLCVTAS 692

Query: 288 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 347
           G+V+S+G G    LG G       P+ +       I+VV+V  G +   AL + G VYTW
Sbjct: 693 GIVFSWGDGDYGKLGRGGTDGSKTPKIVDKLL--DINVVKVFCGSQFSAALTAHGEVYTW 750

Query: 348 GKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSL 407
           GKG    LGHG E     P+ + SL+      +         L +   VYG+G   +G +
Sbjct: 751 GKGDAYRLGHGSEEHVRYPKVIESLRDRKVKDLSVGTTHILALTEDQFVYGWGRNDYGQI 810

Query: 408 GFPDRGVSDKVLRPRILDSLRAHHVSQISTG 438
              D  +   +  P +  +L +  V  +++G
Sbjct: 811 ---DPTLGPIISEPTLCPTLSSKTVIGLASG 838



 Score = 95.1 bits (235), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 79/289 (27%), Positives = 137/289 (47%), Gaps = 26/289 (8%)

Query: 119 GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSA---AHVVQVSASENHA 175
           G+++  L  +  V+S G+   G LGHG      +S+       A    +++ ++    ++
Sbjct: 577 GKHYLALTQDGCVYSWGNGDGGRLGHG----DTISYDEPKLIEALLEKNIIFIACGSTYS 632

Query: 176 AFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT--AGLNFTGFLTI 233
           A +  +G+++T G  +    GH + +  +  P LV  LKG     V   +G + T  +T 
Sbjct: 633 AALSANGELYTWGRGNYGRLGHGNFDD-VMTPTLVTTLKGHTVVHVACGSGDSQTLCVTA 691

Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
            G V + G   +G+LG G T    TPK +  L ++ +VV++  G  +  A+T +G VY++
Sbjct: 692 SGIVFSWGDGDYGKLGRGGTDGSKTPKIVDKLLDI-NVVKVFCGSQFSAALTAHGEVYTW 750

Query: 294 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 353
           G G  + LGHG +     P+ I++ R +   V  +S G  H++AL    +VY WG+   G
Sbjct: 751 GKGDAYRLGHGSEEHVRYPKVIESLRDR--KVKDLSVGTTHILALTEDQFVYGWGRNDYG 808

Query: 354 ALGHGDEIDKTLPEPLSSLKSHLAVQVCAR-KRKTFVLVDTGSVYGFGW 401
                 +ID TL   +S         +C     KT + + +G    F W
Sbjct: 809 ------QIDPTLGPIISE------PTLCPTLSSKTVIGLASGPTQSFAW 845



 Score = 94.7 bits (234), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 80/269 (29%), Positives = 126/269 (46%), Gaps = 20/269 (7%)

Query: 96   FLQSVEHS-SDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSF 154
             L+S++H     V  S+G      G++   L S   V+S G    G LGHG +    VS+
Sbjct: 4072 LLESIQHVFIKKVAVSSG------GKHCIALSSEGHVYSWGEGDDGKLGHGNK----VSY 4121

Query: 155  TR---INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVE 211
             R   I       +V ++   +H+A +  +G ++T G       GH D++  + RP++VE
Sbjct: 4122 DRPKLIEDLLGVEIVDIACGGHHSAAITSAGWLYTWGKGRYGRLGHGDSDDQL-RPKVVE 4180

Query: 212  ALKGVPCKQVTAGLNFTGFL--TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG 269
            AL+      V  G      L  T   +V + G   +G+LG G +     P  I  L  +G
Sbjct: 4181 ALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRGGSDGCKVPLKIDSLAGLG 4240

Query: 270  SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS 329
             VV++  G  + +A+T +G VY++G G    LGHG      +PR +     +G  ++ ++
Sbjct: 4241 -VVKVECGSQFSVALTRSGAVYTWGKGDYHRLGHGTDDHVRRPRKVAAL--QGKKIISIA 4297

Query: 330  AGDEHVVALDSSGYVYTWGKGYCGALGHG 358
             G  H VA    G V+TWG    G LG G
Sbjct: 4298 TGSLHCVACSDKGEVFTWGDNDEGQLGDG 4326



 Score = 78.2 bits (191), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 60/218 (27%), Positives = 99/218 (45%), Gaps = 16/218 (7%)

Query: 258 TPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQT 317
           TP     + E+G + Q+      ++ ++ NG VY+   GS          +   P+ +  
Sbjct: 514 TPFYCDAIAELG-IKQLCCTERALMILSLNGNVYNMYHGS----------ETQYPQRVHG 562

Query: 318 FRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLA 377
           F  K I ++   A  +H +AL   G VY+WG G  G LGHGD I    P+ + +L     
Sbjct: 563 FSDKPITMIASHADGKHYLALTQDGCVYSWGNGDGGRLGHGDTISYDEPKLIEALLEKNI 622

Query: 378 VQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS- 436
           + +      +  L   G +Y +G   +G LG    G  D V+ P ++ +L+ H V  ++ 
Sbjct: 623 IFIACGSTYSAALSANGELYTWGRGNYGRLG---HGNFDDVMTPTLVTTLKGHTVVHVAC 679

Query: 437 -TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEP 473
            +G   T+ VT  G +F +GD +  +LG     G   P
Sbjct: 680 GSGDSQTLCVTASGIVFSWGDGDYGKLGRGGTDGSKTP 717



 Score = 65.1 bits (157), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 36/135 (26%), Positives = 70/135 (51%), Gaps = 5/135 (3%)

Query: 332  DEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 391
            ++  ++ D SG +Y WG  + G LG  +     LP P  SL +   +Q+   ++  F + 
Sbjct: 3984 EDWTLSWDGSGAIYGWGHNHRGQLGGLEGPKVKLPAPCESLSALRPIQLAGGEQTLFAVT 4043

Query: 392  DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQ--ISTGLYHTVVVTDRG 449
              G +Y  G+   G LG    G +D V+ P +L+S++   + +  +S+G  H + ++  G
Sbjct: 4044 ADGKIYSTGYGAAGRLGI---GGTDSVMIPTLLESIQHVFIKKVAVSSGGKHCIALSSEG 4100

Query: 450  RLFGFGDNERAQLGH 464
             ++ +G+ +  +LGH
Sbjct: 4101 HVYSWGEGDDGKLGH 4115


>gi|307204521|gb|EFN83201.1| Probable E3 ubiquitin-protein ligase HERC2 [Harpegnathos saltator]
          Length = 4791

 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 93/315 (29%), Positives = 155/315 (49%), Gaps = 7/315 (2%)

Query: 161  SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQ 220
            SA   +Q++  E     V   G+V++ G  ++   G   T+  +  P L+E+++ V  K+
Sbjct: 3963 SALRPIQLAGGEQTLFAVTADGKVYSTGYGAAGRLGIGGTDS-VMVPTLLESIQHVFIKK 4021

Query: 221  V--TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGP 278
            V   +G      L+  GHV++ G    G+LGHG+ L    PK +  L  +  +V IA G 
Sbjct: 4022 VAVNSGGKHCLALSSEGHVYSWGEGDDGKLGHGNRLSYDRPKLVEDLLGI-EIVDIACGG 4080

Query: 279  SYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
             +  A+T  G +Y++G G    LGHG+  D+L+P+ ++  +   +  V   +GD   + +
Sbjct: 4081 HHSAAITSAGWLYTWGKGRYGRLGHGDSDDQLRPKVVEALQDYKVIDVACGSGDAQTLCV 4140

Query: 339  DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYG 398
                 V++WG G  G LG G      +P  + SL     ++V    + +  L  +G+VY 
Sbjct: 4141 TDDDNVWSWGDGDYGKLGRGGSDGCKVPLKIDSLAGLGVIKVECGSQFSVALTRSGAVYT 4200

Query: 399  FGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNE 458
            +G   +  LG    G  D V RPR + +L+   +  I+TG  H V  +D+G +F +GDN+
Sbjct: 4201 WGKGDYHRLG---HGTDDHVRRPRKVAALQGKKIISIATGSLHCVACSDKGEVFTWGDND 4257

Query: 459  RAQLGHDTLRGCLEP 473
              QLG  T      P
Sbjct: 4258 EGQLGDGTTSALQRP 4272



 Score =  125 bits (313), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 149/311 (47%), Gaps = 10/311 (3%)

Query: 167  QVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN 226
            QV+A  +  A   QS  V+  G N     G    ++ I  P   E L  +    +  G  
Sbjct: 2937 QVTAQRSTDAPPQQSA-VYVWGLNDKDQLGGLKGSK-IKIPVRSEVLSKLKPIHIAGGSK 2994

Query: 227  FTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEE-VGSVVQIAAGPSYMLAVT 285
                ++  G ++ CG  T+G+LG GD  +   PK I  L + V   V + +G  + LA+T
Sbjct: 2995 TLFIVSQEGKLYACGEGTNGRLGLGDDYNMCEPKLIPFLSQYVIKKVAVHSGGKHALALT 3054

Query: 286  GNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVY 345
             +G V+S+G G +  LGHG      +PR I++ + K I    ++ G  H  A+ S+G +Y
Sbjct: 3055 QDGKVFSWGEGEDGKLGHGNCTTLDKPRLIESLKSKRIR--DIACGSGHSAAIASNGELY 3112

Query: 346  TWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVC--ARKRKTFVLVDTGSVYGFGWMG 403
            TWG G  G LGHGD   +  P+ + +L     VQV   +R  +T  L   G VY +G   
Sbjct: 3113 TWGLGEYGRLGHGDTATQMKPKLVQALSGQRVVQVACGSRDAQTMSLTADGCVYTWGDGD 3172

Query: 404  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 463
            FG LG   RG SD    P ++D L    V Q+  G   ++ +T  G ++ +G  +  +LG
Sbjct: 3173 FGKLG---RGGSDGCYTPLLVDRLNGLGVVQVECGAQFSLALTKYGEVWTWGKGDYFRLG 3229

Query: 464  HDTLRGCLEPT 474
            H       +PT
Sbjct: 3230 HGNDHHVRKPT 3240



 Score =  119 bits (299), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 93/324 (28%), Positives = 154/324 (47%), Gaps = 21/324 (6%)

Query: 155  TRINFPSAAHV------VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPR 208
            ++I  P  + V      + ++        V Q G+++ CG+ ++   G  D +  +  P+
Sbjct: 2970 SKIKIPVRSEVLSKLKPIHIAGGSKTLFIVSQEGKLYACGEGTNGRLGLGD-DYNMCEPK 3028

Query: 209  LVEALKGVPCKQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGD--TLDRPTPKSIAP 264
            L+  L     K+V   +G      LT  G V + G    G+LGHG+  TLD+P  + I  
Sbjct: 3029 LIPFLSQYVIKKVAVHSGGKHALALTQDGKVFSWGEGEDGKLGHGNCTTLDKP--RLIES 3086

Query: 265  LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH 324
            L+    +  IA G  +  A+  NG +Y++G G    LGHG+   +++P+ +Q     G  
Sbjct: 3087 LKS-KRIRDIACGSGHSAAIASNGELYTWGLGEYGRLGHGDTATQMKPKLVQAL--SGQR 3143

Query: 325  VVRVSAG--DEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCA 382
            VV+V+ G  D   ++L + G VYTWG G  G LG G       P  +  L     VQV  
Sbjct: 3144 VVQVACGSRDAQTMSLTADGCVYTWGDGDFGKLGRGGSDGCYTPLLVDRLNGLGVVQVEC 3203

Query: 383  RKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHT 442
              + +  L   G V+ +G   +  LG    G    V +P +++ LR   +  ++ G  H 
Sbjct: 3204 GAQFSLALTKYGEVWTWGKGDYFRLG---HGNDHHVRKPTLVEGLRGKKIVHVAVGALHC 3260

Query: 443  VVVTDRGRLFGFGDNERAQLGHDT 466
            + VTD G+++ +GDN+  Q G+ T
Sbjct: 3261 LAVTDTGQVYAWGDNDHGQQGNGT 3284



 Score =  119 bits (297), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 94/325 (28%), Positives = 153/325 (47%), Gaps = 16/325 (4%)

Query: 125  LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHV----VQVSASENHAAFVLQ 180
            + ++  V+S G    G LG G   +  V        S  HV    V V++   H   +  
Sbjct: 3980 VTADGKVYSTGYGAAGRLGIGGTDSVMVPTL---LESIQHVFIKKVAVNSGGKHCLALSS 4036

Query: 181  SGQVFTCGDNSSFCCGHRDTNRPIF-RPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 239
             G V++ G+      GH   NR  + RP+LVE L G+    +  G + +  +T  G ++T
Sbjct: 4037 EGHVYSWGEGDDGKLGH--GNRLSYDRPKLVEDLLGIEIVDIACGGHHSAAITSAGWLYT 4094

Query: 240  CGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSV-VQIAAGPSYMLAVTGNGVVYSFGSGSN 298
             G   +G+LGHGD+ D+  PK +  L++   + V   +G +  L VT +  V+S+G G  
Sbjct: 4095 WGKGRYGRLGHGDSDDQLRPKVVEALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDY 4154

Query: 299  FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 358
              LG G       P  I +    G+ V++V  G +  VAL  SG VYTWGKG    LGHG
Sbjct: 4155 GKLGRGGSDGCKVPLKIDSL--AGLGVIKVECGSQFSVALTRSGAVYTWGKGDYHRLGHG 4212

Query: 359  DEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKV 418
             +     P  +++L+    + +           D G V+ +G    G LG    G +  +
Sbjct: 4213 TDDHVRRPRKVAALQGKKIISIATGSLHCVACSDKGEVFTWGDNDEGQLG---DGTTSAL 4269

Query: 419  LRPRILDSLRAHHVSQISTGLYHTV 443
             RPR++ +L+   +++++ G  HT+
Sbjct: 4270 QRPRLVHALQGKKITRVACGSAHTL 4294



 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 92/317 (29%), Positives = 148/317 (46%), Gaps = 12/317 (3%)

Query: 131  VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE--NHAAFVLQSGQVFTCG 188
            +++CG    G LG G +   C     I F S   + +V+      HA  + Q G+VF+ G
Sbjct: 3005 LYACGEGTNGRLGLGDDYNMC-EPKLIPFLSQYVIKKVAVHSGGKHALALTQDGKVFSWG 3063

Query: 189  DNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQL 248
            +      GH +    + +PRL+E+LK    + +  G   +  +   G ++T G   +G+L
Sbjct: 3064 EGEDGKLGHGNCTT-LDKPRLIESLKSKRIRDIACGSGHSAAIASNGELYTWGLGEYGRL 3122

Query: 249  GHGDTLDRPTPKSIAPLEEVGSVVQIAAGP--SYMLAVTGNGVVYSFGSGSNFCLGHGEQ 306
            GHGDT  +  PK +  L     VVQ+A G   +  +++T +G VY++G G    LG G  
Sbjct: 3123 GHGDTATQMKPKLVQALSG-QRVVQVACGSRDAQTMSLTADGCVYTWGDGDFGKLGRGGS 3181

Query: 307  HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP 366
                 P  +   R  G+ VV+V  G +  +AL   G V+TWGKG    LGHG++     P
Sbjct: 3182 DGCYTPLLVD--RLNGLGVVQVECGAQFSLALTKYGEVWTWGKGDYFRLGHGNDHHVRKP 3239

Query: 367  EPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDS 426
              +  L+    V V         + DTG VY +G    G  G    G +    +P ++  
Sbjct: 3240 TLVEGLRGKKIVHVAVGALHCLAVTDTGQVYAWGDNDHGQQG---NGTTIVNRKPSLVHE 3296

Query: 427  LRAHHVSQISTGLYHTV 443
            L    ++++S G  H++
Sbjct: 3297 LDDTRMNRVSCGSSHSI 3313



 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 77/247 (31%), Positives = 127/247 (51%), Gaps = 12/247 (4%)

Query: 235  GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
            G ++  G N  GQLG   G  +  P P +S++ L  +    Q+A G   + AVT +G VY
Sbjct: 3932 GAIYGWGHNHRGQLGGLEGAKIKLPAPCESLSALRPI----QLAGGEQTLFAVTADGKVY 3987

Query: 292  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 351
            S G G+   LG G     + P  +++ +   I  V V++G +H +AL S G+VY+WG+G 
Sbjct: 3988 STGYGAAGRLGIGGTDSVMVPTLLESIQHVFIKKVAVNSGGKHCLALSSEGHVYSWGEGD 4047

Query: 352  CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 411
             G LGHG+ +    P+ +  L     V +      +  +   G +Y +G   +G LG  D
Sbjct: 4048 DGKLGHGNRLSYDRPKLVEDLLGIEIVDIACGGHHSAAITSAGWLYTWGKGRYGRLGHGD 4107

Query: 412  RGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG 469
               SD  LRP+++++L+ + V  ++  +G   T+ VTD   ++ +GD +  +LG     G
Sbjct: 4108 ---SDDQLRPKVVEALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRGGSDG 4164

Query: 470  CLEPTEI 476
            C  P +I
Sbjct: 4165 CKVPLKI 4171



 Score =  108 bits (271), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 65/187 (34%), Positives = 105/187 (56%), Gaps = 7/187 (3%)

Query: 280 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 339
           + LA+T +G VYS+G+G    LGHG+     +P+ I+T   K I  + ++ G  +  AL 
Sbjct: 520 HYLALTQDGCVYSWGNGDGGRLGHGDNISHDEPKLIETLLEKNI--IFIACGSTYSAALS 577

Query: 340 SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVC--ARKRKTFVLVDTGSVY 397
           +SG +YTWG+G  G LGHG   D T+P  +++LK H+ V V   +   +T  +  +G V+
Sbjct: 578 ASGELYTWGRGNYGRLGHGSNDDVTVPTLVTTLKGHMVVHVACGSGDSQTLCVTASGIVF 637

Query: 398 GFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDN 457
            +G   +G LG   RG SD    P+I+D L   +V ++  G   +  +T RG ++ +G  
Sbjct: 638 SWGDGDYGKLG---RGGSDGSKTPKIVDKLLDINVVRVFCGGQFSAALTARGEVYTWGKG 694

Query: 458 ERAQLGH 464
           +  +LGH
Sbjct: 695 DAYRLGH 701



 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 81/253 (32%), Positives = 120/253 (47%), Gaps = 13/253 (5%)

Query: 119  GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTR---INFPSAAHVVQVSASENHA 175
            G++   L  +  VFS G    G LGHG     C +  +   I    +  +  ++    H+
Sbjct: 3047 GKHALALTQDGKVFSWGEGEDGKLGHG----NCTTLDKPRLIESLKSKRIRDIACGSGHS 3102

Query: 176  AFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN--FTGFLTI 233
            A +  +G+++T G       GH DT   + +P+LV+AL G    QV  G     T  LT 
Sbjct: 3103 AAIASNGELYTWGLGEYGRLGHGDTATQM-KPKLVQALSGQRVVQVACGSRDAQTMSLTA 3161

Query: 234  RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
             G V+T G    G+LG G +    TP  +  L  +G VVQ+  G  + LA+T  G V+++
Sbjct: 3162 DGCVYTWGDGDFGKLGRGGSDGCYTPLLVDRLNGLG-VVQVECGAQFSLALTKYGEVWTW 3220

Query: 294  GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 353
            G G  F LGHG  H   +P  ++  R  G  +V V+ G  H +A+  +G VY WG    G
Sbjct: 3221 GKGDYFRLGHGNDHHVRKPTLVEGLR--GKKIVHVAVGALHCLAVTDTGQVYAWGDNDHG 3278

Query: 354  ALGHGDEIDKTLP 366
              G+G  I    P
Sbjct: 3279 QQGNGTTIVNRKP 3291



 Score =  105 bits (261), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 74/234 (31%), Positives = 119/234 (50%), Gaps = 8/234 (3%)

Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 290
           LT  G V++ G+   G+LGHGD +    PK I  L E  +++ IA G +Y  A++ +G +
Sbjct: 524 LTQDGCVYSWGNGDGGRLGHGDNISHDEPKLIETLLE-KNIIFIACGSTYSAALSASGEL 582

Query: 291 YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS--AGDEHVVALDSSGYVYTWG 348
           Y++G G+   LGHG   D   P  + T   KG  VV V+  +GD   + + +SG V++WG
Sbjct: 583 YTWGRGNYGRLGHGSNDDVTVPTLVTTL--KGHMVVHVACGSGDSQTLCVTASGIVFSWG 640

Query: 349 KGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLG 408
            G  G LG G       P+ +  L     V+V    + +  L   G VY +G      LG
Sbjct: 641 DGDYGKLGRGGSDGSKTPKIVDKLLDINVVRVFCGGQFSAALTARGEVYTWGKGDAYRLG 700

Query: 409 FPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQL 462
               G  + V  P++++SLR   +  +S G  H + +T+   ++G+G N+  Q+
Sbjct: 701 ---HGNEEHVRYPKLIESLRDKKIKDLSVGGTHILALTEDQFVYGWGRNDYGQI 751



 Score = 99.8 bits (247), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 79/268 (29%), Positives = 123/268 (45%), Gaps = 9/268 (3%)

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            H   + Q G V++ G+      GH D N     P+L+E L       +  G  ++  L+
Sbjct: 519 KHYLALTQDGCVYSWGNGDGGRLGHGD-NISHDEPKLIETLLEKNIIFIACGSTYSAALS 577

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA--AGPSYMLAVTGNGVV 290
             G ++T G   +G+LGHG   D   P  +  L+    VV +A  +G S  L VT +G+V
Sbjct: 578 ASGELYTWGRGNYGRLGHGSNDDVTVPTLVTTLKG-HMVVHVACGSGDSQTLCVTASGIV 636

Query: 291 YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKG 350
           +S+G G    LG G       P+ +       I+VVRV  G +   AL + G VYTWGKG
Sbjct: 637 FSWGDGDYGKLGRGGSDGSKTPKIVDKLL--DINVVRVFCGGQFSAALTARGEVYTWGKG 694

Query: 351 YCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFP 410
               LGHG+E     P+ + SL+      +         L +   VYG+G   +G +   
Sbjct: 695 DAYRLGHGNEEHVRYPKLIESLRDKKIKDLSVGGTHILALTEDQFVYGWGRNDYGQI--- 751

Query: 411 DRGVSDKVLRPRILDSLRAHHVSQISTG 438
           D  +   V  P +  +L + +V  +++G
Sbjct: 752 DPTLGPVVSEPSLCPTLSSKNVIGLASG 779



 Score = 92.8 bits (229), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 75/269 (27%), Positives = 124/269 (46%), Gaps = 20/269 (7%)

Query: 96   FLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSF 154
             L+S++H           + + +G  H L +S+   V+S G    G LGHG      +S+
Sbjct: 4010 LLESIQH------VFIKKVAVNSGGKHCLALSSEGHVYSWGEGDDGKLGHGNR----LSY 4059

Query: 155  TRINFPS---AAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVE 211
             R           +V ++   +H+A +  +G ++T G       GH D++  + RP++VE
Sbjct: 4060 DRPKLVEDLLGIEIVDIACGGHHSAAITSAGWLYTWGKGRYGRLGHGDSDDQL-RPKVVE 4118

Query: 212  ALKGVPCKQVTAGLNFTGFL--TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG 269
            AL+      V  G      L  T   +V + G   +G+LG G +     P  I  L  +G
Sbjct: 4119 ALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRGGSDGCKVPLKIDSLAGLG 4178

Query: 270  SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS 329
             V+++  G  + +A+T +G VY++G G    LGHG      +PR +     +G  ++ ++
Sbjct: 4179 -VIKVECGSQFSVALTRSGAVYTWGKGDYHRLGHGTDDHVRRPRKVAAL--QGKKIISIA 4235

Query: 330  AGDEHVVALDSSGYVYTWGKGYCGALGHG 358
             G  H VA    G V+TWG    G LG G
Sbjct: 4236 TGSLHCVACSDKGEVFTWGDNDEGQLGDG 4264



 Score = 92.0 bits (227), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 73/251 (29%), Positives = 123/251 (49%), Gaps = 13/251 (5%)

Query: 117 TTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
           + G+++  L  +  V+S G+   G LGHG   +       I      +++ ++    ++A
Sbjct: 516 SDGKHYLALTQDGCVYSWGNGDGGRLGHGDNISH-DEPKLIETLLEKNIIFIACGSTYSA 574

Query: 177 FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT--AGLNFTGFLTIR 234
            +  SG+++T G  +    GH  +N  +  P LV  LKG     V   +G + T  +T  
Sbjct: 575 ALSASGELYTWGRGNYGRLGH-GSNDDVTVPTLVTTLKGHMVVHVACGSGDSQTLCVTAS 633

Query: 235 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 294
           G V + G   +G+LG G +    TPK +  L ++ +VV++  G  +  A+T  G VY++G
Sbjct: 634 GIVFSWGDGDYGKLGRGGSDGSKTPKIVDKLLDI-NVVRVFCGGQFSAALTARGEVYTWG 692

Query: 295 SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGA 354
            G  + LGHG +     P+ I++ R K I    +S G  H++AL    +VY WG+   G 
Sbjct: 693 KGDAYRLGHGNEEHVRYPKLIESLRDKKIK--DLSVGGTHILALTEDQFVYGWGRNDYG- 749

Query: 355 LGHGDEIDKTL 365
                +ID TL
Sbjct: 750 -----QIDPTL 755



 Score = 77.8 bits (190), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 50/186 (26%), Positives = 91/186 (48%), Gaps = 17/186 (9%)

Query: 281 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 340
           +L+++GN  +  +GS + +            P+ + +F  K + ++   +  +H +AL  
Sbjct: 479 ILSLSGNVYIMYYGSETQY------------PQRMHSFSDKPVTMIASHSDGKHYLALTQ 526

Query: 341 SGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 400
            G VY+WG G  G LGHGD I    P+ + +L     + +      +  L  +G +Y +G
Sbjct: 527 DGCVYSWGNGDGGRLGHGDNISHDEPKLIETLLEKNIIFIACGSTYSAALSASGELYTWG 586

Query: 401 WMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDNE 458
              +G LG    G +D V  P ++ +L+ H V  ++  +G   T+ VT  G +F +GD +
Sbjct: 587 RGNYGRLG---HGSNDDVTVPTLVTTLKGHMVVHVACGSGDSQTLCVTASGIVFSWGDGD 643

Query: 459 RAQLGH 464
             +LG 
Sbjct: 644 YGKLGR 649



 Score = 64.7 bits (156), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 41/162 (25%), Positives = 80/162 (49%), Gaps = 17/162 (10%)

Query: 305  EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKT 364
            ++HDE   + +Q   R+          ++  ++ D SG +Y WG  + G LG  +     
Sbjct: 3907 QEHDE---QLLQWLNRRP---------EDWTLSWDGSGAIYGWGHNHRGQLGGLEGAKIK 3954

Query: 365  LPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRIL 424
            LP P  SL +   +Q+   ++  F +   G VY  G+   G LG    G +D V+ P +L
Sbjct: 3955 LPAPCESLSALRPIQLAGGEQTLFAVTADGKVYSTGYGAAGRLGI---GGTDSVMVPTLL 4011

Query: 425  DSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDNERAQLGH 464
            +S++   + +++  +G  H + ++  G ++ +G+ +  +LGH
Sbjct: 4012 ESIQHVFIKKVAVNSGGKHCLALSSEGHVYSWGEGDDGKLGH 4053


>gi|328793081|ref|XP_395007.4| PREDICTED: e3 ubiquitin-protein ligase HERC2 [Apis mellifera]
          Length = 4643

 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 97/316 (30%), Positives = 154/316 (48%), Gaps = 9/316 (2%)

Query: 161  SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQ 220
            SA   VQ++  E     V   G+V+  G  +    G   T+  +  P L+E+++ V  K+
Sbjct: 3815 SALRPVQLTGGEQTLFAVTADGKVYATGYGAVGRLGIGGTDS-VMVPTLLESIQHVFVKK 3873

Query: 221  V--TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS-VVQIAAG 277
            V   +G      L+  GHV++ G    G+LGHG+ L    PK I  L  +G+ +V IA G
Sbjct: 3874 VAVNSGGKHCLALSSEGHVYSWGEGDDGKLGHGNRLSYDRPKLIEEL--LGTEIVDIACG 3931

Query: 278  PSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
              +  A+T  G +Y++G G    LGHG+  D+L P+ I+  +   +  V   +GD   + 
Sbjct: 3932 GHHSAAITSAGWLYTWGKGRYGRLGHGDSEDQLTPKLIEALQDYKVIDVACGSGDAQTLC 3991

Query: 338  LDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVY 397
            +     V++WG G  G LG G      +P  + SL     ++V    + +  L  +G++Y
Sbjct: 3992 VTDDDNVWSWGDGDYGKLGRGGSDGCKIPMKIESLAGLGVIKVECGSQFSVALTRSGAIY 4051

Query: 398  GFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDN 457
             +G   +  LG    G  D V RPR + +L+   +  I+TG  H V  TD+G +F +GDN
Sbjct: 4052 TWGKGDYHRLG---HGTDDHVRRPRKVAALQGKKIISIATGSLHCVACTDKGEVFTWGDN 4108

Query: 458  ERAQLGHDTLRGCLEP 473
            +  QLG  T      P
Sbjct: 4109 DEGQLGDGTTSALQRP 4124



 Score =  128 bits (321), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 89/274 (32%), Positives = 135/274 (49%), Gaps = 8/274 (2%)

Query: 204  IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 263
            I  P   E L  +    +  G      ++  G ++ CG  T+G+LG GD  +   PK I 
Sbjct: 2811 IKLPVYSEVLSKLKPVHIAGGSKTLFVVSQEGKLYACGEGTNGRLGLGDDSNVCEPKPIP 2870

Query: 264  PLEE-VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKG 322
             L + V   V + +G  + LA+T +G V+S+G G +  LGHG      +PR I++ + K 
Sbjct: 2871 FLSQYVIKKVAVHSGGKHALALTQDGKVFSWGEGEDGKLGHGNSISLDKPRLIESLKSKR 2930

Query: 323  IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVC- 381
            I    ++ G  H  A+ SSG +YTWG G  G LGHGD   ++ P+ + SL     +Q+  
Sbjct: 2931 IR--DIACGSGHSAAITSSGELYTWGLGEYGRLGHGDTATQSKPKLVQSLVGQRVIQIAC 2988

Query: 382  -ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLY 440
             +R  +T  L   G VY +G   FG LG   RG SD    P ++D L    V QI  G  
Sbjct: 2989 GSRDAQTMALTADGLVYSWGDGDFGKLG---RGGSDGCYTPLLIDRLNGLGVVQIECGAQ 3045

Query: 441  HTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPT 474
             ++ +T  G ++ +G  +  +LGH       +PT
Sbjct: 3046 FSLALTKYGEVWTWGKGDYFRLGHGNDHHVRKPT 3079



 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 99/325 (30%), Positives = 158/325 (48%), Gaps = 16/325 (4%)

Query: 131  VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE--NHAAFVLQSGQVFTCG 188
            +++CG    G LG G ++  C     I F S   + +V+      HA  + Q G+VF+ G
Sbjct: 2844 LYACGEGTNGRLGLGDDSNVC-EPKPIPFLSQYVIKKVAVHSGGKHALALTQDGKVFSWG 2902

Query: 189  DNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQL 248
            +      GH ++   + +PRL+E+LK    + +  G   +  +T  G ++T G   +G+L
Sbjct: 2903 EGEDGKLGHGNS-ISLDKPRLIESLKSKRIRDIACGSGHSAAITSSGELYTWGLGEYGRL 2961

Query: 249  GHGDTLDRPTPKSIAPLEEVGS-VVQIAAGP--SYMLAVTGNGVVYSFGSGSNFCLGHGE 305
            GHGDT  +  PK +  L  VG  V+QIA G   +  +A+T +G+VYS+G G    LG G 
Sbjct: 2962 GHGDTATQSKPKLVQSL--VGQRVIQIACGSRDAQTMALTADGLVYSWGDGDFGKLGRGG 3019

Query: 306  QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTL 365
                  P  I   R  G+ VV++  G +  +AL   G V+TWGKG    LGHG++     
Sbjct: 3020 SDGCYTPLLID--RLNGLGVVQIECGAQFSLALTKYGEVWTWGKGDYFRLGHGNDHHVRK 3077

Query: 366  PEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILD 425
            P  +  L+    + V         + D G VY +G    G  G    G +    +P ++ 
Sbjct: 3078 PTLVEGLRGKKIIHVAVGALHCLAVTDIGQVYAWGDNDHGQQG---NGTTIVNKKPSLVH 3134

Query: 426  SLRAHHVSQISTGLYHTV--VVTDR 448
             L    V+++S G  H++  V+TD+
Sbjct: 3135 ELDDARVNRVSCGSSHSIAWVLTDQ 3159



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 97/334 (29%), Positives = 158/334 (47%), Gaps = 18/334 (5%)

Query: 118  TGRYHTL--LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHV----VQVSAS 171
            TG   TL  + ++  V++ G    G LG G   +  V        S  HV    V V++ 
Sbjct: 3823 TGGEQTLFAVTADGKVYATGYGAVGRLGIGGTDSVMVPTL---LESIQHVFVKKVAVNSG 3879

Query: 172  ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIF-RPRLVEALKGVPCKQVTAGLNFTGF 230
              H   +   G V++ G+      GH   NR  + RP+L+E L G     +  G + +  
Sbjct: 3880 GKHCLALSSEGHVYSWGEGDDGKLGH--GNRLSYDRPKLIEELLGTEIVDIACGGHHSAA 3937

Query: 231  LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSV-VQIAAGPSYMLAVTGNGV 289
            +T  G ++T G   +G+LGHGD+ D+ TPK I  L++   + V   +G +  L VT +  
Sbjct: 3938 ITSAGWLYTWGKGRYGRLGHGDSEDQLTPKLIEALQDYKVIDVACGSGDAQTLCVTDDDN 3997

Query: 290  VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 349
            V+S+G G    LG G       P  I++    G+ V++V  G +  VAL  SG +YTWGK
Sbjct: 3998 VWSWGDGDYGKLGRGGSDGCKIPMKIESL--AGLGVIKVECGSQFSVALTRSGAIYTWGK 4055

Query: 350  GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGF 409
            G    LGHG +     P  +++L+    + +           D G V+ +G    G LG 
Sbjct: 4056 GDYHRLGHGTDDHVRRPRKVAALQGKKIISIATGSLHCVACTDKGEVFTWGDNDEGQLG- 4114

Query: 410  PDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV 443
               G +  + RPR++ +L+   +++++ G  HT+
Sbjct: 4115 --DGTTSALQRPRLVHALQGKKITRVACGSAHTL 4146



 Score =  116 bits (290), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 87/322 (27%), Positives = 152/322 (47%), Gaps = 17/322 (5%)

Query: 155  TRINFPSAAHV------VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPR 208
            ++I  P  + V      V ++        V Q G+++ CG+ ++   G  D +  +  P+
Sbjct: 2809 SKIKLPVYSEVLSKLKPVHIAGGSKTLFVVSQEGKLYACGEGTNGRLGLGDDSN-VCEPK 2867

Query: 209  LVEALKGVPCKQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 266
             +  L     K+V   +G      LT  G V + G    G+LGHG+++    P+ I  L+
Sbjct: 2868 PIPFLSQYVIKKVAVHSGGKHALALTQDGKVFSWGEGEDGKLGHGNSISLDKPRLIESLK 2927

Query: 267  EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVV 326
                +  IA G  +  A+T +G +Y++G G    LGHG+   + +P+ +Q+    G  V+
Sbjct: 2928 S-KRIRDIACGSGHSAAITSSGELYTWGLGEYGRLGHGDTATQSKPKLVQSL--VGQRVI 2984

Query: 327  RVSAG--DEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARK 384
            +++ G  D   +AL + G VY+WG G  G LG G       P  +  L     VQ+    
Sbjct: 2985 QIACGSRDAQTMALTADGLVYSWGDGDFGKLGRGGSDGCYTPLLIDRLNGLGVVQIECGA 3044

Query: 385  RKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV 444
            + +  L   G V+ +G   +  LG    G    V +P +++ LR   +  ++ G  H + 
Sbjct: 3045 QFSLALTKYGEVWTWGKGDYFRLG---HGNDHHVRKPTLVEGLRGKKIIHVAVGALHCLA 3101

Query: 445  VTDRGRLFGFGDNERAQLGHDT 466
            VTD G+++ +GDN+  Q G+ T
Sbjct: 3102 VTDIGQVYAWGDNDHGQQGNGT 3123



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 72/247 (29%), Positives = 124/247 (50%), Gaps = 12/247 (4%)

Query: 235  GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
            G ++  G N  GQLG   G  +  P   +S++ L  V    Q+  G   + AVT +G VY
Sbjct: 3784 GAIYGWGHNHRGQLGGLEGAKVKLPVLCESLSALRPV----QLTGGEQTLFAVTADGKVY 3839

Query: 292  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 351
            + G G+   LG G     + P  +++ +   +  V V++G +H +AL S G+VY+WG+G 
Sbjct: 3840 ATGYGAVGRLGIGGTDSVMVPTLLESIQHVFVKKVAVNSGGKHCLALSSEGHVYSWGEGD 3899

Query: 352  CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 411
             G LGHG+ +    P+ +  L     V +      +  +   G +Y +G   +G LG   
Sbjct: 3900 DGKLGHGNRLSYDRPKLIEELLGTEIVDIACGGHHSAAITSAGWLYTWGKGRYGRLG--- 3956

Query: 412  RGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG 469
             G S+  L P+++++L+ + V  ++  +G   T+ VTD   ++ +GD +  +LG     G
Sbjct: 3957 HGDSEDQLTPKLIEALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRGGSDG 4016

Query: 470  CLEPTEI 476
            C  P +I
Sbjct: 4017 CKIPMKI 4023



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 73/244 (29%), Positives = 114/244 (46%), Gaps = 10/244 (4%)

Query: 237  VHTCGSNTHGQLG--HGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 294
            V+  G N   QLG   G  +  P    +  L ++  V  IA G   +  V+  G +Y+ G
Sbjct: 2792 VYVWGLNDKDQLGGLKGSKIKLPVYSEV--LSKLKPV-HIAGGSKTLFVVSQEGKLYACG 2848

Query: 295  SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGA 354
             G+N  LG G+  +  +P+ I    +  I  V V +G +H +AL   G V++WG+G  G 
Sbjct: 2849 EGTNGRLGLGDDSNVCEPKPIPFLSQYVIKKVAVHSGGKHALALTQDGKVFSWGEGEDGK 2908

Query: 355  LGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGV 414
            LGHG+ I    P  + SLKS     +      +  +  +G +Y +G   +G LG  D   
Sbjct: 2909 LGHGNSISLDKPRLIESLKSKRIRDIACGSGHSAAITSSGELYTWGLGEYGRLGHGDTAT 2968

Query: 415  SDKVLRPRILDSLRAHHVSQISTGLY--HTVVVTDRGRLFGFGDNERAQLGHDTLRGCLE 472
              K   P+++ SL    V QI+ G     T+ +T  G ++ +GD +  +LG     GC  
Sbjct: 2969 QSK---PKLVQSLVGQRVIQIACGSRDAQTMALTADGLVYSWGDGDFGKLGRGGSDGCYT 3025

Query: 473  PTEI 476
            P  I
Sbjct: 3026 PLLI 3029



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 80/253 (31%), Positives = 118/253 (46%), Gaps = 13/253 (5%)

Query: 119  GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTR---INFPSAAHVVQVSASENHA 175
            G++   L  +  VFS G    G LGHG      +S  +   I    +  +  ++    H+
Sbjct: 2886 GKHALALTQDGKVFSWGEGEDGKLGHG----NSISLDKPRLIESLKSKRIRDIACGSGHS 2941

Query: 176  AFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN--FTGFLTI 233
            A +  SG+++T G       GH DT     +P+LV++L G    Q+  G     T  LT 
Sbjct: 2942 AAITSSGELYTWGLGEYGRLGHGDTATQ-SKPKLVQSLVGQRVIQIACGSRDAQTMALTA 3000

Query: 234  RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
             G V++ G    G+LG G +    TP  I  L  +G VVQI  G  + LA+T  G V+++
Sbjct: 3001 DGLVYSWGDGDFGKLGRGGSDGCYTPLLIDRLNGLG-VVQIECGAQFSLALTKYGEVWTW 3059

Query: 294  GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 353
            G G  F LGHG  H   +P  ++  R  G  ++ V+ G  H +A+   G VY WG    G
Sbjct: 3060 GKGDYFRLGHGNDHHVRKPTLVEGLR--GKKIIHVAVGALHCLAVTDIGQVYAWGDNDHG 3117

Query: 354  ALGHGDEIDKTLP 366
              G+G  I    P
Sbjct: 3118 QQGNGTTIVNKKP 3130



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 92/342 (26%), Positives = 153/342 (44%), Gaps = 44/342 (12%)

Query: 41  TFGGSHGLYPQKFRSLVDLAASQLCALHSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSV 100
           TF G   +Y   + ++ +L   QLC        +S N  + ++   +   +RV  F    
Sbjct: 446 TFNGPSPVY---YDTISELGIKQLCCTERAVIILSVNGNVYMMYYGSET-QRVYGF---- 497

Query: 101 EHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHG-------PETTQCVS 153
             S   +   A +   + G ++  L  ++SV+S G+  CG LGHG       P+  + + 
Sbjct: 498 --SEKPITMIASH---SDGTHYLALTQDNSVYSWGNGECGRLGHGNMTWYDEPKLIEALV 552

Query: 154 FTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEAL 213
              I F        ++    ++A +  +G+++T G  +    GH ++++ +  P LV AL
Sbjct: 553 EKNITF--------IACGSTYSAALSSNGELYTWGRGNYGKLGHGNSDKDVMIPTLVTAL 604

Query: 214 KGVPCKQVTAG---LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS 270
            G     V  G      T  +T  G V + G   HG+LG G      TPK +  L ++ +
Sbjct: 605 NGHMVVYVACGGGRDPQTLCVTASGIVFSWGDGNHGKLGRGGCDGSKTPKIVDKLLDI-N 663

Query: 271 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 330
           V ++  G  +  A+T  G VY++G G ++ LGHG +     P+ I   + K I  + +  
Sbjct: 664 VAKVYCGQQFSAALTAYGEVYTWGKGEDYKLGHGNEDHVRYPKIIDILKTKKIKDLYI-- 721

Query: 331 GDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTL----PEP 368
           G  HV+AL     VY WG+       HG +ID  L    PEP
Sbjct: 722 GHLHVLALTEDQLVYGWGRN-----DHG-QIDPALGTIVPEP 757



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 73/247 (29%), Positives = 116/247 (46%), Gaps = 12/247 (4%)

Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 290
           LT    V++ G+   G+LGHG+      PK I  L E  ++  IA G +Y  A++ NG +
Sbjct: 517 LTQDNSVYSWGNGECGRLGHGNMTWYDEPKLIEALVE-KNITFIACGSTYSAALSSNGEL 575

Query: 291 YSFGSGSNFCLGHGE-QHDELQPRAIQTFRRKGIHVVRVSAG---DEHVVALDSSGYVYT 346
           Y++G G+   LGHG    D + P  +      G  VV V+ G   D   + + +SG V++
Sbjct: 576 YTWGRGNYGKLGHGNSDKDVMIPTLVTAL--NGHMVVYVACGGGRDPQTLCVTASGIVFS 633

Query: 347 WGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGS 406
           WG G  G LG G       P+ +  L      +V   ++ +  L   G VY +G      
Sbjct: 634 WGDGNHGKLGRGGCDGSKTPKIVDKLLDINVAKVYCGQQFSAALTAYGEVYTWGKGEDYK 693

Query: 407 LGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDT 466
           LG    G  D V  P+I+D L+   +  +  G  H + +T+   ++G+G N+  Q+  D 
Sbjct: 694 LG---HGNEDHVRYPKIIDILKTKKIKDLYIGHLHVLALTEDQLVYGWGRNDHGQI--DP 748

Query: 467 LRGCLEP 473
             G + P
Sbjct: 749 ALGTIVP 755



 Score = 89.7 bits (221), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 75/272 (27%), Positives = 124/272 (45%), Gaps = 20/272 (7%)

Query: 93   VLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQC 151
            V   L+S++H           + + +G  H L +S+   V+S G    G LGHG      
Sbjct: 3859 VPTLLESIQH------VFVKKVAVNSGGKHCLALSSEGHVYSWGEGDDGKLGHGNR---- 3908

Query: 152  VSFTR---INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPR 208
            +S+ R   I       +V ++   +H+A +  +G ++T G       GH D+   +  P+
Sbjct: 3909 LSYDRPKLIEELLGTEIVDIACGGHHSAAITSAGWLYTWGKGRYGRLGHGDSEDQL-TPK 3967

Query: 209  LVEALKGVPCKQVTAGLNFTGFL--TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 266
            L+EAL+      V  G      L  T   +V + G   +G+LG G +     P  I  L 
Sbjct: 3968 LIEALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRGGSDGCKIPMKIESLA 4027

Query: 267  EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVV 326
             +G V+++  G  + +A+T +G +Y++G G    LGHG      +PR +     +G  ++
Sbjct: 4028 GLG-VIKVECGSQFSVALTRSGAIYTWGKGDYHRLGHGTDDHVRRPRKVAAL--QGKKII 4084

Query: 327  RVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 358
             ++ G  H VA    G V+TWG    G LG G
Sbjct: 4085 SIATGSLHCVACTDKGEVFTWGDNDEGQLGDG 4116



 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 71/264 (26%), Positives = 117/264 (44%), Gaps = 12/264 (4%)

Query: 141 VLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDT 200
           ++ +G ET +   F+         ++   +   H   + Q   V++ G+      GH + 
Sbjct: 484 MMYYGSETQRVYGFSE----KPITMIASHSDGTHYLALTQDNSVYSWGNGECGRLGHGNM 539

Query: 201 NRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDT-LDRPTP 259
                 P+L+EAL       +  G  ++  L+  G ++T G   +G+LGHG++  D   P
Sbjct: 540 TW-YDEPKLIEALVEKNITFIACGSTYSAALSSNGELYTWGRGNYGKLGHGNSDKDVMIP 598

Query: 260 KSIAPLEEVGSVVQIAAG---PSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQ 316
             +  L     VV +A G       L VT +G+V+S+G G++  LG G       P+ + 
Sbjct: 599 TLVTALNG-HMVVYVACGGGRDPQTLCVTASGIVFSWGDGNHGKLGRGGCDGSKTPKIVD 657

Query: 317 TFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHL 376
                 I+V +V  G +   AL + G VYTWGKG    LGHG+E     P+ +  LK+  
Sbjct: 658 KLL--DINVAKVYCGQQFSAALTAYGEVYTWGKGEDYKLGHGNEDHVRYPKIIDILKTKK 715

Query: 377 AVQVCARKRKTFVLVDTGSVYGFG 400
              +         L +   VYG+G
Sbjct: 716 IKDLYIGHLHVLALTEDQLVYGWG 739



 Score = 68.9 bits (167), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 59/225 (26%), Positives = 96/225 (42%), Gaps = 21/225 (9%)

Query: 253 TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQP 312
           T + P+P     + E+G + Q+      ++ ++ NG VY    GS             + 
Sbjct: 446 TFNGPSPVYYDTISELG-IKQLCCTERAVIILSVNGNVYMMYYGS-------------ET 491

Query: 313 RAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSL 372
           + +  F  K I ++   +   H +AL     VY+WG G CG LGHG+      P+ + +L
Sbjct: 492 QRVYGFSEKPITMIASHSDGTHYLALTQDNSVYSWGNGECGRLGHGNMTWYDEPKLIEAL 551

Query: 373 KSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDK-VLRPRILDSLRAHH 431
                  +      +  L   G +Y +G   +G LG    G SDK V+ P ++ +L  H 
Sbjct: 552 VEKNITFIACGSTYSAALSSNGELYTWGRGNYGKLG---HGNSDKDVMIPTLVTALNGHM 608

Query: 432 VSQISTG---LYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEP 473
           V  ++ G      T+ VT  G +F +GD    +LG     G   P
Sbjct: 609 VVYVACGGGRDPQTLCVTASGIVFSWGDGNHGKLGRGGCDGSKTP 653


>gi|57899942|dbj|BAD87854.1| putative ZR1 protein [Oryza sativa Japonica Group]
          Length = 1091

 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 101/323 (31%), Positives = 159/323 (49%), Gaps = 22/323 (6%)

Query: 157 INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGV 216
           + F     V  +S    HAA V + G++++ G+ S    GH   +  + +P+L+++L  +
Sbjct: 305 LEFAVRLDVQNISCGGRHAALVTKQGEIYSWGEESGGRLGH-GVDCDVAQPKLIDSLAHM 363

Query: 217 PCKQVTAGLNFTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSI-APLEEVGSVVQ 273
             + V  G   T  +T+ G ++T G  T   G LGHG+ +    PK +  PLE +  V  
Sbjct: 364 NIELVACGEYHTCAVTLSGDLYTWGDGTFKFGLLGHGNDVSHWVPKRVDGPLEGI-HVSS 422

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           I+ GP +   VT  G +++FG GS   LGHG++     PR +++   KG+  VR + G  
Sbjct: 423 ISCGPWHTALVTSAGQLFTFGDGSFGVLGHGDRASLSVPREVESL--KGLRTVRAACGVW 480

Query: 334 HVVAL------------DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVC 381
           H  A+             SSG ++TWG G  G LGHGD+  + +P  +++L      QV 
Sbjct: 481 HTAAVVEVMVGNSSSSNCSSGKIFTWGDGDKGRLGHGDKDSRFVPTCVAALVEPNFCQVA 540

Query: 382 ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYH 441
                T  L  +G VY  G   +G LG P    +D +L  R+   L  + V +IS G YH
Sbjct: 541 CGHCLTVALTTSGHVYTMGSAVYGQLGNPQ---ADGLLPVRVEGKLHKNFVEEISCGAYH 597

Query: 442 TVVVTDRGRLFGFGDNERAQLGH 464
             V+T R  ++ +G     +LGH
Sbjct: 598 VAVLTSRTEVYTWGKGANGRLGH 620



 Score =  112 bits (280), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 94/274 (34%), Positives = 128/274 (46%), Gaps = 21/274 (7%)

Query: 116 ITTGRYHTLLISNSS---VFSCGSSLCGVLGHGPETTQCVSFTRINFP-SAAHVVQVSAS 171
           +  G YHT  ++ S     +  G+   G+LGHG + +  V   R++ P    HV  +S  
Sbjct: 368 VACGEYHTCAVTLSGDLYTWGDGTFKFGLLGHGNDVSHWVP-KRVDGPLEGIHVSSISCG 426

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
             H A V  +GQ+FT GD S    GH D    +  PR VE+LKG+   +   G+  T  +
Sbjct: 427 PWHTALVTSAGQLFTFGDGSFGVLGHGD-RASLSVPREVESLKGLRTVRAACGVWHTAAV 485

Query: 232 T------------IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPS 279
                          G + T G    G+LGHGD   R  P  +A L E  +  Q+A G  
Sbjct: 486 VEVMVGNSSSSNCSSGKIFTWGDGDKGRLGHGDKDSRFVPTCVAALVEP-NFCQVACGHC 544

Query: 280 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 339
             +A+T +G VY+ GS     LG+  Q D L P  ++    K   V  +S G  HV  L 
Sbjct: 545 LTVALTTSGHVYTMGSAVYGQLGN-PQADGLLPVRVEGKLHKNF-VEEISCGAYHVAVLT 602

Query: 340 SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
           S   VYTWGKG  G LGHG   DK  P  + +LK
Sbjct: 603 SRTEVYTWGKGANGRLGHGGTDDKNTPTLVEALK 636



 Score = 92.4 bits (228), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 77/279 (27%), Positives = 128/279 (45%), Gaps = 19/279 (6%)

Query: 207 PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 266
           P+ +E    +  + ++ G      +T +G +++ G  + G+LGHG   D   PK I  L 
Sbjct: 302 PKPLEFAVRLDVQNISCGGRHAALVTKQGEIYSWGEESGGRLGHGVDCDVAQPKLIDSLA 361

Query: 267 EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS-NF-CLGHGEQHDELQPRAIQTFRRKGIH 324
            + ++  +A G  +  AVT +G +Y++G G+  F  LGHG       P+ +     +GIH
Sbjct: 362 HM-NIELVACGEYHTCAVTLSGDLYTWGDGTFKFGLLGHGNDVSHWVPKRVDG-PLEGIH 419

Query: 325 VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARK 384
           V  +S G  H   + S+G ++T+G G  G LGHGD    ++P  + SLK    V+     
Sbjct: 420 VSSISCGPWHTALVTSAGQLFTFGDGSFGVLGHGDRASLSVPREVESLKGLRTVRAACGV 479

Query: 385 RKTFVLVDT------------GSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHV 432
             T  +V+             G ++ +G    G LG  D+   D    P  + +L   + 
Sbjct: 480 WHTAAVVEVMVGNSSSSNCSSGKIFTWGDGDKGRLGHGDK---DSRFVPTCVAALVEPNF 536

Query: 433 SQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCL 471
            Q++ G   TV +T  G ++  G     QLG+    G L
Sbjct: 537 CQVACGHCLTVALTTSGHVYTMGSAVYGQLGNPQADGLL 575



 Score = 88.2 bits (217), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 67/222 (30%), Positives = 105/222 (47%), Gaps = 26/222 (11%)

Query: 271 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 330
           V  I+ G  +   VT  G +YS+G  S   LGHG   D  QP+ I +     I +V  + 
Sbjct: 313 VQNISCGGRHAALVTKQGEIYSWGEESGGRLGHGVDCDVAQPKLIDSLAHMNIELV--AC 370

Query: 331 GDEHVVALDSSGYVYTWGKG--YCGALGHGDEIDKTLPE----PLSSLKSHLAVQVCARK 384
           G+ H  A+  SG +YTWG G    G LGHG+++   +P+    PL  +  H++   C   
Sbjct: 371 GEYHTCAVTLSGDLYTWGDGTFKFGLLGHGNDVSHWVPKRVDGPLEGI--HVSSISCG-P 427

Query: 385 RKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV 444
             T ++   G ++ FG   FG LG  DR     +  PR ++SL+     + + G++HT  
Sbjct: 428 WHTALVTSAGQLFTFGDGSFGVLGHGDRA---SLSVPREVESLKGLRTVRAACGVWHTAA 484

Query: 445 VTD------------RGRLFGFGDNERAQLGHDTLRGCLEPT 474
           V +             G++F +GD ++ +LGH        PT
Sbjct: 485 VVEVMVGNSSSSNCSSGKIFTWGDGDKGRLGHGDKDSRFVPT 526



 Score = 76.6 bits (187), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 68/229 (29%), Positives = 103/229 (44%), Gaps = 26/229 (11%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           I+ G +HT L++++  +F+ G    GVLGHG   +  V    +        V+ +    H
Sbjct: 423 ISCGPWHTALVTSAGQLFTFGDGSFGVLGHGDRASLSVP-REVESLKGLRTVRAACGVWH 481

Query: 175 AAFVLQ------------SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 222
            A V++            SG++FT GD      GH D +   F P  V AL      QV 
Sbjct: 482 TAAVVEVMVGNSSSSNCSSGKIFTWGDGDKGRLGHGDKDS-RFVPTCVAALVEPNFCQVA 540

Query: 223 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS-----VVQIAAG 277
            G   T  LT  GHV+T GS  +GQLG+      P    + P+   G      V +I+ G
Sbjct: 541 CGHCLTVALTTSGHVYTMGSAVYGQLGN------PQADGLLPVRVEGKLHKNFVEEISCG 594

Query: 278 PSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVV 326
             ++  +T    VY++G G+N  LGHG   D+  P  ++  + K +  V
Sbjct: 595 AYHVAVLTSRTEVYTWGKGANGRLGHGGTDDKNTPTLVEALKDKQVRSV 643



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 58/174 (33%), Positives = 87/174 (50%), Gaps = 8/174 (4%)

Query: 306 QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTL 365
           + D L P+ ++   R  + V  +S G  H   +   G +Y+WG+   G LGHG + D   
Sbjct: 296 KMDYLVPKPLEFAVR--LDVQNISCGGRHAALVTKQGEIYSWGEESGGRLGHGVDCDVAQ 353

Query: 366 PEPLSSLKSHLAVQVCA-RKRKTFVLVDTGSVY--GFGWMGFGSLGFPDRGVSDKVLRPR 422
           P+ + SL +H+ +++ A  +  T  +  +G +Y  G G   FG LG  +  VS  V + R
Sbjct: 354 PKLIDSL-AHMNIELVACGEYHTCAVTLSGDLYTWGDGTFKFGLLGHGN-DVSHWVPK-R 410

Query: 423 ILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 476
           +   L   HVS IS G +HT +VT  G+LF FGD     LGH        P E+
Sbjct: 411 VDGPLEGIHVSSISCGPWHTALVTSAGQLFTFGDGSFGVLGHGDRASLSVPREV 464


>gi|395541966|ref|XP_003772907.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3, partial
           [Sarcophilus harrisii]
          Length = 638

 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 97/277 (35%), Positives = 145/277 (52%), Gaps = 20/277 (7%)

Query: 219 KQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS-----VVQ 273
           K+V  G N + FL   G V+TCGSNT GQLGH    ++P        E++G+     +V 
Sbjct: 38  KEVACGGNHSIFLLEDGEVYTCGSNTKGQLGHEREGNKP--------EQIGALADQHIVH 89

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQ-PRAIQTFRRKGIHVVRVSAGD 332
           +A G S+ LA++  G ++S+G+GS+  LGH    D +  PR I+   ++ I  ++VS G+
Sbjct: 90  VACGESHSLALSDQGQLFSWGAGSDGQLGHTTTEDSVAIPRLIKKLNQQMI--LQVSCGN 147

Query: 333 EHVVALDSSGYVYTWGKGYCGALGHGDEI-DKTLPEPLSSLKSHLAVQVCARKRKTFVLV 391
            H +AL + G  +TWG+   G LG G E   +  P+ + SL+     QV A    +F L 
Sbjct: 148 WHCMALAADGQFFTWGQNRHGQLGLGKEFPSQASPQRVKSLEGIPLAQVAAGGAHSFALS 207

Query: 392 DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRL 451
            +G+V+G+G    G LG  D   +D+   P  +  LR   V  IS G  HT V+T  G +
Sbjct: 208 LSGAVFGWGRNNAGQLGLSDE--TDRQ-SPCHVKLLRTQKVVYISCGEEHTAVLTKSGGV 264

Query: 452 FGFGDNERAQLGHDTLRGCLEPTEIFIQEMEEDTGLA 488
           F FG     QLGHD++   + P  +      E T +A
Sbjct: 265 FTFGAGSFGQLGHDSMNDEVNPRRVLELMGSEVTQIA 301



 Score =  132 bits (332), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 96/309 (31%), Positives = 160/309 (51%), Gaps = 14/309 (4%)

Query: 159 FPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVP 217
           F S   + +V+   NH+ F+L+ G+V+TCG N+    GH R+ N+P      + AL    
Sbjct: 31  FISDRSIKEVACGGNHSIFLLEDGEVYTCGSNTKGQLGHEREGNKP----EQIGALADQH 86

Query: 218 CKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDR-PTPKSIAPLEEVGSVVQIAA 276
              V  G + +  L+ +G + + G+ + GQLGH  T D    P+ I  L +   ++Q++ 
Sbjct: 87  IVHVACGESHSLALSDQGQLFSWGAGSDGQLGHTTTEDSVAIPRLIKKLNQ-QMILQVSC 145

Query: 277 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH-DELQPRAIQTFRRKGIHVVRVSAGDEHV 335
           G  + +A+  +G  +++G   +  LG G++   +  P+ +++   +GI + +V+AG  H 
Sbjct: 146 GNWHCMALAADGQFFTWGQNRHGQLGLGKEFPSQASPQRVKSL--EGIPLAQVAAGGAHS 203

Query: 336 VALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGS 395
            AL  SG V+ WG+   G LG  DE D+  P  +  L++   V +   +  T VL  +G 
Sbjct: 204 FALSLSGAVFGWGRNNAGQLGLSDETDRQSPCHVKLLRTQKVVYISCGEEHTAVLTKSGG 263

Query: 396 VYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV-VTDRGRLFGF 454
           V+ FG   FG LG     ++D+V  PR +  L    V+QI+ G  HT+  V   G ++ F
Sbjct: 264 VFTFGAGSFGQLG--HDSMNDEV-NPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAF 320

Query: 455 GDNERAQLG 463
           G   R QLG
Sbjct: 321 GCGARGQLG 329



 Score =  125 bits (314), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 96/321 (29%), Positives = 151/321 (47%), Gaps = 11/321 (3%)

Query: 119 GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
           G +   L+ +  V++CGS+  G LGH  E  +     +I   +  H+V V+  E+H+  +
Sbjct: 44  GNHSIFLLEDGEVYTCGSNTKGQLGHEREGNKP---EQIGALADQHIVHVACGESHSLAL 100

Query: 179 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVH 238
              GQ+F+ G  S    GH  T   +  PRL++ L      QV+ G      L   G   
Sbjct: 101 SDQGQLFSWGAGSDGQLGHTTTEDSVAIPRLIKKLNQQMILQVSCGNWHCMALAADGQFF 160

Query: 239 TCGSNTHGQLGHGDTL-DRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 297
           T G N HGQLG G     + +P+ +  LE +  + Q+AAG ++  A++ +G V+ +G  +
Sbjct: 161 TWGQNRHGQLGLGKEFPSQASPQRVKSLEGI-PLAQVAAGGAHSFALSLSGAVFGWGRNN 219

Query: 298 NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 357
              LG  ++ D   P  ++  R +   VV +S G+EH   L  SG V+T+G G  G LGH
Sbjct: 220 AGQLGLSDETDRQSPCHVKLLRTQ--KVVYISCGEEHTAVLTKSGGVFTFGAGSFGQLGH 277

Query: 358 GDEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSD 416
               D+  P  +  L      Q+ C R+     +  +G +Y FG    G LG    G + 
Sbjct: 278 DSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLG---TGHTC 334

Query: 417 KVLRPRILDSLRAHHVSQIST 437
            V  P  +    A H  Q+S+
Sbjct: 335 NVKCPSPVKGHWAAHNGQLSS 355


>gi|168035996|ref|XP_001770494.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162678202|gb|EDQ64663.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 1125

 Score =  136 bits (343), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 106/335 (31%), Positives = 161/335 (48%), Gaps = 26/335 (7%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V  V+    HAA V + G+VFT G+ S    GH   +  +  P+LVEAL     + V  G
Sbjct: 311 VQYVACGGKHAALVTKQGEVFTWGEESGGRLGH-GVDCDVSHPQLVEALASSTTEVVACG 369

Query: 225 LNFTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSI-APLEEVGSVVQIAAGPSYM 281
                 +T+ G ++T G  TH  G LGHG+ +    PK +  PLEEV  V  IA GP + 
Sbjct: 370 EYHGCAVTLSGDLYTWGDGTHSLGLLGHGNDISHWIPKRVNGPLEEV-RVASIACGPWHT 428

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL--- 338
             VT  G +++FG G+   LGH ++     PR +++   KG+  VR + G  H  A+   
Sbjct: 429 AVVTTAGQLFTFGDGTFGVLGHNDRQSAYSPREVESL--KGLRTVRAACGVWHTAAVVEV 486

Query: 339 ---------DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFV 389
                     SSG ++TWG G  G LGHGD+  + +P  +++L  H   +V      T  
Sbjct: 487 MVGSSSASSCSSGKLFTWGDGDKGRLGHGDKEQRLVPTCVAALVDHNFRKVACGHSLTVA 546

Query: 390 LVDTGSVYGFGWMGFGSLGFPDR-GVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDR 448
           L   G V+  G   FG LG P   G    ++  R++D+    +V  I+ G +H   VT +
Sbjct: 547 LTTKGEVFTMGSSMFGQLGDPQADGKLPGMVEGRLVDA----YVEDIACGAHHVACVTLK 602

Query: 449 GRLFGFGDNERAQLGHDTLRGCLEPTEIFIQEMEE 483
             ++ +G     +LGH        PT   ++ ++E
Sbjct: 603 SEVYTWGKGANGRLGHGDQEDRNTPT--LVEALKE 635



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 84/274 (30%), Positives = 127/274 (46%), Gaps = 21/274 (7%)

Query: 116 ITTGRYHTLLISNSS---VFSCGSSLCGVLGHGPETTQCVSFTRINFP-SAAHVVQVSAS 171
           +  G YH   ++ S     +  G+   G+LGHG + +  +   R+N P     V  ++  
Sbjct: 366 VACGEYHGCAVTLSGDLYTWGDGTHSLGLLGHGNDISHWIP-KRVNGPLEEVRVASIACG 424

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
             H A V  +GQ+FT GD +    GH D  +  + PR VE+LKG+   +   G+  T  +
Sbjct: 425 PWHTAVVTTAGQLFTFGDGTFGVLGHND-RQSAYSPREVESLKGLRTVRAACGVWHTAAV 483

Query: 232 T------------IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPS 279
                          G + T G    G+LGHGD   R  P  +A L +  +  ++A G S
Sbjct: 484 VEVMVGSSSASSCSSGKLFTWGDGDKGRLGHGDKEQRLVPTCVAALVD-HNFRKVACGHS 542

Query: 280 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 339
             +A+T  G V++ GS     LG   Q D   P  ++  R    +V  ++ G  HV  + 
Sbjct: 543 LTVALTTKGEVFTMGSSMFGQLGD-PQADGKLPGMVEG-RLVDAYVEDIACGAHHVACVT 600

Query: 340 SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
               VYTWGKG  G LGHGD+ D+  P  + +LK
Sbjct: 601 LKSEVYTWGKGANGRLGHGDQEDRNTPTLVEALK 634



 Score = 89.4 bits (220), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 74/240 (30%), Positives = 111/240 (46%), Gaps = 27/240 (11%)

Query: 253 TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQP 312
            LD P PK++     V  V  +A G  +   VT  G V+++G  S   LGHG   D   P
Sbjct: 294 NLDAPLPKALESAI-VLDVQYVACGGKHAALVTKQGEVFTWGEESGGRLGHGVDCDVSHP 352

Query: 313 RAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY--CGALGHGDEIDKTLPE--- 367
           + ++        VV  + G+ H  A+  SG +YTWG G    G LGHG++I   +P+   
Sbjct: 353 QLVEALASSTTEVV--ACGEYHGCAVTLSGDLYTWGDGTHSLGLLGHGNDISHWIPKRVN 410

Query: 368 -PLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDS 426
            PL  ++  +A   C     T V+   G ++ FG   FG LG  DR        PR ++S
Sbjct: 411 GPLEEVR--VASIACG-PWHTAVVTTAGQLFTFGDGTFGVLGHNDR---QSAYSPREVES 464

Query: 427 LRAHHVSQISTGLYHTVVVTD------------RGRLFGFGDNERAQLGHDTLRGCLEPT 474
           L+     + + G++HT  V +             G+LF +GD ++ +LGH      L PT
Sbjct: 465 LKGLRTVRAACGVWHTAAVVEVMVGSSSASSCSSGKLFTWGDGDKGRLGHGDKEQRLVPT 524



 Score = 82.8 bits (203), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 73/279 (26%), Positives = 125/279 (44%), Gaps = 19/279 (6%)

Query: 207 PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 266
           P+ +E+   +  + V  G      +T +G V T G  + G+LGHG   D   P+ +  L 
Sbjct: 300 PKALESAIVLDVQYVACGGKHAALVTKQGEVFTWGEESGGRLGHGVDCDVSHPQLVEALA 359

Query: 267 EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNF--CLGHGEQHDELQPRAIQTFRRKGIH 324
              + V +A G  +  AVT +G +Y++G G++    LGHG       P+ +     + + 
Sbjct: 360 SSTTEV-VACGEYHGCAVTLSGDLYTWGDGTHSLGLLGHGNDISHWIPKRVNGPLEE-VR 417

Query: 325 VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARK 384
           V  ++ G  H   + ++G ++T+G G  G LGH D      P  + SLK    V+     
Sbjct: 418 VASIACGPWHTAVVTTAGQLFTFGDGTFGVLGHNDRQSAYSPREVESLKGLRTVRAACGV 477

Query: 385 RKTFVLVDT------------GSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHV 432
             T  +V+             G ++ +G    G LG  D+   ++ L P  + +L  H+ 
Sbjct: 478 WHTAAVVEVMVGSSSASSCSSGKLFTWGDGDKGRLGHGDK---EQRLVPTCVAALVDHNF 534

Query: 433 SQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCL 471
            +++ G   TV +T +G +F  G +   QLG     G L
Sbjct: 535 RKVACGHSLTVALTTKGEVFTMGSSMFGQLGDPQADGKL 573



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 65/228 (28%), Positives = 99/228 (43%), Gaps = 16/228 (7%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           I  G +HT +++ +  +F+ G    GVLGH  +     S   +        V+ +    H
Sbjct: 421 IACGPWHTAVVTTAGQLFTFGDGTFGVLGHN-DRQSAYSPREVESLKGLRTVRAACGVWH 479

Query: 175 AAFVLQ------------SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 222
            A V++            SG++FT GD      GH D  + +  P  V AL     ++V 
Sbjct: 480 TAAVVEVMVGSSSASSCSSGKLFTWGDGDKGRLGHGDKEQRLV-PTCVAALVDHNFRKVA 538

Query: 223 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 282
            G + T  LT +G V T GS+  GQLG     D   P  +        V  IA G  ++ 
Sbjct: 539 CGHSLTVALTTKGEVFTMGSSMFGQLGD-PQADGKLPGMVEGRLVDAYVEDIACGAHHVA 597

Query: 283 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 330
            VT    VY++G G+N  LGHG+Q D   P  ++  + K +  +   A
Sbjct: 598 CVTLKSEVYTWGKGANGRLGHGDQEDRNTPTLVEALKEKQVKSIACGA 645



 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 49/155 (31%), Positives = 73/155 (47%), Gaps = 2/155 (1%)

Query: 323 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCA 382
           + V  V+ G +H   +   G V+TWG+   G LGHG + D + P+ + +L S     V  
Sbjct: 309 LDVQYVACGGKHAALVTKQGEVFTWGEESGGRLGHGVDCDVSHPQLVEALASSTTEVVAC 368

Query: 383 RKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRP-RILDSLRAHHVSQISTGLYH 441
            +     +  +G +Y +G  G  SLG    G       P R+   L    V+ I+ G +H
Sbjct: 369 GEYHGCAVTLSGDLYTWG-DGTHSLGLLGHGNDISHWIPKRVNGPLEEVRVASIACGPWH 427

Query: 442 TVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 476
           T VVT  G+LF FGD     LGH+  +    P E+
Sbjct: 428 TAVVTTAGQLFTFGDGTFGVLGHNDRQSAYSPREV 462



 Score = 38.5 bits (88), Expect = 7.3,   Method: Compositional matrix adjust.
 Identities = 32/109 (29%), Positives = 48/109 (44%), Gaps = 2/109 (1%)

Query: 125 LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQV 184
           L +   VF+ GSS+ G LG  P+    +          A+V  ++   +H A V    +V
Sbjct: 547 LTTKGEVFTMGSSMFGQLGD-PQADGKLPGMVEGRLVDAYVEDIACGAHHVACVTLKSEV 605

Query: 185 FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
           +T G  ++   GH D       P LVEALK    K +  G  FT  + +
Sbjct: 606 YTWGKGANGRLGHGD-QEDRNTPTLVEALKEKQVKSIACGATFTAAVCL 653


>gi|326522674|dbj|BAJ88383.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 1092

 Score =  136 bits (343), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 104/330 (31%), Positives = 161/330 (48%), Gaps = 24/330 (7%)

Query: 151 CVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRL 209
           C+    + F     V  +S    HA  V + G+V++ G+ S    GH  D + P  +P+L
Sbjct: 299 CLVPKPLEFAGRLDVQNISCGGRHATLVTKQGEVYSWGEESGGRLGHGVDCDVP--QPKL 356

Query: 210 VEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSI-APLE 266
           ++AL  +  + V  G   T  +T+ G ++T G+ T   G  GHG+ +    PK +  PLE
Sbjct: 357 IDALAHMNIELVACGEYHTCAVTLSGDLYTWGNGTFNFGLSGHGNEVSHWMPKRLNGPLE 416

Query: 267 EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVV 326
            +  V  I+ GP +   VT  G +++FG GS   LGHG++     PR +++   KG+  V
Sbjct: 417 GI-HVSSISCGPWHTAVVTSAGQLFTFGDGSFGVLGHGDRQSISVPREVESL--KGLRTV 473

Query: 327 RVSAGDEHVVAL------------DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKS 374
           R + G  H  A+             SSG ++TWG G  G LGHGD+  + +P  ++SL  
Sbjct: 474 RAACGVWHTAAVVEVMVGNSSSSNCSSGKIFTWGDGDKGRLGHGDKETRLVPTCVASLVE 533

Query: 375 HLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQ 434
               QV      T  L  +G VY  G   +G LG P    +D ++  R+   L  + V +
Sbjct: 534 PNFCQVACGHCFTVALTTSGHVYTMGSSVYGQLGNPQ---ADGMVPARVEGKLHKNFVEE 590

Query: 435 ISTGLYHTVVVTDRGRLFGFGDNERAQLGH 464
           IS G YH  V+T R  ++ +G     +LGH
Sbjct: 591 ISCGAYHVAVLTSRTEVYTWGKGANGRLGH 620



 Score =  115 bits (288), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 94/274 (34%), Positives = 130/274 (47%), Gaps = 21/274 (7%)

Query: 116 ITTGRYHTLLISNSS---VFSCGSSLCGVLGHGPETTQCVSFTRINFP-SAAHVVQVSAS 171
           +  G YHT  ++ S     +  G+   G+ GHG E +  +   R+N P    HV  +S  
Sbjct: 368 VACGEYHTCAVTLSGDLYTWGNGTFNFGLSGHGNEVSHWMP-KRLNGPLEGIHVSSISCG 426

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
             H A V  +GQ+FT GD S    GH D  + I  PR VE+LKG+   +   G+  T  +
Sbjct: 427 PWHTAVVTSAGQLFTFGDGSFGVLGHGD-RQSISVPREVESLKGLRTVRAACGVWHTAAV 485

Query: 232 T------------IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPS 279
                          G + T G    G+LGHGD   R  P  +A L E  +  Q+A G  
Sbjct: 486 VEVMVGNSSSSNCSSGKIFTWGDGDKGRLGHGDKETRLVPTCVASLVEP-NFCQVACGHC 544

Query: 280 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 339
           + +A+T +G VY+ GS     LG+  Q D + P  ++    K   V  +S G  HV  L 
Sbjct: 545 FTVALTTSGHVYTMGSSVYGQLGN-PQADGMVPARVEGKLHKNF-VEEISCGAYHVAVLT 602

Query: 340 SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
           S   VYTWGKG  G LGHGD  D+  P  + +LK
Sbjct: 603 SRTEVYTWGKGANGRLGHGDTDDRNSPTLVEALK 636



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 78/244 (31%), Positives = 113/244 (46%), Gaps = 31/244 (12%)

Query: 251 GDTLDRPTPKSIAPLEEVG--SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHD 308
           G  +D   PK   PLE  G   V  I+ G  +   VT  G VYS+G  S   LGHG   D
Sbjct: 294 GAKMDCLVPK---PLEFAGRLDVQNISCGGRHATLVTKQGEVYSWGEESGGRLGHGVDCD 350

Query: 309 ELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC--GALGHGDEIDKTLP 366
             QP+ I       I +V  + G+ H  A+  SG +YTWG G    G  GHG+E+   +P
Sbjct: 351 VPQPKLIDALAHMNIELV--ACGEYHTCAVTLSGDLYTWGNGTFNFGLSGHGNEVSHWMP 408

Query: 367 E----PLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPR 422
           +    PL  +  H++   C     T V+   G ++ FG   FG LG  DR     +  PR
Sbjct: 409 KRLNGPLEGI--HVSSISCG-PWHTAVVTSAGQLFTFGDGSFGVLGHGDR---QSISVPR 462

Query: 423 ILDSLRAHHVSQISTGLYHTVVVTD------------RGRLFGFGDNERAQLGHDTLRGC 470
            ++SL+     + + G++HT  V +             G++F +GD ++ +LGH      
Sbjct: 463 EVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKIFTWGDGDKGRLGHGDKETR 522

Query: 471 LEPT 474
           L PT
Sbjct: 523 LVPT 526



 Score = 77.8 bits (190), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 67/225 (29%), Positives = 104/225 (46%), Gaps = 18/225 (8%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSASEN 173
           I+ G +HT +++++  +F+ G    GVLGHG    Q +S  R +        V+ +    
Sbjct: 423 ISCGPWHTAVVTSAGQLFTFGDGSFGVLGHG--DRQSISVPREVESLKGLRTVRAACGVW 480

Query: 174 HAAFVLQ------------SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQV 221
           H A V++            SG++FT GD      GH D    +  P  V +L      QV
Sbjct: 481 HTAAVVEVMVGNSSSSNCSSGKIFTWGDGDKGRLGHGDKETRLV-PTCVASLVEPNFCQV 539

Query: 222 TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 281
             G  FT  LT  GHV+T GS+ +GQLG+    D   P  +        V +I+ G  ++
Sbjct: 540 ACGHCFTVALTTSGHVYTMGSSVYGQLGNPQA-DGMVPARVEGKLHKNFVEEISCGAYHV 598

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVV 326
             +T    VY++G G+N  LGHG+  D   P  ++  + K +  V
Sbjct: 599 AVLTSRTEVYTWGKGANGRLGHGDTDDRNSPTLVEALKDKQVRSV 643



 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 56/177 (31%), Positives = 88/177 (49%), Gaps = 10/177 (5%)

Query: 304 GEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK 363
           G + D L P+ ++   R  + V  +S G  H   +   G VY+WG+   G LGHG + D 
Sbjct: 294 GAKMDCLVPKPLEFAGR--LDVQNISCGGRHATLVTKQGEVYSWGEESGGRLGHGVDCDV 351

Query: 364 TLPEPLSSLKSHLAVQVCA-RKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKV---L 419
             P+ + +L +H+ +++ A  +  T  +  +G +Y +G    G+  F   G  ++V   +
Sbjct: 352 PQPKLIDAL-AHMNIELVACGEYHTCAVTLSGDLYTWG---NGTFNFGLSGHGNEVSHWM 407

Query: 420 RPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 476
             R+   L   HVS IS G +HT VVT  G+LF FGD     LGH   +    P E+
Sbjct: 408 PKRLNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGSFGVLGHGDRQSISVPREV 464



 Score = 50.1 bits (118), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 53/199 (26%), Positives = 86/199 (43%), Gaps = 22/199 (11%)

Query: 92  RVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQC 151
           R +R    V H++ +VE       +  G   +   S+  +F+ G    G LGHG + T+ 
Sbjct: 471 RTVRAACGVWHTAAVVE-------VMVGNSSSSNCSSGKIFTWGDGDKGRLGHGDKETRL 523

Query: 152 V-----SFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFR 206
           V     S    NF       QV+        +  SG V+T G +     G+   +  +  
Sbjct: 524 VPTCVASLVEPNF------CQVACGHCFTVALTTSGHVYTMGSSVYGQLGNPQADGMV-- 575

Query: 207 PRLVEA-LKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL 265
           P  VE  L     ++++ G      LT R  V+T G   +G+LGHGDT DR +P  +  L
Sbjct: 576 PARVEGKLHKNFVEEISCGAYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNSPTLVEAL 635

Query: 266 EEVGSVVQIAAGPSYMLAV 284
           ++   V  +  G ++  A+
Sbjct: 636 KD-KQVRSVVCGINFTAAI 653



 Score = 44.3 bits (103), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 38/124 (30%), Positives = 58/124 (46%), Gaps = 3/124 (2%)

Query: 115 QITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
           Q+  G   T+ ++ S  V++ GSS+ G LG+ P+    V            V ++S    
Sbjct: 538 QVACGHCFTVALTTSGHVYTMGSSVYGQLGN-PQADGMVPARVEGKLHKNFVEEISCGAY 596

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
           H A +    +V+T G  ++   GH DT+     P LVEALK    + V  G+NFT  + I
Sbjct: 597 HVAVLTSRTEVYTWGKGANGRLGHGDTDD-RNSPTLVEALKDKQVRSVVCGINFTAAICI 655

Query: 234 RGHV 237
              V
Sbjct: 656 HKWV 659


>gi|50418309|gb|AAH77375.1| MGC81587 protein [Xenopus laevis]
          Length = 677

 Score =  136 bits (343), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 102/311 (32%), Positives = 148/311 (47%), Gaps = 12/311 (3%)

Query: 156 RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 215
           R +F    +V  V     H  FVL  G V+TCG N     GH  + +   +P  V AL  
Sbjct: 27  RCDFFINKNVRDVGCGNRHTGFVLDDGTVYTCGCNDLGQLGHDKSRK---KPEQVGALDA 83

Query: 216 VPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDR-PTPKSIAPLEEVGSVVQI 274
                V+ G   T  L  +G V + G   HGQ+G     D    P++I  L ++  +VQ+
Sbjct: 84  QIIVAVSCGEAHTLALNDKGQVFSWGHAAHGQIGVSIAEDYIRVPRNIKSLSDI-QIVQV 142

Query: 275 AAGPSYMLAVTGNGVVYSFGSGSNFCLGHG-EQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           A G  + LA++    +YS+G      LG G E+  E  PR I++    GI    ++AG  
Sbjct: 143 ACGHHHSLALSKESNIYSWGQNQYGQLGLGSEKRKESAPRHIKSL--SGIPFAHIAAGGG 200

Query: 334 HVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDT 393
           H  AL  SG ++ WG+   G LG  DE D++ P  L SL+S   + +C  +  T  L   
Sbjct: 201 HSFALTISGAIFGWGRNKFGQLGLNDETDRSDPALLKSLRSQKIIYICCGEDHTAALTKE 260

Query: 394 GSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV-VTDRGRLF 452
           G V+ FG  G+G LG      +   + PR +  L  + V+QI+ G  HT+  V   GR++
Sbjct: 261 GGVFTFGAGGYGQLG---HNSASHEVNPRKVFELMGNIVTQIACGRQHTLAFVPSSGRIY 317

Query: 453 GFGDNERAQLG 463
            FG     QLG
Sbjct: 318 SFGLGGNGQLG 328



 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 85/276 (30%), Positives = 137/276 (49%), Gaps = 10/276 (3%)

Query: 204 IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 263
           +  PR  +       + V  G   TGF+   G V+TCG N  GQLGH  +  R  P+ + 
Sbjct: 22  VIEPRRCDFFINKNVRDVGCGNRHTGFVLDDGTVYTCGCNDLGQLGHDKS--RKKPEQVG 79

Query: 264 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQ-PRAIQTFRRKG 322
            L+    +V ++ G ++ LA+   G V+S+G  ++  +G     D ++ PR I++     
Sbjct: 80  ALD-AQIIVAVSCGEAHTLALNDKGQVFSWGHAAHGQIGVSIAEDYIRVPRNIKSL--SD 136

Query: 323 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK-TLPEPLSSLKSHLAVQVC 381
           I +V+V+ G  H +AL     +Y+WG+   G LG G E  K + P  + SL       + 
Sbjct: 137 IQIVQVACGHHHSLALSKESNIYSWGQNQYGQLGLGSEKRKESAPRHIKSLSGIPFAHIA 196

Query: 382 ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYH 441
           A    +F L  +G+++G+G   FG LG  D   +D+   P +L SLR+  +  I  G  H
Sbjct: 197 AGGGHSFALTISGAIFGWGRNKFGQLGLNDE--TDRS-DPALLKSLRSQKIIYICCGEDH 253

Query: 442 TVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF 477
           T  +T  G +F FG     QLGH++    + P ++F
Sbjct: 254 TAALTKEGGVFTFGAGGYGQLGHNSASHEVNPRKVF 289



 Score =  105 bits (261), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 93/366 (25%), Positives = 160/366 (43%), Gaps = 25/366 (6%)

Query: 119 GRYHT-LLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAF 177
           G  HT  ++ + +V++CG +  G LGH     +     ++    A  +V VS  E H   
Sbjct: 42  GNRHTGFVLDDGTVYTCGCNDLGQLGHDKSRKKP---EQVGALDAQIIVAVSCGEAHTLA 98

Query: 178 VLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHV 237
           +   GQVF+ G  +    G       I  PR +++L  +   QV  G + +  L+   ++
Sbjct: 99  LNDKGQVFSWGHAAHGQIGVSIAEDYIRVPRNIKSLSDIQIVQVACGHHHSLALSKESNI 158

Query: 238 HTCGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 296
           ++ G N +GQLG G +      P+ I  L  +     IAAG  +  A+T +G ++ +G  
Sbjct: 159 YSWGQNQYGQLGLGSEKRKESAPRHIKSLSGI-PFAHIAAGGGHSFALTISGAIFGWGRN 217

Query: 297 SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 356
               LG  ++ D   P  +++ R + I  + +  G++H  AL   G V+T+G G  G LG
Sbjct: 218 KFGQLGLNDETDRSDPALLKSLRSQKI--IYICCGEDHTAALTKEGGVFTFGAGGYGQLG 275

Query: 357 HGDEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVS 415
           H     +  P  +  L  ++  Q+ C R+     +  +G +Y FG  G G LG    G +
Sbjct: 276 HNSASHEVNPRKVFELMGNIVTQIACGRQHTLAFVPSSGRIYSFGLGGNGQLGI---GST 332

Query: 416 DKVLRPRILDSLRAHHVSQI-----STGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGC 470
                P ++      H   +     + G Y         R++  GD   A   + T++ C
Sbjct: 333 SNKKSPSMVKGNWLTHEDYVRRLPEANGCYCV------KRIYSGGDQSFAH--YFTIQNC 384

Query: 471 LEPTEI 476
           L P + 
Sbjct: 385 LPPDDF 390



 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 75/253 (29%), Positives = 118/253 (46%), Gaps = 5/253 (1%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           ++ G  HTL +++   VFS G +  G +G             I   S   +VQV+   +H
Sbjct: 89  VSCGEAHTLALNDKGQVFSWGHAAHGQIGVSIAEDYIRVPRNIKSLSDIQIVQVACGHHH 148

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 234
           +  + +   +++ G N     G     R    PR +++L G+P   + AG   +  LTI 
Sbjct: 149 SLALSKESNIYSWGQNQYGQLGLGSEKRKESAPRHIKSLSGIPFAHIAAGGGHSFALTIS 208

Query: 235 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 294
           G +   G N  GQLG  D  DR  P  +  L     ++ I  G  +  A+T  G V++FG
Sbjct: 209 GAIFGWGRNKFGQLGLNDETDRSDPALLKSLRS-QKIIYICCGEDHTAALTKEGGVFTFG 267

Query: 295 SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA-LDSSGYVYTWGKGYCG 353
           +G    LGH     E+ PR +  F   G  V +++ G +H +A + SSG +Y++G G  G
Sbjct: 268 AGGYGQLGHNSASHEVNPRKV--FELMGNIVTQIACGRQHTLAFVPSSGRIYSFGLGGNG 325

Query: 354 ALGHGDEIDKTLP 366
            LG G   +K  P
Sbjct: 326 QLGIGSTSNKKSP 338



 Score = 74.7 bits (182), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 64/207 (30%), Positives = 101/207 (48%), Gaps = 8/207 (3%)

Query: 114 MQITTGRYHTLLISN-SSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +Q+  G +H+L +S  S+++S G +  G LG G E  +  +   I   S      ++A  
Sbjct: 140 VQVACGHHHSLALSKESNIYSWGQNQYGQLGLGSEKRKESAPRHIKSLSGIPFAHIAAGG 199

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRD-TNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
            H+  +  SG +F  G N     G  D T+R    P L+++L+      +  G + T  L
Sbjct: 200 GHSFALTISGAIFGWGRNKFGQLGLNDETDRS--DPALLKSLRSQKIIYICCGEDHTAAL 257

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGV 289
           T  G V T G+  +GQLGH        P+ +   E +G++V QIA G  + LA V  +G 
Sbjct: 258 TKEGGVFTFGAGGYGQLGHNSASHEVNPRKV--FELMGNIVTQIACGRQHTLAFVPSSGR 315

Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAIQ 316
           +YSFG G N  LG G   ++  P  ++
Sbjct: 316 IYSFGLGGNGQLGIGSTSNKKSPSMVK 342


>gi|391339113|ref|XP_003743897.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2-like
            [Metaseiulus occidentalis]
          Length = 4496

 Score =  136 bits (343), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 94/320 (29%), Positives = 154/320 (48%), Gaps = 17/320 (5%)

Query: 155  TRINFPSAAHVVQVSASENHAA------FVLQSGQVFTCGD--NSSFCCGHRDTNRPIFR 206
            ++I  P  + V+      N A        V   G+VF CG+  N     GH   +  + +
Sbjct: 2671 SKIKEPKFSEVISNLKPMNIAGGSKSLFIVSHDGKVFACGEGTNGRLGLGH---SHNVAQ 2727

Query: 207  PRLVEALKGVPCKQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP 264
            P+ +  L     K+V   +G      LTI G V + G    G+LGHG+ +    PK +  
Sbjct: 2728 PKPLTDLSPYFIKKVAVHSGGRHALALTIDGRVFSWGEGEDGKLGHGNKISYDRPKLVES 2787

Query: 265  LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH 324
            L+    +  +A G S+  AVT +G +Y++GSG    LGHG+   +L+P+ ++    + + 
Sbjct: 2788 LK-CKRIRDVACGSSHSAAVTSSGELYTWGSGEYGRLGHGDNVPQLKPKQVRALSHERVV 2846

Query: 325  VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARK 384
             V   + D   +AL    +VY+WG G  G LG G     +LP+ + +L S   +QV    
Sbjct: 2847 QVACGSRDAQTLALTERHWVYSWGDGDFGKLGKGGSDGSSLPQNVETLNSQQVIQVECGA 2906

Query: 385  RKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV 444
            + +  L   G V+ +G   +  LG    G    V  P++++ L   +V Q+S G  H + 
Sbjct: 2907 QFSLALSKNGKVWTWGKGDYFRLG---HGSDSHVRWPQVVEELADKNVIQVSVGALHCIA 2963

Query: 445  VTDRGRLFGFGDNERAQLGH 464
            VTDRG ++ +GDN+  Q G+
Sbjct: 2964 VTDRGEVYAWGDNDHGQQGN 2983



 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 98/337 (29%), Positives = 154/337 (45%), Gaps = 9/337 (2%)

Query: 140  GVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRD 199
            G LG G E  +  + T  +  +A   VQ+   E     +   G+V+  G  +    G   
Sbjct: 3630 GQLG-GVEGAKVKTATICDALTALRPVQIVGGEQTLFALTSDGKVYATGYGAGGRLGIGG 3688

Query: 200  TNRPIFRPRLVEALKGVPCKQV--TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRP 257
            T   +  P L+E L+ V   QV   +G      LT  G V + G    G+LGHG      
Sbjct: 3689 TES-VSTPTLIETLQHVIVTQVAVNSGGKHCLALTSSGDVFSWGEGDDGKLGHGSKALCE 3747

Query: 258  TPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQT 317
             PK I  L +   VV +A G ++   +T +G +Y++G G    LGHG+  D+L+P+ ++ 
Sbjct: 3748 RPKLIESLRD-KHVVSVACGGAHSACITASGELYTWGKGRYGRLGHGDSEDQLKPKKVEE 3806

Query: 318  FRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLA 377
                 +  V   +GD   + +   G V++WG G  G LG G       P+ + SL++   
Sbjct: 3807 LAGHNVLDVACGSGDAQTLCVSRDGLVWSWGDGDYGKLGRGGSDGCKFPQKIDSLQNAGV 3866

Query: 378  VQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILD-SLRAHHVSQIS 436
            ++V    + +  L   G VY +G   +  LG    G  D V RP+ +  +L+   V Q++
Sbjct: 3867 IKVECGSQFSVALTAAGVVYTWGKGDYHRLG---HGSEDHVRRPQAVQGALQGKRVIQVA 3923

Query: 437  TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEP 473
             G  H V  TD G +F +GDN+  QLG  +      P
Sbjct: 3924 VGSLHCVACTDSGEVFTWGDNDEGQLGDGSTNAIQRP 3960



 Score =  122 bits (306), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 104/342 (30%), Positives = 159/342 (46%), Gaps = 17/342 (4%)

Query: 114  MQITTGRYHTLLIS-NSSVFSCGSSLCGVLG--HGPETTQCVSFTRINFPSAAHVVQVSA 170
            M I  G     ++S +  VF+CG    G LG  H     Q    T ++ P     V V +
Sbjct: 2688 MNIAGGSKSLFIVSHDGKVFACGEGTNGRLGLGHSHNVAQPKPLTDLS-PYFIKKVAVHS 2746

Query: 171  SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIF-RPRLVEALKGVPCKQVTAGLNFTG 229
               HA  +   G+VF+ G+      GH   N+  + RP+LVE+LK    + V  G + + 
Sbjct: 2747 GGRHALALTIDGRVFSWGEGEDGKLGH--GNKISYDRPKLVESLKCKRIRDVACGSSHSA 2804

Query: 230  FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGP--SYMLAVTGN 287
             +T  G ++T GS  +G+LGHGD + +  PK +  L     VVQ+A G   +  LA+T  
Sbjct: 2805 AVTSSGELYTWGSGEYGRLGHGDNVPQLKPKQVRALSH-ERVVQVACGSRDAQTLALTER 2863

Query: 288  GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 347
              VYS+G G    LG G       P+ ++T   +   V++V  G +  +AL  +G V+TW
Sbjct: 2864 HWVYSWGDGDFGKLGKGGSDGSSLPQNVETLNSQ--QVIQVECGAQFSLALSKNGKVWTW 2921

Query: 348  GKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSL 407
            GKG    LGHG +     P+ +  L     +QV         + D G VY +G    G  
Sbjct: 2922 GKGDYFRLGHGSDSHVRWPQVVEELADKNVIQVSVGALHCIAVTDRGEVYAWGDNDHGQQ 2981

Query: 408  GFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRG 449
            G  +  V+ K   P I+  L A  ++ ++ G  H+V  +  G
Sbjct: 2982 GNGNTTVNRK---PAIVRGLEA--ITNVACGSSHSVAWSSTG 3018



 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 87/283 (30%), Positives = 145/283 (51%), Gaps = 14/283 (4%)

Query: 166  VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 225
            V V++   H   +  SG VF+ G+      GH  +     RP+L+E+L+      V  G 
Sbjct: 3709 VAVNSGGKHCLALTSSGDVFSWGEGDDGKLGH-GSKALCERPKLIESLRDKHVVSVACGG 3767

Query: 226  NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG--SVVQIA--AGPSYM 281
              +  +T  G ++T G   +G+LGHGD+ D+  PK +   EE+   +V+ +A  +G +  
Sbjct: 3768 AHSACITASGELYTWGKGRYGRLGHGDSEDQLKPKKV---EELAGHNVLDVACGSGDAQT 3824

Query: 282  LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 341
            L V+ +G+V+S+G G    LG G       P+ I + +  G  V++V  G +  VAL ++
Sbjct: 3825 LCVSRDGLVWSWGDGDYGKLGRGGSDGCKFPQKIDSLQNAG--VIKVECGSQFSVALTAA 3882

Query: 342  GYVYTWGKGYCGALGHGDEIDKTLPEPLS-SLKSHLAVQVCARKRKTFVLVDTGSVYGFG 400
            G VYTWGKG    LGHG E     P+ +  +L+    +QV           D+G V+ +G
Sbjct: 3883 GVVYTWGKGDYHRLGHGSEDHVRRPQAVQGALQGKRVIQVAVGSLHCVACTDSGEVFTWG 3942

Query: 401  WMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV 443
                G LG    G ++ + RP+++ SL+   +++++ G  HTV
Sbjct: 3943 DNDEGQLG---DGSTNAIQRPKLVASLKGKKMNRVACGSAHTV 3982



 Score =  108 bits (270), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 86/261 (32%), Positives = 127/261 (48%), Gaps = 7/261 (2%)

Query: 116  ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
            + +G  H L L S+  VFS G    G LGHG +   C     I      HVV V+    H
Sbjct: 3711 VNSGGKHCLALTSSGDVFSWGEGDDGKLGHGSKAL-CERPKLIESLRDKHVVSVACGGAH 3769

Query: 175  AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 234
            +A +  SG+++T G       GH D+   + +P+ VE L G     V  G      L + 
Sbjct: 3770 SACITASGELYTWGKGRYGRLGHGDSEDQL-KPKKVEELAGHNVLDVACGSGDAQTLCVS 3828

Query: 235  --GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
              G V + G   +G+LG G +     P+ I  L+  G V+++  G  + +A+T  GVVY+
Sbjct: 3829 RDGLVWSWGDGDYGKLGRGGSDGCKFPQKIDSLQNAG-VIKVECGSQFSVALTAAGVVYT 3887

Query: 293  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 352
            +G G    LGHG +    +P+A+Q    +G  V++V+ G  H VA   SG V+TWG    
Sbjct: 3888 WGKGDYHRLGHGSEDHVRRPQAVQG-ALQGKRVIQVAVGSLHCVACTDSGEVFTWGDNDE 3946

Query: 353  GALGHGDEIDKTLPEPLSSLK 373
            G LG G       P+ ++SLK
Sbjct: 3947 GQLGDGSTNAIQRPKLVASLK 3967



 Score = 92.8 bits (229), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 75/244 (30%), Positives = 120/244 (49%), Gaps = 6/244 (2%)

Query: 235  GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 294
            G +H  G N  GQLG  +     T      L  +  V QI  G   + A+T +G VY+ G
Sbjct: 3619 GVIHGWGHNHRGQLGGVEGAKVKTATICDALTALRPV-QIVGGEQTLFALTSDGKVYATG 3677

Query: 295  SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGA 354
             G+   LG G       P  I+T +   +  V V++G +H +AL SSG V++WG+G  G 
Sbjct: 3678 YGAGGRLGIGGTESVSTPTLIETLQHVIVTQVAVNSGGKHCLALTSSGDVFSWGEGDDGK 3737

Query: 355  LGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGV 414
            LGHG +     P+ + SL+    V V      +  +  +G +Y +G   +G LG    G 
Sbjct: 3738 LGHGSKALCERPKLIESLRDKHVVSVACGGAHSACITASGELYTWGKGRYGRLG---HGD 3794

Query: 415  SDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLE 472
            S+  L+P+ ++ L  H+V  ++  +G   T+ V+  G ++ +GD +  +LG     GC  
Sbjct: 3795 SEDQLKPKKVEELAGHNVLDVACGSGDAQTLCVSRDGLVWSWGDGDYGKLGRGGSDGCKF 3854

Query: 473  PTEI 476
            P +I
Sbjct: 3855 PQKI 3858



 Score = 92.0 bits (227), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 69/237 (29%), Positives = 113/237 (47%), Gaps = 12/237 (5%)

Query: 232  TIRGHVHTCGSNTHGQLG--HGDTLDRPT-PKSIAPLEEVGSVVQIAAGPSYMLAVTGNG 288
             I   V   G N   QLG   G  +  P   + I+ L+ +     IA G   +  V+ +G
Sbjct: 2649 NIECKVFVWGLNDKDQLGGLKGSKIKEPKFSEVISNLKPMN----IAGGSKSLFIVSHDG 2704

Query: 289  VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 348
             V++ G G+N  LG G  H+  QP+ +       I  V V +G  H +AL   G V++WG
Sbjct: 2705 KVFACGEGTNGRLGLGHSHNVAQPKPLTDLSPYFIKKVAVHSGGRHALALTIDGRVFSWG 2764

Query: 349  KGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLG 408
            +G  G LGHG++I    P+ + SLK      V      +  +  +G +Y +G   +G LG
Sbjct: 2765 EGEDGKLGHGNKISYDRPKLVESLKCKRIRDVACGSSHSAAVTSSGELYTWGSGEYGRLG 2824

Query: 409  FPDRGVSDKVLRPRILDSLRAHHVSQISTGLY--HTVVVTDRGRLFGFGDNERAQLG 463
                G +   L+P+ + +L    V Q++ G     T+ +T+R  ++ +GD +  +LG
Sbjct: 2825 ---HGDNVPQLKPKQVRALSHERVVQVACGSRDAQTLALTERHWVYSWGDGDFGKLG 2878



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 55/225 (24%), Positives = 105/225 (46%), Gaps = 6/225 (2%)

Query: 119  GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAF- 177
            G +   + ++  +++ G    G LGHG    Q +   ++   +  +V+ V+     A   
Sbjct: 3767 GAHSACITASGELYTWGKGRYGRLGHGDSEDQ-LKPKKVEELAGHNVLDVACGSGDAQTL 3825

Query: 178  -VLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
             V + G V++ GD      G   ++   F P+ +++L+     +V  G  F+  LT  G 
Sbjct: 3826 CVSRDGLVWSWGDGDYGKLGRGGSDGCKF-PQKIDSLQNAGVIKVECGSQFSVALTAAGV 3884

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 296
            V+T G   + +LGHG       P+++    +   V+Q+A G  + +A T +G V+++G  
Sbjct: 3885 VYTWGKGDYHRLGHGSEDHVRRPQAVQGALQGKRVIQVAVGSLHCVACTDSGEVFTWGDN 3944

Query: 297  SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 341
                LG G  +   +P+ + +   KG  + RV+ G  H V+  +S
Sbjct: 3945 DEGQLGDGSTNAIQRPKLVASL--KGKKMNRVACGSAHTVSWSTS 3987


>gi|158286478|ref|XP_001688080.1| AGAP006994-PB [Anopheles gambiae str. PEST]
 gi|157020487|gb|EDO64729.1| AGAP006994-PB [Anopheles gambiae str. PEST]
          Length = 1060

 Score =  136 bits (342), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 105/343 (30%), Positives = 168/343 (48%), Gaps = 15/343 (4%)

Query: 130 SVFSCGSSLCGVLGHG-PETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCG 188
           +++  G++  G LG G  E  Q +   ++++  A  VV+V    +H  F+ + G+++ CG
Sbjct: 2   AIYCWGNTAHGELGLGGIEEEQVMVPRKMDWSQADEVVRVECGTSHTLFLTKEGKMYACG 61

Query: 189 DNSSFCCGHRDTNRPIFRPRL-----VEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 243
           +N     GH     P  RPR+     + +L+      ++ G   +  LT  G V + GSN
Sbjct: 62  NNDHGQLGHDLDTLPNKRPRMSRFKRLTSLENYIITCISCGTAHSLALTNWGQVFSWGSN 121

Query: 244 THGQLGH-GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLG 302
             GQLGH  +   +PTP+ I  +     VVQIA+G  + LA+T NG +Y++GS S   LG
Sbjct: 122 AVGQLGHDAENGRQPTPRMIKAI-GAKHVVQIASGQYHCLALTNNGELYAWGSNSYGQLG 180

Query: 303 HGEQHDEL-QPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEI 361
            G   +++  P  IQ+    G+ +  ++ G  H  A+  SG ++ WGK   G LG  D  
Sbjct: 181 IGTTSEKVPMPTLIQSL--AGVPIAFIACGGNHSFAVSKSGAIFGWGKNTFGQLGLNDLN 238

Query: 362 DKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRP 421
            +  P  L +L+S     +      +  L + G V+  G   FG LG    G     + P
Sbjct: 239 SRCYPTQLRTLRSLGVRYISCGDDFSVFLTNEGGVFTCGAGTFGQLG---HGSCSNEIVP 295

Query: 422 RILDSLRAHHVSQISTGLYHTVV-VTDRGRLFGFGDNERAQLG 463
           R +  L    ++QI+ G  HT+  V  RG+++GFG     QLG
Sbjct: 296 RKVFELMGSKITQIACGRRHTLAFVPSRGKIYGFGLGGVGQLG 338



 Score =  118 bits (296), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 89/303 (29%), Positives = 146/303 (48%), Gaps = 11/303 (3%)

Query: 114 MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPET-----TQCVSFTRINFPSAAHVVQ 167
           +++  G  HTL ++    +++CG++  G LGH  +T      +   F R+       +  
Sbjct: 39  VRVECGTSHTLFLTKEGKMYACGNNDHGQLGHDLDTLPNKRPRMSRFKRLTSLENYIITC 98

Query: 168 VSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF 227
           +S    H+  +   GQVF+ G N+    GH   N     PR+++A+      Q+ +G   
Sbjct: 99  ISCGTAHSLALTNWGQVFSWGSNAVGQLGHDAENGRQPTPRMIKAIGAKHVVQIASGQYH 158

Query: 228 TGFLTIRGHVHTCGSNTHGQLGHGDTLDR-PTPKSIAPLEEVGSVVQIAAGPSYMLAVTG 286
              LT  G ++  GSN++GQLG G T ++ P P  I  L  V  +  IA G ++  AV+ 
Sbjct: 159 CLALTNNGELYAWGSNSYGQLGIGTTSEKVPMPTLIQSLAGV-PIAFIACGGNHSFAVSK 217

Query: 287 NGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYT 346
           +G ++ +G  +   LG  + +    P  ++T R  G+  +  S GD+  V L + G V+T
Sbjct: 218 SGAIFGWGKNTFGQLGLNDLNSRCYPTQLRTLRSLGVRYI--SCGDDFSVFLTNEGGVFT 275

Query: 347 WGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDT-GSVYGFGWMGFG 405
            G G  G LGHG   ++ +P  +  L      Q+   +R T   V + G +YGFG  G G
Sbjct: 276 CGAGTFGQLGHGSCSNEIVPRKVFELMGSKITQIACGRRHTLAFVPSRGKIYGFGLGGVG 335

Query: 406 SLG 408
            LG
Sbjct: 336 QLG 338



 Score =  118 bits (295), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 90/282 (31%), Positives = 140/282 (49%), Gaps = 14/282 (4%)

Query: 204 IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHG-DTLDRPTP--- 259
           +  PR ++  +     +V  G + T FLT  G ++ CG+N HGQLGH  DTL    P   
Sbjct: 24  VMVPRKMDWSQADEVVRVECGTSHTLFLTKEGKMYACGNNDHGQLGHDLDTLPNKRPRMS 83

Query: 260 --KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH-GEQHDELQPRAIQ 316
             K +  LE    +  I+ G ++ LA+T  G V+S+GS +   LGH  E   +  PR I+
Sbjct: 84  RFKRLTSLENY-IITCISCGTAHSLALTNWGQVFSWGSNAVGQLGHDAENGRQPTPRMIK 142

Query: 317 TFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKT-LPEPLSSLKSH 375
               K  HVV++++G  H +AL ++G +Y WG    G LG G   +K  +P  + SL   
Sbjct: 143 AIGAK--HVVQIASGQYHCLALTNNGELYAWGSNSYGQLGIGTTSEKVPMPTLIQSLAGV 200

Query: 376 LAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQI 435
               +      +F +  +G+++G+G   FG LG  D    +    P  L +LR+  V  I
Sbjct: 201 PIAFIACGGNHSFAVSKSGAIFGWGKNTFGQLGLNDL---NSRCYPTQLRTLRSLGVRYI 257

Query: 436 STGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF 477
           S G   +V +T+ G +F  G     QLGH +    + P ++F
Sbjct: 258 SCGDDFSVFLTNEGGVFTCGAGTFGQLGHGSCSNEIVPRKVF 299



 Score =  111 bits (277), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 78/245 (31%), Positives = 125/245 (51%), Gaps = 5/245 (2%)

Query: 116 ITTGRYHTLLISN-SSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           I+ G  H+L ++N   VFS GS+  G LGH  E  +  +   I    A HVVQ+++ + H
Sbjct: 99  ISCGTAHSLALTNWGQVFSWGSNAVGQLGHDAENGRQPTPRMIKAIGAKHVVQIASGQYH 158

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 234
              +  +G+++  G NS    G   T+  +  P L+++L GVP   +  G N +  ++  
Sbjct: 159 CLALTNNGELYAWGSNSYGQLGIGTTSEKVPMPTLIQSLAGVPIAFIACGGNHSFAVSKS 218

Query: 235 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 294
           G +   G NT GQLG  D   R  P  +  L  +G V  I+ G  + + +T  G V++ G
Sbjct: 219 GAIFGWGKNTFGQLGLNDLNSRCYPTQLRTLRSLG-VRYISCGDDFSVFLTNEGGVFTCG 277

Query: 295 SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA-LDSSGYVYTWGKGYCG 353
           +G+   LGHG   +E+ PR +  F   G  + +++ G  H +A + S G +Y +G G  G
Sbjct: 278 AGTFGQLGHGSCSNEIVPRKV--FELMGSKITQIACGRRHTLAFVPSRGKIYGFGLGGVG 335

Query: 354 ALGHG 358
            LG G
Sbjct: 336 QLGIG 340



 Score = 92.4 bits (228), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 68/248 (27%), Positives = 120/248 (48%), Gaps = 12/248 (4%)

Query: 237 VHTCGSNTHGQLGHGDTLDRPT--PKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 294
           ++  G+  HG+LG G   +     P+ +    +   VV++  G S+ L +T  G +Y+ G
Sbjct: 3   IYCWGNTAHGELGLGGIEEEQVMVPRKM-DWSQADEVVRVECGTSHTLFLTKEGKMYACG 61

Query: 295 SGSNFCLGHG-EQHDELQPRAIQTFRR----KGIHVVRVSAGDEHVVALDSSGYVYTWGK 349
           +  +  LGH  +     +PR +  F+R    +   +  +S G  H +AL + G V++WG 
Sbjct: 62  NNDHGQLGHDLDTLPNKRPR-MSRFKRLTSLENYIITCISCGTAHSLALTNWGQVFSWGS 120

Query: 350 GYCGALGHGDEIDKT-LPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLG 408
              G LGH  E  +   P  + ++ +   VQ+ + +     L + G +Y +G   +G LG
Sbjct: 121 NAVGQLGHDAENGRQPTPRMIKAIGAKHVVQIASGQYHCLALTNNGELYAWGSNSYGQLG 180

Query: 409 FPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLR 468
                 S+KV  P ++ SL    ++ I+ G  H+  V+  G +FG+G N   QLG + L 
Sbjct: 181 IGT--TSEKVPMPTLIQSLAGVPIAFIACGGNHSFAVSKSGAIFGWGKNTFGQLGLNDLN 238

Query: 469 GCLEPTEI 476
               PT++
Sbjct: 239 SRCYPTQL 246



 Score = 49.3 bits (116), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 43/149 (28%), Positives = 67/149 (44%), Gaps = 4/149 (2%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           I  G  H+  +S S ++F  G +  G LG     ++C   T++    +  V  +S  ++ 
Sbjct: 205 IACGGNHSFAVSKSGAIFGWGKNTFGQLGLNDLNSRCYP-TQLRTLRSLGVRYISCGDDF 263

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFT-GFLTI 233
           + F+   G VFTCG  +    GH   +  I  PR V  L G    Q+  G   T  F+  
Sbjct: 264 SVFLTNEGGVFTCGAGTFGQLGHGSCSNEIV-PRKVFELMGSKITQIACGRRHTLAFVPS 322

Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPTPKSI 262
           RG ++  G    GQLG G   +  TP+ +
Sbjct: 323 RGKIYGFGLGGVGQLGIGMVGNHSTPQIV 351


>gi|224055315|ref|XP_002298476.1| predicted protein [Populus trichocarpa]
 gi|222845734|gb|EEE83281.1| predicted protein [Populus trichocarpa]
          Length = 1109

 Score =  136 bits (342), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 99/315 (31%), Positives = 153/315 (48%), Gaps = 22/315 (6%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V  ++    HAA V + G++F+ G+ S    GH   +  +  P+L+EAL     + V  G
Sbjct: 317 VQNIACGGQHAALVTKQGEIFSWGEESGGRLGH-GVDSDVLHPQLIEALSNTNIEFVACG 375

Query: 225 LNFTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSI-APLEEVGSVVQIAAGPSYM 281
              T  +T+ G ++T G  T+  G LGHG+ +    PK +  PLE +  V  I+ GP + 
Sbjct: 376 EYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGI-HVSSISCGPWHT 434

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL--- 338
             V+  G +++FG G+   LGHG++     PR +++   KG+  V+ + G  H  A+   
Sbjct: 435 AVVSSAGQLFTFGDGTFGVLGHGDRKSISLPREVESL--KGLRTVQAACGVWHTAAVVEV 492

Query: 339 ---------DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFV 389
                     SSG ++TWG G  G LGHGD+  K +P  +S+L      QV      T  
Sbjct: 493 MVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVSALVEPNFCQVACGHSLTIA 552

Query: 390 LVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRG 449
              +G VY  G   +G LG P    SD  L  R+   L    V +I+ G YH  V+T + 
Sbjct: 553 RTTSGHVYTMGSPVYGQLGNPQ---SDGKLPARVEGKLSRSSVEEIACGAYHVAVLTSKT 609

Query: 450 RLFGFGDNERAQLGH 464
            ++ +G     +LGH
Sbjct: 610 EVYTWGKGANGRLGH 624



 Score =  122 bits (305), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 99/291 (34%), Positives = 136/291 (46%), Gaps = 22/291 (7%)

Query: 100 VEHSSDIVETSAGNMQ-ITTGRYHTLLISNSS---VFSCGSSLCGVLGHGPETTQCVSFT 155
           V H   I   S  N++ +  G YHT  ++ S     +  G+   G+LGHG E +  V   
Sbjct: 355 VLHPQLIEALSNTNIEFVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVP-K 413

Query: 156 RINFP-SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALK 214
           R+N P    HV  +S    H A V  +GQ+FT GD +    GH D  + I  PR VE+LK
Sbjct: 414 RVNGPLEGIHVSSISCGPWHTAVVSSAGQLFTFGDGTFGVLGHGD-RKSISLPREVESLK 472

Query: 215 GVPCKQVTAGLNFTGFLT------------IRGHVHTCGSNTHGQLGHGDTLDRPTPKSI 262
           G+   Q   G+  T  +               G + T G    G+LGHGD   +  P  +
Sbjct: 473 GLRTVQAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCV 532

Query: 263 APLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKG 322
           + L E  +  Q+A G S  +A T +G VY+ GS     LG+ +   +L  R      R  
Sbjct: 533 SALVEP-NFCQVACGHSLTIARTTSGHVYTMGSPVYGQLGNPQSDGKLPARVEGKLSRSS 591

Query: 323 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
           +    ++ G  HV  L S   VYTWGKG  G LGHGD  DK LP  + +LK
Sbjct: 592 VE--EIACGAYHVAVLTSKTEVYTWGKGANGRLGHGDTDDKNLPSLVEALK 640



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 77/242 (31%), Positives = 113/242 (46%), Gaps = 27/242 (11%)

Query: 251 GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDEL 310
           G  +D   PK++     V  V  IA G  +   VT  G ++S+G  S   LGHG   D L
Sbjct: 298 GVKMDSLLPKALESAV-VLDVQNIACGGQHAALVTKQGEIFSWGEESGGRLGHGVDSDVL 356

Query: 311 QPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC--GALGHGDEIDKTLPE- 367
            P+ I+      I  V  + G+ H  A+  SG +YTWG G    G LGHG+E+   +P+ 
Sbjct: 357 HPQLIEALSNTNIEFV--ACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKR 414

Query: 368 ---PLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRIL 424
              PL  +  H++   C     T V+   G ++ FG   FG LG  DR     +  PR +
Sbjct: 415 VNGPLEGI--HVSSISCG-PWHTAVVSSAGQLFTFGDGTFGVLGHGDR---KSISLPREV 468

Query: 425 DSLRAHHVSQISTGLYHTVVVTD------------RGRLFGFGDNERAQLGHDTLRGCLE 472
           +SL+     Q + G++HT  V +             G+LF +GD ++ +LGH      L 
Sbjct: 469 ESLKGLRTVQAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLV 528

Query: 473 PT 474
           PT
Sbjct: 529 PT 530



 Score = 92.8 bits (229), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 78/279 (27%), Positives = 128/279 (45%), Gaps = 19/279 (6%)

Query: 207 PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 266
           P+ +E+   +  + +  G      +T +G + + G  + G+LGHG   D   P+ I  L 
Sbjct: 306 PKALESAVVLDVQNIACGGQHAALVTKQGEIFSWGEESGGRLGHGVDSDVLHPQLIEALS 365

Query: 267 EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS-NF-CLGHGEQHDELQPRAIQTFRRKGIH 324
              ++  +A G  +  AVT +G +Y++G G+ NF  LGHG +     P+ +     +GIH
Sbjct: 366 NT-NIEFVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNG-PLEGIH 423

Query: 325 VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARK 384
           V  +S G  H   + S+G ++T+G G  G LGHGD    +LP  + SLK    VQ     
Sbjct: 424 VSSISCGPWHTAVVSSAGQLFTFGDGTFGVLGHGDRKSISLPREVESLKGLRTVQAACGV 483

Query: 385 RKTFVLVDT------------GSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHV 432
             T  +V+             G ++ +G    G LG  D+   +  L P  + +L   + 
Sbjct: 484 WHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDK---EAKLVPTCVSALVEPNF 540

Query: 433 SQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCL 471
            Q++ G   T+  T  G ++  G     QLG+    G L
Sbjct: 541 CQVACGHSLTIARTTSGHVYTMGSPVYGQLGNPQSDGKL 579



 Score = 82.0 bits (201), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 68/225 (30%), Positives = 105/225 (46%), Gaps = 18/225 (8%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSASEN 173
           I+ G +HT ++S++  +F+ G    GVLGHG   +  +S  R +        VQ +    
Sbjct: 427 ISCGPWHTAVVSSAGQLFTFGDGTFGVLGHGDRKS--ISLPREVESLKGLRTVQAACGVW 484

Query: 174 HAAFVLQ------------SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQV 221
           H A V++            SG++FT GD      GH D    +  P  V AL      QV
Sbjct: 485 HTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLV-PTCVSALVEPNFCQV 543

Query: 222 TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 281
             G + T   T  GHV+T GS  +GQLG+  + D   P  +       SV +IA G  ++
Sbjct: 544 ACGHSLTIARTTSGHVYTMGSPVYGQLGNPQS-DGKLPARVEGKLSRSSVEEIACGAYHV 602

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVV 326
             +T    VY++G G+N  LGHG+  D+  P  ++  + K +  +
Sbjct: 603 AVLTSKTEVYTWGKGANGRLGHGDTDDKNLPSLVEALKDKQVKSI 647



 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 55/175 (31%), Positives = 86/175 (49%), Gaps = 6/175 (3%)

Query: 304 GEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK 363
           G + D L P+A+++     + V  ++ G +H   +   G +++WG+   G LGHG + D 
Sbjct: 298 GVKMDSLLPKALESAVV--LDVQNIACGGQHAALVTKQGEIFSWGEESGGRLGHGVDSDV 355

Query: 364 TLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVY--GFGWMGFGSLGFPDRGVSDKVLRP 421
             P+ + +L +     V   +  T  +  +G +Y  G G   FG LG  +  VS  V + 
Sbjct: 356 LHPQLIEALSNTNIEFVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNE-VSHWVPK- 413

Query: 422 RILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 476
           R+   L   HVS IS G +HT VV+  G+LF FGD     LGH   +    P E+
Sbjct: 414 RVNGPLEGIHVSSISCGPWHTAVVSSAGQLFTFGDGTFGVLGHGDRKSISLPREV 468



 Score = 43.9 bits (102), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 34/119 (28%), Positives = 58/119 (48%), Gaps = 5/119 (4%)

Query: 122 HTLLISNSS---VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
           H+L I+ ++   V++ GS + G LG+ P++   +        S + V +++    H A +
Sbjct: 547 HSLTIARTTSGHVYTMGSPVYGQLGN-PQSDGKLPARVEGKLSRSSVEEIACGAYHVAVL 605

Query: 179 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHV 237
               +V+T G  ++   GH DT+     P LVEALK    K +  G NFT  + +   V
Sbjct: 606 TSKTEVYTWGKGANGRLGHGDTDDKNL-PSLVEALKDKQVKSIACGTNFTAAICLHKWV 663


>gi|299471207|emb|CBN79063.1| conserved unknown protein [Ectocarpus siliculosus]
          Length = 513

 Score =  136 bits (342), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 97/308 (31%), Positives = 145/308 (47%), Gaps = 17/308 (5%)

Query: 181 SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTC 240
           +G V++ G       G  DTN    RP LV+ALK     QV  G   T  L+  G V+T 
Sbjct: 6   AGLVYSWGRGEDGQLGLGDTNDQD-RPVLVDALKSKGVVQVACGSGHTVVLSEDGAVYTW 64

Query: 241 GSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 300
           G    G+LGHGD   +  P+ +  LE    +VQ   G  +  AVT  G +Y++G G    
Sbjct: 65  GRGDDGRLGHGDNGWKYVPRIVEALEGQ-RIVQATCGSYHTAAVTDKGELYTWGGGMYGK 123

Query: 301 LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGD- 359
           LGHG +     P  ++  R +G  V +++ G  H V L   G VYTWG    G +GH + 
Sbjct: 124 LGHGNESGHPTPCMVKHLRDEGARVTQIACGSRHTVVLTDLGKVYTWGDKENGVVGHTNA 183

Query: 360 EIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVL 419
           +  + LP  L SL++    QV A    T  L   G ++ +G   FG LG    G+    +
Sbjct: 184 DGHQYLPRMLESLQAKTVTQVAACGFHTAALTAAGEIFTWGEGKFGRLG---HGMERNQM 240

Query: 420 RPRILDSLRAHHVSQISTGLYHTVVVTDRGRL-----------FGFGDNERAQLGHDTLR 468
            PR++++L    V  ++ G +H+  + D G L           + FG+ +  +LGH  +R
Sbjct: 241 VPRMVEALMGKRVGHVACGGFHSAAILDSGELYTWGGGEHGQVYTFGNGDHGKLGHGDVR 300

Query: 469 GCLEPTEI 476
               PT +
Sbjct: 301 KVSVPTLV 308



 Score =  128 bits (321), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 81/243 (33%), Positives = 127/243 (52%), Gaps = 7/243 (2%)

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
           + G V++ G    GQLG GDT D+  P  +  L+  G VVQ+A G  + + ++ +G VY+
Sbjct: 5   VAGLVYSWGRGEDGQLGLGDTNDQDRPVLVDALKSKG-VVQVACGSGHTVVLSEDGAVYT 63

Query: 293 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 352
           +G G +  LGHG+   +  PR ++    +G  +V+ + G  H  A+   G +YTWG G  
Sbjct: 64  WGRGDDGRLGHGDNGWKYVPRIVEAL--EGQRIVQATCGSYHTAAVTDKGELYTWGGGMY 121

Query: 353 GALGHGDEIDKTLPEPLSSLKSHLA--VQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFP 410
           G LGHG+E     P  +  L+   A   Q+    R T VL D G VY +G    G +G  
Sbjct: 122 GKLGHGNESGHPTPCMVKHLRDEGARVTQIACGSRHTVVLTDLGKVYTWGDKENGVVGHT 181

Query: 411 DRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGC 470
           +         PR+L+SL+A  V+Q++   +HT  +T  G +F +G+ +  +LGH   R  
Sbjct: 182 N--ADGHQYLPRMLESLQAKTVTQVAACGFHTAALTAAGEIFTWGEGKFGRLGHGMERNQ 239

Query: 471 LEP 473
           + P
Sbjct: 240 MVP 242



 Score =  101 bits (251), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 76/270 (28%), Positives = 126/270 (46%), Gaps = 26/270 (9%)

Query: 83  LNRCNGNWKRVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLISNS-SVFSCGSSLCGV 141
           L   +  WK V R ++++E    +        Q T G YHT  +++   +++ G  + G 
Sbjct: 72  LGHGDNGWKYVPRIVEALEGQRIV--------QATCGSYHTAAVTDKGELYTWGGGMYGK 123

Query: 142 LGHGPET---TQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHR 198
           LGHG E+   T C+   +      A V Q++    H   +   G+V+T GD  +   GH 
Sbjct: 124 LGHGNESGHPTPCM--VKHLRDEGARVTQIACGSRHTVVLTDLGKVYTWGDKENGVVGHT 181

Query: 199 DTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPT 258
           + +   + PR++E+L+     QV A    T  LT  G + T G    G+LGHG   ++  
Sbjct: 182 NADGHQYLPRMLESLQAKTVTQVAACGFHTAALTAAGEIFTWGEGKFGRLGHGMERNQMV 241

Query: 259 PKSIAPL--EEVG--------SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHD 308
           P+ +  L  + VG        S   + +G  Y      +G VY+FG+G +  LGHG+   
Sbjct: 242 PRMVEALMGKRVGHVACGGFHSAAILDSGELYTWGGGEHGQVYTFGNGDHGKLGHGDVRK 301

Query: 309 ELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
              P  +    +  +HVV+V++ +EH  AL
Sbjct: 302 VSVPTLVAGLVK--MHVVKVASYNEHTAAL 329



 Score = 95.1 bits (235), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 85/302 (28%), Positives = 138/302 (45%), Gaps = 22/302 (7%)

Query: 110 SAGNMQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQV 168
           S G +Q+  G  HT+++S + +V++ G    G LGHG    + V    +       +VQ 
Sbjct: 39  SKGVVQVACGSGHTVVLSEDGAVYTWGRGDDGRLGHGDNGWKYVPRI-VEALEGQRIVQA 97

Query: 169 SASENHAAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEALK--GVPCKQVTAGL 225
           +    H A V   G+++T G       GH  ++  P   P +V+ L+  G    Q+  G 
Sbjct: 98  TCGSYHTAAVTDKGELYTWGGGMYGKLGHGNESGHPT--PCMVKHLRDEGARVTQIACGS 155

Query: 226 NFTGFLTIRGHVHTCGSNTHGQLGHGDTLD-RPTPKSIAPLEEVGSVVQIAAGPSYMLAV 284
             T  LT  G V+T G   +G +GH +    +  P+ +  L+   +V Q+AA   +  A+
Sbjct: 156 RHTVVLTDLGKVYTWGDKENGVVGHTNADGHQYLPRMLESLQ-AKTVTQVAACGFHTAAL 214

Query: 285 TGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           T  G ++++G G    LGHG + +++ PR ++     G  V  V+ G  H  A+  SG +
Sbjct: 215 TAAGEIFTWGEGKFGRLGHGMERNQMVPRMVEAL--MGKRVGHVACGGFHSAAILDSGEL 272

Query: 345 YTWG-----------KGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDT 393
           YTWG            G  G LGHGD    ++P  ++ L     V+V +    T  L   
Sbjct: 273 YTWGGGEHGQVYTFGNGDHGKLGHGDVRKVSVPTLVAGLVKMHVVKVASYNEHTAALAGA 332

Query: 394 GS 395
            S
Sbjct: 333 SS 334


>gi|147900291|ref|NP_001086738.1| HECT and RLD domain containing E3 ubiquitin protein ligase 4
           [Xenopus laevis]
 gi|83405253|gb|AAI10973.1| MGC81587 protein [Xenopus laevis]
          Length = 897

 Score =  135 bits (341), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 102/311 (32%), Positives = 148/311 (47%), Gaps = 12/311 (3%)

Query: 156 RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 215
           R +F    +V  V     H  FVL  G V+TCG N     GH  + +   +P  V AL  
Sbjct: 27  RCDFFINKNVRDVGCGNRHTGFVLDDGTVYTCGCNDLGQLGHDKSRK---KPEQVGALDA 83

Query: 216 VPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDR-PTPKSIAPLEEVGSVVQI 274
                V+ G   T  L  +G V + G   HGQ+G     D    P++I  L ++  +VQ+
Sbjct: 84  QIIVAVSCGEAHTLALNDKGQVFSWGHAAHGQIGVSIAEDYIRVPRNIKSLSDI-QIVQV 142

Query: 275 AAGPSYMLAVTGNGVVYSFGSGSNFCLGHG-EQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           A G  + LA++    +YS+G      LG G E+  E  PR I++    GI    ++AG  
Sbjct: 143 ACGHHHSLALSKESNIYSWGQNQYGQLGLGSEKRKESAPRHIKSL--SGIPFAHIAAGGG 200

Query: 334 HVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDT 393
           H  AL  SG ++ WG+   G LG  DE D++ P  L SL+S   + +C  +  T  L   
Sbjct: 201 HSFALTISGAIFGWGRNKFGQLGLNDETDRSDPALLKSLRSQKIIYICCGEDHTAALTKE 260

Query: 394 GSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV-VTDRGRLF 452
           G V+ FG  G+G LG      +   + PR +  L  + V+QI+ G  HT+  V   GR++
Sbjct: 261 GGVFTFGAGGYGQLG---HNSASHEVNPRKVFELMGNIVTQIACGRQHTLAFVPSSGRIY 317

Query: 453 GFGDNERAQLG 463
            FG     QLG
Sbjct: 318 SFGLGGNGQLG 328



 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 85/276 (30%), Positives = 137/276 (49%), Gaps = 10/276 (3%)

Query: 204 IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 263
           +  PR  +       + V  G   TGF+   G V+TCG N  GQLGH  +  R  P+ + 
Sbjct: 22  VIEPRRCDFFINKNVRDVGCGNRHTGFVLDDGTVYTCGCNDLGQLGHDKS--RKKPEQVG 79

Query: 264 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQ-PRAIQTFRRKG 322
            L+    +V ++ G ++ LA+   G V+S+G  ++  +G     D ++ PR I++     
Sbjct: 80  ALD-AQIIVAVSCGEAHTLALNDKGQVFSWGHAAHGQIGVSIAEDYIRVPRNIKSL--SD 136

Query: 323 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK-TLPEPLSSLKSHLAVQVC 381
           I +V+V+ G  H +AL     +Y+WG+   G LG G E  K + P  + SL       + 
Sbjct: 137 IQIVQVACGHHHSLALSKESNIYSWGQNQYGQLGLGSEKRKESAPRHIKSLSGIPFAHIA 196

Query: 382 ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYH 441
           A    +F L  +G+++G+G   FG LG  D   +D+   P +L SLR+  +  I  G  H
Sbjct: 197 AGGGHSFALTISGAIFGWGRNKFGQLGLNDE--TDRS-DPALLKSLRSQKIIYICCGEDH 253

Query: 442 TVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF 477
           T  +T  G +F FG     QLGH++    + P ++F
Sbjct: 254 TAALTKEGGVFTFGAGGYGQLGHNSASHEVNPRKVF 289



 Score =  104 bits (260), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 80/294 (27%), Positives = 136/294 (46%), Gaps = 9/294 (3%)

Query: 119 GRYHT-LLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAF 177
           G  HT  ++ + +V++CG +  G LGH     +     ++    A  +V VS  E H   
Sbjct: 42  GNRHTGFVLDDGTVYTCGCNDLGQLGHDKSRKKP---EQVGALDAQIIVAVSCGEAHTLA 98

Query: 178 VLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHV 237
           +   GQVF+ G  +    G       I  PR +++L  +   QV  G + +  L+   ++
Sbjct: 99  LNDKGQVFSWGHAAHGQIGVSIAEDYIRVPRNIKSLSDIQIVQVACGHHHSLALSKESNI 158

Query: 238 HTCGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 296
           ++ G N +GQLG G +      P+ I  L  +     IAAG  +  A+T +G ++ +G  
Sbjct: 159 YSWGQNQYGQLGLGSEKRKESAPRHIKSLSGI-PFAHIAAGGGHSFALTISGAIFGWGRN 217

Query: 297 SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 356
               LG  ++ D   P  +++ R + I  + +  G++H  AL   G V+T+G G  G LG
Sbjct: 218 KFGQLGLNDETDRSDPALLKSLRSQKI--IYICCGEDHTAALTKEGGVFTFGAGGYGQLG 275

Query: 357 HGDEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLGF 409
           H     +  P  +  L  ++  Q+ C R+     +  +G +Y FG  G G LG 
Sbjct: 276 HNSASHEVNPRKVFELMGNIVTQIACGRQHTLAFVPSSGRIYSFGLGGNGQLGI 329



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 75/253 (29%), Positives = 118/253 (46%), Gaps = 5/253 (1%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           ++ G  HTL +++   VFS G +  G +G             I   S   +VQV+   +H
Sbjct: 89  VSCGEAHTLALNDKGQVFSWGHAAHGQIGVSIAEDYIRVPRNIKSLSDIQIVQVACGHHH 148

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 234
           +  + +   +++ G N     G     R    PR +++L G+P   + AG   +  LTI 
Sbjct: 149 SLALSKESNIYSWGQNQYGQLGLGSEKRKESAPRHIKSLSGIPFAHIAAGGGHSFALTIS 208

Query: 235 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 294
           G +   G N  GQLG  D  DR  P  +  L     ++ I  G  +  A+T  G V++FG
Sbjct: 209 GAIFGWGRNKFGQLGLNDETDRSDPALLKSLRS-QKIIYICCGEDHTAALTKEGGVFTFG 267

Query: 295 SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA-LDSSGYVYTWGKGYCG 353
           +G    LGH     E+ PR +  F   G  V +++ G +H +A + SSG +Y++G G  G
Sbjct: 268 AGGYGQLGHNSASHEVNPRKV--FELMGNIVTQIACGRQHTLAFVPSSGRIYSFGLGGNG 325

Query: 354 ALGHGDEIDKTLP 366
            LG G   +K  P
Sbjct: 326 QLGIGSTSNKKSP 338



 Score = 74.7 bits (182), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 68/227 (29%), Positives = 110/227 (48%), Gaps = 13/227 (5%)

Query: 94  LRFLQSVEHSSDIVETSAGNMQITTGRYHTLLISN-SSVFSCGSSLCGVLGHGPETTQCV 152
           +R  ++++  SDI       +Q+  G +H+L +S  S+++S G +  G LG G E  +  
Sbjct: 125 IRVPRNIKSLSDI-----QIVQVACGHHHSLALSKESNIYSWGQNQYGQLGLGSEKRKES 179

Query: 153 SFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRD-TNRPIFRPRLVE 211
           +   I   S      ++A   H+  +  SG +F  G N     G  D T+R    P L++
Sbjct: 180 APRHIKSLSGIPFAHIAAGGGHSFALTISGAIFGWGRNKFGQLGLNDETDRS--DPALLK 237

Query: 212 ALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSV 271
           +L+      +  G + T  LT  G V T G+  +GQLGH        P+ +   E +G++
Sbjct: 238 SLRSQKIIYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSASHEVNPRKV--FELMGNI 295

Query: 272 V-QIAAGPSYMLA-VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQ 316
           V QIA G  + LA V  +G +YSFG G N  LG G   ++  P  ++
Sbjct: 296 VTQIACGRQHTLAFVPSSGRIYSFGLGGNGQLGIGSTSNKKSPSMVK 342


>gi|255540989|ref|XP_002511559.1| Ran GTPase binding protein, putative [Ricinus communis]
 gi|223550674|gb|EEF52161.1| Ran GTPase binding protein, putative [Ricinus communis]
          Length = 1028

 Score =  135 bits (341), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 96/321 (29%), Positives = 155/321 (48%), Gaps = 22/321 (6%)

Query: 168 VSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF 227
           ++    HA  V + GQ+F+ G++S    GH   +  + +P++++AL       V  G   
Sbjct: 303 IACGSKHAVIVTKQGQIFSWGESSGGKLGH-GADADVSQPKVIDALSESNVVLVACGEFH 361

Query: 228 TGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 285
           T  +T+ G+++T G +TH  G LGHG  +    P+ +    E   +  ++ GP +  AV+
Sbjct: 362 TCAVTVSGNLYTWGDDTHNTGYLGHGSAVSHWIPREVIGQIESVRISFVSCGPWHTAAVS 421

Query: 286 GNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA-------- 337
             G +++FG G+   LGHG++    +PR +++   KG+  ++VS G  H  A        
Sbjct: 422 SQGKLFTFGDGTFGALGHGDRSSTSKPREVESL--KGLRTLKVSCGIWHTAAVIDFINES 479

Query: 338 --LDSS--GYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDT 393
             LD+S  G ++TWG G  G LGHGDE  + +P  +S        QV      T  L   
Sbjct: 480 DRLDTSLSGKLFTWGAGERGQLGHGDEEPRLVPSCVSMPAG--VCQVACAHSMTIALTVL 537

Query: 394 GSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFG 453
           G VY  G   +G LG P    S   L       +R  H+ QI+ G +H V ++  G ++ 
Sbjct: 538 GQVYTMGAADYGQLGSP---CSVGKLPIHTDGDIRNCHIKQIACGSHHVVALSSNGDVYT 594

Query: 454 FGDNERAQLGHDTLRGCLEPT 474
           +G     QLGH  ++    PT
Sbjct: 595 WGKGINGQLGHGDIKDRHTPT 615



 Score =  108 bits (271), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 86/273 (31%), Positives = 129/273 (47%), Gaps = 21/273 (7%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSL--CGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +  G +HT  ++ S ++++ G      G LGHG   +  +    I    +  +  VS   
Sbjct: 355 VACGEFHTCAVTVSGNLYTWGDDTHNTGYLGHGSAVSHWIPREVIGQIESVRISFVSCGP 414

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL- 231
            H A V   G++FT GD +    GH D +    +PR VE+LKG+   +V+ G+  T  + 
Sbjct: 415 WHTAAVSSQGKLFTFGDGTFGALGHGDRSS-TSKPREVESLKGLRTLKVSCGIWHTAAVI 473

Query: 232 -----------TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 280
                      ++ G + T G+   GQLGHGD   R  P  ++       V Q+A   S 
Sbjct: 474 DFINESDRLDTSLSGKLFTWGAGERGQLGHGDEEPRLVPSCVS---MPAGVCQVACAHSM 530

Query: 281 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 340
            +A+T  G VY+ G+     LG      +L        R    H+ +++ G  HVVAL S
Sbjct: 531 TIALTVLGQVYTMGAADYGQLGSPCSVGKLPIHTDGDIR--NCHIKQIACGSHHVVALSS 588

Query: 341 SGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
           +G VYTWGKG  G LGHGD  D+  P  + +LK
Sbjct: 589 NGDVYTWGKGINGQLGHGDIKDRHTPTLVKALK 621



 Score = 92.0 bits (227), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 77/282 (27%), Positives = 130/282 (46%), Gaps = 30/282 (10%)

Query: 203 PIFR-----PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRP 257
           PI R     P+ ++ +  +  + +  G      +T +G + + G ++ G+LGHG   D  
Sbjct: 280 PIMRMDALLPKALDRIAALDAQIIACGSKHAVIVTKQGQIFSWGESSGGKLGHGADADVS 339

Query: 258 TPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC--LGHGEQHDELQPRAI 315
            PK I  L E  +VV +A G  +  AVT +G +Y++G  ++    LGHG       PR +
Sbjct: 340 QPKVIDALSE-SNVVLVACGEFHTCAVTVSGNLYTWGDDTHNTGYLGHGSAVSHWIPREV 398

Query: 316 QTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSH 375
              + + + +  VS G  H  A+ S G ++T+G G  GALGHGD    + P  + SLK  
Sbjct: 399 -IGQIESVRISFVSCGPWHTAAVSSQGKLFTFGDGTFGALGHGDRSSTSKPREVESLKGL 457

Query: 376 LAVQVCARKRKTFVLVD------------TGSVYGFGWMGFGSLGFPDRGVSDKVLRPRI 423
             ++V      T  ++D            +G ++ +G    G LG  D         PR+
Sbjct: 458 RTLKVSCGIWHTAAVIDFINESDRLDTSLSGKLFTWGAGERGQLGHGDE-------EPRL 510

Query: 424 LDSLRAHH--VSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 463
           + S  +    V Q++     T+ +T  G+++  G  +  QLG
Sbjct: 511 VPSCVSMPAGVCQVACAHSMTIALTVLGQVYTMGAADYGQLG 552



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 58/210 (27%), Positives = 96/210 (45%), Gaps = 26/210 (12%)

Query: 284 VTGNGVVYSFGSG-SNFCLGHGE---------QHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           V G G V   G G SN  LG            + D L P+A+   R   +    ++ G +
Sbjct: 251 VDGPGDVLFLGEGISNLPLGGNMYDVKSSPIMRMDALLPKALD--RIAALDAQIIACGSK 308

Query: 334 HVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDT 393
           H V +   G +++WG+   G LGHG + D + P+ + +L     V V   +  T  +  +
Sbjct: 309 HAVIVTKQGQIFSWGESSGGKLGHGADADVSQPKVIDALSESNVVLVACGEFHTCAVTVS 368

Query: 394 GSVYGF-------GWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT 446
           G++Y +       G++G GS       VS  + R  ++  + +  +S +S G +HT  V+
Sbjct: 369 GNLYTWGDDTHNTGYLGHGS------AVSHWIPR-EVIGQIESVRISFVSCGPWHTAAVS 421

Query: 447 DRGRLFGFGDNERAQLGHDTLRGCLEPTEI 476
            +G+LF FGD     LGH       +P E+
Sbjct: 422 SQGKLFTFGDGTFGALGHGDRSSTSKPREV 451


>gi|320163091|gb|EFW39990.1| chromosome condensation regulator RCC1 [Capsaspora owczarzaki ATCC
           30864]
          Length = 1230

 Score =  135 bits (341), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 119/389 (30%), Positives = 174/389 (44%), Gaps = 49/389 (12%)

Query: 116 ITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHA 175
           I  GR HTL + +  V+SCGS+  G LGH    ++     R++      + Q++  E H+
Sbjct: 129 IACGRAHTLFLVDGQVYSCGSNDQGQLGHKKHRSKP---ERVDALEPYTITQIACGETHS 185

Query: 176 AFVLQSGQVFTCGDNSSFCCG---HRDTNRP----------------------------- 203
             +  +GQVF  GDN +   G      + +P                             
Sbjct: 186 LALTSNGQVFAWGDNKASQLGLTPSESSRQPSTRSSAPKTAAASIDDVDELDAATLAYMD 245

Query: 204 -IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSI 262
            + RPRLV AL G    Q+  G NF+  L+ RG V   G NT GQL   +    P P  +
Sbjct: 246 FMTRPRLVRALTGHKIVQIVCGANFSLVLSERGDVFAWGDNTSGQLCLRELKTVPVPTLV 305

Query: 263 APLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKG 322
             L  +  + Q+AAG  + LA+T NG VYS+G+     LG G+      P  ++T   + 
Sbjct: 306 KELYGI-PIRQLAAGGRHTLALTFNGQVYSWGNNQFGQLGVGDTAPHTIPSRLKTLEHQ- 363

Query: 323 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQV-C 381
                ++ G++H V L  +G VY++G G  G LGHG   ++  P  +  L    A QV C
Sbjct: 364 -FCAHIACGEDHSVVLTETGGVYSFGAGGQGQLGHGTLQNEINPRMIFELMGKSASQVLC 422

Query: 382 ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDK--VLRPRILDSLRAHHVSQISTGL 439
            R+        T  +Y FG  G G LG    GV  +  VL P ++  L A  + +I+TG 
Sbjct: 423 GRRHTIVFFPKTNKIYAFGLGGNGQLG-TGVGVEPQQHVLTPMLVRVLDATPILRIATGA 481

Query: 440 YHT---VVVTDRGRLFGFGDNERAQLGHD 465
             +    VV +R  +   G  E AQL  D
Sbjct: 482 SASHCFAVVGNRNHV---GAAESAQLPWD 507



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 100/346 (28%), Positives = 144/346 (41%), Gaps = 54/346 (15%)

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTNR---PIFRPRLVEALKGVP----CKQVTAGLNF 227
           AA    +G V+  G+ +    G R TN     +  P  +EA   V        +  G   
Sbjct: 76  AAHAQLAGSVWAWGNPTDGQLGLRLTNDHTLAVPEPTELEAFSSVSMSTLASAIACGRAH 135

Query: 228 TGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN 287
           T FL + G V++CGSN  GQLGH     R  P+ +  LE   ++ QIA G ++ LA+T N
Sbjct: 136 TLFL-VDGQVYSCGSNDQGQLGHKK--HRSKPERVDALEPY-TITQIACGETHSLALTSN 191

Query: 288 GVVYSFGSGSNFCLGHGEQH----------------------DEL------------QPR 313
           G V+++G      LG                           DEL            +PR
Sbjct: 192 GQVFAWGDNKASQLGLTPSESSRQPSTRSSAPKTAAASIDDVDELDAATLAYMDFMTRPR 251

Query: 314 AIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEP--LSS 371
            ++     G  +V++  G    + L   G V+ WG    G L   +   KT+P P  +  
Sbjct: 252 LVRAL--TGHKIVQIVCGANFSLVLSERGDVFAWGDNTSGQLCLREL--KTVPVPTLVKE 307

Query: 372 LKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHH 431
           L      Q+ A  R T  L   G VY +G   FG LG  D         P  L +L    
Sbjct: 308 LYGIPIRQLAAGGRHTLALTFNGQVYSWGNNQFGQLGVGDTAPHTI---PSRLKTLEHQF 364

Query: 432 VSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF 477
            + I+ G  H+VV+T+ G ++ FG   + QLGH TL+  + P  IF
Sbjct: 365 CAHIACGEDHSVVLTETGGVYSFGAGGQGQLGHGTLQNEINPRMIF 410


>gi|54261597|gb|AAH84600.1| LOC495281 protein, partial [Xenopus laevis]
          Length = 1031

 Score =  135 bits (341), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 108/343 (31%), Positives = 158/343 (46%), Gaps = 21/343 (6%)

Query: 156 RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 215
           R +F    +V  V     H  FVL  G V+TCG N     GH  + +   +P  V AL  
Sbjct: 11  RCDFFINKNVRDVGCGSRHTVFVLDDGTVYTCGCNDLGQLGHDKSRK---KPDQVGALDA 67

Query: 216 VPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDR-PTPKSIAPLEEVGSVVQI 274
                V+ G   T  L  +G V + G   HGQ+G     D    P++I  L ++  +VQ+
Sbjct: 68  QTIVAVSCGEAHTLALNDKGQVFSWGHAAHGQIGLSVAEDYIRVPRNIKSLYDI-QIVQV 126

Query: 275 AAGPSYMLAVTGNGVVYSFGSGSNFCLGHG-EQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           A G  + LA++    +YS+G      LG G E   E  PR I++    GI    ++AG  
Sbjct: 127 ACGHHHSLALSKESDIYSWGQNQYGQLGLGSEIKKESAPRHIKSL--AGIPFAHIAAGGG 184

Query: 334 HVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDT 393
           H  AL  SG ++ WG+   G LG  DE D++ P  L SL+S   + +C  +  T  L   
Sbjct: 185 HSFALTMSGAIFGWGRNKFGQLGLNDETDRSAPALLKSLRSQKIIHICCGEDHTAALTKE 244

Query: 394 GSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV-VTDRGRLF 452
           G V+ FG  G+G LG      ++  + PR +  L    V+QI+ G  HT+  V   GR++
Sbjct: 245 GGVFTFGAGGYGQLG---HNSTNHEVNPRKVFELMGSIVTQIACGRQHTLAFVPSSGRIY 301

Query: 453 GFGDNERAQLGHD---------TLRGCLEPTEIFIQEMEEDTG 486
            FG     QLG           T++G     E ++Q + E  G
Sbjct: 302 SFGLGGNGQLGTGSTSNRKSPFTVKGNWLTHEDYVQRLPEANG 344



 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 85/276 (30%), Positives = 137/276 (49%), Gaps = 10/276 (3%)

Query: 204 IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 263
           +  PR  +       + V  G   T F+   G V+TCG N  GQLGH  +  R  P  + 
Sbjct: 6   VLEPRRCDFFINKNVRDVGCGSRHTVFVLDDGTVYTCGCNDLGQLGHDKS--RKKPDQVG 63

Query: 264 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQ-PRAIQTFRRKG 322
            L +  ++V ++ G ++ LA+   G V+S+G  ++  +G     D ++ PR I++     
Sbjct: 64  AL-DAQTIVAVSCGEAHTLALNDKGQVFSWGHAAHGQIGLSVAEDYIRVPRNIKSLY--D 120

Query: 323 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK-TLPEPLSSLKSHLAVQVC 381
           I +V+V+ G  H +AL     +Y+WG+   G LG G EI K + P  + SL       + 
Sbjct: 121 IQIVQVACGHHHSLALSKESDIYSWGQNQYGQLGLGSEIKKESAPRHIKSLAGIPFAHIA 180

Query: 382 ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYH 441
           A    +F L  +G+++G+G   FG LG  D   +D+   P +L SLR+  +  I  G  H
Sbjct: 181 AGGGHSFALTMSGAIFGWGRNKFGQLGLNDE--TDRS-APALLKSLRSQKIIHICCGEDH 237

Query: 442 TVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF 477
           T  +T  G +F FG     QLGH++    + P ++F
Sbjct: 238 TAALTKEGGVFTFGAGGYGQLGHNSTNHEVNPRKVF 273



 Score =  105 bits (262), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 78/291 (26%), Positives = 135/291 (46%), Gaps = 8/291 (2%)

Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 179
           R+   ++ + +V++CG +  G LGH     +     ++    A  +V VS  E H   + 
Sbjct: 28  RHTVFVLDDGTVYTCGCNDLGQLGHDKSRKKP---DQVGALDAQTIVAVSCGEAHTLALN 84

Query: 180 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 239
             GQVF+ G  +    G       I  PR +++L  +   QV  G + +  L+    +++
Sbjct: 85  DKGQVFSWGHAAHGQIGLSVAEDYIRVPRNIKSLYDIQIVQVACGHHHSLALSKESDIYS 144

Query: 240 CGSNTHGQLGHGDTLDRPT-PKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
            G N +GQLG G  + + + P+ I  L  +     IAAG  +  A+T +G ++ +G    
Sbjct: 145 WGQNQYGQLGLGSEIKKESAPRHIKSLAGI-PFAHIAAGGGHSFALTMSGAIFGWGRNKF 203

Query: 299 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 358
             LG  ++ D   P  +++ R + I  + +  G++H  AL   G V+T+G G  G LGH 
Sbjct: 204 GQLGLNDETDRSAPALLKSLRSQKI--IHICCGEDHTAALTKEGGVFTFGAGGYGQLGHN 261

Query: 359 DEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLG 408
               +  P  +  L   +  Q+ C R+     +  +G +Y FG  G G LG
Sbjct: 262 STNHEVNPRKVFELMGSIVTQIACGRQHTLAFVPSSGRIYSFGLGGNGQLG 312


>gi|198417628|ref|XP_002119426.1| PREDICTED: hect domain and RLD 2 [Ciona intestinalis]
          Length = 2335

 Score =  135 bits (340), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 95/304 (31%), Positives = 146/304 (48%), Gaps = 12/304 (3%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQ--VT 222
           V QV         V   G+V+ CG+++S   G       +   RL + L   P K+  V 
Sbjct: 465 VTQVIGGSKSLFAVTMGGKVYACGESTSGRLGLGPVTGSV--SRLTQVLFPQPIKKLAVH 522

Query: 223 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 282
           +G      LT  GHV++ G    G+LGHG   D  TP+ I    E   +  I+ G S+  
Sbjct: 523 SGGRHAMALTYDGHVYSWGDGEEGKLGHGSRADALTPRKIETFPE-KCIRDISCGSSHSA 581

Query: 283 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEHVVALDS 340
           A+  +G +Y++G G    LGHG  H  L+P+ +Q     G  VV+V+ G  D   + L  
Sbjct: 582 AIGSSGTLYTWGHGMYGRLGHGNNHTLLKPKPVQAL--SGQQVVQVACGSRDAQTLCLTQ 639

Query: 341 SGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 400
            G VY+WG G  G LG G      +P+P+  L     V++    + +  L   G V+ +G
Sbjct: 640 DGLVYSWGDGDFGKLGRGGSDGCCVPKPVERLSGQDVVKIECGAQFSLALSRCGLVWTWG 699

Query: 401 WMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERA 460
              +  LG    G    V RP++++ LR H V  ++ G  H + VT+ G++F +GDN+  
Sbjct: 700 KGDYFRLG---HGSDQHVRRPQVVEGLREHKVVDVAVGALHCLAVTEGGQVFAWGDNDHG 756

Query: 461 QLGH 464
           Q G+
Sbjct: 757 QQGN 760



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 100/321 (31%), Positives = 154/321 (47%), Gaps = 16/321 (4%)

Query: 131  VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS--ASENHAAFVLQSGQVFTCG 188
            VF+ G    G LG G   +  +  T I      H+ QVS  A   H   +   G+V++ G
Sbjct: 1461 VFATGYGAGGRLGIGSNESVAIP-TLIESIQHVHITQVSVNAGGKHILALSNEGEVYSWG 1519

Query: 189  DNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQL 248
            +      GH + +  +  PR++E+L+G    +V  G + +  +   G ++T G   +G+L
Sbjct: 1520 EGVDGKLGHGNRSS-LDHPRIIESLRGDLIVKVATGGSHSAAINATGGLYTWGKGRYGRL 1578

Query: 249  GHGDTLDRPTPKSIAPLEEVGSVVQIAAG--PSYMLAVT----GNGVVYSFGSGSNFCLG 302
            GH D+ D+  PK +  L++   VV +A G   +  L +T    G+ VV+S+G G    LG
Sbjct: 1579 GHEDSEDQLKPKLVNALKD-NLVVDVACGNGDAQTLCITEGTGGSSVVWSWGDGDYGKLG 1637

Query: 303  HGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEID 362
             G       P  I T    G H+  V+ G +  +AL  +G VYTWGKG    LGHG +  
Sbjct: 1638 RGGSDGCKVPAIIDTLM--GKHITHVACGSQFSLALSKAGGVYTWGKGDYYRLGHGSDEH 1695

Query: 363  KTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPR 422
               P+ + SL+    V+V          VD G VY +G    G +G    G +     PR
Sbjct: 1696 VRRPKLIESLRGMKVVEVSVGSLHCIAAVDNGDVYTWGDNDEGQIG---DGTTQATQIPR 1752

Query: 423  ILDSLRAHHVSQISTGLYHTV 443
            ++ +L+ HH+S +S G  HTV
Sbjct: 1753 LVAALQGHHISHVSCGSAHTV 1773



 Score =  123 bits (308), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 99/361 (27%), Positives = 163/361 (45%), Gaps = 26/361 (7%)

Query: 126  ISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFP----SAAHVVQVSASENHAAFVLQS 181
            + + S+F  G +  G LG GPE  +     +I  P    +A   +Q+   E     V   
Sbjct: 1404 VGSGSIFGWGHNHRGQLG-GPEGAK----VKIPIPCPSLAALKPIQLVGGEQTLFTVTGE 1458

Query: 182  GQVFTCGDNSSFCCGHR---DTNRPIFRPRLVEALKGVPCKQVT--AGLNFTGFLTIRGH 236
            G+VF  G    +  G R    +N  +  P L+E+++ V   QV+  AG      L+  G 
Sbjct: 1459 GKVFATG----YGAGGRLGIGSNESVAIPTLIESIQHVHITQVSVNAGGKHILALSNEGE 1514

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 296
            V++ G    G+LGHG+      P+ I  L     +V++A G S+  A+   G +Y++G G
Sbjct: 1515 VYSWGEGVDGKLGHGNRSSLDHPRIIESLRG-DLIVKVATGGSHSAAINATGGLYTWGKG 1573

Query: 297  SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS----SGYVYTWGKGYC 352
                LGH +  D+L+P+ +   +   +  V    GD   + +      S  V++WG G  
Sbjct: 1574 RYGRLGHEDSEDQLKPKLVNALKDNLVVDVACGNGDAQTLCITEGTGGSSVVWSWGDGDY 1633

Query: 353  GALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDR 412
            G LG G      +P  + +L       V    + +  L   G VY +G   +  LG    
Sbjct: 1634 GKLGRGGSDGCKVPAIIDTLMGKHITHVACGSQFSLALSKAGGVYTWGKGDYYRLG---H 1690

Query: 413  GVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLE 472
            G  + V RP++++SLR   V ++S G  H +   D G ++ +GDN+  Q+G  T +    
Sbjct: 1691 GSDEHVRRPKLIESLRGMKVVEVSVGSLHCIAAVDNGDVYTWGDNDEGQIGDGTTQATQI 1750

Query: 473  P 473
            P
Sbjct: 1751 P 1751



 Score =  119 bits (297), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 88/319 (27%), Positives = 147/319 (46%), Gaps = 9/319 (2%)

Query: 131 VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDN 190
           V++CG S  G LG GP T      T++ FP     + V +   HA  +   G V++ GD 
Sbjct: 484 VYACGESTSGRLGLGPVTGSVSRLTQVLFPQPIKKLAVHSGGRHAMALTYDGHVYSWGDG 543

Query: 191 SSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGH 250
                GH  +      PR +E       + ++ G + +  +   G ++T G   +G+LGH
Sbjct: 544 EEGKLGH-GSRADALTPRKIETFPEKCIRDISCGSSHSAAIGSSGTLYTWGHGMYGRLGH 602

Query: 251 GDTLDRPTPKSIAPLEEVGSVVQIAAGP--SYMLAVTGNGVVYSFGSGSNFCLGHGEQHD 308
           G+      PK +  L     VVQ+A G   +  L +T +G+VYS+G G    LG G    
Sbjct: 603 GNNHTLLKPKPVQALSG-QQVVQVACGSRDAQTLCLTQDGLVYSWGDGDFGKLGRGGSDG 661

Query: 309 ELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEP 368
              P+ ++  R  G  VV++  G +  +AL   G V+TWGKG    LGHG +     P+ 
Sbjct: 662 CCVPKPVE--RLSGQDVVKIECGAQFSLALSRCGLVWTWGKGDYFRLGHGSDQHVRRPQV 719

Query: 369 LSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLR 428
           +  L+ H  V V         + + G V+ +G    G  G     V+ K ++ + L+ ++
Sbjct: 720 VEGLREHKVVDVAVGALHCLAVTEGGQVFAWGDNDHGQQGNGGTTVNRKPMKVQGLEGVK 779

Query: 429 AHHVSQISTGLYHTVVVTD 447
              +++++ G  H++   D
Sbjct: 780 ---ITKLACGSSHSIAFAD 795



 Score =  101 bits (252), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 76/251 (30%), Positives = 124/251 (49%), Gaps = 16/251 (6%)

Query: 235  GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
            G +   G N  GQLG   G  +  P P  S+A L+ +    Q+  G   +  VTG G V+
Sbjct: 1407 GSIFGWGHNHRGQLGGPEGAKVKIPIPCPSLAALKPI----QLVGGEQTLFTVTGEGKVF 1462

Query: 292  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 351
            + G G+   LG G       P  I++ +   I  V V+AG +H++AL + G VY+WG+G 
Sbjct: 1463 ATGYGAGGRLGIGSNESVAIPTLIESIQHVHITQVSVNAGGKHILALSNEGEVYSWGEGV 1522

Query: 352  CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 411
             G LGHG+      P  + SL+  L V+V      +  +  TG +Y +G   +G LG  D
Sbjct: 1523 DGKLGHGNRSSLDHPRIIESLRGDLIVKVATGGSHSAAINATGGLYTWGKGRYGRLGHED 1582

Query: 412  RGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTD----RGRLFGFGDNERAQLGHD 465
               S+  L+P+++++L+ + V  ++   G   T+ +T+       ++ +GD +  +LG  
Sbjct: 1583 ---SEDQLKPKLVNALKDNLVVDVACGNGDAQTLCITEGTGGSSVVWSWGDGDYGKLGRG 1639

Query: 466  TLRGCLEPTEI 476
               GC  P  I
Sbjct: 1640 GSDGCKVPAII 1650



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 81/272 (29%), Positives = 128/272 (47%), Gaps = 16/272 (5%)

Query: 113  NMQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSA 170
             + +  G  H L +SN   V+S G  + G LGHG  ++  +   R I       +V+V+ 
Sbjct: 1496 QVSVNAGGKHILALSNEGEVYSWGEGVDGKLGHGNRSS--LDHPRIIESLRGDLIVKVAT 1553

Query: 171  SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
              +H+A +  +G ++T G       GH D+   + +P+LV ALK      V  G      
Sbjct: 1554 GGSHSAAINATGGLYTWGKGRYGRLGHEDSEDQL-KPKLVNALKDNLVVDVACGNGDAQT 1612

Query: 231  LTI------RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS-VVQIAAGPSYMLA 283
            L I         V + G   +G+LG G +     P  I  L  +G  +  +A G  + LA
Sbjct: 1613 LCITEGTGGSSVVWSWGDGDYGKLGRGGSDGCKVPAIIDTL--MGKHITHVACGSQFSLA 1670

Query: 284  VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 343
            ++  G VY++G G  + LGHG      +P+ I++ R  G+ VV VS G  H +A   +G 
Sbjct: 1671 LSKAGGVYTWGKGDYYRLGHGSDEHVRRPKLIESLR--GMKVVEVSVGSLHCIAAVDNGD 1728

Query: 344  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSH 375
            VYTWG    G +G G      +P  +++L+ H
Sbjct: 1729 VYTWGDNDEGQIGDGTTQATQIPRLVAALQGH 1760



 Score = 93.2 bits (230), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 75/244 (30%), Positives = 113/244 (46%), Gaps = 11/244 (4%)

Query: 119 GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
           GR+   L  +  V+S G    G LGHG             FP    +  +S   +H+A +
Sbjct: 525 GRHAMALTYDGHVYSWGDGEEGKLGHGSRADALTPRKIETFPEKC-IRDISCGSSHSAAI 583

Query: 179 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF--TGFLTIRGH 236
             SG ++T G       GH + N  + +P+ V+AL G    QV  G     T  LT  G 
Sbjct: 584 GSSGTLYTWGHGMYGRLGHGN-NHTLLKPKPVQALSGQQVVQVACGSRDAQTLCLTQDGL 642

Query: 237 VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG--SVVQIAAGPSYMLAVTGNGVVYSFG 294
           V++ G    G+LG G +     PK   P+E +    VV+I  G  + LA++  G+V+++G
Sbjct: 643 VYSWGDGDFGKLGRGGSDGCCVPK---PVERLSGQDVVKIECGAQFSLALSRCGLVWTWG 699

Query: 295 SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGA 354
            G  F LGHG      +P+ ++  R     VV V+ G  H +A+   G V+ WG    G 
Sbjct: 700 KGDYFRLGHGSDQHVRRPQVVEGLREH--KVVDVAVGALHCLAVTEGGQVFAWGDNDHGQ 757

Query: 355 LGHG 358
            G+G
Sbjct: 758 QGNG 761



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 66/242 (27%), Positives = 107/242 (44%), Gaps = 7/242 (2%)

Query: 237 VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 296
           V   G N   QLG        TP +   L+ +  V Q+  G   + AVT  G VY+ G  
Sbjct: 432 VFVWGLNDKDQLGGLKGSKHKTPVASKDLQRL-KVTQVIGGSKSLFAVTMGGKVYACGES 490

Query: 297 SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 356
           ++  LG G     +  R  Q    + I  + V +G  H +AL   G+VY+WG G  G LG
Sbjct: 491 TSGRLGLGPVTGSVS-RLTQVLFPQPIKKLAVHSGGRHAMALTYDGHVYSWGDGEEGKLG 549

Query: 357 HGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSD 416
           HG   D   P  + +        +      +  +  +G++Y +G   +G LG    G + 
Sbjct: 550 HGSRADALTPRKIETFPEKCIRDISCGSSHSAAIGSSGTLYTWGHGMYGRLG---HGNNH 606

Query: 417 KVLRPRILDSLRAHHVSQISTGLY--HTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPT 474
            +L+P+ + +L    V Q++ G     T+ +T  G ++ +GD +  +LG     GC  P 
Sbjct: 607 TLLKPKPVQALSGQQVVQVACGSRDAQTLCLTQDGLVYSWGDGDFGKLGRGGSDGCCVPK 666

Query: 475 EI 476
            +
Sbjct: 667 PV 668



 Score = 58.9 bits (141), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 34/135 (25%), Positives = 69/135 (51%), Gaps = 5/135 (3%)

Query: 332  DEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 391
            D+  ++   SG ++ WG  + G LG  +     +P P  SL +   +Q+   ++  F + 
Sbjct: 1397 DDWTLSWVGSGSIFGWGHNHRGQLGGPEGAKVKIPIPCPSLAALKPIQLVGGEQTLFTVT 1456

Query: 392  DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRG 449
              G V+  G+   G LG    G ++ V  P +++S++  H++Q+S   G  H + +++ G
Sbjct: 1457 GEGKVFATGYGAGGRLGI---GSNESVAIPTLIESIQHVHITQVSVNAGGKHILALSNEG 1513

Query: 450  RLFGFGDNERAQLGH 464
             ++ +G+    +LGH
Sbjct: 1514 EVYSWGEGVDGKLGH 1528



 Score = 58.5 bits (140), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 64/241 (26%), Positives = 103/241 (42%), Gaps = 14/241 (5%)

Query: 106  IVETSAGNM--QITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSA 162
            I+E+  G++  ++ TG  H+  I+ +  +++ G    G LGH     Q +    +N    
Sbjct: 1539 IIESLRGDLIVKVATGGSHSAAINATGGLYTWGKGRYGRLGHEDSEDQ-LKPKLVNALKD 1597

Query: 163  AHVVQVSASENHAAFVL------QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGV 216
              VV V+     A  +        S  V++ GD      G R  +     P +++ L G 
Sbjct: 1598 NLVVDVACGNGDAQTLCITEGTGGSSVVWSWGDGDYGKLG-RGGSDGCKVPAIIDTLMGK 1656

Query: 217  PCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA 276
                V  G  F+  L+  G V+T G   + +LGHG       PK I  L  +  VV+++ 
Sbjct: 1657 HITHVACGSQFSLALSKAGGVYTWGKGDYYRLGHGSDEHVRRPKLIESLRGM-KVVEVSV 1715

Query: 277  GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVV 336
            G  + +A   NG VY++G      +G G       PR +     +G H+  VS G  H V
Sbjct: 1716 GSLHCIAAVDNGDVYTWGDNDEGQIGDGTTQATQIPRLVAAL--QGHHISHVSCGSAHTV 1773

Query: 337  A 337
            A
Sbjct: 1774 A 1774


>gi|298714154|emb|CBJ33856.1| conserved unknown protein [Ectocarpus siliculosus]
          Length = 669

 Score =  135 bits (340), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 110/345 (31%), Positives = 158/345 (45%), Gaps = 25/345 (7%)

Query: 142 LGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTN 201
           +G G E    VS   +       V QV     HAA +   G++FT G       GH +  
Sbjct: 250 VGEGGEGWSDVSPVVVQGLLGLSVQQVCCGGQHAAVLTDCGEIFTWGRGGFGRLGHGN-R 308

Query: 202 RPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKS 261
             +  PR +EAL+G+PC QV  G  +T  +T  G ++T G+  +G+LG GD  DR TP  
Sbjct: 309 EGLESPRRIEALEGIPCVQVACGFAYTAAVTASGELYTWGAGENGRLGLGDVADRHTPSR 368

Query: 262 IAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRK 321
           +  L     V ++ AG  +   +T  G VY+F  G +   GHG+  D L PR I TF   
Sbjct: 369 VEGLHS--KVKEVYAGSVHSCVLTREGTVYAF--GKHEYTGHGDHEDVLDPRLIPTFSGG 424

Query: 322 GIHVVR---VSAGDEHVVALDSSGYVYTWGKGYCGALGHGD--------EIDKTLPEP-- 368
              +VR   V  G  H +AL   G VY WG      LG G+        E    LP P  
Sbjct: 425 SGALVRQISVGPGGYHTMALTCQGQVYAWGHNRVAQLGIGNSFTVPRNMEGAYFLPSPQL 484

Query: 369 LSSLKSHLAVQVCARKRKTFVLVDTGSVY--GFGWMGFGSLGFPDRGVSDKVLRPR---- 422
           + SL     V+V A    +  L   G +Y  G  + G   LG P     ++   P     
Sbjct: 485 VESLVGMNIVKVVAGWGHSAALTVDGQLYVCGRNYQGQLGLGSPQGFPQNERGHPFQADF 544

Query: 423 -ILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDT 466
            ++D L+   + QI+ G  H+V V + G ++ FG  ++ QLGH++
Sbjct: 545 CLIDRLQHLKIKQIACGGEHSVAVAENGEVWSFGAGQKGQLGHES 589



 Score = 70.1 bits (170), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 60/199 (30%), Positives = 88/199 (44%), Gaps = 22/199 (11%)

Query: 161 SAAHVVQVSASEN--HAAFVLQSGQVFTCGDN--------SSFCCGHRDTNRPIF--RPR 208
           S A V Q+S      H   +   GQV+  G N        +SF    R+     F   P+
Sbjct: 425 SGALVRQISVGPGGYHTMALTCQGQVYAWGHNRVAQLGIGNSFTV-PRNMEGAYFLPSPQ 483

Query: 209 LVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE-- 266
           LVE+L G+   +V AG   +  LT+ G ++ CG N  GQLG G     P  +   P +  
Sbjct: 484 LVESLVGMNIVKVVAGWGHSAALTVDGQLYVCGRNYQGQLGLGSPQGFPQNERGHPFQAD 543

Query: 267 -------EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFR 319
                  +   + QIA G  + +AV  NG V+SFG+G    LGH     E  PR +Q  +
Sbjct: 544 FCLIDRLQHLKIKQIACGGEHSVAVAENGEVWSFGAGQKGQLGHESTTREDFPRLVQALK 603

Query: 320 RKGIHVVRVSAGDEHVVAL 338
                ++ V+ G+   + L
Sbjct: 604 STRREIMHVACGNNCTLVL 622



 Score = 62.0 bits (149), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 65/236 (27%), Positives = 107/236 (45%), Gaps = 29/236 (12%)

Query: 163 AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG---VPCK 219
           + V +V A   H+  + + G V+  G +     GH D +  +  PRL+    G      +
Sbjct: 374 SKVKEVYAGSVHSCVLTREGTVYAFGKHEY--TGHGD-HEDVLDPRLIPTFSGGSGALVR 430

Query: 220 QVTAGLN--FTGFLTIRGHVHTCGSNTHGQLGHGD--TLDR--------PTPKSIAPLEE 267
           Q++ G     T  LT +G V+  G N   QLG G+  T+ R        P+P+ +  L  
Sbjct: 431 QISVGPGGYHTMALTCQGQVYAWGHNRVAQLGIGNSFTVPRNMEGAYFLPSPQLVESL-- 488

Query: 268 VG-SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTF-------- 318
           VG ++V++ AG  +  A+T +G +Y  G      LG G      Q      F        
Sbjct: 489 VGMNIVKVVAGWGHSAALTVDGQLYVCGRNYQGQLGLGSPQGFPQNERGHPFQADFCLID 548

Query: 319 RRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKS 374
           R + + + +++ G EH VA+  +G V+++G G  G LGH     +  P  + +LKS
Sbjct: 549 RLQHLKIKQIACGGEHSVAVAENGEVWSFGAGQKGQLGHESTTREDFPRLVQALKS 604



 Score = 43.1 bits (100), Expect = 0.36,   Method: Compositional matrix adjust.
 Identities = 49/202 (24%), Positives = 82/202 (40%), Gaps = 27/202 (13%)

Query: 113 NMQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINF-PS--------A 162
            + +  G YHT+ L     V++ G +    LG G   T   +     F PS         
Sbjct: 431 QISVGPGGYHTMALTCQGQVYAWGHNRVAQLGIGNSFTVPRNMEGAYFLPSPQLVESLVG 490

Query: 163 AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPR------------LV 210
            ++V+V A   H+A +   GQ++ CG N     G      P   P+            L+
Sbjct: 491 MNIVKVVAGWGHSAALTVDGQLYVCGRNYQ---GQLGLGSPQGFPQNERGHPFQADFCLI 547

Query: 211 EALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEV-G 269
           + L+ +  KQ+  G   +  +   G V + G+   GQLGH  T     P+ +  L+    
Sbjct: 548 DRLQHLKIKQIACGGEHSVAVAENGEVWSFGAGQKGQLGHESTTREDFPRLVQALKSTRR 607

Query: 270 SVVQIAAGPSYMLAVTGNGVVY 291
            ++ +A G +  L + G GV +
Sbjct: 608 EIMHVACGNNCTLVLAG-GVAF 628


>gi|93003290|tpd|FAA00228.1| TPA: zinc finger protein [Ciona intestinalis]
          Length = 2334

 Score =  135 bits (340), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 95/304 (31%), Positives = 146/304 (48%), Gaps = 12/304 (3%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQ--VT 222
           V QV         V   G+V+ CG+++S   G       +   RL + L   P K+  V 
Sbjct: 464 VTQVIGGSKSLFAVTMGGKVYACGESTSGRLGLGPVTGSV--SRLTQVLFPQPIKKLAVH 521

Query: 223 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 282
           +G      LT  GHV++ G    G+LGHG   D  TP+ I    E   +  I+ G S+  
Sbjct: 522 SGGRHAMALTYDGHVYSWGDGEEGKLGHGSRADALTPRKIETFPE-KCIRDISCGSSHSA 580

Query: 283 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEHVVALDS 340
           A+  +G +Y++G G    LGHG  H  L+P+ +Q     G  VV+V+ G  D   + L  
Sbjct: 581 AIGSSGTLYTWGHGMYGRLGHGNNHTLLKPKPVQAL--SGQQVVQVACGSRDAQTLCLTQ 638

Query: 341 SGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 400
            G VY+WG G  G LG G      +P+P+  L     V++    + +  L   G V+ +G
Sbjct: 639 DGLVYSWGDGDFGKLGRGGSDGCCVPKPVERLSGQDVVKIECGAQFSLALSRCGLVWTWG 698

Query: 401 WMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERA 460
              +  LG    G    V RP++++ LR H V  ++ G  H + VT+ G++F +GDN+  
Sbjct: 699 KGDYFRLG---HGSDQHVRRPQVVEGLREHKVVDVAVGALHCLAVTEGGQVFAWGDNDHG 755

Query: 461 QLGH 464
           Q G+
Sbjct: 756 QQGN 759



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 100/321 (31%), Positives = 154/321 (47%), Gaps = 16/321 (4%)

Query: 131  VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS--ASENHAAFVLQSGQVFTCG 188
            VF+ G    G LG G   +  +  T I      H+ QVS  A   H   +   G+V++ G
Sbjct: 1460 VFATGYGAGGRLGIGSNESVAIP-TLIESIQHVHITQVSVNAGGKHILALSNEGEVYSWG 1518

Query: 189  DNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQL 248
            +      GH + +  +  PR++E+L+G    +V  G + +  +   G ++T G   +G+L
Sbjct: 1519 EGVDGKLGHGNRSS-LDHPRIIESLRGDLIVKVATGGSHSAAINATGGLYTWGKGRYGRL 1577

Query: 249  GHGDTLDRPTPKSIAPLEEVGSVVQIAAG--PSYMLAVT----GNGVVYSFGSGSNFCLG 302
            GH D+ D+  PK +  L++   VV +A G   +  L +T    G+ VV+S+G G    LG
Sbjct: 1578 GHEDSEDQLKPKLVNALKD-NLVVDVACGNGDAQTLCITEGTGGSSVVWSWGDGDYGKLG 1636

Query: 303  HGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEID 362
             G       P  I T    G H+  V+ G +  +AL  +G VYTWGKG    LGHG +  
Sbjct: 1637 RGGSDGCKVPAIIDTLM--GKHITHVACGSQFSLALSKAGGVYTWGKGDYYRLGHGSDEH 1694

Query: 363  KTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPR 422
               P+ + SL+    V+V          VD G VY +G    G +G    G +     PR
Sbjct: 1695 VRRPKLIESLRGMKVVEVSVGSLHCIAAVDNGDVYTWGDNDEGQIG---DGTTQATQIPR 1751

Query: 423  ILDSLRAHHVSQISTGLYHTV 443
            ++ +L+ HH+S +S G  HTV
Sbjct: 1752 LVAALQGHHISHVSCGSAHTV 1772



 Score =  122 bits (307), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 99/361 (27%), Positives = 163/361 (45%), Gaps = 26/361 (7%)

Query: 126  ISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFP----SAAHVVQVSASENHAAFVLQS 181
            + + S+F  G +  G LG GPE  +     +I  P    +A   +Q+   E     V   
Sbjct: 1403 VGSGSIFGWGHNHRGQLG-GPEGAK----VKIPIPCPSLAALKPIQLVGGEQTLFTVTGE 1457

Query: 182  GQVFTCGDNSSFCCGHR---DTNRPIFRPRLVEALKGVPCKQVT--AGLNFTGFLTIRGH 236
            G+VF  G    +  G R    +N  +  P L+E+++ V   QV+  AG      L+  G 
Sbjct: 1458 GKVFATG----YGAGGRLGIGSNESVAIPTLIESIQHVHITQVSVNAGGKHILALSNEGE 1513

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 296
            V++ G    G+LGHG+      P+ I  L     +V++A G S+  A+   G +Y++G G
Sbjct: 1514 VYSWGEGVDGKLGHGNRSSLDHPRIIESLRG-DLIVKVATGGSHSAAINATGGLYTWGKG 1572

Query: 297  SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS----SGYVYTWGKGYC 352
                LGH +  D+L+P+ +   +   +  V    GD   + +      S  V++WG G  
Sbjct: 1573 RYGRLGHEDSEDQLKPKLVNALKDNLVVDVACGNGDAQTLCITEGTGGSSVVWSWGDGDY 1632

Query: 353  GALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDR 412
            G LG G      +P  + +L       V    + +  L   G VY +G   +  LG    
Sbjct: 1633 GKLGRGGSDGCKVPAIIDTLMGKHITHVACGSQFSLALSKAGGVYTWGKGDYYRLG---H 1689

Query: 413  GVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLE 472
            G  + V RP++++SLR   V ++S G  H +   D G ++ +GDN+  Q+G  T +    
Sbjct: 1690 GSDEHVRRPKLIESLRGMKVVEVSVGSLHCIAAVDNGDVYTWGDNDEGQIGDGTTQATQI 1749

Query: 473  P 473
            P
Sbjct: 1750 P 1750



 Score =  119 bits (297), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 88/319 (27%), Positives = 147/319 (46%), Gaps = 9/319 (2%)

Query: 131 VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDN 190
           V++CG S  G LG GP T      T++ FP     + V +   HA  +   G V++ GD 
Sbjct: 483 VYACGESTSGRLGLGPVTGSVSRLTQVLFPQPIKKLAVHSGGRHAMALTYDGHVYSWGDG 542

Query: 191 SSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGH 250
                GH  +      PR +E       + ++ G + +  +   G ++T G   +G+LGH
Sbjct: 543 EEGKLGH-GSRADALTPRKIETFPEKCIRDISCGSSHSAAIGSSGTLYTWGHGMYGRLGH 601

Query: 251 GDTLDRPTPKSIAPLEEVGSVVQIAAGP--SYMLAVTGNGVVYSFGSGSNFCLGHGEQHD 308
           G+      PK +  L     VVQ+A G   +  L +T +G+VYS+G G    LG G    
Sbjct: 602 GNNHTLLKPKPVQALSG-QQVVQVACGSRDAQTLCLTQDGLVYSWGDGDFGKLGRGGSDG 660

Query: 309 ELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEP 368
              P+ ++  R  G  VV++  G +  +AL   G V+TWGKG    LGHG +     P+ 
Sbjct: 661 CCVPKPVE--RLSGQDVVKIECGAQFSLALSRCGLVWTWGKGDYFRLGHGSDQHVRRPQV 718

Query: 369 LSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLR 428
           +  L+ H  V V         + + G V+ +G    G  G     V+ K ++ + L+ ++
Sbjct: 719 VEGLREHKVVDVAVGALHCLAVTEGGQVFAWGDNDHGQQGNGGTTVNRKPMKVQGLEGVK 778

Query: 429 AHHVSQISTGLYHTVVVTD 447
              +++++ G  H++   D
Sbjct: 779 ---ITKLACGSSHSIAFAD 794



 Score =  101 bits (252), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 76/251 (30%), Positives = 124/251 (49%), Gaps = 16/251 (6%)

Query: 235  GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
            G +   G N  GQLG   G  +  P P  S+A L+ +    Q+  G   +  VTG G V+
Sbjct: 1406 GSIFGWGHNHRGQLGGPEGAKVKIPIPCPSLAALKPI----QLVGGEQTLFTVTGEGKVF 1461

Query: 292  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 351
            + G G+   LG G       P  I++ +   I  V V+AG +H++AL + G VY+WG+G 
Sbjct: 1462 ATGYGAGGRLGIGSNESVAIPTLIESIQHVHITQVSVNAGGKHILALSNEGEVYSWGEGV 1521

Query: 352  CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 411
             G LGHG+      P  + SL+  L V+V      +  +  TG +Y +G   +G LG  D
Sbjct: 1522 DGKLGHGNRSSLDHPRIIESLRGDLIVKVATGGSHSAAINATGGLYTWGKGRYGRLGHED 1581

Query: 412  RGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTD----RGRLFGFGDNERAQLGHD 465
               S+  L+P+++++L+ + V  ++   G   T+ +T+       ++ +GD +  +LG  
Sbjct: 1582 ---SEDQLKPKLVNALKDNLVVDVACGNGDAQTLCITEGTGGSSVVWSWGDGDYGKLGRG 1638

Query: 466  TLRGCLEPTEI 476
               GC  P  I
Sbjct: 1639 GSDGCKVPAII 1649



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 81/272 (29%), Positives = 128/272 (47%), Gaps = 16/272 (5%)

Query: 113  NMQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSA 170
             + +  G  H L +SN   V+S G  + G LGHG  ++  +   R I       +V+V+ 
Sbjct: 1495 QVSVNAGGKHILALSNEGEVYSWGEGVDGKLGHGNRSS--LDHPRIIESLRGDLIVKVAT 1552

Query: 171  SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
              +H+A +  +G ++T G       GH D+   + +P+LV ALK      V  G      
Sbjct: 1553 GGSHSAAINATGGLYTWGKGRYGRLGHEDSEDQL-KPKLVNALKDNLVVDVACGNGDAQT 1611

Query: 231  LTI------RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS-VVQIAAGPSYMLA 283
            L I         V + G   +G+LG G +     P  I  L  +G  +  +A G  + LA
Sbjct: 1612 LCITEGTGGSSVVWSWGDGDYGKLGRGGSDGCKVPAIIDTL--MGKHITHVACGSQFSLA 1669

Query: 284  VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 343
            ++  G VY++G G  + LGHG      +P+ I++ R  G+ VV VS G  H +A   +G 
Sbjct: 1670 LSKAGGVYTWGKGDYYRLGHGSDEHVRRPKLIESLR--GMKVVEVSVGSLHCIAAVDNGD 1727

Query: 344  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSH 375
            VYTWG    G +G G      +P  +++L+ H
Sbjct: 1728 VYTWGDNDEGQIGDGTTQATQIPRLVAALQGH 1759



 Score = 93.2 bits (230), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 75/244 (30%), Positives = 113/244 (46%), Gaps = 11/244 (4%)

Query: 119 GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
           GR+   L  +  V+S G    G LGHG             FP    +  +S   +H+A +
Sbjct: 524 GRHAMALTYDGHVYSWGDGEEGKLGHGSRADALTPRKIETFPEKC-IRDISCGSSHSAAI 582

Query: 179 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF--TGFLTIRGH 236
             SG ++T G       GH + N  + +P+ V+AL G    QV  G     T  LT  G 
Sbjct: 583 GSSGTLYTWGHGMYGRLGHGN-NHTLLKPKPVQALSGQQVVQVACGSRDAQTLCLTQDGL 641

Query: 237 VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG--SVVQIAAGPSYMLAVTGNGVVYSFG 294
           V++ G    G+LG G +     PK   P+E +    VV+I  G  + LA++  G+V+++G
Sbjct: 642 VYSWGDGDFGKLGRGGSDGCCVPK---PVERLSGQDVVKIECGAQFSLALSRCGLVWTWG 698

Query: 295 SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGA 354
            G  F LGHG      +P+ ++  R     VV V+ G  H +A+   G V+ WG    G 
Sbjct: 699 KGDYFRLGHGSDQHVRRPQVVEGLREH--KVVDVAVGALHCLAVTEGGQVFAWGDNDHGQ 756

Query: 355 LGHG 358
            G+G
Sbjct: 757 QGNG 760



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 66/242 (27%), Positives = 107/242 (44%), Gaps = 7/242 (2%)

Query: 237 VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 296
           V   G N   QLG        TP +   L+ +  V Q+  G   + AVT  G VY+ G  
Sbjct: 431 VFVWGLNDKDQLGGLKGSKHKTPVASKDLQRL-KVTQVIGGSKSLFAVTMGGKVYACGES 489

Query: 297 SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 356
           ++  LG G     +  R  Q    + I  + V +G  H +AL   G+VY+WG G  G LG
Sbjct: 490 TSGRLGLGPVTGSVS-RLTQVLFPQPIKKLAVHSGGRHAMALTYDGHVYSWGDGEEGKLG 548

Query: 357 HGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSD 416
           HG   D   P  + +        +      +  +  +G++Y +G   +G LG    G + 
Sbjct: 549 HGSRADALTPRKIETFPEKCIRDISCGSSHSAAIGSSGTLYTWGHGMYGRLG---HGNNH 605

Query: 417 KVLRPRILDSLRAHHVSQISTGLY--HTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPT 474
            +L+P+ + +L    V Q++ G     T+ +T  G ++ +GD +  +LG     GC  P 
Sbjct: 606 TLLKPKPVQALSGQQVVQVACGSRDAQTLCLTQDGLVYSWGDGDFGKLGRGGSDGCCVPK 665

Query: 475 EI 476
            +
Sbjct: 666 PV 667



 Score = 58.9 bits (141), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 34/135 (25%), Positives = 69/135 (51%), Gaps = 5/135 (3%)

Query: 332  DEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 391
            D+  ++   SG ++ WG  + G LG  +     +P P  SL +   +Q+   ++  F + 
Sbjct: 1396 DDWTLSWVGSGSIFGWGHNHRGQLGGPEGAKVKIPIPCPSLAALKPIQLVGGEQTLFTVT 1455

Query: 392  DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRG 449
              G V+  G+   G LG    G ++ V  P +++S++  H++Q+S   G  H + +++ G
Sbjct: 1456 GEGKVFATGYGAGGRLGI---GSNESVAIPTLIESIQHVHITQVSVNAGGKHILALSNEG 1512

Query: 450  RLFGFGDNERAQLGH 464
             ++ +G+    +LGH
Sbjct: 1513 EVYSWGEGVDGKLGH 1527



 Score = 58.5 bits (140), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 64/241 (26%), Positives = 103/241 (42%), Gaps = 14/241 (5%)

Query: 106  IVETSAGNM--QITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSA 162
            I+E+  G++  ++ TG  H+  I+ +  +++ G    G LGH     Q +    +N    
Sbjct: 1538 IIESLRGDLIVKVATGGSHSAAINATGGLYTWGKGRYGRLGHEDSEDQ-LKPKLVNALKD 1596

Query: 163  AHVVQVSASENHAAFVL------QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGV 216
              VV V+     A  +        S  V++ GD      G R  +     P +++ L G 
Sbjct: 1597 NLVVDVACGNGDAQTLCITEGTGGSSVVWSWGDGDYGKLG-RGGSDGCKVPAIIDTLMGK 1655

Query: 217  PCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA 276
                V  G  F+  L+  G V+T G   + +LGHG       PK I  L  +  VV+++ 
Sbjct: 1656 HITHVACGSQFSLALSKAGGVYTWGKGDYYRLGHGSDEHVRRPKLIESLRGM-KVVEVSV 1714

Query: 277  GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVV 336
            G  + +A   NG VY++G      +G G       PR +     +G H+  VS G  H V
Sbjct: 1715 GSLHCIAAVDNGDVYTWGDNDEGQIGDGTTQATQIPRLVAAL--QGHHISHVSCGSAHTV 1772

Query: 337  A 337
            A
Sbjct: 1773 A 1773


>gi|24655113|ref|NP_728591.1| CG9153, isoform A [Drosophila melanogaster]
 gi|24655115|ref|NP_612098.2| CG9153, isoform B [Drosophila melanogaster]
 gi|23092754|gb|AAF47474.2| CG9153, isoform A [Drosophila melanogaster]
 gi|23092755|gb|AAF47475.2| CG9153, isoform B [Drosophila melanogaster]
          Length = 1058

 Score =  135 bits (340), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 108/360 (30%), Positives = 168/360 (46%), Gaps = 25/360 (6%)

Query: 125 LISNSSVFSCGSSLCGVLGHG-PETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQ 183
           + S   ++  GS+  G LG G  E  Q ++ ++I +     V QV+    H  F+  +G+
Sbjct: 1   MASGKELYCWGSTSHGQLGLGGIEDEQILTPSQIPWTPDTAVQQVACGHRHTLFLTATGK 60

Query: 184 VFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 243
           V+ CG N     GH   + P  RP L+  L+     Q+  G   +  L+  G V + G N
Sbjct: 61  VYACGSNDYSQLGH---DLPTKRPLLIPELQDYVIIQICCGSRHSLALSDWGQVLSWGDN 117

Query: 244 THGQLGHGDTLDRPTPKSIAPLEEV------GSVVQIAAGPSYMLAVTGNGVVYSFGSGS 297
             GQLGH       T K I  L +V       +VVQIA G ++ LA+T  G +YS+GS  
Sbjct: 118 DCGQLGHA------TDKEIVQLPKVVRQLVTKTVVQIACGNNHSLALTSCGELYSWGSNI 171

Query: 298 NFCLGHGEQHDELQ---PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGA 354
              LG    +D      P  + T    GI +  ++ G  H   +  SG V+ WG+  CG 
Sbjct: 172 YGQLGVNSPNDLTHCNYPLRLTTLL--GIPLAAIACGGNHSFLISKSGAVFGWGRNNCGQ 229

Query: 355 LGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGV 414
           LG  DE +++ P  L +L++     V      +  L + G V+  G   +G LG    G 
Sbjct: 230 LGLNDETNRSYPTQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGAYGQLG---HGF 286

Query: 415 SDKVLRPRILDSLRAHHVSQISTGLYHTV-VVTDRGRLFGFGDNERAQLGHDTLRGCLEP 473
           S   + PR++  L    ++Q++ G  HT+ +V  RGR++ FG     QLG  + +  + P
Sbjct: 287 SSNEMLPRMVMELMGSTITQVACGNRHTLALVPSRGRVYAFGLGSSGQLGTRSTKSLMLP 346



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 91/301 (30%), Positives = 137/301 (45%), Gaps = 15/301 (4%)

Query: 115 QITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
           Q+  G  HTL ++ +  V++CGS+    LGH   T + +    +       ++Q+     
Sbjct: 44  QVACGHRHTLFLTATGKVYACGSNDYSQLGHDLPTKRPLLIPELQ---DYVIIQICCGSR 100

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
           H+  +   GQV + GDN     GH      +  P++V  L      Q+  G N +  LT 
Sbjct: 101 HSLALSDWGQVLSWGDNDCGQLGHATDKEIVQLPKVVRQLVTKTVVQIACGNNHSLALTS 160

Query: 234 RGHVHTCGSNTHGQLGHGDTLDRP---TPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 290
            G +++ GSN +GQLG     D      P  +  L  +  +  IA G ++   ++ +G V
Sbjct: 161 CGELYSWGSNIYGQLGVNSPNDLTHCNYPLRLTTLLGI-PLAAIACGGNHSFLISKSGAV 219

Query: 291 YSFGSGSNFC--LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 348
             FG G N C  LG  ++ +   P  ++T R  G+    V+ GDE  V L + G V+T G
Sbjct: 220 --FGWGRNNCGQLGLNDETNRSYPTQLKTLRTLGVRF--VACGDEFSVFLTNEGGVFTCG 275

Query: 349 KGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDT-GSVYGFGWMGFGSL 407
            G  G LGHG   ++ LP  +  L      QV    R T  LV + G VY FG    G L
Sbjct: 276 AGAYGQLGHGFSSNEMLPRMVMELMGSTITQVACGNRHTLALVPSRGRVYAFGLGSSGQL 335

Query: 408 G 408
           G
Sbjct: 336 G 336



 Score = 94.7 bits (234), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 79/263 (30%), Positives = 119/263 (45%), Gaps = 17/263 (6%)

Query: 114 MQITTGRYHTLLISN-SSVFSCGSSLCGVLGHG--PETTQCVSFTRINFPSAAHVVQVSA 170
           +QI  G  H+L +S+   V S G + CG LGH    E  Q     R        VVQ++ 
Sbjct: 93  IQICCGSRHSLALSDWGQVLSWGDNDCGQLGHATDKEIVQLPKVVRQLVTKT--VVQIAC 150

Query: 171 SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRP-----IFRPRLVEALKGVPCKQVTAGL 225
             NH+  +   G++++ G N     G    N P        P  +  L G+P   +  G 
Sbjct: 151 GNNHSLALTSCGELYSWGSN---IYGQLGVNSPNDLTHCNYPLRLTTLLGIPLAAIACGG 207

Query: 226 NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 285
           N +  ++  G V   G N  GQLG  D  +R  P  +  L  +G V  +A G  + + +T
Sbjct: 208 NHSFLISKSGAVFGWGRNNCGQLGLNDETNRSYPTQLKTLRTLG-VRFVACGDEFSVFLT 266

Query: 286 GNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL-DSSGYV 344
             G V++ G+G+   LGHG   +E+ PR +      G  + +V+ G+ H +AL  S G V
Sbjct: 267 NEGGVFTCGAGAYGQLGHGFSSNEMLPRMVMELM--GSTITQVACGNRHTLALVPSRGRV 324

Query: 345 YTWGKGYCGALGHGDEIDKTLPE 367
           Y +G G  G LG        LP+
Sbjct: 325 YAFGLGSSGQLGTRSTKSLMLPQ 347



 Score = 92.8 bits (229), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 71/244 (29%), Positives = 109/244 (44%), Gaps = 8/244 (3%)

Query: 236 HVHTCGSNTHGQLGHGDTLDRP--TPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
            ++  GS +HGQLG G   D    TP  I P     +V Q+A G  + L +T  G VY+ 
Sbjct: 6   ELYCWGSTSHGQLGLGGIEDEQILTPSQI-PWTPDTAVQQVACGHRHTLFLTATGKVYAC 64

Query: 294 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 353
           GS     LGH    D    R +     +   ++++  G  H +AL   G V +WG   CG
Sbjct: 65  GSNDYSQLGH----DLPTKRPLLIPELQDYVIIQICCGSRHSLALSDWGQVLSWGDNDCG 120

Query: 354 ALGHG-DEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDR 412
            LGH  D+    LP+ +  L +   VQ+      +  L   G +Y +G   +G LG    
Sbjct: 121 QLGHATDKEIVQLPKVVRQLVTKTVVQIACGNNHSLALTSCGELYSWGSNIYGQLGVNSP 180

Query: 413 GVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLE 472
                   P  L +L    ++ I+ G  H+ +++  G +FG+G N   QLG +       
Sbjct: 181 NDLTHCNYPLRLTTLLGIPLAAIACGGNHSFLISKSGAVFGWGRNNCGQLGLNDETNRSY 240

Query: 473 PTEI 476
           PT++
Sbjct: 241 PTQL 244



 Score = 81.6 bits (200), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 69/208 (33%), Positives = 107/208 (51%), Gaps = 10/208 (4%)

Query: 114 MQITTGRYHTL-LISNSSVFSCGSSLCGVLG-HGP-ETTQCVSFTRINFPSAAHVVQVSA 170
           +QI  G  H+L L S   ++S GS++ G LG + P + T C    R+       +  ++ 
Sbjct: 146 VQIACGNNHSLALTSCGELYSWGSNIYGQLGVNSPNDLTHCNYPLRLTTLLGIPLAAIAC 205

Query: 171 SENHAAFVLQSGQVFTCGDNSSFCCGHRD-TNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
             NH+  + +SG VF  G N+    G  D TNR    P  ++ L+ +  + V  G  F+ 
Sbjct: 206 GGNHSFLISKSGAVFGWGRNNCGQLGLNDETNRSY--PTQLKTLRTLGVRFVACGDEFSV 263

Query: 230 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGN 287
           FLT  G V TCG+  +GQLGHG + +   P+ +  +E +GS + Q+A G  + LA V   
Sbjct: 264 FLTNEGGVFTCGAGAYGQLGHGFSSNEMLPRMV--MELMGSTITQVACGNRHTLALVPSR 321

Query: 288 GVVYSFGSGSNFCLGHGEQHDELQPRAI 315
           G VY+FG GS+  LG       + P+ +
Sbjct: 322 GRVYAFGLGSSGQLGTRSTKSLMLPQVV 349


>gi|149033226|gb|EDL88027.1| hect domain and RLD 3 (predicted), isoform CRA_b [Rattus
           norvegicus]
          Length = 909

 Score =  135 bits (340), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 97/301 (32%), Positives = 148/301 (49%), Gaps = 29/301 (9%)

Query: 193 FCCGHRDTNRP---------IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 243
            C G+    +P         +  P++   +     K+V  G N + FL   G V+TCG N
Sbjct: 2   LCWGYWSLGQPGISSNLQGIVAEPQVCRFVSDRSIKEVACGGNHSVFLLEDGEVYTCGVN 61

Query: 244 THGQLGHGDTLDRPTPKSIAPLEEVGS-----VVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
           T GQLGH    ++P        E++G+     ++ +A G S+ LA++  G ++S+G+GS+
Sbjct: 62  TKGQLGHEREGNKP--------EQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSD 113

Query: 299 FCLGHGEQHDELQ-PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 357
             LG     D +  PR IQ   ++ I  ++VS G+ H +AL + G  +TWGK   G LG 
Sbjct: 114 GQLGLMTTEDSVAVPRLIQKLNQQTI--LQVSCGNWHCLALAADGQFFTWGKNSHGQLGL 171

Query: 358 GDEI-DKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSD 416
           G E   +T P+ + SL+     QV A    +F L  +G+V+G+G    G LG  D    +
Sbjct: 172 GKEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRE 231

Query: 417 KVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 476
               P  +  LR   V  IS G  HT V+T  G +F FG     QLGHD++   + P  +
Sbjct: 232 S---PCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSVNDEVNPRRV 288

Query: 477 F 477
            
Sbjct: 289 L 289



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 97/309 (31%), Positives = 160/309 (51%), Gaps = 14/309 (4%)

Query: 159 FPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVP 217
           F S   + +V+   NH+ F+L+ G+V+TCG N+    GH R+ N    +P  + AL    
Sbjct: 30  FVSDRSIKEVACGGNHSVFLLEDGEVYTCGVNTKGQLGHEREGN----KPEQIGALADQH 85

Query: 218 CKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDR-PTPKSIAPLEEVGSVVQIAA 276
              V  G + +  L+ RG + + G+ + GQLG   T D    P+ I  L +  +++Q++ 
Sbjct: 86  IIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQ-QTILQVSC 144

Query: 277 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH-DELQPRAIQTFRRKGIHVVRVSAGDEHV 335
           G  + LA+  +G  +++G  S+  LG G++   +  P+ +++   +GI + +V+AG  H 
Sbjct: 145 GNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQTSPQRVRSL--EGIPLAQVAAGGAHS 202

Query: 336 VALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGS 395
            AL  SG V+ WG    G LG  DE D+  P  +  L++   V +   +  T VL  +G 
Sbjct: 203 FALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGG 262

Query: 396 VYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV-VVTDRGRLFGF 454
           V+ FG    G LG     V+D+V  PR +  L    V+QI+ G  HT+ +V   G ++ F
Sbjct: 263 VFTFGAGSCGQLG--HDSVNDEV-NPRRVLELMGSEVTQIACGRQHTLALVPSSGLIYAF 319

Query: 455 GDNERAQLG 463
           G   + QLG
Sbjct: 320 GCGAKGQLG 328



 Score =  124 bits (312), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 89/292 (30%), Positives = 140/292 (47%), Gaps = 8/292 (2%)

Query: 119 GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
           G +   L+ +  V++CG +  G LGH  E  +     +I   +  H++ V+  E+H+  +
Sbjct: 43  GNHSVFLLEDGEVYTCGVNTKGQLGHEREGNKP---EQIGALADQHIIHVACGESHSLAL 99

Query: 179 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVH 238
              GQ+F+ G  S    G   T   +  PRL++ L      QV+ G      L   G   
Sbjct: 100 SDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFF 159

Query: 239 TCGSNTHGQLGHGDTLDRPT-PKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 297
           T G N+HGQLG G      T P+ +  LE +  + Q+AAG ++  A++ +G V+ +G  +
Sbjct: 160 TWGKNSHGQLGLGKEFPSQTSPQRVRSLEGI-PLAQVAAGGAHSFALSLSGAVFGWGMNN 218

Query: 298 NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 357
              LG  ++ D   P  ++  R +   VV +S G+EH   L  SG V+T+G G CG LGH
Sbjct: 219 AGQLGLSDEKDRESPCHVKLLRTQ--KVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGH 276

Query: 358 GDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV-DTGSVYGFGWMGFGSLG 408
               D+  P  +  L      Q+   ++ T  LV  +G +Y FG    G LG
Sbjct: 277 DSVNDEVNPRRVLELMGSEVTQIACGRQHTLALVPSSGLIYAFGCGAKGQLG 328



 Score =  105 bits (263), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 91/279 (32%), Positives = 133/279 (47%), Gaps = 13/279 (4%)

Query: 114 MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSAS 171
           + +  G  H+L +S+   +FS G+   G LG    T   V+  R I   +   ++QVS  
Sbjct: 87  IHVACGESHSLALSDRGQLFSWGAGSDGQLGLM-TTEDSVAVPRLIQKLNQQTILQVSCG 145

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
             H   +   GQ FT G NS    G          P+ V +L+G+P  QV AG   +  L
Sbjct: 146 NWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFAL 205

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
           ++ G V   G N  GQLG  D  DR +P  +  L     VV I+ G  +   +T +G V+
Sbjct: 206 SLSGAVFGWGMNNAGQLGLSDEKDRESPCHVK-LLRTQKVVYISCGEEHTAVLTKSGGVF 264

Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL-DSSGYVYTWGKG 350
           +FG+GS   LGH   +DE+ PR +      G  V +++ G +H +AL  SSG +Y +G G
Sbjct: 265 TFGAGSCGQLGHDSVNDEVNPRRV--LELMGSEVTQIACGRQHTLALVPSSGLIYAFGCG 322

Query: 351 YCGALGHGDEIDKTLPEPLSSLKSHLAV---QVCARKRK 386
             G LG G   +   P P   +K H A    Q+ AR  +
Sbjct: 323 AKGQLGTGHTCNVKCPSP---VKGHWAAHSGQLSARADR 358


>gi|337751269|ref|YP_004645431.1| hypothetical protein KNP414_07049 [Paenibacillus mucilaginosus
           KNP414]
 gi|336302458|gb|AEI45561.1| hypothetical protein KNP414_07049 [Paenibacillus mucilaginosus
           KNP414]
          Length = 404

 Score =  135 bits (340), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 106/378 (28%), Positives = 173/378 (45%), Gaps = 38/378 (10%)

Query: 102 HSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPS 161
            S+ +V  +AG      G   T+L S+ +V++ G +  G LG+G E      F +++   
Sbjct: 32  ESTSVVSINAG------GYVSTILRSDGTVWTTGRNNVGQLGNGTEKDSSY-FGKVD--E 82

Query: 162 AAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQV 221
              VV + +  +H   + + G V+  G NS       +  + I RP  +  LK +   QV
Sbjct: 83  LYDVVSLDSDMDHTLAITKHGTVWGWGYNSKGEI--TEGGKNIARPVQINGLKDIV--QV 138

Query: 222 TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 281
           + GL  +  L   G V + G N +GQLG+G   D   P  +   E + ++V I AG  + 
Sbjct: 139 STGLVHSLALDQSGAVWSWGENIYGQLGNGTNQDSSIPTKV---EFLSNIVAIEAGAEHS 195

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 341
           LA++ +G V+++G      LG+GE      PR ++       ++  ++ GD H +ALD  
Sbjct: 196 LALSNDGKVWAWGRNEFGQLGNGETEKSNIPRLVKNLE----NIEMIAGGDNHSLALDHD 251

Query: 342 GYVYTWGKGYCGALGHG------------DEIDKTLPEPLSSLKSHLAVQVCARKRKTFV 389
           G ++ WG    G +G G            ++ +KT P  L+ L   +  QV A  + +  
Sbjct: 252 GAIWAWGYNSNGQIGDGSSNVYEKDGQLREKRNKTEPVKLNGLYGKVK-QVSAGIKHSTA 310

Query: 390 LVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRG 449
           L + G VY +GW  +G LG      S   LR  +        +  I TG YH+  V + G
Sbjct: 311 LTENGEVYAWGWNEYGQLGNGSMKDSKVPLRNNV-----GRSIIDIETGSYHSFAVDESG 365

Query: 450 RLFGFGDNERAQLGHDTL 467
            ++ +GD    QLG  T 
Sbjct: 366 VIYAWGDATYGQLGDGTF 383



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 82/328 (25%), Positives = 151/328 (46%), Gaps = 28/328 (8%)

Query: 159 FPSAAH---VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 215
           FP  +    VV ++A    +  +   G V+T G N+    G+       +  ++ E    
Sbjct: 27  FPKNSESTSVVSINAGGYVSTILRSDGTVWTTGRNNVGQLGNGTEKDSSYFGKVDELYDV 86

Query: 216 VPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQI 274
           V    + + ++ T  +T  G V   G N+ G++  G   + RP    I  L+++   VQ+
Sbjct: 87  VS---LDSDMDHTLAITKHGTVWGWGYNSKGEITEGGKNIARPV--QINGLKDI---VQV 138

Query: 275 AAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEH 334
           + G  + LA+  +G V+S+G      LG+G   D   P  ++       ++V + AG EH
Sbjct: 139 STGLVHSLALDQSGAVWSWGENIYGQLGNGTNQDSSIPTKVEFLS----NIVAIEAGAEH 194

Query: 335 VVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 394
            +AL + G V+ WG+   G LG+G+     +P  + +L++     +      +  L   G
Sbjct: 195 SLALSNDGKVWAWGRNEFGQLGNGETEKSNIPRLVKNLEN--IEMIAGGDNHSLALDHDG 252

Query: 395 SVYGFGWMGFGSLGFPDRGVSDK--VLR-------PRILDSLRAHHVSQISTGLYHTVVV 445
           +++ +G+   G +G     V +K   LR       P  L+ L    V Q+S G+ H+  +
Sbjct: 253 AIWAWGYNSNGQIGDGSSNVYEKDGQLREKRNKTEPVKLNGLYGK-VKQVSAGIKHSTAL 311

Query: 446 TDRGRLFGFGDNERAQLGHDTLRGCLEP 473
           T+ G ++ +G NE  QLG+ +++    P
Sbjct: 312 TENGEVYAWGWNEYGQLGNGSMKDSKVP 339



 Score = 61.6 bits (148), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 47/177 (26%), Positives = 85/177 (48%), Gaps = 13/177 (7%)

Query: 300 CLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGD 359
           C     Q D L P+  ++       VV ++AG      L S G V+T G+   G LG+G 
Sbjct: 16  CSQQAVQEDALFPKNSES-----TSVVSINAGGYVSTILRSDGTVWTTGRNNVGQLGNGT 70

Query: 360 EIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVL 419
           E D +    +  L  +  V + +    T  +   G+V+G+G+   G +    + ++    
Sbjct: 71  EKDSSYFGKVDEL--YDVVSLDSDMDHTLAITKHGTVWGWGYNSKGEITEGGKNIA---- 124

Query: 420 RPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 476
           RP  ++ L+   + Q+STGL H++ +   G ++ +G+N   QLG+ T +    PT++
Sbjct: 125 RPVQINGLK--DIVQVSTGLVHSLALDQSGAVWSWGENIYGQLGNGTNQDSSIPTKV 179


>gi|142942429|gb|ABO93003.1| putative regulator of chromosome condensation RCC1 [Solanum
           tuberosum]
          Length = 951

 Score =  135 bits (340), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 98/330 (29%), Positives = 155/330 (46%), Gaps = 23/330 (6%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V  +S    HA  V + G+ F+ G+ +    GH      +  P+L++  KG+  + +  G
Sbjct: 310 VQNISCGNRHAMLVTKQGEAFSWGEEAGGRLGH-GAETDVSHPKLIKNFKGMNVELIACG 368

Query: 225 LNFTGFLTIRGHVHTCG--SNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 282
              +  +T  G ++T G  + + G LGH        PK +  L E   V  ++ GP +  
Sbjct: 369 EYHSCAVTSSGDLYTWGDGAKSSGLLGHRSEASHWIPKKVCGLMEGLRVSHVSCGPWHTA 428

Query: 283 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA----- 337
            +T  G +++FG G+   LGHG++   + PR ++TF   G+  ++V+ G  H  A     
Sbjct: 429 LITSAGRLFTFGDGTFGALGHGDRSGCITPREVETF--NGLKTLKVACGVWHTAAVVELM 486

Query: 338 --LDS------SGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFV 389
             LDS      SG ++TWG G  G LGHGD   +  P+ +++L      +V      T  
Sbjct: 487 SGLDSRPSDAPSGTLFTWGDGDKGKLGHGDNKPRLAPQCITALVDKSFSEVACSYAMTVA 546

Query: 390 LVDTGSVYGFGWMGFGSLGFP-DRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDR 448
           L  TG VY  G   +G LG P   G+S   +   ++DS     V +IS G +H  V+T R
Sbjct: 547 LTTTGRVYTMGSNVYGQLGCPLANGMSPICVEDYLVDST----VEEISCGSHHVAVLTSR 602

Query: 449 GRLFGFGDNERAQLGHDTLRGCLEPTEIFI 478
             ++ +G  E  QLGH        PT + I
Sbjct: 603 TEVYTWGKGENGQLGHGDCENKCTPTLVDI 632



 Score = 95.1 bits (235), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 80/267 (29%), Positives = 116/267 (43%), Gaps = 20/267 (7%)

Query: 116 ITTGRYHTLLISNSS---VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           I  G YH+  +++S     +  G+   G+LGH  E +  +            V  VS   
Sbjct: 365 IACGEYHSCAVTSSGDLYTWGDGAKSSGLLGHRSEASHWIPKKVCGLMEGLRVSHVSCGP 424

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL- 231
            H A +  +G++FT GD +    GH D +  I  PR VE   G+   +V  G+  T  + 
Sbjct: 425 WHTALITSAGRLFTFGDGTFGALGHGDRSGCI-TPREVETFNGLKTLKVACGVWHTAAVV 483

Query: 232 ------------TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPS 279
                          G + T G    G+LGHGD   R  P+ I  L +  S  ++A   +
Sbjct: 484 ELMSGLDSRPSDAPSGTLFTWGDGDKGKLGHGDNKPRLAPQCITALVD-KSFSEVACSYA 542

Query: 280 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 339
             +A+T  G VY+ GS     LG     + + P  ++ +      V  +S G  HV  L 
Sbjct: 543 MTVALTTTGRVYTMGSNVYGQLG-CPLANGMSPICVEDYLVDST-VEEISCGSHHVAVLT 600

Query: 340 SSGYVYTWGKGYCGALGHGDEIDKTLP 366
           S   VYTWGKG  G LGHGD  +K  P
Sbjct: 601 SRTEVYTWGKGENGQLGHGDCENKCTP 627



 Score = 82.8 bits (203), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 70/252 (27%), Positives = 115/252 (45%), Gaps = 33/252 (13%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           ++ G +HT LI+++  +F+ G    G LGHG + + C++   +   +    ++V+    H
Sbjct: 420 VSCGPWHTALITSAGRLFTFGDGTFGALGHG-DRSGCITPREVETFNGLKTLKVACGVWH 478

Query: 175 AAFVLQ-------------SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQV 221
            A V++             SG +FT GD      GH D N+P   P+ + AL      +V
Sbjct: 479 TAAVVELMSGLDSRPSDAPSGTLFTWGDGDKGKLGHGD-NKPRLAPQCITALVDKSFSEV 537

Query: 222 TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEV---GSVVQIAA 276
                 T  LT  G V+T GSN +GQLG       P    ++P+  E+     +V +I+ 
Sbjct: 538 ACSYAMTVALTTTGRVYTMGSNVYGQLGC------PLANGMSPICVEDYLVDSTVEEISC 591

Query: 277 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVV 336
           G  ++  +T    VY++G G N  LGHG+  ++  P  +   R K   V R+  G     
Sbjct: 592 GSHHVAVLTSRTEVYTWGKGENGQLGHGDCENKCTPTLVDILRDK--QVKRIVCGSNFSA 649

Query: 337 ALDSSGYVYTWG 348
           A+     V+ W 
Sbjct: 650 AI----CVHNWA 657


>gi|12856817|dbj|BAB30794.1| unnamed protein product [Mus musculus]
          Length = 913

 Score =  135 bits (340), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 97/301 (32%), Positives = 148/301 (49%), Gaps = 29/301 (9%)

Query: 193 FCCGHRDTNRP---------IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 243
            C G+    +P         +  P++   +     K+V  G N + FL   G V+TCG N
Sbjct: 2   LCWGYWSLGQPGISSNLQGIVAEPQVCRFVSDRSIKEVACGGNHSVFLLEDGEVYTCGVN 61

Query: 244 THGQLGHGDTLDRPTPKSIAPLEEVGS-----VVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
           T GQLGH    ++P        E++G+     ++ +A G S+ LA++  G ++S+G+GS+
Sbjct: 62  TKGQLGHEREGNKP--------EQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSD 113

Query: 299 FCLGHGEQHDELQ-PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 357
             LG     D +  PR IQ   ++ I  ++VS G+ H +AL + G  +TWGK   G LG 
Sbjct: 114 GQLGLMTTEDSVAVPRLIQKLNQQTI--LQVSCGNWHCLALAADGQFFTWGKNSHGQLGL 171

Query: 358 GDEI-DKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSD 416
           G E   +T P+ + SL+     QV A    +F L  +G+V+G+G    G LG  D    +
Sbjct: 172 GKEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRE 231

Query: 417 KVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 476
               P  +  LR   V  IS G  HT V+T  G +F FG     QLGHD++   + P  +
Sbjct: 232 S---PCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSVNDEVNPRRV 288

Query: 477 F 477
            
Sbjct: 289 L 289



 Score =  127 bits (318), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 97/309 (31%), Positives = 160/309 (51%), Gaps = 14/309 (4%)

Query: 159 FPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVP 217
           F S   + +V+   NH+ F+L+ G+V+TCG N+    GH R+ N    +P  + AL    
Sbjct: 30  FVSDRSIKEVACGGNHSVFLLEDGEVYTCGVNTKGQLGHEREGN----KPEQIGALADQH 85

Query: 218 CKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDR-PTPKSIAPLEEVGSVVQIAA 276
              V  G + +  L+ RG + + G+ + GQLG   T D    P+ I  L +  +++Q++ 
Sbjct: 86  IIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQ-QTILQVSC 144

Query: 277 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH-DELQPRAIQTFRRKGIHVVRVSAGDEHV 335
           G  + LA+  +G  +++G  S+  LG G++   +  P+ +++   +GI + +V+AG  H 
Sbjct: 145 GNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQTSPQRVRSL--EGIPLAQVAAGGAHS 202

Query: 336 VALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGS 395
            AL  SG V+ WG    G LG  DE D+  P  +  L++   V +   +  T VL  +G 
Sbjct: 203 FALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGG 262

Query: 396 VYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV-VVTDRGRLFGF 454
           V+ FG    G LG     V+D+V  PR +  L    V+QI+ G  HT+ +V   G ++ F
Sbjct: 263 VFTFGAGSCGQLG--HDSVNDEV-NPRRVLELMGSEVTQIACGRQHTLALVPSSGLIYAF 319

Query: 455 GDNERAQLG 463
           G   + QLG
Sbjct: 320 GCGAKGQLG 328



 Score =  125 bits (315), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 97/320 (30%), Positives = 151/320 (47%), Gaps = 11/320 (3%)

Query: 119 GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
           G +   L+ +  V++CG +  G LGH  E  +     +I   +  H++ V+  E+H+  +
Sbjct: 43  GNHSVFLLEDGEVYTCGVNTKGQLGHEREGNKP---EQIGALADQHIIHVACGESHSLAL 99

Query: 179 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVH 238
              GQ+F+ G  S    G   T   +  PRL++ L      QV+ G      L   G   
Sbjct: 100 SDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFF 159

Query: 239 TCGSNTHGQLGHGDTLDRPT-PKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 297
           T G N+HGQLG G      T P+ +  LE +  + Q+AAG ++  A++ +G V+ +G  +
Sbjct: 160 TWGKNSHGQLGLGKEFPSQTSPQRVRSLEGI-PLAQVAAGGAHSFALSLSGAVFGWGMNN 218

Query: 298 NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 357
              LG  ++ D   P  ++  R +   VV +S G+EH   L  SG V+T+G G CG LGH
Sbjct: 219 AGQLGLSDEKDRESPCHVKLLRTQ--KVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGH 276

Query: 358 GDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV-DTGSVYGFGWMGFGSLGFPDRGVSD 416
               D+  P  +  L      Q+   ++ T  LV  +G +Y FG    G LG    G + 
Sbjct: 277 DSVNDEVNPRRVLELMGSEVTQIACGRQHTLALVPSSGLIYAFGCGAKGQLG---TGHTC 333

Query: 417 KVLRPRILDSLRAHHVSQIS 436
            V  P  +    A H SQ+S
Sbjct: 334 NVKCPSPVKGHWAAHSSQLS 353



 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 88/276 (31%), Positives = 132/276 (47%), Gaps = 7/276 (2%)

Query: 114 MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSAS 171
           + +  G  H+L +S+   +FS G+   G LG    T   V+  R I   +   ++QVS  
Sbjct: 87  IHVACGESHSLALSDRGQLFSWGAGSDGQLGLM-TTEDSVAVPRLIQKLNQQTILQVSCG 145

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
             H   +   GQ FT G NS    G          P+ V +L+G+P  QV AG   +  L
Sbjct: 146 NWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFAL 205

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
           ++ G V   G N  GQLG  D  DR +P  +  L     VV I+ G  +   +T +G V+
Sbjct: 206 SLSGAVFGWGMNNAGQLGLSDEKDRESPCHVK-LLRTQKVVYISCGEEHTAVLTKSGGVF 264

Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL-DSSGYVYTWGKG 350
           +FG+GS   LGH   +DE+ PR +      G  V +++ G +H +AL  SSG +Y +G G
Sbjct: 265 TFGAGSCGQLGHDSVNDEVNPRRV--LELMGSEVTQIACGRQHTLALVPSSGLIYAFGCG 322

Query: 351 YCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRK 386
             G LG G   +   P P+    +  + Q+ AR  +
Sbjct: 323 AKGQLGTGHTCNVKCPSPVKGHWAAHSSQLSARADR 358


>gi|195586891|ref|XP_002083201.1| GD13608 [Drosophila simulans]
 gi|194195210|gb|EDX08786.1| GD13608 [Drosophila simulans]
          Length = 1058

 Score =  135 bits (340), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 111/362 (30%), Positives = 171/362 (47%), Gaps = 29/362 (8%)

Query: 125 LISNSSVFSCGSSLCGVLGHG-PETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQ 183
           + S   ++  GS+  G LG G  E  Q ++  +I +     V QVS    H  F+  +G+
Sbjct: 1   MASGKELYCWGSTSHGQLGLGGIEDEQILTPRQIPWTPDTAVQQVSCGHRHTLFLTATGK 60

Query: 184 VFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 243
           V+ CG N     GH   + P  RP+L+  L+     Q++ G   +  L+  G V + G N
Sbjct: 61  VYACGSNDYSQLGH---DLPTKRPQLIPELQDYVIIQISCGSRHSLALSDWGQVLSWGDN 117

Query: 244 THGQLGHGDTLDRPTPKSIAPLEEV------GSVVQIAAGPSYMLAVTGNGVVYSFGSGS 297
             GQLGH       T K I  L +V       +VVQIA G ++ LA+T  G +YS+GS  
Sbjct: 118 DCGQLGHA------TEKEIVQLPKVVRQLVSKTVVQIACGNNHSLALTSCGELYSWGSNI 171

Query: 298 NFCLGHGEQHDELQ---PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGA 354
              LG    +D      P  + T    GI +  ++ G  H   +  SG V+ WG+  CG 
Sbjct: 172 YGQLGVNSPNDLTHCNYPLRLTTLL--GIPLAAIACGGNHSFLISKSGAVFGWGRNNCGQ 229

Query: 355 LGHGDEIDKTLPEPLSSLKSHLAVQ--VCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDR 412
           LG  DE ++  P  L +L++ L V+   C  +   F L + G V+  G   +G LG    
Sbjct: 230 LGLNDETNRAYPTQLKTLRT-LGVRFAACGDEFSVF-LTNEGGVFTCGAGAYGQLG---H 284

Query: 413 GVSDKVLRPRILDSLRAHHVSQISTGLYHTVV-VTDRGRLFGFGDNERAQLGHDTLRGCL 471
           G S   + PR++  L    ++Q++ G  HT+  V  RG+++ FG     QLG  + +  +
Sbjct: 285 GFSSNEMLPRMVMELMGSTITQVACGNRHTLAFVPSRGKVYAFGLGSSGQLGTRSTKSLM 344

Query: 472 EP 473
            P
Sbjct: 345 LP 346



 Score =  106 bits (265), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 90/301 (29%), Positives = 136/301 (45%), Gaps = 15/301 (4%)

Query: 115 QITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
           Q++ G  HTL ++ +  V++CGS+    LGH   T +      +       ++Q+S    
Sbjct: 44  QVSCGHRHTLFLTATGKVYACGSNDYSQLGHDLPTKRPQLIPELQ---DYVIIQISCGSR 100

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
           H+  +   GQV + GDN     GH      +  P++V  L      Q+  G N +  LT 
Sbjct: 101 HSLALSDWGQVLSWGDNDCGQLGHATEKEIVQLPKVVRQLVSKTVVQIACGNNHSLALTS 160

Query: 234 RGHVHTCGSNTHGQLGHGDTLDRP---TPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 290
            G +++ GSN +GQLG     D      P  +  L  +  +  IA G ++   ++ +G V
Sbjct: 161 CGELYSWGSNIYGQLGVNSPNDLTHCNYPLRLTTLLGI-PLAAIACGGNHSFLISKSGAV 219

Query: 291 YSFGSGSNFC--LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 348
             FG G N C  LG  ++ +   P  ++T R  G+     + GDE  V L + G V+T G
Sbjct: 220 --FGWGRNNCGQLGLNDETNRAYPTQLKTLRTLGVRF--AACGDEFSVFLTNEGGVFTCG 275

Query: 349 KGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDT-GSVYGFGWMGFGSL 407
            G  G LGHG   ++ LP  +  L      QV    R T   V + G VY FG    G L
Sbjct: 276 AGAYGQLGHGFSSNEMLPRMVMELMGSTITQVACGNRHTLAFVPSRGKVYAFGLGSSGQL 335

Query: 408 G 408
           G
Sbjct: 336 G 336



 Score = 95.1 bits (235), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 73/244 (29%), Positives = 112/244 (45%), Gaps = 8/244 (3%)

Query: 236 HVHTCGSNTHGQLGHGDTLDRP--TPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
            ++  GS +HGQLG G   D    TP+ I P     +V Q++ G  + L +T  G VY+ 
Sbjct: 6   ELYCWGSTSHGQLGLGGIEDEQILTPRQI-PWTPDTAVQQVSCGHRHTLFLTATGKVYAC 64

Query: 294 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 353
           GS     LGH       +P+ I   +   I  +++S G  H +AL   G V +WG   CG
Sbjct: 65  GSNDYSQLGHDLPTK--RPQLIPELQDYVI--IQISCGSRHSLALSDWGQVLSWGDNDCG 120

Query: 354 ALGHGDEIDKT-LPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDR 412
            LGH  E +   LP+ +  L S   VQ+      +  L   G +Y +G   +G LG    
Sbjct: 121 QLGHATEKEIVQLPKVVRQLVSKTVVQIACGNNHSLALTSCGELYSWGSNIYGQLGVNSP 180

Query: 413 GVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLE 472
                   P  L +L    ++ I+ G  H+ +++  G +FG+G N   QLG +       
Sbjct: 181 NDLTHCNYPLRLTTLLGIPLAAIACGGNHSFLISKSGAVFGWGRNNCGQLGLNDETNRAY 240

Query: 473 PTEI 476
           PT++
Sbjct: 241 PTQL 244



 Score = 94.7 bits (234), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 77/262 (29%), Positives = 121/262 (46%), Gaps = 15/262 (5%)

Query: 114 MQITTGRYHTLLISN-SSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +QI+ G  H+L +S+   V S G + CG LGH  E         +    +  VVQ++   
Sbjct: 93  IQISCGSRHSLALSDWGQVLSWGDNDCGQLGHATEKEIVQLPKVVRQLVSKTVVQIACGN 152

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRP-----IFRPRLVEALKGVPCKQVTAGLNF 227
           NH+  +   G++++ G N     G    N P        P  +  L G+P   +  G N 
Sbjct: 153 NHSLALTSCGELYSWGSN---IYGQLGVNSPNDLTHCNYPLRLTTLLGIPLAAIACGGNH 209

Query: 228 TGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA-GPSYMLAVTG 286
           +  ++  G V   G N  GQLG  D  +R  P  +  L  +G  V+ AA G  + + +T 
Sbjct: 210 SFLISKSGAVFGWGRNNCGQLGLNDETNRAYPTQLKTLRTLG--VRFAACGDEFSVFLTN 267

Query: 287 NGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA-LDSSGYVY 345
            G V++ G+G+   LGHG   +E+ PR +      G  + +V+ G+ H +A + S G VY
Sbjct: 268 EGGVFTCGAGAYGQLGHGFSSNEMLPRMVMELM--GSTITQVACGNRHTLAFVPSRGKVY 325

Query: 346 TWGKGYCGALGHGDEIDKTLPE 367
            +G G  G LG        LP+
Sbjct: 326 AFGLGSSGQLGTRSTKSLMLPQ 347



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 68/208 (32%), Positives = 106/208 (50%), Gaps = 10/208 (4%)

Query: 114 MQITTGRYHTL-LISNSSVFSCGSSLCGVLG-HGP-ETTQCVSFTRINFPSAAHVVQVSA 170
           +QI  G  H+L L S   ++S GS++ G LG + P + T C    R+       +  ++ 
Sbjct: 146 VQIACGNNHSLALTSCGELYSWGSNIYGQLGVNSPNDLTHCNYPLRLTTLLGIPLAAIAC 205

Query: 171 SENHAAFVLQSGQVFTCGDNSSFCCGHRD-TNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
             NH+  + +SG VF  G N+    G  D TNR    P  ++ L+ +  +    G  F+ 
Sbjct: 206 GGNHSFLISKSGAVFGWGRNNCGQLGLNDETNRAY--PTQLKTLRTLGVRFAACGDEFSV 263

Query: 230 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGN 287
           FLT  G V TCG+  +GQLGHG + +   P+ +  +E +GS + Q+A G  + LA V   
Sbjct: 264 FLTNEGGVFTCGAGAYGQLGHGFSSNEMLPRMV--MELMGSTITQVACGNRHTLAFVPSR 321

Query: 288 GVVYSFGSGSNFCLGHGEQHDELQPRAI 315
           G VY+FG GS+  LG       + P+ +
Sbjct: 322 GKVYAFGLGSSGQLGTRSTKSLMLPQVV 349


>gi|148666329|gb|EDK98745.1| hect domain and RLD 3, isoform CRA_a [Mus musculus]
          Length = 913

 Score =  135 bits (340), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 97/301 (32%), Positives = 148/301 (49%), Gaps = 29/301 (9%)

Query: 193 FCCGHRDTNRP---------IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 243
            C G+    +P         +  P++   +     K+V  G N + FL   G V+TCG N
Sbjct: 2   LCWGYWSLGQPGISSNLQGIVAEPQVCRFVSDRSIKEVACGGNHSVFLLEDGEVYTCGVN 61

Query: 244 THGQLGHGDTLDRPTPKSIAPLEEVGS-----VVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
           T GQLGH    ++P        E++G+     ++ +A G S+ LA++  G ++S+G+GS+
Sbjct: 62  TKGQLGHEREGNKP--------EQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSD 113

Query: 299 FCLGHGEQHDELQ-PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 357
             LG     D +  PR IQ   ++ I  ++VS G+ H +AL + G  +TWGK   G LG 
Sbjct: 114 GQLGLMTTEDSVAVPRLIQKLNQQTI--LQVSCGNWHCLALAADGQFFTWGKNSHGQLGL 171

Query: 358 GDEI-DKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSD 416
           G E   +T P+ + SL+     QV A    +F L  +G+V+G+G    G LG  D    +
Sbjct: 172 GKEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRE 231

Query: 417 KVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 476
               P  +  LR   V  IS G  HT V+T  G +F FG     QLGHD++   + P  +
Sbjct: 232 S---PCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSVNDEVNPRRV 288

Query: 477 F 477
            
Sbjct: 289 L 289



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 97/309 (31%), Positives = 160/309 (51%), Gaps = 14/309 (4%)

Query: 159 FPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVP 217
           F S   + +V+   NH+ F+L+ G+V+TCG N+    GH R+ N    +P  + AL    
Sbjct: 30  FVSDRSIKEVACGGNHSVFLLEDGEVYTCGVNTKGQLGHEREGN----KPEQIGALADQH 85

Query: 218 CKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDR-PTPKSIAPLEEVGSVVQIAA 276
              V  G + +  L+ RG + + G+ + GQLG   T D    P+ I  L +  +++Q++ 
Sbjct: 86  IIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQ-QTILQVSC 144

Query: 277 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH-DELQPRAIQTFRRKGIHVVRVSAGDEHV 335
           G  + LA+  +G  +++G  S+  LG G++   +  P+ +++   +GI + +V+AG  H 
Sbjct: 145 GNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQTSPQRVRSL--EGIPLAQVAAGGAHS 202

Query: 336 VALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGS 395
            AL  SG V+ WG    G LG  DE D+  P  +  L++   V +   +  T VL  +G 
Sbjct: 203 FALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGG 262

Query: 396 VYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV-VVTDRGRLFGF 454
           V+ FG    G LG     V+D+V  PR +  L    V+QI+ G  HT+ +V   G ++ F
Sbjct: 263 VFTFGAGSCGQLG--HDSVNDEV-NPRRVLELMGSEVTQIACGRQHTLALVPSSGLIYAF 319

Query: 455 GDNERAQLG 463
           G   + QLG
Sbjct: 320 GCGAKGQLG 328



 Score =  125 bits (315), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 97/320 (30%), Positives = 151/320 (47%), Gaps = 11/320 (3%)

Query: 119 GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
           G +   L+ +  V++CG +  G LGH  E  +     +I   +  H++ V+  E+H+  +
Sbjct: 43  GNHSVFLLEDGEVYTCGVNTKGQLGHEREGNKP---EQIGALADQHIIHVACGESHSLAL 99

Query: 179 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVH 238
              GQ+F+ G  S    G   T   +  PRL++ L      QV+ G      L   G   
Sbjct: 100 SDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFF 159

Query: 239 TCGSNTHGQLGHGDTLDRPT-PKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 297
           T G N+HGQLG G      T P+ +  LE +  + Q+AAG ++  A++ +G V+ +G  +
Sbjct: 160 TWGKNSHGQLGLGKEFPSQTSPQRVRSLEGI-PLAQVAAGGAHSFALSLSGAVFGWGMNN 218

Query: 298 NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 357
              LG  ++ D   P  ++  R +   VV +S G+EH   L  SG V+T+G G CG LGH
Sbjct: 219 AGQLGLSDEKDRESPCHVKLLRTQ--KVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGH 276

Query: 358 GDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV-DTGSVYGFGWMGFGSLGFPDRGVSD 416
               D+  P  +  L      Q+   ++ T  LV  +G +Y FG    G LG    G + 
Sbjct: 277 DSVNDEVNPRRVLELMGSEVTQIACGRQHTLALVPSSGLIYAFGCGAKGQLG---TGHTC 333

Query: 417 KVLRPRILDSLRAHHVSQIS 436
            V  P  +    A H SQ+S
Sbjct: 334 NVKCPSPVKGHWAAHSSQLS 353



 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 88/276 (31%), Positives = 132/276 (47%), Gaps = 7/276 (2%)

Query: 114 MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSAS 171
           + +  G  H+L +S+   +FS G+   G LG    T   V+  R I   +   ++QVS  
Sbjct: 87  IHVACGESHSLALSDRGQLFSWGAGSDGQLGLM-TTEDSVAVPRLIQKLNQQTILQVSCG 145

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
             H   +   GQ FT G NS    G          P+ V +L+G+P  QV AG   +  L
Sbjct: 146 NWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFAL 205

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
           ++ G V   G N  GQLG  D  DR +P  +  L     VV I+ G  +   +T +G V+
Sbjct: 206 SLSGAVFGWGMNNAGQLGLSDEKDRESPCHVK-LLRTQKVVYISCGEEHTAVLTKSGGVF 264

Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL-DSSGYVYTWGKG 350
           +FG+GS   LGH   +DE+ PR +      G  V +++ G +H +AL  SSG +Y +G G
Sbjct: 265 TFGAGSCGQLGHDSVNDEVNPRRV--LELMGSEVTQIACGRQHTLALVPSSGLIYAFGCG 322

Query: 351 YCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRK 386
             G LG G   +   P P+    +  + Q+ AR  +
Sbjct: 323 AKGQLGTGHTCNVKCPSPVKGHWAAHSSQLSARADR 358


>gi|158300884|ref|XP_552411.3| AGAP011823-PA [Anopheles gambiae str. PEST]
 gi|157013375|gb|EAL38855.3| AGAP011823-PA [Anopheles gambiae str. PEST]
          Length = 4947

 Score =  135 bits (340), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 86/245 (35%), Positives = 133/245 (54%), Gaps = 8/245 (3%)

Query: 235  GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEE-VGSVVQIAAGPSYMLAVTGNGVVYSF 293
            G ++ CG  T+G+LG G   + PTPK +  L + V   V + +G  + +A+T +G V+S+
Sbjct: 3080 GKLYACGEGTNGRLGLGHNNNVPTPKQVPILSQYVVKKVAVHSGGKHAMALTLDGKVFSW 3139

Query: 294  GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 353
            G G +  LGHG +    +P+ I+T R K I    ++ G  H  A+ SSG +YTWG G  G
Sbjct: 3140 GEGEDGKLGHGNRLTLEKPKLIETLRTKRIR--DIACGSSHSAAITSSGELYTWGLGEYG 3197

Query: 354  ALGHGDEIDKTLPEPLSSLKSHLAVQVC--ARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 411
             LGHGD   +  P+ +++L+ H  VQV   +R  +T  L + G V+ +G   FG LG   
Sbjct: 3198 RLGHGDNCTQLKPKLVTALQDHRVVQVACGSRDAQTLCLTEDGLVFSWGDGDFGKLG--- 3254

Query: 412  RGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCL 471
            RG S+    P  +D L    V QI  G   ++ +T  G ++ +G  +  +LGH T +   
Sbjct: 3255 RGGSEGCSIPHQVDRLNGVGVMQIECGAQFSLALTKAGEVWTWGKGDYYRLGHGTDQHVR 3314

Query: 472  EPTEI 476
            +PT I
Sbjct: 3315 KPTPI 3319



 Score =  127 bits (318), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 104/349 (29%), Positives = 165/349 (47%), Gaps = 12/349 (3%)

Query: 129  SSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCG 188
            S++F  G +  G LG G + ++  + T     S    +Q++  E     V   G+++  G
Sbjct: 4089 STIFGWGHNHRGQLG-GLDGSRIKNPTPCEALSLLRPIQIAGGEQTLYAVTPDGKLYATG 4147

Query: 189  DNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQV--TAGLNFTGFLTIRGHVHTCGSNTHG 246
              +    G   T+  +  P LVE+L+ V  K+V   +G      L+  G V + G    G
Sbjct: 4148 YGAGGRLGVGGTDS-VTTPTLVESLQHVMIKKVAVNSGGKHCLALSSDGEVFSWGEGEDG 4206

Query: 247  QLGHG--DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHG 304
            +LGHG  D+ DRP  K I  L  +G VV IA G ++   +T  G V ++G G    LGHG
Sbjct: 4207 KLGHGNRDSYDRP--KLIESLSGIG-VVDIACGSAHSACITIQGHVLTWGKGRYGRLGHG 4263

Query: 305  EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKT 364
            +  D+LQP+ ++         +   +GD   + +     V++WG G  G LG G      
Sbjct: 4264 DSEDQLQPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGCK 4323

Query: 365  LPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRIL 424
            +P  + SL      +V    + +  L  +GSVY +G   +  LG    G +D V RP+ +
Sbjct: 4324 VPMKIESLAGLGVTKVECGSQFSVALTRSGSVYTWGKGDYHRLG---HGNTDHVRRPKKV 4380

Query: 425  DSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEP 473
             +L+   +  I+TG  H V  +D G +F +GDN+  QLG  T+     P
Sbjct: 4381 AALQGKKIISIATGSLHCVACSDAGEVFTWGDNDEGQLGDGTVSAIQRP 4429



 Score =  126 bits (316), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 86/283 (30%), Positives = 140/283 (49%), Gaps = 9/283 (3%)

Query: 166  VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIF-RPRLVEALKGVPCKQVTAG 224
            V V++   H   +   G+VF+ G+      GH   NR  + RP+L+E+L G+    +  G
Sbjct: 4179 VAVNSGGKHCLALSSDGEVFSWGEGEDGKLGH--GNRDSYDRPKLIESLSGIGVVDIACG 4236

Query: 225  LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSV-VQIAAGPSYMLA 283
               +  +TI+GHV T G   +G+LGHGD+ D+  PK +  L    ++ +   +G +  L 
Sbjct: 4237 SAHSACITIQGHVLTWGKGRYGRLGHGDSEDQLQPKLVEALLGYRAIDIACGSGDAQTLC 4296

Query: 284  VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 343
            +T +  V+S+G G    LG G       P  I++    G+ V +V  G +  VAL  SG 
Sbjct: 4297 ITDDDNVWSWGDGDYGKLGRGGSDGCKVPMKIESL--AGLGVTKVECGSQFSVALTRSGS 4354

Query: 344  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 403
            VYTWGKG    LGHG+      P+ +++L+    + +           D G V+ +G   
Sbjct: 4355 VYTWGKGDYHRLGHGNTDHVRRPKKVAALQGKKIISIATGSLHCVACSDAGEVFTWGDND 4414

Query: 404  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT 446
             G LG    G    + RPR++ SL+  H+ ++  G  HT+ ++
Sbjct: 4415 EGQLG---DGTVSAIQRPRLVQSLQGKHIVKVICGSAHTLALS 4454



 Score =  122 bits (305), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 86/319 (26%), Positives = 144/319 (45%), Gaps = 17/319 (5%)

Query: 155  TRINFPSAAHV------VQVSASENHAAFVLQSGQVFTCGD--NSSFCCGHRDTNRPIFR 206
            +++  P+ + V      + ++        V Q G+++ CG+  N     GH   N  +  
Sbjct: 3047 SKVKLPTYSSVLSQLKPIHIAGGSKSLFIVSQDGKLYACGEGTNGRLGLGH---NNNVPT 3103

Query: 207  PRLVEALKGVPCKQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP 264
            P+ V  L     K+V   +G      LT+ G V + G    G+LGHG+ L    PK I  
Sbjct: 3104 PKQVPILSQYVVKKVAVHSGGKHAMALTLDGKVFSWGEGEDGKLGHGNRLTLEKPKLIET 3163

Query: 265  LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH 324
            L     +  IA G S+  A+T +G +Y++G G    LGHG+   +L+P+ +   +   + 
Sbjct: 3164 LR-TKRIRDIACGSSHSAAITSSGELYTWGLGEYGRLGHGDNCTQLKPKLVTALQDHRVV 3222

Query: 325  VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARK 384
             V   + D   + L   G V++WG G  G LG G     ++P  +  L     +Q+    
Sbjct: 3223 QVACGSRDAQTLCLTEDGLVFSWGDGDFGKLGRGGSEGCSIPHQVDRLNGVGVMQIECGA 3282

Query: 385  RKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV 444
            + +  L   G V+ +G   +  LG    G    V +P  +  LR   V  ++ G  H + 
Sbjct: 3283 QFSLALTKAGEVWTWGKGDYYRLG---HGTDQHVRKPTPIQGLRGKKVIHVAVGALHCLA 3339

Query: 445  VTDRGRLFGFGDNERAQLG 463
            VTD G+++ +GDN+  Q G
Sbjct: 3340 VTDSGQVYAWGDNDHGQQG 3358



 Score =  112 bits (281), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 94/339 (27%), Positives = 157/339 (46%), Gaps = 21/339 (6%)

Query: 114  MQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHG-----PETTQCVSFTRINFPSAAHVVQ 167
            + I  G     ++S +  +++CG    G LG G     P   Q    ++         V 
Sbjct: 3064 IHIAGGSKSLFIVSQDGKLYACGEGTNGRLGLGHNNNVPTPKQVPILSQY----VVKKVA 3119

Query: 168  VSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNR-PIFRPRLVEALKGVPCKQVTAGLN 226
            V +   HA  +   G+VF+ G+      GH   NR  + +P+L+E L+    + +  G +
Sbjct: 3120 VHSGGKHAMALTLDGKVFSWGEGEDGKLGH--GNRLTLEKPKLIETLRTKRIRDIACGSS 3177

Query: 227  FTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGP--SYMLAV 284
             +  +T  G ++T G   +G+LGHGD   +  PK +  L++   VVQ+A G   +  L +
Sbjct: 3178 HSAAITSSGELYTWGLGEYGRLGHGDNCTQLKPKLVTALQD-HRVVQVACGSRDAQTLCL 3236

Query: 285  TGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
            T +G+V+S+G G    LG G       P   Q  R  G+ V+++  G +  +AL  +G V
Sbjct: 3237 TEDGLVFSWGDGDFGKLGRGGSEGCSIPH--QVDRLNGVGVMQIECGAQFSLALTKAGEV 3294

Query: 345  YTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGF 404
            +TWGKG    LGHG +     P P+  L+    + V         + D+G VY +G    
Sbjct: 3295 WTWGKGDYYRLGHGTDQHVRKPTPIQGLRGKKVIHVAVGALHCLAVTDSGQVYAWGDNDH 3354

Query: 405  GSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV 443
            G  G  +  V+ K   P ++  L    V++++ G  H+V
Sbjct: 3355 GQQGSGNTIVNKK---PSLVLGLDGIFVNRVACGSSHSV 3390



 Score =  109 bits (273), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 83/303 (27%), Positives = 138/303 (45%), Gaps = 19/303 (6%)

Query: 164 HVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTA 223
            V Q+  +EN    +  SG V       S      + N P         +KG+ C  V  
Sbjct: 564 QVRQIVCAENCVYILTDSGTVLYL----SHAISMTEDNYP-------AQVKGLECTIVQL 612

Query: 224 GLNFTG----FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPS 279
             +  G     L   G V++ GS   G+LGHGDT  +  P  IA L +   V  +  G S
Sbjct: 613 AAHCEGRHVLALASSGDVYSWGSGDGGRLGHGDTSAKELPTRIAALAD-RQVTGVFCGSS 671

Query: 280 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 339
           Y  A+T +G +Y++G G+   LGHG   D+  P  +   +   +  V +  GD H + + 
Sbjct: 672 YSAAITASGELYTWGRGTYGRLGHGNSEDKYVPTLVTALKAHRVVHVALGCGDAHSLCVT 731

Query: 340 SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGF 399
            +G  + WG G  G LG+   +  ++P  +   ++   V+V +  + +  L   G+VY +
Sbjct: 732 EAGLAFAWGDGDFGKLGNESCVGTSVPVQVDLPQASCVVKVFSGSQFSVALTREGTVYTW 791

Query: 400 GWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNER 459
           G    G LG    G S+    P+++ +L    +  ++ GL H + +T  G L+G+G N+ 
Sbjct: 792 GKGHGGRLG---HGNSEHSPVPKMVQALEGKKIVDLAVGLAHCLALTASGELYGWGRNDF 848

Query: 460 AQL 462
            Q+
Sbjct: 849 QQI 851



 Score =  102 bits (253), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 82/303 (27%), Positives = 142/303 (46%), Gaps = 12/303 (3%)

Query: 149 TQCVSFTRINFPSAAH-----VVQVSA--SENHAAFVLQSGQVFTCGDNSSFCCGHRDTN 201
           +  +S T  N+P+        +VQ++A     H   +  SG V++ G       GH DT+
Sbjct: 588 SHAISMTEDNYPAQVKGLECTIVQLAAHCEGRHVLALASSGDVYSWGSGDGGRLGHGDTS 647

Query: 202 RPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKS 261
                P  + AL       V  G +++  +T  G ++T G  T+G+LGHG++ D+  P  
Sbjct: 648 AKEL-PTRIAALADRQVTGVFCGSSYSAAITASGELYTWGRGTYGRLGHGNSEDKYVPTL 706

Query: 262 IAPLEEVGSV-VQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRR 320
           +  L+    V V +  G ++ L VT  G+ +++G G    LG+        P  +Q    
Sbjct: 707 VTALKAHRVVHVALGCGDAHSLCVTEAGLAFAWGDGDFGKLGNESCVGTSVP--VQVDLP 764

Query: 321 KGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQV 380
           +   VV+V +G +  VAL   G VYTWGKG+ G LGHG+     +P+ + +L+    V +
Sbjct: 765 QASCVVKVFSGSQFSVALTREGTVYTWGKGHGGRLGHGNSEHSPVPKMVQALEGKKIVDL 824

Query: 381 CARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLY 440
                    L  +G +YG+G   F  +  P+    D ++   IL +     V+ ++ G+ 
Sbjct: 825 AVGLAHCLALTASGELYGWGRNDFQQI-CPECVTRDPIITAPILTTPPTLRVAGMAAGVA 883

Query: 441 HTV 443
            ++
Sbjct: 884 QSL 886



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 67/248 (27%), Positives = 122/248 (49%), Gaps = 10/248 (4%)

Query: 233  IRGHVHTCGSNTHGQLG--HGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 290
            +   V   G N   QLG   G  +  PT  S+  L ++  +  IA G   +  V+ +G +
Sbjct: 3026 VSSKVLVWGLNDKEQLGGLKGSKVKLPTYSSV--LSQLKPI-HIAGGSKSLFIVSQDGKL 3082

Query: 291  YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKG 350
            Y+ G G+N  LG G  ++   P+ +    +  +  V V +G +H +AL   G V++WG+G
Sbjct: 3083 YACGEGTNGRLGLGHNNNVPTPKQVPILSQYVVKKVAVHSGGKHAMALTLDGKVFSWGEG 3142

Query: 351  YCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFP 410
              G LGHG+ +    P+ + +L++     +      +  +  +G +Y +G   +G LG  
Sbjct: 3143 EDGKLGHGNRLTLEKPKLIETLRTKRIRDIACGSSHSAAITSSGELYTWGLGEYGRLGHG 3202

Query: 411  DRGVSDKVLRPRILDSLRAHHVSQISTGL--YHTVVVTDRGRLFGFGDNERAQLGHDTLR 468
            D       L+P+++ +L+ H V Q++ G     T+ +T+ G +F +GD +  +LG     
Sbjct: 3203 DNCTQ---LKPKLVTALQDHRVVQVACGSRDAQTLCLTEDGLVFSWGDGDFGKLGRGGSE 3259

Query: 469  GCLEPTEI 476
            GC  P ++
Sbjct: 3260 GCSIPHQV 3267



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 84/284 (29%), Positives = 125/284 (44%), Gaps = 14/284 (4%)

Query: 113  NMQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTR---INFPSAAHVVQV 168
             + + +G  H L L S+  VFS G    G LGHG       S+ R   I   S   VV +
Sbjct: 4178 KVAVNSGGKHCLALSSDGEVFSWGEGEDGKLGHGNRD----SYDRPKLIESLSGIGVVDI 4233

Query: 169  SASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFT 228
            +    H+A +   G V T G       GH D+   + +P+LVEAL G     +  G    
Sbjct: 4234 ACGSAHSACITIQGHVLTWGKGRYGRLGHGDSEDQL-QPKLVEALLGYRAIDIACGSGDA 4292

Query: 229  GFLTIRG--HVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTG 286
              L I    +V + G   +G+LG G +     P  I  L  +G V ++  G  + +A+T 
Sbjct: 4293 QTLCITDDDNVWSWGDGDYGKLGRGGSDGCKVPMKIESLAGLG-VTKVECGSQFSVALTR 4351

Query: 287  NGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYT 346
            +G VY++G G    LGHG      +P+ +     +G  ++ ++ G  H VA   +G V+T
Sbjct: 4352 SGSVYTWGKGDYHRLGHGNTDHVRRPKKVAAL--QGKKIISIATGSLHCVACSDAGEVFT 4409

Query: 347  WGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVL 390
            WG    G LG G       P  + SL+    V+V      T  L
Sbjct: 4410 WGDNDEGQLGDGTVSAIQRPRLVQSLQGKHIVKVICGSAHTLAL 4453



 Score = 91.3 bits (225), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 72/241 (29%), Positives = 120/241 (49%), Gaps = 12/241 (4%)

Query: 241  GSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 297
            G N  GQLG   G  +  PTP ++++ L  +    QIA G   + AVT +G +Y+ G G+
Sbjct: 4095 GHNHRGQLGGLDGSRIKNPTPCEALSLLRPI----QIAGGEQTLYAVTPDGKLYATGYGA 4150

Query: 298  NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 357
               LG G       P  +++ +   I  V V++G +H +AL S G V++WG+G  G LGH
Sbjct: 4151 GGRLGVGGTDSVTTPTLVESLQHVMIKKVAVNSGGKHCLALSSDGEVFSWGEGEDGKLGH 4210

Query: 358  GDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDK 417
            G+      P+ + SL     V +      +  +   G V  +G   +G LG  D   S+ 
Sbjct: 4211 GNRDSYDRPKLIESLSGIGVVDIACGSAHSACITIQGHVLTWGKGRYGRLGHGD---SED 4267

Query: 418  VLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTE 475
             L+P+++++L  +    I+  +G   T+ +TD   ++ +GD +  +LG     GC  P +
Sbjct: 4268 QLQPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKVPMK 4327

Query: 476  I 476
            I
Sbjct: 4328 I 4328



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 68/233 (29%), Positives = 110/233 (47%), Gaps = 7/233 (3%)

Query: 119 GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
           GR+   L S+  V+S GS   G LGHG  + + +  TRI   +   V  V    +++A +
Sbjct: 618 GRHVLALASSGDVYSWGSGDGGRLGHGDTSAKELP-TRIAALADRQVTGVFCGSSYSAAI 676

Query: 179 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR--GH 236
             SG+++T G  +    GH ++    + P LV ALK      V  G      L +   G 
Sbjct: 677 TASGELYTWGRGTYGRLGHGNSEDK-YVPTLVTALKAHRVVHVALGCGDAHSLCVTEAGL 735

Query: 237 VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 296
               G    G+LG+   +    P  +  L +   VV++ +G  + +A+T  G VY++G G
Sbjct: 736 AFAWGDGDFGKLGNESCVGTSVPVQVD-LPQASCVVKVFSGSQFSVALTREGTVYTWGKG 794

Query: 297 SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 349
               LGHG       P+ +Q    +G  +V ++ G  H +AL +SG +Y WG+
Sbjct: 795 HGGRLGHGNSEHSPVPKMVQAL--EGKKIVDLAVGLAHCLALTASGELYGWGR 845



 Score = 79.0 bits (193), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 48/145 (33%), Positives = 77/145 (53%), Gaps = 5/145 (3%)

Query: 334 HVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDT 393
           HV+AL SSG VY+WG G  G LGHGD   K LP  +++L       V      +  +  +
Sbjct: 620 HVLALASSGDVYSWGSGDGGRLGHGDTSAKELPTRIAALADRQVTGVFCGSSYSAAITAS 679

Query: 394 GSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGL--YHTVVVTDRGRL 451
           G +Y +G   +G LG    G S+    P ++ +L+AH V  ++ G    H++ VT+ G  
Sbjct: 680 GELYTWGRGTYGRLG---HGNSEDKYVPTLVTALKAHRVVHVALGCGDAHSLCVTEAGLA 736

Query: 452 FGFGDNERAQLGHDTLRGCLEPTEI 476
           F +GD +  +LG+++  G   P ++
Sbjct: 737 FAWGDGDFGKLGNESCVGTSVPVQV 761


>gi|21711763|gb|AAM75072.1| RE53774p [Drosophila melanogaster]
          Length = 1058

 Score =  135 bits (339), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 108/360 (30%), Positives = 168/360 (46%), Gaps = 25/360 (6%)

Query: 125 LISNSSVFSCGSSLCGVLGHG-PETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQ 183
           + S   ++  GS+  G LG G  E  Q ++ ++I +     V QV+    H  F+  +G+
Sbjct: 1   MASGKELYCWGSTSHGQLGLGGIEDEQILTPSQIPWTPDTAVQQVACGHRHTLFLTATGK 60

Query: 184 VFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 243
           V+ CG N     GH   + P  RP L+  L+     Q+  G   +  L+  G V + G N
Sbjct: 61  VYACGSNDYSQLGH---DLPTKRPLLIPELQDYVIIQICCGSRHSLALSDWGQVLSWGDN 117

Query: 244 THGQLGHGDTLDRPTPKSIAPLEEV------GSVVQIAAGPSYMLAVTGNGVVYSFGSGS 297
             GQLGH       T K I  L +V       +VVQIA G ++ LA+T  G +YS+GS  
Sbjct: 118 DCGQLGHA------TDKEIVQLPKVVRQLVTKTVVQIACGNNHSLALTSCGELYSWGSNI 171

Query: 298 NFCLGHGEQHDELQ---PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGA 354
              LG    +D      P  + T    GI +  ++ G  H   +  SG V+ WG+  CG 
Sbjct: 172 YGQLGVNSPNDLTHCNYPLRLTTLL--GIPLAAIACGGNHSFLISKSGAVFGWGRNNCGQ 229

Query: 355 LGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGV 414
           LG  DE +++ P  L +L++     V      +  L + G V+  G   +G LG    G 
Sbjct: 230 LGLNDETNRSYPTQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGAYGQLG---HGF 286

Query: 415 SDKVLRPRILDSLRAHHVSQISTGLYHTV-VVTDRGRLFGFGDNERAQLGHDTLRGCLEP 473
           S   + PR++  L    ++Q++ G  HT+ +V  RGR++ FG     QLG  + +  + P
Sbjct: 287 SSNEMLPRMVMELMGSTITQVACGNRHTLALVPSRGRVYAFGLGSSGQLGTRSTKSLMLP 346



 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 91/301 (30%), Positives = 137/301 (45%), Gaps = 15/301 (4%)

Query: 115 QITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
           Q+  G  HTL ++ +  V++CGS+    LGH   T + +    +       ++Q+     
Sbjct: 44  QVACGHRHTLFLTATGKVYACGSNDYSQLGHDLPTKRPLLIPELQ---DYVIIQICCGSR 100

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
           H+  +   GQV + GDN     GH      +  P++V  L      Q+  G N +  LT 
Sbjct: 101 HSLALSDWGQVLSWGDNDCGQLGHATDKEIVQLPKVVRQLVTKTVVQIACGNNHSLALTS 160

Query: 234 RGHVHTCGSNTHGQLGHGDTLDRP---TPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 290
            G +++ GSN +GQLG     D      P  +  L  +  +  IA G ++   ++ +G V
Sbjct: 161 CGELYSWGSNIYGQLGVNSPNDLTHCNYPLRLTTLLGI-PLAAIACGGNHSFLISKSGAV 219

Query: 291 YSFGSGSNFC--LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 348
             FG G N C  LG  ++ +   P  ++T R  G+    V+ GDE  V L + G V+T G
Sbjct: 220 --FGWGRNNCGQLGLNDETNRSYPTQLKTLRTLGVRF--VACGDEFSVFLTNEGGVFTCG 275

Query: 349 KGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDT-GSVYGFGWMGFGSL 407
            G  G LGHG   ++ LP  +  L      QV    R T  LV + G VY FG    G L
Sbjct: 276 AGAYGQLGHGFSSNEMLPRMVMELMGSTITQVACGNRHTLALVPSRGRVYAFGLGSSGQL 335

Query: 408 G 408
           G
Sbjct: 336 G 336



 Score = 94.7 bits (234), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 76/261 (29%), Positives = 118/261 (45%), Gaps = 13/261 (4%)

Query: 114 MQITTGRYHTLLISN-SSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +QI  G  H+L +S+   V S G + CG LGH  +         +       VVQ++   
Sbjct: 93  IQICCGSRHSLALSDWGQVLSWGDNDCGQLGHATDKEIVQLPKVVRQLVTKTVVQIACGN 152

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRP-----IFRPRLVEALKGVPCKQVTAGLNF 227
           NH+  +   G++++ G N     G    N P        P  +  L G+P   +  G N 
Sbjct: 153 NHSLALTSCGELYSWGSN---IYGQLGVNSPNDLTHCNYPLRLTTLLGIPLAAIACGGNH 209

Query: 228 TGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN 287
           +  ++  G V   G N  GQLG  D  +R  P  +  L  +G V  +A G  + + +T  
Sbjct: 210 SFLISKSGAVFGWGRNNCGQLGLNDETNRSYPTQLKTLRTLG-VRFVACGDEFSVFLTNE 268

Query: 288 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL-DSSGYVYT 346
           G V++ G+G+   LGHG   +E+ PR +      G  + +V+ G+ H +AL  S G VY 
Sbjct: 269 GGVFTCGAGAYGQLGHGFSSNEMLPRMVMELM--GSTITQVACGNRHTLALVPSRGRVYA 326

Query: 347 WGKGYCGALGHGDEIDKTLPE 367
           +G G  G LG        LP+
Sbjct: 327 FGLGSSGQLGTRSTKSLMLPQ 347



 Score = 92.4 bits (228), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 71/244 (29%), Positives = 109/244 (44%), Gaps = 8/244 (3%)

Query: 236 HVHTCGSNTHGQLGHGDTLDRP--TPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
            ++  GS +HGQLG G   D    TP  I P     +V Q+A G  + L +T  G VY+ 
Sbjct: 6   ELYCWGSTSHGQLGLGGIEDEQILTPSQI-PWTPDTAVQQVACGHRHTLFLTATGKVYAC 64

Query: 294 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 353
           GS     LGH    D    R +     +   ++++  G  H +AL   G V +WG   CG
Sbjct: 65  GSNDYSQLGH----DLPTKRPLLIPELQDYVIIQICCGSRHSLALSDWGQVLSWGDNDCG 120

Query: 354 ALGHG-DEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDR 412
            LGH  D+    LP+ +  L +   VQ+      +  L   G +Y +G   +G LG    
Sbjct: 121 QLGHATDKEIVQLPKVVRQLVTKTVVQIACGNNHSLALTSCGELYSWGSNIYGQLGVNSP 180

Query: 413 GVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLE 472
                   P  L +L    ++ I+ G  H+ +++  G +FG+G N   QLG +       
Sbjct: 181 NDLTHCNYPLRLTTLLGIPLAAIACGGNHSFLISKSGAVFGWGRNNCGQLGLNDETNRSY 240

Query: 473 PTEI 476
           PT++
Sbjct: 241 PTQL 244



 Score = 81.6 bits (200), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 69/208 (33%), Positives = 107/208 (51%), Gaps = 10/208 (4%)

Query: 114 MQITTGRYHTL-LISNSSVFSCGSSLCGVLG-HGP-ETTQCVSFTRINFPSAAHVVQVSA 170
           +QI  G  H+L L S   ++S GS++ G LG + P + T C    R+       +  ++ 
Sbjct: 146 VQIACGNNHSLALTSCGELYSWGSNIYGQLGVNSPNDLTHCNYPLRLTTLLGIPLAAIAC 205

Query: 171 SENHAAFVLQSGQVFTCGDNSSFCCGHRD-TNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
             NH+  + +SG VF  G N+    G  D TNR    P  ++ L+ +  + V  G  F+ 
Sbjct: 206 GGNHSFLISKSGAVFGWGRNNCGQLGLNDETNRSY--PTQLKTLRTLGVRFVACGDEFSV 263

Query: 230 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGN 287
           FLT  G V TCG+  +GQLGHG + +   P+ +  +E +GS + Q+A G  + LA V   
Sbjct: 264 FLTNEGGVFTCGAGAYGQLGHGFSSNEMLPRMV--MELMGSTITQVACGNRHTLALVPSR 321

Query: 288 GVVYSFGSGSNFCLGHGEQHDELQPRAI 315
           G VY+FG GS+  LG       + P+ +
Sbjct: 322 GRVYAFGLGSSGQLGTRSTKSLMLPQVV 349


>gi|195126363|ref|XP_002007640.1| GI13052 [Drosophila mojavensis]
 gi|193919249|gb|EDW18116.1| GI13052 [Drosophila mojavensis]
          Length = 1053

 Score =  135 bits (339), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 109/341 (31%), Positives = 165/341 (48%), Gaps = 19/341 (5%)

Query: 131 VFSCGSSLCGVLGHG-PETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGD 189
           ++  G++  G LG G  E  Q ++ +RI +   + V Q++    H  F+  SG+V+ CG 
Sbjct: 3   LYCWGNASHGQLGLGGIEEEQILTPSRIPWKPDSAVNQIACGHRHTLFLTASGKVYACGS 62

Query: 190 NSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLG 249
           N     GH     P  RP  +  L+     Q+  G   +  L+  G V + G N  GQLG
Sbjct: 63  NDYSQLGHE---LPTKRPLQIPELQDYVITQIACGSRHSMALSEWGQVFSWGDNECGQLG 119

Query: 250 HGDTLD-RPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHD 308
           H    D    PK +  L    +VVQIA G ++ LA+T  G +YS+GS     LG    +D
Sbjct: 120 HASDQDIVKLPKIVRNLVS-KTVVQIACGSNHSLALTCCGELYSWGSNLYGQLGVSSPND 178

Query: 309 ELQ---PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTL 365
             Q   P  + T    GI V  ++ G  H   +  S  V+ WG+  CG LG  DE ++  
Sbjct: 179 LQQSNTPMRLTTLL--GIPVSAIACGGNHSFLISKSSAVFGWGRNNCGQLGLNDETNRAY 236

Query: 366 PEPLSSLKSHLAVQ--VCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRI 423
           P  L +L++ L V+   C  +   F+ ++ G V+  G   +G LG    G S   + PR+
Sbjct: 237 PTQLKTLRT-LGVRFVACGDEFSVFLTIE-GGVFTCGAGAYGQLG---HGFSSNEMLPRM 291

Query: 424 LDSLRAHHVSQISTGLYHTV-VVTDRGRLFGFGDNERAQLG 463
           +  L    +SQ++ G  HT+ +V  RGR++GFG     QLG
Sbjct: 292 VMELMGSTISQVACGNRHTLALVPSRGRIYGFGLGSSGQLG 332



 Score =  115 bits (289), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 95/301 (31%), Positives = 139/301 (46%), Gaps = 15/301 (4%)

Query: 115 QITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
           QI  G  HTL ++ S  V++CGS+    LGH   T + +    +       + Q++    
Sbjct: 40  QIACGHRHTLFLTASGKVYACGSNDYSQLGHELPTKRPLQIPEL---QDYVITQIACGSR 96

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
           H+  + + GQVF+ GDN     GH      +  P++V  L      Q+  G N +  LT 
Sbjct: 97  HSMALSEWGQVFSWGDNECGQLGHASDQDIVKLPKIVRNLVSKTVVQIACGSNHSLALTC 156

Query: 234 RGHVHTCGSNTHGQLG---HGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 290
            G +++ GSN +GQLG     D     TP  +  L  +  V  IA G ++   ++ +  V
Sbjct: 157 CGELYSWGSNLYGQLGVSSPNDLQQSNTPMRLTTLLGI-PVSAIACGGNHSFLISKSSAV 215

Query: 291 YSFGSGSNFC--LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 348
             FG G N C  LG  ++ +   P  ++T R  G+    V+ GDE  V L   G V+T G
Sbjct: 216 --FGWGRNNCGQLGLNDETNRAYPTQLKTLRTLGVRF--VACGDEFSVFLTIEGGVFTCG 271

Query: 349 KGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDT-GSVYGFGWMGFGSL 407
            G  G LGHG   ++ LP  +  L      QV    R T  LV + G +YGFG    G L
Sbjct: 272 AGAYGQLGHGFSSNEMLPRMVMELMGSTISQVACGNRHTLALVPSRGRIYGFGLGSSGQL 331

Query: 408 G 408
           G
Sbjct: 332 G 332



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 74/245 (30%), Positives = 115/245 (46%), Gaps = 10/245 (4%)

Query: 236 HVHTCGSNTHGQLGHGDTLDRP--TPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
            ++  G+ +HGQLG G   +    TP  I P +   +V QIA G  + L +T +G VY+ 
Sbjct: 2   ELYCWGNASHGQLGLGGIEEEQILTPSRI-PWKPDSAVNQIACGHRHTLFLTASGKVYAC 60

Query: 294 GSGSNFCLGHGEQHDEL-QPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 352
           GS     LGH     EL   R +Q    +   + +++ G  H +AL   G V++WG   C
Sbjct: 61  GSNDYSQLGH-----ELPTKRPLQIPELQDYVITQIACGSRHSMALSEWGQVFSWGDNEC 115

Query: 353 GALGHGDEIDKT-LPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 411
           G LGH  + D   LP+ + +L S   VQ+      +  L   G +Y +G   +G LG   
Sbjct: 116 GQLGHASDQDIVKLPKIVRNLVSKTVVQIACGSNHSLALTCCGELYSWGSNLYGQLGVSS 175

Query: 412 RGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCL 471
                +   P  L +L    VS I+ G  H+ +++    +FG+G N   QLG +      
Sbjct: 176 PNDLQQSNTPMRLTTLLGIPVSAIACGGNHSFLISKSSAVFGWGRNNCGQLGLNDETNRA 235

Query: 472 EPTEI 476
            PT++
Sbjct: 236 YPTQL 240



 Score = 53.1 bits (126), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 47/149 (31%), Positives = 68/149 (45%), Gaps = 4/149 (2%)

Query: 116 ITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           I  G  H+ LIS SS VF  G + CG LG   ET +    T++       V  V+  +  
Sbjct: 199 IACGGNHSFLISKSSAVFGWGRNNCGQLGLNDETNRAYP-TQLKTLRTLGVRFVACGDEF 257

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFT-GFLTI 233
           + F+   G VFTCG  +    GH  ++  +  PR+V  L G    QV  G   T   +  
Sbjct: 258 SVFLTIEGGVFTCGAGAYGQLGHGFSSNEML-PRMVMELMGSTISQVACGNRHTLALVPS 316

Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPTPKSI 262
           RG ++  G  + GQLG  +T     P+ +
Sbjct: 317 RGRIYGFGLGSSGQLGTRNTKSLNLPQLV 345


>gi|157820833|ref|NP_001102101.1| probable E3 ubiquitin-protein ligase HERC3 [Rattus norvegicus]
 gi|149033223|gb|EDL88024.1| hect domain and RLD 3 (predicted), isoform CRA_a [Rattus
           norvegicus]
 gi|149033224|gb|EDL88025.1| hect domain and RLD 3 (predicted), isoform CRA_a [Rattus
           norvegicus]
 gi|149033225|gb|EDL88026.1| hect domain and RLD 3 (predicted), isoform CRA_a [Rattus
           norvegicus]
          Length = 1050

 Score =  135 bits (339), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 97/301 (32%), Positives = 148/301 (49%), Gaps = 29/301 (9%)

Query: 193 FCCGHRDTNRP---------IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 243
            C G+    +P         +  P++   +     K+V  G N + FL   G V+TCG N
Sbjct: 2   LCWGYWSLGQPGISSNLQGIVAEPQVCRFVSDRSIKEVACGGNHSVFLLEDGEVYTCGVN 61

Query: 244 THGQLGHGDTLDRPTPKSIAPLEEVGS-----VVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
           T GQLGH    ++P        E++G+     ++ +A G S+ LA++  G ++S+G+GS+
Sbjct: 62  TKGQLGHEREGNKP--------EQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSD 113

Query: 299 FCLGHGEQHDELQ-PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 357
             LG     D +  PR IQ   ++ I  ++VS G+ H +AL + G  +TWGK   G LG 
Sbjct: 114 GQLGLMTTEDSVAVPRLIQKLNQQTI--LQVSCGNWHCLALAADGQFFTWGKNSHGQLGL 171

Query: 358 GDEI-DKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSD 416
           G E   +T P+ + SL+     QV A    +F L  +G+V+G+G    G LG  D    +
Sbjct: 172 GKEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRE 231

Query: 417 KVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 476
               P  +  LR   V  IS G  HT V+T  G +F FG     QLGHD++   + P  +
Sbjct: 232 S---PCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSVNDEVNPRRV 288

Query: 477 F 477
            
Sbjct: 289 L 289



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 97/309 (31%), Positives = 160/309 (51%), Gaps = 14/309 (4%)

Query: 159 FPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVP 217
           F S   + +V+   NH+ F+L+ G+V+TCG N+    GH R+ N    +P  + AL    
Sbjct: 30  FVSDRSIKEVACGGNHSVFLLEDGEVYTCGVNTKGQLGHEREGN----KPEQIGALADQH 85

Query: 218 CKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDR-PTPKSIAPLEEVGSVVQIAA 276
              V  G + +  L+ RG + + G+ + GQLG   T D    P+ I  L +  +++Q++ 
Sbjct: 86  IIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQ-QTILQVSC 144

Query: 277 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH-DELQPRAIQTFRRKGIHVVRVSAGDEHV 335
           G  + LA+  +G  +++G  S+  LG G++   +  P+ +++   +GI + +V+AG  H 
Sbjct: 145 GNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQTSPQRVRSL--EGIPLAQVAAGGAHS 202

Query: 336 VALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGS 395
            AL  SG V+ WG    G LG  DE D+  P  +  L++   V +   +  T VL  +G 
Sbjct: 203 FALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGG 262

Query: 396 VYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV-VVTDRGRLFGF 454
           V+ FG    G LG     V+D+V  PR +  L    V+QI+ G  HT+ +V   G ++ F
Sbjct: 263 VFTFGAGSCGQLG--HDSVNDEV-NPRRVLELMGSEVTQIACGRQHTLALVPSSGLIYAF 319

Query: 455 GDNERAQLG 463
           G   + QLG
Sbjct: 320 GCGAKGQLG 328



 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 89/292 (30%), Positives = 140/292 (47%), Gaps = 8/292 (2%)

Query: 119 GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
           G +   L+ +  V++CG +  G LGH  E  +     +I   +  H++ V+  E+H+  +
Sbjct: 43  GNHSVFLLEDGEVYTCGVNTKGQLGHEREGNKP---EQIGALADQHIIHVACGESHSLAL 99

Query: 179 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVH 238
              GQ+F+ G  S    G   T   +  PRL++ L      QV+ G      L   G   
Sbjct: 100 SDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFF 159

Query: 239 TCGSNTHGQLGHGDTLDRPT-PKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 297
           T G N+HGQLG G      T P+ +  LE +  + Q+AAG ++  A++ +G V+ +G  +
Sbjct: 160 TWGKNSHGQLGLGKEFPSQTSPQRVRSLEGI-PLAQVAAGGAHSFALSLSGAVFGWGMNN 218

Query: 298 NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 357
              LG  ++ D   P  ++  R +   VV +S G+EH   L  SG V+T+G G CG LGH
Sbjct: 219 AGQLGLSDEKDRESPCHVKLLRTQ--KVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGH 276

Query: 358 GDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV-DTGSVYGFGWMGFGSLG 408
               D+  P  +  L      Q+   ++ T  LV  +G +Y FG    G LG
Sbjct: 277 DSVNDEVNPRRVLELMGSEVTQIACGRQHTLALVPSSGLIYAFGCGAKGQLG 328



 Score =  105 bits (263), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 91/279 (32%), Positives = 133/279 (47%), Gaps = 13/279 (4%)

Query: 114 MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSAS 171
           + +  G  H+L +S+   +FS G+   G LG    T   V+  R I   +   ++QVS  
Sbjct: 87  IHVACGESHSLALSDRGQLFSWGAGSDGQLGLM-TTEDSVAVPRLIQKLNQQTILQVSCG 145

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
             H   +   GQ FT G NS    G          P+ V +L+G+P  QV AG   +  L
Sbjct: 146 NWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFAL 205

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
           ++ G V   G N  GQLG  D  DR +P  +  L     VV I+ G  +   +T +G V+
Sbjct: 206 SLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLR-TQKVVYISCGEEHTAVLTKSGGVF 264

Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL-DSSGYVYTWGKG 350
           +FG+GS   LGH   +DE+ PR +      G  V +++ G +H +AL  SSG +Y +G G
Sbjct: 265 TFGAGSCGQLGHDSVNDEVNPRRV--LELMGSEVTQIACGRQHTLALVPSSGLIYAFGCG 322

Query: 351 YCGALGHGDEIDKTLPEPLSSLKSHLAV---QVCARKRK 386
             G LG G   +   P P   +K H A    Q+ AR  +
Sbjct: 323 AKGQLGTGHTCNVKCPSP---VKGHWAAHSGQLSARADR 358


>gi|113205375|gb|AAU93591.2| Zinc finger protein, putative [Solanum demissum]
          Length = 1127

 Score =  135 bits (339), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 98/330 (29%), Positives = 155/330 (46%), Gaps = 23/330 (6%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V  +S    HA  V + G+ F+ G+ +    GH      +  P+L++  KG+  + +  G
Sbjct: 310 VQNISCGNRHAMLVTKQGEAFSWGEEAGGRLGH-GAETDVSHPKLIKNFKGMNVELIACG 368

Query: 225 LNFTGFLTIRGHVHTCG--SNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 282
              +  +T  G ++T G  + + G LGH        PK +  L E   V  ++ GP +  
Sbjct: 369 EYHSCAVTSSGDLYTWGDGAKSSGLLGHRSEASHWIPKKVCGLMEGLRVSHVSCGPWHTA 428

Query: 283 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA----- 337
            +T  G +++FG G+   LGHG++   + PR ++TF   G+  ++V+ G  H  A     
Sbjct: 429 LITSAGRLFTFGDGTFGALGHGDRSGCITPREVETF--NGLKTLKVACGVWHTAAVVELM 486

Query: 338 --LDS------SGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFV 389
             LDS      SG ++TWG G  G LGHGD   +  P+ +++L      +V      T  
Sbjct: 487 SGLDSRPSDAPSGTLFTWGDGDKGKLGHGDNKPRLAPQCITALVDKSFSEVACSYAMTVA 546

Query: 390 LVDTGSVYGFGWMGFGSLGFP-DRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDR 448
           L  TG VY  G   +G LG P   G+S   +   ++DS     V +IS G +H  V+T R
Sbjct: 547 LTTTGRVYTMGSNVYGQLGCPLANGMSPICVEDYLVDST----VEEISCGSHHVAVLTSR 602

Query: 449 GRLFGFGDNERAQLGHDTLRGCLEPTEIFI 478
             ++ +G  E  QLGH        PT + I
Sbjct: 603 TEVYTWGKGENGQLGHGDCENKCTPTLVDI 632



 Score = 94.7 bits (234), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 80/267 (29%), Positives = 116/267 (43%), Gaps = 20/267 (7%)

Query: 116 ITTGRYHTLLISNSS---VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           I  G YH+  +++S     +  G+   G+LGH  E +  +            V  VS   
Sbjct: 365 IACGEYHSCAVTSSGDLYTWGDGAKSSGLLGHRSEASHWIPKKVCGLMEGLRVSHVSCGP 424

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL- 231
            H A +  +G++FT GD +    GH D +  I  PR VE   G+   +V  G+  T  + 
Sbjct: 425 WHTALITSAGRLFTFGDGTFGALGHGDRSGCI-TPREVETFNGLKTLKVACGVWHTAAVV 483

Query: 232 ------------TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPS 279
                          G + T G    G+LGHGD   R  P+ I  L +  S  ++A   +
Sbjct: 484 ELMSGLDSRPSDAPSGTLFTWGDGDKGKLGHGDNKPRLAPQCITALVD-KSFSEVACSYA 542

Query: 280 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 339
             +A+T  G VY+ GS     LG     + + P  ++ +      V  +S G  HV  L 
Sbjct: 543 MTVALTTTGRVYTMGSNVYGQLG-CPLANGMSPICVEDYLVDST-VEEISCGSHHVAVLT 600

Query: 340 SSGYVYTWGKGYCGALGHGDEIDKTLP 366
           S   VYTWGKG  G LGHGD  +K  P
Sbjct: 601 SRTEVYTWGKGENGQLGHGDCENKCTP 627



 Score = 82.8 bits (203), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 70/252 (27%), Positives = 115/252 (45%), Gaps = 33/252 (13%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           ++ G +HT LI+++  +F+ G    G LGHG + + C++   +   +    ++V+    H
Sbjct: 420 VSCGPWHTALITSAGRLFTFGDGTFGALGHG-DRSGCITPREVETFNGLKTLKVACGVWH 478

Query: 175 AAFVLQ-------------SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQV 221
            A V++             SG +FT GD      GH D N+P   P+ + AL      +V
Sbjct: 479 TAAVVELMSGLDSRPSDAPSGTLFTWGDGDKGKLGHGD-NKPRLAPQCITALVDKSFSEV 537

Query: 222 TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEV---GSVVQIAA 276
                 T  LT  G V+T GSN +GQLG       P    ++P+  E+     +V +I+ 
Sbjct: 538 ACSYAMTVALTTTGRVYTMGSNVYGQLGC------PLANGMSPICVEDYLVDSTVEEISC 591

Query: 277 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVV 336
           G  ++  +T    VY++G G N  LGHG+  ++  P  +   R K   V R+  G     
Sbjct: 592 GSHHVAVLTSRTEVYTWGKGENGQLGHGDCENKCTPTLVDILRDK--QVKRIVCGSNFSA 649

Query: 337 ALDSSGYVYTWG 348
           A+     V+ W 
Sbjct: 650 AI----CVHNWA 657


>gi|297673957|ref|XP_002815007.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 isoform 2
           [Pongo abelii]
          Length = 1050

 Score =  135 bits (339), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 97/301 (32%), Positives = 147/301 (48%), Gaps = 29/301 (9%)

Query: 193 FCCGHRDTNRP---------IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 243
            C G+    +P         +  P++   +     K+V  G N + FL   G V+TCG N
Sbjct: 2   LCWGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLN 61

Query: 244 THGQLGHGDTLDRPTPKSIAPLEEVGS-----VVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
           T GQLGH    ++P        E++G+     ++ +A G S+ LA++  G ++S+G+GS+
Sbjct: 62  TKGQLGHEREGNKP--------EQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSD 113

Query: 299 FCLGHGEQHDELQ-PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 357
             LG     D +  PR IQ   ++ I  ++VS G+ H +AL S G  +TWGK   G LG 
Sbjct: 114 GQLGLMTTEDSVAVPRLIQKLNQQTI--LQVSCGNWHCLALASDGQFFTWGKNSHGQLGL 171

Query: 358 GDEI-DKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSD 416
           G E   +  P+ + SL+     QV A    +F L  +G+V+G+G    G LG  D    +
Sbjct: 172 GKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRE 231

Query: 417 KVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 476
               P  +  LR   V  IS G  HT V+T  G +F FG     QLGHD++   + P  +
Sbjct: 232 S---PCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSYGQLGHDSMNDEVNPRRV 288

Query: 477 F 477
            
Sbjct: 289 L 289



 Score =  128 bits (322), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 98/309 (31%), Positives = 160/309 (51%), Gaps = 14/309 (4%)

Query: 159 FPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVP 217
           F S   V +V+   NH+ F+L+ G+V+TCG N+    GH R+ N+P      + AL    
Sbjct: 30  FISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGNKP----EQIGALADQH 85

Query: 218 CKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDR-PTPKSIAPLEEVGSVVQIAA 276
              V  G + +  L+ RG + + G+ + GQLG   T D    P+ I  L +  +++Q++ 
Sbjct: 86  IIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQ-QTILQVSC 144

Query: 277 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH-DELQPRAIQTFRRKGIHVVRVSAGDEHV 335
           G  + LA+  +G  +++G  S+  LG G++   +  P+ +++   +GI + +V+AG  H 
Sbjct: 145 GNWHCLALASDGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSL--EGIPLAQVAAGGAHS 202

Query: 336 VALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGS 395
            AL  SG V+ WG    G LG  DE D+  P  +  L++   V +   +  T VL  +G 
Sbjct: 203 FALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGG 262

Query: 396 VYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV-VTDRGRLFGF 454
           V+ FG   +G LG     ++D+V  PR +  L    V+QI+ G  HT+  V   G ++ F
Sbjct: 263 VFTFGAGSYGQLG--HDSMNDEV-NPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAF 319

Query: 455 GDNERAQLG 463
           G   R QLG
Sbjct: 320 GCGARGQLG 328



 Score =  119 bits (298), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 93/320 (29%), Positives = 149/320 (46%), Gaps = 11/320 (3%)

Query: 119 GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
           G +   L+ +  V++CG +  G LGH  E  +     +I   +  H++ V+  E+H+  +
Sbjct: 43  GNHSVFLLEDGEVYTCGLNTKGQLGHEREGNKP---EQIGALADQHIIHVACGESHSLAL 99

Query: 179 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVH 238
              GQ+F+ G  S    G   T   +  PRL++ L      QV+ G      L   G   
Sbjct: 100 SDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALASDGQFF 159

Query: 239 TCGSNTHGQLGHGDTL-DRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 297
           T G N+HGQLG G     + +P+ +  LE +  + Q+AAG ++  A++ +G V+ +G  +
Sbjct: 160 TWGKNSHGQLGLGKEFPSQASPQRVRSLEGI-PLAQVAAGGAHSFALSLSGAVFGWGMNN 218

Query: 298 NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 357
              LG  ++ D   P  ++  R +   VV +S G+EH   L  SG V+T+G G  G LGH
Sbjct: 219 AGQLGLSDEKDRESPCHVKLLRTQ--KVVYISCGEEHTAVLTKSGGVFTFGAGSYGQLGH 276

Query: 358 GDEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSD 416
               D+  P  +  L      Q+ C R+     +  +G +Y FG    G LG    G + 
Sbjct: 277 DSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLG---TGHTC 333

Query: 417 KVLRPRILDSLRAHHVSQIS 436
            V  P  +    A H  Q+S
Sbjct: 334 NVKCPSPVKGYWAAHSGQLS 353



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 91/295 (30%), Positives = 136/295 (46%), Gaps = 22/295 (7%)

Query: 114 MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSAS 171
           + +  G  H+L +S+   +FS G+   G LG    T   V+  R I   +   ++QVS  
Sbjct: 87  IHVACGESHSLALSDRGQLFSWGAGSDGQLGLM-TTEDSVAVPRLIQKLNQQTILQVSCG 145

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
             H   +   GQ FT G NS    G          P+ V +L+G+P  QV AG   +  L
Sbjct: 146 NWHCLALASDGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFAL 205

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
           ++ G V   G N  GQLG  D  DR +P  +  L     VV I+ G  +   +T +G V+
Sbjct: 206 SLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLR-TQKVVYISCGEEHTAVLTKSGGVF 264

Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA-LDSSGYVYTWGKG 350
           +FG+GS   LGH   +DE+ PR +      G  V +++ G +H +A + SSG +Y +G G
Sbjct: 265 TFGAGSYGQLGHDSMNDEVNPRRV--LELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCG 322

Query: 351 YCGALGHGDEIDKTLPEPLS---------------SLKSHLAVQVCARKRKTFVL 390
             G LG G   +   P P+                  K H+  Q+ +   +TFVL
Sbjct: 323 ARGQLGTGHTCNVKCPSPVKGYWAAHSGQLSARADRFKYHIVKQIFSGGDQTFVL 377


>gi|188035869|ref|NP_082981.3| hect domain and RLD 3 [Mus musculus]
 gi|148666330|gb|EDK98746.1| hect domain and RLD 3, isoform CRA_b [Mus musculus]
 gi|148666331|gb|EDK98747.1| hect domain and RLD 3, isoform CRA_b [Mus musculus]
 gi|148666332|gb|EDK98748.1| hect domain and RLD 3, isoform CRA_b [Mus musculus]
 gi|148877724|gb|AAI45981.1| Hect domain and RLD 3 [Mus musculus]
 gi|148877951|gb|AAI45979.1| Hect domain and RLD 3 [Mus musculus]
          Length = 1050

 Score =  135 bits (339), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 97/301 (32%), Positives = 148/301 (49%), Gaps = 29/301 (9%)

Query: 193 FCCGHRDTNRP---------IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 243
            C G+    +P         +  P++   +     K+V  G N + FL   G V+TCG N
Sbjct: 2   LCWGYWSLGQPGISSNLQGIVAEPQVCRFVSDRSIKEVACGGNHSVFLLEDGEVYTCGVN 61

Query: 244 THGQLGHGDTLDRPTPKSIAPLEEVGS-----VVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
           T GQLGH    ++P        E++G+     ++ +A G S+ LA++  G ++S+G+GS+
Sbjct: 62  TKGQLGHEREGNKP--------EQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSD 113

Query: 299 FCLGHGEQHDELQ-PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 357
             LG     D +  PR IQ   ++ I  ++VS G+ H +AL + G  +TWGK   G LG 
Sbjct: 114 GQLGLMTTEDSVAVPRLIQKLNQQTI--LQVSCGNWHCLALAADGQFFTWGKNSHGQLGL 171

Query: 358 GDEI-DKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSD 416
           G E   +T P+ + SL+     QV A    +F L  +G+V+G+G    G LG  D    +
Sbjct: 172 GKEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRE 231

Query: 417 KVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 476
               P  +  LR   V  IS G  HT V+T  G +F FG     QLGHD++   + P  +
Sbjct: 232 S---PCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSVNDEVNPRRV 288

Query: 477 F 477
            
Sbjct: 289 L 289



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 97/309 (31%), Positives = 160/309 (51%), Gaps = 14/309 (4%)

Query: 159 FPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVP 217
           F S   + +V+   NH+ F+L+ G+V+TCG N+    GH R+ N    +P  + AL    
Sbjct: 30  FVSDRSIKEVACGGNHSVFLLEDGEVYTCGVNTKGQLGHEREGN----KPEQIGALADQH 85

Query: 218 CKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDR-PTPKSIAPLEEVGSVVQIAA 276
              V  G + +  L+ RG + + G+ + GQLG   T D    P+ I  L +  +++Q++ 
Sbjct: 86  IIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQ-QTILQVSC 144

Query: 277 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH-DELQPRAIQTFRRKGIHVVRVSAGDEHV 335
           G  + LA+  +G  +++G  S+  LG G++   +  P+ +++   +GI + +V+AG  H 
Sbjct: 145 GNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQTSPQRVRSL--EGIPLAQVAAGGAHS 202

Query: 336 VALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGS 395
            AL  SG V+ WG    G LG  DE D+  P  +  L++   V +   +  T VL  +G 
Sbjct: 203 FALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGG 262

Query: 396 VYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV-VVTDRGRLFGF 454
           V+ FG    G LG     V+D+V  PR +  L    V+QI+ G  HT+ +V   G ++ F
Sbjct: 263 VFTFGAGSCGQLG--HDSVNDEV-NPRRVLELMGSEVTQIACGRQHTLALVPSSGLIYAF 319

Query: 455 GDNERAQLG 463
           G   + QLG
Sbjct: 320 GCGAKGQLG 328



 Score =  125 bits (315), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 97/320 (30%), Positives = 151/320 (47%), Gaps = 11/320 (3%)

Query: 119 GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
           G +   L+ +  V++CG +  G LGH  E  +     +I   +  H++ V+  E+H+  +
Sbjct: 43  GNHSVFLLEDGEVYTCGVNTKGQLGHEREGNKP---EQIGALADQHIIHVACGESHSLAL 99

Query: 179 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVH 238
              GQ+F+ G  S    G   T   +  PRL++ L      QV+ G      L   G   
Sbjct: 100 SDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFF 159

Query: 239 TCGSNTHGQLGHGDTLDRPT-PKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 297
           T G N+HGQLG G      T P+ +  LE +  + Q+AAG ++  A++ +G V+ +G  +
Sbjct: 160 TWGKNSHGQLGLGKEFPSQTSPQRVRSLEGI-PLAQVAAGGAHSFALSLSGAVFGWGMNN 218

Query: 298 NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 357
              LG  ++ D   P  ++  R +   VV +S G+EH   L  SG V+T+G G CG LGH
Sbjct: 219 AGQLGLSDEKDRESPCHVKLLRTQ--KVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGH 276

Query: 358 GDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV-DTGSVYGFGWMGFGSLGFPDRGVSD 416
               D+  P  +  L      Q+   ++ T  LV  +G +Y FG    G LG    G + 
Sbjct: 277 DSVNDEVNPRRVLELMGSEVTQIACGRQHTLALVPSSGLIYAFGCGAKGQLG---TGHTC 333

Query: 417 KVLRPRILDSLRAHHVSQIS 436
            V  P  +    A H SQ+S
Sbjct: 334 NVKCPSPVKGHWAAHSSQLS 353



 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 88/276 (31%), Positives = 132/276 (47%), Gaps = 7/276 (2%)

Query: 114 MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSAS 171
           + +  G  H+L +S+   +FS G+   G LG    T   V+  R I   +   ++QVS  
Sbjct: 87  IHVACGESHSLALSDRGQLFSWGAGSDGQLGLM-TTEDSVAVPRLIQKLNQQTILQVSCG 145

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
             H   +   GQ FT G NS    G          P+ V +L+G+P  QV AG   +  L
Sbjct: 146 NWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFAL 205

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
           ++ G V   G N  GQLG  D  DR +P  +  L     VV I+ G  +   +T +G V+
Sbjct: 206 SLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLR-TQKVVYISCGEEHTAVLTKSGGVF 264

Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL-DSSGYVYTWGKG 350
           +FG+GS   LGH   +DE+ PR +      G  V +++ G +H +AL  SSG +Y +G G
Sbjct: 265 TFGAGSCGQLGHDSVNDEVNPRRV--LELMGSEVTQIACGRQHTLALVPSSGLIYAFGCG 322

Query: 351 YCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRK 386
             G LG G   +   P P+    +  + Q+ AR  +
Sbjct: 323 AKGQLGTGHTCNVKCPSPVKGHWAAHSSQLSARADR 358


>gi|27503689|gb|AAH42574.1| Hect domain and RLD 3 [Mus musculus]
          Length = 1050

 Score =  135 bits (339), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 97/301 (32%), Positives = 148/301 (49%), Gaps = 29/301 (9%)

Query: 193 FCCGHRDTNRP---------IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 243
            C G+    +P         +  P++   +     K+V  G N + FL   G V+TCG N
Sbjct: 2   LCWGYWSLGQPGISSNLQGIVAEPQVCRFVSDRSIKEVACGGNHSVFLLEDGEVYTCGVN 61

Query: 244 THGQLGHGDTLDRPTPKSIAPLEEVGS-----VVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
           T GQLGH    ++P        E++G+     ++ +A G S+ LA++  G ++S+G+GS+
Sbjct: 62  TKGQLGHEREGNKP--------EQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSD 113

Query: 299 FCLGHGEQHDELQ-PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 357
             LG     D +  PR IQ   ++ I  ++VS G+ H +AL + G  +TWGK   G LG 
Sbjct: 114 GQLGLMTTEDSVAVPRLIQKLNQQTI--LQVSCGNWHCLALAADGQFFTWGKNSHGQLGL 171

Query: 358 GDEI-DKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSD 416
           G E   +T P+ + SL+     QV A    +F L  +G+V+G+G    G LG  D    +
Sbjct: 172 GKEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRE 231

Query: 417 KVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 476
               P  +  LR   V  IS G  HT V+T  G +F FG     QLGHD++   + P  +
Sbjct: 232 S---PCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSVNDEVNPRRV 288

Query: 477 F 477
            
Sbjct: 289 L 289



 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 97/309 (31%), Positives = 160/309 (51%), Gaps = 14/309 (4%)

Query: 159 FPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVP 217
           F S   + +V+   NH+ F+L+ G+V+TCG N+    GH R+ N    +P  + AL    
Sbjct: 30  FVSDRSIKEVACGGNHSVFLLEDGEVYTCGVNTKGQLGHEREGN----KPEQIGALADQH 85

Query: 218 CKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDR-PTPKSIAPLEEVGSVVQIAA 276
              V  G + +  L+ RG + + G+ + GQLG   T D    P+ I  L +  +++Q++ 
Sbjct: 86  IIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQ-QTILQVSC 144

Query: 277 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH-DELQPRAIQTFRRKGIHVVRVSAGDEHV 335
           G  + LA+  +G  +++G  S+  LG G++   +  P+ +++   +GI + +V+AG  H 
Sbjct: 145 GNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQTSPQRVRSL--EGIPLAQVAAGGAHS 202

Query: 336 VALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGS 395
            AL  SG V+ WG    G LG  DE D+  P  +  L++   V +   +  T VL  +G 
Sbjct: 203 FALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGG 262

Query: 396 VYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV-VVTDRGRLFGF 454
           V+ FG    G LG     V+D+V  PR +  L    V+QI+ G  HT+ +V   G ++ F
Sbjct: 263 VFTFGAGSCGQLG--HDSVNDEV-NPRRVLELMGSEVTQIACGRQHTLALVPSSGLIYAF 319

Query: 455 GDNERAQLG 463
           G   + QLG
Sbjct: 320 GCGAKGQLG 328



 Score =  125 bits (315), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 97/320 (30%), Positives = 151/320 (47%), Gaps = 11/320 (3%)

Query: 119 GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
           G +   L+ +  V++CG +  G LGH  E  +     +I   +  H++ V+  E+H+  +
Sbjct: 43  GNHSVFLLEDGEVYTCGVNTKGQLGHEREGNKP---EQIGALADQHIIHVACGESHSLAL 99

Query: 179 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVH 238
              GQ+F+ G  S    G   T   +  PRL++ L      QV+ G      L   G   
Sbjct: 100 SDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFF 159

Query: 239 TCGSNTHGQLGHGDTLDRPT-PKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 297
           T G N+HGQLG G      T P+ +  LE +  + Q+AAG ++  A++ +G V+ +G  +
Sbjct: 160 TWGKNSHGQLGLGKEFPSQTSPQRVRSLEGI-PLAQVAAGGAHSFALSLSGAVFGWGMNN 218

Query: 298 NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 357
              LG  ++ D   P  ++  R +   VV +S G+EH   L  SG V+T+G G CG LGH
Sbjct: 219 AGQLGLSDEKDRESPCHVKLLRTQ--KVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGH 276

Query: 358 GDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV-DTGSVYGFGWMGFGSLGFPDRGVSD 416
               D+  P  +  L      Q+   ++ T  LV  +G +Y FG    G LG    G + 
Sbjct: 277 DSVNDEVNPRRVLELMGSEVTQIACGRQHTLALVPSSGLIYAFGCGAKGQLG---TGHTC 333

Query: 417 KVLRPRILDSLRAHHVSQIS 436
            V  P  +    A H SQ+S
Sbjct: 334 NVKCPSPVKGHWAAHSSQLS 353



 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 88/276 (31%), Positives = 132/276 (47%), Gaps = 7/276 (2%)

Query: 114 MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSAS 171
           + +  G  H+L +S+   +FS G+   G LG    T   V+  R I   +   ++QVS  
Sbjct: 87  IHVACGESHSLALSDRGQLFSWGAGSDGQLGLM-TTEDSVAVPRLIQKLNQQTILQVSCG 145

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
             H   +   GQ FT G NS    G          P+ V +L+G+P  QV AG   +  L
Sbjct: 146 NWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFAL 205

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
           ++ G V   G N  GQLG  D  DR +P  +  L     VV I+ G  +   +T +G V+
Sbjct: 206 SLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLR-TQKVVYISCGEEHTAVLTKSGGVF 264

Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL-DSSGYVYTWGKG 350
           +FG+GS   LGH   +DE+ PR +      G  V +++ G +H +AL  SSG +Y +G G
Sbjct: 265 TFGAGSCGQLGHDSVNDEVNPRRV--LELMGSEVTQIACGRQHTLALVPSSGLIYAFGCG 322

Query: 351 YCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRK 386
             G LG G   +   P P+    +  + Q+ AR  +
Sbjct: 323 AKGQLGTGHTCNVKCPSPVKGHWAAHSSQLSARADR 358


>gi|195336543|ref|XP_002034895.1| GM14399 [Drosophila sechellia]
 gi|194127988|gb|EDW50031.1| GM14399 [Drosophila sechellia]
          Length = 1058

 Score =  135 bits (339), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 107/360 (29%), Positives = 168/360 (46%), Gaps = 25/360 (6%)

Query: 125 LISNSSVFSCGSSLCGVLGHG-PETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQ 183
           + S   ++  GS+  G LG G  E  Q ++  +I +     V QV+    H  F+  +G+
Sbjct: 1   MASGKELYCWGSTSHGQLGLGGIEDEQILTPRQIPWTPDTAVQQVACGHRHTLFLTATGK 60

Query: 184 VFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 243
           V+ CG N     GH   + P  RP+L+  L+     Q++ G   +  L+  G V + G N
Sbjct: 61  VYACGSNDYSQLGH---DLPTKRPQLIPELQDYVIIQISCGSRHSLALSDWGQVLSWGDN 117

Query: 244 THGQLGHGDTLDRPTPKSIAPLEEV------GSVVQIAAGPSYMLAVTGNGVVYSFGSGS 297
             GQLGH       T K I  L +V       +VVQIA G ++ LA+T  G +YS+GS  
Sbjct: 118 DCGQLGHA------TEKEIVQLPKVVRQLVSKTVVQIACGNNHSLALTSCGELYSWGSNI 171

Query: 298 NFCLGHGEQHDELQ---PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGA 354
              LG    +D      P  + T    GI +  ++ G  H   +  SG V+ WG+  CG 
Sbjct: 172 YGQLGVNSPNDLTHCNYPLRLTTLL--GIPLAAIACGGNHSFLISKSGAVFGWGRNNCGQ 229

Query: 355 LGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGV 414
           LG  DE ++  P  L +L++     V      +  L + G V+  G   +G LG    G 
Sbjct: 230 LGLNDETNRAYPTQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGAYGQLG---HGF 286

Query: 415 SDKVLRPRILDSLRAHHVSQISTGLYHTV-VVTDRGRLFGFGDNERAQLGHDTLRGCLEP 473
           S   + PR++  L    ++Q++ G  HT+ +V  RG+++ FG     QLG  + +  + P
Sbjct: 287 SSNEMLPRMVMELMGSTITQVACGNRHTLALVPSRGKVYAFGLGSSGQLGTRSTKSLMLP 346



 Score =  109 bits (272), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 92/301 (30%), Positives = 137/301 (45%), Gaps = 15/301 (4%)

Query: 115 QITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
           Q+  G  HTL ++ +  V++CGS+    LGH   T +      +       ++Q+S    
Sbjct: 44  QVACGHRHTLFLTATGKVYACGSNDYSQLGHDLPTKRPQLIPELQ---DYVIIQISCGSR 100

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
           H+  +   GQV + GDN     GH      +  P++V  L      Q+  G N +  LT 
Sbjct: 101 HSLALSDWGQVLSWGDNDCGQLGHATEKEIVQLPKVVRQLVSKTVVQIACGNNHSLALTS 160

Query: 234 RGHVHTCGSNTHGQLGHGDTLDRP---TPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 290
            G +++ GSN +GQLG     D      P  +  L  +  +  IA G ++   ++ +G V
Sbjct: 161 CGELYSWGSNIYGQLGVNSPNDLTHCNYPLRLTTLLGI-PLAAIACGGNHSFLISKSGAV 219

Query: 291 YSFGSGSNFC--LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 348
             FG G N C  LG  ++ +   P  ++T R  G+    V+ GDE  V L + G V+T G
Sbjct: 220 --FGWGRNNCGQLGLNDETNRAYPTQLKTLRTLGVRF--VACGDEFSVFLTNEGGVFTCG 275

Query: 349 KGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDT-GSVYGFGWMGFGSL 407
            G  G LGHG   ++ LP  +  L      QV    R T  LV + G VY FG    G L
Sbjct: 276 AGAYGQLGHGFSSNEMLPRMVMELMGSTITQVACGNRHTLALVPSRGKVYAFGLGSSGQL 335

Query: 408 G 408
           G
Sbjct: 336 G 336



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 77/261 (29%), Positives = 120/261 (45%), Gaps = 13/261 (4%)

Query: 114 MQITTGRYHTLLISN-SSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +QI+ G  H+L +S+   V S G + CG LGH  E         +    +  VVQ++   
Sbjct: 93  IQISCGSRHSLALSDWGQVLSWGDNDCGQLGHATEKEIVQLPKVVRQLVSKTVVQIACGN 152

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRP-----IFRPRLVEALKGVPCKQVTAGLNF 227
           NH+  +   G++++ G N     G    N P        P  +  L G+P   +  G N 
Sbjct: 153 NHSLALTSCGELYSWGSN---IYGQLGVNSPNDLTHCNYPLRLTTLLGIPLAAIACGGNH 209

Query: 228 TGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN 287
           +  ++  G V   G N  GQLG  D  +R  P  +  L  +G V  +A G  + + +T  
Sbjct: 210 SFLISKSGAVFGWGRNNCGQLGLNDETNRAYPTQLKTLRTLG-VRFVACGDEFSVFLTNE 268

Query: 288 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL-DSSGYVYT 346
           G V++ G+G+   LGHG   +E+ PR +      G  + +V+ G+ H +AL  S G VY 
Sbjct: 269 GGVFTCGAGAYGQLGHGFSSNEMLPRMVMELM--GSTITQVACGNRHTLALVPSRGKVYA 326

Query: 347 WGKGYCGALGHGDEIDKTLPE 367
           +G G  G LG        LP+
Sbjct: 327 FGLGSSGQLGTRSTKSLMLPQ 347



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 74/244 (30%), Positives = 112/244 (45%), Gaps = 8/244 (3%)

Query: 236 HVHTCGSNTHGQLGHGDTLDRP--TPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
            ++  GS +HGQLG G   D    TP+ I P     +V Q+A G  + L +T  G VY+ 
Sbjct: 6   ELYCWGSTSHGQLGLGGIEDEQILTPRQI-PWTPDTAVQQVACGHRHTLFLTATGKVYAC 64

Query: 294 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 353
           GS     LGH       +P+ I   +   I  +++S G  H +AL   G V +WG   CG
Sbjct: 65  GSNDYSQLGHDLPTK--RPQLIPELQDYVI--IQISCGSRHSLALSDWGQVLSWGDNDCG 120

Query: 354 ALGHGDEIDKT-LPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDR 412
            LGH  E +   LP+ +  L S   VQ+      +  L   G +Y +G   +G LG    
Sbjct: 121 QLGHATEKEIVQLPKVVRQLVSKTVVQIACGNNHSLALTSCGELYSWGSNIYGQLGVNSP 180

Query: 413 GVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLE 472
                   P  L +L    ++ I+ G  H+ +++  G +FG+G N   QLG +       
Sbjct: 181 NDLTHCNYPLRLTTLLGIPLAAIACGGNHSFLISKSGAVFGWGRNNCGQLGLNDETNRAY 240

Query: 473 PTEI 476
           PT++
Sbjct: 241 PTQL 244



 Score = 82.0 bits (201), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 69/208 (33%), Positives = 107/208 (51%), Gaps = 10/208 (4%)

Query: 114 MQITTGRYHTL-LISNSSVFSCGSSLCGVLG-HGP-ETTQCVSFTRINFPSAAHVVQVSA 170
           +QI  G  H+L L S   ++S GS++ G LG + P + T C    R+       +  ++ 
Sbjct: 146 VQIACGNNHSLALTSCGELYSWGSNIYGQLGVNSPNDLTHCNYPLRLTTLLGIPLAAIAC 205

Query: 171 SENHAAFVLQSGQVFTCGDNSSFCCGHRD-TNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
             NH+  + +SG VF  G N+    G  D TNR    P  ++ L+ +  + V  G  F+ 
Sbjct: 206 GGNHSFLISKSGAVFGWGRNNCGQLGLNDETNRAY--PTQLKTLRTLGVRFVACGDEFSV 263

Query: 230 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGN 287
           FLT  G V TCG+  +GQLGHG + +   P+ +  +E +GS + Q+A G  + LA V   
Sbjct: 264 FLTNEGGVFTCGAGAYGQLGHGFSSNEMLPRMV--MELMGSTITQVACGNRHTLALVPSR 321

Query: 288 GVVYSFGSGSNFCLGHGEQHDELQPRAI 315
           G VY+FG GS+  LG       + P+ +
Sbjct: 322 GKVYAFGLGSSGQLGTRSTKSLMLPQVV 349


>gi|291401438|ref|XP_002717008.1| PREDICTED: hect domain and RLD 3 [Oryctolagus cuniculus]
          Length = 1504

 Score =  135 bits (339), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 97/277 (35%), Positives = 142/277 (51%), Gaps = 20/277 (7%)

Query: 219 KQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS-----VVQ 273
           K+V  G N + FL   G V+TCG NT GQLGH    ++P        E++G+     +V 
Sbjct: 491 KEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGNKP--------EQIGALADQHIVH 542

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQ-PRAIQTFRRKGIHVVRVSAGD 332
           +A G S+ LA++  G ++S+G+GS+  LG     D +  PR IQ   ++ I  ++VS G+
Sbjct: 543 VACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTI--LQVSCGN 600

Query: 333 EHVVALDSSGYVYTWGKGYCGALGHGDEI-DKTLPEPLSSLKSHLAVQVCARKRKTFVLV 391
            H +AL + G  +TWGK   G LG G E   +T P+ + SL+     QV A    +F L 
Sbjct: 601 WHCLALAADGQFFTWGKNSHGQLGLGKEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFALS 660

Query: 392 DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRL 451
            +G+V+G+G    G LG  D    +    P  +  LR   V  IS G  HT V+T  G +
Sbjct: 661 LSGAVFGWGMNNAGQLGLSDEKDRES---PCHVKLLRTQKVVYISCGEEHTAVLTKSGGV 717

Query: 452 FGFGDNERAQLGHDTLRGCLEPTEIFIQEMEEDTGLA 488
           F FG     QLGHD++   + P  +      E T +A
Sbjct: 718 FTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIA 754



 Score =  125 bits (314), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 96/303 (31%), Positives = 157/303 (51%), Gaps = 14/303 (4%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVPCKQVTA 223
           V +V+   NH+ F+L+ G+V+TCG N+    GH R+ N    +P  + AL       V  
Sbjct: 490 VKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGN----KPEQIGALADQHIVHVAC 545

Query: 224 GLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDR-PTPKSIAPLEEVGSVVQIAAGPSYML 282
           G + +  L+ RG + + G+ + GQLG   T D    P+ I  L +  +++Q++ G  + L
Sbjct: 546 GESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQ-QTILQVSCGNWHCL 604

Query: 283 AVTGNGVVYSFGSGSNFCLGHGEQH-DELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 341
           A+  +G  +++G  S+  LG G++   +  P+ +++   +GI + +V+AG  H  AL  S
Sbjct: 605 ALAADGQFFTWGKNSHGQLGLGKEFPSQTSPQRVRSL--EGIPLAQVAAGGAHSFALSLS 662

Query: 342 GYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGW 401
           G V+ WG    G LG  DE D+  P  +  L++   V +   +  T VL  +G V+ FG 
Sbjct: 663 GAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGA 722

Query: 402 MGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV-VTDRGRLFGFGDNERA 460
              G LG     ++D+V  PR +  L    V+QI+ G  HT+  V   G ++ FG   R 
Sbjct: 723 GSCGQLG--HDSMNDEV-NPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARG 779

Query: 461 QLG 463
           QLG
Sbjct: 780 QLG 782



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 96/321 (29%), Positives = 149/321 (46%), Gaps = 11/321 (3%)

Query: 119 GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
           G +   L+ +  V++CG +  G LGH  E  +     +I   +  H+V V+  E+H+  +
Sbjct: 497 GNHSVFLLEDGEVYTCGLNTKGQLGHEREGNKP---EQIGALADQHIVHVACGESHSLAL 553

Query: 179 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVH 238
              GQ+F+ G  S    G   T   +  PRL++ L      QV+ G      L   G   
Sbjct: 554 SDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFF 613

Query: 239 TCGSNTHGQLGHGDTLDRPT-PKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 297
           T G N+HGQLG G      T P+ +  LE +  + Q+AAG ++  A++ +G V+ +G  +
Sbjct: 614 TWGKNSHGQLGLGKEFPSQTSPQRVRSLEGI-PLAQVAAGGAHSFALSLSGAVFGWGMNN 672

Query: 298 NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 357
              LG  ++ D   P  ++  R +   VV +S G+EH   L  SG V+T+G G CG LGH
Sbjct: 673 AGQLGLSDEKDRESPCHVKLLRTQ--KVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGH 730

Query: 358 GDEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSD 416
               D+  P  +  L      Q+ C R+     +  +G +Y FG    G LG    G + 
Sbjct: 731 DSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLG---TGHTC 787

Query: 417 KVLRPRILDSLRAHHVSQIST 437
            V  P  +    A H  Q+S 
Sbjct: 788 NVKCPSPVKGYWAAHSGQLSA 808



 Score =  105 bits (263), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 87/273 (31%), Positives = 131/273 (47%), Gaps = 7/273 (2%)

Query: 114 MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSAS 171
           + +  G  H+L +S+   +FS G+   G LG    T   V+  R I   +   ++QVS  
Sbjct: 541 VHVACGESHSLALSDRGQLFSWGAGSDGQLGLM-TTEDSVAVPRLIQKLNQQTILQVSCG 599

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
             H   +   GQ FT G NS    G          P+ V +L+G+P  QV AG   +  L
Sbjct: 600 NWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFAL 659

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
           ++ G V   G N  GQLG  D  DR +P  +  L     VV I+ G  +   +T +G V+
Sbjct: 660 SLSGAVFGWGMNNAGQLGLSDEKDRESPCHVK-LLRTQKVVYISCGEEHTAVLTKSGGVF 718

Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA-LDSSGYVYTWGKG 350
           +FG+GS   LGH   +DE+ PR +      G  V +++ G +H +A + SSG +Y +G G
Sbjct: 719 TFGAGSCGQLGHDSMNDEVNPRRV--LELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCG 776

Query: 351 YCGALGHGDEIDKTLPEPLSSLKSHLAVQVCAR 383
             G LG G   +   P P+    +  + Q+ AR
Sbjct: 777 ARGQLGTGHTCNVKCPSPVKGYWAAHSGQLSAR 809


>gi|356534059|ref|XP_003535575.1| PREDICTED: uncharacterized protein LOC100783270 [Glycine max]
          Length = 1120

 Score =  135 bits (339), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 99/324 (30%), Positives = 154/324 (47%), Gaps = 21/324 (6%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V+Q++    HAA V + G++FT G+ S    GH    + + +PRLVEA+       V  G
Sbjct: 281 VLQIACGVKHAALVTRQGELFTWGEESGGRLGH-GVGKNVIQPRLVEAMASTTVDFVACG 339

Query: 225 LNFTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSYM 281
              T  +T+ G ++T G  TH  G LGHG  +    PK IA PLE +  V  +  GP + 
Sbjct: 340 EFHTCAVTMAGELYTWGDGTHNAGLLGHGTDVSHWIPKRIAGPLEGL-QVALVTCGPWHT 398

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL--- 338
             +T  G +++FG G+   LGHG++ +   PR +++    G+  + V+ G  H  A+   
Sbjct: 399 ALITSTGQLFTFGDGTFGVLGHGDRENVSYPREVESL--SGLRTIAVACGVWHTAAVVEV 456

Query: 339 --------DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVL 390
                    SS  ++TWG G    LGHGD+  +  P  +S L      ++      T  L
Sbjct: 457 IVTQSSASVSSDKLFTWGDGDKNRLGHGDKDARLEPTCVSLLIDSNFHRIACGHSLTVGL 516

Query: 391 VDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGR 450
             +G V+  G   +G LG P    SD  +   + D L    V +I+ G YH  V+T +  
Sbjct: 517 TTSGEVFTMGSSVYGQLGNPQ---SDGKVPCLVKDKLAGESVEEIACGAYHVAVLTSKNE 573

Query: 451 LFGFGDNERAQLGHDTLRGCLEPT 474
           ++ +G     +LGH  +     PT
Sbjct: 574 VYTWGKGANGRLGHGDVEDRKTPT 597



 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 84/282 (29%), Positives = 127/282 (45%), Gaps = 21/282 (7%)

Query: 116 ITTGRYHTLLISNSS---VFSCGSSLCGVLGHGPETTQCVSFTRINFP-SAAHVVQVSAS 171
           +  G +HT  ++ +     +  G+   G+LGHG + +  +   RI  P     V  V+  
Sbjct: 336 VACGEFHTCAVTMAGELYTWGDGTHNAGLLGHGTDVSHWIP-KRIAGPLEGLQVALVTCG 394

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
             H A +  +GQ+FT GD +    GH D    +  PR VE+L G+    V  G+  T  +
Sbjct: 395 PWHTALITSTGQLFTFGDGTFGVLGHGDREN-VSYPREVESLSGLRTIAVACGVWHTAAV 453

Query: 232 T-----------IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 280
                           + T G     +LGHGD   R  P  ++ L +  +  +IA G S 
Sbjct: 454 VEVIVTQSSASVSSDKLFTWGDGDKNRLGHGDKDARLEPTCVSLLID-SNFHRIACGHSL 512

Query: 281 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 340
            + +T +G V++ GS     LG+  Q D   P  ++  +  G  V  ++ G  HV  L S
Sbjct: 513 TVGLTTSGEVFTMGSSVYGQLGN-PQSDGKVPCLVKD-KLAGESVEEIACGAYHVAVLTS 570

Query: 341 SGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKS-HLAVQVC 381
              VYTWGKG  G LGHGD  D+  P  + +LK  H+    C
Sbjct: 571 KNEVYTWGKGANGRLGHGDVEDRKTPTLVEALKDRHVKYIAC 612



 Score = 83.2 bits (204), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 81/294 (27%), Positives = 131/294 (44%), Gaps = 17/294 (5%)

Query: 204 IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 263
           I  PR +E+   +   Q+  G+     +T +G + T G  + G+LGHG   +   P+ + 
Sbjct: 267 ILLPRPLESNVVLDVLQIACGVKHAALVTRQGELFTWGEESGGRLGHGVGKNVIQPRLVE 326

Query: 264 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC--LGHGEQHDELQPRAIQTFRRK 321
            +    +V  +A G  +  AVT  G +Y++G G++    LGHG       P+ I     +
Sbjct: 327 AMAST-TVDFVACGEFHTCAVTMAGELYTWGDGTHNAGLLGHGTDVSHWIPKRI-AGPLE 384

Query: 322 GIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVC 381
           G+ V  V+ G  H   + S+G ++T+G G  G LGHGD  + + P  + SL     + V 
Sbjct: 385 GLQVALVTCGPWHTALITSTGQLFTFGDGTFGVLGHGDRENVSYPREVESLSGLRTIAVA 444

Query: 382 ARKRKTFVLVD------TGSVYG---FGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHV 432
                T  +V+      + SV     F W G G       G  D  L P  +  L   + 
Sbjct: 445 CGVWHTAAVVEVIVTQSSASVSSDKLFTW-GDGDKNRLGHGDKDARLEPTCVSLLIDSNF 503

Query: 433 SQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG---CLEPTEIFIQEMEE 483
            +I+ G   TV +T  G +F  G +   QLG+    G   CL   ++  + +EE
Sbjct: 504 HRIACGHSLTVGLTTSGEVFTMGSSVYGQLGNPQSDGKVPCLVKDKLAGESVEE 557



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 72/252 (28%), Positives = 116/252 (46%), Gaps = 19/252 (7%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSASEN 173
           +T G +HT LI+++  +F+ G    GVLGHG    + VS+ R +   S    + V+    
Sbjct: 391 VTCGPWHTALITSTGQLFTFGDGTFGVLGHGDR--ENVSYPREVESLSGLRTIAVACGVW 448

Query: 174 HAAFVLQ-----------SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 222
           H A V++           S ++FT GD      GH D +  +  P  V  L      ++ 
Sbjct: 449 HTAAVVEVIVTQSSASVSSDKLFTWGDGDKNRLGHGDKDARL-EPTCVSLLIDSNFHRIA 507

Query: 223 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 282
            G + T  LT  G V T GS+ +GQLG+  + D   P  +       SV +IA G  ++ 
Sbjct: 508 CGHSLTVGLTTSGEVFTMGSSVYGQLGNPQS-DGKVPCLVKDKLAGESVEEIACGAYHVA 566

Query: 283 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
            +T    VY++G G+N  LGHG+  D   P  ++  + +  HV  ++ G  +  A+    
Sbjct: 567 VLTSKNEVYTWGKGANGRLGHGDVEDRKTPTLVEALKDR--HVKYIACGSNYSAAICLHK 624

Query: 343 YVYTWGKGYCGA 354
           +V    +  C A
Sbjct: 625 WVSGAEQSQCSA 636



 Score = 56.6 bits (135), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 46/170 (27%), Positives = 76/170 (44%), Gaps = 4/170 (2%)

Query: 308 DELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPE 367
           D L PR +++     + V++++ G +H   +   G ++TWG+   G LGHG   +   P 
Sbjct: 266 DILLPRPLES--NVVLDVLQIACGVKHAALVTRQGELFTWGEESGGRLGHGVGKNVIQPR 323

Query: 368 PLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRP-RILDS 426
            + ++ S     V   +  T  +   G +Y +G  G  + G    G       P RI   
Sbjct: 324 LVEAMASTTVDFVACGEFHTCAVTMAGELYTWG-DGTHNAGLLGHGTDVSHWIPKRIAGP 382

Query: 427 LRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 476
           L    V+ ++ G +HT ++T  G+LF FGD     LGH        P E+
Sbjct: 383 LEGLQVALVTCGPWHTALITSTGQLFTFGDGTFGVLGHGDRENVSYPREV 432


>gi|405965978|gb|EKC31310.1| Putative E3 ubiquitin-protein ligase HERC2 [Crassostrea gigas]
          Length = 5345

 Score =  134 bits (338), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 98/354 (27%), Positives = 166/354 (46%), Gaps = 7/354 (1%)

Query: 128  NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTC 187
             ++VF  G +    LG GP+ ++    T  +  SA   VQ+         V Q G+V+ C
Sbjct: 3463 QTNVFCWGLNDKDQLG-GPKGSKIKLPTLNDNLSALRCVQIVGGSKSLFCVTQEGKVYAC 3521

Query: 188  GDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT--AGLNFTGFLTIRGHVHTCGSNTH 245
            G+ ++   G   T   +  PR + +L     K+V   +G   +  LT  G V + G    
Sbjct: 3522 GEATNGRLGLGITTGTVSVPRQITSLSQYVIKKVAVHSGGRHSLALTTDGKVFSWGEGDD 3581

Query: 246  GQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGE 305
            G+LGH    +   P+ I  L+    V  IA G S+  A+T NG +Y++G G    LGHG+
Sbjct: 3582 GKLGHFSRWNCDKPRLIEALKS-KRVRDIACGSSHSAAITSNGDLYTWGLGEYGRLGHGD 3640

Query: 306  QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTL 365
               +L+P+ ++    + +  V   + D   +AL   G VY+WG G  G LG G      +
Sbjct: 3641 NTTQLKPKQVKALAHERVVQVACGSRDAQTLALTDEGKVYSWGDGDFGKLGRGGSEGCNV 3700

Query: 366  PEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILD 425
            P  +  L+     Q+    + +  L  +G V+ +G   +  LG    G    V +P+I++
Sbjct: 3701 PHEVDRLRDQKVCQIECGAQFSLALTKSGQVWTWGKGDYFRLG---HGTDAHVRKPQIVE 3757

Query: 426  SLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQ 479
             L+   +  ++ G  H + VTD G++F +GDN+  Q G+ T     +P  + ++
Sbjct: 3758 GLKGKKIVHVAVGALHCLAVTDSGQVFAWGDNDHGQQGNGTTTVNRKPALVVLE 3811



 Score =  132 bits (332), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 89/265 (33%), Positives = 133/265 (50%), Gaps = 5/265 (1%)

Query: 224 GLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
           G ++ G LT  G V + G+   G+LGHGD  +   P  I  L     V +I  G SY +A
Sbjct: 628 GKHYMG-LTSDGEVFSWGNGDGGKLGHGDYQNHEEPALITGLSG-KQVAKICCGSSYSVA 685

Query: 284 VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 343
           +T NG VYS+G G+   LGHG   D+  P  ++ F+   I  V   +GD   +A+  SG 
Sbjct: 686 LTSNGEVYSWGKGNFGRLGHGSSEDQTTPMLLKFFKGHRIVDVACGSGDAQTLAVTDSGA 745

Query: 344 VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 403
           VY+WG G  G LG G       P+ +  L     V+V    + +  L  +G+VY +G   
Sbjct: 746 VYSWGDGDYGKLGRGGNDGCKTPKVIEKLMGQDVVRVYCGNQFSMALTKSGAVYTWGKGD 805

Query: 404 FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 463
              LG    G  D    P+ +++L +  V  I+ G  H + +T+ G L+G+G NE+ QLG
Sbjct: 806 NYRLG---HGTEDHARHPKQIEALSSKKVKDIAIGSLHCMAITEDGELYGWGRNEQGQLG 862

Query: 464 HDTLRGCLEPTEIFIQEMEEDTGLA 488
           + ++    EPT I   E +   G+A
Sbjct: 863 NPSISNFTEPTLIGGMEGKNIIGVA 887



 Score =  125 bits (313), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 89/310 (28%), Positives = 145/310 (46%), Gaps = 7/310 (2%)

Query: 166  VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQ--VTA 223
            +Q+   E     V   G+VF  G  +    G   T   +  P  +E+++ V  K+  V +
Sbjct: 4497 IQLVGGEQTLFAVTAEGKVFATGYGAGGRLGVGGTES-VSHPTQLESIQHVFIKKLAVNS 4555

Query: 224  GLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
            G      L+  G V++ G    G+LGHG+      P+ I  L     VV IAAG ++   
Sbjct: 4556 GGKHCLALSAEGEVYSWGEGEDGKLGHGNRSPCDRPRVIDSLRG-KEVVDIAAGGAHSAC 4614

Query: 284  VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 343
            +T NG +Y++G G    LGHG+  D+ +P+ ++  +   +  +   +GD   + +     
Sbjct: 4615 ITANGELYTWGKGRYGRLGHGDSEDQPRPKLVEALKSYRVVDMACGSGDAQTLCITDDDN 4674

Query: 344  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 403
            V++WG G  G LG G      +P  + +L+    ++V    + +  L  +GSVY +G   
Sbjct: 4675 VWSWGDGDYGKLGRGGSDGCKVPMKIETLQGQGVMKVECGSQFSVALTKSGSVYTWGKGD 4734

Query: 404  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 463
            +  LG    G  D V RPR + +L+   V  ++ G  H V  TD G +F +GDN+  QLG
Sbjct: 4735 YHRLG---HGSDDHVRRPRKVSALQNKKVIDVACGSLHCVACTDTGEVFSWGDNDEGQLG 4791

Query: 464  HDTLRGCLEP 473
              T      P
Sbjct: 4792 DGTTNAIQRP 4801



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 83/282 (29%), Positives = 129/282 (45%), Gaps = 9/282 (3%)

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            H   +   G+VF+ G+      GH D       P L+  L G    ++  G +++  LT
Sbjct: 629 KHYMGLTSDGEVFSWGNGDGGKLGHGDYQNH-EEPALITGLSGKQVAKICCGSSYSVALT 687

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA--AGPSYMLAVTGNGVV 290
             G V++ G    G+LGHG + D+ TP  +    +   +V +A  +G +  LAVT +G V
Sbjct: 688 SNGEVYSWGKGNFGRLGHGSSEDQTTPM-LLKFFKGHRIVDVACGSGDAQTLAVTDSGAV 746

Query: 291 YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKG 350
           YS+G G    LG G       P+ I+     G  VVRV  G++  +AL  SG VYTWGKG
Sbjct: 747 YSWGDGDYGKLGRGGNDGCKTPKVIEKLM--GQDVVRVYCGNQFSMALTKSGAVYTWGKG 804

Query: 351 YCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFP 410
               LGHG E     P+ + +L S     +         + + G +YG+G    G LG P
Sbjct: 805 DNYRLGHGTEDHARHPKQIEALSSKKVKDIAIGSLHCMAITEDGELYGWGRNEQGQLGNP 864

Query: 411 DRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLF 452
              +S+    P ++  +   ++  ++ G   T   T  G+  
Sbjct: 865 --SISN-FTEPTLIGGMEGKNIIGVACGPTQTFAWTSGGQWI 903



 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 77/250 (30%), Positives = 120/250 (48%), Gaps = 10/250 (4%)

Query: 113  NMQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSAS 171
             + + +G  H L +S    V+S G    G LGHG   + C     I+      VV ++A 
Sbjct: 4550 KLAVNSGGKHCLALSAEGEVYSWGEGEDGKLGHG-NRSPCDRPRVIDSLRGKEVVDIAAG 4608

Query: 172  ENHAAFVLQSGQVFTCGDNSSFCCGHRDT-NRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
              H+A +  +G+++T G       GH D+ ++P  RP+LVEALK      +  G      
Sbjct: 4609 GAHSACITANGELYTWGKGRYGRLGHGDSEDQP--RPKLVEALKSYRVVDMACGSGDAQT 4666

Query: 231  LTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG 288
            L I    +V + G   +G+LG G +     P  I  L+  G V+++  G  + +A+T +G
Sbjct: 4667 LCITDDDNVWSWGDGDYGKLGRGGSDGCKVPMKIETLQGQG-VMKVECGSQFSVALTKSG 4725

Query: 289  VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 348
             VY++G G    LGHG      +PR +   + K   V+ V+ G  H VA   +G V++WG
Sbjct: 4726 SVYTWGKGDYHRLGHGSDDHVRRPRKVSALQNK--KVIDVACGSLHCVACTDTGEVFSWG 4783

Query: 349  KGYCGALGHG 358
                G LG G
Sbjct: 4784 DNDEGQLGDG 4793



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 71/244 (29%), Positives = 119/244 (48%), Gaps = 6/244 (2%)

Query: 235  GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 294
            G +   G N  GQLG  D      P S   L  V   +Q+  G   + AVT  G V++ G
Sbjct: 4461 GQIWGWGHNHRGQLGGVDGAKVKQPVSCEALA-VTRPIQLVGGEQTLFAVTAEGKVFATG 4519

Query: 295  SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGA 354
             G+   LG G       P  +++ +   I  + V++G +H +AL + G VY+WG+G  G 
Sbjct: 4520 YGAGGRLGVGGTESVSHPTQLESIQHVFIKKLAVNSGGKHCLALSAEGEVYSWGEGEDGK 4579

Query: 355  LGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGV 414
            LGHG+      P  + SL+    V + A    +  +   G +Y +G   +G LG  D   
Sbjct: 4580 LGHGNRSPCDRPRVIDSLRGKEVVDIAAGGAHSACITANGELYTWGKGRYGRLGHGD--- 4636

Query: 415  SDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLE 472
            S+   RP+++++L+++ V  ++  +G   T+ +TD   ++ +GD +  +LG     GC  
Sbjct: 4637 SEDQPRPKLVEALKSYRVVDMACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKV 4696

Query: 473  PTEI 476
            P +I
Sbjct: 4697 PMKI 4700



 Score = 92.8 bits (229), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 74/242 (30%), Positives = 111/242 (45%), Gaps = 7/242 (2%)

Query: 119  GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
            GR+   L ++  VFS G    G LGH      C     I    +  V  ++   +H+A +
Sbjct: 3561 GRHSLALTTDGKVFSWGEGDDGKLGHFSRWN-CDKPRLIEALKSKRVRDIACGSSHSAAI 3619

Query: 179  LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN--FTGFLTIRGH 236
              +G ++T G       GH D N    +P+ V+AL      QV  G     T  LT  G 
Sbjct: 3620 TSNGDLYTWGLGEYGRLGHGD-NTTQLKPKQVKALAHERVVQVACGSRDAQTLALTDEGK 3678

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 296
            V++ G    G+LG G +     P  +  L +   V QI  G  + LA+T +G V+++G G
Sbjct: 3679 VYSWGDGDFGKLGRGGSEGCNVPHEVDRLRD-QKVCQIECGAQFSLALTKSGQVWTWGKG 3737

Query: 297  SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 356
              F LGHG      +P+ ++    KG  +V V+ G  H +A+  SG V+ WG    G  G
Sbjct: 3738 DYFRLGHGTDAHVRKPQIVEGL--KGKKIVHVAVGALHCLAVTDSGQVFAWGDNDHGQQG 3795

Query: 357  HG 358
            +G
Sbjct: 3796 NG 3797



 Score = 89.0 bits (219), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 75/279 (26%), Positives = 127/279 (45%), Gaps = 9/279 (3%)

Query: 119 GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
           G+++  L S+  VFS G+   G LGHG +         I   S   V ++    +++  +
Sbjct: 628 GKHYMGLTSDGEVFSWGNGDGGKLGHG-DYQNHEEPALITGLSGKQVAKICCGSSYSVAL 686

Query: 179 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI--RGH 236
             +G+V++ G  +    GH  ++     P L++  KG     V  G      L +   G 
Sbjct: 687 TSNGEVYSWGKGNFGRLGH-GSSEDQTTPMLLKFFKGHRIVDVACGSGDAQTLAVTDSGA 745

Query: 237 VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG-SVVQIAAGPSYMLAVTGNGVVYSFGS 295
           V++ G   +G+LG G      TPK I  L  +G  VV++  G  + +A+T +G VY++G 
Sbjct: 746 VYSWGDGDYGKLGRGGNDGCKTPKVIEKL--MGQDVVRVYCGNQFSMALTKSGAVYTWGK 803

Query: 296 GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGAL 355
           G N+ LGHG +     P+ I+    K   V  ++ G  H +A+   G +Y WG+   G L
Sbjct: 804 GDNYRLGHGTEDHARHPKQIEALSSK--KVKDIAIGSLHCMAITEDGELYGWGRNEQGQL 861

Query: 356 GHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 394
           G+    + T P  +  ++    + V     +TF     G
Sbjct: 862 GNPSISNFTEPTLIGGMEGKNIIGVACGPTQTFAWTSGG 900



 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 62/225 (27%), Positives = 101/225 (44%), Gaps = 9/225 (4%)

Query: 116  ITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
            I  G  H+  I SN  +++ G    G LGHG  TTQ +   ++   +   VVQV+     
Sbjct: 3609 IACGSSHSAAITSNGDLYTWGLGEYGRLGHGDNTTQ-LKPKQVKALAHERVVQVACGSRD 3667

Query: 175  AA--FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            A    +   G+V++ GD      G R  +     P  V+ L+     Q+  G  F+  LT
Sbjct: 3668 AQTLALTDEGKVYSWGDGDFGKLG-RGGSEGCNVPHEVDRLRDQKVCQIECGAQFSLALT 3726

Query: 233  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
              G V T G   + +LGHG       P+ +  L+    +V +A G  + LAVT +G V++
Sbjct: 3727 KSGQVWTWGKGDYFRLGHGTDAHVRKPQIVEGLKG-KKIVHVAVGALHCLAVTDSGQVFA 3785

Query: 293  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
            +G   +   G+G      +P  +     +G  + +V+ G  H +A
Sbjct: 3786 WGDNDHGQQGNGTTTVNRKPALVVL---EGYKISKVACGSSHSIA 3827



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 58/213 (27%), Positives = 92/213 (43%), Gaps = 10/213 (4%)

Query: 113  NMQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSAS 171
            +M   +G   TL I++  +V+S G    G LG G  +  C    +I       V++V   
Sbjct: 4656 DMACGSGDAQTLCITDDDNVWSWGDGDYGKLGRG-GSDGCKVPMKIETLQGQGVMKVECG 4714

Query: 172  ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
               +  + +SG V+T G       GH   +  + RPR V AL+      V  G       
Sbjct: 4715 SQFSVALTKSGSVYTWGKGDYHRLGHGSDDH-VRRPRKVSALQNKKVIDVACGSLHCVAC 4773

Query: 232  TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLAVTGNGVV 290
            T  G V + G N  GQLG G T     P+ +A L  +G  + ++A G ++ LA + N  V
Sbjct: 4774 TDTGEVFSWGDNDEGQLGDGTTNAIQRPRLVASL--LGKKINRVACGSAHSLAWSTNKAV 4831

Query: 291  YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGI 323
             +    S+  +    +++ LQ   I   R + I
Sbjct: 4832 SAGKLPSDIPM----EYNHLQNIPITALRNRLI 4860


>gi|189241718|ref|XP_968558.2| PREDICTED: similar to hect domain and RLD 2 [Tribolium castaneum]
          Length = 4733

 Score =  134 bits (338), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 86/246 (34%), Positives = 133/246 (54%), Gaps = 8/246 (3%)

Query: 234  RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEE-VGSVVQIAAGPSYMLAVTGNGVVYS 292
             G ++ CG  T+G+LG G + + P P+ I  L + V   V + +G  + +A+T +G V+S
Sbjct: 2945 EGKLYACGEGTNGRLGLGHSNNVPYPRPIPFLSQYVIKKVAVHSGGKHAMALTLDGKVFS 3004

Query: 293  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 352
            +G G +  LGHG + +  +P+ I+  R K I    ++ G  H  A+ SSG +YTWG G  
Sbjct: 3005 WGEGEDGKLGHGNRLNLDKPKMIEALRSKKIR--DIACGSSHSAAITSSGELYTWGLGEY 3062

Query: 353  GALGHGDEIDKTLPEPLSSLKSHLAVQVC--ARKRKTFVLVDTGSVYGFGWMGFGSLGFP 410
            G LGHGD I +  P+ + SL  H  VQV   +R  +T  L D G V+ +G   FG LG  
Sbjct: 3063 GRLGHGDNITQLKPKLIKSLVGHRIVQVACGSRDAQTLALTDEGWVFSWGDGDFGKLG-- 3120

Query: 411  DRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGC 470
             RG S+    P  ++ L A  V QI  G   ++ +T  G ++ +G  +  +LGH + +  
Sbjct: 3121 -RGGSEGCNIPHNIERLNALEVVQIECGAQFSLALTKTGEVWTWGKGDYFRLGHGSDQHV 3179

Query: 471  LEPTEI 476
             +PT I
Sbjct: 3180 RKPTVI 3185



 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 94/315 (29%), Positives = 154/315 (48%), Gaps = 15/315 (4%)

Query: 158  NFPSAAHVVQVSASENHAAFVLQSGQVFTCGD--NSSFCCGHRDTNRPIFRPRLVEALKG 215
            +F S    + ++        V   G+++ CG+  N     GH + N P   PR +  L  
Sbjct: 2922 DFLSQLWPIHIAGGSKSLFIVSHEGKLYACGEGTNGRLGLGHSN-NVPY--PRPIPFLSQ 2978

Query: 216  VPCKQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
               K+V   +G      LT+ G V + G    G+LGHG+ L+   PK I  L     +  
Sbjct: 2979 YVIKKVAVHSGGKHAMALTLDGKVFSWGEGEDGKLGHGNRLNLDKPKMIEALRS-KKIRD 3037

Query: 274  IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG-- 331
            IA G S+  A+T +G +Y++G G    LGHG+   +L+P+ I++    G  +V+V+ G  
Sbjct: 3038 IACGSSHSAAITSSGELYTWGLGEYGRLGHGDNITQLKPKLIKSL--VGHRIVQVACGSR 3095

Query: 332  DEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 391
            D   +AL   G+V++WG G  G LG G      +P  +  L +   VQ+    + +  L 
Sbjct: 3096 DAQTLALTDEGWVFSWGDGDFGKLGRGGSEGCNIPHNIERLNALEVVQIECGAQFSLALT 3155

Query: 392  DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRL 451
             TG V+ +G   +  LG    G    V +P +++SL+   V  ++ G  H + VTD G++
Sbjct: 3156 KTGEVWTWGKGDYFRLG---HGSDQHVRKPTVIESLKDKKVIHVAVGALHCLAVTDTGQV 3212

Query: 452  FGFGDNERAQLGHDT 466
            + +GDN+  Q G+ T
Sbjct: 3213 YAWGDNDHGQQGNGT 3227



 Score =  132 bits (332), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 93/315 (29%), Positives = 151/315 (47%), Gaps = 7/315 (2%)

Query: 161  SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQ 220
            S    VQ+   E     V   G+V+  G  +    G   T+  +  P L+E+++ V  K+
Sbjct: 3901 STLRPVQLVGGEQTLFAVTADGKVYATGYGAGGRLGIGGTDS-VLVPTLLESIQHVFIKK 3959

Query: 221  --VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGP 278
              V +G      L+    V++ G    G+LGHG+ L   TPK I  L+    ++ IA G 
Sbjct: 3960 IAVNSGGKHCLALSADNDVYSWGEGDDGKLGHGNRLACETPKLIEALQGY-EIIDIACGG 4018

Query: 279  SYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
            ++  A+T  G +Y++G G    LGHG+  D+L+P+ I+      +  V   +GD   + +
Sbjct: 4019 AHSAAITSTGQLYTWGKGRYGRLGHGDSEDQLKPKLIEELVGYKVIDVACGSGDAQTLCI 4078

Query: 339  DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYG 398
                 V++WG G  G LG G      +P+ + SL     ++V    + +  L  +GSVY 
Sbjct: 4079 TDDDNVWSWGDGDYGKLGRGGSDGCKVPKKIESLAGLGVIKVECGSQFSVALTRSGSVYT 4138

Query: 399  FGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNE 458
            +G   +  LG    G  + V RP+ + +L+   +  I+TG  H V  +D G +F +GDN+
Sbjct: 4139 WGKGDYHRLG---HGTGEHVRRPKKVAALQGKKIISIATGSLHCVACSDEGEVFTWGDND 4195

Query: 459  RAQLGHDTLRGCLEP 473
              QLG DT      P
Sbjct: 4196 EGQLGDDTTNAIQRP 4210



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 96/345 (27%), Positives = 161/345 (46%), Gaps = 39/345 (11%)

Query: 141 VLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDT 200
           + G GP+    +S   I         Q+  S+     + Q+G+VF    +S   C     
Sbjct: 457 IFGVGPQNCDTLSELTIK--------QICCSDRTILILTQTGKVFFMYYSSDTQC----- 503

Query: 201 NRPIFRPRLVEALKGVPCKQVTA---GLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRP 257
                 P+ +  L G+   ++ A   G ++   LT    V++ G+   G+LGHGDT  + 
Sbjct: 504 ------PQEMTGLSGINMIKIAAHPEGKHYLA-LTKDYEVYSWGNGDGGRLGHGDTSTKE 556

Query: 258 TPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQT 317
            P  I  L+    ++ +  G +Y  A++ NG +Y++G G+   LGHG   D L P  I  
Sbjct: 557 EPTLIQALKG-KDIIDVECGGTYSAAISANGALYTWGRGNYGRLGHGTAEDCLTPTMISA 615

Query: 318 FRRKGIHVVRVSAGD--EHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSH 375
              +  H+++V+ G    H + + S G VY+WG G  G LG G      LP  +  L++ 
Sbjct: 616 LSDE--HIIKVACGSFYAHTLCITSQGKVYSWGDGDYGKLGRGGSDGSKLPRLIEKLQNV 673

Query: 376 LAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQI 435
             VQV    + +  L + G VY +G      LG P     + V  P +++ LR   V  +
Sbjct: 674 KIVQVYCGAQFSVALSEDGHVYTWGKGEGWKLGHP---TEENVRFPEMVEVLRDRKVVGV 730

Query: 436 STGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQE 480
           S G+ H + +TD+G ++G+G NE  Q+         + +E+F+Q+
Sbjct: 731 SLGVSHVLALTDQGEVYGWGKNENKQI--------CDSSELFVQQ 767



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 97/323 (30%), Positives = 155/323 (47%), Gaps = 18/323 (5%)

Query: 131  VFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSASE--NHAAFVLQSGQVFTC 187
            +++CG    G LG G      V + R I F S   + +V+      HA  +   G+VF+ 
Sbjct: 2948 LYACGEGTNGRLGLGHSNN--VPYPRPIPFLSQYVIKKVAVHSGGKHAMALTLDGKVFSW 3005

Query: 188  GDNSSFCCGHRDTNR-PIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHG 246
            G+      GH   NR  + +P+++EAL+    + +  G + +  +T  G ++T G   +G
Sbjct: 3006 GEGEDGKLGH--GNRLNLDKPKMIEALRSKKIRDIACGSSHSAAITSSGELYTWGLGEYG 3063

Query: 247  QLGHGDTLDRPTPKSIAPLEEVG-SVVQIAAGP--SYMLAVTGNGVVYSFGSGSNFCLGH 303
            +LGHGD + +  PK I  L  VG  +VQ+A G   +  LA+T  G V+S+G G    LG 
Sbjct: 3064 RLGHGDNITQLKPKLIKSL--VGHRIVQVACGSRDAQTLALTDEGWVFSWGDGDFGKLGR 3121

Query: 304  GEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK 363
            G       P  I+  R   + VV++  G +  +AL  +G V+TWGKG    LGHG +   
Sbjct: 3122 GGSEGCNIPHNIE--RLNALEVVQIECGAQFSLALTKTGEVWTWGKGDYFRLGHGSDQHV 3179

Query: 364  TLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRI 423
              P  + SLK    + V         + DTG VY +G    G  G    G +    +P +
Sbjct: 3180 RKPTVIESLKDKKVIHVAVGALHCLAVTDTGQVYAWGDNDHGQQG---NGTTIVNRKPAL 3236

Query: 424  LDSLRAHHVSQISTGLYHTVVVT 446
            +  L   H+++++ G  H++  T
Sbjct: 3237 VHGLEDVHINRVACGSSHSIAWT 3259



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 82/282 (29%), Positives = 137/282 (48%), Gaps = 13/282 (4%)

Query: 166  VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNR-PIFRPRLVEALKGVPCKQVTAG 224
            + V++   H   +     V++ G+      GH   NR     P+L+EAL+G     +  G
Sbjct: 3960 IAVNSGGKHCLALSADNDVYSWGEGDDGKLGH--GNRLACETPKLIEALQGYEIIDIACG 4017

Query: 225  LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG-SVVQIA--AGPSYM 281
               +  +T  G ++T G   +G+LGHGD+ D+  PK I  L  VG  V+ +A  +G +  
Sbjct: 4018 GAHSAAITSTGQLYTWGKGRYGRLGHGDSEDQLKPKLIEEL--VGYKVIDVACGSGDAQT 4075

Query: 282  LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 341
            L +T +  V+S+G G    LG G       P+ I++    G+ V++V  G +  VAL  S
Sbjct: 4076 LCITDDDNVWSWGDGDYGKLGRGGSDGCKVPKKIESL--AGLGVIKVECGSQFSVALTRS 4133

Query: 342  GYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGW 401
            G VYTWGKG    LGHG       P+ +++L+    + +           D G V+ +G 
Sbjct: 4134 GSVYTWGKGDYHRLGHGTGEHVRRPKKVAALQGKKIISIATGSLHCVACSDEGEVFTWGD 4193

Query: 402  MGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV 443
               G LG      ++ + RPR++ +L+   ++ ++ G  HT+
Sbjct: 4194 NDEGQLG---DDTTNAIQRPRLVSALQGKKITNVACGSAHTL 4232



 Score =  102 bits (254), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 72/249 (28%), Positives = 118/249 (47%), Gaps = 10/249 (4%)

Query: 232  TIRGHVHTCGSNTHGQLG--HGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 289
            T+   V   G N   QLG   G  +  P       L ++  +  IA G   +  V+  G 
Sbjct: 2891 TVGCRVFVWGLNDKDQLGGMKGSKVKLPVQSDF--LSQLWPI-HIAGGSKSLFIVSHEGK 2947

Query: 290  VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 349
            +Y+ G G+N  LG G  ++   PR I    +  I  V V +G +H +AL   G V++WG+
Sbjct: 2948 LYACGEGTNGRLGLGHSNNVPYPRPIPFLSQYVIKKVAVHSGGKHAMALTLDGKVFSWGE 3007

Query: 350  GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGF 409
            G  G LGHG+ ++   P+ + +L+S     +      +  +  +G +Y +G   +G LG 
Sbjct: 3008 GEDGKLGHGNRLNLDKPKMIEALRSKKIRDIACGSSHSAAITSSGELYTWGLGEYGRLGH 3067

Query: 410  PDRGVSDKVLRPRILDSLRAHHVSQISTGLY--HTVVVTDRGRLFGFGDNERAQLGHDTL 467
             D       L+P+++ SL  H + Q++ G     T+ +TD G +F +GD +  +LG    
Sbjct: 3068 GDNITQ---LKPKLIKSLVGHRIVQVACGSRDAQTLALTDEGWVFSWGDGDFGKLGRGGS 3124

Query: 468  RGCLEPTEI 476
             GC  P  I
Sbjct: 3125 EGCNIPHNI 3133



 Score =  102 bits (254), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 77/276 (27%), Positives = 128/276 (46%), Gaps = 7/276 (2%)

Query: 119 GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
           G+++  L  +  V+S G+   G LGHG  +T+    T I       ++ V     ++A +
Sbjct: 524 GKHYLALTKDYEVYSWGNGDGGRLGHGDTSTK-EEPTLIQALKGKDIIDVECGGTYSAAI 582

Query: 179 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI--RGH 236
             +G ++T G  +    GH  T      P ++ AL      +V  G  +   L I  +G 
Sbjct: 583 SANGALYTWGRGNYGRLGH-GTAEDCLTPTMISALSDEHIIKVACGSFYAHTLCITSQGK 641

Query: 237 VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 296
           V++ G   +G+LG G +     P+ I  L+ V  +VQ+  G  + +A++ +G VY++G G
Sbjct: 642 VYSWGDGDYGKLGRGGSDGSKLPRLIEKLQNV-KIVQVYCGAQFSVALSEDGHVYTWGKG 700

Query: 297 SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 356
             + LGH  + +   P  ++  R +   VV VS G  HV+AL   G VY WGK     + 
Sbjct: 701 EGWKLGHPTEENVRFPEMVEVLRDR--KVVGVSLGVSHVLALTDQGEVYGWGKNENKQIC 758

Query: 357 HGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVD 392
              E+    P  + +LK    V VC    ++F   D
Sbjct: 759 DSSELFVQQPRLIEALKGQKVVGVCCGPAQSFAWTD 794



 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 71/247 (28%), Positives = 127/247 (51%), Gaps = 12/247 (4%)

Query: 235  GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
            G ++  G N  GQLG   G  +  PTP ++++ L  V    Q+  G   + AVT +G VY
Sbjct: 3870 GTIYGWGHNHRGQLGGIEGAKVKIPTPCEALSTLRPV----QLVGGEQTLFAVTADGKVY 3925

Query: 292  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 351
            + G G+   LG G     L P  +++ +   I  + V++G +H +AL +   VY+WG+G 
Sbjct: 3926 ATGYGAGGRLGIGGTDSVLVPTLLESIQHVFIKKIAVNSGGKHCLALSADNDVYSWGEGD 3985

Query: 352  CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 411
             G LGHG+ +    P+ + +L+ +  + +      +  +  TG +Y +G   +G LG  D
Sbjct: 3986 DGKLGHGNRLACETPKLIEALQGYEIIDIACGGAHSAAITSTGQLYTWGKGRYGRLGHGD 4045

Query: 412  RGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG 469
               S+  L+P++++ L  + V  ++  +G   T+ +TD   ++ +GD +  +LG     G
Sbjct: 4046 ---SEDQLKPKLIEELVGYKVIDVACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDG 4102

Query: 470  CLEPTEI 476
            C  P +I
Sbjct: 4103 CKVPKKI 4109



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 78/257 (30%), Positives = 118/257 (45%), Gaps = 21/257 (8%)

Query: 119  GRYHTLLISNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHVVQVSAS 171
            G++   L  +  VFS G    G LGHG       P+  + +   +I          ++  
Sbjct: 2990 GKHAMALTLDGKVFSWGEGEDGKLGHGNRLNLDKPKMIEALRSKKIR--------DIACG 3041

Query: 172  ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN--FTG 229
             +H+A +  SG+++T G       GH D N    +P+L+++L G    QV  G     T 
Sbjct: 3042 SSHSAAITSSGELYTWGLGEYGRLGHGD-NITQLKPKLIKSLVGHRIVQVACGSRDAQTL 3100

Query: 230  FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 289
             LT  G V + G    G+LG G +     P +I  L  +  VVQI  G  + LA+T  G 
Sbjct: 3101 ALTDEGWVFSWGDGDFGKLGRGGSEGCNIPHNIERLNAL-EVVQIECGAQFSLALTKTGE 3159

Query: 290  VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 349
            V+++G G  F LGHG      +P  I++ + K   V+ V+ G  H +A+  +G VY WG 
Sbjct: 3160 VWTWGKGDYFRLGHGSDQHVRKPTVIESLKDK--KVIHVAVGALHCLAVTDTGQVYAWGD 3217

Query: 350  GYCGALGHGDEIDKTLP 366
               G  G+G  I    P
Sbjct: 3218 NDHGQQGNGTTIVNRKP 3234



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 82/309 (26%), Positives = 135/309 (43%), Gaps = 25/309 (8%)

Query: 96   FLQSVEHSSDIVETSAGNMQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSF 154
             L+S++H           + + +G  H L +S ++ V+S G    G LGHG     C + 
Sbjct: 3948 LLESIQH------VFIKKIAVNSGGKHCLALSADNDVYSWGEGDDGKLGHGNRLA-CETP 4000

Query: 155  TRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALK 214
              I       ++ ++    H+A +  +GQ++T G       GH D+   + +P+L+E L 
Sbjct: 4001 KLIEALQGYEIIDIACGGAHSAAITSTGQLYTWGKGRYGRLGHGDSEDQL-KPKLIEELV 4059

Query: 215  GVPCKQVTAGLNFTGFLTIRG--HVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV 272
            G     V  G      L I    +V + G   +G+LG G +     PK I  L  +G V+
Sbjct: 4060 GYKVIDVACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKVPKKIESLAGLG-VI 4118

Query: 273  QIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGD 332
            ++  G  + +A+T +G VY++G G    LGHG      +P+ +     +G  ++ ++ G 
Sbjct: 4119 KVECGSQFSVALTRSGSVYTWGKGDYHRLGHGTGEHVRRPKKVAAL--QGKKIISIATGS 4176

Query: 333  EHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVD 392
             H VA    G V+TWG    G L  GD+    +  P           V A + K    V 
Sbjct: 4177 LHCVACSDEGEVFTWGDNDEGQL--GDDTTNAIQRPR---------LVSALQGKKITNVA 4225

Query: 393  TGSVYGFGW 401
             GS +   W
Sbjct: 4226 CGSAHTLAW 4234



 Score = 52.8 bits (125), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 37/147 (25%), Positives = 71/147 (48%), Gaps = 5/147 (3%)

Query: 332  DEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 391
            ++  ++   SG +Y WG  + G LG  +     +P P  +L +   VQ+   ++  F + 
Sbjct: 3860 EDWTLSWGGSGTIYGWGHNHRGQLGGIEGAKVKIPTPCEALSTLRPVQLVGGEQTLFAVT 3919

Query: 392  DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRG 449
              G VY     G+G+ G    G +D VL P +L+S++   + +I+  +G  H + ++   
Sbjct: 3920 ADGKVYA---TGYGAGGRLGIGGTDSVLVPTLLESIQHVFIKKIAVNSGGKHCLALSADN 3976

Query: 450  RLFGFGDNERAQLGHDTLRGCLEPTEI 476
             ++ +G+ +  +LGH     C  P  I
Sbjct: 3977 DVYSWGEGDDGKLGHGNRLACETPKLI 4003


>gi|432095949|gb|ELK26864.1| Putative E3 ubiquitin-protein ligase HERC3 [Myotis davidii]
          Length = 1031

 Score =  134 bits (338), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 97/301 (32%), Positives = 148/301 (49%), Gaps = 29/301 (9%)

Query: 193 FCCGHRDTNRP---------IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 243
            C G+    +P         +  P++   +     K+V  G N + FL   G V+TCG N
Sbjct: 2   LCWGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLN 61

Query: 244 THGQLGHGDTLDRPTPKSIAPLEEVGS-----VVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
           T GQLGHG   ++P        E++G+     +V +A G S+ LA++  G ++S+G+GS+
Sbjct: 62  TKGQLGHGREGNKP--------EQIGALADQHIVHVACGESHSLALSDRGQLFSWGAGSD 113

Query: 299 FCLGHGEQHDELQ-PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 357
             LG     D +  PR IQ   ++ I  ++VS G+ H +AL + G  +TWGK   G LG 
Sbjct: 114 GQLGLMTTEDSVAVPRLIQKLNQQTI--LQVSCGNWHCLALAADGQFFTWGKNSHGQLGL 171

Query: 358 GDEI-DKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSD 416
           G +   +  P+ + SL+     QV A    +F L  +G+V+G+G    G LG  D    +
Sbjct: 172 GKDFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEEDRE 231

Query: 417 KVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 476
               P  +  LR   V  IS G  HT V+T  G +F FG     QLGHD++   + P  +
Sbjct: 232 S---PCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRV 288

Query: 477 F 477
            
Sbjct: 289 L 289



 Score =  128 bits (321), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 97/320 (30%), Positives = 152/320 (47%), Gaps = 11/320 (3%)

Query: 119 GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
           G +   L+ +  V++CG +  G LGHG E  +     +I   +  H+V V+  E+H+  +
Sbjct: 43  GNHSVFLLEDGEVYTCGLNTKGQLGHGREGNKP---EQIGALADQHIVHVACGESHSLAL 99

Query: 179 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVH 238
              GQ+F+ G  S    G   T   +  PRL++ L      QV+ G      L   G   
Sbjct: 100 SDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFF 159

Query: 239 TCGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 297
           T G N+HGQLG G D   + +P+ +  LE +  + Q+AAG ++  A++ +G V+ +G  +
Sbjct: 160 TWGKNSHGQLGLGKDFPSQASPQRVRSLEGI-PLAQVAAGGAHSFALSLSGAVFGWGMNN 218

Query: 298 NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 357
              LG  ++ D   P  ++  R +   VV +S G+EH   L  SG V+T+G G CG LGH
Sbjct: 219 AGQLGLSDEEDRESPCHVKLLRTQ--KVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGH 276

Query: 358 GDEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSD 416
               D+  P  +  L      Q+ C R+     +  +G +Y FG    G LG    G + 
Sbjct: 277 DSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLG---TGHTC 333

Query: 417 KVLRPRILDSLRAHHVSQIS 436
            V  P  +    A H  Q+S
Sbjct: 334 NVKCPSPVKGYWAAHRGQLS 353



 Score =  125 bits (314), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 98/309 (31%), Positives = 158/309 (51%), Gaps = 14/309 (4%)

Query: 159 FPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVP 217
           F S   V +V+   NH+ F+L+ G+V+TCG N+    GH R+ N+P      + AL    
Sbjct: 30  FISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHGREGNKP----EQIGALADQH 85

Query: 218 CKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDR-PTPKSIAPLEEVGSVVQIAA 276
              V  G + +  L+ RG + + G+ + GQLG   T D    P+ I  L +  +++Q++ 
Sbjct: 86  IVHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQ-QTILQVSC 144

Query: 277 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH-DELQPRAIQTFRRKGIHVVRVSAGDEHV 335
           G  + LA+  +G  +++G  S+  LG G+    +  P+ +++   +GI + +V+AG  H 
Sbjct: 145 GNWHCLALAADGQFFTWGKNSHGQLGLGKDFPSQASPQRVRSL--EGIPLAQVAAGGAHS 202

Query: 336 VALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGS 395
            AL  SG V+ WG    G LG  DE D+  P  +  L++   V +   +  T VL  +G 
Sbjct: 203 FALSLSGAVFGWGMNNAGQLGLSDEEDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGG 262

Query: 396 VYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV-VTDRGRLFGF 454
           V+ FG    G LG     ++D+V  PR +  L    V+QI+ G  HT+  V   G ++ F
Sbjct: 263 VFTFGAGSCGQLG--HDSMNDEV-NPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAF 319

Query: 455 GDNERAQLG 463
           G   R QLG
Sbjct: 320 GCGARGQLG 328


>gi|301113129|ref|XP_002998335.1| conserved hypothetical protein [Phytophthora infestans T30-4]
 gi|262112629|gb|EEY70681.1| conserved hypothetical protein [Phytophthora infestans T30-4]
          Length = 2353

 Score =  134 bits (338), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 102/350 (29%), Positives = 153/350 (43%), Gaps = 25/350 (7%)

Query: 131 VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDN 190
           V+SCG +  G LGHG +T    SF RI       ++Q+ A   H   +   G+VFTCG N
Sbjct: 564 VWSCGQNSYGELGHG-DTASRKSFERIQALQQKEIIQIGAGNEHTVVLTADGKVFTCGYN 622

Query: 191 SSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGH 250
            +  CG   T R      + +   G        G   T  ++  G V TCG N  GQLGH
Sbjct: 623 DNGQCGQGGTARVSHLSEIPKMDSGSSQAHAYNGCEHTILVSTDGRVATCGYNYRGQLGH 682

Query: 251 GDTLDRPTPKSIAPLEEVGSVVQIAAGPSY--MLAVTGNGV--VYSFGSGSNFCLGHGEQ 306
           G+T     PK I  LE    +V++ +   Y  +LA     +  +Y+FG      LGH + 
Sbjct: 683 GNTTSESVPKIIRSLE--NKIVRLVSCSYYHTVLACEDGNLQNLYTFGRNDYGQLGHNDS 740

Query: 307 HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP 366
            D   P+ ++    +   +V V+ G  H + + +SG  + +GK   G LG     ++  P
Sbjct: 741 IDRKIPQFVEALSDQ--QIVSVACGQYHTMVVTASGKAFAFGKNDYGQLGIDTMENQLAP 798

Query: 367 EPLSSLKSHLAVQVCARKR----KTFVLVDTGSVYGFGWMGFGSLGFPDRGVS------- 415
                ++  L  Q C   R     T  L     ++ FG   +G LG      S       
Sbjct: 799 ---VQVRGGLERQECLEIRCGYYHTIALCSGAHLFAFGRNDYGQLGLGRSNASSTSNLQL 855

Query: 416 --DKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 463
              +    R++D L    + +I+ G YHT+ V+D G ++ FG N   QLG
Sbjct: 856 QQQRFSNARLIDELEGKDIVRIACGCYHTIAVSDNGVMYVFGRNNHGQLG 905



 Score =  117 bits (294), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 76/248 (30%), Positives = 125/248 (50%), Gaps = 16/248 (6%)

Query: 236 HVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 295
            V +CG N++G+LGHGDT  R + + I  L++   ++QI AG  + + +T +G V++ G 
Sbjct: 563 EVWSCGQNSYGELGHGDTASRKSFERIQALQQ-KEIIQIGAGNEHTVVLTADGKVFTCGY 621

Query: 296 GSNFCLGHG----EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 351
             N   G G      H    P+        G        G EH + + + G V T G  Y
Sbjct: 622 NDNGQCGQGGTARVSHLSEIPKM-----DSGSSQAHAYNGCEHTILVSTDGRVATCGYNY 676

Query: 352 CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSV---YGFGWMGFGSLG 408
            G LGHG+   +++P+ + SL++ +   V      T +  + G++   Y FG   +G LG
Sbjct: 677 RGQLGHGNTTSESVPKIIRSLENKIVRLVSCSYYHTVLACEDGNLQNLYTFGRNDYGQLG 736

Query: 409 FPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLR 468
             D  +  K+  P+ +++L    +  ++ G YHT+VVT  G+ F FG N+  QLG DT+ 
Sbjct: 737 HND-SIDRKI--PQFVEALSDQQIVSVACGQYHTMVVTASGKAFAFGKNDYGQLGIDTME 793

Query: 469 GCLEPTEI 476
             L P ++
Sbjct: 794 NQLAPVQV 801



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 84/283 (29%), Positives = 130/283 (45%), Gaps = 6/283 (2%)

Query: 183 QVFTCGDNSSFCCGHRDT-NRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCG 241
           +V++CG NS    GH DT +R  F    ++AL+     Q+ AG   T  LT  G V TCG
Sbjct: 563 EVWSCGQNSYGELGHGDTASRKSFE--RIQALQQKEIIQIGAGNEHTVVLTADGKVFTCG 620

Query: 242 SNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCL 301
            N +GQ G G T        I  ++   S      G  + + V+ +G V + G      L
Sbjct: 621 YNDNGQCGQGGTARVSHLSEIPKMDSGSSQAHAYNGCEHTILVSTDGRVATCGYNYRGQL 680

Query: 302 GHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS-GYVYTWGKGYCGALGHGDE 360
           GHG    E  P+ I++   K + +V  S     +   D +   +YT+G+   G LGH D 
Sbjct: 681 GHGNTTSESVPKIIRSLENKIVRLVSCSYYHTVLACEDGNLQNLYTFGRNDYGQLGHNDS 740

Query: 361 IDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLR 420
           ID+ +P+ + +L     V V   +  T V+  +G  + FG   +G LG     + +++  
Sbjct: 741 IDRKIPQFVEALSDQQIVSVACGQYHTMVVTASGKAFAFGKNDYGQLGID--TMENQLAP 798

Query: 421 PRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 463
            ++   L      +I  G YHT+ +     LF FG N+  QLG
Sbjct: 799 VQVRGGLERQECLEIRCGYYHTIALCSGAHLFAFGRNDYGQLG 841



 Score = 95.5 bits (236), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 91/353 (25%), Positives = 152/353 (43%), Gaps = 30/353 (8%)

Query: 114 MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRI-NFPSAAHVVQVSAS 171
           +QI  G  HT+ L ++  VF+CG +  G  G G  T +    + I    S +        
Sbjct: 598 IQIGAGNEHTVVLTADGKVFTCGYNDNGQCGQGG-TARVSHLSEIPKMDSGSSQAHAYNG 656

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
             H   V   G+V TCG N     GH +T      P+++ +L+    + V+     T   
Sbjct: 657 CEHTILVSTDGRVATCGYNYRGQLGHGNTTSESV-PKIIRSLENKIVRLVSCSYYHTVLA 715

Query: 232 TIRGHV---HTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG 288
              G++   +T G N +GQLGH D++DR  P+ +  L +   +V +A G  + + VT +G
Sbjct: 716 CEDGNLQNLYTFGRNDYGQLGHNDSIDRKIPQFVEALSD-QQIVSVACGQYHTMVVTASG 774

Query: 289 VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH---VVRVSAGDEHVVALDSSGYVY 345
             ++FG      LG     ++L P  +    R G+     + +  G  H +AL S  +++
Sbjct: 775 KAFAFGKNDYGQLGIDTMENQLAPVQV----RGGLERQECLEIRCGYYHTIALCSGAHLF 830

Query: 346 TWGKGYCGALGHGDEIDKTL------------PEPLSSLKSHLAVQVCARKRKTFVLVDT 393
            +G+   G LG G     +                +  L+    V++      T  + D 
Sbjct: 831 AFGRNDYGQLGLGRSNASSTSNLQLQQQRFSNARLIDELEGKDIVRIACGCYHTIAVSDN 890

Query: 394 GSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT 446
           G +Y FG    G LG    G + + + P  +D      V+ ++ G YHTVV+T
Sbjct: 891 GVMYVFGRNNHGQLG---TGDTTERVYPFPIDDFVGKRVALVAAGFYHTVVLT 940



 Score = 84.7 bits (208), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 86/309 (27%), Positives = 135/309 (43%), Gaps = 22/309 (7%)

Query: 100 VEHSSDIVETSAGNMQI--TTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTR 156
           V H S+I +  +G+ Q     G  HT+L+S +  V +CG +  G LGHG  T++ V   +
Sbjct: 635 VSHLSEIPKMDSGSSQAHAYNGCEHTILVSTDGRVATCGYNYRGQLGHGNTTSESVP--K 692

Query: 157 INFPSAAHVVQ-VSASENHAAFVLQSGQV---FTCGDNSSFCCGHRDT-NRPIFRPRLVE 211
           I       +V+ VS S  H     + G +   +T G N     GH D+ +R I  P+ VE
Sbjct: 693 IIRSLENKIVRLVSCSYYHTVLACEDGNLQNLYTFGRNDYGQLGHNDSIDRKI--PQFVE 750

Query: 212 ALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSV 271
           AL       V  G   T  +T  G     G N +GQLG     ++  P  +    E    
Sbjct: 751 ALSDQQIVSVACGQYHTMVVTASGKAFAFGKNDYGQLGIDTMENQLAPVQVRGGLERQEC 810

Query: 272 VQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHD------ELQPRAIQTFRR----K 321
           ++I  G  + +A+     +++FG      LG G  +       +LQ +     R     +
Sbjct: 811 LEIRCGYYHTIALCSGAHLFAFGRNDYGQLGLGRSNASSTSNLQLQQQRFSNARLIDELE 870

Query: 322 GIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVC 381
           G  +VR++ G  H +A+  +G +Y +G+   G LG GD  ++  P P+          V 
Sbjct: 871 GKDIVRIACGCYHTIAVSDNGVMYVFGRNNHGQLGTGDTTERVYPFPIDDFVGKRVALVA 930

Query: 382 ARKRKTFVL 390
           A    T VL
Sbjct: 931 AGFYHTVVL 939


>gi|55727310|emb|CAH90411.1| hypothetical protein [Pongo abelii]
          Length = 975

 Score =  134 bits (338), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 97/301 (32%), Positives = 147/301 (48%), Gaps = 29/301 (9%)

Query: 193 FCCGHRDTNRP---------IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 243
            C G+    +P         +  P++   +     K+V  G N + FL   G V+TCG N
Sbjct: 2   LCWGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLN 61

Query: 244 THGQLGHGDTLDRPTPKSIAPLEEVGS-----VVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
           T GQLGH    ++P        E++G+     ++ +A G S+ LA++  G ++S+G+GS+
Sbjct: 62  TKGQLGHVREGNKP--------EQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSD 113

Query: 299 FCLGHGEQHDELQ-PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 357
             LG     D +  PR IQ   ++ I  ++VS G+ H +AL S G  +TWGK   G LG 
Sbjct: 114 GQLGLMTTEDSVAVPRLIQKLNQQTI--LQVSCGNWHCLALASDGQFFTWGKNSHGQLGL 171

Query: 358 GDEI-DKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSD 416
           G E   +  P+ + SL+     QV A    +F L  +G+V+G+G    G LG  D    +
Sbjct: 172 GKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRE 231

Query: 417 KVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 476
               P  +  LR   V  IS G  HT V+T  G +F FG     QLGHD++   + P  +
Sbjct: 232 S---PCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSYGQLGHDSMNDEVNPRRV 288

Query: 477 F 477
            
Sbjct: 289 L 289



 Score =  129 bits (323), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 98/309 (31%), Positives = 160/309 (51%), Gaps = 14/309 (4%)

Query: 159 FPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVP 217
           F S   V +V+   NH+ F+L+ G+V+TCG N+    GH R+ N+P      + AL    
Sbjct: 30  FISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHVREGNKP----EQIGALADQH 85

Query: 218 CKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDR-PTPKSIAPLEEVGSVVQIAA 276
              V  G + +  L+ RG + + G+ + GQLG   T D    P+ I  L +  +++Q++ 
Sbjct: 86  IIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQ-QTILQVSC 144

Query: 277 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH-DELQPRAIQTFRRKGIHVVRVSAGDEHV 335
           G  + LA+  +G  +++G  S+  LG G++   +  P+ +++   +GI + +V+AG  H 
Sbjct: 145 GNWHCLALASDGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSL--EGIPLAQVAAGGAHS 202

Query: 336 VALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGS 395
            AL  SG V+ WG    G LG  DE D+  P  +  L++   V +   +  T VL  +G 
Sbjct: 203 FALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGG 262

Query: 396 VYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV-VTDRGRLFGF 454
           V+ FG   +G LG     ++D+V  PR +  L    V+QI+ G  HT+  V   G ++ F
Sbjct: 263 VFTFGAGSYGQLG--HDSMNDEV-NPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAF 319

Query: 455 GDNERAQLG 463
           G   R QLG
Sbjct: 320 GCGARGQLG 328



 Score =  119 bits (297), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 93/320 (29%), Positives = 149/320 (46%), Gaps = 11/320 (3%)

Query: 119 GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
           G +   L+ +  V++CG +  G LGH  E  +     +I   +  H++ V+  E+H+  +
Sbjct: 43  GNHSVFLLEDGEVYTCGLNTKGQLGHVREGNKP---EQIGALADQHIIHVACGESHSLAL 99

Query: 179 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVH 238
              GQ+F+ G  S    G   T   +  PRL++ L      QV+ G      L   G   
Sbjct: 100 SDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALASDGQFF 159

Query: 239 TCGSNTHGQLGHGDTL-DRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 297
           T G N+HGQLG G     + +P+ +  LE +  + Q+AAG ++  A++ +G V+ +G  +
Sbjct: 160 TWGKNSHGQLGLGKEFPSQASPQRVRSLEGI-PLAQVAAGGAHSFALSLSGAVFGWGMNN 218

Query: 298 NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 357
              LG  ++ D   P  ++  R +   VV +S G+EH   L  SG V+T+G G  G LGH
Sbjct: 219 AGQLGLSDEKDRESPCHVKLLRTQ--KVVYISCGEEHTAVLTKSGGVFTFGAGSYGQLGH 276

Query: 358 GDEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSD 416
               D+  P  +  L      Q+ C R+     +  +G +Y FG    G LG    G + 
Sbjct: 277 DSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLG---TGHTC 333

Query: 417 KVLRPRILDSLRAHHVSQIS 436
            V  P  +    A H  Q+S
Sbjct: 334 NVKCPSPVKGYWAAHSGQLS 353



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 91/295 (30%), Positives = 136/295 (46%), Gaps = 22/295 (7%)

Query: 114 MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSAS 171
           + +  G  H+L +S+   +FS G+   G LG    T   V+  R I   +   ++QVS  
Sbjct: 87  IHVACGESHSLALSDRGQLFSWGAGSDGQLGLM-TTEDSVAVPRLIQKLNQQTILQVSCG 145

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
             H   +   GQ FT G NS    G          P+ V +L+G+P  QV AG   +  L
Sbjct: 146 NWHCLALASDGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFAL 205

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
           ++ G V   G N  GQLG  D  DR +P  +  L     VV I+ G  +   +T +G V+
Sbjct: 206 SLSGAVFGWGMNNAGQLGLSDEKDRESPCHVK-LLRTQKVVYISCGEEHTAVLTKSGGVF 264

Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA-LDSSGYVYTWGKG 350
           +FG+GS   LGH   +DE+ PR +      G  V +++ G +H +A + SSG +Y +G G
Sbjct: 265 TFGAGSYGQLGHDSMNDEVNPRRV--LELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCG 322

Query: 351 YCGALGHGDEIDKTLPEPLS---------------SLKSHLAVQVCARKRKTFVL 390
             G LG G   +   P P+                  K H+  Q+ +   +TFVL
Sbjct: 323 ARGQLGTGHTCNVKCPSPVKGYWAAHSGQLSARADRFKYHIVKQIFSGGDQTFVL 377


>gi|270001314|gb|EEZ97761.1| hect domain and RLD 2-like protein [Tribolium castaneum]
          Length = 3894

 Score =  134 bits (338), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 86/246 (34%), Positives = 133/246 (54%), Gaps = 8/246 (3%)

Query: 234  RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEE-VGSVVQIAAGPSYMLAVTGNGVVYS 292
             G ++ CG  T+G+LG G + + P P+ I  L + V   V + +G  + +A+T +G V+S
Sbjct: 2106 EGKLYACGEGTNGRLGLGHSNNVPYPRPIPFLSQYVIKKVAVHSGGKHAMALTLDGKVFS 2165

Query: 293  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 352
            +G G +  LGHG + +  +P+ I+  R K I    ++ G  H  A+ SSG +YTWG G  
Sbjct: 2166 WGEGEDGKLGHGNRLNLDKPKMIEALRSKKIR--DIACGSSHSAAITSSGELYTWGLGEY 2223

Query: 353  GALGHGDEIDKTLPEPLSSLKSHLAVQVC--ARKRKTFVLVDTGSVYGFGWMGFGSLGFP 410
            G LGHGD I +  P+ + SL  H  VQV   +R  +T  L D G V+ +G   FG LG  
Sbjct: 2224 GRLGHGDNITQLKPKLIKSLVGHRIVQVACGSRDAQTLALTDEGWVFSWGDGDFGKLG-- 2281

Query: 411  DRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGC 470
             RG S+    P  ++ L A  V QI  G   ++ +T  G ++ +G  +  +LGH + +  
Sbjct: 2282 -RGGSEGCNIPHNIERLNALEVVQIECGAQFSLALTKTGEVWTWGKGDYFRLGHGSDQHV 2340

Query: 471  LEPTEI 476
             +PT I
Sbjct: 2341 RKPTVI 2346



 Score =  134 bits (336), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 94/315 (29%), Positives = 154/315 (48%), Gaps = 15/315 (4%)

Query: 158  NFPSAAHVVQVSASENHAAFVLQSGQVFTCGD--NSSFCCGHRDTNRPIFRPRLVEALKG 215
            +F S    + ++        V   G+++ CG+  N     GH + N P   PR +  L  
Sbjct: 2083 DFLSQLWPIHIAGGSKSLFIVSHEGKLYACGEGTNGRLGLGHSN-NVPY--PRPIPFLSQ 2139

Query: 216  VPCKQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
               K+V   +G      LT+ G V + G    G+LGHG+ L+   PK I  L     +  
Sbjct: 2140 YVIKKVAVHSGGKHAMALTLDGKVFSWGEGEDGKLGHGNRLNLDKPKMIEALRS-KKIRD 2198

Query: 274  IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG-- 331
            IA G S+  A+T +G +Y++G G    LGHG+   +L+P+ I++    G  +V+V+ G  
Sbjct: 2199 IACGSSHSAAITSSGELYTWGLGEYGRLGHGDNITQLKPKLIKSL--VGHRIVQVACGSR 2256

Query: 332  DEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 391
            D   +AL   G+V++WG G  G LG G      +P  +  L +   VQ+    + +  L 
Sbjct: 2257 DAQTLALTDEGWVFSWGDGDFGKLGRGGSEGCNIPHNIERLNALEVVQIECGAQFSLALT 2316

Query: 392  DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRL 451
             TG V+ +G   +  LG    G    V +P +++SL+   V  ++ G  H + VTD G++
Sbjct: 2317 KTGEVWTWGKGDYFRLG---HGSDQHVRKPTVIESLKDKKVIHVAVGALHCLAVTDTGQV 2373

Query: 452  FGFGDNERAQLGHDT 466
            + +GDN+  Q G+ T
Sbjct: 2374 YAWGDNDHGQQGNGT 2388



 Score =  132 bits (331), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 93/315 (29%), Positives = 151/315 (47%), Gaps = 7/315 (2%)

Query: 161  SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQ 220
            S    VQ+   E     V   G+V+  G  +    G   T+  +  P L+E+++ V  K+
Sbjct: 3062 STLRPVQLVGGEQTLFAVTADGKVYATGYGAGGRLGIGGTDS-VLVPTLLESIQHVFIKK 3120

Query: 221  --VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGP 278
              V +G      L+    V++ G    G+LGHG+ L   TPK I  L+    ++ IA G 
Sbjct: 3121 IAVNSGGKHCLALSADNDVYSWGEGDDGKLGHGNRLACETPKLIEALQGY-EIIDIACGG 3179

Query: 279  SYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
            ++  A+T  G +Y++G G    LGHG+  D+L+P+ I+      +  V   +GD   + +
Sbjct: 3180 AHSAAITSTGQLYTWGKGRYGRLGHGDSEDQLKPKLIEELVGYKVIDVACGSGDAQTLCI 3239

Query: 339  DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYG 398
                 V++WG G  G LG G      +P+ + SL     ++V    + +  L  +GSVY 
Sbjct: 3240 TDDDNVWSWGDGDYGKLGRGGSDGCKVPKKIESLAGLGVIKVECGSQFSVALTRSGSVYT 3299

Query: 399  FGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNE 458
            +G   +  LG    G  + V RP+ + +L+   +  I+TG  H V  +D G +F +GDN+
Sbjct: 3300 WGKGDYHRLG---HGTGEHVRRPKKVAALQGKKIISIATGSLHCVACSDEGEVFTWGDND 3356

Query: 459  RAQLGHDTLRGCLEP 473
              QLG DT      P
Sbjct: 3357 EGQLGDDTTNAIQRP 3371



 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 97/323 (30%), Positives = 155/323 (47%), Gaps = 18/323 (5%)

Query: 131  VFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSASE--NHAAFVLQSGQVFTC 187
            +++CG    G LG G      V + R I F S   + +V+      HA  +   G+VF+ 
Sbjct: 2109 LYACGEGTNGRLGLGHSNN--VPYPRPIPFLSQYVIKKVAVHSGGKHAMALTLDGKVFSW 2166

Query: 188  GDNSSFCCGHRDTNR-PIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHG 246
            G+      GH   NR  + +P+++EAL+    + +  G + +  +T  G ++T G   +G
Sbjct: 2167 GEGEDGKLGH--GNRLNLDKPKMIEALRSKKIRDIACGSSHSAAITSSGELYTWGLGEYG 2224

Query: 247  QLGHGDTLDRPTPKSIAPLEEVG-SVVQIAAGP--SYMLAVTGNGVVYSFGSGSNFCLGH 303
            +LGHGD + +  PK I  L  VG  +VQ+A G   +  LA+T  G V+S+G G    LG 
Sbjct: 2225 RLGHGDNITQLKPKLIKSL--VGHRIVQVACGSRDAQTLALTDEGWVFSWGDGDFGKLGR 2282

Query: 304  GEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK 363
            G       P  I+  R   + VV++  G +  +AL  +G V+TWGKG    LGHG +   
Sbjct: 2283 GGSEGCNIPHNIE--RLNALEVVQIECGAQFSLALTKTGEVWTWGKGDYFRLGHGSDQHV 2340

Query: 364  TLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRI 423
              P  + SLK    + V         + DTG VY +G    G  G    G +    +P +
Sbjct: 2341 RKPTVIESLKDKKVIHVAVGALHCLAVTDTGQVYAWGDNDHGQQG---NGTTIVNRKPAL 2397

Query: 424  LDSLRAHHVSQISTGLYHTVVVT 446
            +  L   H+++++ G  H++  T
Sbjct: 2398 VHGLEDVHINRVACGSSHSIAWT 2420



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 82/282 (29%), Positives = 137/282 (48%), Gaps = 13/282 (4%)

Query: 166  VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNR-PIFRPRLVEALKGVPCKQVTAG 224
            + V++   H   +     V++ G+      GH   NR     P+L+EAL+G     +  G
Sbjct: 3121 IAVNSGGKHCLALSADNDVYSWGEGDDGKLGH--GNRLACETPKLIEALQGYEIIDIACG 3178

Query: 225  LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG-SVVQIA--AGPSYM 281
               +  +T  G ++T G   +G+LGHGD+ D+  PK I  L  VG  V+ +A  +G +  
Sbjct: 3179 GAHSAAITSTGQLYTWGKGRYGRLGHGDSEDQLKPKLIEEL--VGYKVIDVACGSGDAQT 3236

Query: 282  LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 341
            L +T +  V+S+G G    LG G       P+ I++    G+ V++V  G +  VAL  S
Sbjct: 3237 LCITDDDNVWSWGDGDYGKLGRGGSDGCKVPKKIESL--AGLGVIKVECGSQFSVALTRS 3294

Query: 342  GYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGW 401
            G VYTWGKG    LGHG       P+ +++L+    + +           D G V+ +G 
Sbjct: 3295 GSVYTWGKGDYHRLGHGTGEHVRRPKKVAALQGKKIISIATGSLHCVACSDEGEVFTWGD 3354

Query: 402  MGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV 443
               G LG      ++ + RPR++ +L+   ++ ++ G  HT+
Sbjct: 3355 NDEGQLG---DDTTNAIQRPRLVSALQGKKITNVACGSAHTL 3393



 Score =  102 bits (254), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 62/207 (29%), Positives = 104/207 (50%), Gaps = 5/207 (2%)

Query: 272  VQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG 331
            + IA G   +  V+  G +Y+ G G+N  LG G  ++   PR I    +  I  V V +G
Sbjct: 2091 IHIAGGSKSLFIVSHEGKLYACGEGTNGRLGLGHSNNVPYPRPIPFLSQYVIKKVAVHSG 2150

Query: 332  DEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 391
             +H +AL   G V++WG+G  G LGHG+ ++   P+ + +L+S     +      +  + 
Sbjct: 2151 GKHAMALTLDGKVFSWGEGEDGKLGHGNRLNLDKPKMIEALRSKKIRDIACGSSHSAAIT 2210

Query: 392  DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLY--HTVVVTDRG 449
             +G +Y +G   +G LG  D       L+P+++ SL  H + Q++ G     T+ +TD G
Sbjct: 2211 SSGELYTWGLGEYGRLGHGDNITQ---LKPKLIKSLVGHRIVQVACGSRDAQTLALTDEG 2267

Query: 450  RLFGFGDNERAQLGHDTLRGCLEPTEI 476
             +F +GD +  +LG     GC  P  I
Sbjct: 2268 WVFSWGDGDFGKLGRGGSEGCNIPHNI 2294



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 71/247 (28%), Positives = 127/247 (51%), Gaps = 12/247 (4%)

Query: 235  GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
            G ++  G N  GQLG   G  +  PTP ++++ L  V    Q+  G   + AVT +G VY
Sbjct: 3031 GTIYGWGHNHRGQLGGIEGAKVKIPTPCEALSTLRPV----QLVGGEQTLFAVTADGKVY 3086

Query: 292  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 351
            + G G+   LG G     L P  +++ +   I  + V++G +H +AL +   VY+WG+G 
Sbjct: 3087 ATGYGAGGRLGIGGTDSVLVPTLLESIQHVFIKKIAVNSGGKHCLALSADNDVYSWGEGD 3146

Query: 352  CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 411
             G LGHG+ +    P+ + +L+ +  + +      +  +  TG +Y +G   +G LG  D
Sbjct: 3147 DGKLGHGNRLACETPKLIEALQGYEIIDIACGGAHSAAITSTGQLYTWGKGRYGRLGHGD 3206

Query: 412  RGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG 469
               S+  L+P++++ L  + V  ++  +G   T+ +TD   ++ +GD +  +LG     G
Sbjct: 3207 ---SEDQLKPKLIEELVGYKVIDVACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDG 3263

Query: 470  CLEPTEI 476
            C  P +I
Sbjct: 3264 CKVPKKI 3270



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 78/257 (30%), Positives = 118/257 (45%), Gaps = 21/257 (8%)

Query: 119  GRYHTLLISNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHVVQVSAS 171
            G++   L  +  VFS G    G LGHG       P+  + +   +I          ++  
Sbjct: 2151 GKHAMALTLDGKVFSWGEGEDGKLGHGNRLNLDKPKMIEALRSKKIR--------DIACG 2202

Query: 172  ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN--FTG 229
             +H+A +  SG+++T G       GH D N    +P+L+++L G    QV  G     T 
Sbjct: 2203 SSHSAAITSSGELYTWGLGEYGRLGHGD-NITQLKPKLIKSLVGHRIVQVACGSRDAQTL 2261

Query: 230  FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 289
             LT  G V + G    G+LG G +     P +I  L  +  VVQI  G  + LA+T  G 
Sbjct: 2262 ALTDEGWVFSWGDGDFGKLGRGGSEGCNIPHNIERLNAL-EVVQIECGAQFSLALTKTGE 2320

Query: 290  VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 349
            V+++G G  F LGHG      +P  I++ + K   V+ V+ G  H +A+  +G VY WG 
Sbjct: 2321 VWTWGKGDYFRLGHGSDQHVRKPTVIESLKDK--KVIHVAVGALHCLAVTDTGQVYAWGD 2378

Query: 350  GYCGALGHGDEIDKTLP 366
               G  G+G  I    P
Sbjct: 2379 NDHGQQGNGTTIVNRKP 2395



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 82/309 (26%), Positives = 135/309 (43%), Gaps = 25/309 (8%)

Query: 96   FLQSVEHSSDIVETSAGNMQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSF 154
             L+S++H           + + +G  H L +S ++ V+S G    G LGHG     C + 
Sbjct: 3109 LLESIQH------VFIKKIAVNSGGKHCLALSADNDVYSWGEGDDGKLGHGNRLA-CETP 3161

Query: 155  TRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALK 214
              I       ++ ++    H+A +  +GQ++T G       GH D+   + +P+L+E L 
Sbjct: 3162 KLIEALQGYEIIDIACGGAHSAAITSTGQLYTWGKGRYGRLGHGDSEDQL-KPKLIEELV 3220

Query: 215  GVPCKQVTAGLNFTGFLTIRG--HVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV 272
            G     V  G      L I    +V + G   +G+LG G +     PK I  L  +G V+
Sbjct: 3221 GYKVIDVACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKVPKKIESLAGLG-VI 3279

Query: 273  QIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGD 332
            ++  G  + +A+T +G VY++G G    LGHG      +P+ +     +G  ++ ++ G 
Sbjct: 3280 KVECGSQFSVALTRSGSVYTWGKGDYHRLGHGTGEHVRRPKKVAAL--QGKKIISIATGS 3337

Query: 333  EHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVD 392
             H VA    G V+TWG    G L  GD+    +  P           V A + K    V 
Sbjct: 3338 LHCVACSDEGEVFTWGDNDEGQL--GDDTTNAIQRPR---------LVSALQGKKITNVA 3386

Query: 393  TGSVYGFGW 401
             GS +   W
Sbjct: 3387 CGSAHTLAW 3395



 Score = 52.8 bits (125), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 37/138 (26%), Positives = 67/138 (48%), Gaps = 5/138 (3%)

Query: 341  SGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 400
            SG +Y WG  + G LG  +     +P P  +L +   VQ+   ++  F +   G VY   
Sbjct: 3030 SGTIYGWGHNHRGQLGGIEGAKVKIPTPCEALSTLRPVQLVGGEQTLFAVTADGKVYA-- 3087

Query: 401  WMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDNE 458
              G+G+ G    G +D VL P +L+S++   + +I+  +G  H + ++    ++ +G+ +
Sbjct: 3088 -TGYGAGGRLGIGGTDSVLVPTLLESIQHVFIKKIAVNSGGKHCLALSADNDVYSWGEGD 3146

Query: 459  RAQLGHDTLRGCLEPTEI 476
              +LGH     C  P  I
Sbjct: 3147 DGKLGHGNRLACETPKLI 3164


>gi|356559685|ref|XP_003548128.1| PREDICTED: uncharacterized protein LOC100813700 [Glycine max]
          Length = 1120

 Score =  134 bits (338), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 95/305 (31%), Positives = 150/305 (49%), Gaps = 21/305 (6%)

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
           HA+ V + G+VFT G+ S  C GH    + + +PRLVEAL       V  G   +  +T+
Sbjct: 289 HASLVTRQGEVFTWGEESGGCLGH-GVGKNVVQPRLVEALTSTTVDFVACGEFHSCAVTM 347

Query: 234 RGHVHTCGSNTH--GQLGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSYMLAVTGNGVV 290
            G ++T G  TH  G LGHG  +    PK IA PLE +  +  +A GP +   VT  G +
Sbjct: 348 AGELYTWGDGTHNAGLLGHGSDVSHWIPKRIAGPLEGL-QIAFVACGPWHTALVTSTGQL 406

Query: 291 YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL-----------D 339
           ++FG G+   LGHG++ +   PR +++    G+  + V+ G  H  A+            
Sbjct: 407 FTFGDGTFGVLGHGDRQNVSYPREVESLL--GLRTIAVACGVWHTAAVVEVIATHSSTSI 464

Query: 340 SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGF 399
           SSG ++TWG G    LGHGD+  +  P  +++L      ++      T  L  +G V+  
Sbjct: 465 SSGKLFTWGDGDKNRLGHGDKEARLKPTCVAALIDSNFHKIACGHSLTAGLTKSGRVFTM 524

Query: 400 GWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNER 459
           G   +G LG P    SD  +   + D +    + +I+ G YH  V+T +  ++ +G    
Sbjct: 525 GSTVYGQLGNPQ---SDGKVPCLVGDKIARESIEEIACGAYHVAVLTSKNEVYTWGKGAN 581

Query: 460 AQLGH 464
            +LGH
Sbjct: 582 GRLGH 586



 Score = 95.9 bits (237), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 74/230 (32%), Positives = 111/230 (48%), Gaps = 27/230 (11%)

Query: 264 PLEE--VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRK 321
           PLE   V  V  IA G  +   VT  G V+++G  S  CLGHG   + +QPR ++     
Sbjct: 271 PLESSVVLDVHHIACGVRHASLVTRQGEVFTWGEESGGCLGHGVGKNVVQPRLVEALTST 330

Query: 322 GIHVVRVSAGDEHVVALDSSGYVYTWGKGY--CGALGHGDEIDKTLPE----PLSSLKSH 375
            +  V  + G+ H  A+  +G +YTWG G    G LGHG ++   +P+    PL  L+  
Sbjct: 331 TVDFV--ACGEFHSCAVTMAGELYTWGDGTHNAGLLGHGSDVSHWIPKRIAGPLEGLQ-- 386

Query: 376 LAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQI 435
           +A   C     T ++  TG ++ FG   FG LG  DR     V  PR ++SL       +
Sbjct: 387 IAFVACG-PWHTALVTSTGQLFTFGDGTFGVLGHGDR---QNVSYPREVESLLGLRTIAV 442

Query: 436 STGLYHTVVVTD-----------RGRLFGFGDNERAQLGHDTLRGCLEPT 474
           + G++HT  V +            G+LF +GD ++ +LGH      L+PT
Sbjct: 443 ACGVWHTAAVVEVIATHSSTSISSGKLFTWGDGDKNRLGHGDKEARLKPT 492



 Score = 92.4 bits (228), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 82/282 (29%), Positives = 125/282 (44%), Gaps = 21/282 (7%)

Query: 116 ITTGRYHTLLISNSS---VFSCGSSLCGVLGHGPETTQCVSFTRINFP-SAAHVVQVSAS 171
           +  G +H+  ++ +     +  G+   G+LGHG + +  +   RI  P     +  V+  
Sbjct: 335 VACGEFHSCAVTMAGELYTWGDGTHNAGLLGHGSDVSHWIP-KRIAGPLEGLQIAFVACG 393

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
             H A V  +GQ+FT GD +    GH D    +  PR VE+L G+    V  G+  T  +
Sbjct: 394 PWHTALVTSTGQLFTFGDGTFGVLGHGDRQN-VSYPREVESLLGLRTIAVACGVWHTAAV 452

Query: 232 T-----------IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 280
                         G + T G     +LGHGD   R  P  +A L +  +  +IA G S 
Sbjct: 453 VEVIATHSSTSISSGKLFTWGDGDKNRLGHGDKEARLKPTCVAALID-SNFHKIACGHSL 511

Query: 281 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 340
              +T +G V++ GS     LG+ +   ++         R+ I    ++ G  HV  L S
Sbjct: 512 TAGLTKSGRVFTMGSTVYGQLGNPQSDGKVPCLVGDKIARESIE--EIACGAYHVAVLTS 569

Query: 341 SGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKS-HLAVQVC 381
              VYTWGKG  G LGHGD  D+  P  + +LK  H+    C
Sbjct: 570 KNEVYTWGKGANGRLGHGDIEDRKTPALVEALKDRHVKYIAC 611



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 88/357 (24%), Positives = 150/357 (42%), Gaps = 56/357 (15%)

Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHVVQVSASE 172
           R+ +L+     VF+ G    G LGHG       P   + ++ T ++F        V+  E
Sbjct: 288 RHASLVTRQGEVFTWGEESGGCLGHGVGKNVVQPRLVEALTSTTVDF--------VACGE 339

Query: 173 NHAAFVLQSGQVFTCGD--NSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
            H+  V  +G+++T GD  +++   GH          R+   L+G+    V  G   T  
Sbjct: 340 FHSCAVTMAGELYTWGDGTHNAGLLGHGSDVSHWIPKRIAGPLEGLQIAFVACGPWHTAL 399

Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT----- 285
           +T  G + T G  T G LGHGD  +   P+ +  L  + ++  +A G  +  AV      
Sbjct: 400 VTSTGQLFTFGDGTFGVLGHGDRQNVSYPREVESLLGLRTIA-VACGVWHTAAVVEVIAT 458

Query: 286 ------GNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 339
                  +G ++++G G    LGHG++   L+P  +        H  +++ G      L 
Sbjct: 459 HSSTSISSGKLFTWGDGDKNRLGHGDKEARLKPTCVAALIDSNFH--KIACGHSLTAGLT 516

Query: 340 SSGYVYTWGKGYCGALGH-----------GDEIDKTLPEPLSSLKSHLAVQVCARKRKTF 388
            SG V+T G    G LG+           GD+I +   E ++    H+A           
Sbjct: 517 KSGRVFTMGSTVYGQLGNPQSDGKVPCLVGDKIARESIEEIACGAYHVA----------- 565

Query: 389 VLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVV 445
           VL     VY +G    G LG  D  + D+   P ++++L+  HV  I+ G  ++  +
Sbjct: 566 VLTSKNEVYTWGKGANGRLGHGD--IEDRKT-PALVEALKDRHVKYIACGSNYSAAI 619



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 70/238 (29%), Positives = 111/238 (46%), Gaps = 23/238 (9%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR--------------INFP 160
           +  G +HT L++++  +F+ G    GVLGHG    Q VS+ R                  
Sbjct: 390 VACGPWHTALVTSTGQLFTFGDGTFGVLGHGDR--QNVSYPREVESLLGLRTIAVACGVW 447

Query: 161 SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQ 220
             A VV+V A+  H++  + SG++FT GD      GH D      +P  V AL      +
Sbjct: 448 HTAAVVEVIAT--HSSTSISSGKLFTWGDGDKNRLGHGD-KEARLKPTCVAALIDSNFHK 504

Query: 221 VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 280
           +  G + T  LT  G V T GS  +GQLG+  + D   P  +       S+ +IA G  +
Sbjct: 505 IACGHSLTAGLTKSGRVFTMGSTVYGQLGNPQS-DGKVPCLVGDKIARESIEEIACGAYH 563

Query: 281 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
           +  +T    VY++G G+N  LGHG+  D   P  ++  + +  HV  ++ G  +  A+
Sbjct: 564 VAVLTSKNEVYTWGKGANGRLGHGDIEDRKTPALVEALKDR--HVKYIACGSNYSAAI 619


>gi|383865452|ref|XP_003708187.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Megachile
            rotundata]
          Length = 4755

 Score =  134 bits (338), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 94/309 (30%), Positives = 153/309 (49%), Gaps = 9/309 (2%)

Query: 161  SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQ 220
            SA   VQ++  E     V   G+V+  G  +    G   T+  +  P L+E+++ V  K+
Sbjct: 3927 SALRPVQLTGGEQTLFAVTADGKVYATGYGAVGRLGIGGTDS-VMMPTLLESIQHVFVKK 3985

Query: 221  V--TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS-VVQIAAG 277
            V   +G      L+  GHV++ G    G+LGHG+ L    PK I  L  +G+ +V +A G
Sbjct: 3986 VAVNSGGKHCLALSSEGHVYSWGEGDDGKLGHGNRLSYDRPKLIEEL--LGTEIVDVACG 4043

Query: 278  PSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
              +  A+T  G +Y++G G    LGHG+  D+L P+ ++  +   +  V   +GD   + 
Sbjct: 4044 GHHSAAITSAGWLYTWGKGRYGRLGHGDSEDQLTPKLVEALQDYKVIDVACGSGDAQTLC 4103

Query: 338  LDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVY 397
            +     V++WG G  G LG G      +P  + SL     ++V    + +  L  +GS+Y
Sbjct: 4104 VTDDDNVWSWGDGDYGKLGRGGSDGCKVPMKIESLAGLGVIKVECGSQFSVALTRSGSIY 4163

Query: 398  GFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDN 457
             +G   +  LG    G  D V RPR + +L+   +  I+TG  H V  +D+G +F +GDN
Sbjct: 4164 TWGKGDYHRLG---HGTDDHVRRPRKVAALQGKKIISIATGSLHCVACSDKGEVFTWGDN 4220

Query: 458  ERAQLGHDT 466
            +  QLG  T
Sbjct: 4221 DEGQLGDGT 4229



 Score =  133 bits (334), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 104/324 (32%), Positives = 154/324 (47%), Gaps = 10/324 (3%)

Query: 155  TRINF-PSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEAL 213
            T ++F  S   +VQ  AS        Q   V+  G N     G    ++ I  P   E+L
Sbjct: 2881 TSVSFLASDWEIVQEQASSQRGVETPQHSAVYVWGLNDKDQLGGLKGSK-IKLPVYSESL 2939

Query: 214  KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEE-VGSVV 272
              +    +  G      ++  G ++ CG  T+G+LG GD  +   PK I  L + V   V
Sbjct: 2940 SKLKPVHIAGGSKTLFVVSQEGKLYACGEGTNGRLGLGDDGNACEPKPIPFLSQYVIKKV 2999

Query: 273  QIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGD 332
             + +G  + LA+T +G V+S+G G +  LGHG      +PR I++ + K I    V+ G 
Sbjct: 3000 AVHSGGKHALALTQDGRVFSWGEGEDGKLGHGNCSSLDKPRLIESLKSKRIR--DVACGS 3057

Query: 333  EHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVC--ARKRKTFVL 390
             H  A+ SSG +YTWG G  G LGHGD   +  P+ + SL     +QV   +R  +T  L
Sbjct: 3058 GHSAAITSSGELYTWGLGEYGRLGHGDTNTQLKPKLVQSLVGQRVIQVACGSRDAQTMAL 3117

Query: 391  VDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGR 450
               GSVY +G   FG LG   RG SD    P ++D L    V QI  G   ++ +T  G 
Sbjct: 3118 TADGSVYSWGDGDFGKLG---RGGSDGCYTPLLVDRLNGLGVVQIECGAQFSLALTKYGE 3174

Query: 451  LFGFGDNERAQLGHDTLRGCLEPT 474
            ++ +G  +  +LGH       +PT
Sbjct: 3175 VWTWGKGDYFRLGHGNDHHVRKPT 3198



 Score =  122 bits (305), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 100/325 (30%), Positives = 157/325 (48%), Gaps = 16/325 (4%)

Query: 131  VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE--NHAAFVLQSGQVFTCG 188
            +++CG    G LG G +   C     I F S   + +V+      HA  + Q G+VF+ G
Sbjct: 2963 LYACGEGTNGRLGLGDDGNAC-EPKPIPFLSQYVIKKVAVHSGGKHALALTQDGRVFSWG 3021

Query: 189  DNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQL 248
            +      GH + +  + +PRL+E+LK    + V  G   +  +T  G ++T G   +G+L
Sbjct: 3022 EGEDGKLGHGNCSS-LDKPRLIESLKSKRIRDVACGSGHSAAITSSGELYTWGLGEYGRL 3080

Query: 249  GHGDTLDRPTPKSIAPLEEVGS-VVQIAAGP--SYMLAVTGNGVVYSFGSGSNFCLGHGE 305
            GHGDT  +  PK +  L  VG  V+Q+A G   +  +A+T +G VYS+G G    LG G 
Sbjct: 3081 GHGDTNTQLKPKLVQSL--VGQRVIQVACGSRDAQTMALTADGSVYSWGDGDFGKLGRGG 3138

Query: 306  QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTL 365
                  P  +   R  G+ VV++  G +  +AL   G V+TWGKG    LGHG++     
Sbjct: 3139 SDGCYTPLLVD--RLNGLGVVQIECGAQFSLALTKYGEVWTWGKGDYFRLGHGNDHHVRK 3196

Query: 366  PEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILD 425
            P  +  L+    + V         + DTG VY +G    G  G     V+ K   P ++ 
Sbjct: 3197 PTLVEGLRGKKVIHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNGSTIVNKK---PSLVH 3253

Query: 426  SLRAHHVSQISTGLYHTV--VVTDR 448
             L    V+++S G  H++  V+TD+
Sbjct: 3254 ELDDARVNRVSCGSSHSIAWVLTDQ 3278



 Score =  118 bits (296), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 98/334 (29%), Positives = 159/334 (47%), Gaps = 18/334 (5%)

Query: 118  TGRYHTL--LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHV----VQVSAS 171
            TG   TL  + ++  V++ G    G LG G   T  V    +   S  HV    V V++ 
Sbjct: 3935 TGGEQTLFAVTADGKVYATGYGAVGRLGIG--GTDSVMMPTL-LESIQHVFVKKVAVNSG 3991

Query: 172  ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIF-RPRLVEALKGVPCKQVTAGLNFTGF 230
              H   +   G V++ G+      GH   NR  + RP+L+E L G     V  G + +  
Sbjct: 3992 GKHCLALSSEGHVYSWGEGDDGKLGH--GNRLSYDRPKLIEELLGTEIVDVACGGHHSAA 4049

Query: 231  LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSV-VQIAAGPSYMLAVTGNGV 289
            +T  G ++T G   +G+LGHGD+ D+ TPK +  L++   + V   +G +  L VT +  
Sbjct: 4050 ITSAGWLYTWGKGRYGRLGHGDSEDQLTPKLVEALQDYKVIDVACGSGDAQTLCVTDDDN 4109

Query: 290  VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 349
            V+S+G G    LG G       P  I++    G+ V++V  G +  VAL  SG +YTWGK
Sbjct: 4110 VWSWGDGDYGKLGRGGSDGCKVPMKIESL--AGLGVIKVECGSQFSVALTRSGSIYTWGK 4167

Query: 350  GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGF 409
            G    LGHG +     P  +++L+    + +           D G V+ +G    G LG 
Sbjct: 4168 GDYHRLGHGTDDHVRRPRKVAALQGKKIISIATGSLHCVACSDKGEVFTWGDNDEGQLG- 4226

Query: 410  PDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV 443
               G +  + RPR++ +L+   +++++ G  HT+
Sbjct: 4227 --DGTTCALQRPRLVHALQGKKITRVACGSAHTL 4258



 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 84/291 (28%), Positives = 140/291 (48%), Gaps = 11/291 (3%)

Query: 178  VLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT--AGLNFTGFLTIRG 235
            V Q G+++ CG+ ++   G  D       P+ +  L     K+V   +G      LT  G
Sbjct: 2957 VSQEGKLYACGEGTNGRLGLGDDGNAC-EPKPIPFLSQYVIKKVAVHSGGKHALALTQDG 3015

Query: 236  HVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 295
             V + G    G+LGHG+      P+ I  L+    +  +A G  +  A+T +G +Y++G 
Sbjct: 3016 RVFSWGEGEDGKLGHGNCSSLDKPRLIESLKS-KRIRDVACGSGHSAAITSSGELYTWGL 3074

Query: 296  GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEHVVALDSSGYVYTWGKGYCG 353
            G    LGHG+ + +L+P+ +Q+    G  V++V+ G  D   +AL + G VY+WG G  G
Sbjct: 3075 GEYGRLGHGDTNTQLKPKLVQSL--VGQRVIQVACGSRDAQTMALTADGSVYSWGDGDFG 3132

Query: 354  ALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRG 413
             LG G       P  +  L     VQ+    + +  L   G V+ +G   +  LG    G
Sbjct: 3133 KLGRGGSDGCYTPLLVDRLNGLGVVQIECGAQFSLALTKYGEVWTWGKGDYFRLG---HG 3189

Query: 414  VSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 464
                V +P +++ LR   V  ++ G  H + VTD G+++ +GDN+  Q G+
Sbjct: 3190 NDHHVRKPTLVEGLRGKKVIHVAVGALHCLAVTDTGQVYAWGDNDHGQQGN 3240



 Score =  108 bits (271), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 84/253 (33%), Positives = 121/253 (47%), Gaps = 13/253 (5%)

Query: 119  GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTR---INFPSAAHVVQVSASENHA 175
            G++   L  +  VFS G    G LGHG     C S  +   I    +  +  V+    H+
Sbjct: 3005 GKHALALTQDGRVFSWGEGEDGKLGHG----NCSSLDKPRLIESLKSKRIRDVACGSGHS 3060

Query: 176  AFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN--FTGFLTI 233
            A +  SG+++T G       GH DTN  + +P+LV++L G    QV  G     T  LT 
Sbjct: 3061 AAITSSGELYTWGLGEYGRLGHGDTNTQL-KPKLVQSLVGQRVIQVACGSRDAQTMALTA 3119

Query: 234  RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
             G V++ G    G+LG G +    TP  +  L  +G VVQI  G  + LA+T  G V+++
Sbjct: 3120 DGSVYSWGDGDFGKLGRGGSDGCYTPLLVDRLNGLG-VVQIECGAQFSLALTKYGEVWTW 3178

Query: 294  GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 353
            G G  F LGHG  H   +P  ++  R  G  V+ V+ G  H +A+  +G VY WG    G
Sbjct: 3179 GKGDYFRLGHGNDHHVRKPTLVEGLR--GKKVIHVAVGALHCLAVTDTGQVYAWGDNDHG 3236

Query: 354  ALGHGDEIDKTLP 366
              G+G  I    P
Sbjct: 3237 QQGNGSTIVNKKP 3249



 Score =  102 bits (253), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 73/247 (29%), Positives = 124/247 (50%), Gaps = 12/247 (4%)

Query: 235  GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
            G ++  G N  GQLG   G  +  P   +S++ L  V    Q+  G   + AVT +G VY
Sbjct: 3896 GAIYGWGHNHRGQLGGLEGAKVKLPVLCESLSALRPV----QLTGGEQTLFAVTADGKVY 3951

Query: 292  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 351
            + G G+   LG G     + P  +++ +   +  V V++G +H +AL S G+VY+WG+G 
Sbjct: 3952 ATGYGAVGRLGIGGTDSVMMPTLLESIQHVFVKKVAVNSGGKHCLALSSEGHVYSWGEGD 4011

Query: 352  CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 411
             G LGHG+ +    P+ +  L     V V      +  +   G +Y +G   +G LG  D
Sbjct: 4012 DGKLGHGNRLSYDRPKLIEELLGTEIVDVACGGHHSAAITSAGWLYTWGKGRYGRLGHGD 4071

Query: 412  RGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG 469
               S+  L P+++++L+ + V  ++  +G   T+ VTD   ++ +GD +  +LG     G
Sbjct: 4072 ---SEDQLTPKLVEALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRGGSDG 4128

Query: 470  CLEPTEI 476
            C  P +I
Sbjct: 4129 CKVPMKI 4135



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 73/262 (27%), Positives = 122/262 (46%), Gaps = 9/262 (3%)

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFR-PRLVEALKGVPCKQVTAGLNFTGFL 231
            H   + +   V++ G+      GH D  R  +  P+L+E+L       +  G  ++  L
Sbjct: 516 KHYLALTEDSSVYSWGNGDGGRLGHGD--RTWYEEPKLIESLVDKNITFIACGSTYSAAL 573

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE-EVGSVVQIAAGPSYMLAVTGNGVV 290
           +  G ++T G   +G+LGHG++ D   P  ++ L   +   V   +G S  L VT +G+V
Sbjct: 574 SSNGELYTWGRGNYGRLGHGNSDDVMVPTLVSALNGHMIVYVACGSGDSQTLCVTASGIV 633

Query: 291 YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKG 350
           +S+G G    LG G  +    P+ +       I+V +V  G +   AL + G VYTWGKG
Sbjct: 634 FSWGDGDYGKLGRGGCNGSKTPKIVDKLL--DINVAKVYCGGQFSAALTAYGEVYTWGKG 691

Query: 351 YCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFP 410
               LGHG+E     P+ + +LK+    ++C        L +   VYG+G   +G +   
Sbjct: 692 EAYRLGHGNEEHVRYPKAIEALKTKKVKELCVGSLHVLALTEDQLVYGWGRNDYGQI--- 748

Query: 411 DRGVSDKVLRPRILDSLRAHHV 432
           D  +   V  P +  +L   +V
Sbjct: 749 DPALGTIVSEPTLCPTLSGKNV 770



 Score = 95.1 bits (235), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 66/232 (28%), Positives = 110/232 (47%), Gaps = 4/232 (1%)

Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 290
           LT    V++ G+   G+LGHGD      PK I  L +  ++  IA G +Y  A++ NG +
Sbjct: 521 LTEDSSVYSWGNGDGGRLGHGDRTWYEEPKLIESLVD-KNITFIACGSTYSAALSSNGEL 579

Query: 291 YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKG 350
           Y++G G+   LGHG   D + P  +       I  V   +GD   + + +SG V++WG G
Sbjct: 580 YTWGRGNYGRLGHGNSDDVMVPTLVSALNGHMIVYVACGSGDSQTLCVTASGIVFSWGDG 639

Query: 351 YCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFP 410
             G LG G       P+ +  L      +V    + +  L   G VY +G      LG  
Sbjct: 640 DYGKLGRGGCNGSKTPKIVDKLLDINVAKVYCGGQFSAALTAYGEVYTWGKGEAYRLG-- 697

Query: 411 DRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQL 462
             G  + V  P+ +++L+   V ++  G  H + +T+   ++G+G N+  Q+
Sbjct: 698 -HGNEEHVRYPKAIEALKTKKVKELCVGSLHVLALTEDQLVYGWGRNDYGQI 748



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 83/312 (26%), Positives = 134/312 (42%), Gaps = 31/312 (9%)

Query: 96   FLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSF 154
             L+S++H           + + +G  H L +S+   V+S G    G LGHG      +S+
Sbjct: 3974 LLESIQH------VFVKKVAVNSGGKHCLALSSEGHVYSWGEGDDGKLGHGNR----LSY 4023

Query: 155  TR---INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVE 211
             R   I       +V V+   +H+A +  +G ++T G       GH D+   +  P+LVE
Sbjct: 4024 DRPKLIEELLGTEIVDVACGGHHSAAITSAGWLYTWGKGRYGRLGHGDSEDQL-TPKLVE 4082

Query: 212  ALKGVPCKQVTAGLNFTGFL--TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG 269
            AL+      V  G      L  T   +V + G   +G+LG G +     P  I  L  +G
Sbjct: 4083 ALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRGGSDGCKVPMKIESLAGLG 4142

Query: 270  SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS 329
             V+++  G  + +A+T +G +Y++G G    LGHG      +PR +     +G  ++ ++
Sbjct: 4143 -VIKVECGSQFSVALTRSGSIYTWGKGDYHRLGHGTDDHVRRPRKVAAL--QGKKIISIA 4199

Query: 330  AGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFV 389
             G  H VA    G V+TWG    G LG G       P  + +L+            K   
Sbjct: 4200 TGSLHCVACSDKGEVFTWGDNDEGQLGDGTTCALQRPRLVHALQG-----------KKIT 4248

Query: 390  LVDTGSVYGFGW 401
             V  GS +   W
Sbjct: 4249 RVACGSAHTLAW 4260



 Score = 88.2 bits (217), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 71/249 (28%), Positives = 119/249 (47%), Gaps = 27/249 (10%)

Query: 119 GRYHTLLISNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHVVQVSAS 171
           G+++  L  +SSV+S G+   G LGHG       P+  + +    I F        ++  
Sbjct: 515 GKHYLALTEDSSVYSWGNGDGGRLGHGDRTWYEEPKLIESLVDKNITF--------IACG 566

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG-----VPCKQVTAGLN 226
             ++A +  +G+++T G  +    GH +++  +  P LV AL G     V C    +G +
Sbjct: 567 STYSAALSSNGELYTWGRGNYGRLGHGNSDD-VMVPTLVSALNGHMIVYVAC---GSGDS 622

Query: 227 FTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTG 286
            T  +T  G V + G   +G+LG G      TPK +  L ++ +V ++  G  +  A+T 
Sbjct: 623 QTLCVTASGIVFSWGDGDYGKLGRGGCNGSKTPKIVDKLLDI-NVAKVYCGGQFSAALTA 681

Query: 287 NGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYT 346
            G VY++G G  + LGHG +     P+AI+  + K   V  +  G  HV+AL     VY 
Sbjct: 682 YGEVYTWGKGEAYRLGHGNEEHVRYPKAIEALKTK--KVKELCVGSLHVLALTEDQLVYG 739

Query: 347 WGKGYCGAL 355
           WG+   G +
Sbjct: 740 WGRNDYGQI 748



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 51/195 (26%), Positives = 86/195 (44%), Gaps = 17/195 (8%)

Query: 281 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 340
           +L+ +GN  +  +GS + +            P+ +  F  K + ++      +H +AL  
Sbjct: 476 ILSTSGNVYMMYYGSETQY------------PQRVYGFSDKFVAMIASHPDGKHYLALTE 523

Query: 341 SGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 400
              VY+WG G  G LGHGD      P+ + SL       +      +  L   G +Y +G
Sbjct: 524 DSSVYSWGNGDGGRLGHGDRTWYEEPKLIESLVDKNITFIACGSTYSAALSSNGELYTWG 583

Query: 401 WMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDNE 458
              +G LG    G SD V+ P ++ +L  H +  ++  +G   T+ VT  G +F +GD +
Sbjct: 584 RGNYGRLG---HGNSDDVMVPTLVSALNGHMIVYVACGSGDSQTLCVTASGIVFSWGDGD 640

Query: 459 RAQLGHDTLRGCLEP 473
             +LG     G   P
Sbjct: 641 YGKLGRGGCNGSKTP 655


>gi|410918052|ref|XP_003972500.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein
           ligase HERC3-like [Takifugu rubripes]
          Length = 1031

 Score =  134 bits (338), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 94/279 (33%), Positives = 141/279 (50%), Gaps = 14/279 (5%)

Query: 203 PIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRP--TPK 260
           P+F PR      G   K++  G   + FL   G V+TCGSN+ GQLGH    ++P  TP+
Sbjct: 20  PMFEPRNCNVFTGRGLKEIVCGGQHSVFLLHDGSVYTCGSNSCGQLGH----NKPGITPE 75

Query: 261 SIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQ-PRAIQTFR 319
            +  L+    +  ++ G ++ LAV   G V+++G+G    LG G     ++ PR I+  R
Sbjct: 76  FVGALD-TQKITLVSCGQAHSLAVNEQGQVFAWGAGEEGQLGLGTTETAVRIPRLIK--R 132

Query: 320 RKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGD-EIDKTLPEPLSSLKSHLAV 378
                + +V  G++H +AL   G ++TWG+   G LG G  E  K  P+PL SL      
Sbjct: 133 LCDHRIAQVMCGNQHCIALSKDGQLFTWGQNTSGQLGLGKGEPSKLFPQPLKSLAGIPLA 192

Query: 379 QVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTG 438
           ++ A    +F L  +G+V+G+G    G LG  D  + D+ + P  +  LR+  V  IS G
Sbjct: 193 KITAGGDHSFALSLSGAVFGWGKNKAGQLGLND--IQDRAV-PCHIKFLRSQKVVHISCG 249

Query: 439 LYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF 477
             HT  +T  G LF FGD    QLGH +    L P  + 
Sbjct: 250 EEHTAALTKDGGLFTFGDGSWGQLGHGSTANELLPRRVL 288



 Score =  125 bits (313), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 100/342 (29%), Positives = 158/342 (46%), Gaps = 12/342 (3%)

Query: 135 GSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFC 194
           G +  G LG G E          N  +   + ++     H+ F+L  G V+TCG NS   
Sbjct: 5   GKAKDGQLGIGVERNPMFEPRNCNVFTGRGLKEIVCGGQHSVFLLHDGSVYTCGSNS--- 61

Query: 195 CGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTL 254
           CG    N+P   P  V AL       V+ G   +  +  +G V   G+   GQLG G T 
Sbjct: 62  CGQLGHNKPGITPEFVGALDTQKITLVSCGQAHSLAVNEQGQVFAWGAGEEGQLGLGTTE 121

Query: 255 DR-PTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGE-QHDELQP 312
                P+ I  L +   + Q+  G  + +A++ +G ++++G  ++  LG G+ +  +L P
Sbjct: 122 TAVRIPRLIKRLCD-HRIAQVMCGNQHCIALSKDGQLFTWGQNTSGQLGLGKGEPSKLFP 180

Query: 313 RAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSL 372
           + +++    GI + +++AG +H  AL  SG V+ WGK   G LG  D  D+ +P  +  L
Sbjct: 181 QPLKSL--AGIPLAKITAGGDHSFALSLSGAVFGWGKNKAGQLGLNDIQDRAVPCHIKFL 238

Query: 373 KSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHV 432
           +S   V +   +  T  L   G ++ FG   +G LG    G +   L PR +  L    V
Sbjct: 239 RSQKVVHISCGEEHTAALTKDGGLFTFGDGSWGQLG---HGSTANELLPRRVLELMGTEV 295

Query: 433 SQISTGLYHTVVVT-DRGRLFGFGDNERAQLGHDTLRGCLEP 473
           SQI+ G +HT+      G ++ FG N   QLG   L     P
Sbjct: 296 SQITCGRHHTLAFAPSSGGVYAFGCNSHGQLGTGVLSADKSP 337



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 96/311 (30%), Positives = 138/311 (44%), Gaps = 21/311 (6%)

Query: 107 VETSAGNMQITTGRYHTL-LISNSSVFSCGSSLCGVLGHG-----PETTQCVSFTRINFP 160
           V T  G  +I  G  H++ L+ + SV++CGS+ CG LGH      PE    +   +I   
Sbjct: 29  VFTGRGLKEIVCGGQHSVFLLHDGSVYTCGSNSCGQLGHNKPGITPEFVGALDTQKITL- 87

Query: 161 SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQ 220
                  VS  + H+  V + GQVF  G       G   T   +  PRL++ L      Q
Sbjct: 88  -------VSCGQAHSLAVNEQGQVFAWGAGEEGQLGLGTTETAVRIPRLIKRLCDHRIAQ 140

Query: 221 VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSV--VQIAAGP 278
           V  G      L+  G + T G NT GQLG G     P+     PL+ +  +   +I AG 
Sbjct: 141 VMCGNQHCIALSKDGQLFTWGQNTSGQLGLGK--GEPSKLFPQPLKSLAGIPLAKITAGG 198

Query: 279 SYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
            +  A++ +G V+ +G      LG  +  D   P  I+  R +   VV +S G+EH  AL
Sbjct: 199 DHSFALSLSGAVFGWGKNKAGQLGLNDIQDRAVPCHIKFLRSQ--KVVHISCGEEHTAAL 256

Query: 339 DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVY 397
              G ++T+G G  G LGHG   ++ LP  +  L      Q+ C R         +G VY
Sbjct: 257 TKDGGLFTFGDGSWGQLGHGSTANELLPRRVLELMGTEVSQITCGRHHTLAFAPSSGGVY 316

Query: 398 GFGWMGFGSLG 408
            FG    G LG
Sbjct: 317 AFGCNSHGQLG 327



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 84/259 (32%), Positives = 124/259 (47%), Gaps = 7/259 (2%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAH-VVQVSASEN 173
           ++ G+ H+L ++    VF+ G+   G LG G  T   V   R+      H + QV     
Sbjct: 88  VSCGQAHSLAVNEQGQVFAWGAGEEGQLGLG-TTETAVRIPRLIKRLCDHRIAQVMCGNQ 146

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
           H   + + GQ+FT G N+S   G          P+ +++L G+P  ++TAG + +  L++
Sbjct: 147 HCIALSKDGQLFTWGQNTSGQLGLGKGEPSKLFPQPLKSLAGIPLAKITAGGDHSFALSL 206

Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
            G V   G N  GQLG  D  DR  P  I  L     VV I+ G  +  A+T +G +++F
Sbjct: 207 SGAVFGWGKNKAGQLGLNDIQDRAVPCHIKFLRS-QKVVHISCGEEHTAALTKDGGLFTF 265

Query: 294 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL-DSSGYVYTWGKGYC 352
           G GS   LGHG   +EL PR +      G  V +++ G  H +A   SSG VY +G    
Sbjct: 266 GDGSWGQLGHGSTANELLPRRV--LELMGTEVSQITCGRHHTLAFAPSSGGVYAFGCNSH 323

Query: 353 GALGHGDEIDKTLPEPLSS 371
           G LG G       P PL +
Sbjct: 324 GQLGTGVLSADKSPYPLKT 342



 Score = 64.3 bits (155), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 66/234 (28%), Positives = 110/234 (47%), Gaps = 11/234 (4%)

Query: 115 QITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
           Q+  G  H + +S +  +F+ G +  G LG G      +    +   +   + +++A  +
Sbjct: 140 QVMCGNQHCIALSKDGQLFTWGQNTSGQLGLGKGEPSKLFPQPLKSLAGIPLAKITAGGD 199

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDT-NRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
           H+  +  SG VF  G N +   G  D  +R +  P  ++ L+      ++ G   T  LT
Sbjct: 200 HSFALSLSGAVFGWGKNKAGQLGLNDIQDRAV--PCHIKFLRSQKVVHISCGEEHTAALT 257

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS-VVQIAAGPSYMLAVT-GNGVV 290
             G + T G  + GQLGHG T +   P+ +  LE +G+ V QI  G  + LA    +G V
Sbjct: 258 KDGGLFTFGDGSWGQLGHGSTANELLPRRV--LELMGTEVSQITCGRHHTLAFAPSSGGV 315

Query: 291 YSFGSGSNFCLGHGEQHDELQPRAIQT-FRRKGIH--VVRVSAGDEHVVALDSS 341
           Y+FG  S+  LG G    +  P  ++T F    IH  V +++ G +H   L S+
Sbjct: 316 YAFGCNSHGQLGTGVLSADKSPYPLKTSFLSGSIHGTVTKITCGGDHSFLLYSN 369


>gi|359479203|ref|XP_002279847.2| PREDICTED: uncharacterized protein LOC100248282 isoform 1 [Vitis
           vinifera]
          Length = 1107

 Score =  134 bits (338), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 97/315 (30%), Positives = 153/315 (48%), Gaps = 22/315 (6%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V  ++    HAA V + G++F+ G+ S    GH   +  +  P+L+++L     + V  G
Sbjct: 314 VQNIACGGRHAALVTKQGEIFSWGEESGGRLGH-GVDSDVLHPKLIDSLSNTNIELVACG 372

Query: 225 LNFTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSI-APLEEVGSVVQIAAGPSYM 281
              T  +T+ G ++T G  T+  G LGHG+ +    PK +  PLE +  V  I+ GP + 
Sbjct: 373 EYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGI-HVSSISCGPWHT 431

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD-- 339
             VT +G +++FG G+   LGHG+     +PR +++   KG   V  + G  H  A+   
Sbjct: 432 AVVTSSGQLFTFGDGTFGVLGHGDTKSVSKPREVESL--KGHRTVISACGVWHTAAVVEI 489

Query: 340 ----------SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFV 389
                     SSG ++TWG G  G LGHGD+  K +P  +++L      +V      T  
Sbjct: 490 MVGNPSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVDPNFCRVACGHSLTVA 549

Query: 390 LVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRG 449
           L  +G VY  G   +G LG P    +D  L  R+   L    V +I+ G YH  V+T R 
Sbjct: 550 LTTSGHVYTMGSPVYGQLGNPQ---ADGKLPTRVEGKLAKSFVEEIACGAYHVAVLTSRT 606

Query: 450 RLFGFGDNERAQLGH 464
            ++ +G     +LGH
Sbjct: 607 EVYTWGKGANGRLGH 621



 Score =  112 bits (280), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 96/291 (32%), Positives = 136/291 (46%), Gaps = 22/291 (7%)

Query: 100 VEHSSDIVETSAGNMQ-ITTGRYHTLLISNSS---VFSCGSSLCGVLGHGPETTQCVSFT 155
           V H   I   S  N++ +  G YHT  ++ S     +  G+   G+LGHG E +  V   
Sbjct: 352 VLHPKLIDSLSNTNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVP-K 410

Query: 156 RINFP-SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALK 214
           R+N P    HV  +S    H A V  SGQ+FT GD +    GH DT + + +PR VE+LK
Sbjct: 411 RVNGPLEGIHVSSISCGPWHTAVVTSSGQLFTFGDGTFGVLGHGDT-KSVSKPREVESLK 469

Query: 215 GVPCKQVTAGLNFTGFLT------------IRGHVHTCGSNTHGQLGHGDTLDRPTPKSI 262
           G        G+  T  +               G + T G    G+LGHGD   +  P  +
Sbjct: 470 GHRTVISACGVWHTAAVVEIMVGNPSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCV 529

Query: 263 APLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKG 322
           A L +  +  ++A G S  +A+T +G VY+ GS     LG+ +   +L  R      +  
Sbjct: 530 AALVDP-NFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPTRVEGKLAKS- 587

Query: 323 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
             V  ++ G  HV  L S   VYTWGKG  G LGHGD  D+  P  + +LK
Sbjct: 588 -FVEEIACGAYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNSPTLVEALK 637



 Score = 95.5 bits (236), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 94/343 (27%), Positives = 149/343 (43%), Gaps = 25/343 (7%)

Query: 119 GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
           GR+  L+     +FS G    G LGHG ++   +    I+  S  ++  V+  E H   V
Sbjct: 321 GRHAALVTKQGEIFSWGEESGGRLGHGVDS-DVLHPKLIDSLSNTNIELVACGEYHTCAV 379

Query: 179 LQSGQVFTCGDNS-SF-CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
             SG ++T GD + +F   GH +        R+   L+G+    ++ G   T  +T  G 
Sbjct: 380 TLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSSGQ 439

Query: 237 VHTCGSNTHGQLGHGDTLDRPTPKSIAPLE------------EVGSVVQIAAG-PSYMLA 283
           + T G  T G LGHGDT     P+ +  L+               +VV+I  G PS   +
Sbjct: 440 LFTFGDGTFGVLGHGDTKSVSKPREVESLKGHRTVISACGVWHTAAVVEIMVGNPSS--S 497

Query: 284 VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 343
              +G ++++G G    LGHG++  +L P  +        +  RV+ G    VAL +SG+
Sbjct: 498 NCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAAL--VDPNFCRVACGHSLTVALTTSGH 555

Query: 344 VYTWGKGYCGALGHGDEIDKTLPEPLS-SLKSHLAVQVCARKRKTFVLVDTGSVYGFGWM 402
           VYT G    G LG+  + D  LP  +   L      ++        VL     VY +G  
Sbjct: 556 VYTMGSPVYGQLGN-PQADGKLPTRVEGKLAKSFVEEIACGAYHVAVLTSRTEVYTWGKG 614

Query: 403 GFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVV 445
             G LG  D   +D    P ++++L+   V  I+ G   T  +
Sbjct: 615 ANGRLGHGD---TDDRNSPTLVEALKDKQVKSIACGTNFTATI 654



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 83/296 (28%), Positives = 137/296 (46%), Gaps = 27/296 (9%)

Query: 207 PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 266
           P+ +E+   +  + +  G      +T +G + + G  + G+LGHG   D   PK I  L 
Sbjct: 303 PKALESAVVLDVQNIACGGRHAALVTKQGEIFSWGEESGGRLGHGVDSDVLHPKLIDSLS 362

Query: 267 EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS-NF-CLGHGEQHDELQPRAIQTFRRKGIH 324
              ++  +A G  +  AVT +G +Y++G G+ NF  LGHG +     P+ +     +GIH
Sbjct: 363 NT-NIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNG-PLEGIH 420

Query: 325 VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARK 384
           V  +S G  H   + SSG ++T+G G  G LGHGD    + P  + SLK H  V      
Sbjct: 421 VSSISCGPWHTAVVTSSGQLFTFGDGTFGVLGHGDTKSVSKPREVESLKGHRTVISACGV 480

Query: 385 RKTFVLVD------------TGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHV 432
             T  +V+            +G ++ +G    G LG  D+   +  L P  + +L   + 
Sbjct: 481 WHTAAVVEIMVGNPSSSNCSSGKLFTWGDGDKGRLGHGDK---EAKLVPTCVAALVDPNF 537

Query: 433 SQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI-------FIQEM 481
            +++ G   TV +T  G ++  G     QLG+    G L PT +       F++E+
Sbjct: 538 CRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKL-PTRVEGKLAKSFVEEI 592



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 70/225 (31%), Positives = 104/225 (46%), Gaps = 18/225 (8%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSA-SEN 173
           I+ G +HT ++++S  +F+ G    GVLGHG   T+ VS  R       H   +SA    
Sbjct: 424 ISCGPWHTAVVTSSGQLFTFGDGTFGVLGHG--DTKSVSKPREVESLKGHRTVISACGVW 481

Query: 174 HAAFVLQ------------SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQV 221
           H A V++            SG++FT GD      GH D    +  P  V AL      +V
Sbjct: 482 HTAAVVEIMVGNPSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLV-PTCVAALVDPNFCRV 540

Query: 222 TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 281
             G + T  LT  GHV+T GS  +GQLG+    D   P  +        V +IA G  ++
Sbjct: 541 ACGHSLTVALTTSGHVYTMGSPVYGQLGNPQA-DGKLPTRVEGKLAKSFVEEIACGAYHV 599

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVV 326
             +T    VY++G G+N  LGHG+  D   P  ++  + K +  +
Sbjct: 600 AVLTSRTEVYTWGKGANGRLGHGDTDDRNSPTLVEALKDKQVKSI 644



 Score = 39.7 bits (91), Expect = 3.6,   Method: Compositional matrix adjust.
 Identities = 34/114 (29%), Positives = 55/114 (48%), Gaps = 4/114 (3%)

Query: 125 LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ-VSASENHAAFVLQSGQ 183
           L ++  V++ GS + G LG+ P+    +  TR+    A   V+ ++    H A +    +
Sbjct: 550 LTTSGHVYTMGSPVYGQLGN-PQADGKLP-TRVEGKLAKSFVEEIACGAYHVAVLTSRTE 607

Query: 184 VFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHV 237
           V+T G  ++   GH DT+     P LVEALK    K +  G NFT  + +   V
Sbjct: 608 VYTWGKGANGRLGHGDTD-DRNSPTLVEALKDKQVKSIACGTNFTATICLHKWV 660


>gi|255544003|ref|XP_002513064.1| Ran GTPase binding protein, putative [Ricinus communis]
 gi|223548075|gb|EEF49567.1| Ran GTPase binding protein, putative [Ricinus communis]
          Length = 1096

 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 96/315 (30%), Positives = 153/315 (48%), Gaps = 22/315 (6%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V  ++    HAA V + G+VF+ G+      GH   +  +  P+LV+ LK    + V  G
Sbjct: 307 VQTIACGRRHAALVTKQGEVFSWGEELGGRLGH-GVDSDVLHPKLVDGLKNTNVELVACG 365

Query: 225 LNFTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSI-APLEEVGSVVQIAAGPSYM 281
              +  +T+ G ++T G ++H  G LG+ +      PK +  PLE +  V  ++ GP + 
Sbjct: 366 EYHSCAVTLSGDLYTWGGSSHNCGLLGYRNEASNWVPKKLNGPLEGI-HVAAVSCGPWHT 424

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL--- 338
             VT +G +++FG G+   LGHG++     PR +++   KG+  VR + G  H  A+   
Sbjct: 425 AVVTSSGQLFTFGDGTFGVLGHGDRRSVSTPREVESL--KGLRTVRAACGVWHTAAVVEV 482

Query: 339 ---------DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFV 389
                     SSG ++TWG G  G LGHGD+  + +P  +++L      QV      T  
Sbjct: 483 MVGSSSSSNCSSGKLFTWGDGDKGRLGHGDKESRLVPTCVAALVEPNFCQVACGHSMTVA 542

Query: 390 LVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRG 449
           L  TG VY  G   +G LG P    +D  L  R+   L  + V ++  G YH  V+T R 
Sbjct: 543 LTTTGHVYTMGSPVYGQLGNPQ---ADGKLPVRVEGKLSKNFVEELDCGAYHVAVLTSRT 599

Query: 450 RLFGFGDNERAQLGH 464
            ++ +G     +LGH
Sbjct: 600 EVYTWGKGANGRLGH 614



 Score =  115 bits (287), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 93/274 (33%), Positives = 130/274 (47%), Gaps = 21/274 (7%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSL--CGVLGHGPETTQCVSFTRINFP-SAAHVVQVSAS 171
           +  G YH+  ++ S  +++ G S   CG+LG+  E +  V   ++N P    HV  VS  
Sbjct: 362 VACGEYHSCAVTLSGDLYTWGGSSHNCGLLGYRNEASNWVP-KKLNGPLEGIHVAAVSCG 420

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
             H A V  SGQ+FT GD +    GH D  R +  PR VE+LKG+   +   G+  T  +
Sbjct: 421 PWHTAVVTSSGQLFTFGDGTFGVLGHGD-RRSVSTPREVESLKGLRTVRAACGVWHTAAV 479

Query: 232 T------------IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPS 279
                          G + T G    G+LGHGD   R  P  +A L E  +  Q+A G S
Sbjct: 480 VEVMVGSSSSSNCSSGKLFTWGDGDKGRLGHGDKESRLVPTCVAALVEP-NFCQVACGHS 538

Query: 280 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 339
             +A+T  G VY+ GS     LG+ +   +L  R      +    V  +  G  HV  L 
Sbjct: 539 MTVALTTTGHVYTMGSPVYGQLGNPQADGKLPVRVEGKLSKN--FVEELDCGAYHVAVLT 596

Query: 340 SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
           S   VYTWGKG  G LGHGD  D++ P  + +LK
Sbjct: 597 SRTEVYTWGKGANGRLGHGDTDDRSSPTIVEALK 630



 Score = 95.9 bits (237), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 94/346 (27%), Positives = 150/346 (43%), Gaps = 24/346 (6%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           I  GR H  L++    VFS G  L G LGHG + +  +    ++     +V  V+  E H
Sbjct: 310 IACGRRHAALVTKQGEVFSWGEELGGRLGHGVD-SDVLHPKLVDGLKNTNVELVACGEYH 368

Query: 175 AAFVLQSGQVFTCGDNSSFC--CGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
           +  V  SG ++T G +S  C   G+R+        +L   L+G+    V+ G   T  +T
Sbjct: 369 SCAVTLSGDLYTWGGSSHNCGLLGYRNEASNWVPKKLNGPLEGIHVAAVSCGPWHTAVVT 428

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE------------EVGSVVQIAAGPSY 280
             G + T G  T G LGHGD     TP+ +  L+               +VV++  G S 
Sbjct: 429 SSGQLFTFGDGTFGVLGHGDRRSVSTPREVESLKGLRTVRAACGVWHTAAVVEVMVG-SS 487

Query: 281 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 340
             +   +G ++++G G    LGHG++   L P  +        +  +V+ G    VAL +
Sbjct: 488 SSSNCSSGKLFTWGDGDKGRLGHGDKESRLVPTCVAALVEP--NFCQVACGHSMTVALTT 545

Query: 341 SGYVYTWGKGYCGALGHGDEIDKTLPEPLS-SLKSHLAVQVCARKRKTFVLVDTGSVYGF 399
           +G+VYT G    G LG+  + D  LP  +   L  +   ++        VL     VY +
Sbjct: 546 TGHVYTMGSPVYGQLGN-PQADGKLPVRVEGKLSKNFVEELDCGAYHVAVLTSRTEVYTW 604

Query: 400 GWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVV 445
           G    G LG  D   +D    P I+++L+   V  +  G   T  +
Sbjct: 605 GKGANGRLGHGD---TDDRSSPTIVEALKDKQVKSVVCGTSFTAAI 647



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 82/299 (27%), Positives = 135/299 (45%), Gaps = 27/299 (9%)

Query: 205 FRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP 264
           F P+ +E+   +  + +  G      +T +G V + G    G+LGHG   D   PK +  
Sbjct: 294 FVPKALESAVLLDVQTIACGRRHAALVTKQGEVFSWGEELGGRLGHGVDSDVLHPKLVDG 353

Query: 265 LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC--LGHGEQHDELQPRAIQTFRRKG 322
           L+   +V  +A G  +  AVT +G +Y++G  S+ C  LG+  +     P+ +     +G
Sbjct: 354 LKNT-NVELVACGEYHSCAVTLSGDLYTWGGSSHNCGLLGYRNEASNWVPKKLNG-PLEG 411

Query: 323 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCA 382
           IHV  VS G  H   + SSG ++T+G G  G LGHGD    + P  + SLK    V+   
Sbjct: 412 IHVAAVSCGPWHTAVVTSSGQLFTFGDGTFGVLGHGDRRSVSTPREVESLKGLRTVRAAC 471

Query: 383 RKRKTFVLVDT------------GSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAH 430
               T  +V+             G ++ +G    G LG  D+   +  L P  + +L   
Sbjct: 472 GVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDKGRLGHGDK---ESRLVPTCVAALVEP 528

Query: 431 HVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI-------FIQEME 482
           +  Q++ G   TV +T  G ++  G     QLG+    G L P  +       F++E++
Sbjct: 529 NFCQVACGHSMTVALTTTGHVYTMGSPVYGQLGNPQADGKL-PVRVEGKLSKNFVEELD 586



 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 49/171 (28%), Positives = 80/171 (46%), Gaps = 6/171 (3%)

Query: 308 DELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPE 367
           D   P+A+++     + V  ++ G  H   +   G V++WG+   G LGHG + D   P+
Sbjct: 292 DSFVPKALESAVL--LDVQTIACGRRHAALVTKQGEVFSWGEELGGRLGHGVDSDVLHPK 349

Query: 368 PLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGF--GSLGFPDRGVSDKVLRPRILD 425
            +  LK+     V   +  +  +  +G +Y +G      G LG+  R  +   +  ++  
Sbjct: 350 LVDGLKNTNVELVACGEYHSCAVTLSGDLYTWGGSSHNCGLLGY--RNEASNWVPKKLNG 407

Query: 426 SLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 476
            L   HV+ +S G +HT VVT  G+LF FGD     LGH   R    P E+
Sbjct: 408 PLEGIHVAAVSCGPWHTAVVTSSGQLFTFGDGTFGVLGHGDRRSVSTPREV 458



 Score = 47.8 bits (112), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 50/195 (25%), Positives = 85/195 (43%), Gaps = 14/195 (7%)

Query: 92  RVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQC 151
           R +R    V H++ +VE       +  G   +   S+  +F+ G    G LGHG + ++ 
Sbjct: 465 RTVRAACGVWHTAAVVE-------VMVGSSSSSNCSSGKLFTWGDGDKGRLGHGDKESRL 517

Query: 152 VSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGH--RDTNRPIFRPRL 209
           V  T +      +  QV+   +    +  +G V+T G       G+   D   P+   R+
Sbjct: 518 VP-TCVAALVEPNFCQVACGHSMTVALTTTGHVYTMGSPVYGQLGNPQADGKLPV---RV 573

Query: 210 VEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG 269
              L     +++  G      LT R  V+T G   +G+LGHGDT DR +P  +  L++  
Sbjct: 574 EGKLSKNFVEELDCGAYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRSSPTIVEALKD-K 632

Query: 270 SVVQIAAGPSYMLAV 284
            V  +  G S+  A+
Sbjct: 633 QVKSVVCGTSFTAAI 647



 Score = 43.9 bits (102), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 42/127 (33%), Positives = 60/127 (47%), Gaps = 14/127 (11%)

Query: 339 DSSGYVYTWGKGYCGALGHGD---------EIDKTLPEPLSSLKSHLAVQVCARKRKTFV 389
           D+ G VY WG+G  G +  G            D  +P+ L S    L VQ  A  R+   
Sbjct: 260 DALGDVYIWGEGTAGGILGGGMNGVGGSGVRTDSFVPKALESA-VLLDVQTIACGRRHAA 318

Query: 390 LV-DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDR 448
           LV   G V+ +G    G LG    GV   VL P+++D L+  +V  ++ G YH+  VT  
Sbjct: 319 LVTKQGEVFSWGEELGGRLGH---GVDSDVLHPKLVDGLKNTNVELVACGEYHSCAVTLS 375

Query: 449 GRLFGFG 455
           G L+ +G
Sbjct: 376 GDLYTWG 382


>gi|449446720|ref|XP_004141119.1| PREDICTED: uncharacterized protein LOC101220986 [Cucumis sativus]
          Length = 1075

 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 104/324 (32%), Positives = 148/324 (45%), Gaps = 18/324 (5%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V Q++    H A V + G+VFT G+      GH   +R   RP LVE L       V  G
Sbjct: 268 VQQIACGVRHIALVTRQGEVFTWGEECGGRLGH-GIDRDFSRPHLVEFLAVSHVDFVACG 326

Query: 225 LNFTGFLTIRGHVHTCGSN--THGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 282
              T  +T    ++T G      G LGHG  +    PK +    E   V+ +A G  +  
Sbjct: 327 EYHTCAITSSNDLYTWGDGIFNSGILGHGTDISHWIPKRVVGSLEGLQVLSVACGTWHSA 386

Query: 283 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL---- 338
             T NG +Y+FG G+   LGHG++   + PR +Q     G+  ++V+ G  H  A+    
Sbjct: 387 LATSNGKLYTFGDGTYGVLGHGDRESVVYPREVQLL--SGLRTIKVACGVWHTAAIVEVM 444

Query: 339 ------DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVD 392
                  SS  ++TWG G    LGHG++    LP  +SSL  +   Q+      T  L  
Sbjct: 445 SQTGSNMSSRKLFTWGDGDKYRLGHGNKETYLLPTCVSSLIDYNFHQLACGHNMTVALTT 504

Query: 393 TGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLF 452
           +G V+  G   +G LG P    SD V+   + D L    V +IS G YHTVV+T R  +F
Sbjct: 505 SGHVFTMGGTAYGQLGNPS---SDGVIPCLVQDRLVGEFVEEISCGAYHTVVLTSRNEVF 561

Query: 453 GFGDNERAQLGHDTLRGCLEPTEI 476
            +G     +LGH  +     PT I
Sbjct: 562 SWGRGSNGRLGHGDVEDRKAPTLI 585



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 95/349 (27%), Positives = 154/349 (44%), Gaps = 28/349 (8%)

Query: 114 MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR---INFPSAAHVVQVS 169
            QI  G  H  L++    VF+ G    G LGHG +      F+R   + F + +HV  V+
Sbjct: 269 QQIACGVRHIALVTRQGEVFTWGEECGGRLGHGIDR----DFSRPHLVEFLAVSHVDFVA 324

Query: 170 ASENHAAFVLQSGQVFTCGDN--SSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF 227
             E H   +  S  ++T GD   +S   GH          R+V +L+G+    V  G   
Sbjct: 325 CGEYHTCAITSSNDLYTWGDGIFNSGILGHGTDISHWIPKRVVGSLEGLQVLSVACGTWH 384

Query: 228 TGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV--- 284
           +   T  G ++T G  T+G LGHGD      P+ +  L  +   +++A G  +  A+   
Sbjct: 385 SALATSNGKLYTFGDGTYGVLGHGDRESVVYPREVQLLSGL-RTIKVACGVWHTAAIVEV 443

Query: 285 ---TGNGV----VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
              TG+ +    ++++G G  + LGHG +   L P  + +      H  +++ G    VA
Sbjct: 444 MSQTGSNMSSRKLFTWGDGDKYRLGHGNKETYLLPTCVSSLIDYNFH--QLACGHNMTVA 501

Query: 338 LDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSS-LKSHLAVQVCARKRKTFVLVDTGSV 396
           L +SG+V+T G    G LG+    D  +P  +   L      ++      T VL     V
Sbjct: 502 LTTSGHVFTMGGTAYGQLGNPSS-DGVIPCLVQDRLVGEFVEEISCGAYHTVVLTSRNEV 560

Query: 397 YGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVV 445
           + +G    G LG  D  V D+   P ++++L+  HV  IS G   T  +
Sbjct: 561 FSWGRGSNGRLGHGD--VEDRKA-PTLIEALKDRHVKSISCGSNFTASI 606



 Score = 62.4 bits (150), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 48/173 (27%), Positives = 81/173 (46%), Gaps = 6/173 (3%)

Query: 306 QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTL 365
           ++D L P+ ++T     + V +++ G  H+  +   G V+TWG+   G LGHG + D + 
Sbjct: 251 KNDVLTPKPLET--NVVLDVQQIACGVRHIALVTRQGEVFTWGEECGGRLGHGIDRDFSR 308

Query: 366 PEPLSSLK-SHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRP-RI 423
           P  +  L  SH+    C  +  T  +  +  +Y +G   F S G    G       P R+
Sbjct: 309 PHLVEFLAVSHVDFVACG-EYHTCAITSSNDLYTWGDGIFNS-GILGHGTDISHWIPKRV 366

Query: 424 LDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 476
           + SL    V  ++ G +H+ + T  G+L+ FGD     LGH      + P E+
Sbjct: 367 VGSLEGLQVLSVACGTWHSALATSNGKLYTFGDGTYGVLGHGDRESVVYPREV 419


>gi|194864811|ref|XP_001971119.1| GG14780 [Drosophila erecta]
 gi|190652902|gb|EDV50145.1| GG14780 [Drosophila erecta]
          Length = 1058

 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 108/360 (30%), Positives = 167/360 (46%), Gaps = 25/360 (6%)

Query: 125 LISNSSVFSCGSSLCGVLGHG-PETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQ 183
           + S   ++  GS+  G LG G  E  Q ++ ++I +     V QV+    H  F+  +G+
Sbjct: 1   MASGKELYCWGSTSHGQLGLGGIEDEQILTPSQIPWTPDTAVEQVACGHRHTLFLTANGK 60

Query: 184 VFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 243
           V+ CG N     GH   + P  RP L+  L+     Q++ G   +  L+  G V + G N
Sbjct: 61  VYACGSNDHSQLGH---DLPTKRPLLIPELQDYVIIQISCGSRHSLALSDWGQVLSWGDN 117

Query: 244 THGQLGHGDTLDRPTPKSIAPLEEV------GSVVQIAAGPSYMLAVTGNGVVYSFGSGS 297
             GQLGH       T K I  L +V       +VVQIA G ++ LA+T  G +YS+GS  
Sbjct: 118 DCGQLGHA------TDKEIMQLPKVVRQLVSKTVVQIACGNNHSLALTSCGELYSWGSNI 171

Query: 298 NFCLGHGEQHDELQ---PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGA 354
              LG     D      P  + T    GI +  ++ G  H   +  SG V+ WG+  CG 
Sbjct: 172 YGQLGVNSPKDLTHCNYPLRLTTLL--GIPLAAIACGGNHSFLISKSGAVFGWGRNNCGQ 229

Query: 355 LGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGV 414
           LG  DE ++  P  L +L++     V      +  L + G V+  G   +G LG    G 
Sbjct: 230 LGLNDETNRAYPTQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGAYGQLG---HGF 286

Query: 415 SDKVLRPRILDSLRAHHVSQISTGLYHTV-VVTDRGRLFGFGDNERAQLGHDTLRGCLEP 473
           S   + PR++  L    ++Q++ G  HT+ +V  RGR++ FG     QLG  + +  + P
Sbjct: 287 SSNEMLPRMVMELMGSTITQVACGNRHTLALVPSRGRVYAFGLGSSGQLGTRSTKSLMLP 346



 Score =  111 bits (277), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 94/301 (31%), Positives = 138/301 (45%), Gaps = 15/301 (4%)

Query: 115 QITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
           Q+  G  HTL L +N  V++CGS+    LGH   T + +    +       ++Q+S    
Sbjct: 44  QVACGHRHTLFLTANGKVYACGSNDHSQLGHDLPTKRPLLIPELQ---DYVIIQISCGSR 100

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
           H+  +   GQV + GDN     GH      +  P++V  L      Q+  G N +  LT 
Sbjct: 101 HSLALSDWGQVLSWGDNDCGQLGHATDKEIMQLPKVVRQLVSKTVVQIACGNNHSLALTS 160

Query: 234 RGHVHTCGSNTHGQLGHGDTLDRP---TPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 290
            G +++ GSN +GQLG     D      P  +  L  +  +  IA G ++   ++ +G V
Sbjct: 161 CGELYSWGSNIYGQLGVNSPKDLTHCNYPLRLTTLLGI-PLAAIACGGNHSFLISKSGAV 219

Query: 291 YSFGSGSNFC--LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 348
             FG G N C  LG  ++ +   P  ++T R  G+    V+ GDE  V L + G V+T G
Sbjct: 220 --FGWGRNNCGQLGLNDETNRAYPTQLKTLRTLGVRF--VACGDEFSVFLTNEGGVFTCG 275

Query: 349 KGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDT-GSVYGFGWMGFGSL 407
            G  G LGHG   ++ LP  +  L      QV    R T  LV + G VY FG    G L
Sbjct: 276 AGAYGQLGHGFSSNEMLPRMVMELMGSTITQVACGNRHTLALVPSRGRVYAFGLGSSGQL 335

Query: 408 G 408
           G
Sbjct: 336 G 336



 Score = 98.2 bits (243), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 74/244 (30%), Positives = 112/244 (45%), Gaps = 8/244 (3%)

Query: 236 HVHTCGSNTHGQLGHGDTLDRP--TPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
            ++  GS +HGQLG G   D    TP  I P     +V Q+A G  + L +T NG VY+ 
Sbjct: 6   ELYCWGSTSHGQLGLGGIEDEQILTPSQI-PWTPDTAVEQVACGHRHTLFLTANGKVYAC 64

Query: 294 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 353
           GS  +  LGH    D    R +     +   ++++S G  H +AL   G V +WG   CG
Sbjct: 65  GSNDHSQLGH----DLPTKRPLLIPELQDYVIIQISCGSRHSLALSDWGQVLSWGDNDCG 120

Query: 354 ALGHG-DEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDR 412
            LGH  D+    LP+ +  L S   VQ+      +  L   G +Y +G   +G LG    
Sbjct: 121 QLGHATDKEIMQLPKVVRQLVSKTVVQIACGNNHSLALTSCGELYSWGSNIYGQLGVNSP 180

Query: 413 GVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLE 472
                   P  L +L    ++ I+ G  H+ +++  G +FG+G N   QLG +       
Sbjct: 181 KDLTHCNYPLRLTTLLGIPLAAIACGGNHSFLISKSGAVFGWGRNNCGQLGLNDETNRAY 240

Query: 473 PTEI 476
           PT++
Sbjct: 241 PTQL 244



 Score = 95.9 bits (237), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 76/261 (29%), Positives = 120/261 (45%), Gaps = 13/261 (4%)

Query: 114 MQITTGRYHTLLISN-SSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +QI+ G  H+L +S+   V S G + CG LGH  +         +    +  VVQ++   
Sbjct: 93  IQISCGSRHSLALSDWGQVLSWGDNDCGQLGHATDKEIMQLPKVVRQLVSKTVVQIACGN 152

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRP-----IFRPRLVEALKGVPCKQVTAGLNF 227
           NH+  +   G++++ G N     G    N P        P  +  L G+P   +  G N 
Sbjct: 153 NHSLALTSCGELYSWGSN---IYGQLGVNSPKDLTHCNYPLRLTTLLGIPLAAIACGGNH 209

Query: 228 TGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN 287
           +  ++  G V   G N  GQLG  D  +R  P  +  L  +G V  +A G  + + +T  
Sbjct: 210 SFLISKSGAVFGWGRNNCGQLGLNDETNRAYPTQLKTLRTLG-VRFVACGDEFSVFLTNE 268

Query: 288 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL-DSSGYVYT 346
           G V++ G+G+   LGHG   +E+ PR +      G  + +V+ G+ H +AL  S G VY 
Sbjct: 269 GGVFTCGAGAYGQLGHGFSSNEMLPRMVMELM--GSTITQVACGNRHTLALVPSRGRVYA 326

Query: 347 WGKGYCGALGHGDEIDKTLPE 367
           +G G  G LG        LP+
Sbjct: 327 FGLGSSGQLGTRSTKSLMLPQ 347



 Score = 81.6 bits (200), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 69/208 (33%), Positives = 107/208 (51%), Gaps = 10/208 (4%)

Query: 114 MQITTGRYHTL-LISNSSVFSCGSSLCGVLG-HGP-ETTQCVSFTRINFPSAAHVVQVSA 170
           +QI  G  H+L L S   ++S GS++ G LG + P + T C    R+       +  ++ 
Sbjct: 146 VQIACGNNHSLALTSCGELYSWGSNIYGQLGVNSPKDLTHCNYPLRLTTLLGIPLAAIAC 205

Query: 171 SENHAAFVLQSGQVFTCGDNSSFCCGHRD-TNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
             NH+  + +SG VF  G N+    G  D TNR    P  ++ L+ +  + V  G  F+ 
Sbjct: 206 GGNHSFLISKSGAVFGWGRNNCGQLGLNDETNRAY--PTQLKTLRTLGVRFVACGDEFSV 263

Query: 230 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGN 287
           FLT  G V TCG+  +GQLGHG + +   P+ +  +E +GS + Q+A G  + LA V   
Sbjct: 264 FLTNEGGVFTCGAGAYGQLGHGFSSNEMLPRMV--MELMGSTITQVACGNRHTLALVPSR 321

Query: 288 GVVYSFGSGSNFCLGHGEQHDELQPRAI 315
           G VY+FG GS+  LG       + P+ +
Sbjct: 322 GRVYAFGLGSSGQLGTRSTKSLMLPQVV 349


>gi|195490361|ref|XP_002093107.1| GE21143 [Drosophila yakuba]
 gi|194179208|gb|EDW92819.1| GE21143 [Drosophila yakuba]
          Length = 1057

 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 108/360 (30%), Positives = 166/360 (46%), Gaps = 25/360 (6%)

Query: 125 LISNSSVFSCGSSLCGVLGHG-PETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQ 183
           + S   ++  GS+  G LG G  E  Q ++ ++I +     V QV+    H  F+  +G+
Sbjct: 1   MASGKELYCWGSTSHGQLGLGGIEDEQILTPSQIPWTPDTAVQQVACGHRHTLFLTANGK 60

Query: 184 VFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 243
           V+ CG N     GH     P  RP L+  L+     Q++ G   +  L+  G V + G N
Sbjct: 61  VYACGSNDHSQLGHE---LPTKRPLLIPELQDYVVIQISCGSRHSLALSEWGQVLSWGDN 117

Query: 244 THGQLGHGDTLDRPTPKSIAPLEEV------GSVVQIAAGPSYMLAVTGNGVVYSFGSGS 297
             GQLGH       T K I  L +V       +VVQIA G ++ LA+T  G +YS+GS  
Sbjct: 118 DCGQLGHA------TDKEIVQLPKVVRQLVSKTVVQIACGNNHSLALTSCGELYSWGSNI 171

Query: 298 NFCLGHGEQHDELQ---PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGA 354
              LG     D      P  + T    GI +  ++ G  H   +  SG V+ WG+  CG 
Sbjct: 172 YGQLGVNSPKDLTHCNYPLRLTTLL--GIPLAAIACGGNHSFLISKSGAVFGWGRNNCGQ 229

Query: 355 LGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGV 414
           LG  DE ++  P  L +L++     V      +  L + G V+  G   +G LG    G 
Sbjct: 230 LGLNDEANRAYPTQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGAYGQLG---HGF 286

Query: 415 SDKVLRPRILDSLRAHHVSQISTGLYHTV-VVTDRGRLFGFGDNERAQLGHDTLRGCLEP 473
           S   + PR++  L    ++Q++ G  HT+ +V  RGR++ FG     QLG  + +  + P
Sbjct: 287 SSNEMLPRMVMELMGSTITQVACGNRHTLALVPSRGRVYAFGLGSSGQLGTRSTKSLMLP 346



 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 95/301 (31%), Positives = 139/301 (46%), Gaps = 15/301 (4%)

Query: 115 QITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
           Q+  G  HTL L +N  V++CGS+    LGH   T + +    +       V+Q+S    
Sbjct: 44  QVACGHRHTLFLTANGKVYACGSNDHSQLGHELPTKRPLLIPELQ---DYVVIQISCGSR 100

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
           H+  + + GQV + GDN     GH      +  P++V  L      Q+  G N +  LT 
Sbjct: 101 HSLALSEWGQVLSWGDNDCGQLGHATDKEIVQLPKVVRQLVSKTVVQIACGNNHSLALTS 160

Query: 234 RGHVHTCGSNTHGQLGHGDTLDRP---TPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 290
            G +++ GSN +GQLG     D      P  +  L  +  +  IA G ++   ++ +G V
Sbjct: 161 CGELYSWGSNIYGQLGVNSPKDLTHCNYPLRLTTLLGI-PLAAIACGGNHSFLISKSGAV 219

Query: 291 YSFGSGSNFC--LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 348
             FG G N C  LG  ++ +   P  ++T R  G+    V+ GDE  V L + G V+T G
Sbjct: 220 --FGWGRNNCGQLGLNDEANRAYPTQLKTLRTLGVRF--VACGDEFSVFLTNEGGVFTCG 275

Query: 349 KGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDT-GSVYGFGWMGFGSL 407
            G  G LGHG   ++ LP  +  L      QV    R T  LV + G VY FG    G L
Sbjct: 276 AGAYGQLGHGFSSNEMLPRMVMELMGSTITQVACGNRHTLALVPSRGRVYAFGLGSSGQL 335

Query: 408 G 408
           G
Sbjct: 336 G 336



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 76/245 (31%), Positives = 113/245 (46%), Gaps = 10/245 (4%)

Query: 236 HVHTCGSNTHGQLGHGDTLDRP--TPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
            ++  GS +HGQLG G   D    TP  I P     +V Q+A G  + L +T NG VY+ 
Sbjct: 6   ELYCWGSTSHGQLGLGGIEDEQILTPSQI-PWTPDTAVQQVACGHRHTLFLTANGKVYAC 64

Query: 294 GSGSNFCLGHGEQHDEL-QPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 352
           GS  +  LGH     EL   R +     +   V+++S G  H +AL   G V +WG   C
Sbjct: 65  GSNDHSQLGH-----ELPTKRPLLIPELQDYVVIQISCGSRHSLALSEWGQVLSWGDNDC 119

Query: 353 GALGHG-DEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 411
           G LGH  D+    LP+ +  L S   VQ+      +  L   G +Y +G   +G LG   
Sbjct: 120 GQLGHATDKEIVQLPKVVRQLVSKTVVQIACGNNHSLALTSCGELYSWGSNIYGQLGVNS 179

Query: 412 RGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCL 471
                    P  L +L    ++ I+ G  H+ +++  G +FG+G N   QLG +      
Sbjct: 180 PKDLTHCNYPLRLTTLLGIPLAAIACGGNHSFLISKSGAVFGWGRNNCGQLGLNDEANRA 239

Query: 472 EPTEI 476
            PT++
Sbjct: 240 YPTQL 244



 Score = 95.5 bits (236), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 76/261 (29%), Positives = 119/261 (45%), Gaps = 13/261 (4%)

Query: 114 MQITTGRYHTLLISN-SSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +QI+ G  H+L +S    V S G + CG LGH  +         +    +  VVQ++   
Sbjct: 93  IQISCGSRHSLALSEWGQVLSWGDNDCGQLGHATDKEIVQLPKVVRQLVSKTVVQIACGN 152

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRP-----IFRPRLVEALKGVPCKQVTAGLNF 227
           NH+  +   G++++ G N     G    N P        P  +  L G+P   +  G N 
Sbjct: 153 NHSLALTSCGELYSWGSN---IYGQLGVNSPKDLTHCNYPLRLTTLLGIPLAAIACGGNH 209

Query: 228 TGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN 287
           +  ++  G V   G N  GQLG  D  +R  P  +  L  +G V  +A G  + + +T  
Sbjct: 210 SFLISKSGAVFGWGRNNCGQLGLNDEANRAYPTQLKTLRTLG-VRFVACGDEFSVFLTNE 268

Query: 288 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL-DSSGYVYT 346
           G V++ G+G+   LGHG   +E+ PR +      G  + +V+ G+ H +AL  S G VY 
Sbjct: 269 GGVFTCGAGAYGQLGHGFSSNEMLPRMVMELM--GSTITQVACGNRHTLALVPSRGRVYA 326

Query: 347 WGKGYCGALGHGDEIDKTLPE 367
           +G G  G LG        LP+
Sbjct: 327 FGLGSSGQLGTRSTKSLMLPQ 347



 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 68/209 (32%), Positives = 106/209 (50%), Gaps = 12/209 (5%)

Query: 114 MQITTGRYHTL-LISNSSVFSCGSSLCGVLG-HGP-ETTQCVSFTRINFPSAAHVVQVSA 170
           +QI  G  H+L L S   ++S GS++ G LG + P + T C    R+       +  ++ 
Sbjct: 146 VQIACGNNHSLALTSCGELYSWGSNIYGQLGVNSPKDLTHCNYPLRLTTLLGIPLAAIAC 205

Query: 171 SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFR--PRLVEALKGVPCKQVTAGLNFT 228
             NH+  + +SG VF  G N+   CG    N    R  P  ++ L+ +  + V  G  F+
Sbjct: 206 GGNHSFLISKSGAVFGWGRNN---CGQLGLNDEANRAYPTQLKTLRTLGVRFVACGDEFS 262

Query: 229 GFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTG 286
            FLT  G V TCG+  +GQLGHG + +   P+ +  +E +GS + Q+A G  + LA V  
Sbjct: 263 VFLTNEGGVFTCGAGAYGQLGHGFSSNEMLPRMV--MELMGSTITQVACGNRHTLALVPS 320

Query: 287 NGVVYSFGSGSNFCLGHGEQHDELQPRAI 315
            G VY+FG GS+  LG       + P+ +
Sbjct: 321 RGRVYAFGLGSSGQLGTRSTKSLMLPQVV 349


>gi|255570334|ref|XP_002526126.1| Ran GTPase binding protein, putative [Ricinus communis]
 gi|223534503|gb|EEF36202.1| Ran GTPase binding protein, putative [Ricinus communis]
          Length = 1114

 Score =  134 bits (336), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 98/324 (30%), Positives = 156/324 (48%), Gaps = 23/324 (7%)

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
           HAA V + G+VFT G+ S    GH    + + +PRLVE+L       V  G   T  +T+
Sbjct: 291 HAALVTRQGEVFTWGEESGGRLGH-GVGKDVIQPRLVESLAVSTVDFVACGEFHTCAVTM 349

Query: 234 RGHVHTCGSNTH--GQLGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSYMLAVTGNGVV 290
            G ++T G  TH  G LGHG+ +    PK I+ PLE +  V  +  GP +   VT  G +
Sbjct: 350 AGEIYTWGDGTHNAGLLGHGNDVSHWIPKRISGPLEGL-QVASVTCGPWHTALVTSTGQL 408

Query: 291 YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL-----------D 339
           ++FG G+   LGHG++ +   PR +++    G+  +  + G  H  A+            
Sbjct: 409 FTFGDGTFGVLGHGDRENVAYPREVESL--SGLRTIAAACGVWHTAAVVEVIVTQSSSSI 466

Query: 340 SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGF 399
           SSG ++TWG G    LGHGD+  +  P  + +L  +   ++      T  L  +G V+  
Sbjct: 467 SSGKLFTWGDGDKNRLGHGDKEPRLKPTCVPALIDYNFHKIACGHSLTVGLTTSGHVFAM 526

Query: 400 GWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNER 459
           G   +G LG P    +D  L   + D L    V +I+ G YH  V+T R  ++ +G    
Sbjct: 527 GSTVYGQLGNP---YADGKLPCLVEDKLSGESVEEIACGAYHVAVLTSRNEVYTWGKGAN 583

Query: 460 AQLGHDTLRGCLEPTEIFIQEMEE 483
            +LGH  +     P  I ++ +++
Sbjct: 584 GRLGHGDIEDRKAP--ILVEALKD 605



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 84/282 (29%), Positives = 127/282 (45%), Gaps = 21/282 (7%)

Query: 116 ITTGRYHTLLISNSS---VFSCGSSLCGVLGHGPETTQCVSFTRINFP-SAAHVVQVSAS 171
           +  G +HT  ++ +     +  G+   G+LGHG + +  +   RI+ P     V  V+  
Sbjct: 337 VACGEFHTCAVTMAGEIYTWGDGTHNAGLLGHGNDVSHWIP-KRISGPLEGLQVASVTCG 395

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
             H A V  +GQ+FT GD +    GH D     + PR VE+L G+       G+  T  +
Sbjct: 396 PWHTALVTSTGQLFTFGDGTFGVLGHGDRENVAY-PREVESLSGLRTIAAACGVWHTAAV 454

Query: 232 T-----------IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 280
                         G + T G     +LGHGD   R  P  +  L +  +  +IA G S 
Sbjct: 455 VEVIVTQSSSSISSGKLFTWGDGDKNRLGHGDKEPRLKPTCVPALIDY-NFHKIACGHSL 513

Query: 281 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 340
            + +T +G V++ GS     LG+     +L P  ++  +  G  V  ++ G  HV  L S
Sbjct: 514 TVGLTTSGHVFAMGSTVYGQLGNPYADGKL-PCLVED-KLSGESVEEIACGAYHVAVLTS 571

Query: 341 SGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKS-HLAVQVC 381
              VYTWGKG  G LGHGD  D+  P  + +LK  H+    C
Sbjct: 572 RNEVYTWGKGANGRLGHGDIEDRKAPILVEALKDRHVKYIAC 613



 Score = 88.6 bits (218), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 88/347 (25%), Positives = 149/347 (42%), Gaps = 36/347 (10%)

Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHVVQVSASE 172
           R+  L+     VF+ G    G LGHG       P   + ++ + ++F        V+  E
Sbjct: 290 RHAALVTRQGEVFTWGEESGGRLGHGVGKDVIQPRLVESLAVSTVDF--------VACGE 341

Query: 173 NHAAFVLQSGQVFTCGD--NSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
            H   V  +G+++T GD  +++   GH +        R+   L+G+    VT G   T  
Sbjct: 342 FHTCAVTMAGEIYTWGDGTHNAGLLGHGNDVSHWIPKRISGPLEGLQVASVTCGPWHTAL 401

Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT----- 285
           +T  G + T G  T G LGHGD  +   P+ +  L  + ++   A G  +  AV      
Sbjct: 402 VTSTGQLFTFGDGTFGVLGHGDRENVAYPREVESLSGLRTIA-AACGVWHTAAVVEVIVT 460

Query: 286 ------GNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 339
                  +G ++++G G    LGHG++   L+P  +        H  +++ G    V L 
Sbjct: 461 QSSSSISSGKLFTWGDGDKNRLGHGDKEPRLKPTCVPALIDYNFH--KIACGHSLTVGLT 518

Query: 340 SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAV-QVCARKRKTFVLVDTGSVYG 398
           +SG+V+  G    G LG+    D  LP  +    S  +V ++        VL     VY 
Sbjct: 519 TSGHVFAMGSTVYGQLGN-PYADGKLPCLVEDKLSGESVEEIACGAYHVAVLTSRNEVYT 577

Query: 399 FGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVV 445
           +G    G LG  D  + D+   P ++++L+  HV  I+ G  +T  +
Sbjct: 578 WGKGANGRLGHGD--IEDRKA-PILVEALKDRHVKYIACGANYTAAI 621



 Score = 88.2 bits (217), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 83/300 (27%), Positives = 139/300 (46%), Gaps = 21/300 (7%)

Query: 200 TNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTP 259
           T   +  PR +E+   +    +  G+     +T +G V T G  + G+LGHG   D   P
Sbjct: 264 TRADVLLPRPLESNVVLDVHHIACGVRHAALVTRQGEVFTWGEESGGRLGHGVGKDVIQP 323

Query: 260 KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC--LGHGEQHDELQPRAIQT 317
           + +  L  V +V  +A G  +  AVT  G +Y++G G++    LGHG       P+ I +
Sbjct: 324 RLVESL-AVSTVDFVACGEFHTCAVTMAGEIYTWGDGTHNAGLLGHGNDVSHWIPKRI-S 381

Query: 318 FRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP---EPLSSLKS 374
              +G+ V  V+ G  H   + S+G ++T+G G  G LGHGD  +   P   E LS L++
Sbjct: 382 GPLEGLQVASVTCGPWHTALVTSTGQLFTFGDGTFGVLGHGDRENVAYPREVESLSGLRT 441

Query: 375 --------HLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDS 426
                   H A  V     ++   + +G ++ +G      LG  D+   +  L+P  + +
Sbjct: 442 IAAACGVWHTAAVVEVIVTQSSSSISSGKLFTWGDGDKNRLGHGDK---EPRLKPTCVPA 498

Query: 427 LRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG---CLEPTEIFIQEMEE 483
           L  ++  +I+ G   TV +T  G +F  G     QLG+    G   CL   ++  + +EE
Sbjct: 499 LIDYNFHKIACGHSLTVGLTTSGHVFAMGSTVYGQLGNPYADGKLPCLVEDKLSGESVEE 558



 Score = 82.4 bits (202), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 69/236 (29%), Positives = 110/236 (46%), Gaps = 19/236 (8%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSASEN 173
           +T G +HT L++++  +F+ G    GVLGHG    + V++ R +   S    +  +    
Sbjct: 392 VTCGPWHTALVTSTGQLFTFGDGTFGVLGHGDR--ENVAYPREVESLSGLRTIAAACGVW 449

Query: 174 HAAFVLQ-----------SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 222
           H A V++           SG++FT GD      GH D   P  +P  V AL      ++ 
Sbjct: 450 HTAAVVEVIVTQSSSSISSGKLFTWGDGDKNRLGHGD-KEPRLKPTCVPALIDYNFHKIA 508

Query: 223 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 282
            G + T  LT  GHV   GS  +GQLG+    D   P  +       SV +IA G  ++ 
Sbjct: 509 CGHSLTVGLTTSGHVFAMGSTVYGQLGN-PYADGKLPCLVEDKLSGESVEEIACGAYHVA 567

Query: 283 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
            +T    VY++G G+N  LGHG+  D   P  ++  + +  HV  ++ G  +  A+
Sbjct: 568 VLTSRNEVYTWGKGANGRLGHGDIEDRKAPILVEALKDR--HVKYIACGANYTAAI 621


>gi|301121999|ref|XP_002908726.1| conserved hypothetical protein [Phytophthora infestans T30-4]
 gi|262099488|gb|EEY57540.1| conserved hypothetical protein [Phytophthora infestans T30-4]
          Length = 2298

 Score =  134 bits (336), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 102/350 (29%), Positives = 152/350 (43%), Gaps = 25/350 (7%)

Query: 131 VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDN 190
           V+SCG +  G LGHG +T    SF RI       ++Q+ A   H   +   G+VFTCG N
Sbjct: 375 VWSCGQNSYGELGHG-DTASRKSFERIQALQQKEIIQIGAGNEHTVVLTADGKVFTCGYN 433

Query: 191 SSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGH 250
            +  CG   T R      + +   G        G   T  ++  G V TCG N  GQLGH
Sbjct: 434 DNGQCGQGGTARVSHLSEIPKMDSGSSQAHAYNGCEHTILVSTDGRVATCGYNYRGQLGH 493

Query: 251 GDTLDRPTPKSIAPLEEVGSVVQIAAGPSY--MLAVTGNGV--VYSFGSGSNFCLGHGEQ 306
           G+T     PK I  LE    +V++ +   Y  +LA     +  +Y+FG      LGH + 
Sbjct: 494 GNTTSESVPKIIRSLE--NKIVRLVSCSYYHTVLACEDGNLQNLYTFGRNDYGQLGHNDS 551

Query: 307 HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP 366
            D   P+ ++    +   +V V+ G  H + +  SG  + +GK   G LG     ++  P
Sbjct: 552 IDRKIPQFVEALSDQ--QIVSVACGQYHTMVVTVSGKAFAFGKNDYGQLGIDTMENQLAP 609

Query: 367 EPLSSLKSHLAVQVCARKR----KTFVLVDTGSVYGFGWMGFGSLGFPDRGVS------- 415
                ++  L  Q C   R     T  L     ++ FG   +G LG      S       
Sbjct: 610 ---VQVRGGLERQECLEIRCGYYHTIALCSGAHLFAFGRNDYGQLGLGRSNASSTSNLQL 666

Query: 416 --DKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 463
              +    R++D L    + +I+ G YHT+ V+D G ++ FG N   QLG
Sbjct: 667 QQQRFSNARLIDELEGKDIVRIACGCYHTIAVSDNGVMYVFGRNNHGQLG 716



 Score =  118 bits (295), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 76/248 (30%), Positives = 125/248 (50%), Gaps = 16/248 (6%)

Query: 236 HVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 295
            V +CG N++G+LGHGDT  R + + I  L++   ++QI AG  + + +T +G V++ G 
Sbjct: 374 EVWSCGQNSYGELGHGDTASRKSFERIQALQQ-KEIIQIGAGNEHTVVLTADGKVFTCGY 432

Query: 296 GSNFCLGHG----EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 351
             N   G G      H    P+        G        G EH + + + G V T G  Y
Sbjct: 433 NDNGQCGQGGTARVSHLSEIPKM-----DSGSSQAHAYNGCEHTILVSTDGRVATCGYNY 487

Query: 352 CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSV---YGFGWMGFGSLG 408
            G LGHG+   +++P+ + SL++ +   V      T +  + G++   Y FG   +G LG
Sbjct: 488 RGQLGHGNTTSESVPKIIRSLENKIVRLVSCSYYHTVLACEDGNLQNLYTFGRNDYGQLG 547

Query: 409 FPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLR 468
             D  +  K+  P+ +++L    +  ++ G YHT+VVT  G+ F FG N+  QLG DT+ 
Sbjct: 548 HND-SIDRKI--PQFVEALSDQQIVSVACGQYHTMVVTVSGKAFAFGKNDYGQLGIDTME 604

Query: 469 GCLEPTEI 476
             L P ++
Sbjct: 605 NQLAPVQV 612



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 86/285 (30%), Positives = 130/285 (45%), Gaps = 10/285 (3%)

Query: 183 QVFTCGDNSSFCCGHRDT-NRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCG 241
           +V++CG NS    GH DT +R  F    ++AL+     Q+ AG   T  LT  G V TCG
Sbjct: 374 EVWSCGQNSYGELGHGDTASRKSFER--IQALQQKEIIQIGAGNEHTVVLTADGKVFTCG 431

Query: 242 SNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCL 301
            N +GQ G G T        I  ++   S      G  + + V+ +G V + G      L
Sbjct: 432 YNDNGQCGQGGTARVSHLSEIPKMDSGSSQAHAYNGCEHTILVSTDGRVATCGYNYRGQL 491

Query: 302 GHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG---YVYTWGKGYCGALGHG 358
           GHG    E  P+ I++   K + +  VS    H V     G    +YT+G+   G LGH 
Sbjct: 492 GHGNTTSESVPKIIRSLENKIVRL--VSCSYYHTVLACEDGNLQNLYTFGRNDYGQLGHN 549

Query: 359 DEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKV 418
           D ID+ +P+ + +L     V V   +  T V+  +G  + FG   +G LG     + +++
Sbjct: 550 DSIDRKIPQFVEALSDQQIVSVACGQYHTMVVTVSGKAFAFGKNDYGQLGID--TMENQL 607

Query: 419 LRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 463
              ++   L      +I  G YHT+ +     LF FG N+  QLG
Sbjct: 608 APVQVRGGLERQECLEIRCGYYHTIALCSGAHLFAFGRNDYGQLG 652



 Score = 94.7 bits (234), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 90/353 (25%), Positives = 152/353 (43%), Gaps = 30/353 (8%)

Query: 114 MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRI-NFPSAAHVVQVSAS 171
           +QI  G  HT+ L ++  VF+CG +  G  G G  T +    + I    S +        
Sbjct: 409 IQIGAGNEHTVVLTADGKVFTCGYNDNGQCGQGG-TARVSHLSEIPKMDSGSSQAHAYNG 467

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
             H   V   G+V TCG N     GH +T      P+++ +L+    + V+     T   
Sbjct: 468 CEHTILVSTDGRVATCGYNYRGQLGHGNTTSESV-PKIIRSLENKIVRLVSCSYYHTVLA 526

Query: 232 TIRGHV---HTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG 288
              G++   +T G N +GQLGH D++DR  P+ +  L +   +V +A G  + + VT +G
Sbjct: 527 CEDGNLQNLYTFGRNDYGQLGHNDSIDRKIPQFVEALSD-QQIVSVACGQYHTMVVTVSG 585

Query: 289 VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH---VVRVSAGDEHVVALDSSGYVY 345
             ++FG      LG     ++L P  +    R G+     + +  G  H +AL S  +++
Sbjct: 586 KAFAFGKNDYGQLGIDTMENQLAPVQV----RGGLERQECLEIRCGYYHTIALCSGAHLF 641

Query: 346 TWGKGYCGALGHGDEIDKTL------------PEPLSSLKSHLAVQVCARKRKTFVLVDT 393
            +G+   G LG G     +                +  L+    V++      T  + D 
Sbjct: 642 AFGRNDYGQLGLGRSNASSTSNLQLQQQRFSNARLIDELEGKDIVRIACGCYHTIAVSDN 701

Query: 394 GSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT 446
           G +Y FG    G LG  D   + + + P  +D      ++ ++ G YHTVV+T
Sbjct: 702 GVMYVFGRNNHGQLGTGD---TTERVYPFPIDDFVGKRIALVAAGFYHTVVLT 751



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 86/309 (27%), Positives = 136/309 (44%), Gaps = 22/309 (7%)

Query: 100 VEHSSDIVETSAGNMQI--TTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTR 156
           V H S+I +  +G+ Q     G  HT+L+S +  V +CG +  G LGHG  T++ V   +
Sbjct: 446 VSHLSEIPKMDSGSSQAHAYNGCEHTILVSTDGRVATCGYNYRGQLGHGNTTSESVP--K 503

Query: 157 INFPSAAHVVQ-VSASENHAAFVLQSGQV---FTCGDNSSFCCGHRDT-NRPIFRPRLVE 211
           I       +V+ VS S  H     + G +   +T G N     GH D+ +R I  P+ VE
Sbjct: 504 IIRSLENKIVRLVSCSYYHTVLACEDGNLQNLYTFGRNDYGQLGHNDSIDRKI--PQFVE 561

Query: 212 ALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSV 271
           AL       V  G   T  +T+ G     G N +GQLG     ++  P  +    E    
Sbjct: 562 ALSDQQIVSVACGQYHTMVVTVSGKAFAFGKNDYGQLGIDTMENQLAPVQVRGGLERQEC 621

Query: 272 VQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHD------ELQPRAIQTFRR----K 321
           ++I  G  + +A+     +++FG      LG G  +       +LQ +     R     +
Sbjct: 622 LEIRCGYYHTIALCSGAHLFAFGRNDYGQLGLGRSNASSTSNLQLQQQRFSNARLIDELE 681

Query: 322 GIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVC 381
           G  +VR++ G  H +A+  +G +Y +G+   G LG GD  ++  P P+          V 
Sbjct: 682 GKDIVRIACGCYHTIAVSDNGVMYVFGRNNHGQLGTGDTTERVYPFPIDDFVGKRIALVA 741

Query: 382 ARKRKTFVL 390
           A    T VL
Sbjct: 742 AGFYHTVVL 750


>gi|224105957|ref|XP_002313993.1| predicted protein [Populus trichocarpa]
 gi|222850401|gb|EEE87948.1| predicted protein [Populus trichocarpa]
          Length = 1104

 Score =  134 bits (336), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 96/315 (30%), Positives = 154/315 (48%), Gaps = 22/315 (6%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V  ++    HAA V + G++F+ G+ S    GH   +  +  P+L++AL     + V  G
Sbjct: 312 VQNIACGGQHAALVTKQGEIFSWGEESGGRLGH-GVDSDVMHPKLIDALSNTNIELVACG 370

Query: 225 LNFTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSI-APLEEVGSVVQIAAGPSYM 281
              T  +T+ G ++T G  T+  G LGHG+ +    PK +  PLE +  V  I+ GP + 
Sbjct: 371 EYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGI-HVSSISCGPWHT 429

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL--- 338
             VT  G +++FG G+   LGHG++     P+ +++   KG+  V+ + G  H  A+   
Sbjct: 430 AVVTSAGQLFTFGDGTFGVLGHGDRKSISLPKEVESL--KGLRTVQAACGVWHTAAVIEV 487

Query: 339 ---------DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFV 389
                     SSG ++TWG G  G LGHGD+  K +P  +++L      QV      T  
Sbjct: 488 MVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCQVACGHSLTVA 547

Query: 390 LVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRG 449
              +G VY  G   +G LG P   ++D  L  R+   L    V +I+ G YH  V+T + 
Sbjct: 548 RTTSGHVYTMGSPVYGQLGNP---LADGKLPTRVEGKLSKSFVEEIACGAYHVAVLTSKT 604

Query: 450 RLFGFGDNERAQLGH 464
            ++ +G     +LGH
Sbjct: 605 EVYTWGKGANGRLGH 619



 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 97/291 (33%), Positives = 134/291 (46%), Gaps = 22/291 (7%)

Query: 100 VEHSSDIVETSAGNMQITT-GRYHTLLISNSS---VFSCGSSLCGVLGHGPETTQCVSFT 155
           V H   I   S  N+++   G YHT  ++ S     +  G+   G+LGHG E +  V   
Sbjct: 350 VMHPKLIDALSNTNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVP-K 408

Query: 156 RINFP-SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALK 214
           R+N P    HV  +S    H A V  +GQ+FT GD +    GH D  + I  P+ VE+LK
Sbjct: 409 RVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGD-RKSISLPKEVESLK 467

Query: 215 GVPCKQVTAGLNFTGFL------------TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSI 262
           G+   Q   G+  T  +               G + T G    G+LGHGD   +  P  +
Sbjct: 468 GLRTVQAACGVWHTAAVIEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCV 527

Query: 263 APLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKG 322
           A L E  +  Q+A G S  +A T +G VY+ GS     LG+     +L  R      +  
Sbjct: 528 AALVEP-NFCQVACGHSLTVARTTSGHVYTMGSPVYGQLGNPLADGKLPTRVEGKLSKS- 585

Query: 323 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
             V  ++ G  HV  L S   VYTWGKG  G LGHGD  D+  P  + +LK
Sbjct: 586 -FVEEIACGAYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALK 635



 Score = 95.5 bits (236), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 83/296 (28%), Positives = 137/296 (46%), Gaps = 27/296 (9%)

Query: 207 PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 266
           P+ +E+   +  + +  G      +T +G + + G  + G+LGHG   D   PK I  L 
Sbjct: 301 PKALESAVVLDVQNIACGGQHAALVTKQGEIFSWGEESGGRLGHGVDSDVMHPKLIDALS 360

Query: 267 EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS-NF-CLGHGEQHDELQPRAIQTFRRKGIH 324
              ++  +A G  +  AVT +G +Y++G G+ NF  LGHG +     P+ +     +GIH
Sbjct: 361 NT-NIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNG-PLEGIH 418

Query: 325 VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARK 384
           V  +S G  H   + S+G ++T+G G  G LGHGD    +LP+ + SLK    VQ     
Sbjct: 419 VSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSISLPKEVESLKGLRTVQAACGV 478

Query: 385 RKTFVLVDT------------GSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHV 432
             T  +++             G ++ +G    G LG  D+   +  L P  + +L   + 
Sbjct: 479 WHTAAVIEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDK---EAKLVPTCVAALVEPNF 535

Query: 433 SQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI-------FIQEM 481
            Q++ G   TV  T  G ++  G     QLG+    G L PT +       F++E+
Sbjct: 536 CQVACGHSLTVARTTSGHVYTMGSPVYGQLGNPLADGKL-PTRVEGKLSKSFVEEI 590



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 65/225 (28%), Positives = 102/225 (45%), Gaps = 18/225 (8%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSASEN 173
           I+ G +HT +++++  +F+ G    GVLGHG    + +S  + +        VQ +    
Sbjct: 422 ISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDR--KSISLPKEVESLKGLRTVQAACGVW 479

Query: 174 HAAFVLQ------------SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQV 221
           H A V++            SG++FT GD      GH D    +  P  V AL      QV
Sbjct: 480 HTAAVIEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLV-PTCVAALVEPNFCQV 538

Query: 222 TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 281
             G + T   T  GHV+T GS  +GQLG+    D   P  +        V +IA G  ++
Sbjct: 539 ACGHSLTVARTTSGHVYTMGSPVYGQLGN-PLADGKLPTRVEGKLSKSFVEEIACGAYHV 597

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVV 326
             +T    VY++G G+N  LGHG+  D   P  ++  + K +  +
Sbjct: 598 AVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSI 642



 Score = 50.8 bits (120), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 51/195 (26%), Positives = 89/195 (45%), Gaps = 12/195 (6%)

Query: 94  LRFLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVS 153
           L+ L++V+ +  +  T+A  +++  G   +   S+  +F+ G    G LGHG +  + V 
Sbjct: 466 LKGLRTVQAACGVWHTAA-VIEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVP 524

Query: 154 FTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEAL 213
            T +      +  QV+   +       SG V+T G       G+     P+   +L   +
Sbjct: 525 -TCVAALVEPNFCQVACGHSLTVARTTSGHVYTMGSPVYGQLGN-----PLADGKLPTRV 578

Query: 214 KGVPCK----QVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG 269
           +G   K    ++  G      LT +  V+T G   +G+LGHGDT DR +P  +  L++  
Sbjct: 579 EGKLSKSFVEEIACGAYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKD-K 637

Query: 270 SVVQIAAGPSYMLAV 284
            V  IA G S+  A+
Sbjct: 638 QVKSIACGTSFTAAI 652


>gi|449673459|ref|XP_002164132.2| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Hydra
           magnipapillata]
          Length = 2284

 Score =  134 bits (336), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 97/330 (29%), Positives = 168/330 (50%), Gaps = 24/330 (7%)

Query: 156 RINFPSAAHVVQVSASENHAAFVLQS--GQVFTCGDNSS------FCCGHRDTNR----- 202
           +IN     H++ +  ++N    + +S   ++ T  +NS+      F  G  D ++     
Sbjct: 516 KINPDFQKHILSMFYTQNRKLSISESKDDELCTLWENSTNKQVDVFMWGLNDKDQLGGLK 575

Query: 203 --PIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGD-TLDRPTP 259
              +  P L + L  + CK +  G   T F+T +G +++CG ++ G+LG GD T +  +P
Sbjct: 576 GSKVKSPTLCDHLSSLQCKFIAGGSKSTFFITNKGKLYSCGESSFGKLGIGDITGNVTSP 635

Query: 260 KSIAPLEE-VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTF 318
           + +  L + + + V + +G ++++A+T +G+ +S+G G N  LGHG      +P  I+ F
Sbjct: 636 RLVTGLNQLIVTKVSVHSGGNHVMALTSDGLAFSWGDGENGQLGHGNLMSCSKPHLIEAF 695

Query: 319 RRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAV 378
              G  V  +S G  H  A+  + Y+YTWG G  G LGHGDE     P+ ++    +  V
Sbjct: 696 V--GKIVTDISCGSAHSAAIVENKYLYTWGLGDFGRLGHGDEETILQPKFVTHFLGYNVV 753

Query: 379 QVC--ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS 436
           QV   +R  +T  + D   V+ +G   FG LG   RG S++ L P  ++ LR   + +I 
Sbjct: 754 QVSCGSRDAQTVCITDDDKVWSWGDGDFGKLG---RGGSERCLIPVEVEQLRGLQICKIL 810

Query: 437 TGLYHTVVVTDRGRLFGFGDNERAQLGHDT 466
            G   TV +T  G ++ +G  +  +LGH T
Sbjct: 811 CGAQFTVALTKTGTVWTWGKGDFYRLGHGT 840



 Score =  132 bits (331), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 92/292 (31%), Positives = 144/292 (49%), Gaps = 12/292 (4%)

Query: 177 FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT--AGLNFTGFLTIR 234
           F+   G++++CG++S    G  D    +  PRLV  L  +   +V+  +G N    LT  
Sbjct: 605 FITNKGKLYSCGESSFGKLGIGDITGNVTSPRLVTGLNQLIVTKVSVHSGGNHVMALTSD 664

Query: 235 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLAVTGNGVVYSF 293
           G   + G   +GQLGHG+ +    P  I     VG +V  I+ G ++  A+  N  +Y++
Sbjct: 665 GLAFSWGDGENGQLGHGNLMSCSKPHLIEAF--VGKIVTDISCGSAHSAAIVENKYLYTW 722

Query: 294 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEHVVALDSSGYVYTWGKGY 351
           G G    LGHG++   LQP+ +  F   G +VV+VS G  D   V +     V++WG G 
Sbjct: 723 GLGDFGRLGHGDEETILQPKFVTHFL--GYNVVQVSCGSRDAQTVCITDDDKVWSWGDGD 780

Query: 352 CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 411
            G LG G      +P  +  L+     ++    + T  L  TG+V+ +G   F  LG   
Sbjct: 781 FGKLGRGGSERCLIPVEVEQLRGLQICKILCGAQFTVALTKTGTVWTWGKGDFYRLG--- 837

Query: 412 RGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 463
            G    V +P++++ LR  HV  I+ G  H + VT  G +F +GDN+  QLG
Sbjct: 838 HGTDIHVRQPKLVEGLRGKHVIDIAVGALHCLAVTQDGEVFSWGDNDHGQLG 889



 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 86/290 (29%), Positives = 141/290 (48%), Gaps = 11/290 (3%)

Query: 188  GDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT--AGLNFTGFLTIRGHVHTCGSNTH 245
            G+N     G+ +T   +  PRL+E++K +  K+++  +G      L+  G V + G    
Sbjct: 1502 GNNGQLGLGYSET---VTSPRLLESIKHINIKKISVHSGGRHCLALSSDGEVFSWGEGED 1558

Query: 246  GQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHG 304
            G+LGHG+      PK I      G ++  I AG S+  A+  NG +Y++G G    LGHG
Sbjct: 1559 GKLGHGNRQTSSQPKRIEFF--CGKIITNICAGGSHSAAIGLNGELYTWGKGRYGRLGHG 1616

Query: 305  EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKT 364
            +  D+L+P+ ++  +   +  V   +GD   + + +   V++WG G  G LG G      
Sbjct: 1617 DSDDQLKPKQVEALQFFFVLDVACGSGDAQTLCITNDDNVWSWGDGDYGKLGRGGSDGCK 1676

Query: 365  LPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRIL 424
            +P  +  L     V+V    + +  L   G +Y +G   +  LG    G  + V RP ++
Sbjct: 1677 VPMIIEDLSGKGIVKVECGSQFSMALTKYGVLYTWGKGDYYRLG---HGTEEHVRRPMMV 1733

Query: 425  DSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPT 474
             +L    V+ IS G  H VV TD G ++ +GDN+  QLG  T+     PT
Sbjct: 1734 TALFNKIVTSISCGSLHCVVCTDEGEVYCWGDNDEGQLGDGTIIARQTPT 1783



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 91/338 (26%), Positives = 149/338 (44%), Gaps = 14/338 (4%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE-- 172
           I  G   T  I+N   ++SCG S  G LG G  T    S   +   +   V +VS     
Sbjct: 596 IAGGSKSTFFITNKGKLYSCGESSFGKLGIGDITGNVTSPRLVTGLNQLIVTKVSVHSGG 655

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
           NH   +   G  F+ GD  +   GH +      +P L+EA  G     ++ G   +  + 
Sbjct: 656 NHVMALTSDGLAFSWGDGENGQLGHGNL-MSCSKPHLIEAFVGKIVTDISCGSAHSAAIV 714

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG-SVVQIAAGP--SYMLAVTGNGV 289
              +++T G    G+LGHGD      PK +     +G +VVQ++ G   +  + +T +  
Sbjct: 715 ENKYLYTWGLGDFGRLGHGDEETILQPKFVTHF--LGYNVVQVSCGSRDAQTVCITDDDK 772

Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 349
           V+S+G G    LG G     L P  ++  R  G+ + ++  G +  VAL  +G V+TWGK
Sbjct: 773 VWSWGDGDFGKLGRGGSERCLIPVEVEQLR--GLQICKILCGAQFTVALTKTGTVWTWGK 830

Query: 350 GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGF 409
           G    LGHG +I    P+ +  L+    + +         +   G V+ +G    G LG 
Sbjct: 831 GDFYRLGHGTDIHVRQPKLVEGLRGKHVIDIAVGALHCLAVTQDGEVFSWGDNDHGQLG- 889

Query: 410 PDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTD 447
              G +D    P ++  L  H +  ++ G  H++  T+
Sbjct: 890 --TGETDVKKVPNLITGLHNHRIKYVACGSSHSIAWTE 925



 Score = 96.7 bits (239), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 81/275 (29%), Positives = 124/275 (45%), Gaps = 14/275 (5%)

Query: 95   RFLQSVEHSSDIVETSAGNMQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVS 153
            R L+S++H       +   + + +G  H L L S+  VFS G    G LGHG   T    
Sbjct: 1519 RLLESIKH------INIKKISVHSGGRHCLALSSDGEVFSWGEGEDGKLGHGNRQTSSQP 1572

Query: 154  FTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEAL 213
              RI F     +  + A  +H+A +  +G+++T G       GH D++  + +P+ VEAL
Sbjct: 1573 -KRIEFFCGKIITNICAGGSHSAAIGLNGELYTWGKGRYGRLGHGDSDDQL-KPKQVEAL 1630

Query: 214  KGVPCKQVTAGLNFTGFLTIRG--HVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSV 271
            +      V  G      L I    +V + G   +G+LG G +     P  I  L   G +
Sbjct: 1631 QFFFVLDVACGSGDAQTLCITNDDNVWSWGDGDYGKLGRGGSDGCKVPMIIEDLSGKG-I 1689

Query: 272  VQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG 331
            V++  G  + +A+T  GV+Y++G G  + LGHG +    +P  +     K   V  +S G
Sbjct: 1690 VKVECGSQFSMALTKYGVLYTWGKGDYYRLGHGTEEHVRRPMMVTALFNK--IVTSISCG 1747

Query: 332  DEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP 366
              H V     G VY WG    G LG G  I +  P
Sbjct: 1748 SLHCVVCTDEGEVYCWGDNDEGQLGDGTIIARQTP 1782



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 58/206 (28%), Positives = 97/206 (47%), Gaps = 6/206 (2%)

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDEL-QPRAIQTFRRKGIHVVRVSAGD 332
           IA G      +T  G +YS G  S   LG G+    +  PR +    +  +  V V +G 
Sbjct: 596 IAGGSKSTFFITNKGKLYSCGESSFGKLGIGDITGNVTSPRLVTGLNQLIVTKVSVHSGG 655

Query: 333 EHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVD 392
            HV+AL S G  ++WG G  G LGHG+ +  + P  + +    +   +      +  +V+
Sbjct: 656 NHVMALTSDGLAFSWGDGENGQLGHGNLMSCSKPHLIEAFVGKIVTDISCGSAHSAAIVE 715

Query: 393 TGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLY--HTVVVTDRGR 450
              +Y +G   FG LG    G  + +L+P+ +     ++V Q+S G     TV +TD  +
Sbjct: 716 NKYLYTWGLGDFGRLG---HGDEETILQPKFVTHFLGYNVVQVSCGSRDAQTVCITDDDK 772

Query: 451 LFGFGDNERAQLGHDTLRGCLEPTEI 476
           ++ +GD +  +LG      CL P E+
Sbjct: 773 VWSWGDGDFGKLGRGGSERCLIPVEV 798



 Score = 85.5 bits (210), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 54/194 (27%), Positives = 96/194 (49%), Gaps = 5/194 (2%)

Query: 285  TGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
            T   +V++ G G+N  LG G       PR +++ +   I  + V +G  H +AL S G V
Sbjct: 1491 TDGALVFATGYGNNGQLGLGYSETVTSPRLLESIKHINIKKISVHSGGRHCLALSSDGEV 1550

Query: 345  YTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGF 404
            ++WG+G  G LGHG+    + P+ +      +   +CA    +  +   G +Y +G   +
Sbjct: 1551 FSWGEGEDGKLGHGNRQTSSQPKRIEFFCGKIITNICAGGSHSAAIGLNGELYTWGKGRY 1610

Query: 405  GSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDNERAQL 462
            G LG    G SD  L+P+ +++L+   V  ++  +G   T+ +T+   ++ +GD +  +L
Sbjct: 1611 GRLG---HGDSDDQLKPKQVEALQFFFVLDVACGSGDAQTLCITNDDNVWSWGDGDYGKL 1667

Query: 463  GHDTLRGCLEPTEI 476
            G     GC  P  I
Sbjct: 1668 GRGGSDGCKVPMII 1681



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 46/148 (31%), Positives = 69/148 (46%), Gaps = 12/148 (8%)

Query: 344 VYTWG---KGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 400
           V+ WG   K   G L        TL + LSSL+      +    + TF + + G +Y  G
Sbjct: 560 VFMWGLNDKDQLGGLKGSKVKSPTLCDHLSSLQCKF---IAGGSKSTFFITNKGKLYSCG 616

Query: 401 WMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDNE 458
              FG LG  D  ++  V  PR++  L    V+++S  +G  H + +T  G  F +GD E
Sbjct: 617 ESSFGKLGIGD--ITGNVTSPRLVTGLNQLIVTKVSVHSGGNHVMALTSDGLAFSWGDGE 674

Query: 459 RAQLGHDTLRGCLEP--TEIFIQEMEED 484
             QLGH  L  C +P   E F+ ++  D
Sbjct: 675 NGQLGHGNLMSCSKPHLIEAFVGKIVTD 702



 Score = 42.4 bits (98), Expect = 0.59,   Method: Compositional matrix adjust.
 Identities = 49/194 (25%), Positives = 81/194 (41%), Gaps = 15/194 (7%)

Query: 289  VVYSFGSGSNFCLGHGEQH--DELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG-YVY 345
            V   F    +FCL     H   E+  + I    ++  H V++   D   V + + G  V+
Sbjct: 1443 VFEDFEKNLDFCLARVNGHFSAEMCVKLIDNLLKE--HNVKI---DCDTVCITTDGALVF 1497

Query: 346  TWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQ---VCARKRKTFVLVDTGSVYGFGWM 402
              G G  G LG G     T P  L S+K H+ ++   V +  R    L   G V+ +G  
Sbjct: 1498 ATGYGNNGQLGLGYSETVTSPRLLESIK-HINIKKISVHSGGRHCLALSSDGEVFSWGEG 1556

Query: 403  GFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQL 462
              G LG  +R  S    +P+ ++      ++ I  G  H+  +   G L+ +G     +L
Sbjct: 1557 EDGKLGHGNRQTSS---QPKRIEFFCGKIITNICAGGSHSAAIGLNGELYTWGKGRYGRL 1613

Query: 463  GHDTLRGCLEPTEI 476
            GH      L+P ++
Sbjct: 1614 GHGDSDDQLKPKQV 1627


>gi|426231463|ref|XP_004009758.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 [Ovis aries]
          Length = 1050

 Score =  134 bits (336), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 96/301 (31%), Positives = 148/301 (49%), Gaps = 29/301 (9%)

Query: 193 FCCGHRDTNRP---------IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 243
            C G+    +P         +  P++   +     K+V  G N + FL   G V+TCG+N
Sbjct: 2   LCWGYWSLGQPGISPNLQGVVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGAN 61

Query: 244 THGQLGHGDTLDRPTPKSIAPLEEVGS-----VVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
           T GQLGH    ++P        E++G+     +V +A G S+ LA++  G ++S+G+GS+
Sbjct: 62  TKGQLGHEREGNKP--------EQIGALADQHIVHVACGESHSLALSDQGQLFSWGAGSD 113

Query: 299 FCLGHGEQHDELQ-PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 357
             LG     D +  PR IQ   ++ I  ++VS G+ H +AL + G  +TWG+   G LG 
Sbjct: 114 GQLGLMTTEDSVAVPRLIQKLNQQTI--LQVSCGNWHCLALAADGQFFTWGRNSHGQLGL 171

Query: 358 GDEI-DKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSD 416
           G E   +  P+ + SL+     QV A    +F L  +G+V+G+G    G LG  D    +
Sbjct: 172 GKEFPSQASPQRVRSLEGIPLAQVVAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRE 231

Query: 417 KVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 476
               P  +  LR   V  IS G  HT V+T  G +F FG     QLGHD++   + P  +
Sbjct: 232 S---PCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRV 288

Query: 477 F 477
            
Sbjct: 289 L 289



 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 97/309 (31%), Positives = 158/309 (51%), Gaps = 14/309 (4%)

Query: 159 FPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVP 217
           F S   V +V+   NH+ F+L+ G+V+TCG N+    GH R+ N+P      + AL    
Sbjct: 30  FISDRSVKEVACGGNHSVFLLEDGEVYTCGANTKGQLGHEREGNKP----EQIGALADQH 85

Query: 218 CKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDR-PTPKSIAPLEEVGSVVQIAA 276
              V  G + +  L+ +G + + G+ + GQLG   T D    P+ I  L +  +++Q++ 
Sbjct: 86  IVHVACGESHSLALSDQGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQ-QTILQVSC 144

Query: 277 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH-DELQPRAIQTFRRKGIHVVRVSAGDEHV 335
           G  + LA+  +G  +++G  S+  LG G++   +  P+ +++   +GI + +V AG  H 
Sbjct: 145 GNWHCLALAADGQFFTWGRNSHGQLGLGKEFPSQASPQRVRSL--EGIPLAQVVAGGAHS 202

Query: 336 VALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGS 395
            AL  SG V+ WG    G LG  DE D+  P  +  L++   V +   +  T VL  +G 
Sbjct: 203 FALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGG 262

Query: 396 VYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV-VTDRGRLFGF 454
           V+ FG    G LG     ++D+V  PR +  L    V+QI+ G  HT+  V   G ++ F
Sbjct: 263 VFTFGAGSCGQLG--HDSMNDEV-NPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAF 319

Query: 455 GDNERAQLG 463
           G   R QLG
Sbjct: 320 GCGARGQLG 328



 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 94/320 (29%), Positives = 150/320 (46%), Gaps = 11/320 (3%)

Query: 119 GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
           G +   L+ +  V++CG++  G LGH  E  +     +I   +  H+V V+  E+H+  +
Sbjct: 43  GNHSVFLLEDGEVYTCGANTKGQLGHEREGNKP---EQIGALADQHIVHVACGESHSLAL 99

Query: 179 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVH 238
              GQ+F+ G  S    G   T   +  PRL++ L      QV+ G      L   G   
Sbjct: 100 SDQGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFF 159

Query: 239 TCGSNTHGQLGHGDTL-DRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 297
           T G N+HGQLG G     + +P+ +  LE +  + Q+ AG ++  A++ +G V+ +G  +
Sbjct: 160 TWGRNSHGQLGLGKEFPSQASPQRVRSLEGI-PLAQVVAGGAHSFALSLSGAVFGWGMNN 218

Query: 298 NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 357
              LG  ++ D   P  ++  R +   VV +S G+EH   L  SG V+T+G G CG LGH
Sbjct: 219 AGQLGLSDEKDRESPCHVKLLRTQ--KVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGH 276

Query: 358 GDEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSD 416
               D+  P  +  L      Q+ C R+     +  +G +Y FG    G LG    G + 
Sbjct: 277 DSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLG---TGHTC 333

Query: 417 KVLRPRILDSLRAHHVSQIS 436
            V  P  +    A H  Q+S
Sbjct: 334 NVKCPSPVKGYWAAHSGQLS 353



 Score =  105 bits (263), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 91/295 (30%), Positives = 136/295 (46%), Gaps = 22/295 (7%)

Query: 114 MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSAS 171
           + +  G  H+L +S+   +FS G+   G LG    T   V+  R I   +   ++QVS  
Sbjct: 87  VHVACGESHSLALSDQGQLFSWGAGSDGQLGLM-TTEDSVAVPRLIQKLNQQTILQVSCG 145

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
             H   +   GQ FT G NS    G          P+ V +L+G+P  QV AG   +  L
Sbjct: 146 NWHCLALAADGQFFTWGRNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVVAGGAHSFAL 205

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
           ++ G V   G N  GQLG  D  DR +P  +  L     VV I+ G  +   +T +G V+
Sbjct: 206 SLSGAVFGWGMNNAGQLGLSDEKDRESPCHVK-LLRTQKVVYISCGEEHTAVLTKSGGVF 264

Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA-LDSSGYVYTWGKG 350
           +FG+GS   LGH   +DE+ PR +      G  V +++ G +H +A + SSG +Y +G G
Sbjct: 265 TFGAGSCGQLGHDSMNDEVNPRRV--LELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCG 322

Query: 351 YCGALGHGDEIDKTLPEPLS---------------SLKSHLAVQVCARKRKTFVL 390
             G LG G   +   P P+                  K H+  Q+ +   +TFVL
Sbjct: 323 ARGQLGTGHTCNVKCPSPVKGYWAAHSGQLSARADRFKYHIVKQIFSGGDQTFVL 377


>gi|449523373|ref|XP_004168698.1| PREDICTED: uncharacterized protein LOC101228735, partial [Cucumis
           sativus]
          Length = 958

 Score =  134 bits (336), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 104/324 (32%), Positives = 148/324 (45%), Gaps = 18/324 (5%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V Q++    H A V + G+VFT G+      GH   +R   RP LVE L       V  G
Sbjct: 130 VQQIACGVRHIALVTRQGEVFTWGEECGGRLGH-GIDRDFSRPHLVEFLAVSHVDFVACG 188

Query: 225 LNFTGFLTIRGHVHTCGSN--THGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 282
              T  +T    ++T G      G LGHG  +    PK +    E   V+ +A G  +  
Sbjct: 189 EYHTCAITSSNDLYTWGDGIFNSGILGHGTDISHWIPKRVVGSLEGLQVLSVACGTWHSA 248

Query: 283 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL---- 338
             T NG +Y+FG G+   LGHG++   + PR +Q     G+  ++V+ G  H  A+    
Sbjct: 249 LATSNGKLYTFGDGTYGVLGHGDRESVVYPREVQLL--SGLRTIKVACGVWHTAAIVEVM 306

Query: 339 ------DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVD 392
                  SS  ++TWG G    LGHG++    LP  +SSL  +   Q+      T  L  
Sbjct: 307 SQTGSNMSSRKLFTWGDGDKYRLGHGNKETYLLPTCVSSLIDYNFHQLACGHNMTVALTT 366

Query: 393 TGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLF 452
           +G V+  G   +G LG P    SD V+   + D L    V +IS G YHTVV+T R  +F
Sbjct: 367 SGHVFTMGGTAYGQLGNPS---SDGVIPCLVQDRLVGEFVEEISCGAYHTVVLTSRNEVF 423

Query: 453 GFGDNERAQLGHDTLRGCLEPTEI 476
            +G     +LGH  +     PT I
Sbjct: 424 SWGRGSNGRLGHGDVEDRKAPTLI 447



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 95/349 (27%), Positives = 154/349 (44%), Gaps = 28/349 (8%)

Query: 114 MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR---INFPSAAHVVQVS 169
            QI  G  H  L++    VF+ G    G LGHG +      F+R   + F + +HV  V+
Sbjct: 131 QQIACGVRHIALVTRQGEVFTWGEECGGRLGHGIDR----DFSRPHLVEFLAVSHVDFVA 186

Query: 170 ASENHAAFVLQSGQVFTCGDN--SSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF 227
             E H   +  S  ++T GD   +S   GH          R+V +L+G+    V  G   
Sbjct: 187 CGEYHTCAITSSNDLYTWGDGIFNSGILGHGTDISHWIPKRVVGSLEGLQVLSVACGTWH 246

Query: 228 TGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV--- 284
           +   T  G ++T G  T+G LGHGD      P+ +  L  +   +++A G  +  A+   
Sbjct: 247 SALATSNGKLYTFGDGTYGVLGHGDRESVVYPREVQLLSGL-RTIKVACGVWHTAAIVEV 305

Query: 285 ---TGNGV----VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
              TG+ +    ++++G G  + LGHG +   L P  + +      H  +++ G    VA
Sbjct: 306 MSQTGSNMSSRKLFTWGDGDKYRLGHGNKETYLLPTCVSSLIDYNFH--QLACGHNMTVA 363

Query: 338 LDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSS-LKSHLAVQVCARKRKTFVLVDTGSV 396
           L +SG+V+T G    G LG+    D  +P  +   L      ++      T VL     V
Sbjct: 364 LTTSGHVFTMGGTAYGQLGNPSS-DGVIPCLVQDRLVGEFVEEISCGAYHTVVLTSRNEV 422

Query: 397 YGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVV 445
           + +G    G LG  D  V D+   P ++++L+  HV  IS G   T  +
Sbjct: 423 FSWGRGSNGRLGHGD--VEDRKA-PTLIEALKDRHVKSISCGSNFTASI 468



 Score = 62.8 bits (151), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 48/173 (27%), Positives = 81/173 (46%), Gaps = 6/173 (3%)

Query: 306 QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTL 365
           ++D L P+ ++T     + V +++ G  H+  +   G V+TWG+   G LGHG + D + 
Sbjct: 113 KNDVLTPKPLET--NVVLDVQQIACGVRHIALVTRQGEVFTWGEECGGRLGHGIDRDFSR 170

Query: 366 PEPLSSLK-SHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRP-RI 423
           P  +  L  SH+    C  +  T  +  +  +Y +G   F S G    G       P R+
Sbjct: 171 PHLVEFLAVSHVDFVACG-EYHTCAITSSNDLYTWGDGIFNS-GILGHGTDISHWIPKRV 228

Query: 424 LDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 476
           + SL    V  ++ G +H+ + T  G+L+ FGD     LGH      + P E+
Sbjct: 229 VGSLEGLQVLSVACGTWHSALATSNGKLYTFGDGTYGVLGHGDRESVVYPREV 281


>gi|328715082|ref|XP_001946768.2| PREDICTED: e3 ubiquitin-protein ligase HERC2-like [Acyrthosiphon
            pisum]
          Length = 4404

 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 96/321 (29%), Positives = 148/321 (46%), Gaps = 19/321 (5%)

Query: 161  SAAHVVQVSASENHAAFVLQSGQVFTCGDNS------SFCCGHRDTNRPIFRPRLVEALK 214
            +A   +++         V   G+VF CGD+S       FC         +  PR +  L 
Sbjct: 2624 TALKPIEIVGGSKSLFIVSNEGKVFVCGDSSGGRLGIPFC-------GKVSSPRQIPGLS 2676

Query: 215  GVPCKQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV 272
                K V   +G      L++ G V + G    G+LGHGD L   TPK I  L     V 
Sbjct: 2677 QFVIKTVAVHSGGKHAMALSLDGKVLSWGDGEDGKLGHGDILTLDTPKLIDSLL-AKRVF 2735

Query: 273  QIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGD 332
             IA G ++  A+T +G +Y++G G    LGH ++  +  P+ ++ F  K I  V   + D
Sbjct: 2736 YIACGSAHSAAITSDGELYTWGQGQYGRLGHSDEVSQHTPKLVKEFVGKNITQVACGSRD 2795

Query: 333  EHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVD 392
               +ALDS G VY+WG G  G LG G       P+ +  L  H  VQ+    + +  L  
Sbjct: 2796 AQTLALDSEGNVYSWGDGDFGKLGRGGSDGCCTPQKVERLVGHRVVQIECGAQFSVALTA 2855

Query: 393  TGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLF 452
            TG V+ +G   +  LG    G  + V RP +++ L+   +  I+ G  H + V+ +G ++
Sbjct: 2856 TGQVWTWGKGEYYRLGL---GRGEHVRRPTLVNQLKLVTIDHIAVGTLHCIAVSTQGDVY 2912

Query: 453  GFGDNERAQLGHDTLRGCLEP 473
             +GDN+  Q G+ T     EP
Sbjct: 2913 CWGDNDHGQQGNGTTNANQEP 2933



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 93/337 (27%), Positives = 152/337 (45%), Gaps = 17/337 (5%)

Query: 151  CVSFTRINFP------SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCG---HRDTN 201
            C+  +++  P      S     QV   E     V   G+V+  G   S   G   +   N
Sbjct: 3559 CMDSSQVKKPLACDSLSVLKPTQVIGGEQTMFAVTSYGKVYASGYTESGRLGIGPYNPKN 3618

Query: 202  RPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKS 261
              +  P+LV+ L  +    V +G      L+  G V+  G    G+LG G+ +    P+ 
Sbjct: 3619 PYVVTPQLVQGLNNIIKVAVNSGGRHCLALSTTGEVYAWGDGDDGKLGLGNRVTHSKPQL 3678

Query: 262  IAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRK 321
            +  L +   ++ IA G  +  A++  G +Y++G G    LGHG+  D L P+ +Q     
Sbjct: 3679 VQSLSD-KCIIDIACGGFHSAAISRYGHLYTWGKGRYGRLGHGDYEDYLYPKLVQGLI-- 3735

Query: 322  GIHVVRVS--AGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQ 379
              HVV+V+  +GD   + + S   V++WG G  G LGH       LP  + SL     +Q
Sbjct: 3736 NYHVVKVACGSGDAQTMCVTSDDNVWSWGDGDYGKLGHNISESCKLPCKIESLSGKGIIQ 3795

Query: 380  VCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGL 439
            +    + +  L   G++Y +G   +  LG    G S+ V +P+ +  L+   + Q STG 
Sbjct: 3796 IDCGSQFSVALSANGTLYTWGKGDYFRLG---HGSSEHVRKPKPVSGLQGKKIVQFSTGS 3852

Query: 440  YHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 476
             H + +TD G ++ +GDN+  QLG  T      P  I
Sbjct: 3853 LHVLALTDDGEVYAWGDNDEGQLGDGTAHPIARPRPI 3889



 Score =  116 bits (290), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 93/319 (29%), Positives = 152/319 (47%), Gaps = 16/319 (5%)

Query: 131  VFSCGSSLCGVLG---HGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTC 187
            V++ G +  G LG   + P+    V+   +   +    V V++   H   +  +G+V+  
Sbjct: 3598 VYASGYTESGRLGIGPYNPKNPYVVTPQLVQGLNNIIKVAVNSGGRHCLALSTTGEVYAW 3657

Query: 188  GD--NSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTH 245
            GD  +     G+R T+    +P+LV++L       +  G   +  ++  GH++T G   +
Sbjct: 3658 GDGDDGKLGLGNRVTHS---KPQLVQSLSDKCIIDIACGGFHSAAISRYGHLYTWGKGRY 3714

Query: 246  GQLGHGDTLDRPTPKSIAPLEEVGSVVQIA--AGPSYMLAVTGNGVVYSFGSGSNFCLGH 303
            G+LGHGD  D   PK +  L     VV++A  +G +  + VT +  V+S+G G    LGH
Sbjct: 3715 GRLGHGDYEDYLYPKLVQGLINY-HVVKVACGSGDAQTMCVTSDDNVWSWGDGDYGKLGH 3773

Query: 304  GEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK 363
                    P  I++   KGI  +++  G +  VAL ++G +YTWGKG    LGHG     
Sbjct: 3774 NISESCKLPCKIESLSGKGI--IQIDCGSQFSVALSANGTLYTWGKGDYFRLGHGSSEHV 3831

Query: 364  TLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRI 423
              P+P+S L+    VQ          L D G VY +G    G LG    G +  + RPR 
Sbjct: 3832 RKPKPVSGLQGKKIVQFSTGSLHVLALTDDGEVYAWGDNDEGQLG---DGTAHPIARPRP 3888

Query: 424  LDSLRAHHVSQISTGLYHT 442
            + +L+   + Q+S G  H+
Sbjct: 3889 IAALKGKRIQQVSCGSAHS 3907



 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 81/261 (31%), Positives = 127/261 (48%), Gaps = 8/261 (3%)

Query: 206  RPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL 265
            RP   EAL  +   ++  G      ++  G V  CG ++ G+LG        +P+ I  L
Sbjct: 2616 RPTFNEALTALKPIEIVGGSKSLFIVSNEGKVFVCGDSSGGRLGIPFCGKVSSPRQIPGL 2675

Query: 266  EE-VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH 324
             + V   V + +G  + +A++ +G V S+G G +  LGHG+      P+ I +   K   
Sbjct: 2676 SQFVIKTVAVHSGGKHAMALSLDGKVLSWGDGEDGKLGHGDILTLDTPKLIDSLLAK--R 2733

Query: 325  VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVC--A 382
            V  ++ G  H  A+ S G +YTWG+G  G LGH DE+ +  P+ +         QV   +
Sbjct: 2734 VFYIACGSAHSAAITSDGELYTWGQGQYGRLGHSDEVSQHTPKLVKEFVGKNITQVACGS 2793

Query: 383  RKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHT 442
            R  +T  L   G+VY +G   FG LG   RG SD    P+ ++ L  H V QI  G   +
Sbjct: 2794 RDAQTLALDSEGNVYSWGDGDFGKLG---RGGSDGCCTPQKVERLVGHRVVQIECGAQFS 2850

Query: 443  VVVTDRGRLFGFGDNERAQLG 463
            V +T  G+++ +G  E  +LG
Sbjct: 2851 VALTATGQVWTWGKGEYYRLG 2871



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 90/357 (25%), Positives = 149/357 (41%), Gaps = 21/357 (5%)

Query: 116  ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
            + +G  H L +S +  V++ G    G LG G   T       +   S   ++ ++    H
Sbjct: 3638 VNSGGRHCLALSTTGEVYAWGDGDDGKLGLGNRVTHSKP-QLVQSLSDKCIIDIACGGFH 3696

Query: 175  AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT--AGLNFTGFLT 232
            +A + + G ++T G       GH D    ++ P+LV+ L      +V   +G   T  +T
Sbjct: 3697 SAAISRYGHLYTWGKGRYGRLGHGDYEDYLY-PKLVQGLINYHVVKVACGSGDAQTMCVT 3755

Query: 233  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
               +V + G   +G+LGH  +     P  I  L   G ++QI  G  + +A++ NG +Y+
Sbjct: 3756 SDDNVWSWGDGDYGKLGHNISESCKLPCKIESLSGKG-IIQIDCGSQFSVALSANGTLYT 3814

Query: 293  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 352
            +G G  F LGHG      +P+ +   +  G  +V+ S G  HV+AL   G VY WG    
Sbjct: 3815 WGKGDYFRLGHGSSEHVRKPKPVSGLQ--GKKIVQFSTGSLHVLALTDDGEVYAWGDNDE 3872

Query: 353  GALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDR 412
            G LG G       P P+++LK     QV             GS + F W    +    + 
Sbjct: 3873 GQLGDGTAHPIARPRPIAALKGKRIQQVSC-----------GSAHSFAWASEEACHTDNS 3921

Query: 413  GVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG 469
              +   L   IL     H +      L+H   + ++  L       R ++  D +R 
Sbjct: 3922 TPTTIPLEYDILQEFSVHELRNRLIFLHHFSTIINQTVLLFMPI--RGEISLDAIRS 3976



 Score = 82.4 bits (202), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 68/248 (27%), Positives = 109/248 (43%), Gaps = 18/248 (7%)

Query: 237  VHTCGSNTHGQLG--HGDTLDRPTPK----SIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 290
            V+  G N  GQLG  +G  + RPT      ++ P+E VG       G   +  V+  G V
Sbjct: 2595 VYVWGLNDKGQLGGLNGSKVKRPTFNEALTALKPIEIVG-------GSKSLFIVSNEGKV 2647

Query: 291  YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKG 350
            +  G  S   LG         PR I    +  I  V V +G +H +AL   G V +WG G
Sbjct: 2648 FVCGDSSGGRLGIPFCGKVSSPRQIPGLSQFVIKTVAVHSGGKHAMALSLDGKVLSWGDG 2707

Query: 351  YCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFP 410
              G LGHGD +    P+ + SL +     +      +  +   G +Y +G   +G LG  
Sbjct: 2708 EDGKLGHGDILTLDTPKLIDSLLAKRVFYIACGSAHSAAITSDGELYTWGQGQYGRLGHS 2767

Query: 411  DRGVSDKVLRPRILDSLRAHHVSQISTGLY--HTVVVTDRGRLFGFGDNERAQLGHDTLR 468
            D  VS     P+++      +++Q++ G     T+ +   G ++ +GD +  +LG     
Sbjct: 2768 DE-VSQHT--PKLVKEFVGKNITQVACGSRDAQTLALDSEGNVYSWGDGDFGKLGRGGSD 2824

Query: 469  GCLEPTEI 476
            GC  P ++
Sbjct: 2825 GCCTPQKV 2832



 Score = 58.2 bits (139), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 64/258 (24%), Positives = 112/258 (43%), Gaps = 26/258 (10%)

Query: 211 EALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDR-PTPKSIAPLEEVG 269
           + +  VP K V         +T +G V++ G N  G LGHG      PTP+ I    ++ 
Sbjct: 487 KQMMNVPMKSVDVYDETYLAVTQKGEVYSWGVNEFGALGHGQKYSSFPTPEPIVAFSKL- 545

Query: 270 SVVQIAAGPSYMLAVTGNGVVYSFGS---GSNFCLGHGEQHDELQPRAIQTFRRKGIHVV 326
            VV ++ G  +  AVT +G +Y +G     SN C           P  +++      HV 
Sbjct: 546 IVVMVSCGKDFCAAVTEDGKLYMWGKILHSSNCCY---------TPELVKSISE--WHVS 594

Query: 327 RVSAGD--EHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARK 384
           +VS G    + +AL   GYV+++ +      G  D+    +P  +  +  +  V +    
Sbjct: 595 KVSCGSSINNTLALSREGYVFSF-EYRNSDRGCDDKSLNVIPSMI--VFDYEIVSIYCHN 651

Query: 385 RKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV 444
               V+    +V+ +G      LG  +   S +V RP+ +  L    V+ +S    + + 
Sbjct: 652 DVNAVIDCANNVFTWGRGNNNMLGHNN---SFRVNRPKEVKFLSGKQVTSLSLADDYILA 708

Query: 445 VTDRGRLFGFG--DNERA 460
           +TD G+++ +G  DNE  
Sbjct: 709 LTDTGQVYCWGQLDNENT 726



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 64/236 (27%), Positives = 99/236 (41%), Gaps = 30/236 (12%)

Query: 116  ITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSA-SEN 173
            I  G  H+  I S+  +++ G    G LGH  E +Q        F    ++ QV+  S +
Sbjct: 2737 IACGSAHSAAITSDGELYTWGQGQYGRLGHSDEVSQHTPKLVKEF-VGKNITQVACGSRD 2795

Query: 174  HAAFVLQS-GQVFTCGDN---------SSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTA 223
                 L S G V++ GD          S  CC           P+ VE L G    Q+  
Sbjct: 2796 AQTLALDSEGNVYSWGDGDFGKLGRGGSDGCCT----------PQKVERLVGHRVVQIEC 2845

Query: 224  GLNFTGFLTIRGHVHTCGSNTHGQLG--HGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 281
            G  F+  LT  G V T G   + +LG   G+ + RPT   +    ++ ++  IA G  + 
Sbjct: 2846 GAQFSVALTATGQVWTWGKGEYYRLGLGRGEHVRRPT---LVNQLKLVTIDHIAVGTLHC 2902

Query: 282  LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
            +AV+  G VY +G   +   G+G  +   +PR +  F    I + RV  G    +A
Sbjct: 2903 IAVSTQGDVYCWGDNDHGQQGNGTTNANQEPRLVTNFN--NIKINRVGCGSSQSIA 2956



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 54/228 (23%), Positives = 94/228 (41%), Gaps = 25/228 (10%)

Query: 230 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 289
           +LT++  VH   +  +     G      T K +    E   V  +    + +L VT +G 
Sbjct: 412 YLTLQRKVHEIKNKKNIVQYWGKQFYPETKKKVILTLERLHVESVVCSRNEILVVTTSGT 471

Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 349
           ++ F S S   L   E+            +   + +  V   DE  +A+   G VY+WG 
Sbjct: 472 LH-FISYSIDSLNFEEK------------QMMNVPMKSVDVYDETYLAVTQKGEVYSWGV 518

Query: 350 GYCGALGHGDEIDK-TLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLG 408
              GALGHG +      PEP+ +    + V V   K     + + G +Y +G +      
Sbjct: 519 NEFGALGHGQKYSSFPTPEPIVAFSKLIVVMVSCGKDFCAAVTEDGKLYMWGKILHS--- 575

Query: 409 FPDRGVSDKVLRPRILDSLRAHHVSQISTG--LYHTVVVTDRGRLFGF 454
                 S+    P ++ S+   HVS++S G  + +T+ ++  G +F F
Sbjct: 576 ------SNCCYTPELVKSISEWHVSKVSCGSSINNTLALSREGYVFSF 617



 Score = 50.1 bits (118), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 39/137 (28%), Positives = 67/137 (48%), Gaps = 11/137 (8%)

Query: 333  EHVVALDSSGYVYTWGKGYCGALG--HGDEIDK-TLPEPLSSLKSHLAVQVCARKRKTFV 389
            E  + +DS   VY WG    G LG  +G ++ + T  E L++LK    +++    +  F+
Sbjct: 2584 ESKIRVDSEYAVYVWGLNDKGQLGGLNGSKVKRPTFNEALTALK---PIEIVGGSKSLFI 2640

Query: 390  LVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTD 447
            + + G V+  G    G LG P  G   KV  PR +  L    +  ++  +G  H + ++ 
Sbjct: 2641 VSNEGKVFVCGDSSGGRLGIPFCG---KVSSPRQIPGLSQFVIKTVAVHSGGKHAMALSL 2697

Query: 448  RGRLFGFGDNERAQLGH 464
             G++  +GD E  +LGH
Sbjct: 2698 DGKVLSWGDGEDGKLGH 2714



 Score = 45.4 bits (106), Expect = 0.057,   Method: Compositional matrix adjust.
 Identities = 31/121 (25%), Positives = 52/121 (42%), Gaps = 1/121 (0%)

Query: 344  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 403
            VY WG  + G L   D      P    SL      QV   ++  F +   G VY  G+  
Sbjct: 3546 VYVWGHNHRGQLACMDSSQVKKPLACDSLSVLKPTQVIGGEQTMFAVTSYGKVYASGYTE 3605

Query: 404  FGSLGF-PDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQL 462
             G LG  P    +  V+ P+++  L       +++G  H + ++  G ++ +GD +  +L
Sbjct: 3606 SGRLGIGPYNPKNPYVVTPQLVQGLNNIIKVAVNSGGRHCLALSTTGEVYAWGDGDDGKL 3665

Query: 463  G 463
            G
Sbjct: 3666 G 3666


>gi|444729789|gb|ELW70193.1| putative E3 ubiquitin-protein ligase HERC3 [Tupaia chinensis]
          Length = 983

 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 96/301 (31%), Positives = 147/301 (48%), Gaps = 29/301 (9%)

Query: 193 FCCGHRDTNRP---------IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 243
            C G+    +P         +  P++   +     K+V  G N + FL   G V+TCG N
Sbjct: 2   LCWGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLN 61

Query: 244 THGQLGHGDTLDRPTPKSIAPLEEVGS-----VVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
           T GQLGH    ++P        E++G+     ++ +A G S+ LA++  G ++S+G+GS+
Sbjct: 62  TKGQLGHEREGNKP--------EQIGALADQHIIHVACGESHSLALSDQGQLFSWGAGSD 113

Query: 299 FCLGHGEQHDELQ-PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 357
             LG     D +  PR IQ   ++ I  ++VS G+ H +AL + G  +TWGK   G LG 
Sbjct: 114 GQLGLMTTEDSVAVPRLIQKLNQQTI--LQVSCGNWHCLALAADGQFFTWGKNSHGQLGL 171

Query: 358 GDEI-DKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSD 416
           G E   +  P+ + SL+     QV A    +F L  +G+V+G+G    G LG  D    +
Sbjct: 172 GKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRE 231

Query: 417 KVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 476
               P  +  LR   V  IS G  HT V+T  G +F FG     QLGHD++   + P  +
Sbjct: 232 S---PCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRV 288

Query: 477 F 477
            
Sbjct: 289 L 289



 Score =  125 bits (313), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 97/309 (31%), Positives = 159/309 (51%), Gaps = 14/309 (4%)

Query: 159 FPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVP 217
           F S   V +V+   NH+ F+L+ G+V+TCG N+    GH R+ N+P      + AL    
Sbjct: 30  FISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGNKP----EQIGALADQH 85

Query: 218 CKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDR-PTPKSIAPLEEVGSVVQIAA 276
              V  G + +  L+ +G + + G+ + GQLG   T D    P+ I  L +  +++Q++ 
Sbjct: 86  IIHVACGESHSLALSDQGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQ-QTILQVSC 144

Query: 277 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH-DELQPRAIQTFRRKGIHVVRVSAGDEHV 335
           G  + LA+  +G  +++G  S+  LG G++   +  P+ +++   +GI + +V+AG  H 
Sbjct: 145 GNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSL--EGIPLAQVAAGGAHS 202

Query: 336 VALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGS 395
            AL  SG V+ WG    G LG  DE D+  P  +  L++   V +   +  T VL  +G 
Sbjct: 203 FALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGG 262

Query: 396 VYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV-VTDRGRLFGF 454
           V+ FG    G LG     ++D+V  PR +  L    V+QI+ G  HT+  V   G ++ F
Sbjct: 263 VFTFGAGSCGQLG--HDSMNDEV-NPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAF 319

Query: 455 GDNERAQLG 463
           G   R QLG
Sbjct: 320 GCGARGQLG 328



 Score =  124 bits (312), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 94/320 (29%), Positives = 150/320 (46%), Gaps = 11/320 (3%)

Query: 119 GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
           G +   L+ +  V++CG +  G LGH  E  +     +I   +  H++ V+  E+H+  +
Sbjct: 43  GNHSVFLLEDGEVYTCGLNTKGQLGHEREGNKP---EQIGALADQHIIHVACGESHSLAL 99

Query: 179 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVH 238
              GQ+F+ G  S    G   T   +  PRL++ L      QV+ G      L   G   
Sbjct: 100 SDQGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFF 159

Query: 239 TCGSNTHGQLGHGDTL-DRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 297
           T G N+HGQLG G     + +P+ +  LE +  + Q+AAG ++  A++ +G V+ +G  +
Sbjct: 160 TWGKNSHGQLGLGKEFPSQASPQRVRSLEGI-PLAQVAAGGAHSFALSLSGAVFGWGMNN 218

Query: 298 NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 357
              LG  ++ D   P  ++  R +   VV +S G+EH   L  SG V+T+G G CG LGH
Sbjct: 219 AGQLGLSDEKDRESPCHVKLLRTQ--KVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGH 276

Query: 358 GDEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSD 416
               D+  P  +  L      Q+ C R+     +  +G +Y FG    G LG    G + 
Sbjct: 277 DSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLG---TGHTC 333

Query: 417 KVLRPRILDSLRAHHVSQIS 436
            V  P  +    A H  Q+S
Sbjct: 334 NVKCPSPVKGYWAAHSGQLS 353



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 91/295 (30%), Positives = 136/295 (46%), Gaps = 22/295 (7%)

Query: 114 MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSAS 171
           + +  G  H+L +S+   +FS G+   G LG    T   V+  R I   +   ++QVS  
Sbjct: 87  IHVACGESHSLALSDQGQLFSWGAGSDGQLGLM-TTEDSVAVPRLIQKLNQQTILQVSCG 145

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
             H   +   GQ FT G NS    G          P+ V +L+G+P  QV AG   +  L
Sbjct: 146 NWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFAL 205

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
           ++ G V   G N  GQLG  D  DR +P  +  L     VV I+ G  +   +T +G V+
Sbjct: 206 SLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLR-TQKVVYISCGEEHTAVLTKSGGVF 264

Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA-LDSSGYVYTWGKG 350
           +FG+GS   LGH   +DE+ PR +      G  V +++ G +H +A + SSG +Y +G G
Sbjct: 265 TFGAGSCGQLGHDSMNDEVNPRRV--LELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCG 322

Query: 351 YCGALGHGDEIDKTLPEPLS---------------SLKSHLAVQVCARKRKTFVL 390
             G LG G   +   P P+                  K H+  Q+ +   +TFVL
Sbjct: 323 ARGQLGTGHTCNVKCPSPVKGYWAAHSGQLSARADRFKYHIVKQIFSGGDQTFVL 377


>gi|307193259|gb|EFN76150.1| Probable E3 ubiquitin-protein ligase HERC4 [Harpegnathos saltator]
          Length = 1054

 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 103/355 (29%), Positives = 175/355 (49%), Gaps = 21/355 (5%)

Query: 131 VFSCGSSLCGVLGHG-PETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGD 189
           +F  GS++ G LG G  E     +   +NF  A  + Q++  +N+   V + GQV++CG+
Sbjct: 1   MFCWGSTIHGELGLGGIEDENIFTPREVNFEKANEIEQIACGDNYTIAVTKEGQVYSCGN 60

Query: 190 NSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLG 249
           N     G     +   R +L+  +  +  ++   G + T  +   G + + GSN  GQLG
Sbjct: 61  NDHGQLGQEKGRK---RLQLISGIDPLAFRKAACGSSHTLVVNEWGQLFSWGSNVEGQLG 117

Query: 250 HGDTLDRPTPKSIAP--LEEVGS--VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHG- 304
               LDR +     P  ++ +G+  +VQIA G  + +A+T NG +Y++GS S+  LG G 
Sbjct: 118 ----LDRVSATIREPRMVKTLGTKIIVQIACGLKHSIALTNNGELYAWGSNSDGQLGLGS 173

Query: 305 EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKT 364
           +   EL+P+ + +     + +  V+ G  H + +  SG V+ WG+   G LG  D  ++ 
Sbjct: 174 DTKMELKPKLVHSL--AAVPIAFVACGGYHTIVISKSGAVFAWGRNTFGQLGLSDIQNRN 231

Query: 365 LPEPLSSLK-SHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRI 423
           +P  L +L+ S +    C  +   F+ +D G V+  G   +G LG    G     + PR 
Sbjct: 232 VPCQLRTLRNSRVCYAACGEEFSVFLTMD-GGVFTCGAGMYGQLG---HGNKTSEILPRQ 287

Query: 424 LDSLRAHHVSQISTGLYHTV-VVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF 477
           +  L    V+QIS G  HT+ +V  RGR++ +G     QLG+   +    P  +F
Sbjct: 288 IMELMGSTVTQISCGRRHTLALVPSRGRVYAWGLGGAGQLGNRIAQNSTTPQVVF 342



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 91/300 (30%), Positives = 140/300 (46%), Gaps = 15/300 (5%)

Query: 115 QITTGRYHTLLISNS-SVFSCGSSLCGVLGH--GPETTQCVS-FTRINFPSAAHVVQVSA 170
           QI  G  +T+ ++    V+SCG++  G LG   G +  Q +S    + F  AA       
Sbjct: 38  QIACGDNYTIAVTKEGQVYSCGNNDHGQLGQEKGRKRLQLISGIDPLAFRKAA------C 91

Query: 171 SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
             +H   V + GQ+F+ G N     G    +  I  PR+V+ L      Q+  GL  +  
Sbjct: 92  GSSHTLVVNEWGQLFSWGSNVEGQLGLDRVSATIREPRMVKTLGTKIIVQIACGLKHSIA 151

Query: 231 LTIRGHVHTCGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 289
           LT  G ++  GSN+ GQLG G DT     PK +  L  V  +  +A G  + + ++ +G 
Sbjct: 152 LTNNGELYAWGSNSDGQLGLGSDTKMELKPKLVHSLAAV-PIAFVACGGYHTIVISKSGA 210

Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 349
           V+++G  +   LG  +  +   P  ++T R     V   + G+E  V L   G V+T G 
Sbjct: 211 VFAWGRNTFGQLGLSDIQNRNVPCQLRTLRNS--RVCYAACGEEFSVFLTMDGGVFTCGA 268

Query: 350 GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDT-GSVYGFGWMGFGSLG 408
           G  G LGHG++  + LP  +  L      Q+   +R T  LV + G VY +G  G G LG
Sbjct: 269 GMYGQLGHGNKTSEILPRQIMELMGSTVTQISCGRRHTLALVPSRGRVYAWGLGGAGQLG 328



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 76/251 (30%), Positives = 116/251 (46%), Gaps = 5/251 (1%)

Query: 119 GRYHTLLISN-SSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAF 177
           G  HTL+++    +FS GS++ G LG    +        +       +VQ++    H+  
Sbjct: 92  GSSHTLVVNEWGQLFSWGSNVEGQLGLDRVSATIREPRMVKTLGTKIIVQIACGLKHSIA 151

Query: 178 VLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHV 237
           +  +G+++  G NS    G     +   +P+LV +L  VP   V  G   T  ++  G V
Sbjct: 152 LTNNGELYAWGSNSDGQLGLGSDTKMELKPKLVHSLAAVPIAFVACGGYHTIVISKSGAV 211

Query: 238 HTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 297
              G NT GQLG  D  +R  P  +  L     V   A G  + + +T +G V++ G+G 
Sbjct: 212 FAWGRNTFGQLGLSDIQNRNVPCQLRTLRN-SRVCYAACGEEFSVFLTMDGGVFTCGAGM 270

Query: 298 NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL-DSSGYVYTWGKGYCGALG 356
              LGHG +  E+ PR I      G  V ++S G  H +AL  S G VY WG G  G LG
Sbjct: 271 YGQLGHGNKTSEILPRQIMELM--GSTVTQISCGRRHTLALVPSRGRVYAWGLGGAGQLG 328

Query: 357 HGDEIDKTLPE 367
           +    + T P+
Sbjct: 329 NRIAQNSTTPQ 339


>gi|440800955|gb|ELR21981.1| regulator of chromosome condensation (RCC1) repeat domain
           containing protein [Acanthamoeba castellanii str. Neff]
          Length = 447

 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 99/292 (33%), Positives = 152/292 (52%), Gaps = 21/292 (7%)

Query: 205 FRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNT-----HGQLGHGDTLDRPTP 259
            RP+ VEAL     + V+AGL  +   T  G + + G  +      G+LGHGD   +  P
Sbjct: 98  LRPKCVEALARERVRDVSAGLYHSLVATKDGGLLSFGYGSANVVVDGRLGHGDQRTQMIP 157

Query: 260 KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFR 319
           + +  L  V  +V++AAG  + L ++  G V+SFG G +  LGHG+Q  +L P+ I + +
Sbjct: 158 RPVLSLSGV-RIVKVAAGAHHSLVLSDQGNVFSFGVGIDGSLGHGDQARQLVPKLISSLQ 216

Query: 320 RKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQ 379
           R+   VV ++AG  H + +  SG VY++G G  GALGHGD     +P+ +       AV+
Sbjct: 217 RE--KVVDIAAGSAHSLVVAESGDVYSFGLGSEGALGHGDTDMSLVPKKIEHFVQRPAVK 274

Query: 380 VCARK------RKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVS 433
           V A         K +VL   G V  FG   +G LG    G   +++       + A  V 
Sbjct: 275 VAAGGSHSLVLSKLYVLEQEGRVLSFGQNSYGQLGL---GHFSRMIASPAQVQVEAAAV- 330

Query: 434 QISTGLYHTVVVTDRGRLFGFGDNERAQLGH-DTLRGCLEPTEIFIQEMEED 484
           +I  G +H++V+T+ GR++ FG  +  QLGH + LR   EPT   IQ +E +
Sbjct: 331 EIEAGAHHSLVLTNDGRVYSFGLAQHGQLGHGNDLRDNPEPT--LIQSLERE 380



 Score =  123 bits (308), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 100/324 (30%), Positives = 153/324 (47%), Gaps = 18/324 (5%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCC-----GHRDTNRPIFRPRLVEALKGVPCK 219
           V  VSA   H+    + G + + G  S+        GH D  R    PR V +L GV   
Sbjct: 111 VRDVSAGLYHSLVATKDGGLLSFGYGSANVVVDGRLGHGD-QRTQMIPRPVLSLSGVRIV 169

Query: 220 QVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPS 279
           +V AG + +  L+ +G+V + G    G LGHGD   +  PK I+ L+    VV IAAG +
Sbjct: 170 KVAAGAHHSLVLSDQGNVFSFGVGIDGSLGHGDQARQLVPKLISSLQRE-KVVDIAAGSA 228

Query: 280 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEH----- 334
           + L V  +G VYSFG GS   LGHG+    L P+ I+ F ++    V+V+AG  H     
Sbjct: 229 HSLVVAESGDVYSFGLGSEGALGHGDTDMSLVPKKIEHFVQR--PAVKVAAGGSHSLVLS 286

Query: 335 -VVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDT 393
            +  L+  G V ++G+   G LG G    + +  P        AV++ A    + VL + 
Sbjct: 287 KLYVLEQEGRVLSFGQNSYGQLGLG-HFSRMIASPAQVQVEAAAVEIEAGAHHSLVLTND 345

Query: 394 GSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFG 453
           G VY FG    G LG  +    +    P ++ SL    +  ++ G   ++V++  G +F 
Sbjct: 346 GRVYSFGLAQHGQLGHGNDLRDNP--EPTLIQSLERERIVDVAAGNNFSLVLSAEGTVFS 403

Query: 454 FGDNERAQLGHDTLRGCLEPTEIF 477
           FG  +  +LG        +PT +F
Sbjct: 404 FGCGKNGRLGKGDESNATQPTVVF 427



 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 73/226 (32%), Positives = 119/226 (52%), Gaps = 17/226 (7%)

Query: 249 GHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC-----LGH 303
           GHGD +D+  PK +  L     V  ++AG  + L  T +G + SFG GS        LGH
Sbjct: 90  GHGDHVDKLRPKCVEALARE-RVRDVSAGLYHSLVATKDGGLLSFGYGSANVVVDGRLGH 148

Query: 304 GEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK 363
           G+Q  ++ PR + +    G+ +V+V+AG  H + L   G V+++G G  G+LGHGD+  +
Sbjct: 149 GDQRTQMIPRPVLSL--SGVRIVKVAAGAHHSLVLSDQGNVFSFGVGIDGSLGHGDQARQ 206

Query: 364 TLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRI 423
            +P+ +SSL+    V + A    + V+ ++G VY FG    G+LG  D   +D  L P+ 
Sbjct: 207 LVPKLISSLQREKVVDIAAGSAHSLVVAESGDVYSFGLGSEGALGHGD---TDMSLVPKK 263

Query: 424 LDSLRAHHVSQISTGLYHTVVVT------DRGRLFGFGDNERAQLG 463
           ++        +++ G  H++V++        GR+  FG N   QLG
Sbjct: 264 IEHFVQRPAVKVAAGGSHSLVLSKLYVLEQEGRVLSFGQNSYGQLG 309



 Score =  112 bits (280), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 104/346 (30%), Positives = 162/346 (46%), Gaps = 27/346 (7%)

Query: 116 ITTGRYHTLLISNSS---VFSCGSS---LCGVLGHGPETTQCVSFTRINFPSAAHVVQVS 169
           ++ G YH+L+ +       F  GS+   + G LGHG + TQ +    ++  S   +V+V+
Sbjct: 114 VSAGLYHSLVATKDGGLLSFGYGSANVVVDGRLGHGDQRTQMIPRPVLSL-SGVRIVKVA 172

Query: 170 ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
           A  +H+  +   G VF+ G       GH D  R +  P+L+ +L+      + AG   + 
Sbjct: 173 AGAHHSLVLSDQGNVFSFGVGIDGSLGHGDQARQLV-PKLISSLQREKVVDIAAGSAHSL 231

Query: 230 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTG--- 286
            +   G V++ G  + G LGHGDT     PK I    +    V++AAG S+ L ++    
Sbjct: 232 VVAESGDVYSFGLGSEGALGHGDTDMSLVPKKIEHFVQR-PAVKVAAGGSHSLVLSKLYV 290

Query: 287 ---NGVVYSFGSGSNFCLGHGEQHDEL-QPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
               G V SFG  S   LG G     +  P  +Q         V + AG  H + L + G
Sbjct: 291 LEQEGRVLSFGQNSYGQLGLGHFSRMIASPAQVQVEAA----AVEIEAGAHHSLVLTNDG 346

Query: 343 YVYTWGKGYCGALGHGDEIDKTLPEP--LSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 400
            VY++G    G LGHG+++ +  PEP  + SL+    V V A    + VL   G+V+ FG
Sbjct: 347 RVYSFGLAQHGQLGHGNDL-RDNPEPTLIQSLERERIVDVAAGNNFSLVLSAEGTVFSFG 405

Query: 401 WMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT 446
               G LG   +G      +P ++ +   H VS IS G  H++VV 
Sbjct: 406 CGKNGRLG---KGDESNATQPTVVFAA-GHTVSAISAGYSHSLVVV 447



 Score = 89.0 bits (219), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 76/229 (33%), Positives = 113/229 (49%), Gaps = 15/229 (6%)

Query: 114 MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           + I  G  H+L+++ S  V+S G    G LGHG +T   +   +I        V+V+A  
Sbjct: 221 VDIAAGSAHSLVVAESGDVYSFGLGSEGALGHG-DTDMSLVPKKIEHFVQRPAVKVAAGG 279

Query: 173 NHAA-----FVL-QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN 226
           +H+      +VL Q G+V + G NS    G    +R I  P  V+        ++ AG +
Sbjct: 280 SHSLVLSKLYVLEQEGRVLSFGQNSYGQLGLGHFSRMIASPAQVQVE--AAAVEIEAGAH 337

Query: 227 FTGFLTIRGHVHTCGSNTHGQLGHGDTL-DRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 285
            +  LT  G V++ G   HGQLGHG+ L D P P  I  LE    +V +AAG ++ L ++
Sbjct: 338 HSLVLTNDGRVYSFGLAQHGQLGHGNDLRDNPEPTLIQSLERE-RIVDVAAGNNFSLVLS 396

Query: 286 GNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEH 334
             G V+SFG G N  LG G++ +  QP  +      G  V  +SAG  H
Sbjct: 397 AEGTVFSFGCGKNGRLGKGDESNATQPTVVFA---AGHTVSAISAGYSH 442



 Score = 49.7 bits (117), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 39/144 (27%), Positives = 63/144 (43%), Gaps = 8/144 (5%)

Query: 350 GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGF----- 404
           G     GHGD +DK  P+ + +L       V A    + V    G +  FG+        
Sbjct: 84  GLADPSGHGDHVDKLRPKCVEALARERVRDVSAGLYHSLVATKDGGLLSFGYGSANVVVD 143

Query: 405 GSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 464
           G LG  D+      + PR + SL    + +++ G +H++V++D+G +F FG      LGH
Sbjct: 144 GRLGHGDQRTQ---MIPRPVLSLSGVRIVKVAAGAHHSLVLSDQGNVFSFGVGIDGSLGH 200

Query: 465 DTLRGCLEPTEIFIQEMEEDTGLA 488
                 L P  I   + E+   +A
Sbjct: 201 GDQARQLVPKLISSLQREKVVDIA 224


>gi|117558047|gb|AAI27373.1| LOC100036667 protein [Xenopus (Silurana) tropicalis]
          Length = 967

 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 101/311 (32%), Positives = 148/311 (47%), Gaps = 12/311 (3%)

Query: 156 RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 215
           R +F    +V  V     H  FVL  G V+TCG N     GH  + R   +P  V AL  
Sbjct: 27  RCDFFINKNVRDVGCGSRHTVFVLDDGTVYTCGCNDLGQLGHDKSRR---KPEQVGALDA 83

Query: 216 VPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDR-PTPKSIAPLEEVGSVVQI 274
                V+ G   T  L  +G V + G   +GQ+G     +    P++I  L +V  +VQ+
Sbjct: 84  QIIVAVSCGEAHTLALNDKGQVFSWGHAVYGQIGLSTAEEYIRVPRNIKSLSDV-QIVQV 142

Query: 275 AAGPSYMLAVTGNGVVYSFGSGSNFCLGHG-EQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           A G  + LA++ +  ++S+G      LG G E   E  PR I++    GI    ++AG  
Sbjct: 143 ACGHHHSLALSKDSDIFSWGQNQYGQLGLGLEIKKECAPRHIKSL--SGIPFAHIAAGGG 200

Query: 334 HVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDT 393
           H  AL  SG ++ WG+   G LG  DE D+ +P  L SL+S   + +C  +  T  L   
Sbjct: 201 HSFALTISGAIFGWGRNKFGQLGLTDETDRNVPALLKSLRSQKIIHICCGEDHTAALTKE 260

Query: 394 GSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV-VTDRGRLF 452
           G V+ FG  G+G LG      ++  + PR +  L    V+QI+ G  HT+  V   GR++
Sbjct: 261 GGVFTFGAGGYGQLG---HNSTNHEVNPRKVFELMGSIVTQIACGRQHTLAFVPSSGRIY 317

Query: 453 GFGDNERAQLG 463
            FG     QLG
Sbjct: 318 SFGLGGNGQLG 328



 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 82/276 (29%), Positives = 135/276 (48%), Gaps = 10/276 (3%)

Query: 204 IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 263
           +  PR  +       + V  G   T F+   G V+TCG N  GQLGH  +  R  P+ + 
Sbjct: 22  VLEPRRCDFFINKNVRDVGCGSRHTVFVLDDGTVYTCGCNDLGQLGHDKS--RRKPEQVG 79

Query: 264 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQ-PRAIQTFRRKG 322
            L+    +V ++ G ++ LA+   G V+S+G      +G     + ++ PR I++     
Sbjct: 80  ALD-AQIIVAVSCGEAHTLALNDKGQVFSWGHAVYGQIGLSTAEEYIRVPRNIKSL--SD 136

Query: 323 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTL-PEPLSSLKSHLAVQVC 381
           + +V+V+ G  H +AL     +++WG+   G LG G EI K   P  + SL       + 
Sbjct: 137 VQIVQVACGHHHSLALSKDSDIFSWGQNQYGQLGLGLEIKKECAPRHIKSLSGIPFAHIA 196

Query: 382 ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYH 441
           A    +F L  +G+++G+G   FG LG  D   +D+ + P +L SLR+  +  I  G  H
Sbjct: 197 AGGGHSFALTISGAIFGWGRNKFGQLGLTDE--TDRNV-PALLKSLRSQKIIHICCGEDH 253

Query: 442 TVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF 477
           T  +T  G +F FG     QLGH++    + P ++F
Sbjct: 254 TAALTKEGGVFTFGAGGYGQLGHNSTNHEVNPRKVF 289



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 75/253 (29%), Positives = 121/253 (47%), Gaps = 5/253 (1%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           ++ G  HTL +++   VFS G ++ G +G             I   S   +VQV+   +H
Sbjct: 89  VSCGEAHTLALNDKGQVFSWGHAVYGQIGLSTAEEYIRVPRNIKSLSDVQIVQVACGHHH 148

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 234
           +  + +   +F+ G N     G     +    PR +++L G+P   + AG   +  LTI 
Sbjct: 149 SLALSKDSDIFSWGQNQYGQLGLGLEIKKECAPRHIKSLSGIPFAHIAAGGGHSFALTIS 208

Query: 235 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 294
           G +   G N  GQLG  D  DR  P  +  L     ++ I  G  +  A+T  G V++FG
Sbjct: 209 GAIFGWGRNKFGQLGLTDETDRNVPALLKSLRS-QKIIHICCGEDHTAALTKEGGVFTFG 267

Query: 295 SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA-LDSSGYVYTWGKGYCG 353
           +G    LGH   + E+ PR +  F   G  V +++ G +H +A + SSG +Y++G G  G
Sbjct: 268 AGGYGQLGHNSTNHEVNPRKV--FELMGSIVTQIACGRQHTLAFVPSSGRIYSFGLGGNG 325

Query: 354 ALGHGDEIDKTLP 366
            LG G  I++  P
Sbjct: 326 QLGTGSTINRKSP 338



 Score =  101 bits (251), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 79/291 (27%), Positives = 132/291 (45%), Gaps = 8/291 (2%)

Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 179
           R+   ++ + +V++CG +  G LGH     +     ++    A  +V VS  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHDKSRRKP---EQVGALDAQIIVAVSCGEAHTLALN 100

Query: 180 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 239
             GQVF+ G       G       I  PR +++L  V   QV  G + +  L+    + +
Sbjct: 101 DKGQVFSWGHAVYGQIGLSTAEEYIRVPRNIKSLSDVQIVQVACGHHHSLALSKDSDIFS 160

Query: 240 CGSNTHGQLGHGDTLDRP-TPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
            G N +GQLG G  + +   P+ I  L  +     IAAG  +  A+T +G ++ +G    
Sbjct: 161 WGQNQYGQLGLGLEIKKECAPRHIKSLSGI-PFAHIAAGGGHSFALTISGAIFGWGRNKF 219

Query: 299 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 358
             LG  ++ D   P  +++ R + I  + +  G++H  AL   G V+T+G G  G LGH 
Sbjct: 220 GQLGLTDETDRNVPALLKSLRSQKI--IHICCGEDHTAALTKEGGVFTFGAGGYGQLGHN 277

Query: 359 DEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLG 408
               +  P  +  L   +  Q+ C R+     +  +G +Y FG  G G LG
Sbjct: 278 STNHEVNPRKVFELMGSIVTQIACGRQHTLAFVPSSGRIYSFGLGGNGQLG 328



 Score = 78.6 bits (192), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 67/207 (32%), Positives = 102/207 (49%), Gaps = 8/207 (3%)

Query: 114 MQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +Q+  G +H+L +S +S +FS G +  G LG G E  +  +   I   S      ++A  
Sbjct: 140 VQVACGHHHSLALSKDSDIFSWGQNQYGQLGLGLEIKKECAPRHIKSLSGIPFAHIAAGG 199

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRD-TNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
            H+  +  SG +F  G N     G  D T+R +  P L+++L+      +  G + T  L
Sbjct: 200 GHSFALTISGAIFGWGRNKFGQLGLTDETDRNV--PALLKSLRSQKIIHICCGEDHTAAL 257

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGV 289
           T  G V T G+  +GQLGH  T     P+ +   E +GS+V QIA G  + LA V  +G 
Sbjct: 258 TKEGGVFTFGAGGYGQLGHNSTNHEVNPRKV--FELMGSIVTQIACGRQHTLAFVPSSGR 315

Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAIQ 316
           +YSFG G N  LG G   +   P  ++
Sbjct: 316 IYSFGLGGNGQLGTGSTINRKSPFTVK 342


>gi|334187769|ref|NP_001190338.1| regulator of chromosome condensation-like protein with FYVE zinc
           finger domain [Arabidopsis thaliana]
 gi|332005321|gb|AED92704.1| regulator of chromosome condensation-like protein with FYVE zinc
           finger domain [Arabidopsis thaliana]
          Length = 1139

 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 97/313 (30%), Positives = 148/313 (47%), Gaps = 20/313 (6%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVPCKQVTA 223
           V  ++    HA  V + G+ F+ G+ S    GH  D+N  +  P+L++AL     + V  
Sbjct: 348 VQNIACGGQHAVLVTKQGESFSWGEESEGRLGHGVDSN--VQHPKLIDALNTTNIELVAC 405

Query: 224 GLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
           G   +  +T+ G ++T G    G LGHG+ +    PK +  L E   V  IA GP +   
Sbjct: 406 GEYHSCAVTLSGDLYTWGKGDFGILGHGNEVSHWVPKRVNFLMEGIHVSSIACGPYHTAV 465

Query: 284 VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL----- 338
           VT  G +++FG G+   LGHG++     PR + +   KG+  VR + G  H  A+     
Sbjct: 466 VTSAGQLFTFGDGTFGVLGHGDRKSVFIPREVDSL--KGLRTVRAACGVWHTAAVVEVMV 523

Query: 339 -------DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 391
                   SSG ++TWG G    LGHGD+  K +P  +++L      QV      T  L 
Sbjct: 524 GSSSSSNCSSGKLFTWGDGDKSRLGHGDKEPKLVPTCVAALVEPNFCQVACGHSLTVALT 583

Query: 392 DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRL 451
            +G VY  G   +G LG P    +D  +  R+   L    V +I+ G YH  V+T R  +
Sbjct: 584 TSGHVYTMGSPVYGQLGNPH---ADGKVPTRVDGKLHKSFVEEIACGAYHVAVLTSRTEV 640

Query: 452 FGFGDNERAQLGH 464
           + +G     +LGH
Sbjct: 641 YTWGKGSNGRLGH 653



 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 92/290 (31%), Positives = 138/290 (47%), Gaps = 20/290 (6%)

Query: 99  SVEHSSDIVETSAGNMQ-ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR 156
           +V+H   I   +  N++ +  G YH+  ++ S  +++ G    G+LGHG E +  V   R
Sbjct: 385 NVQHPKLIDALNTTNIELVACGEYHSCAVTLSGDLYTWGKGDFGILGHGNEVSHWVP-KR 443

Query: 157 INF-PSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 215
           +NF     HV  ++    H A V  +GQ+FT GD +    GH D  + +F PR V++LKG
Sbjct: 444 VNFLMEGIHVSSIACGPYHTAVVTSAGQLFTFGDGTFGVLGHGD-RKSVFIPREVDSLKG 502

Query: 216 VPCKQVTAGLNFTGFLT------------IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 263
           +   +   G+  T  +               G + T G     +LGHGD   +  P  +A
Sbjct: 503 LRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDKSRLGHGDKEPKLVPTCVA 562

Query: 264 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGI 323
            L E  +  Q+A G S  +A+T +G VY+ GS     LG+     ++  R      +   
Sbjct: 563 ALVEP-NFCQVACGHSLTVALTTSGHVYTMGSPVYGQLGNPHADGKVPTRVDGKLHKS-- 619

Query: 324 HVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
            V  ++ G  HV  L S   VYTWGKG  G LGHGD  D+  P  + SLK
Sbjct: 620 FVEEIACGAYHVAVLTSRTEVYTWGKGSNGRLGHGDADDRNSPTLVESLK 669



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 71/218 (32%), Positives = 106/218 (48%), Gaps = 20/218 (9%)

Query: 271 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 330
           V  IA G  + + VT  G  +S+G  S   LGHG   +   P+ I       I +V  + 
Sbjct: 348 VQNIACGGQHAVLVTKQGESFSWGEESEGRLGHGVDSNVQHPKLIDALNTTNIELV--AC 405

Query: 331 GDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKS--HLAVQVCARKRKTF 388
           G+ H  A+  SG +YTWGKG  G LGHG+E+   +P+ ++ L    H++   C     T 
Sbjct: 406 GEYHSCAVTLSGDLYTWGKGDFGILGHGNEVSHWVPKRVNFLMEGIHVSSIACG-PYHTA 464

Query: 389 VLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTD- 447
           V+   G ++ FG   FG LG  DR     V  PR +DSL+     + + G++HT  V + 
Sbjct: 465 VVTSAGQLFTFGDGTFGVLGHGDR---KSVFIPREVDSLKGLRTVRAACGVWHTAAVVEV 521

Query: 448 -----------RGRLFGFGDNERAQLGHDTLRGCLEPT 474
                       G+LF +GD ++++LGH      L PT
Sbjct: 522 MVGSSSSSNCSSGKLFTWGDGDKSRLGHGDKEPKLVPT 559



 Score = 88.6 bits (218), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 77/294 (26%), Positives = 132/294 (44%), Gaps = 25/294 (8%)

Query: 207 PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 266
           P+ +E+   +  + +  G      +T +G   + G  + G+LGHG   +   PK I  L 
Sbjct: 337 PKALESTIVLDVQNIACGGQHAVLVTKQGESFSWGEESEGRLGHGVDSNVQHPKLIDALN 396

Query: 267 EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVV 326
              ++  +A G  +  AVT +G +Y++G G    LGHG +     P+ +  F  +GIHV 
Sbjct: 397 TT-NIELVACGEYHSCAVTLSGDLYTWGKGDFGILGHGNEVSHWVPKRVN-FLMEGIHVS 454

Query: 327 RVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRK 386
            ++ G  H   + S+G ++T+G G  G LGHGD     +P  + SLK    V+       
Sbjct: 455 SIACGPYHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVFIPREVDSLKGLRTVRAACGVWH 514

Query: 387 TFVLVDT------------GSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQ 434
           T  +V+             G ++ +G      LG  D+   +  L P  + +L   +  Q
Sbjct: 515 TAAVVEVMVGSSSSSNCSSGKLFTWGDGDKSRLGHGDK---EPKLVPTCVAALVEPNFCQ 571

Query: 435 ISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI-------FIQEM 481
           ++ G   TV +T  G ++  G     QLG+    G + PT +       F++E+
Sbjct: 572 VACGHSLTVALTTSGHVYTMGSPVYGQLGNPHADGKV-PTRVDGKLHKSFVEEI 624



 Score = 81.6 bits (200), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 67/224 (29%), Positives = 102/224 (45%), Gaps = 16/224 (7%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           I  G YHT +++++  +F+ G    GVLGHG   +  +    ++       V+ +    H
Sbjct: 456 IACGPYHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVFIP-REVDSLKGLRTVRAACGVWH 514

Query: 175 AAFVLQ------------SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 222
            A V++            SG++FT GD      GH D   P   P  V AL      QV 
Sbjct: 515 TAAVVEVMVGSSSSSNCSSGKLFTWGDGDKSRLGHGD-KEPKLVPTCVAALVEPNFCQVA 573

Query: 223 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 282
            G + T  LT  GHV+T GS  +GQLG+    D   P  +        V +IA G  ++ 
Sbjct: 574 CGHSLTVALTTSGHVYTMGSPVYGQLGNPHA-DGKVPTRVDGKLHKSFVEEIACGAYHVA 632

Query: 283 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVV 326
            +T    VY++G GSN  LGHG+  D   P  +++ + K +  +
Sbjct: 633 VLTSRTEVYTWGKGSNGRLGHGDADDRNSPTLVESLKDKQVKSI 676



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 52/171 (30%), Positives = 85/171 (49%), Gaps = 4/171 (2%)

Query: 306 QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTL 365
           + D L P+A+++     + V  ++ G +H V +   G  ++WG+   G LGHG + +   
Sbjct: 331 KMDSLLPKALES--TIVLDVQNIACGGQHAVLVTKQGESFSWGEESEGRLGHGVDSNVQH 388

Query: 366 PEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILD 425
           P+ + +L +     V   +  +  +  +G +Y +G   FG LG  +  VS  V + R+  
Sbjct: 389 PKLIDALNTTNIELVACGEYHSCAVTLSGDLYTWGKGDFGILGHGNE-VSHWVPK-RVNF 446

Query: 426 SLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 476
            +   HVS I+ G YHT VVT  G+LF FGD     LGH   +    P E+
Sbjct: 447 LMEGIHVSSIACGPYHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVFIPREV 497


>gi|191961780|ref|NP_001122122.1| HECT and RLD domain containing E3 ubiquitin protein ligase 4
           [Xenopus (Silurana) tropicalis]
 gi|189441713|gb|AAI67508.1| LOC100036667 protein [Xenopus (Silurana) tropicalis]
          Length = 1049

 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 101/311 (32%), Positives = 148/311 (47%), Gaps = 12/311 (3%)

Query: 156 RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 215
           R +F    +V  V     H  FVL  G V+TCG N     GH  + R   +P  V AL  
Sbjct: 27  RCDFFINKNVRDVGCGSRHTVFVLDDGTVYTCGCNDLGQLGHDKSRR---KPEQVGALDA 83

Query: 216 VPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDR-PTPKSIAPLEEVGSVVQI 274
                V+ G   T  L  +G V + G   +GQ+G     +    P++I  L +V  +VQ+
Sbjct: 84  QIIVAVSCGEAHTLALNDKGQVFSWGHAVYGQIGLSTAEEYIRVPRNIKSLSDV-QIVQV 142

Query: 275 AAGPSYMLAVTGNGVVYSFGSGSNFCLGHG-EQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           A G  + LA++ +  ++S+G      LG G E   E  PR I++    GI    ++AG  
Sbjct: 143 ACGHHHSLALSKDSDIFSWGQNQYGQLGLGLEIKKECAPRHIKSL--SGIPFAHIAAGGG 200

Query: 334 HVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDT 393
           H  AL  SG ++ WG+   G LG  DE D+ +P  L SL+S   + +C  +  T  L   
Sbjct: 201 HSFALTISGAIFGWGRNKFGQLGLTDETDRNVPALLKSLRSQKIIHICCGEDHTAALTKE 260

Query: 394 GSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV-VTDRGRLF 452
           G V+ FG  G+G LG      ++  + PR +  L    V+QI+ G  HT+  V   GR++
Sbjct: 261 GGVFTFGAGGYGQLG---HNSTNHEVNPRKVFELMGSIVTQIACGRQHTLAFVPSSGRIY 317

Query: 453 GFGDNERAQLG 463
            FG     QLG
Sbjct: 318 SFGLGGNGQLG 328



 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 82/276 (29%), Positives = 135/276 (48%), Gaps = 10/276 (3%)

Query: 204 IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 263
           +  PR  +       + V  G   T F+   G V+TCG N  GQLGH  +  R  P+ + 
Sbjct: 22  VLEPRRCDFFINKNVRDVGCGSRHTVFVLDDGTVYTCGCNDLGQLGHDKS--RRKPEQVG 79

Query: 264 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQ-PRAIQTFRRKG 322
            L+    +V ++ G ++ LA+   G V+S+G      +G     + ++ PR I++     
Sbjct: 80  ALD-AQIIVAVSCGEAHTLALNDKGQVFSWGHAVYGQIGLSTAEEYIRVPRNIKSL--SD 136

Query: 323 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTL-PEPLSSLKSHLAVQVC 381
           + +V+V+ G  H +AL     +++WG+   G LG G EI K   P  + SL       + 
Sbjct: 137 VQIVQVACGHHHSLALSKDSDIFSWGQNQYGQLGLGLEIKKECAPRHIKSLSGIPFAHIA 196

Query: 382 ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYH 441
           A    +F L  +G+++G+G   FG LG  D   +D+ + P +L SLR+  +  I  G  H
Sbjct: 197 AGGGHSFALTISGAIFGWGRNKFGQLGLTDE--TDRNV-PALLKSLRSQKIIHICCGEDH 253

Query: 442 TVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF 477
           T  +T  G +F FG     QLGH++    + P ++F
Sbjct: 254 TAALTKEGGVFTFGAGGYGQLGHNSTNHEVNPRKVF 289



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 75/253 (29%), Positives = 121/253 (47%), Gaps = 5/253 (1%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           ++ G  HTL +++   VFS G ++ G +G             I   S   +VQV+   +H
Sbjct: 89  VSCGEAHTLALNDKGQVFSWGHAVYGQIGLSTAEEYIRVPRNIKSLSDVQIVQVACGHHH 148

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 234
           +  + +   +F+ G N     G     +    PR +++L G+P   + AG   +  LTI 
Sbjct: 149 SLALSKDSDIFSWGQNQYGQLGLGLEIKKECAPRHIKSLSGIPFAHIAAGGGHSFALTIS 208

Query: 235 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 294
           G +   G N  GQLG  D  DR  P  +  L     ++ I  G  +  A+T  G V++FG
Sbjct: 209 GAIFGWGRNKFGQLGLTDETDRNVPALLKSLRS-QKIIHICCGEDHTAALTKEGGVFTFG 267

Query: 295 SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA-LDSSGYVYTWGKGYCG 353
           +G    LGH   + E+ PR +  F   G  V +++ G +H +A + SSG +Y++G G  G
Sbjct: 268 AGGYGQLGHNSTNHEVNPRKV--FELMGSIVTQIACGRQHTLAFVPSSGRIYSFGLGGNG 325

Query: 354 ALGHGDEIDKTLP 366
            LG G  I++  P
Sbjct: 326 QLGTGSTINRKSP 338



 Score =  101 bits (251), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 79/291 (27%), Positives = 132/291 (45%), Gaps = 8/291 (2%)

Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 179
           R+   ++ + +V++CG +  G LGH     +     ++    A  +V VS  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHDKSRRKP---EQVGALDAQIIVAVSCGEAHTLALN 100

Query: 180 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 239
             GQVF+ G       G       I  PR +++L  V   QV  G + +  L+    + +
Sbjct: 101 DKGQVFSWGHAVYGQIGLSTAEEYIRVPRNIKSLSDVQIVQVACGHHHSLALSKDSDIFS 160

Query: 240 CGSNTHGQLGHGDTLDRP-TPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
            G N +GQLG G  + +   P+ I  L  +     IAAG  +  A+T +G ++ +G    
Sbjct: 161 WGQNQYGQLGLGLEIKKECAPRHIKSLSGI-PFAHIAAGGGHSFALTISGAIFGWGRNKF 219

Query: 299 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 358
             LG  ++ D   P  +++ R + I  + +  G++H  AL   G V+T+G G  G LGH 
Sbjct: 220 GQLGLTDETDRNVPALLKSLRSQKI--IHICCGEDHTAALTKEGGVFTFGAGGYGQLGHN 277

Query: 359 DEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLG 408
               +  P  +  L   +  Q+ C R+     +  +G +Y FG  G G LG
Sbjct: 278 STNHEVNPRKVFELMGSIVTQIACGRQHTLAFVPSSGRIYSFGLGGNGQLG 328



 Score = 79.0 bits (193), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 67/207 (32%), Positives = 102/207 (49%), Gaps = 8/207 (3%)

Query: 114 MQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +Q+  G +H+L +S +S +FS G +  G LG G E  +  +   I   S      ++A  
Sbjct: 140 VQVACGHHHSLALSKDSDIFSWGQNQYGQLGLGLEIKKECAPRHIKSLSGIPFAHIAAGG 199

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRD-TNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
            H+  +  SG +F  G N     G  D T+R +  P L+++L+      +  G + T  L
Sbjct: 200 GHSFALTISGAIFGWGRNKFGQLGLTDETDRNV--PALLKSLRSQKIIHICCGEDHTAAL 257

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGV 289
           T  G V T G+  +GQLGH  T     P+ +   E +GS+V QIA G  + LA V  +G 
Sbjct: 258 TKEGGVFTFGAGGYGQLGHNSTNHEVNPRKV--FELMGSIVTQIACGRQHTLAFVPSSGR 315

Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAIQ 316
           +YSFG G N  LG G   +   P  ++
Sbjct: 316 IYSFGLGGNGQLGTGSTINRKSPFTVK 342


>gi|24659266|gb|AAH38960.1| HERC3 protein [Homo sapiens]
          Length = 368

 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 99/307 (32%), Positives = 150/307 (48%), Gaps = 19/307 (6%)

Query: 193 FCCGHRDTNRP---------IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 243
            C G+    +P         +  P++   +     K+V  G N + FL   G V+TCG N
Sbjct: 2   LCWGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLN 61

Query: 244 THGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH 303
           T GQLGH    ++P  + I  L +   ++ +A G S+ LA++  G ++S+G+GS+  LG 
Sbjct: 62  TKGQLGHEREGNKP--EQIGALADQ-HIIHVACGESHSLALSDRGQLFSWGAGSDGQLGL 118

Query: 304 GEQHDELQ-PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEI- 361
               D +  PR IQ   ++ I  ++VS G+ H +AL + G  +TWGK   G LG G E  
Sbjct: 119 MTTEDSVAVPRLIQKLNQQTI--LQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFP 176

Query: 362 DKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRP 421
            +  P+ + SL+     QV A    +F L  +G+V+G+G    G LG  D    +    P
Sbjct: 177 SQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRES---P 233

Query: 422 RILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQEM 481
             +  LR   V  IS G  HT V+T  G +F FG     QLGHD++   + P  +     
Sbjct: 234 CHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMG 293

Query: 482 EEDTGLA 488
            E T +A
Sbjct: 294 SEVTQIA 300



 Score =  127 bits (319), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 100/324 (30%), Positives = 162/324 (50%), Gaps = 14/324 (4%)

Query: 159 FPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPC 218
           F S   V +V+   NH+ F+L+ G+V+TCG N+    GH    R   +P  + AL     
Sbjct: 30  FISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHE---REGNKPEQIGALADQHI 86

Query: 219 KQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDR-PTPKSIAPLEEVGSVVQIAAG 277
             V  G + +  L+ RG + + G+ + GQLG   T D    P+ I  L +  +++Q++ G
Sbjct: 87  IHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQ-TILQVSCG 145

Query: 278 PSYMLAVTGNGVVYSFGSGSNFCLGHGEQH-DELQPRAIQTFRRKGIHVVRVSAGDEHVV 336
             + LA+  +G  +++G  S+  LG G++   +  P+ +++   +GI + +V+AG  H  
Sbjct: 146 NWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSL--EGIPLAQVAAGGAHSF 203

Query: 337 ALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSV 396
           AL  SG V+ WG    G LG  DE D+  P  +  L++   V +   +  T VL  +G V
Sbjct: 204 ALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGV 263

Query: 397 YGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV-VTDRGRLFGFG 455
           + FG    G LG     ++D+V  PR +  L    V+QI+ G  HT+  V   G ++ FG
Sbjct: 264 FTFGAGSCGQLGHDS--MNDEV-NPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFG 320

Query: 456 DNERAQL--GHDTLRGCLEPTEIF 477
              R QL  GH     C  P + +
Sbjct: 321 CGARGQLGTGHTCNVKCPSPVKGY 344



 Score =  125 bits (313), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 94/321 (29%), Positives = 150/321 (46%), Gaps = 11/321 (3%)

Query: 119 GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
           G +   L+ +  V++CG +  G LGH  E  +     +I   +  H++ V+  E+H+  +
Sbjct: 43  GNHSVFLLEDGEVYTCGLNTKGQLGHEREGNK---PEQIGALADQHIIHVACGESHSLAL 99

Query: 179 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVH 238
              GQ+F+ G  S    G   T   +  PRL++ L      QV+ G      L   G   
Sbjct: 100 SDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFF 159

Query: 239 TCGSNTHGQLGHGDTL-DRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 297
           T G N+HGQLG G     + +P+ +  LE +  + Q+AAG ++  A++ +G V+ +G  +
Sbjct: 160 TWGKNSHGQLGLGKEFPSQASPQRVRSLEGI-PLAQVAAGGAHSFALSLSGAVFGWGMNN 218

Query: 298 NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 357
              LG  ++ D   P  ++  R +   VV +S G+EH   L  SG V+T+G G CG LGH
Sbjct: 219 AGQLGLSDEKDRESPCHVKLLRTQ--KVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGH 276

Query: 358 GDEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSD 416
               D+  P  +  L      Q+ C R+     +  +G +Y FG    G LG    G + 
Sbjct: 277 DSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLG---TGHTC 333

Query: 417 KVLRPRILDSLRAHHVSQIST 437
            V  P  +    A H  Q+S 
Sbjct: 334 NVKCPSPVKGYWAAHSGQLSA 354



 Score =  108 bits (269), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 89/282 (31%), Positives = 134/282 (47%), Gaps = 7/282 (2%)

Query: 114 MQITTGRYHTLLISN-SSVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSAS 171
           + +  G  H+L +S+   +FS G+   G LG    T   V+  R I   +   ++QVS  
Sbjct: 87  IHVACGESHSLALSDRGQLFSWGAGSDGQLGL-MTTEDSVAVPRLIQKLNQQTILQVSCG 145

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
             H   +   GQ FT G NS    G          P+ V +L+G+P  QV AG   +  L
Sbjct: 146 NWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFAL 205

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
           ++ G V   G N  GQLG  D  DR +P  +  L     VV I+ G  +   +T +G V+
Sbjct: 206 SLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLR-TQKVVYISCGEEHTAVLTKSGGVF 264

Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA-LDSSGYVYTWGKG 350
           +FG+GS   LGH   +DE+ PR +      G  V +++ G +H +A + SSG +Y +G G
Sbjct: 265 TFGAGSCGQLGHDSMNDEVNPRRV--LELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCG 322

Query: 351 YCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVD 392
             G LG G   +   P P+    +  + Q+ AR  K   L +
Sbjct: 323 ARGQLGTGHTCNVKCPSPVKGYWAAHSGQLSARAGKNDCLWN 364


>gi|63995563|gb|AAY41038.1| unknown [Homo sapiens]
          Length = 382

 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 99/307 (32%), Positives = 150/307 (48%), Gaps = 19/307 (6%)

Query: 193 FCCGHRDTNRP---------IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 243
            C G+    +P         +  P++   +     K+V  G N + FL   G V+TCG N
Sbjct: 2   LCWGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLN 61

Query: 244 THGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH 303
           T GQLGH    ++P  + I  L +   ++ +A G S+ LA++  G ++S+G+GS+  LG 
Sbjct: 62  TKGQLGHEREGNKP--EQIGALADQ-HIIHVACGESHSLALSDRGQLFSWGAGSDGQLGL 118

Query: 304 GEQHDELQ-PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEI- 361
               D +  PR IQ   ++ I  ++VS G+ H +AL + G  +TWGK   G LG G E  
Sbjct: 119 MTTEDSVAVPRLIQKLNQQTI--LQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFP 176

Query: 362 DKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRP 421
            +  P+ + SL+     QV A    +F L  +G+V+G+G    G LG  D    +    P
Sbjct: 177 SQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRES---P 233

Query: 422 RILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQEM 481
             +  LR   V  IS G  HT V+T  G +F FG     QLGHD++   + P  +     
Sbjct: 234 CHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMG 293

Query: 482 EEDTGLA 488
            E T +A
Sbjct: 294 SEVTQIA 300



 Score =  127 bits (318), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 98/309 (31%), Positives = 159/309 (51%), Gaps = 14/309 (4%)

Query: 159 FPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVP 217
           F S   V +V+   NH+ F+L+ G+V+TCG N+    GH R+ N+P      + AL    
Sbjct: 30  FISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGNKP----EQIGALADQH 85

Query: 218 CKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDR-PTPKSIAPLEEVGSVVQIAA 276
              V  G + +  L+ RG + + G+ + GQLG   T D    P+ I  L +  +++Q++ 
Sbjct: 86  IIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQ-TILQVSC 144

Query: 277 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH-DELQPRAIQTFRRKGIHVVRVSAGDEHV 335
           G  + LA+  +G  +++G  S+  LG G++   +  P+ +++   +GI + +V+AG  H 
Sbjct: 145 GNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSL--EGIPLAQVAAGGAHS 202

Query: 336 VALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGS 395
            AL  SG V+ WG    G LG  DE D+  P  +  L++   V +   +  T VL  +G 
Sbjct: 203 FALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGG 262

Query: 396 VYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV-VTDRGRLFGF 454
           V+ FG    G LG     ++D+V  PR +  L    V+QI+ G  HT+  V   G ++ F
Sbjct: 263 VFTFGAGSCGQLGHDS--MNDEV-NPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAF 319

Query: 455 GDNERAQLG 463
           G   R QLG
Sbjct: 320 GCGARGQLG 328



 Score =  125 bits (313), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 94/321 (29%), Positives = 150/321 (46%), Gaps = 11/321 (3%)

Query: 119 GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
           G +   L+ +  V++CG +  G LGH  E  +     +I   +  H++ V+  E+H+  +
Sbjct: 43  GNHSVFLLEDGEVYTCGLNTKGQLGHEREGNK---PEQIGALADQHIIHVACGESHSLAL 99

Query: 179 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVH 238
              GQ+F+ G  S    G   T   +  PRL++ L      QV+ G      L   G   
Sbjct: 100 SDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFF 159

Query: 239 TCGSNTHGQLGHGDTL-DRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 297
           T G N+HGQLG G     + +P+ +  LE +  + Q+AAG ++  A++ +G V+ +G  +
Sbjct: 160 TWGKNSHGQLGLGKEFPSQASPQRVRSLEGI-PLAQVAAGGAHSFALSLSGAVFGWGMNN 218

Query: 298 NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 357
              LG  ++ D   P  ++  R +   VV +S G+EH   L  SG V+T+G G CG LGH
Sbjct: 219 AGQLGLSDEKDRESPCHVKLLRTQ--KVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGH 276

Query: 358 GDEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSD 416
               D+  P  +  L      Q+ C R+     +  +G +Y FG    G LG    G + 
Sbjct: 277 DSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLG---TGHTC 333

Query: 417 KVLRPRILDSLRAHHVSQIST 437
            V  P  +    A H  Q+S 
Sbjct: 334 NVKCPSPVKGYWAAHSGQLSA 354



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 91/295 (30%), Positives = 136/295 (46%), Gaps = 22/295 (7%)

Query: 114 MQITTGRYHTLLISN-SSVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSAS 171
           + +  G  H+L +S+   +FS G+   G LG    T   V+  R I   +   ++QVS  
Sbjct: 87  IHVACGESHSLALSDRGQLFSWGAGSDGQLGL-MTTEDSVAVPRLIQKLNQQTILQVSCG 145

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
             H   +   GQ FT G NS    G          P+ V +L+G+P  QV AG   +  L
Sbjct: 146 NWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFAL 205

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
           ++ G V   G N  GQLG  D  DR +P  +  L     VV I+ G  +   +T +G V+
Sbjct: 206 SLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLR-TQKVVYISCGEEHTAVLTKSGGVF 264

Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA-LDSSGYVYTWGKG 350
           +FG+GS   LGH   +DE+ PR +      G  V +++ G +H +A + SSG +Y +G G
Sbjct: 265 TFGAGSCGQLGHDSMNDEVNPRRV--LELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCG 322

Query: 351 YCGALGHGDEIDKTLPEPLSS---------------LKSHLAVQVCARKRKTFVL 390
             G LG G   +   P P+                  K H+  Q+ +   +TFVL
Sbjct: 323 ARGQLGTGHTCNVKCPSPVKGYWAAHSGQLSARADRFKYHIVKQIFSGGDQTFVL 377


>gi|344284757|ref|XP_003414131.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 [Loxodonta
           africana]
          Length = 1050

 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 97/301 (32%), Positives = 147/301 (48%), Gaps = 29/301 (9%)

Query: 193 FCCGHRDTNRP---------IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 243
            C G+    +P         +  P++   +     K+V  G N + FL   G V+TCG N
Sbjct: 2   LCWGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLN 61

Query: 244 THGQLGHGDTLDRPTPKSIAPLEEVGS-----VVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
           T GQLGH    ++P        E++G+     +V +A G S+ LA++  G ++S+G+GS+
Sbjct: 62  TKGQLGHEREGNKP--------EQIGALADQHIVHVACGESHSLALSDRGQLFSWGAGSD 113

Query: 299 FCLGHGEQHDELQ-PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 357
             LG     D +  PR IQ   ++ I  ++VS G+ H +AL + G  +TWGK   G LG 
Sbjct: 114 GQLGLMTTEDSVAVPRLIQKLNQQTI--LQVSCGNWHCLALAADGQFFTWGKNSHGQLGL 171

Query: 358 GDEI-DKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSD 416
           G E   +  P+ + SL+     QV A    +F L  +G+V+G+G    G LG  D    +
Sbjct: 172 GKEFPSQASPQRVRSLEGIPLAQVTAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRE 231

Query: 417 KVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 476
               P  +  LR   V  IS G  HT V+T  G +F FG     QLGHD++   + P  +
Sbjct: 232 S---PCHVKLLRTQKVVYISCGEEHTAVLTKNGGVFTFGAGSCGQLGHDSMNDEVNPRRV 288

Query: 477 F 477
            
Sbjct: 289 L 289



 Score =  126 bits (316), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 98/309 (31%), Positives = 158/309 (51%), Gaps = 14/309 (4%)

Query: 159 FPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVP 217
           F S   V +V+   NH+ F+L+ G+V+TCG N+    GH R+ N+P      + AL    
Sbjct: 30  FISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGNKP----EQIGALADQH 85

Query: 218 CKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDR-PTPKSIAPLEEVGSVVQIAA 276
              V  G + +  L+ RG + + G+ + GQLG   T D    P+ I  L +  +++Q++ 
Sbjct: 86  IVHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQ-QTILQVSC 144

Query: 277 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH-DELQPRAIQTFRRKGIHVVRVSAGDEHV 335
           G  + LA+  +G  +++G  S+  LG G++   +  P+ +++   +GI + +V+AG  H 
Sbjct: 145 GNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSL--EGIPLAQVTAGGAHS 202

Query: 336 VALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGS 395
            AL  SG V+ WG    G LG  DE D+  P  +  L++   V +   +  T VL   G 
Sbjct: 203 FALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKNGG 262

Query: 396 VYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV-VTDRGRLFGF 454
           V+ FG    G LG     ++D+V  PR +  L    V+QI+ G  HT+  V   G ++ F
Sbjct: 263 VFTFGAGSCGQLG--HDSMNDEV-NPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAF 319

Query: 455 GDNERAQLG 463
           G   R QLG
Sbjct: 320 GCGARGQLG 328



 Score =  121 bits (303), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 93/320 (29%), Positives = 149/320 (46%), Gaps = 11/320 (3%)

Query: 119 GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
           G +   L+ +  V++CG +  G LGH  E  +     +I   +  H+V V+  E+H+  +
Sbjct: 43  GNHSVFLLEDGEVYTCGLNTKGQLGHEREGNKP---EQIGALADQHIVHVACGESHSLAL 99

Query: 179 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVH 238
              GQ+F+ G  S    G   T   +  PRL++ L      QV+ G      L   G   
Sbjct: 100 SDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFF 159

Query: 239 TCGSNTHGQLGHGDTL-DRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 297
           T G N+HGQLG G     + +P+ +  LE +  + Q+ AG ++  A++ +G V+ +G  +
Sbjct: 160 TWGKNSHGQLGLGKEFPSQASPQRVRSLEGI-PLAQVTAGGAHSFALSLSGAVFGWGMNN 218

Query: 298 NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 357
              LG  ++ D   P  ++  R +   VV +S G+EH   L  +G V+T+G G CG LGH
Sbjct: 219 AGQLGLSDEKDRESPCHVKLLRTQ--KVVYISCGEEHTAVLTKNGGVFTFGAGSCGQLGH 276

Query: 358 GDEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSD 416
               D+  P  +  L      Q+ C R+     +  +G +Y FG    G LG    G + 
Sbjct: 277 DSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLG---TGHTC 333

Query: 417 KVLRPRILDSLRAHHVSQIS 436
            V  P  +    A H  Q+S
Sbjct: 334 NVKCPSPVKGYWAAHSGQLS 353



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 93/295 (31%), Positives = 137/295 (46%), Gaps = 22/295 (7%)

Query: 114 MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSAS 171
           + +  G  H+L +S+   +FS G+   G LG    T   V+  R I   +   ++QVS  
Sbjct: 87  VHVACGESHSLALSDRGQLFSWGAGSDGQLGLM-TTEDSVAVPRLIQKLNQQTILQVSCG 145

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
             H   +   GQ FT G NS    G          P+ V +L+G+P  QVTAG   +  L
Sbjct: 146 NWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVTAGGAHSFAL 205

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
           ++ G V   G N  GQLG  D  DR +P  +  L     VV I+ G  +   +T NG V+
Sbjct: 206 SLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLR-TQKVVYISCGEEHTAVLTKNGGVF 264

Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA-LDSSGYVYTWGKG 350
           +FG+GS   LGH   +DE+ PR +      G  V +++ G +H +A + SSG +Y +G G
Sbjct: 265 TFGAGSCGQLGHDSMNDEVNPRRV--LELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCG 322

Query: 351 YCGALGHGDEIDKTLPEPLS---------------SLKSHLAVQVCARKRKTFVL 390
             G LG G   +   P P+                  K H+  Q+ +   +TFVL
Sbjct: 323 ARGQLGTGHTCNVKCPSPVKGYWAAHSGQLSARADRFKYHIVKQIFSGGDQTFVL 377


>gi|301755552|ref|XP_002913643.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3-like
           [Ailuropoda melanoleuca]
          Length = 1129

 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 97/301 (32%), Positives = 147/301 (48%), Gaps = 29/301 (9%)

Query: 193 FCCGHRDTNRP---------IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 243
            C G+    +P         +  P++   +     K+V  G N + FL   G V+TCG N
Sbjct: 81  LCWGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLN 140

Query: 244 THGQLGHGDTLDRPTPKSIAPLEEVGS-----VVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
           T GQLGH    ++P        E++G+     +V +A G S+ LA++  G ++S+G+GS+
Sbjct: 141 TKGQLGHEREGNKP--------EQIGALADQHIVHVACGESHSLALSDRGQLFSWGAGSD 192

Query: 299 FCLGHGEQHDELQ-PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 357
             LG     D +  PR IQ   ++ I  ++VS G+ H +AL + G  +TWGK   G LG 
Sbjct: 193 GQLGLMTTEDSVAVPRLIQKLNQQTI--LQVSCGNWHCLALAADGQFFTWGKNSHGQLGL 250

Query: 358 GDEI-DKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSD 416
           G E   +  P+ + SL+     QV A    +F L  +G+V+G+G    G LG  D    +
Sbjct: 251 GKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEEDRE 310

Query: 417 KVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 476
               P  +  LR   V  IS G  HT V+T  G +F FG     QLGHD++   + P  +
Sbjct: 311 S---PCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRV 367

Query: 477 F 477
            
Sbjct: 368 L 368



 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 98/309 (31%), Positives = 159/309 (51%), Gaps = 14/309 (4%)

Query: 159 FPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVP 217
           F S   V +V+   NH+ F+L+ G+V+TCG N+    GH R+ N+P      + AL    
Sbjct: 109 FISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGNKP----EQIGALADQH 164

Query: 218 CKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDR-PTPKSIAPLEEVGSVVQIAA 276
              V  G + +  L+ RG + + G+ + GQLG   T D    P+ I  L +  +++Q++ 
Sbjct: 165 IVHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQ-QTILQVSC 223

Query: 277 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH-DELQPRAIQTFRRKGIHVVRVSAGDEHV 335
           G  + LA+  +G  +++G  S+  LG G++   +  P+ +++   +GI + +V+AG  H 
Sbjct: 224 GNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSL--EGIPLAQVAAGGAHS 281

Query: 336 VALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGS 395
            AL  SG V+ WG    G LG  DE D+  P  +  L++   V +   +  T VL  +G 
Sbjct: 282 FALSLSGAVFGWGMNNAGQLGLSDEEDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGG 341

Query: 396 VYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV-VTDRGRLFGF 454
           V+ FG    G LG     ++D+V  PR +  L    V+QI+ G  HT+  V   G ++ F
Sbjct: 342 VFTFGAGSCGQLG--HDSMNDEV-NPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAF 398

Query: 455 GDNERAQLG 463
           G   R QLG
Sbjct: 399 GCGARGQLG 407



 Score =  125 bits (313), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 95/320 (29%), Positives = 150/320 (46%), Gaps = 11/320 (3%)

Query: 119 GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
           G +   L+ +  V++CG +  G LGH  E  +     +I   +  H+V V+  E+H+  +
Sbjct: 122 GNHSVFLLEDGEVYTCGLNTKGQLGHEREGNKP---EQIGALADQHIVHVACGESHSLAL 178

Query: 179 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVH 238
              GQ+F+ G  S    G   T   +  PRL++ L      QV+ G      L   G   
Sbjct: 179 SDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFF 238

Query: 239 TCGSNTHGQLGHGDTL-DRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 297
           T G N+HGQLG G     + +P+ +  LE +  + Q+AAG ++  A++ +G V+ +G  +
Sbjct: 239 TWGKNSHGQLGLGKEFPSQASPQRVRSLEGI-PLAQVAAGGAHSFALSLSGAVFGWGMNN 297

Query: 298 NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 357
              LG  ++ D   P  ++  R +   VV +S G+EH   L  SG V+T+G G CG LGH
Sbjct: 298 AGQLGLSDEEDRESPCHVKLLRTQ--KVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGH 355

Query: 358 GDEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSD 416
               D+  P  +  L      Q+ C R+     +  +G +Y FG    G LG    G + 
Sbjct: 356 DSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLG---TGHTC 412

Query: 417 KVLRPRILDSLRAHHVSQIS 436
            V  P  +    A H  Q+S
Sbjct: 413 NVKCPSPVKGYWAAHSGQLS 432



 Score =  106 bits (265), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 91/295 (30%), Positives = 136/295 (46%), Gaps = 22/295 (7%)

Query: 114 MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSAS 171
           + +  G  H+L +S+   +FS G+   G LG    T   V+  R I   +   ++QVS  
Sbjct: 166 VHVACGESHSLALSDRGQLFSWGAGSDGQLGLM-TTEDSVAVPRLIQKLNQQTILQVSCG 224

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
             H   +   GQ FT G NS    G          P+ V +L+G+P  QV AG   +  L
Sbjct: 225 NWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFAL 284

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
           ++ G V   G N  GQLG  D  DR +P  +  L     VV I+ G  +   +T +G V+
Sbjct: 285 SLSGAVFGWGMNNAGQLGLSDEEDRESPCHVK-LLRTQKVVYISCGEEHTAVLTKSGGVF 343

Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA-LDSSGYVYTWGKG 350
           +FG+GS   LGH   +DE+ PR +      G  V +++ G +H +A + SSG +Y +G G
Sbjct: 344 TFGAGSCGQLGHDSMNDEVNPRRV--LELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCG 401

Query: 351 YCGALGHGDEIDKTLPEPLS---------------SLKSHLAVQVCARKRKTFVL 390
             G LG G   +   P P+                  K H+  Q+ +   +TFVL
Sbjct: 402 ARGQLGTGHTCNVKCPSPVKGYWAAHSGQLSARADRFKYHIVKQIFSGGDQTFVL 456


>gi|297807279|ref|XP_002871523.1| ran GTPase binding protein [Arabidopsis lyrata subsp. lyrata]
 gi|297317360|gb|EFH47782.1| ran GTPase binding protein [Arabidopsis lyrata subsp. lyrata]
          Length = 1075

 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 100/323 (30%), Positives = 152/323 (47%), Gaps = 20/323 (6%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVPCKQVTA 223
           V  ++    HA  V + G+ F+ G+ S    GH  D+N  I +P+L++AL     + V  
Sbjct: 310 VQNIACGGQHAVLVTKQGESFSWGEESEGRLGHGVDSN--IQQPKLIDALNTTNIELVAC 367

Query: 224 GLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
           G   +  +T+ G ++T G    G LGHG+ +    PK +  L E   V  IA GP +   
Sbjct: 368 GEFHSCAVTLSGDLYTWGKGDFGVLGHGNEVSHWVPKRVNFLLEGIHVSSIACGPYHTAV 427

Query: 284 VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL----- 338
           VT  G +++FG G+   LGHG++     PR + +   KG+  VR + G  H  A+     
Sbjct: 428 VTSAGQLFTFGDGTFGVLGHGDKKSVFIPREVDSL--KGLRTVRAACGVWHTAAVVEVMV 485

Query: 339 -------DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 391
                   SSG ++TWG G  G LGHG++  K +P  +++L      QV      T  L 
Sbjct: 486 GSSSSSNCSSGKLFTWGDGDKGRLGHGNKEPKLVPTCVAALVEPNFCQVACGHSLTVALT 545

Query: 392 DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRL 451
            +G VY  G   +G LG      +D  L  R+   L    V +I+ G YH  V+T R  +
Sbjct: 546 TSGHVYTMGSPVYGQLG---NSHADGKLPNRVEGKLHKSFVEEIACGAYHVAVLTSRTEV 602

Query: 452 FGFGDNERAQLGHDTLRGCLEPT 474
           + +G     +LGH  +     PT
Sbjct: 603 YTWGKGSNGRLGHGDVDDRNSPT 625



 Score =  114 bits (286), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 90/272 (33%), Positives = 132/272 (48%), Gaps = 19/272 (6%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFP-SAAHVVQVSASEN 173
           +  G +H+  ++ S  +++ G    GVLGHG E +  V   R+NF     HV  ++    
Sbjct: 365 VACGEFHSCAVTLSGDLYTWGKGDFGVLGHGNEVSHWVP-KRVNFLLEGIHVSSIACGPY 423

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT- 232
           H A V  +GQ+FT GD +    GH D  + +F PR V++LKG+   +   G+  T  +  
Sbjct: 424 HTAVVTSAGQLFTFGDGTFGVLGHGD-KKSVFIPREVDSLKGLRTVRAACGVWHTAAVVE 482

Query: 233 -----------IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 281
                        G + T G    G+LGHG+   +  P  +A L E  +  Q+A G S  
Sbjct: 483 VMVGSSSSSNCSSGKLFTWGDGDKGRLGHGNKEPKLVPTCVAALVEP-NFCQVACGHSLT 541

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 341
           +A+T +G VY+ GS     LG+     +L P  ++    K   V  ++ G  HV  L S 
Sbjct: 542 VALTTSGHVYTMGSPVYGQLGNSHADGKL-PNRVEGKLHKSF-VEEIACGAYHVAVLTSR 599

Query: 342 GYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
             VYTWGKG  G LGHGD  D+  P  + SLK
Sbjct: 600 TEVYTWGKGSNGRLGHGDVDDRNSPTLVESLK 631



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 75/277 (27%), Positives = 125/277 (45%), Gaps = 17/277 (6%)

Query: 207 PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 266
           P+ +E+   +  + +  G      +T +G   + G  + G+LGHG   +   PK I  L 
Sbjct: 299 PKALESTIVLDVQNIACGGQHAVLVTKQGESFSWGEESEGRLGHGVDSNIQQPKLIDALN 358

Query: 267 EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVV 326
              ++  +A G  +  AVT +G +Y++G G    LGHG +     P+ +  F  +GIHV 
Sbjct: 359 TT-NIELVACGEFHSCAVTLSGDLYTWGKGDFGVLGHGNEVSHWVPKRV-NFLLEGIHVS 416

Query: 327 RVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRK 386
            ++ G  H   + S+G ++T+G G  G LGHGD+    +P  + SLK    V+       
Sbjct: 417 SIACGPYHTAVVTSAGQLFTFGDGTFGVLGHGDKKSVFIPREVDSLKGLRTVRAACGVWH 476

Query: 387 TFVLVDT------------GSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQ 434
           T  +V+             G ++ +G    G LG    G  +  L P  + +L   +  Q
Sbjct: 477 TAAVVEVMVGSSSSSNCSSGKLFTWGDGDKGRLG---HGNKEPKLVPTCVAALVEPNFCQ 533

Query: 435 ISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCL 471
           ++ G   TV +T  G ++  G     QLG+    G L
Sbjct: 534 VACGHSLTVALTTSGHVYTMGSPVYGQLGNSHADGKL 570



 Score = 79.7 bits (195), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 71/248 (28%), Positives = 111/248 (44%), Gaps = 22/248 (8%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           I  G YHT +++++  +F+ G    GVLGHG + +  +    ++       V+ +    H
Sbjct: 418 IACGPYHTAVVTSAGQLFTFGDGTFGVLGHGDKKSVFIP-REVDSLKGLRTVRAACGVWH 476

Query: 175 AAFVLQ------------SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 222
            A V++            SG++FT GD      GH +   P   P  V AL      QV 
Sbjct: 477 TAAVVEVMVGSSSSSNCSSGKLFTWGDGDKGRLGHGN-KEPKLVPTCVAALVEPNFCQVA 535

Query: 223 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 282
            G + T  LT  GHV+T GS  +GQLG+    D   P  +        V +IA G  ++ 
Sbjct: 536 CGHSLTVALTTSGHVYTMGSPVYGQLGNSHA-DGKLPNRVEGKLHKSFVEEIACGAYHVA 594

Query: 283 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
            +T    VY++G GSN  LGHG+  D   P  +++ + K   V  ++ G     A+    
Sbjct: 595 VLTSRTEVYTWGKGSNGRLGHGDVDDRNSPTLVESLKDK--QVKSIACGTNFTAAV---- 648

Query: 343 YVYTWGKG 350
            ++ W  G
Sbjct: 649 CIHRWASG 656



 Score = 71.6 bits (174), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 56/181 (30%), Positives = 90/181 (49%), Gaps = 8/181 (4%)

Query: 296 GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGAL 355
           GS+F +    + D L P+A+++     + V  ++ G +H V +   G  ++WG+   G L
Sbjct: 287 GSSFDM----KMDSLLPKALES--TIVLDVQNIACGGQHAVLVTKQGESFSWGEESEGRL 340

Query: 356 GHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVS 415
           GHG + +   P+ + +L +     V   +  +  +  +G +Y +G   FG LG  +  VS
Sbjct: 341 GHGVDSNIQQPKLIDALNTTNIELVACGEFHSCAVTLSGDLYTWGKGDFGVLGHGNE-VS 399

Query: 416 DKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTE 475
             V + R+   L   HVS I+ G YHT VVT  G+LF FGD     LGH   +    P E
Sbjct: 400 HWVPK-RVNFLLEGIHVSSIACGPYHTAVVTSAGQLFTFGDGTFGVLGHGDKKSVFIPRE 458

Query: 476 I 476
           +
Sbjct: 459 V 459


>gi|229576492|gb|ACQ82636.1| At3g15430-like protein [Solanum quitoense]
 gi|229576494|gb|ACQ82637.1| At3g15430-like protein [Solanum quitoense]
          Length = 91

 Score =  133 bits (334), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 63/90 (70%), Positives = 74/90 (82%)

Query: 24  SGRLSAVDLAHLELTSKTFGGSHGLYPQKFRSLVDLAASQLCALHSIYAGMSRNVQIELL 83
           SGRL+ +DL  LELTS+TF G+HGL+P+KF+SLVD AA QLCAL  IYA +  N Q ELL
Sbjct: 2   SGRLAGIDLISLELTSRTFRGTHGLFPKKFKSLVDYAAFQLCALSPIYASLHCNAQEELL 61

Query: 84  NRCNGNWKRVLRFLQSVEHSSDIVETSAGN 113
            RCN NWKR+LRFLQ+VE SSD+VETSAGN
Sbjct: 62  KRCNDNWKRLLRFLQAVEQSSDMVETSAGN 91


>gi|338723767|ref|XP_001496703.3| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 [Equus
           caballus]
          Length = 1050

 Score =  133 bits (334), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 97/301 (32%), Positives = 147/301 (48%), Gaps = 29/301 (9%)

Query: 193 FCCGHRDTNRP---------IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 243
            C G+    +P         +  P++   +     K+V  G N + FL   G V+TCG N
Sbjct: 2   LCWGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLN 61

Query: 244 THGQLGHGDTLDRPTPKSIAPLEEVGS-----VVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
           T GQLGH    ++P        E++G+     +V +A G S+ LA++  G ++S+G+GS+
Sbjct: 62  TKGQLGHEREGNKP--------EQIGALADQHIVHVACGESHNLALSDRGQLFSWGAGSD 113

Query: 299 FCLGHGEQHDELQ-PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 357
             LG     D +  PR IQ   ++ I  ++VS G+ H +AL + G  +TWGK   G LG 
Sbjct: 114 GQLGLMTTEDAVAVPRVIQKLNQQTI--LQVSCGNWHSLALAADGQFFTWGKNSHGQLGL 171

Query: 358 GDEI-DKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSD 416
           G E   +  P+ + SL+     QV A    +F L  +G+V+G+G    G LG  D    +
Sbjct: 172 GKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEEDRE 231

Query: 417 KVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 476
               P  +  LR   V  IS G  HT V+T  G +F FG     QLGHD++   + P  +
Sbjct: 232 S---PCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRV 288

Query: 477 F 477
            
Sbjct: 289 L 289



 Score =  126 bits (316), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 98/309 (31%), Positives = 158/309 (51%), Gaps = 14/309 (4%)

Query: 159 FPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVP 217
           F S   V +V+   NH+ F+L+ G+V+TCG N+    GH R+ N+P      + AL    
Sbjct: 30  FISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGNKP----EQIGALADQH 85

Query: 218 CKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDR-PTPKSIAPLEEVGSVVQIAA 276
              V  G +    L+ RG + + G+ + GQLG   T D    P+ I  L +  +++Q++ 
Sbjct: 86  IVHVACGESHNLALSDRGQLFSWGAGSDGQLGLMTTEDAVAVPRVIQKLNQ-QTILQVSC 144

Query: 277 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH-DELQPRAIQTFRRKGIHVVRVSAGDEHV 335
           G  + LA+  +G  +++G  S+  LG G++   +  P+ +++   +GI + +V+AG  H 
Sbjct: 145 GNWHSLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSL--EGIPLAQVAAGGAHS 202

Query: 336 VALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGS 395
            AL  SG V+ WG    G LG  DE D+  P  +  L++   V +   +  T VL  +G 
Sbjct: 203 FALSLSGAVFGWGMNNAGQLGLSDEEDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGG 262

Query: 396 VYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV-VTDRGRLFGF 454
           V+ FG    G LG     ++D+V  PR +  L    V+QI+ G  HT+  V   G ++ F
Sbjct: 263 VFTFGAGSCGQLG--HDSMNDEV-NPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAF 319

Query: 455 GDNERAQLG 463
           G   R QLG
Sbjct: 320 GCGARGQLG 328



 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 94/320 (29%), Positives = 150/320 (46%), Gaps = 11/320 (3%)

Query: 119 GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
           G +   L+ +  V++CG +  G LGH  E  +     +I   +  H+V V+  E+H   +
Sbjct: 43  GNHSVFLLEDGEVYTCGLNTKGQLGHEREGNKP---EQIGALADQHIVHVACGESHNLAL 99

Query: 179 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVH 238
              GQ+F+ G  S    G   T   +  PR+++ L      QV+ G   +  L   G   
Sbjct: 100 SDRGQLFSWGAGSDGQLGLMTTEDAVAVPRVIQKLNQQTILQVSCGNWHSLALAADGQFF 159

Query: 239 TCGSNTHGQLGHGDTL-DRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 297
           T G N+HGQLG G     + +P+ +  LE +  + Q+AAG ++  A++ +G V+ +G  +
Sbjct: 160 TWGKNSHGQLGLGKEFPSQASPQRVRSLEGI-PLAQVAAGGAHSFALSLSGAVFGWGMNN 218

Query: 298 NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 357
              LG  ++ D   P  ++  R +   VV +S G+EH   L  SG V+T+G G CG LGH
Sbjct: 219 AGQLGLSDEEDRESPCHVKLLRTQ--KVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGH 276

Query: 358 GDEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSD 416
               D+  P  +  L      Q+ C R+     +  +G +Y FG    G LG    G + 
Sbjct: 277 DSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLG---TGHTC 333

Query: 417 KVLRPRILDSLRAHHVSQIS 436
            V  P  +    A H  Q+S
Sbjct: 334 NVKCPSPVKGYWAAHSGQLS 353



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 91/295 (30%), Positives = 136/295 (46%), Gaps = 22/295 (7%)

Query: 114 MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSAS 171
           + +  G  H L +S+   +FS G+   G LG    T   V+  R I   +   ++QVS  
Sbjct: 87  VHVACGESHNLALSDRGQLFSWGAGSDGQLGLM-TTEDAVAVPRVIQKLNQQTILQVSCG 145

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
             H+  +   GQ FT G NS    G          P+ V +L+G+P  QV AG   +  L
Sbjct: 146 NWHSLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFAL 205

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
           ++ G V   G N  GQLG  D  DR +P  +  L     VV I+ G  +   +T +G V+
Sbjct: 206 SLSGAVFGWGMNNAGQLGLSDEEDRESPCHVKLLR-TQKVVYISCGEEHTAVLTKSGGVF 264

Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA-LDSSGYVYTWGKG 350
           +FG+GS   LGH   +DE+ PR +      G  V +++ G +H +A + SSG +Y +G G
Sbjct: 265 TFGAGSCGQLGHDSMNDEVNPRRV--LELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCG 322

Query: 351 YCGALGHGDEIDKTLPEPLS---------------SLKSHLAVQVCARKRKTFVL 390
             G LG G   +   P P+                  K H+  Q+ +   +TFVL
Sbjct: 323 ARGQLGTGHTCNVKCPSPVKGYWAAHSGQLSARADRFKYHIVKQIFSGGDQTFVL 377


>gi|296196017|ref|XP_002745644.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 isoform 2
           [Callithrix jacchus]
          Length = 1050

 Score =  133 bits (334), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 96/301 (31%), Positives = 147/301 (48%), Gaps = 29/301 (9%)

Query: 193 FCCGHRDTNRP---------IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 243
            C G+    +P         +  P++   +     K+V  G N + FL   G V+TCG N
Sbjct: 2   LCWGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLN 61

Query: 244 THGQLGHGDTLDRPTPKSIAPLEEVGS-----VVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
           T GQLGH    ++P        E++G+     ++ +A G S+ LA++  G ++S+G+GS+
Sbjct: 62  TKGQLGHEREGNKP--------EQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSD 113

Query: 299 FCLGHGEQHDELQ-PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 357
             LG     D +  PR IQ   ++ I  ++VS G+ H +AL + G  +TWGK   G LG 
Sbjct: 114 GQLGLMTTEDSVAVPRLIQKLNQQTI--LQVSCGNWHCLALAADGQFFTWGKNSHGQLGL 171

Query: 358 GDEI-DKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSD 416
           G E   +  P+ + SL+     QV A    +F L  +G+V+G+G    G LG  D    +
Sbjct: 172 GKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRE 231

Query: 417 KVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 476
               P  +  LR   V  IS G  HT V+T  G +F FG     QLGHD++   + P  +
Sbjct: 232 S---PCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRV 288

Query: 477 F 477
            
Sbjct: 289 L 289



 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 98/309 (31%), Positives = 159/309 (51%), Gaps = 14/309 (4%)

Query: 159 FPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVP 217
           F S   V +V+   NH+ F+L+ G+V+TCG N+    GH R+ N+P      + AL    
Sbjct: 30  FISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGNKP----EQIGALADQH 85

Query: 218 CKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDR-PTPKSIAPLEEVGSVVQIAA 276
              V  G + +  L+ RG + + G+ + GQLG   T D    P+ I  L +  +++Q++ 
Sbjct: 86  IIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQ-QTILQVSC 144

Query: 277 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH-DELQPRAIQTFRRKGIHVVRVSAGDEHV 335
           G  + LA+  +G  +++G  S+  LG G++   +  P+ +++   +GI + +V+AG  H 
Sbjct: 145 GNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSL--EGIPLAQVAAGGAHS 202

Query: 336 VALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGS 395
            AL  SG V+ WG    G LG  DE D+  P  +  L++   V +   +  T VL  +G 
Sbjct: 203 FALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGG 262

Query: 396 VYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV-VTDRGRLFGF 454
           V+ FG    G LG     ++D+V  PR +  L    V+QI+ G  HT+  V   G ++ F
Sbjct: 263 VFTFGAGSCGQLG--HDSMNDEV-NPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAF 319

Query: 455 GDNERAQLG 463
           G   R QLG
Sbjct: 320 GCGARGQLG 328



 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 87/292 (29%), Positives = 140/292 (47%), Gaps = 8/292 (2%)

Query: 119 GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
           G +   L+ +  V++CG +  G LGH  E  +     +I   +  H++ V+  E+H+  +
Sbjct: 43  GNHSVFLLEDGEVYTCGLNTKGQLGHEREGNKP---EQIGALADQHIIHVACGESHSLAL 99

Query: 179 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVH 238
              GQ+F+ G  S    G   T   +  PRL++ L      QV+ G      L   G   
Sbjct: 100 SDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFF 159

Query: 239 TCGSNTHGQLGHGDTL-DRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 297
           T G N+HGQLG G     + +P+ +  LE +  + Q+AAG ++  A++ +G V+ +G  +
Sbjct: 160 TWGKNSHGQLGLGKEFPSQASPQRVRSLEGI-PLAQVAAGGAHSFALSLSGAVFGWGMNN 218

Query: 298 NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 357
              LG  ++ D   P  ++  R +   VV +S G+EH   L  SG V+T+G G CG LGH
Sbjct: 219 AGQLGLSDEKDRESPCHVKLLRTQ--KVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGH 276

Query: 358 GDEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLG 408
               D+  P  +  L      Q+ C R+     +  +G +Y FG    G LG
Sbjct: 277 DSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLG 328



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 91/295 (30%), Positives = 136/295 (46%), Gaps = 22/295 (7%)

Query: 114 MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSAS 171
           + +  G  H+L +S+   +FS G+   G LG    T   V+  R I   +   ++QVS  
Sbjct: 87  IHVACGESHSLALSDRGQLFSWGAGSDGQLGLM-TTEDSVAVPRLIQKLNQQTILQVSCG 145

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
             H   +   GQ FT G NS    G          P+ V +L+G+P  QV AG   +  L
Sbjct: 146 NWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFAL 205

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
           ++ G V   G N  GQLG  D  DR +P  +  L     VV I+ G  +   +T +G V+
Sbjct: 206 SLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLR-TQKVVYISCGEEHTAVLTKSGGVF 264

Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA-LDSSGYVYTWGKG 350
           +FG+GS   LGH   +DE+ PR +      G  V +++ G +H +A + SSG +Y +G G
Sbjct: 265 TFGAGSCGQLGHDSMNDEVNPRRV--LELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCG 322

Query: 351 YCGALGHGDEIDKTLPEPLS---------------SLKSHLAVQVCARKRKTFVL 390
             G LG G   +   P P+                  K H+  Q+ +   +TFVL
Sbjct: 323 ARGQLGTGHTCNVKCPSPVKGYWAAHSGQLTARADRFKYHIVKQIFSGGDQTFVL 377


>gi|402869928|ref|XP_003898995.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 isoform 1
           [Papio anubis]
          Length = 1050

 Score =  133 bits (334), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 96/301 (31%), Positives = 147/301 (48%), Gaps = 29/301 (9%)

Query: 193 FCCGHRDTNRP---------IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 243
            C G+    +P         +  P++   +     K+V  G N + FL   G V+TCG N
Sbjct: 2   LCWGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLN 61

Query: 244 THGQLGHGDTLDRPTPKSIAPLEEVGS-----VVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
           T GQLGH    ++P        E++G+     ++ +A G S+ LA++  G ++S+G+GS+
Sbjct: 62  TKGQLGHEREGNKP--------EQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSD 113

Query: 299 FCLGHGEQHDELQ-PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 357
             LG     D +  PR IQ   ++ I  ++VS G+ H +AL + G  +TWGK   G LG 
Sbjct: 114 GQLGLMTTEDSVAVPRLIQKLNQQTI--LQVSCGNWHCLALAADGQFFTWGKNSHGQLGL 171

Query: 358 GDEI-DKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSD 416
           G E   +  P+ + SL+     QV A    +F L  +G+V+G+G    G LG  D    +
Sbjct: 172 GKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRE 231

Query: 417 KVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 476
               P  +  LR   V  IS G  HT V+T  G +F FG     QLGHD++   + P  +
Sbjct: 232 S---PCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRV 288

Query: 477 F 477
            
Sbjct: 289 L 289



 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 98/309 (31%), Positives = 159/309 (51%), Gaps = 14/309 (4%)

Query: 159 FPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVP 217
           F S   V +V+   NH+ F+L+ G+V+TCG N+    GH R+ N+P      + AL    
Sbjct: 30  FISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGNKP----EQIGALADQH 85

Query: 218 CKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDR-PTPKSIAPLEEVGSVVQIAA 276
              V  G + +  L+ RG + + G+ + GQLG   T D    P+ I  L +  +++Q++ 
Sbjct: 86  IIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQ-QTILQVSC 144

Query: 277 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH-DELQPRAIQTFRRKGIHVVRVSAGDEHV 335
           G  + LA+  +G  +++G  S+  LG G++   +  P+ +++   +GI + +V+AG  H 
Sbjct: 145 GNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSL--EGIPLAQVAAGGAHS 202

Query: 336 VALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGS 395
            AL  SG V+ WG    G LG  DE D+  P  +  L++   V +   +  T VL  +G 
Sbjct: 203 FALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGG 262

Query: 396 VYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV-VTDRGRLFGF 454
           V+ FG    G LG     ++D+V  PR +  L    V+QI+ G  HT+  V   G ++ F
Sbjct: 263 VFTFGAGSCGQLG--HDSMNDEV-NPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAF 319

Query: 455 GDNERAQLG 463
           G   R QLG
Sbjct: 320 GCGARGQLG 328



 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 94/320 (29%), Positives = 150/320 (46%), Gaps = 11/320 (3%)

Query: 119 GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
           G +   L+ +  V++CG +  G LGH  E  +     +I   +  H++ V+  E+H+  +
Sbjct: 43  GNHSVFLLEDGEVYTCGLNTKGQLGHEREGNKP---EQIGALADQHIIHVACGESHSLAL 99

Query: 179 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVH 238
              GQ+F+ G  S    G   T   +  PRL++ L      QV+ G      L   G   
Sbjct: 100 SDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFF 159

Query: 239 TCGSNTHGQLGHGDTL-DRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 297
           T G N+HGQLG G     + +P+ +  LE +  + Q+AAG ++  A++ +G V+ +G  +
Sbjct: 160 TWGKNSHGQLGLGKEFPSQASPQRVRSLEGI-PLAQVAAGGAHSFALSLSGAVFGWGMNN 218

Query: 298 NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 357
              LG  ++ D   P  ++  R +   VV +S G+EH   L  SG V+T+G G CG LGH
Sbjct: 219 AGQLGLSDEKDRESPCHVKLLRTQ--KVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGH 276

Query: 358 GDEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSD 416
               D+  P  +  L      Q+ C R+     +  +G +Y FG    G LG    G + 
Sbjct: 277 DSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLG---TGHTC 333

Query: 417 KVLRPRILDSLRAHHVSQIS 436
            V  P  +    A H  Q+S
Sbjct: 334 NVKCPSPVKGYWAAHSGQLS 353



 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 91/295 (30%), Positives = 136/295 (46%), Gaps = 22/295 (7%)

Query: 114 MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSAS 171
           + +  G  H+L +S+   +FS G+   G LG    T   V+  R I   +   ++QVS  
Sbjct: 87  IHVACGESHSLALSDRGQLFSWGAGSDGQLGLM-TTEDSVAVPRLIQKLNQQTILQVSCG 145

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
             H   +   GQ FT G NS    G          P+ V +L+G+P  QV AG   +  L
Sbjct: 146 NWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFAL 205

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
           ++ G V   G N  GQLG  D  DR +P  +  L     VV I+ G  +   +T +G V+
Sbjct: 206 SLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLR-TQKVVYISCGEEHTAVLTKSGGVF 264

Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA-LDSSGYVYTWGKG 350
           +FG+GS   LGH   +DE+ PR +      G  V +++ G +H +A + SSG +Y +G G
Sbjct: 265 TFGAGSCGQLGHDSMNDEVNPRRV--LELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCG 322

Query: 351 YCGALGHGDEIDKTLPEPLS---------------SLKSHLAVQVCARKRKTFVL 390
             G LG G   +   P P+                  K H+  Q+ +   +TFVL
Sbjct: 323 ARGQLGTGHTCNVKCPSPVKGYWAAHSGQLSARADRFKYHIVKQIFSGGDQTFVL 377


>gi|332233510|ref|XP_003265945.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 isoform 1
           [Nomascus leucogenys]
          Length = 1050

 Score =  133 bits (334), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 96/301 (31%), Positives = 147/301 (48%), Gaps = 29/301 (9%)

Query: 193 FCCGHRDTNRP---------IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 243
            C G+    +P         +  P++   +     K+V  G N + FL   G V+TCG N
Sbjct: 2   LCWGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLN 61

Query: 244 THGQLGHGDTLDRPTPKSIAPLEEVGS-----VVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
           T GQLGH    ++P        E++G+     ++ +A G S+ LA++  G ++S+G+GS+
Sbjct: 62  TKGQLGHEREGNKP--------EQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSD 113

Query: 299 FCLGHGEQHDELQ-PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 357
             LG     D +  PR IQ   ++ I  ++VS G+ H +AL + G  +TWGK   G LG 
Sbjct: 114 GQLGLMTTEDSVAVPRLIQKLNQQTI--LQVSCGNWHCLALAADGQFFTWGKNSHGQLGL 171

Query: 358 GDEI-DKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSD 416
           G E   +  P+ + SL+     QV A    +F L  +G+V+G+G    G LG  D    +
Sbjct: 172 GKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRE 231

Query: 417 KVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 476
               P  +  LR   V  IS G  HT V+T  G +F FG     QLGHD++   + P  +
Sbjct: 232 S---PCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRV 288

Query: 477 F 477
            
Sbjct: 289 L 289



 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 98/309 (31%), Positives = 159/309 (51%), Gaps = 14/309 (4%)

Query: 159 FPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVP 217
           F S   V +V+   NH+ F+L+ G+V+TCG N+    GH R+ N+P      + AL    
Sbjct: 30  FISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGNKP----EQIGALADQH 85

Query: 218 CKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDR-PTPKSIAPLEEVGSVVQIAA 276
              V  G + +  L+ RG + + G+ + GQLG   T D    P+ I  L +  +++Q++ 
Sbjct: 86  IIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQ-QTILQVSC 144

Query: 277 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH-DELQPRAIQTFRRKGIHVVRVSAGDEHV 335
           G  + LA+  +G  +++G  S+  LG G++   +  P+ +++   +GI + +V+AG  H 
Sbjct: 145 GNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSL--EGIPLAQVAAGGAHS 202

Query: 336 VALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGS 395
            AL  SG V+ WG    G LG  DE D+  P  +  L++   V +   +  T VL  +G 
Sbjct: 203 FALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGG 262

Query: 396 VYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV-VTDRGRLFGF 454
           V+ FG    G LG     ++D+V  PR +  L    V+QI+ G  HT+  V   G ++ F
Sbjct: 263 VFTFGAGSCGQLG--HDSMNDEV-NPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAF 319

Query: 455 GDNERAQLG 463
           G   R QLG
Sbjct: 320 GCGARGQLG 328



 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 94/320 (29%), Positives = 150/320 (46%), Gaps = 11/320 (3%)

Query: 119 GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
           G +   L+ +  V++CG +  G LGH  E  +     +I   +  H++ V+  E+H+  +
Sbjct: 43  GNHSVFLLEDGEVYTCGLNTKGQLGHEREGNKP---EQIGALADQHIIHVACGESHSLAL 99

Query: 179 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVH 238
              GQ+F+ G  S    G   T   +  PRL++ L      QV+ G      L   G   
Sbjct: 100 SDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFF 159

Query: 239 TCGSNTHGQLGHGDTL-DRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 297
           T G N+HGQLG G     + +P+ +  LE +  + Q+AAG ++  A++ +G V+ +G  +
Sbjct: 160 TWGKNSHGQLGLGKEFPSQASPQRVRSLEGI-PLAQVAAGGAHSFALSLSGAVFGWGMNN 218

Query: 298 NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 357
              LG  ++ D   P  ++  R +   VV +S G+EH   L  SG V+T+G G CG LGH
Sbjct: 219 AGQLGLSDEKDRESPCHVKLLRTQ--KVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGH 276

Query: 358 GDEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSD 416
               D+  P  +  L      Q+ C R+     +  +G +Y FG    G LG    G + 
Sbjct: 277 DSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLG---TGHTC 333

Query: 417 KVLRPRILDSLRAHHVSQIS 436
            V  P  +    A H  Q+S
Sbjct: 334 NVKCPSPVKGYWAAHSGQLS 353



 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 91/295 (30%), Positives = 136/295 (46%), Gaps = 22/295 (7%)

Query: 114 MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSAS 171
           + +  G  H+L +S+   +FS G+   G LG    T   V+  R I   +   ++QVS  
Sbjct: 87  IHVACGESHSLALSDRGQLFSWGAGSDGQLGLM-TTEDSVAVPRLIQKLNQQTILQVSCG 145

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
             H   +   GQ FT G NS    G          P+ V +L+G+P  QV AG   +  L
Sbjct: 146 NWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFAL 205

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
           ++ G V   G N  GQLG  D  DR +P  +  L     VV I+ G  +   +T +G V+
Sbjct: 206 SLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLR-TQKVVYISCGEEHTAVLTKSGGVF 264

Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA-LDSSGYVYTWGKG 350
           +FG+GS   LGH   +DE+ PR +      G  V +++ G +H +A + SSG +Y +G G
Sbjct: 265 TFGAGSCGQLGHDSMNDEVNPRRV--LELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCG 322

Query: 351 YCGALGHGDEIDKTLPEPLS---------------SLKSHLAVQVCARKRKTFVL 390
             G LG G   +   P P+                  K H+  Q+ +   +TFVL
Sbjct: 323 ARGQLGTGHTCNVKCPSPVKGYWAAHSGQLSARADRFKYHIVKQIFSGGDQTFVL 377


>gi|410957262|ref|XP_003985250.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 [Felis catus]
          Length = 1031

 Score =  133 bits (334), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 90/252 (35%), Positives = 130/252 (51%), Gaps = 5/252 (1%)

Query: 215 GVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQI 274
           G   +Q  +G   +  L   G VH+CG N+ GQLG         PK I  LE +  V  +
Sbjct: 33  GPELRQAASGERHSLLLLSDGAVHSCGDNSRGQLGRRGLQREEQPKPIQALETL-RVELV 91

Query: 275 AAGPSYMLAVTGNGVVYSFGSGSNFCLGHGE-QHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           + G  + LAV   G V+++G+GS   LG GE +   L P+ I+T    GI +++VS G+ 
Sbjct: 92  SCGKEHSLAVCYKGRVFAWGAGSEGQLGIGEFKEINLIPQKIKTL--TGIKIIQVSCGNY 149

Query: 334 HVVALDSSGYVYTWGKGYCGALGHGDEI-DKTLPEPLSSLKSHLAVQVCARKRKTFVLVD 392
           H +AL   G V++WG    G LG G E+  +  P+ + SL      QV A    +F L  
Sbjct: 150 HSLALSEDGQVFSWGSNSHGQLGLGKELPSQASPQRVRSLDGIPLAQVAAGGAHSFALSL 209

Query: 393 TGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLF 452
           +G+ +G+G    G L F    V  +  +PR + +L+   V  IS G  HT V+T  G++F
Sbjct: 210 SGTSFGWGSNNAGQLAFFGSNVPVQSYKPRSVSALKTLGVVYISCGHEHTAVLTQNGKVF 269

Query: 453 GFGDNERAQLGH 464
            FGDN   QLGH
Sbjct: 270 TFGDNSCGQLGH 281



 Score =  108 bits (270), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 88/302 (29%), Positives = 149/302 (49%), Gaps = 14/302 (4%)

Query: 160 PSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCK 219
           P    + Q ++ E H+  +L  G V +CGDNS    G R   R   +P+ ++AL+ +  +
Sbjct: 31  PGGPELRQAASGERHSLLLLSDGAVHSCGDNSRGQLGRRGLQREE-QPKPIQALETLRVE 89

Query: 220 QVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLD-RPTPKSIAPLEEVGSVVQIAAGP 278
            V+ G   +  +  +G V   G+ + GQLG G+  +    P+ I  L  +  ++Q++ G 
Sbjct: 90  LVSCGKEHSLAVCYKGRVFAWGAGSEGQLGIGEFKEINLIPQKIKTLTGI-KIIQVSCGN 148

Query: 279 SYMLAVTGNGVVYSFGSGSNFCLGHGEQ-HDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
            + LA++ +G V+S+GS S+  LG G++   +  P+ +++    GI + +V+AG  H  A
Sbjct: 149 YHSLALSEDGQVFSWGSNSHGQLGLGKELPSQASPQRVRSL--DGIPLAQVAAGGAHSFA 206

Query: 338 LDSSGYVYTWGKGYCGAL---GHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 394
           L  SG  + WG    G L   G    +    P  +S+LK+   V +      T VL   G
Sbjct: 207 LSLSGTSFGWGSNNAGQLAFFGSNVPVQSYKPRSVSALKTLGVVYISCGHEHTAVLTQNG 266

Query: 395 SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV-VTDRGRLFG 453
            V+ FG    G LG      + +   P++++ +    VSQI  G YHT+  V   G++  
Sbjct: 267 KVFTFGDNSCGQLG---HSPTAEKTGPQLMEGIEG-LVSQIDCGSYHTLAYVYTTGQVVS 322

Query: 454 FG 455
           FG
Sbjct: 323 FG 324



 Score =  104 bits (260), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 88/300 (29%), Positives = 139/300 (46%), Gaps = 27/300 (9%)

Query: 115 QITTGRYHTLLI-SNSSVFSCGSSLCGVLG-------HGPETTQCVSFTRINFPSAAHVV 166
           Q  +G  H+LL+ S+ +V SCG +  G LG         P+  Q +   R+         
Sbjct: 38  QAASGERHSLLLLSDGAVHSCGDNSRGQLGRRGLQREEQPKPIQALETLRVEL------- 90

Query: 167 QVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN 226
            VS  + H+  V   G+VF  G  S    G  +       P+ ++ L G+   QV+ G  
Sbjct: 91  -VSCGKEHSLAVCYKGRVFAWGAGSEGQLGIGEFKEINLIPQKIKTLTGIKIIQVSCGNY 149

Query: 227 FTGFLTIRGHVHTCGSNTHGQLGHGDTL-DRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 285
            +  L+  G V + GSN+HGQLG G  L  + +P+ +  L+ +  + Q+AAG ++  A++
Sbjct: 150 HSLALSEDGQVFSWGSNSHGQLGLGKELPSQASPQRVRSLDGI-PLAQVAAGGAHSFALS 208

Query: 286 GNGVVYSFGSGSNFC-----LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 340
            +G   SFG GSN        G        +PR++   +  G  VV +S G EH   L  
Sbjct: 209 LSGT--SFGWGSNNAGQLAFFGSNVPVQSYKPRSVSALKTLG--VVYISCGHEHTAVLTQ 264

Query: 341 SGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 400
           +G V+T+G   CG LGH    +KT P+ +  ++  ++   C        +  TG V  FG
Sbjct: 265 NGKVFTFGDNSCGQLGHSPTAEKTGPQLMEGIEGLVSQIDCGSYHTLAYVYTTGQVVSFG 324


>gi|417405695|gb|JAA49551.1| Putative e3 ubiquitin-protein ligase herc3 [Desmodus rotundus]
          Length = 1050

 Score =  133 bits (334), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 97/301 (32%), Positives = 147/301 (48%), Gaps = 29/301 (9%)

Query: 193 FCCGHRDTNRP---------IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 243
            C G+    +P         +  P++   +     K+V  G N + FL   G V+TCG N
Sbjct: 2   LCWGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLN 61

Query: 244 THGQLGHGDTLDRPTPKSIAPLEEVGS-----VVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
           T GQLGH    ++P        E++G+     +V +A G S+ LA++  G ++S+G+GS+
Sbjct: 62  TKGQLGHEREGNKP--------EQIGALADQHIVHVACGESHSLALSDRGQLFSWGAGSD 113

Query: 299 FCLGHGEQHDELQ-PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 357
             LG     D +  PR IQ   ++ I  ++VS G+ H +AL + G  +TWGK   G LG 
Sbjct: 114 GQLGLMTTEDSVAVPRLIQKLNQQTI--LQVSCGNWHCLALAADGQFFTWGKNSHGQLGL 171

Query: 358 GDEI-DKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSD 416
           G E   +  P+ + SL+     QV A    +F L  +G+V+G+G    G LG  D    +
Sbjct: 172 GKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEEDRE 231

Query: 417 KVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 476
               P  +  LR   V  IS G  HT V+T  G +F FG     QLGHD++   + P  +
Sbjct: 232 S---PCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRV 288

Query: 477 F 477
            
Sbjct: 289 L 289



 Score =  126 bits (316), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 98/309 (31%), Positives = 159/309 (51%), Gaps = 14/309 (4%)

Query: 159 FPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVP 217
           F S   V +V+   NH+ F+L+ G+V+TCG N+    GH R+ N+P      + AL    
Sbjct: 30  FISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGNKP----EQIGALADQH 85

Query: 218 CKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDR-PTPKSIAPLEEVGSVVQIAA 276
              V  G + +  L+ RG + + G+ + GQLG   T D    P+ I  L +  +++Q++ 
Sbjct: 86  IVHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQ-QTILQVSC 144

Query: 277 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH-DELQPRAIQTFRRKGIHVVRVSAGDEHV 335
           G  + LA+  +G  +++G  S+  LG G++   +  P+ +++   +GI + +V+AG  H 
Sbjct: 145 GNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSL--EGIPLAQVAAGGAHS 202

Query: 336 VALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGS 395
            AL  SG V+ WG    G LG  DE D+  P  +  L++   V +   +  T VL  +G 
Sbjct: 203 FALSLSGAVFGWGMNNAGQLGLSDEEDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGG 262

Query: 396 VYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV-VTDRGRLFGF 454
           V+ FG    G LG     ++D+V  PR +  L    V+QI+ G  HT+  V   G ++ F
Sbjct: 263 VFTFGAGSCGQLG--HDSMNDEV-NPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAF 319

Query: 455 GDNERAQLG 463
           G   R QLG
Sbjct: 320 GCGARGQLG 328



 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 95/320 (29%), Positives = 150/320 (46%), Gaps = 11/320 (3%)

Query: 119 GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
           G +   L+ +  V++CG +  G LGH  E  +     +I   +  H+V V+  E+H+  +
Sbjct: 43  GNHSVFLLEDGEVYTCGLNTKGQLGHEREGNKP---EQIGALADQHIVHVACGESHSLAL 99

Query: 179 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVH 238
              GQ+F+ G  S    G   T   +  PRL++ L      QV+ G      L   G   
Sbjct: 100 SDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFF 159

Query: 239 TCGSNTHGQLGHGDTL-DRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 297
           T G N+HGQLG G     + +P+ +  LE +  + Q+AAG ++  A++ +G V+ +G  +
Sbjct: 160 TWGKNSHGQLGLGKEFPSQASPQRVRSLEGI-PLAQVAAGGAHSFALSLSGAVFGWGMNN 218

Query: 298 NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 357
              LG  ++ D   P  ++  R +   VV +S G+EH   L  SG V+T+G G CG LGH
Sbjct: 219 AGQLGLSDEEDRESPCHVKLLRTQ--KVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGH 276

Query: 358 GDEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSD 416
               D+  P  +  L      Q+ C R+     +  +G +Y FG    G LG    G + 
Sbjct: 277 DSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLG---TGHTC 333

Query: 417 KVLRPRILDSLRAHHVSQIS 436
            V  P  +    A H  Q+S
Sbjct: 334 NVKCPSPVKGYWAAHSGQLS 353



 Score =  105 bits (263), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 91/295 (30%), Positives = 136/295 (46%), Gaps = 22/295 (7%)

Query: 114 MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSAS 171
           + +  G  H+L +S+   +FS G+   G LG    T   V+  R I   +   ++QVS  
Sbjct: 87  VHVACGESHSLALSDRGQLFSWGAGSDGQLGLM-TTEDSVAVPRLIQKLNQQTILQVSCG 145

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
             H   +   GQ FT G NS    G          P+ V +L+G+P  QV AG   +  L
Sbjct: 146 NWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFAL 205

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
           ++ G V   G N  GQLG  D  DR +P  +  L     VV I+ G  +   +T +G V+
Sbjct: 206 SLSGAVFGWGMNNAGQLGLSDEEDRESPCHVKLLR-TQKVVYISCGEEHTAVLTKSGGVF 264

Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA-LDSSGYVYTWGKG 350
           +FG+GS   LGH   +DE+ PR +      G  V +++ G +H +A + SSG +Y +G G
Sbjct: 265 TFGAGSCGQLGHDSMNDEVNPRRV--LELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCG 322

Query: 351 YCGALGHGDEIDKTLPEPLS---------------SLKSHLAVQVCARKRKTFVL 390
             G LG G   +   P P+                  K H+  Q+ +   +TFVL
Sbjct: 323 ARGQLGTGHTCNVKCPSPVKGYWAAHSGQLSARSDRFKYHIVKQIFSGGDQTFVL 377


>gi|229576490|gb|ACQ82635.1| At3g15430-like protein [Solanum hirtum]
          Length = 90

 Score =  133 bits (334), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 63/90 (70%), Positives = 74/90 (82%)

Query: 24  SGRLSAVDLAHLELTSKTFGGSHGLYPQKFRSLVDLAASQLCALHSIYAGMSRNVQIELL 83
           SGRL+ +DL  LELTS+TF G+HGL+P+KF+SLVD AA QLCAL  IYA +  N Q ELL
Sbjct: 1   SGRLAGIDLISLELTSRTFRGTHGLFPKKFKSLVDYAAFQLCALSPIYASLHCNAQEELL 60

Query: 84  NRCNGNWKRVLRFLQSVEHSSDIVETSAGN 113
            RCN NWKR+LRFLQ+VE SSD+VETSAGN
Sbjct: 61  KRCNDNWKRLLRFLQAVEQSSDMVETSAGN 90


>gi|7657152|ref|NP_055421.1| probable E3 ubiquitin-protein ligase HERC3 isoform 1 [Homo sapiens]
 gi|397480079|ref|XP_003811323.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 isoform 1
           [Pan paniscus]
 gi|426344933|ref|XP_004039158.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 isoform 1
           [Gorilla gorilla gorilla]
 gi|2495699|sp|Q15034.1|HERC3_HUMAN RecName: Full=Probable E3 ubiquitin-protein ligase HERC3; AltName:
           Full=HECT domain and RCC1-like domain-containing protein
           3
 gi|119626429|gb|EAX06024.1| hect domain and RLD 3 [Homo sapiens]
 gi|158261003|dbj|BAF82679.1| unnamed protein product [Homo sapiens]
 gi|168274306|dbj|BAG09573.1| E3 ubiquitin-protein ligase HERC3 [synthetic construct]
 gi|187252515|gb|AAI66672.1| Hect domain and RLD 3 [synthetic construct]
 gi|410211922|gb|JAA03180.1| hect domain and RLD 3 [Pan troglodytes]
 gi|410261200|gb|JAA18566.1| hect domain and RLD 3 [Pan troglodytes]
 gi|410295580|gb|JAA26390.1| hect domain and RLD 3 [Pan troglodytes]
 gi|410339519|gb|JAA38706.1| hect domain and RLD 3 [Pan troglodytes]
          Length = 1050

 Score =  133 bits (334), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 96/301 (31%), Positives = 147/301 (48%), Gaps = 29/301 (9%)

Query: 193 FCCGHRDTNRP---------IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 243
            C G+    +P         +  P++   +     K+V  G N + FL   G V+TCG N
Sbjct: 2   LCWGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLN 61

Query: 244 THGQLGHGDTLDRPTPKSIAPLEEVGS-----VVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
           T GQLGH    ++P        E++G+     ++ +A G S+ LA++  G ++S+G+GS+
Sbjct: 62  TKGQLGHEREGNKP--------EQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSD 113

Query: 299 FCLGHGEQHDELQ-PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 357
             LG     D +  PR IQ   ++ I  ++VS G+ H +AL + G  +TWGK   G LG 
Sbjct: 114 GQLGLMTTEDSVAVPRLIQKLNQQTI--LQVSCGNWHCLALAADGQFFTWGKNSHGQLGL 171

Query: 358 GDEI-DKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSD 416
           G E   +  P+ + SL+     QV A    +F L  +G+V+G+G    G LG  D    +
Sbjct: 172 GKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRE 231

Query: 417 KVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 476
               P  +  LR   V  IS G  HT V+T  G +F FG     QLGHD++   + P  +
Sbjct: 232 S---PCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRV 288

Query: 477 F 477
            
Sbjct: 289 L 289



 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 98/309 (31%), Positives = 159/309 (51%), Gaps = 14/309 (4%)

Query: 159 FPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVP 217
           F S   V +V+   NH+ F+L+ G+V+TCG N+    GH R+ N+P      + AL    
Sbjct: 30  FISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGNKP----EQIGALADQH 85

Query: 218 CKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDR-PTPKSIAPLEEVGSVVQIAA 276
              V  G + +  L+ RG + + G+ + GQLG   T D    P+ I  L +  +++Q++ 
Sbjct: 86  IIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQ-QTILQVSC 144

Query: 277 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH-DELQPRAIQTFRRKGIHVVRVSAGDEHV 335
           G  + LA+  +G  +++G  S+  LG G++   +  P+ +++   +GI + +V+AG  H 
Sbjct: 145 GNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSL--EGIPLAQVAAGGAHS 202

Query: 336 VALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGS 395
            AL  SG V+ WG    G LG  DE D+  P  +  L++   V +   +  T VL  +G 
Sbjct: 203 FALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGG 262

Query: 396 VYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV-VTDRGRLFGF 454
           V+ FG    G LG     ++D+V  PR +  L    V+QI+ G  HT+  V   G ++ F
Sbjct: 263 VFTFGAGSCGQLG--HDSMNDEV-NPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAF 319

Query: 455 GDNERAQLG 463
           G   R QLG
Sbjct: 320 GCGARGQLG 328



 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 94/320 (29%), Positives = 150/320 (46%), Gaps = 11/320 (3%)

Query: 119 GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
           G +   L+ +  V++CG +  G LGH  E  +     +I   +  H++ V+  E+H+  +
Sbjct: 43  GNHSVFLLEDGEVYTCGLNTKGQLGHEREGNKP---EQIGALADQHIIHVACGESHSLAL 99

Query: 179 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVH 238
              GQ+F+ G  S    G   T   +  PRL++ L      QV+ G      L   G   
Sbjct: 100 SDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFF 159

Query: 239 TCGSNTHGQLGHGDTL-DRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 297
           T G N+HGQLG G     + +P+ +  LE +  + Q+AAG ++  A++ +G V+ +G  +
Sbjct: 160 TWGKNSHGQLGLGKEFPSQASPQRVRSLEGI-PLAQVAAGGAHSFALSLSGAVFGWGMNN 218

Query: 298 NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 357
              LG  ++ D   P  ++  R +   VV +S G+EH   L  SG V+T+G G CG LGH
Sbjct: 219 AGQLGLSDEKDRESPCHVKLLRTQ--KVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGH 276

Query: 358 GDEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSD 416
               D+  P  +  L      Q+ C R+     +  +G +Y FG    G LG    G + 
Sbjct: 277 DSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLG---TGHTC 333

Query: 417 KVLRPRILDSLRAHHVSQIS 436
            V  P  +    A H  Q+S
Sbjct: 334 NVKCPSPVKGYWAAHSGQLS 353



 Score =  106 bits (265), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 91/295 (30%), Positives = 136/295 (46%), Gaps = 22/295 (7%)

Query: 114 MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSAS 171
           + +  G  H+L +S+   +FS G+   G LG    T   V+  R I   +   ++QVS  
Sbjct: 87  IHVACGESHSLALSDRGQLFSWGAGSDGQLGLM-TTEDSVAVPRLIQKLNQQTILQVSCG 145

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
             H   +   GQ FT G NS    G          P+ V +L+G+P  QV AG   +  L
Sbjct: 146 NWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFAL 205

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
           ++ G V   G N  GQLG  D  DR +P  +  L     VV I+ G  +   +T +G V+
Sbjct: 206 SLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLR-TQKVVYISCGEEHTAVLTKSGGVF 264

Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA-LDSSGYVYTWGKG 350
           +FG+GS   LGH   +DE+ PR +      G  V +++ G +H +A + SSG +Y +G G
Sbjct: 265 TFGAGSCGQLGHDSMNDEVNPRRV--LELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCG 322

Query: 351 YCGALGHGDEIDKTLPEPLS---------------SLKSHLAVQVCARKRKTFVL 390
             G LG G   +   P P+                  K H+  Q+ +   +TFVL
Sbjct: 323 ARGQLGTGHTCNVKCPSPVKGYWAAHSGQLSARADRFKYHIVKQIFSGGDQTFVL 377


>gi|281344274|gb|EFB19858.1| hypothetical protein PANDA_001437 [Ailuropoda melanoleuca]
          Length = 1050

 Score =  133 bits (334), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 97/301 (32%), Positives = 147/301 (48%), Gaps = 29/301 (9%)

Query: 193 FCCGHRDTNRP---------IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 243
            C G+    +P         +  P++   +     K+V  G N + FL   G V+TCG N
Sbjct: 2   LCWGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLN 61

Query: 244 THGQLGHGDTLDRPTPKSIAPLEEVGS-----VVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
           T GQLGH    ++P        E++G+     +V +A G S+ LA++  G ++S+G+GS+
Sbjct: 62  TKGQLGHEREGNKP--------EQIGALADQHIVHVACGESHSLALSDRGQLFSWGAGSD 113

Query: 299 FCLGHGEQHDELQ-PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 357
             LG     D +  PR IQ   ++ I  ++VS G+ H +AL + G  +TWGK   G LG 
Sbjct: 114 GQLGLMTTEDSVAVPRLIQKLNQQTI--LQVSCGNWHCLALAADGQFFTWGKNSHGQLGL 171

Query: 358 GDEI-DKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSD 416
           G E   +  P+ + SL+     QV A    +F L  +G+V+G+G    G LG  D    +
Sbjct: 172 GKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEEDRE 231

Query: 417 KVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 476
               P  +  LR   V  IS G  HT V+T  G +F FG     QLGHD++   + P  +
Sbjct: 232 S---PCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRV 288

Query: 477 F 477
            
Sbjct: 289 L 289



 Score =  126 bits (316), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 98/309 (31%), Positives = 159/309 (51%), Gaps = 14/309 (4%)

Query: 159 FPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVP 217
           F S   V +V+   NH+ F+L+ G+V+TCG N+    GH R+ N+P      + AL    
Sbjct: 30  FISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGNKP----EQIGALADQH 85

Query: 218 CKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDR-PTPKSIAPLEEVGSVVQIAA 276
              V  G + +  L+ RG + + G+ + GQLG   T D    P+ I  L +  +++Q++ 
Sbjct: 86  IVHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQ-QTILQVSC 144

Query: 277 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH-DELQPRAIQTFRRKGIHVVRVSAGDEHV 335
           G  + LA+  +G  +++G  S+  LG G++   +  P+ +++   +GI + +V+AG  H 
Sbjct: 145 GNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSL--EGIPLAQVAAGGAHS 202

Query: 336 VALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGS 395
            AL  SG V+ WG    G LG  DE D+  P  +  L++   V +   +  T VL  +G 
Sbjct: 203 FALSLSGAVFGWGMNNAGQLGLSDEEDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGG 262

Query: 396 VYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV-VTDRGRLFGF 454
           V+ FG    G LG     ++D+V  PR +  L    V+QI+ G  HT+  V   G ++ F
Sbjct: 263 VFTFGAGSCGQLG--HDSMNDEV-NPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAF 319

Query: 455 GDNERAQLG 463
           G   R QLG
Sbjct: 320 GCGARGQLG 328



 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 95/320 (29%), Positives = 150/320 (46%), Gaps = 11/320 (3%)

Query: 119 GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
           G +   L+ +  V++CG +  G LGH  E  +     +I   +  H+V V+  E+H+  +
Sbjct: 43  GNHSVFLLEDGEVYTCGLNTKGQLGHEREGNKP---EQIGALADQHIVHVACGESHSLAL 99

Query: 179 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVH 238
              GQ+F+ G  S    G   T   +  PRL++ L      QV+ G      L   G   
Sbjct: 100 SDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFF 159

Query: 239 TCGSNTHGQLGHGDTL-DRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 297
           T G N+HGQLG G     + +P+ +  LE +  + Q+AAG ++  A++ +G V+ +G  +
Sbjct: 160 TWGKNSHGQLGLGKEFPSQASPQRVRSLEGI-PLAQVAAGGAHSFALSLSGAVFGWGMNN 218

Query: 298 NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 357
              LG  ++ D   P  ++  R +   VV +S G+EH   L  SG V+T+G G CG LGH
Sbjct: 219 AGQLGLSDEEDRESPCHVKLLRTQ--KVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGH 276

Query: 358 GDEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSD 416
               D+  P  +  L      Q+ C R+     +  +G +Y FG    G LG    G + 
Sbjct: 277 DSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLG---TGHTC 333

Query: 417 KVLRPRILDSLRAHHVSQIS 436
            V  P  +    A H  Q+S
Sbjct: 334 NVKCPSPVKGYWAAHSGQLS 353



 Score =  105 bits (263), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 91/295 (30%), Positives = 136/295 (46%), Gaps = 22/295 (7%)

Query: 114 MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSAS 171
           + +  G  H+L +S+   +FS G+   G LG    T   V+  R I   +   ++QVS  
Sbjct: 87  VHVACGESHSLALSDRGQLFSWGAGSDGQLGLM-TTEDSVAVPRLIQKLNQQTILQVSCG 145

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
             H   +   GQ FT G NS    G          P+ V +L+G+P  QV AG   +  L
Sbjct: 146 NWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFAL 205

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
           ++ G V   G N  GQLG  D  DR +P  +  L     VV I+ G  +   +T +G V+
Sbjct: 206 SLSGAVFGWGMNNAGQLGLSDEEDRESPCHVKLLR-TQKVVYISCGEEHTAVLTKSGGVF 264

Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA-LDSSGYVYTWGKG 350
           +FG+GS   LGH   +DE+ PR +      G  V +++ G +H +A + SSG +Y +G G
Sbjct: 265 TFGAGSCGQLGHDSMNDEVNPRRV--LELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCG 322

Query: 351 YCGALGHGDEIDKTLPEPLS---------------SLKSHLAVQVCARKRKTFVL 390
             G LG G   +   P P+                  K H+  Q+ +   +TFVL
Sbjct: 323 ARGQLGTGHTCNVKCPSPVKGYWAAHSGQLSARADRFKYHIVKQIFSGGDQTFVL 377


>gi|386780812|ref|NP_001248295.1| probable E3 ubiquitin-protein ligase HERC3 [Macaca mulatta]
 gi|355687450|gb|EHH26034.1| Putative E3 ubiquitin-protein ligase HERC3 [Macaca mulatta]
 gi|355749437|gb|EHH53836.1| Putative E3 ubiquitin-protein ligase HERC3 [Macaca fascicularis]
 gi|380817668|gb|AFE80708.1| putative E3 ubiquitin-protein ligase HERC3 [Macaca mulatta]
 gi|383408291|gb|AFH27359.1| putative E3 ubiquitin-protein ligase HERC3 [Macaca mulatta]
          Length = 1050

 Score =  133 bits (334), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 96/301 (31%), Positives = 147/301 (48%), Gaps = 29/301 (9%)

Query: 193 FCCGHRDTNRP---------IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 243
            C G+    +P         +  P++   +     K+V  G N + FL   G V+TCG N
Sbjct: 2   LCWGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLN 61

Query: 244 THGQLGHGDTLDRPTPKSIAPLEEVGS-----VVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
           T GQLGH    ++P        E++G+     ++ +A G S+ LA++  G ++S+G+GS+
Sbjct: 62  TKGQLGHEREGNKP--------EQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSD 113

Query: 299 FCLGHGEQHDELQ-PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 357
             LG     D +  PR IQ   ++ I  ++VS G+ H +AL + G  +TWGK   G LG 
Sbjct: 114 GQLGLMTTEDSVAVPRLIQKLNQQTI--LQVSCGNWHCLALAADGQFFTWGKNSHGQLGL 171

Query: 358 GDEI-DKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSD 416
           G E   +  P+ + SL+     QV A    +F L  +G+V+G+G    G LG  D    +
Sbjct: 172 GKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRE 231

Query: 417 KVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 476
               P  +  LR   V  IS G  HT V+T  G +F FG     QLGHD++   + P  +
Sbjct: 232 S---PCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRV 288

Query: 477 F 477
            
Sbjct: 289 L 289



 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 98/309 (31%), Positives = 159/309 (51%), Gaps = 14/309 (4%)

Query: 159 FPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVP 217
           F S   V +V+   NH+ F+L+ G+V+TCG N+    GH R+ N+P      + AL    
Sbjct: 30  FISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGNKP----EQIGALADQH 85

Query: 218 CKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDR-PTPKSIAPLEEVGSVVQIAA 276
              V  G + +  L+ RG + + G+ + GQLG   T D    P+ I  L +  +++Q++ 
Sbjct: 86  IIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQ-QTILQVSC 144

Query: 277 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH-DELQPRAIQTFRRKGIHVVRVSAGDEHV 335
           G  + LA+  +G  +++G  S+  LG G++   +  P+ +++   +GI + +V+AG  H 
Sbjct: 145 GNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSL--EGIPLAQVAAGGAHS 202

Query: 336 VALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGS 395
            AL  SG V+ WG    G LG  DE D+  P  +  L++   V +   +  T VL  +G 
Sbjct: 203 FALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGG 262

Query: 396 VYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV-VTDRGRLFGF 454
           V+ FG    G LG     ++D+V  PR +  L    V+QI+ G  HT+  V   G ++ F
Sbjct: 263 VFTFGAGSCGQLG--HDSMNDEV-NPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAF 319

Query: 455 GDNERAQLG 463
           G   R QLG
Sbjct: 320 GCGARGQLG 328



 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 94/320 (29%), Positives = 150/320 (46%), Gaps = 11/320 (3%)

Query: 119 GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
           G +   L+ +  V++CG +  G LGH  E  +     +I   +  H++ V+  E+H+  +
Sbjct: 43  GNHSVFLLEDGEVYTCGLNTKGQLGHEREGNKP---EQIGALADQHIIHVACGESHSLAL 99

Query: 179 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVH 238
              GQ+F+ G  S    G   T   +  PRL++ L      QV+ G      L   G   
Sbjct: 100 SDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFF 159

Query: 239 TCGSNTHGQLGHGDTL-DRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 297
           T G N+HGQLG G     + +P+ +  LE +  + Q+AAG ++  A++ +G V+ +G  +
Sbjct: 160 TWGKNSHGQLGLGKEFPSQASPQRVRSLEGI-PLAQVAAGGAHSFALSLSGAVFGWGMNN 218

Query: 298 NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 357
              LG  ++ D   P  ++  R +   VV +S G+EH   L  SG V+T+G G CG LGH
Sbjct: 219 AGQLGLSDEKDRESPCHVKLLRTQ--KVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGH 276

Query: 358 GDEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSD 416
               D+  P  +  L      Q+ C R+     +  +G +Y FG    G LG    G + 
Sbjct: 277 DSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLG---TGHTC 333

Query: 417 KVLRPRILDSLRAHHVSQIS 436
            V  P  +    A H  Q+S
Sbjct: 334 NVKCPSPVKGYWAAHSGQLS 353



 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 91/295 (30%), Positives = 136/295 (46%), Gaps = 22/295 (7%)

Query: 114 MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSAS 171
           + +  G  H+L +S+   +FS G+   G LG    T   V+  R I   +   ++QVS  
Sbjct: 87  IHVACGESHSLALSDRGQLFSWGAGSDGQLGLM-TTEDSVAVPRLIQKLNQQTILQVSCG 145

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
             H   +   GQ FT G NS    G          P+ V +L+G+P  QV AG   +  L
Sbjct: 146 NWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFAL 205

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
           ++ G V   G N  GQLG  D  DR +P  +  L     VV I+ G  +   +T +G V+
Sbjct: 206 SLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLR-TQKVVYISCGEEHTAVLTKSGGVF 264

Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA-LDSSGYVYTWGKG 350
           +FG+GS   LGH   +DE+ PR +      G  V +++ G +H +A + SSG +Y +G G
Sbjct: 265 TFGAGSCGQLGHDSMNDEVNPRRV--LELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCG 322

Query: 351 YCGALGHGDEIDKTLPEPLS---------------SLKSHLAVQVCARKRKTFVL 390
             G LG G   +   P P+                  K H+  Q+ +   +TFVL
Sbjct: 323 ARGQLGTGHTCNVKCPSPVKGYWAAHSGQLSARADRFKYHIVKQIFSGGDQTFVL 377


>gi|186524238|ref|NP_197443.3| regulator of chromosome condensation-like protein with FYVE zinc
           finger domain [Arabidopsis thaliana]
 gi|332005320|gb|AED92703.1| regulator of chromosome condensation-like protein with FYVE zinc
           finger domain [Arabidopsis thaliana]
          Length = 1105

 Score =  133 bits (334), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 97/313 (30%), Positives = 148/313 (47%), Gaps = 20/313 (6%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVPCKQVTA 223
           V  ++    HA  V + G+ F+ G+ S    GH  D+N  +  P+L++AL     + V  
Sbjct: 314 VQNIACGGQHAVLVTKQGESFSWGEESEGRLGHGVDSN--VQHPKLIDALNTTNIELVAC 371

Query: 224 GLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
           G   +  +T+ G ++T G    G LGHG+ +    PK +  L E   V  IA GP +   
Sbjct: 372 GEYHSCAVTLSGDLYTWGKGDFGILGHGNEVSHWVPKRVNFLMEGIHVSSIACGPYHTAV 431

Query: 284 VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL----- 338
           VT  G +++FG G+   LGHG++     PR + +   KG+  VR + G  H  A+     
Sbjct: 432 VTSAGQLFTFGDGTFGVLGHGDRKSVFIPREVDSL--KGLRTVRAACGVWHTAAVVEVMV 489

Query: 339 -------DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 391
                   SSG ++TWG G    LGHGD+  K +P  +++L      QV      T  L 
Sbjct: 490 GSSSSSNCSSGKLFTWGDGDKSRLGHGDKEPKLVPTCVAALVEPNFCQVACGHSLTVALT 549

Query: 392 DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRL 451
            +G VY  G   +G LG P    +D  +  R+   L    V +I+ G YH  V+T R  +
Sbjct: 550 TSGHVYTMGSPVYGQLGNPH---ADGKVPTRVDGKLHKSFVEEIACGAYHVAVLTSRTEV 606

Query: 452 FGFGDNERAQLGH 464
           + +G     +LGH
Sbjct: 607 YTWGKGSNGRLGH 619



 Score =  116 bits (290), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 92/290 (31%), Positives = 138/290 (47%), Gaps = 20/290 (6%)

Query: 99  SVEHSSDIVETSAGNMQ-ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR 156
           +V+H   I   +  N++ +  G YH+  ++ S  +++ G    G+LGHG E +  V   R
Sbjct: 351 NVQHPKLIDALNTTNIELVACGEYHSCAVTLSGDLYTWGKGDFGILGHGNEVSHWVP-KR 409

Query: 157 INF-PSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 215
           +NF     HV  ++    H A V  +GQ+FT GD +    GH D  + +F PR V++LKG
Sbjct: 410 VNFLMEGIHVSSIACGPYHTAVVTSAGQLFTFGDGTFGVLGHGD-RKSVFIPREVDSLKG 468

Query: 216 VPCKQVTAGLNFTGFLT------------IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 263
           +   +   G+  T  +               G + T G     +LGHGD   +  P  +A
Sbjct: 469 LRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDKSRLGHGDKEPKLVPTCVA 528

Query: 264 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGI 323
            L E  +  Q+A G S  +A+T +G VY+ GS     LG+     ++  R      +   
Sbjct: 529 ALVEP-NFCQVACGHSLTVALTTSGHVYTMGSPVYGQLGNPHADGKVPTRVDGKLHKS-- 585

Query: 324 HVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
            V  ++ G  HV  L S   VYTWGKG  G LGHGD  D+  P  + SLK
Sbjct: 586 FVEEIACGAYHVAVLTSRTEVYTWGKGSNGRLGHGDADDRNSPTLVESLK 635



 Score = 99.8 bits (247), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 71/218 (32%), Positives = 106/218 (48%), Gaps = 20/218 (9%)

Query: 271 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 330
           V  IA G  + + VT  G  +S+G  S   LGHG   +   P+ I       I +V  + 
Sbjct: 314 VQNIACGGQHAVLVTKQGESFSWGEESEGRLGHGVDSNVQHPKLIDALNTTNIELV--AC 371

Query: 331 GDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKS--HLAVQVCARKRKTF 388
           G+ H  A+  SG +YTWGKG  G LGHG+E+   +P+ ++ L    H++   C     T 
Sbjct: 372 GEYHSCAVTLSGDLYTWGKGDFGILGHGNEVSHWVPKRVNFLMEGIHVSSIACG-PYHTA 430

Query: 389 VLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTD- 447
           V+   G ++ FG   FG LG  DR     V  PR +DSL+     + + G++HT  V + 
Sbjct: 431 VVTSAGQLFTFGDGTFGVLGHGDR---KSVFIPREVDSLKGLRTVRAACGVWHTAAVVEV 487

Query: 448 -----------RGRLFGFGDNERAQLGHDTLRGCLEPT 474
                       G+LF +GD ++++LGH      L PT
Sbjct: 488 MVGSSSSSNCSSGKLFTWGDGDKSRLGHGDKEPKLVPT 525



 Score = 88.2 bits (217), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 77/294 (26%), Positives = 132/294 (44%), Gaps = 25/294 (8%)

Query: 207 PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 266
           P+ +E+   +  + +  G      +T +G   + G  + G+LGHG   +   PK I  L 
Sbjct: 303 PKALESTIVLDVQNIACGGQHAVLVTKQGESFSWGEESEGRLGHGVDSNVQHPKLIDALN 362

Query: 267 EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVV 326
              ++  +A G  +  AVT +G +Y++G G    LGHG +     P+ +  F  +GIHV 
Sbjct: 363 TT-NIELVACGEYHSCAVTLSGDLYTWGKGDFGILGHGNEVSHWVPKRVN-FLMEGIHVS 420

Query: 327 RVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRK 386
            ++ G  H   + S+G ++T+G G  G LGHGD     +P  + SLK    V+       
Sbjct: 421 SIACGPYHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVFIPREVDSLKGLRTVRAACGVWH 480

Query: 387 TFVLVDT------------GSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQ 434
           T  +V+             G ++ +G      LG  D+   +  L P  + +L   +  Q
Sbjct: 481 TAAVVEVMVGSSSSSNCSSGKLFTWGDGDKSRLGHGDK---EPKLVPTCVAALVEPNFCQ 537

Query: 435 ISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI-------FIQEM 481
           ++ G   TV +T  G ++  G     QLG+    G + PT +       F++E+
Sbjct: 538 VACGHSLTVALTTSGHVYTMGSPVYGQLGNPHADGKV-PTRVDGKLHKSFVEEI 590



 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 67/224 (29%), Positives = 102/224 (45%), Gaps = 16/224 (7%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           I  G YHT +++++  +F+ G    GVLGHG   +  +    ++       V+ +    H
Sbjct: 422 IACGPYHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVFIP-REVDSLKGLRTVRAACGVWH 480

Query: 175 AAFVLQ------------SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 222
            A V++            SG++FT GD      GH D   P   P  V AL      QV 
Sbjct: 481 TAAVVEVMVGSSSSSNCSSGKLFTWGDGDKSRLGHGD-KEPKLVPTCVAALVEPNFCQVA 539

Query: 223 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 282
            G + T  LT  GHV+T GS  +GQLG+    D   P  +        V +IA G  ++ 
Sbjct: 540 CGHSLTVALTTSGHVYTMGSPVYGQLGNPHA-DGKVPTRVDGKLHKSFVEEIACGAYHVA 598

Query: 283 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVV 326
            +T    VY++G GSN  LGHG+  D   P  +++ + K +  +
Sbjct: 599 VLTSRTEVYTWGKGSNGRLGHGDADDRNSPTLVESLKDKQVKSI 642



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 53/172 (30%), Positives = 87/172 (50%), Gaps = 6/172 (3%)

Query: 306 QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTL 365
           + D L P+A+++     + V  ++ G +H V +   G  ++WG+   G LGHG + +   
Sbjct: 297 KMDSLLPKALEST--IVLDVQNIACGGQHAVLVTKQGESFSWGEESEGRLGHGVDSNVQH 354

Query: 366 PEPLSSLKS-HLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRIL 424
           P+ + +L + ++ +  C       V + +G +Y +G   FG LG  +  VS  V + R+ 
Sbjct: 355 PKLIDALNTTNIELVACGEYHSCAVTL-SGDLYTWGKGDFGILGHGNE-VSHWVPK-RVN 411

Query: 425 DSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 476
             +   HVS I+ G YHT VVT  G+LF FGD     LGH   +    P E+
Sbjct: 412 FLMEGIHVSSIACGPYHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVFIPREV 463


>gi|118398943|ref|XP_001031798.1| regulator of chromosome condensation (RCC1) [Tetrahymena
           thermophila]
 gi|89286132|gb|EAR84135.1| regulator of chromosome condensation (RCC1) [Tetrahymena
           thermophila SB210]
          Length = 443

 Score =  133 bits (334), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 99/346 (28%), Positives = 155/346 (44%), Gaps = 28/346 (8%)

Query: 125 LISNSSVFSCGSSLCGVLGHGPETT-QCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQ 183
           L  N  V+S G +  G+LGH    +       RI       + Q+S  + H A V + G+
Sbjct: 97  LTHNGEVYSWGKNKGGILGHEDRLSFNMTQPERIEKLLGKKIKQISCGQFHMAAVTEDGE 156

Query: 184 VFTCGDNSSFCCGHR------------------DTNRPIFRPRLVEALKGVPCKQVTAGL 225
           V+T G+      GH                   D  +    P+ +E+L  +  KQV  G+
Sbjct: 157 VYTWGNKEFGKLGHEEELKQEQKIKIKRGNLSHDYLQDSMLPQKIESLGNIKAKQVACGI 216

Query: 226 NFTGFLTIRGHVHTCGSNTHGQLGH-GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 284
            FT  L+  G V+T G N +G LG+  D     TP+ I  L ++   V+I+AG S+  A+
Sbjct: 217 QFTVVLSEDGKVYTFGYNQYGSLGYVSDQNSVTTPQLIKDLNDI---VKISAGYSFCAAI 273

Query: 285 TGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           T  G +Y++G+  N  LG+ +   + +P  +  F  +   +V VS GD  + AL   G +
Sbjct: 274 TKQGKLYTWGNNRNGQLGNSQSLYQTKPSIVTGFGSQN-SIVDVSCGDNFIAALTQQGQL 332

Query: 345 YTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGF 404
           YTWG G  G LGHG++ D   P  +   K  +    C      F+  D   +Y FG    
Sbjct: 333 YTWGFGGDGQLGHGNKSDLYAPRHV-EFKQKIIKIACGGSHAAFITEDN-QLYQFGRGSE 390

Query: 405 GSLGFPDRGVSDKVLR--PRILDSLRAHHVSQISTGLYHTVVVTDR 448
           G LG      S+  +R  P ++   +   V  ++ G  HT+ +T  
Sbjct: 391 GQLGIGQNVASEASIRSTPNLVQYFKGKQVVDVTCGGEHTIAITQE 436



 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 91/355 (25%), Positives = 152/355 (42%), Gaps = 33/355 (9%)

Query: 131 VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDN 190
           V+S G    G LG   E       T I   +   + +V A ++ +  +  +G+V++ G N
Sbjct: 51  VYSWGYGGFGQLGLQNENNYYTP-TEIEVLTDKKIKKVEAGKSISMALTHNGEVYSWGKN 109

Query: 191 SSFCCGHRDT-NRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLG 249
                GH D  +  + +P  +E L G   KQ++ G      +T  G V+T G+   G+LG
Sbjct: 110 KGGILGHEDRLSFNMTQPERIEKLLGKKIKQISCGQFHMAAVTEDGEVYTWGNKEFGKLG 169

Query: 250 HGDTL-------------------DRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 290
           H + L                   D   P+ I  L  +    Q+A G  + + ++ +G V
Sbjct: 170 HEEELKQEQKIKIKRGNLSHDYLQDSMLPQKIESLGNI-KAKQVACGIQFTVVLSEDGKV 228

Query: 291 YSFGSGSNFCLGH-GEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 349
           Y+FG      LG+  +Q+    P+ I+        +V++SAG     A+   G +YTWG 
Sbjct: 229 YTFGYNQYGSLGYVSDQNSVTTPQLIKDLN----DIVKISAGYSFCAAITKQGKLYTWGN 284

Query: 350 GYCGALGHGDEIDKTLPEPLSSLKSHLA-VQVCARKRKTFVLVDTGSVYGFGWMGFGSLG 408
              G LG+   + +T P  ++   S  + V V         L   G +Y +G+ G G LG
Sbjct: 285 NRNGQLGNSQSLYQTKPSIVTGFGSQNSIVDVSCGDNFIAALTQQGQLYTWGFGGDGQLG 344

Query: 409 FPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 463
               G    +  PR ++      + +I+ G  H   +T+  +L+ FG     QLG
Sbjct: 345 ---HGNKSDLYAPRHVEF--KQKIIKIACGGSHAAFITEDNQLYQFGRGSEGQLG 394



 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 67/266 (25%), Positives = 129/266 (48%), Gaps = 25/266 (9%)

Query: 115 QITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPE--TTQCVSFTRINF----------PS 161
           QI+ G++H   ++ +  V++ G+   G LGH  E    Q +   R N           P 
Sbjct: 140 QISCGQFHMAAVTEDGEVYTWGNKEFGKLGHEEELKQEQKIKIKRGNLSHDYLQDSMLPQ 199

Query: 162 AAHVV------QVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 215
               +      QV+        + + G+V+T G N     G+      +  P+L++ L  
Sbjct: 200 KIESLGNIKAKQVACGIQFTVVLSEDGKVYTFGYNQYGSLGYVSDQNSVTTPQLIKDLND 259

Query: 216 VPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA 275
           +   +++AG +F   +T +G ++T G+N +GQLG+  +L +  P  +       S+V ++
Sbjct: 260 IV--KISAGYSFCAAITKQGKLYTWGNNRNGQLGNSQSLYQTKPSIVTGFGSQNSIVDVS 317

Query: 276 AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHV 335
            G +++ A+T  G +Y++G G +  LGHG + D   PR ++ F++K   +++++ G  H 
Sbjct: 318 CGDNFIAALTQQGQLYTWGFGGDGQLGHGNKSDLYAPRHVE-FKQK---IIKIACGGSHA 373

Query: 336 VALDSSGYVYTWGKGYCGALGHGDEI 361
             +     +Y +G+G  G LG G  +
Sbjct: 374 AFITEDNQLYQFGRGSEGQLGIGQNV 399



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 85/302 (28%), Positives = 134/302 (44%), Gaps = 34/302 (11%)

Query: 205 FRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTL--DRPTPKSI 262
           + P  +E L     K+V AG + +  LT  G V++ G N  G LGH D L  +   P+ I
Sbjct: 71  YTPTEIEVLTDKKIKKVEAGKSISMALTHNGEVYSWGKNKGGILGHEDRLSFNMTQPERI 130

Query: 263 APLEEVG-SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ--------------- 306
             L  +G  + QI+ G  +M AVT +G VY++G+     LGH E+               
Sbjct: 131 EKL--LGKKIKQISCGQFHMAAVTEDGEVYTWGNKEFGKLGHEEELKQEQKIKIKRGNLS 188

Query: 307 HDELQ----PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH-GDEI 361
           HD LQ    P+ I++     I   +V+ G +  V L   G VYT+G    G+LG+  D+ 
Sbjct: 189 HDYLQDSMLPQKIESLGN--IKAKQVACGIQFTVVLSEDGKVYTFGYNQYGSLGYVSDQN 246

Query: 362 DKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRP 421
             T P+ +  L     V++ A       +   G +Y +G    G LG      S    +P
Sbjct: 247 SVTTPQLIKDLND--IVKISAGYSFCAAITKQGKLYTWGNNRNGQLG---NSQSLYQTKP 301

Query: 422 RILDSLRAHH-VSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI-FIQ 479
            I+    + + +  +S G      +T +G+L+ +G     QLGH        P  + F Q
Sbjct: 302 SIVTGFGSQNSIVDVSCGDNFIAALTQQGQLYTWGFGGDGQLGHGNKSDLYAPRHVEFKQ 361

Query: 480 EM 481
           ++
Sbjct: 362 KI 363



 Score = 77.8 bits (190), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 54/194 (27%), Positives = 91/194 (46%), Gaps = 20/194 (10%)

Query: 289 VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 348
           +VYS+G G    LG   +++   P  I+    K I   +V AG    +AL  +G VY+WG
Sbjct: 50  IVYSWGYGGFGQLGLQNENNYYTPTEIEVLTDKKIK--KVEAGKSISMALTHNGEVYSWG 107

Query: 349 KGYCGALGHGDEI--DKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGS 406
           K   G LGH D +  + T PE +  L      Q+   +     + + G VY +G   FG 
Sbjct: 108 KNKGGILGHEDRLSFNMTQPERIEKLLGKKIKQISCGQFHMAAVTEDGEVYTWGNKEFGK 167

Query: 407 LGFPDRGVSDKVLR----------------PRILDSLRAHHVSQISTGLYHTVVVTDRGR 450
           LG  +    ++ ++                P+ ++SL      Q++ G+  TVV+++ G+
Sbjct: 168 LGHEEELKQEQKIKIKRGNLSHDYLQDSMLPQKIESLGNIKAKQVACGIQFTVVLSEDGK 227

Query: 451 LFGFGDNERAQLGH 464
           ++ FG N+   LG+
Sbjct: 228 VYTFGYNQYGSLGY 241



 Score = 68.6 bits (166), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 40/122 (32%), Positives = 61/122 (50%), Gaps = 1/122 (0%)

Query: 344 VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 403
           VY+WG G  G LG  +E +   P  +  L      +V A K  +  L   G VY +G   
Sbjct: 51  VYSWGYGGFGQLGLQNENNYYTPTEIEVLTDKKIKKVEAGKSISMALTHNGEVYSWGKNK 110

Query: 404 FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 463
            G LG  DR +S  + +P  ++ L    + QIS G +H   VT+ G ++ +G+ E  +LG
Sbjct: 111 GGILGHEDR-LSFNMTQPERIEKLLGKKIKQISCGQFHMAAVTEDGEVYTWGNKEFGKLG 169

Query: 464 HD 465
           H+
Sbjct: 170 HE 171


>gi|297812127|ref|XP_002873947.1| hypothetical protein ARALYDRAFT_488831 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297319784|gb|EFH50206.1| hypothetical protein ARALYDRAFT_488831 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 1100

 Score =  133 bits (334), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 96/304 (31%), Positives = 145/304 (47%), Gaps = 20/304 (6%)

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
           HA  V + G+ F+ G+ S    GH  D+N  +  P+L++AL     + V  G   +  +T
Sbjct: 318 HAVLVTKQGESFSWGEESEGRLGHGVDSN--VQHPKLIDALSTTNIELVACGEYHSCAVT 375

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
           + G ++T G    G LGHG+ +    PK +  L E   V  IA GP +   VT  G +++
Sbjct: 376 LSGDLYTWGKGDFGILGHGNEVSHWVPKRVNFLMEGIHVSSIACGPYHTAVVTSAGQLFT 435

Query: 293 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL------------DS 340
           FG G+   LGHG++     PR + +   KG+  VR + G  H  A+             S
Sbjct: 436 FGDGTFGVLGHGDRKSVFIPREVDSL--KGLRTVRAACGVWHTAAVVEVMVGSSSSSNCS 493

Query: 341 SGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 400
           SG ++TWG G    LGHGD+  K +P  +++L      QV      T  L  +G VY  G
Sbjct: 494 SGKLFTWGDGDKSRLGHGDKEPKLVPTCVAALVEPNFCQVACGHSLTVALTTSGHVYTMG 553

Query: 401 WMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERA 460
              +G LG P    +D  +  R+   L    V +I+ G YH  V+T R  ++ +G     
Sbjct: 554 SPVYGQLGNPH---ADGKVPTRVEGKLHKSFVEEIACGAYHVAVLTSRTEVYTWGKGSNG 610

Query: 461 QLGH 464
           +LGH
Sbjct: 611 RLGH 614



 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 93/290 (32%), Positives = 138/290 (47%), Gaps = 20/290 (6%)

Query: 99  SVEHSSDIVETSAGNMQ-ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR 156
           +V+H   I   S  N++ +  G YH+  ++ S  +++ G    G+LGHG E +  V   R
Sbjct: 346 NVQHPKLIDALSTTNIELVACGEYHSCAVTLSGDLYTWGKGDFGILGHGNEVSHWVP-KR 404

Query: 157 INF-PSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 215
           +NF     HV  ++    H A V  +GQ+FT GD +    GH D  + +F PR V++LKG
Sbjct: 405 VNFLMEGIHVSSIACGPYHTAVVTSAGQLFTFGDGTFGVLGHGD-RKSVFIPREVDSLKG 463

Query: 216 VPCKQVTAGLNFTGFLT------------IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 263
           +   +   G+  T  +               G + T G     +LGHGD   +  P  +A
Sbjct: 464 LRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDKSRLGHGDKEPKLVPTCVA 523

Query: 264 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGI 323
            L E  +  Q+A G S  +A+T +G VY+ GS     LG+     ++  R      +   
Sbjct: 524 ALVEP-NFCQVACGHSLTVALTTSGHVYTMGSPVYGQLGNPHADGKVPTRVEGKLHKS-- 580

Query: 324 HVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
            V  ++ G  HV  L S   VYTWGKG  G LGHGD  D+  P  + SLK
Sbjct: 581 FVEEIACGAYHVAVLTSRTEVYTWGKGSNGRLGHGDADDRNSPTLVESLK 630



 Score = 99.0 bits (245), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 71/218 (32%), Positives = 106/218 (48%), Gaps = 20/218 (9%)

Query: 271 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 330
           V  IA G  + + VT  G  +S+G  S   LGHG   +   P+ I       I +V  + 
Sbjct: 309 VQYIACGGQHAVLVTKQGESFSWGEESEGRLGHGVDSNVQHPKLIDALSTTNIELV--AC 366

Query: 331 GDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKS--HLAVQVCARKRKTF 388
           G+ H  A+  SG +YTWGKG  G LGHG+E+   +P+ ++ L    H++   C     T 
Sbjct: 367 GEYHSCAVTLSGDLYTWGKGDFGILGHGNEVSHWVPKRVNFLMEGIHVSSIACG-PYHTA 425

Query: 389 VLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTD- 447
           V+   G ++ FG   FG LG  DR     V  PR +DSL+     + + G++HT  V + 
Sbjct: 426 VVTSAGQLFTFGDGTFGVLGHGDR---KSVFIPREVDSLKGLRTVRAACGVWHTAAVVEV 482

Query: 448 -----------RGRLFGFGDNERAQLGHDTLRGCLEPT 474
                       G+LF +GD ++++LGH      L PT
Sbjct: 483 MVGSSSSSNCSSGKLFTWGDGDKSRLGHGDKEPKLVPT 520



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 77/294 (26%), Positives = 132/294 (44%), Gaps = 25/294 (8%)

Query: 207 PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 266
           P+ +E+   +  + +  G      +T +G   + G  + G+LGHG   +   PK I  L 
Sbjct: 298 PKALESTIVLDVQYIACGGQHAVLVTKQGESFSWGEESEGRLGHGVDSNVQHPKLIDALS 357

Query: 267 EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVV 326
              ++  +A G  +  AVT +G +Y++G G    LGHG +     P+ +  F  +GIHV 
Sbjct: 358 TT-NIELVACGEYHSCAVTLSGDLYTWGKGDFGILGHGNEVSHWVPKRVN-FLMEGIHVS 415

Query: 327 RVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRK 386
            ++ G  H   + S+G ++T+G G  G LGHGD     +P  + SLK    V+       
Sbjct: 416 SIACGPYHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVFIPREVDSLKGLRTVRAACGVWH 475

Query: 387 TFVLVDT------------GSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQ 434
           T  +V+             G ++ +G      LG  D+   +  L P  + +L   +  Q
Sbjct: 476 TAAVVEVMVGSSSSSNCSSGKLFTWGDGDKSRLGHGDK---EPKLVPTCVAALVEPNFCQ 532

Query: 435 ISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI-------FIQEM 481
           ++ G   TV +T  G ++  G     QLG+    G + PT +       F++E+
Sbjct: 533 VACGHSLTVALTTSGHVYTMGSPVYGQLGNPHADGKV-PTRVEGKLHKSFVEEI 585



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 87/340 (25%), Positives = 138/340 (40%), Gaps = 21/340 (6%)

Query: 119 GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSASENHAAF 177
           G++  L+      FS G    G LGHG ++   V   + I+  S  ++  V+  E H+  
Sbjct: 316 GQHAVLVTKQGESFSWGEESEGRLGHGVDSN--VQHPKLIDALSTTNIELVACGEYHSCA 373

Query: 178 VLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHV 237
           V  SG ++T G       GH +        R+   ++G+    +  G   T  +T  G +
Sbjct: 374 VTLSGDLYTWGKGDFGILGHGNEVSHWVPKRVNFLMEGIHVSSIACGPYHTAVVTSAGQL 433

Query: 238 HTCGSNTHGQLGHGDTLDRPTPKSIAPLE------------EVGSVVQIAAGPSYMLAVT 285
            T G  T G LGHGD      P+ +  L+               +VV++  G S   +  
Sbjct: 434 FTFGDGTFGVLGHGDRKSVFIPREVDSLKGLRTVRAACGVWHTAAVVEVMVG-SSSSSNC 492

Query: 286 GNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVY 345
            +G ++++G G    LGHG++  +L P  +           +V+ G    VAL +SG+VY
Sbjct: 493 SSGKLFTWGDGDKSRLGHGDKEPKLVPTCVAALVEPNF--CQVACGHSLTVALTTSGHVY 550

Query: 346 TWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFG 405
           T G    G LG+     K        L      ++        VL     VY +G    G
Sbjct: 551 TMGSPVYGQLGNPHADGKVPTRVEGKLHKSFVEEIACGAYHVAVLTSRTEVYTWGKGSNG 610

Query: 406 SLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVV 445
            LG    G +D    P +++SL+   V  I+ G   T  V
Sbjct: 611 RLG---HGDADDRNSPTLVESLKDKQVKSIACGSNFTAAV 647



 Score = 81.6 bits (200), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 67/224 (29%), Positives = 102/224 (45%), Gaps = 16/224 (7%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           I  G YHT +++++  +F+ G    GVLGHG   +  +    ++       V+ +    H
Sbjct: 417 IACGPYHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVFIP-REVDSLKGLRTVRAACGVWH 475

Query: 175 AAFVLQ------------SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 222
            A V++            SG++FT GD      GH D   P   P  V AL      QV 
Sbjct: 476 TAAVVEVMVGSSSSSNCSSGKLFTWGDGDKSRLGHGD-KEPKLVPTCVAALVEPNFCQVA 534

Query: 223 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 282
            G + T  LT  GHV+T GS  +GQLG+    D   P  +        V +IA G  ++ 
Sbjct: 535 CGHSLTVALTTSGHVYTMGSPVYGQLGNPHA-DGKVPTRVEGKLHKSFVEEIACGAYHVA 593

Query: 283 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVV 326
            +T    VY++G GSN  LGHG+  D   P  +++ + K +  +
Sbjct: 594 VLTSRTEVYTWGKGSNGRLGHGDADDRNSPTLVESLKDKQVKSI 637



 Score = 69.7 bits (169), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 53/172 (30%), Positives = 87/172 (50%), Gaps = 6/172 (3%)

Query: 306 QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTL 365
           + D L P+A+++     + V  ++ G +H V +   G  ++WG+   G LGHG + +   
Sbjct: 292 KMDSLLPKALES--TIVLDVQYIACGGQHAVLVTKQGESFSWGEESEGRLGHGVDSNVQH 349

Query: 366 PEPLSSLKS-HLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRIL 424
           P+ + +L + ++ +  C       V + +G +Y +G   FG LG  +  VS  V + R+ 
Sbjct: 350 PKLIDALSTTNIELVACGEYHSCAVTL-SGDLYTWGKGDFGILGHGNE-VSHWVPK-RVN 406

Query: 425 DSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 476
             +   HVS I+ G YHT VVT  G+LF FGD     LGH   +    P E+
Sbjct: 407 FLMEGIHVSSIACGPYHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVFIPREV 458


>gi|326918486|ref|XP_003205519.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3-like
           [Meleagris gallopavo]
          Length = 1050

 Score =  133 bits (334), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 100/303 (33%), Positives = 157/303 (51%), Gaps = 12/303 (3%)

Query: 164 HVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTA 223
           +V +V+   NH+ F+L+ G+V+TCG N+    GH        +P L+ AL G     V  
Sbjct: 35  NVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHESEGS---KPELIGALAGQHIVHVAC 91

Query: 224 GLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPT-PKSIAPLEEVGSVVQIAAGPSYML 282
           G + +  L+ +G V + G+ + GQLG     D  T P+ I  L +  +++QI+ G  + L
Sbjct: 92  GESHSVALSDQGQVFSWGAGSDGQLGLTTIEDAVTVPRLIKKLNQ-QTILQISCGNWHCL 150

Query: 283 AVTGNGVVYSFGSGSNFCLGHGEQ-HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 341
           A+  +G  +++G  S   LG G++   +  P+ +++    GI + +V+AG  H  AL  S
Sbjct: 151 ALAADGQFFTWGQNSYGQLGLGKECPSQASPQRVKSL--DGIPLAQVAAGGAHSFALSLS 208

Query: 342 GYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGW 401
           G V+ WGK   G LG  DE D+  P  +  L+S   V +   +  T VL  +G V+ FG 
Sbjct: 209 GAVFGWGKNSSGQLGLSDERDRESPCHVKLLRSQKVVYISCGEEHTAVLTKSGGVFTFGA 268

Query: 402 MGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV-VTDRGRLFGFGDNERA 460
              G LG     ++D+V  PR +  L    VSQI+ G +HT+  V   G ++ FG   R 
Sbjct: 269 GSCGQLG--HDSMNDEV-NPRRVLELMGSEVSQIACGRHHTLAFVPSSGMIYAFGCGTRG 325

Query: 461 QLG 463
           QLG
Sbjct: 326 QLG 328



 Score =  125 bits (313), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 95/301 (31%), Positives = 145/301 (48%), Gaps = 29/301 (9%)

Query: 193 FCCGHRDTNRP---------IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 243
            C G+    +P         I  P++   +     K+V  G N + FL   G V+TCG N
Sbjct: 2   LCWGYSSFGQPGIGSNLQVIIPEPQVYGFIHDRNVKEVACGGNHSVFLLEDGEVYTCGLN 61

Query: 244 THGQLGHGDTLDRPTPKSIAPLEEVGS-----VVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
           T GQLGH     +P        E +G+     +V +A G S+ +A++  G V+S+G+GS+
Sbjct: 62  TKGQLGHESEGSKP--------ELIGALAGQHIVHVACGESHSVALSDQGQVFSWGAGSD 113

Query: 299 FCLGHGEQHDELQ-PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 357
             LG     D +  PR I+   ++ I  +++S G+ H +AL + G  +TWG+   G LG 
Sbjct: 114 GQLGLTTIEDAVTVPRLIKKLNQQTI--LQISCGNWHCLALAADGQFFTWGQNSYGQLGL 171

Query: 358 GDEI-DKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSD 416
           G E   +  P+ + SL      QV A    +F L  +G+V+G+G    G LG  D    +
Sbjct: 172 GKECPSQASPQRVKSLDGIPLAQVAAGGAHSFALSLSGAVFGWGKNSSGQLGLSDERDRE 231

Query: 417 KVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 476
               P  +  LR+  V  IS G  HT V+T  G +F FG     QLGHD++   + P  +
Sbjct: 232 S---PCHVKLLRSQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRV 288

Query: 477 F 477
            
Sbjct: 289 L 289



 Score =  120 bits (301), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 89/309 (28%), Positives = 146/309 (47%), Gaps = 14/309 (4%)

Query: 102 HSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPS 161
           H  ++ E + G      G +   L+ +  V++CG +  G LGH  E ++      I   +
Sbjct: 32  HDRNVKEVACG------GNHSVFLLEDGEVYTCGLNTKGQLGHESEGSKP---ELIGALA 82

Query: 162 AAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQV 221
             H+V V+  E+H+  +   GQVF+ G  S    G       +  PRL++ L      Q+
Sbjct: 83  GQHIVHVACGESHSVALSDQGQVFSWGAGSDGQLGLTTIEDAVTVPRLIKKLNQQTILQI 142

Query: 222 TAGLNFTGFLTIRGHVHTCGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSY 280
           + G      L   G   T G N++GQLG G +   + +P+ +  L+ +  + Q+AAG ++
Sbjct: 143 SCGNWHCLALAADGQFFTWGQNSYGQLGLGKECPSQASPQRVKSLDGI-PLAQVAAGGAH 201

Query: 281 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 340
             A++ +G V+ +G  S+  LG  ++ D   P  ++  R +   VV +S G+EH   L  
Sbjct: 202 SFALSLSGAVFGWGKNSSGQLGLSDERDRESPCHVKLLRSQ--KVVYISCGEEHTAVLTK 259

Query: 341 SGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGF 399
           SG V+T+G G CG LGH    D+  P  +  L      Q+ C R      +  +G +Y F
Sbjct: 260 SGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVSQIACGRHHTLAFVPSSGMIYAF 319

Query: 400 GWMGFGSLG 408
           G    G LG
Sbjct: 320 GCGTRGQLG 328



 Score =  102 bits (253), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 83/266 (31%), Positives = 124/266 (46%), Gaps = 8/266 (3%)

Query: 114 MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           + +  G  H++ +S+   VFS G+   G LG             I   +   ++Q+S   
Sbjct: 87  VHVACGESHSVALSDQGQVFSWGAGSDGQLGLTTIEDAVTVPRLIKKLNQQTILQISCGN 146

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            H   +   GQ FT G NS    G          P+ V++L G+P  QV AG   +  L+
Sbjct: 147 WHCLALAADGQFFTWGQNSYGQLGLGKECPSQASPQRVKSLDGIPLAQVAAGGAHSFALS 206

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
           + G V   G N+ GQLG  D  DR +P  +  L     VV I+ G  +   +T +G V++
Sbjct: 207 LSGAVFGWGKNSSGQLGLSDERDRESPCHVKLLRS-QKVVYISCGEEHTAVLTKSGGVFT 265

Query: 293 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA-LDSSGYVYTWGKGY 351
           FG+GS   LGH   +DE+ PR +      G  V +++ G  H +A + SSG +Y +G G 
Sbjct: 266 FGAGSCGQLGHDSMNDEVNPRRV--LELMGSEVSQIACGRHHTLAFVPSSGMIYAFGCGT 323

Query: 352 CGALGHGDEIDKTLPEPLSSLKSHLA 377
            G LG G   +   P P   +K H A
Sbjct: 324 RGQLGTGHTCNVKCPSP---VKGHWA 346



 Score = 48.9 bits (115), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 38/144 (26%), Positives = 63/144 (43%), Gaps = 10/144 (6%)

Query: 347 WGKGYCGALGHGDEIDKTLPEPLSSLKSH---LAVQVCARKRKTFVLVDTGSVYGFGWMG 403
           WG    G  G G  +   +PEP      H   +    C      F+L D G VY  G   
Sbjct: 4   WGYSSFGQPGIGSNLQVIIPEPQVYGFIHDRNVKEVACGGNHSVFLLED-GEVYTCGLNT 62

Query: 404 FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 463
            G LG    G      +P ++ +L   H+  ++ G  H+V ++D+G++F +G     QLG
Sbjct: 63  KGQLGHESEGS-----KPELIGALAGQHIVHVACGESHSVALSDQGQVFSWGAGSDGQLG 117

Query: 464 HDTLRGCLEPTEIFIQEMEEDTGL 487
             T+   +    + I+++ + T L
Sbjct: 118 LTTIEDAVTVPRL-IKKLNQQTIL 140


>gi|312381821|gb|EFR27472.1| hypothetical protein AND_05798 [Anopheles darlingi]
          Length = 5197

 Score =  132 bits (333), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 85/245 (34%), Positives = 132/245 (53%), Gaps = 8/245 (3%)

Query: 235  GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEE-VGSVVQIAAGPSYMLAVTGNGVVYSF 293
            G ++ CG  T+G+LG G   + PTPK +  L + V   V + +G  + +A+T +G V+S+
Sbjct: 3293 GKLYACGEGTNGRLGLGHNNNVPTPKQVPILSQYVVKKVAVHSGGKHAMALTLDGKVFSW 3352

Query: 294  GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 353
            G G +  LGHG +    +P+ I+T R K I    ++ G  H  A+ SSG +YTWG G  G
Sbjct: 3353 GEGEDGKLGHGNRLTLEKPKLIETLRTKRIR--DIACGSSHSAAITSSGELYTWGLGEYG 3410

Query: 354  ALGHGDEIDKTLPEPLSSLKSHLAVQVC--ARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 411
             LGHGD   +  P+ +++L  H  VQV   +R  +T  L + G V+ +G   FG LG   
Sbjct: 3411 RLGHGDNCTQLKPKLVTALADHRVVQVACGSRDAQTLCLTEEGLVFSWGDGDFGKLG--- 3467

Query: 412  RGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCL 471
            RG S+    P  ++ L    V QI  G   ++ +T  G ++ +G  +  +LGH T +   
Sbjct: 3468 RGGSEGCSIPHQVERLNGVGVMQIECGAQFSLALTKSGEVWTWGKGDYYRLGHGTDQHVR 3527

Query: 472  EPTEI 476
            +PT I
Sbjct: 3528 KPTPI 3532



 Score =  127 bits (318), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 97/329 (29%), Positives = 154/329 (46%), Gaps = 17/329 (5%)

Query: 155  TRINFPSAAHV------VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPR 208
            +RI  P+          +Q++  E     V   G+++  G  +    G   T+  +  P 
Sbjct: 4396 SRIKMPTPCEALSLLRPIQIAGGEQTLYAVTPDGKLYATGYGAGGRLGIGGTDS-VTTPT 4454

Query: 209  LVEALKGVPCKQV--TAGLNFTGFLTIRGHVHTCGSNTHGQLGHG--DTLDRPTPKSIAP 264
            LVE+L+ V  K+V   +G      L+  G V + G    G+LGHG  D+ DRP  K I  
Sbjct: 4455 LVESLQHVMIKKVAVNSGGKHCLALSSDGEVFSWGEGEDGKLGHGNRDSYDRP--KLIEA 4512

Query: 265  LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH 324
            L  +G V+ IA G ++   +T  G V ++G G    LGHG+  D+LQP+ ++        
Sbjct: 4513 LSGIG-VIDIACGSAHSACITSQGHVLTWGKGRYGRLGHGDSEDQLQPKLVEALLGYRAI 4571

Query: 325  VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARK 384
             +   +GD   + +     V++WG G  G LG G      +P  + SL      +V    
Sbjct: 4572 DIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKVPMKIESLAGLGVTKVECGS 4631

Query: 385  RKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV 444
            + +  L  +GSVY +G   +  LG    G +D V RP+ + +L+   +  I+TG  H V 
Sbjct: 4632 QFSVALTRSGSVYTWGKGDYHRLG---HGNTDHVRRPKKVAALQGKKIISIATGSLHCVA 4688

Query: 445  VTDRGRLFGFGDNERAQLGHDTLRGCLEP 473
             +D G +F +GDN+  QLG  T+     P
Sbjct: 4689 CSDGGEVFTWGDNDEGQLGDGTVSAIQRP 4717



 Score =  125 bits (313), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 91/320 (28%), Positives = 152/320 (47%), Gaps = 10/320 (3%)

Query: 166  VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIF-RPRLVEALKGVPCKQVTAG 224
            V V++   H   +   G+VF+ G+      GH   NR  + RP+L+EAL G+    +  G
Sbjct: 4467 VAVNSGGKHCLALSSDGEVFSWGEGEDGKLGH--GNRDSYDRPKLIEALSGIGVIDIACG 4524

Query: 225  LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSV-VQIAAGPSYMLA 283
               +  +T +GHV T G   +G+LGHGD+ D+  PK +  L    ++ +   +G +  L 
Sbjct: 4525 SAHSACITSQGHVLTWGKGRYGRLGHGDSEDQLQPKLVEALLGYRAIDIACGSGDAQTLC 4584

Query: 284  VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 343
            +T +  V+S+G G    LG G       P  I++    G+ V +V  G +  VAL  SG 
Sbjct: 4585 ITDDDNVWSWGDGDYGKLGRGGSDGCKVPMKIESL--AGLGVTKVECGSQFSVALTRSGS 4642

Query: 344  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 403
            VYTWGKG    LGHG+      P+ +++L+    + +           D G V+ +G   
Sbjct: 4643 VYTWGKGDYHRLGHGNTDHVRRPKKVAALQGKKIISIATGSLHCVACSDGGEVFTWGDND 4702

Query: 404  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 463
             G LG    G    + RPR++ SL+  H+ ++  G  HT+ ++               L 
Sbjct: 4703 EGQLG---DGTVSAIQRPRLVQSLQGKHIVKVICGSAHTLALSTYQLSEAVRPPPSPPLE 4759

Query: 464  HDTLRGCLEPTEIFIQEMEE 483
            +D +R  + P ++ +  ++E
Sbjct: 4760 YDLVRD-IAPEDVLVYSIKE 4778



 Score =  121 bits (304), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 86/319 (26%), Positives = 144/319 (45%), Gaps = 17/319 (5%)

Query: 155  TRINFPSAAHV------VQVSASENHAAFVLQSGQVFTCGD--NSSFCCGHRDTNRPIFR 206
            +++  P+ + V      + ++        V Q G+++ CG+  N     GH   N  +  
Sbjct: 3260 SKVKLPTYSSVLSQLKPIHIAGGSKSLFIVSQDGKLYACGEGTNGRLGLGH---NNNVPT 3316

Query: 207  PRLVEALKGVPCKQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP 264
            P+ V  L     K+V   +G      LT+ G V + G    G+LGHG+ L    PK I  
Sbjct: 3317 PKQVPILSQYVVKKVAVHSGGKHAMALTLDGKVFSWGEGEDGKLGHGNRLTLEKPKLIET 3376

Query: 265  LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH 324
            L     +  IA G S+  A+T +G +Y++G G    LGHG+   +L+P+ +       + 
Sbjct: 3377 LR-TKRIRDIACGSSHSAAITSSGELYTWGLGEYGRLGHGDNCTQLKPKLVTALADHRVV 3435

Query: 325  VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARK 384
             V   + D   + L   G V++WG G  G LG G     ++P  +  L     +Q+    
Sbjct: 3436 QVACGSRDAQTLCLTEEGLVFSWGDGDFGKLGRGGSEGCSIPHQVERLNGVGVMQIECGA 3495

Query: 385  RKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV 444
            + +  L  +G V+ +G   +  LG    G    V +P  +  LR   V  ++ G  H + 
Sbjct: 3496 QFSLALTKSGEVWTWGKGDYYRLG---HGTDQHVRKPTPIQGLRGKKVIHVAVGALHCLA 3552

Query: 445  VTDRGRLFGFGDNERAQLG 463
            VTD G+++ +GDN+  Q G
Sbjct: 3553 VTDSGQVYAWGDNDHGQQG 3571



 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 97/324 (29%), Positives = 152/324 (46%), Gaps = 16/324 (4%)

Query: 142 LGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTN 201
             HG  +T   S   I  P+   V QV+ SE     +  +GQV +   ++   C   DT 
Sbjct: 563 FAHG--STSRYSTATIELPAGVQVRQVACSETSIYILTTTGQVLSLQHSN---CHTPDTT 617

Query: 202 RPIFRPRLVEALKGVPCKQVTAGLN--FTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTP 259
            P    + +E L+ V   Q+ A         LT  G V + G+   G+LGHGDT  +  P
Sbjct: 618 AP----KPIEGLESVNIVQLAAHCEGRHVLALTATGDVFSWGNGEGGRLGHGDTSSKDIP 673

Query: 260 KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFR 319
             I  L E   V  +  G SY  A+T  G +Y++G G+   LGHG   D+  P  +Q  +
Sbjct: 674 TRIVALAE-RQVTGVFCGSSYSAAITAAGELYTWGRGTYGRLGHGNSEDKHLPTIVQVLK 732

Query: 320 RKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK-SHLAV 378
           ++ +  V +  GD H + +  +G VY WG G  G LG+G     ++P  +   + S  AV
Sbjct: 733 QQRVIHVALGCGDAHSLCVTDTGIVYAWGDGDFGKLGNGTCNGSSVPVAIELPQCSDGAV 792

Query: 379 QVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTG 438
           +V +    +  L   G+VY +   G G  G    G S+    P+ + +L   ++  ++ G
Sbjct: 793 KVFSGSHFSVALGRDGTVYSW---GKGHGGRLGHGHSEHTASPKAIQALEGKNIVDLAVG 849

Query: 439 LYHTVVVTDRGRLFGFGDNERAQL 462
           L H + +T  G L+G+G N+  QL
Sbjct: 850 LAHCLALTASGELYGWGRNDFQQL 873



 Score =  112 bits (280), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 94/339 (27%), Positives = 156/339 (46%), Gaps = 21/339 (6%)

Query: 114  MQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHG-----PETTQCVSFTRINFPSAAHVVQ 167
            + I  G     ++S +  +++CG    G LG G     P   Q    ++         V 
Sbjct: 3277 IHIAGGSKSLFIVSQDGKLYACGEGTNGRLGLGHNNNVPTPKQVPILSQY----VVKKVA 3332

Query: 168  VSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNR-PIFRPRLVEALKGVPCKQVTAGLN 226
            V +   HA  +   G+VF+ G+      GH   NR  + +P+L+E L+    + +  G +
Sbjct: 3333 VHSGGKHAMALTLDGKVFSWGEGEDGKLGH--GNRLTLEKPKLIETLRTKRIRDIACGSS 3390

Query: 227  FTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGP--SYMLAV 284
             +  +T  G ++T G   +G+LGHGD   +  PK +  L +   VVQ+A G   +  L +
Sbjct: 3391 HSAAITSSGELYTWGLGEYGRLGHGDNCTQLKPKLVTALAD-HRVVQVACGSRDAQTLCL 3449

Query: 285  TGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
            T  G+V+S+G G    LG G       P  ++  R  G+ V+++  G +  +AL  SG V
Sbjct: 3450 TEEGLVFSWGDGDFGKLGRGGSEGCSIPHQVE--RLNGVGVMQIECGAQFSLALTKSGEV 3507

Query: 345  YTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGF 404
            +TWGKG    LGHG +     P P+  L+    + V         + D+G VY +G    
Sbjct: 3508 WTWGKGDYYRLGHGTDQHVRKPTPIQGLRGKKVIHVAVGALHCLAVTDSGQVYAWGDNDH 3567

Query: 405  GSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV 443
            G  G  +  V+ K   P ++  L    V++++ G  H+V
Sbjct: 3568 GQQGSGNTIVNKK---PSLVLGLDGIFVNRVACGSSHSV 3603



 Score = 99.4 bits (246), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 67/248 (27%), Positives = 121/248 (48%), Gaps = 10/248 (4%)

Query: 233  IRGHVHTCGSNTHGQLG--HGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 290
            +   V   G N   QLG   G  +  PT  S+  L ++  +  IA G   +  V+ +G +
Sbjct: 3239 LSSKVLVWGLNDKEQLGGLKGSKVKLPTYSSV--LSQLKPI-HIAGGSKSLFIVSQDGKL 3295

Query: 291  YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKG 350
            Y+ G G+N  LG G  ++   P+ +    +  +  V V +G +H +AL   G V++WG+G
Sbjct: 3296 YACGEGTNGRLGLGHNNNVPTPKQVPILSQYVVKKVAVHSGGKHAMALTLDGKVFSWGEG 3355

Query: 351  YCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFP 410
              G LGHG+ +    P+ + +L++     +      +  +  +G +Y +G   +G LG  
Sbjct: 3356 EDGKLGHGNRLTLEKPKLIETLRTKRIRDIACGSSHSAAITSSGELYTWGLGEYGRLGHG 3415

Query: 411  DRGVSDKVLRPRILDSLRAHHVSQISTGL--YHTVVVTDRGRLFGFGDNERAQLGHDTLR 468
            D       L+P+++ +L  H V Q++ G     T+ +T+ G +F +GD +  +LG     
Sbjct: 3416 DNCTQ---LKPKLVTALADHRVVQVACGSRDAQTLCLTEEGLVFSWGDGDFGKLGRGGSE 3472

Query: 469  GCLEPTEI 476
            GC  P ++
Sbjct: 3473 GCSIPHQV 3480



 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 83/284 (29%), Positives = 124/284 (43%), Gaps = 14/284 (4%)

Query: 113  NMQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTR---INFPSAAHVVQV 168
             + + +G  H L L S+  VFS G    G LGHG       S+ R   I   S   V+ +
Sbjct: 4466 KVAVNSGGKHCLALSSDGEVFSWGEGEDGKLGHGNRD----SYDRPKLIEALSGIGVIDI 4521

Query: 169  SASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFT 228
            +    H+A +   G V T G       GH D+   + +P+LVEAL G     +  G    
Sbjct: 4522 ACGSAHSACITSQGHVLTWGKGRYGRLGHGDSEDQL-QPKLVEALLGYRAIDIACGSGDA 4580

Query: 229  GFLTIRG--HVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTG 286
              L I    +V + G   +G+LG G +     P  I  L  +G V ++  G  + +A+T 
Sbjct: 4581 QTLCITDDDNVWSWGDGDYGKLGRGGSDGCKVPMKIESLAGLG-VTKVECGSQFSVALTR 4639

Query: 287  NGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYT 346
            +G VY++G G    LGHG      +P+ +     +G  ++ ++ G  H VA    G V+T
Sbjct: 4640 SGSVYTWGKGDYHRLGHGNTDHVRRPKKVAAL--QGKKIISIATGSLHCVACSDGGEVFT 4697

Query: 347  WGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVL 390
            WG    G LG G       P  + SL+    V+V      T  L
Sbjct: 4698 WGDNDEGQLGDGTVSAIQRPRLVQSLQGKHIVKVICGSAHTLAL 4741



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 70/241 (29%), Positives = 120/241 (49%), Gaps = 12/241 (4%)

Query: 241  GSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 297
            G N  GQLG   G  +  PTP ++++ L  +    QIA G   + AVT +G +Y+ G G+
Sbjct: 4383 GHNHRGQLGGLDGSRIKMPTPCEALSLLRPI----QIAGGEQTLYAVTPDGKLYATGYGA 4438

Query: 298  NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 357
               LG G       P  +++ +   I  V V++G +H +AL S G V++WG+G  G LGH
Sbjct: 4439 GGRLGIGGTDSVTTPTLVESLQHVMIKKVAVNSGGKHCLALSSDGEVFSWGEGEDGKLGH 4498

Query: 358  GDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDK 417
            G+      P+ + +L     + +      +  +   G V  +G   +G LG  D   S+ 
Sbjct: 4499 GNRDSYDRPKLIEALSGIGVIDIACGSAHSACITSQGHVLTWGKGRYGRLGHGD---SED 4555

Query: 418  VLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTE 475
             L+P+++++L  +    I+  +G   T+ +TD   ++ +GD +  +LG     GC  P +
Sbjct: 4556 QLQPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKVPMK 4615

Query: 476  I 476
            I
Sbjct: 4616 I 4616



 Score = 76.3 bits (186), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 61/216 (28%), Positives = 102/216 (47%), Gaps = 19/216 (8%)

Query: 271 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH--DELQPRAIQTFRRKGIHVVRV 328
           V Q+A   + +  +T  G V S        L H   H  D   P+ I+    + +++V++
Sbjct: 584 VRQVACSETSIYILTTTGQVLS--------LQHSNCHTPDTTAPKPIEGL--ESVNIVQL 633

Query: 329 SAGDE--HVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRK 386
           +A  E  HV+AL ++G V++WG G  G LGHGD   K +P  + +L       V      
Sbjct: 634 AAHCEGRHVLALTATGDVFSWGNGEGGRLGHGDTSSKDIPTRIVALAERQVTGVFCGSSY 693

Query: 387 TFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGL--YHTVV 444
           +  +   G +Y +G   +G LG    G S+    P I+  L+   V  ++ G    H++ 
Sbjct: 694 SAAITAAGELYTWGRGTYGRLG---HGNSEDKHLPTIVQVLKQQRVIHVALGCGDAHSLC 750

Query: 445 VTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQE 480
           VTD G ++ +GD +  +LG+ T  G   P  I + +
Sbjct: 751 VTDTGIVYAWGDGDFGKLGNGTCNGSSVPVAIELPQ 786



 Score = 69.7 bits (169), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 68/233 (29%), Positives = 112/233 (48%), Gaps = 6/233 (2%)

Query: 119 GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
           GR+   L +   VFS G+   G LGHG  +++ +  TRI   +   V  V    +++A +
Sbjct: 639 GRHVLALTATGDVFSWGNGEGGRLGHGDTSSKDIP-TRIVALAERQVTGVFCGSSYSAAI 697

Query: 179 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL--TIRGH 236
             +G+++T G  +    GH ++      P +V+ LK      V  G      L  T  G 
Sbjct: 698 TAAGELYTWGRGTYGRLGHGNSEDKHL-PTIVQVLKQQRVIHVALGCGDAHSLCVTDTGI 756

Query: 237 VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 296
           V+  G    G+LG+G       P +I   +     V++ +G  + +A+  +G VYS+G G
Sbjct: 757 VYAWGDGDFGKLGNGTCNGSSVPVAIELPQCSDGAVKVFSGSHFSVALGRDGTVYSWGKG 816

Query: 297 SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 349
               LGHG       P+AIQ    +G ++V ++ G  H +AL +SG +Y WG+
Sbjct: 817 HGGRLGHGHSEHTASPKAIQAL--EGKNIVDLAVGLAHCLALTASGELYGWGR 867


>gi|168018623|ref|XP_001761845.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162686900|gb|EDQ73286.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 1131

 Score =  132 bits (333), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 102/326 (31%), Positives = 156/326 (47%), Gaps = 24/326 (7%)

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            HAA V + G+VFT G+ S    GH   +  +  P+LVEAL     + V  G      +T
Sbjct: 322 KHAALVTKQGEVFTWGEESGGRLGH-GVDCDVSHPQLVEALASSTTEVVACGEYHACAVT 380

Query: 233 IRGHVHTCGSNTH--GQLGHGDTLDRPTPKSI-APLEEVGSVVQIAAGPSYMLAVTGNGV 289
           + G +++ G  TH  G LGHG+ +    PK +  PLE +  V  IA GP +   VT  G+
Sbjct: 381 LSGDLYSWGDGTHNLGLLGHGNDISHWIPKRVNGPLEGL-RVASIACGPWHTALVTTTGL 439

Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL----------- 338
           +++FG G+   LGH ++     PR +++   KG+  VR + G  H  A+           
Sbjct: 440 LFTFGDGTFGVLGHNDRKSAYSPREVESL--KGLRTVRAACGVWHTAAVVEVMVGSSSAG 497

Query: 339 -DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVY 397
             SSG ++TWG G  G LGHGD+  + +P  +++L  H   QV      T  L   G V+
Sbjct: 498 SCSSGKLFTWGDGEKGRLGHGDKEQRLVPTCVAALVDHNFRQVACGYSLTVALTTKGGVF 557

Query: 398 GFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDN 457
             G   +G LG P    +D  L   +   L   +V  I+ G +H  V+T    ++ +G  
Sbjct: 558 TMGSSTYGQLGDPQ---ADGKLPGLVEGKLVEAYVEDIACGAHHVAVLTHNSEVYTWGKG 614

Query: 458 ERAQLGHDTLRGCLEPTEIFIQEMEE 483
              +LGH  L     PT   ++ ++E
Sbjct: 615 ANGRLGHGDLEDRNTPT--LVEALKE 638



 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 85/274 (31%), Positives = 128/274 (46%), Gaps = 21/274 (7%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSL--CGVLGHGPETTQCVSFTRINFP-SAAHVVQVSAS 171
           +  G YH   ++ S  ++S G      G+LGHG + +  +   R+N P     V  ++  
Sbjct: 369 VACGEYHACAVTLSGDLYSWGDGTHNLGLLGHGNDISHWIP-KRVNGPLEGLRVASIACG 427

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
             H A V  +G +FT GD +    GH D  +  + PR VE+LKG+   +   G+  T  +
Sbjct: 428 PWHTALVTTTGLLFTFGDGTFGVLGHND-RKSAYSPREVESLKGLRTVRAACGVWHTAAV 486

Query: 232 T------------IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPS 279
                          G + T G    G+LGHGD   R  P  +A L +  +  Q+A G S
Sbjct: 487 VEVMVGSSSAGSCSSGKLFTWGDGEKGRLGHGDKEQRLVPTCVAALVD-HNFRQVACGYS 545

Query: 280 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 339
             +A+T  G V++ GS +   LG   Q D   P  ++  +    +V  ++ G  HV  L 
Sbjct: 546 LTVALTTKGGVFTMGSSTYGQLGD-PQADGKLPGLVEG-KLVEAYVEDIACGAHHVAVLT 603

Query: 340 SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
            +  VYTWGKG  G LGHGD  D+  P  + +LK
Sbjct: 604 HNSEVYTWGKGANGRLGHGDLEDRNTPTLVEALK 637



 Score = 85.1 bits (209), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 76/277 (27%), Positives = 123/277 (44%), Gaps = 15/277 (5%)

Query: 207 PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 266
           P+ +E+   +  + +  G      +T +G V T G  + G+LGHG   D   P+ +  L 
Sbjct: 303 PKPLESALVLDVQLIACGGKHAALVTKQGEVFTWGEESGGRLGHGVDCDVSHPQLVEALA 362

Query: 267 EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNF--CLGHGEQHDELQPRAIQTFRRKGIH 324
              + V +A G  +  AVT +G +YS+G G++    LGHG       P+ +     +G+ 
Sbjct: 363 SSTTEV-VACGEYHACAVTLSGDLYSWGDGTHNLGLLGHGNDISHWIPKRVNG-PLEGLR 420

Query: 325 VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARK 384
           V  ++ G  H   + ++G ++T+G G  G LGH D      P  + SLK    V+     
Sbjct: 421 VASIACGPWHTALVTTTGLLFTFGDGTFGVLGHNDRKSAYSPREVESLKGLRTVRAACGV 480

Query: 385 RKTFVLVDT----------GSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQ 434
             T  +V+            S   F W G G  G    G  ++ L P  + +L  H+  Q
Sbjct: 481 WHTAAVVEVMVGSSSAGSCSSGKLFTW-GDGEKGRLGHGDKEQRLVPTCVAALVDHNFRQ 539

Query: 435 ISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCL 471
           ++ G   TV +T +G +F  G +   QLG     G L
Sbjct: 540 VACGYSLTVALTTKGGVFTMGSSTYGQLGDPQADGKL 576



 Score = 75.1 bits (183), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 67/228 (29%), Positives = 101/228 (44%), Gaps = 16/228 (7%)

Query: 116 ITTGRYHTLLISNSSV-FSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           I  G +HT L++ + + F+ G    GVLGH  +     S   +        V+ +    H
Sbjct: 424 IACGPWHTALVTTTGLLFTFGDGTFGVLGHN-DRKSAYSPREVESLKGLRTVRAACGVWH 482

Query: 175 AAFVLQ------------SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 222
            A V++            SG++FT GD      GH D  + +  P  V AL     +QV 
Sbjct: 483 TAAVVEVMVGSSSAGSCSSGKLFTWGDGEKGRLGHGDKEQRLV-PTCVAALVDHNFRQVA 541

Query: 223 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 282
            G + T  LT +G V T GS+T+GQLG     D   P  +        V  IA G  ++ 
Sbjct: 542 CGYSLTVALTTKGGVFTMGSSTYGQLGDPQA-DGKLPGLVEGKLVEAYVEDIACGAHHVA 600

Query: 283 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 330
            +T N  VY++G G+N  LGHG+  D   P  ++  + K +  +   A
Sbjct: 601 VLTHNSEVYTWGKGANGRLGHGDLEDRNTPTLVEALKEKQVKSIACGA 648



 Score = 66.6 bits (161), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 53/188 (28%), Positives = 85/188 (45%), Gaps = 10/188 (5%)

Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 349
           ++  GSG    L      D L P+ +++     + V  ++ G +H   +   G V+TWG+
Sbjct: 287 IHRIGSGGAINL------DALLPKPLESALV--LDVQLIACGGKHAALVTKQGEVFTWGE 338

Query: 350 GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGF 409
              G LGHG + D + P+ + +L S     V   +     +  +G +Y +G  G  +LG 
Sbjct: 339 ESGGRLGHGVDCDVSHPQLVEALASSTTEVVACGEYHACAVTLSGDLYSWG-DGTHNLGL 397

Query: 410 PDRGVSDKVLRP-RILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLR 468
              G       P R+   L    V+ I+ G +HT +VT  G LF FGD     LGH+  +
Sbjct: 398 LGHGNDISHWIPKRVNGPLEGLRVASIACGPWHTALVTTTGLLFTFGDGTFGVLGHNDRK 457

Query: 469 GCLEPTEI 476
               P E+
Sbjct: 458 SAYSPREV 465


>gi|627469|pir||B38919 hypothetical protein 2 - human (fragment)
 gi|40788957|dbj|BAA04945.2| KIAA0032 [Homo sapiens]
          Length = 1054

 Score =  132 bits (333), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 96/301 (31%), Positives = 147/301 (48%), Gaps = 29/301 (9%)

Query: 193 FCCGHRDTNRP---------IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 243
            C G+    +P         +  P++   +     K+V  G N + FL   G V+TCG N
Sbjct: 6   LCWGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLN 65

Query: 244 THGQLGHGDTLDRPTPKSIAPLEEVGS-----VVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
           T GQLGH    ++P        E++G+     ++ +A G S+ LA++  G ++S+G+GS+
Sbjct: 66  TKGQLGHEREGNKP--------EQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSD 117

Query: 299 FCLGHGEQHDELQ-PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 357
             LG     D +  PR IQ   ++ I  ++VS G+ H +AL + G  +TWGK   G LG 
Sbjct: 118 GQLGLMTTEDSVAVPRLIQKLNQQTI--LQVSCGNWHCLALAADGQFFTWGKNSHGQLGL 175

Query: 358 GDEI-DKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSD 416
           G E   +  P+ + SL+     QV A    +F L  +G+V+G+G    G LG  D    +
Sbjct: 176 GKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRE 235

Query: 417 KVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 476
               P  +  LR   V  IS G  HT V+T  G +F FG     QLGHD++   + P  +
Sbjct: 236 S---PCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRV 292

Query: 477 F 477
            
Sbjct: 293 L 293



 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 98/309 (31%), Positives = 159/309 (51%), Gaps = 14/309 (4%)

Query: 159 FPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVP 217
           F S   V +V+   NH+ F+L+ G+V+TCG N+    GH R+ N+P      + AL    
Sbjct: 34  FISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGNKP----EQIGALADQH 89

Query: 218 CKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDR-PTPKSIAPLEEVGSVVQIAA 276
              V  G + +  L+ RG + + G+ + GQLG   T D    P+ I  L +  +++Q++ 
Sbjct: 90  IIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQ-QTILQVSC 148

Query: 277 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH-DELQPRAIQTFRRKGIHVVRVSAGDEHV 335
           G  + LA+  +G  +++G  S+  LG G++   +  P+ +++   +GI + +V+AG  H 
Sbjct: 149 GNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSL--EGIPLAQVAAGGAHS 206

Query: 336 VALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGS 395
            AL  SG V+ WG    G LG  DE D+  P  +  L++   V +   +  T VL  +G 
Sbjct: 207 FALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGG 266

Query: 396 VYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV-VTDRGRLFGF 454
           V+ FG    G LG     ++D+V  PR +  L    V+QI+ G  HT+  V   G ++ F
Sbjct: 267 VFTFGAGSCGQLG--HDSMNDEV-NPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAF 323

Query: 455 GDNERAQLG 463
           G   R QLG
Sbjct: 324 GCGARGQLG 332



 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 94/320 (29%), Positives = 150/320 (46%), Gaps = 11/320 (3%)

Query: 119 GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
           G +   L+ +  V++CG +  G LGH  E  +     +I   +  H++ V+  E+H+  +
Sbjct: 47  GNHSVFLLEDGEVYTCGLNTKGQLGHEREGNKP---EQIGALADQHIIHVACGESHSLAL 103

Query: 179 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVH 238
              GQ+F+ G  S    G   T   +  PRL++ L      QV+ G      L   G   
Sbjct: 104 SDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFF 163

Query: 239 TCGSNTHGQLGHGDTL-DRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 297
           T G N+HGQLG G     + +P+ +  LE +  + Q+AAG ++  A++ +G V+ +G  +
Sbjct: 164 TWGKNSHGQLGLGKEFPSQASPQRVRSLEGI-PLAQVAAGGAHSFALSLSGAVFGWGMNN 222

Query: 298 NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 357
              LG  ++ D   P  ++  R +   VV +S G+EH   L  SG V+T+G G CG LGH
Sbjct: 223 AGQLGLSDEKDRESPCHVKLLRTQ--KVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGH 280

Query: 358 GDEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSD 416
               D+  P  +  L      Q+ C R+     +  +G +Y FG    G LG    G + 
Sbjct: 281 DSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLG---TGHTC 337

Query: 417 KVLRPRILDSLRAHHVSQIS 436
            V  P  +    A H  Q+S
Sbjct: 338 NVKCPSPVKGYWAAHSGQLS 357



 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 91/295 (30%), Positives = 136/295 (46%), Gaps = 22/295 (7%)

Query: 114 MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSAS 171
           + +  G  H+L +S+   +FS G+   G LG    T   V+  R I   +   ++QVS  
Sbjct: 91  IHVACGESHSLALSDRGQLFSWGAGSDGQLGLM-TTEDSVAVPRLIQKLNQQTILQVSCG 149

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
             H   +   GQ FT G NS    G          P+ V +L+G+P  QV AG   +  L
Sbjct: 150 NWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFAL 209

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
           ++ G V   G N  GQLG  D  DR +P  +  L     VV I+ G  +   +T +G V+
Sbjct: 210 SLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLR-TQKVVYISCGEEHTAVLTKSGGVF 268

Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA-LDSSGYVYTWGKG 350
           +FG+GS   LGH   +DE+ PR +      G  V +++ G +H +A + SSG +Y +G G
Sbjct: 269 TFGAGSCGQLGHDSMNDEVNPRRV--LELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCG 326

Query: 351 YCGALGHGDEIDKTLPEPLS---------------SLKSHLAVQVCARKRKTFVL 390
             G LG G   +   P P+                  K H+  Q+ +   +TFVL
Sbjct: 327 ARGQLGTGHTCNVKCPSPVKGYWAAHSGQLSARADRFKYHIVKQIFSGGDQTFVL 381


>gi|395834129|ref|XP_003790065.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 [Otolemur
           garnettii]
          Length = 1050

 Score =  132 bits (333), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 96/301 (31%), Positives = 147/301 (48%), Gaps = 29/301 (9%)

Query: 193 FCCGHRDTNRP---------IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 243
            C G+    +P         +  P++   +     K+V  G N + FL   G V+TCG N
Sbjct: 2   LCWGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEGGEVYTCGLN 61

Query: 244 THGQLGHGDTLDRPTPKSIAPLEEVGS-----VVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
           T GQLGH    ++P        E++G+     ++ +A G S+ LA++  G ++S+G+GS+
Sbjct: 62  TKGQLGHEREGNKP--------EQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSD 113

Query: 299 FCLGHGEQHDELQ-PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 357
             LG     D +  PR IQ   ++ I  ++VS G+ H +AL + G  +TWGK   G LG 
Sbjct: 114 GQLGLTTTEDSVAVPRLIQKLNQQTI--LQVSCGNWHCLALAADGQFFTWGKNSHGQLGL 171

Query: 358 GDEI-DKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSD 416
           G E   +  P+ + SL+     QV A    +F L  +G+V+G+G    G LG  D    +
Sbjct: 172 GKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRE 231

Query: 417 KVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 476
               P  +  LR   V  IS G  HT V+T  G +F FG     QLGHD++   + P  +
Sbjct: 232 S---PCHVKLLRTQKVVYISCGEEHTAVLTKNGGVFTFGAGSCGQLGHDSMNDEVNPRRV 288

Query: 477 F 477
            
Sbjct: 289 L 289



 Score =  125 bits (315), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 98/309 (31%), Positives = 158/309 (51%), Gaps = 14/309 (4%)

Query: 159 FPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVP 217
           F S   V +V+   NH+ F+L+ G+V+TCG N+    GH R+ N+P      + AL    
Sbjct: 30  FISDRSVKEVACGGNHSVFLLEGGEVYTCGLNTKGQLGHEREGNKP----EQIGALADQH 85

Query: 218 CKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDR-PTPKSIAPLEEVGSVVQIAA 276
              V  G + +  L+ RG + + G+ + GQLG   T D    P+ I  L +  +++Q++ 
Sbjct: 86  IIHVACGESHSLALSDRGQLFSWGAGSDGQLGLTTTEDSVAVPRLIQKLNQ-QTILQVSC 144

Query: 277 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH-DELQPRAIQTFRRKGIHVVRVSAGDEHV 335
           G  + LA+  +G  +++G  S+  LG G++   +  P+ +++   +GI + +V+AG  H 
Sbjct: 145 GNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSL--EGIPLAQVAAGGAHS 202

Query: 336 VALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGS 395
            AL  SG V+ WG    G LG  DE D+  P  +  L++   V +   +  T VL   G 
Sbjct: 203 FALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKNGG 262

Query: 396 VYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV-VTDRGRLFGF 454
           V+ FG    G LG     ++D+V  PR +  L    V+QI+ G  HT+  V   G ++ F
Sbjct: 263 VFTFGAGSCGQLG--HDSMNDEV-NPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAF 319

Query: 455 GDNERAQLG 463
           G   R QLG
Sbjct: 320 GCGARGQLG 328



 Score =  121 bits (304), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 93/320 (29%), Positives = 149/320 (46%), Gaps = 11/320 (3%)

Query: 119 GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
           G +   L+    V++CG +  G LGH  E  +     +I   +  H++ V+  E+H+  +
Sbjct: 43  GNHSVFLLEGGEVYTCGLNTKGQLGHEREGNKP---EQIGALADQHIIHVACGESHSLAL 99

Query: 179 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVH 238
              GQ+F+ G  S    G   T   +  PRL++ L      QV+ G      L   G   
Sbjct: 100 SDRGQLFSWGAGSDGQLGLTTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFF 159

Query: 239 TCGSNTHGQLGHGDTL-DRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 297
           T G N+HGQLG G     + +P+ +  LE +  + Q+AAG ++  A++ +G V+ +G  +
Sbjct: 160 TWGKNSHGQLGLGKEFPSQASPQRVRSLEGI-PLAQVAAGGAHSFALSLSGAVFGWGMNN 218

Query: 298 NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 357
              LG  ++ D   P  ++  R +   VV +S G+EH   L  +G V+T+G G CG LGH
Sbjct: 219 AGQLGLSDEKDRESPCHVKLLRTQ--KVVYISCGEEHTAVLTKNGGVFTFGAGSCGQLGH 276

Query: 358 GDEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSD 416
               D+  P  +  L      Q+ C R+     +  +G +Y FG    G LG    G + 
Sbjct: 277 DSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLG---TGHTC 333

Query: 417 KVLRPRILDSLRAHHVSQIS 436
            V  P  +    A H  Q+S
Sbjct: 334 NVKCPSPVKGYWAAHSGQLS 353



 Score =  108 bits (271), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 92/295 (31%), Positives = 136/295 (46%), Gaps = 22/295 (7%)

Query: 114 MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSAS 171
           + +  G  H+L +S+   +FS G+   G LG    T   V+  R I   +   ++QVS  
Sbjct: 87  IHVACGESHSLALSDRGQLFSWGAGSDGQLGL-TTTEDSVAVPRLIQKLNQQTILQVSCG 145

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
             H   +   GQ FT G NS    G          P+ V +L+G+P  QV AG   +  L
Sbjct: 146 NWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFAL 205

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
           ++ G V   G N  GQLG  D  DR +P  +  L     VV I+ G  +   +T NG V+
Sbjct: 206 SLSGAVFGWGMNNAGQLGLSDEKDRESPCHVK-LLRTQKVVYISCGEEHTAVLTKNGGVF 264

Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA-LDSSGYVYTWGKG 350
           +FG+GS   LGH   +DE+ PR +      G  V +++ G +H +A + SSG +Y +G G
Sbjct: 265 TFGAGSCGQLGHDSMNDEVNPRRV--LELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCG 322

Query: 351 YCGALGHGDEIDKTLPEPLS---------------SLKSHLAVQVCARKRKTFVL 390
             G LG G   +   P P+                  K H+  Q+ +   +TFVL
Sbjct: 323 ARGQLGTGHTCNVKCPSPVKGYWAAHSGQLSARPDRFKYHIVKQIFSGGDQTFVL 377


>gi|403263478|ref|XP_003924058.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 [Saimiri
           boliviensis boliviensis]
          Length = 1050

 Score =  132 bits (333), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 96/301 (31%), Positives = 147/301 (48%), Gaps = 29/301 (9%)

Query: 193 FCCGHRDTNRP---------IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 243
            C G+    +P         +  P++   +     K+V  G N + FL   G V+TCG N
Sbjct: 2   LCWGYWSLGQPGISTSLQGIVAEPQVCGFISDRTVKEVACGGNHSVFLLEDGEVYTCGLN 61

Query: 244 THGQLGHGDTLDRPTPKSIAPLEEVGS-----VVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
           T GQLGH    ++P        E++G+     ++ +A G S+ LA++  G ++S+G+GS+
Sbjct: 62  TKGQLGHEREGNKP--------EQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSD 113

Query: 299 FCLGHGEQHDELQ-PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 357
             LG     D +  PR IQ   ++ I  ++VS G+ H +AL + G  +TWGK   G LG 
Sbjct: 114 GQLGLMTTEDSVAVPRLIQKLNQQTI--LQVSCGNWHCLALAADGQFFTWGKNSHGQLGL 171

Query: 358 GDEI-DKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSD 416
           G E   +  P+ + SL+     QV A    +F L  +G+V+G+G    G LG  D    +
Sbjct: 172 GKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRE 231

Query: 417 KVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 476
               P  +  LR   V  IS G  HT V+T  G +F FG     QLGHD++   + P  +
Sbjct: 232 S---PCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRV 288

Query: 477 F 477
            
Sbjct: 289 L 289



 Score =  126 bits (316), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 98/309 (31%), Positives = 159/309 (51%), Gaps = 14/309 (4%)

Query: 159 FPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVP 217
           F S   V +V+   NH+ F+L+ G+V+TCG N+    GH R+ N+P      + AL    
Sbjct: 30  FISDRTVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGNKP----EQIGALADQH 85

Query: 218 CKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDR-PTPKSIAPLEEVGSVVQIAA 276
              V  G + +  L+ RG + + G+ + GQLG   T D    P+ I  L +  +++Q++ 
Sbjct: 86  IIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQ-QTILQVSC 144

Query: 277 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH-DELQPRAIQTFRRKGIHVVRVSAGDEHV 335
           G  + LA+  +G  +++G  S+  LG G++   +  P+ +++   +GI + +V+AG  H 
Sbjct: 145 GNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSL--EGIPLAQVAAGGAHS 202

Query: 336 VALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGS 395
            AL  SG V+ WG    G LG  DE D+  P  +  L++   V +   +  T VL  +G 
Sbjct: 203 FALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGG 262

Query: 396 VYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV-VTDRGRLFGF 454
           V+ FG    G LG     ++D+V  PR +  L    V+QI+ G  HT+  V   G ++ F
Sbjct: 263 VFTFGAGSCGQLG--HDSMNDEV-NPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAF 319

Query: 455 GDNERAQLG 463
           G   R QLG
Sbjct: 320 GCGARGQLG 328



 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 87/292 (29%), Positives = 140/292 (47%), Gaps = 8/292 (2%)

Query: 119 GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
           G +   L+ +  V++CG +  G LGH  E  +     +I   +  H++ V+  E+H+  +
Sbjct: 43  GNHSVFLLEDGEVYTCGLNTKGQLGHEREGNKP---EQIGALADQHIIHVACGESHSLAL 99

Query: 179 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVH 238
              GQ+F+ G  S    G   T   +  PRL++ L      QV+ G      L   G   
Sbjct: 100 SDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFF 159

Query: 239 TCGSNTHGQLGHGDTL-DRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 297
           T G N+HGQLG G     + +P+ +  LE +  + Q+AAG ++  A++ +G V+ +G  +
Sbjct: 160 TWGKNSHGQLGLGKEFPSQASPQRVRSLEGI-PLAQVAAGGAHSFALSLSGAVFGWGMNN 218

Query: 298 NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 357
              LG  ++ D   P  ++  R +   VV +S G+EH   L  SG V+T+G G CG LGH
Sbjct: 219 AGQLGLSDEKDRESPCHVKLLRTQ--KVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGH 276

Query: 358 GDEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLG 408
               D+  P  +  L      Q+ C R+     +  +G +Y FG    G LG
Sbjct: 277 DSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLG 328



 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 91/295 (30%), Positives = 136/295 (46%), Gaps = 22/295 (7%)

Query: 114 MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSAS 171
           + +  G  H+L +S+   +FS G+   G LG    T   V+  R I   +   ++QVS  
Sbjct: 87  IHVACGESHSLALSDRGQLFSWGAGSDGQLGLM-TTEDSVAVPRLIQKLNQQTILQVSCG 145

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
             H   +   GQ FT G NS    G          P+ V +L+G+P  QV AG   +  L
Sbjct: 146 NWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFAL 205

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
           ++ G V   G N  GQLG  D  DR +P  +  L     VV I+ G  +   +T +G V+
Sbjct: 206 SLSGAVFGWGMNNAGQLGLSDEKDRESPCHVK-LLRTQKVVYISCGEEHTAVLTKSGGVF 264

Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA-LDSSGYVYTWGKG 350
           +FG+GS   LGH   +DE+ PR +      G  V +++ G +H +A + SSG +Y +G G
Sbjct: 265 TFGAGSCGQLGHDSMNDEVNPRRV--LELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCG 322

Query: 351 YCGALGHGDEIDKTLPEPLS---------------SLKSHLAVQVCARKRKTFVL 390
             G LG G   +   P P+                  K H+  Q+ +   +TFVL
Sbjct: 323 ARGQLGTGHTCNVKCPSPVKGYWAAHSGQLTARADRFKYHIVKQIFSGGDQTFVL 377


>gi|356567509|ref|XP_003551961.1| PREDICTED: uncharacterized protein LOC100791947 [Glycine max]
          Length = 1106

 Score =  132 bits (333), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 103/316 (32%), Positives = 155/316 (49%), Gaps = 25/316 (7%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVPCKQVTA 223
           V  ++    HAA V + G+VF+ G+ S    GH  D++ P   P+L+E+L     + V  
Sbjct: 314 VQNIACGGKHAALVTKQGEVFSWGEESGGRLGHGVDSDVP--HPKLIESLSNTNIELVAC 371

Query: 224 GLNFTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSI-APLEEVGSVVQIAAGPSY 280
           G   T  +T+ G ++T G  T+  G LGHG+ +    PK +  PLE +  V  I+ GP +
Sbjct: 372 GEYHTCAVTLSGDLYTWGDGTYNYGLLGHGNQVSHWVPKRVNGPLEGI-HVSSISCGPWH 430

Query: 281 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL-- 338
              VT +G +++FG G+   LGHG++     PR I++   KG+  V+ + G  H  A+  
Sbjct: 431 TAVVTSSGQLFTFGDGTFGALGHGDRKSVSLPREIESL--KGLRTVQAACGVWHTAAVVE 488

Query: 339 ----------DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTF 388
                      SSG ++TWG G  G LGHGD+  K +P  + +L      QV      T 
Sbjct: 489 VMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKESKLVPTCVVTL-VEPNCQVACGHSMTV 547

Query: 389 VLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDR 448
            L  +G VY  G   +G LG      +D  L  R+   L    V +I+ G YH  V+T R
Sbjct: 548 ALSRSGHVYTMGSCVYGQLG---NTQADGKLPIRVEGKLSKSFVEEIACGAYHVAVLTSR 604

Query: 449 GRLFGFGDNERAQLGH 464
             +F +G     +LGH
Sbjct: 605 TEVFTWGKGANGRLGH 620



 Score =  112 bits (280), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 93/291 (31%), Positives = 134/291 (46%), Gaps = 23/291 (7%)

Query: 100 VEHSSDIVETSAGNMQITT-GRYHTLLISNSS---VFSCGSSLCGVLGHGPETTQCVSFT 155
           V H   I   S  N+++   G YHT  ++ S     +  G+   G+LGHG + +  V   
Sbjct: 352 VPHPKLIESLSNTNIELVACGEYHTCAVTLSGDLYTWGDGTYNYGLLGHGNQVSHWVP-K 410

Query: 156 RINFP-SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALK 214
           R+N P    HV  +S    H A V  SGQ+FT GD +    GH D  + +  PR +E+LK
Sbjct: 411 RVNGPLEGIHVSSISCGPWHTAVVTSSGQLFTFGDGTFGALGHGD-RKSVSLPREIESLK 469

Query: 215 GVPCKQVTAGLNFTGFLT------------IRGHVHTCGSNTHGQLGHGDTLDRPTPKSI 262
           G+   Q   G+  T  +               G + T G    G+LGHGD   +  P  +
Sbjct: 470 GLRTVQAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKESKLVPTCV 529

Query: 263 APLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKG 322
             L E     Q+A G S  +A++ +G VY+ GS     LG+ +   +L  R      +  
Sbjct: 530 VTLVEPN--CQVACGHSMTVALSRSGHVYTMGSCVYGQLGNTQADGKLPIRVEGKLSKS- 586

Query: 323 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
             V  ++ G  HV  L S   V+TWGKG  G LGHGD  D+  P  + +LK
Sbjct: 587 -FVEEIACGAYHVAVLTSRTEVFTWGKGANGRLGHGDTNDRNTPTLVEALK 636



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 83/279 (29%), Positives = 131/279 (46%), Gaps = 20/279 (7%)

Query: 207 PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 266
           P+ +E+   +  + +  G      +T +G V + G  + G+LGHG   D P PK I  L 
Sbjct: 303 PKALESAVVLDVQNIACGGKHAALVTKQGEVFSWGEESGGRLGHGVDSDVPHPKLIESLS 362

Query: 267 EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS-NF-CLGHGEQHDELQPRAIQTFRRKGIH 324
              ++  +A G  +  AVT +G +Y++G G+ N+  LGHG Q     P+ +     +GIH
Sbjct: 363 NT-NIELVACGEYHTCAVTLSGDLYTWGDGTYNYGLLGHGNQVSHWVPKRVNG-PLEGIH 420

Query: 325 VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARK 384
           V  +S G  H   + SSG ++T+G G  GALGHGD    +LP  + SLK    VQ     
Sbjct: 421 VSSISCGPWHTAVVTSSGQLFTFGDGTFGALGHGDRKSVSLPREIESLKGLRTVQAACGV 480

Query: 385 RKTFVLVDT------------GSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHV 432
             T  +V+             G ++ +G    G LG  D+   +  L P  + +L   + 
Sbjct: 481 WHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDK---ESKLVPTCVVTLVEPNC 537

Query: 433 SQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCL 471
            Q++ G   TV ++  G ++  G     QLG+    G L
Sbjct: 538 -QVACGHSMTVALSRSGHVYTMGSCVYGQLGNTQADGKL 575



 Score = 77.4 bits (189), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 62/183 (33%), Positives = 91/183 (49%), Gaps = 10/183 (5%)

Query: 296 GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGAL 355
           GSNF    G + D L P+A+++     + V  ++ G +H   +   G V++WG+   G L
Sbjct: 291 GSNF----GVKMDSLLPKALESAVV--LDVQNIACGGKHAALVTKQGEVFSWGEESGGRL 344

Query: 356 GHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVY--GFGWMGFGSLGFPDRG 413
           GHG + D   P+ + SL +     V   +  T  +  +G +Y  G G   +G LG  ++ 
Sbjct: 345 GHGVDSDVPHPKLIESLSNTNIELVACGEYHTCAVTLSGDLYTWGDGTYNYGLLGHGNQ- 403

Query: 414 VSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEP 473
           VS  V + R+   L   HVS IS G +HT VVT  G+LF FGD     LGH   +    P
Sbjct: 404 VSHWVPK-RVNGPLEGIHVSSISCGPWHTAVVTSSGQLFTFGDGTFGALGHGDRKSVSLP 462

Query: 474 TEI 476
            EI
Sbjct: 463 REI 465



 Score = 74.7 bits (182), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 67/225 (29%), Positives = 103/225 (45%), Gaps = 19/225 (8%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSASEN 173
           I+ G +HT ++++S  +F+ G    G LGHG    + VS  R I        VQ +    
Sbjct: 424 ISCGPWHTAVVTSSGQLFTFGDGTFGALGHGDR--KSVSLPREIESLKGLRTVQAACGVW 481

Query: 174 HAAFVLQ------------SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQV 221
           H A V++            SG++FT GD      GH D    +  P  V  L    C QV
Sbjct: 482 HTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKESKLV-PTCVVTLVEPNC-QV 539

Query: 222 TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 281
             G + T  L+  GHV+T GS  +GQLG+    D   P  +        V +IA G  ++
Sbjct: 540 ACGHSMTVALSRSGHVYTMGSCVYGQLGNTQA-DGKLPIRVEGKLSKSFVEEIACGAYHV 598

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVV 326
             +T    V+++G G+N  LGHG+ +D   P  ++  + K +  +
Sbjct: 599 AVLTSRTEVFTWGKGANGRLGHGDTNDRNTPTLVEALKDKQVKSI 643



 Score = 52.0 bits (123), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 52/193 (26%), Positives = 88/193 (45%), Gaps = 9/193 (4%)

Query: 94  LRFLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVS 153
           L+ L++V+ +  +  T+A  +++  G   +   S+  +F+ G    G LGHG + ++ V 
Sbjct: 468 LKGLRTVQAACGVWHTAA-VVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKESKLVP 526

Query: 154 FTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHR--DTNRPIFRPRLVE 211
              +         QV+   +    + +SG V+T G       G+   D   PI   R+  
Sbjct: 527 TCVVTL--VEPNCQVACGHSMTVALSRSGHVYTMGSCVYGQLGNTQADGKLPI---RVEG 581

Query: 212 ALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSV 271
            L     +++  G      LT R  V T G   +G+LGHGDT DR TP  +  L++   V
Sbjct: 582 KLSKSFVEEIACGAYHVAVLTSRTEVFTWGKGANGRLGHGDTNDRNTPTLVEALKD-KQV 640

Query: 272 VQIAAGPSYMLAV 284
             IA G ++  A+
Sbjct: 641 KSIACGTNFTAAI 653



 Score = 45.8 bits (107), Expect = 0.046,   Method: Compositional matrix adjust.
 Identities = 41/129 (31%), Positives = 59/129 (45%), Gaps = 9/129 (6%)

Query: 113 NMQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFP---SAAHVVQV 168
           N Q+  G   T+ +S S  V++ GS + G LG+    TQ      I      S + V ++
Sbjct: 536 NCQVACGHSMTVALSRSGHVYTMGSCVYGQLGN----TQADGKLPIRVEGKLSKSFVEEI 591

Query: 169 SASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFT 228
           +    H A +    +VFT G  ++   GH DTN     P LVEALK    K +  G NFT
Sbjct: 592 ACGAYHVAVLTSRTEVFTWGKGANGRLGHGDTN-DRNTPTLVEALKDKQVKSIACGTNFT 650

Query: 229 GFLTIRGHV 237
             + +   V
Sbjct: 651 AAICLHKWV 659


>gi|194206384|ref|XP_001917973.1| PREDICTED: LOW QUALITY PROTEIN: e3 ubiquitin-protein ligase HERC2
            [Equus caballus]
          Length = 4840

 Score =  132 bits (333), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 110/387 (28%), Positives = 180/387 (46%), Gaps = 21/387 (5%)

Query: 102  HSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPS 161
            +S  ++   A  + I  G +    +   +V S GS  C   G G    +  SF+     S
Sbjct: 2940 NSGSLIRKKAAGLGIQRGPWTPFGVGQGAV-STGSLCCD--GVGLSQIKVPSFSETL--S 2994

Query: 162  AAHVVQVSASENHAAFVLQSGQVFTCGD--NSSFCCGHRDTNRPIFRPRLVEALKGVPCK 219
            A +VVQV+        V   G+V+ CG+  N     G      PI  PR V AL     K
Sbjct: 2995 ALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPI--PRQVTALSSYVVK 3052

Query: 220  QVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAG 277
            +V   +G      LT+ G V + G    G+LGH   ++   P+ I  L+    +  IA G
Sbjct: 3053 KVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALK-TKRIRDIACG 3111

Query: 278  PSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEHV 335
             S+  A+T +G +Y++G G    LGHG+   +L+P+ ++     G  V++V+ G  D   
Sbjct: 3112 SSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLL--GHRVIQVACGSRDAQT 3169

Query: 336  VALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGS 395
            +AL   G V++WG G  G LG G      +P+ +  L      Q+    + +  L  +G 
Sbjct: 3170 LALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGV 3229

Query: 396  VYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFG 455
            V+ +G   +  LG    G    V +P++++ LR   +  ++ G  H + VTD G+++ +G
Sbjct: 3230 VWTWGKGDYFRLG---HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWG 3286

Query: 456  DNERAQLGHDTLRGCLEPTEIFIQEME 482
            DN+  Q G+ T     +PT   +Q +E
Sbjct: 3287 DNDHGQQGNGTTTVNRKPT--LVQGLE 3311



 Score =  121 bits (304), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 85/280 (30%), Positives = 139/280 (49%), Gaps = 9/280 (3%)

Query: 166  VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 225
            V V++   H   +   G+V++ G+      GH + + P  RPR++E+L+G+    V AG 
Sbjct: 4048 VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRS-PCDRPRVIESLRGIELVDVAAGG 4106

Query: 226  NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA--AGPSYMLA 283
              +  +T  G ++T G   +G+LGH D+ D+  PK +  L+    VV +A  +G +  L 
Sbjct: 4107 AHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQG-HRVVDVACGSGDAQTLC 4165

Query: 284  VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 343
            +T +  V+S+G G    LG G       P  I +    G+ VV+V  G +  VAL  SG 
Sbjct: 4166 LTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL--TGLGVVKVECGSQFSVALTKSGA 4223

Query: 344  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 403
            VYTWGKG    LGHG +     P  +  L+    + +           + G VY +G   
Sbjct: 4224 VYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDND 4283

Query: 404  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV 443
             G LG    G ++ + RPR++ +L+   V++++ G  HT+
Sbjct: 4284 EGQLG---DGTTNAIQRPRLVPALQGKKVNRVACGSAHTL 4320



 Score =  120 bits (301), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 82/269 (30%), Positives = 131/269 (48%), Gaps = 6/269 (2%)

Query: 207  PRLVEALKGVPCKQV--TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP 264
            P L+E+++ V  K+V   +G      L+  G V++ G    G+LGHG+      P+ I  
Sbjct: 4034 PTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIES 4093

Query: 265  LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH 324
            L  +  +V +AAG ++   VT  G +Y++G G    LGH +  D+L+P+ ++  +   + 
Sbjct: 4094 LRGI-ELVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVV 4152

Query: 325  VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARK 384
             V   +GD   + L     V++WG G  G LG G      +P  + SL     V+V    
Sbjct: 4153 DVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGS 4212

Query: 385  RKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV 444
            + +  L  +G+VY +G   +  LG    G  D V RPR +  L+   V  I+TG  H V 
Sbjct: 4213 QFSVALTKSGAVYTWGKGDYHRLG---HGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 4269

Query: 445  VTDRGRLFGFGDNERAQLGHDTLRGCLEP 473
             T+ G ++ +GDN+  QLG  T      P
Sbjct: 4270 CTEDGEVYTWGDNDEGQLGDGTTNAIQRP 4298



 Score =  117 bits (294), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 92/311 (29%), Positives = 151/311 (48%), Gaps = 24/311 (7%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V Q++ +E     + ++G+V+T   NS       DT      P+LV+ L      ++ A 
Sbjct: 454 VTQIACAEKRFLILSRNGRVYTQAYNS-------DT----LAPQLVQGLASRNIVKIAAH 502

Query: 225 LNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGS-VVQIAAGPS 279
            +   +L +   G V++ G    G+LGHGDT+    PK I+    ++ G  VV IA G +
Sbjct: 503 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGST 562

Query: 280 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS--AGDEHVVA 337
           Y  A+T  G +Y++G G+   LGHG   DE  P  +     KG+ V+ V+  +GD   +A
Sbjct: 563 YSAAITAEGELYTWGRGNYGRLGHGSSEDEAVPMLVAGL--KGLKVIDVACGSGDAQTLA 620

Query: 338 LDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVY 397
           +  +G V++WG G  G LG G       P+ +  L+    V+V    + +  L   G VY
Sbjct: 621 VTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVY 680

Query: 398 GFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDN 457
            +G      LG    G  + V  P++L+ L+   V  ++ G  H + +T+   +  +G N
Sbjct: 681 SWGKGDNQRLG---HGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSN 737

Query: 458 ERAQLGHDTLR 468
           ++ Q   DTLR
Sbjct: 738 DQCQ-HFDTLR 747



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 84/265 (31%), Positives = 126/265 (47%), Gaps = 12/265 (4%)

Query: 96   FLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFT 155
             L+S++H    ++  A N   + G++   L S   V+S G +  G LGHG   + C    
Sbjct: 4036 LLESIQHV--FIKKVAVN---SGGKHCLALSSEGEVYSWGEAEDGKLGHG-NRSPCDRPR 4089

Query: 156  RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 215
             I       +V V+A   H+A V  +G ++T G       GH D+   + +P+LVEAL+G
Sbjct: 4090 VIESLRGIELVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQL-KPKLVEALQG 4148

Query: 216  VPCKQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
                 V   +G   T  LT    V + G   +G+LG G +     P  I  L  +G VV+
Sbjct: 4149 HRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLG-VVK 4207

Query: 274  IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
            +  G  + +A+T +G VY++G G    LGHG      +PR +Q    +G  V+ ++ G  
Sbjct: 4208 VECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGL--QGKKVIAIATGSL 4265

Query: 334  HVVALDSSGYVYTWGKGYCGALGHG 358
            H V     G VYTWG    G LG G
Sbjct: 4266 HCVCCTEDGEVYTWGDNDEGQLGDG 4290



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 76/247 (30%), Positives = 125/247 (50%), Gaps = 12/247 (4%)

Query: 235  GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
            G ++  G N  GQLG   G  +  PTP +++A L  V    Q+  G   + AVT +G +Y
Sbjct: 3958 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPV----QLIGGEQTLFAVTADGKLY 4013

Query: 292  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 351
            + G G+   LG G       P  +++ +   I  V V++G +H +AL S G VY+WG+  
Sbjct: 4014 ATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAE 4073

Query: 352  CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 411
             G LGHG+      P  + SL+    V V A    +  +   G +Y +G   +G LG  D
Sbjct: 4074 DGKLGHGNRSPCDRPRVIESLRGIELVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD 4133

Query: 412  RGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG 469
               S+  L+P+++++L+ H V  ++  +G   T+ +TD   ++ +GD +  +LG     G
Sbjct: 4134 ---SEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDG 4190

Query: 470  CLEPTEI 476
            C  P +I
Sbjct: 4191 CKVPMKI 4197



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 88/328 (26%), Positives = 149/328 (45%), Gaps = 26/328 (7%)

Query: 50  PQKFRSLVDLAASQLCALHSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVET 109
           P +   L +L  +Q+      +  +SRN ++    +   +     + +Q +  S +IV+ 
Sbjct: 443 PIQCEGLANLGVTQIACAEKRFLILSRNGRV--YTQAYNSDTLAPQLVQGLA-SRNIVKI 499

Query: 110 SAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSA 162
           +A     + G ++  L +   V+S G    G LGHG       P+     S  +    + 
Sbjct: 500 AAH----SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQ----AG 551

Query: 163 AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 222
            HVV ++    ++A +   G+++T G  +    GH  +      P LV  LKG+    V 
Sbjct: 552 KHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAV-PMLVAGLKGLKVIDVA 610

Query: 223 AGLNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 280
            G      L +   G V + G   +G+LG G +    TPK I  L+++  VV++  G  +
Sbjct: 611 CGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL-DVVKVRCGSQF 669

Query: 281 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 340
            +A+T +G VYS+G G N  LGHG +     P+ ++    +G  V+ V+AG  H +AL  
Sbjct: 670 SIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGL--QGKKVIDVAAGSTHCLALTE 727

Query: 341 SGYVYTWGKGYCGALGHGDEIDKTLPEP 368
              V++WG        H D +  T PEP
Sbjct: 728 DSEVHSWGSN--DQCQHFDTLRVTKPEP 753



 Score = 76.6 bits (187), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 58/219 (26%), Positives = 100/219 (45%), Gaps = 21/219 (9%)

Query: 271 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 330
           V QIA      L ++ NG VY+    S          D L P+ +Q    + I  +   +
Sbjct: 454 VTQIACAEKRFLILSRNGRVYTQAYNS----------DTLAPQLVQGLASRNIVKIAAHS 503

Query: 331 GDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLA----VQVCARKRK 386
              H +AL ++G VY+WG G  G LGHGD +    P+ +S+     A    V +      
Sbjct: 504 DGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTY 563

Query: 387 TFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVV 444
           +  +   G +Y +G   +G LG    G S+    P ++  L+   V  ++  +G   T+ 
Sbjct: 564 SAAITAEGELYTWGRGNYGRLG---HGSSEDEAVPMLVAGLKGLKVIDVACGSGDAQTLA 620

Query: 445 VTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQEMEE 483
           VT+ G+++ +GD +  +LG     GC  P    I+++++
Sbjct: 621 VTENGQVWSWGDGDYGKLGRGGSDGCKTPK--LIEKLQD 657



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 52/169 (30%), Positives = 76/169 (44%), Gaps = 8/169 (4%)

Query: 118 TGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
           +G   TL ++ N  V+S G    G LG G  +  C +   I       VV+V      + 
Sbjct: 613 SGDAQTLAVTENGQVWSWGDGDYGKLGRG-GSDGCKTPKLIEKLQDLDVVKVRCGSQFSI 671

Query: 177 FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
            + + GQV++ G   +   GH  T   +  P+L+E L+G     V AG      LT    
Sbjct: 672 ALTKDGQVYSWGKGDNQRLGH-GTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSE 730

Query: 237 VHTCGSNTHGQLGHGDTL--DRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
           VH+ GSN   Q  H DTL   +P P ++  L +   +V IA GP+   A
Sbjct: 731 VHSWGSNDQCQ--HFDTLRVTKPEPSALPGL-DTKHIVGIACGPAQSFA 776



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 50/169 (29%), Positives = 76/169 (44%), Gaps = 8/169 (4%)

Query: 118  TGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
            +G   TL L  + +V+S G    G LG G  +  C    +I+  +   VV+V      + 
Sbjct: 4158 SGDAQTLCLTDDDTVWSWGDGDYGKLGRG-GSDGCKVPMKIDSLTGLGVVKVECGSQFSV 4216

Query: 177  FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
             + +SG V+T G       GH   +  + RPR V+ L+G     +  G       T  G 
Sbjct: 4217 ALTKSGAVYTWGKGDYHRLGHGSDDH-VRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGE 4275

Query: 237  VHTCGSNTHGQLGHGDT--LDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
            V+T G N  GQLG G T  + RP    + P  +   V ++A G ++ LA
Sbjct: 4276 VYTWGDNDEGQLGDGTTNAIQRP---RLVPALQGKKVNRVACGSAHTLA 4321



 Score = 52.0 bits (123), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 36/147 (24%), Positives = 71/147 (48%), Gaps = 5/147 (3%)

Query: 332  DEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 391
            D+  ++   SG +Y WG  + G LG  +     +P P  +L +   VQ+   ++  F + 
Sbjct: 3948 DDWTLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVT 4007

Query: 392  DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRG 449
              G +Y     G+G+ G    G ++ V  P +L+S++   + +++  +G  H + ++  G
Sbjct: 4008 ADGKLYA---TGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 4064

Query: 450  RLFGFGDNERAQLGHDTLRGCLEPTEI 476
             ++ +G+ E  +LGH     C  P  I
Sbjct: 4065 EVYSWGEAEDGKLGHGNRSPCDRPRVI 4091


>gi|345795744|ref|XP_535653.3| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 [Canis lupus
           familiaris]
          Length = 1050

 Score =  132 bits (333), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 97/301 (32%), Positives = 147/301 (48%), Gaps = 29/301 (9%)

Query: 193 FCCGHRDTNRP---------IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 243
            C G+    +P         +  P++   +     K+V  G N + FL   G V+TCG N
Sbjct: 2   LCWGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLN 61

Query: 244 THGQLGHGDTLDRPTPKSIAPLEEVGS-----VVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
           T GQLGH    ++P        E++G+     +V +A G S+ LA++  G ++S+G+GS+
Sbjct: 62  TKGQLGHEREGNKP--------EQIGALADQHIVHVACGESHSLALSDRGQLFSWGAGSD 113

Query: 299 FCLGHGEQHDELQ-PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 357
             LG     D +  PR IQ   ++ I  ++VS G+ H +AL + G  +TWGK   G LG 
Sbjct: 114 GQLGLMTTEDSVAVPRLIQKLNQQTI--LQVSCGNWHCLALAADGQFFTWGKNSHGQLGL 171

Query: 358 GDEI-DKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSD 416
           G E   +  P+ + SL+     QV A    +F L  +G+V+G+G    G LG  D    +
Sbjct: 172 GKEYPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEEDRE 231

Query: 417 KVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 476
               P  +  LR   V  IS G  HT V+T  G +F FG     QLGHD++   + P  +
Sbjct: 232 S---PCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRV 288

Query: 477 F 477
            
Sbjct: 289 L 289



 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 97/309 (31%), Positives = 160/309 (51%), Gaps = 14/309 (4%)

Query: 159 FPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVP 217
           F S   V +V+   NH+ F+L+ G+V+TCG N+    GH R+ N+P      + AL    
Sbjct: 30  FISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGNKP----EQIGALADQH 85

Query: 218 CKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDR-PTPKSIAPLEEVGSVVQIAA 276
              V  G + +  L+ RG + + G+ + GQLG   T D    P+ I  L +  +++Q++ 
Sbjct: 86  IVHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQ-QTILQVSC 144

Query: 277 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH-DELQPRAIQTFRRKGIHVVRVSAGDEHV 335
           G  + LA+  +G  +++G  S+  LG G+++  +  P+ +++   +GI + +V+AG  H 
Sbjct: 145 GNWHCLALAADGQFFTWGKNSHGQLGLGKEYPSQASPQRVRSL--EGIPLAQVAAGGAHS 202

Query: 336 VALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGS 395
            AL  SG V+ WG    G LG  DE D+  P  +  L++   V +   +  T VL  +G 
Sbjct: 203 FALSLSGAVFGWGMNNAGQLGLSDEEDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGG 262

Query: 396 VYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV-VTDRGRLFGF 454
           V+ FG    G LG     ++D+V  PR +  L    V+QI+ G  HT+  V   G ++ F
Sbjct: 263 VFTFGAGSCGQLG--HDSMNDEV-NPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAF 319

Query: 455 GDNERAQLG 463
           G   + QLG
Sbjct: 320 GCGAKGQLG 328



 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 95/320 (29%), Positives = 150/320 (46%), Gaps = 11/320 (3%)

Query: 119 GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
           G +   L+ +  V++CG +  G LGH  E  +     +I   +  H+V V+  E+H+  +
Sbjct: 43  GNHSVFLLEDGEVYTCGLNTKGQLGHEREGNKP---EQIGALADQHIVHVACGESHSLAL 99

Query: 179 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVH 238
              GQ+F+ G  S    G   T   +  PRL++ L      QV+ G      L   G   
Sbjct: 100 SDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFF 159

Query: 239 TCGSNTHGQLGHGDTL-DRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 297
           T G N+HGQLG G     + +P+ +  LE +  + Q+AAG ++  A++ +G V+ +G  +
Sbjct: 160 TWGKNSHGQLGLGKEYPSQASPQRVRSLEGI-PLAQVAAGGAHSFALSLSGAVFGWGMNN 218

Query: 298 NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 357
              LG  ++ D   P  ++  R +   VV +S G+EH   L  SG V+T+G G CG LGH
Sbjct: 219 AGQLGLSDEEDRESPCHVKLLRTQ--KVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGH 276

Query: 358 GDEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSD 416
               D+  P  +  L      Q+ C R+     +  +G +Y FG    G LG    G + 
Sbjct: 277 DSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGAKGQLG---TGHTC 333

Query: 417 KVLRPRILDSLRAHHVSQIS 436
            V  P  +    A H  Q+S
Sbjct: 334 NVKCPSPVKGYWAAHSGQLS 353



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 91/295 (30%), Positives = 136/295 (46%), Gaps = 22/295 (7%)

Query: 114 MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSAS 171
           + +  G  H+L +S+   +FS G+   G LG    T   V+  R I   +   ++QVS  
Sbjct: 87  VHVACGESHSLALSDRGQLFSWGAGSDGQLGLM-TTEDSVAVPRLIQKLNQQTILQVSCG 145

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
             H   +   GQ FT G NS    G          P+ V +L+G+P  QV AG   +  L
Sbjct: 146 NWHCLALAADGQFFTWGKNSHGQLGLGKEYPSQASPQRVRSLEGIPLAQVAAGGAHSFAL 205

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
           ++ G V   G N  GQLG  D  DR +P  +  L     VV I+ G  +   +T +G V+
Sbjct: 206 SLSGAVFGWGMNNAGQLGLSDEEDRESPCHVKLLR-TQKVVYISCGEEHTAVLTKSGGVF 264

Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA-LDSSGYVYTWGKG 350
           +FG+GS   LGH   +DE+ PR +      G  V +++ G +H +A + SSG +Y +G G
Sbjct: 265 TFGAGSCGQLGHDSMNDEVNPRRV--LELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCG 322

Query: 351 YCGALGHGDEIDKTLPEPLS---------------SLKSHLAVQVCARKRKTFVL 390
             G LG G   +   P P+                  K H+  Q+ +   +TFVL
Sbjct: 323 AKGQLGTGHTCNVKCPSPVKGYWAAHSGQLSARADRFKYHIVKQIFSGGDQTFVL 377


>gi|354500120|ref|XP_003512150.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3-like, partial
           [Cricetulus griseus]
          Length = 631

 Score =  132 bits (333), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 99/312 (31%), Positives = 151/312 (48%), Gaps = 29/312 (9%)

Query: 193 FCCGHRDTNRP---------IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 243
            C G+    +P         +  P++   +     K+V  G N + FL   G V+TCG N
Sbjct: 2   LCWGYWSLGQPGISSNLRGIVAEPQVCRFVSDRSIKEVACGGNHSVFLLEDGEVYTCGVN 61

Query: 244 THGQLGHGDTLDRPTPKSIAPLEEVGS-----VVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
           + GQLGH    ++P        E++G+     +V +A G S+ LA++  G ++S+G+GS+
Sbjct: 62  SKGQLGHEREGNKP--------EQIGALADQHIVHVACGESHSLALSDRGQLFSWGAGSD 113

Query: 299 FCLGHGEQHDELQ-PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 357
             LG     D +  PR IQ   ++ I  ++VS G+ H +AL + G  +TWGK   G LG 
Sbjct: 114 GQLGLMTTEDSVAVPRLIQKLNQQTI--LQVSCGNWHCLALAADGQFFTWGKNSHGQLGL 171

Query: 358 GDEI-DKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSD 416
           G E   +T P+ + SL+     QV A    +F L  +G+V+G+G    G LG  D    +
Sbjct: 172 GKEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRE 231

Query: 417 KVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 476
               P  +  LR   V  IS G  HT V+T  G +F FG     QLGH ++   + P  +
Sbjct: 232 S---PCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHGSMNDEVNPRRV 288

Query: 477 FIQEMEEDTGLA 488
                 E T +A
Sbjct: 289 LELMGSEVTQIA 300



 Score =  129 bits (324), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 100/323 (30%), Positives = 161/323 (49%), Gaps = 16/323 (4%)

Query: 159 FPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVP 217
           F S   + +V+   NH+ F+L+ G+V+TCG NS    GH R+ N    +P  + AL    
Sbjct: 30  FVSDRSIKEVACGGNHSVFLLEDGEVYTCGVNSKGQLGHEREGN----KPEQIGALADQH 85

Query: 218 CKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDR-PTPKSIAPLEEVGSVVQIAA 276
              V  G + +  L+ RG + + G+ + GQLG   T D    P+ I  L +  +++Q++ 
Sbjct: 86  IVHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQ-QTILQVSC 144

Query: 277 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH-DELQPRAIQTFRRKGIHVVRVSAGDEHV 335
           G  + LA+  +G  +++G  S+  LG G++   +  P+ +++   +GI + +V+AG  H 
Sbjct: 145 GNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQTSPQRVRSL--EGIPLAQVAAGGAHS 202

Query: 336 VALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGS 395
            AL  SG V+ WG    G LG  DE D+  P  +  L++   V +   +  T VL  +G 
Sbjct: 203 FALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGG 262

Query: 396 VYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV-VTDRGRLFGF 454
           V+ FG    G LG    G  +  + PR +  L    V+QI+ G  HT+  V   G ++ F
Sbjct: 263 VFTFGAGSCGQLG---HGSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAF 319

Query: 455 GDNERAQL--GHDTLRGCLEPTE 475
           G   R QL  GH     C  P +
Sbjct: 320 GCGARGQLGTGHTCNVKCPSPVK 342



 Score =  127 bits (320), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 97/320 (30%), Positives = 150/320 (46%), Gaps = 11/320 (3%)

Query: 119 GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
           G +   L+ +  V++CG +  G LGH  E  +     +I   +  H+V V+  E+H+  +
Sbjct: 43  GNHSVFLLEDGEVYTCGVNSKGQLGHEREGNKP---EQIGALADQHIVHVACGESHSLAL 99

Query: 179 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVH 238
              GQ+F+ G  S    G   T   +  PRL++ L      QV+ G      L   G   
Sbjct: 100 SDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFF 159

Query: 239 TCGSNTHGQLGHGDTLDRPT-PKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 297
           T G N+HGQLG G      T P+ +  LE +  + Q+AAG ++  A++ +G V+ +G  +
Sbjct: 160 TWGKNSHGQLGLGKEFPSQTSPQRVRSLEGI-PLAQVAAGGAHSFALSLSGAVFGWGMNN 218

Query: 298 NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 357
              LG  ++ D   P  ++  R +   VV +S G+EH   L  SG V+T+G G CG LGH
Sbjct: 219 AGQLGLSDEKDRESPCHVKLLRTQ--KVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGH 276

Query: 358 GDEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSD 416
           G   D+  P  +  L      Q+ C R+     +  +G +Y FG    G LG    G + 
Sbjct: 277 GSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLG---TGHTC 333

Query: 417 KVLRPRILDSLRAHHVSQIS 436
            V  P  +    A H  Q+S
Sbjct: 334 NVKCPSPVKGYWAAHSGQLS 353



 Score =  109 bits (272), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 88/276 (31%), Positives = 133/276 (48%), Gaps = 7/276 (2%)

Query: 114 MQITTGRYHTLLISN-SSVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSAS 171
           + +  G  H+L +S+   +FS G+   G LG    T   V+  R I   +   ++QVS  
Sbjct: 87  VHVACGESHSLALSDRGQLFSWGAGSDGQLGL-MTTEDSVAVPRLIQKLNQQTILQVSCG 145

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
             H   +   GQ FT G NS    G          P+ V +L+G+P  QV AG   +  L
Sbjct: 146 NWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFAL 205

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
           ++ G V   G N  GQLG  D  DR +P  +  L     VV I+ G  +   +T +G V+
Sbjct: 206 SLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLR-TQKVVYISCGEEHTAVLTKSGGVF 264

Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA-LDSSGYVYTWGKG 350
           +FG+GS   LGHG  +DE+ PR +      G  V +++ G +H +A + SSG +Y +G G
Sbjct: 265 TFGAGSCGQLGHGSMNDEVNPRRV--LELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCG 322

Query: 351 YCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRK 386
             G LG G   +   P P+    +  + Q+ AR  +
Sbjct: 323 ARGQLGTGHTCNVKCPSPVKGYWAAHSGQLSARADR 358


>gi|2829910|gb|AAC00618.1| Unknown protein, contains regulator of chromosome condensation
           motifs [Arabidopsis thaliana]
          Length = 1108

 Score =  132 bits (333), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 101/325 (31%), Positives = 152/325 (46%), Gaps = 21/325 (6%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V Q++    HAAFV + G++FT G+ S    GH    + +F PRLVE+L         A 
Sbjct: 288 VHQIACGVRHAAFVTRQGEIFTWGEESGGRLGH-GIGKDVFHPRLVESLTATSSVDFVAC 346

Query: 225 LNF-TGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 281
             F T  +T+ G ++T G  TH  G LGHG  +    PK IA   E   V  ++ GP + 
Sbjct: 347 GEFHTCAVTLAGELYTWGDGTHNVGLLGHGSDISHWIPKRIAGSLEGLHVASVSCGPWHT 406

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL--- 338
             +T  G +++FG G+   LGHG++     PR +++    G+  + VS G  H  A+   
Sbjct: 407 ALITSYGRLFTFGDGTFGVLGHGDKETVQYPREVESL--SGLRTIAVSCGVWHTAAVVEI 464

Query: 339 ---------DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFV 389
                     SSG ++TWG G    LGHGD+  +  P  + +L  +   ++      T  
Sbjct: 465 IVTQSNSSSVSSGKLFTWGDGDKNRLGHGDKDPRLKPTCVPALIDYNFHKIACGHSLTVG 524

Query: 390 LVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRG 449
           L  +G V+  G   +G LG      +D  L   + D L +  V +IS G YH   +T R 
Sbjct: 525 LTTSGQVFTMGSTVYGQLG---NLQTDGKLPCLVEDKLASEFVEEISCGAYHVAALTSRN 581

Query: 450 RLFGFGDNERAQLGHDTLRGCLEPT 474
            ++ +G     +LGH  L     PT
Sbjct: 582 EVYTWGKGANGRLGHGDLEDRKVPT 606



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 83/282 (29%), Positives = 127/282 (45%), Gaps = 20/282 (7%)

Query: 116 ITTGRYHTLLISNSS---VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +  G +HT  ++ +     +  G+   G+LGHG + +  +           HV  VS   
Sbjct: 344 VACGEFHTCAVTLAGELYTWGDGTHNVGLLGHGSDISHWIPKRIAGSLEGLHVASVSCGP 403

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            H A +   G++FT GD +    GH D    +  PR VE+L G+    V+ G+  T  + 
Sbjct: 404 WHTALITSYGRLFTFGDGTFGVLGHGD-KETVQYPREVESLSGLRTIAVSCGVWHTAAVV 462

Query: 233 ------------IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 280
                         G + T G     +LGHGD   R  P  +  L +  +  +IA G S 
Sbjct: 463 EIIVTQSNSSSVSSGKLFTWGDGDKNRLGHGDKDPRLKPTCVPALIDY-NFHKIACGHSL 521

Query: 281 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 340
            + +T +G V++ GS     LG+ +   +L P  ++  +     V  +S G  HV AL S
Sbjct: 522 TVGLTTSGQVFTMGSTVYGQLGNLQTDGKL-PCLVED-KLASEFVEEISCGAYHVAALTS 579

Query: 341 SGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKS-HLAVQVC 381
              VYTWGKG  G LGHGD  D+ +P  + +LK  H+    C
Sbjct: 580 RNEVYTWGKGANGRLGHGDLEDRKVPTIVEALKDRHVKYIAC 621



 Score = 95.1 bits (235), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 84/301 (27%), Positives = 137/301 (45%), Gaps = 21/301 (6%)

Query: 200 TNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTP 259
           T   +  P+ +E+   +   Q+  G+    F+T +G + T G  + G+LGHG   D   P
Sbjct: 270 TRTDVLVPKPLESNIVLDVHQIACGVRHAAFVTRQGEIFTWGEESGGRLGHGIGKDVFHP 329

Query: 260 KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC--LGHGEQHDELQPRAIQT 317
           + +  L    SV  +A G  +  AVT  G +Y++G G++    LGHG       P+ I  
Sbjct: 330 RLVESLTATSSVDFVACGEFHTCAVTLAGELYTWGDGTHNVGLLGHGSDISHWIPKRIAG 389

Query: 318 FRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLA 377
              +G+HV  VS G  H   + S G ++T+G G  G LGHGD+     P  + SL     
Sbjct: 390 -SLEGLHVASVSCGPWHTALITSYGRLFTFGDGTFGVLGHGDKETVQYPREVESLSGLRT 448

Query: 378 VQVCARKRKTFVLVD------------TGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILD 425
           + V      T  +V+            +G ++ +G      LG  D+   D  L+P  + 
Sbjct: 449 IAVSCGVWHTAAVVEIIVTQSNSSSVSSGKLFTWGDGDKNRLGHGDK---DPRLKPTCVP 505

Query: 426 SLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG---CLEPTEIFIQEME 482
           +L  ++  +I+ G   TV +T  G++F  G     QLG+    G   CL   ++  + +E
Sbjct: 506 ALIDYNFHKIACGHSLTVGLTTSGQVFTMGSTVYGQLGNLQTDGKLPCLVEDKLASEFVE 565

Query: 483 E 483
           E
Sbjct: 566 E 566


>gi|18087541|gb|AAL58903.1|AF462811_1 At1g76950/F22K20_5 [Arabidopsis thaliana]
 gi|27363446|gb|AAO11642.1| At1g76950/F22K20_5 [Arabidopsis thaliana]
          Length = 1103

 Score =  132 bits (333), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 101/325 (31%), Positives = 152/325 (46%), Gaps = 21/325 (6%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V Q++    HAAFV + G++FT G+ S    GH    + +F PRLVE+L         A 
Sbjct: 283 VHQIACGVRHAAFVTRQGEIFTWGEESGGRLGH-GIGKDVFHPRLVESLTATSSVDFVAC 341

Query: 225 LNF-TGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 281
             F T  +T+ G ++T G  TH  G LGHG  +    PK IA   E   V  ++ GP + 
Sbjct: 342 GEFHTCAVTLAGELYTWGDGTHNVGLLGHGSDISHWIPKRIAGSLEGLHVASVSCGPWHT 401

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL--- 338
             +T  G +++FG G+   LGHG++     PR +++    G+  + VS G  H  A+   
Sbjct: 402 ALITSYGRLFTFGDGTFGVLGHGDKETVQYPREVESL--SGLRTIAVSCGVWHTAAVVEI 459

Query: 339 ---------DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFV 389
                     SSG ++TWG G    LGHGD+  +  P  + +L  +   ++      T  
Sbjct: 460 IVTQSNSSSVSSGKLFTWGDGDKNRLGHGDKDPRLKPTCVPALIDYNFHKIACGHSLTVG 519

Query: 390 LVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRG 449
           L  +G V+  G   +G LG      +D  L   + D L +  V +IS G YH   +T R 
Sbjct: 520 LTTSGQVFTMGSTVYGQLGNLQ---TDGKLPCLVEDKLASEFVEEISCGAYHVAALTSRN 576

Query: 450 RLFGFGDNERAQLGHDTLRGCLEPT 474
            ++ +G     +LGH  L     PT
Sbjct: 577 EVYTWGKGANGRLGHGDLEDRKVPT 601



 Score = 96.3 bits (238), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 83/282 (29%), Positives = 127/282 (45%), Gaps = 20/282 (7%)

Query: 116 ITTGRYHTLLISNSS---VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +  G +HT  ++ +     +  G+   G+LGHG + +  +           HV  VS   
Sbjct: 339 VACGEFHTCAVTLAGELYTWGDGTHNVGLLGHGSDISHWIPKRIAGSLEGLHVASVSCGP 398

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            H A +   G++FT GD +    GH D    +  PR VE+L G+    V+ G+  T  + 
Sbjct: 399 WHTALITSYGRLFTFGDGTFGVLGHGD-KETVQYPREVESLSGLRTIAVSCGVWHTAAVV 457

Query: 233 ------------IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 280
                         G + T G     +LGHGD   R  P  +  L +  +  +IA G S 
Sbjct: 458 EIIVTQSNSSSVSSGKLFTWGDGDKNRLGHGDKDPRLKPTCVPALIDY-NFHKIACGHSL 516

Query: 281 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 340
            + +T +G V++ GS     LG+ +   +L P  ++  +     V  +S G  HV AL S
Sbjct: 517 TVGLTTSGQVFTMGSTVYGQLGNLQTDGKL-PCLVED-KLASEFVEEISCGAYHVAALTS 574

Query: 341 SGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKS-HLAVQVC 381
              VYTWGKG  G LGHGD  D+ +P  + +LK  H+    C
Sbjct: 575 RNEVYTWGKGANGRLGHGDLEDRKVPTIVEALKDRHVKYIAC 616



 Score = 95.1 bits (235), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 84/301 (27%), Positives = 137/301 (45%), Gaps = 21/301 (6%)

Query: 200 TNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTP 259
           T   +  P+ +E+   +   Q+  G+    F+T +G + T G  + G+LGHG   D   P
Sbjct: 265 TRTDVLVPKPLESNIVLDVHQIACGVRHAAFVTRQGEIFTWGEESGGRLGHGIGKDVFHP 324

Query: 260 KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC--LGHGEQHDELQPRAIQT 317
           + +  L    SV  +A G  +  AVT  G +Y++G G++    LGHG       P+ I  
Sbjct: 325 RLVESLTATSSVDFVACGEFHTCAVTLAGELYTWGDGTHNVGLLGHGSDISHWIPKRI-A 383

Query: 318 FRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLA 377
              +G+HV  VS G  H   + S G ++T+G G  G LGHGD+     P  + SL     
Sbjct: 384 GSLEGLHVASVSCGPWHTALITSYGRLFTFGDGTFGVLGHGDKETVQYPREVESLSGLRT 443

Query: 378 VQVCARKRKTFVLVD------------TGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILD 425
           + V      T  +V+            +G ++ +G      LG  D+   D  L+P  + 
Sbjct: 444 IAVSCGVWHTAAVVEIIVTQSNSSSVSSGKLFTWGDGDKNRLGHGDK---DPRLKPTCVP 500

Query: 426 SLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG---CLEPTEIFIQEME 482
           +L  ++  +I+ G   TV +T  G++F  G     QLG+    G   CL   ++  + +E
Sbjct: 501 ALIDYNFHKIACGHSLTVGLTTSGQVFTMGSTVYGQLGNLQTDGKLPCLVEDKLASEFVE 560

Query: 483 E 483
           E
Sbjct: 561 E 561


>gi|18411298|ref|NP_565144.1| regulator of chromosome condensation and FYVE zinc finger
           domain-containing protein [Arabidopsis thaliana]
 gi|15811367|gb|AAL08940.1| zinc finger protein [Arabidopsis thaliana]
 gi|332197787|gb|AEE35908.1| regulator of chromosome condensation and FYVE zinc finger
           domain-containing protein [Arabidopsis thaliana]
          Length = 1103

 Score =  132 bits (333), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 101/325 (31%), Positives = 152/325 (46%), Gaps = 21/325 (6%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V Q++    HAAFV + G++FT G+ S    GH    + +F PRLVE+L         A 
Sbjct: 283 VHQIACGVRHAAFVTRQGEIFTWGEESGGRLGH-GIGKDVFHPRLVESLTATSSVDFVAC 341

Query: 225 LNF-TGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 281
             F T  +T+ G ++T G  TH  G LGHG  +    PK IA   E   V  ++ GP + 
Sbjct: 342 GEFHTCAVTLAGELYTWGDGTHNVGLLGHGSDISHWIPKRIAGSLEGLHVASVSCGPWHT 401

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL--- 338
             +T  G +++FG G+   LGHG++     PR +++    G+  + VS G  H  A+   
Sbjct: 402 ALITSYGRLFTFGDGTFGVLGHGDKETVQYPREVESL--SGLRTIAVSCGVWHTAAVVEI 459

Query: 339 ---------DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFV 389
                     SSG ++TWG G    LGHGD+  +  P  + +L  +   ++      T  
Sbjct: 460 IVTQSNSSSVSSGKLFTWGDGDKNRLGHGDKDPRLKPTCVPALIDYNFHKIACGHSLTVG 519

Query: 390 LVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRG 449
           L  +G V+  G   +G LG      +D  L   + D L +  V +IS G YH   +T R 
Sbjct: 520 LTTSGQVFTMGSTVYGQLG---NLQTDGKLPCLVEDKLASEFVEEISCGAYHVAALTSRN 576

Query: 450 RLFGFGDNERAQLGHDTLRGCLEPT 474
            ++ +G     +LGH  L     PT
Sbjct: 577 EVYTWGKGANGRLGHGDLEDRKVPT 601



 Score = 96.3 bits (238), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 83/282 (29%), Positives = 127/282 (45%), Gaps = 20/282 (7%)

Query: 116 ITTGRYHTLLISNSS---VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +  G +HT  ++ +     +  G+   G+LGHG + +  +           HV  VS   
Sbjct: 339 VACGEFHTCAVTLAGELYTWGDGTHNVGLLGHGSDISHWIPKRIAGSLEGLHVASVSCGP 398

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            H A +   G++FT GD +    GH D    +  PR VE+L G+    V+ G+  T  + 
Sbjct: 399 WHTALITSYGRLFTFGDGTFGVLGHGD-KETVQYPREVESLSGLRTIAVSCGVWHTAAVV 457

Query: 233 ------------IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 280
                         G + T G     +LGHGD   R  P  +  L +  +  +IA G S 
Sbjct: 458 EIIVTQSNSSSVSSGKLFTWGDGDKNRLGHGDKDPRLKPTCVPALIDY-NFHKIACGHSL 516

Query: 281 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 340
            + +T +G V++ GS     LG+ +   +L P  ++  +     V  +S G  HV AL S
Sbjct: 517 TVGLTTSGQVFTMGSTVYGQLGNLQTDGKL-PCLVED-KLASEFVEEISCGAYHVAALTS 574

Query: 341 SGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKS-HLAVQVC 381
              VYTWGKG  G LGHGD  D+ +P  + +LK  H+    C
Sbjct: 575 RNEVYTWGKGANGRLGHGDLEDRKVPTIVEALKDRHVKYIAC 616



 Score = 95.1 bits (235), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 84/301 (27%), Positives = 137/301 (45%), Gaps = 21/301 (6%)

Query: 200 TNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTP 259
           T   +  P+ +E+   +   Q+  G+    F+T +G + T G  + G+LGHG   D   P
Sbjct: 265 TRTDVLVPKPLESNIVLDVHQIACGVRHAAFVTRQGEIFTWGEESGGRLGHGIGKDVFHP 324

Query: 260 KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC--LGHGEQHDELQPRAIQT 317
           + +  L    SV  +A G  +  AVT  G +Y++G G++    LGHG       P+ I  
Sbjct: 325 RLVESLTATSSVDFVACGEFHTCAVTLAGELYTWGDGTHNVGLLGHGSDISHWIPKRI-A 383

Query: 318 FRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLA 377
              +G+HV  VS G  H   + S G ++T+G G  G LGHGD+     P  + SL     
Sbjct: 384 GSLEGLHVASVSCGPWHTALITSYGRLFTFGDGTFGVLGHGDKETVQYPREVESLSGLRT 443

Query: 378 VQVCARKRKTFVLVD------------TGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILD 425
           + V      T  +V+            +G ++ +G      LG  D+   D  L+P  + 
Sbjct: 444 IAVSCGVWHTAAVVEIIVTQSNSSSVSSGKLFTWGDGDKNRLGHGDK---DPRLKPTCVP 500

Query: 426 SLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG---CLEPTEIFIQEME 482
           +L  ++  +I+ G   TV +T  G++F  G     QLG+    G   CL   ++  + +E
Sbjct: 501 ALIDYNFHKIACGHSLTVGLTTSGQVFTMGSTVYGQLGNLQTDGKLPCLVEDKLASEFVE 560

Query: 483 E 483
           E
Sbjct: 561 E 561


>gi|126330678|ref|XP_001365078.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 [Monodelphis
           domestica]
          Length = 1051

 Score =  132 bits (333), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 92/266 (34%), Positives = 140/266 (52%), Gaps = 20/266 (7%)

Query: 219 KQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS-----VVQ 273
           K+V  G N + FL   G V+TCG NT GQLGH    ++P        E++G+     ++ 
Sbjct: 38  KEVACGGNHSIFLLEDGEVYTCGLNTKGQLGHEREGNKP--------EQIGALADQHIIH 89

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQ-PRAIQTFRRKGIHVVRVSAGD 332
           +A G S+ LA++  G ++S+G+GS+  LGH    D +  PR I+   ++ I  ++VS G+
Sbjct: 90  VACGESHSLALSDQGQLFSWGAGSDGQLGHTTTEDSVAIPRLIKKLNQQMI--LQVSCGN 147

Query: 333 EHVVALDSSGYVYTWGKGYCGALGHGDEI-DKTLPEPLSSLKSHLAVQVCARKRKTFVLV 391
            H +AL + G  +TWG+   G LG G E   +  P+ + SL+     QV A    +F L 
Sbjct: 148 WHCMALAADGQFFTWGQNRHGQLGLGKEFPSQASPQRVKSLEGIPLAQVAAGGAHSFALS 207

Query: 392 DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRL 451
            +G+V+G+G    G LG  D   +D+   P  +  LR   V  IS G  HT V+T  G +
Sbjct: 208 LSGAVFGWGRNNAGQLGLSDE--TDRQ-SPCHVKLLRTQKVVYISCGEEHTAVLTKSGGV 264

Query: 452 FGFGDNERAQLGHDTLRGCLEPTEIF 477
           F FG     QLGHD++   + P  + 
Sbjct: 265 FTFGAGSFGQLGHDSMNDEVNPRRVL 290



 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 96/309 (31%), Positives = 160/309 (51%), Gaps = 14/309 (4%)

Query: 159 FPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVP 217
           F S   + +V+   NH+ F+L+ G+V+TCG N+    GH R+ N+P      + AL    
Sbjct: 31  FISDRSIKEVACGGNHSIFLLEDGEVYTCGLNTKGQLGHEREGNKP----EQIGALADQH 86

Query: 218 CKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDR-PTPKSIAPLEEVGSVVQIAA 276
              V  G + +  L+ +G + + G+ + GQLGH  T D    P+ I  L +   ++Q++ 
Sbjct: 87  IIHVACGESHSLALSDQGQLFSWGAGSDGQLGHTTTEDSVAIPRLIKKLNQ-QMILQVSC 145

Query: 277 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH-DELQPRAIQTFRRKGIHVVRVSAGDEHV 335
           G  + +A+  +G  +++G   +  LG G++   +  P+ +++   +GI + +V+AG  H 
Sbjct: 146 GNWHCMALAADGQFFTWGQNRHGQLGLGKEFPSQASPQRVKSL--EGIPLAQVAAGGAHS 203

Query: 336 VALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGS 395
            AL  SG V+ WG+   G LG  DE D+  P  +  L++   V +   +  T VL  +G 
Sbjct: 204 FALSLSGAVFGWGRNNAGQLGLSDETDRQSPCHVKLLRTQKVVYISCGEEHTAVLTKSGG 263

Query: 396 VYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV-VTDRGRLFGF 454
           V+ FG   FG LG     ++D+V  PR +  L    V+QI+ G  HT+  V   G ++ F
Sbjct: 264 VFTFGAGSFGQLG--HDSMNDEV-NPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAF 320

Query: 455 GDNERAQLG 463
           G   R QLG
Sbjct: 321 GCGARGQLG 329



 Score =  121 bits (304), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 87/292 (29%), Positives = 139/292 (47%), Gaps = 8/292 (2%)

Query: 119 GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
           G +   L+ +  V++CG +  G LGH  E  +     +I   +  H++ V+  E+H+  +
Sbjct: 44  GNHSIFLLEDGEVYTCGLNTKGQLGHEREGNKP---EQIGALADQHIIHVACGESHSLAL 100

Query: 179 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVH 238
              GQ+F+ G  S    GH  T   +  PRL++ L      QV+ G      L   G   
Sbjct: 101 SDQGQLFSWGAGSDGQLGHTTTEDSVAIPRLIKKLNQQMILQVSCGNWHCMALAADGQFF 160

Query: 239 TCGSNTHGQLGHGDTL-DRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 297
           T G N HGQLG G     + +P+ +  LE +  + Q+AAG ++  A++ +G V+ +G  +
Sbjct: 161 TWGQNRHGQLGLGKEFPSQASPQRVKSLEGI-PLAQVAAGGAHSFALSLSGAVFGWGRNN 219

Query: 298 NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 357
              LG  ++ D   P  ++  R +   VV +S G+EH   L  SG V+T+G G  G LGH
Sbjct: 220 AGQLGLSDETDRQSPCHVKLLRTQ--KVVYISCGEEHTAVLTKSGGVFTFGAGSFGQLGH 277

Query: 358 GDEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLG 408
               D+  P  +  L      Q+ C R+     +  +G +Y FG    G LG
Sbjct: 278 DSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLG 329



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 91/295 (30%), Positives = 137/295 (46%), Gaps = 22/295 (7%)

Query: 114 MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSAS 171
           + +  G  H+L +S+   +FS G+   G LGH   T   V+  R I   +   ++QVS  
Sbjct: 88  IHVACGESHSLALSDQGQLFSWGAGSDGQLGH-TTTEDSVAIPRLIKKLNQQMILQVSCG 146

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
             H   +   GQ FT G N     G          P+ V++L+G+P  QV AG   +  L
Sbjct: 147 NWHCMALAADGQFFTWGQNRHGQLGLGKEFPSQASPQRVKSLEGIPLAQVAAGGAHSFAL 206

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
           ++ G V   G N  GQLG  D  DR +P  +  L     VV I+ G  +   +T +G V+
Sbjct: 207 SLSGAVFGWGRNNAGQLGLSDETDRQSPCHVK-LLRTQKVVYISCGEEHTAVLTKSGGVF 265

Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA-LDSSGYVYTWGKG 350
           +FG+GS   LGH   +DE+ PR +      G  V +++ G +H +A + SSG +Y +G G
Sbjct: 266 TFGAGSFGQLGHDSMNDEVNPRRV--LELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCG 323

Query: 351 YCGALGHGDEIDKTLPEPLS---------------SLKSHLAVQVCARKRKTFVL 390
             G LG G   +   P P+                S K H+   + +   +TFVL
Sbjct: 324 ARGQLGTGHTCNVKCPSPVKGHWAAHNGQLSSRADSFKYHIVKHIFSGGDQTFVL 378


>gi|432856462|ref|XP_004068433.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Oryzias latipes]
          Length = 4777

 Score =  132 bits (332), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 95/326 (29%), Positives = 160/326 (49%), Gaps = 12/326 (3%)

Query: 161  SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQ 220
            SA +VVQV+        V   G+++ CG+ ++   G   ++  I  PR + AL     K+
Sbjct: 2952 SALNVVQVAGGSKSLFAVTVEGKIYACGEATNGRLGLGLSSGTIQIPRQISALSNYVVKK 3011

Query: 221  VT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGP 278
            V   +G      LT+ G V + G    G+LGH   ++   P+ I  L+    +  IA G 
Sbjct: 3012 VAVHSGGRHAMALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALK-TKRIRDIACGS 3070

Query: 279  SYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEHVV 336
            S+  A+T +G +YS+G G    LGHG+   +L+P+ ++     G  V++V+ G  D   +
Sbjct: 3071 SHSAAITSSGELYSWGLGEYGRLGHGDNTTQLRPKLVKVLL--GHRVIQVACGSRDAQTL 3128

Query: 337  ALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSV 396
            AL   G V++WG G  G LG G      +P+ +  L      Q+    + +  L  +G V
Sbjct: 3129 ALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVV 3188

Query: 397  YGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGD 456
            + +G   +  LG    G    V +P+I++ LR   +  ++ G  H + VTD G+++ +GD
Sbjct: 3189 WTWGKGDYFRLG---HGTDVHVRKPQIVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGD 3245

Query: 457  NERAQLGHDTLRGCLEPTEIFIQEME 482
            N+  Q G+ T     +PT   +Q +E
Sbjct: 3246 NDHGQQGNGTTTVNRKPT--LVQGLE 3269



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 84/269 (31%), Positives = 132/269 (49%), Gaps = 6/269 (2%)

Query: 207  PRLVEALKGVPCKQV--TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP 264
            P L+E+++ V  K+V   +G      L+  G V++ G    G+LGHG+      P+ I  
Sbjct: 3971 PTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIES 4030

Query: 265  LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH 324
            L  V  VV IAAG ++   +T +G ++++G G    LGHG+  D+L+P+ +   +   + 
Sbjct: 4031 LRGV-EVVDIAAGGAHSACITASGELFTWGKGRYGRLGHGDSEDQLKPKLVDALQGHRVI 4089

Query: 325  VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARK 384
             V   +GD   + L     V++WG G  G LG G      +P  + SL     V+V    
Sbjct: 4090 DVACGSGDAQTLCLTDDDMVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGS 4149

Query: 385  RKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV 444
            + +  L  +G+VY +G   +  LG    G  D V RPR +  L+   V  I+TG  H V 
Sbjct: 4150 QFSVALTKSGAVYTWGKGDYHRLG---HGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 4206

Query: 445  VTDRGRLFGFGDNERAQLGHDTLRGCLEP 473
             T+ G ++ +GDN+  QLG  T      P
Sbjct: 4207 CTEDGEVYTWGDNDEGQLGDGTTNAIQRP 4235



 Score =  122 bits (306), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 84/280 (30%), Positives = 140/280 (50%), Gaps = 9/280 (3%)

Query: 166  VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 225
            V V++   H   +   G+V++ G+      GH + + P  RPR++E+L+GV    + AG 
Sbjct: 3985 VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRS-PCDRPRVIESLRGVEVVDIAAGG 4043

Query: 226  NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA--AGPSYMLA 283
              +  +T  G + T G   +G+LGHGD+ D+  PK +  L+    V+ +A  +G +  L 
Sbjct: 4044 AHSACITASGELFTWGKGRYGRLGHGDSEDQLKPKLVDALQG-HRVIDVACGSGDAQTLC 4102

Query: 284  VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 343
            +T + +V+S+G G    LG G       P  I +    G+ VV+V  G +  VAL  SG 
Sbjct: 4103 LTDDDMVWSWGDGDYGKLGRGGSDGCKVPMKIDSL--TGLGVVKVECGSQFSVALTKSGA 4160

Query: 344  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 403
            VYTWGKG    LGHG +     P  +  L+    + +           + G VY +G   
Sbjct: 4161 VYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDND 4220

Query: 404  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV 443
             G LG    G ++ + RPR++ +L+   +++++ G  HT+
Sbjct: 4221 EGQLG---DGTTNAIQRPRLVAALQGKKINRVACGSAHTL 4257



 Score =  122 bits (305), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 90/288 (31%), Positives = 142/288 (49%), Gaps = 10/288 (3%)

Query: 183  QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 242
            +VF  G N     G    ++ I  P   E L  +   QV  G      +T+ G ++ CG 
Sbjct: 2922 KVFVWGLNDKDQLGGLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKIYACGE 2980

Query: 243  NTHGQLGHG-DTLDRPTPKSIAPLEE-VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 300
             T+G+LG G  +     P+ I+ L   V   V + +G  + +A+T +G V+S+G G +  
Sbjct: 2981 ATNGRLGLGLSSGTIQIPRQISALSNYVVKKVAVHSGGRHAMALTVDGKVFSWGEGDDGK 3040

Query: 301  LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 360
            LGH  + +  +PR I+  + K I    ++ G  H  A+ SSG +Y+WG G  G LGHGD 
Sbjct: 3041 LGHFSRMNCDKPRLIEALKTKRIR--DIACGSSHSAAITSSGELYSWGLGEYGRLGHGDN 3098

Query: 361  IDKTLPEPLSSLKSHLAVQVC--ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKV 418
              +  P+ +  L  H  +QV   +R  +T  L D G V+ +G   FG LG   RG S+  
Sbjct: 3099 TTQLRPKLVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLG---RGGSEGC 3155

Query: 419  LRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDT 466
              P+ ++ L    V QI  G   ++ +T  G ++ +G  +  +LGH T
Sbjct: 3156 NIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGT 3203



 Score =  121 bits (304), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 90/306 (29%), Positives = 142/306 (46%), Gaps = 19/306 (6%)

Query: 161 SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQ 220
           S+  V Q+  SE     + +SG V+T    S+              P L+  L      +
Sbjct: 400 SSTGVTQIVCSEKVFLILSRSGAVYTQNYKST-----------TLAPMLIHGLSSRKIVK 448

Query: 221 VTAGLNFTGFLTIR--GHVHTCGSNTHGQLGHGDT--LDRPTPKSIAPLEEVGS-VVQIA 275
           + A  +   FL +   G V++ G    G+LGHGD   L+ P   +    ++ G  VVQIA
Sbjct: 449 LAAHPDGQHFLALSTSGEVYSWGCGDGGRLGHGDATYLEEPALITTFSGKQTGKQVVQIA 508

Query: 276 AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHV 335
            G +Y  AVT +G +Y++G G+   LGHG   D   P  +   + + +  V   +GD   
Sbjct: 509 CGSTYSAAVTADGELYTWGRGNYGRLGHGSSEDVTTPMLVTALKGQKVVDVACGSGDAQT 568

Query: 336 VALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGS 395
           +A+  +G V++WG G  G LG G       P+ +  L+    V+VC   + +  L   G 
Sbjct: 569 LAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLVEKLQDLDIVKVCCGSQFSVALTKDGQ 628

Query: 396 VYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFG 455
           VY +G      LG    G  + V  P++LDSL+   V  I+ G  H + +TD G +  +G
Sbjct: 629 VYTWGKGDNQRLG---HGTDEHVRYPKLLDSLQGKKVVDIAVGSTHCLALTDEGEVHSWG 685

Query: 456 DNERAQ 461
            N++ Q
Sbjct: 686 SNDKLQ 691



 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 65/202 (32%), Positives = 111/202 (54%), Gaps = 9/202 (4%)

Query: 271 VVQIAAGPS--YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTF--RRKGIHVV 326
           +V++AA P   + LA++ +G VYS+G G    LGHG+     +P  I TF  ++ G  VV
Sbjct: 446 IVKLAAHPDGQHFLALSTSGEVYSWGCGDGGRLGHGDATYLEEPALITTFSGKQTGKQVV 505

Query: 327 RVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVC--ARK 384
           +++ G  +  A+ + G +YTWG+G  G LGHG   D T P  +++LK    V V   +  
Sbjct: 506 QIACGSTYSAAVTADGELYTWGRGNYGRLGHGSSEDVTTPMLVTALKGQKVVDVACGSGD 565

Query: 385 RKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV 444
            +T  + + G V+ +G   +G LG   RG SD    P++++ L+   + ++  G   +V 
Sbjct: 566 AQTLAVTENGQVWSWGDGDYGKLG---RGGSDGCKTPKLVEKLQDLDIVKVCCGSQFSVA 622

Query: 445 VTDRGRLFGFGDNERAQLGHDT 466
           +T  G+++ +G  +  +LGH T
Sbjct: 623 LTKDGQVYTWGKGDNQRLGHGT 644



 Score =  103 bits (256), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 84/265 (31%), Positives = 127/265 (47%), Gaps = 12/265 (4%)

Query: 96   FLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFT 155
             L+S++H    ++  A N   + G++   L S   V+S G +  G LGHG   + C    
Sbjct: 3973 LLESIQHV--FIKKVAVN---SGGKHCLALSSEGEVYSWGEAEDGKLGHG-NRSPCDRPR 4026

Query: 156  RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 215
             I       VV ++A   H+A +  SG++FT G       GH D+   + +P+LV+AL+G
Sbjct: 4027 VIESLRGVEVVDIAAGGAHSACITASGELFTWGKGRYGRLGHGDSEDQL-KPKLVDALQG 4085

Query: 216  VPCKQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
                 V   +G   T  LT    V + G   +G+LG G +     P  I  L  +G VV+
Sbjct: 4086 HRVIDVACGSGDAQTLCLTDDDMVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLG-VVK 4144

Query: 274  IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
            +  G  + +A+T +G VY++G G    LGHG      +PR +Q    +G  V+ ++ G  
Sbjct: 4145 VECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGL--QGKKVIAIATGSL 4202

Query: 334  HVVALDSSGYVYTWGKGYCGALGHG 358
            H V     G VYTWG    G LG G
Sbjct: 4203 HCVCCTEDGEVYTWGDNDEGQLGDG 4227



 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 75/247 (30%), Positives = 126/247 (51%), Gaps = 12/247 (4%)

Query: 235  GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
            G ++  G N  GQLG   G  +  PTP +++A L  V    Q+  G   + AVT +G +Y
Sbjct: 3895 GTIYGWGHNHRGQLGGIEGAKVKVPTPTEALATLRPV----QLIGGEQTLFAVTADGKLY 3950

Query: 292  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 351
            + G G+   LG G       P  +++ +   I  V V++G +H +AL S G VY+WG+  
Sbjct: 3951 ATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAE 4010

Query: 352  CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 411
             G LGHG+      P  + SL+    V + A    +  +  +G ++ +G   +G LG   
Sbjct: 4011 DGKLGHGNRSPCDRPRVIESLRGVEVVDIAAGGAHSACITASGELFTWGKGRYGRLG--- 4067

Query: 412  RGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG 469
             G S+  L+P+++D+L+ H V  ++  +G   T+ +TD   ++ +GD +  +LG     G
Sbjct: 4068 HGDSEDQLKPKLVDALQGHRVIDVACGSGDAQTLCLTDDDMVWSWGDGDYGKLGRGGSDG 4127

Query: 470  CLEPTEI 476
            C  P +I
Sbjct: 4128 CKVPMKI 4134



 Score = 98.6 bits (244), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 79/242 (32%), Positives = 113/242 (46%), Gaps = 7/242 (2%)

Query: 119  GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
            GR+   L  +  VFS G    G LGH      C     I       +  ++   +H+A +
Sbjct: 3018 GRHAMALTVDGKVFSWGEGDDGKLGHF-SRMNCDKPRLIEALKTKRIRDIACGSSHSAAI 3076

Query: 179  LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN--FTGFLTIRGH 236
              SG++++ G       GH D N    RP+LV+ L G    QV  G     T  LT  G 
Sbjct: 3077 TSSGELYSWGLGEYGRLGHGD-NTTQLRPKLVKVLLGHRVIQVACGSRDAQTLALTDEGL 3135

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 296
            V + G    G+LG G +     P++I  L   G V QI  G  + LA+T +GVV+++G G
Sbjct: 3136 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTWGKG 3194

Query: 297  SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 356
              F LGHG      +P+ ++  R  G  +V V+ G  H +A+  SG VY WG    G  G
Sbjct: 3195 DYFRLGHGTDVHVRKPQIVEGLR--GKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQG 3252

Query: 357  HG 358
            +G
Sbjct: 3253 NG 3254



 Score = 96.3 bits (238), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 82/290 (28%), Positives = 131/290 (45%), Gaps = 24/290 (8%)

Query: 119 GRYHTLLISNSSVFSCGSSLCGVLGHGPET---TQCVSFTRINFPSAAHVVQVSASENHA 175
           G++   L ++  V+S G    G LGHG  T      +  T     +   VVQ++    ++
Sbjct: 455 GQHFLALSTSGEVYSWGCGDGGRLGHGDATYLEEPALITTFSGKQTGKQVVQIACGSTYS 514

Query: 176 AFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI-- 233
           A V   G+++T G  +    GH  ++  +  P LV ALKG     V  G      L +  
Sbjct: 515 AAVTADGELYTWGRGNYGRLGH-GSSEDVTTPMLVTALKGQKVVDVACGSGDAQTLAVTE 573

Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
            G V + G   +G+LG G +    TPK +  L+++  +V++  G  + +A+T +G VY++
Sbjct: 574 NGQVWSWGDGDYGKLGRGGSDGCKTPKLVEKLQDL-DIVKVCCGSQFSVALTKDGQVYTW 632

Query: 294 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 353
           G G N  LGHG       P+ + +   +G  VV ++ G  H +AL   G V++WG     
Sbjct: 633 GKGDNQRLGHGTDEHVRYPKLLDSL--QGKKVVDIAVGSTHCLALTDEGEVHSWGSN--D 688

Query: 354 ALGHGDEI--DKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGW 401
            L H D +  +K  P+ L  L S           K  V +  G    F W
Sbjct: 689 KLQHFDTLFPNKKQPKALPGLNS-----------KHIVGISCGPGQSFAW 727



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 55/209 (26%), Positives = 92/209 (44%), Gaps = 19/209 (9%)

Query: 271 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 330
           V QI       L ++ +G VY+     N+      +   L P  I     + I  +    
Sbjct: 404 VTQIVCSEKVFLILSRSGAVYT----QNY------KSTTLAPMLIHGLSSRKIVKLAAHP 453

Query: 331 GDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLA----VQVCARKRK 386
             +H +AL +SG VY+WG G  G LGHGD      P  +++          VQ+      
Sbjct: 454 DGQHFLALSTSGEVYSWGCGDGGRLGHGDATYLEEPALITTFSGKQTGKQVVQIACGSTY 513

Query: 387 TFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVV 444
           +  +   G +Y +G   +G LG    G S+ V  P ++ +L+   V  ++  +G   T+ 
Sbjct: 514 SAAVTADGELYTWGRGNYGRLG---HGSSEDVTTPMLVTALKGQKVVDVACGSGDAQTLA 570

Query: 445 VTDRGRLFGFGDNERAQLGHDTLRGCLEP 473
           VT+ G+++ +GD +  +LG     GC  P
Sbjct: 571 VTENGQVWSWGDGDYGKLGRGGSDGCKTP 599



 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 67/225 (29%), Positives = 101/225 (44%), Gaps = 8/225 (3%)

Query: 116  ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
            I  G  H+  I++S  ++S G    G LGHG  TTQ +    +       V+QV+     
Sbjct: 3066 IACGSSHSAAITSSGELYSWGLGEYGRLGHGDNTTQ-LRPKLVKVLLGHRVIQVACGSRD 3124

Query: 175  AA--FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            A    +   G VF+ GD      G R  +     P+ +E L G    Q+  G  F+  LT
Sbjct: 3125 AQTLALTDEGLVFSWGDGDFGKLG-RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALT 3183

Query: 233  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
              G V T G   + +LGHG  +    P+ +  L     +V +A G  + LAVT +G VY+
Sbjct: 3184 KSGVVWTWGKGDYFRLGHGTDVHVRKPQIVEGLRG-KKIVHVAVGALHCLAVTDSGQVYA 3242

Query: 293  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
            +G   +   G+G      +P  +Q    +G  + RV+ G  H VA
Sbjct: 3243 WGDNDHGQQGNGTTTVNRKPTLVQGL--EGQKITRVACGSSHSVA 3285



 Score = 53.1 bits (126), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 49/167 (29%), Positives = 75/167 (44%), Gaps = 4/167 (2%)

Query: 118  TGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
            +G   TL L  +  V+S G    G LG G  +  C    +I+  +   VV+V      + 
Sbjct: 4095 SGDAQTLCLTDDDMVWSWGDGDYGKLGRG-GSDGCKVPMKIDSLTGLGVVKVECGSQFSV 4153

Query: 177  FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
             + +SG V+T G       GH   +  + RPR V+ L+G     +  G       T  G 
Sbjct: 4154 ALTKSGAVYTWGKGDYHRLGHGSDDH-VRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGE 4212

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
            V+T G N  GQLG G T     P+ +A L+    + ++A G ++ LA
Sbjct: 4213 VYTWGDNDEGQLGDGTTNAIQRPRLVAALQG-KKINRVACGSAHTLA 4258



 Score = 52.4 bits (124), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 41/173 (23%), Positives = 80/173 (46%), Gaps = 17/173 (9%)

Query: 306  QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTL 365
            +HDE   + +Q   R+          D+  ++   SG +Y WG  + G LG  +     +
Sbjct: 3871 EHDE---QLVQWMNRRP---------DDWTLSAGGSGTIYGWGHNHRGQLGGIEGAKVKV 3918

Query: 366  PEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILD 425
            P P  +L +   VQ+   ++  F +   G +Y     G+G+ G    G ++ V  P +L+
Sbjct: 3919 PTPTEALATLRPVQLIGGEQTLFAVTADGKLYA---TGYGAGGRLGIGGTESVSTPTLLE 3975

Query: 426  SLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 476
            S++   + +++  +G  H + ++  G ++ +G+ E  +LGH     C  P  I
Sbjct: 3976 SIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVI 4028


>gi|297839563|ref|XP_002887663.1| zinc finger protein [Arabidopsis lyrata subsp. lyrata]
 gi|297333504|gb|EFH63922.1| zinc finger protein [Arabidopsis lyrata subsp. lyrata]
          Length = 1103

 Score =  132 bits (332), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 101/325 (31%), Positives = 151/325 (46%), Gaps = 21/325 (6%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V Q++    HAAFV + G++FT G+ S    GH    + +F PRLVE+L         A 
Sbjct: 283 VHQIACGVRHAAFVTRQGEIFTWGEESGGRLGH-GIGKDVFHPRLVESLTATSSVDFVAC 341

Query: 225 LNF-TGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 281
             F T  +T+ G ++T G  TH  G LGHG  +    PK IA   E   V  +  GP + 
Sbjct: 342 GEFHTCAVTLAGELYTWGDGTHNVGLLGHGSDISHWIPKRIAGCLEGLHVASVTCGPWHT 401

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL--- 338
             +T  G +++FG G+   LGHG++     PR +++    G+  + VS G  H  A+   
Sbjct: 402 ALITSYGRLFTFGDGTFGVLGHGDRETVQYPREVESL--SGLRTIAVSCGVWHTAAVVEI 459

Query: 339 ---------DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFV 389
                     SSG ++TWG G    LGHGD+  +  P  + +L  +   ++      T  
Sbjct: 460 IVTQSNSSSVSSGKLFTWGDGDKNRLGHGDKDPRLKPTCVPALIDYNFHKIACGHSLTVG 519

Query: 390 LVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRG 449
           L  +G V+  G   +G LG      +D  L   + D L +  V +IS G YH   +T R 
Sbjct: 520 LTTSGQVFTMGSTVYGQLG---NLQTDGKLPCLVEDKLASEFVEEISCGAYHVAALTSRN 576

Query: 450 RLFGFGDNERAQLGHDTLRGCLEPT 474
            ++ +G     +LGH  L     PT
Sbjct: 577 EVYTWGKGANGRLGHGDLEDRKVPT 601



 Score = 95.1 bits (235), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 82/282 (29%), Positives = 127/282 (45%), Gaps = 20/282 (7%)

Query: 116 ITTGRYHTLLISNSS---VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +  G +HT  ++ +     +  G+   G+LGHG + +  +           HV  V+   
Sbjct: 339 VACGEFHTCAVTLAGELYTWGDGTHNVGLLGHGSDISHWIPKRIAGCLEGLHVASVTCGP 398

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            H A +   G++FT GD +    GH D    +  PR VE+L G+    V+ G+  T  + 
Sbjct: 399 WHTALITSYGRLFTFGDGTFGVLGHGD-RETVQYPREVESLSGLRTIAVSCGVWHTAAVV 457

Query: 233 ------------IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 280
                         G + T G     +LGHGD   R  P  +  L +  +  +IA G S 
Sbjct: 458 EIIVTQSNSSSVSSGKLFTWGDGDKNRLGHGDKDPRLKPTCVPALIDY-NFHKIACGHSL 516

Query: 281 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 340
            + +T +G V++ GS     LG+ +   +L P  ++  +     V  +S G  HV AL S
Sbjct: 517 TVGLTTSGQVFTMGSTVYGQLGNLQTDGKL-PCLVED-KLASEFVEEISCGAYHVAALTS 574

Query: 341 SGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKS-HLAVQVC 381
              VYTWGKG  G LGHGD  D+ +P  + +LK  H+    C
Sbjct: 575 RNEVYTWGKGANGRLGHGDLEDRKVPTLVEALKDRHVKYIAC 616



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 83/301 (27%), Positives = 136/301 (45%), Gaps = 21/301 (6%)

Query: 200 TNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTP 259
           T   +  P+ +E+   +   Q+  G+    F+T +G + T G  + G+LGHG   D   P
Sbjct: 265 TRTDVLVPKPLESNIVLDVHQIACGVRHAAFVTRQGEIFTWGEESGGRLGHGIGKDVFHP 324

Query: 260 KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC--LGHGEQHDELQPRAIQT 317
           + +  L    SV  +A G  +  AVT  G +Y++G G++    LGHG       P+ I  
Sbjct: 325 RLVESLTATSSVDFVACGEFHTCAVTLAGELYTWGDGTHNVGLLGHGSDISHWIPKRIAG 384

Query: 318 FRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLA 377
              +G+HV  V+ G  H   + S G ++T+G G  G LGHGD      P  + SL     
Sbjct: 385 C-LEGLHVASVTCGPWHTALITSYGRLFTFGDGTFGVLGHGDRETVQYPREVESLSGLRT 443

Query: 378 VQVCARKRKTFVLVD------------TGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILD 425
           + V      T  +V+            +G ++ +G      LG  D+   D  L+P  + 
Sbjct: 444 IAVSCGVWHTAAVVEIIVTQSNSSSVSSGKLFTWGDGDKNRLGHGDK---DPRLKPTCVP 500

Query: 426 SLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG---CLEPTEIFIQEME 482
           +L  ++  +I+ G   TV +T  G++F  G     QLG+    G   CL   ++  + +E
Sbjct: 501 ALIDYNFHKIACGHSLTVGLTTSGQVFTMGSTVYGQLGNLQTDGKLPCLVEDKLASEFVE 560

Query: 483 E 483
           E
Sbjct: 561 E 561


>gi|255562792|ref|XP_002522401.1| Ran GTPase binding protein, putative [Ricinus communis]
 gi|223538286|gb|EEF39893.1| Ran GTPase binding protein, putative [Ricinus communis]
          Length = 1042

 Score =  132 bits (332), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 98/328 (29%), Positives = 152/328 (46%), Gaps = 26/328 (7%)

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
           HA  V + G++F+ G+ S    GH      +  P+L++ L G+  + V  G N T  +T 
Sbjct: 309 HAVLVTKPGEIFSWGEESGGRLGH-GIKADVPNPKLIDTLAGMNIELVACGENHTCAVTF 367

Query: 234 RGHVHTCGSNTH--GQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
            G ++T G   +  G LGHG       PK I    E   V  ++ GP +  AVT  G ++
Sbjct: 368 SGDLYTWGDGAYNCGLLGHGSEASHWIPKRIGGDMEGIHVSYVSCGPWHTAAVTSVGQLF 427

Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL------------- 338
           +FG G+   LGHG+      PR ++T R  G+  +RVS G  H  A              
Sbjct: 428 TFGDGTFGALGHGDHSSATVPREVETLR--GLRTIRVSCGVWHTAAAVEITTESSSPGGS 485

Query: 339 --DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSV 396
              + G ++TWG G    LGHGD+  +  PE + +L      QV      T  L   G V
Sbjct: 486 GSSTFGKLFTWGNGDEYRLGHGDKEPRLFPECVVALGDENICQVACGHNLTLALTAAGRV 545

Query: 397 YGFGWMGFGSLGFPDRGVSDKVLRPRILD-SLRAHHVSQISTGLYHTVVVTDRGRLFGFG 455
           Y  G   +G LG P    + KV  P I++  +    + +I+ G YH  V+T +  ++ +G
Sbjct: 546 YTMGSTSYGQLGNPR--ATGKV--PAIVEGKIAGKIIEEIACGSYHVAVLTSKAEVYTWG 601

Query: 456 DNERAQLGHDTLRGCLEPTEI-FIQEME 482
                QLGH   +   +PT + F+++ +
Sbjct: 602 KGTNGQLGHGDNKDRNQPTVVDFLRDKQ 629



 Score =  105 bits (262), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 89/281 (31%), Positives = 131/281 (46%), Gaps = 24/281 (8%)

Query: 106 IVETSAG-NMQ-ITTGRYHTLLISNSS---VFSCGSSLCGVLGHGPETTQCVSFTRINFP 160
           +++T AG N++ +  G  HT  ++ S     +  G+  CG+LGHG E +  +        
Sbjct: 343 LIDTLAGMNIELVACGENHTCAVTFSGDLYTWGDGAYNCGLLGHGSEASHWIPKRIGGDM 402

Query: 161 SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQ 220
              HV  VS    H A V   GQ+FT GD +    GH D +     PR VE L+G+   +
Sbjct: 403 EGIHVSYVSCGPWHTAAVTSVGQLFTFGDGTFGALGHGDHSSATV-PREVETLRGLRTIR 461

Query: 221 VTAGLNFTG---------------FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL 265
           V+ G+  T                  +  G + T G+    +LGHGD   R  P+ +  L
Sbjct: 462 VSCGVWHTAAAVEITTESSSPGGSGSSTFGKLFTWGNGDEYRLGHGDKEPRLFPECVVAL 521

Query: 266 EEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHV 325
            +  ++ Q+A G +  LA+T  G VY+ GS S   LG+     ++   AI   +  G  +
Sbjct: 522 GDE-NICQVACGHNLTLALTAAGRVYTMGSTSYGQLGNPRATGKVP--AIVEGKIAGKII 578

Query: 326 VRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP 366
             ++ G  HV  L S   VYTWGKG  G LGHGD  D+  P
Sbjct: 579 EEIACGSYHVAVLTSKAEVYTWGKGTNGQLGHGDNKDRNQP 619



 Score = 98.2 bits (243), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 80/282 (28%), Positives = 131/282 (46%), Gaps = 22/282 (7%)

Query: 205 FRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP 264
           F P+ +E+   +    +  G      +T  G + + G  + G+LGHG   D P PK I  
Sbjct: 287 FLPKALESKVVLDVHYIACGGRHAVLVTKPGEIFSWGEESGGRLGHGIKADVPNPKLIDT 346

Query: 265 LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC--LGHGEQHDELQPRAIQTFRRKG 322
           L  + ++  +A G ++  AVT +G +Y++G G+  C  LGHG +     P+ I     +G
Sbjct: 347 LAGM-NIELVACGENHTCAVTFSGDLYTWGDGAYNCGLLGHGSEASHWIPKRIGG-DMEG 404

Query: 323 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCA 382
           IHV  VS G  H  A+ S G ++T+G G  GALGHGD    T+P  + +L+    ++V  
Sbjct: 405 IHVSYVSCGPWHTAAVTSVGQLFTFGDGTFGALGHGDHSSATVPREVETLRGLRTIRVSC 464

Query: 383 RKRKTFVLVDT---------------GSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSL 427
               T   V+                G ++ +G      LG  D+   +  L P  + +L
Sbjct: 465 GVWHTAAAVEITTESSSPGGSGSSTFGKLFTWGNGDEYRLGHGDK---EPRLFPECVVAL 521

Query: 428 RAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG 469
              ++ Q++ G   T+ +T  GR++  G     QLG+    G
Sbjct: 522 GDENICQVACGHNLTLALTAAGRVYTMGSTSYGQLGNPRATG 563



 Score = 81.6 bits (200), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 71/242 (29%), Positives = 109/242 (45%), Gaps = 25/242 (10%)

Query: 116 ITTGRYHTLLISN-SSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           ++ G +HT  +++   +F+ G    G LGHG  ++  V    +        ++VS    H
Sbjct: 410 VSCGPWHTAAVTSVGQLFTFGDGTFGALGHGDHSSATVP-REVETLRGLRTIRVSCGVWH 468

Query: 175 AAFVLQS---------------GQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCK 219
            A  ++                G++FT G+   +  GH D    +F P  V AL      
Sbjct: 469 TAAAVEITTESSSPGGSGSSTFGKLFTWGNGDEYRLGHGDKEPRLF-PECVVALGDENIC 527

Query: 220 QVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEE--VGSVVQIAAG 277
           QV  G N T  LT  G V+T GS ++GQLG+     R T K  A +E    G +++  A 
Sbjct: 528 QVACGHNLTLALTAAGRVYTMGSTSYGQLGN----PRATGKVPAIVEGKIAGKIIEEIAC 583

Query: 278 PSYMLAV-TGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVV 336
            SY +AV T    VY++G G+N  LGHG+  D  QP  +   R K +  V   +    ++
Sbjct: 584 GSYHVAVLTSKAEVYTWGKGTNGQLGHGDNKDRNQPTVVDFLRDKQVRAVACGSNFTAII 643

Query: 337 AL 338
            L
Sbjct: 644 CL 645



 Score = 64.3 bits (155), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 49/170 (28%), Positives = 76/170 (44%), Gaps = 4/170 (2%)

Query: 308 DELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPE 367
           D   P+A+++     +H +  + G  H V +   G +++WG+   G LGHG + D   P+
Sbjct: 285 DAFLPKALESKVVLDVHYI--ACGGRHAVLVTKPGEIFSWGEESGGRLGHGIKADVPNPK 342

Query: 368 PLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRP-RILDS 426
            + +L       V   +  T  +  +G +Y +G  G  + G    G       P RI   
Sbjct: 343 LIDTLAGMNIELVACGENHTCAVTFSGDLYTWG-DGAYNCGLLGHGSEASHWIPKRIGGD 401

Query: 427 LRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 476
           +   HVS +S G +HT  VT  G+LF FGD     LGH        P E+
Sbjct: 402 MEGIHVSYVSCGPWHTAAVTSVGQLFTFGDGTFGALGHGDHSSATVPREV 451


>gi|413942403|gb|AFW75052.1| putative regulator of chromosome condensation (RCC1) family
           protein, partial [Zea mays]
          Length = 688

 Score =  132 bits (332), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 99/315 (31%), Positives = 148/315 (46%), Gaps = 21/315 (6%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V  V     HAA V+++G+VFT G++S    GH  T     RPRLVE+L       V  G
Sbjct: 79  VYHVDCGVKHAALVMKNGEVFTWGEDSGGRLGH-GTREDCVRPRLVESLTVSNVDFVACG 137

Query: 225 LNFTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 282
              T  +T  G ++T G  T+  G LGHG+ +    PK I+   E   V  ++ G  +  
Sbjct: 138 EFHTCAVTTTGELYTWGDGTYNVGLLGHGNDVGHWIPKRISGALEGLQVAYVSCGTWHTA 197

Query: 283 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD--- 339
            +T  G +++FG GS   LGHG+      PR +++    G+  + V+ G  H  A+    
Sbjct: 198 LITSMGQLFTFGDGSFGVLGHGDLKSVSYPREVESL--SGLKTIAVACGVWHTAAIVEVI 255

Query: 340 ----------SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFV 389
                     S+G ++TWG G    LGHGD+  +  P  +++L  H   +V      T  
Sbjct: 256 VTRSSSSVKLSAGKLFTWGDGDKHRLGHGDKETRLKPTCVATLIDHDFYRVACGHSLTVA 315

Query: 390 LVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRG 449
           L  +G V   G   +G LG P    SD  +   + D +    V QI+ G YH  V+T+R 
Sbjct: 316 LTTSGQVLSMGNAVYGQLGNPH---SDGRIPCLVEDKIVGEQVLQIACGSYHVAVLTNRS 372

Query: 450 RLFGFGDNERAQLGH 464
            +F +G     +LGH
Sbjct: 373 EVFTWGKGANGRLGH 387



 Score = 95.1 bits (235), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 80/275 (29%), Positives = 121/275 (44%), Gaps = 22/275 (8%)

Query: 116 ITTGRYHTLLISNSS---VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +  G +HT  ++ +     +  G+   G+LGHG +    +            V  VS   
Sbjct: 134 VACGEFHTCAVTTTGELYTWGDGTYNVGLLGHGNDVGHWIPKRISGALEGLQVAYVSCGT 193

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            H A +   GQ+FT GD S    GH D  + +  PR VE+L G+    V  G+  T  + 
Sbjct: 194 WHTALITSMGQLFTFGDGSFGVLGHGDL-KSVSYPREVESLSGLKTIAVACGVWHTAAIV 252

Query: 233 -------------IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPS 279
                          G + T G     +LGHGD   R  P  +A L +     ++A G S
Sbjct: 253 EVIVTRSSSSVKLSAGKLFTWGDGDKHRLGHGDKETRLKPTCVATLID-HDFYRVACGHS 311

Query: 280 YMLAVTGNGVVYSFGSGSNFCLGH-GEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
             +A+T +G V S G   N   G  G  H + +   +   +  G  V++++ G  HV  L
Sbjct: 312 LTVALTTSGQVLSMG---NAVYGQLGNPHSDGRIPCLVEDKIVGEQVLQIACGSYHVAVL 368

Query: 339 DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
            +   V+TWGKG  G LGHGD  D+ +P  + +LK
Sbjct: 369 TNRSEVFTWGKGANGRLGHGDTEDRKVPTLVEALK 403



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 67/229 (29%), Positives = 109/229 (47%), Gaps = 23/229 (10%)

Query: 264 PLEE--VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRK 321
           PLE   V  V  +  G  +   V  NG V+++G  S   LGHG + D ++PR +++    
Sbjct: 70  PLESNLVLDVYHVDCGVKHAALVMKNGEVFTWGEDSGGRLGHGTREDCVRPRLVESLTVS 129

Query: 322 GIHVVRVSAGDEHVVALDSSGYVYTWGKGY--CGALGHGDEIDKTLPEPLSSLKSHLAVQ 379
            +  V  + G+ H  A+ ++G +YTWG G    G LGHG+++   +P+ +S     L V 
Sbjct: 130 NVDFV--ACGEFHTCAVTTTGELYTWGDGTYNVGLLGHGNDVGHWIPKRISGALEGLQVA 187

Query: 380 -VCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTG 438
            V      T ++   G ++ FG   FG LG  D      V  PR ++SL       ++ G
Sbjct: 188 YVSCGTWHTALITSMGQLFTFGDGSFGVLGHGDL---KSVSYPREVESLSGLKTIAVACG 244

Query: 439 LYHTVVVTD-------------RGRLFGFGDNERAQLGHDTLRGCLEPT 474
           ++HT  + +              G+LF +GD ++ +LGH      L+PT
Sbjct: 245 VWHTAAIVEVIVTRSSSSVKLSAGKLFTWGDGDKHRLGHGDKETRLKPT 293



 Score = 73.2 bits (178), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 61/228 (26%), Positives = 105/228 (46%), Gaps = 15/228 (6%)

Query: 116 ITTGRYHTLLISN-SSVFSCGSSLCGVLGHG-------PETTQCVSFTRI-----NFPSA 162
           ++ G +HT LI++   +F+ G    GVLGHG       P   + +S  +           
Sbjct: 189 VSCGTWHTALITSMGQLFTFGDGSFGVLGHGDLKSVSYPREVESLSGLKTIAVACGVWHT 248

Query: 163 AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 222
           A +V+V  + + ++  L +G++FT GD      GH D    + +P  V  L      +V 
Sbjct: 249 AAIVEVIVTRSSSSVKLSAGKLFTWGDGDKHRLGHGDKETRL-KPTCVATLIDHDFYRVA 307

Query: 223 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 282
            G + T  LT  G V + G+  +GQLG+  + D   P  +        V+QIA G  ++ 
Sbjct: 308 CGHSLTVALTTSGQVLSMGNAVYGQLGNPHS-DGRIPCLVEDKIVGEQVLQIACGSYHVA 366

Query: 283 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 330
            +T    V+++G G+N  LGHG+  D   P  ++  + + +  +   A
Sbjct: 367 VLTNRSEVFTWGKGANGRLGHGDTEDRKVPTLVEALKDRAVRYIACGA 414



 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 55/186 (29%), Positives = 85/186 (45%), Gaps = 4/186 (2%)

Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 351
           S  +GS+  +    + D L P+ +++     + V  V  G +H   +  +G V+TWG+  
Sbjct: 48  SVRTGSDTVISSTGRIDILLPKPLES--NLVLDVYHVDCGVKHAALVMKNGEVFTWGEDS 105

Query: 352 CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 411
            G LGHG   D   P  + SL       V   +  T  +  TG +Y +G  G  ++G   
Sbjct: 106 GGRLGHGTREDCVRPRLVESLTVSNVDFVACGEFHTCAVTTTGELYTWG-DGTYNVGLLG 164

Query: 412 RGVSDKVLRP-RILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGC 470
            G       P RI  +L    V+ +S G +HT ++T  G+LF FGD     LGH  L+  
Sbjct: 165 HGNDVGHWIPKRISGALEGLQVAYVSCGTWHTALITSMGQLFTFGDGSFGVLGHGDLKSV 224

Query: 471 LEPTEI 476
             P E+
Sbjct: 225 SYPREV 230



 Score = 43.1 bits (100), Expect = 0.30,   Method: Compositional matrix adjust.
 Identities = 34/110 (30%), Positives = 53/110 (48%), Gaps = 8/110 (7%)

Query: 125 LISNSSVFSCGSSLCGVLG--HGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSG 182
           L ++  V S G+++ G LG  H      C+   +I       V+Q++    H A +    
Sbjct: 316 LTTSGQVLSMGNAVYGQLGNPHSDGRIPCLVEDKI---VGEQVLQIACGSYHVAVLTNRS 372

Query: 183 QVFTCGDNSSFCCGHRDT-NRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
           +VFT G  ++   GH DT +R +  P LVEALK    + +  G NFT  +
Sbjct: 373 EVFTWGKGANGRLGHGDTEDRKV--PTLVEALKDRAVRYIACGANFTAAI 420


>gi|297838741|ref|XP_002887252.1| hypothetical protein ARALYDRAFT_476103 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297333093|gb|EFH63511.1| hypothetical protein ARALYDRAFT_476103 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 1027

 Score =  132 bits (332), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 107/386 (27%), Positives = 169/386 (43%), Gaps = 28/386 (7%)

Query: 119 GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN----- 173
           G YH    +   VF  G S+C  +  G   +   +   +  P A     V  ++N     
Sbjct: 237 GSYHEDFDALGDVFVWGESICDGVLTGTGNSLNSTTEDVLLPKALESTIVLDAQNIACGK 296

Query: 174 -HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            HA  V + G++F+ G+              + +P+ + +++G+  K +  G   T  +T
Sbjct: 297 CHAVLVTKQGEIFSWGEGKGGK-LGHGLETDVQQPKFISSVRGLGFKSLACGDFHTCAIT 355

Query: 233 IRGHVHTCGSNTHG--QLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 290
             G +++ G  TH    LGHG+      PK +    +   V  +A GP +   V  +G +
Sbjct: 356 QSGDLYSWGDGTHNVDLLGHGNESSCWIPKRVTGALQGLYVSYVACGPWHTAVVASSGQL 415

Query: 291 YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL------------ 338
           ++FG GS   LGHG++     PR ++     G+ V +V+ G  H  AL            
Sbjct: 416 FTFGDGSFGALGHGDRRSTSVPREVKIL--SGLIVTKVACGVWHTAALVEVTNEASEAEV 473

Query: 339 -DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVY 397
             S G V+TWG G  G LGHGD   + LPE + SL +    QV      T  L  TG VY
Sbjct: 474 GSSRGQVFTWGDGEKGQLGHGDNDAQLLPECVISLSNENICQVACGHSLTVSLTSTGHVY 533

Query: 398 GFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDN 457
             G   +G LG P    +      R+   +    V +I+ G YH  V+T +  ++ +G  
Sbjct: 534 TMGSTAYGQLGNP---TAKGNFPARVEGDIVEASVEEIACGSYHVAVLTSKSEIYTWGKG 590

Query: 458 ERAQLGHDTLRGCLEPTEI-FIQEME 482
              QLGH T+    EP  + F++E +
Sbjct: 591 LNGQLGHGTIENKREPAVVGFLKEKQ 616



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 108/405 (26%), Positives = 161/405 (39%), Gaps = 58/405 (14%)

Query: 23  TSGRLSAVDLAHLELTSKTFGGSHGLYPQKFRSLVD--LAASQLC---------ALHS-- 69
           +S R S  D   L L+S     SHG Y + F +L D  +    +C         +L+S  
Sbjct: 213 SSLRFSTNDPIRLSLSSAVSTSSHGSYHEDFDALGDVFVWGESICDGVLTGTGNSLNSTT 272

Query: 70  ----IYAGMSRNVQIELLN----RCNG----------NWKRVLRFLQSVEHSSDIVETS- 110
               +   +   + ++  N    +C+           +W             +D+ +   
Sbjct: 273 EDVLLPKALESTIVLDAQNIACGKCHAVLVTKQGEIFSWGEGKGGKLGHGLETDVQQPKF 332

Query: 111 ------AGNMQITTGRYHTLLISNS-SVFSCGSSLCGV--LGHGPETTQCVSFTRINFPS 161
                  G   +  G +HT  I+ S  ++S G     V  LGHG E++  +         
Sbjct: 333 ISSVRGLGFKSLACGDFHTCAITQSGDLYSWGDGTHNVDLLGHGNESSCWIPKRVTGALQ 392

Query: 162 AAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQV 221
             +V  V+    H A V  SGQ+FT GD S    GH D  R    PR V+ L G+   +V
Sbjct: 393 GLYVSYVACGPWHTAVVASSGQLFTFGDGSFGALGHGD-RRSTSVPREVKILSGLIVTKV 451

Query: 222 TAGLNFTGFL-------------TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEV 268
             G+  T  L             + RG V T G    GQLGHGD   +  P+ +  L   
Sbjct: 452 ACGVWHTAALVEVTNEASEAEVGSSRGQVFTWGDGEKGQLGHGDNDAQLLPECVISLSN- 510

Query: 269 GSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRV 328
            ++ Q+A G S  +++T  G VY+ GS +   LG+         R         +    +
Sbjct: 511 ENICQVACGHSLTVSLTSTGHVYTMGSTAYGQLGNPTAKGNFPARVEGDIVEASVE--EI 568

Query: 329 SAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
           + G  HV  L S   +YTWGKG  G LGHG   +K  P  +  LK
Sbjct: 569 ACGSYHVAVLTSKSEIYTWGKGLNGQLGHGTIENKREPAVVGFLK 613



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 67/229 (29%), Positives = 105/229 (45%), Gaps = 25/229 (10%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHG-------PETTQCVS---FTRI--NFPSA 162
           +  G +HT ++++S  +F+ G    G LGHG       P   + +S    T++       
Sbjct: 399 VACGPWHTAVVASSGQLFTFGDGSFGALGHGDRRSTSVPREVKILSGLIVTKVACGVWHT 458

Query: 163 AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 222
           A +V+V+   + A      GQVFT GD      GH D +  +  P  V +L      QV 
Sbjct: 459 AALVEVTNEASEAEVGSSRGQVFTWGDGEKGQLGHGDNDAQLL-PECVISLSNENICQVA 517

Query: 223 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ-----IAAG 277
            G + T  LT  GHV+T GS  +GQLG+      PT K   P    G +V+     IA G
Sbjct: 518 CGHSLTVSLTSTGHVYTMGSTAYGQLGN------PTAKGNFPARVEGDIVEASVEEIACG 571

Query: 278 PSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVV 326
             ++  +T    +Y++G G N  LGHG   ++ +P  +   + K +  +
Sbjct: 572 SYHVAVLTSKSEIYTWGKGLNGQLGHGTIENKREPAVVGFLKEKQVKAI 620


>gi|356501403|ref|XP_003519514.1| PREDICTED: uncharacterized protein LOC100806439 [Glycine max]
          Length = 1109

 Score =  132 bits (332), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 99/317 (31%), Positives = 153/317 (48%), Gaps = 25/317 (7%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V  ++    HAA V + G++F+ G+ +    GH   +  +  P+L+EAL     + V  G
Sbjct: 312 VQNIACGGRHAALVTKQGEIFSWGEEAGGRLGH-GVDSDVLHPKLIEALSNTNIELVACG 370

Query: 225 LNFTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSI-APLEEVGSVVQIAAGPSYM 281
              T  +T+ G ++T G+ T+  G LGHG+ +    PK +  PLE +  V  I+ GP + 
Sbjct: 371 EYHTCAVTLSGDLYTWGNGTYNCGLLGHGNQVSHWVPKRVNGPLEGI-HVSYISCGPWHT 429

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL--- 338
             VT  G +++FG G+   LGHG++     PR +++   KG+  VR + G  H  A+   
Sbjct: 430 AVVTSAGQLFTFGDGTFGALGHGDRKSVSLPREVESL--KGLRTVRAACGVWHTAAVVEV 487

Query: 339 ---------DSSGYVYTWGKGYCGALGHGDEIDKTLPE--PLSSLKSHLAVQVCARKRKT 387
                     SSG ++TWG G  G LGHGD+  K +P    L ++K +     C     T
Sbjct: 488 MVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTRVALVNVKPNFCQVACGHSL-T 546

Query: 388 FVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTD 447
             L   G VY  G   +G LG P    +D  L   +   L    V +I+ G YH  V+T 
Sbjct: 547 VALTTKGHVYTMGSPVYGQLGIPQ---ADGKLPICVEWKLSESFVEEIACGAYHVAVLTS 603

Query: 448 RGRLFGFGDNERAQLGH 464
           R  ++ +G     +LGH
Sbjct: 604 RTEVYTWGKGANGRLGH 620



 Score =  116 bits (290), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 95/291 (32%), Positives = 136/291 (46%), Gaps = 21/291 (7%)

Query: 100 VEHSSDIVETSAGNMQ-ITTGRYHTLLISNSS---VFSCGSSLCGVLGHGPETTQCVSFT 155
           V H   I   S  N++ +  G YHT  ++ S     +  G+  CG+LGHG + +  V   
Sbjct: 350 VLHPKLIEALSNTNIELVACGEYHTCAVTLSGDLYTWGNGTYNCGLLGHGNQVSHWVP-K 408

Query: 156 RINFP-SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALK 214
           R+N P    HV  +S    H A V  +GQ+FT GD +    GH D  + +  PR VE+LK
Sbjct: 409 RVNGPLEGIHVSYISCGPWHTAVVTSAGQLFTFGDGTFGALGHGD-RKSVSLPREVESLK 467

Query: 215 GVPCKQVTAGLNFTGFLT------------IRGHVHTCGSNTHGQLGHGDTLDRPTPKSI 262
           G+   +   G+  T  +               G + T G    G+LGHGD   +  P  +
Sbjct: 468 GLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTRV 527

Query: 263 APLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKG 322
           A +    +  Q+A G S  +A+T  G VY+ GS     LG   Q D   P  ++ ++   
Sbjct: 528 ALVNVKPNFCQVACGHSLTVALTTKGHVYTMGSPVYGQLGI-PQADGKLPICVE-WKLSE 585

Query: 323 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
             V  ++ G  HV  L S   VYTWGKG  G LGHGD  D+  P  + +LK
Sbjct: 586 SFVEEIACGAYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNTPTLVEALK 636



 Score =  102 bits (254), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 77/246 (31%), Positives = 118/246 (47%), Gaps = 27/246 (10%)

Query: 251 GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDEL 310
           G  +D   PKS+     V  V  IA G  +   VT  G ++S+G  +   LGHG   D L
Sbjct: 293 GVKMDSLFPKSLESAV-VLDVQNIACGGRHAALVTKQGEIFSWGEEAGGRLGHGVDSDVL 351

Query: 311 QPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY--CGALGHGDEIDKTLPE- 367
            P+ I+      I +V  + G+ H  A+  SG +YTWG G   CG LGHG+++   +P+ 
Sbjct: 352 HPKLIEALSNTNIELV--ACGEYHTCAVTLSGDLYTWGNGTYNCGLLGHGNQVSHWVPKR 409

Query: 368 ---PLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRIL 424
              PL  +  H++   C     T V+   G ++ FG   FG+LG  DR     V  PR +
Sbjct: 410 VNGPLEGI--HVSYISCG-PWHTAVVTSAGQLFTFGDGTFGALGHGDR---KSVSLPREV 463

Query: 425 DSLRAHHVSQISTGLYHTVVVTD------------RGRLFGFGDNERAQLGHDTLRGCLE 472
           +SL+     + + G++HT  V +             G+LF +GD ++ +LGH      L 
Sbjct: 464 ESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLV 523

Query: 473 PTEIFI 478
           PT + +
Sbjct: 524 PTRVAL 529



 Score = 96.3 bits (238), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 83/295 (28%), Positives = 137/295 (46%), Gaps = 24/295 (8%)

Query: 207 PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 266
           P+ +E+   +  + +  G      +T +G + + G    G+LGHG   D   PK I  L 
Sbjct: 301 PKSLESAVVLDVQNIACGGRHAALVTKQGEIFSWGEEAGGRLGHGVDSDVLHPKLIEALS 360

Query: 267 EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC--LGHGEQHDELQPRAIQTFRRKGIH 324
              ++  +A G  +  AVT +G +Y++G+G+  C  LGHG Q     P+ +     +GIH
Sbjct: 361 NT-NIELVACGEYHTCAVTLSGDLYTWGNGTYNCGLLGHGNQVSHWVPKRVNG-PLEGIH 418

Query: 325 VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARK 384
           V  +S G  H   + S+G ++T+G G  GALGHGD    +LP  + SLK    V+     
Sbjct: 419 VSYISCGPWHTAVVTSAGQLFTFGDGTFGALGHGDRKSVSLPREVESLKGLRTVRAACGV 478

Query: 385 RKTFVLVDT------------GSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHV 432
             T  +V+             G ++ +G    G LG  D+    K++  R+       + 
Sbjct: 479 WHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEA--KLVPTRVALVNVKPNF 536

Query: 433 SQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG----CLEP--TEIFIQEM 481
            Q++ G   TV +T +G ++  G     QLG     G    C+E   +E F++E+
Sbjct: 537 CQVACGHSLTVALTTKGHVYTMGSPVYGQLGIPQADGKLPICVEWKLSESFVEEI 591



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 66/227 (29%), Positives = 103/227 (45%), Gaps = 21/227 (9%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSASEN 173
           I+ G +HT +++++  +F+ G    G LGHG   +  VS  R +        V+ +    
Sbjct: 422 ISCGPWHTAVVTSAGQLFTFGDGTFGALGHGDRKS--VSLPREVESLKGLRTVRAACGVW 479

Query: 174 HAAFVLQ------------SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCK-- 219
           H A V++            SG++FT GD      GH D    +   R+  AL  V     
Sbjct: 480 HTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTRV--ALVNVKPNFC 537

Query: 220 QVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPS 279
           QV  G + T  LT +GHV+T GS  +GQLG     D   P  +        V +IA G  
Sbjct: 538 QVACGHSLTVALTTKGHVYTMGSPVYGQLGIPQA-DGKLPICVEWKLSESFVEEIACGAY 596

Query: 280 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVV 326
           ++  +T    VY++G G+N  LGHG+  D   P  ++  + K +  +
Sbjct: 597 HVAVLTSRTEVYTWGKGANGRLGHGDTDDRNTPTLVEALKDKDVKSI 643



 Score = 52.8 bits (125), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 54/197 (27%), Positives = 86/197 (43%), Gaps = 17/197 (8%)

Query: 92  RVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQC 151
           R +R    V H++ +VE       +  G   +   S+  +F+ G    G LGHG +  + 
Sbjct: 470 RTVRAACGVWHTAAVVE-------VMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKL 522

Query: 152 VSFTRINFPSAA-HVVQVSASENHAAFVLQSGQVFTCGDNSSFCCG--HRDTNRPI-FRP 207
           V  TR+   +   +  QV+   +    +   G V+T G       G    D   PI    
Sbjct: 523 VP-TRVALVNVKPNFCQVACGHSLTVALTTKGHVYTMGSPVYGQLGIPQADGKLPICVEW 581

Query: 208 RLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEE 267
           +L E+      +++  G      LT R  V+T G   +G+LGHGDT DR TP  +  L++
Sbjct: 582 KLSESF----VEEIACGAYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNTPTLVEALKD 637

Query: 268 VGSVVQIAAGPSYMLAV 284
              V  IA G ++  A+
Sbjct: 638 -KDVKSIACGTNFTAAI 653



 Score = 38.9 bits (89), Expect = 6.1,   Method: Compositional matrix adjust.
 Identities = 36/127 (28%), Positives = 57/127 (44%), Gaps = 9/127 (7%)

Query: 115 QITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQ---CVSFTRINFPSAAHVVQVSA 170
           Q+  G   T+ L +   V++ GS + G LG      +   CV +      S + V +++ 
Sbjct: 538 QVACGHSLTVALTTKGHVYTMGSPVYGQLGIPQADGKLPICVEWKL----SESFVEEIAC 593

Query: 171 SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
              H A +    +V+T G  ++   GH DT+     P LVEALK    K +  G NFT  
Sbjct: 594 GAYHVAVLTSRTEVYTWGKGANGRLGHGDTD-DRNTPTLVEALKDKDVKSIACGTNFTAA 652

Query: 231 LTIRGHV 237
           + +   V
Sbjct: 653 ICLHKWV 659


>gi|442629373|ref|NP_001261249.1| CG9153, isoform C [Drosophila melanogaster]
 gi|323301230|gb|ADX35957.1| LD13353p [Drosophila melanogaster]
 gi|440215116|gb|AGB93944.1| CG9153, isoform C [Drosophila melanogaster]
          Length = 1062

 Score =  132 bits (332), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 109/362 (30%), Positives = 168/362 (46%), Gaps = 24/362 (6%)

Query: 125 LISNSSVFSCGSSLCGVLGHG-PETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQ 183
           + S   ++  GS+  G LG G  E  Q ++ ++I +     V QV+    H  F+  +G+
Sbjct: 1   MASGKELYCWGSTSHGQLGLGGIEDEQILTPSQIPWTPDTAVQQVACGHRHTLFLTATGK 60

Query: 184 VFTCGDNSSFCCGHR-DTNRPIFRP-RLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCG 241
           V+ CG N     GH   T RP   P  L+  L+     Q+  G   +  L+  G V + G
Sbjct: 61  VYACGSNDYSQLGHDLPTKRPRMSPFLLIPELQDYVIIQICCGSRHSLALSDWGQVLSWG 120

Query: 242 SNTHGQLGHGDTLDRPTPKSIAPLEEV------GSVVQIAAGPSYMLAVTGNGVVYSFGS 295
            N  GQLGH       T K I  L +V       +VVQIA G ++ LA+T  G +YS+GS
Sbjct: 121 DNDCGQLGHA------TDKEIVQLPKVVRQLVTKTVVQIACGNNHSLALTSCGELYSWGS 174

Query: 296 GSNFCLGHGEQHDELQ---PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 352
                LG    +D      P  + T    GI +  ++ G  H   +  SG V+ WG+  C
Sbjct: 175 NIYGQLGVNSPNDLTHCNYPLRLTTLL--GIPLAAIACGGNHSFLISKSGAVFGWGRNNC 232

Query: 353 GALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDR 412
           G LG  DE +++ P  L +L++     V      +  L + G V+  G   +G LG    
Sbjct: 233 GQLGLNDETNRSYPTQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGAYGQLG---H 289

Query: 413 GVSDKVLRPRILDSLRAHHVSQISTGLYHTV-VVTDRGRLFGFGDNERAQLGHDTLRGCL 471
           G S   + PR++  L    ++Q++ G  HT+ +V  RGR++ FG     QLG  + +  +
Sbjct: 290 GFSSNEMLPRMVMELMGSTITQVACGNRHTLALVPSRGRVYAFGLGSSGQLGTRSTKSLM 349

Query: 472 EP 473
            P
Sbjct: 350 LP 351



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 92/303 (30%), Positives = 137/303 (45%), Gaps = 14/303 (4%)

Query: 115 QITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAH--VVQVSAS 171
           Q+  G  HTL ++ +  V++CGS+    LGH   T +      +  P      ++Q+   
Sbjct: 44  QVACGHRHTLFLTATGKVYACGSNDYSQLGHDLPTKRPRMSPFLLIPELQDYVIIQICCG 103

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
             H+  +   GQV + GDN     GH      +  P++V  L      Q+  G N +  L
Sbjct: 104 SRHSLALSDWGQVLSWGDNDCGQLGHATDKEIVQLPKVVRQLVTKTVVQIACGNNHSLAL 163

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRP---TPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG 288
           T  G +++ GSN +GQLG     D      P  +  L  +  +  IA G ++   ++ +G
Sbjct: 164 TSCGELYSWGSNIYGQLGVNSPNDLTHCNYPLRLTTLLGI-PLAAIACGGNHSFLISKSG 222

Query: 289 VVYSFGSGSNFC--LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYT 346
            V  FG G N C  LG  ++ +   P  ++T R  G+    V+ GDE  V L + G V+T
Sbjct: 223 AV--FGWGRNNCGQLGLNDETNRSYPTQLKTLRTLGVRF--VACGDEFSVFLTNEGGVFT 278

Query: 347 WGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDT-GSVYGFGWMGFG 405
            G G  G LGHG   ++ LP  +  L      QV    R T  LV + G VY FG    G
Sbjct: 279 CGAGAYGQLGHGFSSNEMLPRMVMELMGSTITQVACGNRHTLALVPSRGRVYAFGLGSSG 338

Query: 406 SLG 408
            LG
Sbjct: 339 QLG 341



 Score = 94.7 bits (234), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 79/263 (30%), Positives = 119/263 (45%), Gaps = 17/263 (6%)

Query: 114 MQITTGRYHTLLISN-SSVFSCGSSLCGVLGHG--PETTQCVSFTRINFPSAAHVVQVSA 170
           +QI  G  H+L +S+   V S G + CG LGH    E  Q     R        VVQ++ 
Sbjct: 98  IQICCGSRHSLALSDWGQVLSWGDNDCGQLGHATDKEIVQLPKVVRQLVTKT--VVQIAC 155

Query: 171 SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRP-----IFRPRLVEALKGVPCKQVTAGL 225
             NH+  +   G++++ G N     G    N P        P  +  L G+P   +  G 
Sbjct: 156 GNNHSLALTSCGELYSWGSN---IYGQLGVNSPNDLTHCNYPLRLTTLLGIPLAAIACGG 212

Query: 226 NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 285
           N +  ++  G V   G N  GQLG  D  +R  P  +  L  +G V  +A G  + + +T
Sbjct: 213 NHSFLISKSGAVFGWGRNNCGQLGLNDETNRSYPTQLKTLRTLG-VRFVACGDEFSVFLT 271

Query: 286 GNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL-DSSGYV 344
             G V++ G+G+   LGHG   +E+ PR +      G  + +V+ G+ H +AL  S G V
Sbjct: 272 NEGGVFTCGAGAYGQLGHGFSSNEMLPRMVMELM--GSTITQVACGNRHTLALVPSRGRV 329

Query: 345 YTWGKGYCGALGHGDEIDKTLPE 367
           Y +G G  G LG        LP+
Sbjct: 330 YAFGLGSSGQLGTRSTKSLMLPQ 352



 Score = 89.7 bits (221), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 70/246 (28%), Positives = 111/246 (45%), Gaps = 7/246 (2%)

Query: 236 HVHTCGSNTHGQLGHGDTLDRP--TPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
            ++  GS +HGQLG G   D    TP  I P     +V Q+A G  + L +T  G VY+ 
Sbjct: 6   ELYCWGSTSHGQLGLGGIEDEQILTPSQI-PWTPDTAVQQVACGHRHTLFLTATGKVYAC 64

Query: 294 GSGSNFCLGHG--EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 351
           GS     LGH    +   + P  +    +  + ++++  G  H +AL   G V +WG   
Sbjct: 65  GSNDYSQLGHDLPTKRPRMSPFLLIPELQDYV-IIQICCGSRHSLALSDWGQVLSWGDND 123

Query: 352 CGALGHG-DEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFP 410
           CG LGH  D+    LP+ +  L +   VQ+      +  L   G +Y +G   +G LG  
Sbjct: 124 CGQLGHATDKEIVQLPKVVRQLVTKTVVQIACGNNHSLALTSCGELYSWGSNIYGQLGVN 183

Query: 411 DRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGC 470
                     P  L +L    ++ I+ G  H+ +++  G +FG+G N   QLG +     
Sbjct: 184 SPNDLTHCNYPLRLTTLLGIPLAAIACGGNHSFLISKSGAVFGWGRNNCGQLGLNDETNR 243

Query: 471 LEPTEI 476
             PT++
Sbjct: 244 SYPTQL 249



 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 69/208 (33%), Positives = 107/208 (51%), Gaps = 10/208 (4%)

Query: 114 MQITTGRYHTL-LISNSSVFSCGSSLCGVLG-HGP-ETTQCVSFTRINFPSAAHVVQVSA 170
           +QI  G  H+L L S   ++S GS++ G LG + P + T C    R+       +  ++ 
Sbjct: 151 VQIACGNNHSLALTSCGELYSWGSNIYGQLGVNSPNDLTHCNYPLRLTTLLGIPLAAIAC 210

Query: 171 SENHAAFVLQSGQVFTCGDNSSFCCGHRD-TNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
             NH+  + +SG VF  G N+    G  D TNR    P  ++ L+ +  + V  G  F+ 
Sbjct: 211 GGNHSFLISKSGAVFGWGRNNCGQLGLNDETNRSY--PTQLKTLRTLGVRFVACGDEFSV 268

Query: 230 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGN 287
           FLT  G V TCG+  +GQLGHG + +   P+ +  +E +GS + Q+A G  + LA V   
Sbjct: 269 FLTNEGGVFTCGAGAYGQLGHGFSSNEMLPRMV--MELMGSTITQVACGNRHTLALVPSR 326

Query: 288 GVVYSFGSGSNFCLGHGEQHDELQPRAI 315
           G VY+FG GS+  LG       + P+ +
Sbjct: 327 GRVYAFGLGSSGQLGTRSTKSLMLPQVV 354



 Score = 39.3 bits (90), Expect = 4.5,   Method: Compositional matrix adjust.
 Identities = 28/91 (30%), Positives = 48/91 (52%), Gaps = 6/91 (6%)

Query: 396 VYGFGWMGFGSLGFPDRGVSD-KVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 454
           +Y +G    G LG    G+ D ++L P  +       V Q++ G  HT+ +T  G+++  
Sbjct: 7   LYCWGSTSHGQLGL--GGIEDEQILTPSQIPWTPDTAVQQVACGHRHTLFLTATGKVYAC 64

Query: 455 GDNERAQLGHD--TLRGCLEPTEIFIQEMEE 483
           G N+ +QLGHD  T R  + P  + I E+++
Sbjct: 65  GSNDYSQLGHDLPTKRPRMSPF-LLIPELQD 94


>gi|139948634|ref|NP_001077132.1| probable E3 ubiquitin-protein ligase HERC3 [Bos taurus]
 gi|124829040|gb|AAI33342.1| HERC3 protein [Bos taurus]
 gi|296486686|tpg|DAA28799.1| TPA: hect domain and RLD 3 [Bos taurus]
          Length = 1050

 Score =  132 bits (331), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 96/301 (31%), Positives = 147/301 (48%), Gaps = 29/301 (9%)

Query: 193 FCCGHRDTNRP---------IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 243
            C G+    +P         +  P++   +     K+V  G N + FL   G V+TCG N
Sbjct: 2   LCWGYWSLGQPGISPNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGVN 61

Query: 244 THGQLGHGDTLDRPTPKSIAPLEEVGS-----VVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
           T GQLGH    ++P        E++G+     +V +A G S+ LA++  G ++S+G+GS+
Sbjct: 62  TKGQLGHEREGNKP--------EQIGALADQHIVHVACGESHSLALSDQGQLFSWGAGSD 113

Query: 299 FCLGHGEQHDELQ-PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 357
             LG     D +  PR IQ   ++ I  ++VS G+ H +AL + G  +TWG+   G LG 
Sbjct: 114 GQLGLMTIEDSVAVPRLIQKLNQQTI--LQVSCGNWHCLALAADGQFFTWGRNSHGQLGL 171

Query: 358 GDEI-DKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSD 416
           G E   +  P+ + SL+     QV A    +F L  +G+V+G+G    G LG  D    +
Sbjct: 172 GKEFPSQASPQRVRSLEGIPLAQVVAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRE 231

Query: 417 KVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 476
               P  +  LR   V  IS G  HT V+T  G +F FG     QLGHD++   + P  +
Sbjct: 232 S---PCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRV 288

Query: 477 F 477
            
Sbjct: 289 L 289



 Score =  121 bits (304), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 96/309 (31%), Positives = 157/309 (50%), Gaps = 14/309 (4%)

Query: 159 FPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVP 217
           F S   V +V+   NH+ F+L+ G+V+TCG N+    GH R+ N+P      + AL    
Sbjct: 30  FISDRSVKEVACGGNHSVFLLEDGEVYTCGVNTKGQLGHEREGNKP----EQIGALADQH 85

Query: 218 CKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDR-PTPKSIAPLEEVGSVVQIAA 276
              V  G + +  L+ +G + + G+ + GQLG     D    P+ I  L +  +++Q++ 
Sbjct: 86  IVHVACGESHSLALSDQGQLFSWGAGSDGQLGLMTIEDSVAVPRLIQKLNQ-QTILQVSC 144

Query: 277 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH-DELQPRAIQTFRRKGIHVVRVSAGDEHV 335
           G  + LA+  +G  +++G  S+  LG G++   +  P+ +++   +GI + +V AG  H 
Sbjct: 145 GNWHCLALAADGQFFTWGRNSHGQLGLGKEFPSQASPQRVRSL--EGIPLAQVVAGGAHS 202

Query: 336 VALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGS 395
            AL  SG V+ WG    G LG  DE D+  P  +  L++   V +   +  T VL  +G 
Sbjct: 203 FALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGG 262

Query: 396 VYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV-VTDRGRLFGF 454
           V+ FG    G LG     ++D+V  PR +  L    V+QI+ G  HT+  V   G ++ F
Sbjct: 263 VFTFGAGSCGQLG--HDSMNDEV-NPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAF 319

Query: 455 GDNERAQLG 463
           G   R QLG
Sbjct: 320 GCGARGQLG 328



 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 93/320 (29%), Positives = 148/320 (46%), Gaps = 11/320 (3%)

Query: 119 GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
           G +   L+ +  V++CG +  G LGH  E  +     +I   +  H+V V+  E+H+  +
Sbjct: 43  GNHSVFLLEDGEVYTCGVNTKGQLGHEREGNKP---EQIGALADQHIVHVACGESHSLAL 99

Query: 179 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVH 238
              GQ+F+ G  S    G       +  PRL++ L      QV+ G      L   G   
Sbjct: 100 SDQGQLFSWGAGSDGQLGLMTIEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFF 159

Query: 239 TCGSNTHGQLGHGDTL-DRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 297
           T G N+HGQLG G     + +P+ +  LE +  + Q+ AG ++  A++ +G V+ +G  +
Sbjct: 160 TWGRNSHGQLGLGKEFPSQASPQRVRSLEGI-PLAQVVAGGAHSFALSLSGAVFGWGMNN 218

Query: 298 NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 357
              LG  ++ D   P  ++  R +   VV +S G+EH   L  SG V+T+G G CG LGH
Sbjct: 219 AGQLGLSDEKDRESPCHVKLLRTQ--KVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGH 276

Query: 358 GDEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSD 416
               D+  P  +  L      Q+ C R+     +  +G +Y FG    G LG    G + 
Sbjct: 277 DSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLG---TGHTC 333

Query: 417 KVLRPRILDSLRAHHVSQIS 436
            V  P  +    A H  Q+S
Sbjct: 334 NVKCPSPVKGYWAAHSGQLS 353



 Score =  104 bits (260), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 88/294 (29%), Positives = 132/294 (44%), Gaps = 20/294 (6%)

Query: 114 MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           + +  G  H+L +S+   +FS G+   G LG             I   +   ++QVS   
Sbjct: 87  VHVACGESHSLALSDQGQLFSWGAGSDGQLGLMTIEDSVAVPRLIQKLNQQTILQVSCGN 146

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            H   +   GQ FT G NS    G          P+ V +L+G+P  QV AG   +  L+
Sbjct: 147 WHCLALAADGQFFTWGRNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVVAGGAHSFALS 206

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
           + G V   G N  GQLG  D  DR +P  +  L     VV I+ G  +   +T +G V++
Sbjct: 207 LSGAVFGWGMNNAGQLGLSDEKDRESPCHVK-LLRTQKVVYISCGEEHTAVLTKSGGVFT 265

Query: 293 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA-LDSSGYVYTWGKGY 351
           FG+GS   LGH   +DE+ PR +      G  V +++ G +H +A + SSG +Y +G G 
Sbjct: 266 FGAGSCGQLGHDSMNDEVNPRRV--LELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGA 323

Query: 352 CGALGHGDEIDKTLPEPLS---------------SLKSHLAVQVCARKRKTFVL 390
            G LG G   +   P P+                  K H+  Q+ +   +TFVL
Sbjct: 324 RGQLGTGHTCNVKCPSPVKGYWAAHSGQLSARADRFKYHIVKQIFSGGDQTFVL 377


>gi|321470134|gb|EFX81111.1| hypothetical protein DAPPUDRAFT_50378 [Daphnia pulex]
          Length = 4502

 Score =  132 bits (331), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 97/317 (30%), Positives = 155/317 (48%), Gaps = 9/317 (2%)

Query: 161  SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQ 220
            SA   +Q++  E     +   G+V+  G  +    G       +  P L+E+L+ V  K+
Sbjct: 3645 SALRPIQLAGGEQTLFAITSDGRVYATGYGAGGRLGIGGAES-VTVPSLLESLQHVFVKK 3703

Query: 221  V--TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGP 278
            V   +G      L+  G V++ G    G+LGHG+ L    P+ I  L     VV +A G 
Sbjct: 3704 VAVNSGGKHCLALSSEGEVYSWGEGEDGKLGHGNKLPCDRPRIIESLRG-KDVVDVACGG 3762

Query: 279  SYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
            ++  A+T  G +Y++G G    LGHG+  D+L+P+ ++      +  V   +GD    A+
Sbjct: 3763 AHSAAITALGELYTWGKGRYGRLGHGDSDDQLKPKLVEALLGYRVMDVACGSGDAQTCAI 3822

Query: 339  --DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSV 396
              +  G V++WG G  G LG G      +P  + SL     ++V    + +  L + GSV
Sbjct: 3823 TDEEGGTVWSWGDGDYGKLGRGGSDGCKIPTKIESLSGLGIIKVECGSQFSVALSNNGSV 3882

Query: 397  YGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGD 456
            Y +G   +  LG    GV + V RP+ + +L+   V  ISTG  H VV TD+G ++ +GD
Sbjct: 3883 YTWGKGDYHRLG---HGVDEHVRRPKKVMTLQGKKVISISTGALHCVVCTDQGEVYTWGD 3939

Query: 457  NERAQLGHDTLRGCLEP 473
            N+  QLG  T  G  +P
Sbjct: 3940 NDEGQLGDGTTTGIQKP 3956



 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 100/336 (29%), Positives = 155/336 (46%), Gaps = 15/336 (4%)

Query: 145  GPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGD--NSSFCCGHRDTNR 202
            GP+ ++      +++  +   + V+        V QSG+ + CG+  N     GH   +R
Sbjct: 2713 GPKGSKIKVPQAVDWTVSLQPISVAGGSKSLFLVTQSGKAYACGEGSNGRLGLGH---SR 2769

Query: 203  PIFRPRLVEALKGVPCKQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPK 260
             +  P  + AL     ++V   +G      LT  G V + G    G+LGHGD     TP+
Sbjct: 2770 NVNSPHQITALSQHVVRKVAVHSGGRHALALTADGRVFSWGEGDDGKLGHGDVTSLDTPR 2829

Query: 261  SIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRR 320
             I  L     V  +AAG ++  AVT +G +Y++G G    LGHG+   +L P+ +++   
Sbjct: 2830 CIEALNGF-RVRDVAAGSNHSAAVTSSGELYTWGLGEYGRLGHGDNLTQLTPKRVESL-- 2886

Query: 321  KGIHVVRVSAG--DEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAV 378
             G  VV+VS G  D   +AL   G VY+WG G  G LG G     + P  +  L      
Sbjct: 2887 VGQRVVQVSCGSRDAQTLALVEGGLVYSWGDGDFGKLGRGGSEGCSSPCLVDKLSGLGVC 2946

Query: 379  QVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTG 438
             V    + +  L   G VY +G   +  LG    G    V  P +++ LR   V  +S G
Sbjct: 2947 HVECGAQFSVALTCNGHVYTWGKGDYFRLG---HGSDQHVRWPTLVEGLRGKKVIGVSVG 3003

Query: 439  LYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPT 474
              H + VTD G++F +GDN+  Q G+ ++     PT
Sbjct: 3004 ALHCLAVTDAGQVFAWGDNDHGQQGNGSITVNRRPT 3039



 Score =  116 bits (290), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 85/283 (30%), Positives = 142/283 (50%), Gaps = 13/283 (4%)

Query: 166  VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 225
            V V++   H   +   G+V++ G+      GH +   P  RPR++E+L+G     V  G 
Sbjct: 3704 VAVNSGGKHCLALSSEGEVYSWGEGEDGKLGHGN-KLPCDRPRIIESLRGKDVVDVACGG 3762

Query: 226  NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG-SVVQIA--AGPSYML 282
              +  +T  G ++T G   +G+LGHGD+ D+  PK +  L  +G  V+ +A  +G +   
Sbjct: 3763 AHSAAITALGELYTWGKGRYGRLGHGDSDDQLKPKLVEAL--LGYRVMDVACGSGDAQTC 3820

Query: 283  AVTGN--GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 340
            A+T    G V+S+G G    LG G       P  I++    G+ +++V  G +  VAL +
Sbjct: 3821 AITDEEGGTVWSWGDGDYGKLGRGGSDGCKIPTKIESL--SGLGIIKVECGSQFSVALSN 3878

Query: 341  SGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 400
            +G VYTWGKG    LGHG +     P+ + +L+    + +        V  D G VY +G
Sbjct: 3879 NGSVYTWGKGDYHRLGHGVDEHVRRPKKVMTLQGKKVISISTGALHCVVCTDQGEVYTWG 3938

Query: 401  WMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV 443
                G LG    G +  + +PR++ +L+   ++++S G  HTV
Sbjct: 3939 DNDEGQLG---DGTTTGIQKPRLVAALQNKKINRVSCGSAHTV 3978



 Score =  114 bits (286), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 100/334 (29%), Positives = 150/334 (44%), Gaps = 26/334 (7%)

Query: 124  LLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPS-----AAHVVQ---VSASENHA 175
            L+  +   ++CG    G LG G           +N P      + HVV+   V +   HA
Sbjct: 2745 LVTQSGKAYACGEGSNGRLGLGHSRN-------VNSPHQITALSQHVVRKVAVHSGGRHA 2797

Query: 176  AFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRG 235
              +   G+VF+ G+      GH D    +  PR +EAL G   + V AG N +  +T  G
Sbjct: 2798 LALTADGRVFSWGEGDDGKLGHGDVTS-LDTPRCIEALNGFRVRDVAAGSNHSAAVTSSG 2856

Query: 236  HVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS-VVQIAAGP--SYMLAVTGNGVVYS 292
             ++T G   +G+LGHGD L + TPK +  L  VG  VVQ++ G   +  LA+   G+VYS
Sbjct: 2857 ELYTWGLGEYGRLGHGDNLTQLTPKRVESL--VGQRVVQVSCGSRDAQTLALVEGGLVYS 2914

Query: 293  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 352
            +G G    LG G       P  +      G+ V  V  G +  VAL  +G+VYTWGKG  
Sbjct: 2915 WGDGDFGKLGRGGSEGCSSPCLVDKL--SGLGVCHVECGAQFSVALTCNGHVYTWGKGDY 2972

Query: 353  GALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDR 412
              LGHG +     P  +  L+    + V         + D G V+ +G    G  G    
Sbjct: 2973 FRLGHGSDQHVRWPTLVEGLRGKKVIGVSVGALHCLAVTDAGQVFAWGDNDHGQQG---N 3029

Query: 413  GVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT 446
            G      RP ++  +    +++++ G  H+V  T
Sbjct: 3030 GSITVNRRPTLVQGIDGIKITRVACGSSHSVAWT 3063



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 73/246 (29%), Positives = 122/246 (49%), Gaps = 8/246 (3%)

Query: 235  GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 294
            G ++  G N  GQLG  +      P     L  +  + Q+A G   + A+T +G VY+ G
Sbjct: 3614 GQIYGWGHNHRGQLGGVEGAKVKVPTVCEALSALRPI-QLAGGEQTLFAITSDGRVYATG 3672

Query: 295  SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGA 354
             G+   LG G       P  +++ +   +  V V++G +H +AL S G VY+WG+G  G 
Sbjct: 3673 YGAGGRLGIGGAESVTVPSLLESLQHVFVKKVAVNSGGKHCLALSSEGEVYSWGEGEDGK 3732

Query: 355  LGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGV 414
            LGHG+++    P  + SL+    V V      +  +   G +Y +G   +G LG    G 
Sbjct: 3733 LGHGNKLPCDRPRIIESLRGKDVVDVACGGAHSAAITALGELYTWGKGRYGRLG---HGD 3789

Query: 415  SDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDR--GRLFGFGDNERAQLGHDTLRGC 470
            SD  L+P+++++L  + V  ++  +G   T  +TD   G ++ +GD +  +LG     GC
Sbjct: 3790 SDDQLKPKLVEALLGYRVMDVACGSGDAQTCAITDEEGGTVWSWGDGDYGKLGRGGSDGC 3849

Query: 471  LEPTEI 476
              PT+I
Sbjct: 3850 KIPTKI 3855



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 89/313 (28%), Positives = 135/313 (43%), Gaps = 25/313 (7%)

Query: 93   VLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCV 152
            V   L+S++H    V+  A N   + G++   L S   V+S G    G LGHG     C 
Sbjct: 3689 VPSLLESLQHV--FVKKVAVN---SGGKHCLALSSEGEVYSWGEGEDGKLGHG-NKLPCD 3742

Query: 153  SFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEA 212
                I       VV V+    H+A +   G+++T G       GH D++  + +P+LVEA
Sbjct: 3743 RPRIIESLRGKDVVDVACGGAHSAAITALGELYTWGKGRYGRLGHGDSDDQL-KPKLVEA 3801

Query: 213  LKGVPCKQVTAGLNFTGFLTIR----GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEV 268
            L G     V  G        I     G V + G   +G+LG G +     P  I  L  +
Sbjct: 3802 LLGYRVMDVACGSGDAQTCAITDEEGGTVWSWGDGDYGKLGRGGSDGCKIPTKIESLSGL 3861

Query: 269  GSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRV 328
            G ++++  G  + +A++ NG VY++G G    LGHG      +P+ + T   +G  V+ +
Sbjct: 3862 G-IIKVECGSQFSVALSNNGSVYTWGKGDYHRLGHGVDEHVRRPKKVMTL--QGKKVISI 3918

Query: 329  SAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTF 388
            S G  H V     G VYTWG    G LG G       P  +++L++           K  
Sbjct: 3919 STGALHCVVCTDQGEVYTWGDNDEGQLGDGTTTGIQKPRLVAALQN-----------KKI 3967

Query: 389  VLVDTGSVYGFGW 401
              V  GS +   W
Sbjct: 3968 NRVSCGSAHTVAW 3980



 Score = 95.5 bits (236), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 79/246 (32%), Positives = 116/246 (47%), Gaps = 15/246 (6%)

Query: 119  GRYHTLLISNSSVFSCGSSLCGVLGHGP----ETTQCVSFTRINFPSAAHVVQVSASENH 174
            GR+   L ++  VFS G    G LGHG     +T +C+        +   V  V+A  NH
Sbjct: 2794 GRHALALTADGRVFSWGEGDDGKLGHGDVTSLDTPRCIEAL-----NGFRVRDVAAGSNH 2848

Query: 175  AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 234
            +A V  SG+++T G       GH D N     P+ VE+L G    QV+ G      L + 
Sbjct: 2849 SAAVTSSGELYTWGLGEYGRLGHGD-NLTQLTPKRVESLVGQRVVQVSCGSRDAQTLALV 2907

Query: 235  --GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
              G V++ G    G+LG G +    +P  +  L  +G V  +  G  + +A+T NG VY+
Sbjct: 2908 EGGLVYSWGDGDFGKLGRGGSEGCSSPCLVDKLSGLG-VCHVECGAQFSVALTCNGHVYT 2966

Query: 293  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 352
            +G G  F LGHG       P  ++  R  G  V+ VS G  H +A+  +G V+ WG    
Sbjct: 2967 WGKGDYFRLGHGSDQHVRWPTLVEGLR--GKKVIGVSVGALHCLAVTDAGQVFAWGDNDH 3024

Query: 353  GALGHG 358
            G  G+G
Sbjct: 3025 GQQGNG 3030



 Score = 91.3 bits (225), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 67/239 (28%), Positives = 106/239 (44%), Gaps = 6/239 (2%)

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 296
            V+  G N   QLG         P+++     +  +  +A G   +  VT +G  Y+ G G
Sbjct: 2700 VYVWGLNDKEQLGGPKGSKIKVPQAVDWTVSLQPI-SVAGGSKSLFLVTQSGKAYACGEG 2758

Query: 297  SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 356
            SN  LG G   +   P  I    +  +  V V +G  H +AL + G V++WG+G  G LG
Sbjct: 2759 SNGRLGLGHSRNVNSPHQITALSQHVVRKVAVHSGGRHALALTADGRVFSWGEGDDGKLG 2818

Query: 357  HGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSD 416
            HGD      P  + +L       V A    +  +  +G +Y +G   +G LG  D     
Sbjct: 2819 HGDVTSLDTPRCIEALNGFRVRDVAAGSNHSAAVTSSGELYTWGLGEYGRLGHGDNLTQ- 2877

Query: 417  KVLRPRILDSLRAHHVSQISTGL--YHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEP 473
              L P+ ++SL    V Q+S G     T+ + + G ++ +GD +  +LG     GC  P
Sbjct: 2878 --LTPKRVESLVGQRVVQVSCGSRDAQTLALVEGGLVYSWGDGDFGKLGRGGSEGCSSP 2934


>gi|327268092|ref|XP_003218832.1| PREDICTED: e3 ubiquitin-protein ligase HERC2-like [Anolis
            carolinensis]
          Length = 4839

 Score =  132 bits (331), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 97/328 (29%), Positives = 158/328 (48%), Gaps = 16/328 (4%)

Query: 161  SAAHVVQVSASENHAAFVLQSGQVFTCGD--NSSFCCGHRDTNRPIFRPRLVEALKGVPC 218
            SA +VVQV+        V   G+V+ CG+  N     G      PI  PR + AL     
Sbjct: 2994 SALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGLSSGTVPI--PRQITALSNYVV 3051

Query: 219  KQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA 276
            K+V   +G      LT+ G V + G    G+LGH   ++   P+ I  L+    +  IA 
Sbjct: 3052 KKVAVHSGGRHAMALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALK-TKRIRDIAC 3110

Query: 277  GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEH 334
            G S+  A+T +G +YS+G G    LGHG+   +L+P+ ++     G  V++V+ G  D  
Sbjct: 3111 GSSHSAAITSSGELYSWGLGEYGRLGHGDNTTQLKPKMVKVLL--GHRVIQVACGSRDAQ 3168

Query: 335  VVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 394
             +AL   G V++WG G  G LG G      +P+ +  L      Q+    + +  L  +G
Sbjct: 3169 TLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSG 3228

Query: 395  SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 454
             V+ +G   +  LG    G    V +P++++ LR   +  ++ G  H + VTD G+++ +
Sbjct: 3229 VVWTWGKGDYFRLG---HGTDVHVRKPQVVEGLRGKKIIHVAVGALHCLAVTDTGQVYAW 3285

Query: 455  GDNERAQLGHDTLRGCLEPTEIFIQEME 482
            GDN+  Q G+ T     +PT   +Q +E
Sbjct: 3286 GDNDHGQQGNGTTTVNRKPT--LVQGLE 3311



 Score =  126 bits (316), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 92/288 (31%), Positives = 142/288 (49%), Gaps = 10/288 (3%)

Query: 183  QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 242
            +VF  G N     G    ++ I  P   E L  +   QV  G      +T+ G V+ CG 
Sbjct: 2964 KVFVWGLNDKDQLGGLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGE 3022

Query: 243  NTHGQLGHG-DTLDRPTPKSIAPLEE-VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 300
             T+G+LG G  +   P P+ I  L   V   V + +G  + +A+T +G V+S+G G +  
Sbjct: 3023 ATNGRLGLGLSSGTVPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKVFSWGEGDDGK 3082

Query: 301  LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 360
            LGH  + +  +PR I+  + K I    ++ G  H  A+ SSG +Y+WG G  G LGHGD 
Sbjct: 3083 LGHFSRMNCDKPRLIEALKTKRIR--DIACGSSHSAAITSSGELYSWGLGEYGRLGHGDN 3140

Query: 361  IDKTLPEPLSSLKSHLAVQVC--ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKV 418
              +  P+ +  L  H  +QV   +R  +T  L D G V+ +G   FG LG   RG S+  
Sbjct: 3141 TTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLG---RGGSEGC 3197

Query: 419  LRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDT 466
              P+ ++ L    V QI  G   ++ +T  G ++ +G  +  +LGH T
Sbjct: 3198 NIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGT 3245



 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 84/280 (30%), Positives = 140/280 (50%), Gaps = 9/280 (3%)

Query: 166  VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 225
            V V++   H   +   G+V++ G+      GH + + P  RPR++E+L+G+    + AG 
Sbjct: 4047 VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRS-PCDRPRVIESLRGIEVVDIAAGG 4105

Query: 226  NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA--AGPSYMLA 283
              +  +T  G ++T G   +G+LGHGD+ D+  PK +  L+    V+ IA  +G +  L 
Sbjct: 4106 AHSACITAAGDLYTWGKGRYGRLGHGDSEDQLKPKLVEALQGY-RVIDIACGSGDAQTLC 4164

Query: 284  VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 343
            +T +  V+S+G G    LG G       P  I +    G+ VV+V  G +  VAL  SG 
Sbjct: 4165 LTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL--TGVGVVKVECGSQFSVALTKSGA 4222

Query: 344  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 403
            VYTWGKG    LGHG +     P  +  L+    + +           + G VY +G   
Sbjct: 4223 VYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDND 4282

Query: 404  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV 443
             G LG    G ++ + RPR++ +L+   +++++ G  HT+
Sbjct: 4283 EGQLG---DGTTNAIQRPRLVAALQGKKINRVACGSAHTL 4319



 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 83/269 (30%), Positives = 132/269 (49%), Gaps = 6/269 (2%)

Query: 207  PRLVEALKGVPCKQV--TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP 264
            P L+E+++ V  K+V   +G      L+  G V++ G    G+LGHG+      P+ I  
Sbjct: 4033 PTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIES 4092

Query: 265  LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH 324
            L  +  VV IAAG ++   +T  G +Y++G G    LGHG+  D+L+P+ ++  +   + 
Sbjct: 4093 LRGI-EVVDIAAGGAHSACITAAGDLYTWGKGRYGRLGHGDSEDQLKPKLVEALQGYRVI 4151

Query: 325  VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARK 384
             +   +GD   + L     V++WG G  G LG G      +P  + SL     V+V    
Sbjct: 4152 DIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGVGVVKVECGS 4211

Query: 385  RKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV 444
            + +  L  +G+VY +G   +  LG    G  D V RPR +  L+   V  I+TG  H V 
Sbjct: 4212 QFSVALTKSGAVYTWGKGDYHRLG---HGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 4268

Query: 445  VTDRGRLFGFGDNERAQLGHDTLRGCLEP 473
             T+ G ++ +GDN+  QLG  T      P
Sbjct: 4269 CTEDGEVYTWGDNDEGQLGDGTTNAIQRP 4297



 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 92/311 (29%), Positives = 151/311 (48%), Gaps = 24/311 (7%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V Q++ +E     + ++G+V+T   NS            I  P+LV++L      ++ A 
Sbjct: 454 VTQIACAEKRFLILSRNGRVYTQAYNSD-----------ILGPQLVQSLASRNIVKIAAH 502

Query: 225 LNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGS-VVQIAAGPS 279
            +   +L +   G V + G    G+LGHGDT+    PK I+ L  ++ G  VV IA G +
Sbjct: 503 SDGHHYLALAATGEVFSWGCGDGGRLGHGDTVPLEEPKMISALSGKQAGKHVVHIACGST 562

Query: 280 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS--AGDEHVVA 337
           Y  A+T  G +Y++G G+   LGHG   D+  P  +     KG+ V+ VS  +GD   +A
Sbjct: 563 YSAAITAEGELYTWGRGNYGRLGHGSSEDQTIPMLVTGL--KGLKVIDVSCGSGDAQTLA 620

Query: 338 LDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVY 397
           +  +G V++WG G  G LG G       P+ +  L+    V+V    + +  L   G VY
Sbjct: 621 VTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDIVKVSCGSQFSVALTKDGQVY 680

Query: 398 GFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDN 457
            +G      LG    G  + V  P++L+ L+   V  +  G  H + +T+   ++ +G N
Sbjct: 681 SWGKGDNQRLG---HGTEEHVRYPKLLEGLQGEKVIDVVAGSTHCLALTEDSEVYSWGSN 737

Query: 458 ERAQLGHDTLR 468
           ++ Q   DTLR
Sbjct: 738 DQCQ-HFDTLR 747



 Score =  102 bits (255), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 83/265 (31%), Positives = 126/265 (47%), Gaps = 12/265 (4%)

Query: 96   FLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFT 155
             L+S++H    ++  A N   + G++   L S   V+S G +  G LGHG   + C    
Sbjct: 4035 LLESIQHV--FIKKVAVN---SGGKHCLALSSEGEVYSWGEAEDGKLGHG-NRSPCDRPR 4088

Query: 156  RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 215
             I       VV ++A   H+A +  +G ++T G       GH D+   + +P+LVEAL+G
Sbjct: 4089 VIESLRGIEVVDIAAGGAHSACITAAGDLYTWGKGRYGRLGHGDSEDQL-KPKLVEALQG 4147

Query: 216  VPCKQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
                 +   +G   T  LT    V + G   +G+LG G +     P  I  L  VG VV+
Sbjct: 4148 YRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGVG-VVK 4206

Query: 274  IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
            +  G  + +A+T +G VY++G G    LGHG      +PR +Q    +G  V+ ++ G  
Sbjct: 4207 VECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGL--QGKKVIAIATGSL 4264

Query: 334  HVVALDSSGYVYTWGKGYCGALGHG 358
            H V     G VYTWG    G LG G
Sbjct: 4265 HCVCCTEDGEVYTWGDNDEGQLGDG 4289



 Score = 99.4 bits (246), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 82/283 (28%), Positives = 135/283 (47%), Gaps = 24/283 (8%)

Query: 95  RFLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHG-------PE 147
           + +QS+  S +IV+ +A     + G ++  L +   VFS G    G LGHG       P+
Sbjct: 486 QLVQSLA-SRNIVKIAAH----SDGHHYLALAATGEVFSWGCGDGGRLGHGDTVPLEEPK 540

Query: 148 TTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRP 207
               +S  +    +  HVV ++    ++A +   G+++T G  +    GH  +      P
Sbjct: 541 MISALSGKQ----AGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDQTI-P 595

Query: 208 RLVEALKGVPCKQVTAGLNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL 265
            LV  LKG+    V+ G      L +   G V + G   +G+LG G +    TPK I  L
Sbjct: 596 MLVTGLKGLKVIDVSCGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKL 655

Query: 266 EEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHV 325
           +++  +V+++ G  + +A+T +G VYS+G G N  LGHG +     P+ ++    +G  V
Sbjct: 656 QDL-DIVKVSCGSQFSVALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGL--QGEKV 712

Query: 326 VRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEP 368
           + V AG  H +AL     VY+WG        H D +  T P+P
Sbjct: 713 IDVVAGSTHCLALTEDSEVYSWGSN--DQCQHFDTLRITKPDP 753



 Score = 98.6 bits (244), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 75/247 (30%), Positives = 125/247 (50%), Gaps = 12/247 (4%)

Query: 235  GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
            G ++  G N  GQLG   G  +  PTP +++A L  V    Q+  G   + AVT +G +Y
Sbjct: 3957 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPV----QLIGGEQTLFAVTADGKLY 4012

Query: 292  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 351
            + G G+   LG G       P  +++ +   I  V V++G +H +AL S G VY+WG+  
Sbjct: 4013 ATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAE 4072

Query: 352  CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 411
             G LGHG+      P  + SL+    V + A    +  +   G +Y +G   +G LG   
Sbjct: 4073 DGKLGHGNRSPCDRPRVIESLRGIEVVDIAAGGAHSACITAAGDLYTWGKGRYGRLG--- 4129

Query: 412  RGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG 469
             G S+  L+P+++++L+ + V  I+  +G   T+ +TD   ++ +GD +  +LG     G
Sbjct: 4130 HGDSEDQLKPKLVEALQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDG 4189

Query: 470  CLEPTEI 476
            C  P +I
Sbjct: 4190 CKVPMKI 4196



 Score = 95.9 bits (237), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 75/242 (30%), Positives = 113/242 (46%), Gaps = 7/242 (2%)

Query: 119  GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
            GR+   L  +  VFS G    G LGH      C     I       +  ++   +H+A +
Sbjct: 3060 GRHAMALTVDGKVFSWGEGDDGKLGHF-SRMNCDKPRLIEALKTKRIRDIACGSSHSAAI 3118

Query: 179  LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN--FTGFLTIRGH 236
              SG++++ G       GH D N    +P++V+ L G    QV  G     T  LT  G 
Sbjct: 3119 TSSGELYSWGLGEYGRLGHGD-NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 3177

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 296
            V + G    G+LG G +     P++I  L   G V QI  G  + LA+T +GVV+++G G
Sbjct: 3178 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTWGKG 3236

Query: 297  SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 356
              F LGHG      +P+ ++  R  G  ++ V+ G  H +A+  +G VY WG    G  G
Sbjct: 3237 DYFRLGHGTDVHVRKPQVVEGLR--GKKIIHVAVGALHCLAVTDTGQVYAWGDNDHGQQG 3294

Query: 357  HG 358
            +G
Sbjct: 3295 NG 3296



 Score = 77.4 bits (189), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 59/219 (26%), Positives = 102/219 (46%), Gaps = 21/219 (9%)

Query: 271 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 330
           V QIA      L ++ NG VY+    S          D L P+ +Q+   + I  +   +
Sbjct: 454 VTQIACAEKRFLILSRNGRVYTQAYNS----------DILGPQLVQSLASRNIVKIAAHS 503

Query: 331 GDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLA----VQVCARKRK 386
              H +AL ++G V++WG G  G LGHGD +    P+ +S+L    A    V +      
Sbjct: 504 DGHHYLALAATGEVFSWGCGDGGRLGHGDTVPLEEPKMISALSGKQAGKHVVHIACGSTY 563

Query: 387 TFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVV 444
           +  +   G +Y +G   +G LG    G S+    P ++  L+   V  +S  +G   T+ 
Sbjct: 564 SAAITAEGELYTWGRGNYGRLG---HGSSEDQTIPMLVTGLKGLKVIDVSCGSGDAQTLA 620

Query: 445 VTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQEMEE 483
           VT+ G+++ +GD +  +LG     GC  P    I+++++
Sbjct: 621 VTENGQVWSWGDGDYGKLGRGGSDGCKTPK--LIEKLQD 657



 Score = 66.6 bits (161), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 65/225 (28%), Positives = 100/225 (44%), Gaps = 8/225 (3%)

Query: 116  ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
            I  G  H+  I++S  ++S G    G LGHG  TTQ +    +       V+QV+     
Sbjct: 3108 IACGSSHSAAITSSGELYSWGLGEYGRLGHGDNTTQ-LKPKMVKVLLGHRVIQVACGSRD 3166

Query: 175  AA--FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            A    +   G VF+ GD      G R  +     P+ +E L G    Q+  G  F+  LT
Sbjct: 3167 AQTLALTDEGLVFSWGDGDFGKLG-RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALT 3225

Query: 233  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
              G V T G   + +LGHG  +    P+ +  L     ++ +A G  + LAVT  G VY+
Sbjct: 3226 KSGVVWTWGKGDYFRLGHGTDVHVRKPQVVEGLRG-KKIIHVAVGALHCLAVTDTGQVYA 3284

Query: 293  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
            +G   +   G+G      +P  +Q    +G  + RV+ G  H V+
Sbjct: 3285 WGDNDHGQQGNGTTTVNRKPTLVQGL--EGQKITRVACGSSHSVS 3327



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 49/167 (29%), Positives = 76/167 (45%), Gaps = 4/167 (2%)

Query: 118  TGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
            +G   TL L  + +V+S G    G LG G  +  C    +I+  +   VV+V      + 
Sbjct: 4157 SGDAQTLCLTDDDTVWSWGDGDYGKLGRG-GSDGCKVPMKIDSLTGVGVVKVECGSQFSV 4215

Query: 177  FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
             + +SG V+T G       GH   +  + RPR V+ L+G     +  G       T  G 
Sbjct: 4216 ALTKSGAVYTWGKGDYHRLGHGSDDH-VRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGE 4274

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
            V+T G N  GQLG G T     P+ +A L+    + ++A G ++ LA
Sbjct: 4275 VYTWGDNDEGQLGDGTTNAIQRPRLVAALQG-KKINRVACGSAHTLA 4320



 Score = 52.8 bits (125), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 51/169 (30%), Positives = 77/169 (45%), Gaps = 8/169 (4%)

Query: 118 TGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
           +G   TL ++ N  V+S G    G LG G  +  C +   I       +V+VS     + 
Sbjct: 613 SGDAQTLAVTENGQVWSWGDGDYGKLGRG-GSDGCKTPKLIEKLQDLDIVKVSCGSQFSV 671

Query: 177 FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
            + + GQV++ G   +   GH  T   +  P+L+E L+G     V AG      LT    
Sbjct: 672 ALTKDGQVYSWGKGDNQRLGH-GTEEHVRYPKLLEGLQGEKVIDVVAGSTHCLALTEDSE 730

Query: 237 VHTCGSNTHGQLGHGDTL--DRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
           V++ GSN   Q  H DTL   +P P ++  L+    +V IA GP+   A
Sbjct: 731 VYSWGSNDQCQ--HFDTLRITKPDPTALPGLDS-KHIVGIACGPAQSFA 776



 Score = 52.0 bits (123), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 36/147 (24%), Positives = 71/147 (48%), Gaps = 5/147 (3%)

Query: 332  DEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 391
            D+  ++   SG +Y WG  + G LG  +     +P P  +L +   VQ+   ++  F + 
Sbjct: 3947 DDWTLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVT 4006

Query: 392  DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRG 449
              G +Y     G+G+ G    G ++ V  P +L+S++   + +++  +G  H + ++  G
Sbjct: 4007 ADGKLYA---TGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 4063

Query: 450  RLFGFGDNERAQLGHDTLRGCLEPTEI 476
             ++ +G+ E  +LGH     C  P  I
Sbjct: 4064 EVYSWGEAEDGKLGHGNRSPCDRPRVI 4090



 Score = 45.4 bits (106), Expect = 0.057,   Method: Compositional matrix adjust.
 Identities = 49/184 (26%), Positives = 81/184 (44%), Gaps = 21/184 (11%)

Query: 299  FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG-- 356
            F     E+ D+ +       R+K       ++G E V  + +   V+ WG      LG  
Sbjct: 2929 FLASDNEEEDDDKANTGSLVRKK-------TSGLESVATIRTK--VFVWGLNDKDQLGGL 2979

Query: 357  HGDEID-KTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVS 415
             G +I   +  E LS+L     VQV    +  F +   G VY  G    G LG    G+S
Sbjct: 2980 KGSKIKVPSFSETLSALN---VVQVAGGSKSLFAVTVEGKVYACGEATNGRLGL---GLS 3033

Query: 416  D-KVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLE 472
               V  PR + +L  + V +++  +G  H + +T  G++F +G+ +  +LGH +   C +
Sbjct: 3034 SGTVPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKVFSWGEGDDGKLGHFSRMNCDK 3093

Query: 473  PTEI 476
            P  I
Sbjct: 3094 PRLI 3097


>gi|348527836|ref|XP_003451425.1| PREDICTED: E3 ubiquitin-protein ligase HERC2 [Oreochromis niloticus]
          Length = 4833

 Score =  132 bits (331), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 94/326 (28%), Positives = 161/326 (49%), Gaps = 12/326 (3%)

Query: 161  SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQ 220
            SA +VVQV+        V   G+++ CG+ ++   G   ++  I  PR + AL     K+
Sbjct: 2987 SALNVVQVAGGSKSLFAVTVEGKIYACGEATNGRLGLGLSSGTIPIPRQITALSNYVIKK 3046

Query: 221  VT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGP 278
            V   +G      LT+ G V + G    G+LGH   ++   P+ I  L+    +  IA G 
Sbjct: 3047 VAVHSGGRHAMALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALK-TKRIRDIACGS 3105

Query: 279  SYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEHVV 336
            S+  A+T +G +YS+G G    LGHG+   +L+P+ ++     G  V++V+ G  D   +
Sbjct: 3106 SHSAAITSSGELYSWGLGEYGRLGHGDNTTQLRPKLVKVLL--GHRVIQVACGSRDAQTL 3163

Query: 337  ALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSV 396
            AL   G+V++WG G  G LG G      +P+ +  L      Q+    + +  L  +G V
Sbjct: 3164 ALTDEGFVFSWGDGDFGKLGRGGSEGCNVPQNIERLNGQGVCQIECGAQFSLALTKSGVV 3223

Query: 397  YGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGD 456
            + +G   +  LG    G    V +P++++ LR   +  ++ G  H + VTD G+++ +GD
Sbjct: 3224 WTWGKGDYFRLG---HGTDVHVRKPQMVEGLRGKKIVHVAVGALHCLAVTDTGQVYAWGD 3280

Query: 457  NERAQLGHDTLRGCLEPTEIFIQEME 482
            N+  Q G+ T     +PT   +Q +E
Sbjct: 3281 NDHGQQGNGTTTVNRKPT--LVQGLE 3304



 Score =  125 bits (313), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 91/288 (31%), Positives = 142/288 (49%), Gaps = 10/288 (3%)

Query: 183  QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 242
            +VF  G N     G    ++ I  P   E L  +   QV  G      +T+ G ++ CG 
Sbjct: 2957 KVFVWGLNDKDQLGGLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKIYACGE 3015

Query: 243  NTHGQLGHG-DTLDRPTPKSIAPLEE-VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 300
             T+G+LG G  +   P P+ I  L   V   V + +G  + +A+T +G V+S+G G +  
Sbjct: 3016 ATNGRLGLGLSSGTIPIPRQITALSNYVIKKVAVHSGGRHAMALTVDGKVFSWGEGDDGK 3075

Query: 301  LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 360
            LGH  + +  +PR I+  + K I    ++ G  H  A+ SSG +Y+WG G  G LGHGD 
Sbjct: 3076 LGHFSRMNCDKPRLIEALKTKRIR--DIACGSSHSAAITSSGELYSWGLGEYGRLGHGDN 3133

Query: 361  IDKTLPEPLSSLKSHLAVQVC--ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKV 418
              +  P+ +  L  H  +QV   +R  +T  L D G V+ +G   FG LG   RG S+  
Sbjct: 3134 TTQLRPKLVKVLLGHRVIQVACGSRDAQTLALTDEGFVFSWGDGDFGKLG---RGGSEGC 3190

Query: 419  LRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDT 466
              P+ ++ L    V QI  G   ++ +T  G ++ +G  +  +LGH T
Sbjct: 3191 NVPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGT 3238



 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 83/269 (30%), Positives = 132/269 (49%), Gaps = 6/269 (2%)

Query: 207  PRLVEALKGVPCKQV--TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP 264
            P L+E+++ V  ++V   +G      L+  G V++ G    G+LGHG+      P+ I  
Sbjct: 4027 PTLLESIQHVFIRKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIES 4086

Query: 265  LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH 324
            L  V  VV IAAG ++   +T +G ++++G G    LGHG+  D+L+P+ +   +   + 
Sbjct: 4087 LRGV-EVVDIAAGGAHSACITASGELFTWGKGRYGRLGHGDSEDQLKPKLVDALQGHRVI 4145

Query: 325  VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARK 384
             V   +GD   + L     V++WG G  G LG G      +P  + SL     V+V    
Sbjct: 4146 DVACGSGDAQTLCLTDDDMVWSWGDGDYGKLGRGGSDGCKIPMKIDSLTGLGVVKVECGS 4205

Query: 385  RKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV 444
            + +  L  +G+VY +G   +  LG    G  D V RPR +  L+   V  I+TG  H V 
Sbjct: 4206 QFSVALTKSGAVYTWGKGDYHRLG---HGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 4262

Query: 445  VTDRGRLFGFGDNERAQLGHDTLRGCLEP 473
             T+ G ++ +GDN+  QLG  T      P
Sbjct: 4263 CTEDGEVYTWGDNDEGQLGDGTTNAIQRP 4291



 Score =  122 bits (307), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 93/321 (28%), Positives = 148/321 (46%), Gaps = 29/321 (9%)

Query: 154 FTRINFP------SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRP 207
           +  +N P      S+  V Q+  SE     +  SG V++    S+              P
Sbjct: 427 YANVNGPIQCKALSSLGVTQIVCSEKGFLILSSSGAVYSQNYKST-----------TLAP 475

Query: 208 RLVEALKGVPCKQVTAGLNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL 265
            L+  L      ++ A  +   +L +   G V + G    G+LGHGDT     PK I   
Sbjct: 476 MLIHVLSSRKIVKLAAHPDGQHYLALSSNGEVFSWGCGDGGRLGHGDTTYLEEPKMIGTF 535

Query: 266 --EEVGS-VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKG 322
             ++ G  VV +A G +Y  A+T +G +Y++G G+   LGHG   D+  P  +  F  KG
Sbjct: 536 NGKQAGKHVVHVACGSTYSAAITADGELYTWGRGNYGRLGHGSSEDQTTPMVVTAF--KG 593

Query: 323 IHVVRVS--AGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQV 380
           + VV V+  +GD   +A+  +G V++WG G  G LG G       P+ +  L+    V+V
Sbjct: 594 LKVVDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLVEKLQDLDIVKV 653

Query: 381 CARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLY 440
           C   + +  L   G VY +G      LG    G  + V  P++LDSL+   V  ++ G  
Sbjct: 654 CCGSQFSVALTKDGQVYTWGKGDNQRLG---HGTDEHVRYPKLLDSLQGKKVVDVAVGST 710

Query: 441 HTVVVTDRGRLFGFGDNERAQ 461
           H + +TD G +  +G N++ Q
Sbjct: 711 HCLALTDDGEVLSWGSNDKLQ 731



 Score =  122 bits (307), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 84/280 (30%), Positives = 140/280 (50%), Gaps = 9/280 (3%)

Query: 166  VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 225
            V V++   H   +   G+V++ G+      GH + + P  RPR++E+L+GV    + AG 
Sbjct: 4041 VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRS-PCDRPRVIESLRGVEVVDIAAGG 4099

Query: 226  NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA--AGPSYMLA 283
              +  +T  G + T G   +G+LGHGD+ D+  PK +  L+    V+ +A  +G +  L 
Sbjct: 4100 AHSACITASGELFTWGKGRYGRLGHGDSEDQLKPKLVDALQG-HRVIDVACGSGDAQTLC 4158

Query: 284  VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 343
            +T + +V+S+G G    LG G       P  I +    G+ VV+V  G +  VAL  SG 
Sbjct: 4159 LTDDDMVWSWGDGDYGKLGRGGSDGCKIPMKIDSL--TGLGVVKVECGSQFSVALTKSGA 4216

Query: 344  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 403
            VYTWGKG    LGHG +     P  +  L+    + +           + G VY +G   
Sbjct: 4217 VYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDND 4276

Query: 404  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV 443
             G LG    G ++ + RPR++ +L+   +++++ G  HT+
Sbjct: 4277 EGQLG---DGTTNAIQRPRLVAALQGKKINRVACGSAHTL 4313



 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 66/202 (32%), Positives = 112/202 (55%), Gaps = 9/202 (4%)

Query: 271 VVQIAAGPS--YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTF--RRKGIHVV 326
           +V++AA P   + LA++ NG V+S+G G    LGHG+     +P+ I TF  ++ G HVV
Sbjct: 486 IVKLAAHPDGQHYLALSSNGEVFSWGCGDGGRLGHGDTTYLEEPKMIGTFNGKQAGKHVV 545

Query: 327 RVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVC--ARK 384
            V+ G  +  A+ + G +YTWG+G  G LGHG   D+T P  +++ K    V V   +  
Sbjct: 546 HVACGSTYSAAITADGELYTWGRGNYGRLGHGSSEDQTTPMVVTAFKGLKVVDVACGSGD 605

Query: 385 RKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV 444
            +T  + + G V+ +G   +G LG   RG SD    P++++ L+   + ++  G   +V 
Sbjct: 606 AQTLAVTENGQVWSWGDGDYGKLG---RGGSDGCKTPKLVEKLQDLDIVKVCCGSQFSVA 662

Query: 445 VTDRGRLFGFGDNERAQLGHDT 466
           +T  G+++ +G  +  +LGH T
Sbjct: 663 LTKDGQVYTWGKGDNQRLGHGT 684



 Score =  102 bits (255), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 80/249 (32%), Positives = 120/249 (48%), Gaps = 8/249 (3%)

Query: 113  NMQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSAS 171
             + + +G  H L +S+   V+S G +  G LGHG   + C     I       VV ++A 
Sbjct: 4040 KVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHG-NRSPCDRPRVIESLRGVEVVDIAAG 4098

Query: 172  ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT--AGLNFTG 229
              H+A +  SG++FT G       GH D+   + +P+LV+AL+G     V   +G   T 
Sbjct: 4099 GAHSACITASGELFTWGKGRYGRLGHGDSEDQL-KPKLVDALQGHRVIDVACGSGDAQTL 4157

Query: 230  FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 289
             LT    V + G   +G+LG G +     P  I  L  +G VV++  G  + +A+T +G 
Sbjct: 4158 CLTDDDMVWSWGDGDYGKLGRGGSDGCKIPMKIDSLTGLG-VVKVECGSQFSVALTKSGA 4216

Query: 290  VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 349
            VY++G G    LGHG      +PR +Q    +G  V+ ++ G  H V     G VYTWG 
Sbjct: 4217 VYTWGKGDYHRLGHGSDDHVRRPRQVQGL--QGKKVIAIATGSLHCVCCTEDGEVYTWGD 4274

Query: 350  GYCGALGHG 358
               G LG G
Sbjct: 4275 NDEGQLGDG 4283



 Score = 98.6 bits (244), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 78/242 (32%), Positives = 113/242 (46%), Gaps = 7/242 (2%)

Query: 119  GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
            GR+   L  +  VFS G    G LGH      C     I       +  ++   +H+A +
Sbjct: 3053 GRHAMALTVDGKVFSWGEGDDGKLGHFSRMN-CDKPRLIEALKTKRIRDIACGSSHSAAI 3111

Query: 179  LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN--FTGFLTIRGH 236
              SG++++ G       GH D N    RP+LV+ L G    QV  G     T  LT  G 
Sbjct: 3112 TSSGELYSWGLGEYGRLGHGD-NTTQLRPKLVKVLLGHRVIQVACGSRDAQTLALTDEGF 3170

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 296
            V + G    G+LG G +     P++I  L   G V QI  G  + LA+T +GVV+++G G
Sbjct: 3171 VFSWGDGDFGKLGRGGSEGCNVPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTWGKG 3229

Query: 297  SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 356
              F LGHG      +P+ ++  R  G  +V V+ G  H +A+  +G VY WG    G  G
Sbjct: 3230 DYFRLGHGTDVHVRKPQMVEGLR--GKKIVHVAVGALHCLAVTDTGQVYAWGDNDHGQQG 3287

Query: 357  HG 358
            +G
Sbjct: 3288 NG 3289



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 72/244 (29%), Positives = 121/244 (49%), Gaps = 6/244 (2%)

Query: 235  GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 294
            G ++  G N  GQLG  +      P S   L  +  V Q+  G   + AVT +G +Y+ G
Sbjct: 3951 GTIYGWGHNHRGQLGGIEGAKVKVPTSTEALATLRPV-QLIGGEQTLFAVTADGKLYATG 4009

Query: 295  SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGA 354
             G+   LG G       P  +++ +   I  V V++G +H +AL S G VY+WG+   G 
Sbjct: 4010 YGAGGRLGIGGTESVSTPTLLESIQHVFIRKVAVNSGGKHCLALSSEGEVYSWGEAEDGK 4069

Query: 355  LGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGV 414
            LGHG+      P  + SL+    V + A    +  +  +G ++ +G   +G LG    G 
Sbjct: 4070 LGHGNRSPCDRPRVIESLRGVEVVDIAAGGAHSACITASGELFTWGKGRYGRLG---HGD 4126

Query: 415  SDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLE 472
            S+  L+P+++D+L+ H V  ++  +G   T+ +TD   ++ +GD +  +LG     GC  
Sbjct: 4127 SEDQLKPKLVDALQGHRVIDVACGSGDAQTLCLTDDDMVWSWGDGDYGKLGRGGSDGCKI 4186

Query: 473  PTEI 476
            P +I
Sbjct: 4187 PMKI 4190



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 85/291 (29%), Positives = 130/291 (44%), Gaps = 26/291 (8%)

Query: 119 GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINF----PSAAHVVQVSASENH 174
           G+++  L SN  VFS G    G LGHG +TT       I       +  HVV V+    +
Sbjct: 495 GQHYLALSSNGEVFSWGCGDGGRLGHG-DTTYLEEPKMIGTFNGKQAGKHVVHVACGSTY 553

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI- 233
           +A +   G+++T G  +    GH  +      P +V A KG+    V  G      L + 
Sbjct: 554 SAAITADGELYTWGRGNYGRLGHGSSEDQT-TPMVVTAFKGLKVVDVACGSGDAQTLAVT 612

Query: 234 -RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
             G V + G   +G+LG G +    TPK +  L+++  +V++  G  + +A+T +G VY+
Sbjct: 613 ENGQVWSWGDGDYGKLGRGGSDGCKTPKLVEKLQDL-DIVKVCCGSQFSVALTKDGQVYT 671

Query: 293 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 352
           +G G N  LGHG       P+ + +   +G  VV V+ G  H +AL   G V +WG    
Sbjct: 672 WGKGDNQRLGHGTDEHVRYPKLLDSL--QGKKVVDVAVGSTHCLALTDDGEVLSWGSN-- 727

Query: 353 GALGHGDEI--DKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGW 401
             L H D +  +K  P+ L  L S           K  V +  G    F W
Sbjct: 728 DKLQHFDTLFSNKKQPKALPGLNS-----------KHIVGISCGPGQSFAW 767



 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 67/225 (29%), Positives = 100/225 (44%), Gaps = 8/225 (3%)

Query: 116  ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
            I  G  H+  I++S  ++S G    G LGHG  TTQ +    +       V+QV+     
Sbjct: 3101 IACGSSHSAAITSSGELYSWGLGEYGRLGHGDNTTQ-LRPKLVKVLLGHRVIQVACGSRD 3159

Query: 175  AA--FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            A    +   G VF+ GD      G R  +     P+ +E L G    Q+  G  F+  LT
Sbjct: 3160 AQTLALTDEGFVFSWGDGDFGKLG-RGGSEGCNVPQNIERLNGQGVCQIECGAQFSLALT 3218

Query: 233  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
              G V T G   + +LGHG  +    P+ +  L     +V +A G  + LAVT  G VY+
Sbjct: 3219 KSGVVWTWGKGDYFRLGHGTDVHVRKPQMVEGLRG-KKIVHVAVGALHCLAVTDTGQVYA 3277

Query: 293  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
            +G   +   G+G      +P  +Q    +G  + RV+ G  H VA
Sbjct: 3278 WGDNDHGQQGNGTTTVNRKPTLVQGL--EGQKITRVACGSSHSVA 3320



 Score = 65.9 bits (159), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 54/209 (25%), Positives = 90/209 (43%), Gaps = 19/209 (9%)

Query: 271 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 330
           V QI       L ++ +G VYS     N+      +   L P  I     + I  +    
Sbjct: 444 VTQIVCSEKGFLILSSSGAVYS----QNY------KSTTLAPMLIHVLSSRKIVKLAAHP 493

Query: 331 GDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLA----VQVCARKRK 386
             +H +AL S+G V++WG G  G LGHGD      P+ + +     A    V V      
Sbjct: 494 DGQHYLALSSNGEVFSWGCGDGGRLGHGDTTYLEEPKMIGTFNGKQAGKHVVHVACGSTY 553

Query: 387 TFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVV 444
           +  +   G +Y +G   +G LG    G S+    P ++ + +   V  ++  +G   T+ 
Sbjct: 554 SAAITADGELYTWGRGNYGRLG---HGSSEDQTTPMVVTAFKGLKVVDVACGSGDAQTLA 610

Query: 445 VTDRGRLFGFGDNERAQLGHDTLRGCLEP 473
           VT+ G+++ +GD +  +LG     GC  P
Sbjct: 611 VTENGQVWSWGDGDYGKLGRGGSDGCKTP 639



 Score = 52.8 bits (125), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 49/167 (29%), Positives = 75/167 (44%), Gaps = 4/167 (2%)

Query: 118  TGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
            +G   TL L  +  V+S G    G LG G  +  C    +I+  +   VV+V      + 
Sbjct: 4151 SGDAQTLCLTDDDMVWSWGDGDYGKLGRG-GSDGCKIPMKIDSLTGLGVVKVECGSQFSV 4209

Query: 177  FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
             + +SG V+T G       GH   +  + RPR V+ L+G     +  G       T  G 
Sbjct: 4210 ALTKSGAVYTWGKGDYHRLGHGSDDH-VRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGE 4268

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
            V+T G N  GQLG G T     P+ +A L+    + ++A G ++ LA
Sbjct: 4269 VYTWGDNDEGQLGDGTTNAIQRPRLVAALQG-KKINRVACGSAHTLA 4314


>gi|326668760|ref|XP_686789.5| PREDICTED: e3 ubiquitin-protein ligase HERC2, partial [Danio rerio]
          Length = 3645

 Score =  132 bits (331), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 96/326 (29%), Positives = 160/326 (49%), Gaps = 12/326 (3%)

Query: 161  SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQ 220
            SA +VVQV+        V   G+V+ CG+ ++   G   ++  I  PR + AL     K+
Sbjct: 1799 SALNVVQVAGGSKSLFAVTAEGKVYACGEATNGRLGLGLSSGTIPIPRQISALSNYVVKK 1858

Query: 221  VT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGP 278
            V   +G      LT+ G V + G    G+LGH   ++   P+ I  L+    +  IA G 
Sbjct: 1859 VAVHSGGRHAMALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALK-TKRIRDIACGS 1917

Query: 279  SYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEHVV 336
            S+  A+T +G +YS+G G    LGHG+   +L+P+ ++     G  VV+V+ G  D   +
Sbjct: 1918 SHSAAITSSGELYSWGLGEYGRLGHGDNTTQLRPKLVKVLL--GHRVVQVACGSRDAQTL 1975

Query: 337  ALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSV 396
            AL   G V++WG G  G LG G      +P+ +  L      Q+    + +  L  +G V
Sbjct: 1976 ALTDEGMVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVV 2035

Query: 397  YGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGD 456
            + +G   +  LG    G    V +P++++ LR   +  ++ G  H + VT+ G++F +GD
Sbjct: 2036 WTWGKGDYFRLG---HGTDVHVRKPQMVEGLRGKKIVHVAVGALHCLAVTETGQVFAWGD 2092

Query: 457  NERAQLGHDTLRGCLEPTEIFIQEME 482
            N+  Q G+ T     +PT   +Q +E
Sbjct: 2093 NDHGQQGNGTTTVNRKPT--LVQGLE 2116



 Score =  125 bits (313), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 93/288 (32%), Positives = 142/288 (49%), Gaps = 10/288 (3%)

Query: 183  QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 242
            +VF  G N     G    ++ I  P   E L  +   QV  G      +T  G V+ CG 
Sbjct: 1769 KVFVWGLNDKDQLGGLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTAEGKVYACGE 1827

Query: 243  NTHGQLGHG-DTLDRPTPKSIAPLEE-VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 300
             T+G+LG G  +   P P+ I+ L   V   V + +G  + +A+T +G V+S+G G +  
Sbjct: 1828 ATNGRLGLGLSSGTIPIPRQISALSNYVVKKVAVHSGGRHAMALTVDGKVFSWGEGDDGK 1887

Query: 301  LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 360
            LGH  + +  +PR I+  + K I    ++ G  H  A+ SSG +Y+WG G  G LGHGD 
Sbjct: 1888 LGHFSRMNCDKPRLIEALKTKRIR--DIACGSSHSAAITSSGELYSWGLGEYGRLGHGDN 1945

Query: 361  IDKTLPEPLSSLKSHLAVQVC--ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKV 418
              +  P+ +  L  H  VQV   +R  +T  L D G V+ +G   FG LG   RG S+  
Sbjct: 1946 TTQLRPKLVKVLLGHRVVQVACGSRDAQTLALTDEGMVFSWGDGDFGKLG---RGGSEGC 2002

Query: 419  LRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDT 466
              P+ ++ L    V QI  G   ++ +T  G ++ +G  +  +LGH T
Sbjct: 2003 NIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGT 2050



 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 83/269 (30%), Positives = 133/269 (49%), Gaps = 6/269 (2%)

Query: 207  PRLVEALKGVPCKQV--TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP 264
            P L+E+++ V  ++V   +G      L+  G +++ G    G+LGHG+      P+ I  
Sbjct: 2839 PTLLESIQHVFIRKVAVNSGGKHCLALSSEGELYSWGEAEDGKLGHGNRSPCDRPRVIES 2898

Query: 265  LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH 324
            L  V  VV IAAG ++   +T +G +Y++G G    LGHG+  D+L+P+ ++  +   + 
Sbjct: 2899 LRGV-EVVDIAAGGAHSACITASGELYTWGKGRYGRLGHGDSEDQLKPKLVEALQGHRVI 2957

Query: 325  VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARK 384
             V   +GD   + L     V++WG G  G LG G      +P  + SL     V+V    
Sbjct: 2958 DVACGSGDAQTLCLTDDDMVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGS 3017

Query: 385  RKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV 444
            + +  L  +G+VY +G   +  LG    G  D V RPR +  L+   V  I+TG  H V 
Sbjct: 3018 QFSVALTKSGAVYTWGKGDYHRLG---HGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 3074

Query: 445  VTDRGRLFGFGDNERAQLGHDTLRGCLEP 473
             T+ G ++ +GDN+  QLG  T      P
Sbjct: 3075 CTEDGEVYTWGDNDEGQLGDGTTNAIQRP 3103



 Score =  122 bits (307), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 83/280 (29%), Positives = 141/280 (50%), Gaps = 9/280 (3%)

Query: 166  VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 225
            V V++   H   +   G++++ G+      GH + + P  RPR++E+L+GV    + AG 
Sbjct: 2853 VAVNSGGKHCLALSSEGELYSWGEAEDGKLGHGNRS-PCDRPRVIESLRGVEVVDIAAGG 2911

Query: 226  NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA--AGPSYMLA 283
              +  +T  G ++T G   +G+LGHGD+ D+  PK +  L+    V+ +A  +G +  L 
Sbjct: 2912 AHSACITASGELYTWGKGRYGRLGHGDSEDQLKPKLVEALQG-HRVIDVACGSGDAQTLC 2970

Query: 284  VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 343
            +T + +V+S+G G    LG G       P  I +    G+ VV+V  G +  VAL  SG 
Sbjct: 2971 LTDDDMVWSWGDGDYGKLGRGGSDGCKVPMKIDSL--TGLGVVKVECGSQFSVALTKSGA 3028

Query: 344  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 403
            VYTWGKG    LGHG +     P  +  L+    + +           + G VY +G   
Sbjct: 3029 VYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDND 3088

Query: 404  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV 443
             G LG    G ++ + RPR++ +L+   +++++ G  HT+
Sbjct: 3089 EGQLG---DGTTNAIQRPRLVAALQGKKINRVACGSAHTL 3125



 Score = 99.0 bits (245), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 74/247 (29%), Positives = 126/247 (51%), Gaps = 12/247 (4%)

Query: 235  GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
            G ++  G N  GQLG   G  +  PTP +++A L  V    Q+  G   + AVT +G +Y
Sbjct: 2763 GTIYGWGHNHRGQLGGIEGAKVKVPTPTEALATLRPV----QLIGGEQTLFAVTADGKLY 2818

Query: 292  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 351
            + G G+   LG G       P  +++ +   I  V V++G +H +AL S G +Y+WG+  
Sbjct: 2819 ATGYGAGGRLGIGGTESVSTPTLLESIQHVFIRKVAVNSGGKHCLALSSEGELYSWGEAE 2878

Query: 352  CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 411
             G LGHG+      P  + SL+    V + A    +  +  +G +Y +G   +G LG   
Sbjct: 2879 DGKLGHGNRSPCDRPRVIESLRGVEVVDIAAGGAHSACITASGELYTWGKGRYGRLG--- 2935

Query: 412  RGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG 469
             G S+  L+P+++++L+ H V  ++  +G   T+ +TD   ++ +GD +  +LG     G
Sbjct: 2936 HGDSEDQLKPKLVEALQGHRVIDVACGSGDAQTLCLTDDDMVWSWGDGDYGKLGRGGSDG 2995

Query: 470  CLEPTEI 476
            C  P +I
Sbjct: 2996 CKVPMKI 3002



 Score = 96.7 bits (239), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 77/242 (31%), Positives = 113/242 (46%), Gaps = 7/242 (2%)

Query: 119  GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
            GR+   L  +  VFS G    G LGH      C     I       +  ++   +H+A +
Sbjct: 1865 GRHAMALTVDGKVFSWGEGDDGKLGHF-SRMNCDKPRLIEALKTKRIRDIACGSSHSAAI 1923

Query: 179  LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN--FTGFLTIRGH 236
              SG++++ G       GH D N    RP+LV+ L G    QV  G     T  LT  G 
Sbjct: 1924 TSSGELYSWGLGEYGRLGHGD-NTTQLRPKLVKVLLGHRVVQVACGSRDAQTLALTDEGM 1982

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 296
            V + G    G+LG G +     P++I  L   G V QI  G  + LA+T +GVV+++G G
Sbjct: 1983 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTWGKG 2041

Query: 297  SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 356
              F LGHG      +P+ ++  R  G  +V V+ G  H +A+  +G V+ WG    G  G
Sbjct: 2042 DYFRLGHGTDVHVRKPQMVEGLR--GKKIVHVAVGALHCLAVTETGQVFAWGDNDHGQQG 2099

Query: 357  HG 358
            +G
Sbjct: 2100 NG 2101



 Score = 68.9 bits (167), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 72/284 (25%), Positives = 115/284 (40%), Gaps = 60/284 (21%)

Query: 113  NMQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSAS 171
             + + +G  H L +S+   ++S G +  G LGHG   + C     I       VV ++A 
Sbjct: 2852 KVAVNSGGKHCLALSSEGELYSWGEAEDGKLGHG-NRSPCDRPRVIESLRGVEVVDIAAG 2910

Query: 172  ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG---------------- 215
              H+A +  SG+++T G       GH D+   + +P+LVEAL+G                
Sbjct: 2911 GAHSACITASGELYTWGKGRYGRLGHGDSEDQL-KPKLVEALQGHRVIDVACGSGDAQTL 2969

Query: 216  ----------------------------VPCK----------QVTAGLNFTGFLTIRGHV 237
                                        VP K          +V  G  F+  LT  G V
Sbjct: 2970 CLTDDDMVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAV 3029

Query: 238  HTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 297
            +T G   + +LGHG       P+ +  L+    V+ IA G  + +  T +G VY++G   
Sbjct: 3030 YTWGKGDYHRLGHGSDDHVRRPRQVQGLQG-KKVIAIATGSLHCVCCTEDGEVYTWGDND 3088

Query: 298  NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 341
               LG G  +   +PR +   + K I+  RV+ G  H +A  +S
Sbjct: 3089 EGQLGDGTTNAIQRPRLVAALQGKKIN--RVACGSAHTLAWSTS 3130



 Score = 66.6 bits (161), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 67/225 (29%), Positives = 100/225 (44%), Gaps = 8/225 (3%)

Query: 116  ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
            I  G  H+  I++S  ++S G    G LGHG  TTQ +    +       VVQV+     
Sbjct: 1913 IACGSSHSAAITSSGELYSWGLGEYGRLGHGDNTTQ-LRPKLVKVLLGHRVVQVACGSRD 1971

Query: 175  AA--FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            A    +   G VF+ GD      G R  +     P+ +E L G    Q+  G  F+  LT
Sbjct: 1972 AQTLALTDEGMVFSWGDGDFGKLG-RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALT 2030

Query: 233  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
              G V T G   + +LGHG  +    P+ +  L     +V +A G  + LAVT  G V++
Sbjct: 2031 KSGVVWTWGKGDYFRLGHGTDVHVRKPQMVEGLRG-KKIVHVAVGALHCLAVTETGQVFA 2089

Query: 293  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
            +G   +   G+G      +P  +Q    +G  + RV+ G  H VA
Sbjct: 2090 WGDNDHGQQGNGTTTVNRKPTLVQGL--EGQKITRVACGSSHSVA 2132



 Score = 53.1 bits (126), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 37/147 (25%), Positives = 71/147 (48%), Gaps = 5/147 (3%)

Query: 332  DEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 391
            D+  ++   SG +Y WG  + G LG  +     +P P  +L +   VQ+   ++  F + 
Sbjct: 2753 DDWTLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPTEALATLRPVQLIGGEQTLFAVT 2812

Query: 392  DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRG 449
              G +Y     G+G+ G    G ++ V  P +L+S++   + +++  +G  H + ++  G
Sbjct: 2813 ADGKLYA---TGYGAGGRLGIGGTESVSTPTLLESIQHVFIRKVAVNSGGKHCLALSSEG 2869

Query: 450  RLFGFGDNERAQLGHDTLRGCLEPTEI 476
             L+ +G+ E  +LGH     C  P  I
Sbjct: 2870 ELYSWGEAEDGKLGHGNRSPCDRPRVI 2896



 Score = 45.1 bits (105), Expect = 0.087,   Method: Compositional matrix adjust.
 Identities = 40/139 (28%), Positives = 65/139 (46%), Gaps = 12/139 (8%)

Query: 344  VYTWGKGYCGALG--HGDEID-KTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 400
            V+ WG      LG   G +I   +  E LS+L     VQV    +  F +   G VY  G
Sbjct: 1770 VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALN---VVQVAGGSKSLFAVTAEGKVYACG 1826

Query: 401  WMGFGSLGFPDRGVSDKVLR-PRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDN 457
                G LG    G+S   +  PR + +L  + V +++  +G  H + +T  G++F +G+ 
Sbjct: 1827 EATNGRLGL---GLSSGTIPIPRQISALSNYVVKKVAVHSGGRHAMALTVDGKVFSWGEG 1883

Query: 458  ERAQLGHDTLRGCLEPTEI 476
            +  +LGH +   C +P  I
Sbjct: 1884 DDGKLGHFSRMNCDKPRLI 1902


>gi|157127963|ref|XP_001661249.1| hect E3 ubiquitin ligase [Aedes aegypti]
 gi|108882309|gb|EAT46534.1| AAEL002306-PA [Aedes aegypti]
          Length = 4837

 Score =  132 bits (331), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 83/245 (33%), Positives = 134/245 (54%), Gaps = 8/245 (3%)

Query: 235  GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEE-VGSVVQIAAGPSYMLAVTGNGVVYSF 293
            G ++ CG  T+G+LG G   + PTP+ +  L + V   V + +G  + +A+T +G V+S+
Sbjct: 2944 GKLYACGEGTNGRLGLGHNNNVPTPRQVPILNQYVVKKVAVHSGGKHAMALTLDGKVFSW 3003

Query: 294  GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 353
            G G +  LGHG +    +P+ I++ R K   V  ++ G  H  A+ SSG +YTWG G  G
Sbjct: 3004 GEGEDGKLGHGNRLTLEKPKLIESLRTK--RVRDIACGSSHSAAITSSGELYTWGLGEYG 3061

Query: 354  ALGHGDEIDKTLPEPLSSLKSHLAVQVC--ARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 411
             LGHGD   +  P+ +++L+ H  VQV   +R  +T  L + G V+ +G   FG LG   
Sbjct: 3062 RLGHGDNCTQLKPKLVTTLQGHRVVQVACGSRDAQTLCLTEEGLVFSWGDGDFGKLG--- 3118

Query: 412  RGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCL 471
            RG S+    P  ++ L +  V QI  G   ++ +T  G ++ +G  +  +LGH T +   
Sbjct: 3119 RGGSEGCSVPHQVERLNSVGVMQIECGAQFSLALTKSGEVWTWGKGDYYRLGHGTDQHVR 3178

Query: 472  EPTEI 476
            +PT I
Sbjct: 3179 KPTPI 3183



 Score =  129 bits (324), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 97/329 (29%), Positives = 155/329 (47%), Gaps = 17/329 (5%)

Query: 155  TRINFPSAAHV------VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPR 208
            +RI  P+          +Q++  E     V   G+++  G  +    G   T+  +  P 
Sbjct: 3956 SRIKMPTPCEALSLLRPIQIAGGEQTLYAVTPDGKLYATGYGAGGRLGIGGTDS-VSAPT 4014

Query: 209  LVEALKGVPCKQV--TAGLNFTGFLTIRGHVHTCGSNTHGQLGHG--DTLDRPTPKSIAP 264
            LVE+L+ V  K+V   +G      L+  G V + G    G+LGHG  D+ DRP  K I  
Sbjct: 4015 LVESLQHVIIKKVAVNSGGKHCLALSSDGEVFSWGEGEDGKLGHGNRDSYDRP--KLIEA 4072

Query: 265  LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH 324
            L  +G V+ IA G ++   +T  G V ++G G    LGHG+  D+LQP+ ++        
Sbjct: 4073 LSGIG-VIDIACGSAHSACITSQGHVLTWGKGRYGRLGHGDSEDQLQPKLVEALLGYRAI 4131

Query: 325  VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARK 384
             +   +GD   + +     V++WG G  G LG G      +P  + SL     ++V    
Sbjct: 4132 DIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKIPMKIESLAGLGVIKVECGS 4191

Query: 385  RKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV 444
            + +  L  +GSVY +G   +  LG    G +D V RP+ + +L+   +  I+TG  H V 
Sbjct: 4192 QFSVALTRSGSVYTWGKGDYHRLG---HGNTDHVRRPKKVAALQGKKIISIATGSLHCVA 4248

Query: 445  VTDRGRLFGFGDNERAQLGHDTLRGCLEP 473
             +D G +F +GDN+  QLG  T+     P
Sbjct: 4249 CSDSGEVFTWGDNDEGQLGDGTVTAIQRP 4277



 Score =  129 bits (324), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 94/321 (29%), Positives = 151/321 (47%), Gaps = 21/321 (6%)

Query: 155  TRINFPSAAHV------VQVSASENHAAFVLQSGQVFTCGD--NSSFCCGHRDTNRPIFR 206
            +++  P+ + V      + ++        V Q G+++ CG+  N     GH   N  +  
Sbjct: 2911 SKVKLPTYSSVLSQLKPIHIAGGSKSLFIVSQDGKLYACGEGTNGRLGLGH---NNNVPT 2967

Query: 207  PRLVEALKGVPCKQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP 264
            PR V  L     K+V   +G      LT+ G V + G    G+LGHG+ L    PK I  
Sbjct: 2968 PRQVPILNQYVVKKVAVHSGGKHAMALTLDGKVFSWGEGEDGKLGHGNRLTLEKPKLIES 3027

Query: 265  LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH 324
            L     V  IA G S+  A+T +G +Y++G G    LGHG+   +L+P+ + T   +G  
Sbjct: 3028 LR-TKRVRDIACGSSHSAAITSSGELYTWGLGEYGRLGHGDNCTQLKPKLVTTL--QGHR 3084

Query: 325  VVRVSAG--DEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCA 382
            VV+V+ G  D   + L   G V++WG G  G LG G     ++P  +  L S   +Q+  
Sbjct: 3085 VVQVACGSRDAQTLCLTEEGLVFSWGDGDFGKLGRGGSEGCSVPHQVERLNSVGVMQIEC 3144

Query: 383  RKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHT 442
              + +  L  +G V+ +G   +  LG    G    V +P  +  LR   V  ++ G  H 
Sbjct: 3145 GAQFSLALTKSGEVWTWGKGDYYRLG---HGTDQHVRKPTPIQGLRGKKVIHVAVGALHC 3201

Query: 443  VVVTDRGRLFGFGDNERAQLG 463
            + VTD G+++ +GDN+  Q G
Sbjct: 3202 LAVTDSGQVYAWGDNDHGQQG 3222



 Score =  125 bits (315), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 86/283 (30%), Positives = 141/283 (49%), Gaps = 9/283 (3%)

Query: 166  VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIF-RPRLVEALKGVPCKQVTAG 224
            V V++   H   +   G+VF+ G+      GH   NR  + RP+L+EAL G+    +  G
Sbjct: 4027 VAVNSGGKHCLALSSDGEVFSWGEGEDGKLGH--GNRDSYDRPKLIEALSGIGVIDIACG 4084

Query: 225  LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSV-VQIAAGPSYMLA 283
               +  +T +GHV T G   +G+LGHGD+ D+  PK +  L    ++ +   +G +  L 
Sbjct: 4085 SAHSACITSQGHVLTWGKGRYGRLGHGDSEDQLQPKLVEALLGYRAIDIACGSGDAQTLC 4144

Query: 284  VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 343
            +T +  V+S+G G    LG G       P  I++    G+ V++V  G +  VAL  SG 
Sbjct: 4145 ITDDDNVWSWGDGDYGKLGRGGSDGCKIPMKIESL--AGLGVIKVECGSQFSVALTRSGS 4202

Query: 344  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 403
            VYTWGKG    LGHG+      P+ +++L+    + +           D+G V+ +G   
Sbjct: 4203 VYTWGKGDYHRLGHGNTDHVRRPKKVAALQGKKIISIATGSLHCVACSDSGEVFTWGDND 4262

Query: 404  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT 446
             G LG    G    + RPR++ SL+  H+ ++  G  HT+ ++
Sbjct: 4263 EGQLG---DGTVTAIQRPRLVQSLQGKHIVKVICGSAHTLALS 4302



 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 99/361 (27%), Positives = 163/361 (45%), Gaps = 25/361 (6%)

Query: 111 AGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPE-TTQCV------SFTRINFPSAA 163
           AGN      +  +  I      SC   + G +      TTQ +      S   I  PS  
Sbjct: 464 AGNYSTKVNKSKSQKIFTLGWSSCSPEMYGFMSEATNGTTQLMGSIPRYSAATIELPSTL 523

Query: 164 HVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTA 223
            V QV+ +EN+   +   GQVF+   NSS              P+  E L+GV   Q+ A
Sbjct: 524 QVRQVACTENNIYILTTGGQVFSLHSNSS----------ENIAPKAFEGLEGVHVVQIAA 573

Query: 224 GL--NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 281
                    L+    V + G+   G+LGHGDT+ +  P  I  L E   V  I  G SY 
Sbjct: 574 HCEGKHVMVLSSANEVWSWGAGDGGRLGHGDTVSKEHPTMIVGLHE-KQVCGIYCGASYS 632

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 341
            A+T  G ++++G G+   LGHG   D+L P  +Q  +   +  V + +GD H + +  +
Sbjct: 633 AAITIAGELFTWGRGTYGRLGHGNSDDKLVPTQVQALKSYKVVDVALGSGDAHSMCVTDN 692

Query: 342 GYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGW 401
           G ++ WG G  G LG+G      +P  + +L +    ++ +  + +  L   G++Y +G 
Sbjct: 693 GLLFAWGDGDFGKLGNGSCNGSPIPVQIDTLVN--VSRIYSGSQFSVALSCDGTLYTWGK 750

Query: 402 MGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQ 461
              G LG    G S+    P+++ +L    ++ ++ G  H + +T  G L+G+G N+  Q
Sbjct: 751 GHGGRLG---HGNSEHSNVPKLVRALEGKKIADVAVGSAHCLALTSSGELYGWGRNDYQQ 807

Query: 462 L 462
           +
Sbjct: 808 I 808



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 94/344 (27%), Positives = 156/344 (45%), Gaps = 31/344 (9%)

Query: 114  MQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHV------- 165
            + I  G     ++S +  +++CG    G LG G            N P+   V       
Sbjct: 2928 IHIAGGSKSLFIVSQDGKLYACGEGTNGRLGLGHNN---------NVPTPRQVPILNQYV 2978

Query: 166  ---VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNR-PIFRPRLVEALKGVPCKQV 221
               V V +   HA  +   G+VF+ G+      GH   NR  + +P+L+E+L+    + +
Sbjct: 2979 VKKVAVHSGGKHAMALTLDGKVFSWGEGEDGKLGH--GNRLTLEKPKLIESLRTKRVRDI 3036

Query: 222  TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGP--S 279
              G + +  +T  G ++T G   +G+LGHGD   +  PK +  L+    VVQ+A G   +
Sbjct: 3037 ACGSSHSAAITSSGELYTWGLGEYGRLGHGDNCTQLKPKLVTTLQG-HRVVQVACGSRDA 3095

Query: 280  YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 339
              L +T  G+V+S+G G    LG G       P  ++  R   + V+++  G +  +AL 
Sbjct: 3096 QTLCLTEEGLVFSWGDGDFGKLGRGGSEGCSVPHQVE--RLNSVGVMQIECGAQFSLALT 3153

Query: 340  SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGF 399
             SG V+TWGKG    LGHG +     P P+  L+    + V         + D+G VY +
Sbjct: 3154 KSGEVWTWGKGDYYRLGHGTDQHVRKPTPIQGLRGKKVIHVAVGALHCLAVTDSGQVYAW 3213

Query: 400  GWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV 443
            G    G  G  +  V+ K   P ++  L    V++++ G  H+V
Sbjct: 3214 GDNDHGQQGSGNTVVNKK---PNLVLGLDGVFVNRVACGSSHSV 3254



 Score =  105 bits (262), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 70/248 (28%), Positives = 122/248 (49%), Gaps = 10/248 (4%)

Query: 233  IRGHVHTCGSNTHGQLG--HGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 290
            I   V   G N   QLG   G  +  PT  S+  L ++  +  IA G   +  V+ +G +
Sbjct: 2890 ISSKVLVWGLNDKEQLGGLKGSKVKLPTYSSV--LSQLKPI-HIAGGSKSLFIVSQDGKL 2946

Query: 291  YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKG 350
            Y+ G G+N  LG G  ++   PR +    +  +  V V +G +H +AL   G V++WG+G
Sbjct: 2947 YACGEGTNGRLGLGHNNNVPTPRQVPILNQYVVKKVAVHSGGKHAMALTLDGKVFSWGEG 3006

Query: 351  YCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFP 410
              G LGHG+ +    P+ + SL++     +      +  +  +G +Y +G   +G LG  
Sbjct: 3007 EDGKLGHGNRLTLEKPKLIESLRTKRVRDIACGSSHSAAITSSGELYTWGLGEYGRLGHG 3066

Query: 411  DRGVSDKVLRPRILDSLRAHHVSQISTGL--YHTVVVTDRGRLFGFGDNERAQLGHDTLR 468
            D       L+P+++ +L+ H V Q++ G     T+ +T+ G +F +GD +  +LG     
Sbjct: 3067 DNCTQ---LKPKLVTTLQGHRVVQVACGSRDAQTLCLTEEGLVFSWGDGDFGKLGRGGSE 3123

Query: 469  GCLEPTEI 476
            GC  P ++
Sbjct: 3124 GCSVPHQV 3131



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 87/300 (29%), Positives = 135/300 (45%), Gaps = 18/300 (6%)

Query: 96   FLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFT 155
             ++S++H   I++  A N   + G++   L S+  VFS G    G LGHG       S+ 
Sbjct: 4015 LVESLQHV--IIKKVAVN---SGGKHCLALSSDGEVFSWGEGEDGKLGHGNRD----SYD 4065

Query: 156  R---INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEA 212
            R   I   S   V+ ++    H+A +   G V T G       GH D+   + +P+LVEA
Sbjct: 4066 RPKLIEALSGIGVIDIACGSAHSACITSQGHVLTWGKGRYGRLGHGDSEDQL-QPKLVEA 4124

Query: 213  LKGVPCKQVTAGLNFTGFLTIRG--HVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS 270
            L G     +  G      L I    +V + G   +G+LG G +     P  I  L  +G 
Sbjct: 4125 LLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKIPMKIESLAGLG- 4183

Query: 271  VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 330
            V+++  G  + +A+T +G VY++G G    LGHG      +P+ +     +G  ++ ++ 
Sbjct: 4184 VIKVECGSQFSVALTRSGSVYTWGKGDYHRLGHGNTDHVRRPKKVAAL--QGKKIISIAT 4241

Query: 331  GDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVL 390
            G  H VA   SG V+TWG    G LG G       P  + SL+    V+V      T  L
Sbjct: 4242 GSLHCVACSDSGEVFTWGDNDEGQLGDGTVTAIQRPRLVQSLQGKHIVKVICGSAHTLAL 4301



 Score = 89.7 bits (221), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 70/241 (29%), Positives = 120/241 (49%), Gaps = 12/241 (4%)

Query: 241  GSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 297
            G N  GQLG   G  +  PTP ++++ L  +    QIA G   + AVT +G +Y+ G G+
Sbjct: 3943 GHNHRGQLGGLDGSRIKMPTPCEALSLLRPI----QIAGGEQTLYAVTPDGKLYATGYGA 3998

Query: 298  NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 357
               LG G       P  +++ +   I  V V++G +H +AL S G V++WG+G  G LGH
Sbjct: 3999 GGRLGIGGTDSVSAPTLVESLQHVIIKKVAVNSGGKHCLALSSDGEVFSWGEGEDGKLGH 4058

Query: 358  GDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDK 417
            G+      P+ + +L     + +      +  +   G V  +G   +G LG  D   S+ 
Sbjct: 4059 GNRDSYDRPKLIEALSGIGVIDIACGSAHSACITSQGHVLTWGKGRYGRLGHGD---SED 4115

Query: 418  VLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTE 475
             L+P+++++L  +    I+  +G   T+ +TD   ++ +GD +  +LG     GC  P +
Sbjct: 4116 QLQPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKIPMK 4175

Query: 476  I 476
            I
Sbjct: 4176 I 4176



 Score = 86.7 bits (213), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 64/222 (28%), Positives = 108/222 (48%), Gaps = 15/222 (6%)

Query: 259 PKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTF 318
           P+  A   E+ S +Q+       +A T N +      G  F L H    + + P+A +  
Sbjct: 510 PRYSAATIELPSTLQV-----RQVACTENNIYILTTGGQVFSL-HSNSSENIAPKAFEGL 563

Query: 319 RRKGIHVVRVSAGDE--HVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHL 376
             +G+HVV+++A  E  HV+ L S+  V++WG G  G LGHGD + K  P  +  L    
Sbjct: 564 --EGVHVVQIAAHCEGKHVMVLSSANEVWSWGAGDGGRLGHGDTVSKEHPTMIVGLHEKQ 621

Query: 377 AVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS 436
              +      +  +   G ++ +G   +G LG    G SD  L P  + +L+++ V  ++
Sbjct: 622 VCGIYCGASYSAAITIAGELFTWGRGTYGRLG---HGNSDDKLVPTQVQALKSYKVVDVA 678

Query: 437 --TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 476
             +G  H++ VTD G LF +GD +  +LG+ +  G   P +I
Sbjct: 679 LGSGDAHSMCVTDNGLLFAWGDGDFGKLGNGSCNGSPIPVQI 720


>gi|242089177|ref|XP_002440421.1| hypothetical protein SORBIDRAFT_09g000710 [Sorghum bicolor]
 gi|241945706|gb|EES18851.1| hypothetical protein SORBIDRAFT_09g000710 [Sorghum bicolor]
          Length = 916

 Score =  132 bits (331), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 100/329 (30%), Positives = 152/329 (46%), Gaps = 21/329 (6%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V  V     HAA V+++G+VFT G++S    GH  T     RPRLVE+L       V  G
Sbjct: 79  VYHVDCGVKHAALVMKNGEVFTWGEDSGGRLGH-GTREDCVRPRLVESLTVSNVDFVACG 137

Query: 225 LNFTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 282
              T  +T  G +++ G  TH  G LGHG+ +    PK ++   E   V  ++ G  +  
Sbjct: 138 EFHTCAVTTTGELYSWGDGTHNVGLLGHGNDVGHWIPKRVSGALEGLQVAYVSCGTWHTA 197

Query: 283 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD--- 339
            +T  G +++FG GS   LGHG+      PR +++    G+  + V+ G  H  A+    
Sbjct: 198 LITSMGQLFTFGDGSFGVLGHGDLKSVSYPREVESL--SGLKTIAVACGVWHTAAIVEVI 255

Query: 340 ----------SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFV 389
                     S+G ++TWG G    LGHGD+  +  P  +++L  H   +V      T  
Sbjct: 256 VTRSSSSVKLSAGKLFTWGDGDKHRLGHGDKETRLKPTCVATLIDHDFYRVACGHSLTVA 315

Query: 390 LVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRG 449
           L  +G V   G   +G LG P    SD  +   + D +    V QI+ G YH  V+T R 
Sbjct: 316 LTTSGQVLSMGNAVYGQLGNPH---SDGRIPCLVEDKIVGEQVIQIACGSYHVAVLTGRN 372

Query: 450 RLFGFGDNERAQLGHDTLRGCLEPTEIFI 478
            +F +G     +LGH  +     PT + +
Sbjct: 373 EVFTWGKGANGRLGHGDIEDRKVPTLVEV 401



 Score = 93.2 bits (230), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 81/275 (29%), Positives = 120/275 (43%), Gaps = 22/275 (8%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSL--CGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +  G +HT  ++ +  ++S G      G+LGHG +    +            V  VS   
Sbjct: 134 VACGEFHTCAVTTTGELYSWGDGTHNVGLLGHGNDVGHWIPKRVSGALEGLQVAYVSCGT 193

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            H A +   GQ+FT GD S    GH D  + +  PR VE+L G+    V  G+  T  + 
Sbjct: 194 WHTALITSMGQLFTFGDGSFGVLGHGDL-KSVSYPREVESLSGLKTIAVACGVWHTAAIV 252

Query: 233 -------------IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPS 279
                          G + T G     +LGHGD   R  P  +A L +     ++A G S
Sbjct: 253 EVIVTRSSSSVKLSAGKLFTWGDGDKHRLGHGDKETRLKPTCVATLID-HDFYRVACGHS 311

Query: 280 YMLAVTGNGVVYSFGSGSNFCLGH-GEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
             +A+T +G V S G   N   G  G  H + +   +   +  G  V++++ G  HV  L
Sbjct: 312 LTVALTTSGQVLSMG---NAVYGQLGNPHSDGRIPCLVEDKIVGEQVIQIACGSYHVAVL 368

Query: 339 DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
                V+TWGKG  G LGHGD  D+ +P  +  LK
Sbjct: 369 TGRNEVFTWGKGANGRLGHGDIEDRKVPTLVEVLK 403



 Score = 89.0 bits (219), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 80/276 (28%), Positives = 129/276 (46%), Gaps = 20/276 (7%)

Query: 204 IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 263
           I  P+ +E+   +    V  G+     +   G V T G ++ G+LGHG   D   P+ + 
Sbjct: 65  ILLPKPLESNLVLDVYHVDCGVKHAALVMKNGEVFTWGEDSGGRLGHGTREDCVRPRLVE 124

Query: 264 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC--LGHGEQHDELQPRAIQTFRRK 321
            L  V +V  +A G  +  AVT  G +YS+G G++    LGHG       P+ + +   +
Sbjct: 125 SL-TVSNVDFVACGEFHTCAVTTTGELYSWGDGTHNVGLLGHGNDVGHWIPKRV-SGALE 182

Query: 322 GIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP---EPLSSLKS---- 374
           G+ V  VS G  H   + S G ++T+G G  G LGHGD    + P   E LS LK+    
Sbjct: 183 GLQVAYVSCGTWHTALITSMGQLFTFGDGSFGVLGHGDLKSVSYPREVESLSGLKTIAVA 242

Query: 375 ----HLA--VQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLR 428
               H A  V+V   +  + V +  G ++ +G      LG  D+   +  L+P  + +L 
Sbjct: 243 CGVWHTAAIVEVIVTRSSSSVKLSAGKLFTWGDGDKHRLGHGDK---ETRLKPTCVATLI 299

Query: 429 AHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 464
            H   +++ G   TV +T  G++   G+    QLG+
Sbjct: 300 DHDFYRVACGHSLTVALTTSGQVLSMGNAVYGQLGN 335



 Score = 88.2 bits (217), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 66/229 (28%), Positives = 109/229 (47%), Gaps = 23/229 (10%)

Query: 264 PLEE--VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRK 321
           PLE   V  V  +  G  +   V  NG V+++G  S   LGHG + D ++PR +++    
Sbjct: 70  PLESNLVLDVYHVDCGVKHAALVMKNGEVFTWGEDSGGRLGHGTREDCVRPRLVESLTVS 129

Query: 322 GIHVVRVSAGDEHVVALDSSGYVYTWGKGY--CGALGHGDEIDKTLPEPLSSLKSHLAVQ 379
            +  V  + G+ H  A+ ++G +Y+WG G    G LGHG+++   +P+ +S     L V 
Sbjct: 130 NVDFV--ACGEFHTCAVTTTGELYSWGDGTHNVGLLGHGNDVGHWIPKRVSGALEGLQVA 187

Query: 380 -VCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTG 438
            V      T ++   G ++ FG   FG LG  D      V  PR ++SL       ++ G
Sbjct: 188 YVSCGTWHTALITSMGQLFTFGDGSFGVLGHGDL---KSVSYPREVESLSGLKTIAVACG 244

Query: 439 LYHTVVVTD-------------RGRLFGFGDNERAQLGHDTLRGCLEPT 474
           ++HT  + +              G+LF +GD ++ +LGH      L+PT
Sbjct: 245 VWHTAAIVEVIVTRSSSSVKLSAGKLFTWGDGDKHRLGHGDKETRLKPT 293



 Score = 85.9 bits (211), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 87/343 (25%), Positives = 145/343 (42%), Gaps = 26/343 (7%)

Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 179
           ++  L++ N  VF+ G    G LGHG     CV    +   + ++V  V+  E H   V 
Sbjct: 87  KHAALVMKNGEVFTWGEDSGGRLGHGTR-EDCVRPRLVESLTVSNVDFVACGEFHTCAVT 145

Query: 180 QSGQVFTCGDNSSFC--CGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHV 237
            +G++++ GD +      GH +        R+  AL+G+    V+ G   T  +T  G +
Sbjct: 146 TTGELYSWGDGTHNVGLLGHGNDVGHWIPKRVSGALEGLQVAYVSCGTWHTALITSMGQL 205

Query: 238 HTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT------------ 285
            T G  + G LGHGD      P+ +  L  + ++  +A G  +  A+             
Sbjct: 206 FTFGDGSFGVLGHGDLKSVSYPREVESLSGLKTIA-VACGVWHTAAIVEVIVTRSSSSVK 264

Query: 286 -GNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
              G ++++G G    LGHG++   L+P  + T      +  RV+ G    VAL +SG V
Sbjct: 265 LSAGKLFTWGDGDKHRLGHGDKETRLKPTCVATLIDHDFY--RVACGHSLTVALTTSGQV 322

Query: 345 YTWGKGYCGALG--HGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWM 402
            + G    G LG  H D     L E    +     +Q+        VL     V+ +G  
Sbjct: 323 LSMGNAVYGQLGNPHSDGRIPCLVE--DKIVGEQVIQIACGSYHVAVLTGRNEVFTWGKG 380

Query: 403 GFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVV 445
             G LG  D  + D+ + P +++ L+   V  I+ G   T  +
Sbjct: 381 ANGRLGHGD--IEDRKV-PTLVEVLKDRAVRYIACGANFTAAI 420



 Score = 75.1 bits (183), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 62/228 (27%), Positives = 106/228 (46%), Gaps = 15/228 (6%)

Query: 116 ITTGRYHTLLISN-SSVFSCGSSLCGVLGHG-------PETTQCVSFTRI-----NFPSA 162
           ++ G +HT LI++   +F+ G    GVLGHG       P   + +S  +           
Sbjct: 189 VSCGTWHTALITSMGQLFTFGDGSFGVLGHGDLKSVSYPREVESLSGLKTIAVACGVWHT 248

Query: 163 AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 222
           A +V+V  + + ++  L +G++FT GD      GH D    + +P  V  L      +V 
Sbjct: 249 AAIVEVIVTRSSSSVKLSAGKLFTWGDGDKHRLGHGDKETRL-KPTCVATLIDHDFYRVA 307

Query: 223 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 282
            G + T  LT  G V + G+  +GQLG+  + D   P  +        V+QIA G  ++ 
Sbjct: 308 CGHSLTVALTTSGQVLSMGNAVYGQLGNPHS-DGRIPCLVEDKIVGEQVIQIACGSYHVA 366

Query: 283 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 330
            +TG   V+++G G+N  LGHG+  D   P  ++  + + +  +   A
Sbjct: 367 VLTGRNEVFTWGKGANGRLGHGDIEDRKVPTLVEVLKDRAVRYIACGA 414



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 54/186 (29%), Positives = 85/186 (45%), Gaps = 4/186 (2%)

Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 351
           S  +GS+  +    + D L P+ +++     + V  V  G +H   +  +G V+TWG+  
Sbjct: 48  SVRTGSDTVISSTGRTDILLPKPLES--NLVLDVYHVDCGVKHAALVMKNGEVFTWGEDS 105

Query: 352 CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 411
            G LGHG   D   P  + SL       V   +  T  +  TG +Y +G  G  ++G   
Sbjct: 106 GGRLGHGTREDCVRPRLVESLTVSNVDFVACGEFHTCAVTTTGELYSWG-DGTHNVGLLG 164

Query: 412 RGVSDKVLRP-RILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGC 470
            G       P R+  +L    V+ +S G +HT ++T  G+LF FGD     LGH  L+  
Sbjct: 165 HGNDVGHWIPKRVSGALEGLQVAYVSCGTWHTALITSMGQLFTFGDGSFGVLGHGDLKSV 224

Query: 471 LEPTEI 476
             P E+
Sbjct: 225 SYPREV 230



 Score = 56.6 bits (135), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 45/141 (31%), Positives = 66/141 (46%), Gaps = 24/141 (17%)

Query: 329 SAGDEHVVALDSSGYVYTWGKGYCGA---------LGHGDEIDKTLPEPLSSLKSHLAVQ 379
           SA DE     DS G VY WG+  C           +      D  LP+P   L+S+L + 
Sbjct: 26  SAQDE----CDSLGDVYVWGEVVCDTSVRTGSDTVISSTGRTDILLPKP---LESNLVLD 78

Query: 380 V----CARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQI 435
           V    C  K    V+ + G V+ +G    G LG    G  +  +RPR+++SL   +V  +
Sbjct: 79  VYHVDCGVKHAALVMKN-GEVFTWGEDSGGRLGH---GTREDCVRPRLVESLTVSNVDFV 134

Query: 436 STGLYHTVVVTDRGRLFGFGD 456
           + G +HT  VT  G L+ +GD
Sbjct: 135 ACGEFHTCAVTTTGELYSWGD 155


>gi|60360320|dbj|BAD90404.1| mKIAA0393 protein [Mus musculus]
          Length = 1871

 Score =  131 bits (330), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 96/328 (29%), Positives = 159/328 (48%), Gaps = 16/328 (4%)

Query: 161 SAAHVVQVSASENHAAFVLQSGQVFTCGD--NSSFCCGHRDTNRPIFRPRLVEALKGVPC 218
           SA +VVQV+        V   G+V++CG+  N     G      PI  PR + AL     
Sbjct: 26  SALNVVQVAGGSKSLFAVTVEGKVYSCGEATNGRLGLGMSSGTVPI--PRQITALSSYVV 83

Query: 219 KQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA 276
           K+V   +G      LT+ G V + G    G+LGH   ++   P+ I  L+    +  IA 
Sbjct: 84  KKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALK-TKRIRDIAC 142

Query: 277 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEH 334
           G S+  A+T +G +Y++G G    LGHG+   +L+P+ ++     G  V++V+ G  D  
Sbjct: 143 GSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLL--GHRVIQVACGSRDAQ 200

Query: 335 VVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 394
            +AL   G V++WG G  G LG G      +P+ +  L      Q+    + +  L  +G
Sbjct: 201 TLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSG 260

Query: 395 SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 454
            V+ +G   +  LG    G    V +P++++ LR   +  ++ G  H + VTD G+++ +
Sbjct: 261 VVWTWGKGDYFRLG---HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAW 317

Query: 455 GDNERAQLGHDTLRGCLEPTEIFIQEME 482
           GDN+  Q G+ T     +PT   +Q +E
Sbjct: 318 GDNDHGQQGNGTTTVNRKPT--LVQGLE 343



 Score =  125 bits (315), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 87/262 (33%), Positives = 132/262 (50%), Gaps = 9/262 (3%)

Query: 207 PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHG-DTLDRPTPKSIAPL 265
           P   E L  +   QV  G      +T+ G V++CG  T+G+LG G  +   P P+ I  L
Sbjct: 19  PSFSETLSALNVVQVAGGSKSLFAVTVEGKVYSCGEATNGRLGLGMSSGTVPIPRQITAL 78

Query: 266 EE-VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH 324
              V   V + +G  +  A+T +G V+S+G G +  LGH  + +  +PR I+  + K I 
Sbjct: 79  SSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIR 138

Query: 325 VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVC--A 382
              ++ G  H  AL SSG +YTWG G  G LGHGD   +  P+ +  L  H  +QV   +
Sbjct: 139 --DIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGS 196

Query: 383 RKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHT 442
           R  +T  L D G V+ +G   FG LG   RG S+    P+ ++ L    V QI  G   +
Sbjct: 197 RDAQTLALTDEGLVFSWGDGDFGKLG---RGGSEGCNIPQNIERLNGQGVCQIECGAQFS 253

Query: 443 VVVTDRGRLFGFGDNERAQLGH 464
           + +T  G ++ +G  +  +LGH
Sbjct: 254 LALTKSGVVWTWGKGDYFRLGH 275



 Score =  122 bits (306), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 85/280 (30%), Positives = 139/280 (49%), Gaps = 9/280 (3%)

Query: 166  VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 225
            V V++   H   +   G+V++ G+      GH + + P  RPR++E+L+G+    V AG 
Sbjct: 1079 VAVNSGGKHCLALSSEGEVYSWGEAKDGKLGHGNRS-PCDRPRVIESLRGIEVVDVAAGG 1137

Query: 226  NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA--AGPSYMLA 283
              +  +T  G ++T G   +G+LGH D+ D+  PK +  L+    V+ IA  +G +  L 
Sbjct: 1138 AHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQG-HRVIDIACGSGDAQTLC 1196

Query: 284  VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 343
            +T +  V+S+G G    LG G       P  I +    G+ VV+V  G +  VAL  SG 
Sbjct: 1197 LTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL--TGLGVVKVECGSQFSVALTKSGA 1254

Query: 344  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 403
            VYTWGKG    LGHG +     P  +  L+    + +           + G VY +G   
Sbjct: 1255 VYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDND 1314

Query: 404  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV 443
             G LG    G ++ + RPR++ +L+   V++++ G  HT+
Sbjct: 1315 EGQLG---DGTTNAIQRPRLVAALQGKKVNRVACGSAHTL 1351



 Score =  122 bits (305), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 82/269 (30%), Positives = 131/269 (48%), Gaps = 6/269 (2%)

Query: 207  PRLVEALKGVPCKQV--TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP 264
            P L+E+++ V  K+V   +G      L+  G V++ G    G+LGHG+      P+ I  
Sbjct: 1065 PTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAKDGKLGHGNRSPCDRPRVIES 1124

Query: 265  LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH 324
            L  +  VV +AAG ++   VT  G +Y++G G    LGH +  D+L+P+ ++  +   + 
Sbjct: 1125 LRGI-EVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVI 1183

Query: 325  VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARK 384
             +   +GD   + L     V++WG G  G LG G      +P  + SL     V+V    
Sbjct: 1184 DIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGS 1243

Query: 385  RKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV 444
            + +  L  +G+VY +G   +  LG    G  D V RPR +  L+   V  I+TG  H V 
Sbjct: 1244 QFSVALTKSGAVYTWGKGDYHRLG---HGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 1300

Query: 445  VTDRGRLFGFGDNERAQLGHDTLRGCLEP 473
             T+ G ++ +GDN+  QLG  T      P
Sbjct: 1301 CTEDGEVYTWGDNDEGQLGDGTTNAIQRP 1329



 Score =  102 bits (255), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 84/265 (31%), Positives = 126/265 (47%), Gaps = 12/265 (4%)

Query: 96   FLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFT 155
             L+S++H    ++  A N   + G++   L S   V+S G +  G LGHG   + C    
Sbjct: 1067 LLESIQHV--FIKKVAVN---SGGKHCLALSSEGEVYSWGEAKDGKLGHG-NRSPCDRPR 1120

Query: 156  RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 215
             I       VV V+A   H+A V  +G ++T G       GH D+   + +P+LVEAL+G
Sbjct: 1121 VIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQL-KPKLVEALQG 1179

Query: 216  VPCKQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
                 +   +G   T  LT    V + G   +G+LG G +     P  I  L  +G VV+
Sbjct: 1180 HRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLG-VVK 1238

Query: 274  IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
            +  G  + +A+T +G VY++G G    LGHG      +PR +Q    +G  V+ ++ G  
Sbjct: 1239 VECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGL--QGKKVIAIATGSL 1296

Query: 334  HVVALDSSGYVYTWGKGYCGALGHG 358
            H V     G VYTWG    G LG G
Sbjct: 1297 HCVCCTEDGEVYTWGDNDEGQLGDG 1321



 Score =  101 bits (252), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 77/247 (31%), Positives = 125/247 (50%), Gaps = 12/247 (4%)

Query: 235  GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
            G ++  G N  GQLG   G  +  PTP +++A L  V    Q+  G   + AVT +G +Y
Sbjct: 989  GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPV----QLIGGEQTLFAVTADGKLY 1044

Query: 292  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 351
            + G G+   LG G       P  +++ +   I  V V++G +H +AL S G VY+WG+  
Sbjct: 1045 ATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAK 1104

Query: 352  CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 411
             G LGHG+      P  + SL+    V V A    +  +   G +Y +G   +G LG  D
Sbjct: 1105 DGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD 1164

Query: 412  RGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG 469
               S+  L+P+++++L+ H V  I+  +G   T+ +TD   ++ +GD +  +LG     G
Sbjct: 1165 ---SEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDG 1221

Query: 470  CLEPTEI 476
            C  P +I
Sbjct: 1222 CKVPMKI 1228



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 79/242 (32%), Positives = 114/242 (47%), Gaps = 7/242 (2%)

Query: 119 GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
           GR+ T L  +  VFS G    G LGH      C     I       +  ++   +H+A +
Sbjct: 92  GRHATALTVDGKVFSWGEGDDGKLGHF-SRMNCDKPRLIEALKTKRIRDIACGSSHSAAL 150

Query: 179 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN--FTGFLTIRGH 236
             SG+++T G       GH D N    +P++V+ L G    QV  G     T  LT  G 
Sbjct: 151 TSSGELYTWGLGEYGRLGHGD-NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 209

Query: 237 VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 296
           V + G    G+LG G +     P++I  L   G V QI  G  + LA+T +GVV+++G G
Sbjct: 210 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTWGKG 268

Query: 297 SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 356
             F LGHG      +P+ ++  R  G  +V V+ G  H +A+  SG VY WG    G  G
Sbjct: 269 DYFRLGHGSDVHVRKPQVVEGLR--GKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQG 326

Query: 357 HG 358
           +G
Sbjct: 327 NG 328



 Score = 68.2 bits (165), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 66/225 (29%), Positives = 100/225 (44%), Gaps = 8/225 (3%)

Query: 116 ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           I  G  H+  L S+  +++ G    G LGHG  TTQ +    +       V+QV+     
Sbjct: 140 IACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQ-LKPKMVKVLLGHRVIQVACGSRD 198

Query: 175 AA--FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
           A    +   G VF+ GD      G R  +     P+ +E L G    Q+  G  F+  LT
Sbjct: 199 AQTLALTDEGLVFSWGDGDFGKLG-RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALT 257

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
             G V T G   + +LGHG  +    P+ +  L     +V +A G  + LAVT +G VY+
Sbjct: 258 KSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRG-KKIVHVAVGALHCLAVTDSGQVYA 316

Query: 293 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
           +G   +   G+G      +P  +Q    +G  + RV+ G  H VA
Sbjct: 317 WGDNDHGQQGNGTTTVNRKPTLVQGL--EGQKITRVACGSSHSVA 359



 Score = 55.5 bits (132), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 50/167 (29%), Positives = 76/167 (45%), Gaps = 4/167 (2%)

Query: 118  TGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
            +G   TL L  + +V+S G    G LG G  +  C    +I+  +   VV+V      + 
Sbjct: 1189 SGDAQTLCLTDDDTVWSWGDGDYGKLGRG-GSDGCKVPMKIDSLTGLGVVKVECGSQFSV 1247

Query: 177  FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
             + +SG V+T G       GH   +  + RPR V+ L+G     +  G       T  G 
Sbjct: 1248 ALTKSGAVYTWGKGDYHRLGHGSDDH-VRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGE 1306

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
            V+T G N  GQLG G T     P+ +A L+    V ++A G ++ LA
Sbjct: 1307 VYTWGDNDEGQLGDGTTNAIQRPRLVAALQG-KKVNRVACGSAHTLA 1352



 Score = 50.8 bits (120), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 35/147 (23%), Positives = 71/147 (48%), Gaps = 5/147 (3%)

Query: 332  DEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 391
            D+  ++   SG +Y WG  + G LG  +     +P P  +L +   VQ+   ++  F + 
Sbjct: 979  DDWTLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVT 1038

Query: 392  DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRG 449
              G +Y     G+G+ G    G ++ V  P +L+S++   + +++  +G  H + ++  G
Sbjct: 1039 ADGKLYA---TGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 1095

Query: 450  RLFGFGDNERAQLGHDTLRGCLEPTEI 476
             ++ +G+ +  +LGH     C  P  I
Sbjct: 1096 EVYSWGEAKDGKLGHGNRSPCDRPRVI 1122



 Score = 41.2 bits (95), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 34/113 (30%), Positives = 55/113 (48%), Gaps = 9/113 (7%)

Query: 367 EPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSD-KVLRPRILD 425
           E LS+L     VQV    +  F +   G VY  G    G LG    G+S   V  PR + 
Sbjct: 23  ETLSALN---VVQVAGGSKSLFAVTVEGKVYSCGEATNGRLGL---GMSSGTVPIPRQIT 76

Query: 426 SLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 476
           +L ++ V +++  +G  H   +T  G++F +G+ +  +LGH +   C +P  I
Sbjct: 77  ALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLI 129


>gi|126272574|ref|XP_001362426.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
           [Monodelphis domestica]
          Length = 1057

 Score =  131 bits (330), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 109/333 (32%), Positives = 157/333 (47%), Gaps = 13/333 (3%)

Query: 135 GSSLCGVLGHGPETTQCVSFTRI-NFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSF 193
           G++  G LG G    + V   R  +F     V  V     H  FVL  G V+TCG N   
Sbjct: 5   GNASFGQLGLGGIDEEIVLEPRKSDFFINKKVQDVGCGLRHTVFVLDDGTVYTCGCNDLG 64

Query: 194 CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDT 253
             GH  + +   +P  V AL       V+ G   T  L  +G V+  G +T GQLG   T
Sbjct: 65  QLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDTDGQLGLPGT 121

Query: 254 LDR-PTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHG-EQHDELQ 311
            +    P++I  L ++  +VQIA G  + LA++    V+S+G   +  LG G E   +  
Sbjct: 122 EEYIKVPRNIKSLTDI-QIVQIACGYYHSLALSKGSEVFSWGQNKHGQLGLGFELKSQSA 180

Query: 312 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSS 371
           P+ I++    GI  ++V+AG  H   L  SG ++ WG+   G LG  DE D+ +P  L S
Sbjct: 181 PQLIKSLL--GIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRFVPNLLKS 238

Query: 372 LKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHH 431
           L+S   V +C  +  T  L   G V+ FG  G+G LG      +   + PR +  L    
Sbjct: 239 LRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG---HNSTSHEINPRKVFELMGSI 295

Query: 432 VSQISTGLYHT-VVVTDRGRLFGFGDNERAQLG 463
           V+QI+ G  HT   V   GR++ FG     QLG
Sbjct: 296 VTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 86/276 (31%), Positives = 144/276 (52%), Gaps = 10/276 (3%)

Query: 204 IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 263
           +  PR  +       + V  GL  T F+   G V+TCG N  GQLGH  +  R  P+ + 
Sbjct: 22  VLEPRKSDFFINKKVQDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKS--RKKPEQVV 79

Query: 264 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQ-PRAIQTFRRKG 322
            L+   ++V ++ G ++ LA+   G VY++G  ++  LG     + ++ PR I++     
Sbjct: 80  ALD-AQNIVAVSCGEAHTLALNDKGQVYAWGLDTDGQLGLPGTEEYIKVPRNIKSL--TD 136

Query: 323 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEID-KTLPEPLSSLKSHLAVQVC 381
           I +V+++ G  H +AL     V++WG+   G LG G E+  ++ P+ + SL     +QV 
Sbjct: 137 IQIVQIACGYYHSLALSKGSEVFSWGQNKHGQLGLGFELKSQSAPQLIKSLLGIPFMQVA 196

Query: 382 ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYH 441
           A    +FVL  +G+++G+G   FG LG  D   +D+ + P +L SLR+  +  I  G  H
Sbjct: 197 AGGAHSFVLTLSGAIFGWGRNKFGQLGLNDE--NDRFV-PNLLKSLRSQKIVYICCGEDH 253

Query: 442 TVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF 477
           T  +T  G +F FG     QLGH++    + P ++F
Sbjct: 254 TAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVF 289



 Score =  112 bits (279), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 80/291 (27%), Positives = 138/291 (47%), Gaps = 8/291 (2%)

Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 179
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V VS  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVSCGEAHTLALN 100

Query: 180 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 239
             GQV+  G ++    G   T   I  PR +++L  +   Q+  G   +  L+    V +
Sbjct: 101 DKGQVYAWGLDTDGQLGLPGTEEYIKVPRNIKSLTDIQIVQIACGYYHSLALSKGSEVFS 160

Query: 240 CGSNTHGQLGHGDTLD-RPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
            G N HGQLG G  L  +  P+ I  L  +   +Q+AAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKHGQLGLGFELKSQSAPQLIKSLLGI-PFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 299 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 358
             LG  +++D   P  +++ R + I  V +  G++H  AL   G V+T+G G  G LGH 
Sbjct: 220 GQLGLNDENDRFVPNLLKSLRSQKI--VYICCGEDHTAALTKEGGVFTFGAGGYGQLGHN 277

Query: 359 DEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLG 408
               +  P  +  L   +  Q+ C R+  +  +  +G +Y FG  G G LG
Sbjct: 278 STSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 81/273 (29%), Positives = 131/273 (47%), Gaps = 8/273 (2%)

Query: 98  QSVEHSSDIVETSAGNM-QITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFT 155
           +S +    +V   A N+  ++ G  HTL +++   V++ G    G LG  P T + +   
Sbjct: 70  KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDTDGQLGL-PGTEEYIKVP 128

Query: 156 R-INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALK 214
           R I   +   +VQ++    H+  + +  +VF+ G N     G     +    P+L+++L 
Sbjct: 129 RNIKSLTDIQIVQIACGYYHSLALSKGSEVFSWGQNKHGQLGLGFELKSQSAPQLIKSLL 188

Query: 215 GVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQI 274
           G+P  QV AG   +  LT+ G +   G N  GQLG  D  DR  P  +  L     +V I
Sbjct: 189 GIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRFVPNLLKSLRS-QKIVYI 247

Query: 275 AAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEH 334
             G  +  A+T  G V++FG+G    LGH     E+ PR +  F   G  V +++ G +H
Sbjct: 248 CCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQH 305

Query: 335 VVA-LDSSGYVYTWGKGYCGALGHGDEIDKTLP 366
             A + SSG +Y++G G  G LG G   ++  P
Sbjct: 306 TSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338



 Score = 81.6 bits (200), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 70/206 (33%), Positives = 98/206 (47%), Gaps = 6/206 (2%)

Query: 114 MQITTGRYHTLLISN-SSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +QI  G YH+L +S  S VFS G +  G LG G E     +   I        +QV+A  
Sbjct: 140 VQIACGYYHSLALSKGSEVFSWGQNKHGQLGLGFELKSQSAPQLIKSLLGIPFMQVAAGG 199

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            H+  +  SG +F  G N     G  D N   F P L+++L+      +  G + T  LT
Sbjct: 200 AHSFVLTLSGAIFGWGRNKFGQLGLNDENDR-FVPNLLKSLRSQKIVYICCGEDHTAALT 258

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVV 290
             G V T G+  +GQLGH  T     P+ +   E +GS+V QIA G  +  A V  +G +
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRI 316

Query: 291 YSFGSGSNFCLGHGEQHDELQPRAIQ 316
           YSFG G N  LG G   +   P  ++
Sbjct: 317 YSFGLGGNGQLGTGSTSNRKSPFTVK 342



 Score = 56.2 bits (134), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 54/217 (24%), Positives = 99/217 (45%), Gaps = 7/217 (3%)

Query: 50  PQKFRSLVDLAASQLCALHSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVET 109
           P+  +SL D+   Q+   +     +S+  ++    + N + +  L F    + +  ++++
Sbjct: 128 PRNIKSLTDIQIVQIACGYYHSLALSKGSEVFSWGQ-NKHGQLGLGFELKSQSAPQLIKS 186

Query: 110 SAG--NMQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVV 166
             G   MQ+  G  H+ +++ S ++F  G +  G LG   E  + V    +    +  +V
Sbjct: 187 LLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRFVP-NLLKSLRSQKIV 245

Query: 167 QVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN 226
            +   E+H A + + G VFT G       GH  T+  I  PR V  L G    Q+  G  
Sbjct: 246 YICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI-NPRKVFELMGSIVTQIACGRQ 304

Query: 227 FT-GFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSI 262
            T  F+   G +++ G   +GQLG G T +R +P ++
Sbjct: 305 HTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341


>gi|14586365|emb|CAC42896.1| putative protein [Arabidopsis thaliana]
          Length = 1062

 Score =  131 bits (330), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 99/323 (30%), Positives = 151/323 (46%), Gaps = 20/323 (6%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVPCKQVTA 223
           V  ++    HA  V + G+ F+ G+ S    GH  D+N  I +P+L++AL     + V  
Sbjct: 297 VQNIACGGQHAVLVTKQGESFSWGEESEGRLGHGVDSN--IQQPKLIDALNTTNIELVAC 354

Query: 224 GLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
           G   +  +T+ G ++T G    G LGHG+ +    PK +  L E   V  IA GP +   
Sbjct: 355 GEFHSCAVTLSGDLYTWGKGDFGVLGHGNEVSHWVPKRVNFLLEGIHVSSIACGPYHTAV 414

Query: 284 VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL----- 338
           VT  G +++FG G+   LGHG++     PR + +   KG+  VR + G  H  A+     
Sbjct: 415 VTSAGQLFTFGDGTFGVLGHGDKKSVFIPREVDSL--KGLRTVRAACGVWHTAAVVEVMV 472

Query: 339 -------DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 391
                   SSG ++TWG G  G LGHG++  K +P  +++L      QV      T  L 
Sbjct: 473 GSSSSSNCSSGKLFTWGDGDKGRLGHGNKEPKLVPTCVAALVEPNFCQVACGHSLTVALT 532

Query: 392 DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRL 451
            +G VY  G   +G LG      +D     R+   L    V +I+ G YH  V+T R  +
Sbjct: 533 TSGHVYTMGSPVYGQLG---NSHADGKTPNRVEGKLHKSFVEEIACGAYHVAVLTSRTEV 589

Query: 452 FGFGDNERAQLGHDTLRGCLEPT 474
           + +G     +LGH  +     PT
Sbjct: 590 YTWGKGSNGRLGHGDVDDRNSPT 612



 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 90/272 (33%), Positives = 131/272 (48%), Gaps = 19/272 (6%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFP-SAAHVVQVSASEN 173
           +  G +H+  ++ S  +++ G    GVLGHG E +  V   R+NF     HV  ++    
Sbjct: 352 VACGEFHSCAVTLSGDLYTWGKGDFGVLGHGNEVSHWVP-KRVNFLLEGIHVSSIACGPY 410

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT- 232
           H A V  +GQ+FT GD +    GH D  + +F PR V++LKG+   +   G+  T  +  
Sbjct: 411 HTAVVTSAGQLFTFGDGTFGVLGHGD-KKSVFIPREVDSLKGLRTVRAACGVWHTAAVVE 469

Query: 233 -----------IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 281
                        G + T G    G+LGHG+   +  P  +A L E  +  Q+A G S  
Sbjct: 470 VMVGSSSSSNCSSGKLFTWGDGDKGRLGHGNKEPKLVPTCVAALVEP-NFCQVACGHSLT 528

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 341
           +A+T +G VY+ GS     LG+    D   P  ++    K   V  ++ G  HV  L S 
Sbjct: 529 VALTTSGHVYTMGSPVYGQLGNS-HADGKTPNRVEGKLHKSF-VEEIACGAYHVAVLTSR 586

Query: 342 GYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
             VYTWGKG  G LGHGD  D+  P  + SLK
Sbjct: 587 TEVYTWGKGSNGRLGHGDVDDRNSPTLVESLK 618



 Score = 89.7 bits (221), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 73/270 (27%), Positives = 123/270 (45%), Gaps = 17/270 (6%)

Query: 207 PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 266
           P+ +E+   +  + +  G      +T +G   + G  + G+LGHG   +   PK I  L 
Sbjct: 286 PKALESTIVLDVQNIACGGQHAVLVTKQGESFSWGEESEGRLGHGVDSNIQQPKLIDALN 345

Query: 267 EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVV 326
              ++  +A G  +  AVT +G +Y++G G    LGHG +     P+ +  F  +GIHV 
Sbjct: 346 TT-NIELVACGEFHSCAVTLSGDLYTWGKGDFGVLGHGNEVSHWVPKRV-NFLLEGIHVS 403

Query: 327 RVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRK 386
            ++ G  H   + S+G ++T+G G  G LGHGD+    +P  + SLK    V+       
Sbjct: 404 SIACGPYHTAVVTSAGQLFTFGDGTFGVLGHGDKKSVFIPREVDSLKGLRTVRAACGVWH 463

Query: 387 TFVLVDT------------GSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQ 434
           T  +V+             G ++ +G    G LG    G  +  L P  + +L   +  Q
Sbjct: 464 TAAVVEVMVGSSSSSNCSSGKLFTWGDGDKGRLG---HGNKEPKLVPTCVAALVEPNFCQ 520

Query: 435 ISTGLYHTVVVTDRGRLFGFGDNERAQLGH 464
           ++ G   TV +T  G ++  G     QLG+
Sbjct: 521 VACGHSLTVALTTSGHVYTMGSPVYGQLGN 550



 Score = 82.4 bits (202), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 72/248 (29%), Positives = 112/248 (45%), Gaps = 22/248 (8%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           I  G YHT +++++  +F+ G    GVLGHG + +  +    ++       V+ +    H
Sbjct: 405 IACGPYHTAVVTSAGQLFTFGDGTFGVLGHGDKKSVFIP-REVDSLKGLRTVRAACGVWH 463

Query: 175 AAFVLQ------------SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 222
            A V++            SG++FT GD      GH +   P   P  V AL      QV 
Sbjct: 464 TAAVVEVMVGSSSSSNCSSGKLFTWGDGDKGRLGHGN-KEPKLVPTCVAALVEPNFCQVA 522

Query: 223 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 282
            G + T  LT  GHV+T GS  +GQLG+    D  TP  +        V +IA G  ++ 
Sbjct: 523 CGHSLTVALTTSGHVYTMGSPVYGQLGNSHA-DGKTPNRVEGKLHKSFVEEIACGAYHVA 581

Query: 283 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
            +T    VY++G GSN  LGHG+  D   P  +++ + K   V  ++ G     A+    
Sbjct: 582 VLTSRTEVYTWGKGSNGRLGHGDVDDRNSPTLVESLKDK--QVKSIACGTNFTAAV---- 635

Query: 343 YVYTWGKG 350
            ++ W  G
Sbjct: 636 CIHRWASG 643



 Score = 71.6 bits (174), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 56/181 (30%), Positives = 90/181 (49%), Gaps = 8/181 (4%)

Query: 296 GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGAL 355
           GS+F +    + D L P+A+++     + V  ++ G +H V +   G  ++WG+   G L
Sbjct: 274 GSSFDI----KMDSLLPKALES--TIVLDVQNIACGGQHAVLVTKQGESFSWGEESEGRL 327

Query: 356 GHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVS 415
           GHG + +   P+ + +L +     V   +  +  +  +G +Y +G   FG LG  +  VS
Sbjct: 328 GHGVDSNIQQPKLIDALNTTNIELVACGEFHSCAVTLSGDLYTWGKGDFGVLGHGNE-VS 386

Query: 416 DKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTE 475
             V + R+   L   HVS I+ G YHT VVT  G+LF FGD     LGH   +    P E
Sbjct: 387 HWVPK-RVNFLLEGIHVSSIACGPYHTAVVTSAGQLFTFGDGTFGVLGHGDKKSVFIPRE 445

Query: 476 I 476
           +
Sbjct: 446 V 446


>gi|225463891|ref|XP_002264093.1| PREDICTED: uncharacterized protein LOC100246114 [Vitis vinifera]
          Length = 1129

 Score =  131 bits (330), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 100/315 (31%), Positives = 148/315 (46%), Gaps = 21/315 (6%)

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
           HAA V + G++FT G+ S    GH    R + +PRLVE+L       V  G   T  +T+
Sbjct: 291 HAALVTRQGEIFTWGEESGGRLGH-GVGRDVIQPRLVESLAFTSVDFVACGEFHTCAVTM 349

Query: 234 RGHVHTCGSNTH--GQLGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSYMLAVTGNGVV 290
            G + T G  TH  G LGHG  +    PK I+ PLE +  V  +  GP +   VT    +
Sbjct: 350 AGELFTWGDGTHNAGLLGHGTDVSHWIPKRISGPLEGL-QVASVTCGPWHTALVTTTRQL 408

Query: 291 YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD----------- 339
           ++FG G+   LGHG++ +   PR +++    G+  + V+ G  H  A+            
Sbjct: 409 FTFGDGTFGVLGHGDKDNVAYPREVESL--SGLRTIAVACGVWHTAAVVEVIVTQSSASV 466

Query: 340 SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGF 399
           SSG ++TWG G    LGHGD+  +  P  + +L  +   +V      T  L  +G V   
Sbjct: 467 SSGKLFTWGDGDKNRLGHGDKEPRLKPTCVPALIEYNFQKVACGHSLTVGLTTSGQVCTM 526

Query: 400 GWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNER 459
           G   +G LG P    SD  L   + D L    V +I+ G YH  V+T R  ++ +G    
Sbjct: 527 GSTVYGQLGNPQ---SDGKLPCFVEDKLLGECVEEIACGAYHVAVLTSRNEVYTWGKGAN 583

Query: 460 AQLGHDTLRGCLEPT 474
            +LGH  +     PT
Sbjct: 584 GRLGHGDIEDRKTPT 598



 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 86/282 (30%), Positives = 128/282 (45%), Gaps = 21/282 (7%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSL--CGVLGHGPETTQCVSFTRINFP-SAAHVVQVSAS 171
           +  G +HT  ++ +  +F+ G      G+LGHG + +  +   RI+ P     V  V+  
Sbjct: 337 VACGEFHTCAVTMAGELFTWGDGTHNAGLLGHGTDVSHWIP-KRISGPLEGLQVASVTCG 395

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
             H A V  + Q+FT GD +    GH D +   + PR VE+L G+    V  G+  T  +
Sbjct: 396 PWHTALVTTTRQLFTFGDGTFGVLGHGDKDNVAY-PREVESLSGLRTIAVACGVWHTAAV 454

Query: 232 T-----------IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 280
                         G + T G     +LGHGD   R  P  +  L E  +  ++A G S 
Sbjct: 455 VEVIVTQSSASVSSGKLFTWGDGDKNRLGHGDKEPRLKPTCVPALIEY-NFQKVACGHSL 513

Query: 281 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 340
            + +T +G V + GS     LG+  Q D   P  ++  +  G  V  ++ G  HV  L S
Sbjct: 514 TVGLTTSGQVCTMGSTVYGQLGN-PQSDGKLPCFVED-KLLGECVEEIACGAYHVAVLTS 571

Query: 341 SGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKS-HLAVQVC 381
              VYTWGKG  G LGHGD  D+  P  + +LK  H+    C
Sbjct: 572 RNEVYTWGKGANGRLGHGDIEDRKTPTLVETLKDRHVKYIAC 613



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 70/227 (30%), Positives = 109/227 (48%), Gaps = 21/227 (9%)

Query: 264 PLEE--VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRK 321
           PLE   V  V  IA G  +   VT  G ++++G  S   LGHG   D +QPR +++    
Sbjct: 273 PLESNVVLDVHHIACGVRHAALVTRQGEIFTWGEESGGRLGHGVGRDVIQPRLVESLAFT 332

Query: 322 GIHVVRVSAGDEHVVALDSSGYVYTWGKGY--CGALGHGDEIDKTLPEPLSSLKSHLAV- 378
            +    V+ G+ H  A+  +G ++TWG G    G LGHG ++   +P+ +S     L V 
Sbjct: 333 SVDF--VACGEFHTCAVTMAGELFTWGDGTHNAGLLGHGTDVSHWIPKRISGPLEGLQVA 390

Query: 379 QVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTG 438
            V      T ++  T  ++ FG   FG LG  D+   D V  PR ++SL       ++ G
Sbjct: 391 SVTCGPWHTALVTTTRQLFTFGDGTFGVLGHGDK---DNVAYPREVESLSGLRTIAVACG 447

Query: 439 LYHTVVVTD-----------RGRLFGFGDNERAQLGHDTLRGCLEPT 474
           ++HT  V +            G+LF +GD ++ +LGH      L+PT
Sbjct: 448 VWHTAAVVEVIVTQSSASVSSGKLFTWGDGDKNRLGHGDKEPRLKPT 494



 Score = 77.4 bits (189), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 74/285 (25%), Positives = 131/285 (45%), Gaps = 18/285 (6%)

Query: 200 TNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTP 259
           T   +  P+ +E+   +    +  G+     +T +G + T G  + G+LGHG   D   P
Sbjct: 264 TRADLLLPKPLESNVVLDVHHIACGVRHAALVTRQGEIFTWGEESGGRLGHGVGRDVIQP 323

Query: 260 KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC--LGHGEQHDELQPRAIQT 317
           + +  L    SV  +A G  +  AVT  G ++++G G++    LGHG       P+ I +
Sbjct: 324 RLVESL-AFTSVDFVACGEFHTCAVTMAGELFTWGDGTHNAGLLGHGTDVSHWIPKRI-S 381

Query: 318 FRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP---EPLSSLKS 374
              +G+ V  V+ G  H   + ++  ++T+G G  G LGHGD+ +   P   E LS L++
Sbjct: 382 GPLEGLQVASVTCGPWHTALVTTTRQLFTFGDGTFGVLGHGDKDNVAYPREVESLSGLRT 441

Query: 375 --------HLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDS 426
                   H A  V     ++   V +G ++ +G      LG  D+   +  L+P  + +
Sbjct: 442 IAVACGVWHTAAVVEVIVTQSSASVSSGKLFTWGDGDKNRLGHGDK---EPRLKPTCVPA 498

Query: 427 LRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCL 471
           L  ++  +++ G   TV +T  G++   G     QLG+    G L
Sbjct: 499 LIEYNFQKVACGHSLTVGLTTSGQVCTMGSTVYGQLGNPQSDGKL 543



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 46/170 (27%), Positives = 71/170 (41%), Gaps = 4/170 (2%)

Query: 308 DELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPE 367
           D L P+ +++     +H   ++ G  H   +   G ++TWG+   G LGHG   D   P 
Sbjct: 267 DLLLPKPLESNVVLDVH--HIACGVRHAALVTRQGEIFTWGEESGGRLGHGVGRDVIQPR 324

Query: 368 PLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRP-RILDS 426
            + SL       V   +  T  +   G ++ +G  G  + G    G       P RI   
Sbjct: 325 LVESLAFTSVDFVACGEFHTCAVTMAGELFTWG-DGTHNAGLLGHGTDVSHWIPKRISGP 383

Query: 427 LRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 476
           L    V+ ++ G +HT +VT   +LF FGD     LGH        P E+
Sbjct: 384 LEGLQVASVTCGPWHTALVTTTRQLFTFGDGTFGVLGHGDKDNVAYPREV 433


>gi|145357939|ref|NP_568268.3| Regulator of chromosome condensation-like protein with FYVE zinc
           finger domain-containing protein [Arabidopsis thaliana]
 gi|332004415|gb|AED91798.1| Regulator of chromosome condensation-like protein with FYVE zinc
           finger domain-containing protein [Arabidopsis thaliana]
          Length = 1075

 Score =  131 bits (330), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 99/323 (30%), Positives = 151/323 (46%), Gaps = 20/323 (6%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVPCKQVTA 223
           V  ++    HA  V + G+ F+ G+ S    GH  D+N  I +P+L++AL     + V  
Sbjct: 310 VQNIACGGQHAVLVTKQGESFSWGEESEGRLGHGVDSN--IQQPKLIDALNTTNIELVAC 367

Query: 224 GLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
           G   +  +T+ G ++T G    G LGHG+ +    PK +  L E   V  IA GP +   
Sbjct: 368 GEFHSCAVTLSGDLYTWGKGDFGVLGHGNEVSHWVPKRVNFLLEGIHVSSIACGPYHTAV 427

Query: 284 VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL----- 338
           VT  G +++FG G+   LGHG++     PR + +   KG+  VR + G  H  A+     
Sbjct: 428 VTSAGQLFTFGDGTFGVLGHGDKKSVFIPREVDSL--KGLRTVRAACGVWHTAAVVEVMV 485

Query: 339 -------DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 391
                   SSG ++TWG G  G LGHG++  K +P  +++L      QV      T  L 
Sbjct: 486 GSSSSSNCSSGKLFTWGDGDKGRLGHGNKEPKLVPTCVAALVEPNFCQVACGHSLTVALT 545

Query: 392 DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRL 451
            +G VY  G   +G LG      +D     R+   L    V +I+ G YH  V+T R  +
Sbjct: 546 TSGHVYTMGSPVYGQLG---NSHADGKTPNRVEGKLHKSFVEEIACGAYHVAVLTSRTEV 602

Query: 452 FGFGDNERAQLGHDTLRGCLEPT 474
           + +G     +LGH  +     PT
Sbjct: 603 YTWGKGSNGRLGHGDVDDRNSPT 625



 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 90/272 (33%), Positives = 131/272 (48%), Gaps = 19/272 (6%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFP-SAAHVVQVSASEN 173
           +  G +H+  ++ S  +++ G    GVLGHG E +  V   R+NF     HV  ++    
Sbjct: 365 VACGEFHSCAVTLSGDLYTWGKGDFGVLGHGNEVSHWVP-KRVNFLLEGIHVSSIACGPY 423

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT- 232
           H A V  +GQ+FT GD +    GH D  + +F PR V++LKG+   +   G+  T  +  
Sbjct: 424 HTAVVTSAGQLFTFGDGTFGVLGHGD-KKSVFIPREVDSLKGLRTVRAACGVWHTAAVVE 482

Query: 233 -----------IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 281
                        G + T G    G+LGHG+   +  P  +A L E  +  Q+A G S  
Sbjct: 483 VMVGSSSSSNCSSGKLFTWGDGDKGRLGHGNKEPKLVPTCVAALVEP-NFCQVACGHSLT 541

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 341
           +A+T +G VY+ GS     LG+    D   P  ++    K   V  ++ G  HV  L S 
Sbjct: 542 VALTTSGHVYTMGSPVYGQLGNSHA-DGKTPNRVEGKLHKSF-VEEIACGAYHVAVLTSR 599

Query: 342 GYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
             VYTWGKG  G LGHGD  D+  P  + SLK
Sbjct: 600 TEVYTWGKGSNGRLGHGDVDDRNSPTLVESLK 631



 Score = 89.7 bits (221), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 73/270 (27%), Positives = 123/270 (45%), Gaps = 17/270 (6%)

Query: 207 PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 266
           P+ +E+   +  + +  G      +T +G   + G  + G+LGHG   +   PK I  L 
Sbjct: 299 PKALESTIVLDVQNIACGGQHAVLVTKQGESFSWGEESEGRLGHGVDSNIQQPKLIDALN 358

Query: 267 EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVV 326
              ++  +A G  +  AVT +G +Y++G G    LGHG +     P+ +  F  +GIHV 
Sbjct: 359 TT-NIELVACGEFHSCAVTLSGDLYTWGKGDFGVLGHGNEVSHWVPKRV-NFLLEGIHVS 416

Query: 327 RVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRK 386
            ++ G  H   + S+G ++T+G G  G LGHGD+    +P  + SLK    V+       
Sbjct: 417 SIACGPYHTAVVTSAGQLFTFGDGTFGVLGHGDKKSVFIPREVDSLKGLRTVRAACGVWH 476

Query: 387 TFVLVDT------------GSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQ 434
           T  +V+             G ++ +G    G LG    G  +  L P  + +L   +  Q
Sbjct: 477 TAAVVEVMVGSSSSSNCSSGKLFTWGDGDKGRLG---HGNKEPKLVPTCVAALVEPNFCQ 533

Query: 435 ISTGLYHTVVVTDRGRLFGFGDNERAQLGH 464
           ++ G   TV +T  G ++  G     QLG+
Sbjct: 534 VACGHSLTVALTTSGHVYTMGSPVYGQLGN 563



 Score = 82.0 bits (201), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 72/248 (29%), Positives = 112/248 (45%), Gaps = 22/248 (8%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           I  G YHT +++++  +F+ G    GVLGHG + +  +    ++       V+ +    H
Sbjct: 418 IACGPYHTAVVTSAGQLFTFGDGTFGVLGHGDKKSVFIP-REVDSLKGLRTVRAACGVWH 476

Query: 175 AAFVLQ------------SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 222
            A V++            SG++FT GD      GH +   P   P  V AL      QV 
Sbjct: 477 TAAVVEVMVGSSSSSNCSSGKLFTWGDGDKGRLGHGN-KEPKLVPTCVAALVEPNFCQVA 535

Query: 223 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 282
            G + T  LT  GHV+T GS  +GQLG+    D  TP  +        V +IA G  ++ 
Sbjct: 536 CGHSLTVALTTSGHVYTMGSPVYGQLGNSHA-DGKTPNRVEGKLHKSFVEEIACGAYHVA 594

Query: 283 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
            +T    VY++G GSN  LGHG+  D   P  +++ + K   V  ++ G     A+    
Sbjct: 595 VLTSRTEVYTWGKGSNGRLGHGDVDDRNSPTLVESLKDK--QVKSIACGTNFTAAV---- 648

Query: 343 YVYTWGKG 350
            ++ W  G
Sbjct: 649 CIHRWASG 656



 Score = 71.6 bits (174), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 56/181 (30%), Positives = 90/181 (49%), Gaps = 8/181 (4%)

Query: 296 GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGAL 355
           GS+F +    + D L P+A+++     + V  ++ G +H V +   G  ++WG+   G L
Sbjct: 287 GSSFDI----KMDSLLPKALES--TIVLDVQNIACGGQHAVLVTKQGESFSWGEESEGRL 340

Query: 356 GHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVS 415
           GHG + +   P+ + +L +     V   +  +  +  +G +Y +G   FG LG  +  VS
Sbjct: 341 GHGVDSNIQQPKLIDALNTTNIELVACGEFHSCAVTLSGDLYTWGKGDFGVLGHGNE-VS 399

Query: 416 DKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTE 475
             V + R+   L   HVS I+ G YHT VVT  G+LF FGD     LGH   +    P E
Sbjct: 400 HWVPK-RVNFLLEGIHVSSIACGPYHTAVVTSAGQLFTFGDGTFGVLGHGDKKSVFIPRE 458

Query: 476 I 476
           +
Sbjct: 459 V 459


>gi|449462158|ref|XP_004148808.1| PREDICTED: uncharacterized protein LOC101222741 [Cucumis sativus]
 gi|449506967|ref|XP_004162897.1| PREDICTED: uncharacterized LOC101222741 [Cucumis sativus]
          Length = 1120

 Score =  131 bits (330), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 97/315 (30%), Positives = 152/315 (48%), Gaps = 21/315 (6%)

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
           HAA V + G+VFT G+ S    GH    + + +PR+VE+L       V  G   T  +TI
Sbjct: 292 HAALVTRQGEVFTWGEESGGRLGH-GVVKDVIQPRMVESLAASSIGFVACGEFHTCAVTI 350

Query: 234 RGHVHTCGSNTH--GQLGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSYMLAVTGNGVV 290
            G ++T G  TH  G LGHG  +    PK ++ PLE +  V  +  GP +   VT  G +
Sbjct: 351 TGELYTWGDGTHNAGLLGHGSDVSHWIPKRVSGPLEGL-QVTSVTCGPWHTALVTSMGQL 409

Query: 291 YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL-----------D 339
           ++FG G+   LGHG++ +   P+ +++    G+  + V+ G  H  A+            
Sbjct: 410 FTFGDGTFGALGHGDRENISYPKEVESL--SGLRTIAVACGVWHTAAVVEVIVTQSSSSI 467

Query: 340 SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGF 399
           SSG ++TWG G    LGHGD+  +  P  + +L  +   +V      T  L  +G V+  
Sbjct: 468 SSGKLFTWGDGDKNRLGHGDKEPRLKPTCVPALIDYDFHKVACGHSITVGLTTSGQVFSM 527

Query: 400 GWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNER 459
           G   +G LG P    +D  +   + D L    V ++S G YH VV+T +  ++ +G    
Sbjct: 528 GSTVYGQLGNPS---ADGKIPCLVEDKLFGESVEEVSCGAYHVVVLTSKNEVYTWGKGAN 584

Query: 460 AQLGHDTLRGCLEPT 474
            +LGH  +     PT
Sbjct: 585 GRLGHGDVEDRKTPT 599



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 86/282 (30%), Positives = 127/282 (45%), Gaps = 21/282 (7%)

Query: 116 ITTGRYHTLLISNSS---VFSCGSSLCGVLGHGPETTQCVSFTRINFP-SAAHVVQVSAS 171
           +  G +HT  ++ +     +  G+   G+LGHG + +  +   R++ P     V  V+  
Sbjct: 338 VACGEFHTCAVTITGELYTWGDGTHNAGLLGHGSDVSHWIP-KRVSGPLEGLQVTSVTCG 396

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
             H A V   GQ+FT GD +    GH D    I  P+ VE+L G+    V  G+  T  +
Sbjct: 397 PWHTALVTSMGQLFTFGDGTFGALGHGDREN-ISYPKEVESLSGLRTIAVACGVWHTAAV 455

Query: 232 T-----------IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 280
                         G + T G     +LGHGD   R  P  +  L +     ++A G S 
Sbjct: 456 VEVIVTQSSSSISSGKLFTWGDGDKNRLGHGDKEPRLKPTCVPALIDY-DFHKVACGHSI 514

Query: 281 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 340
            + +T +G V+S GS     LG+     ++ P  ++  +  G  V  VS G  HVV L S
Sbjct: 515 TVGLTTSGQVFSMGSTVYGQLGNPSADGKI-PCLVED-KLFGESVEEVSCGAYHVVVLTS 572

Query: 341 SGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKS-HLAVQVC 381
              VYTWGKG  G LGHGD  D+  P  + +LK  H+    C
Sbjct: 573 KNEVYTWGKGANGRLGHGDVEDRKTPTLVEALKDRHVKYIAC 614



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 83/310 (26%), Positives = 142/310 (45%), Gaps = 25/310 (8%)

Query: 190 NSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLG 249
           NSS+     D    +  PR +E+   +    +  G+     +T +G V T G  + G+LG
Sbjct: 259 NSSYVTLRTD----VLLPRPLESNIVLDIHHIACGVRHAALVTRQGEVFTWGEESGGRLG 314

Query: 250 HGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC--LGHGEQH 307
           HG   D   P+ +  L    S+  +A G  +  AVT  G +Y++G G++    LGHG   
Sbjct: 315 HGVVKDVIQPRMVESL-AASSIGFVACGEFHTCAVTITGELYTWGDGTHNAGLLGHGSDV 373

Query: 308 DELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPE 367
               P+ + +   +G+ V  V+ G  H   + S G ++T+G G  GALGHGD  + + P+
Sbjct: 374 SHWIPKRV-SGPLEGLQVTSVTCGPWHTALVTSMGQLFTFGDGTFGALGHGDRENISYPK 432

Query: 368 PLSSLKSHLAVQVCARKRKTFVLVDT-----------GSVYGFGWMGFGSLGFPDRGVSD 416
            + SL     + V      T  +V+            G ++ +G      LG  D+   +
Sbjct: 433 EVESLSGLRTIAVACGVWHTAAVVEVIVTQSSSSISSGKLFTWGDGDKNRLGHGDK---E 489

Query: 417 KVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG---CLEP 473
             L+P  + +L  +   +++ G   TV +T  G++F  G     QLG+ +  G   CL  
Sbjct: 490 PRLKPTCVPALIDYDFHKVACGHSITVGLTTSGQVFSMGSTVYGQLGNPSADGKIPCLVE 549

Query: 474 TEIFIQEMEE 483
            ++F + +EE
Sbjct: 550 DKLFGESVEE 559



 Score = 88.6 bits (218), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 90/346 (26%), Positives = 143/346 (41%), Gaps = 34/346 (9%)

Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHVVQVSASE 172
           R+  L+     VF+ G    G LGHG       P   + ++ + I F        V+  E
Sbjct: 291 RHAALVTRQGEVFTWGEESGGRLGHGVVKDVIQPRMVESLAASSIGF--------VACGE 342

Query: 173 NHAAFVLQSGQVFTCGD--NSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
            H   V  +G+++T GD  +++   GH          R+   L+G+    VT G   T  
Sbjct: 343 FHTCAVTITGELYTWGDGTHNAGLLGHGSDVSHWIPKRVSGPLEGLQVTSVTCGPWHTAL 402

Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT----- 285
           +T  G + T G  T G LGHGD  +   PK +  L  + ++  +A G  +  AV      
Sbjct: 403 VTSMGQLFTFGDGTFGALGHGDRENISYPKEVESLSGLRTIA-VACGVWHTAAVVEVIVT 461

Query: 286 ------GNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 339
                  +G ++++G G    LGHG++   L+P  +        H  +V+ G    V L 
Sbjct: 462 QSSSSISSGKLFTWGDGDKNRLGHGDKEPRLKPTCVPALIDYDFH--KVACGHSITVGLT 519

Query: 340 SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGF 399
           +SG V++ G    G LG+     K        L      +V        VL     VY +
Sbjct: 520 TSGQVFSMGSTVYGQLGNPSADGKIPCLVEDKLFGESVEEVSCGAYHVVVLTSKNEVYTW 579

Query: 400 GWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVV 445
           G    G LG  D  V D+   P ++++L+  HV  I+ G  +T  +
Sbjct: 580 GKGANGRLGHGD--VEDRKT-PTLVEALKDRHVKYIACGSNYTAAI 622


>gi|126272576|ref|XP_001362510.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
           [Monodelphis domestica]
          Length = 1049

 Score =  131 bits (330), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 109/333 (32%), Positives = 157/333 (47%), Gaps = 13/333 (3%)

Query: 135 GSSLCGVLGHGPETTQCVSFTRI-NFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSF 193
           G++  G LG G    + V   R  +F     V  V     H  FVL  G V+TCG N   
Sbjct: 5   GNASFGQLGLGGIDEEIVLEPRKSDFFINKKVQDVGCGLRHTVFVLDDGTVYTCGCNDLG 64

Query: 194 CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDT 253
             GH  + +   +P  V AL       V+ G   T  L  +G V+  G +T GQLG   T
Sbjct: 65  QLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDTDGQLGLPGT 121

Query: 254 LDR-PTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHG-EQHDELQ 311
            +    P++I  L ++  +VQIA G  + LA++    V+S+G   +  LG G E   +  
Sbjct: 122 EEYIKVPRNIKSLTDI-QIVQIACGYYHSLALSKGSEVFSWGQNKHGQLGLGFELKSQSA 180

Query: 312 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSS 371
           P+ I++    GI  ++V+AG  H   L  SG ++ WG+   G LG  DE D+ +P  L S
Sbjct: 181 PQLIKSLL--GIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRFVPNLLKS 238

Query: 372 LKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHH 431
           L+S   V +C  +  T  L   G V+ FG  G+G LG      +   + PR +  L    
Sbjct: 239 LRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG---HNSTSHEINPRKVFELMGSI 295

Query: 432 VSQISTGLYHT-VVVTDRGRLFGFGDNERAQLG 463
           V+QI+ G  HT   V   GR++ FG     QLG
Sbjct: 296 VTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 86/276 (31%), Positives = 144/276 (52%), Gaps = 10/276 (3%)

Query: 204 IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 263
           +  PR  +       + V  GL  T F+   G V+TCG N  GQLGH  +  R  P+ + 
Sbjct: 22  VLEPRKSDFFINKKVQDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKS--RKKPEQVV 79

Query: 264 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQ-PRAIQTFRRKG 322
            L+   ++V ++ G ++ LA+   G VY++G  ++  LG     + ++ PR I++     
Sbjct: 80  ALD-AQNIVAVSCGEAHTLALNDKGQVYAWGLDTDGQLGLPGTEEYIKVPRNIKSL--TD 136

Query: 323 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEID-KTLPEPLSSLKSHLAVQVC 381
           I +V+++ G  H +AL     V++WG+   G LG G E+  ++ P+ + SL     +QV 
Sbjct: 137 IQIVQIACGYYHSLALSKGSEVFSWGQNKHGQLGLGFELKSQSAPQLIKSLLGIPFMQVA 196

Query: 382 ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYH 441
           A    +FVL  +G+++G+G   FG LG  D   +D+ + P +L SLR+  +  I  G  H
Sbjct: 197 AGGAHSFVLTLSGAIFGWGRNKFGQLGLNDE--NDRFV-PNLLKSLRSQKIVYICCGEDH 253

Query: 442 TVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF 477
           T  +T  G +F FG     QLGH++    + P ++F
Sbjct: 254 TAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVF 289



 Score =  112 bits (279), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 80/291 (27%), Positives = 138/291 (47%), Gaps = 8/291 (2%)

Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 179
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V VS  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVSCGEAHTLALN 100

Query: 180 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 239
             GQV+  G ++    G   T   I  PR +++L  +   Q+  G   +  L+    V +
Sbjct: 101 DKGQVYAWGLDTDGQLGLPGTEEYIKVPRNIKSLTDIQIVQIACGYYHSLALSKGSEVFS 160

Query: 240 CGSNTHGQLGHGDTLD-RPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
            G N HGQLG G  L  +  P+ I  L  +   +Q+AAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKHGQLGLGFELKSQSAPQLIKSLLGI-PFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 299 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 358
             LG  +++D   P  +++ R + I  V +  G++H  AL   G V+T+G G  G LGH 
Sbjct: 220 GQLGLNDENDRFVPNLLKSLRSQKI--VYICCGEDHTAALTKEGGVFTFGAGGYGQLGHN 277

Query: 359 DEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLG 408
               +  P  +  L   +  Q+ C R+  +  +  +G +Y FG  G G LG
Sbjct: 278 STSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 81/273 (29%), Positives = 131/273 (47%), Gaps = 8/273 (2%)

Query: 98  QSVEHSSDIVETSAGNM-QITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFT 155
           +S +    +V   A N+  ++ G  HTL +++   V++ G    G LG  P T + +   
Sbjct: 70  KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDTDGQLGL-PGTEEYIKVP 128

Query: 156 R-INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALK 214
           R I   +   +VQ++    H+  + +  +VF+ G N     G     +    P+L+++L 
Sbjct: 129 RNIKSLTDIQIVQIACGYYHSLALSKGSEVFSWGQNKHGQLGLGFELKSQSAPQLIKSLL 188

Query: 215 GVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQI 274
           G+P  QV AG   +  LT+ G +   G N  GQLG  D  DR  P  +  L     +V I
Sbjct: 189 GIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRFVPNLLKSLRS-QKIVYI 247

Query: 275 AAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEH 334
             G  +  A+T  G V++FG+G    LGH     E+ PR +  F   G  V +++ G +H
Sbjct: 248 CCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQH 305

Query: 335 VVA-LDSSGYVYTWGKGYCGALGHGDEIDKTLP 366
             A + SSG +Y++G G  G LG G   ++  P
Sbjct: 306 TSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338



 Score = 81.6 bits (200), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 70/206 (33%), Positives = 98/206 (47%), Gaps = 6/206 (2%)

Query: 114 MQITTGRYHTLLISN-SSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +QI  G YH+L +S  S VFS G +  G LG G E     +   I        +QV+A  
Sbjct: 140 VQIACGYYHSLALSKGSEVFSWGQNKHGQLGLGFELKSQSAPQLIKSLLGIPFMQVAAGG 199

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            H+  +  SG +F  G N     G  D N   F P L+++L+      +  G + T  LT
Sbjct: 200 AHSFVLTLSGAIFGWGRNKFGQLGLNDENDR-FVPNLLKSLRSQKIVYICCGEDHTAALT 258

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVV 290
             G V T G+  +GQLGH  T     P+ +   E +GS+V QIA G  +  A V  +G +
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRI 316

Query: 291 YSFGSGSNFCLGHGEQHDELQPRAIQ 316
           YSFG G N  LG G   +   P  ++
Sbjct: 317 YSFGLGGNGQLGTGSTSNRKSPFTVK 342



 Score = 56.2 bits (134), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 54/217 (24%), Positives = 99/217 (45%), Gaps = 7/217 (3%)

Query: 50  PQKFRSLVDLAASQLCALHSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVET 109
           P+  +SL D+   Q+   +     +S+  ++    + N + +  L F    + +  ++++
Sbjct: 128 PRNIKSLTDIQIVQIACGYYHSLALSKGSEVFSWGQ-NKHGQLGLGFELKSQSAPQLIKS 186

Query: 110 SAG--NMQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVV 166
             G   MQ+  G  H+ +++ S ++F  G +  G LG   E  + V    +    +  +V
Sbjct: 187 LLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRFVP-NLLKSLRSQKIV 245

Query: 167 QVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN 226
            +   E+H A + + G VFT G       GH  T+  I  PR V  L G    Q+  G  
Sbjct: 246 YICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI-NPRKVFELMGSIVTQIACGRQ 304

Query: 227 FT-GFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSI 262
            T  F+   G +++ G   +GQLG G T +R +P ++
Sbjct: 305 HTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341


>gi|47214126|emb|CAG01384.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 4628

 Score =  131 bits (329), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 94/326 (28%), Positives = 160/326 (49%), Gaps = 12/326 (3%)

Query: 161  SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQ 220
            SA +VVQV+        V   G+++ CG+ ++   G   ++  I  PR + AL     K+
Sbjct: 2761 SALNVVQVAGGSKSLFAVTVEGKIYACGEATNGRLGLGLSSGTIPIPRQITALSNYVVKK 2820

Query: 221  VT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGP 278
            V   +G      LT+ G V + G    G+LGH   ++   P+ I  L+    +  IA G 
Sbjct: 2821 VAVHSGGRHAMALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALK-AKRIRDIACGS 2879

Query: 279  SYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEHVV 336
            S+  A+T +G +YS+G G    LGHG+   +L+P+ ++     G  V++V+ G  D   +
Sbjct: 2880 SHSAAITSSGELYSWGLGEYGRLGHGDNTTQLRPKLVKVLL--GHRVIQVACGSRDAQTL 2937

Query: 337  ALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSV 396
            AL   G V++WG G  G LG G      +P+ +  L      Q+    + +  L  +G V
Sbjct: 2938 ALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVV 2997

Query: 397  YGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGD 456
            + +G   +  LG    G    V +P++++ LR   +  ++ G  H + VTD G+++ +GD
Sbjct: 2998 WTWGKGDYFRLG---HGTDVHVRKPQMVEGLRGKKIVHVAVGALHCLAVTDTGQVYAWGD 3054

Query: 457  NERAQLGHDTLRGCLEPTEIFIQEME 482
            N+  Q G+ T     +PT   +Q +E
Sbjct: 3055 NDHGQQGNGTTTVNRKPT--LVQGLE 3078



 Score =  125 bits (314), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 91/288 (31%), Positives = 142/288 (49%), Gaps = 10/288 (3%)

Query: 183  QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 242
            +VF  G N     G    ++ I  P   E L  +   QV  G      +T+ G ++ CG 
Sbjct: 2731 KVFVWGLNDKDQLGGLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKIYACGE 2789

Query: 243  NTHGQLGHG-DTLDRPTPKSIAPLEE-VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 300
             T+G+LG G  +   P P+ I  L   V   V + +G  + +A+T +G V+S+G G +  
Sbjct: 2790 ATNGRLGLGLSSGTIPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKVFSWGEGDDGK 2849

Query: 301  LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 360
            LGH  + +  +PR I+  + K I    ++ G  H  A+ SSG +Y+WG G  G LGHGD 
Sbjct: 2850 LGHFSRMNCDKPRLIEALKAKRIR--DIACGSSHSAAITSSGELYSWGLGEYGRLGHGDN 2907

Query: 361  IDKTLPEPLSSLKSHLAVQVC--ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKV 418
              +  P+ +  L  H  +QV   +R  +T  L D G V+ +G   FG LG   RG S+  
Sbjct: 2908 TTQLRPKLVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLG---RGGSEGC 2964

Query: 419  LRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDT 466
              P+ ++ L    V QI  G   ++ +T  G ++ +G  +  +LGH T
Sbjct: 2965 NIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGT 3012



 Score =  118 bits (296), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 93/321 (28%), Positives = 148/321 (46%), Gaps = 29/321 (9%)

Query: 154 FTRINFP------SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRP 207
           +  +N P      S+  V Q+  SE     +  SG V+T    S+              P
Sbjct: 399 YANVNGPIHCKSLSSLGVTQIVCSEKGFLILSSSGAVYTQNYKST-----------TLAP 447

Query: 208 RLVEALKGVPCKQVTAGLNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL 265
            L+ +L      ++ A  +   +L +   G V + G    G+LGHGDT     P  IA  
Sbjct: 448 MLIHSLSSRKMVKLAAHPDGQHYLALSSNGEVFSWGCGDGGRLGHGDTTYLEEPTMIAAF 507

Query: 266 --EEVGS-VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKG 322
             ++ G  VV IA G +Y  A+T +G +Y++G G+   LGHG   D+  P  +     KG
Sbjct: 508 NGKQAGKHVVHIACGSTYSAAITVDGELYTWGRGNYGRLGHGSSEDQTTPMLVTAL--KG 565

Query: 323 IHVVRVS--AGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQV 380
           + VV V+  +GD   +A+  +G V++WG G  G LG G       P+ +  L+    V+V
Sbjct: 566 LKVVDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLVEKLQDLDIVKV 625

Query: 381 CARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLY 440
           C   + +  L   G VY +G      LG    G  + V  P++LD+L+   V  ++ G  
Sbjct: 626 CCGSQFSVALTKDGQVYTWGKGDNQRLG---HGTDEHVRFPKLLDTLQGKKVVDVAVGST 682

Query: 441 HTVVVTDRGRLFGFGDNERAQ 461
           H + +TD G +  +G N++ Q
Sbjct: 683 HCLALTDDGEVHSWGSNDKLQ 703



 Score =  116 bits (290), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 82/294 (27%), Positives = 141/294 (47%), Gaps = 20/294 (6%)

Query: 166  VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 225
            V V++   H   +   G+V++ G+      GH + + P  RPR++E+L+GV    + AG 
Sbjct: 3847 VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRS-PCDRPRVIESLRGVEVVDIAAGG 3905

Query: 226  NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA--AGPSYMLA 283
              +  +T  G + T G   +G+LGHGD+ D+  PK +  L+    V+ +A  +G +  L 
Sbjct: 3906 AHSACITASGELFTWGKGRYGRLGHGDSEDQLKPKLVDALQG-HRVIDVACGSGDAQTLC 3964

Query: 284  VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 343
            +T + +V+S+G G    LG G       P  I +    G+ V++V  G +  VAL  SG 
Sbjct: 3965 LTDDDMVWSWGDGDYGKLGRGGSDGCKTPMKIDSL--TGLGVIKVECGSQFSVALTKSGA 4022

Query: 344  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGW-- 401
            VYTWGKG    LGHG +     P  +  L+    + +           + G +  F W  
Sbjct: 4023 VYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGRIKVFQWGL 4082

Query: 402  ----MGFGSL--------GFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV 443
                +G G +        G    G ++ + RPR++ +L+   +++++ G  HT+
Sbjct: 4083 PRWSLGLGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKINRVACGSAHTL 4136



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 83/286 (29%), Positives = 132/286 (46%), Gaps = 23/286 (8%)

Query: 207  PRLVEALKGVPCKQV--TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP 264
            P L+E+++ V  ++V   +G      L+  G V++ G    G+LGHG+      P+ I  
Sbjct: 3833 PTLLESIQHVFIRKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIES 3892

Query: 265  LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH 324
            L  V  VV IAAG ++   +T +G ++++G G    LGHG+  D+L+P+ +   +   + 
Sbjct: 3893 LRGV-EVVDIAAGGAHSACITASGELFTWGKGRYGRLGHGDSEDQLKPKLVDALQGHRVI 3951

Query: 325  VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARK 384
             V   +GD   + L     V++WG G  G LG G       P  + SL     ++V    
Sbjct: 3952 DVACGSGDAQTLCLTDDDMVWSWGDGDYGKLGRGGSDGCKTPMKIDSLTGLGVIKVECGS 4011

Query: 385  RKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV 444
            + +  L  +G+VY +G   +  LG    G  D V RPR +  L+   V  I+TG  H V 
Sbjct: 4012 QFSVALTKSGAVYTWGKGDYHRLG---HGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 4068

Query: 445  VTDRGRL-----------------FGFGDNERAQLGHDTLRGCLEP 473
             T+ GR+                 + +GDN+  QLG  T      P
Sbjct: 4069 CTEDGRIKVFQWGLPRWSLGLGEVYTWGDNDEGQLGDGTTNAIQRP 4114



 Score =  105 bits (263), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 65/202 (32%), Positives = 110/202 (54%), Gaps = 9/202 (4%)

Query: 271 VVQIAAGPS--YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTF--RRKGIHVV 326
           +V++AA P   + LA++ NG V+S+G G    LGHG+     +P  I  F  ++ G HVV
Sbjct: 458 MVKLAAHPDGQHYLALSSNGEVFSWGCGDGGRLGHGDTTYLEEPTMIAAFNGKQAGKHVV 517

Query: 327 RVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVC--ARK 384
            ++ G  +  A+   G +YTWG+G  G LGHG   D+T P  +++LK    V V   +  
Sbjct: 518 HIACGSTYSAAITVDGELYTWGRGNYGRLGHGSSEDQTTPMLVTALKGLKVVDVACGSGD 577

Query: 385 RKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV 444
            +T  + + G V+ +G   +G LG   RG SD    P++++ L+   + ++  G   +V 
Sbjct: 578 AQTLAVTENGQVWSWGDGDYGKLG---RGGSDGCKTPKLVEKLQDLDIVKVCCGSQFSVA 634

Query: 445 VTDRGRLFGFGDNERAQLGHDT 466
           +T  G+++ +G  +  +LGH T
Sbjct: 635 LTKDGQVYTWGKGDNQRLGHGT 656



 Score =  102 bits (255), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 84/279 (30%), Positives = 131/279 (46%), Gaps = 17/279 (6%)

Query: 119 GRYHTLLISNSSVFSCGSSLCGVLGHG-----PETTQCVSFTRINFPSAAHVVQVSASEN 173
           G+++  L SN  VFS G    G LGHG      E T   +F      +  HVV ++    
Sbjct: 467 GQHYLALSSNGEVFSWGCGDGGRLGHGDTTYLEEPTMIAAFN--GKQAGKHVVHIACGST 524

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
           ++A +   G+++T G  +    GH  +      P LV ALKG+    V  G      L +
Sbjct: 525 YSAAITVDGELYTWGRGNYGRLGHGSSEDQT-TPMLVTALKGLKVVDVACGSGDAQTLAV 583

Query: 234 --RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
              G V + G   +G+LG G +    TPK +  L+++  +V++  G  + +A+T +G VY
Sbjct: 584 TENGQVWSWGDGDYGKLGRGGSDGCKTPKLVEKLQDL-DIVKVCCGSQFSVALTKDGQVY 642

Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 351
           ++G G N  LGHG       P+ + T   +G  VV V+ G  H +AL   G V++WG   
Sbjct: 643 TWGKGDNQRLGHGTDEHVRFPKLLDTL--QGKKVVDVAVGSTHCLALTDDGEVHSWGSN- 699

Query: 352 CGALGHGDEI--DKTLPEPLSSLKSHLAVQVCARKRKTF 388
              L H D +  +K  P+ L  L S   V +     ++F
Sbjct: 700 -DKLQHFDTLFSNKKQPKALPGLNSKHIVGISCGPGQSF 737



 Score =  101 bits (252), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 75/247 (30%), Positives = 126/247 (51%), Gaps = 12/247 (4%)

Query: 235  GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
            G ++  G N  GQLG   G  +  PTP +++A L  V    Q+  G   + AVT +G +Y
Sbjct: 3757 GTIYGWGHNHRGQLGGIEGAKVKVPTPTEALATLRPV----QLIGGEQTLFAVTADGKLY 3812

Query: 292  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 351
            + G G+   LG G       P  +++ +   I  V V++G +H +AL S G VY+WG+  
Sbjct: 3813 ATGYGAGGRLGIGGTESVSTPTLLESIQHVFIRKVAVNSGGKHCLALSSEGEVYSWGEAE 3872

Query: 352  CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 411
             G LGHG+      P  + SL+    V + A    +  +  +G ++ +G   +G LG   
Sbjct: 3873 DGKLGHGNRSPCDRPRVIESLRGVEVVDIAAGGAHSACITASGELFTWGKGRYGRLG--- 3929

Query: 412  RGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG 469
             G S+  L+P+++D+L+ H V  ++  +G   T+ +TD   ++ +GD +  +LG     G
Sbjct: 3930 HGDSEDQLKPKLVDALQGHRVIDVACGSGDAQTLCLTDDDMVWSWGDGDYGKLGRGGSDG 3989

Query: 470  CLEPTEI 476
            C  P +I
Sbjct: 3990 CKTPMKI 3996



 Score = 99.8 bits (247), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 79/242 (32%), Positives = 114/242 (47%), Gaps = 7/242 (2%)

Query: 119  GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
            GR+   L  +  VFS G    G LGH      C     I    A  +  ++   +H+A +
Sbjct: 2827 GRHAMALTVDGKVFSWGEGDDGKLGHFSRMN-CDKPRLIEALKAKRIRDIACGSSHSAAI 2885

Query: 179  LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN--FTGFLTIRGH 236
              SG++++ G       GH D N    RP+LV+ L G    QV  G     T  LT  G 
Sbjct: 2886 TSSGELYSWGLGEYGRLGHGD-NTTQLRPKLVKVLLGHRVIQVACGSRDAQTLALTDEGL 2944

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 296
            V + G    G+LG G +     P++I  L   G V QI  G  + LA+T +GVV+++G G
Sbjct: 2945 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTWGKG 3003

Query: 297  SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 356
              F LGHG      +P+ ++  R  G  +V V+ G  H +A+  +G VY WG    G  G
Sbjct: 3004 DYFRLGHGTDVHVRKPQMVEGLR--GKKIVHVAVGALHCLAVTDTGQVYAWGDNDHGQQG 3061

Query: 357  HG 358
            +G
Sbjct: 3062 NG 3063



 Score = 68.2 bits (165), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 67/225 (29%), Positives = 100/225 (44%), Gaps = 8/225 (3%)

Query: 116  ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
            I  G  H+  I++S  ++S G    G LGHG  TTQ +    +       V+QV+     
Sbjct: 2875 IACGSSHSAAITSSGELYSWGLGEYGRLGHGDNTTQ-LRPKLVKVLLGHRVIQVACGSRD 2933

Query: 175  AA--FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            A    +   G VF+ GD      G R  +     P+ +E L G    Q+  G  F+  LT
Sbjct: 2934 AQTLALTDEGLVFSWGDGDFGKLG-RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALT 2992

Query: 233  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
              G V T G   + +LGHG  +    P+ +  L     +V +A G  + LAVT  G VY+
Sbjct: 2993 KSGVVWTWGKGDYFRLGHGTDVHVRKPQMVEGLRG-KKIVHVAVGALHCLAVTDTGQVYA 3051

Query: 293  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
            +G   +   G+G      +P  +Q    +G  + RV+ G  H VA
Sbjct: 3052 WGDNDHGQQGNGTTTVNRKPTLVQGL--EGQKITRVACGSSHSVA 3094



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 54/210 (25%), Positives = 93/210 (44%), Gaps = 21/210 (10%)

Query: 271 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 330
           V QI       L ++ +G VY+     N+      +   L P  I +   + +  +    
Sbjct: 416 VTQIVCSEKGFLILSSSGAVYT----QNY------KSTTLAPMLIHSLSSRKMVKLAAHP 465

Query: 331 GDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK-----SHLAVQVCARKR 385
             +H +AL S+G V++WG G  G LGHGD      P  +++        H+    C    
Sbjct: 466 DGQHYLALSSNGEVFSWGCGDGGRLGHGDTTYLEEPTMIAAFNGKQAGKHVVHIACGSTY 525

Query: 386 KTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTV 443
              + VD G +Y +G   +G LG    G S+    P ++ +L+   V  ++  +G   T+
Sbjct: 526 SAAITVD-GELYTWGRGNYGRLG---HGSSEDQTTPMLVTALKGLKVVDVACGSGDAQTL 581

Query: 444 VVTDRGRLFGFGDNERAQLGHDTLRGCLEP 473
            VT+ G+++ +GD +  +LG     GC  P
Sbjct: 582 AVTENGQVWSWGDGDYGKLGRGGSDGCKTP 611



 Score = 52.0 bits (123), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 36/147 (24%), Positives = 71/147 (48%), Gaps = 5/147 (3%)

Query: 332  DEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 391
            D+  ++   SG +Y WG  + G LG  +     +P P  +L +   VQ+   ++  F + 
Sbjct: 3747 DDWTLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPTEALATLRPVQLIGGEQTLFAVT 3806

Query: 392  DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRG 449
              G +Y     G+G+ G    G ++ V  P +L+S++   + +++  +G  H + ++  G
Sbjct: 3807 ADGKLYA---TGYGAGGRLGIGGTESVSTPTLLESIQHVFIRKVAVNSGGKHCLALSSEG 3863

Query: 450  RLFGFGDNERAQLGHDTLRGCLEPTEI 476
             ++ +G+ E  +LGH     C  P  I
Sbjct: 3864 EVYSWGEAEDGKLGHGNRSPCDRPRVI 3890


>gi|449476139|ref|XP_004154652.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein
           LOC101226798 [Cucumis sativus]
          Length = 1103

 Score =  131 bits (329), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 97/325 (29%), Positives = 157/325 (48%), Gaps = 22/325 (6%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V  ++    HAA V + G+VF+ G+      GH   +     P+L++AL  +  + V  G
Sbjct: 310 VQNIACGNRHAALVTKQGEVFSWGEEYGGRLGH-GGDSDAHHPKLIDALSNLNIELVACG 368

Query: 225 LNFTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSYM 281
              T  +T+ G ++T G  T+  G LGHG  +    PK +  PL+ +  +  I+ GP + 
Sbjct: 369 EYHTCAVTLSGDLYTWGDGTYNSGLLGHGKDVSHWVPKRVTGPLQGL-HISSISCGPWHT 427

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL--- 338
             VT  G +++FG G+   LGHG++     PR +++   KG+  VR + G  H  A+   
Sbjct: 428 ALVTSAGKLFTFGDGTFGVLGHGDRDSISIPREVESL--KGLRTVRAACGVWHTAAVVEV 485

Query: 339 ---------DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFV 389
                    +SSG ++TWG G  G LGHGD+  + +P  +++L      QV      T  
Sbjct: 486 IIGNPNSNNNSSGKLFTWGDGDKGRLGHGDKEARLVPTCVAALVEPNFCQVACGHSLTVA 545

Query: 390 LVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRG 449
           L ++G +Y  G   +G LG P    +D  L  R+   L    V +++ G YH  V+T R 
Sbjct: 546 LTNSGHIYTMGSPVYGQLGNPQ---ADGKLPARVEGKLSKSFVEELACGAYHVAVLTSRT 602

Query: 450 RLFGFGDNERAQLGHDTLRGCLEPT 474
            ++ +G     +LGH +      PT
Sbjct: 603 EVYTWGKGANGRLGHGSTDDRNTPT 627



 Score =  109 bits (272), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 87/274 (31%), Positives = 127/274 (46%), Gaps = 21/274 (7%)

Query: 116 ITTGRYHTLLISNSS---VFSCGSSLCGVLGHGPETTQCVSFTRINFP-SAAHVVQVSAS 171
           +  G YHT  ++ S     +  G+   G+LGHG + +  V   R+  P    H+  +S  
Sbjct: 365 VACGEYHTCAVTLSGDLYTWGDGTYNSGLLGHGKDVSHWVP-KRVTGPLQGLHISSISCG 423

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
             H A V  +G++FT GD +    GH D +  I  PR VE+LKG+   +   G+  T  +
Sbjct: 424 PWHTALVTSAGKLFTFGDGTFGVLGHGDRD-SISIPREVESLKGLRTVRAACGVWHTAAV 482

Query: 232 T------------IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPS 279
                          G + T G    G+LGHGD   R  P  +A L E  +  Q+A G S
Sbjct: 483 VEVIIGNPNSNNNSSGKLFTWGDGDKGRLGHGDKEARLVPTCVAALVEP-NFCQVACGHS 541

Query: 280 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 339
             +A+T +G +Y+ GS     LG+ +   +L  R      +    V  ++ G  HV  L 
Sbjct: 542 LTVALTNSGHIYTMGSPVYGQLGNPQADGKLPARVEGKLSKS--FVEELACGAYHVAVLT 599

Query: 340 SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
           S   VYTWGKG  G LGHG   D+  P  + +LK
Sbjct: 600 SRTEVYTWGKGANGRLGHGSTDDRNTPTLVEALK 633



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 78/295 (26%), Positives = 138/295 (46%), Gaps = 25/295 (8%)

Query: 207 PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 266
           P+ +E++  +  + +  G      +T +G V + G    G+LGHG   D   PK I  L 
Sbjct: 299 PKALESVVVLDVQNIACGNRHAALVTKQGEVFSWGEEYGGRLGHGGDSDAHHPKLIDALS 358

Query: 267 EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS--NFCLGHGEQHDELQPRAIQTFRRKGIH 324
            + ++  +A G  +  AVT +G +Y++G G+  +  LGHG+      P+ + T   +G+H
Sbjct: 359 NL-NIELVACGEYHTCAVTLSGDLYTWGDGTYNSGLLGHGKDVSHWVPKRV-TGPLQGLH 416

Query: 325 VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARK 384
           +  +S G  H   + S+G ++T+G G  G LGHGD    ++P  + SLK    V+     
Sbjct: 417 ISSISCGPWHTALVTSAGKLFTFGDGTFGVLGHGDRDSISIPREVESLKGLRTVRAACGV 476

Query: 385 RKTFVLVDT------------GSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHV 432
             T  +V+             G ++ +G    G LG  D+   +  L P  + +L   + 
Sbjct: 477 WHTAAVVEVIIGNPNSNNNSSGKLFTWGDGDKGRLGHGDK---EARLVPTCVAALVEPNF 533

Query: 433 SQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEP------TEIFIQEM 481
            Q++ G   TV +T+ G ++  G     QLG+    G L        ++ F++E+
Sbjct: 534 CQVACGHSLTVALTNSGHIYTMGSPVYGQLGNPQADGKLPARVEGKLSKSFVEEL 588



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 93/357 (26%), Positives = 150/357 (42%), Gaps = 31/357 (8%)

Query: 105 DIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAH 164
           D+   + GN      R+  L+     VFS G    G LGHG + +       I+  S  +
Sbjct: 309 DVQNIACGN------RHAALVTKQGEVFSWGEEYGGRLGHGGD-SDAHHPKLIDALSNLN 361

Query: 165 VVQVSASENHAAFVLQSGQVFTCGD---NSSFCCGHRDTNRPIFRPRLVEALKGVPCKQV 221
           +  V+  E H   V  SG ++T GD   NS      +D +  + + R+   L+G+    +
Sbjct: 362 IELVACGEYHTCAVTLSGDLYTWGDGTYNSGLLGHGKDVSHWVPK-RVTGPLQGLHISSI 420

Query: 222 TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 281
           + G   T  +T  G + T G  T G LGHGD      P+ +  L+ +   V+ A G  + 
Sbjct: 421 SCGPWHTALVTSAGKLFTFGDGTFGVLGHGDRDSISIPREVESLKGL-RTVRAACGVWHT 479

Query: 282 LAVT------------GNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS 329
            AV              +G ++++G G    LGHG++   L P  +        +  +V+
Sbjct: 480 AAVVEVIIGNPNSNNNSSGKLFTWGDGDKGRLGHGDKEARLVPTCVAALVEP--NFCQVA 537

Query: 330 AGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLS-SLKSHLAVQVCARKRKTF 388
            G    VAL +SG++YT G    G LG+  + D  LP  +   L      ++        
Sbjct: 538 CGHSLTVALTNSGHIYTMGSPVYGQLGN-PQADGKLPARVEGKLSKSFVEELACGAYHVA 596

Query: 389 VLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVV 445
           VL     VY +G    G LG    G +D    P ++++L+   V  I+ G   T  +
Sbjct: 597 VLTSRTEVYTWGKGANGRLG---HGSTDDRNTPTLVEALKDKQVKSIACGTNFTAAI 650



 Score = 73.2 bits (178), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 56/172 (32%), Positives = 89/172 (51%), Gaps = 8/172 (4%)

Query: 308 DELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPE 367
           D L P+A+++     + V  ++ G+ H   +   G V++WG+ Y G LGHG + D   P+
Sbjct: 295 DSLLPKALESVVV--LDVQNIACGNRHAALVTKQGEVFSWGEEYGGRLGHGGDSDAHHPK 352

Query: 368 PLSSLKSHLAVQVCA-RKRKTFVLVDTGSVY--GFGWMGFGSLGFPDRGVSDKVLRPRIL 424
            + +L S+L +++ A  +  T  +  +G +Y  G G    G LG   + VS  V + R+ 
Sbjct: 353 LIDAL-SNLNIELVACGEYHTCAVTLSGDLYTWGDGTYNSGLLGH-GKDVSHWVPK-RVT 409

Query: 425 DSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 476
             L+  H+S IS G +HT +VT  G+LF FGD     LGH        P E+
Sbjct: 410 GPLQGLHISSISCGPWHTALVTSAGKLFTFGDGTFGVLGHGDRDSISIPREV 461



 Score = 48.5 bits (114), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 51/194 (26%), Positives = 85/194 (43%), Gaps = 12/194 (6%)

Query: 92  RVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQC 151
           R +R    V H++ +VE       +  G  ++   S+  +F+ G    G LGHG +  + 
Sbjct: 468 RTVRAACGVWHTAAVVE-------VIIGNPNSNNNSSGKLFTWGDGDKGRLGHGDKEARL 520

Query: 152 VSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVE 211
           V  T +      +  QV+   +    +  SG ++T G       G+   +  +  P  VE
Sbjct: 521 VP-TCVAALVEPNFCQVACGHSLTVALTNSGHIYTMGSPVYGQLGNPQADGKL--PARVE 577

Query: 212 A-LKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS 270
             L     +++  G      LT R  V+T G   +G+LGHG T DR TP  +  L++   
Sbjct: 578 GKLSKSFVEELACGAYHVAVLTSRTEVYTWGKGANGRLGHGSTDDRNTPTLVEALKD-KQ 636

Query: 271 VVQIAAGPSYMLAV 284
           V  IA G ++  A+
Sbjct: 637 VKSIACGTNFTAAI 650



 Score = 42.0 bits (97), Expect = 0.72,   Method: Compositional matrix adjust.
 Identities = 27/97 (27%), Positives = 45/97 (46%), Gaps = 3/97 (3%)

Query: 360 EIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVL 419
           +ID  LP+ L S+       +    R   ++   G V+ +G    G LG    G      
Sbjct: 293 KIDSLLPKALESVVVLDVQNIACGNRHAALVTKQGEVFSWGEEYGGRLG---HGGDSDAH 349

Query: 420 RPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGD 456
            P+++D+L   ++  ++ G YHT  VT  G L+ +GD
Sbjct: 350 HPKLIDALSNLNIELVACGEYHTCAVTLSGDLYTWGD 386



 Score = 39.7 bits (91), Expect = 3.9,   Method: Compositional matrix adjust.
 Identities = 34/124 (27%), Positives = 58/124 (46%), Gaps = 3/124 (2%)

Query: 115 QITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
           Q+  G   T+ ++NS  +++ GS + G LG+ P+    +        S + V +++    
Sbjct: 535 QVACGHSLTVALTNSGHIYTMGSPVYGQLGN-PQADGKLPARVEGKLSKSFVEELACGAY 593

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
           H A +    +V+T G  ++   GH  T+     P LVEALK    K +  G NFT  + +
Sbjct: 594 HVAVLTSRTEVYTWGKGANGRLGHGSTD-DRNTPTLVEALKDKQVKSIACGTNFTAAICL 652

Query: 234 RGHV 237
              V
Sbjct: 653 HKWV 656


>gi|431911482|gb|ELK13688.1| Putative E3 ubiquitin-protein ligase HERC3 [Pteropus alecto]
          Length = 1017

 Score =  131 bits (329), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 93/276 (33%), Positives = 141/276 (51%), Gaps = 10/276 (3%)

Query: 204 IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 263
           +  P++   +     K+V  G N + FL   G V+TCG NT GQLGH    ++P  + I 
Sbjct: 69  VAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGNKP--EQIG 126

Query: 264 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQ-PRAIQTFRRKG 322
            L +  ++V +A G S+ LA++  G ++S+G+GS+  LG     D +  PR IQ   ++ 
Sbjct: 127 ALAD-QNIVHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQT 185

Query: 323 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEI-DKTLPEPLSSLKSHLAVQVC 381
           I  ++VS G+ H +AL + G  +TWGK   G LG G E   +  P+ + SL+     QV 
Sbjct: 186 I--LQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVA 243

Query: 382 ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYH 441
           A    +F L  +G+V+ +G    G LG  D    +    P  +  LR   V  IS G  H
Sbjct: 244 AGGAHSFALSLSGAVFAWGMNNAGQLGLSDEEDRES---PCHVKLLRTQKVVYISCGEEH 300

Query: 442 TVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF 477
           T V+T  G +F FG     QLGHD++   + P  + 
Sbjct: 301 TAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVL 336



 Score =  128 bits (321), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 98/309 (31%), Positives = 159/309 (51%), Gaps = 14/309 (4%)

Query: 159 FPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVP 217
           F S   V +V+   NH+ F+L+ G+V+TCG N+    GH R+ N+P      + AL    
Sbjct: 77  FISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGNKP----EQIGALADQN 132

Query: 218 CKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDR-PTPKSIAPLEEVGSVVQIAA 276
              V  G + +  L+ RG + + G+ + GQLG   T D    P+ I  L +  +++Q++ 
Sbjct: 133 IVHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQ-QTILQVSC 191

Query: 277 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH-DELQPRAIQTFRRKGIHVVRVSAGDEHV 335
           G  + LA+  +G  +++G  S+  LG G++   +  P+ +++   +GI + +V+AG  H 
Sbjct: 192 GNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSL--EGIPLAQVAAGGAHS 249

Query: 336 VALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGS 395
            AL  SG V+ WG    G LG  DE D+  P  +  L++   V +   +  T VL  +G 
Sbjct: 250 FALSLSGAVFAWGMNNAGQLGLSDEEDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGG 309

Query: 396 VYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV-VTDRGRLFGF 454
           V+ FG    G LG     ++D+V  PR +  L    V+QI+ G  HT+  V   G ++ F
Sbjct: 310 VFTFGAGSCGQLG--HDSMNDEV-NPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAF 366

Query: 455 GDNERAQLG 463
           G   R QLG
Sbjct: 367 GCGARGQLG 375



 Score =  122 bits (307), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 94/320 (29%), Positives = 151/320 (47%), Gaps = 11/320 (3%)

Query: 119 GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
           G +   L+ +  V++CG +  G LGH  E  +     +I   +  ++V V+  E+H+  +
Sbjct: 90  GNHSVFLLEDGEVYTCGLNTKGQLGHEREGNKP---EQIGALADQNIVHVACGESHSLAL 146

Query: 179 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVH 238
              GQ+F+ G  S    G   T   +  PRL++ L      QV+ G      L   G   
Sbjct: 147 SDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFF 206

Query: 239 TCGSNTHGQLGHGDTL-DRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 297
           T G N+HGQLG G     + +P+ +  LE +  + Q+AAG ++  A++ +G V+++G  +
Sbjct: 207 TWGKNSHGQLGLGKEFPSQASPQRVRSLEGI-PLAQVAAGGAHSFALSLSGAVFAWGMNN 265

Query: 298 NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 357
              LG  ++ D   P  ++  R +   VV +S G+EH   L  SG V+T+G G CG LGH
Sbjct: 266 AGQLGLSDEEDRESPCHVKLLRTQ--KVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGH 323

Query: 358 GDEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSD 416
               D+  P  +  L      Q+ C R+     +  +G +Y FG    G LG    G + 
Sbjct: 324 DSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLG---TGHTC 380

Query: 417 KVLRPRILDSLRAHHVSQIS 436
            V  P  +    A H  Q+S
Sbjct: 381 NVKCPSPVKGYWAAHNGQLS 400



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 91/295 (30%), Positives = 136/295 (46%), Gaps = 22/295 (7%)

Query: 114 MQITTGRYHTLLISN-SSVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSAS 171
           + +  G  H+L +S+   +FS G+   G LG    T   V+  R I   +   ++QVS  
Sbjct: 134 VHVACGESHSLALSDRGQLFSWGAGSDGQLGLM-TTEDSVAVPRLIQKLNQQTILQVSCG 192

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
             H   +   GQ FT G NS    G          P+ V +L+G+P  QV AG   +  L
Sbjct: 193 NWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFAL 252

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
           ++ G V   G N  GQLG  D  DR +P  +  L     VV I+ G  +   +T +G V+
Sbjct: 253 SLSGAVFAWGMNNAGQLGLSDEEDRESPCHVK-LLRTQKVVYISCGEEHTAVLTKSGGVF 311

Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA-LDSSGYVYTWGKG 350
           +FG+GS   LGH   +DE+ PR +      G  V +++ G +H +A + SSG +Y +G G
Sbjct: 312 TFGAGSCGQLGHDSMNDEVNPRRV--LELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCG 369

Query: 351 YCGALGHGDEIDKTLPEPLSS---------------LKSHLAVQVCARKRKTFVL 390
             G LG G   +   P P+                  K H+  Q+ +   +TFVL
Sbjct: 370 ARGQLGTGHTCNVKCPSPVKGYWAAHNGQLSARADRFKYHIVKQIFSGGDQTFVL 424


>gi|350587982|ref|XP_003129374.3| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 [Sus scrofa]
          Length = 1050

 Score =  131 bits (329), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 96/301 (31%), Positives = 148/301 (49%), Gaps = 29/301 (9%)

Query: 193 FCCGHRDTNRP---------IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 243
            C G+    +P         +  P++   +     K+V  G + + FL   G V+TCG N
Sbjct: 2   LCWGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGDHSVFLLEDGEVYTCGLN 61

Query: 244 THGQLGHGDTLDRPTPKSIAPLEEVGS-----VVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
           T GQLGH    ++P        E++G+     +V +A G S+ LA++  G ++S+G+GS+
Sbjct: 62  TKGQLGHEREGNKP--------EQIGALADEHIVHVACGESHSLALSDRGQLFSWGAGSD 113

Query: 299 FCLGHGEQHDELQ-PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 357
             LG     + +  PR IQ   ++ I  ++VS G+ H +AL + G  +TWGK   G LG 
Sbjct: 114 GQLGLMTTEESVAVPRLIQKLNQQTI--LQVSCGNWHCLALAADGQFFTWGKNSHGQLGL 171

Query: 358 GDEI-DKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSD 416
           G E   +  P+ + SL+     QV A    +F L  +G+V+G+G    G LG  D    +
Sbjct: 172 GKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEEDRE 231

Query: 417 KVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 476
               P  +  LRA  V  IS G  HT V+T  G +F FG     QLGHD++   + P  +
Sbjct: 232 S---PCHVKLLRAQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRV 288

Query: 477 F 477
            
Sbjct: 289 L 289



 Score =  124 bits (312), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 95/320 (29%), Positives = 150/320 (46%), Gaps = 11/320 (3%)

Query: 119 GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
           G +   L+ +  V++CG +  G LGH  E  +     +I   +  H+V V+  E+H+  +
Sbjct: 43  GDHSVFLLEDGEVYTCGLNTKGQLGHEREGNKP---EQIGALADEHIVHVACGESHSLAL 99

Query: 179 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVH 238
              GQ+F+ G  S    G   T   +  PRL++ L      QV+ G      L   G   
Sbjct: 100 SDRGQLFSWGAGSDGQLGLMTTEESVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFF 159

Query: 239 TCGSNTHGQLGHGDTL-DRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 297
           T G N+HGQLG G     + +P+ +  LE +  + Q+AAG ++  A++ +G V+ +G  +
Sbjct: 160 TWGKNSHGQLGLGKEFPSQASPQRVRSLEGI-PLAQVAAGGAHSFALSLSGAVFGWGMNN 218

Query: 298 NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 357
              LG  ++ D   P  ++  R +   VV +S G+EH   L  SG V+T+G G CG LGH
Sbjct: 219 AGQLGLSDEEDRESPCHVKLLRAQ--KVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGH 276

Query: 358 GDEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSD 416
               D+  P  +  L      Q+ C R+     +  +G +Y FG    G LG    G + 
Sbjct: 277 DSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLG---TGHTC 333

Query: 417 KVLRPRILDSLRAHHVSQIS 436
            V  P  +    A H  Q+S
Sbjct: 334 NVKCPSPVKGYWAAHSGQLS 353



 Score =  122 bits (307), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 96/309 (31%), Positives = 159/309 (51%), Gaps = 14/309 (4%)

Query: 159 FPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVP 217
           F S   V +V+   +H+ F+L+ G+V+TCG N+    GH R+ N+P      + AL    
Sbjct: 30  FISDRSVKEVACGGDHSVFLLEDGEVYTCGLNTKGQLGHEREGNKP----EQIGALADEH 85

Query: 218 CKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDR-PTPKSIAPLEEVGSVVQIAA 276
              V  G + +  L+ RG + + G+ + GQLG   T +    P+ I  L +  +++Q++ 
Sbjct: 86  IVHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEESVAVPRLIQKLNQ-QTILQVSC 144

Query: 277 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH-DELQPRAIQTFRRKGIHVVRVSAGDEHV 335
           G  + LA+  +G  +++G  S+  LG G++   +  P+ +++   +GI + +V+AG  H 
Sbjct: 145 GNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSL--EGIPLAQVAAGGAHS 202

Query: 336 VALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGS 395
            AL  SG V+ WG    G LG  DE D+  P  +  L++   V +   +  T VL  +G 
Sbjct: 203 FALSLSGAVFGWGMNNAGQLGLSDEEDRESPCHVKLLRAQKVVYISCGEEHTAVLTKSGG 262

Query: 396 VYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV-VTDRGRLFGF 454
           V+ FG    G LG     ++D+V  PR +  L    V+QI+ G  HT+  V   G ++ F
Sbjct: 263 VFTFGAGSCGQLG--HDSMNDEV-NPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAF 319

Query: 455 GDNERAQLG 463
           G   R QLG
Sbjct: 320 GCGARGQLG 328



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 91/295 (30%), Positives = 137/295 (46%), Gaps = 22/295 (7%)

Query: 114 MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSAS 171
           + +  G  H+L +S+   +FS G+   G LG    T + V+  R I   +   ++QVS  
Sbjct: 87  VHVACGESHSLALSDRGQLFSWGAGSDGQLGLM-TTEESVAVPRLIQKLNQQTILQVSCG 145

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
             H   +   GQ FT G NS    G          P+ V +L+G+P  QV AG   +  L
Sbjct: 146 NWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFAL 205

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
           ++ G V   G N  GQLG  D  DR +P  +  L     VV I+ G  +   +T +G V+
Sbjct: 206 SLSGAVFGWGMNNAGQLGLSDEEDRESPCHVKLLR-AQKVVYISCGEEHTAVLTKSGGVF 264

Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA-LDSSGYVYTWGKG 350
           +FG+GS   LGH   +DE+ PR +      G  V +++ G +H +A + SSG +Y +G G
Sbjct: 265 TFGAGSCGQLGHDSMNDEVNPRRV--LELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCG 322

Query: 351 YCGALGHGDEIDKTLPEPLS---------------SLKSHLAVQVCARKRKTFVL 390
             G LG G   +   P P+                  K H+  Q+ +   +TFVL
Sbjct: 323 ARGQLGTGHTCNVKCPSPVKGYWAAHSGQLSARADRFKYHIVKQIFSGGDQTFVL 377


>gi|387193358|gb|AFJ68699.1| hypothetical protein NGATSA_3056200, partial [Nannochloropsis
           gaditana CCMP526]
          Length = 511

 Score =  131 bits (329), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 94/309 (30%), Positives = 147/309 (47%), Gaps = 13/309 (4%)

Query: 83  LNRCNGNWKRVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLISNS-SVFSCGSSLCGV 141
           L   + +WK V   + ++        T     Q+T G YHT  IS++ ++++ G  + G 
Sbjct: 71  LGHADNHWKYVPHLVSAL--------TGKSIKQVTCGSYHTAAISDTGALWTWGGGMYGK 122

Query: 142 LGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTN 201
           LGHG E        R+       V Q++    H A +L  G+V+  GD  +  CG  +  
Sbjct: 123 LGHGNEVGHPAP-CRVEAFIGREVEQIACGSRHTAALLAGGEVYCWGDRENGVCGIGEAA 181

Query: 202 RPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKS 261
              + P+ +EALKGV   Q+ A    T  +T  G + + G    G+LG G+  ++ TP  
Sbjct: 182 EHQYLPKKLEALKGVKITQIAACGFHTAAITQDGALWSWGEGKFGRLGQGNEKNQVTPCC 241

Query: 262 IAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRK 321
           +  L+ V  V Q+A G  +   VT +G V +FG G +  LGHG++ +   P  ++     
Sbjct: 242 VEGLQGV-RVKQVACGGFHSACVTEDGDVLTFGGGEHGQLGHGDKTNRTVPCLVKALEGA 300

Query: 322 GIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVC 381
           GI  V+V+ G  H V L   G V+T+G G  G LGHG      LP+ + SL +    +V 
Sbjct: 301 GI--VQVTCGWSHTVTLSEDGKVFTFGNGDHGKLGHGANAKSALPKLVESLANMKVAKVA 358

Query: 382 ARKRKTFVL 390
           +    T  L
Sbjct: 359 SYNEHTVAL 367



 Score =  131 bits (329), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 90/303 (29%), Positives = 150/303 (49%), Gaps = 12/303 (3%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           VVQ++    H   + +   V++ G       GH D N   + P LV AL G   KQVT G
Sbjct: 41  VVQIACGSGHTVVLTEDKDVWSWGRGDDGRLGHAD-NHWKYVPHLVSALTGKSIKQVTCG 99

Query: 225 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG-SVVQIAAGPSYMLA 283
              T  ++  G + T G   +G+LGHG+ +  P P  +     +G  V QIA G  +  A
Sbjct: 100 SYHTAAISDTGALWTWGGGMYGKLGHGNEVGHPAPCRVEAF--IGREVEQIACGSRHTAA 157

Query: 284 VTGNGVVYSFGSGSNFCLGHGE--QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 341
           +   G VY +G   N   G GE  +H  L P+ ++    KG+ + +++A   H  A+   
Sbjct: 158 LLAGGEVYCWGDRENGVCGIGEAAEHQYL-PKKLEAL--KGVKITQIAACGFHTAAITQD 214

Query: 342 GYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGW 401
           G +++WG+G  G LG G+E ++  P  +  L+     QV      +  + + G V  FG 
Sbjct: 215 GALWSWGEGKFGRLGQGNEKNQVTPCCVEGLQGVRVKQVACGGFHSACVTEDGDVLTFGG 274

Query: 402 MGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQ 461
              G LG  D+  +++ + P ++ +L    + Q++ G  HTV +++ G++F FG+ +  +
Sbjct: 275 GEHGQLGHGDK--TNRTV-PCLVKALEGAGIVQVTCGWSHTVTLSEDGKVFTFGNGDHGK 331

Query: 462 LGH 464
           LGH
Sbjct: 332 LGH 334



 Score =  116 bits (290), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 100/358 (27%), Positives = 170/358 (47%), Gaps = 19/358 (5%)

Query: 114 MQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +QI  G  HT++++ +  V+S G    G LGH     + V    ++  +   + QV+   
Sbjct: 42  VQIACGSGHTVVLTEDKDVWSWGRGDDGRLGHADNHWKYVPHL-VSALTGKSIKQVTCGS 100

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
            H A +  +G ++T G       GH  +   P   P  VEA  G   +Q+  G   T  L
Sbjct: 101 YHTAAISDTGALWTWGGGMYGKLGHGNEVGHPA--PCRVEAFIGREVEQIACGSRHTAAL 158

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLD-RPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 290
              G V+  G   +G  G G+  + +  PK +  L+ V  + QIAA   +  A+T +G +
Sbjct: 159 LAGGEVYCWGDRENGVCGIGEAAEHQYLPKKLEALKGV-KITQIAACGFHTAAITQDGAL 217

Query: 291 YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKG 350
           +S+G G    LG G + +++ P  ++    +G+ V +V+ G  H   +   G V T+G G
Sbjct: 218 WSWGEGKFGRLGQGNEKNQVTPCCVEGL--QGVRVKQVACGGFHSACVTEDGDVLTFGGG 275

Query: 351 YCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFP 410
             G LGHGD+ ++T+P  + +L+    VQV      T  L + G V+ FG    G LG  
Sbjct: 276 EHGQLGHGDKTNRTVPCLVKALEGAGIVQVTCGWSHTVTLSEDGKVFTFGNGDHGKLG-- 333

Query: 411 DRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLR 468
             G + K   P++++SL    V+++++   HTV +          + E+A +  D L+
Sbjct: 334 -HGANAKSALPKLVESLANMKVAKVASYNEHTVALC-------HAEQEQAVMSFDFLK 383



 Score =  111 bits (278), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 82/282 (29%), Positives = 131/282 (46%), Gaps = 8/282 (2%)

Query: 184 VFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 243
           +++ G      CG+  TN     P  VE LK +   Q+  G   T  LT    V + G  
Sbjct: 8   LYSWGRGEDGQCGNGSTNDQEM-PMPVEGLKHLTVVQIACGSGHTVVLTEDKDVWSWGRG 66

Query: 244 THGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH 303
             G+LGH D   +  P  ++ L    S+ Q+  G  +  A++  G ++++G G    LGH
Sbjct: 67  DDGRLGHADNHWKYVPHLVSALTGK-SIKQVTCGSYHTAAISDTGALWTWGGGMYGKLGH 125

Query: 304 GEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEID- 362
           G +     P  ++ F   G  V +++ G  H  AL + G VY WG    G  G G+  + 
Sbjct: 126 GNEVGHPAPCRVEAF--IGREVEQIACGSRHTAALLAGGEVYCWGDRENGVCGIGEAAEH 183

Query: 363 KTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPR 422
           + LP+ L +LK     Q+ A    T  +   G+++ +G   FG LG   +G     + P 
Sbjct: 184 QYLPKKLEALKGVKITQIAACGFHTAAITQDGALWSWGEGKFGRLG---QGNEKNQVTPC 240

Query: 423 ILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 464
            ++ L+   V Q++ G +H+  VT+ G +  FG  E  QLGH
Sbjct: 241 CVEGLQGVRVKQVACGGFHSACVTEDGDVLTFGGGEHGQLGH 282



 Score =  109 bits (273), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 67/237 (28%), Positives = 118/237 (49%), Gaps = 5/237 (2%)

Query: 237 VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 296
           +++ G    GQ G+G T D+  P  +  L+ + +VVQIA G  + + +T +  V+S+G G
Sbjct: 8   LYSWGRGEDGQCGNGSTNDQEMPMPVEGLKHL-TVVQIACGSGHTVVLTEDKDVWSWGRG 66

Query: 297 SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 356
            +  LGH + H +  P  +     K I   +V+ G  H  A+  +G ++TWG G  G LG
Sbjct: 67  DDGRLGHADNHWKYVPHLVSALTGKSIK--QVTCGSYHTAAISDTGALWTWGGGMYGKLG 124

Query: 357 HGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSD 416
           HG+E+    P  + +       Q+    R T  L+  G VY +G    G  G  +   ++
Sbjct: 125 HGNEVGHPAPCRVEAFIGREVEQIACGSRHTAALLAGGEVYCWGDRENGVCGIGE--AAE 182

Query: 417 KVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEP 473
               P+ L++L+   ++QI+   +HT  +T  G L+ +G+ +  +LG    +  + P
Sbjct: 183 HQYLPKKLEALKGVKITQIAACGFHTAAITQDGALWSWGEGKFGRLGQGNEKNQVTP 239



 Score = 76.3 bits (186), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 50/177 (28%), Positives = 85/177 (48%), Gaps = 5/177 (2%)

Query: 287 NGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYT 346
           + ++YS+G G +   G+G  +D+  P  ++  +   + VV+++ G  H V L     V++
Sbjct: 5   DSMLYSWGRGEDGQCGNGSTNDQEMPMPVEGLKH--LTVVQIACGSGHTVVLTEDKDVWS 62

Query: 347 WGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGS 406
           WG+G  G LGH D   K +P  +S+L      QV      T  + DTG+++ +G   +G 
Sbjct: 63  WGRGDDGRLGHADNHWKYVPHLVSALTGKSIKQVTCGSYHTAAISDTGALWTWGGGMYGK 122

Query: 407 LGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 463
           LG    G       P  +++     V QI+ G  HT  +   G ++ +GD E    G
Sbjct: 123 LG---HGNEVGHPAPCRVEAFIGREVEQIACGSRHTAALLAGGEVYCWGDRENGVCG 176



 Score = 69.7 bits (169), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 44/143 (30%), Positives = 70/143 (48%), Gaps = 6/143 (4%)

Query: 344 VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 403
           +Y+WG+G  G  G+G   D+ +P P+  LK    VQ+      T VL +   V+ +G   
Sbjct: 8   LYSWGRGEDGQCGNGSTNDQEMPMPVEGLKHLTVVQIACGSGHTVVLTEDKDVWSWGRGD 67

Query: 404 FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 463
            G LG  D   +     P ++ +L    + Q++ G YHT  ++D G L+ +G     +LG
Sbjct: 68  DGRLGHAD---NHWKYVPHLVSALTGKSIKQVTCGSYHTAAISDTGALWTWGGGMYGKLG 124

Query: 464 HDTLRGCLEP--TEIFI-QEMEE 483
           H    G   P   E FI +E+E+
Sbjct: 125 HGNEVGHPAPCRVEAFIGREVEQ 147


>gi|449442577|ref|XP_004139058.1| PREDICTED: uncharacterized protein LOC101219074 [Cucumis sativus]
          Length = 1103

 Score =  131 bits (329), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 97/325 (29%), Positives = 157/325 (48%), Gaps = 22/325 (6%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V  ++    HAA V + G+VF+ G+      GH   +     P+L++AL  +  + V  G
Sbjct: 310 VQNIACGNRHAALVTKQGEVFSWGEEYGGRLGH-GGDSDAHHPKLIDALSNLNIELVACG 368

Query: 225 LNFTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSYM 281
              T  +T+ G ++T G  T+  G LGHG  +    PK +  PL+ +  +  I+ GP + 
Sbjct: 369 EYHTCAVTLSGDLYTWGDGTYNSGLLGHGKDVSHWVPKRVTGPLQGL-HISSISCGPWHT 427

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL--- 338
             VT  G +++FG G+   LGHG++     PR +++   KG+  VR + G  H  A+   
Sbjct: 428 ALVTSAGKLFTFGDGTFGVLGHGDRDSISIPREVESL--KGLRTVRAACGVWHTAAVVEV 485

Query: 339 ---------DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFV 389
                    +SSG ++TWG G  G LGHGD+  + +P  +++L      QV      T  
Sbjct: 486 IIGNPNSNNNSSGKLFTWGDGDKGRLGHGDKEARLVPTCVAALVEPNFCQVACGHSLTVA 545

Query: 390 LVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRG 449
           L ++G +Y  G   +G LG P    +D  L  R+   L    V +++ G YH  V+T R 
Sbjct: 546 LTNSGHIYTMGSPVYGQLGNPQ---ADGKLPARVEGKLSKSFVEELACGAYHVAVLTSRT 602

Query: 450 RLFGFGDNERAQLGHDTLRGCLEPT 474
            ++ +G     +LGH +      PT
Sbjct: 603 EVYTWGKGANGRLGHGSTDDRNTPT 627



 Score =  108 bits (271), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 87/274 (31%), Positives = 127/274 (46%), Gaps = 21/274 (7%)

Query: 116 ITTGRYHTLLISNSS---VFSCGSSLCGVLGHGPETTQCVSFTRINFP-SAAHVVQVSAS 171
           +  G YHT  ++ S     +  G+   G+LGHG + +  V   R+  P    H+  +S  
Sbjct: 365 VACGEYHTCAVTLSGDLYTWGDGTYNSGLLGHGKDVSHWVP-KRVTGPLQGLHISSISCG 423

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
             H A V  +G++FT GD +    GH D +  I  PR VE+LKG+   +   G+  T  +
Sbjct: 424 PWHTALVTSAGKLFTFGDGTFGVLGHGDRD-SISIPREVESLKGLRTVRAACGVWHTAAV 482

Query: 232 T------------IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPS 279
                          G + T G    G+LGHGD   R  P  +A L E  +  Q+A G S
Sbjct: 483 VEVIIGNPNSNNNSSGKLFTWGDGDKGRLGHGDKEARLVPTCVAALVEP-NFCQVACGHS 541

Query: 280 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 339
             +A+T +G +Y+ GS     LG+ +   +L  R      +    V  ++ G  HV  L 
Sbjct: 542 LTVALTNSGHIYTMGSPVYGQLGNPQADGKLPARVEGKLSKS--FVEELACGAYHVAVLT 599

Query: 340 SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
           S   VYTWGKG  G LGHG   D+  P  + +LK
Sbjct: 600 SRTEVYTWGKGANGRLGHGSTDDRNTPTLVEALK 633



 Score = 93.2 bits (230), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 78/295 (26%), Positives = 138/295 (46%), Gaps = 25/295 (8%)

Query: 207 PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 266
           P+ +E++  +  + +  G      +T +G V + G    G+LGHG   D   PK I  L 
Sbjct: 299 PKALESVVVLDVQNIACGNRHAALVTKQGEVFSWGEEYGGRLGHGGDSDAHHPKLIDALS 358

Query: 267 EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS--NFCLGHGEQHDELQPRAIQTFRRKGIH 324
            + ++  +A G  +  AVT +G +Y++G G+  +  LGHG+      P+ + T   +G+H
Sbjct: 359 NL-NIELVACGEYHTCAVTLSGDLYTWGDGTYNSGLLGHGKDVSHWVPKRV-TGPLQGLH 416

Query: 325 VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARK 384
           +  +S G  H   + S+G ++T+G G  G LGHGD    ++P  + SLK    V+     
Sbjct: 417 ISSISCGPWHTALVTSAGKLFTFGDGTFGVLGHGDRDSISIPREVESLKGLRTVRAACGV 476

Query: 385 RKTFVLVDT------------GSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHV 432
             T  +V+             G ++ +G    G LG  D+   +  L P  + +L   + 
Sbjct: 477 WHTAAVVEVIIGNPNSNNNSSGKLFTWGDGDKGRLGHGDK---EARLVPTCVAALVEPNF 533

Query: 433 SQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEP------TEIFIQEM 481
            Q++ G   TV +T+ G ++  G     QLG+    G L        ++ F++E+
Sbjct: 534 CQVACGHSLTVALTNSGHIYTMGSPVYGQLGNPQADGKLPARVEGKLSKSFVEEL 588



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 93/357 (26%), Positives = 150/357 (42%), Gaps = 31/357 (8%)

Query: 105 DIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAH 164
           D+   + GN      R+  L+     VFS G    G LGHG + +       I+  S  +
Sbjct: 309 DVQNIACGN------RHAALVTKQGEVFSWGEEYGGRLGHGGD-SDAHHPKLIDALSNLN 361

Query: 165 VVQVSASENHAAFVLQSGQVFTCGD---NSSFCCGHRDTNRPIFRPRLVEALKGVPCKQV 221
           +  V+  E H   V  SG ++T GD   NS      +D +  + + R+   L+G+    +
Sbjct: 362 IELVACGEYHTCAVTLSGDLYTWGDGTYNSGLLGHGKDVSHWVPK-RVTGPLQGLHISSI 420

Query: 222 TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 281
           + G   T  +T  G + T G  T G LGHGD      P+ +  L+ +   V+ A G  + 
Sbjct: 421 SCGPWHTALVTSAGKLFTFGDGTFGVLGHGDRDSISIPREVESLKGL-RTVRAACGVWHT 479

Query: 282 LAVT------------GNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS 329
            AV              +G ++++G G    LGHG++   L P  +        +  +V+
Sbjct: 480 AAVVEVIIGNPNSNNNSSGKLFTWGDGDKGRLGHGDKEARLVPTCVAALVEP--NFCQVA 537

Query: 330 AGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLS-SLKSHLAVQVCARKRKTF 388
            G    VAL +SG++YT G    G LG+  + D  LP  +   L      ++        
Sbjct: 538 CGHSLTVALTNSGHIYTMGSPVYGQLGN-PQADGKLPARVEGKLSKSFVEELACGAYHVA 596

Query: 389 VLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVV 445
           VL     VY +G    G LG    G +D    P ++++L+   V  I+ G   T  +
Sbjct: 597 VLTSRTEVYTWGKGANGRLG---HGSTDDRNTPTLVEALKDKQVKSIACGTNFTAAI 650



 Score = 73.2 bits (178), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 56/172 (32%), Positives = 89/172 (51%), Gaps = 8/172 (4%)

Query: 308 DELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPE 367
           D L P+A+++     + V  ++ G+ H   +   G V++WG+ Y G LGHG + D   P+
Sbjct: 295 DSLLPKALESVVV--LDVQNIACGNRHAALVTKQGEVFSWGEEYGGRLGHGGDSDAHHPK 352

Query: 368 PLSSLKSHLAVQVCA-RKRKTFVLVDTGSVY--GFGWMGFGSLGFPDRGVSDKVLRPRIL 424
            + +L S+L +++ A  +  T  +  +G +Y  G G    G LG   + VS  V + R+ 
Sbjct: 353 LIDAL-SNLNIELVACGEYHTCAVTLSGDLYTWGDGTYNSGLLGH-GKDVSHWVPK-RVT 409

Query: 425 DSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 476
             L+  H+S IS G +HT +VT  G+LF FGD     LGH        P E+
Sbjct: 410 GPLQGLHISSISCGPWHTALVTSAGKLFTFGDGTFGVLGHGDRDSISIPREV 461



 Score = 48.5 bits (114), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 51/194 (26%), Positives = 85/194 (43%), Gaps = 12/194 (6%)

Query: 92  RVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQC 151
           R +R    V H++ +VE       +  G  ++   S+  +F+ G    G LGHG +  + 
Sbjct: 468 RTVRAACGVWHTAAVVE-------VIIGNPNSNNNSSGKLFTWGDGDKGRLGHGDKEARL 520

Query: 152 VSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVE 211
           V  T +      +  QV+   +    +  SG ++T G       G+   +  +  P  VE
Sbjct: 521 VP-TCVAALVEPNFCQVACGHSLTVALTNSGHIYTMGSPVYGQLGNPQADGKL--PARVE 577

Query: 212 A-LKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS 270
             L     +++  G      LT R  V+T G   +G+LGHG T DR TP  +  L++   
Sbjct: 578 GKLSKSFVEELACGAYHVAVLTSRTEVYTWGKGANGRLGHGSTDDRNTPTLVEALKD-KQ 636

Query: 271 VVQIAAGPSYMLAV 284
           V  IA G ++  A+
Sbjct: 637 VKSIACGTNFTAAI 650



 Score = 42.0 bits (97), Expect = 0.75,   Method: Compositional matrix adjust.
 Identities = 27/97 (27%), Positives = 45/97 (46%), Gaps = 3/97 (3%)

Query: 360 EIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVL 419
           +ID  LP+ L S+       +    R   ++   G V+ +G    G LG    G      
Sbjct: 293 KIDSLLPKALESVVVLDVQNIACGNRHAALVTKQGEVFSWGEEYGGRLG---HGGDSDAH 349

Query: 420 RPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGD 456
            P+++D+L   ++  ++ G YHT  VT  G L+ +GD
Sbjct: 350 HPKLIDALSNLNIELVACGEYHTCAVTLSGDLYTWGD 386



 Score = 39.3 bits (90), Expect = 4.1,   Method: Compositional matrix adjust.
 Identities = 34/124 (27%), Positives = 58/124 (46%), Gaps = 3/124 (2%)

Query: 115 QITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
           Q+  G   T+ ++NS  +++ GS + G LG+ P+    +        S + V +++    
Sbjct: 535 QVACGHSLTVALTNSGHIYTMGSPVYGQLGN-PQADGKLPARVEGKLSKSFVEELACGAY 593

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
           H A +    +V+T G  ++   GH  T+     P LVEALK    K +  G NFT  + +
Sbjct: 594 HVAVLTSRTEVYTWGKGANGRLGHGSTD-DRNTPTLVEALKDKQVKSIACGTNFTAAICL 652

Query: 234 RGHV 237
              V
Sbjct: 653 HKWV 656


>gi|390353202|ref|XP_789385.3| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like
           [Strongylocentrotus purpuratus]
          Length = 1070

 Score =  131 bits (329), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 104/355 (29%), Positives = 162/355 (45%), Gaps = 20/355 (5%)

Query: 130 SVFSCGSSL---CGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFT 186
           SVFS G +     G+ G G +     S   +   +   + ++S    H   +L+ G V  
Sbjct: 2   SVFSWGCTQDGQLGISGLGDDVPSLSSPREVPALAGKQIREISCGLRHTCVLLRDGTVMM 61

Query: 187 CGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHG 246
           CG N     G    +RP      V A + +   QV+ G + T  +T RG V   G N  G
Sbjct: 62  CGANDR---GQLGQDRPGSELAHVPATETLVITQVSCGNDHTLAVTDRGQVLGWGRNDRG 118

Query: 247 QLG--HGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHG 304
           Q G   GD+ D+  P+ +  L     V Q+A G  + +A+T +G ++++G  S   LG G
Sbjct: 119 QCGLSTGDSEDKRKPRFLKSLSSC-QVAQVACGSMHSMALTRDGRIFAWGDNSFGQLGIG 177

Query: 305 EQHDEL---QPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEI 361
                L    P+ + +    G+ + R++ G  H  AL  SG V+ WGK  CG LG G   
Sbjct: 178 APGRTLYRDHPQQLSSL--PGVPIRRLACGGWHSFALSVSGAVFGWGKNNCGQLGLGTTE 235

Query: 362 DKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRP 421
           D+  P PL +LK+     +   +  T +L  +G ++ FG    G LG    G     + P
Sbjct: 236 DRVSPTPLKNLKTKQVKYIACGQNYTAILTASGGLFLFGQGSEGQLG---HGSHSNEVNP 292

Query: 422 RILDSLRAHHVSQISTGLYHTVVVTDR-GRLFGFGDNERAQLG--HDTLRGCLEP 473
           R +       ++Q++ G  HT+V+  R GR F  G   + QLG  +D+ + C  P
Sbjct: 293 RSVQGFLGSEITQVACGRQHTLVLEGRTGRFFSLGQGSKGQLGLDNDSSKSCASP 347



 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 84/276 (30%), Positives = 129/276 (46%), Gaps = 15/276 (5%)

Query: 207 PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPK-SIAPL 265
           PR V AL G   ++++ GL  T  L   G V  CG+N  GQLG     DRP  + +  P 
Sbjct: 29  PREVPALAGKQIREISCGLRHTCVLLRDGTVMMCGANDRGQLGQ----DRPGSELAHVPA 84

Query: 266 EEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS--NFCLGHGEQHDELQPRAIQTFRRKGI 323
            E   + Q++ G  + LAVT  G V  +G        L  G+  D+ +PR +++      
Sbjct: 85  TETLVITQVSCGNDHTLAVTDRGQVLGWGRNDRGQCGLSTGDSEDKRKPRFLKSL--SSC 142

Query: 324 HVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG---HGDEIDKTLPEPLSSLKSHLAVQV 380
            V +V+ G  H +AL   G ++ WG    G LG    G  + +  P+ LSSL      ++
Sbjct: 143 QVAQVACGSMHSMALTRDGRIFAWGDNSFGQLGIGAPGRTLYRDHPQQLSSLPGVPIRRL 202

Query: 381 CARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLY 440
                 +F L  +G+V+G+G    G LG    G ++  + P  L +L+   V  I+ G  
Sbjct: 203 ACGGWHSFALSVSGAVFGWGKNNCGQLGL---GTTEDRVSPTPLKNLKTKQVKYIACGQN 259

Query: 441 HTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 476
           +T ++T  G LF FG     QLGH +    + P  +
Sbjct: 260 YTAILTASGGLFLFGQGSEGQLGHGSHSNEVNPRSV 295



 Score = 77.4 bits (189), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 69/247 (27%), Positives = 106/247 (42%), Gaps = 13/247 (5%)

Query: 237 VHTCGSNTHGQLG---HGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
           V + G    GQLG    GD +   +     P      + +I+ G  +   +  +G V   
Sbjct: 3   VFSWGCTQDGQLGISGLGDDVPSLSSPREVPALAGKQIREISCGLRHTCVLLRDGTVMMC 62

Query: 294 GSGSNFCLGHGEQHDEL-QPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK--- 349
           G+     LG      EL    A +T     + + +VS G++H +A+   G V  WG+   
Sbjct: 63  GANDRGQLGQDRPGSELAHVPATET-----LVITQVSCGNDHTLAVTDRGQVLGWGRNDR 117

Query: 350 GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGF 409
           G CG L  GD  DK  P  L SL S    QV      +  L   G ++ +G   FG LG 
Sbjct: 118 GQCG-LSTGDSEDKRKPRFLKSLSSCQVAQVACGSMHSMALTRDGRIFAWGDNSFGQLGI 176

Query: 410 PDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG 469
              G +     P+ L SL    + +++ G +H+  ++  G +FG+G N   QLG  T   
Sbjct: 177 GAPGRTLYRDHPQQLSSLPGVPIRRLACGGWHSFALSVSGAVFGWGKNNCGQLGLGTTED 236

Query: 470 CLEPTEI 476
            + PT +
Sbjct: 237 RVSPTPL 243



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 88/341 (25%), Positives = 133/341 (39%), Gaps = 54/341 (15%)

Query: 115 QITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
           ++  G +H+  +S S +VF  G + CG LG G  T   VS T +       V  ++  +N
Sbjct: 201 RLACGGWHSFALSVSGAVFGWGKNNCGQLGLG-TTEDRVSPTPLKNLKTKQVKYIACGQN 259

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
           + A +  SG +F  G  S    GH   +  +  PR V+   G    QV  G   T  L  
Sbjct: 260 YTAILTASGGLFLFGQGSEGQLGHGSHSNEV-NPRSVQGFLGSEITQVACGRQHTLVLEG 318

Query: 234 R-GHVHTCGSNTHGQLGHGDTLDRPTPKSIA-----PLEEVGSVVQIAAGPSYMLAVTGN 287
           R G   + G  + GQLG    LD  + KS A     P E   S    + G      +   
Sbjct: 319 RTGRFFSLGQGSKGQLG----LDNDSSKSCASPVPGPWEAPSSTEGCSNGEESRSII--- 371

Query: 288 GVVYSFGSGSNFCL---GHGEQH------------------DELQP-----------RAI 315
           G +++ G   +FC+   G+   H                  D LQ            +A+
Sbjct: 372 GSIFA-GGDQSFCIVSRGNDPDHPLDFREAIPSIEPVVLTKDLLQEVSESSPLLEPSKAV 430

Query: 316 QTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSH 375
           QT     + +   +  +   +    SG ++ +G+G  G LGHG   ++  P  +     +
Sbjct: 431 QTLE---MALSSPACLNASFLVGAGSGGLFLFGQGSEGQLGHGSHSNEVNPRSVKDFLGN 487

Query: 376 LAVQVCARKRKTFVLVD-TGSVYGFGWMGFGSLGFPDRGVS 415
              QV   ++ T VL   TG  Y  G    G LG  D G S
Sbjct: 488 EITQVACGRQHTLVLEGRTGGFYSLGQGSKGQLGL-DNGSS 527



 Score = 53.1 bits (126), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 78/327 (23%), Positives = 141/327 (43%), Gaps = 51/327 (15%)

Query: 115 QITTGRYHTLLISNSS--VFSCGSSLCGVLGHGPETTQ-CVSFTRINFPSAAHVVQVSAS 171
           Q+  GR HTL++   +   FS G    G LG   ++++ C S     + + +     S  
Sbjct: 305 QVACGRQHTLVLEGRTGRFFSLGQGSKGQLGLDNDSSKSCASPVPGPWEAPSSTEGCSNG 364

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHR--DTNRPI-FRPRLVEALKGVPCKQVTAGLNFT 228
           E   + +   G +F  GD S FC   R  D + P+ FR    EA+  +    +T  L   
Sbjct: 365 EESRSII---GSIFAGGDQS-FCIVSRGNDPDHPLDFR----EAIPSIEPVVLTKDL--- 413

Query: 229 GFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG 288
                             ++     L  P+ K++  LE   ++   A   +  L   G+G
Sbjct: 414 ----------------LQEVSESSPLLEPS-KAVQTLEM--ALSSPACLNASFLVGAGSG 454

Query: 289 VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS-SGYVYTW 347
            ++ FG GS   LGHG   +E+ PR+++ F   G  + +V+ G +H + L+  +G  Y+ 
Sbjct: 455 GLFLFGQGSEGQLGHGSHSNEVNPRSVKDFL--GNEITQVACGRQHTLVLEGRTGGFYSL 512

Query: 348 GKGYCGALGHGDEIDKT----LPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 403
           G+G  G LG  +   K+    +P P  +  S    + C+   ++  ++  GS++  G   
Sbjct: 513 GQGSKGQLGLDNGSSKSCASLVPGPWEAPSS---TEGCSNGEESRSII--GSIFAGGDQS 567

Query: 404 FGSLGFPDRGVSDKVLRPRILDSLRAH 430
           F  +    RG    +L   ++ +++ H
Sbjct: 568 FCIV---SRGNISGILNTHLIPTIQKH 591


>gi|348563446|ref|XP_003467518.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3-like [Cavia
           porcellus]
          Length = 1050

 Score =  131 bits (329), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 92/266 (34%), Positives = 137/266 (51%), Gaps = 20/266 (7%)

Query: 219 KQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS-----VVQ 273
           K+V  G +   FL   G V+TCG NT GQLGH    ++P        E++G+     ++ 
Sbjct: 37  KEVACGGDHCVFLLEDGEVYTCGLNTKGQLGHEREGNQP--------EQIGALADQHIIH 88

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQ-PRAIQTFRRKGIHVVRVSAGD 332
           +A G S+ LA++  G ++S+G+GS+  LG     D +  PR IQ   ++ I  ++VS G+
Sbjct: 89  VACGESHSLALSDQGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTI--LQVSCGN 146

Query: 333 EHVVALDSSGYVYTWGKGYCGALGHGDEI-DKTLPEPLSSLKSHLAVQVCARKRKTFVLV 391
            H +AL + G  +TWGK   G LG G E   +T P+ + SL+     QV A    +F L 
Sbjct: 147 WHCLALATDGQFFTWGKNSHGQLGLGKEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFALS 206

Query: 392 DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRL 451
            +G+V+G+G    G LG  D    +    P  +  LR   V  IS G  HT V+T  G +
Sbjct: 207 LSGAVFGWGMNNAGQLGLSDEKDRES---PCHVKLLRTQKVVYISCGEEHTAVLTKSGGV 263

Query: 452 FGFGDNERAQLGHDTLRGCLEPTEIF 477
           F FG     QLGHD++   + P  + 
Sbjct: 264 FTFGAGSCGQLGHDSMNDEVNPRRVL 289



 Score =  125 bits (313), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 96/320 (30%), Positives = 149/320 (46%), Gaps = 11/320 (3%)

Query: 119 GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
           G +   L+ +  V++CG +  G LGH  E  Q     +I   +  H++ V+  E+H+  +
Sbjct: 43  GDHCVFLLEDGEVYTCGLNTKGQLGHEREGNQP---EQIGALADQHIIHVACGESHSLAL 99

Query: 179 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVH 238
              GQ+F+ G  S    G   T   +  PRL++ L      QV+ G      L   G   
Sbjct: 100 SDQGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALATDGQFF 159

Query: 239 TCGSNTHGQLGHGDTLDRPT-PKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 297
           T G N+HGQLG G      T P+ +  LE +  + Q+AAG ++  A++ +G V+ +G  +
Sbjct: 160 TWGKNSHGQLGLGKEFPSQTSPQRVRSLEGI-PLAQVAAGGAHSFALSLSGAVFGWGMNN 218

Query: 298 NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 357
              LG  ++ D   P  ++  R +   VV +S G+EH   L  SG V+T+G G CG LGH
Sbjct: 219 AGQLGLSDEKDRESPCHVKLLRTQ--KVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGH 276

Query: 358 GDEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSD 416
               D+  P  +  L      Q+ C R+     +  +G +Y FG    G LG    G + 
Sbjct: 277 DSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLG---TGHTC 333

Query: 417 KVLRPRILDSLRAHHVSQIS 436
            V  P  +    A H  Q+S
Sbjct: 334 NVKCPSPVKGYWAAHSGQLS 353



 Score =  121 bits (304), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 96/309 (31%), Positives = 158/309 (51%), Gaps = 14/309 (4%)

Query: 159 FPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVP 217
           F S   V +V+   +H  F+L+ G+V+TCG N+    GH R+ N    +P  + AL    
Sbjct: 30  FVSDRSVKEVACGGDHCVFLLEDGEVYTCGLNTKGQLGHEREGN----QPEQIGALADQH 85

Query: 218 CKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDR-PTPKSIAPLEEVGSVVQIAA 276
              V  G + +  L+ +G + + G+ + GQLG   T D    P+ I  L +  +++Q++ 
Sbjct: 86  IIHVACGESHSLALSDQGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQ-QTILQVSC 144

Query: 277 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH-DELQPRAIQTFRRKGIHVVRVSAGDEHV 335
           G  + LA+  +G  +++G  S+  LG G++   +  P+ +++   +GI + +V+AG  H 
Sbjct: 145 GNWHCLALATDGQFFTWGKNSHGQLGLGKEFPSQTSPQRVRSL--EGIPLAQVAAGGAHS 202

Query: 336 VALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGS 395
            AL  SG V+ WG    G LG  DE D+  P  +  L++   V +   +  T VL  +G 
Sbjct: 203 FALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGG 262

Query: 396 VYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV-VTDRGRLFGF 454
           V+ FG    G LG     ++D+V  PR +  L    V+QI+ G  HT+  V   G ++ F
Sbjct: 263 VFTFGAGSCGQLG--HDSMNDEV-NPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAF 319

Query: 455 GDNERAQLG 463
           G   R QLG
Sbjct: 320 GCGARGQLG 328



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 91/295 (30%), Positives = 136/295 (46%), Gaps = 22/295 (7%)

Query: 114 MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSAS 171
           + +  G  H+L +S+   +FS G+   G LG    T   V+  R I   +   ++QVS  
Sbjct: 87  IHVACGESHSLALSDQGQLFSWGAGSDGQLGLM-TTEDSVAVPRLIQKLNQQTILQVSCG 145

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
             H   +   GQ FT G NS    G          P+ V +L+G+P  QV AG   +  L
Sbjct: 146 NWHCLALATDGQFFTWGKNSHGQLGLGKEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFAL 205

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
           ++ G V   G N  GQLG  D  DR +P  +  L     VV I+ G  +   +T +G V+
Sbjct: 206 SLSGAVFGWGMNNAGQLGLSDEKDRESPCHVK-LLRTQKVVYISCGEEHTAVLTKSGGVF 264

Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA-LDSSGYVYTWGKG 350
           +FG+GS   LGH   +DE+ PR +      G  V +++ G +H +A + SSG +Y +G G
Sbjct: 265 TFGAGSCGQLGHDSMNDEVNPRRV--LELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCG 322

Query: 351 YCGALGHGDEIDKTLPEPLS---------------SLKSHLAVQVCARKRKTFVL 390
             G LG G   +   P P+                  K H+  Q+ +   +TFVL
Sbjct: 323 ARGQLGTGHTCNVKCPSPVKGYWAAHSGQLSARADRFKYHIVKQIFSGGDQTFVL 377


>gi|195376505|ref|XP_002047037.1| GJ12148 [Drosophila virilis]
 gi|194154195|gb|EDW69379.1| GJ12148 [Drosophila virilis]
          Length = 1053

 Score =  131 bits (329), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 104/339 (30%), Positives = 155/339 (45%), Gaps = 13/339 (3%)

Query: 130 SVFSCGSSLCGVLGHG-PETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCG 188
            ++  G++  G LG G  E  Q ++ ++I +   + V QV+    H  F+  SG+V+ CG
Sbjct: 2   ELYCWGNASHGQLGLGGIEDEQILTPSQIPWKPDSAVNQVACGHRHTLFLTASGKVYACG 61

Query: 189 DNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQL 248
            N     GH     P  RP  +  L+     Q+  G   +  LT  G V + G N  GQL
Sbjct: 62  SNDYSQLGHE---LPTKRPLQIPELEDYVITQIACGSRHSMALTEWGQVLSWGDNECGQL 118

Query: 249 GHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHD 308
           GH    D      I       +VVQIA G ++ LA+T  G +YS+GS     LG     +
Sbjct: 119 GHASDQDVIQLPKIVRYLVSKTVVQIACGNNHSLALTCCGELYSWGSNIYGQLGVKSPSE 178

Query: 309 ELQ---PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTL 365
             Q   P  + T    GI    ++ G  H   +  S  V+ WG+  CG LG  DE ++  
Sbjct: 179 LSQCNYPMRLTTLL--GIPAAAIACGGNHTFLISKSSAVFGWGRNNCGQLGLNDETNRAY 236

Query: 366 PEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILD 425
           P  L +L++     V      +  L + G V+  G   +G LG    G S   + PR++ 
Sbjct: 237 PTQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGAYGQLG---HGFSSNEMLPRMVM 293

Query: 426 SLRAHHVSQISTGLYHTV-VVTDRGRLFGFGDNERAQLG 463
            L    +SQ++ G  HT+ +V  RGR++GFG     QLG
Sbjct: 294 ELMGSTISQVACGNRHTLALVPSRGRIYGFGLGSSGQLG 332



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 92/305 (30%), Positives = 140/305 (45%), Gaps = 23/305 (7%)

Query: 115 QITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
           Q+  G  HTL ++ S  V++CGS+    LGH   T + +    +       + Q++    
Sbjct: 40  QVACGHRHTLFLTASGKVYACGSNDYSQLGHELPTKRPLQIPEL---EDYVITQIACGSR 96

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
           H+  + + GQV + GDN     GH      I  P++V  L      Q+  G N +  LT 
Sbjct: 97  HSMALTEWGQVLSWGDNECGQLGHASDQDVIQLPKIVRYLVSKTVVQIACGNNHSLALTC 156

Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPT-------PKSIAPLEEVGSVVQIAAGPSYMLAVTG 286
            G +++ GSN +GQLG    +  P+       P  +  L  + +   IA G ++   ++ 
Sbjct: 157 CGELYSWGSNIYGQLG----VKSPSELSQCNYPMRLTTLLGIPAAA-IACGGNHTFLISK 211

Query: 287 NGVVYSFGSGSNFC--LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           +  V  FG G N C  LG  ++ +   P  ++T R  G+    V+ GDE  V L + G V
Sbjct: 212 SSAV--FGWGRNNCGQLGLNDETNRAYPTQLKTLRTLGVRF--VACGDEFSVFLTNEGGV 267

Query: 345 YTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDT-GSVYGFGWMG 403
           +T G G  G LGHG   ++ LP  +  L      QV    R T  LV + G +YGFG   
Sbjct: 268 FTCGAGAYGQLGHGFSSNEMLPRMVMELMGSTISQVACGNRHTLALVPSRGRIYGFGLGS 327

Query: 404 FGSLG 408
            G LG
Sbjct: 328 SGQLG 332



 Score = 94.7 bits (234), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 73/245 (29%), Positives = 112/245 (45%), Gaps = 10/245 (4%)

Query: 236 HVHTCGSNTHGQLGHGDTLDRP--TPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
            ++  G+ +HGQLG G   D    TP  I P +   +V Q+A G  + L +T +G VY+ 
Sbjct: 2   ELYCWGNASHGQLGLGGIEDEQILTPSQI-PWKPDSAVNQVACGHRHTLFLTASGKVYAC 60

Query: 294 GSGSNFCLGHGEQHDEL-QPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 352
           GS     LGH     EL   R +Q    +   + +++ G  H +AL   G V +WG   C
Sbjct: 61  GSNDYSQLGH-----ELPTKRPLQIPELEDYVITQIACGSRHSMALTEWGQVLSWGDNEC 115

Query: 353 GALGHGDEIDKT-LPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 411
           G LGH  + D   LP+ +  L S   VQ+      +  L   G +Y +G   +G LG   
Sbjct: 116 GQLGHASDQDVIQLPKIVRYLVSKTVVQIACGNNHSLALTCCGELYSWGSNIYGQLGVKS 175

Query: 412 RGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCL 471
                +   P  L +L     + I+ G  HT +++    +FG+G N   QLG +      
Sbjct: 176 PSELSQCNYPMRLTTLLGIPAAAIACGGNHTFLISKSSAVFGWGRNNCGQLGLNDETNRA 235

Query: 472 EPTEI 476
            PT++
Sbjct: 236 YPTQL 240



 Score = 55.8 bits (133), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 48/149 (32%), Positives = 68/149 (45%), Gaps = 4/149 (2%)

Query: 116 ITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           I  G  HT LIS SS VF  G + CG LG   ET +    T++       V  V+  +  
Sbjct: 199 IACGGNHTFLISKSSAVFGWGRNNCGQLGLNDETNRAYP-TQLKTLRTLGVRFVACGDEF 257

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFT-GFLTI 233
           + F+   G VFTCG  +    GH  ++  +  PR+V  L G    QV  G   T   +  
Sbjct: 258 SVFLTNEGGVFTCGAGAYGQLGHGFSSNEML-PRMVMELMGSTISQVACGNRHTLALVPS 316

Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPTPKSI 262
           RG ++  G  + GQLG  +T     P+ +
Sbjct: 317 RGRIYGFGLGSSGQLGTRNTKSLNLPQVV 345


>gi|224099911|ref|XP_002311672.1| predicted protein [Populus trichocarpa]
 gi|222851492|gb|EEE89039.1| predicted protein [Populus trichocarpa]
          Length = 1109

 Score =  131 bits (329), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 102/313 (32%), Positives = 149/313 (47%), Gaps = 20/313 (6%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V Q+S    H A V + G+VFT G+ S    GH   +     P+LVE+L       V  G
Sbjct: 267 VHQISCGVRHVALVTRQGEVFTWGEESGGRLGHGIEDH-FTHPKLVESLAVTNIDYVACG 325

Query: 225 LNFTGFLTIRGHVHTCG--SNTHGQLGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSYM 281
              T  ++  G + T G  SN  G LGHG  +    PK ++ PLE +  V+ IA G  + 
Sbjct: 326 EYHTCAISTSGDLFTWGDGSNNSGLLGHGTDVSHWIPKRVSGPLEGL-QVLSIACGTWHS 384

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL--- 338
              T NG +++FG G+   LGHG++     P+ +Q+    G+  ++V+ G  H  A+   
Sbjct: 385 ALATSNGKLFTFGDGTFGALGHGDRKSVSSPKELQSL--NGLKTIKVACGVWHTAAIVEV 442

Query: 339 -------DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 391
                   SS  ++TWG G    LGHG++    LP  +SSL  +   Q+      T  L 
Sbjct: 443 MSQSGSNISSRKLFTWGDGDKHRLGHGNKDAYLLPTCVSSLIDYNFQQLACGHTMTVALT 502

Query: 392 DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRL 451
            +G V+  G   +G LG P    S+  +   + D L    V +IS G YHT V+T R  +
Sbjct: 503 TSGHVFTMGGSAYGQLGNPS---SNGKIPCLVQDRLVGEFVEEISCGAYHTAVLTSRSEV 559

Query: 452 FGFGDNERAQLGH 464
           F +G     QLGH
Sbjct: 560 FTWGRGANGQLGH 572



 Score = 95.5 bits (236), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 83/297 (27%), Positives = 138/297 (46%), Gaps = 16/297 (5%)

Query: 200 TNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTP 259
           T   +  P+ +E+   +   Q++ G+     +T +G V T G  + G+LGHG       P
Sbjct: 249 TKNDVLTPKPLESNVVLDVHQISCGVRHVALVTRQGEVFTWGEESGGRLGHGIEDHFTHP 308

Query: 260 KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC--LGHGEQHDELQPRAIQT 317
           K +  L  V ++  +A G  +  A++ +G ++++G GSN    LGHG       P+ + +
Sbjct: 309 KLVESL-AVTNIDYVACGEYHTCAISTSGDLFTWGDGSNNSGLLGHGTDVSHWIPKRV-S 366

Query: 318 FRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLA 377
              +G+ V+ ++ G  H     S+G ++T+G G  GALGHGD    + P+ L SL     
Sbjct: 367 GPLEGLQVLSIACGTWHSALATSNGKLFTFGDGTFGALGHGDRKSVSSPKELQSLNGLKT 426

Query: 378 VQVCARKRKTFVLVDTGSVYG--------FGWMGFGSLGFPDRGVSDKVLRPRILDSLRA 429
           ++V      T  +V+  S  G        F W G G       G  D  L P  + SL  
Sbjct: 427 IKVACGVWHTAAIVEVMSQSGSNISSRKLFTW-GDGDKHRLGHGNKDAYLLPTCVSSLID 485

Query: 430 HHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG---CLEPTEIFIQEMEE 483
           ++  Q++ G   TV +T  G +F  G +   QLG+ +  G   CL    +  + +EE
Sbjct: 486 YNFQQLACGHTMTVALTTSGHVFTMGGSAYGQLGNPSSNGKIPCLVQDRLVGEFVEE 542



 Score = 92.0 bits (227), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 77/272 (28%), Positives = 130/272 (47%), Gaps = 19/272 (6%)

Query: 116 ITTGRYHTLLISNSS---VFSCGSSLCGVLGHGPETTQCVSFTRINFP-SAAHVVQVSAS 171
           +  G YHT  IS S     +  GS+  G+LGHG + +  +   R++ P     V+ ++  
Sbjct: 322 VACGEYHTCAISTSGDLFTWGDGSNNSGLLGHGTDVSHWIP-KRVSGPLEGLQVLSIACG 380

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
             H+A    +G++FT GD +    GH D  + +  P+ +++L G+   +V  G+  T  +
Sbjct: 381 TWHSALATSNGKLFTFGDGTFGALGHGD-RKSVSSPKELQSLNGLKTIKVACGVWHTAAI 439

Query: 232 T----------IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 281
                          + T G     +LGHG+      P  ++ L +  +  Q+A G +  
Sbjct: 440 VEVMSQSGSNISSRKLFTWGDGDKHRLGHGNKDAYLLPTCVSSLIDY-NFQQLACGHTMT 498

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 341
           +A+T +G V++ G  +   LG+   + ++ P  +Q  R  G  V  +S G  H   L S 
Sbjct: 499 VALTTSGHVFTMGGSAYGQLGNPSSNGKI-PCLVQD-RLVGEFVEEISCGAYHTAVLTSR 556

Query: 342 GYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
             V+TWG+G  G LGHGD  D+ LP  + +LK
Sbjct: 557 SEVFTWGRGANGQLGHGDTEDRKLPTLVEALK 588



 Score = 68.9 bits (167), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 69/253 (27%), Positives = 110/253 (43%), Gaps = 30/253 (11%)

Query: 114 MQITTGRYHTLL-ISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           + I  G +H+ L  SN  +F+ G    G LGHG +     S   +   +    ++V+   
Sbjct: 375 LSIACGTWHSALATSNGKLFTFGDGTFGALGHG-DRKSVSSPKELQSLNGLKTIKVACGV 433

Query: 173 NHAAFVL----QSG------QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 222
            H A ++    QSG      ++FT GD      GH + +  +  P  V +L     +Q+ 
Sbjct: 434 WHTAAIVEVMSQSGSNISSRKLFTWGDGDKHRLGHGNKDAYLL-PTCVSSLIDYNFQQLA 492

Query: 223 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL----EEVGSVVQ-IAAG 277
            G   T  LT  GHV T G + +GQLG+      P+     P       VG  V+ I+ G
Sbjct: 493 CGHTMTVALTTSGHVFTMGGSAYGQLGN------PSSNGKIPCLVQDRLVGEFVEEISCG 546

Query: 278 PSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
             +   +T    V+++G G+N  LGHG+  D   P  ++  + +  HV  +S G      
Sbjct: 547 AYHTAVLTSRSEVFTWGRGANGQLGHGDTEDRKLPTLVEALKER--HVKNLSCG----AN 600

Query: 338 LDSSGYVYTWGKG 350
             SS  ++ W  G
Sbjct: 601 FTSSICIHKWVSG 613


>gi|149043903|gb|EDL97354.1| rCG61079, isoform CRA_c [Rattus norvegicus]
          Length = 928

 Score =  131 bits (329), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 91/276 (32%), Positives = 142/276 (51%), Gaps = 10/276 (3%)

Query: 204 IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 263
           +  PR  +       + V  GL  T F+   G V+TCG N  GQLGH  +  R  P+ + 
Sbjct: 22  VLEPRKSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKS--RKKPEQVV 79

Query: 264 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLG-HGEQHDELQPRAIQTFRRKG 322
            L+   ++V ++ G ++ LA+   G VY++G  S+  LG  G +     PR I++     
Sbjct: 80  ALD-AQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSL--SD 136

Query: 323 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK-TLPEPLSSLKSHLAVQVC 381
           I +V+V+ G  H +AL  +  V+ WG+   G LG G E  K T P+ + SL     +QV 
Sbjct: 137 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIECQKQTSPQLIKSLLGIPFMQVA 196

Query: 382 ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYH 441
           A    +FVL  +G+++G+G   FG LG  D   +D+ + P +L SLR+  +  I  G  H
Sbjct: 197 AGGAHSFVLTLSGAIFGWGRNKFGQLGLNDE--NDRYV-PNLLKSLRSQKIVYICCGEDH 253

Query: 442 TVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF 477
           T  +T  G +F FG     QLGH++    + P ++F
Sbjct: 254 TAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVF 289



 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 106/333 (31%), Positives = 154/333 (46%), Gaps = 13/333 (3%)

Query: 135 GSSLCGVLGHGPETTQCVSFTRI-NFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSF 193
           G++  G LG G    + V   R  +F     V  V     H  FVL  G V+TCG N   
Sbjct: 5   GNASYGQLGLGGIDEEIVLEPRKSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLG 64

Query: 194 CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLG-HGD 252
             GH  + +   +P  V AL       V+ G   T  L  +G V+  G ++ GQLG  G 
Sbjct: 65  QLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLQGS 121

Query: 253 TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHG-EQHDELQ 311
                 P++I  L ++  +VQ+A G  + LA++    V+ +G      LG G E   +  
Sbjct: 122 EECIRVPRNIKSLSDI-QIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIECQKQTS 180

Query: 312 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSS 371
           P+ I++    GI  ++V+AG  H   L  SG ++ WG+   G LG  DE D+ +P  L S
Sbjct: 181 PQLIKSLL--GIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKS 238

Query: 372 LKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHH 431
           L+S   V +C  +  T  L   G V+ FG  G+G LG      +   + PR +  L    
Sbjct: 239 LRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG---HNSTSHEINPRKVFELMGSI 295

Query: 432 VSQISTGLYHT-VVVTDRGRLFGFGDNERAQLG 463
           V+QI+ G  HT   V   GR++ FG     QLG
Sbjct: 296 VTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 80/291 (27%), Positives = 138/291 (47%), Gaps = 8/291 (2%)

Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 179
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V VS  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVSCGEAHTLALN 100

Query: 180 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 239
             GQV+  G +S    G + +   I  PR +++L  +   QV  G   +  L+    V  
Sbjct: 101 DKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFC 160

Query: 240 CGSNTHGQLGHGDTLDRPT-PKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
            G N +GQLG G    + T P+ I  L  +   +Q+AAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKYGQLGLGIECQKQTSPQLIKSLLGI-PFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 299 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 358
             LG  +++D   P  +++ R + I  V +  G++H  AL   G V+T+G G  G LGH 
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRSQKI--VYICCGEDHTAALTKEGGVFTFGAGGYGQLGHN 277

Query: 359 DEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLG 408
               +  P  +  L   +  Q+ C R+  +  +  +G +Y FG  G G LG
Sbjct: 278 STSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  102 bits (254), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 84/274 (30%), Positives = 132/274 (48%), Gaps = 10/274 (3%)

Query: 98  QSVEHSSDIVETSAGNM-QITTGRYHTLLISNS-SVFSCGSSLCGVLG-HGPETTQCVSF 154
           +S +    +V   A N+  ++ G  HTL +++   V++ G    G LG  G E  +C+  
Sbjct: 70  KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLQGSE--ECIRV 127

Query: 155 TR-INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEAL 213
            R I   S   +VQV+    H+  + ++ +VF  G N     G     +    P+L+++L
Sbjct: 128 PRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIECQKQTSPQLIKSL 187

Query: 214 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
            G+P  QV AG   +  LT+ G +   G N  GQLG  D  DR  P  +  L     +V 
Sbjct: 188 LGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRS-QKIVY 246

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           I  G  +  A+T  G V++FG+G    LGH     E+ PR +  F   G  V +++ G +
Sbjct: 247 ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQ 304

Query: 334 HVVA-LDSSGYVYTWGKGYCGALGHGDEIDKTLP 366
           H  A + SSG +Y++G G  G LG G   ++  P
Sbjct: 305 HTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338



 Score = 82.0 bits (201), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 68/206 (33%), Positives = 99/206 (48%), Gaps = 6/206 (2%)

Query: 114 MQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +Q+  G YH+L +S +S VF  G +  G LG G E  +  S   I        +QV+A  
Sbjct: 140 VQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIECQKQTSPQLIKSLLGIPFMQVAAGG 199

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            H+  +  SG +F  G N     G  D N   + P L+++L+      +  G + T  LT
Sbjct: 200 AHSFVLTLSGAIFGWGRNKFGQLGLNDENDR-YVPNLLKSLRSQKIVYICCGEDHTAALT 258

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVV 290
             G V T G+  +GQLGH  T     P+ +   E +GS+V QIA G  +  A V  +G +
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRI 316

Query: 291 YSFGSGSNFCLGHGEQHDELQPRAIQ 316
           YSFG G N  LG G   +   P  ++
Sbjct: 317 YSFGLGGNGQLGTGSTSNRKSPFTVK 342


>gi|148700104|gb|EDL32051.1| hect domain and RLD 4, isoform CRA_a [Mus musculus]
          Length = 546

 Score =  131 bits (329), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 91/276 (32%), Positives = 142/276 (51%), Gaps = 10/276 (3%)

Query: 204 IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 263
           +  PR  +       + V  GL  T F+   G V+TCG N  GQLGH  +  R  P+ + 
Sbjct: 22  VLEPRRSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKS--RKKPEQVV 79

Query: 264 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLG-HGEQHDELQPRAIQTFRRKG 322
            L+   ++V +A G ++ LA+   G VY++G  S+  LG  G +     PR I++     
Sbjct: 80  ALD-AQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSLSD-- 136

Query: 323 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK-TLPEPLSSLKSHLAVQVC 381
           I +V+V+ G  H +AL  +  V+ WG+   G LG G +  K T P+ + SL     +QV 
Sbjct: 137 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCQKQTSPQLIKSLLGIPFMQVA 196

Query: 382 ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYH 441
           A    +FVL  +G+++G+G   FG LG  D   +D+ + P +L SLR+  +  I  G  H
Sbjct: 197 AGGAHSFVLTLSGAIFGWGRNKFGQLGLNDE--NDRYV-PNLLKSLRSQKIVYICCGEDH 253

Query: 442 TVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF 477
           T  +T  G +F FG     QLGH++    + P ++F
Sbjct: 254 TAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVF 289



 Score =  126 bits (316), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 144/311 (46%), Gaps = 12/311 (3%)

Query: 156 RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 215
           R +F     V  V     H  FVL  G V+TCG N     GH  + +   +P  V AL  
Sbjct: 27  RSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRK---KPEQVVALDA 83

Query: 216 VPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLG-HGDTLDRPTPKSIAPLEEVGSVVQI 274
                V  G   T  L  +G V+  G ++ GQLG  G       P++I  L ++  +VQ+
Sbjct: 84  QNIVAVACGEAHTLALNDKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSLSDI-QIVQV 142

Query: 275 AAGPSYMLAVTGNGVVYSFGSGSNFCLGHG-EQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           A G  + LA++    V+ +G      LG G +   +  P+ I++    GI  ++V+AG  
Sbjct: 143 ACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCQKQTSPQLIKSLL--GIPFMQVAAGGA 200

Query: 334 HVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDT 393
           H   L  SG ++ WG+   G LG  DE D+ +P  L SL+S   V +C  +  T  L   
Sbjct: 201 HSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKE 260

Query: 394 GSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHT-VVVTDRGRLF 452
           G V+ FG  G+G LG      +   + PR +  L    V+Q++ G  HT   V   GR++
Sbjct: 261 GGVFTFGAGGYGQLG---HNSTSHEINPRKVFELMGSIVTQVACGRQHTSAFVPSSGRIY 317

Query: 453 GFGDNERAQLG 463
            FG     QLG
Sbjct: 318 SFGLGGNGQLG 328



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 79/291 (27%), Positives = 139/291 (47%), Gaps = 8/291 (2%)

Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 179
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V V+  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVACGEAHTLALN 100

Query: 180 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 239
             GQV+  G +S    G + +   I  PR +++L  +   QV  G   +  L+    V  
Sbjct: 101 DKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFC 160

Query: 240 CGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
            G N +GQLG G D   + +P+ I  L  +   +Q+AAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKYGQLGLGIDCQKQTSPQLIKSLLGI-PFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 299 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 358
             LG  +++D   P  +++ R +   +V +  G++H  AL   G V+T+G G  G LGH 
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRSQ--KIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHN 277

Query: 359 DEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLG 408
               +  P  +  L   +  QV C R+  +  +  +G +Y FG  G G LG
Sbjct: 278 STSHEINPRKVFELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 85/274 (31%), Positives = 131/274 (47%), Gaps = 10/274 (3%)

Query: 98  QSVEHSSDIVETSAGNM-QITTGRYHTLLISNS-SVFSCGSSLCGVLG-HGPETTQCVSF 154
           +S +    +V   A N+  +  G  HTL +++   V++ G    G LG  G E  +C+  
Sbjct: 70  KSRKKPEQVVALDAQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQLGLQGSE--ECIRV 127

Query: 155 TR-INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEAL 213
            R I   S   +VQV+    H+  + ++ +VF  G N     G     +    P+L+++L
Sbjct: 128 PRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCQKQTSPQLIKSL 187

Query: 214 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
            G+P  QV AG   +  LT+ G +   G N  GQLG  D  DR  P  +  L     +V 
Sbjct: 188 LGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQ-KIVY 246

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           I  G  +  A+T  G V++FG+G    LGH     E+ PR +  F   G  V +V+ G +
Sbjct: 247 ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQVACGRQ 304

Query: 334 HVVA-LDSSGYVYTWGKGYCGALGHGDEIDKTLP 366
           H  A + SSG +Y++G G  G LG G   ++  P
Sbjct: 305 HTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338



 Score = 79.3 bits (194), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 70/229 (30%), Positives = 109/229 (47%), Gaps = 11/229 (4%)

Query: 91  KRVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETT 149
           +  +R  ++++  SDI       +Q+  G YH+L +S +S VF  G +  G LG G +  
Sbjct: 122 EECIRVPRNIKSLSDIQI-----VQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCQ 176

Query: 150 QCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRL 209
           +  S   I        +QV+A   H+  +  SG +F  G N     G  D N   + P L
Sbjct: 177 KQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDR-YVPNL 235

Query: 210 VEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG 269
           +++L+      +  G + T  LT  G V T G+  +GQLGH  T     P+ +   E +G
Sbjct: 236 LKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMG 293

Query: 270 SVV-QIAAGPSYMLA-VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQ 316
           S+V Q+A G  +  A V  +G +YSFG G N  LG G   +   P  ++
Sbjct: 294 SIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342


>gi|449275747|gb|EMC84515.1| putative E3 ubiquitin-protein ligase HERC2 [Columba livia]
          Length = 4840

 Score =  131 bits (329), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 96/328 (29%), Positives = 158/328 (48%), Gaps = 16/328 (4%)

Query: 161  SAAHVVQVSASENHAAFVLQSGQVFTCGD--NSSFCCGHRDTNRPIFRPRLVEALKGVPC 218
            SA +VVQV+        V   G+V+ CG+  N     G      PI  PR + AL     
Sbjct: 2994 SALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPI--PRQITALSNYVV 3051

Query: 219  KQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA 276
            K+V   +G      LT+ G V + G    G+LGH   ++   P+ I  L+    +  IA 
Sbjct: 3052 KKVAVHSGGRHAMALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALK-TKRIRDIAC 3110

Query: 277  GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEH 334
            G S+  A+T +G +Y++G G    LGHG+   +L+P+ ++     G  V++V+ G  D  
Sbjct: 3111 GSSHSAAITSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLL--GHRVIQVACGSRDAQ 3168

Query: 335  VVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 394
             +AL   G V++WG G  G LG G      +P+ +  L      Q+    + +  L  +G
Sbjct: 3169 TLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSG 3228

Query: 395  SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 454
             V+ +G   +  LG    G    V +P++++ LR   +  ++ G  H + VTD G+++ +
Sbjct: 3229 VVWTWGKGDYFRLG---HGTDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDTGQVYAW 3285

Query: 455  GDNERAQLGHDTLRGCLEPTEIFIQEME 482
            GDN+  Q G+ T     +PT   +Q +E
Sbjct: 3286 GDNDHGQQGNGTTTVNRKPT--LVQGLE 3311



 Score =  127 bits (319), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 93/288 (32%), Positives = 142/288 (49%), Gaps = 10/288 (3%)

Query: 183  QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 242
            +VF  G N     G    ++ I  P   E L  +   QV  G      +T+ G V+ CG 
Sbjct: 2964 KVFVWGLNDKDQLGGLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGE 3022

Query: 243  NTHGQLGHG-DTLDRPTPKSIAPLEE-VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 300
             T+G+LG G  +   P P+ I  L   V   V + +G  + +A+T +G V+S+G G +  
Sbjct: 3023 ATNGRLGLGISSGTVPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKVFSWGEGDDGK 3082

Query: 301  LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 360
            LGH  + +  +PR I+  + K I    ++ G  H  A+ SSG +YTWG G  G LGHGD 
Sbjct: 3083 LGHFSRMNCDKPRLIEALKTKRIR--DIACGSSHSAAITSSGELYTWGLGEYGRLGHGDN 3140

Query: 361  IDKTLPEPLSSLKSHLAVQVC--ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKV 418
              +  P+ +  L  H  +QV   +R  +T  L D G V+ +G   FG LG   RG S+  
Sbjct: 3141 TTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLG---RGGSEGC 3197

Query: 419  LRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDT 466
              P+ ++ L    V QI  G   ++ +T  G ++ +G  +  +LGH T
Sbjct: 3198 NIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGT 3245



 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 95/311 (30%), Positives = 153/311 (49%), Gaps = 24/311 (7%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           VVQV+ +E     + ++G+V+T   NS       DT      P+LV++L      ++ A 
Sbjct: 454 VVQVACAEKRFLILSRNGRVYTQAYNS-------DT----LGPQLVQSLASRNIVKIAAH 502

Query: 225 LNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGS-VVQIAAGPS 279
            +   +L +   G V + G    G+LGHGDT+    PK I+ L  ++ G  VV IA G +
Sbjct: 503 SDGHHYLALSANGEVFSWGCGDGGRLGHGDTVPLEEPKMISALSGKQAGKHVVHIACGST 562

Query: 280 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS--AGDEHVVA 337
           Y  A+T  G +Y++G G+   LGHG   D+  P  +     KG+ V+ VS  +GD   +A
Sbjct: 563 YSAAITAEGELYTWGRGNYGRLGHGSSEDQTIPMLVTGL--KGLKVIDVSCGSGDAQTLA 620

Query: 338 LDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVY 397
           +  +G V++WG G  G LG G       P+ +  L+    V+V    + +  L   G VY
Sbjct: 621 VTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDIVKVRCGSQFSIALTKDGQVY 680

Query: 398 GFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDN 457
            +G      LG    G  + V  P++L+ L+   V  ++ G  H + +T+   +  +G N
Sbjct: 681 TWGKGDNQRLG---HGTEEHVRYPKLLEGLKGKKVIDVAAGSTHCLALTEDSEVHSWGSN 737

Query: 458 ERAQLGHDTLR 468
           ++ Q   DTLR
Sbjct: 738 DQCQ-HFDTLR 747



 Score =  119 bits (299), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 106/404 (26%), Positives = 178/404 (44%), Gaps = 23/404 (5%)

Query: 74   MSRNVQIELLNRCNGNWKRVL--RFLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSV 131
            M+ N  +++L+ C+  +KR    + +Q +    D    SAG               + ++
Sbjct: 3914 MADNENMDVLHECHDVFKREQDEQLVQWMNRRPDDWTLSAGG--------------SGTI 3959

Query: 132  FSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNS 191
            +  G +  G LG G E  +    T     +    VQ+   E     V   G+++  G  +
Sbjct: 3960 YGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGYGA 4018

Query: 192  SFCCGHRDTNRPIFRPRLVEALKGVPCKQV--TAGLNFTGFLTIRGHVHTCGSNTHGQLG 249
                G   T   +  P L+E+++ V  K+V   +G      L+  G V++ G    G+LG
Sbjct: 4019 GGRLGIGGTES-VSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLG 4077

Query: 250  HGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDE 309
            HG+      P+ I  L  +  VV +AAG ++   +T  G ++++G G    LGHG+  D+
Sbjct: 4078 HGNRSPCDRPRVIESLRGI-EVVDVAAGGAHSACITAAGDLFTWGKGRYGRLGHGDSEDQ 4136

Query: 310  LQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPL 369
            L+P+ ++  +   +  +   +GD   + L     V++WG G  G LG G      +P  +
Sbjct: 4137 LKPKLVEALQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKI 4196

Query: 370  SSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRA 429
             SL     V+V    + +  L  +G+VY   W  F        G  D V RPR +  L+ 
Sbjct: 4197 DSLTGLGVVKVECGSQFSVALTKSGAVY--TWQVFRDYHRLGHGSDDHVRRPRQVQGLQG 4254

Query: 430  HHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEP 473
              V  I+TG  H V  T+ G ++ +GDN+  QLG  T      P
Sbjct: 4255 KKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRP 4298



 Score =  112 bits (279), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 83/282 (29%), Positives = 138/282 (48%), Gaps = 12/282 (4%)

Query: 166  VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 225
            V V++   H   +   G+V++ G+      GH + + P  RPR++E+L+G+    V AG 
Sbjct: 4047 VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRS-PCDRPRVIESLRGIEVVDVAAGG 4105

Query: 226  NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA--AGPSYMLA 283
              +  +T  G + T G   +G+LGHGD+ D+  PK +  L+    V+ IA  +G +  L 
Sbjct: 4106 AHSACITAAGDLFTWGKGRYGRLGHGDSEDQLKPKLVEALQGY-RVIDIACGSGDAQTLC 4164

Query: 284  VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 343
            +T +  V+S+G G    LG G       P  I +    G+ VV+V  G +  VAL  SG 
Sbjct: 4165 LTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL--TGLGVVKVECGSQFSVALTKSGA 4222

Query: 344  VYTWG--KGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGW 401
            VYTW   + Y   LGHG +     P  +  L+    + +           + G VY +G 
Sbjct: 4223 VYTWQVFRDY-HRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGD 4281

Query: 402  MGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV 443
               G LG    G ++ + RPR++ +L+   +++++ G  HT+
Sbjct: 4282 NDEGQLG---DGTTNAIQRPRLVAALQGKKINRVACGSAHTL 4320



 Score =  101 bits (252), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 83/283 (29%), Positives = 136/283 (48%), Gaps = 24/283 (8%)

Query: 95  RFLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHG-------PE 147
           + +QS+  S +IV+ +A     + G ++  L +N  VFS G    G LGHG       P+
Sbjct: 486 QLVQSLA-SRNIVKIAAH----SDGHHYLALSANGEVFSWGCGDGGRLGHGDTVPLEEPK 540

Query: 148 TTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRP 207
               +S  +    +  HVV ++    ++A +   G+++T G  +    GH  +      P
Sbjct: 541 MISALSGKQ----AGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDQTI-P 595

Query: 208 RLVEALKGVPCKQVTAGLNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL 265
            LV  LKG+    V+ G      L +   G V + G   +G+LG G +    TPK I  L
Sbjct: 596 MLVTGLKGLKVIDVSCGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKL 655

Query: 266 EEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHV 325
           +++  +V++  G  + +A+T +G VY++G G N  LGHG +     P+ ++    KG  V
Sbjct: 656 QDL-DIVKVRCGSQFSIALTKDGQVYTWGKGDNQRLGHGTEEHVRYPKLLEGL--KGKKV 712

Query: 326 VRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEP 368
           + V+AG  H +AL     V++WG        H D +  T PEP
Sbjct: 713 IDVAAGSTHCLALTEDSEVHSWGSN--DQCQHFDTLRVTKPEP 753



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 77/242 (31%), Positives = 113/242 (46%), Gaps = 7/242 (2%)

Query: 119  GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
            GR+   L  +  VFS G    G LGH      C     I       +  ++   +H+A +
Sbjct: 3060 GRHAMALTVDGKVFSWGEGDDGKLGHF-SRMNCDKPRLIEALKTKRIRDIACGSSHSAAI 3118

Query: 179  LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN--FTGFLTIRGH 236
              SG+++T G       GH D N    +P++V+ L G    QV  G     T  LT  G 
Sbjct: 3119 TSSGELYTWGLGEYGRLGHGD-NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 3177

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 296
            V + G    G+LG G +     P++I  L   G V QI  G  + LA+T +GVV+++G G
Sbjct: 3178 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTWGKG 3236

Query: 297  SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 356
              F LGHG      +P+ ++  R  G  +V V+ G  H +A+  +G VY WG    G  G
Sbjct: 3237 DYFRLGHGTDVHVRKPQVVEGLR--GKKIVHVAVGALHCLAVTDTGQVYAWGDNDHGQQG 3294

Query: 357  HG 358
            +G
Sbjct: 3295 NG 3296



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 75/247 (30%), Positives = 125/247 (50%), Gaps = 12/247 (4%)

Query: 235  GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
            G ++  G N  GQLG   G  +  PTP +++A L  V    Q+  G   + AVT +G +Y
Sbjct: 3957 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPV----QLIGGEQTLFAVTADGKLY 4012

Query: 292  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 351
            + G G+   LG G       P  +++ +   I  V V++G +H +AL S G VY+WG+  
Sbjct: 4013 ATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAE 4072

Query: 352  CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 411
             G LGHG+      P  + SL+    V V A    +  +   G ++ +G   +G LG   
Sbjct: 4073 DGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACITAAGDLFTWGKGRYGRLG--- 4129

Query: 412  RGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG 469
             G S+  L+P+++++L+ + V  I+  +G   T+ +TD   ++ +GD +  +LG     G
Sbjct: 4130 HGDSEDQLKPKLVEALQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDG 4189

Query: 470  CLEPTEI 476
            C  P +I
Sbjct: 4190 CKVPMKI 4196



 Score = 79.7 bits (195), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 59/219 (26%), Positives = 103/219 (47%), Gaps = 21/219 (9%)

Query: 271 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 330
           VVQ+A      L ++ NG VY+    S          D L P+ +Q+   + I  +   +
Sbjct: 454 VVQVACAEKRFLILSRNGRVYTQAYNS----------DTLGPQLVQSLASRNIVKIAAHS 503

Query: 331 GDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLA----VQVCARKRK 386
              H +AL ++G V++WG G  G LGHGD +    P+ +S+L    A    V +      
Sbjct: 504 DGHHYLALSANGEVFSWGCGDGGRLGHGDTVPLEEPKMISALSGKQAGKHVVHIACGSTY 563

Query: 387 TFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVV 444
           +  +   G +Y +G   +G LG    G S+    P ++  L+   V  +S  +G   T+ 
Sbjct: 564 SAAITAEGELYTWGRGNYGRLG---HGSSEDQTIPMLVTGLKGLKVIDVSCGSGDAQTLA 620

Query: 445 VTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQEMEE 483
           VT+ G+++ +GD +  +LG     GC  P    I+++++
Sbjct: 621 VTENGQVWSWGDGDYGKLGRGGSDGCKTPK--LIEKLQD 657



 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 66/225 (29%), Positives = 100/225 (44%), Gaps = 8/225 (3%)

Query: 116  ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
            I  G  H+  I++S  +++ G    G LGHG  TTQ +    +       V+QV+     
Sbjct: 3108 IACGSSHSAAITSSGELYTWGLGEYGRLGHGDNTTQ-LKPKMVKVLLGHRVIQVACGSRD 3166

Query: 175  AA--FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            A    +   G VF+ GD      G R  +     P+ +E L G    Q+  G  F+  LT
Sbjct: 3167 AQTLALTDEGLVFSWGDGDFGKLG-RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALT 3225

Query: 233  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
              G V T G   + +LGHG  +    P+ +  L     +V +A G  + LAVT  G VY+
Sbjct: 3226 KSGVVWTWGKGDYFRLGHGTDVHVRKPQVVEGLRG-KKIVHVAVGALHCLAVTDTGQVYA 3284

Query: 293  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
            +G   +   G+G      +P  +Q    +G  + RV+ G  H VA
Sbjct: 3285 WGDNDHGQQGNGTTTVNRKPTLVQGL--EGQKITRVACGSSHSVA 3327



 Score = 62.4 bits (150), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 77/301 (25%), Positives = 120/301 (39%), Gaps = 65/301 (21%)

Query: 96   FLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFT 155
             L+S++H    ++  A N   + G++   L S   V+S G +  G LGHG   + C    
Sbjct: 4035 LLESIQHV--FIKKVAVN---SGGKHCLALSSEGEVYSWGEAEDGKLGHG-NRSPCDRPR 4088

Query: 156  RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 215
             I       VV V+A   H+A +  +G +FT G       GH D+   + +P+LVEAL+G
Sbjct: 4089 VIESLRGIEVVDVAAGGAHSACITAAGDLFTWGKGRYGRLGHGDSEDQL-KPKLVEALQG 4147

Query: 216  --------------------------------------------VPCK----------QV 221
                                                        VP K          +V
Sbjct: 4148 YRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKV 4207

Query: 222  TAGLNFTGFLTIRGHVHTCGS-NTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 280
              G  F+  LT  G V+T      + +LGHG       P+ +  L+    V+ IA G  +
Sbjct: 4208 ECGSQFSVALTKSGAVYTWQVFRDYHRLGHGSDDHVRRPRQVQGLQG-KKVIAIATGSLH 4266

Query: 281  MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 340
             +  T +G VY++G      LG G  +   +PR +   + K I+  RV+ G  H +A  +
Sbjct: 4267 CVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKIN--RVACGSAHTLAWST 4324

Query: 341  S 341
            S
Sbjct: 4325 S 4325



 Score = 55.8 bits (133), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 53/169 (31%), Positives = 76/169 (44%), Gaps = 8/169 (4%)

Query: 118 TGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
           +G   TL ++ N  V+S G    G LG G  +  C +   I       +V+V      + 
Sbjct: 613 SGDAQTLAVTENGQVWSWGDGDYGKLGRG-GSDGCKTPKLIEKLQDLDIVKVRCGSQFSI 671

Query: 177 FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
            + + GQV+T G   +   GH  T   +  P+L+E LKG     V AG      LT    
Sbjct: 672 ALTKDGQVYTWGKGDNQRLGH-GTEEHVRYPKLLEGLKGKKVIDVAAGSTHCLALTEDSE 730

Query: 237 VHTCGSNTHGQLGHGDTL--DRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
           VH+ GSN   Q  H DTL   +P P ++  L +   +V IA GP+   A
Sbjct: 731 VHSWGSNDQCQ--HFDTLRVTKPEPAALPGL-DTKHIVGIACGPAQSFA 776



 Score = 45.8 bits (107), Expect = 0.045,   Method: Compositional matrix adjust.
 Identities = 49/184 (26%), Positives = 80/184 (43%), Gaps = 21/184 (11%)

Query: 299  FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG-- 356
            F     E+ D+ +       R+K       +AG E    + +   V+ WG      LG  
Sbjct: 2929 FLASDNEEEDDDKANTGSLVRKK-------AAGLESAATIRTK--VFVWGLNDKDQLGGL 2979

Query: 357  HGDEID-KTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVS 415
             G +I   +  E LS+L     VQV    +  F +   G VY  G    G LG    G+S
Sbjct: 2980 KGSKIKVPSFSETLSALN---VVQVAGGSKSLFAVTVEGKVYACGEATNGRLGL---GIS 3033

Query: 416  D-KVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLE 472
               V  PR + +L  + V +++  +G  H + +T  G++F +G+ +  +LGH +   C +
Sbjct: 3034 SGTVPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKVFSWGEGDDGKLGHFSRMNCDK 3093

Query: 473  PTEI 476
            P  I
Sbjct: 3094 PRLI 3097


>gi|410920940|ref|XP_003973941.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Takifugu rubripes]
          Length = 4822

 Score =  131 bits (329), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 94/326 (28%), Positives = 160/326 (49%), Gaps = 12/326 (3%)

Query: 161  SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQ 220
            SA +VVQV+        V   G+++ CG+ ++   G   ++  I  PR + AL     K+
Sbjct: 2976 SALNVVQVAGGSKSLFAVTVEGKIYACGEATNGRLGLGLSSGTIPIPRQITALSNYVVKK 3035

Query: 221  VT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGP 278
            V   +G      LT+ G V + G    G+LGH   ++   P+ I  L+    +  IA G 
Sbjct: 3036 VAVHSGGRHAMALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALK-TKRIRDIACGS 3094

Query: 279  SYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEHVV 336
            S+  A+T +G +YS+G G    LGHG+   +L+P+ ++     G  V++V+ G  D   +
Sbjct: 3095 SHSAAITSSGELYSWGLGEYGRLGHGDNATQLRPKLVKVLL--GHRVIQVACGSRDAQTL 3152

Query: 337  ALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSV 396
            AL   G V++WG G  G LG G      +P+ +  L      Q+    + +  L  +G V
Sbjct: 3153 ALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVV 3212

Query: 397  YGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGD 456
            + +G   +  LG    G    V +P++++ LR   +  ++ G  H + VTD G+++ +GD
Sbjct: 3213 WTWGKGDYFRLG---HGTDVHVRKPQMVEGLRGKKIVHVAVGALHCLAVTDTGQVYAWGD 3269

Query: 457  NERAQLGHDTLRGCLEPTEIFIQEME 482
            N+  Q G+ T     +PT   +Q +E
Sbjct: 3270 NDHGQQGNGTTTVNRKPT--LVQGLE 3293



 Score =  125 bits (313), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 91/288 (31%), Positives = 142/288 (49%), Gaps = 10/288 (3%)

Query: 183  QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 242
            +VF  G N     G    ++ I  P   E L  +   QV  G      +T+ G ++ CG 
Sbjct: 2946 KVFVWGLNDKDQLGGLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKIYACGE 3004

Query: 243  NTHGQLGHG-DTLDRPTPKSIAPLEE-VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 300
             T+G+LG G  +   P P+ I  L   V   V + +G  + +A+T +G V+S+G G +  
Sbjct: 3005 ATNGRLGLGLSSGTIPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKVFSWGEGDDGK 3064

Query: 301  LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 360
            LGH  + +  +PR I+  + K I    ++ G  H  A+ SSG +Y+WG G  G LGHGD 
Sbjct: 3065 LGHFSRMNCDKPRLIEALKTKRIR--DIACGSSHSAAITSSGELYSWGLGEYGRLGHGDN 3122

Query: 361  IDKTLPEPLSSLKSHLAVQVC--ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKV 418
              +  P+ +  L  H  +QV   +R  +T  L D G V+ +G   FG LG   RG S+  
Sbjct: 3123 ATQLRPKLVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLG---RGGSEGC 3179

Query: 419  LRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDT 466
              P+ ++ L    V QI  G   ++ +T  G ++ +G  +  +LGH T
Sbjct: 3180 NIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGT 3227



 Score =  121 bits (304), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 82/269 (30%), Positives = 131/269 (48%), Gaps = 6/269 (2%)

Query: 207  PRLVEALKGVPCKQV--TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP 264
            P L+E+++ V  ++V   +G      L+  G V++ G    G+LGHG+      P+ I  
Sbjct: 4016 PTLLESIQHVFIRKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIES 4075

Query: 265  LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH 324
            L  V  VV IAAG ++   +T +G ++++G G    LGHG+  D+L+P+ +   +   + 
Sbjct: 4076 LRGV-EVVDIAAGGAHSACITASGELFTWGKGRYGRLGHGDSEDQLKPKLVDALQGHRVI 4134

Query: 325  VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARK 384
             V   +GD   + L     V++WG G  G LG G      +P  + SL      +V    
Sbjct: 4135 DVACGSGDAQTLCLTDDDMVWSWGDGDYGKLGRGGSDGCKIPMKIDSLTGLGVTKVECGS 4194

Query: 385  RKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV 444
            + +  L  +G+VY +G   +  LG    G  D V RPR +  L+   V  I+TG  H V 
Sbjct: 4195 QFSVALTKSGAVYTWGKGDYHRLG---HGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 4251

Query: 445  VTDRGRLFGFGDNERAQLGHDTLRGCLEP 473
             T+ G ++ +GDN+  QLG  T      P
Sbjct: 4252 CTEDGEVYTWGDNDEGQLGDGTTNAIQRP 4280



 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 83/280 (29%), Positives = 139/280 (49%), Gaps = 9/280 (3%)

Query: 166  VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 225
            V V++   H   +   G+V++ G+      GH + + P  RPR++E+L+GV    + AG 
Sbjct: 4030 VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRS-PCDRPRVIESLRGVEVVDIAAGG 4088

Query: 226  NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA--AGPSYMLA 283
              +  +T  G + T G   +G+LGHGD+ D+  PK +  L+    V+ +A  +G +  L 
Sbjct: 4089 AHSACITASGELFTWGKGRYGRLGHGDSEDQLKPKLVDALQG-HRVIDVACGSGDAQTLC 4147

Query: 284  VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 343
            +T + +V+S+G G    LG G       P  I +    G+ V +V  G +  VAL  SG 
Sbjct: 4148 LTDDDMVWSWGDGDYGKLGRGGSDGCKIPMKIDSL--TGLGVTKVECGSQFSVALTKSGA 4205

Query: 344  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 403
            VYTWGKG    LGHG +     P  +  L+    + +           + G VY +G   
Sbjct: 4206 VYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDND 4265

Query: 404  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV 443
             G LG    G ++ + RPR++ +L+   +++++ G  HT+
Sbjct: 4266 EGQLG---DGTTNAIQRPRLVAALQGKKINRVACGSAHTL 4302



 Score =  115 bits (288), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 93/323 (28%), Positives = 148/323 (45%), Gaps = 24/323 (7%)

Query: 161 SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQ 220
           S+  V Q+  SE     +  SG V+T    S+              P L+ +L      +
Sbjct: 435 SSLGVTQIVCSEKGFLILSSSGAVYTQNYKST-----------TLAPMLIHSLSSRKIVK 483

Query: 221 VTAGLNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGS-VVQIA 275
           + A  +   +L +   G V + G    G+LGHGD      P  IA    ++ G  VV IA
Sbjct: 484 LAAHPDGQHYLALSSNGEVFSWGCGDGGRLGHGDATYLEEPTMIAAFNGKQAGKHVVHIA 543

Query: 276 AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS--AGDE 333
            G +Y   +T +G +Y++G G+   LGHG   D+  P  +     KG+ VV V+  +GD 
Sbjct: 544 CGSTYSAVITIDGELYTWGRGNYGRLGHGSSEDQTTPMLVTAL--KGLKVVDVACGSGDA 601

Query: 334 HVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDT 393
             +A+  +G V++WG G  G LG G       P+ +  L+    V+VC   + +  L   
Sbjct: 602 QTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLVEKLQDLDIVKVCCGSQFSVALTKD 661

Query: 394 GSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFG 453
           G VY +G      LG    G  + V  P++LD+L+   V  ++ G  H + +TD G +  
Sbjct: 662 GQVYTWGKGDNQRLG---HGTDEHVRFPKLLDTLQGKKVVDVAVGSTHCLALTDDGEVHS 718

Query: 454 FGDNERAQLGHDTLRGCLEPTEI 476
           +G N++ Q   DTL    +P  +
Sbjct: 719 WGSNDKLQ-HFDTLSNKKQPKAL 740



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 82/263 (31%), Positives = 126/263 (47%), Gaps = 16/263 (6%)

Query: 119 GRYHTLLISNSSVFSCGSSLCGVLGHG-----PETTQCVSFTRINFPSAAHVVQVSASEN 173
           G+++  L SN  VFS G    G LGHG      E T   +F      +  HVV ++    
Sbjct: 490 GQHYLALSSNGEVFSWGCGDGGRLGHGDATYLEEPTMIAAFN--GKQAGKHVVHIACGST 547

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
           ++A +   G+++T G  +    GH  +      P LV ALKG+    V  G      L +
Sbjct: 548 YSAVITIDGELYTWGRGNYGRLGHGSSEDQT-TPMLVTALKGLKVVDVACGSGDAQTLAV 606

Query: 234 --RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
              G V + G   +G+LG G +    TPK +  L+++  +V++  G  + +A+T +G VY
Sbjct: 607 TENGQVWSWGDGDYGKLGRGGSDGCKTPKLVEKLQDL-DIVKVCCGSQFSVALTKDGQVY 665

Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 351
           ++G G N  LGHG       P+ + T   +G  VV V+ G  H +AL   G V++WG   
Sbjct: 666 TWGKGDNQRLGHGTDEHVRFPKLLDTL--QGKKVVDVAVGSTHCLALTDDGEVHSWGSN- 722

Query: 352 CGALGHGDEI-DKTLPEPLSSLK 373
              L H D + +K  P+ L  LK
Sbjct: 723 -DKLQHFDTLSNKKQPKALPGLK 744



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 79/249 (31%), Positives = 119/249 (47%), Gaps = 8/249 (3%)

Query: 113  NMQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSAS 171
             + + +G  H L +S+   V+S G +  G LGHG   + C     I       VV ++A 
Sbjct: 4029 KVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHG-NRSPCDRPRVIESLRGVEVVDIAAG 4087

Query: 172  ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT--AGLNFTG 229
              H+A +  SG++FT G       GH D+   + +P+LV+AL+G     V   +G   T 
Sbjct: 4088 GAHSACITASGELFTWGKGRYGRLGHGDSEDQL-KPKLVDALQGHRVIDVACGSGDAQTL 4146

Query: 230  FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 289
             LT    V + G   +G+LG G +     P  I  L  +G V ++  G  + +A+T +G 
Sbjct: 4147 CLTDDDMVWSWGDGDYGKLGRGGSDGCKIPMKIDSLTGLG-VTKVECGSQFSVALTKSGA 4205

Query: 290  VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 349
            VY++G G    LGHG      +PR +Q    +G  V+ ++ G  H V     G VYTWG 
Sbjct: 4206 VYTWGKGDYHRLGHGSDDHVRRPRQVQGL--QGKKVIAIATGSLHCVCCTEDGEVYTWGD 4263

Query: 350  GYCGALGHG 358
               G LG G
Sbjct: 4264 NDEGQLGDG 4272



 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 75/247 (30%), Positives = 126/247 (51%), Gaps = 12/247 (4%)

Query: 235  GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
            G ++  G N  GQLG   G  +  PTP +++A L  V    Q+  G   + AVT +G +Y
Sbjct: 3940 GTIYGWGHNHRGQLGGIEGAKVKVPTPTEALATLRPV----QLIGGEQTLFAVTADGKLY 3995

Query: 292  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 351
            + G G+   LG G       P  +++ +   I  V V++G +H +AL S G VY+WG+  
Sbjct: 3996 ATGYGAGGRLGIGGTESVSTPTLLESIQHVFIRKVAVNSGGKHCLALSSEGEVYSWGEAE 4055

Query: 352  CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 411
             G LGHG+      P  + SL+    V + A    +  +  +G ++ +G   +G LG   
Sbjct: 4056 DGKLGHGNRSPCDRPRVIESLRGVEVVDIAAGGAHSACITASGELFTWGKGRYGRLG--- 4112

Query: 412  RGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG 469
             G S+  L+P+++D+L+ H V  ++  +G   T+ +TD   ++ +GD +  +LG     G
Sbjct: 4113 HGDSEDQLKPKLVDALQGHRVIDVACGSGDAQTLCLTDDDMVWSWGDGDYGKLGRGGSDG 4172

Query: 470  CLEPTEI 476
            C  P +I
Sbjct: 4173 CKIPMKI 4179



 Score = 98.2 bits (243), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 78/242 (32%), Positives = 113/242 (46%), Gaps = 7/242 (2%)

Query: 119  GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
            GR+   L  +  VFS G    G LGH      C     I       +  ++   +H+A +
Sbjct: 3042 GRHAMALTVDGKVFSWGEGDDGKLGHFSRMN-CDKPRLIEALKTKRIRDIACGSSHSAAI 3100

Query: 179  LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN--FTGFLTIRGH 236
              SG++++ G       GH D N    RP+LV+ L G    QV  G     T  LT  G 
Sbjct: 3101 TSSGELYSWGLGEYGRLGHGD-NATQLRPKLVKVLLGHRVIQVACGSRDAQTLALTDEGL 3159

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 296
            V + G    G+LG G +     P++I  L   G V QI  G  + LA+T +GVV+++G G
Sbjct: 3160 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTWGKG 3218

Query: 297  SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 356
              F LGHG      +P+ ++  R  G  +V V+ G  H +A+  +G VY WG    G  G
Sbjct: 3219 DYFRLGHGTDVHVRKPQMVEGLR--GKKIVHVAVGALHCLAVTDTGQVYAWGDNDHGQQG 3276

Query: 357  HG 358
            +G
Sbjct: 3277 NG 3278



 Score = 51.6 bits (122), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 41/173 (23%), Positives = 80/173 (46%), Gaps = 17/173 (9%)

Query: 306  QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTL 365
            +HDE   + +Q   R+          D+  ++   SG +Y WG  + G LG  +     +
Sbjct: 3916 EHDE---QLVQWMNRRP---------DDWTLSAGGSGTIYGWGHNHRGQLGGIEGAKVKV 3963

Query: 366  PEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILD 425
            P P  +L +   VQ+   ++  F +   G +Y     G+G+ G    G ++ V  P +L+
Sbjct: 3964 PTPTEALATLRPVQLIGGEQTLFAVTADGKLYA---TGYGAGGRLGIGGTESVSTPTLLE 4020

Query: 426  SLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 476
            S++   + +++  +G  H + ++  G ++ +G+ E  +LGH     C  P  I
Sbjct: 4021 SIQHVFIRKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVI 4073



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 48/167 (28%), Positives = 74/167 (44%), Gaps = 4/167 (2%)

Query: 118  TGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
            +G   TL L  +  V+S G    G LG G  +  C    +I+  +   V +V      + 
Sbjct: 4140 SGDAQTLCLTDDDMVWSWGDGDYGKLGRG-GSDGCKIPMKIDSLTGLGVTKVECGSQFSV 4198

Query: 177  FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
             + +SG V+T G       GH   +  + RPR V+ L+G     +  G       T  G 
Sbjct: 4199 ALTKSGAVYTWGKGDYHRLGHGSDDH-VRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGE 4257

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
            V+T G N  GQLG G T     P+ +A L+    + ++A G ++ LA
Sbjct: 4258 VYTWGDNDEGQLGDGTTNAIQRPRLVAALQG-KKINRVACGSAHTLA 4303


>gi|149043901|gb|EDL97352.1| rCG61079, isoform CRA_a [Rattus norvegicus]
          Length = 546

 Score =  131 bits (329), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 91/276 (32%), Positives = 142/276 (51%), Gaps = 10/276 (3%)

Query: 204 IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 263
           +  PR  +       + V  GL  T F+   G V+TCG N  GQLGH  +  R  P+ + 
Sbjct: 22  VLEPRKSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKS--RKKPEQVV 79

Query: 264 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLG-HGEQHDELQPRAIQTFRRKG 322
            L+   ++V ++ G ++ LA+   G VY++G  S+  LG  G +     PR I++     
Sbjct: 80  ALD-AQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSLSD-- 136

Query: 323 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK-TLPEPLSSLKSHLAVQVC 381
           I +V+V+ G  H +AL  +  V+ WG+   G LG G E  K T P+ + SL     +QV 
Sbjct: 137 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIECQKQTSPQLIKSLLGIPFMQVA 196

Query: 382 ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYH 441
           A    +FVL  +G+++G+G   FG LG  D   +D+ + P +L SLR+  +  I  G  H
Sbjct: 197 AGGAHSFVLTLSGAIFGWGRNKFGQLGLNDE--NDRYV-PNLLKSLRSQKIVYICCGEDH 253

Query: 442 TVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF 477
           T  +T  G +F FG     QLGH++    + P ++F
Sbjct: 254 TAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVF 289



 Score =  127 bits (319), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 145/311 (46%), Gaps = 12/311 (3%)

Query: 156 RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 215
           + +F     V  V     H  FVL  G V+TCG N     GH  + +   +P  V AL  
Sbjct: 27  KSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRK---KPEQVVALDA 83

Query: 216 VPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLG-HGDTLDRPTPKSIAPLEEVGSVVQI 274
                V+ G   T  L  +G V+  G ++ GQLG  G       P++I  L ++  +VQ+
Sbjct: 84  QNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSLSDI-QIVQV 142

Query: 275 AAGPSYMLAVTGNGVVYSFGSGSNFCLGHG-EQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           A G  + LA++    V+ +G      LG G E   +  P+ I++    GI  ++V+AG  
Sbjct: 143 ACGYYHSLALSKASEVFCWGQNKYGQLGLGIECQKQTSPQLIKSLL--GIPFMQVAAGGA 200

Query: 334 HVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDT 393
           H   L  SG ++ WG+   G LG  DE D+ +P  L SL+S   V +C  +  T  L   
Sbjct: 201 HSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKE 260

Query: 394 GSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHT-VVVTDRGRLF 452
           G V+ FG  G+G LG      +   + PR +  L    V+QI+ G  HT   V   GR++
Sbjct: 261 GGVFTFGAGGYGQLG---HNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIY 317

Query: 453 GFGDNERAQLG 463
            FG     QLG
Sbjct: 318 SFGLGGNGQLG 328



 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 79/291 (27%), Positives = 138/291 (47%), Gaps = 8/291 (2%)

Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 179
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V VS  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVSCGEAHTLALN 100

Query: 180 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 239
             GQV+  G +S    G + +   I  PR +++L  +   QV  G   +  L+    V  
Sbjct: 101 DKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFC 160

Query: 240 CGSNTHGQLGHGDTLDRPT-PKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
            G N +GQLG G    + T P+ I  L  +   +Q+AAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKYGQLGLGIECQKQTSPQLIKSLLGI-PFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 299 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 358
             LG  +++D   P  +++ R +   +V +  G++H  AL   G V+T+G G  G LGH 
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRSQ--KIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHN 277

Query: 359 DEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLG 408
               +  P  +  L   +  Q+ C R+  +  +  +G +Y FG  G G LG
Sbjct: 278 STSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 84/274 (30%), Positives = 132/274 (48%), Gaps = 10/274 (3%)

Query: 98  QSVEHSSDIVETSAGNM-QITTGRYHTLLISNS-SVFSCGSSLCGVLG-HGPETTQCVSF 154
           +S +    +V   A N+  ++ G  HTL +++   V++ G    G LG  G E  +C+  
Sbjct: 70  KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLQGSE--ECIRV 127

Query: 155 TR-INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEAL 213
            R I   S   +VQV+    H+  + ++ +VF  G N     G     +    P+L+++L
Sbjct: 128 PRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIECQKQTSPQLIKSL 187

Query: 214 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
            G+P  QV AG   +  LT+ G +   G N  GQLG  D  DR  P  +  L     +V 
Sbjct: 188 LGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQ-KIVY 246

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           I  G  +  A+T  G V++FG+G    LGH     E+ PR +  F   G  V +++ G +
Sbjct: 247 ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQ 304

Query: 334 HVVA-LDSSGYVYTWGKGYCGALGHGDEIDKTLP 366
           H  A + SSG +Y++G G  G LG G   ++  P
Sbjct: 305 HTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338



 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 72/229 (31%), Positives = 109/229 (47%), Gaps = 11/229 (4%)

Query: 91  KRVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETT 149
           +  +R  ++++  SDI       +Q+  G YH+L +S +S VF  G +  G LG G E  
Sbjct: 122 EECIRVPRNIKSLSDIQI-----VQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIECQ 176

Query: 150 QCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRL 209
           +  S   I        +QV+A   H+  +  SG +F  G N     G  D N   + P L
Sbjct: 177 KQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDR-YVPNL 235

Query: 210 VEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG 269
           +++L+      +  G + T  LT  G V T G+  +GQLGH  T     P+ +   E +G
Sbjct: 236 LKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMG 293

Query: 270 SVV-QIAAGPSYMLA-VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQ 316
           S+V QIA G  +  A V  +G +YSFG G N  LG G   +   P  ++
Sbjct: 294 SIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342


>gi|354489070|ref|XP_003506687.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
            HERC2-like [Cricetulus griseus]
          Length = 4836

 Score =  131 bits (329), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 96/328 (29%), Positives = 159/328 (48%), Gaps = 16/328 (4%)

Query: 161  SAAHVVQVSASENHAAFVLQSGQVFTCGD--NSSFCCGHRDTNRPIFRPRLVEALKGVPC 218
            SA +VVQV+        V   G+V++CG+  N     G      PI  PR + AL     
Sbjct: 2991 SALNVVQVAGGSKSLFAVTVEGKVYSCGEATNGRLGLGMSSGTVPI--PRQITALSSYVV 3048

Query: 219  KQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA 276
            K+V   +G      LT+ G V + G    G+LGH   ++   P+ I  L+    +  IA 
Sbjct: 3049 KKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALK-TKRIRDIAC 3107

Query: 277  GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEH 334
            G S+  A+T +G +Y++G G    LGHG+   +L+P+ ++     G  V++V+ G  D  
Sbjct: 3108 GSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLL--GHRVIQVACGSRDAQ 3165

Query: 335  VVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 394
             +AL   G V++WG G  G LG G      +P+ +  L      Q+    + +  L  +G
Sbjct: 3166 TLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSG 3225

Query: 395  SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 454
             V+ +G   +  LG    G    V +P++++ LR   +  ++ G  H + VTD G+++ +
Sbjct: 3226 VVWTWGKGDYFRLG---HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAW 3282

Query: 455  GDNERAQLGHDTLRGCLEPTEIFIQEME 482
            GDN+  Q G+ T     +PT   +Q +E
Sbjct: 3283 GDNDHGQQGNGTTTVNRKPT--LVQGLE 3308



 Score =  126 bits (316), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 93/286 (32%), Positives = 141/286 (49%), Gaps = 10/286 (3%)

Query: 183  QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 242
            +VF  G N     G    ++ I  P   E L  +   QV  G      +T+ G V++CG 
Sbjct: 2961 KVFVWGLNDKDQLGGLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYSCGE 3019

Query: 243  NTHGQLGHG-DTLDRPTPKSIAPLEE-VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 300
             T+G+LG G  +   P P+ I  L   V   V + +G  +  A+T +G V+S+G G +  
Sbjct: 3020 ATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGK 3079

Query: 301  LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 360
            LGH  + +  +PR I+  + K I    ++ G  H  AL SSG +YTWG G  G LGHGD 
Sbjct: 3080 LGHFSRMNCDKPRLIEALKTKRIR--DIACGSSHSAALTSSGELYTWGLGEYGRLGHGDN 3137

Query: 361  IDKTLPEPLSSLKSHLAVQVC--ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKV 418
              +  P+ +  L  H  +QV   +R  +T  L D G V+ +G   FG LG   RG S+  
Sbjct: 3138 TTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLG---RGGSEGC 3194

Query: 419  LRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 464
              P+ ++ L    V QI  G   ++ +T  G ++ +G  +  +LGH
Sbjct: 3195 NIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGH 3240



 Score =  121 bits (304), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 85/280 (30%), Positives = 139/280 (49%), Gaps = 9/280 (3%)

Query: 166  VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 225
            V V++   H   +   G+V++ G+      GH + + P  RPR++E+L+G+    V AG 
Sbjct: 4044 VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRS-PCDRPRVIESLRGIEVVDVAAGG 4102

Query: 226  NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA--AGPSYMLA 283
              +  +T  G ++T G   +G+LGH D+ D+  PK +  L+    V+ IA  +G +  L 
Sbjct: 4103 AHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQG-HRVIDIACGSGDAQTLC 4161

Query: 284  VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 343
            +T +  V+S+G G    LG G       P  I +    G+ VV+V  G +  VAL  SG 
Sbjct: 4162 LTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL--TGLGVVKVECGSQFSVALTKSGA 4219

Query: 344  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 403
            VYTWGKG    LGHG +     P  +  L+    + +           + G VY +G   
Sbjct: 4220 VYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDND 4279

Query: 404  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV 443
             G LG    G ++ + RPR++ +L+   V++++ G  HT+
Sbjct: 4280 EGQLG---DGTTNAIQRPRLVAALQGKKVNRVACGSAHTL 4316



 Score =  121 bits (304), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 82/269 (30%), Positives = 131/269 (48%), Gaps = 6/269 (2%)

Query: 207  PRLVEALKGVPCKQV--TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP 264
            P L+E+++ V  K+V   +G      L+  G V++ G    G+LGHG+      P+ I  
Sbjct: 4030 PTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIES 4089

Query: 265  LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH 324
            L  +  VV +AAG ++   VT  G +Y++G G    LGH +  D+L+P+ ++  +   + 
Sbjct: 4090 LRGI-EVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVI 4148

Query: 325  VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARK 384
             +   +GD   + L     V++WG G  G LG G      +P  + SL     V+V    
Sbjct: 4149 DIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGS 4208

Query: 385  RKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV 444
            + +  L  +G+VY +G   +  LG    G  D V RPR +  L+   V  I+TG  H V 
Sbjct: 4209 QFSVALTKSGAVYTWGKGDYHRLG---HGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 4265

Query: 445  VTDRGRLFGFGDNERAQLGHDTLRGCLEP 473
             T+ G ++ +GDN+  QLG  T      P
Sbjct: 4266 CTEDGEVYTWGDNDEGQLGDGTTNAIQRP 4294



 Score =  119 bits (297), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 90/311 (28%), Positives = 151/311 (48%), Gaps = 24/311 (7%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V+QV+ +E     + ++G+V+T   NS            +  P+LV+ L      ++ A 
Sbjct: 454 VMQVACAEKRFLILSRNGRVYTQAYNSD-----------MLAPQLVQGLASRNIVKIAAH 502

Query: 225 LNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGS-VVQIAAGPS 279
            +   +L +   G V++ G    G+LGHGDT+    PK I+    ++ G  VV IA G +
Sbjct: 503 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGST 562

Query: 280 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS--AGDEHVVA 337
           Y  A+T  G +Y++G G+   LGHG   DE  P  +     KG+ V+ V+  +GD   +A
Sbjct: 563 YSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGL--KGLKVIDVACGSGDAQTLA 620

Query: 338 LDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVY 397
           +  +G V++WG G  G LG G       P+ +  L+    ++V    + +  L   G VY
Sbjct: 621 VTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVIKVRCGSQFSIALTKDGQVY 680

Query: 398 GFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDN 457
            +G      LG    G  + V  P++L+ L+   V  ++ G  H + +T+   +  +G N
Sbjct: 681 SWGKGDNQRLG---HGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSN 737

Query: 458 ERAQLGHDTLR 468
           ++ Q   DTLR
Sbjct: 738 DQCQ-HFDTLR 747



 Score =  102 bits (253), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 84/265 (31%), Positives = 126/265 (47%), Gaps = 12/265 (4%)

Query: 96   FLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFT 155
             L+S++H    ++  A N   + G++   L S   V+S G +  G LGHG   + C    
Sbjct: 4032 LLESIQHV--FIKKVAVN---SGGKHCLALSSEGEVYSWGEAEDGKLGHG-NRSPCDRPR 4085

Query: 156  RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 215
             I       VV V+A   H+A V  +G ++T G       GH D+   + +P+LVEAL+G
Sbjct: 4086 VIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQL-KPKLVEALQG 4144

Query: 216  VPCKQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
                 +   +G   T  LT    V + G   +G+LG G +     P  I  L  +G VV+
Sbjct: 4145 HRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLG-VVK 4203

Query: 274  IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
            +  G  + +A+T +G VY++G G    LGHG      +PR +Q    +G  V+ ++ G  
Sbjct: 4204 VECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGL--QGKKVIAIATGSL 4261

Query: 334  HVVALDSSGYVYTWGKGYCGALGHG 358
            H V     G VYTWG    G LG G
Sbjct: 4262 HCVCCTEDGEVYTWGDNDEGQLGDG 4286



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 77/247 (31%), Positives = 125/247 (50%), Gaps = 12/247 (4%)

Query: 235  GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
            G ++  G N  GQLG   G  +  PTP +++A L  V    Q+  G   + AVT +G +Y
Sbjct: 3954 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPV----QLIGGEQTLFAVTADGKLY 4009

Query: 292  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 351
            + G G+   LG G       P  +++ +   I  V V++G +H +AL S G VY+WG+  
Sbjct: 4010 ATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAE 4069

Query: 352  CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 411
             G LGHG+      P  + SL+    V V A    +  +   G +Y +G   +G LG  D
Sbjct: 4070 DGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD 4129

Query: 412  RGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG 469
               S+  L+P+++++L+ H V  I+  +G   T+ +TD   ++ +GD +  +LG     G
Sbjct: 4130 ---SEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDG 4186

Query: 470  CLEPTEI 476
            C  P +I
Sbjct: 4187 CKVPMKI 4193



 Score = 99.8 bits (247), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 79/242 (32%), Positives = 114/242 (47%), Gaps = 7/242 (2%)

Query: 119  GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
            GR+ T L  +  VFS G    G LGH      C     I       +  ++   +H+A +
Sbjct: 3057 GRHATALTVDGKVFSWGEGDDGKLGHFSRMN-CDKPRLIEALKTKRIRDIACGSSHSAAL 3115

Query: 179  LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN--FTGFLTIRGH 236
              SG+++T G       GH D N    +P++V+ L G    QV  G     T  LT  G 
Sbjct: 3116 TSSGELYTWGLGEYGRLGHGD-NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 3174

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 296
            V + G    G+LG G +     P++I  L   G V QI  G  + LA+T +GVV+++G G
Sbjct: 3175 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTWGKG 3233

Query: 297  SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 356
              F LGHG      +P+ ++  R  G  +V V+ G  H +A+  SG VY WG    G  G
Sbjct: 3234 DYFRLGHGSDVHVRKPQVVEGLR--GKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQG 3291

Query: 357  HG 358
            +G
Sbjct: 3292 NG 3293



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 79/275 (28%), Positives = 128/275 (46%), Gaps = 23/275 (8%)

Query: 103 SSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHG-------PETTQCVSFT 155
           S +IV+ +A     + G ++  L +   V+S G    G LGHG       P+     S  
Sbjct: 493 SRNIVKIAAH----SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGK 548

Query: 156 RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 215
           +    +  HVV ++    ++A +   G+++T G  +    GH  +      P LV  LKG
Sbjct: 549 Q----AGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAI-PMLVAGLKG 603

Query: 216 VPCKQVTAGLNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
           +    V  G      L +   G V + G   +G+LG G +    TPK I  L+++  V++
Sbjct: 604 LKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL-DVIK 662

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           +  G  + +A+T +G VYS+G G N  LGHG +     P+ ++    +G  V+ V+AG  
Sbjct: 663 VRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGL--QGKKVIDVAAGST 720

Query: 334 HVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEP 368
           H +AL     V++WG        H D +  T PEP
Sbjct: 721 HCLALTEDSEVHSWGSN--DQCQHFDTLRVTKPEP 753



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 66/225 (29%), Positives = 100/225 (44%), Gaps = 8/225 (3%)

Query: 116  ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
            I  G  H+  L S+  +++ G    G LGHG  TTQ +    +       V+QV+     
Sbjct: 3105 IACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQ-LKPKMVKVLLGHRVIQVACGSRD 3163

Query: 175  AA--FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            A    +   G VF+ GD      G R  +     P+ +E L G    Q+  G  F+  LT
Sbjct: 3164 AQTLALTDEGLVFSWGDGDFGKLG-RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALT 3222

Query: 233  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
              G V T G   + +LGHG  +    P+ +  L     +V +A G  + LAVT +G VY+
Sbjct: 3223 KSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRG-KKIVHVAVGALHCLAVTDSGQVYA 3281

Query: 293  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
            +G   +   G+G      +P  +Q    +G  + RV+ G  H VA
Sbjct: 3282 WGDNDHGQQGNGTTTVNRKPTLVQGL--EGQKITRVACGSSHSVA 3324



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 50/167 (29%), Positives = 76/167 (45%), Gaps = 4/167 (2%)

Query: 118  TGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
            +G   TL L  + +V+S G    G LG G  +  C    +I+  +   VV+V      + 
Sbjct: 4154 SGDAQTLCLTDDDTVWSWGDGDYGKLGRG-GSDGCKVPMKIDSLTGLGVVKVECGSQFSV 4212

Query: 177  FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
             + +SG V+T G       GH   +  + RPR V+ L+G     +  G       T  G 
Sbjct: 4213 ALTKSGAVYTWGKGDYHRLGHGSDDH-VRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGE 4271

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
            V+T G N  GQLG G T     P+ +A L+    V ++A G ++ LA
Sbjct: 4272 VYTWGDNDEGQLGDGTTNAIQRPRLVAALQG-KKVNRVACGSAHTLA 4317



 Score = 52.0 bits (123), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 36/147 (24%), Positives = 71/147 (48%), Gaps = 5/147 (3%)

Query: 332  DEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 391
            D+  ++   SG +Y WG  + G LG  +     +P P  +L +   VQ+   ++  F + 
Sbjct: 3944 DDWTLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVT 4003

Query: 392  DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRG 449
              G +Y     G+G+ G    G ++ V  P +L+S++   + +++  +G  H + ++  G
Sbjct: 4004 ADGKLYA---TGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 4060

Query: 450  RLFGFGDNERAQLGHDTLRGCLEPTEI 476
             ++ +G+ E  +LGH     C  P  I
Sbjct: 4061 EVYSWGEAEDGKLGHGNRSPCDRPRVI 4087



 Score = 44.3 bits (103), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 41/139 (29%), Positives = 65/139 (46%), Gaps = 12/139 (8%)

Query: 344  VYTWGKGYCGALG--HGDEID-KTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 400
            V+ WG      LG   G +I   +  E LS+L     VQV    +  F +   G VY  G
Sbjct: 2962 VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALN---VVQVAGGSKSLFAVTVEGKVYSCG 3018

Query: 401  WMGFGSLGFPDRGVSD-KVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDN 457
                G LG    G+S   V  PR + +L ++ V +++  +G  H   +T  G++F +G+ 
Sbjct: 3019 EATNGRLGL---GMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEG 3075

Query: 458  ERAQLGHDTLRGCLEPTEI 476
            +  +LGH +   C +P  I
Sbjct: 3076 DDGKLGHFSRMNCDKPRLI 3094


>gi|224043006|ref|XP_002197493.1| PREDICTED: E3 ubiquitin-protein ligase HERC2 [Taeniopygia guttata]
          Length = 4839

 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 96/328 (29%), Positives = 158/328 (48%), Gaps = 16/328 (4%)

Query: 161  SAAHVVQVSASENHAAFVLQSGQVFTCGD--NSSFCCGHRDTNRPIFRPRLVEALKGVPC 218
            SA +VVQV+        V   G+V+ CG+  N     G      PI  PR + AL     
Sbjct: 2994 SALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPI--PRQITALSNYVV 3051

Query: 219  KQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA 276
            K+V   +G      LT+ G V + G    G+LGH   ++   P+ I  L+    +  IA 
Sbjct: 3052 KKVAVHSGGRHAMALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALK-TKRIRDIAC 3110

Query: 277  GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEH 334
            G S+  A+T +G +Y++G G    LGHG+   +L+P+ ++     G  V++V+ G  D  
Sbjct: 3111 GSSHSAAITSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLL--GHRVIQVACGSRDAQ 3168

Query: 335  VVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 394
             +AL   G V++WG G  G LG G      +P+ +  L      Q+    + +  L  +G
Sbjct: 3169 TLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSG 3228

Query: 395  SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 454
             V+ +G   +  LG    G    V +P++++ LR   +  ++ G  H + VTD G+++ +
Sbjct: 3229 VVWTWGKGDYFRLG---HGTDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDTGQVYAW 3285

Query: 455  GDNERAQLGHDTLRGCLEPTEIFIQEME 482
            GDN+  Q G+ T     +PT   +Q +E
Sbjct: 3286 GDNDHGQQGNGTTTVNRKPT--LVQGLE 3311



 Score =  129 bits (324), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 97/311 (31%), Positives = 154/311 (49%), Gaps = 11/311 (3%)

Query: 160  PSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCK 219
            P+   +V+  A+   +A  +++ +VF  G N     G    ++ I  P   E L  +   
Sbjct: 2942 PNTGSLVRKKAAGLESAATIRT-KVFVWGLNDKDQLGGLKGSK-IKVPSFSETLSALNVV 2999

Query: 220  QVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHG-DTLDRPTPKSIAPLEE-VGSVVQIAAG 277
            QV  G      +T+ G V+ CG  T+G+LG G  +   P P+ I  L   V   V + +G
Sbjct: 3000 QVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSNYVVKKVAVHSG 3059

Query: 278  PSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
              + +A+T +G V+S+G G +  LGH  + +  +PR I+  + K I    ++ G  H  A
Sbjct: 3060 GRHAMALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIR--DIACGSSHSAA 3117

Query: 338  LDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVC--ARKRKTFVLVDTGS 395
            + SSG +YTWG G  G LGHGD   +  P+ +  L  H  +QV   +R  +T  L D G 
Sbjct: 3118 ITSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 3177

Query: 396  VYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFG 455
            V+ +G   FG LG   RG S+    P+ ++ L    V QI  G   ++ +T  G ++ +G
Sbjct: 3178 VFSWGDGDFGKLG---RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWG 3234

Query: 456  DNERAQLGHDT 466
              +  +LGH T
Sbjct: 3235 KGDYFRLGHGT 3245



 Score =  123 bits (308), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 82/269 (30%), Positives = 132/269 (49%), Gaps = 6/269 (2%)

Query: 207  PRLVEALKGVPCKQV--TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP 264
            P L+E+++ V  K+V   +G      L+  G V++ G    G+LGHG+      P+ I  
Sbjct: 4033 PTLLESIQHVFIKKVAVNSGGKHCLALSFEGEVYSWGEAEDGKLGHGNRSPCDRPRVIES 4092

Query: 265  LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH 324
            L  +  VV IAAG ++   +T  G ++++G G    LGHG+  D+L+P+ ++  +   + 
Sbjct: 4093 LRGI-EVVDIAAGGAHSACITAAGDLFTWGKGRYGRLGHGDSEDQLKPKLVEALQGYRVI 4151

Query: 325  VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARK 384
             +   +GD   + L     V++WG G  G LG G      +P  + SL     V+V    
Sbjct: 4152 DIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGS 4211

Query: 385  RKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV 444
            + +  L  +G+VY +G   +  LG    G  D V RPR +  L+   V  I+TG  H V 
Sbjct: 4212 QFSVALTKSGAVYTWGKGDYHRLG---HGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 4268

Query: 445  VTDRGRLFGFGDNERAQLGHDTLRGCLEP 473
             T+ G ++ +GDN+  QLG  T      P
Sbjct: 4269 CTEDGEVYTWGDNDEGQLGDGTTNAIQRP 4297



 Score =  121 bits (304), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 84/280 (30%), Positives = 139/280 (49%), Gaps = 9/280 (3%)

Query: 166  VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 225
            V V++   H   +   G+V++ G+      GH + + P  RPR++E+L+G+    + AG 
Sbjct: 4047 VAVNSGGKHCLALSFEGEVYSWGEAEDGKLGHGNRS-PCDRPRVIESLRGIEVVDIAAGG 4105

Query: 226  NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA--AGPSYMLA 283
              +  +T  G + T G   +G+LGHGD+ D+  PK +  L+    V+ IA  +G +  L 
Sbjct: 4106 AHSACITAAGDLFTWGKGRYGRLGHGDSEDQLKPKLVEALQGY-RVIDIACGSGDAQTLC 4164

Query: 284  VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 343
            +T +  V+S+G G    LG G       P  I +    G+ VV+V  G +  VAL  SG 
Sbjct: 4165 LTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL--TGLGVVKVECGSQFSVALTKSGA 4222

Query: 344  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 403
            VYTWGKG    LGHG +     P  +  L+    + +           + G VY +G   
Sbjct: 4223 VYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDND 4282

Query: 404  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV 443
             G LG    G ++ + RPR++ +L+   +++++ G  HT+
Sbjct: 4283 EGQLG---DGTTNAIQRPRLVAALQGKKINRVACGSAHTL 4319



 Score =  119 bits (297), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 94/311 (30%), Positives = 153/311 (49%), Gaps = 24/311 (7%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V+QV+ +E     + ++G+V+T   NS       DT      P+LV++L      ++ A 
Sbjct: 454 VMQVACAEKRFLILSRNGRVYTQAYNS-------DT----LGPQLVQSLASRNIVKIAAH 502

Query: 225 LNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGS-VVQIAAGPS 279
            +   +L +   G V + G    G+LGHGDT+    PK I+ L  ++ G  VV IA G +
Sbjct: 503 SDGHHYLALSANGEVFSWGCGDGGRLGHGDTVPLEEPKMISALSGKQAGKHVVHIACGST 562

Query: 280 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS--AGDEHVVA 337
           Y  A+T  G +Y++G G+   LGHG   D+  P  +     KG+ V+ VS  +GD   +A
Sbjct: 563 YSAAITAEGELYTWGRGNYGRLGHGSSEDQTIPMLVTGL--KGLKVIDVSCGSGDAQTLA 620

Query: 338 LDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVY 397
           +  +G V++WG G  G LG G       P+ +  L+    V+V    + +  L   G VY
Sbjct: 621 VTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDIVKVRCGSQFSIALTKDGQVY 680

Query: 398 GFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDN 457
            +G      LG    G  + V  P++L+ L+   V  ++ G  H + +T+   +  +G N
Sbjct: 681 TWGKGDNQRLG---HGTEEHVRYPKLLEGLKGKKVIDVAAGSTHCLALTEDSEVHSWGSN 737

Query: 458 ERAQLGHDTLR 468
           ++ Q   DTLR
Sbjct: 738 DQCQ-HFDTLR 747



 Score =  101 bits (252), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 83/283 (29%), Positives = 136/283 (48%), Gaps = 24/283 (8%)

Query: 95  RFLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHG-------PE 147
           + +QS+  S +IV+ +A     + G ++  L +N  VFS G    G LGHG       P+
Sbjct: 486 QLVQSLA-SRNIVKIAAH----SDGHHYLALSANGEVFSWGCGDGGRLGHGDTVPLEEPK 540

Query: 148 TTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRP 207
               +S  +    +  HVV ++    ++A +   G+++T G  +    GH  +      P
Sbjct: 541 MISALSGKQ----AGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDQTI-P 595

Query: 208 RLVEALKGVPCKQVTAGLNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL 265
            LV  LKG+    V+ G      L +   G V + G   +G+LG G +    TPK I  L
Sbjct: 596 MLVTGLKGLKVIDVSCGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKL 655

Query: 266 EEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHV 325
           +++  +V++  G  + +A+T +G VY++G G N  LGHG +     P+ ++    KG  V
Sbjct: 656 QDL-DIVKVRCGSQFSIALTKDGQVYTWGKGDNQRLGHGTEEHVRYPKLLEGL--KGKKV 712

Query: 326 VRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEP 368
           + V+AG  H +AL     V++WG        H D +  T PEP
Sbjct: 713 IDVAAGSTHCLALTEDSEVHSWGSN--DQCQHFDTLRITKPEP 753



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 77/242 (31%), Positives = 113/242 (46%), Gaps = 7/242 (2%)

Query: 119  GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
            GR+   L  +  VFS G    G LGH      C     I       +  ++   +H+A +
Sbjct: 3060 GRHAMALTVDGKVFSWGEGDDGKLGHF-SRMNCDKPRLIEALKTKRIRDIACGSSHSAAI 3118

Query: 179  LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN--FTGFLTIRGH 236
              SG+++T G       GH D N    +P++V+ L G    QV  G     T  LT  G 
Sbjct: 3119 TSSGELYTWGLGEYGRLGHGD-NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 3177

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 296
            V + G    G+LG G +     P++I  L   G V QI  G  + LA+T +GVV+++G G
Sbjct: 3178 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTWGKG 3236

Query: 297  SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 356
              F LGHG      +P+ ++  R  G  +V V+ G  H +A+  +G VY WG    G  G
Sbjct: 3237 DYFRLGHGTDVHVRKPQVVEGLR--GKKIVHVAVGALHCLAVTDTGQVYAWGDNDHGQQG 3294

Query: 357  HG 358
            +G
Sbjct: 3295 NG 3296



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 73/247 (29%), Positives = 124/247 (50%), Gaps = 12/247 (4%)

Query: 235  GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
            G ++  G N  GQLG   G  +  PTP +++A L  V    Q+  G   + AVT +G +Y
Sbjct: 3957 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPV----QLIGGEQTLFAVTADGKLY 4012

Query: 292  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 351
            + G G+   LG G       P  +++ +   I  V V++G +H +AL   G VY+WG+  
Sbjct: 4013 ATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSFEGEVYSWGEAE 4072

Query: 352  CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 411
             G LGHG+      P  + SL+    V + A    +  +   G ++ +G   +G LG   
Sbjct: 4073 DGKLGHGNRSPCDRPRVIESLRGIEVVDIAAGGAHSACITAAGDLFTWGKGRYGRLG--- 4129

Query: 412  RGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG 469
             G S+  L+P+++++L+ + V  I+  +G   T+ +TD   ++ +GD +  +LG     G
Sbjct: 4130 HGDSEDQLKPKLVEALQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDG 4189

Query: 470  CLEPTEI 476
            C  P +I
Sbjct: 4190 CKVPMKI 4196



 Score = 78.6 bits (192), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 58/219 (26%), Positives = 103/219 (47%), Gaps = 21/219 (9%)

Query: 271 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 330
           V+Q+A      L ++ NG VY+    S          D L P+ +Q+   + I  +   +
Sbjct: 454 VMQVACAEKRFLILSRNGRVYTQAYNS----------DTLGPQLVQSLASRNIVKIAAHS 503

Query: 331 GDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLA----VQVCARKRK 386
              H +AL ++G V++WG G  G LGHGD +    P+ +S+L    A    V +      
Sbjct: 504 DGHHYLALSANGEVFSWGCGDGGRLGHGDTVPLEEPKMISALSGKQAGKHVVHIACGSTY 563

Query: 387 TFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVV 444
           +  +   G +Y +G   +G LG    G S+    P ++  L+   V  +S  +G   T+ 
Sbjct: 564 SAAITAEGELYTWGRGNYGRLG---HGSSEDQTIPMLVTGLKGLKVIDVSCGSGDAQTLA 620

Query: 445 VTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQEMEE 483
           VT+ G+++ +GD +  +LG     GC  P    I+++++
Sbjct: 621 VTENGQVWSWGDGDYGKLGRGGSDGCKTPK--LIEKLQD 657



 Score = 68.9 bits (167), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 76/301 (25%), Positives = 119/301 (39%), Gaps = 66/301 (21%)

Query: 96   FLQSVEHSSDIVETSAGNMQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSF 154
             L+S++H           + + +G  H L +S    V+S G +  G LGHG   + C   
Sbjct: 4035 LLESIQH------VFIKKVAVNSGGKHCLALSFEGEVYSWGEAEDGKLGHG-NRSPCDRP 4087

Query: 155  TRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALK 214
              I       VV ++A   H+A +  +G +FT G       GH D+   + +P+LVEAL+
Sbjct: 4088 RVIESLRGIEVVDIAAGGAHSACITAAGDLFTWGKGRYGRLGHGDSEDQL-KPKLVEALQ 4146

Query: 215  G--------------------------------------------VPCK----------Q 220
            G                                            VP K          +
Sbjct: 4147 GYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVK 4206

Query: 221  VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 280
            V  G  F+  LT  G V+T G   + +LGHG       P+ +  L+    V+ IA G  +
Sbjct: 4207 VECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQG-KKVIAIATGSLH 4265

Query: 281  MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 340
             +  T +G VY++G      LG G  +   +PR +   + K I+  RV+ G  H +A  +
Sbjct: 4266 CVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKIN--RVACGSAHTLAWST 4323

Query: 341  S 341
            S
Sbjct: 4324 S 4324



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 66/225 (29%), Positives = 100/225 (44%), Gaps = 8/225 (3%)

Query: 116  ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
            I  G  H+  I++S  +++ G    G LGHG  TTQ +    +       V+QV+     
Sbjct: 3108 IACGSSHSAAITSSGELYTWGLGEYGRLGHGDNTTQ-LKPKMVKVLLGHRVIQVACGSRD 3166

Query: 175  AA--FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            A    +   G VF+ GD      G R  +     P+ +E L G    Q+  G  F+  LT
Sbjct: 3167 AQTLALTDEGLVFSWGDGDFGKLG-RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALT 3225

Query: 233  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
              G V T G   + +LGHG  +    P+ +  L     +V +A G  + LAVT  G VY+
Sbjct: 3226 KSGVVWTWGKGDYFRLGHGTDVHVRKPQVVEGLRG-KKIVHVAVGALHCLAVTDTGQVYA 3284

Query: 293  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
            +G   +   G+G      +P  +Q    +G  + RV+ G  H VA
Sbjct: 3285 WGDNDHGQQGNGTTTVNRKPTLVQGL--EGQKITRVACGSSHSVA 3327



 Score = 55.8 bits (133), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 53/169 (31%), Positives = 76/169 (44%), Gaps = 8/169 (4%)

Query: 118 TGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
           +G   TL ++ N  V+S G    G LG G  +  C +   I       +V+V      + 
Sbjct: 613 SGDAQTLAVTENGQVWSWGDGDYGKLGRG-GSDGCKTPKLIEKLQDLDIVKVRCGSQFSI 671

Query: 177 FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
            + + GQV+T G   +   GH  T   +  P+L+E LKG     V AG      LT    
Sbjct: 672 ALTKDGQVYTWGKGDNQRLGH-GTEEHVRYPKLLEGLKGKKVIDVAAGSTHCLALTEDSE 730

Query: 237 VHTCGSNTHGQLGHGDTL--DRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
           VH+ GSN   Q  H DTL   +P P ++  L +   +V IA GP+   A
Sbjct: 731 VHSWGSNDQCQ--HFDTLRITKPEPAALPGL-DTKHIVGIACGPAQSFA 776


>gi|432906474|ref|XP_004077549.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like [Oryzias
           latipes]
          Length = 1059

 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 91/276 (32%), Positives = 142/276 (51%), Gaps = 10/276 (3%)

Query: 204 IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 263
           +  PR  E   G   + V  G   T FL   G V+TCG N  GQLGH  +  R  P+ + 
Sbjct: 22  VVEPRKCEFFHGKRVRDVGCGRRHTAFLLEDGTVYTCGCNDLGQLGHEKS--RKKPEQVV 79

Query: 264 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQ-PRAIQTFRRKG 322
            L+    +V ++ G S+ LA+   G V+S+G GS+  LG     + ++ PR I++     
Sbjct: 80  ALD-AQIIVALSCGESHTLALNDKGQVFSWGLGSDGQLGLNNFEECIRVPRNIKSL--SD 136

Query: 323 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK-TLPEPLSSLKSHLAVQVC 381
           + V +V+ G  H +AL   G++++WG+   G LG G      ++P+ L SL+     Q+ 
Sbjct: 137 VQVAQVACGYWHSLALSKGGHIFSWGQNRYGQLGLGMTGQSISVPQHLQSLQGIPFAQIA 196

Query: 382 ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYH 441
           A    +F L  +G+V+G+G   FG LG  D   +D+   P +L +LR+  V  IS G  H
Sbjct: 197 AGGAHSFALTLSGAVFGWGRNKFGQLGLND--TNDRCF-PALLKALRSQRVIYISCGEDH 253

Query: 442 TVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF 477
           T  +T  G +F FG     QLGH++    + P ++F
Sbjct: 254 TAALTKEGGVFTFGAGGYGQLGHNSTNHEVNPRKVF 289



 Score =  119 bits (299), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 101/333 (30%), Positives = 156/333 (46%), Gaps = 13/333 (3%)

Query: 135 GSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSF 193
           G++  G LG G    + V   R   F     V  V     H AF+L+ G V+TCG N   
Sbjct: 5   GNASYGQLGLGGIDEEIVVEPRKCEFFHGKRVRDVGCGRRHTAFLLEDGTVYTCGCNDLG 64

Query: 194 CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDT 253
             GH  + +   +P  V AL       ++ G + T  L  +G V + G  + GQLG  + 
Sbjct: 65  QLGHEKSRK---KPEQVVALDAQIIVALSCGESHTLALNDKGQVFSWGLGSDGQLGLNNF 121

Query: 254 LD-RPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQ- 311
            +    P++I  L +V  V Q+A G  + LA++  G ++S+G      LG G     +  
Sbjct: 122 EECIRVPRNIKSLSDV-QVAQVACGYWHSLALSKGGHIFSWGQNRYGQLGLGMTGQSISV 180

Query: 312 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSS 371
           P+ +Q+   +GI   +++AG  H  AL  SG V+ WG+   G LG  D  D+  P  L +
Sbjct: 181 PQHLQSL--QGIPFAQIAAGGAHSFALTLSGAVFGWGRNKFGQLGLNDTNDRCFPALLKA 238

Query: 372 LKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHH 431
           L+S   + +   +  T  L   G V+ FG  G+G LG      ++  + PR +  L  + 
Sbjct: 239 LRSQRVIYISCGEDHTAALTKEGGVFTFGAGGYGQLG---HNSTNHEVNPRKVFELMGNV 295

Query: 432 VSQISTGLYHTVVVT-DRGRLFGFGDNERAQLG 463
           V+QI+ G  HT+  T   G++  FG     QLG
Sbjct: 296 VTQIACGRQHTLAFTPSSGKMDSFGLGGNGQLG 328



 Score =  112 bits (279), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 87/293 (29%), Positives = 139/293 (47%), Gaps = 9/293 (3%)

Query: 119 GRYHT-LLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAF 177
           GR HT  L+ + +V++CG +  G LGH     +      ++   A  +V +S  E+H   
Sbjct: 42  GRRHTAFLLEDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQIIVALSCGESHTLA 98

Query: 178 VLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHV 237
           +   GQVF+ G  S    G  +    I  PR +++L  V   QV  G   +  L+  GH+
Sbjct: 99  LNDKGQVFSWGLGSDGQLGLNNFEECIRVPRNIKSLSDVQVAQVACGYWHSLALSKGGHI 158

Query: 238 HTCGSNTHGQLGHGDT-LDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 296
            + G N +GQLG G T      P+ +  L+ +    QIAAG ++  A+T +G V+ +G  
Sbjct: 159 FSWGQNRYGQLGLGMTGQSISVPQHLQSLQGI-PFAQIAAGGAHSFALTLSGAVFGWGRN 217

Query: 297 SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 356
               LG  + +D   P  ++  R +   V+ +S G++H  AL   G V+T+G G  G LG
Sbjct: 218 KFGQLGLNDTNDRCFPALLKALRSQ--RVIYISCGEDHTAALTKEGGVFTFGAGGYGQLG 275

Query: 357 HGDEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLG 408
           H     +  P  +  L  ++  Q+ C R+        +G +  FG  G G LG
Sbjct: 276 HNSTNHEVNPRKVFELMGNVVTQIACGRQHTLAFTPSSGKMDSFGLGGNGQLG 328



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 44/150 (29%), Positives = 65/150 (43%), Gaps = 4/150 (2%)

Query: 115 QITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
           QI  G  H+  ++ S +VF  G +  G LG      +C     +    +  V+ +S  E+
Sbjct: 194 QIAAGGAHSFALTLSGAVFGWGRNKFGQLGLNDTNDRCFP-ALLKALRSQRVIYISCGED 252

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFT-GFLT 232
           H A + + G VFT G       GH  TN  +  PR V  L G    Q+  G   T  F  
Sbjct: 253 HTAALTKEGGVFTFGAGGYGQLGHNSTNHEV-NPRKVFELMGNVVTQIACGRQHTLAFTP 311

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSI 262
             G + + G   +GQLG   T +R +P  +
Sbjct: 312 SSGKMDSFGLGGNGQLGTRSTCNRKSPAPV 341


>gi|148689921|gb|EDL21868.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
            RCC1 (CHC1)-like domain (RLD) 2, isoform CRA_a [Mus
            musculus]
          Length = 4902

 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 96/328 (29%), Positives = 159/328 (48%), Gaps = 16/328 (4%)

Query: 161  SAAHVVQVSASENHAAFVLQSGQVFTCGD--NSSFCCGHRDTNRPIFRPRLVEALKGVPC 218
            SA +VVQV+        V   G+V++CG+  N     G      PI  PR + AL     
Sbjct: 3057 SALNVVQVAGGSKSLFAVTVEGKVYSCGEATNGRLGLGMSSGTVPI--PRQITALSSYVV 3114

Query: 219  KQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA 276
            K+V   +G      LT+ G V + G    G+LGH   ++   P+ I  L+    +  IA 
Sbjct: 3115 KKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALK-TKRIRDIAC 3173

Query: 277  GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEH 334
            G S+  A+T +G +Y++G G    LGHG+   +L+P+ ++     G  V++V+ G  D  
Sbjct: 3174 GSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLL--GHRVIQVACGSRDAQ 3231

Query: 335  VVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 394
             +AL   G V++WG G  G LG G      +P+ +  L      Q+    + +  L  +G
Sbjct: 3232 TLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSG 3291

Query: 395  SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 454
             V+ +G   +  LG    G    V +P++++ LR   +  ++ G  H + VTD G+++ +
Sbjct: 3292 VVWTWGKGDYFRLG---HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAW 3348

Query: 455  GDNERAQLGHDTLRGCLEPTEIFIQEME 482
            GDN+  Q G+ T     +PT   +Q +E
Sbjct: 3349 GDNDHGQQGNGTTTVNRKPT--LVQGLE 3374



 Score =  126 bits (316), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 93/286 (32%), Positives = 141/286 (49%), Gaps = 10/286 (3%)

Query: 183  QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 242
            +VF  G N     G    ++ I  P   E L  +   QV  G      +T+ G V++CG 
Sbjct: 3027 KVFVWGLNDKDQLGGLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYSCGE 3085

Query: 243  NTHGQLGHG-DTLDRPTPKSIAPLEE-VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 300
             T+G+LG G  +   P P+ I  L   V   V + +G  +  A+T +G V+S+G G +  
Sbjct: 3086 ATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGK 3145

Query: 301  LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 360
            LGH  + +  +PR I+  + K I    ++ G  H  AL SSG +YTWG G  G LGHGD 
Sbjct: 3146 LGHFSRMNCDKPRLIEALKTKRIR--DIACGSSHSAALTSSGELYTWGLGEYGRLGHGDN 3203

Query: 361  IDKTLPEPLSSLKSHLAVQVC--ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKV 418
              +  P+ +  L  H  +QV   +R  +T  L D G V+ +G   FG LG   RG S+  
Sbjct: 3204 TTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLG---RGGSEGC 3260

Query: 419  LRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 464
              P+ ++ L    V QI  G   ++ +T  G ++ +G  +  +LGH
Sbjct: 3261 NIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGH 3306



 Score =  121 bits (304), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 85/280 (30%), Positives = 139/280 (49%), Gaps = 9/280 (3%)

Query: 166  VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 225
            V V++   H   +   G+V++ G+      GH + + P  RPR++E+L+G+    V AG 
Sbjct: 4110 VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRS-PCDRPRVIESLRGIEVVDVAAGG 4168

Query: 226  NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA--AGPSYMLA 283
              +  +T  G ++T G   +G+LGH D+ D+  PK +  L+    V+ IA  +G +  L 
Sbjct: 4169 AHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQG-HRVIDIACGSGDAQTLC 4227

Query: 284  VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 343
            +T +  V+S+G G    LG G       P  I +    G+ VV+V  G +  VAL  SG 
Sbjct: 4228 LTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL--TGLGVVKVECGSQFSVALTKSGA 4285

Query: 344  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 403
            VYTWGKG    LGHG +     P  +  L+    + +           + G VY +G   
Sbjct: 4286 VYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDND 4345

Query: 404  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV 443
             G LG    G ++ + RPR++ +L+   V++++ G  HT+
Sbjct: 4346 EGQLG---DGTTNAIQRPRLVAALQGKKVNRVACGSAHTL 4382



 Score =  121 bits (303), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 82/269 (30%), Positives = 131/269 (48%), Gaps = 6/269 (2%)

Query: 207  PRLVEALKGVPCKQV--TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP 264
            P L+E+++ V  K+V   +G      L+  G V++ G    G+LGHG+      P+ I  
Sbjct: 4096 PTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIES 4155

Query: 265  LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH 324
            L  +  VV +AAG ++   VT  G +Y++G G    LGH +  D+L+P+ ++  +   + 
Sbjct: 4156 LRGI-EVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVI 4214

Query: 325  VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARK 384
             +   +GD   + L     V++WG G  G LG G      +P  + SL     V+V    
Sbjct: 4215 DIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGS 4274

Query: 385  RKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV 444
            + +  L  +G+VY +G   +  LG    G  D V RPR +  L+   V  I+TG  H V 
Sbjct: 4275 QFSVALTKSGAVYTWGKGDYHRLG---HGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 4331

Query: 445  VTDRGRLFGFGDNERAQLGHDTLRGCLEP 473
             T+ G ++ +GDN+  QLG  T      P
Sbjct: 4332 CTEDGEVYTWGDNDEGQLGDGTTNAIQRP 4360



 Score =  119 bits (297), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 90/311 (28%), Positives = 151/311 (48%), Gaps = 24/311 (7%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V+QV+ +E     + ++G+V+T   NS            +  P+LV+ L      ++ A 
Sbjct: 522 VMQVACAEKRFLILSRNGRVYTQAYNSD-----------MLAPQLVQGLASRNIVKIAAH 570

Query: 225 LNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGS-VVQIAAGPS 279
            +   +L +   G V++ G    G+LGHGDT+    PK I+    ++ G  VV IA G +
Sbjct: 571 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGST 630

Query: 280 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS--AGDEHVVA 337
           Y  A+T  G +Y++G G+   LGHG   DE  P  +     KG+ V+ V+  +GD   +A
Sbjct: 631 YSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGL--KGLKVIDVACGSGDAQTLA 688

Query: 338 LDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVY 397
           +  +G V++WG G  G LG G       P+ +  L+    ++V    + +  L   G VY
Sbjct: 689 VTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVIKVRCGSQFSIALTKDGQVY 748

Query: 398 GFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDN 457
            +G      LG    G  + V  P++L+ L+   V  ++ G  H + +T+   +  +G N
Sbjct: 749 SWGKGDNQRLG---HGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSN 805

Query: 458 ERAQLGHDTLR 468
           ++ Q   DTLR
Sbjct: 806 DQCQ-HFDTLR 815



 Score =  101 bits (252), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 84/265 (31%), Positives = 126/265 (47%), Gaps = 12/265 (4%)

Query: 96   FLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFT 155
             L+S++H    ++  A N   + G++   L S   V+S G +  G LGHG   + C    
Sbjct: 4098 LLESIQHV--FIKKVAVN---SGGKHCLALSSEGEVYSWGEAEDGKLGHG-NRSPCDRPR 4151

Query: 156  RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 215
             I       VV V+A   H+A V  +G ++T G       GH D+   + +P+LVEAL+G
Sbjct: 4152 VIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQL-KPKLVEALQG 4210

Query: 216  VPCKQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
                 +   +G   T  LT    V + G   +G+LG G +     P  I  L  +G VV+
Sbjct: 4211 HRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLG-VVK 4269

Query: 274  IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
            +  G  + +A+T +G VY++G G    LGHG      +PR +Q    +G  V+ ++ G  
Sbjct: 4270 VECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGL--QGKKVIAIATGSL 4327

Query: 334  HVVALDSSGYVYTWGKGYCGALGHG 358
            H V     G VYTWG    G LG G
Sbjct: 4328 HCVCCTEDGEVYTWGDNDEGQLGDG 4352



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 77/247 (31%), Positives = 125/247 (50%), Gaps = 12/247 (4%)

Query: 235  GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
            G ++  G N  GQLG   G  +  PTP +++A L  V    Q+  G   + AVT +G +Y
Sbjct: 4020 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPV----QLIGGEQTLFAVTADGKLY 4075

Query: 292  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 351
            + G G+   LG G       P  +++ +   I  V V++G +H +AL S G VY+WG+  
Sbjct: 4076 ATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAE 4135

Query: 352  CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 411
             G LGHG+      P  + SL+    V V A    +  +   G +Y +G   +G LG  D
Sbjct: 4136 DGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD 4195

Query: 412  RGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG 469
               S+  L+P+++++L+ H V  I+  +G   T+ +TD   ++ +GD +  +LG     G
Sbjct: 4196 ---SEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDG 4252

Query: 470  CLEPTEI 476
            C  P +I
Sbjct: 4253 CKVPMKI 4259



 Score = 99.8 bits (247), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 79/242 (32%), Positives = 114/242 (47%), Gaps = 7/242 (2%)

Query: 119  GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
            GR+ T L  +  VFS G    G LGH      C     I       +  ++   +H+A +
Sbjct: 3123 GRHATALTVDGKVFSWGEGDDGKLGHF-SRMNCDKPRLIEALKTKRIRDIACGSSHSAAL 3181

Query: 179  LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN--FTGFLTIRGH 236
              SG+++T G       GH D N    +P++V+ L G    QV  G     T  LT  G 
Sbjct: 3182 TSSGELYTWGLGEYGRLGHGD-NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 3240

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 296
            V + G    G+LG G +     P++I  L   G V QI  G  + LA+T +GVV+++G G
Sbjct: 3241 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTWGKG 3299

Query: 297  SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 356
              F LGHG      +P+ ++  R  G  +V V+ G  H +A+  SG VY WG    G  G
Sbjct: 3300 DYFRLGHGSDVHVRKPQVVEGLR--GKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQG 3357

Query: 357  HG 358
            +G
Sbjct: 3358 NG 3359



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 79/275 (28%), Positives = 128/275 (46%), Gaps = 23/275 (8%)

Query: 103 SSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHG-------PETTQCVSFT 155
           S +IV+ +A     + G ++  L +   V+S G    G LGHG       P+     S  
Sbjct: 561 SRNIVKIAAH----SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGK 616

Query: 156 RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 215
           +    +  HVV ++    ++A +   G+++T G  +    GH  +      P LV  LKG
Sbjct: 617 Q----AGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAI-PMLVAGLKG 671

Query: 216 VPCKQVTAGLNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
           +    V  G      L +   G V + G   +G+LG G +    TPK I  L+++  V++
Sbjct: 672 LKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL-DVIK 730

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           +  G  + +A+T +G VYS+G G N  LGHG +     P+ ++    +G  V+ V+AG  
Sbjct: 731 VRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGL--QGKKVIDVAAGST 788

Query: 334 HVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEP 368
           H +AL     V++WG        H D +  T PEP
Sbjct: 789 HCLALTEDSEVHSWGSN--DQCQHFDTLRVTKPEP 821



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 66/225 (29%), Positives = 100/225 (44%), Gaps = 8/225 (3%)

Query: 116  ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
            I  G  H+  L S+  +++ G    G LGHG  TTQ +    +       V+QV+     
Sbjct: 3171 IACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQ-LKPKMVKVLLGHRVIQVACGSRD 3229

Query: 175  AA--FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            A    +   G VF+ GD      G R  +     P+ +E L G    Q+  G  F+  LT
Sbjct: 3230 AQTLALTDEGLVFSWGDGDFGKLG-RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALT 3288

Query: 233  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
              G V T G   + +LGHG  +    P+ +  L     +V +A G  + LAVT +G VY+
Sbjct: 3289 KSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRG-KKIVHVAVGALHCLAVTDSGQVYA 3347

Query: 293  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
            +G   +   G+G      +P  +Q    +G  + RV+ G  H VA
Sbjct: 3348 WGDNDHGQQGNGTTTVNRKPTLVQGL--EGQKITRVACGSSHSVA 3390



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 50/167 (29%), Positives = 76/167 (45%), Gaps = 4/167 (2%)

Query: 118  TGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
            +G   TL L  + +V+S G    G LG G  +  C    +I+  +   VV+V      + 
Sbjct: 4220 SGDAQTLCLTDDDTVWSWGDGDYGKLGRG-GSDGCKVPMKIDSLTGLGVVKVECGSQFSV 4278

Query: 177  FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
             + +SG V+T G       GH   +  + RPR V+ L+G     +  G       T  G 
Sbjct: 4279 ALTKSGAVYTWGKGDYHRLGHGSDDH-VRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGE 4337

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
            V+T G N  GQLG G T     P+ +A L+    V ++A G ++ LA
Sbjct: 4338 VYTWGDNDEGQLGDGTTNAIQRPRLVAALQG-KKVNRVACGSAHTLA 4383



 Score = 52.0 bits (123), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 36/147 (24%), Positives = 71/147 (48%), Gaps = 5/147 (3%)

Query: 332  DEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 391
            D+  ++   SG +Y WG  + G LG  +     +P P  +L +   VQ+   ++  F + 
Sbjct: 4010 DDWTLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVT 4069

Query: 392  DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRG 449
              G +Y     G+G+ G    G ++ V  P +L+S++   + +++  +G  H + ++  G
Sbjct: 4070 ADGKLYA---TGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 4126

Query: 450  RLFGFGDNERAQLGHDTLRGCLEPTEI 476
             ++ +G+ E  +LGH     C  P  I
Sbjct: 4127 EVYSWGEAEDGKLGHGNRSPCDRPRVI 4153



 Score = 44.3 bits (103), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 41/139 (29%), Positives = 65/139 (46%), Gaps = 12/139 (8%)

Query: 344  VYTWGKGYCGALG--HGDEID-KTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 400
            V+ WG      LG   G +I   +  E LS+L     VQV    +  F +   G VY  G
Sbjct: 3028 VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALN---VVQVAGGSKSLFAVTVEGKVYSCG 3084

Query: 401  WMGFGSLGFPDRGVSD-KVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDN 457
                G LG    G+S   V  PR + +L ++ V +++  +G  H   +T  G++F +G+ 
Sbjct: 3085 EATNGRLGL---GMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEG 3141

Query: 458  ERAQLGHDTLRGCLEPTEI 476
            +  +LGH +   C +P  I
Sbjct: 3142 DDGKLGHFSRMNCDKPRLI 3160


>gi|3414809|gb|AAC31431.1| rjs [Mus musculus]
          Length = 4836

 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 96/328 (29%), Positives = 159/328 (48%), Gaps = 16/328 (4%)

Query: 161  SAAHVVQVSASENHAAFVLQSGQVFTCGD--NSSFCCGHRDTNRPIFRPRLVEALKGVPC 218
            SA +VVQV+        V   G+V++CG+  N     G      PI  PR + AL     
Sbjct: 2991 SALNVVQVAGGSKSLFAVTVEGKVYSCGEATNGRLGLGMSSGTVPI--PRQITALSSYVV 3048

Query: 219  KQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA 276
            K+V   +G      LT+ G V + G    G+LGH   ++   P+ I  L+    +  IA 
Sbjct: 3049 KKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALK-TKRIRDIAC 3107

Query: 277  GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEH 334
            G S+  A+T +G +Y++G G    LGHG+   +L+P+ ++     G  V++V+ G  D  
Sbjct: 3108 GSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLL--GHRVIQVACGTRDAQ 3165

Query: 335  VVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 394
             +AL   G V++WG G  G LG G      +P+ +  L      Q+    + +  L  +G
Sbjct: 3166 TLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSG 3225

Query: 395  SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 454
             V+ +G   +  LG    G    V +P++++ LR   +  ++ G  H + VTD G+++ +
Sbjct: 3226 VVWTWGKGDYFRLG---HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAW 3282

Query: 455  GDNERAQLGHDTLRGCLEPTEIFIQEME 482
            GDN+  Q G+ T     +PT   +Q +E
Sbjct: 3283 GDNDHGQQGNGTTTVNRKPT--LVQGLE 3308



 Score =  125 bits (315), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 93/286 (32%), Positives = 140/286 (48%), Gaps = 10/286 (3%)

Query: 183  QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 242
            +VF  G N     G    ++ I  P   E L  +   QV  G      +T+ G V++CG 
Sbjct: 2961 KVFVWGLNDKDQLGGLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYSCGE 3019

Query: 243  NTHGQLGHG-DTLDRPTPKSIAPLEE-VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 300
             T+G+LG G  +   P P+ I  L   V   V + +G  +  A+T +G V+S+G G +  
Sbjct: 3020 ATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGK 3079

Query: 301  LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 360
            LGH  + +  +PR I+  + K I    ++ G  H  AL SSG +YTWG G  G LGHGD 
Sbjct: 3080 LGHFSRMNCDKPRLIEALKTKRIR--DIACGSSHSAALTSSGELYTWGLGEYGRLGHGDN 3137

Query: 361  IDKTLPEPLSSLKSHLAVQVC--ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKV 418
              +  P+ +  L  H  +QV    R  +T  L D G V+ +G   FG LG   RG S+  
Sbjct: 3138 TTQLKPKMVKVLLGHRVIQVACGTRDAQTLALTDEGLVFSWGDGDFGKLG---RGGSEGC 3194

Query: 419  LRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 464
              P+ ++ L    V QI  G   ++ +T  G ++ +G  +  +LGH
Sbjct: 3195 NIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGH 3240



 Score =  122 bits (307), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 85/280 (30%), Positives = 139/280 (49%), Gaps = 9/280 (3%)

Query: 166  VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 225
            V V++   H   +   G+V++ G+      GH + + P  RPR++E+L+G+    V AG 
Sbjct: 4044 VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRS-PCDRPRVIESLRGIEVVDVAAGG 4102

Query: 226  NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA--AGPSYMLA 283
              +  +T  G ++T G   +G+LGH D+ D+  PK +  L+    V+ IA  +G +  L 
Sbjct: 4103 AHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQG-HRVIDIACGSGDAQTLC 4161

Query: 284  VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 343
            +T +  V+S+G G    LG G       P  I +    G+ VV+V  G +  VAL  SG 
Sbjct: 4162 LTDDDTVWSWGDGDYGKLGRGGSDGSKVPMKIDSL--TGLGVVKVECGSQFSVALTKSGA 4219

Query: 344  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 403
            VYTWGKG    LGHG +     P  +  L+    + +           + G VY +G   
Sbjct: 4220 VYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDND 4279

Query: 404  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV 443
             G LG    G ++ + RPR++ +L+   V++++ G  HT+
Sbjct: 4280 EGQLG---DGTTNAIQRPRLVAALQGKKVNRVACGSAHTL 4316



 Score =  122 bits (306), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 82/269 (30%), Positives = 131/269 (48%), Gaps = 6/269 (2%)

Query: 207  PRLVEALKGVPCKQV--TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP 264
            P L+E+++ V  K+V   +G      L+  G V++ G    G+LGHG+      P+ I  
Sbjct: 4030 PTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIES 4089

Query: 265  LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH 324
            L  +  VV +AAG ++   VT  G +Y++G G    LGH +  D+L+P+ ++  +   + 
Sbjct: 4090 LRGI-EVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVI 4148

Query: 325  VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARK 384
             +   +GD   + L     V++WG G  G LG G      +P  + SL     V+V    
Sbjct: 4149 DIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGSKVPMKIDSLTGLGVVKVECGS 4208

Query: 385  RKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV 444
            + +  L  +G+VY +G   +  LG    G  D V RPR +  L+   V  I+TG  H V 
Sbjct: 4209 QFSVALTKSGAVYTWGKGDYHRLG---HGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 4265

Query: 445  VTDRGRLFGFGDNERAQLGHDTLRGCLEP 473
             T+ G ++ +GDN+  QLG  T      P
Sbjct: 4266 CTEDGEVYTWGDNDEGQLGDGTTNAIQRP 4294



 Score =  119 bits (299), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 90/311 (28%), Positives = 151/311 (48%), Gaps = 24/311 (7%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V+QV+ +E     + ++G+V+T   NS            +  P+LV+ L      ++ A 
Sbjct: 454 VMQVACAEKRFLILSRNGRVYTQAYNSD-----------MLAPQLVQGLASRNIVKIAAH 502

Query: 225 LNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGS-VVQIAAGPS 279
            +   +L +   G V++ G    G+LGHGDT+    PK I+    ++ G  VV IA G +
Sbjct: 503 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGST 562

Query: 280 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS--AGDEHVVA 337
           Y  A+T  G +Y++G G+   LGHG   DE  P  +     KG+ V+ V+  +GD   +A
Sbjct: 563 YSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGL--KGLKVIDVACGSGDAQTLA 620

Query: 338 LDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVY 397
           +  +G V++WG G  G LG G       P+ +  L+    ++V    + +  L   G VY
Sbjct: 621 VTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVIKVRCGSQFSIALTKDGQVY 680

Query: 398 GFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDN 457
            +G      LG    G  + V  P++L+ L+   V  ++ G  H + +T+   +  +G N
Sbjct: 681 SWGKGDNQRLGL---GTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSN 737

Query: 458 ERAQLGHDTLR 468
           ++ Q   DTLR
Sbjct: 738 DQCQ-HFDTLR 747



 Score =  102 bits (255), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 84/265 (31%), Positives = 126/265 (47%), Gaps = 12/265 (4%)

Query: 96   FLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFT 155
             L+S++H    ++  A N   + G++   L S   V+S G +  G LGHG   + C    
Sbjct: 4032 LLESIQHV--FIKKVAVN---SGGKHCLALSSEGEVYSWGEAEDGKLGHG-NRSPCDRPR 4085

Query: 156  RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 215
             I       VV V+A   H+A V  +G ++T G       GH D+   + +P+LVEAL+G
Sbjct: 4086 VIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQL-KPKLVEALQG 4144

Query: 216  VPCKQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
                 +   +G   T  LT    V + G   +G+LG G +     P  I  L  +G VV+
Sbjct: 4145 HRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGSKVPMKIDSLTGLG-VVK 4203

Query: 274  IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
            +  G  + +A+T +G VY++G G    LGHG      +PR +Q    +G  V+ ++ G  
Sbjct: 4204 VECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGL--QGKKVIAIATGSL 4261

Query: 334  HVVALDSSGYVYTWGKGYCGALGHG 358
            H V     G VYTWG    G LG G
Sbjct: 4262 HCVCCTEDGEVYTWGDNDEGQLGDG 4286



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 79/242 (32%), Positives = 114/242 (47%), Gaps = 7/242 (2%)

Query: 119  GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
            GR+ T L  +  VFS G    G LGH      C     I       +  ++   +H+A +
Sbjct: 3057 GRHATALTVDGKVFSWGEGDDGKLGHF-SRMNCDKPRLIEALKTKRIRDIACGSSHSAAL 3115

Query: 179  LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN--FTGFLTIRGH 236
              SG+++T G       GH D N    +P++V+ L G    QV  G     T  LT  G 
Sbjct: 3116 TSSGELYTWGLGEYGRLGHGD-NTTQLKPKMVKVLLGHRVIQVACGTRDAQTLALTDEGL 3174

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 296
            V + G    G+LG G +     P++I  L   G V QI  G  + LA+T +GVV+++G G
Sbjct: 3175 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTWGKG 3233

Query: 297  SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 356
              F LGHG      +P+ ++  R  G  +V V+ G  H +A+  SG VY WG    G  G
Sbjct: 3234 DYFRLGHGSDVHVRKPQVVEGLR--GKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQG 3291

Query: 357  HG 358
            +G
Sbjct: 3292 NG 3293



 Score = 97.4 bits (241), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 76/247 (30%), Positives = 124/247 (50%), Gaps = 12/247 (4%)

Query: 235  GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
            G ++  G N  GQLG   G  +  PTP +++A L  V    Q+  G   + AVT +G +Y
Sbjct: 3954 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPV----QLIGGEQTLFAVTADGKLY 4009

Query: 292  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 351
            + G G+   LG G       P  +++ +   I  V V++G +H +AL S G VY+WG+  
Sbjct: 4010 ATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAE 4069

Query: 352  CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 411
             G LGHG+      P  + SL+    V V A    +  +   G +Y +G   +G LG  D
Sbjct: 4070 DGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD 4129

Query: 412  RGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG 469
               S+  L+P+++++L+ H V  I+  +G   T+ +TD   ++ +GD +  +LG     G
Sbjct: 4130 ---SEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDG 4186

Query: 470  CLEPTEI 476
               P +I
Sbjct: 4187 SKVPMKI 4193



 Score = 92.8 bits (229), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 78/275 (28%), Positives = 127/275 (46%), Gaps = 23/275 (8%)

Query: 103 SSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHG-------PETTQCVSFT 155
           S +IV+ +A     + G ++  L +   V+S G    G LGHG       P+     S  
Sbjct: 493 SRNIVKIAAH----SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGK 548

Query: 156 RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 215
           +    +  HVV ++    ++A +   G+++T G  +    GH  +      P LV  LKG
Sbjct: 549 Q----AGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAI-PMLVAGLKG 603

Query: 216 VPCKQVTAGLNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
           +    V  G      L +   G V + G   +G+LG G +    TPK I  L+++  V++
Sbjct: 604 LKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL-DVIK 662

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           +  G  + +A+T +G VYS+G G N  LG G +     P+ ++    +G  V+ V+AG  
Sbjct: 663 VRCGSQFSIALTKDGQVYSWGKGDNQRLGLGTEEHVRYPKLLEGL--QGKKVIDVAAGST 720

Query: 334 HVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEP 368
           H +AL     V++WG        H D +  T PEP
Sbjct: 721 HCLALTEDSEVHSWGSN--DQCQHFDTLRVTKPEP 753



 Score = 66.6 bits (161), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 66/225 (29%), Positives = 100/225 (44%), Gaps = 8/225 (3%)

Query: 116  ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
            I  G  H+  L S+  +++ G    G LGHG  TTQ +    +       V+QV+     
Sbjct: 3105 IACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQ-LKPKMVKVLLGHRVIQVACGTRD 3163

Query: 175  AA--FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            A    +   G VF+ GD      G R  +     P+ +E L G    Q+  G  F+  LT
Sbjct: 3164 AQTLALTDEGLVFSWGDGDFGKLG-RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALT 3222

Query: 233  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
              G V T G   + +LGHG  +    P+ +  L     +V +A G  + LAVT +G VY+
Sbjct: 3223 KSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRG-KKIVHVAVGALHCLAVTDSGQVYA 3281

Query: 293  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
            +G   +   G+G      +P  +Q    +G  + RV+ G  H VA
Sbjct: 3282 WGDNDHGQQGNGTTTVNRKPTLVQGL--EGQKITRVACGSSHSVA 3324



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 50/167 (29%), Positives = 75/167 (44%), Gaps = 4/167 (2%)

Query: 118  TGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
            +G   TL L  + +V+S G    G LG G      V   +I+  +   VV+V      + 
Sbjct: 4154 SGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGSKVPM-KIDSLTGLGVVKVECGSQFSV 4212

Query: 177  FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
             + +SG V+T G       GH   +  + RPR V+ L+G     +  G       T  G 
Sbjct: 4213 ALTKSGAVYTWGKGDYHRLGHGSDDH-VRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGE 4271

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
            V+T G N  GQLG G T     P+ +A L+    V ++A G ++ LA
Sbjct: 4272 VYTWGDNDEGQLGDGTTNAIQRPRLVAALQG-KKVNRVACGSAHTLA 4317



 Score = 52.0 bits (123), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 36/147 (24%), Positives = 71/147 (48%), Gaps = 5/147 (3%)

Query: 332  DEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 391
            D+  ++   SG +Y WG  + G LG  +     +P P  +L +   VQ+   ++  F + 
Sbjct: 3944 DDWTLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVT 4003

Query: 392  DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRG 449
              G +Y     G+G+ G    G ++ V  P +L+S++   + +++  +G  H + ++  G
Sbjct: 4004 ADGKLYA---TGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 4060

Query: 450  RLFGFGDNERAQLGHDTLRGCLEPTEI 476
             ++ +G+ E  +LGH     C  P  I
Sbjct: 4061 EVYSWGEAEDGKLGHGNRSPCDRPRVI 4087



 Score = 44.3 bits (103), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 41/139 (29%), Positives = 65/139 (46%), Gaps = 12/139 (8%)

Query: 344  VYTWGKGYCGALG--HGDEID-KTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 400
            V+ WG      LG   G +I   +  E LS+L     VQV    +  F +   G VY  G
Sbjct: 2962 VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALN---VVQVAGGSKSLFAVTVEGKVYSCG 3018

Query: 401  WMGFGSLGFPDRGVSD-KVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDN 457
                G LG    G+S   V  PR + +L ++ V +++  +G  H   +T  G++F +G+ 
Sbjct: 3019 EATNGRLGL---GMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEG 3075

Query: 458  ERAQLGHDTLRGCLEPTEI 476
            +  +LGH +   C +P  I
Sbjct: 3076 DDGKLGHFSRMNCDKPRLI 3094


>gi|148700108|gb|EDL32055.1| hect domain and RLD 4, isoform CRA_e [Mus musculus]
          Length = 928

 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 91/276 (32%), Positives = 142/276 (51%), Gaps = 10/276 (3%)

Query: 204 IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 263
           +  PR  +       + V  GL  T F+   G V+TCG N  GQLGH  +  R  P+ + 
Sbjct: 22  VLEPRRSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKS--RKKPEQVV 79

Query: 264 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLG-HGEQHDELQPRAIQTFRRKG 322
            L+   ++V +A G ++ LA+   G VY++G  S+  LG  G +     PR I++     
Sbjct: 80  ALD-AQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSL--SD 136

Query: 323 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK-TLPEPLSSLKSHLAVQVC 381
           I +V+V+ G  H +AL  +  V+ WG+   G LG G +  K T P+ + SL     +QV 
Sbjct: 137 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCQKQTSPQLIKSLLGIPFMQVA 196

Query: 382 ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYH 441
           A    +FVL  +G+++G+G   FG LG  D   +D+ + P +L SLR+  +  I  G  H
Sbjct: 197 AGGAHSFVLTLSGAIFGWGRNKFGQLGLNDE--NDRYV-PNLLKSLRSQKIVYICCGEDH 253

Query: 442 TVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF 477
           T  +T  G +F FG     QLGH++    + P ++F
Sbjct: 254 TAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVF 289



 Score =  125 bits (315), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 144/311 (46%), Gaps = 12/311 (3%)

Query: 156 RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 215
           R +F     V  V     H  FVL  G V+TCG N     GH  + +   +P  V AL  
Sbjct: 27  RSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRK---KPEQVVALDA 83

Query: 216 VPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLG-HGDTLDRPTPKSIAPLEEVGSVVQI 274
                V  G   T  L  +G V+  G ++ GQLG  G       P++I  L ++  +VQ+
Sbjct: 84  QNIVAVACGEAHTLALNDKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSLSDI-QIVQV 142

Query: 275 AAGPSYMLAVTGNGVVYSFGSGSNFCLGHG-EQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           A G  + LA++    V+ +G      LG G +   +  P+ I++    GI  ++V+AG  
Sbjct: 143 ACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCQKQTSPQLIKSLL--GIPFMQVAAGGA 200

Query: 334 HVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDT 393
           H   L  SG ++ WG+   G LG  DE D+ +P  L SL+S   V +C  +  T  L   
Sbjct: 201 HSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKE 260

Query: 394 GSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHT-VVVTDRGRLF 452
           G V+ FG  G+G LG      +   + PR +  L    V+Q++ G  HT   V   GR++
Sbjct: 261 GGVFTFGAGGYGQLG---HNSTSHEINPRKVFELMGSIVTQVACGRQHTSAFVPSSGRIY 317

Query: 453 GFGDNERAQLG 463
            FG     QLG
Sbjct: 318 SFGLGGNGQLG 328



 Score =  111 bits (277), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 80/291 (27%), Positives = 139/291 (47%), Gaps = 8/291 (2%)

Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 179
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V V+  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVACGEAHTLALN 100

Query: 180 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 239
             GQV+  G +S    G + +   I  PR +++L  +   QV  G   +  L+    V  
Sbjct: 101 DKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFC 160

Query: 240 CGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
            G N +GQLG G D   + +P+ I  L  +   +Q+AAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKYGQLGLGIDCQKQTSPQLIKSLLGI-PFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 299 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 358
             LG  +++D   P  +++ R + I  V +  G++H  AL   G V+T+G G  G LGH 
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRSQKI--VYICCGEDHTAALTKEGGVFTFGAGGYGQLGHN 277

Query: 359 DEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLG 408
               +  P  +  L   +  QV C R+  +  +  +G +Y FG  G G LG
Sbjct: 278 STSHEINPRKVFELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  102 bits (253), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 85/274 (31%), Positives = 131/274 (47%), Gaps = 10/274 (3%)

Query: 98  QSVEHSSDIVETSAGNM-QITTGRYHTLLISNS-SVFSCGSSLCGVLG-HGPETTQCVSF 154
           +S +    +V   A N+  +  G  HTL +++   V++ G    G LG  G E  +C+  
Sbjct: 70  KSRKKPEQVVALDAQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQLGLQGSE--ECIRV 127

Query: 155 TR-INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEAL 213
            R I   S   +VQV+    H+  + ++ +VF  G N     G     +    P+L+++L
Sbjct: 128 PRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCQKQTSPQLIKSL 187

Query: 214 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
            G+P  QV AG   +  LT+ G +   G N  GQLG  D  DR  P  +  L     +V 
Sbjct: 188 LGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRS-QKIVY 246

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           I  G  +  A+T  G V++FG+G    LGH     E+ PR +  F   G  V +V+ G +
Sbjct: 247 ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQVACGRQ 304

Query: 334 HVVA-LDSSGYVYTWGKGYCGALGHGDEIDKTLP 366
           H  A + SSG +Y++G G  G LG G   ++  P
Sbjct: 305 HTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338



 Score = 79.7 bits (195), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 66/206 (32%), Positives = 99/206 (48%), Gaps = 6/206 (2%)

Query: 114 MQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +Q+  G YH+L +S +S VF  G +  G LG G +  +  S   I        +QV+A  
Sbjct: 140 VQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCQKQTSPQLIKSLLGIPFMQVAAGG 199

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            H+  +  SG +F  G N     G  D N   + P L+++L+      +  G + T  LT
Sbjct: 200 AHSFVLTLSGAIFGWGRNKFGQLGLNDENDR-YVPNLLKSLRSQKIVYICCGEDHTAALT 258

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVV 290
             G V T G+  +GQLGH  T     P+ +   E +GS+V Q+A G  +  A V  +G +
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQVACGRQHTSAFVPSSGRI 316

Query: 291 YSFGSGSNFCLGHGEQHDELQPRAIQ 316
           YSFG G N  LG G   +   P  ++
Sbjct: 317 YSFGLGGNGQLGTGSTSNRKSPFTVK 342


>gi|148689922|gb|EDL21869.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
            RCC1 (CHC1)-like domain (RLD) 2, isoform CRA_b [Mus
            musculus]
          Length = 4841

 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 96/328 (29%), Positives = 159/328 (48%), Gaps = 16/328 (4%)

Query: 161  SAAHVVQVSASENHAAFVLQSGQVFTCGD--NSSFCCGHRDTNRPIFRPRLVEALKGVPC 218
            SA +VVQV+        V   G+V++CG+  N     G      PI  PR + AL     
Sbjct: 2996 SALNVVQVAGGSKSLFAVTVEGKVYSCGEATNGRLGLGMSSGTVPI--PRQITALSSYVV 3053

Query: 219  KQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA 276
            K+V   +G      LT+ G V + G    G+LGH   ++   P+ I  L+    +  IA 
Sbjct: 3054 KKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALK-TKRIRDIAC 3112

Query: 277  GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEH 334
            G S+  A+T +G +Y++G G    LGHG+   +L+P+ ++     G  V++V+ G  D  
Sbjct: 3113 GSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLL--GHRVIQVACGSRDAQ 3170

Query: 335  VVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 394
             +AL   G V++WG G  G LG G      +P+ +  L      Q+    + +  L  +G
Sbjct: 3171 TLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSG 3230

Query: 395  SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 454
             V+ +G   +  LG    G    V +P++++ LR   +  ++ G  H + VTD G+++ +
Sbjct: 3231 VVWTWGKGDYFRLG---HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAW 3287

Query: 455  GDNERAQLGHDTLRGCLEPTEIFIQEME 482
            GDN+  Q G+ T     +PT   +Q +E
Sbjct: 3288 GDNDHGQQGNGTTTVNRKPT--LVQGLE 3313



 Score =  126 bits (316), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 93/286 (32%), Positives = 141/286 (49%), Gaps = 10/286 (3%)

Query: 183  QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 242
            +VF  G N     G    ++ I  P   E L  +   QV  G      +T+ G V++CG 
Sbjct: 2966 KVFVWGLNDKDQLGGLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYSCGE 3024

Query: 243  NTHGQLGHG-DTLDRPTPKSIAPLEE-VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 300
             T+G+LG G  +   P P+ I  L   V   V + +G  +  A+T +G V+S+G G +  
Sbjct: 3025 ATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGK 3084

Query: 301  LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 360
            LGH  + +  +PR I+  + K I    ++ G  H  AL SSG +YTWG G  G LGHGD 
Sbjct: 3085 LGHFSRMNCDKPRLIEALKTKRIR--DIACGSSHSAALTSSGELYTWGLGEYGRLGHGDN 3142

Query: 361  IDKTLPEPLSSLKSHLAVQVC--ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKV 418
              +  P+ +  L  H  +QV   +R  +T  L D G V+ +G   FG LG   RG S+  
Sbjct: 3143 TTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLG---RGGSEGC 3199

Query: 419  LRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 464
              P+ ++ L    V QI  G   ++ +T  G ++ +G  +  +LGH
Sbjct: 3200 NIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGH 3245



 Score =  121 bits (304), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 85/280 (30%), Positives = 139/280 (49%), Gaps = 9/280 (3%)

Query: 166  VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 225
            V V++   H   +   G+V++ G+      GH + + P  RPR++E+L+G+    V AG 
Sbjct: 4049 VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRS-PCDRPRVIESLRGIEVVDVAAGG 4107

Query: 226  NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA--AGPSYMLA 283
              +  +T  G ++T G   +G+LGH D+ D+  PK +  L+    V+ IA  +G +  L 
Sbjct: 4108 AHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQG-HRVIDIACGSGDAQTLC 4166

Query: 284  VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 343
            +T +  V+S+G G    LG G       P  I +    G+ VV+V  G +  VAL  SG 
Sbjct: 4167 LTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL--TGLGVVKVECGSQFSVALTKSGA 4224

Query: 344  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 403
            VYTWGKG    LGHG +     P  +  L+    + +           + G VY +G   
Sbjct: 4225 VYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDND 4284

Query: 404  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV 443
             G LG    G ++ + RPR++ +L+   V++++ G  HT+
Sbjct: 4285 EGQLG---DGTTNAIQRPRLVAALQGKKVNRVACGSAHTL 4321



 Score =  121 bits (303), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 82/269 (30%), Positives = 131/269 (48%), Gaps = 6/269 (2%)

Query: 207  PRLVEALKGVPCKQV--TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP 264
            P L+E+++ V  K+V   +G      L+  G V++ G    G+LGHG+      P+ I  
Sbjct: 4035 PTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIES 4094

Query: 265  LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH 324
            L  +  VV +AAG ++   VT  G +Y++G G    LGH +  D+L+P+ ++  +   + 
Sbjct: 4095 LRGI-EVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVI 4153

Query: 325  VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARK 384
             +   +GD   + L     V++WG G  G LG G      +P  + SL     V+V    
Sbjct: 4154 DIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGS 4213

Query: 385  RKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV 444
            + +  L  +G+VY +G   +  LG    G  D V RPR +  L+   V  I+TG  H V 
Sbjct: 4214 QFSVALTKSGAVYTWGKGDYHRLG---HGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 4270

Query: 445  VTDRGRLFGFGDNERAQLGHDTLRGCLEP 473
             T+ G ++ +GDN+  QLG  T      P
Sbjct: 4271 CTEDGEVYTWGDNDEGQLGDGTTNAIQRP 4299



 Score =  118 bits (296), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 90/311 (28%), Positives = 151/311 (48%), Gaps = 24/311 (7%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V+QV+ +E     + ++G+V+T   NS            +  P+LV+ L      ++ A 
Sbjct: 459 VMQVACAEKRFLILSRNGRVYTQAYNSD-----------MLAPQLVQGLASRNIVKIAAH 507

Query: 225 LNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGS-VVQIAAGPS 279
            +   +L +   G V++ G    G+LGHGDT+    PK I+    ++ G  VV IA G +
Sbjct: 508 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGST 567

Query: 280 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS--AGDEHVVA 337
           Y  A+T  G +Y++G G+   LGHG   DE  P  +     KG+ V+ V+  +GD   +A
Sbjct: 568 YSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGL--KGLKVIDVACGSGDAQTLA 625

Query: 338 LDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVY 397
           +  +G V++WG G  G LG G       P+ +  L+    ++V    + +  L   G VY
Sbjct: 626 VTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVIKVRCGSQFSIALTKDGQVY 685

Query: 398 GFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDN 457
            +G      LG    G  + V  P++L+ L+   V  ++ G  H + +T+   +  +G N
Sbjct: 686 SWGKGDNQRLG---HGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSN 742

Query: 458 ERAQLGHDTLR 468
           ++ Q   DTLR
Sbjct: 743 DQCQ-HFDTLR 752



 Score =  102 bits (253), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 84/265 (31%), Positives = 126/265 (47%), Gaps = 12/265 (4%)

Query: 96   FLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFT 155
             L+S++H    ++  A N   + G++   L S   V+S G +  G LGHG   + C    
Sbjct: 4037 LLESIQHV--FIKKVAVN---SGGKHCLALSSEGEVYSWGEAEDGKLGHG-NRSPCDRPR 4090

Query: 156  RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 215
             I       VV V+A   H+A V  +G ++T G       GH D+   + +P+LVEAL+G
Sbjct: 4091 VIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQL-KPKLVEALQG 4149

Query: 216  VPCKQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
                 +   +G   T  LT    V + G   +G+LG G +     P  I  L  +G VV+
Sbjct: 4150 HRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLG-VVK 4208

Query: 274  IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
            +  G  + +A+T +G VY++G G    LGHG      +PR +Q    +G  V+ ++ G  
Sbjct: 4209 VECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGL--QGKKVIAIATGSL 4266

Query: 334  HVVALDSSGYVYTWGKGYCGALGHG 358
            H V     G VYTWG    G LG G
Sbjct: 4267 HCVCCTEDGEVYTWGDNDEGQLGDG 4291



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 77/247 (31%), Positives = 125/247 (50%), Gaps = 12/247 (4%)

Query: 235  GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
            G ++  G N  GQLG   G  +  PTP +++A L  V    Q+  G   + AVT +G +Y
Sbjct: 3959 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPV----QLIGGEQTLFAVTADGKLY 4014

Query: 292  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 351
            + G G+   LG G       P  +++ +   I  V V++G +H +AL S G VY+WG+  
Sbjct: 4015 ATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAE 4074

Query: 352  CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 411
             G LGHG+      P  + SL+    V V A    +  +   G +Y +G   +G LG  D
Sbjct: 4075 DGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD 4134

Query: 412  RGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG 469
               S+  L+P+++++L+ H V  I+  +G   T+ +TD   ++ +GD +  +LG     G
Sbjct: 4135 ---SEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDG 4191

Query: 470  CLEPTEI 476
            C  P +I
Sbjct: 4192 CKVPMKI 4198



 Score = 99.8 bits (247), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 79/242 (32%), Positives = 114/242 (47%), Gaps = 7/242 (2%)

Query: 119  GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
            GR+ T L  +  VFS G    G LGH      C     I       +  ++   +H+A +
Sbjct: 3062 GRHATALTVDGKVFSWGEGDDGKLGHF-SRMNCDKPRLIEALKTKRIRDIACGSSHSAAL 3120

Query: 179  LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN--FTGFLTIRGH 236
              SG+++T G       GH D N    +P++V+ L G    QV  G     T  LT  G 
Sbjct: 3121 TSSGELYTWGLGEYGRLGHGD-NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 3179

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 296
            V + G    G+LG G +     P++I  L   G V QI  G  + LA+T +GVV+++G G
Sbjct: 3180 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTWGKG 3238

Query: 297  SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 356
              F LGHG      +P+ ++  R  G  +V V+ G  H +A+  SG VY WG    G  G
Sbjct: 3239 DYFRLGHGSDVHVRKPQVVEGLR--GKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQG 3296

Query: 357  HG 358
            +G
Sbjct: 3297 NG 3298



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 79/275 (28%), Positives = 128/275 (46%), Gaps = 23/275 (8%)

Query: 103 SSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHG-------PETTQCVSFT 155
           S +IV+ +A     + G ++  L +   V+S G    G LGHG       P+     S  
Sbjct: 498 SRNIVKIAAH----SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGK 553

Query: 156 RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 215
           +    +  HVV ++    ++A +   G+++T G  +    GH  +      P LV  LKG
Sbjct: 554 Q----AGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAI-PMLVAGLKG 608

Query: 216 VPCKQVTAGLNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
           +    V  G      L +   G V + G   +G+LG G +    TPK I  L+++  V++
Sbjct: 609 LKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL-DVIK 667

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           +  G  + +A+T +G VYS+G G N  LGHG +     P+ ++    +G  V+ V+AG  
Sbjct: 668 VRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGL--QGKKVIDVAAGST 725

Query: 334 HVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEP 368
           H +AL     V++WG        H D +  T PEP
Sbjct: 726 HCLALTEDSEVHSWGSN--DQCQHFDTLRVTKPEP 758



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 66/225 (29%), Positives = 100/225 (44%), Gaps = 8/225 (3%)

Query: 116  ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
            I  G  H+  L S+  +++ G    G LGHG  TTQ +    +       V+QV+     
Sbjct: 3110 IACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQ-LKPKMVKVLLGHRVIQVACGSRD 3168

Query: 175  AA--FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            A    +   G VF+ GD      G R  +     P+ +E L G    Q+  G  F+  LT
Sbjct: 3169 AQTLALTDEGLVFSWGDGDFGKLG-RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALT 3227

Query: 233  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
              G V T G   + +LGHG  +    P+ +  L     +V +A G  + LAVT +G VY+
Sbjct: 3228 KSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRG-KKIVHVAVGALHCLAVTDSGQVYA 3286

Query: 293  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
            +G   +   G+G      +P  +Q    +G  + RV+ G  H VA
Sbjct: 3287 WGDNDHGQQGNGTTTVNRKPTLVQGL--EGQKITRVACGSSHSVA 3329



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 50/167 (29%), Positives = 76/167 (45%), Gaps = 4/167 (2%)

Query: 118  TGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
            +G   TL L  + +V+S G    G LG G  +  C    +I+  +   VV+V      + 
Sbjct: 4159 SGDAQTLCLTDDDTVWSWGDGDYGKLGRG-GSDGCKVPMKIDSLTGLGVVKVECGSQFSV 4217

Query: 177  FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
             + +SG V+T G       GH   +  + RPR V+ L+G     +  G       T  G 
Sbjct: 4218 ALTKSGAVYTWGKGDYHRLGHGSDDH-VRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGE 4276

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
            V+T G N  GQLG G T     P+ +A L+    V ++A G ++ LA
Sbjct: 4277 VYTWGDNDEGQLGDGTTNAIQRPRLVAALQG-KKVNRVACGSAHTLA 4322



 Score = 52.0 bits (123), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 36/147 (24%), Positives = 71/147 (48%), Gaps = 5/147 (3%)

Query: 332  DEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 391
            D+  ++   SG +Y WG  + G LG  +     +P P  +L +   VQ+   ++  F + 
Sbjct: 3949 DDWTLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVT 4008

Query: 392  DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRG 449
              G +Y     G+G+ G    G ++ V  P +L+S++   + +++  +G  H + ++  G
Sbjct: 4009 ADGKLYA---TGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 4065

Query: 450  RLFGFGDNERAQLGHDTLRGCLEPTEI 476
             ++ +G+ E  +LGH     C  P  I
Sbjct: 4066 EVYSWGEAEDGKLGHGNRSPCDRPRVI 4092



 Score = 44.3 bits (103), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 41/139 (29%), Positives = 65/139 (46%), Gaps = 12/139 (8%)

Query: 344  VYTWGKGYCGALG--HGDEID-KTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 400
            V+ WG      LG   G +I   +  E LS+L     VQV    +  F +   G VY  G
Sbjct: 2967 VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALN---VVQVAGGSKSLFAVTVEGKVYSCG 3023

Query: 401  WMGFGSLGFPDRGVSD-KVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDN 457
                G LG    G+S   V  PR + +L ++ V +++  +G  H   +T  G++F +G+ 
Sbjct: 3024 EATNGRLGL---GMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEG 3080

Query: 458  ERAQLGHDTLRGCLEPTEI 476
            +  +LGH +   C +P  I
Sbjct: 3081 DDGKLGHFSRMNCDKPRLI 3099


>gi|157821067|ref|NP_001100990.1| E3 ubiquitin-protein ligase HERC2 [Rattus norvegicus]
 gi|149031474|gb|EDL86454.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
            RCC1 (CHC1)-like domain (RLD) 2 (predicted) [Rattus
            norvegicus]
          Length = 4779

 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 96/328 (29%), Positives = 159/328 (48%), Gaps = 16/328 (4%)

Query: 161  SAAHVVQVSASENHAAFVLQSGQVFTCGD--NSSFCCGHRDTNRPIFRPRLVEALKGVPC 218
            SA +VVQV+        V   G+V++CG+  N     G      PI  PR + AL     
Sbjct: 2934 SALNVVQVAGGSKSLFAVTVEGKVYSCGEATNGRLGLGMSSGTVPI--PRQITALSSYVV 2991

Query: 219  KQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA 276
            K+V   +G      LT+ G V + G    G+LGH   ++   P+ I  L+    +  IA 
Sbjct: 2992 KKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALK-TKRIRDIAC 3050

Query: 277  GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEH 334
            G S+  A+T +G +Y++G G    LGHG+   +L+P+ ++     G  V++V+ G  D  
Sbjct: 3051 GSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLL--GHRVIQVACGSRDAQ 3108

Query: 335  VVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 394
             +AL   G V++WG G  G LG G      +P+ +  L      Q+    + +  L  +G
Sbjct: 3109 TLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSG 3168

Query: 395  SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 454
             V+ +G   +  LG    G    V +P++++ LR   +  ++ G  H + VTD G+++ +
Sbjct: 3169 VVWTWGKGDYFRLG---HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAW 3225

Query: 455  GDNERAQLGHDTLRGCLEPTEIFIQEME 482
            GDN+  Q G+ T     +PT   +Q +E
Sbjct: 3226 GDNDHGQQGNGTTTVNRKPT--LVQGLE 3251



 Score =  126 bits (316), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 93/286 (32%), Positives = 141/286 (49%), Gaps = 10/286 (3%)

Query: 183  QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 242
            +VF  G N     G    ++ I  P   E L  +   QV  G      +T+ G V++CG 
Sbjct: 2904 KVFVWGLNDKDQLGGLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYSCGE 2962

Query: 243  NTHGQLGHG-DTLDRPTPKSIAPLEE-VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 300
             T+G+LG G  +   P P+ I  L   V   V + +G  +  A+T +G V+S+G G +  
Sbjct: 2963 ATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGK 3022

Query: 301  LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 360
            LGH  + +  +PR I+  + K I    ++ G  H  AL SSG +YTWG G  G LGHGD 
Sbjct: 3023 LGHFSRMNCDKPRLIEALKTKRIR--DIACGSSHSAALTSSGELYTWGLGEYGRLGHGDN 3080

Query: 361  IDKTLPEPLSSLKSHLAVQVC--ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKV 418
              +  P+ +  L  H  +QV   +R  +T  L D G V+ +G   FG LG   RG S+  
Sbjct: 3081 TTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLG---RGGSEGC 3137

Query: 419  LRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 464
              P+ ++ L    V QI  G   ++ +T  G ++ +G  +  +LGH
Sbjct: 3138 NIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGH 3183



 Score =  121 bits (304), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 85/280 (30%), Positives = 139/280 (49%), Gaps = 9/280 (3%)

Query: 166  VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 225
            V V++   H   +   G+V++ G+      GH + + P  RPR++E+L+G+    V AG 
Sbjct: 3987 VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRS-PCDRPRVIESLRGIEVVDVAAGG 4045

Query: 226  NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA--AGPSYMLA 283
              +  +T  G ++T G   +G+LGH D+ D+  PK +  L+    V+ IA  +G +  L 
Sbjct: 4046 AHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQG-HRVIDIACGSGDAQTLC 4104

Query: 284  VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 343
            +T +  V+S+G G    LG G       P  I +    G+ VV+V  G +  VAL  SG 
Sbjct: 4105 LTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL--TGLGVVKVECGSQFSVALTKSGA 4162

Query: 344  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 403
            VYTWGKG    LGHG +     P  +  L+    + +           + G VY +G   
Sbjct: 4163 VYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDND 4222

Query: 404  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV 443
             G LG    G ++ + RPR++ +L+   V++++ G  HT+
Sbjct: 4223 EGQLG---DGTTNAIQRPRLVAALQGKKVNRVACGSAHTL 4259



 Score =  121 bits (303), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 82/269 (30%), Positives = 131/269 (48%), Gaps = 6/269 (2%)

Query: 207  PRLVEALKGVPCKQV--TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP 264
            P L+E+++ V  K+V   +G      L+  G V++ G    G+LGHG+      P+ I  
Sbjct: 3973 PTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIES 4032

Query: 265  LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH 324
            L  +  VV +AAG ++   VT  G +Y++G G    LGH +  D+L+P+ ++  +   + 
Sbjct: 4033 LRGI-EVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVI 4091

Query: 325  VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARK 384
             +   +GD   + L     V++WG G  G LG G      +P  + SL     V+V    
Sbjct: 4092 DIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGS 4151

Query: 385  RKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV 444
            + +  L  +G+VY +G   +  LG    G  D V RPR +  L+   V  I+TG  H V 
Sbjct: 4152 QFSVALTKSGAVYTWGKGDYHRLG---HGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 4208

Query: 445  VTDRGRLFGFGDNERAQLGHDTLRGCLEP 473
             T+ G ++ +GDN+  QLG  T      P
Sbjct: 4209 CTEDGEVYTWGDNDEGQLGDGTTNAIQRP 4237



 Score =  119 bits (297), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 90/311 (28%), Positives = 151/311 (48%), Gaps = 24/311 (7%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V+QV+ +E     + ++G+V+T   NS            +  P+LV+ L      ++ A 
Sbjct: 399 VMQVACAEKRFLILSRNGRVYTQAYNSD-----------MLAPQLVQGLASRNIVKIAAH 447

Query: 225 LNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGS-VVQIAAGPS 279
            +   +L +   G V++ G    G+LGHGDT+    PK I+    ++ G  VV IA G +
Sbjct: 448 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGST 507

Query: 280 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS--AGDEHVVA 337
           Y  A+T  G +Y++G G+   LGHG   DE  P  +     KG+ V+ V+  +GD   +A
Sbjct: 508 YSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGL--KGLKVIDVACGSGDAQTLA 565

Query: 338 LDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVY 397
           +  +G V++WG G  G LG G       P+ +  L+    ++V    + +  L   G VY
Sbjct: 566 VTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVIKVRCGSQFSIALTKDGQVY 625

Query: 398 GFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDN 457
            +G      LG    G  + V  P++L+ L+   V  ++ G  H + +T+   +  +G N
Sbjct: 626 SWGKGDNQRLG---HGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSN 682

Query: 458 ERAQLGHDTLR 468
           ++ Q   DTLR
Sbjct: 683 DQCQ-HFDTLR 692



 Score =  101 bits (252), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 84/265 (31%), Positives = 126/265 (47%), Gaps = 12/265 (4%)

Query: 96   FLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFT 155
             L+S++H    ++  A N   + G++   L S   V+S G +  G LGHG   + C    
Sbjct: 3975 LLESIQHV--FIKKVAVN---SGGKHCLALSSEGEVYSWGEAEDGKLGHG-NRSPCDRPR 4028

Query: 156  RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 215
             I       VV V+A   H+A V  +G ++T G       GH D+   + +P+LVEAL+G
Sbjct: 4029 VIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQL-KPKLVEALQG 4087

Query: 216  VPCKQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
                 +   +G   T  LT    V + G   +G+LG G +     P  I  L  +G VV+
Sbjct: 4088 HRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLG-VVK 4146

Query: 274  IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
            +  G  + +A+T +G VY++G G    LGHG      +PR +Q    +G  V+ ++ G  
Sbjct: 4147 VECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGL--QGKKVIAIATGSL 4204

Query: 334  HVVALDSSGYVYTWGKGYCGALGHG 358
            H V     G VYTWG    G LG G
Sbjct: 4205 HCVCCTEDGEVYTWGDNDEGQLGDG 4229



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 77/247 (31%), Positives = 125/247 (50%), Gaps = 12/247 (4%)

Query: 235  GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
            G ++  G N  GQLG   G  +  PTP +++A L  V    Q+  G   + AVT +G +Y
Sbjct: 3897 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPV----QLIGGEQTLFAVTADGKLY 3952

Query: 292  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 351
            + G G+   LG G       P  +++ +   I  V V++G +H +AL S G VY+WG+  
Sbjct: 3953 ATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAE 4012

Query: 352  CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 411
             G LGHG+      P  + SL+    V V A    +  +   G +Y +G   +G LG  D
Sbjct: 4013 DGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD 4072

Query: 412  RGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG 469
               S+  L+P+++++L+ H V  I+  +G   T+ +TD   ++ +GD +  +LG     G
Sbjct: 4073 ---SEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDG 4129

Query: 470  CLEPTEI 476
            C  P +I
Sbjct: 4130 CKVPMKI 4136



 Score = 99.8 bits (247), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 79/242 (32%), Positives = 114/242 (47%), Gaps = 7/242 (2%)

Query: 119  GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
            GR+ T L  +  VFS G    G LGH      C     I       +  ++   +H+A +
Sbjct: 3000 GRHATALTVDGKVFSWGEGDDGKLGHF-SRMNCDKPRLIEALKTKRIRDIACGSSHSAAL 3058

Query: 179  LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN--FTGFLTIRGH 236
              SG+++T G       GH D N    +P++V+ L G    QV  G     T  LT  G 
Sbjct: 3059 TSSGELYTWGLGEYGRLGHGD-NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 3117

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 296
            V + G    G+LG G +     P++I  L   G V QI  G  + LA+T +GVV+++G G
Sbjct: 3118 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTWGKG 3176

Query: 297  SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 356
              F LGHG      +P+ ++  R  G  +V V+ G  H +A+  SG VY WG    G  G
Sbjct: 3177 DYFRLGHGSDVHVRKPQVVEGLR--GKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQG 3234

Query: 357  HG 358
            +G
Sbjct: 3235 NG 3236



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 79/275 (28%), Positives = 128/275 (46%), Gaps = 23/275 (8%)

Query: 103 SSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHG-------PETTQCVSFT 155
           S +IV+ +A     + G ++  L +   V+S G    G LGHG       P+     S  
Sbjct: 438 SRNIVKIAAH----SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGK 493

Query: 156 RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 215
           +    +  HVV ++    ++A +   G+++T G  +    GH  +      P LV  LKG
Sbjct: 494 Q----AGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAI-PMLVAGLKG 548

Query: 216 VPCKQVTAGLNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
           +    V  G      L +   G V + G   +G+LG G +    TPK I  L+++  V++
Sbjct: 549 LKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL-DVIK 607

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           +  G  + +A+T +G VYS+G G N  LGHG +     P+ ++    +G  V+ V+AG  
Sbjct: 608 VRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGL--QGKKVIDVAAGST 665

Query: 334 HVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEP 368
           H +AL     V++WG        H D +  T PEP
Sbjct: 666 HCLALTEDSEVHSWGSN--DQCQHFDTLRVTKPEP 698



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 66/225 (29%), Positives = 100/225 (44%), Gaps = 8/225 (3%)

Query: 116  ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
            I  G  H+  L S+  +++ G    G LGHG  TTQ +    +       V+QV+     
Sbjct: 3048 IACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQ-LKPKMVKVLLGHRVIQVACGSRD 3106

Query: 175  AA--FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            A    +   G VF+ GD      G R  +     P+ +E L G    Q+  G  F+  LT
Sbjct: 3107 AQTLALTDEGLVFSWGDGDFGKLG-RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALT 3165

Query: 233  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
              G V T G   + +LGHG  +    P+ +  L     +V +A G  + LAVT +G VY+
Sbjct: 3166 KSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRG-KKIVHVAVGALHCLAVTDSGQVYA 3224

Query: 293  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
            +G   +   G+G      +P  +Q    +G  + RV+ G  H VA
Sbjct: 3225 WGDNDHGQQGNGTTTVNRKPTLVQGL--EGQKITRVACGSSHSVA 3267



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 50/167 (29%), Positives = 76/167 (45%), Gaps = 4/167 (2%)

Query: 118  TGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
            +G   TL L  + +V+S G    G LG G  +  C    +I+  +   VV+V      + 
Sbjct: 4097 SGDAQTLCLTDDDTVWSWGDGDYGKLGRG-GSDGCKVPMKIDSLTGLGVVKVECGSQFSV 4155

Query: 177  FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
             + +SG V+T G       GH   +  + RPR V+ L+G     +  G       T  G 
Sbjct: 4156 ALTKSGAVYTWGKGDYHRLGHGSDDH-VRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGE 4214

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
            V+T G N  GQLG G T     P+ +A L+    V ++A G ++ LA
Sbjct: 4215 VYTWGDNDEGQLGDGTTNAIQRPRLVAALQG-KKVNRVACGSAHTLA 4260



 Score = 52.0 bits (123), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 36/147 (24%), Positives = 71/147 (48%), Gaps = 5/147 (3%)

Query: 332  DEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 391
            D+  ++   SG +Y WG  + G LG  +     +P P  +L +   VQ+   ++  F + 
Sbjct: 3887 DDWTLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVT 3946

Query: 392  DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRG 449
              G +Y     G+G+ G    G ++ V  P +L+S++   + +++  +G  H + ++  G
Sbjct: 3947 ADGKLYA---TGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 4003

Query: 450  RLFGFGDNERAQLGHDTLRGCLEPTEI 476
             ++ +G+ E  +LGH     C  P  I
Sbjct: 4004 EVYSWGEAEDGKLGHGNRSPCDRPRVI 4030



 Score = 44.3 bits (103), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 41/139 (29%), Positives = 65/139 (46%), Gaps = 12/139 (8%)

Query: 344  VYTWGKGYCGALG--HGDEID-KTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 400
            V+ WG      LG   G +I   +  E LS+L     VQV    +  F +   G VY  G
Sbjct: 2905 VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALN---VVQVAGGSKSLFAVTVEGKVYSCG 2961

Query: 401  WMGFGSLGFPDRGVSD-KVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDN 457
                G LG    G+S   V  PR + +L ++ V +++  +G  H   +T  G++F +G+ 
Sbjct: 2962 EATNGRLGL---GMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEG 3018

Query: 458  ERAQLGHDTLRGCLEPTEI 476
            +  +LGH +   C +P  I
Sbjct: 3019 DDGKLGHFSRMNCDKPRLI 3037


>gi|58865718|ref|NP_001012074.1| probable E3 ubiquitin-protein ligase HERC4 [Rattus norvegicus]
 gi|81883244|sp|Q5PQN1.1|HERC4_RAT RecName: Full=Probable E3 ubiquitin-protein ligase HERC4; AltName:
           Full=HECT domain and RCC1-like domain-containing protein
           4
 gi|56269464|gb|AAH87104.1| Hect domain and RLD 4 [Rattus norvegicus]
          Length = 1057

 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 91/276 (32%), Positives = 142/276 (51%), Gaps = 10/276 (3%)

Query: 204 IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 263
           +  PR  +       + V  GL  T F+   G V+TCG N  GQLGH  +  R  P+ + 
Sbjct: 22  VLEPRKSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKS--RKKPEQVV 79

Query: 264 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLG-HGEQHDELQPRAIQTFRRKG 322
            L+   ++V ++ G ++ LA+   G VY++G  S+  LG  G +     PR I++     
Sbjct: 80  ALD-AQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSL--SD 136

Query: 323 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK-TLPEPLSSLKSHLAVQVC 381
           I +V+V+ G  H +AL  +  V+ WG+   G LG G E  K T P+ + SL     +QV 
Sbjct: 137 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIECQKQTSPQLIKSLLGIPFMQVA 196

Query: 382 ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYH 441
           A    +FVL  +G+++G+G   FG LG  D   +D+ + P +L SLR+  +  I  G  H
Sbjct: 197 AGGAHSFVLTLSGAIFGWGRNKFGQLGLNDE--NDRYV-PNLLKSLRSQKIVYICCGEDH 253

Query: 442 TVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF 477
           T  +T  G +F FG     QLGH++    + P ++F
Sbjct: 254 TAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVF 289



 Score =  127 bits (319), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 106/333 (31%), Positives = 154/333 (46%), Gaps = 13/333 (3%)

Query: 135 GSSLCGVLGHGPETTQCVSFTRI-NFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSF 193
           G++  G LG G    + V   R  +F     V  V     H  FVL  G V+TCG N   
Sbjct: 5   GNASYGQLGLGGIDEEIVLEPRKSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLG 64

Query: 194 CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLG-HGD 252
             GH  + +   +P  V AL       V+ G   T  L  +G V+  G ++ GQLG  G 
Sbjct: 65  QLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLQGS 121

Query: 253 TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHG-EQHDELQ 311
                 P++I  L ++  +VQ+A G  + LA++    V+ +G      LG G E   +  
Sbjct: 122 EECIRVPRNIKSLSDI-QIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIECQKQTS 180

Query: 312 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSS 371
           P+ I++    GI  ++V+AG  H   L  SG ++ WG+   G LG  DE D+ +P  L S
Sbjct: 181 PQLIKSLL--GIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKS 238

Query: 372 LKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHH 431
           L+S   V +C  +  T  L   G V+ FG  G+G LG      +   + PR +  L    
Sbjct: 239 LRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG---HNSTSHEINPRKVFELMGSI 295

Query: 432 VSQISTGLYHT-VVVTDRGRLFGFGDNERAQLG 463
           V+QI+ G  HT   V   GR++ FG     QLG
Sbjct: 296 VTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 80/291 (27%), Positives = 138/291 (47%), Gaps = 8/291 (2%)

Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 179
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V VS  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVSCGEAHTLALN 100

Query: 180 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 239
             GQV+  G +S    G + +   I  PR +++L  +   QV  G   +  L+    V  
Sbjct: 101 DKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFC 160

Query: 240 CGSNTHGQLGHGDTLDRPT-PKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
            G N +GQLG G    + T P+ I  L  +   +Q+AAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKYGQLGLGIECQKQTSPQLIKSLLGI-PFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 299 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 358
             LG  +++D   P  +++ R + I  V +  G++H  AL   G V+T+G G  G LGH 
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRSQKI--VYICCGEDHTAALTKEGGVFTFGAGGYGQLGHN 277

Query: 359 DEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLG 408
               +  P  +  L   +  Q+ C R+  +  +  +G +Y FG  G G LG
Sbjct: 278 STSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  102 bits (254), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 84/274 (30%), Positives = 132/274 (48%), Gaps = 10/274 (3%)

Query: 98  QSVEHSSDIVETSAGNM-QITTGRYHTLLISNS-SVFSCGSSLCGVLG-HGPETTQCVSF 154
           +S +    +V   A N+  ++ G  HTL +++   V++ G    G LG  G E  +C+  
Sbjct: 70  KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLQGSE--ECIRV 127

Query: 155 TR-INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEAL 213
            R I   S   +VQV+    H+  + ++ +VF  G N     G     +    P+L+++L
Sbjct: 128 PRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIECQKQTSPQLIKSL 187

Query: 214 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
            G+P  QV AG   +  LT+ G +   G N  GQLG  D  DR  P  +  L     +V 
Sbjct: 188 LGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRS-QKIVY 246

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           I  G  +  A+T  G V++FG+G    LGH     E+ PR +  F   G  V +++ G +
Sbjct: 247 ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQ 304

Query: 334 HVVA-LDSSGYVYTWGKGYCGALGHGDEIDKTLP 366
           H  A + SSG +Y++G G  G LG G   ++  P
Sbjct: 305 HTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338



 Score = 81.6 bits (200), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 68/206 (33%), Positives = 99/206 (48%), Gaps = 6/206 (2%)

Query: 114 MQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +Q+  G YH+L +S +S VF  G +  G LG G E  +  S   I        +QV+A  
Sbjct: 140 VQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIECQKQTSPQLIKSLLGIPFMQVAAGG 199

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            H+  +  SG +F  G N     G  D N   + P L+++L+      +  G + T  LT
Sbjct: 200 AHSFVLTLSGAIFGWGRNKFGQLGLNDENDR-YVPNLLKSLRSQKIVYICCGEDHTAALT 258

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVV 290
             G V T G+  +GQLGH  T     P+ +   E +GS+V QIA G  +  A V  +G +
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRI 316

Query: 291 YSFGSGSNFCLGHGEQHDELQPRAIQ 316
           YSFG G N  LG G   +   P  ++
Sbjct: 317 YSFGLGGNGQLGTGSTSNRKSPFTVK 342


>gi|134288898|ref|NP_034548.2| E3 ubiquitin-protein ligase HERC2 [Mus musculus]
 gi|341941077|sp|Q4U2R1.3|HERC2_MOUSE RecName: Full=E3 ubiquitin-protein ligase HERC2; AltName: Full=HECT
            domain and RCC1-like domain-containing protein 2
          Length = 4836

 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 96/328 (29%), Positives = 159/328 (48%), Gaps = 16/328 (4%)

Query: 161  SAAHVVQVSASENHAAFVLQSGQVFTCGD--NSSFCCGHRDTNRPIFRPRLVEALKGVPC 218
            SA +VVQV+        V   G+V++CG+  N     G      PI  PR + AL     
Sbjct: 2991 SALNVVQVAGGSKSLFAVTVEGKVYSCGEATNGRLGLGMSSGTVPI--PRQITALSSYVV 3048

Query: 219  KQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA 276
            K+V   +G      LT+ G V + G    G+LGH   ++   P+ I  L+    +  IA 
Sbjct: 3049 KKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALK-TKRIRDIAC 3107

Query: 277  GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEH 334
            G S+  A+T +G +Y++G G    LGHG+   +L+P+ ++     G  V++V+ G  D  
Sbjct: 3108 GSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLL--GHRVIQVACGSRDAQ 3165

Query: 335  VVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 394
             +AL   G V++WG G  G LG G      +P+ +  L      Q+    + +  L  +G
Sbjct: 3166 TLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSG 3225

Query: 395  SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 454
             V+ +G   +  LG    G    V +P++++ LR   +  ++ G  H + VTD G+++ +
Sbjct: 3226 VVWTWGKGDYFRLG---HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAW 3282

Query: 455  GDNERAQLGHDTLRGCLEPTEIFIQEME 482
            GDN+  Q G+ T     +PT   +Q +E
Sbjct: 3283 GDNDHGQQGNGTTTVNRKPT--LVQGLE 3308



 Score =  126 bits (316), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 93/286 (32%), Positives = 141/286 (49%), Gaps = 10/286 (3%)

Query: 183  QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 242
            +VF  G N     G    ++ I  P   E L  +   QV  G      +T+ G V++CG 
Sbjct: 2961 KVFVWGLNDKDQLGGLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYSCGE 3019

Query: 243  NTHGQLGHG-DTLDRPTPKSIAPLEE-VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 300
             T+G+LG G  +   P P+ I  L   V   V + +G  +  A+T +G V+S+G G +  
Sbjct: 3020 ATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGK 3079

Query: 301  LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 360
            LGH  + +  +PR I+  + K I    ++ G  H  AL SSG +YTWG G  G LGHGD 
Sbjct: 3080 LGHFSRMNCDKPRLIEALKTKRIR--DIACGSSHSAALTSSGELYTWGLGEYGRLGHGDN 3137

Query: 361  IDKTLPEPLSSLKSHLAVQVC--ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKV 418
              +  P+ +  L  H  +QV   +R  +T  L D G V+ +G   FG LG   RG S+  
Sbjct: 3138 TTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLG---RGGSEGC 3194

Query: 419  LRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 464
              P+ ++ L    V QI  G   ++ +T  G ++ +G  +  +LGH
Sbjct: 3195 NIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGH 3240



 Score =  121 bits (304), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 85/280 (30%), Positives = 139/280 (49%), Gaps = 9/280 (3%)

Query: 166  VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 225
            V V++   H   +   G+V++ G+      GH + + P  RPR++E+L+G+    V AG 
Sbjct: 4044 VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRS-PCDRPRVIESLRGIEVVDVAAGG 4102

Query: 226  NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA--AGPSYMLA 283
              +  +T  G ++T G   +G+LGH D+ D+  PK +  L+    V+ IA  +G +  L 
Sbjct: 4103 AHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQG-HRVIDIACGSGDAQTLC 4161

Query: 284  VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 343
            +T +  V+S+G G    LG G       P  I +    G+ VV+V  G +  VAL  SG 
Sbjct: 4162 LTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL--TGLGVVKVECGSQFSVALTKSGA 4219

Query: 344  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 403
            VYTWGKG    LGHG +     P  +  L+    + +           + G VY +G   
Sbjct: 4220 VYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDND 4279

Query: 404  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV 443
             G LG    G ++ + RPR++ +L+   V++++ G  HT+
Sbjct: 4280 EGQLG---DGTTNAIQRPRLVAALQGKKVNRVACGSAHTL 4316



 Score =  121 bits (303), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 82/269 (30%), Positives = 131/269 (48%), Gaps = 6/269 (2%)

Query: 207  PRLVEALKGVPCKQV--TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP 264
            P L+E+++ V  K+V   +G      L+  G V++ G    G+LGHG+      P+ I  
Sbjct: 4030 PTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIES 4089

Query: 265  LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH 324
            L  +  VV +AAG ++   VT  G +Y++G G    LGH +  D+L+P+ ++  +   + 
Sbjct: 4090 LRGI-EVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVI 4148

Query: 325  VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARK 384
             +   +GD   + L     V++WG G  G LG G      +P  + SL     V+V    
Sbjct: 4149 DIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGS 4208

Query: 385  RKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV 444
            + +  L  +G+VY +G   +  LG    G  D V RPR +  L+   V  I+TG  H V 
Sbjct: 4209 QFSVALTKSGAVYTWGKGDYHRLG---HGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 4265

Query: 445  VTDRGRLFGFGDNERAQLGHDTLRGCLEP 473
             T+ G ++ +GDN+  QLG  T      P
Sbjct: 4266 CTEDGEVYTWGDNDEGQLGDGTTNAIQRP 4294



 Score =  119 bits (297), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 90/311 (28%), Positives = 151/311 (48%), Gaps = 24/311 (7%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V+QV+ +E     + ++G+V+T   NS            +  P+LV+ L      ++ A 
Sbjct: 454 VMQVACAEKRFLILSRNGRVYTQAYNSD-----------MLAPQLVQGLASRNIVKIAAH 502

Query: 225 LNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGS-VVQIAAGPS 279
            +   +L +   G V++ G    G+LGHGDT+    PK I+    ++ G  VV IA G +
Sbjct: 503 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGST 562

Query: 280 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS--AGDEHVVA 337
           Y  A+T  G +Y++G G+   LGHG   DE  P  +     KG+ V+ V+  +GD   +A
Sbjct: 563 YSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGL--KGLKVIDVACGSGDAQTLA 620

Query: 338 LDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVY 397
           +  +G V++WG G  G LG G       P+ +  L+    ++V    + +  L   G VY
Sbjct: 621 VTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVIKVRCGSQFSIALTKDGQVY 680

Query: 398 GFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDN 457
            +G      LG    G  + V  P++L+ L+   V  ++ G  H + +T+   +  +G N
Sbjct: 681 SWGKGDNQRLG---HGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSN 737

Query: 458 ERAQLGHDTLR 468
           ++ Q   DTLR
Sbjct: 738 DQCQ-HFDTLR 747



 Score =  101 bits (252), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 84/265 (31%), Positives = 126/265 (47%), Gaps = 12/265 (4%)

Query: 96   FLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFT 155
             L+S++H    ++  A N   + G++   L S   V+S G +  G LGHG   + C    
Sbjct: 4032 LLESIQHV--FIKKVAVN---SGGKHCLALSSEGEVYSWGEAEDGKLGHG-NRSPCDRPR 4085

Query: 156  RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 215
             I       VV V+A   H+A V  +G ++T G       GH D+   + +P+LVEAL+G
Sbjct: 4086 VIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQL-KPKLVEALQG 4144

Query: 216  VPCKQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
                 +   +G   T  LT    V + G   +G+LG G +     P  I  L  +G VV+
Sbjct: 4145 HRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLG-VVK 4203

Query: 274  IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
            +  G  + +A+T +G VY++G G    LGHG      +PR +Q    +G  V+ ++ G  
Sbjct: 4204 VECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGL--QGKKVIAIATGSL 4261

Query: 334  HVVALDSSGYVYTWGKGYCGALGHG 358
            H V     G VYTWG    G LG G
Sbjct: 4262 HCVCCTEDGEVYTWGDNDEGQLGDG 4286



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 77/247 (31%), Positives = 125/247 (50%), Gaps = 12/247 (4%)

Query: 235  GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
            G ++  G N  GQLG   G  +  PTP +++A L  V    Q+  G   + AVT +G +Y
Sbjct: 3954 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPV----QLIGGEQTLFAVTADGKLY 4009

Query: 292  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 351
            + G G+   LG G       P  +++ +   I  V V++G +H +AL S G VY+WG+  
Sbjct: 4010 ATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAE 4069

Query: 352  CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 411
             G LGHG+      P  + SL+    V V A    +  +   G +Y +G   +G LG  D
Sbjct: 4070 DGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD 4129

Query: 412  RGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG 469
               S+  L+P+++++L+ H V  I+  +G   T+ +TD   ++ +GD +  +LG     G
Sbjct: 4130 ---SEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDG 4186

Query: 470  CLEPTEI 476
            C  P +I
Sbjct: 4187 CKVPMKI 4193



 Score = 99.8 bits (247), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 79/242 (32%), Positives = 114/242 (47%), Gaps = 7/242 (2%)

Query: 119  GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
            GR+ T L  +  VFS G    G LGH      C     I       +  ++   +H+A +
Sbjct: 3057 GRHATALTVDGKVFSWGEGDDGKLGHF-SRMNCDKPRLIEALKTKRIRDIACGSSHSAAL 3115

Query: 179  LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN--FTGFLTIRGH 236
              SG+++T G       GH D N    +P++V+ L G    QV  G     T  LT  G 
Sbjct: 3116 TSSGELYTWGLGEYGRLGHGD-NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 3174

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 296
            V + G    G+LG G +     P++I  L   G V QI  G  + LA+T +GVV+++G G
Sbjct: 3175 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTWGKG 3233

Query: 297  SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 356
              F LGHG      +P+ ++  R  G  +V V+ G  H +A+  SG VY WG    G  G
Sbjct: 3234 DYFRLGHGSDVHVRKPQVVEGLR--GKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQG 3291

Query: 357  HG 358
            +G
Sbjct: 3292 NG 3293



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 79/275 (28%), Positives = 128/275 (46%), Gaps = 23/275 (8%)

Query: 103 SSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHG-------PETTQCVSFT 155
           S +IV+ +A     + G ++  L +   V+S G    G LGHG       P+     S  
Sbjct: 493 SRNIVKIAAH----SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGK 548

Query: 156 RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 215
           +    +  HVV ++    ++A +   G+++T G  +    GH  +      P LV  LKG
Sbjct: 549 Q----AGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAI-PMLVAGLKG 603

Query: 216 VPCKQVTAGLNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
           +    V  G      L +   G V + G   +G+LG G +    TPK I  L+++  V++
Sbjct: 604 LKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL-DVIK 662

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           +  G  + +A+T +G VYS+G G N  LGHG +     P+ ++    +G  V+ V+AG  
Sbjct: 663 VRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGL--QGKKVIDVAAGST 720

Query: 334 HVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEP 368
           H +AL     V++WG        H D +  T PEP
Sbjct: 721 HCLALTEDSEVHSWGSN--DQCQHFDTLRVTKPEP 753



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 66/225 (29%), Positives = 100/225 (44%), Gaps = 8/225 (3%)

Query: 116  ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
            I  G  H+  L S+  +++ G    G LGHG  TTQ +    +       V+QV+     
Sbjct: 3105 IACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQ-LKPKMVKVLLGHRVIQVACGSRD 3163

Query: 175  AA--FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            A    +   G VF+ GD      G R  +     P+ +E L G    Q+  G  F+  LT
Sbjct: 3164 AQTLALTDEGLVFSWGDGDFGKLG-RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALT 3222

Query: 233  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
              G V T G   + +LGHG  +    P+ +  L     +V +A G  + LAVT +G VY+
Sbjct: 3223 KSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRG-KKIVHVAVGALHCLAVTDSGQVYA 3281

Query: 293  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
            +G   +   G+G      +P  +Q    +G  + RV+ G  H VA
Sbjct: 3282 WGDNDHGQQGNGTTTVNRKPTLVQGL--EGQKITRVACGSSHSVA 3324



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 50/167 (29%), Positives = 76/167 (45%), Gaps = 4/167 (2%)

Query: 118  TGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
            +G   TL L  + +V+S G    G LG G  +  C    +I+  +   VV+V      + 
Sbjct: 4154 SGDAQTLCLTDDDTVWSWGDGDYGKLGRG-GSDGCKVPMKIDSLTGLGVVKVECGSQFSV 4212

Query: 177  FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
             + +SG V+T G       GH   +  + RPR V+ L+G     +  G       T  G 
Sbjct: 4213 ALTKSGAVYTWGKGDYHRLGHGSDDH-VRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGE 4271

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
            V+T G N  GQLG G T     P+ +A L+    V ++A G ++ LA
Sbjct: 4272 VYTWGDNDEGQLGDGTTNAIQRPRLVAALQG-KKVNRVACGSAHTLA 4317



 Score = 52.0 bits (123), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 36/147 (24%), Positives = 71/147 (48%), Gaps = 5/147 (3%)

Query: 332  DEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 391
            D+  ++   SG +Y WG  + G LG  +     +P P  +L +   VQ+   ++  F + 
Sbjct: 3944 DDWTLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVT 4003

Query: 392  DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRG 449
              G +Y     G+G+ G    G ++ V  P +L+S++   + +++  +G  H + ++  G
Sbjct: 4004 ADGKLYA---TGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 4060

Query: 450  RLFGFGDNERAQLGHDTLRGCLEPTEI 476
             ++ +G+ E  +LGH     C  P  I
Sbjct: 4061 EVYSWGEAEDGKLGHGNRSPCDRPRVI 4087



 Score = 44.3 bits (103), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 41/139 (29%), Positives = 65/139 (46%), Gaps = 12/139 (8%)

Query: 344  VYTWGKGYCGALG--HGDEID-KTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 400
            V+ WG      LG   G +I   +  E LS+L     VQV    +  F +   G VY  G
Sbjct: 2962 VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALN---VVQVAGGSKSLFAVTVEGKVYSCG 3018

Query: 401  WMGFGSLGFPDRGVSD-KVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDN 457
                G LG    G+S   V  PR + +L ++ V +++  +G  H   +T  G++F +G+ 
Sbjct: 3019 EATNGRLGL---GMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEG 3075

Query: 458  ERAQLGHDTLRGCLEPTEI 476
            +  +LGH +   C +P  I
Sbjct: 3076 DDGKLGHFSRMNCDKPRLI 3094


>gi|345494033|ref|XP_001605647.2| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Nasonia
            vitripennis]
          Length = 4752

 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 98/314 (31%), Positives = 152/314 (48%), Gaps = 10/314 (3%)

Query: 155  TRINF-PSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEAL 213
            T ++F  S   VVQ   +   A+ V Q+  V+  G N     G    ++ I  P   E L
Sbjct: 2894 TSVSFLASDWEVVQEQMTAQRASDVQQNAAVYVWGLNDKDQLGGLKGSK-IKLPVHSEVL 2952

Query: 214  KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEE-VGSVV 272
              +    +  G      ++  G ++ CG  T+G+LG GD  +   PK I  L + +   V
Sbjct: 2953 SKLKPIHIAGGSKTLFVVSQEGKLYACGEGTNGRLGLGDNNNVGEPKPIPFLSQYIIKKV 3012

Query: 273  QIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGD 332
             + +G  + LA+T +G V+S+G G +  LGHG +    +PR I+  + K I    ++ G 
Sbjct: 3013 AVHSGGKHALALTQDGKVFSWGEGEDGKLGHGNRVSLDKPRLIEALKSKRIR--DIACGS 3070

Query: 333  EHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVC--ARKRKTFVL 390
             H  A+ S+G +YTWG G  G LGHGD      P+ + +L     +QV   +R  +T  L
Sbjct: 3071 GHSAAIASNGELYTWGLGEYGRLGHGDTTTHLKPKLVDALVGQRVIQVACGSRDAQTMAL 3130

Query: 391  VDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGR 450
             + GSVY +G   FG LG   RG SD    P  +D L    V Q+  G   ++ +T  G 
Sbjct: 3131 TEDGSVYSWGDGDFGKLG---RGGSDGCYSPLPVDRLNGLGVVQVECGAQFSLALTKYGE 3187

Query: 451  LFGFGDNERAQLGH 464
            ++ +G  +  +LGH
Sbjct: 3188 VWTWGKGDYFRLGH 3201



 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 93/318 (29%), Positives = 153/318 (48%), Gaps = 13/318 (4%)

Query: 161  SAAHVVQVSASENHAAFVLQSGQVFTCGDNS--SFCCGHRDTNRPIFRPRLVEALKGVPC 218
            SA   +Q++  E     V   G+V+  G  +      G  D+   +  P L+E+++ V  
Sbjct: 3925 SALRPIQLAGGEQTLFAVTADGKVYATGYGALGRLGTGGVDS---VMVPTLLESIQHVFI 3981

Query: 219  KQV--TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS-VVQIA 275
            K+V   +G      L+  GHV++ G    G+LGHG+ +    PK I  L  +G+ +V IA
Sbjct: 3982 KKVAVNSGGKHCLALSSEGHVYSWGEGDDGKLGHGNRITYDRPKLIEAL--LGTEIVDIA 4039

Query: 276  AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHV 335
             G  +  A++  G +Y++G G    LGHG+  D+L+P  +   +   +  V   +GD   
Sbjct: 4040 CGGHHSAAISSAGWLYTWGKGRYGRLGHGDSDDQLKPTVVTALQGYKVIDVACGSGDAQT 4099

Query: 336  VALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGS 395
            + +     V++WG G  G LG G      +P  + SL     V+V    + +  L  +G+
Sbjct: 4100 LCVTDDDNVWSWGDGDYGKLGRGGSDGCKVPMKIESLAGLGVVKVECGSQFSVALTRSGA 4159

Query: 396  VYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFG 455
            VY +G   +  LG    G  D V RPR + +L+   +  I+TG  H V  +D+G ++ +G
Sbjct: 4160 VYTWGKGDYHRLG---HGTDDHVRRPRKVSALQGKKIVSIATGSLHCVACSDKGEVYTWG 4216

Query: 456  DNERAQLGHDTLRGCLEP 473
            DN+  QLG  T      P
Sbjct: 4217 DNDEGQLGDGTTHAQQSP 4234



 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 91/320 (28%), Positives = 147/320 (45%), Gaps = 17/320 (5%)

Query: 155  TRINFPSAAHV------VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPR 208
            ++I  P  + V      + ++        V Q G+++ CG+ ++   G  D N  +  P+
Sbjct: 2941 SKIKLPVHSEVLSKLKPIHIAGGSKTLFVVSQEGKLYACGEGTNGRLGLGDNNN-VGEPK 2999

Query: 209  LVEALKGVPCKQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 266
             +  L     K+V   +G      LT  G V + G    G+LGHG+ +    P+ I  L+
Sbjct: 3000 PIPFLSQYIIKKVAVHSGGKHALALTQDGKVFSWGEGEDGKLGHGNRVSLDKPRLIEALK 3059

Query: 267  EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVV 326
                +  IA G  +  A+  NG +Y++G G    LGHG+    L+P+ +      G  V+
Sbjct: 3060 S-KRIRDIACGSGHSAAIASNGELYTWGLGEYGRLGHGDTTTHLKPKLVDAL--VGQRVI 3116

Query: 327  RVSAG--DEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARK 384
            +V+ G  D   +AL   G VY+WG G  G LG G       P P+  L     VQV    
Sbjct: 3117 QVACGSRDAQTMALTEDGSVYSWGDGDFGKLGRGGSDGCYSPLPVDRLNGLGVVQVECGA 3176

Query: 385  RKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV 444
            + +  L   G V+ +G   +  LG    G    V RP +++ LR   V  ++ G  H + 
Sbjct: 3177 QFSLALTKYGEVWTWGKGDYFRLG---HGNDHHVRRPTLVEGLRGKKVVHVAVGALHCLA 3233

Query: 445  VTDRGRLFGFGDNERAQLGH 464
            VTD G+++ +GDN+  Q G+
Sbjct: 3234 VTDAGQVYAWGDNDHGQQGN 3253



 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 102/329 (31%), Positives = 155/329 (47%), Gaps = 18/329 (5%)

Query: 131  VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHV--VQVSASENHAAFVLQSGQVFTCG 188
            +++CG    G LG G +         I F S   +  V V +   HA  + Q G+VF+ G
Sbjct: 2976 LYACGEGTNGRLGLG-DNNNVGEPKPIPFLSQYIIKKVAVHSGGKHALALTQDGKVFSWG 3034

Query: 189  DNSSFCCGHRDTNR-PIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQ 247
            +      GH   NR  + +PRL+EALK    + +  G   +  +   G ++T G   +G+
Sbjct: 3035 EGEDGKLGH--GNRVSLDKPRLIEALKSKRIRDIACGSGHSAAIASNGELYTWGLGEYGR 3092

Query: 248  LGHGDTLDRPTPKSIAPLEEVGS-VVQIAAGP--SYMLAVTGNGVVYSFGSGSNFCLGHG 304
            LGHGDT     PK +  L  VG  V+Q+A G   +  +A+T +G VYS+G G    LG G
Sbjct: 3093 LGHGDTTTHLKPKLVDAL--VGQRVIQVACGSRDAQTMALTEDGSVYSWGDGDFGKLGRG 3150

Query: 305  EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKT 364
                   P  +   R  G+ VV+V  G +  +AL   G V+TWGKG    LGHG++    
Sbjct: 3151 GSDGCYSPLPVD--RLNGLGVVQVECGAQFSLALTKYGEVWTWGKGDYFRLGHGNDHHVR 3208

Query: 365  LPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRIL 424
             P  +  L+    V V         + D G VY +G    G  G     V+ K   P ++
Sbjct: 3209 RPTLVEGLRGKKVVHVAVGALHCLAVTDAGQVYAWGDNDHGQQGNGSTMVNRK---PSLV 3265

Query: 425  DSLRAHHVSQISTGLYHTV--VVTDRGRL 451
             +L    V++++ G  H++  V+TD+  L
Sbjct: 3266 HNLEDAKVNRVACGSSHSIAWVLTDQPTL 3294



 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 94/325 (28%), Positives = 151/325 (46%), Gaps = 16/325 (4%)

Query: 125  LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHV----VQVSASENHAAFVLQ 180
            + ++  V++ G    G LG G   +  V        S  HV    V V++   H   +  
Sbjct: 3942 VTADGKVYATGYGALGRLGTGGVDSVMVPTL---LESIQHVFIKKVAVNSGGKHCLALSS 3998

Query: 181  SGQVFTCGDNSSFCCGHRDTNRPIF-RPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 239
             G V++ G+      GH   NR  + RP+L+EAL G     +  G + +  ++  G ++T
Sbjct: 3999 EGHVYSWGEGDDGKLGH--GNRITYDRPKLIEALLGTEIVDIACGGHHSAAISSAGWLYT 4056

Query: 240  CGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSV-VQIAAGPSYMLAVTGNGVVYSFGSGSN 298
             G   +G+LGHGD+ D+  P  +  L+    + V   +G +  L VT +  V+S+G G  
Sbjct: 4057 WGKGRYGRLGHGDSDDQLKPTVVTALQGYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDY 4116

Query: 299  FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 358
              LG G       P  I++    G+ VV+V  G +  VAL  SG VYTWGKG    LGHG
Sbjct: 4117 GKLGRGGSDGCKVPMKIESL--AGLGVVKVECGSQFSVALTRSGAVYTWGKGDYHRLGHG 4174

Query: 359  DEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKV 418
             +     P  +S+L+    V +           D G VY +G    G LG    G +   
Sbjct: 4175 TDDHVRRPRKVSALQGKKIVSIATGSLHCVACSDKGEVYTWGDNDEGQLG---DGTTHAQ 4231

Query: 419  LRPRILDSLRAHHVSQISTGLYHTV 443
              PR++ +L+  ++++++ G  HT+
Sbjct: 4232 QSPRLVHALQGKNITRVACGSAHTL 4256



 Score =  108 bits (270), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 76/247 (30%), Positives = 126/247 (51%), Gaps = 12/247 (4%)

Query: 235  GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
            G ++  G N  GQLG   G  +  P P +S++ L  +    Q+A G   + AVT +G VY
Sbjct: 3894 GAIYGWGHNHRGQLGGLEGAKVKLPLPCESLSALRPI----QLAGGEQTLFAVTADGKVY 3949

Query: 292  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 351
            + G G+   LG G     + P  +++ +   I  V V++G +H +AL S G+VY+WG+G 
Sbjct: 3950 ATGYGALGRLGTGGVDSVMVPTLLESIQHVFIKKVAVNSGGKHCLALSSEGHVYSWGEGD 4009

Query: 352  CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 411
             G LGHG+ I    P+ + +L     V +      +  +   G +Y +G   +G LG  D
Sbjct: 4010 DGKLGHGNRITYDRPKLIEALLGTEIVDIACGGHHSAAISSAGWLYTWGKGRYGRLGHGD 4069

Query: 412  RGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG 469
               SD  L+P ++ +L+ + V  ++  +G   T+ VTD   ++ +GD +  +LG     G
Sbjct: 4070 ---SDDQLKPTVVTALQGYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRGGSDG 4126

Query: 470  CLEPTEI 476
            C  P +I
Sbjct: 4127 CKVPMKI 4133



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 68/244 (27%), Positives = 117/244 (47%), Gaps = 10/244 (4%)

Query: 237  VHTCGSNTHGQLG--HGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 294
            V+  G N   QLG   G  +  P    +  L ++  +  IA G   +  V+  G +Y+ G
Sbjct: 2924 VYVWGLNDKDQLGGLKGSKIKLPVHSEV--LSKLKPI-HIAGGSKTLFVVSQEGKLYACG 2980

Query: 295  SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGA 354
             G+N  LG G+ ++  +P+ I    +  I  V V +G +H +AL   G V++WG+G  G 
Sbjct: 2981 EGTNGRLGLGDNNNVGEPKPIPFLSQYIIKKVAVHSGGKHALALTQDGKVFSWGEGEDGK 3040

Query: 355  LGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGV 414
            LGHG+ +    P  + +LKS     +      +  +   G +Y +G   +G LG  D   
Sbjct: 3041 LGHGNRVSLDKPRLIEALKSKRIRDIACGSGHSAAIASNGELYTWGLGEYGRLGHGDTTT 3100

Query: 415  SDKVLRPRILDSLRAHHVSQISTGLY--HTVVVTDRGRLFGFGDNERAQLGHDTLRGCLE 472
                L+P+++D+L    V Q++ G     T+ +T+ G ++ +GD +  +LG     GC  
Sbjct: 3101 H---LKPKLVDALVGQRVIQVACGSRDAQTMALTEDGSVYSWGDGDFGKLGRGGSDGCYS 3157

Query: 473  PTEI 476
            P  +
Sbjct: 3158 PLPV 3161



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 81/260 (31%), Positives = 124/260 (47%), Gaps = 13/260 (5%)

Query: 119  GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTR---INFPSAAHVVQVSASENHA 175
            G++   L  +  VFS G    G LGHG      VS  +   I    +  +  ++    H+
Sbjct: 3018 GKHALALTQDGKVFSWGEGEDGKLGHGNR----VSLDKPRLIEALKSKRIRDIACGSGHS 3073

Query: 176  AFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN--FTGFLTI 233
            A +  +G+++T G       GH DT   + +P+LV+AL G    QV  G     T  LT 
Sbjct: 3074 AAIASNGELYTWGLGEYGRLGHGDTTTHL-KPKLVDALVGQRVIQVACGSRDAQTMALTE 3132

Query: 234  RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
             G V++ G    G+LG G +    +P  +  L  +G VVQ+  G  + LA+T  G V+++
Sbjct: 3133 DGSVYSWGDGDFGKLGRGGSDGCYSPLPVDRLNGLG-VVQVECGAQFSLALTKYGEVWTW 3191

Query: 294  GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 353
            G G  F LGHG  H   +P  ++  R  G  VV V+ G  H +A+  +G VY WG    G
Sbjct: 3192 GKGDYFRLGHGNDHHVRRPTLVEGLR--GKKVVHVAVGALHCLAVTDAGQVYAWGDNDHG 3249

Query: 354  ALGHGDEIDKTLPEPLSSLK 373
              G+G  +    P  + +L+
Sbjct: 3250 QQGNGSTMVNRKPSLVHNLE 3269



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 72/244 (29%), Positives = 115/244 (47%), Gaps = 4/244 (1%)

Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 290
           LT +G V++ G+   G+LGHGD+     P+ I  L +  +V  IA G +Y  A++  G +
Sbjct: 516 LTTKGIVYSWGNGDGGRLGHGDSFSCDEPQVIEVLSD-RTVTYIACGSTYSAAISSTGEL 574

Query: 291 YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKG 350
            ++G GS   LGHG   D   P  +       +  V   +GD   + + +SG V++WG G
Sbjct: 575 LTWGRGSYGRLGHGICDDISIPTVVTALNGHTVTHVACGSGDSQTLCVTNSGIVFSWGDG 634

Query: 351 YCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFP 410
             G LG G      LP+ +  L     V+V    + +  L   G VY +G      LG  
Sbjct: 635 DYGKLGRGGSDGSKLPKIVDKLLDQNVVKVFCGGQFSAALTAHGEVYTWGKGDHYRLG-- 692

Query: 411 DRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGC 470
             G  + V  P++++ LR   V  +S G  H + +T+   ++G+G N+  Q+        
Sbjct: 693 -HGNEEHVRFPKLVEGLRNKKVRDLSVGNLHILAITEDQLVYGWGRNDACQIDPSLGAVV 751

Query: 471 LEPT 474
            EPT
Sbjct: 752 SEPT 755



 Score = 94.7 bits (234), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 85/315 (26%), Positives = 137/315 (43%), Gaps = 31/315 (9%)

Query: 93   VLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQC 151
            V   L+S++H           + + +G  H L +S+   V+S G    G LGHG      
Sbjct: 3969 VPTLLESIQH------VFIKKVAVNSGGKHCLALSSEGHVYSWGEGDDGKLGHGNR---- 4018

Query: 152  VSFTRINFPSA---AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPR 208
            +++ R     A     +V ++   +H+A +  +G ++T G       GH D++  + +P 
Sbjct: 4019 ITYDRPKLIEALLGTEIVDIACGGHHSAAISSAGWLYTWGKGRYGRLGHGDSDDQL-KPT 4077

Query: 209  LVEALKGVPCKQVTAGLNFTGFL--TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 266
            +V AL+G     V  G      L  T   +V + G   +G+LG G +     P  I  L 
Sbjct: 4078 VVTALQGYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRGGSDGCKVPMKIESLA 4137

Query: 267  EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVV 326
             +G VV++  G  + +A+T +G VY++G G    LGHG      +PR +     +G  +V
Sbjct: 4138 GLG-VVKVECGSQFSVALTRSGAVYTWGKGDYHRLGHGTDDHVRRPRKVSAL--QGKKIV 4194

Query: 327  RVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRK 386
             ++ G  H VA    G VYTWG    G LG G    +  P  + +L+            K
Sbjct: 4195 SIATGSLHCVACSDKGEVYTWGDNDEGQLGDGTTHAQQSPRLVHALQG-----------K 4243

Query: 387  TFVLVDTGSVYGFGW 401
                V  GS +   W
Sbjct: 4244 NITRVACGSAHTLAW 4258



 Score = 84.0 bits (206), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 66/242 (27%), Positives = 110/242 (45%), Gaps = 6/242 (2%)

Query: 162 AAHVVQVSASEN--HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCK 219
           A  VVQ+++  +  H   +   G V++ G+      GH D+      P+++E L      
Sbjct: 498 ADDVVQIASHPDGKHYLALTTKGIVYSWGNGDGGRLGHGDSFS-CDEPQVIEVLSDRTVT 556

Query: 220 QVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE-EVGSVVQIAAGP 278
            +  G  ++  ++  G + T G  ++G+LGHG   D   P  +  L     + V   +G 
Sbjct: 557 YIACGSTYSAAISSTGELLTWGRGSYGRLGHGICDDISIPTVVTALNGHTVTHVACGSGD 616

Query: 279 SYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
           S  L VT +G+V+S+G G    LG G       P+ +     +  +VV+V  G +   AL
Sbjct: 617 SQTLCVTNSGIVFSWGDGDYGKLGRGGSDGSKLPKIVDKLLDQ--NVVKVFCGGQFSAAL 674

Query: 339 DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYG 398
            + G VYTWGKG    LGHG+E     P+ +  L++     +         + +   VYG
Sbjct: 675 TAHGEVYTWGKGDHYRLGHGNEEHVRFPKLVEGLRNKKVRDLSVGNLHILAITEDQLVYG 734

Query: 399 FG 400
           +G
Sbjct: 735 WG 736



 Score = 82.0 bits (201), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 66/233 (28%), Positives = 114/233 (48%), Gaps = 7/233 (3%)

Query: 119 GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
           G+++  L +   V+S G+   G LGHG ++  C     I   S   V  ++    ++A +
Sbjct: 510 GKHYLALTTKGIVYSWGNGDGGRLGHG-DSFSCDEPQVIEVLSDRTVTYIACGSTYSAAI 568

Query: 179 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT--AGLNFTGFLTIRGH 236
             +G++ T G  S    GH   +  I  P +V AL G     V   +G + T  +T  G 
Sbjct: 569 SSTGELLTWGRGSYGRLGHGICDD-ISIPTVVTALNGHTVTHVACGSGDSQTLCVTNSGI 627

Query: 237 VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 296
           V + G   +G+LG G +     PK +  L +  +VV++  G  +  A+T +G VY++G G
Sbjct: 628 VFSWGDGDYGKLGRGGSDGSKLPKIVDKLLD-QNVVKVFCGGQFSAALTAHGEVYTWGKG 686

Query: 297 SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 349
            ++ LGHG +     P+ ++  R K +    +S G+ H++A+     VY WG+
Sbjct: 687 DHYRLGHGNEEHVRFPKLVEGLRNKKVR--DLSVGNLHILAITEDQLVYGWGR 737



 Score = 68.9 bits (167), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 52/201 (25%), Positives = 92/201 (45%), Gaps = 17/201 (8%)

Query: 265 LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH 324
           + E+G V Q+      +L ++ +G VY    GS          +   P+++  F    + 
Sbjct: 455 IAEIG-VKQLCCTERALLILSLSGKVYMMYYGS----------ETQYPQSVYGFADDVVQ 503

Query: 325 VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARK 384
           +     G +H +AL + G VY+WG G  G LGHGD      P+ +  L       +    
Sbjct: 504 IASHPDG-KHYLALTTKGIVYSWGNGDGGRLGHGDSFSCDEPQVIEVLSDRTVTYIACGS 562

Query: 385 RKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHT 442
             +  +  TG +  +G   +G LG    G+ D +  P ++ +L  H V+ ++  +G   T
Sbjct: 563 TYSAAISSTGELLTWGRGSYGRLG---HGICDDISIPTVVTALNGHTVTHVACGSGDSQT 619

Query: 443 VVVTDRGRLFGFGDNERAQLG 463
           + VT+ G +F +GD +  +LG
Sbjct: 620 LCVTNSGIVFSWGDGDYGKLG 640



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 41/162 (25%), Positives = 79/162 (48%), Gaps = 17/162 (10%)

Query: 305  EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKT 364
            ++HDE   + +Q   R+          ++  ++ D SG +Y WG  + G LG  +     
Sbjct: 3869 QEHDE---QLLQWLSRRP---------EDWTLSWDGSGAIYGWGHNHRGQLGGLEGAKVK 3916

Query: 365  LPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRIL 424
            LP P  SL +   +Q+   ++  F +   G VY  G+   G LG    G  D V+ P +L
Sbjct: 3917 LPLPCESLSALRPIQLAGGEQTLFAVTADGKVYATGYGALGRLG---TGGVDSVMVPTLL 3973

Query: 425  DSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDNERAQLGH 464
            +S++   + +++  +G  H + ++  G ++ +G+ +  +LGH
Sbjct: 3974 ESIQHVFIKKVAVNSGGKHCLALSSEGHVYSWGEGDDGKLGH 4015


>gi|37747571|gb|AAH60033.1| Herc4 protein [Mus musculus]
          Length = 1057

 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 91/276 (32%), Positives = 142/276 (51%), Gaps = 10/276 (3%)

Query: 204 IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 263
           +  PR  +       + V  GL  T F+   G V+TCG N  GQLGH  +  R  P+ + 
Sbjct: 22  VLEPRRSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKS--RKKPEQVV 79

Query: 264 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLG-HGEQHDELQPRAIQTFRRKG 322
            L+   ++V +A G ++ LA+   G VY++G  S+  LG  G +     PR I++     
Sbjct: 80  ALD-AQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSL--SD 136

Query: 323 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK-TLPEPLSSLKSHLAVQVC 381
           I +V+V+ G  H +AL  +  V+ WG+   G LG G +  K T P+ + SL     +QV 
Sbjct: 137 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCQKQTSPQLIKSLLGIPFMQVA 196

Query: 382 ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYH 441
           A    +FVL  +G+++G+G   FG LG  D   +D+ + P +L SLR+  +  I  G  H
Sbjct: 197 AGGAHSFVLTLSGAIFGWGRNKFGQLGLNDE--NDRYV-PNLLKSLRSQKIVYICCGEDH 253

Query: 442 TVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF 477
           T  +T  G +F FG     QLGH++    + P ++F
Sbjct: 254 TAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVF 289



 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 143/311 (45%), Gaps = 12/311 (3%)

Query: 156 RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 215
           R +F     V  V     H  FVL  G V+TCG N     GH  + +   +P  V AL  
Sbjct: 27  RSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRK---KPEQVVALDA 83

Query: 216 VPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLG-HGDTLDRPTPKSIAPLEEVGSVVQI 274
                V  G   T  L  +G V+  G ++ GQLG  G       P++I  L ++  +VQ+
Sbjct: 84  QNIVAVACGEAHTLALNDKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSLSDI-QIVQV 142

Query: 275 AAGPSYMLAVTGNGVVYSFGSGSNFCLGHG-EQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           A G  + LA++    V+ +G      LG G +   +  P+ I++    GI  ++V+AG  
Sbjct: 143 ACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCQKQTSPQLIKSLL--GIPFMQVAAGGA 200

Query: 334 HVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDT 393
           H   L  SG ++ WG+   G LG  DE D+ +P  L SL+S   V +C  +  T  L   
Sbjct: 201 HSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKE 260

Query: 394 GSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHT-VVVTDRGRLF 452
           G V+ FG  G+G LG      +   + PR +  L    V+Q + G  HT   V   GR++
Sbjct: 261 GGVFTFGAGGYGQLG---HNSTSHEINPRKVFELMGSIVTQAACGRQHTSAFVPSSGRIY 317

Query: 453 GFGDNERAQLG 463
            FG     QLG
Sbjct: 318 SFGLGGNGQLG 328



 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 79/291 (27%), Positives = 138/291 (47%), Gaps = 8/291 (2%)

Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 179
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V V+  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVACGEAHTLALN 100

Query: 180 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 239
             GQV+  G +S    G + +   I  PR +++L  +   QV  G   +  L+    V  
Sbjct: 101 DKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFC 160

Query: 240 CGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
            G N +GQLG G D   + +P+ I  L  +   +Q+AAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKYGQLGLGIDCQKQTSPQLIKSLLGI-PFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 299 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 358
             LG  +++D   P  +++ R + I  V +  G++H  AL   G V+T+G G  G LGH 
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRSQKI--VYICCGEDHTAALTKEGGVFTFGAGGYGQLGHN 277

Query: 359 DEIDKTLPEPLSSLKSHLAVQ-VCARKRKTFVLVDTGSVYGFGWMGFGSLG 408
               +  P  +  L   +  Q  C R+  +  +  +G +Y FG  G G LG
Sbjct: 278 STSHEINPRKVFELMGSIVTQAACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 84/274 (30%), Positives = 130/274 (47%), Gaps = 10/274 (3%)

Query: 98  QSVEHSSDIVETSAGNM-QITTGRYHTLLISNS-SVFSCGSSLCGVLG-HGPETTQCVSF 154
           +S +    +V   A N+  +  G  HTL +++   V++ G    G LG  G E  +C+  
Sbjct: 70  KSRKKPEQVVALDAQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQLGLQGSE--ECIRV 127

Query: 155 TR-INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEAL 213
            R I   S   +VQV+    H+  + ++ +VF  G N     G     +    P+L+++L
Sbjct: 128 PRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCQKQTSPQLIKSL 187

Query: 214 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
            G+P  QV AG   +  LT+ G +   G N  GQLG  D  DR  P  +  L     +V 
Sbjct: 188 LGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRS-QKIVY 246

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           I  G  +  A+T  G V++FG+G    LGH     E+ PR +  F   G  V + + G +
Sbjct: 247 ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQAACGRQ 304

Query: 334 HVVA-LDSSGYVYTWGKGYCGALGHGDEIDKTLP 366
           H  A + SSG +Y++G G  G LG G   ++  P
Sbjct: 305 HTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338



 Score = 78.2 bits (191), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 66/206 (32%), Positives = 98/206 (47%), Gaps = 6/206 (2%)

Query: 114 MQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +Q+  G YH+L +S +S VF  G +  G LG G +  +  S   I        +QV+A  
Sbjct: 140 VQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCQKQTSPQLIKSLLGIPFMQVAAGG 199

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            H+  +  SG +F  G N     G  D N   + P L+++L+      +  G + T  LT
Sbjct: 200 AHSFVLTLSGAIFGWGRNKFGQLGLNDENDR-YVPNLLKSLRSQKIVYICCGEDHTAALT 258

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVV 290
             G V T G+  +GQLGH  T     P+ +   E +GS+V Q A G  +  A V  +G +
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQAACGRQHTSAFVPSSGRI 316

Query: 291 YSFGSGSNFCLGHGEQHDELQPRAIQ 316
           YSFG G N  LG G   +   P  ++
Sbjct: 317 YSFGLGGNGQLGTGSTSNRKSPFTVK 342


>gi|74226109|dbj|BAE25272.1| unnamed protein product [Mus musculus]
          Length = 1057

 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 91/276 (32%), Positives = 142/276 (51%), Gaps = 10/276 (3%)

Query: 204 IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 263
           +  PR  +       + V  GL  T F+   G V+TCG N  GQLGH  +  R  P+ + 
Sbjct: 22  VLEPRRSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKS--RKKPEQVV 79

Query: 264 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLG-HGEQHDELQPRAIQTFRRKG 322
            L+   ++V +A G ++ LA+   G VY++G  S+  LG  G +     PR I++     
Sbjct: 80  ALD-AQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSL--SD 136

Query: 323 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK-TLPEPLSSLKSHLAVQVC 381
           I +V+V+ G  H +AL  +  V+ WG+   G LG G +  K T P+ + SL     +QV 
Sbjct: 137 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCQKQTSPQLIKSLLGIPFMQVA 196

Query: 382 ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYH 441
           A    +FVL  +G+++G+G   FG LG  D   +D+ + P +L SLR+  +  I  G  H
Sbjct: 197 AGGAHSFVLTLSGAIFGWGRNKFGQLGLNDE--NDRYV-PNLLKSLRSQKIVYICCGEDH 253

Query: 442 TVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF 477
           T  +T  G +F FG     QLGH++    + P ++F
Sbjct: 254 TAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVF 289



 Score =  125 bits (315), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 144/311 (46%), Gaps = 12/311 (3%)

Query: 156 RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 215
           R +F     V  V     H  FVL  G V+TCG N     GH  + +   +P  V AL  
Sbjct: 27  RSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRK---KPEQVVALDA 83

Query: 216 VPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLG-HGDTLDRPTPKSIAPLEEVGSVVQI 274
                V  G   T  L  +G V+  G ++ GQLG  G       P++I  L ++  +VQ+
Sbjct: 84  QNIVAVACGEAHTLALNDKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSLSDI-QIVQV 142

Query: 275 AAGPSYMLAVTGNGVVYSFGSGSNFCLGHG-EQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           A G  + LA++    V+ +G      LG G +   +  P+ I++    GI  ++V+AG  
Sbjct: 143 ACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCQKQTSPQLIKSLL--GIPFMQVAAGGA 200

Query: 334 HVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDT 393
           H   L  SG ++ WG+   G LG  DE D+ +P  L SL+S   V +C  +  T  L   
Sbjct: 201 HSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKE 260

Query: 394 GSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHT-VVVTDRGRLF 452
           G V+ FG  G+G LG      +   + PR +  L    V+Q++ G  HT   V   GR++
Sbjct: 261 GGVFTFGAGGYGQLG---HNSTSHEINPRKVFELMGSIVTQVACGRQHTSAFVPSSGRIY 317

Query: 453 GFGDNERAQLG 463
            FG     QLG
Sbjct: 318 SFGLGGNGQLG 328



 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 80/291 (27%), Positives = 139/291 (47%), Gaps = 8/291 (2%)

Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 179
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V V+  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVACGEAHTLALN 100

Query: 180 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 239
             GQV+  G +S    G + +   I  PR +++L  +   QV  G   +  L+    V  
Sbjct: 101 DKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFC 160

Query: 240 CGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
            G N +GQLG G D   + +P+ I  L  +   +Q+AAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKYGQLGLGIDCQKQTSPQLIKSLLGI-PFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 299 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 358
             LG  +++D   P  +++ R + I  V +  G++H  AL   G V+T+G G  G LGH 
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRSQKI--VYICCGEDHTAALTKEGGVFTFGAGGYGQLGHN 277

Query: 359 DEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLG 408
               +  P  +  L   +  QV C R+  +  +  +G +Y FG  G G LG
Sbjct: 278 STSHEINPRKVFELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  102 bits (253), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 85/274 (31%), Positives = 131/274 (47%), Gaps = 10/274 (3%)

Query: 98  QSVEHSSDIVETSAGNM-QITTGRYHTLLISNS-SVFSCGSSLCGVLG-HGPETTQCVSF 154
           +S +    +V   A N+  +  G  HTL +++   V++ G    G LG  G E  +C+  
Sbjct: 70  KSRKKPEQVVALDAQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQLGLQGSE--ECIRV 127

Query: 155 TR-INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEAL 213
            R I   S   +VQV+    H+  + ++ +VF  G N     G     +    P+L+++L
Sbjct: 128 PRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCQKQTSPQLIKSL 187

Query: 214 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
            G+P  QV AG   +  LT+ G +   G N  GQLG  D  DR  P  +  L     +V 
Sbjct: 188 LGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRS-QKIVY 246

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           I  G  +  A+T  G V++FG+G    LGH     E+ PR +  F   G  V +V+ G +
Sbjct: 247 ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQVACGRQ 304

Query: 334 HVVA-LDSSGYVYTWGKGYCGALGHGDEIDKTLP 366
           H  A + SSG +Y++G G  G LG G   ++  P
Sbjct: 305 HTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338



 Score = 79.7 bits (195), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 66/206 (32%), Positives = 99/206 (48%), Gaps = 6/206 (2%)

Query: 114 MQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +Q+  G YH+L +S +S VF  G +  G LG G +  +  S   I        +QV+A  
Sbjct: 140 VQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCQKQTSPQLIKSLLGIPFMQVAAGG 199

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            H+  +  SG +F  G N     G  D N   + P L+++L+      +  G + T  LT
Sbjct: 200 AHSFVLTLSGAIFGWGRNKFGQLGLNDENDR-YVPNLLKSLRSQKIVYICCGEDHTAALT 258

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVV 290
             G V T G+  +GQLGH  T     P+ +   E +GS+V Q+A G  +  A V  +G +
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQVACGRQHTSAFVPSSGRI 316

Query: 291 YSFGSGSNFCLGHGEQHDELQPRAIQ 316
           YSFG G N  LG G   +   P  ++
Sbjct: 317 YSFGLGGNGQLGTGSTSNRKSPFTVK 342


>gi|149043902|gb|EDL97353.1| rCG61079, isoform CRA_b [Rattus norvegicus]
          Length = 1049

 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 91/276 (32%), Positives = 142/276 (51%), Gaps = 10/276 (3%)

Query: 204 IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 263
           +  PR  +       + V  GL  T F+   G V+TCG N  GQLGH  +  R  P+ + 
Sbjct: 22  VLEPRKSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKS--RKKPEQVV 79

Query: 264 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLG-HGEQHDELQPRAIQTFRRKG 322
            L+   ++V ++ G ++ LA+   G VY++G  S+  LG  G +     PR I++     
Sbjct: 80  ALD-AQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSL--SD 136

Query: 323 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK-TLPEPLSSLKSHLAVQVC 381
           I +V+V+ G  H +AL  +  V+ WG+   G LG G E  K T P+ + SL     +QV 
Sbjct: 137 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIECQKQTSPQLIKSLLGIPFMQVA 196

Query: 382 ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYH 441
           A    +FVL  +G+++G+G   FG LG  D   +D+ + P +L SLR+  +  I  G  H
Sbjct: 197 AGGAHSFVLTLSGAIFGWGRNKFGQLGLNDE--NDRYV-PNLLKSLRSQKIVYICCGEDH 253

Query: 442 TVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF 477
           T  +T  G +F FG     QLGH++    + P ++F
Sbjct: 254 TAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVF 289



 Score =  127 bits (319), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 106/333 (31%), Positives = 154/333 (46%), Gaps = 13/333 (3%)

Query: 135 GSSLCGVLGHGPETTQCVSFTRI-NFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSF 193
           G++  G LG G    + V   R  +F     V  V     H  FVL  G V+TCG N   
Sbjct: 5   GNASYGQLGLGGIDEEIVLEPRKSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLG 64

Query: 194 CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLG-HGD 252
             GH  + +   +P  V AL       V+ G   T  L  +G V+  G ++ GQLG  G 
Sbjct: 65  QLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLQGS 121

Query: 253 TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHG-EQHDELQ 311
                 P++I  L ++  +VQ+A G  + LA++    V+ +G      LG G E   +  
Sbjct: 122 EECIRVPRNIKSLSDI-QIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIECQKQTS 180

Query: 312 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSS 371
           P+ I++    GI  ++V+AG  H   L  SG ++ WG+   G LG  DE D+ +P  L S
Sbjct: 181 PQLIKSLL--GIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKS 238

Query: 372 LKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHH 431
           L+S   V +C  +  T  L   G V+ FG  G+G LG      +   + PR +  L    
Sbjct: 239 LRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG---HNSTSHEINPRKVFELMGSI 295

Query: 432 VSQISTGLYHT-VVVTDRGRLFGFGDNERAQLG 463
           V+QI+ G  HT   V   GR++ FG     QLG
Sbjct: 296 VTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 80/291 (27%), Positives = 138/291 (47%), Gaps = 8/291 (2%)

Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 179
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V VS  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVSCGEAHTLALN 100

Query: 180 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 239
             GQV+  G +S    G + +   I  PR +++L  +   QV  G   +  L+    V  
Sbjct: 101 DKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFC 160

Query: 240 CGSNTHGQLGHGDTLDRPT-PKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
            G N +GQLG G    + T P+ I  L  +   +Q+AAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKYGQLGLGIECQKQTSPQLIKSLLGI-PFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 299 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 358
             LG  +++D   P  +++ R + I  V +  G++H  AL   G V+T+G G  G LGH 
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRSQKI--VYICCGEDHTAALTKEGGVFTFGAGGYGQLGHN 277

Query: 359 DEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLG 408
               +  P  +  L   +  Q+ C R+  +  +  +G +Y FG  G G LG
Sbjct: 278 STSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  102 bits (254), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 84/274 (30%), Positives = 132/274 (48%), Gaps = 10/274 (3%)

Query: 98  QSVEHSSDIVETSAGNM-QITTGRYHTLLISNS-SVFSCGSSLCGVLG-HGPETTQCVSF 154
           +S +    +V   A N+  ++ G  HTL +++   V++ G    G LG  G E  +C+  
Sbjct: 70  KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLQGSE--ECIRV 127

Query: 155 TR-INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEAL 213
            R I   S   +VQV+    H+  + ++ +VF  G N     G     +    P+L+++L
Sbjct: 128 PRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIECQKQTSPQLIKSL 187

Query: 214 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
            G+P  QV AG   +  LT+ G +   G N  GQLG  D  DR  P  +  L     +V 
Sbjct: 188 LGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRS-QKIVY 246

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           I  G  +  A+T  G V++FG+G    LGH     E+ PR +  F   G  V +++ G +
Sbjct: 247 ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQ 304

Query: 334 HVVA-LDSSGYVYTWGKGYCGALGHGDEIDKTLP 366
           H  A + SSG +Y++G G  G LG G   ++  P
Sbjct: 305 HTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338



 Score = 82.0 bits (201), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 68/206 (33%), Positives = 99/206 (48%), Gaps = 6/206 (2%)

Query: 114 MQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +Q+  G YH+L +S +S VF  G +  G LG G E  +  S   I        +QV+A  
Sbjct: 140 VQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIECQKQTSPQLIKSLLGIPFMQVAAGG 199

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            H+  +  SG +F  G N     G  D N   + P L+++L+      +  G + T  LT
Sbjct: 200 AHSFVLTLSGAIFGWGRNKFGQLGLNDENDR-YVPNLLKSLRSQKIVYICCGEDHTAALT 258

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVV 290
             G V T G+  +GQLGH  T     P+ +   E +GS+V QIA G  +  A V  +G +
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRI 316

Query: 291 YSFGSGSNFCLGHGEQHDELQPRAIQ 316
           YSFG G N  LG G   +   P  ++
Sbjct: 317 YSFGLGGNGQLGTGSTSNRKSPFTVK 342


>gi|312433980|ref|NP_084390.1| probable E3 ubiquitin-protein ligase HERC4 isoform 1 [Mus musculus]
 gi|126215720|sp|Q6PAV2.2|HERC4_MOUSE RecName: Full=Probable E3 ubiquitin-protein ligase HERC4; AltName:
           Full=HECT domain and RCC1-like domain-containing protein
           4
          Length = 1057

 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 91/276 (32%), Positives = 142/276 (51%), Gaps = 10/276 (3%)

Query: 204 IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 263
           +  PR  +       + V  GL  T F+   G V+TCG N  GQLGH  +  R  P+ + 
Sbjct: 22  VLEPRRSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKS--RKKPEQVV 79

Query: 264 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLG-HGEQHDELQPRAIQTFRRKG 322
            L+   ++V +A G ++ LA+   G VY++G  S+  LG  G +     PR I++     
Sbjct: 80  ALD-AQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSL--SD 136

Query: 323 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK-TLPEPLSSLKSHLAVQVC 381
           I +V+V+ G  H +AL  +  V+ WG+   G LG G +  K T P+ + SL     +QV 
Sbjct: 137 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCQKQTSPQLIKSLLGIPFMQVA 196

Query: 382 ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYH 441
           A    +FVL  +G+++G+G   FG LG  D   +D+ + P +L SLR+  +  I  G  H
Sbjct: 197 AGGAHSFVLTLSGAIFGWGRNKFGQLGLNDE--NDRYV-PNLLKSLRSQKIVYICCGEDH 253

Query: 442 TVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF 477
           T  +T  G +F FG     QLGH++    + P ++F
Sbjct: 254 TAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVF 289



 Score =  125 bits (315), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 144/311 (46%), Gaps = 12/311 (3%)

Query: 156 RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 215
           R +F     V  V     H  FVL  G V+TCG N     GH  + +   +P  V AL  
Sbjct: 27  RSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRK---KPEQVVALDA 83

Query: 216 VPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLG-HGDTLDRPTPKSIAPLEEVGSVVQI 274
                V  G   T  L  +G V+  G ++ GQLG  G       P++I  L ++  +VQ+
Sbjct: 84  QNIVAVACGEAHTLALNDKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSLSDI-QIVQV 142

Query: 275 AAGPSYMLAVTGNGVVYSFGSGSNFCLGHG-EQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           A G  + LA++    V+ +G      LG G +   +  P+ I++    GI  ++V+AG  
Sbjct: 143 ACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCQKQTSPQLIKSLL--GIPFMQVAAGGA 200

Query: 334 HVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDT 393
           H   L  SG ++ WG+   G LG  DE D+ +P  L SL+S   V +C  +  T  L   
Sbjct: 201 HSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKE 260

Query: 394 GSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHT-VVVTDRGRLF 452
           G V+ FG  G+G LG      +   + PR +  L    V+Q++ G  HT   V   GR++
Sbjct: 261 GGVFTFGAGGYGQLG---HNSTSHEINPRKVFELMGSIVTQVACGRQHTSAFVPSSGRIY 317

Query: 453 GFGDNERAQLG 463
            FG     QLG
Sbjct: 318 SFGLGGNGQLG 328



 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 80/291 (27%), Positives = 139/291 (47%), Gaps = 8/291 (2%)

Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 179
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V V+  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVACGEAHTLALN 100

Query: 180 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 239
             GQV+  G +S    G + +   I  PR +++L  +   QV  G   +  L+    V  
Sbjct: 101 DKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFC 160

Query: 240 CGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
            G N +GQLG G D   + +P+ I  L  +   +Q+AAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKYGQLGLGIDCQKQTSPQLIKSLLGI-PFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 299 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 358
             LG  +++D   P  +++ R + I  V +  G++H  AL   G V+T+G G  G LGH 
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRSQKI--VYICCGEDHTAALTKEGGVFTFGAGGYGQLGHN 277

Query: 359 DEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLG 408
               +  P  +  L   +  QV C R+  +  +  +G +Y FG  G G LG
Sbjct: 278 STSHEINPRKVFELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  102 bits (253), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 85/274 (31%), Positives = 131/274 (47%), Gaps = 10/274 (3%)

Query: 98  QSVEHSSDIVETSAGNM-QITTGRYHTLLISNS-SVFSCGSSLCGVLG-HGPETTQCVSF 154
           +S +    +V   A N+  +  G  HTL +++   V++ G    G LG  G E  +C+  
Sbjct: 70  KSRKKPEQVVALDAQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQLGLQGSE--ECIRV 127

Query: 155 TR-INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEAL 213
            R I   S   +VQV+    H+  + ++ +VF  G N     G     +    P+L+++L
Sbjct: 128 PRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCQKQTSPQLIKSL 187

Query: 214 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
            G+P  QV AG   +  LT+ G +   G N  GQLG  D  DR  P  +  L     +V 
Sbjct: 188 LGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRS-QKIVY 246

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           I  G  +  A+T  G V++FG+G    LGH     E+ PR +  F   G  V +V+ G +
Sbjct: 247 ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQVACGRQ 304

Query: 334 HVVA-LDSSGYVYTWGKGYCGALGHGDEIDKTLP 366
           H  A + SSG +Y++G G  G LG G   ++  P
Sbjct: 305 HTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338



 Score = 79.7 bits (195), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 66/206 (32%), Positives = 99/206 (48%), Gaps = 6/206 (2%)

Query: 114 MQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +Q+  G YH+L +S +S VF  G +  G LG G +  +  S   I        +QV+A  
Sbjct: 140 VQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCQKQTSPQLIKSLLGIPFMQVAAGG 199

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            H+  +  SG +F  G N     G  D N   + P L+++L+      +  G + T  LT
Sbjct: 200 AHSFVLTLSGAIFGWGRNKFGQLGLNDENDR-YVPNLLKSLRSQKIVYICCGEDHTAALT 258

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVV 290
             G V T G+  +GQLGH  T     P+ +   E +GS+V Q+A G  +  A V  +G +
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQVACGRQHTSAFVPSSGRI 316

Query: 291 YSFGSGSNFCLGHGEQHDELQPRAIQ 316
           YSFG G N  LG G   +   P  ++
Sbjct: 317 YSFGLGGNGQLGTGSTSNRKSPFTVK 342


>gi|148700105|gb|EDL32052.1| hect domain and RLD 4, isoform CRA_b [Mus musculus]
          Length = 1066

 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 91/276 (32%), Positives = 142/276 (51%), Gaps = 10/276 (3%)

Query: 204 IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 263
           +  PR  +       + V  GL  T F+   G V+TCG N  GQLGH  +  R  P+ + 
Sbjct: 31  VLEPRRSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKS--RKKPEQVV 88

Query: 264 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLG-HGEQHDELQPRAIQTFRRKG 322
            L+   ++V +A G ++ LA+   G VY++G  S+  LG  G +     PR I++     
Sbjct: 89  ALD-AQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSL--SD 145

Query: 323 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK-TLPEPLSSLKSHLAVQVC 381
           I +V+V+ G  H +AL  +  V+ WG+   G LG G +  K T P+ + SL     +QV 
Sbjct: 146 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCQKQTSPQLIKSLLGIPFMQVA 205

Query: 382 ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYH 441
           A    +FVL  +G+++G+G   FG LG  D   +D+ + P +L SLR+  +  I  G  H
Sbjct: 206 AGGAHSFVLTLSGAIFGWGRNKFGQLGLNDE--NDRYV-PNLLKSLRSQKIVYICCGEDH 262

Query: 442 TVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF 477
           T  +T  G +F FG     QLGH++    + P ++F
Sbjct: 263 TAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVF 298



 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 105/338 (31%), Positives = 155/338 (45%), Gaps = 13/338 (3%)

Query: 130 SVFSCGSSLCGVLGHGPETTQCV-SFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCG 188
           S+   G++  G LG G    + V    R +F     V  V     H  FVL  G V+TCG
Sbjct: 9   SMLCWGNASYGQLGLGGIDEEIVLEPRRSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCG 68

Query: 189 DNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQL 248
            N     GH  + +   +P  V AL       V  G   T  L  +G V+  G ++ GQL
Sbjct: 69  CNDLGQLGHEKSRK---KPEQVVALDAQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQL 125

Query: 249 G-HGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHG-EQ 306
           G  G       P++I  L ++  +VQ+A G  + LA++    V+ +G      LG G + 
Sbjct: 126 GLQGSEECIRVPRNIKSLSDI-QIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDC 184

Query: 307 HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP 366
             +  P+ I++    GI  ++V+AG  H   L  SG ++ WG+   G LG  DE D+ +P
Sbjct: 185 QKQTSPQLIKSLL--GIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVP 242

Query: 367 EPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDS 426
             L SL+S   V +C  +  T  L   G V+ FG  G+G LG      +   + PR +  
Sbjct: 243 NLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG---HNSTSHEINPRKVFE 299

Query: 427 LRAHHVSQISTGLYHT-VVVTDRGRLFGFGDNERAQLG 463
           L    V+Q++ G  HT   V   GR++ FG     QLG
Sbjct: 300 LMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLG 337



 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 80/291 (27%), Positives = 139/291 (47%), Gaps = 8/291 (2%)

Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 179
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V V+  E H   + 
Sbjct: 53  RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVACGEAHTLALN 109

Query: 180 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 239
             GQV+  G +S    G + +   I  PR +++L  +   QV  G   +  L+    V  
Sbjct: 110 DKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFC 169

Query: 240 CGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
            G N +GQLG G D   + +P+ I  L  +   +Q+AAG ++   +T +G ++ +G    
Sbjct: 170 WGQNKYGQLGLGIDCQKQTSPQLIKSLLGI-PFMQVAAGGAHSFVLTLSGAIFGWGRNKF 228

Query: 299 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 358
             LG  +++D   P  +++ R + I  V +  G++H  AL   G V+T+G G  G LGH 
Sbjct: 229 GQLGLNDENDRYVPNLLKSLRSQKI--VYICCGEDHTAALTKEGGVFTFGAGGYGQLGHN 286

Query: 359 DEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLG 408
               +  P  +  L   +  QV C R+  +  +  +G +Y FG  G G LG
Sbjct: 287 STSHEINPRKVFELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLG 337



 Score =  102 bits (253), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 85/274 (31%), Positives = 131/274 (47%), Gaps = 10/274 (3%)

Query: 98  QSVEHSSDIVETSAGNM-QITTGRYHTLLISNS-SVFSCGSSLCGVLG-HGPETTQCVSF 154
           +S +    +V   A N+  +  G  HTL +++   V++ G    G LG  G E  +C+  
Sbjct: 79  KSRKKPEQVVALDAQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQLGLQGSE--ECIRV 136

Query: 155 TR-INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEAL 213
            R I   S   +VQV+    H+  + ++ +VF  G N     G     +    P+L+++L
Sbjct: 137 PRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCQKQTSPQLIKSL 196

Query: 214 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
            G+P  QV AG   +  LT+ G +   G N  GQLG  D  DR  P  +  L     +V 
Sbjct: 197 LGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRS-QKIVY 255

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           I  G  +  A+T  G V++FG+G    LGH     E+ PR +  F   G  V +V+ G +
Sbjct: 256 ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQVACGRQ 313

Query: 334 HVVA-LDSSGYVYTWGKGYCGALGHGDEIDKTLP 366
           H  A + SSG +Y++G G  G LG G   ++  P
Sbjct: 314 HTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 347



 Score = 79.7 bits (195), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 66/206 (32%), Positives = 99/206 (48%), Gaps = 6/206 (2%)

Query: 114 MQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +Q+  G YH+L +S +S VF  G +  G LG G +  +  S   I        +QV+A  
Sbjct: 149 VQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCQKQTSPQLIKSLLGIPFMQVAAGG 208

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            H+  +  SG +F  G N     G  D N   + P L+++L+      +  G + T  LT
Sbjct: 209 AHSFVLTLSGAIFGWGRNKFGQLGLNDENDR-YVPNLLKSLRSQKIVYICCGEDHTAALT 267

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVV 290
             G V T G+  +GQLGH  T     P+ +   E +GS+V Q+A G  +  A V  +G +
Sbjct: 268 KEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQVACGRQHTSAFVPSSGRI 325

Query: 291 YSFGSGSNFCLGHGEQHDELQPRAIQ 316
           YSFG G N  LG G   +   P  ++
Sbjct: 326 YSFGLGGNGQLGTGSTSNRKSPFTVK 351


>gi|395527072|ref|XP_003765675.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Sarcophilus
            harrisii]
          Length = 4483

 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 95/328 (28%), Positives = 158/328 (48%), Gaps = 16/328 (4%)

Query: 161  SAAHVVQVSASENHAAFVLQSGQVFTCGD--NSSFCCGHRDTNRPIFRPRLVEALKGVPC 218
            SA +VVQV+        V   G+V+ CG+  N     G      PI  PR + AL     
Sbjct: 2742 SALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPI--PRQITALSNYVV 2799

Query: 219  KQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA 276
            K+V   +G      LT+ G + + G    G+LGH   ++   P+ I  L+    +  IA 
Sbjct: 2800 KKVAVHSGGRHAMALTVDGKIFSWGEGDDGKLGHFSRMNCDKPRLIEALK-TKRIRDIAC 2858

Query: 277  GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEH 334
            G S+  A+T +G +Y++G G    LGHG+   +L+P+ ++     G  V++V+ G  D  
Sbjct: 2859 GSSHSAAITSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLL--GHRVIQVACGSRDAQ 2916

Query: 335  VVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 394
             +AL   G V++WG G  G LG G      +P+ +  L      Q+    + +  L  +G
Sbjct: 2917 TLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSG 2976

Query: 395  SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 454
             V+ +G   +  LG    G    V +P++++ LR   +  ++ G  H + VTD G+++ +
Sbjct: 2977 VVWTWGKGDYFRLG---HGTDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDTGQVYAW 3033

Query: 455  GDNERAQLGHDTLRGCLEPTEIFIQEME 482
            GDN+  Q G+ T     +PT   +Q +E
Sbjct: 3034 GDNDHGQQGNGTTTVNRKPT--LVQGLE 3059



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 92/288 (31%), Positives = 142/288 (49%), Gaps = 10/288 (3%)

Query: 183  QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 242
            +VF  G N     G    ++ I  P   E L  +   QV  G      +T+ G V+ CG 
Sbjct: 2712 KVFVWGLNDKDQLGGLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGE 2770

Query: 243  NTHGQLGHG-DTLDRPTPKSIAPLEE-VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 300
             T+G+LG G  +   P P+ I  L   V   V + +G  + +A+T +G ++S+G G +  
Sbjct: 2771 ATNGRLGLGISSGTVPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKIFSWGEGDDGK 2830

Query: 301  LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 360
            LGH  + +  +PR I+  + K I    ++ G  H  A+ SSG +YTWG G  G LGHGD 
Sbjct: 2831 LGHFSRMNCDKPRLIEALKTKRIR--DIACGSSHSAAITSSGELYTWGLGEYGRLGHGDN 2888

Query: 361  IDKTLPEPLSSLKSHLAVQVC--ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKV 418
              +  P+ +  L  H  +QV   +R  +T  L D G V+ +G   FG LG   RG S+  
Sbjct: 2889 TTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLG---RGGSEGC 2945

Query: 419  LRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDT 466
              P+ ++ L    V QI  G   ++ +T  G ++ +G  +  +LGH T
Sbjct: 2946 NIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGT 2993



 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 84/280 (30%), Positives = 140/280 (50%), Gaps = 9/280 (3%)

Query: 166  VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 225
            V V++   H   +   G+V++ G+      GH + + P  RPR++E+L+G+    + AG 
Sbjct: 3796 VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRS-PCDRPRVIESLRGIEVVDIAAGG 3854

Query: 226  NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA--AGPSYMLA 283
              +  +T  G ++T G   +G+LGHGD+ D+  PK +  L+    V+ IA  +G +  L 
Sbjct: 3855 AHSACITAAGDLYTWGKGRYGRLGHGDSEDQLKPKLVEALQGY-RVIDIACGSGDAQTLC 3913

Query: 284  VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 343
            +T +  V+S+G G    LG G       P  I +    G+ VV+V  G +  VAL  SG 
Sbjct: 3914 LTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL--TGLGVVKVECGSQFSVALTKSGA 3971

Query: 344  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 403
            VYTWGKG    LGHG +     P  +  L+    + +           + G VY +G   
Sbjct: 3972 VYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDND 4031

Query: 404  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV 443
             G LG    G ++ + RPR++ +L+   +++++ G  HT+
Sbjct: 4032 EGQLG---DGTTNAIQRPRLVAALQGKKINRVACGSAHTL 4068



 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 83/269 (30%), Positives = 132/269 (49%), Gaps = 6/269 (2%)

Query: 207  PRLVEALKGVPCKQV--TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP 264
            P L+E+++ V  K+V   +G      L+  G V++ G    G+LGHG+      P+ I  
Sbjct: 3782 PTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIES 3841

Query: 265  LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH 324
            L  +  VV IAAG ++   +T  G +Y++G G    LGHG+  D+L+P+ ++  +   + 
Sbjct: 3842 LRGI-EVVDIAAGGAHSACITAAGDLYTWGKGRYGRLGHGDSEDQLKPKLVEALQGYRVI 3900

Query: 325  VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARK 384
             +   +GD   + L     V++WG G  G LG G      +P  + SL     V+V    
Sbjct: 3901 DIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGS 3960

Query: 385  RKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV 444
            + +  L  +G+VY +G   +  LG    G  D V RPR +  L+   V  I+TG  H V 
Sbjct: 3961 QFSVALTKSGAVYTWGKGDYHRLG---HGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 4017

Query: 445  VTDRGRLFGFGDNERAQLGHDTLRGCLEP 473
             T+ G ++ +GDN+  QLG  T      P
Sbjct: 4018 CTEDGEVYTWGDNDEGQLGDGTTNAIQRP 4046



 Score =  101 bits (252), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 82/265 (30%), Positives = 126/265 (47%), Gaps = 12/265 (4%)

Query: 96   FLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFT 155
             L+S++H    ++  A N   + G++   L S   V+S G +  G LGHG   + C    
Sbjct: 3784 LLESIQHV--FIKKVAVN---SGGKHCLALSSEGEVYSWGEAEDGKLGHG-NRSPCDRPR 3837

Query: 156  RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 215
             I       VV ++A   H+A +  +G ++T G       GH D+   + +P+LVEAL+G
Sbjct: 3838 VIESLRGIEVVDIAAGGAHSACITAAGDLYTWGKGRYGRLGHGDSEDQL-KPKLVEALQG 3896

Query: 216  VPCKQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
                 +   +G   T  LT    V + G   +G+LG G +     P  I  L  +G VV+
Sbjct: 3897 YRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLG-VVK 3955

Query: 274  IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
            +  G  + +A+T +G VY++G G    LGHG      +PR +Q    +G  V+ ++ G  
Sbjct: 3956 VECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGL--QGKKVIAIATGSL 4013

Query: 334  HVVALDSSGYVYTWGKGYCGALGHG 358
            H V     G VYTWG    G LG G
Sbjct: 4014 HCVCCTEDGEVYTWGDNDEGQLGDG 4038



 Score = 98.2 bits (243), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 74/247 (29%), Positives = 125/247 (50%), Gaps = 12/247 (4%)

Query: 235  GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
            G ++  G N  GQLG   G  +  PTP +++A L  +    Q+  G   + AVT +G +Y
Sbjct: 3706 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALAALRPI----QLIGGEQTLFAVTADGKLY 3761

Query: 292  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 351
            + G G+   LG G       P  +++ +   I  V V++G +H +AL S G VY+WG+  
Sbjct: 3762 ATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAE 3821

Query: 352  CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 411
             G LGHG+      P  + SL+    V + A    +  +   G +Y +G   +G LG   
Sbjct: 3822 DGKLGHGNRSPCDRPRVIESLRGIEVVDIAAGGAHSACITAAGDLYTWGKGRYGRLG--- 3878

Query: 412  RGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG 469
             G S+  L+P+++++L+ + V  I+  +G   T+ +TD   ++ +GD +  +LG     G
Sbjct: 3879 HGDSEDQLKPKLVEALQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDG 3938

Query: 470  CLEPTEI 476
            C  P +I
Sbjct: 3939 CKVPMKI 3945



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 76/242 (31%), Positives = 113/242 (46%), Gaps = 7/242 (2%)

Query: 119  GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
            GR+   L  +  +FS G    G LGH      C     I       +  ++   +H+A +
Sbjct: 2808 GRHAMALTVDGKIFSWGEGDDGKLGHF-SRMNCDKPRLIEALKTKRIRDIACGSSHSAAI 2866

Query: 179  LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN--FTGFLTIRGH 236
              SG+++T G       GH D N    +P++V+ L G    QV  G     T  LT  G 
Sbjct: 2867 TSSGELYTWGLGEYGRLGHGD-NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 2925

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 296
            V + G    G+LG G +     P++I  L   G V QI  G  + LA+T +GVV+++G G
Sbjct: 2926 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTWGKG 2984

Query: 297  SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 356
              F LGHG      +P+ ++  R  G  +V V+ G  H +A+  +G VY WG    G  G
Sbjct: 2985 DYFRLGHGTDVHVRKPQVVEGLR--GKKIVHVAVGALHCLAVTDTGQVYAWGDNDHGQQG 3042

Query: 357  HG 358
            +G
Sbjct: 3043 NG 3044



 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 66/225 (29%), Positives = 100/225 (44%), Gaps = 8/225 (3%)

Query: 116  ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
            I  G  H+  I++S  +++ G    G LGHG  TTQ +    +       V+QV+     
Sbjct: 2856 IACGSSHSAAITSSGELYTWGLGEYGRLGHGDNTTQ-LKPKMVKVLLGHRVIQVACGSRD 2914

Query: 175  AA--FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            A    +   G VF+ GD      G R  +     P+ +E L G    Q+  G  F+  LT
Sbjct: 2915 AQTLALTDEGLVFSWGDGDFGKLG-RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALT 2973

Query: 233  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
              G V T G   + +LGHG  +    P+ +  L     +V +A G  + LAVT  G VY+
Sbjct: 2974 KSGVVWTWGKGDYFRLGHGTDVHVRKPQVVEGLRG-KKIVHVAVGALHCLAVTDTGQVYA 3032

Query: 293  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
            +G   +   G+G      +P  +Q    +G  + RV+ G  H VA
Sbjct: 3033 WGDNDHGQQGNGTTTVNRKPTLVQGL--EGQKITRVACGSSHSVA 3075



 Score = 58.2 bits (139), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 40/121 (33%), Positives = 54/121 (44%), Gaps = 9/121 (7%)

Query: 288 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 347
           G V+S+G G    LG G       P+ I+    + + VV+V  G +  VAL   G VY+W
Sbjct: 409 GQVWSWGDGDYGKLGRGGSDGCKTPKLIEKL--QDLDVVKVRCGSQFSVALTKDGQVYSW 466

Query: 348 GKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKR-------KTFVLVDTGSVYGFG 400
           GKG    LGHG E     P+ L  L++ L    C  K+       K  V +  G    F 
Sbjct: 467 GKGDNQRLGHGTEEHVRYPKLLEGLQATLPQANCLSKKXXXXLDTKHIVGIACGPAQSFA 526

Query: 401 W 401
           W
Sbjct: 527 W 527



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 31/87 (35%), Positives = 49/87 (56%), Gaps = 1/87 (1%)

Query: 230 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 289
           F  I G V + G   +G+LG G +    TPK I  L+++  VV++  G  + +A+T +G 
Sbjct: 404 FSLIFGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL-DVVKVRCGSQFSVALTKDGQ 462

Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAIQ 316
           VYS+G G N  LGHG +     P+ ++
Sbjct: 463 VYSWGKGDNQRLGHGTEEHVRYPKLLE 489



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 49/167 (29%), Positives = 76/167 (45%), Gaps = 4/167 (2%)

Query: 118  TGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
            +G   TL L  + +V+S G    G LG G  +  C    +I+  +   VV+V      + 
Sbjct: 3906 SGDAQTLCLTDDDTVWSWGDGDYGKLGRG-GSDGCKVPMKIDSLTGLGVVKVECGSQFSV 3964

Query: 177  FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
             + +SG V+T G       GH   +  + RPR V+ L+G     +  G       T  G 
Sbjct: 3965 ALTKSGAVYTWGKGDYHRLGHGSDDH-VRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGE 4023

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
            V+T G N  GQLG G T     P+ +A L+    + ++A G ++ LA
Sbjct: 4024 VYTWGDNDEGQLGDGTTNAIQRPRLVAALQG-KKINRVACGSAHTLA 4069



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 35/147 (23%), Positives = 71/147 (48%), Gaps = 5/147 (3%)

Query: 332  DEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 391
            D+  ++   SG +Y WG  + G LG  +     +P P  +L +   +Q+   ++  F + 
Sbjct: 3696 DDWTLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALAALRPIQLIGGEQTLFAVT 3755

Query: 392  DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRG 449
              G +Y     G+G+ G    G ++ V  P +L+S++   + +++  +G  H + ++  G
Sbjct: 3756 ADGKLYA---TGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 3812

Query: 450  RLFGFGDNERAQLGHDTLRGCLEPTEI 476
             ++ +G+ E  +LGH     C  P  I
Sbjct: 3813 EVYSWGEAEDGKLGHGNRSPCDRPRVI 3839



 Score = 45.8 bits (107), Expect = 0.055,   Method: Compositional matrix adjust.
 Identities = 48/184 (26%), Positives = 80/184 (43%), Gaps = 21/184 (11%)

Query: 299  FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG-- 356
            F     E+ D+ +       R+K       ++G E    + +   V+ WG      LG  
Sbjct: 2677 FLASDNEEEDDEKANTGSLIRKK-------ASGLESAATIRTK--VFVWGLNDKDQLGGL 2727

Query: 357  HGDEID-KTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVS 415
             G +I   +  E LS+L     VQV    +  F +   G VY  G    G LG    G+S
Sbjct: 2728 KGSKIKVPSFSETLSALN---VVQVAGGSKSLFAVTVEGKVYACGEATNGRLGL---GIS 2781

Query: 416  D-KVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLE 472
               V  PR + +L  + V +++  +G  H + +T  G++F +G+ +  +LGH +   C +
Sbjct: 2782 SGTVPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKIFSWGEGDDGKLGHFSRMNCDK 2841

Query: 473  PTEI 476
            P  I
Sbjct: 2842 PRLI 2845



 Score = 41.6 bits (96), Expect = 0.98,   Method: Compositional matrix adjust.
 Identities = 22/73 (30%), Positives = 40/73 (54%), Gaps = 3/73 (4%)

Query: 394 GSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFG 453
           G V+ +G   +G LG   RG SD    P++++ L+   V ++  G   +V +T  G+++ 
Sbjct: 409 GQVWSWGDGDYGKLG---RGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSVALTKDGQVYS 465

Query: 454 FGDNERAQLGHDT 466
           +G  +  +LGH T
Sbjct: 466 WGKGDNQRLGHGT 478



 Score = 38.9 bits (89), Expect = 5.8,   Method: Compositional matrix adjust.
 Identities = 26/77 (33%), Positives = 39/77 (50%), Gaps = 1/77 (1%)

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 234
           A F L  GQV++ GD      G R  +     P+L+E L+ +   +V  G  F+  LT  
Sbjct: 402 AVFSLIFGQVWSWGDGDYGKLG-RGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSVALTKD 460

Query: 235 GHVHTCGSNTHGQLGHG 251
           G V++ G   + +LGHG
Sbjct: 461 GQVYSWGKGDNQRLGHG 477


>gi|348676412|gb|EGZ16230.1| hypothetical protein PHYSODRAFT_445559 [Phytophthora sojae]
          Length = 2434

 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 103/360 (28%), Positives = 160/360 (44%), Gaps = 36/360 (10%)

Query: 128 NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTC 187
           +  V+SCG +  G LGHG +T    SF RI       ++Q+ A   H   +   G+V TC
Sbjct: 432 DREVWSCGQNSYGELGHG-DTASRKSFERIESLQQKEIIQIGAGNEHTIALTVDGKVLTC 490

Query: 188 GDNSSFCCGHRDTNRPIFRPRLVEALKGVP------CKQVTA--GLNFTGFLTIRGHVHT 239
           G N +  CG   T R       V  L  +P        QV A  G   T  +T+ G   T
Sbjct: 491 GYNDNGQCGQGGTAR-------VSHLCEMPKMGDNAISQVHAYNGCEHTILVTMDGRAAT 543

Query: 240 CGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV------TGNGVVYSF 293
           CG N  GQLGHG+T     PK +  LE    +V++ +   Y   +      +G   +Y+F
Sbjct: 544 CGYNYRGQLGHGNTASESVPKIVRSLE--NRIVRLVSCSYYHTVMACEEDGSGQQYLYTF 601

Query: 294 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 353
           G      LGH +  D   P+ ++    +  HVV V+ G  H + + ++G  + +GK   G
Sbjct: 602 GRNDYGQLGHNDSIDRKVPQHVEAMGDQ--HVVSVACGQYHTMVVTATGKAFAFGKNDYG 659

Query: 354 ALGHGDEIDKTLPEPLSS-LKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDR 412
            LG     ++ +P  + + L+ H  +++      T VL     ++ FG   +G LG    
Sbjct: 660 QLGIDSMENQLVPVQVRAGLEKHECLEIRCGYYHTIVLCSGAHLFAFGRNDYGQLGLGRA 719

Query: 413 GVS---------DKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 463
             S          +    R+++ L    + + + G YHTV V+D G ++ FG N   QLG
Sbjct: 720 NASSTANLQLQQQRFSYARLIEELEGKDIVRFACGCYHTVAVSDNGVMYVFGRNNHGQLG 779



 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 77/246 (31%), Positives = 123/246 (50%), Gaps = 9/246 (3%)

Query: 236 HVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 295
            V +CG N++G+LGHGDT  R + + I  L++   ++QI AG  + +A+T +G V + G 
Sbjct: 434 EVWSCGQNSYGELGHGDTASRKSFERIESLQQ-KEIIQIGAGNEHTIALTVDGKVLTCGY 492

Query: 296 GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGAL 355
             N   G G          +       I  V    G EH + +   G   T G  Y G L
Sbjct: 493 NDNGQCGQGGTARVSHLCEMPKMGDNAISQVHAYNGCEHTILVTMDGRAATCGYNYRGQL 552

Query: 356 GHGDEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGS----VYGFGWMGFGSLGFP 410
           GHG+   +++P+ + SL++ +   V C+         + GS    +Y FG   +G LG  
Sbjct: 553 GHGNTASESVPKIVRSLENRIVRLVSCSYYHTVMACEEDGSGQQYLYTFGRNDYGQLGHN 612

Query: 411 DRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGC 470
           D  +  KV  P+ ++++   HV  ++ G YHT+VVT  G+ F FG N+  QLG D++   
Sbjct: 613 D-SIDRKV--PQHVEAMGDQHVVSVACGQYHTMVVTATGKAFAFGKNDYGQLGIDSMENQ 669

Query: 471 LEPTEI 476
           L P ++
Sbjct: 670 LVPVQV 675



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 86/353 (24%), Positives = 150/353 (42%), Gaps = 27/353 (7%)

Query: 114 MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHG--PETTQCVSFTRINFPSAAHVVQVSA 170
           +QI  G  HT+ L  +  V +CG +  G  G G     +      ++   + + V   + 
Sbjct: 469 IQIGAGNEHTIALTVDGKVLTCGYNDNGQCGQGGTARVSHLCEMPKMGDNAISQVHAYNG 528

Query: 171 SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
            E H   V   G+  TCG N     GH +T      P++V +L+    + V+     T  
Sbjct: 529 CE-HTILVTMDGRAATCGYNYRGQLGHGNTASESV-PKIVRSLENRIVRLVSCSYYHTVM 586

Query: 231 L-----TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 285
                 + + +++T G N +GQLGH D++DR  P+ +  + +   VV +A G  + + VT
Sbjct: 587 ACEEDGSGQQYLYTFGRNDYGQLGHNDSIDRKVPQHVEAMGD-QHVVSVACGQYHTMVVT 645

Query: 286 GNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVY 345
             G  ++FG      LG     ++L P  ++    K    + +  G  H + L S  +++
Sbjct: 646 ATGKAFAFGKNDYGQLGIDSMENQLVPVQVRAGLEKH-ECLEIRCGYYHTIVLCSGAHLF 704

Query: 346 TWGKGYCGALGHG------------DEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDT 393
            +G+   G LG G             +   +    +  L+    V+       T  + D 
Sbjct: 705 AFGRNDYGQLGLGRANASSTANLQLQQQRFSYARLIEELEGKDIVRFACGCYHTVAVSDN 764

Query: 394 GSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT 446
           G +Y FG    G LG  D   +++ + P  +D      V+ ++ G YHTVV+T
Sbjct: 765 GVMYVFGRNNHGQLGTGD---TNERVYPFPIDDFVGKRVALVAAGFYHTVVLT 814


>gi|356991167|ref|NP_001239305.1| E3 ubiquitin-protein ligase HERC2 [Gallus gallus]
          Length = 4839

 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 95/328 (28%), Positives = 158/328 (48%), Gaps = 16/328 (4%)

Query: 161  SAAHVVQVSASENHAAFVLQSGQVFTCGD--NSSFCCGHRDTNRPIFRPRLVEALKGVPC 218
            SA +VVQV+        V   G+V+ CG+  N     G      PI  PR + AL     
Sbjct: 2994 SALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPI--PRQITALSNYVV 3051

Query: 219  KQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA 276
            K+V   +G      LT+ G + + G    G+LGH   ++   P+ I  L+    +  IA 
Sbjct: 3052 KKVAVHSGGRHAMALTVDGKIFSWGEGDDGKLGHFSRMNCDKPRLIEALK-TKRIRDIAC 3110

Query: 277  GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEH 334
            G S+  A+T +G +Y++G G    LGHG+   +L+P+ ++     G  V++V+ G  D  
Sbjct: 3111 GSSHSAAITSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLL--GHRVIQVACGSRDAQ 3168

Query: 335  VVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 394
             +AL   G V++WG G  G LG G      +P+ +  L      Q+    + +  L  +G
Sbjct: 3169 TLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSG 3228

Query: 395  SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 454
             V+ +G   +  LG    G    V +P++++ LR   +  ++ G  H + VTD G+++ +
Sbjct: 3229 VVWTWGKGDYFRLG---HGTDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDTGQVYAW 3285

Query: 455  GDNERAQLGHDTLRGCLEPTEIFIQEME 482
            GDN+  Q G+ T     +PT   +Q +E
Sbjct: 3286 GDNDHGQQGNGTTTVNRKPT--LVQGLE 3311



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 92/288 (31%), Positives = 142/288 (49%), Gaps = 10/288 (3%)

Query: 183  QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 242
            +VF  G N     G    ++ I  P   E L  +   QV  G      +T+ G V+ CG 
Sbjct: 2964 KVFVWGLNDKDQLGGLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGE 3022

Query: 243  NTHGQLGHG-DTLDRPTPKSIAPLEE-VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 300
             T+G+LG G  +   P P+ I  L   V   V + +G  + +A+T +G ++S+G G +  
Sbjct: 3023 ATNGRLGLGISSGTVPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKIFSWGEGDDGK 3082

Query: 301  LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 360
            LGH  + +  +PR I+  + K I    ++ G  H  A+ SSG +YTWG G  G LGHGD 
Sbjct: 3083 LGHFSRMNCDKPRLIEALKTKRIR--DIACGSSHSAAITSSGELYTWGLGEYGRLGHGDN 3140

Query: 361  IDKTLPEPLSSLKSHLAVQVC--ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKV 418
              +  P+ +  L  H  +QV   +R  +T  L D G V+ +G   FG LG   RG S+  
Sbjct: 3141 TTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLG---RGGSEGC 3197

Query: 419  LRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDT 466
              P+ ++ L    V QI  G   ++ +T  G ++ +G  +  +LGH T
Sbjct: 3198 NIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGT 3245



 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 108/404 (26%), Positives = 181/404 (44%), Gaps = 24/404 (5%)

Query: 74   MSRNVQIELLNRCNGNWKRVL--RFLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSV 131
            M+ N  +++L+ C+  +KR    + +Q +    D    SAG               + ++
Sbjct: 3914 MADNENMDVLHECHDVFKREQDEQLVQWMNRRPDDWTLSAGG--------------SGTI 3959

Query: 132  FSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNS 191
            +  G +  G LG G E  +    T     +    VQ+   E     V   G+++  G  +
Sbjct: 3960 YGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGYGA 4018

Query: 192  SFCCGHRDTNRPIFRPRLVEALKGVPCKQV--TAGLNFTGFLTIRGHVHTCGSNTHGQLG 249
                G   T   +  P L+E+++ V  K+V   +G      L+  G V++ G    G+LG
Sbjct: 4019 GGRLGIGGTES-VSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLG 4077

Query: 250  HGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDE 309
            HG+      P+ I  L  +  VV IAAG ++   +T  G ++++G G    LGHG+  D+
Sbjct: 4078 HGNRSPCDRPRVIESLRGI-EVVDIAAGGAHSACITAAGDLFTWGKGRYGRLGHGDSEDQ 4136

Query: 310  LQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPL 369
            L+P+ ++  +   +  +   +GD   + L     V++WG G  G LG G      +P  +
Sbjct: 4137 LKPKLVEALQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKI 4196

Query: 370  SSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRA 429
             SL     V+V    + +  L  +G+VY +G   +  LG    G  D V RPR +  L+ 
Sbjct: 4197 DSLTDLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLG---HGSDDHVRRPRQVQGLQG 4253

Query: 430  HHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEP 473
              V  I+TG  H V  T+ G ++ +GDN+  QLG  T      P
Sbjct: 4254 KKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRP 4297



 Score =  121 bits (303), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 84/280 (30%), Positives = 138/280 (49%), Gaps = 9/280 (3%)

Query: 166  VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 225
            V V++   H   +   G+V++ G+      GH + + P  RPR++E+L+G+    + AG 
Sbjct: 4047 VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRS-PCDRPRVIESLRGIEVVDIAAGG 4105

Query: 226  NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA--AGPSYMLA 283
              +  +T  G + T G   +G+LGHGD+ D+  PK +  L+    V+ IA  +G +  L 
Sbjct: 4106 AHSACITAAGDLFTWGKGRYGRLGHGDSEDQLKPKLVEALQGY-RVIDIACGSGDAQTLC 4164

Query: 284  VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 343
            +T +  V+S+G G    LG G       P  I +    G  VV+V  G +  VAL  SG 
Sbjct: 4165 LTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTDLG--VVKVECGSQFSVALTKSGA 4222

Query: 344  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 403
            VYTWGKG    LGHG +     P  +  L+    + +           + G VY +G   
Sbjct: 4223 VYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDND 4282

Query: 404  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV 443
             G LG    G ++ + RPR++ +L+   +++++ G  HT+
Sbjct: 4283 EGQLG---DGTTNAIQRPRLVAALQGKKINRVACGSAHTL 4319



 Score =  119 bits (298), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 94/311 (30%), Positives = 153/311 (49%), Gaps = 24/311 (7%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           VVQ++ +E     + ++G+V+T   NS       DT      P+LV++L      ++ A 
Sbjct: 454 VVQIACAEKRFLILSRNGRVYTQAYNS-------DT----LGPQLVQSLASRNIVKIAAH 502

Query: 225 LNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGS-VVQIAAGPS 279
            +   +L +   G V + G    G+LGHGDT+    PK I+ L  ++ G  VV IA G +
Sbjct: 503 SDGHHYLALSANGEVFSWGCGDGGRLGHGDTVPLEEPKLISALSGKQAGKHVVHIACGST 562

Query: 280 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS--AGDEHVVA 337
           Y  A+T  G +Y++G G+   LGHG   D+  P  +     KG+ V+ VS  +GD   +A
Sbjct: 563 YSAAITAEGELYTWGRGNYGRLGHGSSEDQTIPMLVTGL--KGLKVIDVSCGSGDAQTLA 620

Query: 338 LDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVY 397
           +  +G V++WG G  G LG G       P+ +  L+    V+V    + +  L   G VY
Sbjct: 621 VTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDIVKVRCGSQFSIALTKDGQVY 680

Query: 398 GFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDN 457
            +G      LG    G  + V  P++L+ L+   V  ++ G  H + +T+   +  +G N
Sbjct: 681 TWGKGDNQRLG---HGTEEHVRYPKLLEGLKGKKVIDVAAGSTHCLALTEDSEVHSWGSN 737

Query: 458 ERAQLGHDTLR 468
           ++ Q   DTLR
Sbjct: 738 DQCQ-HFDTLR 747



 Score =  101 bits (252), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 83/283 (29%), Positives = 136/283 (48%), Gaps = 24/283 (8%)

Query: 95  RFLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHG-------PE 147
           + +QS+  S +IV+ +A     + G ++  L +N  VFS G    G LGHG       P+
Sbjct: 486 QLVQSLA-SRNIVKIAAH----SDGHHYLALSANGEVFSWGCGDGGRLGHGDTVPLEEPK 540

Query: 148 TTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRP 207
               +S  +    +  HVV ++    ++A +   G+++T G  +    GH  +      P
Sbjct: 541 LISALSGKQ----AGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDQTI-P 595

Query: 208 RLVEALKGVPCKQVTAGLNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL 265
            LV  LKG+    V+ G      L +   G V + G   +G+LG G +    TPK I  L
Sbjct: 596 MLVTGLKGLKVIDVSCGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKL 655

Query: 266 EEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHV 325
           +++  +V++  G  + +A+T +G VY++G G N  LGHG +     P+ ++    KG  V
Sbjct: 656 QDL-DIVKVRCGSQFSIALTKDGQVYTWGKGDNQRLGHGTEEHVRYPKLLEGL--KGKKV 712

Query: 326 VRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEP 368
           + V+AG  H +AL     V++WG        H D +  T PEP
Sbjct: 713 IDVAAGSTHCLALTEDSEVHSWGSN--DQCQHFDTLRITKPEP 753



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 76/242 (31%), Positives = 113/242 (46%), Gaps = 7/242 (2%)

Query: 119  GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
            GR+   L  +  +FS G    G LGH      C     I       +  ++   +H+A +
Sbjct: 3060 GRHAMALTVDGKIFSWGEGDDGKLGHF-SRMNCDKPRLIEALKTKRIRDIACGSSHSAAI 3118

Query: 179  LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN--FTGFLTIRGH 236
              SG+++T G       GH D N    +P++V+ L G    QV  G     T  LT  G 
Sbjct: 3119 TSSGELYTWGLGEYGRLGHGD-NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 3177

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 296
            V + G    G+LG G +     P++I  L   G V QI  G  + LA+T +GVV+++G G
Sbjct: 3178 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTWGKG 3236

Query: 297  SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 356
              F LGHG      +P+ ++  R  G  +V V+ G  H +A+  +G VY WG    G  G
Sbjct: 3237 DYFRLGHGTDVHVRKPQVVEGLR--GKKIVHVAVGALHCLAVTDTGQVYAWGDNDHGQQG 3294

Query: 357  HG 358
            +G
Sbjct: 3295 NG 3296



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 74/247 (29%), Positives = 125/247 (50%), Gaps = 12/247 (4%)

Query: 235  GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
            G ++  G N  GQLG   G  +  PTP +++A L  V    Q+  G   + AVT +G +Y
Sbjct: 3957 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPV----QLIGGEQTLFAVTADGKLY 4012

Query: 292  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 351
            + G G+   LG G       P  +++ +   I  V V++G +H +AL S G VY+WG+  
Sbjct: 4013 ATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAE 4072

Query: 352  CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 411
             G LGHG+      P  + SL+    V + A    +  +   G ++ +G   +G LG   
Sbjct: 4073 DGKLGHGNRSPCDRPRVIESLRGIEVVDIAAGGAHSACITAAGDLFTWGKGRYGRLG--- 4129

Query: 412  RGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG 469
             G S+  L+P+++++L+ + V  I+  +G   T+ +TD   ++ +GD +  +LG     G
Sbjct: 4130 HGDSEDQLKPKLVEALQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDG 4189

Query: 470  CLEPTEI 476
            C  P +I
Sbjct: 4190 CKVPMKI 4196



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 60/219 (27%), Positives = 103/219 (47%), Gaps = 21/219 (9%)

Query: 271 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 330
           VVQIA      L ++ NG VY+    S          D L P+ +Q+   + I  +   +
Sbjct: 454 VVQIACAEKRFLILSRNGRVYTQAYNS----------DTLGPQLVQSLASRNIVKIAAHS 503

Query: 331 GDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLA----VQVCARKRK 386
              H +AL ++G V++WG G  G LGHGD +    P+ +S+L    A    V +      
Sbjct: 504 DGHHYLALSANGEVFSWGCGDGGRLGHGDTVPLEEPKLISALSGKQAGKHVVHIACGSTY 563

Query: 387 TFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVV 444
           +  +   G +Y +G   +G LG    G S+    P ++  L+   V  +S  +G   T+ 
Sbjct: 564 SAAITAEGELYTWGRGNYGRLG---HGSSEDQTIPMLVTGLKGLKVIDVSCGSGDAQTLA 620

Query: 445 VTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQEMEE 483
           VT+ G+++ +GD +  +LG     GC  P    I+++++
Sbjct: 621 VTENGQVWSWGDGDYGKLGRGGSDGCKTPK--LIEKLQD 657



 Score = 69.7 bits (169), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 77/300 (25%), Positives = 121/300 (40%), Gaps = 64/300 (21%)

Query: 96   FLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFT 155
             L+S++H    ++  A N   + G++   L S   V+S G +  G LGHG   + C    
Sbjct: 4035 LLESIQHV--FIKKVAVN---SGGKHCLALSSEGEVYSWGEAEDGKLGHG-NRSPCDRPR 4088

Query: 156  RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 215
             I       VV ++A   H+A +  +G +FT G       GH D+   + +P+LVEAL+G
Sbjct: 4089 VIESLRGIEVVDIAAGGAHSACITAAGDLFTWGKGRYGRLGHGDSEDQL-KPKLVEALQG 4147

Query: 216  --------------------------------------------VPCK----------QV 221
                                                        VP K          +V
Sbjct: 4148 YRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTDLGVVKV 4207

Query: 222  TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 281
              G  F+  LT  G V+T G   + +LGHG       P+ +  L+    V+ IA G  + 
Sbjct: 4208 ECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQG-KKVIAIATGSLHC 4266

Query: 282  LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 341
            +  T +G VY++G      LG G  +   +PR +   + K I+  RV+ G  H +A  +S
Sbjct: 4267 VCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKIN--RVACGSAHTLAWSTS 4324



 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 66/225 (29%), Positives = 100/225 (44%), Gaps = 8/225 (3%)

Query: 116  ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
            I  G  H+  I++S  +++ G    G LGHG  TTQ +    +       V+QV+     
Sbjct: 3108 IACGSSHSAAITSSGELYTWGLGEYGRLGHGDNTTQ-LKPKMVKVLLGHRVIQVACGSRD 3166

Query: 175  AA--FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            A    +   G VF+ GD      G R  +     P+ +E L G    Q+  G  F+  LT
Sbjct: 3167 AQTLALTDEGLVFSWGDGDFGKLG-RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALT 3225

Query: 233  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
              G V T G   + +LGHG  +    P+ +  L     +V +A G  + LAVT  G VY+
Sbjct: 3226 KSGVVWTWGKGDYFRLGHGTDVHVRKPQVVEGLRG-KKIVHVAVGALHCLAVTDTGQVYA 3284

Query: 293  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
            +G   +   G+G      +P  +Q    +G  + RV+ G  H VA
Sbjct: 3285 WGDNDHGQQGNGTTTVNRKPTLVQGL--EGQKITRVACGSSHSVA 3327



 Score = 55.8 bits (133), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 53/169 (31%), Positives = 76/169 (44%), Gaps = 8/169 (4%)

Query: 118 TGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
           +G   TL ++ N  V+S G    G LG G  +  C +   I       +V+V      + 
Sbjct: 613 SGDAQTLAVTENGQVWSWGDGDYGKLGRG-GSDGCKTPKLIEKLQDLDIVKVRCGSQFSI 671

Query: 177 FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
            + + GQV+T G   +   GH  T   +  P+L+E LKG     V AG      LT    
Sbjct: 672 ALTKDGQVYTWGKGDNQRLGH-GTEEHVRYPKLLEGLKGKKVIDVAAGSTHCLALTEDSE 730

Query: 237 VHTCGSNTHGQLGHGDTL--DRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
           VH+ GSN   Q  H DTL   +P P ++  L +   +V IA GP+   A
Sbjct: 731 VHSWGSNDQCQ--HFDTLRITKPEPAALPGL-DTKHIVGIACGPAQSFA 776



 Score = 46.2 bits (108), Expect = 0.034,   Method: Compositional matrix adjust.
 Identities = 49/184 (26%), Positives = 80/184 (43%), Gaps = 21/184 (11%)

Query: 299  FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG-- 356
            F     E+ D+ +       R+K       +AG E    + +   V+ WG      LG  
Sbjct: 2929 FLASDNEEEDDDKANTGSLVRKK-------AAGLESAATIRTK--VFVWGLNDKDQLGGL 2979

Query: 357  HGDEID-KTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVS 415
             G +I   +  E LS+L     VQV    +  F +   G VY  G    G LG    G+S
Sbjct: 2980 KGSKIKVPSFSETLSALN---VVQVAGGSKSLFAVTVEGKVYACGEATNGRLGL---GIS 3033

Query: 416  D-KVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLE 472
               V  PR + +L  + V +++  +G  H + +T  G++F +G+ +  +LGH +   C +
Sbjct: 3034 SGTVPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKIFSWGEGDDGKLGHFSRMNCDK 3093

Query: 473  PTEI 476
            P  I
Sbjct: 3094 PRLI 3097


>gi|344298015|ref|XP_003420690.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
            HERC2-like [Loxodonta africana]
          Length = 4838

 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 96/328 (29%), Positives = 158/328 (48%), Gaps = 16/328 (4%)

Query: 161  SAAHVVQVSASENHAAFVLQSGQVFTCGD--NSSFCCGHRDTNRPIFRPRLVEALKGVPC 218
            SA +VVQV+        V   G+V+ CG+  N     G      PI  PR + AL     
Sbjct: 2992 SALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGLSSGTVPI--PRQITALSSYVV 3049

Query: 219  KQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA 276
            K+V   +G      LT+ G V + G    G+LGH   ++   P+ I  L+    +  IA 
Sbjct: 3050 KKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALK-TKRIRDIAC 3108

Query: 277  GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEH 334
            G S+  A+T +G +Y++G G    LGHG+   +L+P+ ++     G  V++V+ G  D  
Sbjct: 3109 GSSHSAAITSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLL--GHRVIQVACGSRDAQ 3166

Query: 335  VVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 394
             +AL   G V++WG G  G LG G      +P+ +  L      Q+    + +  L  +G
Sbjct: 3167 TLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSG 3226

Query: 395  SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 454
             V+ +G   +  LG    G    V +P++++ LR   +  ++ G  H + VTD G+++ +
Sbjct: 3227 VVWTWGKGDYFRLG---HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAW 3283

Query: 455  GDNERAQLGHDTLRGCLEPTEIFIQEME 482
            GDN+  Q G+ T     +PT   +Q +E
Sbjct: 3284 GDNDHGQQGNGTTTVNRKPT--LVQGLE 3309



 Score =  125 bits (313), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 92/286 (32%), Positives = 140/286 (48%), Gaps = 10/286 (3%)

Query: 183  QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 242
            +VF  G N     G    ++ I  P   E L  +   QV  G      +T+ G V+ CG 
Sbjct: 2962 KVFVWGLNDKDQLGGLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGE 3020

Query: 243  NTHGQLGHG-DTLDRPTPKSIAPLEE-VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 300
             T+G+LG G  +   P P+ I  L   V   V + +G  +  A+T +G V+S+G G +  
Sbjct: 3021 ATNGRLGLGLSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGK 3080

Query: 301  LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 360
            LGH  + +  +PR I+  + K I    ++ G  H  A+ SSG +YTWG G  G LGHGD 
Sbjct: 3081 LGHFSRMNCDKPRLIEALKTKRIR--DIACGSSHSAAITSSGELYTWGLGEYGRLGHGDN 3138

Query: 361  IDKTLPEPLSSLKSHLAVQVC--ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKV 418
              +  P+ +  L  H  +QV   +R  +T  L D G V+ +G   FG LG   RG S+  
Sbjct: 3139 TTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLG---RGGSEGC 3195

Query: 419  LRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 464
              P+ ++ L    V QI  G   ++ +T  G ++ +G  +  +LGH
Sbjct: 3196 NIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGH 3241



 Score =  122 bits (307), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 87/280 (31%), Positives = 139/280 (49%), Gaps = 9/280 (3%)

Query: 166  VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 225
            V V++   H   +   G+V++ G+      GH + + P  RPR+VE+L+G+    V AG 
Sbjct: 4046 VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRS-PCDRPRVVESLRGIEVVDVAAGG 4104

Query: 226  NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA--AGPSYMLA 283
              +  +T  G ++T G   +G+LGH D+ D+  PK +  L+    VV IA  +G +  L 
Sbjct: 4105 AHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQG-HRVVDIACGSGDAQTLC 4163

Query: 284  VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 343
            +T +  V+S+G G    LG G       P  I +    G+ VV+V  G +  VAL  SG 
Sbjct: 4164 LTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL--TGLGVVKVECGSQFSVALTKSGA 4221

Query: 344  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 403
            VYTWGKG    LGHG +     P  +  L+    + +           + G VY +G   
Sbjct: 4222 VYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDND 4281

Query: 404  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV 443
             G LG    G ++ + RPR++ +L+   V++++ G  HT+
Sbjct: 4282 EGQLG---DGTTNAIQRPRLVAALQGKKVNRVACGSAHTL 4318



 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 90/315 (28%), Positives = 147/315 (46%), Gaps = 7/315 (2%)

Query: 161  SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQ 220
            +A   VQ+   E     V   G+++  G  +    G   T   +  P L+E+++ V  K+
Sbjct: 3987 AALRPVQLIGGEQTLFAVTADGKLYATGYGAGGRLGIGGTES-VSTPTLLESVQHVFIKK 4045

Query: 221  V--TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGP 278
            V   +G      L+  G V++ G    G+LGHG+      P+ +  L  +  VV +AAG 
Sbjct: 4046 VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVVESLRGI-EVVDVAAGG 4104

Query: 279  SYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
            ++   VT  G +Y++G G    LGH +  D+L+P+ ++  +   +  +   +GD   + L
Sbjct: 4105 AHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCL 4164

Query: 339  DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYG 398
                 V++WG G  G LG G      +P  + SL     V+V    + +  L  +G+VY 
Sbjct: 4165 TDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYT 4224

Query: 399  FGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNE 458
            +G   +  LG    G  D V RPR +  L+   V  I+TG  H V  T+ G ++ +GDN+
Sbjct: 4225 WGKGDYHRLG---HGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDND 4281

Query: 459  RAQLGHDTLRGCLEP 473
              QLG  T      P
Sbjct: 4282 EGQLGDGTTNAIQRP 4296



 Score =  119 bits (297), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 91/311 (29%), Positives = 150/311 (48%), Gaps = 24/311 (7%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V Q++ +E     + +SG+V+T   NS               P+LV+ L      ++ A 
Sbjct: 454 VTQIACAEKRFLILSRSGRVYTQAYNSD-----------ALAPQLVQGLASRNIIKIAAH 502

Query: 225 LNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGS-VVQIAAGPS 279
            +   +L +   G V++ G    G+LGHGDT+    PK I+    ++ G  VV IA G +
Sbjct: 503 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGST 562

Query: 280 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS--AGDEHVVA 337
           Y  A+T  G +Y++G G+   LGHG   DE+ P  +     KG+ V+ V+  +GD   +A
Sbjct: 563 YSAAITAEGELYTWGRGNYGRLGHGSSEDEVIPVLVAGL--KGLKVIDVACGSGDAQTLA 620

Query: 338 LDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVY 397
           +  +G V++WG G  G LG G       P+ +  L+    V+V    + +  L   G VY
Sbjct: 621 VTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVY 680

Query: 398 GFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDN 457
            +G      LG    G  + V  P++L+ L+   V  ++ G  H + +T+   +  +G N
Sbjct: 681 SWGKGDNQRLG---HGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSN 737

Query: 458 ERAQLGHDTLR 468
           ++ Q   DTLR
Sbjct: 738 DQCQ-HFDTLR 747



 Score =  102 bits (253), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 84/265 (31%), Positives = 126/265 (47%), Gaps = 12/265 (4%)

Query: 96   FLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFT 155
             L+SV+H    ++  A N   + G++   L S   V+S G +  G LGHG   + C    
Sbjct: 4034 LLESVQHV--FIKKVAVN---SGGKHCLALSSEGEVYSWGEAEDGKLGHG-NRSPCDRPR 4087

Query: 156  RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 215
             +       VV V+A   H+A V  +G ++T G       GH D+   + +P+LVEAL+G
Sbjct: 4088 VVESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQL-KPKLVEALQG 4146

Query: 216  VPCKQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
                 +   +G   T  LT    V + G   +G+LG G +     P  I  L  +G VV+
Sbjct: 4147 HRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLG-VVK 4205

Query: 274  IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
            +  G  + +A+T +G VY++G G    LGHG      +PR +Q    +G  V+ ++ G  
Sbjct: 4206 VECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGL--QGKKVIAIATGSL 4263

Query: 334  HVVALDSSGYVYTWGKGYCGALGHG 358
            H V     G VYTWG    G LG G
Sbjct: 4264 HCVCCTEDGEVYTWGDNDEGQLGDG 4288



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 77/247 (31%), Positives = 125/247 (50%), Gaps = 12/247 (4%)

Query: 235  GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
            G ++  G N  GQLG   G  +  PTP +++A L  V    Q+  G   + AVT +G +Y
Sbjct: 3956 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALAALRPV----QLIGGEQTLFAVTADGKLY 4011

Query: 292  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 351
            + G G+   LG G       P  +++ +   I  V V++G +H +AL S G VY+WG+  
Sbjct: 4012 ATGYGAGGRLGIGGTESVSTPTLLESVQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAE 4071

Query: 352  CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 411
             G LGHG+      P  + SL+    V V A    +  +   G +Y +G   +G LG  D
Sbjct: 4072 DGKLGHGNRSPCDRPRVVESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD 4131

Query: 412  RGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG 469
               S+  L+P+++++L+ H V  I+  +G   T+ +TD   ++ +GD +  +LG     G
Sbjct: 4132 ---SEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDG 4188

Query: 470  CLEPTEI 476
            C  P +I
Sbjct: 4189 CKVPMKI 4195



 Score = 99.8 bits (247), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 78/242 (32%), Positives = 114/242 (47%), Gaps = 7/242 (2%)

Query: 119  GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
            GR+ T L  +  VFS G    G LGH      C     I       +  ++   +H+A +
Sbjct: 3058 GRHATALTVDGKVFSWGEGDDGKLGHF-SRMNCDKPRLIEALKTKRIRDIACGSSHSAAI 3116

Query: 179  LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN--FTGFLTIRGH 236
              SG+++T G       GH D N    +P++V+ L G    QV  G     T  LT  G 
Sbjct: 3117 TSSGELYTWGLGEYGRLGHGD-NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 3175

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 296
            V + G    G+LG G +     P++I  L   G V QI  G  + LA+T +GVV+++G G
Sbjct: 3176 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTWGKG 3234

Query: 297  SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 356
              F LGHG      +P+ ++  R  G  +V V+ G  H +A+  +G VY WG    G  G
Sbjct: 3235 DYFRLGHGSDVHVRKPQVVEGLR--GKKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQG 3292

Query: 357  HG 358
            +G
Sbjct: 3293 NG 3294



 Score = 98.6 bits (244), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 76/261 (29%), Positives = 122/261 (46%), Gaps = 19/261 (7%)

Query: 117 TTGRYHTLLISNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHVVQVS 169
           + G ++  L +   V+S G    G LGHG       P+     S  +    +  HVV ++
Sbjct: 503 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQ----AGKHVVHIA 558

Query: 170 ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
               ++A +   G+++T G  +    GH  +   +  P LV  LKG+    V  G     
Sbjct: 559 CGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEVI-PVLVAGLKGLKVIDVACGSGDAQ 617

Query: 230 FLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN 287
            L +   G V + G   +G+LG G +    TPK I  L+++  VV++  G  + +A+T +
Sbjct: 618 TLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL-DVVKVRCGSQFSIALTKD 676

Query: 288 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 347
           G VYS+G G N  LGHG +     P+ ++    +G  V+ V+AG  H +AL     V++W
Sbjct: 677 GQVYSWGKGDNQRLGHGTEEHVRYPKLLEGL--QGKKVIDVAAGSTHCLALTEDSEVHSW 734

Query: 348 GKGYCGALGHGDEIDKTLPEP 368
           G        H D +  T PEP
Sbjct: 735 GSN--DQCQHFDTLRVTKPEP 753



 Score = 74.7 bits (182), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 57/219 (26%), Positives = 101/219 (46%), Gaps = 21/219 (9%)

Query: 271 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 330
           V QIA      L ++ +G VY+    S          D L P+ +Q    + I  +   +
Sbjct: 454 VTQIACAEKRFLILSRSGRVYTQAYNS----------DALAPQLVQGLASRNIIKIAAHS 503

Query: 331 GDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLA----VQVCARKRK 386
              H +AL ++G VY+WG G  G LGHGD +    P+ +S+     A    V +      
Sbjct: 504 DGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTY 563

Query: 387 TFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVV 444
           +  +   G +Y +G   +G LG    G S+  + P ++  L+   V  ++  +G   T+ 
Sbjct: 564 SAAITAEGELYTWGRGNYGRLG---HGSSEDEVIPVLVAGLKGLKVIDVACGSGDAQTLA 620

Query: 445 VTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQEMEE 483
           VT+ G+++ +GD +  +LG     GC  P    I+++++
Sbjct: 621 VTENGQVWSWGDGDYGKLGRGGSDGCKTPK--LIEKLQD 657



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 50/167 (29%), Positives = 76/167 (45%), Gaps = 4/167 (2%)

Query: 118  TGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
            +G   TL L  + +V+S G    G LG G  +  C    +I+  +   VV+V      + 
Sbjct: 4156 SGDAQTLCLTDDDTVWSWGDGDYGKLGRG-GSDGCKVPMKIDSLTGLGVVKVECGSQFSV 4214

Query: 177  FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
             + +SG V+T G       GH   +  + RPR V+ L+G     +  G       T  G 
Sbjct: 4215 ALTKSGAVYTWGKGDYHRLGHGSDDH-VRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGE 4273

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
            V+T G N  GQLG G T     P+ +A L+    V ++A G ++ LA
Sbjct: 4274 VYTWGDNDEGQLGDGTTNAIQRPRLVAALQG-KKVNRVACGSAHTLA 4319



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 52/169 (30%), Positives = 76/169 (44%), Gaps = 8/169 (4%)

Query: 118 TGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
           +G   TL ++ N  V+S G    G LG G  +  C +   I       VV+V      + 
Sbjct: 613 SGDAQTLAVTENGQVWSWGDGDYGKLGRG-GSDGCKTPKLIEKLQDLDVVKVRCGSQFSI 671

Query: 177 FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
            + + GQV++ G   +   GH  T   +  P+L+E L+G     V AG      LT    
Sbjct: 672 ALTKDGQVYSWGKGDNQRLGH-GTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSE 730

Query: 237 VHTCGSNTHGQLGHGDTL--DRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
           VH+ GSN   Q  H DTL   +P P ++  L +   +V IA GP+   A
Sbjct: 731 VHSWGSNDQCQ--HFDTLRVTKPEPSALPGL-DTKHIVGIACGPAQSFA 776



 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 35/144 (24%), Positives = 70/144 (48%), Gaps = 5/144 (3%)

Query: 332  DEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 391
            D+  ++   SG +Y WG  + G LG  +     +P P  +L +   VQ+   ++  F + 
Sbjct: 3946 DDWTLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALAALRPVQLIGGEQTLFAVT 4005

Query: 392  DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRG 449
              G +Y     G+G+ G    G ++ V  P +L+S++   + +++  +G  H + ++  G
Sbjct: 4006 ADGKLYA---TGYGAGGRLGIGGTESVSTPTLLESVQHVFIKKVAVNSGGKHCLALSSEG 4062

Query: 450  RLFGFGDNERAQLGHDTLRGCLEP 473
             ++ +G+ E  +LGH     C  P
Sbjct: 4063 EVYSWGEAEDGKLGHGNRSPCDRP 4086



 Score = 44.7 bits (104), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 41/139 (29%), Positives = 65/139 (46%), Gaps = 12/139 (8%)

Query: 344  VYTWGKGYCGALG--HGDEID-KTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 400
            V+ WG      LG   G +I   +  E LS+L     VQV    +  F +   G VY  G
Sbjct: 2963 VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALN---VVQVAGGSKSLFAVTVEGKVYACG 3019

Query: 401  WMGFGSLGFPDRGVSD-KVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDN 457
                G LG    G+S   V  PR + +L ++ V +++  +G  H   +T  G++F +G+ 
Sbjct: 3020 EATNGRLGL---GLSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEG 3076

Query: 458  ERAQLGHDTLRGCLEPTEI 476
            +  +LGH +   C +P  I
Sbjct: 3077 DDGKLGHFSRMNCDKPRLI 3095


>gi|322795832|gb|EFZ18511.1| hypothetical protein SINV_14428 [Solenopsis invicta]
          Length = 786

 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 85/269 (31%), Positives = 136/269 (50%), Gaps = 6/269 (2%)

Query: 207 PRLVEALKGVPCKQV--TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP 264
           P L+E+++ V  K+V  ++G      L+  GHV++ G    G+LGHG+ +    PK I  
Sbjct: 3   PTLLESIQHVFIKKVAVSSGGKHCIALSSEGHVYSWGEGDDGKLGHGNKVSYDRPKLIED 62

Query: 265 LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH 324
           L  V  +V IA G  +  A+T  G +Y++G G    LGHG+  D+L+P+ ++  +   + 
Sbjct: 63  LLGV-EIVDIACGGHHSAAITSAGWLYTWGKGRYGRLGHGDSDDQLRPKVVEALQDYKVI 121

Query: 325 VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARK 384
            V   +GD   + +     V++WG G  G LG G      +P  + SL     V+V    
Sbjct: 122 DVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRGGSDGCKVPLKIDSLAGLGVVKVECGS 181

Query: 385 RKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV 444
           + +  L  +G+VY +G   +  LG    G  D V RPR + +L+   +  I+TG  H V 
Sbjct: 182 QFSVALTRSGAVYTWGKGDYHRLG---HGTDDHVRRPRKVAALQGKKIISIATGSLHCVA 238

Query: 445 VTDRGRLFGFGDNERAQLGHDTLRGCLEP 473
            +D+G +F +GDN+  QLG  T      P
Sbjct: 239 CSDKGEVFTWGDNDEGQLGDGTTSALHRP 267



 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 84/280 (30%), Positives = 137/280 (48%), Gaps = 9/280 (3%)

Query: 166 VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIF-RPRLVEALKGVPCKQVTAG 224
           V VS+   H   +   G V++ G+      GH   N+  + RP+L+E L GV    +  G
Sbjct: 17  VAVSSGGKHCIALSSEGHVYSWGEGDDGKLGH--GNKVSYDRPKLIEDLLGVEIVDIACG 74

Query: 225 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSV-VQIAAGPSYMLA 283
            + +  +T  G ++T G   +G+LGHGD+ D+  PK +  L++   + V   +G +  L 
Sbjct: 75  GHHSAAITSAGWLYTWGKGRYGRLGHGDSDDQLRPKVVEALQDYKVIDVACGSGDAQTLC 134

Query: 284 VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 343
           VT +  V+S+G G    LG G       P  I +    G+ VV+V  G +  VAL  SG 
Sbjct: 135 VTDDDNVWSWGDGDYGKLGRGGSDGCKVPLKIDSL--AGLGVVKVECGSQFSVALTRSGA 192

Query: 344 VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 403
           VYTWGKG    LGHG +     P  +++L+    + +           D G V+ +G   
Sbjct: 193 VYTWGKGDYHRLGHGTDDHVRRPRKVAALQGKKIISIATGSLHCVACSDKGEVFTWGDND 252

Query: 404 FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV 443
            G LG    G +  + RPR++ +L+   +++++ G  HT+
Sbjct: 253 EGQLG---DGTTSALHRPRLVHALQGKKITRVACGSAHTL 289



 Score = 95.5 bits (236), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 77/269 (28%), Positives = 127/269 (47%), Gaps = 20/269 (7%)

Query: 96  FLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSF 154
            L+S++H           + +++G  H + +S+   V+S G    G LGHG +    VS+
Sbjct: 5   LLESIQH------VFIKKVAVSSGGKHCIALSSEGHVYSWGEGDDGKLGHGNK----VSY 54

Query: 155 TR---INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVE 211
            R   I       +V ++   +H+A +  +G ++T G       GH D++  + RP++VE
Sbjct: 55  DRPKLIEDLLGVEIVDIACGGHHSAAITSAGWLYTWGKGRYGRLGHGDSDDQL-RPKVVE 113

Query: 212 ALKGVPCKQVTAGLNFTGFL--TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG 269
           AL+      V  G      L  T   +V + G   +G+LG G +     P  I  L  +G
Sbjct: 114 ALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRGGSDGCKVPLKIDSLAGLG 173

Query: 270 SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS 329
            VV++  G  + +A+T +G VY++G G    LGHG      +PR +     +G  ++ ++
Sbjct: 174 -VVKVECGSQFSVALTRSGAVYTWGKGDYHRLGHGTDDHVRRPRKVAAL--QGKKIISIA 230

Query: 330 AGDEHVVALDSSGYVYTWGKGYCGALGHG 358
            G  H VA    G V+TWG    G LG G
Sbjct: 231 TGSLHCVACSDKGEVFTWGDNDEGQLGDG 259


>gi|302796691|ref|XP_002980107.1| hypothetical protein SELMODRAFT_112120 [Selaginella moellendorffii]
 gi|300152334|gb|EFJ18977.1| hypothetical protein SELMODRAFT_112120 [Selaginella moellendorffii]
          Length = 1090

 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 103/333 (30%), Positives = 159/333 (47%), Gaps = 23/333 (6%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V  ++    HAA V + G+VF  GD S    GH   +  +  P+LVEAL     + V  G
Sbjct: 309 VHHIACGNRHAALVTKQGEVFCWGDESGGRLGH-GVDVDVAHPKLVEALATTNTEFVACG 367

Query: 225 LNFTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSI-APLEEVGSVVQIAAGPSYM 281
              +  +T+ G + T G  TH  G LGHG+ +   TPK +  PLE +  V  +A G  + 
Sbjct: 368 EYHSCAVTLSGDLFTWGDGTHSYGLLGHGNDISHWTPKRVGGPLEGI-RVSSVACGVWHT 426

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL--- 338
             VT  G +++FG G+   LGHG++     P+ +++   KG+  VRV+ G  H  A+   
Sbjct: 427 ALVTSAGQLFTFGDGTFGVLGHGDKRSVALPKEVESL--KGLKTVRVACGVWHTAAVVEV 484

Query: 339 --------DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVL 390
                    SSG ++TWG G  G LGHGD+  K +P  +++L  +   QV      T  L
Sbjct: 485 MVGYSNAGGSSGKLFTWGDGDKGRLGHGDKEQKLVPTCVAALVDYNFKQVACGHTLTVAL 544

Query: 391 VDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGR 450
              G V+  G   +G LG      +D  L   +   L    V +I+ G YH  V+T +  
Sbjct: 545 TINGRVFTMGSSLYGQLG---DVRADGKLPGLVEGRLWEAFVEEIACGAYHVAVLTAKTE 601

Query: 451 LFGFGDNERAQLGHDTLRGCLEPTEIFIQEMEE 483
           ++ +G     +LGH  +     PT   ++ ++E
Sbjct: 602 VYTWGKGANGRLGHGDVMDRNTPT--LVEALKE 632



 Score =  102 bits (254), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 85/277 (30%), Positives = 129/277 (46%), Gaps = 28/277 (10%)

Query: 116 ITTGRYHTLLISNSS---VFSCGSSLCGVLGHGPETTQCVSFTRINFP-SAAHVVQVSAS 171
           +  G YH+  ++ S     +  G+   G+LGHG + +      R+  P     V  V+  
Sbjct: 364 VACGEYHSCAVTLSGDLFTWGDGTHSYGLLGHGNDISHWTP-KRVGGPLEGIRVSSVACG 422

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
             H A V  +GQ+FT GD +    GH D  R +  P+ VE+LKG+   +V  G+  T  +
Sbjct: 423 VWHTALVTSAGQLFTFGDGTFGVLGHGD-KRSVALPKEVESLKGLKTVRVACGVWHTAAV 481

Query: 232 T-----------IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 280
                         G + T G    G+LGHGD   +  P  +A L +  +  Q+A G + 
Sbjct: 482 VEVMVGYSNAGGSSGKLFTWGDGDKGRLGHGDKEQKLVPTCVAALVDY-NFKQVACGHTL 540

Query: 281 MLAVTGNGVVYSFGSGSNFCLGH----GEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVV 336
            +A+T NG V++ GS     LG     G+    ++ R  + F      V  ++ G  HV 
Sbjct: 541 TVALTINGRVFTMGSSLYGQLGDVRADGKLPGLVEGRLWEAF------VEEIACGAYHVA 594

Query: 337 ALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
            L +   VYTWGKG  G LGHGD +D+  P  + +LK
Sbjct: 595 VLTAKTEVYTWGKGANGRLGHGDVMDRNTPTLVEALK 631



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 82/294 (27%), Positives = 138/294 (46%), Gaps = 24/294 (8%)

Query: 207 PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 266
           P+ +E+   +    +  G      +T +G V   G  + G+LGHG  +D   PK +  L 
Sbjct: 298 PKALESAVVLDVHHIACGNRHAALVTKQGEVFCWGDESGGRLGHGVDVDVAHPKLVEALA 357

Query: 267 EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNF--CLGHGEQHDELQPRAIQTFRRKGIH 324
              +   +A G  +  AVT +G ++++G G++    LGHG       P+ +     +GI 
Sbjct: 358 TTNTEF-VACGEYHSCAVTLSGDLFTWGDGTHSYGLLGHGNDISHWTPKRVGG-PLEGIR 415

Query: 325 VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARK 384
           V  V+ G  H   + S+G ++T+G G  G LGHGD+    LP+ + SLK    V+V    
Sbjct: 416 VSSVACGVWHTALVTSAGQLFTFGDGTFGVLGHGDKRSVALPKEVESLKGLKTVRVACGV 475

Query: 385 RKTFVLVD-----------TGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVS 433
             T  +V+           +G ++ +G    G LG  D+   ++ L P  + +L  ++  
Sbjct: 476 WHTAAVVEVMVGYSNAGGSSGKLFTWGDGDKGRLGHGDK---EQKLVPTCVAALVDYNFK 532

Query: 434 QISTGLYHTVVVTDRGRLFGFGDNERAQLG----HDTLRGCLEPT--EIFIQEM 481
           Q++ G   TV +T  GR+F  G +   QLG       L G +E    E F++E+
Sbjct: 533 QVACGHTLTVALTINGRVFTMGSSLYGQLGDVRADGKLPGLVEGRLWEAFVEEI 586



 Score = 81.6 bits (200), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 68/228 (29%), Positives = 104/228 (45%), Gaps = 15/228 (6%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           +  G +HT L++++  +F+ G    GVLGHG + +  +    +        V+V+    H
Sbjct: 419 VACGVWHTALVTSAGQLFTFGDGTFGVLGHGDKRSVALP-KEVESLKGLKTVRVACGVWH 477

Query: 175 AAFVLQ-----------SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTA 223
            A V++           SG++FT GD      GH D  + +  P  V AL     KQV  
Sbjct: 478 TAAVVEVMVGYSNAGGSSGKLFTWGDGDKGRLGHGDKEQKLV-PTCVAALVDYNFKQVAC 536

Query: 224 GLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
           G   T  LTI G V T GS+ +GQLG     D   P  +        V +IA G  ++  
Sbjct: 537 GHTLTVALTINGRVFTMGSSLYGQLGDVRA-DGKLPGLVEGRLWEAFVEEIACGAYHVAV 595

Query: 284 VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG 331
           +T    VY++G G+N  LGHG+  D   P  ++  + K +  V   +G
Sbjct: 596 LTAKTEVYTWGKGANGRLGHGDVMDRNTPTLVEALKEKQVKSVACGSG 643



 Score = 66.2 bits (160), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 53/186 (28%), Positives = 85/186 (45%), Gaps = 9/186 (4%)

Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 351
           S GSG       G + D L P+A+++     +H   ++ G+ H   +   G V+ WG   
Sbjct: 283 SVGSGDG-----GIKTDSLLPKALESAVVLDVH--HIACGNRHAALVTKQGEVFCWGDES 335

Query: 352 CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 411
            G LGHG ++D   P+ + +L +     V   +  +  +  +G ++ +G  G  S G   
Sbjct: 336 GGRLGHGVDVDVAHPKLVEALATTNTEFVACGEYHSCAVTLSGDLFTWG-DGTHSYGLLG 394

Query: 412 RGVSDKVLRP-RILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGC 470
            G       P R+   L    VS ++ G++HT +VT  G+LF FGD     LGH   R  
Sbjct: 395 HGNDISHWTPKRVGGPLEGIRVSSVACGVWHTALVTSAGQLFTFGDGTFGVLGHGDKRSV 454

Query: 471 LEPTEI 476
             P E+
Sbjct: 455 ALPKEV 460



 Score = 38.9 bits (89), Expect = 6.5,   Method: Compositional matrix adjust.
 Identities = 23/73 (31%), Positives = 36/73 (49%)

Query: 392 DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRL 451
           + G   G  ++   S+G  D G+    L P+ L+S     V  I+ G  H  +VT +G +
Sbjct: 269 EEGDALGDVFLWGESVGSGDGGIKTDSLLPKALESAVVLDVHHIACGNRHAALVTKQGEV 328

Query: 452 FGFGDNERAQLGH 464
           F +GD    +LGH
Sbjct: 329 FCWGDESGGRLGH 341


>gi|32451488|ref|NP_080377.2| probable E3 ubiquitin-protein ligase HERC4 isoform 2 [Mus musculus]
 gi|29144941|gb|AAH43082.1| Hect domain and RLD 4 [Mus musculus]
 gi|74188723|dbj|BAE28095.1| unnamed protein product [Mus musculus]
 gi|148700106|gb|EDL32053.1| hect domain and RLD 4, isoform CRA_c [Mus musculus]
          Length = 1049

 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 91/276 (32%), Positives = 142/276 (51%), Gaps = 10/276 (3%)

Query: 204 IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 263
           +  PR  +       + V  GL  T F+   G V+TCG N  GQLGH  +  R  P+ + 
Sbjct: 22  VLEPRRSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKS--RKKPEQVV 79

Query: 264 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLG-HGEQHDELQPRAIQTFRRKG 322
            L+   ++V +A G ++ LA+   G VY++G  S+  LG  G +     PR I++     
Sbjct: 80  ALD-AQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSL--SD 136

Query: 323 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK-TLPEPLSSLKSHLAVQVC 381
           I +V+V+ G  H +AL  +  V+ WG+   G LG G +  K T P+ + SL     +QV 
Sbjct: 137 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCQKQTSPQLIKSLLGIPFMQVA 196

Query: 382 ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYH 441
           A    +FVL  +G+++G+G   FG LG  D   +D+ + P +L SLR+  +  I  G  H
Sbjct: 197 AGGAHSFVLTLSGAIFGWGRNKFGQLGLNDE--NDRYV-PNLLKSLRSQKIVYICCGEDH 253

Query: 442 TVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF 477
           T  +T  G +F FG     QLGH++    + P ++F
Sbjct: 254 TAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVF 289



 Score =  125 bits (315), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 144/311 (46%), Gaps = 12/311 (3%)

Query: 156 RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 215
           R +F     V  V     H  FVL  G V+TCG N     GH  + +   +P  V AL  
Sbjct: 27  RSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRK---KPEQVVALDA 83

Query: 216 VPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLG-HGDTLDRPTPKSIAPLEEVGSVVQI 274
                V  G   T  L  +G V+  G ++ GQLG  G       P++I  L ++  +VQ+
Sbjct: 84  QNIVAVACGEAHTLALNDKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSLSDI-QIVQV 142

Query: 275 AAGPSYMLAVTGNGVVYSFGSGSNFCLGHG-EQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           A G  + LA++    V+ +G      LG G +   +  P+ I++    GI  ++V+AG  
Sbjct: 143 ACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCQKQTSPQLIKSLL--GIPFMQVAAGGA 200

Query: 334 HVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDT 393
           H   L  SG ++ WG+   G LG  DE D+ +P  L SL+S   V +C  +  T  L   
Sbjct: 201 HSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKE 260

Query: 394 GSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHT-VVVTDRGRLF 452
           G V+ FG  G+G LG      +   + PR +  L    V+Q++ G  HT   V   GR++
Sbjct: 261 GGVFTFGAGGYGQLG---HNSTSHEINPRKVFELMGSIVTQVACGRQHTSAFVPSSGRIY 317

Query: 453 GFGDNERAQLG 463
            FG     QLG
Sbjct: 318 SFGLGGNGQLG 328



 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 80/291 (27%), Positives = 139/291 (47%), Gaps = 8/291 (2%)

Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 179
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V V+  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVACGEAHTLALN 100

Query: 180 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 239
             GQV+  G +S    G + +   I  PR +++L  +   QV  G   +  L+    V  
Sbjct: 101 DKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFC 160

Query: 240 CGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
            G N +GQLG G D   + +P+ I  L  +   +Q+AAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKYGQLGLGIDCQKQTSPQLIKSLLGI-PFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 299 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 358
             LG  +++D   P  +++ R + I  V +  G++H  AL   G V+T+G G  G LGH 
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRSQKI--VYICCGEDHTAALTKEGGVFTFGAGGYGQLGHN 277

Query: 359 DEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLG 408
               +  P  +  L   +  QV C R+  +  +  +G +Y FG  G G LG
Sbjct: 278 STSHEINPRKVFELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  102 bits (253), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 85/274 (31%), Positives = 131/274 (47%), Gaps = 10/274 (3%)

Query: 98  QSVEHSSDIVETSAGNM-QITTGRYHTLLISNS-SVFSCGSSLCGVLG-HGPETTQCVSF 154
           +S +    +V   A N+  +  G  HTL +++   V++ G    G LG  G E  +C+  
Sbjct: 70  KSRKKPEQVVALDAQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQLGLQGSE--ECIRV 127

Query: 155 TR-INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEAL 213
            R I   S   +VQV+    H+  + ++ +VF  G N     G     +    P+L+++L
Sbjct: 128 PRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCQKQTSPQLIKSL 187

Query: 214 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
            G+P  QV AG   +  LT+ G +   G N  GQLG  D  DR  P  +  L     +V 
Sbjct: 188 LGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRS-QKIVY 246

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           I  G  +  A+T  G V++FG+G    LGH     E+ PR +  F   G  V +V+ G +
Sbjct: 247 ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQVACGRQ 304

Query: 334 HVVA-LDSSGYVYTWGKGYCGALGHGDEIDKTLP 366
           H  A + SSG +Y++G G  G LG G   ++  P
Sbjct: 305 HTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338



 Score = 79.7 bits (195), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 66/206 (32%), Positives = 99/206 (48%), Gaps = 6/206 (2%)

Query: 114 MQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +Q+  G YH+L +S +S VF  G +  G LG G +  +  S   I        +QV+A  
Sbjct: 140 VQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCQKQTSPQLIKSLLGIPFMQVAAGG 199

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            H+  +  SG +F  G N     G  D N   + P L+++L+      +  G + T  LT
Sbjct: 200 AHSFVLTLSGAIFGWGRNKFGQLGLNDENDR-YVPNLLKSLRSQKIVYICCGEDHTAALT 258

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVV 290
             G V T G+  +GQLGH  T     P+ +   E +GS+V Q+A G  +  A V  +G +
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQVACGRQHTSAFVPSSGRI 316

Query: 291 YSFGSGSNFCLGHGEQHDELQPRAIQ 316
           YSFG G N  LG G   +   P  ++
Sbjct: 317 YSFGLGGNGQLGTGSTSNRKSPFTVK 342


>gi|334346980|ref|XP_001366466.2| PREDICTED: e3 ubiquitin-protein ligase HERC2 [Monodelphis domestica]
          Length = 4706

 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 96/328 (29%), Positives = 158/328 (48%), Gaps = 16/328 (4%)

Query: 161  SAAHVVQVSASENHAAFVLQSGQVFTCGD--NSSFCCGHRDTNRPIFRPRLVEALKGVPC 218
            SA +VVQV+        V   G+V+ CG+  N     G      PI  PR + AL     
Sbjct: 2991 SALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPI--PRQITALSNYVV 3048

Query: 219  KQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA 276
            K+V   +G      LT+ G V + G    G+LGH   ++   P+ I  L+    +  IA 
Sbjct: 3049 KKVAVHSGGRHAMALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALK-TKRIRDIAC 3107

Query: 277  GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEH 334
            G S+  A+T +G +Y++G G    LGHG+   +L+P+ ++     G  V++V+ G  D  
Sbjct: 3108 GSSHSAAITSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLL--GHRVIQVACGSRDAQ 3165

Query: 335  VVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 394
             +AL   G V++WG G  G LG G      +P+ +  L      Q+    + +  L  +G
Sbjct: 3166 TLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSG 3225

Query: 395  SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 454
             V+ +G   +  LG    G    V +P++++ LR   +  ++ G  H + VTD G+++ +
Sbjct: 3226 VVWTWGKGDYFRLG---HGTDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDTGQVYAW 3282

Query: 455  GDNERAQLGHDTLRGCLEPTEIFIQEME 482
            GDN+  Q G+ T     +PT   +Q +E
Sbjct: 3283 GDNDHGQQGNGTTTVNRKPT--LVQGLE 3308



 Score =  127 bits (318), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 93/288 (32%), Positives = 142/288 (49%), Gaps = 10/288 (3%)

Query: 183  QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 242
            +VF  G N     G    ++ I  P   E L  +   QV  G      +T+ G V+ CG 
Sbjct: 2961 KVFVWGLNDKDQLGGLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGE 3019

Query: 243  NTHGQLGHG-DTLDRPTPKSIAPLEE-VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 300
             T+G+LG G  +   P P+ I  L   V   V + +G  + +A+T +G V+S+G G +  
Sbjct: 3020 ATNGRLGLGISSGTVPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKVFSWGEGDDGK 3079

Query: 301  LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 360
            LGH  + +  +PR I+  + K I    ++ G  H  A+ SSG +YTWG G  G LGHGD 
Sbjct: 3080 LGHFSRMNCDKPRLIEALKTKRIR--DIACGSSHSAAITSSGELYTWGLGEYGRLGHGDN 3137

Query: 361  IDKTLPEPLSSLKSHLAVQVC--ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKV 418
              +  P+ +  L  H  +QV   +R  +T  L D G V+ +G   FG LG   RG S+  
Sbjct: 3138 TTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLG---RGGSEGC 3194

Query: 419  LRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDT 466
              P+ ++ L    V QI  G   ++ +T  G ++ +G  +  +LGH T
Sbjct: 3195 NIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGT 3242



 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 91/311 (29%), Positives = 150/311 (48%), Gaps = 24/311 (7%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           + Q++ +E     + ++G+V+    NS       DT      P+LV+ L      ++ A 
Sbjct: 454 ITQIACAEKRFLILSRNGRVYMQAYNS-------DT----LGPQLVQGLASRNIVKIAAH 502

Query: 225 LNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGS-VVQIAAGPS 279
            +   +L +   G V + G    G+LGHGDT+    PK I+ L  ++ G  VV IA G +
Sbjct: 503 SDGHHYLALAATGEVFSWGCGDGGRLGHGDTVPLEEPKMISALSGKQAGKHVVHIACGST 562

Query: 280 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS--AGDEHVVA 337
           Y  A+T  G +Y++G G+   LGHG   D+  P  +     KG+ V+ VS  +GD   +A
Sbjct: 563 YSAAITAEGELYTWGRGNYGRLGHGSSEDQTIPMLVTGL--KGLKVIDVSCGSGDAQTLA 620

Query: 338 LDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVY 397
           +  +G V++WG G  G LG G       P+ +  L+    V+V    + +  L   G VY
Sbjct: 621 VTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSVALTKDGQVY 680

Query: 398 GFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDN 457
            +G      LG    G  + V  P++L+ L+   V  ++ G  H + +T+   +  +G N
Sbjct: 681 SWGKGDNQRLG---HGTEEHVRYPKLLEGLQGKKVVDVAAGSTHCLALTEDSEVHSWGSN 737

Query: 458 ERAQLGHDTLR 468
           ++ Q   DTLR
Sbjct: 738 DQCQ-HFDTLR 747



 Score = 99.4 bits (246), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 82/275 (29%), Positives = 130/275 (47%), Gaps = 23/275 (8%)

Query: 103 SSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHG-------PETTQCVSFT 155
           S +IV+ +A     + G ++  L +   VFS G    G LGHG       P+    +S  
Sbjct: 493 SRNIVKIAAH----SDGHHYLALAATGEVFSWGCGDGGRLGHGDTVPLEEPKMISALSGK 548

Query: 156 RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 215
           +    +  HVV ++    ++A +   G+++T G  +    GH  +      P LV  LKG
Sbjct: 549 Q----AGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDQTI-PMLVTGLKG 603

Query: 216 VPCKQVTAGLNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
           +    V+ G      L +   G V + G   +G+LG G +    TPK I  L+++  VV+
Sbjct: 604 LKVIDVSCGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL-DVVK 662

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           +  G  + +A+T +G VYS+G G N  LGHG +     P+ ++    +G  VV V+AG  
Sbjct: 663 VRCGSQFSVALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGL--QGKKVVDVAAGST 720

Query: 334 HVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEP 368
           H +AL     V++WG        H D +  T PEP
Sbjct: 721 HCLALTEDSEVHSWGSN--DQCQHFDTLRITKPEP 753



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 77/242 (31%), Positives = 113/242 (46%), Gaps = 7/242 (2%)

Query: 119  GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
            GR+   L  +  VFS G    G LGH      C     I       +  ++   +H+A +
Sbjct: 3057 GRHAMALTVDGKVFSWGEGDDGKLGHF-SRMNCDKPRLIEALKTKRIRDIACGSSHSAAI 3115

Query: 179  LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN--FTGFLTIRGH 236
              SG+++T G       GH D N    +P++V+ L G    QV  G     T  LT  G 
Sbjct: 3116 TSSGELYTWGLGEYGRLGHGD-NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 3174

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 296
            V + G    G+LG G +     P++I  L   G V QI  G  + LA+T +GVV+++G G
Sbjct: 3175 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTWGKG 3233

Query: 297  SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 356
              F LGHG      +P+ ++  R  G  +V V+ G  H +A+  +G VY WG    G  G
Sbjct: 3234 DYFRLGHGTDVHVRKPQVVEGLR--GKKIVHVAVGALHCLAVTDTGQVYAWGDNDHGQQG 3291

Query: 357  HG 358
            +G
Sbjct: 3292 NG 3293



 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 66/237 (27%), Positives = 105/237 (44%), Gaps = 33/237 (13%)

Query: 235  GHVHTCGSNTHGQLG--HGDTLDRPTP----KSIAPLEEVG------------------- 269
            G ++  G N  GQLG   G  +  PTP     ++ P++ +G                   
Sbjct: 3955 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALAALRPIQLIGGEQTLFAVTADGKVEALQG 4014

Query: 270  -SVVQIA--AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVV 326
              V+ IA  +G +  L +T +  V+S+G G    LG G       P  I +    G+ VV
Sbjct: 4015 YRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL--TGLGVV 4072

Query: 327  RVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRK 386
            +V  G +  VAL  SG VYTWGKG    LGHG +     P  +  L+    + +      
Sbjct: 4073 KVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLH 4132

Query: 387  TFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV 443
                 + G VY +G    G LG    G ++ + RPR++ +L+   +++++ G  HT+
Sbjct: 4133 CVCCTEDGEVYTWGDNDEGQLG---DGTTNAIQRPRLVAALQGKKINRVACGSAHTL 4186



 Score = 75.5 bits (184), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 58/219 (26%), Positives = 100/219 (45%), Gaps = 21/219 (9%)

Query: 271 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 330
           + QIA      L ++ NG VY     S          D L P+ +Q    + I  +   +
Sbjct: 454 ITQIACAEKRFLILSRNGRVYMQAYNS----------DTLGPQLVQGLASRNIVKIAAHS 503

Query: 331 GDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLA----VQVCARKRK 386
              H +AL ++G V++WG G  G LGHGD +    P+ +S+L    A    V +      
Sbjct: 504 DGHHYLALAATGEVFSWGCGDGGRLGHGDTVPLEEPKMISALSGKQAGKHVVHIACGSTY 563

Query: 387 TFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVV 444
           +  +   G +Y +G   +G LG    G S+    P ++  L+   V  +S  +G   T+ 
Sbjct: 564 SAAITAEGELYTWGRGNYGRLG---HGSSEDQTIPMLVTGLKGLKVIDVSCGSGDAQTLA 620

Query: 445 VTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQEMEE 483
           VT+ G+++ +GD +  +LG     GC  P    I+++++
Sbjct: 621 VTENGQVWSWGDGDYGKLGRGGSDGCKTPK--LIEKLQD 657



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 66/225 (29%), Positives = 100/225 (44%), Gaps = 8/225 (3%)

Query: 116  ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
            I  G  H+  I++S  +++ G    G LGHG  TTQ +    +       V+QV+     
Sbjct: 3105 IACGSSHSAAITSSGELYTWGLGEYGRLGHGDNTTQ-LKPKMVKVLLGHRVIQVACGSRD 3163

Query: 175  AA--FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            A    +   G VF+ GD      G R  +     P+ +E L G    Q+  G  F+  LT
Sbjct: 3164 AQTLALTDEGLVFSWGDGDFGKLG-RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALT 3222

Query: 233  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
              G V T G   + +LGHG  +    P+ +  L     +V +A G  + LAVT  G VY+
Sbjct: 3223 KSGVVWTWGKGDYFRLGHGTDVHVRKPQVVEGLRG-KKIVHVAVGALHCLAVTDTGQVYA 3281

Query: 293  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
            +G   +   G+G      +P  +Q    +G  + RV+ G  H VA
Sbjct: 3282 WGDNDHGQQGNGTTTVNRKPTLVQGL--EGQKITRVACGSSHSVA 3324



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 49/167 (29%), Positives = 76/167 (45%), Gaps = 4/167 (2%)

Query: 118  TGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
            +G   TL L  + +V+S G    G LG G  +  C    +I+  +   VV+V      + 
Sbjct: 4024 SGDAQTLCLTDDDTVWSWGDGDYGKLGRG-GSDGCKVPMKIDSLTGLGVVKVECGSQFSV 4082

Query: 177  FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
             + +SG V+T G       GH   +  + RPR V+ L+G     +  G       T  G 
Sbjct: 4083 ALTKSGAVYTWGKGDYHRLGHGSDDH-VRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGE 4141

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
            V+T G N  GQLG G T     P+ +A L+    + ++A G ++ LA
Sbjct: 4142 VYTWGDNDEGQLGDGTTNAIQRPRLVAALQG-KKINRVACGSAHTLA 4187



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 52/169 (30%), Positives = 76/169 (44%), Gaps = 8/169 (4%)

Query: 118 TGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
           +G   TL ++ N  V+S G    G LG G  +  C +   I       VV+V      + 
Sbjct: 613 SGDAQTLAVTENGQVWSWGDGDYGKLGRG-GSDGCKTPKLIEKLQDLDVVKVRCGSQFSV 671

Query: 177 FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
            + + GQV++ G   +   GH  T   +  P+L+E L+G     V AG      LT    
Sbjct: 672 ALTKDGQVYSWGKGDNQRLGH-GTEEHVRYPKLLEGLQGKKVVDVAAGSTHCLALTEDSE 730

Query: 237 VHTCGSNTHGQLGHGDTL--DRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
           VH+ GSN   Q  H DTL   +P P ++  L +   +V IA GP+   A
Sbjct: 731 VHSWGSNDQCQ--HFDTLRITKPEPTALPGL-DTKHIVGIACGPAQSFA 776



 Score = 44.7 bits (104), Expect = 0.098,   Method: Compositional matrix adjust.
 Identities = 41/139 (29%), Positives = 65/139 (46%), Gaps = 12/139 (8%)

Query: 344  VYTWGKGYCGALG--HGDEID-KTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 400
            V+ WG      LG   G +I   +  E LS+L     VQV    +  F +   G VY  G
Sbjct: 2962 VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALN---VVQVAGGSKSLFAVTVEGKVYACG 3018

Query: 401  WMGFGSLGFPDRGVSD-KVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDN 457
                G LG    G+S   V  PR + +L  + V +++  +G  H + +T  G++F +G+ 
Sbjct: 3019 EATNGRLGL---GISSGTVPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKVFSWGEG 3075

Query: 458  ERAQLGHDTLRGCLEPTEI 476
            +  +LGH +   C +P  I
Sbjct: 3076 DDGKLGHFSRMNCDKPRLI 3094


>gi|326913714|ref|XP_003203179.1| PREDICTED: e3 ubiquitin-protein ligase HERC2-like [Meleagris
            gallopavo]
          Length = 4815

 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 95/328 (28%), Positives = 158/328 (48%), Gaps = 16/328 (4%)

Query: 161  SAAHVVQVSASENHAAFVLQSGQVFTCGD--NSSFCCGHRDTNRPIFRPRLVEALKGVPC 218
            SA +VVQV+        V   G+V+ CG+  N     G      PI  PR + AL     
Sbjct: 2970 SALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPI--PRQITALSNYVV 3027

Query: 219  KQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA 276
            K+V   +G      LT+ G + + G    G+LGH   ++   P+ I  L+    +  IA 
Sbjct: 3028 KKVAVHSGGRHAMALTVDGKIFSWGEGDDGKLGHFSRMNCDKPRLIEALK-TKRIRDIAC 3086

Query: 277  GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEH 334
            G S+  A+T +G +Y++G G    LGHG+   +L+P+ ++     G  V++V+ G  D  
Sbjct: 3087 GSSHSAAITSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLL--GHRVIQVACGSRDAQ 3144

Query: 335  VVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 394
             +AL   G V++WG G  G LG G      +P+ +  L      Q+    + +  L  +G
Sbjct: 3145 TLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSG 3204

Query: 395  SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 454
             V+ +G   +  LG    G    V +P++++ LR   +  ++ G  H + VTD G+++ +
Sbjct: 3205 VVWTWGKGDYFRLG---HGTDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDTGQVYAW 3261

Query: 455  GDNERAQLGHDTLRGCLEPTEIFIQEME 482
            GDN+  Q G+ T     +PT   +Q +E
Sbjct: 3262 GDNDHGQQGNGTTTVNRKPT--LVQGLE 3287



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 92/288 (31%), Positives = 142/288 (49%), Gaps = 10/288 (3%)

Query: 183  QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 242
            +VF  G N     G    ++ I  P   E L  +   QV  G      +T+ G V+ CG 
Sbjct: 2940 KVFVWGLNDKDQLGGLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGE 2998

Query: 243  NTHGQLGHG-DTLDRPTPKSIAPLEE-VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 300
             T+G+LG G  +   P P+ I  L   V   V + +G  + +A+T +G ++S+G G +  
Sbjct: 2999 ATNGRLGLGISSGTVPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKIFSWGEGDDGK 3058

Query: 301  LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 360
            LGH  + +  +PR I+  + K I    ++ G  H  A+ SSG +YTWG G  G LGHGD 
Sbjct: 3059 LGHFSRMNCDKPRLIEALKTKRIR--DIACGSSHSAAITSSGELYTWGLGEYGRLGHGDN 3116

Query: 361  IDKTLPEPLSSLKSHLAVQVC--ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKV 418
              +  P+ +  L  H  +QV   +R  +T  L D G V+ +G   FG LG   RG S+  
Sbjct: 3117 TTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLG---RGGSEGC 3173

Query: 419  LRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDT 466
              P+ ++ L    V QI  G   ++ +T  G ++ +G  +  +LGH T
Sbjct: 3174 NIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGT 3221



 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 108/404 (26%), Positives = 181/404 (44%), Gaps = 24/404 (5%)

Query: 74   MSRNVQIELLNRCNGNWKRVL--RFLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSV 131
            M+ N  +++L+ C+  +KR    + +Q +    D    SAG               + ++
Sbjct: 3890 MADNEHMDVLHECHDVFKREQDEQLVQWMNRRPDDWTLSAGG--------------SGTI 3935

Query: 132  FSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNS 191
            +  G +  G LG G E  +    T     +    VQ+   E     V   G+++  G  +
Sbjct: 3936 YGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGYGA 3994

Query: 192  SFCCGHRDTNRPIFRPRLVEALKGVPCKQV--TAGLNFTGFLTIRGHVHTCGSNTHGQLG 249
                G   T   +  P L+E+++ V  K+V   +G      L+  G V++ G    G+LG
Sbjct: 3995 GGRLGIGGTES-VSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLG 4053

Query: 250  HGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDE 309
            HG+      P+ I  L  +  VV IAAG ++   +T  G ++++G G    LGHG+  D+
Sbjct: 4054 HGNRSPCDRPRVIESLRGI-EVVDIAAGGAHSACITAAGDLFTWGKGRYGRLGHGDSEDQ 4112

Query: 310  LQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPL 369
            L+P+ ++  +   +  +   +GD   + L     V++WG G  G LG G      +P  +
Sbjct: 4113 LKPKLVEALQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKI 4172

Query: 370  SSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRA 429
             SL     V+V    + +  L  +G+VY +G   +  LG    G  D V RPR +  L+ 
Sbjct: 4173 DSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLG---HGSDDHVRRPRQVQGLQG 4229

Query: 430  HHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEP 473
              V  I+TG  H V  T+ G ++ +GDN+  QLG  T      P
Sbjct: 4230 KKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRP 4273



 Score =  122 bits (307), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 84/280 (30%), Positives = 139/280 (49%), Gaps = 9/280 (3%)

Query: 166  VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 225
            V V++   H   +   G+V++ G+      GH + + P  RPR++E+L+G+    + AG 
Sbjct: 4023 VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRS-PCDRPRVIESLRGIEVVDIAAGG 4081

Query: 226  NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA--AGPSYMLA 283
              +  +T  G + T G   +G+LGHGD+ D+  PK +  L+    V+ IA  +G +  L 
Sbjct: 4082 AHSACITAAGDLFTWGKGRYGRLGHGDSEDQLKPKLVEALQGY-RVIDIACGSGDAQTLC 4140

Query: 284  VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 343
            +T +  V+S+G G    LG G       P  I +    G+ VV+V  G +  VAL  SG 
Sbjct: 4141 LTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL--TGLGVVKVECGSQFSVALTKSGA 4198

Query: 344  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 403
            VYTWGKG    LGHG +     P  +  L+    + +           + G VY +G   
Sbjct: 4199 VYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDND 4258

Query: 404  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV 443
             G LG    G ++ + RPR++ +L+   +++++ G  HT+
Sbjct: 4259 EGQLG---DGTTNAIQRPRLVAALQGKKINRVACGSAHTL 4295



 Score =  119 bits (297), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 94/311 (30%), Positives = 153/311 (49%), Gaps = 24/311 (7%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           VVQ++ +E     + ++G+V+T   NS       DT      P+LV++L      ++ A 
Sbjct: 430 VVQIACAEKRFLILSRNGRVYTQAYNS-------DT----LGPQLVQSLASRNIVKIAAH 478

Query: 225 LNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGS-VVQIAAGPS 279
            +   +L +   G V + G    G+LGHGDT+    PK I+ L  ++ G  VV IA G +
Sbjct: 479 SDGHHYLALSANGEVFSWGCGDGGRLGHGDTVPLEEPKLISALSGKQAGKHVVHIACGST 538

Query: 280 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS--AGDEHVVA 337
           Y  A+T  G +Y++G G+   LGHG   D+  P  +     KG+ V+ VS  +GD   +A
Sbjct: 539 YSAAITAEGELYTWGRGNYGRLGHGSSEDQTIPMLVTGL--KGLKVIDVSCGSGDAQTLA 596

Query: 338 LDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVY 397
           +  +G V++WG G  G LG G       P+ +  L+    V+V    + +  L   G VY
Sbjct: 597 VTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDIVKVRCGSQFSIALTKDGQVY 656

Query: 398 GFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDN 457
            +G      LG    G  + V  P++L+ L+   V  ++ G  H + +T+   +  +G N
Sbjct: 657 TWGKGDNQRLG---HGTEEHVRYPKLLEGLKGKKVIDVAAGSTHCLALTEDSEVHSWGSN 713

Query: 458 ERAQLGHDTLR 468
           ++ Q   DTLR
Sbjct: 714 DQCQ-HFDTLR 723



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 83/283 (29%), Positives = 136/283 (48%), Gaps = 24/283 (8%)

Query: 95  RFLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHG-------PE 147
           + +QS+  S +IV+ +A     + G ++  L +N  VFS G    G LGHG       P+
Sbjct: 462 QLVQSLA-SRNIVKIAAH----SDGHHYLALSANGEVFSWGCGDGGRLGHGDTVPLEEPK 516

Query: 148 TTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRP 207
               +S  +    +  HVV ++    ++A +   G+++T G  +    GH  +      P
Sbjct: 517 LISALSGKQ----AGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDQTI-P 571

Query: 208 RLVEALKGVPCKQVTAGLNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL 265
            LV  LKG+    V+ G      L +   G V + G   +G+LG G +    TPK I  L
Sbjct: 572 MLVTGLKGLKVIDVSCGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKL 631

Query: 266 EEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHV 325
           +++  +V++  G  + +A+T +G VY++G G N  LGHG +     P+ ++    KG  V
Sbjct: 632 QDL-DIVKVRCGSQFSIALTKDGQVYTWGKGDNQRLGHGTEEHVRYPKLLEGL--KGKKV 688

Query: 326 VRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEP 368
           + V+AG  H +AL     V++WG        H D +  T PEP
Sbjct: 689 IDVAAGSTHCLALTEDSEVHSWGSN--DQCQHFDTLRITKPEP 729



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 76/242 (31%), Positives = 113/242 (46%), Gaps = 7/242 (2%)

Query: 119  GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
            GR+   L  +  +FS G    G LGH      C     I       +  ++   +H+A +
Sbjct: 3036 GRHAMALTVDGKIFSWGEGDDGKLGHF-SRMNCDKPRLIEALKTKRIRDIACGSSHSAAI 3094

Query: 179  LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN--FTGFLTIRGH 236
              SG+++T G       GH D N    +P++V+ L G    QV  G     T  LT  G 
Sbjct: 3095 TSSGELYTWGLGEYGRLGHGD-NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 3153

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 296
            V + G    G+LG G +     P++I  L   G V QI  G  + LA+T +GVV+++G G
Sbjct: 3154 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTWGKG 3212

Query: 297  SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 356
              F LGHG      +P+ ++  R  G  +V V+ G  H +A+  +G VY WG    G  G
Sbjct: 3213 DYFRLGHGTDVHVRKPQVVEGLR--GKKIVHVAVGALHCLAVTDTGQVYAWGDNDHGQQG 3270

Query: 357  HG 358
            +G
Sbjct: 3271 NG 3272



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 74/247 (29%), Positives = 125/247 (50%), Gaps = 12/247 (4%)

Query: 235  GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
            G ++  G N  GQLG   G  +  PTP +++A L  V    Q+  G   + AVT +G +Y
Sbjct: 3933 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPV----QLIGGEQTLFAVTADGKLY 3988

Query: 292  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 351
            + G G+   LG G       P  +++ +   I  V V++G +H +AL S G VY+WG+  
Sbjct: 3989 ATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAE 4048

Query: 352  CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 411
             G LGHG+      P  + SL+    V + A    +  +   G ++ +G   +G LG   
Sbjct: 4049 DGKLGHGNRSPCDRPRVIESLRGIEVVDIAAGGAHSACITAAGDLFTWGKGRYGRLG--- 4105

Query: 412  RGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG 469
             G S+  L+P+++++L+ + V  I+  +G   T+ +TD   ++ +GD +  +LG     G
Sbjct: 4106 HGDSEDQLKPKLVEALQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDG 4165

Query: 470  CLEPTEI 476
            C  P +I
Sbjct: 4166 CKVPMKI 4172



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 60/219 (27%), Positives = 103/219 (47%), Gaps = 21/219 (9%)

Query: 271 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 330
           VVQIA      L ++ NG VY+    S          D L P+ +Q+   + I  +   +
Sbjct: 430 VVQIACAEKRFLILSRNGRVYTQAYNS----------DTLGPQLVQSLASRNIVKIAAHS 479

Query: 331 GDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLA----VQVCARKRK 386
              H +AL ++G V++WG G  G LGHGD +    P+ +S+L    A    V +      
Sbjct: 480 DGHHYLALSANGEVFSWGCGDGGRLGHGDTVPLEEPKLISALSGKQAGKHVVHIACGSTY 539

Query: 387 TFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVV 444
           +  +   G +Y +G   +G LG    G S+    P ++  L+   V  +S  +G   T+ 
Sbjct: 540 SAAITAEGELYTWGRGNYGRLG---HGSSEDQTIPMLVTGLKGLKVIDVSCGSGDAQTLA 596

Query: 445 VTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQEMEE 483
           VT+ G+++ +GD +  +LG     GC  P    I+++++
Sbjct: 597 VTENGQVWSWGDGDYGKLGRGGSDGCKTPK--LIEKLQD 633



 Score = 69.7 bits (169), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 77/300 (25%), Positives = 121/300 (40%), Gaps = 64/300 (21%)

Query: 96   FLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFT 155
             L+S++H    ++  A N   + G++   L S   V+S G +  G LGHG   + C    
Sbjct: 4011 LLESIQHV--FIKKVAVN---SGGKHCLALSSEGEVYSWGEAEDGKLGHG-NRSPCDRPR 4064

Query: 156  RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 215
             I       VV ++A   H+A +  +G +FT G       GH D+   + +P+LVEAL+G
Sbjct: 4065 VIESLRGIEVVDIAAGGAHSACITAAGDLFTWGKGRYGRLGHGDSEDQL-KPKLVEALQG 4123

Query: 216  --------------------------------------------VPCK----------QV 221
                                                        VP K          +V
Sbjct: 4124 YRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKV 4183

Query: 222  TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 281
              G  F+  LT  G V+T G   + +LGHG       P+ +  L+    V+ IA G  + 
Sbjct: 4184 ECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQG-KKVIAIATGSLHC 4242

Query: 282  LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 341
            +  T +G VY++G      LG G  +   +PR +   + K I+  RV+ G  H +A  +S
Sbjct: 4243 VCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKIN--RVACGSAHTLAWSTS 4300



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 66/225 (29%), Positives = 100/225 (44%), Gaps = 8/225 (3%)

Query: 116  ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
            I  G  H+  I++S  +++ G    G LGHG  TTQ +    +       V+QV+     
Sbjct: 3084 IACGSSHSAAITSSGELYTWGLGEYGRLGHGDNTTQ-LKPKMVKVLLGHRVIQVACGSRD 3142

Query: 175  AA--FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            A    +   G VF+ GD      G R  +     P+ +E L G    Q+  G  F+  LT
Sbjct: 3143 AQTLALTDEGLVFSWGDGDFGKLG-RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALT 3201

Query: 233  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
              G V T G   + +LGHG  +    P+ +  L     +V +A G  + LAVT  G VY+
Sbjct: 3202 KSGVVWTWGKGDYFRLGHGTDVHVRKPQVVEGLRG-KKIVHVAVGALHCLAVTDTGQVYA 3260

Query: 293  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
            +G   +   G+G      +P  +Q    +G  + RV+ G  H VA
Sbjct: 3261 WGDNDHGQQGNGTTTVNRKPTLVQGL--EGQKITRVACGSSHSVA 3303



 Score = 55.8 bits (133), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 53/169 (31%), Positives = 76/169 (44%), Gaps = 8/169 (4%)

Query: 118 TGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
           +G   TL ++ N  V+S G    G LG G  +  C +   I       +V+V      + 
Sbjct: 589 SGDAQTLAVTENGQVWSWGDGDYGKLGRG-GSDGCKTPKLIEKLQDLDIVKVRCGSQFSI 647

Query: 177 FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
            + + GQV+T G   +   GH  T   +  P+L+E LKG     V AG      LT    
Sbjct: 648 ALTKDGQVYTWGKGDNQRLGH-GTEEHVRYPKLLEGLKGKKVIDVAAGSTHCLALTEDSE 706

Query: 237 VHTCGSNTHGQLGHGDTL--DRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
           VH+ GSN   Q  H DTL   +P P ++  L +   +V IA GP+   A
Sbjct: 707 VHSWGSNDQCQ--HFDTLRITKPEPAALPGL-DTKHIVGIACGPAQSFA 752



 Score = 46.2 bits (108), Expect = 0.040,   Method: Compositional matrix adjust.
 Identities = 49/184 (26%), Positives = 80/184 (43%), Gaps = 21/184 (11%)

Query: 299  FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG-- 356
            F     E+ D+ +       R+K       +AG E    + +   V+ WG      LG  
Sbjct: 2905 FLASDNEEEDDDKANTGSLVRKK-------AAGLESAATIRTK--VFVWGLNDKDQLGGL 2955

Query: 357  HGDEID-KTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVS 415
             G +I   +  E LS+L     VQV    +  F +   G VY  G    G LG    G+S
Sbjct: 2956 KGSKIKVPSFSETLSALN---VVQVAGGSKSLFAVTVEGKVYACGEATNGRLGL---GIS 3009

Query: 416  D-KVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLE 472
               V  PR + +L  + V +++  +G  H + +T  G++F +G+ +  +LGH +   C +
Sbjct: 3010 SGTVPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKIFSWGEGDDGKLGHFSRMNCDK 3069

Query: 473  PTEI 476
            P  I
Sbjct: 3070 PRLI 3073


>gi|196005109|ref|XP_002112421.1| hypothetical protein TRIADDRAFT_56425 [Trichoplax adhaerens]
 gi|190584462|gb|EDV24531.1| hypothetical protein TRIADDRAFT_56425 [Trichoplax adhaerens]
          Length = 4625

 Score =  130 bits (327), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 86/280 (30%), Positives = 137/280 (48%), Gaps = 8/280 (2%)

Query: 204  IFRPRLVEALKGVPCKQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKS 261
            I  P ++E L+ +  ++++  +G      LT    V + G    G+LGHGD L   TP+ 
Sbjct: 3843 IVTPVIIEPLQHLKIEKLSVHSGGRHAMVLTSNFEVFSWGDGEDGKLGHGDKLSSETPRK 3902

Query: 262  IAPLEEVGS-VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRR 320
            I  L  +G  +V I+ G S+  A+T  G +Y++G G    LGHG+  D L+P+ ++  + 
Sbjct: 3903 IEAL--LGKQIVHISCGSSHSAAITSKGELYTWGKGRYGRLGHGDGDDCLKPKLLEALKS 3960

Query: 321  KGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQV 380
              +  V   +GD   +A+     V++WG G  G LG G       P  + SL      +V
Sbjct: 3961 YKVIDVACGSGDAQTLAITDDDCVWSWGDGDYGKLGRGGSDGCKKPLRIESLIGMAVCKV 4020

Query: 381  CARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLY 440
                + +  L   G +Y +G   +  LG    G +D V RPR +  L+   +  ++ G  
Sbjct: 4021 ECGSQFSVALTKNGDLYTWGKGDYYRLG---HGTNDHVRRPRKVACLQGKQIVTVAAGSL 4077

Query: 441  HTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQE 480
            H V  TD G +F +GDN+  QLG+ TL    EPT + + E
Sbjct: 4078 HCVACTDAGEVFTWGDNDEGQLGNGTLNPIPEPTLVTVLE 4117



 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 94/289 (32%), Positives = 145/289 (50%), Gaps = 17/289 (5%)

Query: 207 PRLVEALKGVPCKQVTAGLNFTGFLTIR--GHVHTCGSNTHGQLGHGDTLDRPTPKSIAP 264
           P L+++L  +  K++ A +    +L +   G V++ GS   G+LGHGD   R  P+ +  
Sbjct: 502 PVLLDSLIDIKIKKIAANVEGEHYLALSSDGCVYSWGSGDGGRLGHGDI--RREPELVKE 559

Query: 265 LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH 324
           L     + QIA G +Y  AVT NG +Y++G GS   LGHG   D L P  +      G H
Sbjct: 560 LVN-KKITQIACGSTYSAAVTSNGELYTWGRGSYGRLGHGNSEDRLLPTLVAGL--SGSH 616

Query: 325 VVRVS--AGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSH--LAVQV 380
           VV V+  +GD H +A+D  G V++WG G  G LG G      +P+ + +LK H    V V
Sbjct: 617 VVDVACGSGDAHTLAIDKDGIVWSWGDGDYGKLGRGGSDCCKVPKVVETLKHHNKYIVNV 676

Query: 381 CARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLY 440
               + +  L   G+V+ +G      LG    G  D V  P++++ L  +H+  I+ G  
Sbjct: 677 LCGSQFSVALGKDGTVWTWGKSDGYRLG---HGTLDHVRYPKMVEGLINYHIVDIAVGPS 733

Query: 441 HTVVVTDRGRLFGFG-DNERAQLGHDTLRGCLEPTEIFIQEMEEDTGLA 488
           H + +TD  ++F +G D ++  L  D     +EPT I     E   G+A
Sbjct: 734 HCLALTDNCQIFTWGSDVQKYALSSDNYN--MEPTCISAINKEFIAGVA 780



 Score =  115 bits (287), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 92/340 (27%), Positives = 160/340 (47%), Gaps = 9/340 (2%)

Query: 128  NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTC 187
            +S VF  G +  G LG G + ++  S T +   +A   V ++        V   G+V+  
Sbjct: 2868 DSRVFVWGLNDKGQLG-GCKGSKVKSPTEMKNIAALRPVSIAGGSKTVFIVTYDGKVYVS 2926

Query: 188  GDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTA--GLNFTGFLTIRGHVHTCGSNTH 245
            G+ ++   G  +T   I  P  ++ L     K+VT   G   +  +T  G V + G    
Sbjct: 2927 GEGANGRLGLGNTEN-ISIPVQLDTLNMHFVKKVTVHPGGRHSLCITREGKVFSWGEGID 2985

Query: 246  GQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGE 305
            G+LGHGD   R +P  I  LE    +V+IA G S+  AVT +G +Y++G G    LGHG+
Sbjct: 2986 GKLGHGDVTSRLSPTLIEALES-KLIVEIACGSSHSAAVTADGELYTWGLGDYGRLGHGD 3044

Query: 306  QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTL 365
                  P+ ++  +   +  +   + D   +AL  +  V++WG G  G LG G      +
Sbjct: 3045 SKTLHIPKQVKALQDYKVIDIACGSRDAQTLALTDNNCVWSWGDGDFGKLGRGGSEGCNI 3104

Query: 366  PEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILD 425
            P+ + +L      ++    + +  L  TG V+ +G   +  LG    G       P++++
Sbjct: 3105 PQKIDALCGRDVCRIACGAQFSLALSTTGKVWTWGKGDYYRLG---HGNDSHYRSPQLIE 3161

Query: 426  -SLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 464
              L+   +++I+ G  H + VTD G ++ +GDN+  Q G+
Sbjct: 3162 GPLKKKRITEIAVGALHCLAVTDTGEVYSWGDNDHGQQGN 3201



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 86/286 (30%), Positives = 130/286 (45%), Gaps = 20/286 (6%)

Query: 119  GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
            GR+  +L SN  VFS G    G LGHG + +   +  +I       +V +S   +H+A +
Sbjct: 3866 GRHAMVLTSNFEVFSWGDGEDGKLGHGDKLSS-ETPRKIEALLGKQIVHISCGSSHSAAI 3924

Query: 179  LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH-- 236
               G+++T G       GH D +    +P+L+EALK      V  G      L I     
Sbjct: 3925 TSKGELYTWGKGRYGRLGHGDGD-DCLKPKLLEALKSYKVIDVACGSGDAQTLAITDDDC 3983

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG-SVVQIAAGPSYMLAVTGNGVVYSFGS 295
            V + G   +G+LG G +     P  I  L  +G +V ++  G  + +A+T NG +Y++G 
Sbjct: 3984 VWSWGDGDYGKLGRGGSDGCKKPLRIESL--IGMAVCKVECGSQFSVALTKNGDLYTWGK 4041

Query: 296  GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGAL 355
            G  + LGHG      +PR +     +G  +V V+AG  H VA   +G V+TWG    G L
Sbjct: 4042 GDYYRLGHGTNDHVRRPRKVACL--QGKQIVTVAAGSLHCVACTDAGEVFTWGDNDEGQL 4099

Query: 356  GHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGW 401
            G+G      +PEP           V   +      V  GS + F W
Sbjct: 4100 GNGTL--NPIPEP---------TLVTVLENVKLNRVGCGSAHSFAW 4134



 Score = 99.0 bits (245), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 76/249 (30%), Positives = 115/249 (46%), Gaps = 12/249 (4%)

Query: 233  IRGHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 289
            I   V   G N  GQLG   G  +  PT  K+IA L  V     IA G   +  VT +G 
Sbjct: 2867 IDSRVFVWGLNDKGQLGGCKGSKVKSPTEMKNIAALRPVS----IAGGSKTVFIVTYDGK 2922

Query: 290  VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 349
            VY  G G+N  LG G   +   P  + T     +  V V  G  H + +   G V++WG+
Sbjct: 2923 VYVSGEGANGRLGLGNTENISIPVQLDTLNMHFVKKVTVHPGGRHSLCITREGKVFSWGE 2982

Query: 350  GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGF 409
            G  G LGHGD   +  P  + +L+S L V++      +  +   G +Y +G   +G LG 
Sbjct: 2983 GIDGKLGHGDVTSRLSPTLIEALESKLIVEIACGSSHSAAVTADGELYTWGLGDYGRLGH 3042

Query: 410  PDRGVSDKVLRPRILDSLRAHHVSQISTGLY--HTVVVTDRGRLFGFGDNERAQLGHDTL 467
             D   S  +  P+ + +L+ + V  I+ G     T+ +TD   ++ +GD +  +LG    
Sbjct: 3043 GD---SKTLHIPKQVKALQDYKVIDIACGSRDAQTLALTDNNCVWSWGDGDFGKLGRGGS 3099

Query: 468  RGCLEPTEI 476
             GC  P +I
Sbjct: 3100 EGCNIPQKI 3108



 Score = 89.7 bits (221), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 72/252 (28%), Positives = 120/252 (47%), Gaps = 8/252 (3%)

Query: 119  GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
            GR+   +     VFS G  + G LGHG  T++ +S T I    +  +V+++   +H+A V
Sbjct: 2965 GRHSLCITREGKVFSWGEGIDGKLGHGDVTSR-LSPTLIEALESKLIVEIACGSSHSAAV 3023

Query: 179  LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF--TGFLTIRGH 236
               G+++T G       GH D+ + +  P+ V+AL+      +  G     T  LT    
Sbjct: 3024 TADGELYTWGLGDYGRLGHGDS-KTLHIPKQVKALQDYKVIDIACGSRDAQTLALTDNNC 3082

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG-SVVQIAAGPSYMLAVTGNGVVYSFGS 295
            V + G    G+LG G +     P+ I  L   G  V +IA G  + LA++  G V+++G 
Sbjct: 3083 VWSWGDGDFGKLGRGGSEGCNIPQKIDAL--CGRDVCRIACGAQFSLALSTTGKVWTWGK 3140

Query: 296  GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGAL 355
            G  + LGHG       P+ I+   +K   +  ++ G  H +A+  +G VY+WG    G  
Sbjct: 3141 GDYYRLGHGNDSHYRSPQLIEGPLKKK-RITEIAVGALHCLAVTDTGEVYSWGDNDHGQQ 3199

Query: 356  GHGDEIDKTLPE 367
            G+G+      P+
Sbjct: 3200 GNGNTTVNKRPQ 3211



 Score = 89.0 bits (219), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 68/244 (27%), Positives = 114/244 (46%), Gaps = 12/244 (4%)

Query: 238  HTCGSNTHGQLG--HGDTLDRPTPKSI-APLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 294
            +  G N  GQLG   G  +  P    I A L        +A G   +  +T  G VY+ G
Sbjct: 3773 YVWGHNHRGQLGGVQGTKVKSPVINDIIAALRPTA----VAGGEQTLFILTSEGKVYASG 3828

Query: 295  SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGA 354
             G +  LG G   + + P  I+  +   I  + V +G  H + L S+  V++WG G  G 
Sbjct: 3829 LGGSGRLGIGRSDNIVTPVIIEPLQHLKIEKLSVHSGGRHAMVLTSNFEVFSWGDGEDGK 3888

Query: 355  LGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGV 414
            LGHGD++    P  + +L     V +      +  +   G +Y +G   +G LG  D   
Sbjct: 3889 LGHGDKLSSETPRKIEALLGKQIVHISCGSSHSAAITSKGELYTWGKGRYGRLGHGD--- 3945

Query: 415  SDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLE 472
             D  L+P++L++L+++ V  ++  +G   T+ +TD   ++ +GD +  +LG     GC +
Sbjct: 3946 GDDCLKPKLLEALKSYKVIDVACGSGDAQTLAITDDDCVWSWGDGDYGKLGRGGSDGCKK 4005

Query: 473  PTEI 476
            P  I
Sbjct: 4006 PLRI 4009



 Score = 75.1 bits (183), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 65/250 (26%), Positives = 113/250 (45%), Gaps = 22/250 (8%)

Query: 107 VETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHG-----PETTQCVSFTRINFPS 161
           ++  A N++   G ++  L S+  V+S GS   G LGHG     PE  + +   +I    
Sbjct: 513 IKKIAANVE---GEHYLALSSDGCVYSWGSGDGGRLGHGDIRREPELVKELVNKKI---- 565

Query: 162 AAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQV 221
                Q++    ++A V  +G+++T G  S    GH ++   +  P LV  L G     V
Sbjct: 566 ----TQIACGSTYSAAVTSNGELYTWGRGSYGRLGHGNSEDRLL-PTLVAGLSGSHVVDV 620

Query: 222 TAGLNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS-VVQIAAGP 278
             G      L I   G V + G   +G+LG G +     PK +  L+     +V +  G 
Sbjct: 621 ACGSGDAHTLAIDKDGIVWSWGDGDYGKLGRGGSDCCKVPKVVETLKHHNKYIVNVLCGS 680

Query: 279 SYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
            + +A+  +G V+++G    + LGHG       P+ ++       H+V ++ G  H +AL
Sbjct: 681 QFSVALGKDGTVWTWGKSDGYRLGHGTLDHVRYPKMVEGL--INYHIVDIAVGPSHCLAL 738

Query: 339 DSSGYVYTWG 348
             +  ++TWG
Sbjct: 739 TDNCQIFTWG 748



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 48/152 (31%), Positives = 65/152 (42%), Gaps = 3/152 (1%)

Query: 118  TGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
            +G   TL I++   V+S G    G LG G  +  C    RI       V +V      + 
Sbjct: 3970 SGDAQTLAITDDDCVWSWGDGDYGKLGRGG-SDGCKKPLRIESLIGMAVCKVECGSQFSV 4028

Query: 177  FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
             + ++G ++T G    +  GH  TN  + RPR V  L+G     V AG       T  G 
Sbjct: 4029 ALTKNGDLYTWGKGDYYRLGH-GTNDHVRRPRKVACLQGKQIVTVAAGSLHCVACTDAGE 4087

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEV 268
            V T G N  GQLG+G     P P  +  LE V
Sbjct: 4088 VFTWGDNDEGQLGNGTLNPIPEPTLVTVLENV 4119


>gi|307178981|gb|EFN67497.1| Probable E3 ubiquitin-protein ligase HERC4 [Camponotus floridanus]
          Length = 1048

 Score =  130 bits (327), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 104/349 (29%), Positives = 166/349 (47%), Gaps = 17/349 (4%)

Query: 131 VFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSASENHAAFVLQSGQVFTCGD 189
           +F  GS++ G LG G    + +   R ++F  A  V Q++  EN+   +   GQV++CG+
Sbjct: 1   MFCWGSTIHGELGLGGIEDENIFMPRQVDFAKANEVEQIACGENYTVTITNDGQVYSCGN 60

Query: 190 NSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLG 249
           N     GH    +   R +L+  L     K++  G   T  +   G + + G N  GQLG
Sbjct: 61  NDYGQLGHEKARK---RLQLIPGLDAFVFKKIACGSCHTLAVNEWGQLFSWGCNMKGQLG 117

Query: 250 HG--DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH 307
               D  +R TP+ +  L     +VQIA G  + +A+T +G +YS+GS     LG G   
Sbjct: 118 LNSVDCTER-TPRMVKAL-GTSVIVQIACGIEHSIALTNDGELYSWGSNREGQLGIGSHT 175

Query: 308 -DELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP 366
             E++P+ I T     + +  ++ G  H V +  SG V+ WG+   G LG  D   + +P
Sbjct: 176 VTEIKPKRIITL--AAVPIAFIACGGYHTVVISKSGVVFAWGRNTFGQLGLNDTQQRIVP 233

Query: 367 EPLSSLK-SHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILD 425
             L +L+ + +    C  +   F+ +D G V+  G   +G LG    G     + PR + 
Sbjct: 234 CQLRTLRNAKVCYAACGEEFSVFLTLD-GGVFTCGAGMYGQLG---HGNGMNEILPRQVM 289

Query: 426 SLRAHHVSQISTGLYHTV-VVTDRGRLFGFGDNERAQLGHDTLRGCLEP 473
            L    V+QIS G  HT+ +V  RGR++ +G     QLG+   R    P
Sbjct: 290 ELMGSTVTQISCGKRHTLALVPSRGRVYAWGLGGAGQLGNRASRSATTP 338



 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 91/297 (30%), Positives = 141/297 (47%), Gaps = 9/297 (3%)

Query: 115 QITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
           QI  G  +T+ I+N   V+SCG++  G LGH     +      ++   A    +++    
Sbjct: 38  QIACGENYTVTITNDGQVYSCGNNDYGQLGHEKARKRLQLIPGLD---AFVFKKIACGSC 94

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
           H   V + GQ+F+ G N     G    +     PR+V+AL      Q+  G+  +  LT 
Sbjct: 95  HTLAVNEWGQLFSWGCNMKGQLGLNSVDCTERTPRMVKALGTSVIVQIACGIEHSIALTN 154

Query: 234 RGHVHTCGSNTHGQLGHGD-TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
            G +++ GSN  GQLG G  T+    PK I  L  V  +  IA G  + + ++ +GVV++
Sbjct: 155 DGELYSWGSNREGQLGIGSHTVTEIKPKRIITLAAV-PIAFIACGGYHTVVISKSGVVFA 213

Query: 293 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 352
           +G  +   LG  +    + P  ++T R     V   + G+E  V L   G V+T G G  
Sbjct: 214 WGRNTFGQLGLNDTQQRIVPCQLRTLRNA--KVCYAACGEEFSVFLTLDGGVFTCGAGMY 271

Query: 353 GALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDT-GSVYGFGWMGFGSLG 408
           G LGHG+ +++ LP  +  L      Q+   KR T  LV + G VY +G  G G LG
Sbjct: 272 GQLGHGNGMNEILPRQVMELMGSTVTQISCGKRHTLALVPSRGRVYAWGLGGAGQLG 328



 Score = 91.7 bits (226), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 67/240 (27%), Positives = 118/240 (49%), Gaps = 12/240 (5%)

Query: 241 GSNTHGQLGHGDTLDRP--TPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
           GS  HG+LG G   D     P+ +    +   V QIA G +Y + +T +G VYS G+   
Sbjct: 5   GSTIHGELGLGGIEDENIFMPRQV-DFAKANEVEQIACGENYTVTITNDGQVYSCGNNDY 63

Query: 299 FCLGHGEQHDELQ-PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG- 356
             LGH +    LQ    +  F  K     +++ G  H +A++  G +++WG    G LG 
Sbjct: 64  GQLGHEKARKRLQLIPGLDAFVFK-----KIACGSCHTLAVNEWGQLFSWGCNMKGQLGL 118

Query: 357 HGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSD 416
           +  +  +  P  + +L + + VQ+      +  L + G +Y +G    G LG     V++
Sbjct: 119 NSVDCTERTPRMVKALGTSVIVQIACGIEHSIALTNDGELYSWGSNREGQLGIGSHTVTE 178

Query: 417 KVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 476
             ++P+ + +L A  ++ I+ G YHTVV++  G +F +G N   QLG +  +  + P ++
Sbjct: 179 --IKPKRIITLAAVPIAFIACGGYHTVVISKSGVVFAWGRNTFGQLGLNDTQQRIVPCQL 236


>gi|86129504|ref|NP_001034387.1| probable E3 ubiquitin-protein ligase HERC3 [Gallus gallus]
 gi|60098971|emb|CAH65316.1| hypothetical protein RCJMB04_17g7 [Gallus gallus]
          Length = 1050

 Score =  130 bits (327), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 99/303 (32%), Positives = 156/303 (51%), Gaps = 12/303 (3%)

Query: 164 HVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTA 223
           +V +V+   NH+ F+L+ G+V+TCG N+    GH        +P  + AL G     V  
Sbjct: 35  NVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHESEGS---KPEPIGALAGQHIVHVAC 91

Query: 224 GLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPT-PKSIAPLEEVGSVVQIAAGPSYML 282
           G + +  L+ +G V + G+ + GQLG     D  T P+ I  L +  +++QI+ G  + L
Sbjct: 92  GESHSVALSDQGQVFSWGAGSDGQLGLTTIEDAVTVPRLIKKLNQ-QTILQISCGNWHCL 150

Query: 283 AVTGNGVVYSFGSGSNFCLGHGEQ-HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 341
           A+  +G  +++G  S   LG G++   +  P+ +++    GI + +V+AG  H  AL  S
Sbjct: 151 ALAADGQFFTWGQNSYGQLGLGKECPSQASPQRVKSL--DGIPLAQVAAGGAHSFALSLS 208

Query: 342 GYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGW 401
           G V+ WGK   G LG  DE D+  P  +  L+S   V +   +  T VL  +G V+ FG 
Sbjct: 209 GAVFGWGKNSSGQLGLSDERDRESPCHVKLLRSQKVVYISCGEEHTAVLTKSGGVFTFGA 268

Query: 402 MGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV-VTDRGRLFGFGDNERA 460
              G LG     ++D+V  PR +  L    VSQI+ G +HT+  V   G ++ FG   R 
Sbjct: 269 GSCGQLG--HDSMNDEV-NPRRVLELMGSEVSQIACGRHHTLAFVPSSGMIYAFGCGTRG 325

Query: 461 QLG 463
           QLG
Sbjct: 326 QLG 328



 Score =  127 bits (319), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 94/296 (31%), Positives = 143/296 (48%), Gaps = 19/296 (6%)

Query: 193 FCCGHRDTNRP---------IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 243
            C G+    +P         I  P++   +     K+V  G N + FL   G V+TCG N
Sbjct: 2   LCWGYSSFGQPGIGSNLQVIIPEPQVYGFIHDRNVKEVACGGNHSVFLLEDGEVYTCGLN 61

Query: 244 THGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH 303
           T GQLGH     +P P      + +   V +A G S+ +A++  G V+S+G+GS+  LG 
Sbjct: 62  TKGQLGHESEGSKPEPIGALAGQHI---VHVACGESHSVALSDQGQVFSWGAGSDGQLGL 118

Query: 304 GEQHDELQ-PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEI- 361
               D +  PR I+   ++ I  +++S G+ H +AL + G  +TWG+   G LG G E  
Sbjct: 119 TTIEDAVTVPRLIKKLNQQTI--LQISCGNWHCLALAADGQFFTWGQNSYGQLGLGKECP 176

Query: 362 DKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRP 421
            +  P+ + SL      QV A    +F L  +G+V+G+G    G LG  D    +    P
Sbjct: 177 SQASPQRVKSLDGIPLAQVAAGGAHSFALSLSGAVFGWGKNSSGQLGLSDERDRES---P 233

Query: 422 RILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF 477
             +  LR+  V  IS G  HT V+T  G +F FG     QLGHD++   + P  + 
Sbjct: 234 CHVKLLRSQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVL 289



 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 89/309 (28%), Positives = 146/309 (47%), Gaps = 14/309 (4%)

Query: 102 HSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPS 161
           H  ++ E + G      G +   L+ +  V++CG +  G LGH  E ++      I   +
Sbjct: 32  HDRNVKEVACG------GNHSVFLLEDGEVYTCGLNTKGQLGHESEGSKP---EPIGALA 82

Query: 162 AAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQV 221
             H+V V+  E+H+  +   GQVF+ G  S    G       +  PRL++ L      Q+
Sbjct: 83  GQHIVHVACGESHSVALSDQGQVFSWGAGSDGQLGLTTIEDAVTVPRLIKKLNQQTILQI 142

Query: 222 TAGLNFTGFLTIRGHVHTCGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSY 280
           + G      L   G   T G N++GQLG G +   + +P+ +  L+ +  + Q+AAG ++
Sbjct: 143 SCGNWHCLALAADGQFFTWGQNSYGQLGLGKECPSQASPQRVKSLDGI-PLAQVAAGGAH 201

Query: 281 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 340
             A++ +G V+ +G  S+  LG  ++ D   P  ++  R +   VV +S G+EH   L  
Sbjct: 202 SFALSLSGAVFGWGKNSSGQLGLSDERDRESPCHVKLLRSQ--KVVYISCGEEHTAVLTK 259

Query: 341 SGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGF 399
           SG V+T+G G CG LGH    D+  P  +  L      Q+ C R      +  +G +Y F
Sbjct: 260 SGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVSQIACGRHHTLAFVPSSGMIYAF 319

Query: 400 GWMGFGSLG 408
           G    G LG
Sbjct: 320 GCGTRGQLG 328



 Score =  102 bits (253), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 83/266 (31%), Positives = 124/266 (46%), Gaps = 8/266 (3%)

Query: 114 MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           + +  G  H++ +S+   VFS G+   G LG             I   +   ++Q+S   
Sbjct: 87  VHVACGESHSVALSDQGQVFSWGAGSDGQLGLTTIEDAVTVPRLIKKLNQQTILQISCGN 146

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            H   +   GQ FT G NS    G          P+ V++L G+P  QV AG   +  L+
Sbjct: 147 WHCLALAADGQFFTWGQNSYGQLGLGKECPSQASPQRVKSLDGIPLAQVAAGGAHSFALS 206

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
           + G V   G N+ GQLG  D  DR +P  +  L     VV I+ G  +   +T +G V++
Sbjct: 207 LSGAVFGWGKNSSGQLGLSDERDRESPCHVKLLRS-QKVVYISCGEEHTAVLTKSGGVFT 265

Query: 293 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA-LDSSGYVYTWGKGY 351
           FG+GS   LGH   +DE+ PR +      G  V +++ G  H +A + SSG +Y +G G 
Sbjct: 266 FGAGSCGQLGHDSMNDEVNPRRV--LELMGSEVSQIACGRHHTLAFVPSSGMIYAFGCGT 323

Query: 352 CGALGHGDEIDKTLPEPLSSLKSHLA 377
            G LG G   +   P P   +K H A
Sbjct: 324 RGQLGTGHTCNVKCPSP---VKGHWA 346



 Score = 47.4 bits (111), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 38/144 (26%), Positives = 62/144 (43%), Gaps = 10/144 (6%)

Query: 347 WGKGYCGALGHGDEIDKTLPEPLSSLKSH---LAVQVCARKRKTFVLVDTGSVYGFGWMG 403
           WG    G  G G  +   +PEP      H   +    C      F+L D G VY  G   
Sbjct: 4   WGYSSFGQPGIGSNLQVIIPEPQVYGFIHDRNVKEVACGGNHSVFLLED-GEVYTCGLNT 62

Query: 404 FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 463
            G LG    G      +P  + +L   H+  ++ G  H+V ++D+G++F +G     QLG
Sbjct: 63  KGQLGHESEGS-----KPEPIGALAGQHIVHVACGESHSVALSDQGQVFSWGAGSDGQLG 117

Query: 464 HDTLRGCLEPTEIFIQEMEEDTGL 487
             T+   +    + I+++ + T L
Sbjct: 118 LTTIEDAVTVPRL-IKKLNQQTIL 140


>gi|397515765|ref|XP_003828114.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase HERC2
            [Pan paniscus]
          Length = 4839

 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 96/328 (29%), Positives = 158/328 (48%), Gaps = 16/328 (4%)

Query: 161  SAAHVVQVSASENHAAFVLQSGQVFTCGD--NSSFCCGHRDTNRPIFRPRLVEALKGVPC 218
            SA +VVQV+        V   G+V+ CG+  N     G      PI  PR + AL     
Sbjct: 2995 SALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPI--PRQITALSSYVV 3052

Query: 219  KQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA 276
            K+V   +G      LT+ G V + G    G+LGH   ++   P+ I  L+    +  IA 
Sbjct: 3053 KKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALK-TKRIRDIAC 3111

Query: 277  GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEH 334
            G S+  A+T +G +Y++G G    LGHG+   +L+P+ ++     G  V++V+ G  D  
Sbjct: 3112 GSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLL--GHRVIQVACGSRDAQ 3169

Query: 335  VVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 394
             +AL   G V++WG G  G LG G      +P+ +  L      Q+    + +  L  +G
Sbjct: 3170 TLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSG 3229

Query: 395  SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 454
             V+ +G   +  LG    G    V +P++++ LR   +  ++ G  H + VTD G+++ +
Sbjct: 3230 VVWTWGKGDYFRLG---HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAW 3286

Query: 455  GDNERAQLGHDTLRGCLEPTEIFIQEME 482
            GDN+  Q G+ T     +PT   +Q +E
Sbjct: 3287 GDNDHGQQGNGTTTVNRKPT--LVQGLE 3312



 Score =  126 bits (316), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 93/286 (32%), Positives = 140/286 (48%), Gaps = 10/286 (3%)

Query: 183  QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 242
            +VF  G N     G    ++ I  P   E L  +   QV  G      +T+ G V+ CG 
Sbjct: 2965 KVFVWGLNDKDQLGGLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGE 3023

Query: 243  NTHGQLGHG-DTLDRPTPKSIAPLEE-VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 300
             T+G+LG G  +   P P+ I  L   V   V + +G  +  A+T +G V+S+G G +  
Sbjct: 3024 ATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGK 3083

Query: 301  LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 360
            LGH  + +  +PR I+  + K I    ++ G  H  AL SSG +YTWG G  G LGHGD 
Sbjct: 3084 LGHFSRMNCDKPRLIEALKTKRIR--DIACGSSHSAALTSSGELYTWGLGEYGRLGHGDN 3141

Query: 361  IDKTLPEPLSSLKSHLAVQVC--ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKV 418
              +  P+ +  L  H  +QV   +R  +T  L D G V+ +G   FG LG   RG S+  
Sbjct: 3142 TTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLG---RGGSEGC 3198

Query: 419  LRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 464
              P+ ++ L    V QI  G   ++ +T  G ++ +G  +  +LGH
Sbjct: 3199 NIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGH 3244



 Score =  122 bits (307), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 86/280 (30%), Positives = 139/280 (49%), Gaps = 9/280 (3%)

Query: 166  VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 225
            V V++   H   +   G+V++ G+      GH + + P  RPR++E+L+G+    V AG 
Sbjct: 4047 VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRS-PCDRPRVIESLRGIEVVDVAAGG 4105

Query: 226  NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA--AGPSYMLA 283
              +  +T  G ++T G   +G+LGH D+ D+  PK +  L+    VV IA  +G +  L 
Sbjct: 4106 AHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQG-HRVVDIACGSGDAQTLC 4164

Query: 284  VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 343
            +T +  V+S+G G    LG G       P  I +    G+ VV+V  G +  VAL  SG 
Sbjct: 4165 LTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL--TGLGVVKVECGSQFSVALTKSGA 4222

Query: 344  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 403
            VYTWGKG    LGHG +     P  +  L+    + +           + G VY +G   
Sbjct: 4223 VYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDND 4282

Query: 404  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV 443
             G LG    G ++ + RPR++ +L+   V++++ G  HT+
Sbjct: 4283 EGQLG---DGTTNAIQRPRLVAALQGKKVNRVACGSAHTL 4319



 Score =  122 bits (305), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 82/269 (30%), Positives = 131/269 (48%), Gaps = 6/269 (2%)

Query: 207  PRLVEALKGVPCKQV--TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP 264
            P L+E+++ V  K+V   +G      L+  G V++ G    G+LGHG+      P+ I  
Sbjct: 4033 PTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIES 4092

Query: 265  LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH 324
            L  +  VV +AAG ++   VT  G +Y++G G    LGH +  D+L+P+ ++  +   + 
Sbjct: 4093 LRGI-EVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVV 4151

Query: 325  VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARK 384
             +   +GD   + L     V++WG G  G LG G      +P  + SL     V+V    
Sbjct: 4152 DIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGS 4211

Query: 385  RKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV 444
            + +  L  +G+VY +G   +  LG    G  D V RPR +  L+   V  I+TG  H V 
Sbjct: 4212 QFSVALTKSGAVYTWGKGDYHRLG---HGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 4268

Query: 445  VTDRGRLFGFGDNERAQLGHDTLRGCLEP 473
             T+ G ++ +GDN+  QLG  T      P
Sbjct: 4269 CTEDGEVYTWGDNDEGQLGDGTTNAIQRP 4297



 Score =  118 bits (295), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 92/311 (29%), Positives = 151/311 (48%), Gaps = 24/311 (7%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V Q++ +E     + ++G+V+T   NS       DT      P+LV+ L      ++ A 
Sbjct: 399 VTQIACAEKRFLILSRNGRVYTQAYNS-------DT----LAPQLVQGLASRNIVKIAAH 447

Query: 225 LNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGS-VVQIAAGPS 279
            +   +L +   G V++ G    G+LGHGDT+    PK I+    ++ G  VV IA G +
Sbjct: 448 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGST 507

Query: 280 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS--AGDEHVVA 337
           Y  A+T  G +Y++G G+   LGHG   DE  P  +     KG+ V+ V+  +GD   +A
Sbjct: 508 YSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGL--KGLKVIDVACGSGDAQTLA 565

Query: 338 LDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVY 397
           +  +G V++WG G  G LG G       P+ +  L+    V+V    + +  L   G VY
Sbjct: 566 VTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVY 625

Query: 398 GFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDN 457
            +G      LG    G  + V  P++L+ L+   V  ++ G  H + +T+   +  +G N
Sbjct: 626 SWGKGDNQRLG---HGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSN 682

Query: 458 ERAQLGHDTLR 468
           ++ Q   DTLR
Sbjct: 683 DQCQ-HFDTLR 692



 Score =  102 bits (254), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 84/265 (31%), Positives = 126/265 (47%), Gaps = 12/265 (4%)

Query: 96   FLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFT 155
             L+S++H    ++  A N   + G++   L S   V+S G +  G LGHG   + C    
Sbjct: 4035 LLESIQHV--FIKKVAVN---SGGKHCLALSSEGEVYSWGEAEDGKLGHG-NRSPCDRPR 4088

Query: 156  RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 215
             I       VV V+A   H+A V  +G ++T G       GH D+   + +P+LVEAL+G
Sbjct: 4089 VIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQL-KPKLVEALQG 4147

Query: 216  VPCKQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
                 +   +G   T  LT    V + G   +G+LG G +     P  I  L  +G VV+
Sbjct: 4148 HRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLG-VVK 4206

Query: 274  IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
            +  G  + +A+T +G VY++G G    LGHG      +PR +Q    +G  V+ ++ G  
Sbjct: 4207 VECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGL--QGKKVIAIATGSL 4264

Query: 334  HVVALDSSGYVYTWGKGYCGALGHG 358
            H V     G VYTWG    G LG G
Sbjct: 4265 HCVCCTEDGEVYTWGDNDEGQLGDG 4289



 Score =  101 bits (252), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 77/247 (31%), Positives = 125/247 (50%), Gaps = 12/247 (4%)

Query: 235  GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
            G ++  G N  GQLG   G  +  PTP +++A L  V    Q+  G   + AVT +G +Y
Sbjct: 3957 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPV----QLIGGEQTLFAVTADGKLY 4012

Query: 292  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 351
            + G G+   LG G       P  +++ +   I  V V++G +H +AL S G VY+WG+  
Sbjct: 4013 ATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAE 4072

Query: 352  CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 411
             G LGHG+      P  + SL+    V V A    +  +   G +Y +G   +G LG  D
Sbjct: 4073 DGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD 4132

Query: 412  RGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG 469
               S+  L+P+++++L+ H V  I+  +G   T+ +TD   ++ +GD +  +LG     G
Sbjct: 4133 ---SEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDG 4189

Query: 470  CLEPTEI 476
            C  P +I
Sbjct: 4190 CKVPMKI 4196



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 79/242 (32%), Positives = 114/242 (47%), Gaps = 7/242 (2%)

Query: 119  GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
            GR+ T L  +  VFS G    G LGH      C     I       +  ++   +H+A +
Sbjct: 3061 GRHATALTVDGKVFSWGEGDDGKLGHF-SRMNCDKPRLIEALKTKRIRDIACGSSHSAAL 3119

Query: 179  LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN--FTGFLTIRGH 236
              SG+++T G       GH D N    +P++V+ L G    QV  G     T  LT  G 
Sbjct: 3120 TSSGELYTWGLGEYGRLGHGD-NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 3178

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 296
            V + G    G+LG G +     P++I  L   G V QI  G  + LA+T +GVV+++G G
Sbjct: 3179 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTWGKG 3237

Query: 297  SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 356
              F LGHG      +P+ ++  R  G  +V V+ G  H +A+  SG VY WG    G  G
Sbjct: 3238 DYFRLGHGSDVHVRKPQVVEGLR--GKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQG 3295

Query: 357  HG 358
            +G
Sbjct: 3296 NG 3297



 Score = 98.6 bits (244), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 88/328 (26%), Positives = 149/328 (45%), Gaps = 26/328 (7%)

Query: 50  PQKFRSLVDLAASQLCALHSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVET 109
           P +   L +L  +Q+      +  +SRN ++    +   +     + +Q +  S +IV+ 
Sbjct: 388 PIQCEGLANLGVTQIACAEKRFLILSRNGRV--YTQAYNSDTLAPQLVQGLA-SRNIVKI 444

Query: 110 SAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSA 162
           +A     + G ++  L +   V+S G    G LGHG       P+     S  +    + 
Sbjct: 445 AAH----SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQ----AG 496

Query: 163 AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 222
            HVV ++    ++A +   G+++T G  +    GH  +      P LV  LKG+    V 
Sbjct: 497 KHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVA 555

Query: 223 AGLNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 280
            G      L +   G V + G   +G+LG G +    TPK I  L+++  VV++  G  +
Sbjct: 556 CGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL-DVVKVRCGSQF 614

Query: 281 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 340
            +A+T +G VYS+G G N  LGHG +     P+ ++    +G  V+ V+AG  H +AL  
Sbjct: 615 SIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGL--QGKKVIDVAAGSTHCLALTE 672

Query: 341 SGYVYTWGKGYCGALGHGDEIDKTLPEP 368
              V++WG        H D +  T PEP
Sbjct: 673 DSEVHSWGSN--DQCQHFDTLRVTKPEP 698



 Score = 76.6 bits (187), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 58/219 (26%), Positives = 100/219 (45%), Gaps = 21/219 (9%)

Query: 271 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 330
           V QIA      L ++ NG VY+    S          D L P+ +Q    + I  +   +
Sbjct: 399 VTQIACAEKRFLILSRNGRVYTQAYNS----------DTLAPQLVQGLASRNIVKIAAHS 448

Query: 331 GDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLA----VQVCARKRK 386
              H +AL ++G VY+WG G  G LGHGD +    P+ +S+     A    V +      
Sbjct: 449 DGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTY 508

Query: 387 TFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVV 444
           +  +   G +Y +G   +G LG    G S+    P ++  L+   V  ++  +G   T+ 
Sbjct: 509 SAAITAEGELYTWGRGNYGRLG---HGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLA 565

Query: 445 VTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQEMEE 483
           VT+ G+++ +GD +  +LG     GC  P    I+++++
Sbjct: 566 VTENGQVWSWGDGDYGKLGRGGSDGCKTPK--LIEKLQD 602



 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 66/225 (29%), Positives = 100/225 (44%), Gaps = 8/225 (3%)

Query: 116  ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
            I  G  H+  L S+  +++ G    G LGHG  TTQ +    +       V+QV+     
Sbjct: 3109 IACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQ-LKPKMVKVLLGHRVIQVACGSRD 3167

Query: 175  AA--FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            A    +   G VF+ GD      G R  +     P+ +E L G    Q+  G  F+  LT
Sbjct: 3168 AQTLALTDEGLVFSWGDGDFGKLG-RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALT 3226

Query: 233  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
              G V T G   + +LGHG  +    P+ +  L     +V +A G  + LAVT +G VY+
Sbjct: 3227 KSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRG-KKIVHVAVGALHCLAVTDSGQVYA 3285

Query: 293  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
            +G   +   G+G      +P  +Q    +G  + RV+ G  H VA
Sbjct: 3286 WGDNDHGQQGNGTTTVNRKPTLVQGL--EGQKITRVACGSSHSVA 3328



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 50/167 (29%), Positives = 76/167 (45%), Gaps = 4/167 (2%)

Query: 118  TGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
            +G   TL L  + +V+S G    G LG G  +  C    +I+  +   VV+V      + 
Sbjct: 4157 SGDAQTLCLTDDDTVWSWGDGDYGKLGRG-GSDGCKVPMKIDSLTGLGVVKVECGSQFSV 4215

Query: 177  FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
             + +SG V+T G       GH   +  + RPR V+ L+G     +  G       T  G 
Sbjct: 4216 ALTKSGAVYTWGKGDYHRLGHGSDDH-VRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGE 4274

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
            V+T G N  GQLG G T     P+ +A L+    V ++A G ++ LA
Sbjct: 4275 VYTWGDNDEGQLGDGTTNAIQRPRLVAALQG-KKVNRVACGSAHTLA 4320



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 52/169 (30%), Positives = 76/169 (44%), Gaps = 8/169 (4%)

Query: 118 TGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
           +G   TL ++ N  V+S G    G LG G  +  C +   I       VV+V      + 
Sbjct: 558 SGDAQTLAVTENGQVWSWGDGDYGKLGRG-GSDGCKTPKLIEKLQDLDVVKVRCGSQFSI 616

Query: 177 FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
            + + GQV++ G   +   GH  T   +  P+L+E L+G     V AG      LT    
Sbjct: 617 ALTKDGQVYSWGKGDNQRLGH-GTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSE 675

Query: 237 VHTCGSNTHGQLGHGDTL--DRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
           VH+ GSN   Q  H DTL   +P P ++  L +   +V IA GP+   A
Sbjct: 676 VHSWGSNDQCQ--HFDTLRVTKPEPAALPGL-DTKHIVGIACGPAQSFA 721



 Score = 52.4 bits (124), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 36/147 (24%), Positives = 71/147 (48%), Gaps = 5/147 (3%)

Query: 332  DEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 391
            D+  ++   SG +Y WG  + G LG  +     +P P  +L +   VQ+   ++  F + 
Sbjct: 3947 DDWTLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVT 4006

Query: 392  DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRG 449
              G +Y     G+G+ G    G ++ V  P +L+S++   + +++  +G  H + ++  G
Sbjct: 4007 ADGKLYA---TGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 4063

Query: 450  RLFGFGDNERAQLGHDTLRGCLEPTEI 476
             ++ +G+ E  +LGH     C  P  I
Sbjct: 4064 EVYSWGEAEDGKLGHGNRSPCDRPRVI 4090



 Score = 45.4 bits (106), Expect = 0.064,   Method: Compositional matrix adjust.
 Identities = 45/161 (27%), Positives = 74/161 (45%), Gaps = 14/161 (8%)

Query: 322  GIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG--HGDEID-KTLPEPLSSLKSHLAV 378
            G  + + +AG E    + +   V+ WG      LG   G +I   +  E LS+L     V
Sbjct: 2946 GSLIRKKAAGLESAATIRTK--VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALN---VV 3000

Query: 379  QVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSD-KVLRPRILDSLRAHHVSQIS- 436
            QV    +  F +   G VY  G    G LG    G+S   V  PR + +L ++ V +++ 
Sbjct: 3001 QVAGGSKSLFAVTVEGKVYACGEATNGRLGL---GISSGTVPIPRQITALSSYVVKKVAV 3057

Query: 437  -TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 476
             +G  H   +T  G++F +G+ +  +LGH +   C +P  I
Sbjct: 3058 HSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLI 3098


>gi|426378407|ref|XP_004055918.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
            HERC2-like, partial [Gorilla gorilla gorilla]
          Length = 4586

 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 96/328 (29%), Positives = 158/328 (48%), Gaps = 16/328 (4%)

Query: 161  SAAHVVQVSASENHAAFVLQSGQVFTCGD--NSSFCCGHRDTNRPIFRPRLVEALKGVPC 218
            SA +VVQV+        V   G+V+ CG+  N     G      PI  PR + AL     
Sbjct: 2742 SALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPI--PRQITALSSYVV 2799

Query: 219  KQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA 276
            K+V   +G      LT+ G V + G    G+LGH   ++   P+ I  L+    +  IA 
Sbjct: 2800 KKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALK-TKRIRDIAC 2858

Query: 277  GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEH 334
            G S+  A+T +G +Y++G G    LGHG+   +L+P+ ++     G  V++V+ G  D  
Sbjct: 2859 GSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLL--GHRVIQVACGSRDAQ 2916

Query: 335  VVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 394
             +AL   G V++WG G  G LG G      +P+ +  L      Q+    + +  L  +G
Sbjct: 2917 TLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSG 2976

Query: 395  SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 454
             V+ +G   +  LG    G    V +P++++ LR   +  ++ G  H + VTD G+++ +
Sbjct: 2977 VVWTWGKGDYFRLG---HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAW 3033

Query: 455  GDNERAQLGHDTLRGCLEPTEIFIQEME 482
            GDN+  Q G+ T     +PT   +Q +E
Sbjct: 3034 GDNDHGQQGNGTTTVNRKPT--LVQGLE 3059



 Score =  126 bits (316), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 93/286 (32%), Positives = 140/286 (48%), Gaps = 10/286 (3%)

Query: 183  QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 242
            +VF  G N     G    ++ I  P   E L  +   QV  G      +T+ G V+ CG 
Sbjct: 2712 KVFVWGLNDKDQLGGLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGE 2770

Query: 243  NTHGQLGHG-DTLDRPTPKSIAPLEE-VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 300
             T+G+LG G  +   P P+ I  L   V   V + +G  +  A+T +G V+S+G G +  
Sbjct: 2771 ATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGK 2830

Query: 301  LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 360
            LGH  + +  +PR I+  + K I    ++ G  H  AL SSG +YTWG G  G LGHGD 
Sbjct: 2831 LGHFSRMNCDKPRLIEALKTKRIR--DIACGSSHSAALTSSGELYTWGLGEYGRLGHGDN 2888

Query: 361  IDKTLPEPLSSLKSHLAVQVC--ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKV 418
              +  P+ +  L  H  +QV   +R  +T  L D G V+ +G   FG LG   RG S+  
Sbjct: 2889 TTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLG---RGGSEGC 2945

Query: 419  LRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 464
              P+ ++ L    V QI  G   ++ +T  G ++ +G  +  +LGH
Sbjct: 2946 NIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGH 2991



 Score =  122 bits (306), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 86/280 (30%), Positives = 139/280 (49%), Gaps = 9/280 (3%)

Query: 166  VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 225
            V V++   H   +   G+V++ G+      GH + + P  RPR++E+L+G+    V AG 
Sbjct: 3794 VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRS-PCDRPRVIESLRGIEVVDVAAGG 3852

Query: 226  NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA--AGPSYMLA 283
              +  +T  G ++T G   +G+LGH D+ D+  PK +  L+    VV IA  +G +  L 
Sbjct: 3853 AHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQG-HRVVDIACGSGDAQTLC 3911

Query: 284  VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 343
            +T +  V+S+G G    LG G       P  I +    G+ VV+V  G +  VAL  SG 
Sbjct: 3912 LTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL--TGLGVVKVECGSQFSVALTKSGA 3969

Query: 344  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 403
            VYTWGKG    LGHG +     P  +  L+    + +           + G VY +G   
Sbjct: 3970 VYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDND 4029

Query: 404  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV 443
             G LG    G ++ + RPR++ +L+   V++++ G  HT+
Sbjct: 4030 EGQLG---DGTTNAIQRPRLVAALQGKKVNRVACGSAHTL 4066



 Score =  122 bits (305), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 82/269 (30%), Positives = 131/269 (48%), Gaps = 6/269 (2%)

Query: 207  PRLVEALKGVPCKQV--TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP 264
            P L+E+++ V  K+V   +G      L+  G V++ G    G+LGHG+      P+ I  
Sbjct: 3780 PTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIES 3839

Query: 265  LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH 324
            L  +  VV +AAG ++   VT  G +Y++G G    LGH +  D+L+P+ ++  +   + 
Sbjct: 3840 LRGI-EVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVV 3898

Query: 325  VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARK 384
             +   +GD   + L     V++WG G  G LG G      +P  + SL     V+V    
Sbjct: 3899 DIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGS 3958

Query: 385  RKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV 444
            + +  L  +G+VY +G   +  LG    G  D V RPR +  L+   V  I+TG  H V 
Sbjct: 3959 QFSVALTKSGAVYTWGKGDYHRLG---HGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 4015

Query: 445  VTDRGRLFGFGDNERAQLGHDTLRGCLEP 473
             T+ G ++ +GDN+  QLG  T      P
Sbjct: 4016 CTEDGEVYTWGDNDEGQLGDGTTNAIQRP 4044



 Score =  115 bits (287), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 92/311 (29%), Positives = 149/311 (47%), Gaps = 24/311 (7%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V Q++ +E     V ++G+V T   NS       DT      P+LV+ L      ++ A 
Sbjct: 430 VTQIACAEKRLLIVXRNGRVXTQAYNS-------DT----LVPQLVQGLASRNVVKIAAH 478

Query: 225 LNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGS-VVQIAAGPS 279
            +   +L +   G V++ G     +LGHGDT+    PK I+    ++ G  VV IA G +
Sbjct: 479 SDGHHYLALAATGEVYSWGCGDGRRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGST 538

Query: 280 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS--AGDEHVVA 337
           Y  A+T  G +Y++G G+   LGHG   DE  P  +     KG+ V+ V+  +GD   +A
Sbjct: 539 YSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGL--KGLKVIDVACGSGDAQTLA 596

Query: 338 LDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVY 397
           +  +G V++WG G  G LG G       P+ +  L+    V+V    + +  L   G VY
Sbjct: 597 VTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVY 656

Query: 398 GFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDN 457
            +G      LG    G  + V  P++L+ L+   V  ++ G  H + +T+   +  +G N
Sbjct: 657 SWGKGDNQRLG---HGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSN 713

Query: 458 ERAQLGHDTLR 468
           ++ Q   DTLR
Sbjct: 714 DQCQ-HFDTLR 723



 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 78/247 (31%), Positives = 126/247 (51%), Gaps = 12/247 (4%)

Query: 235  GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
            G ++  G N  GQLG   G  +  PTP +++A L  V    Q+  G   +LAVT +G +Y
Sbjct: 3704 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPV----QLIGGEQTLLAVTADGKLY 3759

Query: 292  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 351
            + G G+   LG G       P  +++ +   I  V V++G +H +AL S G VY+WG+  
Sbjct: 3760 ATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAE 3819

Query: 352  CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 411
             G LGHG+      P  + SL+    V V A    +  +   G +Y +G   +G LG  D
Sbjct: 3820 DGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD 3879

Query: 412  RGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG 469
               S+  L+P+++++L+ H V  I+  +G   T+ +TD   ++ +GD +  +LG     G
Sbjct: 3880 ---SEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDG 3936

Query: 470  CLEPTEI 476
            C  P +I
Sbjct: 3937 CKVPMKI 3943



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 79/242 (32%), Positives = 114/242 (47%), Gaps = 7/242 (2%)

Query: 119  GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
            GR+ T L  +  VFS G    G LGH      C     I       +  ++   +H+A +
Sbjct: 2808 GRHATALTVDGKVFSWGEGDDGKLGHF-SRMNCDKPRLIEALKTKRIRDIACGSSHSAAL 2866

Query: 179  LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN--FTGFLTIRGH 236
              SG+++T G       GH D N    +P++V+ L G    QV  G     T  LT  G 
Sbjct: 2867 TSSGELYTWGLGEYGRLGHGD-NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 2925

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 296
            V + G    G+LG G +     P++I  L   G V QI  G  + LA+T +GVV+++G G
Sbjct: 2926 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTWGKG 2984

Query: 297  SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 356
              F LGHG      +P+ ++  R  G  +V V+ G  H +A+  SG VY WG    G  G
Sbjct: 2985 DYFRLGHGSDVHVRKPQVVEGLR--GKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQG 3042

Query: 357  HG 358
            +G
Sbjct: 3043 NG 3044



 Score = 94.7 bits (234), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 75/261 (28%), Positives = 120/261 (45%), Gaps = 19/261 (7%)

Query: 117 TTGRYHTLLISNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHVVQVS 169
           + G ++  L +   V+S G      LGHG       P+     S  +    +  HVV ++
Sbjct: 479 SDGHHYLALAATGEVYSWGCGDGRRLGHGDTVPLEEPKVISAFSGKQ----AGKHVVHIA 534

Query: 170 ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
               ++A +   G+++T G  +    GH  +      P LV  LKG+    V  G     
Sbjct: 535 CGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVACGSGDAQ 593

Query: 230 FLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN 287
            L +   G V + G   +G+LG G +    TPK I  L+++  VV++  G  + +A+T +
Sbjct: 594 TLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL-DVVKVRCGSQFSIALTKD 652

Query: 288 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 347
           G VYS+G G N  LGHG +     P+ ++    +G  V+ V+AG  H +AL     V++W
Sbjct: 653 GQVYSWGKGDNQRLGHGTEEHVRYPKLLEGL--QGKKVIDVAAGSTHCLALTEDSEVHSW 710

Query: 348 GKGYCGALGHGDEIDKTLPEP 368
           G        H D +  T PEP
Sbjct: 711 GSN--DQCQHFDTLRVTKPEP 729



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 56/219 (25%), Positives = 98/219 (44%), Gaps = 21/219 (9%)

Query: 271 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 330
           V QIA     +L V  NG V +    S          D L P+ +Q    + +  +   +
Sbjct: 430 VTQIACAEKRLLIVXRNGRVXTQAYNS----------DTLVPQLVQGLASRNVVKIAAHS 479

Query: 331 GDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLA----VQVCARKRK 386
              H +AL ++G VY+WG G    LGHGD +    P+ +S+     A    V +      
Sbjct: 480 DGHHYLALAATGEVYSWGCGDGRRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTY 539

Query: 387 TFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVV 444
           +  +   G +Y +G   +G LG    G S+    P ++  L+   V  ++  +G   T+ 
Sbjct: 540 SAAITAEGELYTWGRGNYGRLG---HGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLA 596

Query: 445 VTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQEMEE 483
           VT+ G+++ +GD +  +LG     GC  P    I+++++
Sbjct: 597 VTENGQVWSWGDGDYGKLGRGGSDGCKTPK--LIEKLQD 633



 Score = 69.7 bits (169), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 77/300 (25%), Positives = 121/300 (40%), Gaps = 64/300 (21%)

Query: 96   FLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFT 155
             L+S++H    ++  A N   + G++   L S   V+S G +  G LGHG   + C    
Sbjct: 3782 LLESIQHV--FIKKVAVN---SGGKHCLALSSEGEVYSWGEAEDGKLGHG-NRSPCDRPR 3835

Query: 156  RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 215
             I       VV V+A   H+A V  +G ++T G       GH D+   + +P+LVEAL+G
Sbjct: 3836 VIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQL-KPKLVEALQG 3894

Query: 216  --------------------------------------------VPCK----------QV 221
                                                        VP K          +V
Sbjct: 3895 HRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKV 3954

Query: 222  TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 281
              G  F+  LT  G V+T G   + +LGHG       P+ +  L+    V+ IA G  + 
Sbjct: 3955 ECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQG-KKVIAIATGSLHC 4013

Query: 282  LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 341
            +  T +G VY++G      LG G  +   +PR +   + K ++  RV+ G  H +A  +S
Sbjct: 4014 VCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVN--RVACGSAHTLAWSTS 4071



 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 66/225 (29%), Positives = 100/225 (44%), Gaps = 8/225 (3%)

Query: 116  ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
            I  G  H+  L S+  +++ G    G LGHG  TTQ +    +       V+QV+     
Sbjct: 2856 IACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQ-LKPKMVKVLLGHRVIQVACGSRD 2914

Query: 175  AA--FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            A    +   G VF+ GD      G R  +     P+ +E L G    Q+  G  F+  LT
Sbjct: 2915 AQTLALTDEGLVFSWGDGDFGKLG-RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALT 2973

Query: 233  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
              G V T G   + +LGHG  +    P+ +  L     +V +A G  + LAVT +G VY+
Sbjct: 2974 KSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRG-KKIVHVAVGALHCLAVTDSGQVYA 3032

Query: 293  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
            +G   +   G+G      +P  +Q    +G  + RV+ G  H VA
Sbjct: 3033 WGDNDHGQQGNGTTTVNRKPTLVQGL--EGQKITRVACGSSHSVA 3075



 Score = 53.1 bits (126), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 51/165 (30%), Positives = 75/165 (45%), Gaps = 8/165 (4%)

Query: 118 TGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
           +G   TL ++ N  V+S G    G LG G  +  C +   I       VV+V      + 
Sbjct: 589 SGDAQTLAVTENGQVWSWGDGDYGKLGRG-GSDGCKTPKLIEKLQDLDVVKVRCGSQFSI 647

Query: 177 FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
            + + GQV++ G   +   GH  T   +  P+L+E L+G     V AG      LT    
Sbjct: 648 ALTKDGQVYSWGKGDNQRLGH-GTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSE 706

Query: 237 VHTCGSNTHGQLGHGDTL--DRPTPKSIAPLEEVGSVVQIAAGPS 279
           VH+ GSN   Q  H DTL   +P P ++  L +   +V IA GP+
Sbjct: 707 VHSWGSNDQCQ--HFDTLRVTKPEPAALPGL-DTKHIVGIACGPA 748



 Score = 50.1 bits (118), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 35/147 (23%), Positives = 70/147 (47%), Gaps = 5/147 (3%)

Query: 332  DEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 391
            D+  ++   SG +Y WG  + G LG  +     +P P  +L +   VQ+   ++    + 
Sbjct: 3694 DDWTLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLLAVT 3753

Query: 392  DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRG 449
              G +Y     G+G+ G    G ++ V  P +L+S++   + +++  +G  H + ++  G
Sbjct: 3754 ADGKLYA---TGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 3810

Query: 450  RLFGFGDNERAQLGHDTLRGCLEPTEI 476
             ++ +G+ E  +LGH     C  P  I
Sbjct: 3811 EVYSWGEAEDGKLGHGNRSPCDRPRVI 3837



 Score = 45.4 bits (106), Expect = 0.066,   Method: Compositional matrix adjust.
 Identities = 45/161 (27%), Positives = 74/161 (45%), Gaps = 14/161 (8%)

Query: 322  GIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG--HGDEID-KTLPEPLSSLKSHLAV 378
            G  + + +AG E    + +   V+ WG      LG   G +I   +  E LS+L     V
Sbjct: 2693 GSLIRKKAAGLESAATIRTK--VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALN---VV 2747

Query: 379  QVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSD-KVLRPRILDSLRAHHVSQIS- 436
            QV    +  F +   G VY  G    G LG    G+S   V  PR + +L ++ V +++ 
Sbjct: 2748 QVAGGSKSLFAVTVEGKVYACGEATNGRLGL---GISSGTVPIPRQITALSSYVVKKVAV 2804

Query: 437  -TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 476
             +G  H   +T  G++F +G+ +  +LGH +   C +P  I
Sbjct: 2805 HSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLI 2845


>gi|229442359|gb|AAI72911.1| hect domain and RLD 2 [synthetic construct]
          Length = 2427

 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 96/328 (29%), Positives = 158/328 (48%), Gaps = 16/328 (4%)

Query: 161 SAAHVVQVSASENHAAFVLQSGQVFTCGD--NSSFCCGHRDTNRPIFRPRLVEALKGVPC 218
           SA +VVQV+        V   G+V+ CG+  N     G      PI  PR + AL     
Sbjct: 583 SALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPI--PRQITALSSYVV 640

Query: 219 KQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA 276
           K+V   +G      LT+ G V + G    G+LGH   ++   P+ I  L+    +  IA 
Sbjct: 641 KKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALK-TKRIRDIAC 699

Query: 277 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEH 334
           G S+  A+T +G +Y++G G    LGHG+   +L+P+ ++     G  V++V+ G  D  
Sbjct: 700 GSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLL--GHRVIQVACGSRDAQ 757

Query: 335 VVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 394
            +AL   G V++WG G  G LG G      +P+ +  L      Q+    + +  L  +G
Sbjct: 758 TLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSG 817

Query: 395 SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 454
            V+ +G   +  LG    G    V +P++++ LR   +  ++ G  H + VTD G+++ +
Sbjct: 818 VVWTWGKGDYFRLG---HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAW 874

Query: 455 GDNERAQLGHDTLRGCLEPTEIFIQEME 482
           GDN+  Q G+ T     +PT   +Q +E
Sbjct: 875 GDNDHGQQGNGTTTVNRKPT--LVQGLE 900



 Score =  125 bits (315), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 93/286 (32%), Positives = 140/286 (48%), Gaps = 10/286 (3%)

Query: 183 QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 242
           +VF  G N     G    ++ I  P   E L  +   QV  G      +T+ G V+ CG 
Sbjct: 553 KVFVWGLNDKDQLGGLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGE 611

Query: 243 NTHGQLGHG-DTLDRPTPKSIAPLEE-VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 300
            T+G+LG G  +   P P+ I  L   V   V + +G  +  A+T +G V+S+G G +  
Sbjct: 612 ATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGK 671

Query: 301 LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 360
           LGH  + +  +PR I+  + K I    ++ G  H  AL SSG +YTWG G  G LGHGD 
Sbjct: 672 LGHFSRMNCDKPRLIEALKTKRIR--DIACGSSHSAALTSSGELYTWGLGEYGRLGHGDN 729

Query: 361 IDKTLPEPLSSLKSHLAVQVC--ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKV 418
             +  P+ +  L  H  +QV   +R  +T  L D G V+ +G   FG LG   RG S+  
Sbjct: 730 TTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLG---RGGSEGC 786

Query: 419 LRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 464
             P+ ++ L    V QI  G   ++ +T  G ++ +G  +  +LGH
Sbjct: 787 NIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGH 832



 Score =  122 bits (306), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 86/280 (30%), Positives = 139/280 (49%), Gaps = 9/280 (3%)

Query: 166  VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 225
            V V++   H   +   G+V++ G+      GH + + P  RPR++E+L+G+    V AG 
Sbjct: 1635 VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRS-PCDRPRVIESLRGIEVVDVAAGG 1693

Query: 226  NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA--AGPSYMLA 283
              +  +T  G ++T G   +G+LGH D+ D+  PK +  L+    VV IA  +G +  L 
Sbjct: 1694 AHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQG-HRVVDIACGSGDAQTLC 1752

Query: 284  VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 343
            +T +  V+S+G G    LG G       P  I +    G+ VV+V  G +  VAL  SG 
Sbjct: 1753 LTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL--TGLGVVKVECGSQFSVALTKSGA 1810

Query: 344  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 403
            VYTWGKG    LGHG +     P  +  L+    + +           + G VY +G   
Sbjct: 1811 VYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDND 1870

Query: 404  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV 443
             G LG    G ++ + RPR++ +L+   V++++ G  HT+
Sbjct: 1871 EGQLG---DGTTNAIQRPRLVAALQGKKVNRVACGSAHTL 1907



 Score =  122 bits (305), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 82/269 (30%), Positives = 131/269 (48%), Gaps = 6/269 (2%)

Query: 207  PRLVEALKGVPCKQV--TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP 264
            P L+E+++ V  K+V   +G      L+  G V++ G    G+LGHG+      P+ I  
Sbjct: 1621 PTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIES 1680

Query: 265  LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH 324
            L  +  VV +AAG ++   VT  G +Y++G G    LGH +  D+L+P+ ++  +   + 
Sbjct: 1681 LRGI-EVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVV 1739

Query: 325  VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARK 384
             +   +GD   + L     V++WG G  G LG G      +P  + SL     V+V    
Sbjct: 1740 DIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGS 1799

Query: 385  RKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV 444
            + +  L  +G+VY +G   +  LG    G  D V RPR +  L+   V  I+TG  H V 
Sbjct: 1800 QFSVALTKSGAVYTWGKGDYHRLG---HGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 1856

Query: 445  VTDRGRLFGFGDNERAQLGHDTLRGCLEP 473
             T+ G ++ +GDN+  QLG  T      P
Sbjct: 1857 CTEDGEVYTWGDNDEGQLGDGTTNAIQRP 1885



 Score =  102 bits (253), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 84/265 (31%), Positives = 126/265 (47%), Gaps = 12/265 (4%)

Query: 96   FLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFT 155
             L+S++H    ++  A N   + G++   L S   V+S G +  G LGHG   + C    
Sbjct: 1623 LLESIQHV--FIKKVAVN---SGGKHCLALSSEGEVYSWGEAEDGKLGHG-NRSPCDRPR 1676

Query: 156  RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 215
             I       VV V+A   H+A V  +G ++T G       GH D+   + +P+LVEAL+G
Sbjct: 1677 VIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQL-KPKLVEALQG 1735

Query: 216  VPCKQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
                 +   +G   T  LT    V + G   +G+LG G +     P  I  L  +G VV+
Sbjct: 1736 HRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLG-VVK 1794

Query: 274  IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
            +  G  + +A+T +G VY++G G    LGHG      +PR +Q    +G  V+ ++ G  
Sbjct: 1795 VECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGL--QGKKVIAIATGSL 1852

Query: 334  HVVALDSSGYVYTWGKGYCGALGHG 358
            H V     G VYTWG    G LG G
Sbjct: 1853 HCVCCTEDGEVYTWGDNDEGQLGDG 1877



 Score =  101 bits (252), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 77/247 (31%), Positives = 125/247 (50%), Gaps = 12/247 (4%)

Query: 235  GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
            G ++  G N  GQLG   G  +  PTP +++A L  V    Q+  G   + AVT +G +Y
Sbjct: 1545 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPV----QLIGGEQTLFAVTADGKLY 1600

Query: 292  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 351
            + G G+   LG G       P  +++ +   I  V V++G +H +AL S G VY+WG+  
Sbjct: 1601 ATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAE 1660

Query: 352  CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 411
             G LGHG+      P  + SL+    V V A    +  +   G +Y +G   +G LG  D
Sbjct: 1661 DGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD 1720

Query: 412  RGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG 469
               S+  L+P+++++L+ H V  I+  +G   T+ +TD   ++ +GD +  +LG     G
Sbjct: 1721 ---SEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDG 1777

Query: 470  CLEPTEI 476
            C  P +I
Sbjct: 1778 CKVPMKI 1784



 Score = 99.8 bits (247), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 79/242 (32%), Positives = 114/242 (47%), Gaps = 7/242 (2%)

Query: 119 GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
           GR+ T L  +  VFS G    G LGH      C     I       +  ++   +H+A +
Sbjct: 649 GRHATALTVDGKVFSWGEGDDGKLGHF-SRMNCDKPRLIEALKTKRIRDIACGSSHSAAL 707

Query: 179 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN--FTGFLTIRGH 236
             SG+++T G       GH D N    +P++V+ L G    QV  G     T  LT  G 
Sbjct: 708 TSSGELYTWGLGEYGRLGHGD-NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 766

Query: 237 VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 296
           V + G    G+LG G +     P++I  L   G V QI  G  + LA+T +GVV+++G G
Sbjct: 767 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTWGKG 825

Query: 297 SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 356
             F LGHG      +P+ ++  R  G  +V V+ G  H +A+  SG VY WG    G  G
Sbjct: 826 DYFRLGHGSDVHVRKPQVVEGLR--GKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQG 883

Query: 357 HG 358
           +G
Sbjct: 884 NG 885



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 66/225 (29%), Positives = 100/225 (44%), Gaps = 8/225 (3%)

Query: 116 ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           I  G  H+  L S+  +++ G    G LGHG  TTQ +    +       V+QV+     
Sbjct: 697 IACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQ-LKPKMVKVLLGHRVIQVACGSRD 755

Query: 175 AA--FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
           A    +   G VF+ GD      G R  +     P+ +E L G    Q+  G  F+  LT
Sbjct: 756 AQTLALTDEGLVFSWGDGDFGKLG-RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALT 814

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
             G V T G   + +LGHG  +    P+ +  L     +V +A G  + LAVT +G VY+
Sbjct: 815 KSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRG-KKIVHVAVGALHCLAVTDSGQVYA 873

Query: 293 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
           +G   +   G+G      +P  +Q    +G  + RV+ G  H VA
Sbjct: 874 WGDNDHGQQGNGTTTVNRKPTLVQGL--EGQKITRVACGSSHSVA 916



 Score = 55.1 bits (131), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 50/167 (29%), Positives = 76/167 (45%), Gaps = 4/167 (2%)

Query: 118  TGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
            +G   TL L  + +V+S G    G LG G  +  C    +I+  +   VV+V      + 
Sbjct: 1745 SGDAQTLCLTDDDTVWSWGDGDYGKLGRG-GSDGCKVPMKIDSLTGLGVVKVECGSQFSV 1803

Query: 177  FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
             + +SG V+T G       GH   +  + RPR V+ L+G     +  G       T  G 
Sbjct: 1804 ALTKSGAVYTWGKGDYHRLGHGSDDH-VRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGE 1862

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
            V+T G N  GQLG G T     P+ +A L+    V ++A G ++ LA
Sbjct: 1863 VYTWGDNDEGQLGDGTTNAIQRPRLVAALQG-KKVNRVACGSAHTLA 1908



 Score = 52.4 bits (124), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 36/147 (24%), Positives = 71/147 (48%), Gaps = 5/147 (3%)

Query: 332  DEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 391
            D+  ++   SG +Y WG  + G LG  +     +P P  +L +   VQ+   ++  F + 
Sbjct: 1535 DDWTLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVT 1594

Query: 392  DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRG 449
              G +Y     G+G+ G    G ++ V  P +L+S++   + +++  +G  H + ++  G
Sbjct: 1595 ADGKLYA---TGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 1651

Query: 450  RLFGFGDNERAQLGHDTLRGCLEPTEI 476
             ++ +G+ E  +LGH     C  P  I
Sbjct: 1652 EVYSWGEAEDGKLGHGNRSPCDRPRVI 1678



 Score = 45.4 bits (106), Expect = 0.070,   Method: Compositional matrix adjust.
 Identities = 41/139 (29%), Positives = 65/139 (46%), Gaps = 12/139 (8%)

Query: 344 VYTWGKGYCGALG--HGDEID-KTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 400
           V+ WG      LG   G +I   +  E LS+L     VQV    +  F +   G VY  G
Sbjct: 554 VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALN---VVQVAGGSKSLFAVTVEGKVYACG 610

Query: 401 WMGFGSLGFPDRGVSD-KVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDN 457
               G LG    G+S   V  PR + +L ++ V +++  +G  H   +T  G++F +G+ 
Sbjct: 611 EATNGRLGL---GISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEG 667

Query: 458 ERAQLGHDTLRGCLEPTEI 476
           +  +LGH +   C +P  I
Sbjct: 668 DDGKLGHFSRMNCDKPRLI 686


>gi|73952408|ref|XP_536160.2| PREDICTED: E3 ubiquitin-protein ligase HERC2 isoform 1 [Canis lupus
            familiaris]
          Length = 4837

 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 96/328 (29%), Positives = 158/328 (48%), Gaps = 16/328 (4%)

Query: 161  SAAHVVQVSASENHAAFVLQSGQVFTCGD--NSSFCCGHRDTNRPIFRPRLVEALKGVPC 218
            SA +VVQV+        V   G+V+ CG+  N     G      PI  PR + AL     
Sbjct: 2991 SALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGLSSGTVPI--PRQITALSSYVV 3048

Query: 219  KQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA 276
            K+V   +G      LT+ G V + G    G+LGH   ++   P+ I  L+    +  IA 
Sbjct: 3049 KKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALK-TKRIRDIAC 3107

Query: 277  GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEH 334
            G S+  A+T +G +Y++G G    LGHG+   +L+P+ ++     G  V++V+ G  D  
Sbjct: 3108 GSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLL--GHRVIQVACGSRDAQ 3165

Query: 335  VVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 394
             +AL   G V++WG G  G LG G      +P+ +  L      Q+    + +  L  +G
Sbjct: 3166 TLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSG 3225

Query: 395  SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 454
             V+ +G   +  LG    G    V +P++++ LR   +  ++ G  H + VTD G+++ +
Sbjct: 3226 VVWTWGKGDYFRLG---HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAW 3282

Query: 455  GDNERAQLGHDTLRGCLEPTEIFIQEME 482
            GDN+  Q G+ T     +PT   +Q +E
Sbjct: 3283 GDNDHGQQGNGTTTVNRKPT--LVQGLE 3308



 Score =  126 bits (316), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 93/286 (32%), Positives = 140/286 (48%), Gaps = 10/286 (3%)

Query: 183  QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 242
            +VF  G N     G    ++ I  P   E L  +   QV  G      +T+ G V+ CG 
Sbjct: 2961 KVFVWGLNDKDQLGGLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGE 3019

Query: 243  NTHGQLGHG-DTLDRPTPKSIAPLEE-VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 300
             T+G+LG G  +   P P+ I  L   V   V + +G  +  A+T +G V+S+G G +  
Sbjct: 3020 ATNGRLGLGLSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGK 3079

Query: 301  LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 360
            LGH  + +  +PR I+  + K I    ++ G  H  AL SSG +YTWG G  G LGHGD 
Sbjct: 3080 LGHFSRMNCDKPRLIEALKTKRIR--DIACGSSHSAALTSSGELYTWGLGEYGRLGHGDN 3137

Query: 361  IDKTLPEPLSSLKSHLAVQVC--ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKV 418
              +  P+ +  L  H  +QV   +R  +T  L D G V+ +G   FG LG   RG S+  
Sbjct: 3138 TTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLG---RGGSEGC 3194

Query: 419  LRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 464
              P+ ++ L    V QI  G   ++ +T  G ++ +G  +  +LGH
Sbjct: 3195 NIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGH 3240



 Score =  122 bits (305), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 83/269 (30%), Positives = 131/269 (48%), Gaps = 6/269 (2%)

Query: 207  PRLVEALKGVPCKQV--TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP 264
            P L+E+++ V  K+V   +G      L+  G V++ G    G+LGHG+      P+ I  
Sbjct: 4031 PTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIES 4090

Query: 265  LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH 324
            L  +  VV +AAG ++   VT  G +Y++G G    LGH +  D+L+P+ ++  +   + 
Sbjct: 4091 LRGI-EVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVV 4149

Query: 325  VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARK 384
             V   +GD   + L     V++WG G  G LG G      +P  + SL     V+V    
Sbjct: 4150 DVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGS 4209

Query: 385  RKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV 444
            + +  L  +G+VY +G   +  LG    G  D V RPR +  L+   V  I+TG  H V 
Sbjct: 4210 QFSVALTKSGAVYTWGKGDYHRLG---HGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 4266

Query: 445  VTDRGRLFGFGDNERAQLGHDTLRGCLEP 473
             T+ G ++ +GDN+  QLG  T      P
Sbjct: 4267 CTEDGEVYTWGDNDEGQLGDGTTNAIQRP 4295



 Score =  122 bits (305), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 85/280 (30%), Positives = 139/280 (49%), Gaps = 9/280 (3%)

Query: 166  VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 225
            V V++   H   +   G+V++ G+      GH + + P  RPR++E+L+G+    V AG 
Sbjct: 4045 VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRS-PCDRPRVIESLRGIEVVDVAAGG 4103

Query: 226  NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA--AGPSYMLA 283
              +  +T  G ++T G   +G+LGH D+ D+  PK +  L+    VV +A  +G +  L 
Sbjct: 4104 AHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQG-HRVVDVACGSGDAQTLC 4162

Query: 284  VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 343
            +T +  V+S+G G    LG G       P  I +    G+ VV+V  G +  VAL  SG 
Sbjct: 4163 LTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL--TGLGVVKVECGSQFSVALTKSGA 4220

Query: 344  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 403
            VYTWGKG    LGHG +     P  +  L+    + +           + G VY +G   
Sbjct: 4221 VYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDND 4280

Query: 404  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV 443
             G LG    G ++ + RPR++ +L+   V++++ G  HT+
Sbjct: 4281 EGQLG---DGTTNAIQRPRLVAALQGKKVNRVACGSAHTL 4317



 Score =  118 bits (295), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 92/311 (29%), Positives = 151/311 (48%), Gaps = 24/311 (7%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V Q++ +E     + ++G+V+T   NS       DT      P+LV+ L      ++ A 
Sbjct: 454 VTQIACAEKRFLILSRNGRVYTQAYNS-------DT----LAPQLVQGLASRNIVKIAAH 502

Query: 225 LNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGS-VVQIAAGPS 279
            +   +L +   G V++ G    G+LGHGDT+    PK I+    ++ G  VV IA G +
Sbjct: 503 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGST 562

Query: 280 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS--AGDEHVVA 337
           Y  A+T  G +Y++G G+   LGHG   DE  P  +     KG+ V+ V+  +GD   +A
Sbjct: 563 YSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGL--KGLKVIDVACGSGDAQTLA 620

Query: 338 LDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVY 397
           +  +G V++WG G  G LG G       P+ +  L+    V+V    + +  L   G VY
Sbjct: 621 VTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVY 680

Query: 398 GFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDN 457
            +G      LG    G  + V  P++L+ L+   V  ++ G  H + +T+   +  +G N
Sbjct: 681 SWGKGDNQRLG---HGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSN 737

Query: 458 ERAQLGHDTLR 468
           ++ Q   DTLR
Sbjct: 738 DQCQ-HFDTLR 747



 Score =  102 bits (255), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 85/265 (32%), Positives = 126/265 (47%), Gaps = 12/265 (4%)

Query: 96   FLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFT 155
             L+S++H    ++  A N   + G++   L S   V+S G +  G LGHG   + C    
Sbjct: 4033 LLESIQHV--FIKKVAVN---SGGKHCLALSSEGEVYSWGEAEDGKLGHG-NRSPCDRPR 4086

Query: 156  RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 215
             I       VV V+A   H+A V  +G ++T G       GH D+   + +P+LVEAL+G
Sbjct: 4087 VIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQL-KPKLVEALQG 4145

Query: 216  VPCKQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
                 V   +G   T  LT    V + G   +G+LG G +     P  I  L  +G VV+
Sbjct: 4146 HRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLG-VVK 4204

Query: 274  IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
            +  G  + +A+T +G VY++G G    LGHG      +PR +Q    +G  V+ ++ G  
Sbjct: 4205 VECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGL--QGKKVIAIATGSL 4262

Query: 334  HVVALDSSGYVYTWGKGYCGALGHG 358
            H V     G VYTWG    G LG G
Sbjct: 4263 HCVCCTEDGEVYTWGDNDEGQLGDG 4287



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 76/247 (30%), Positives = 125/247 (50%), Gaps = 12/247 (4%)

Query: 235  GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
            G ++  G N  GQLG   G  +  PTP +++A L  V    Q+  G   + AVT +G +Y
Sbjct: 3955 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPV----QLIGGEQTLFAVTADGKLY 4010

Query: 292  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 351
            + G G+   LG G       P  +++ +   I  V V++G +H +AL S G VY+WG+  
Sbjct: 4011 ATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAE 4070

Query: 352  CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 411
             G LGHG+      P  + SL+    V V A    +  +   G +Y +G   +G LG  D
Sbjct: 4071 DGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD 4130

Query: 412  RGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG 469
               S+  L+P+++++L+ H V  ++  +G   T+ +TD   ++ +GD +  +LG     G
Sbjct: 4131 ---SEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDG 4187

Query: 470  CLEPTEI 476
            C  P +I
Sbjct: 4188 CKVPMKI 4194



 Score = 99.0 bits (245), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 78/242 (32%), Positives = 114/242 (47%), Gaps = 7/242 (2%)

Query: 119  GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
            GR+ T L  +  VFS G    G LGH      C     I       +  ++   +H+A +
Sbjct: 3057 GRHATALTVDGKVFSWGEGDDGKLGHF-SRMNCDKPRLIEALKTKRIRDIACGSSHSAAL 3115

Query: 179  LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN--FTGFLTIRGH 236
              SG+++T G       GH D N    +P++V+ L G    QV  G     T  LT  G 
Sbjct: 3116 TSSGELYTWGLGEYGRLGHGD-NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 3174

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 296
            V + G    G+LG G +     P++I  L   G V QI  G  + LA+T +GVV+++G G
Sbjct: 3175 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTWGKG 3233

Query: 297  SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 356
              F LGHG      +P+ ++  R  G  +V V+ G  H +A+  +G VY WG    G  G
Sbjct: 3234 DYFRLGHGSDVHVRKPQVVEGLR--GKKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQG 3291

Query: 357  HG 358
            +G
Sbjct: 3292 NG 3293



 Score = 98.2 bits (243), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 88/328 (26%), Positives = 149/328 (45%), Gaps = 26/328 (7%)

Query: 50  PQKFRSLVDLAASQLCALHSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVET 109
           P +   L +L  +Q+      +  +SRN ++    +   +     + +Q +  S +IV+ 
Sbjct: 443 PIQCEGLANLGVTQIACAEKRFLILSRNGRV--YTQAYNSDTLAPQLVQGLA-SRNIVKI 499

Query: 110 SAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSA 162
           +A     + G ++  L +   V+S G    G LGHG       P+     S  +    + 
Sbjct: 500 AAH----SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQ----AG 551

Query: 163 AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 222
            HVV ++    ++A +   G+++T G  +    GH  +      P LV  LKG+    V 
Sbjct: 552 KHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVA 610

Query: 223 AGLNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 280
            G      L +   G V + G   +G+LG G +    TPK I  L+++  VV++  G  +
Sbjct: 611 CGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL-DVVKVRCGSQF 669

Query: 281 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 340
            +A+T +G VYS+G G N  LGHG +     P+ ++    +G  V+ V+AG  H +AL  
Sbjct: 670 SIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGL--QGKKVIDVAAGSTHCLALTE 727

Query: 341 SGYVYTWGKGYCGALGHGDEIDKTLPEP 368
              V++WG        H D +  T PEP
Sbjct: 728 DSEVHSWGSN--DQCQHFDTLRVTKPEP 753



 Score = 76.6 bits (187), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 58/219 (26%), Positives = 100/219 (45%), Gaps = 21/219 (9%)

Query: 271 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 330
           V QIA      L ++ NG VY+    S          D L P+ +Q    + I  +   +
Sbjct: 454 VTQIACAEKRFLILSRNGRVYTQAYNS----------DTLAPQLVQGLASRNIVKIAAHS 503

Query: 331 GDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLA----VQVCARKRK 386
              H +AL ++G VY+WG G  G LGHGD +    P+ +S+     A    V +      
Sbjct: 504 DGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTY 563

Query: 387 TFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVV 444
           +  +   G +Y +G   +G LG    G S+    P ++  L+   V  ++  +G   T+ 
Sbjct: 564 SAAITAEGELYTWGRGNYGRLG---HGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLA 620

Query: 445 VTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQEMEE 483
           VT+ G+++ +GD +  +LG     GC  P    I+++++
Sbjct: 621 VTENGQVWSWGDGDYGKLGRGGSDGCKTPK--LIEKLQD 657



 Score = 66.6 bits (161), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 66/225 (29%), Positives = 99/225 (44%), Gaps = 8/225 (3%)

Query: 116  ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
            I  G  H+  L S+  +++ G    G LGHG  TTQ +    +       V+QV+     
Sbjct: 3105 IACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQ-LKPKMVKVLLGHRVIQVACGSRD 3163

Query: 175  AA--FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            A    +   G VF+ GD      G R  +     P+ +E L G    Q+  G  F+  LT
Sbjct: 3164 AQTLALTDEGLVFSWGDGDFGKLG-RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALT 3222

Query: 233  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
              G V T G   + +LGHG  +    P+ +  L     +V +A G  + LAVT  G VY+
Sbjct: 3223 KSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRG-KKIVHVAVGALHCLAVTDAGQVYA 3281

Query: 293  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
            +G   +   G+G      +P  +Q    +G  + RV+ G  H VA
Sbjct: 3282 WGDNDHGQQGNGTTTVNRKPTLVQGL--EGQKITRVACGSSHSVA 3324



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 50/167 (29%), Positives = 76/167 (45%), Gaps = 4/167 (2%)

Query: 118  TGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
            +G   TL L  + +V+S G    G LG G  +  C    +I+  +   VV+V      + 
Sbjct: 4155 SGDAQTLCLTDDDTVWSWGDGDYGKLGRG-GSDGCKVPMKIDSLTGLGVVKVECGSQFSV 4213

Query: 177  FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
             + +SG V+T G       GH   +  + RPR V+ L+G     +  G       T  G 
Sbjct: 4214 ALTKSGAVYTWGKGDYHRLGHGSDDH-VRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGE 4272

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
            V+T G N  GQLG G T     P+ +A L+    V ++A G ++ LA
Sbjct: 4273 VYTWGDNDEGQLGDGTTNAIQRPRLVAALQG-KKVNRVACGSAHTLA 4318



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 52/169 (30%), Positives = 76/169 (44%), Gaps = 8/169 (4%)

Query: 118 TGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
           +G   TL ++ N  V+S G    G LG G  +  C +   I       VV+V      + 
Sbjct: 613 SGDAQTLAVTENGQVWSWGDGDYGKLGRG-GSDGCKTPKLIEKLQDLDVVKVRCGSQFSI 671

Query: 177 FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
            + + GQV++ G   +   GH  T   +  P+L+E L+G     V AG      LT    
Sbjct: 672 ALTKDGQVYSWGKGDNQRLGH-GTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSE 730

Query: 237 VHTCGSNTHGQLGHGDTL--DRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
           VH+ GSN   Q  H DTL   +P P ++  L +   +V IA GP+   A
Sbjct: 731 VHSWGSNDQCQ--HFDTLRVTKPEPAALPGL-DTKHIVGIACGPAQSFA 776



 Score = 52.0 bits (123), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 36/147 (24%), Positives = 71/147 (48%), Gaps = 5/147 (3%)

Query: 332  DEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 391
            D+  ++   SG +Y WG  + G LG  +     +P P  +L +   VQ+   ++  F + 
Sbjct: 3945 DDWTLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVT 4004

Query: 392  DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRG 449
              G +Y     G+G+ G    G ++ V  P +L+S++   + +++  +G  H + ++  G
Sbjct: 4005 ADGKLYA---TGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 4061

Query: 450  RLFGFGDNERAQLGHDTLRGCLEPTEI 476
             ++ +G+ E  +LGH     C  P  I
Sbjct: 4062 EVYSWGEAEDGKLGHGNRSPCDRPRVI 4088



 Score = 44.7 bits (104), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 41/139 (29%), Positives = 65/139 (46%), Gaps = 12/139 (8%)

Query: 344  VYTWGKGYCGALG--HGDEID-KTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 400
            V+ WG      LG   G +I   +  E LS+L     VQV    +  F +   G VY  G
Sbjct: 2962 VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALN---VVQVAGGSKSLFAVTVEGKVYACG 3018

Query: 401  WMGFGSLGFPDRGVSD-KVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDN 457
                G LG    G+S   V  PR + +L ++ V +++  +G  H   +T  G++F +G+ 
Sbjct: 3019 EATNGRLGL---GLSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEG 3075

Query: 458  ERAQLGHDTLRGCLEPTEI 476
            +  +LGH +   C +P  I
Sbjct: 3076 DDGKLGHFSRMNCDKPRLI 3094


>gi|432118039|gb|ELK37976.1| E3 ubiquitin-protein ligase HERC2 [Myotis davidii]
          Length = 4285

 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 100/340 (29%), Positives = 161/340 (47%), Gaps = 22/340 (6%)

Query: 155  TRINFPS------AAHVVQVSASENHAAFVLQSGQVFTCGD--NSSFCCGHRDTNRPIFR 206
            T I  PS      A +VVQV+        V   G+V+ CG+  N     G      PI  
Sbjct: 2682 TEIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGMSSGTVPI-- 2739

Query: 207  PRLVEALKGVPCKQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP 264
            PR V AL     K+V   +G      LT+ G V + G    G+LGH   ++   P+ I  
Sbjct: 2740 PRQVTALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEA 2799

Query: 265  LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH 324
            L+    +  IA G S+  A+T +G +Y++G G    LGHG+   +L+P+ ++     G  
Sbjct: 2800 LK-TKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLL--GHR 2856

Query: 325  VVRVSAG--DEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCA 382
            V++V+ G  D   +AL   G V++WG G  G LG G      +P+ +  L      Q+  
Sbjct: 2857 VIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNVPQNIERLNGQGVCQIEC 2916

Query: 383  RKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHT 442
              + +  L  +G V+ +G   +  LG    G    V +P++++ LR   +  ++ G  H 
Sbjct: 2917 GAQFSLALTKSGVVWTWGKGDYFRLG---HGSDVHVRKPQVVEGLRGKKIVHVAVGALHC 2973

Query: 443  VVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQEME 482
            + VTD G+++ +GDN+  Q G+ T     +PT   +Q +E
Sbjct: 2974 LAVTDAGQVYAWGDNDHGQQGNGTTTVNRKPT--LVQGLE 3011



 Score =  115 bits (289), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 88/304 (28%), Positives = 149/304 (49%), Gaps = 23/304 (7%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V Q++ +E     + ++G+V+T   NS       DT      P+LV+ L      ++ A 
Sbjct: 454 VTQIACAEKRFLILSRNGRVYTQAYNS-------DT----LAPQLVQGLASRNIVKIAAH 502

Query: 225 LNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGS-VVQIAAGPS 279
            +   +L +   G V++ G    G+LGHGDT+    PK I+    ++ G  VV IA G +
Sbjct: 503 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGST 562

Query: 280 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS--AGDEHVVA 337
           Y  A+T  G +Y++G G+   LGHG   DE  P  +     KG+ V+ V+  +GD   +A
Sbjct: 563 YSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGL--KGLKVIDVACGSGDAQPLA 620

Query: 338 LDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVY 397
           +  +G V++WG G  G LG G       P+ +  L+    V+V    + +  L   G VY
Sbjct: 621 VTDNGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSVALTKDGQVY 680

Query: 398 GFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDN 457
            +G      LG    G  + V  P++L++L+   V  ++ G  H + +T+   +  +G+N
Sbjct: 681 SWGKGDNQRLG---HGTEEHVRYPKLLEALQGKKVIDVAAGSTHCLALTEDSEVHSWGNN 737

Query: 458 ERAQ 461
           ++ Q
Sbjct: 738 DQCQ 741



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 73/245 (29%), Positives = 110/245 (44%), Gaps = 45/245 (18%)

Query: 272  VQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG 331
            V + +G  + LA++  G VYS+G   +  LGHG +    +PR +++ R  G  VV ++AG
Sbjct: 3721 VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVVESLR--GTEVVDIAAG 3778

Query: 332  DEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVC--ARKRKTFV 389
              H   + S+G +YTWGKG  G LGH D  D+  P+ + +L+ H  V V   +   +T  
Sbjct: 3779 GAHSACVTSAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLC 3838

Query: 390  LVDTGSVYGFGWMGFGSLG----------------------------FPD---------- 411
            L D  +V+ +G   +G LG                            +P           
Sbjct: 3839 LTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKVPLSLRVGRPSTPPPSWPRLDVGGKGDYH 3898

Query: 412  ---RGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLR 468
                G  D V RPR +  L+   V  I+TG  H V  T+ G ++ +GDN+  QLG  T  
Sbjct: 3899 RLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEEGEVYTWGDNDEGQLGDGTTN 3958

Query: 469  GCLEP 473
                P
Sbjct: 3959 AIQRP 3963



 Score =  105 bits (263), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 64/203 (31%), Positives = 108/203 (53%), Gaps = 9/203 (4%)

Query: 270 SVVQIAAGPS--YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTF--RRKGIHV 325
           ++V+IAA     + LA+   G VYS+G G    LGHG+     +P+ I  F  ++ G HV
Sbjct: 495 NIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHV 554

Query: 326 VRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVC--AR 383
           V ++ G  +  A+ + G +YTWG+G  G LGHG   D+ +P  ++ LK    + V   + 
Sbjct: 555 VHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSG 614

Query: 384 KRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV 443
             +   + D G V+ +G   +G LG   RG SD    P++++ L+   V ++  G   +V
Sbjct: 615 DAQPLAVTDNGQVWSWGDGDYGKLG---RGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSV 671

Query: 444 VVTDRGRLFGFGDNERAQLGHDT 466
            +T  G+++ +G  +  +LGH T
Sbjct: 672 ALTKDGQVYSWGKGDNQRLGHGT 694



 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 88/324 (27%), Positives = 149/324 (45%), Gaps = 18/324 (5%)

Query: 50  PQKFRSLVDLAASQLCALHSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVET 109
           P + + L +L  +Q+      +  +SRN ++    +   +     + +Q +  S +IV+ 
Sbjct: 443 PIQSKGLANLGVTQIACAEKRFLILSRNGRV--YTQAYNSDTLAPQLVQGLA-SRNIVKI 499

Query: 110 SAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHG---PETTQCVSFTRINFPSAAHVV 166
           +A     + G ++  L +   V+S G    G LGHG   P     V        +  HVV
Sbjct: 500 AAH----SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVV 555

Query: 167 QVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN 226
            ++    ++A +   G+++T G  +    GH  +      P LV  LKG+    V  G  
Sbjct: 556 HIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVACGSG 614

Query: 227 FTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 284
               L +   G V + G   +G+LG G +    TPK I  L+++  VV++  G  + +A+
Sbjct: 615 DAQPLAVTDNGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL-DVVKVRCGSQFSVAL 673

Query: 285 TGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           T +G VYS+G G N  LGHG +     P+ ++    +G  V+ V+AG  H +AL     V
Sbjct: 674 TKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEAL--QGKKVIDVAAGSTHCLALTEDSEV 731

Query: 345 YTWGKGYCGALGHGDEIDKTLPEP 368
           ++WG        H D + +T PEP
Sbjct: 732 HSWGNN--DQCQHFDTLHQTKPEP 753



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 74/247 (29%), Positives = 125/247 (50%), Gaps = 12/247 (4%)

Query: 235  GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
            G ++  G N  GQLG   G  +  PTP +++A L  V    Q+  G   + AVT +G +Y
Sbjct: 3631 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPV----QLIGGEQTLFAVTADGKLY 3686

Query: 292  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 351
            + G G+   LG G       P  +++ +   I  V V++G +H +AL S G VY+WG+  
Sbjct: 3687 ATGYGAGGRLGVGGTESVSAPTLLESIQHVFIRKVAVNSGGKHCLALSSEGEVYSWGEAE 3746

Query: 352  CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 411
             G LGHG+      P  + SL+    V + A    +  +   G +Y +G   +G LG  D
Sbjct: 3747 DGKLGHGNRSPCDRPRVVESLRGTEVVDIAAGGAHSACVTSAGDLYTWGKGRYGRLGHSD 3806

Query: 412  RGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG 469
               S+  L+P+++++L+ H V  ++  +G   T+ +TD   ++ +GD +  +LG     G
Sbjct: 3807 ---SEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDG 3863

Query: 470  CLEPTEI 476
            C  P ++
Sbjct: 3864 CKVPMKV 3870



 Score = 98.2 bits (243), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 78/242 (32%), Positives = 114/242 (47%), Gaps = 7/242 (2%)

Query: 119  GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
            GR+ T L  +  VFS G    G LGH      C     I       +  ++   +H+A +
Sbjct: 2760 GRHATALTVDGKVFSWGEGDDGKLGHF-SRMNCDKPRLIEALKTKRIRDIACGSSHSAAL 2818

Query: 179  LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN--FTGFLTIRGH 236
              SG+++T G       GH D N    +P++V+ L G    QV  G     T  LT  G 
Sbjct: 2819 TSSGELYTWGLGEYGRLGHGD-NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 2877

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 296
            V + G    G+LG G +     P++I  L   G V QI  G  + LA+T +GVV+++G G
Sbjct: 2878 VFSWGDGDFGKLGRGGSEGCNVPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTWGKG 2936

Query: 297  SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 356
              F LGHG      +P+ ++  R  G  +V V+ G  H +A+  +G VY WG    G  G
Sbjct: 2937 DYFRLGHGSDVHVRKPQVVEGLR--GKKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQG 2994

Query: 357  HG 358
            +G
Sbjct: 2995 NG 2996



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 76/281 (27%), Positives = 126/281 (44%), Gaps = 17/281 (6%)

Query: 166  VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 225
            V V++   H   +   G+V++ G+      GH + + P  RPR+VE+L+G     + AG 
Sbjct: 3721 VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRS-PCDRPRVVESLRGTEVVDIAAGG 3779

Query: 226  NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA--AGPSYMLA 283
              +  +T  G ++T G   +G+LGH D+ D+  PK +  L+    VV +A  +G +  L 
Sbjct: 3780 AHSACVTSAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQG-HRVVDVACGSGDAQTLC 3838

Query: 284  VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 343
            +T +  V+S+G G    LG G       P  +    R G    R S        LD    
Sbjct: 3839 LTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKVPLSLRVG----RPSTPPPSWPRLDVG-- 3892

Query: 344  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 403
                GKG    LGHG +     P  +  L+    + +           + G VY +G   
Sbjct: 3893 ----GKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEEGEVYTWGDND 3948

Query: 404  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV 444
             G LG    G ++ + RPR++ +L+   V++++ G  HT+ 
Sbjct: 3949 EGQLG---DGTTNAIQRPRLVAALQGRKVNRVACGSAHTLA 3986



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 61/232 (26%), Positives = 104/232 (44%), Gaps = 25/232 (10%)

Query: 262 IAPLEEVG----SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQT 317
           I P++  G     V QIA      L ++ NG VY+    S          D L P+ +Q 
Sbjct: 441 IGPIQSKGLANLGVTQIACAEKRFLILSRNGRVYTQAYNS----------DTLAPQLVQG 490

Query: 318 FRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLA 377
              + I  +   +   H +AL ++G VY+WG G  G LGHGD +    P+ +S+     A
Sbjct: 491 LASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQA 550

Query: 378 ----VQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVS 433
               V +      +  +   G +Y +G   +G LG    G S+    P ++  L+   V 
Sbjct: 551 GKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLG---HGSSEDEAIPMLVAGLKGLKVI 607

Query: 434 QIS--TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQEMEE 483
            ++  +G    + VTD G+++ +GD +  +LG     GC  P    I+++++
Sbjct: 608 DVACGSGDAQPLAVTDNGQVWSWGDGDYGKLGRGGSDGCKTPK--LIEKLQD 657



 Score = 75.5 bits (184), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 73/249 (29%), Positives = 106/249 (42%), Gaps = 16/249 (6%)

Query: 113  NMQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSAS 171
             + + +G  H L +S+   V+S G +  G LGHG   + C     +       VV ++A 
Sbjct: 3720 KVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHG-NRSPCDRPRVVESLRGTEVVDIAAG 3778

Query: 172  ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT--AGLNFTG 229
              H+A V  +G ++T G       GH D+   + +P+LVEAL+G     V   +G   T 
Sbjct: 3779 GAHSACVTSAGDLYTWGKGRYGRLGHSDSEDQL-KPKLVEALQGHRVVDVACGSGDAQTL 3837

Query: 230  FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 289
             LT    V + G   +G+LG G +     P  +     VG        PS+     G   
Sbjct: 3838 CLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKVPLSLRVGR--PSTPPPSWPRLDVG--- 3892

Query: 290  VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 349
                G G    LGHG      +PR +Q    +G  V+ ++ G  H V     G VYTWG 
Sbjct: 3893 ----GKGDYHRLGHGSDDHVRRPRQVQGL--QGKKVIAIATGSLHCVCCTEEGEVYTWGD 3946

Query: 350  GYCGALGHG 358
               G LG G
Sbjct: 3947 NDEGQLGDG 3955



 Score = 66.2 bits (160), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 66/225 (29%), Positives = 99/225 (44%), Gaps = 8/225 (3%)

Query: 116  ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
            I  G  H+  L S+  +++ G    G LGHG  TTQ +    +       V+QV+     
Sbjct: 2808 IACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQ-LKPKMVKVLLGHRVIQVACGSRD 2866

Query: 175  AA--FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            A    +   G VF+ GD      G R  +     P+ +E L G    Q+  G  F+  LT
Sbjct: 2867 AQTLALTDEGLVFSWGDGDFGKLG-RGGSEGCNVPQNIERLNGQGVCQIECGAQFSLALT 2925

Query: 233  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
              G V T G   + +LGHG  +    P+ +  L     +V +A G  + LAVT  G VY+
Sbjct: 2926 KSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRG-KKIVHVAVGALHCLAVTDAGQVYA 2984

Query: 293  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
            +G   +   G+G      +P  +Q    +G  + RV+ G  H VA
Sbjct: 2985 WGDNDHGQQGNGTTTVNRKPTLVQGL--EGQKITRVACGSSHSVA 3027



 Score = 51.6 bits (122), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 40/170 (23%), Positives = 79/170 (46%), Gaps = 17/170 (10%)

Query: 306  QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTL 365
            +HDE   + +Q   R+          D+  ++   SG +Y WG  + G LG  +     +
Sbjct: 3607 EHDE---QLVQWMNRRP---------DDWTLSAGGSGTIYGWGHNHRGQLGGIEGAKVKV 3654

Query: 366  PEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILD 425
            P P  +L +   VQ+   ++  F +   G +Y     G+G+ G    G ++ V  P +L+
Sbjct: 3655 PTPCEALATLRPVQLIGGEQTLFAVTADGKLYA---TGYGAGGRLGVGGTESVSAPTLLE 3711

Query: 426  SLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEP 473
            S++   + +++  +G  H + ++  G ++ +G+ E  +LGH     C  P
Sbjct: 3712 SIQHVFIRKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRP 3761


>gi|297296008|ref|XP_001109429.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC2-like [Macaca
            mulatta]
          Length = 4840

 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 96/328 (29%), Positives = 158/328 (48%), Gaps = 16/328 (4%)

Query: 161  SAAHVVQVSASENHAAFVLQSGQVFTCGD--NSSFCCGHRDTNRPIFRPRLVEALKGVPC 218
            SA +VVQV+        V   G+V+ CG+  N     G      PI  PR + AL     
Sbjct: 2990 SALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPI--PRQITALSSYVV 3047

Query: 219  KQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA 276
            K+V   +G      LT+ G V + G    G+LGH   ++   P+ I  L+    +  IA 
Sbjct: 3048 KKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALK-TKRIRDIAC 3106

Query: 277  GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEH 334
            G S+  A+T +G +Y++G G    LGHG+   +L+P+ ++     G  V++V+ G  D  
Sbjct: 3107 GSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLL--GHRVIQVACGSRDAQ 3164

Query: 335  VVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 394
             +AL   G V++WG G  G LG G      +P+ +  L      Q+    + +  L  +G
Sbjct: 3165 TLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSG 3224

Query: 395  SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 454
             V+ +G   +  LG    G    V +P++++ LR   +  ++ G  H + VTD G+++ +
Sbjct: 3225 VVWTWGKGDYFRLG---HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAW 3281

Query: 455  GDNERAQLGHDTLRGCLEPTEIFIQEME 482
            GDN+  Q G+ T     +PT   +Q +E
Sbjct: 3282 GDNDHGQQGNGTTTVNRKPT--LVQGLE 3307



 Score =  125 bits (315), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 93/286 (32%), Positives = 140/286 (48%), Gaps = 10/286 (3%)

Query: 183  QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 242
            +VF  G N     G    ++ I  P   E L  +   QV  G      +T+ G V+ CG 
Sbjct: 2960 KVFVWGLNDKDQLGGLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGE 3018

Query: 243  NTHGQLGHG-DTLDRPTPKSIAPLEE-VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 300
             T+G+LG G  +   P P+ I  L   V   V + +G  +  A+T +G V+S+G G +  
Sbjct: 3019 ATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGK 3078

Query: 301  LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 360
            LGH  + +  +PR I+  + K I    ++ G  H  AL SSG +YTWG G  G LGHGD 
Sbjct: 3079 LGHFSRMNCDKPRLIEALKTKRIR--DIACGSSHSAALTSSGELYTWGLGEYGRLGHGDN 3136

Query: 361  IDKTLPEPLSSLKSHLAVQVC--ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKV 418
              +  P+ +  L  H  +QV   +R  +T  L D G V+ +G   FG LG   RG S+  
Sbjct: 3137 TTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLG---RGGSEGC 3193

Query: 419  LRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 464
              P+ ++ L    V QI  G   ++ +T  G ++ +G  +  +LGH
Sbjct: 3194 NIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGH 3239



 Score =  122 bits (306), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 86/280 (30%), Positives = 139/280 (49%), Gaps = 9/280 (3%)

Query: 166  VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 225
            V V++   H   +   G+V++ G+      GH + + P  RPR++E+L+G+    V AG 
Sbjct: 4073 VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRS-PCDRPRVIESLRGIEVVDVAAGG 4131

Query: 226  NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA--AGPSYMLA 283
              +  +T  G ++T G   +G+LGH D+ D+  PK +  L+    VV IA  +G +  L 
Sbjct: 4132 AHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQG-HRVVDIACGSGDAQTLC 4190

Query: 284  VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 343
            +T +  V+S+G G    LG G       P  I +    G+ VV+V  G +  VAL  SG 
Sbjct: 4191 LTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL--TGLGVVKVECGSQFSVALTKSGA 4248

Query: 344  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 403
            VYTWGKG    LGHG +     P  +  L+    + +           + G VY +G   
Sbjct: 4249 VYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDND 4308

Query: 404  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV 443
             G LG    G ++ + RPR++ +L+   V++++ G  HT+
Sbjct: 4309 EGQLG---DGTTNAIQRPRLVAALQGKKVNRVACGSAHTL 4345



 Score =  121 bits (304), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 82/269 (30%), Positives = 131/269 (48%), Gaps = 6/269 (2%)

Query: 207  PRLVEALKGVPCKQV--TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP 264
            P L+E+++ V  K+V   +G      L+  G V++ G    G+LGHG+      P+ I  
Sbjct: 4059 PTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIES 4118

Query: 265  LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH 324
            L  +  VV +AAG ++   VT  G +Y++G G    LGH +  D+L+P+ ++  +   + 
Sbjct: 4119 LRGI-EVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVV 4177

Query: 325  VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARK 384
             +   +GD   + L     V++WG G  G LG G      +P  + SL     V+V    
Sbjct: 4178 DIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGS 4237

Query: 385  RKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV 444
            + +  L  +G+VY +G   +  LG    G  D V RPR +  L+   V  I+TG  H V 
Sbjct: 4238 QFSVALTKSGAVYTWGKGDYHRLG---HGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 4294

Query: 445  VTDRGRLFGFGDNERAQLGHDTLRGCLEP 473
             T+ G ++ +GDN+  QLG  T      P
Sbjct: 4295 CTEDGEVYTWGDNDEGQLGDGTTNAIQRP 4323



 Score =  118 bits (295), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 92/311 (29%), Positives = 151/311 (48%), Gaps = 24/311 (7%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V Q++ +E     + ++G+V+T   NS       DT      P+LV+ L      ++ A 
Sbjct: 453 VTQIACAEKRFLILSRNGRVYTQAYNS-------DT----LAPQLVQGLASRNIVKIAAH 501

Query: 225 LNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGS-VVQIAAGPS 279
            +   +L +   G V++ G    G+LGHGDT+    PK I+    ++ G  VV IA G +
Sbjct: 502 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGST 561

Query: 280 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS--AGDEHVVA 337
           Y  A+T  G +Y++G G+   LGHG   DE  P  +     KG+ V+ V+  +GD   +A
Sbjct: 562 YSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGL--KGLKVIDVACGSGDAQTLA 619

Query: 338 LDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVY 397
           +  +G V++WG G  G LG G       P+ +  L+    V+V    + +  L   G VY
Sbjct: 620 VTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVY 679

Query: 398 GFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDN 457
            +G      LG    G  + V  P++L+ L+   V  ++ G  H + +T+   +  +G N
Sbjct: 680 SWGKGDNQRLG---HGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSN 736

Query: 458 ERAQLGHDTLR 468
           ++ Q   DTLR
Sbjct: 737 DQCQ-HFDTLR 746



 Score =  102 bits (253), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 84/265 (31%), Positives = 126/265 (47%), Gaps = 12/265 (4%)

Query: 96   FLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFT 155
             L+S++H    ++  A N   + G++   L S   V+S G +  G LGHG   + C    
Sbjct: 4061 LLESIQHV--FIKKVAVN---SGGKHCLALSSEGEVYSWGEAEDGKLGHG-NRSPCDRPR 4114

Query: 156  RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 215
             I       VV V+A   H+A V  +G ++T G       GH D+   + +P+LVEAL+G
Sbjct: 4115 VIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQL-KPKLVEALQG 4173

Query: 216  VPCKQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
                 +   +G   T  LT    V + G   +G+LG G +     P  I  L  +G VV+
Sbjct: 4174 HRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLG-VVK 4232

Query: 274  IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
            +  G  + +A+T +G VY++G G    LGHG      +PR +Q    +G  V+ ++ G  
Sbjct: 4233 VECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGL--QGKKVIAIATGSL 4290

Query: 334  HVVALDSSGYVYTWGKGYCGALGHG 358
            H V     G VYTWG    G LG G
Sbjct: 4291 HCVCCTEDGEVYTWGDNDEGQLGDG 4315



 Score =  101 bits (252), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 77/247 (31%), Positives = 125/247 (50%), Gaps = 12/247 (4%)

Query: 235  GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
            G ++  G N  GQLG   G  +  PTP +++A L  V    Q+  G   + AVT +G +Y
Sbjct: 3983 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPV----QLIGGEQTLFAVTADGKLY 4038

Query: 292  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 351
            + G G+   LG G       P  +++ +   I  V V++G +H +AL S G VY+WG+  
Sbjct: 4039 ATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAE 4098

Query: 352  CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 411
             G LGHG+      P  + SL+    V V A    +  +   G +Y +G   +G LG  D
Sbjct: 4099 DGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD 4158

Query: 412  RGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG 469
               S+  L+P+++++L+ H V  I+  +G   T+ +TD   ++ +GD +  +LG     G
Sbjct: 4159 ---SEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDG 4215

Query: 470  CLEPTEI 476
            C  P +I
Sbjct: 4216 CKVPMKI 4222



 Score = 99.8 bits (247), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 79/242 (32%), Positives = 114/242 (47%), Gaps = 7/242 (2%)

Query: 119  GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
            GR+ T L  +  VFS G    G LGH      C     I       +  ++   +H+A +
Sbjct: 3056 GRHATALTVDGKVFSWGEGDDGKLGHF-SRMNCDKPRLIEALKTKRIRDIACGSSHSAAL 3114

Query: 179  LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN--FTGFLTIRGH 236
              SG+++T G       GH D N    +P++V+ L G    QV  G     T  LT  G 
Sbjct: 3115 TSSGELYTWGLGEYGRLGHGD-NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 3173

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 296
            V + G    G+LG G +     P++I  L   G V QI  G  + LA+T +GVV+++G G
Sbjct: 3174 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTWGKG 3232

Query: 297  SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 356
              F LGHG      +P+ ++  R  G  +V V+ G  H +A+  SG VY WG    G  G
Sbjct: 3233 DYFRLGHGSDVHVRKPQVVEGLR--GKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQG 3290

Query: 357  HG 358
            +G
Sbjct: 3291 NG 3292



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 88/328 (26%), Positives = 149/328 (45%), Gaps = 26/328 (7%)

Query: 50  PQKFRSLVDLAASQLCALHSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVET 109
           P +   L +L  +Q+      +  +SRN ++    +   +     + +Q +  S +IV+ 
Sbjct: 442 PIQCEGLANLGVTQIACAEKRFLILSRNGRV--YTQAYNSDTLAPQLVQGLA-SRNIVKI 498

Query: 110 SAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSA 162
           +A     + G ++  L +   V+S G    G LGHG       P+     S  +    + 
Sbjct: 499 AAH----SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQ----AG 550

Query: 163 AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 222
            HVV ++    ++A +   G+++T G  +    GH  +      P LV  LKG+    V 
Sbjct: 551 KHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVA 609

Query: 223 AGLNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 280
            G      L +   G V + G   +G+LG G +    TPK I  L+++  VV++  G  +
Sbjct: 610 CGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL-DVVKVRCGSQF 668

Query: 281 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 340
            +A+T +G VYS+G G N  LGHG +     P+ ++    +G  V+ V+AG  H +AL  
Sbjct: 669 SIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGL--QGKKVIDVAAGSTHCLALTE 726

Query: 341 SGYVYTWGKGYCGALGHGDEIDKTLPEP 368
              V++WG        H D +  T PEP
Sbjct: 727 DSEVHSWGSN--DQCQHFDTLRVTKPEP 752



 Score = 76.6 bits (187), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 58/219 (26%), Positives = 100/219 (45%), Gaps = 21/219 (9%)

Query: 271 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 330
           V QIA      L ++ NG VY+    S          D L P+ +Q    + I  +   +
Sbjct: 453 VTQIACAEKRFLILSRNGRVYTQAYNS----------DTLAPQLVQGLASRNIVKIAAHS 502

Query: 331 GDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLA----VQVCARKRK 386
              H +AL ++G VY+WG G  G LGHGD +    P+ +S+     A    V +      
Sbjct: 503 DGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTY 562

Query: 387 TFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVV 444
           +  +   G +Y +G   +G LG    G S+    P ++  L+   V  ++  +G   T+ 
Sbjct: 563 SAAITAEGELYTWGRGNYGRLG---HGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLA 619

Query: 445 VTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQEMEE 483
           VT+ G+++ +GD +  +LG     GC  P    I+++++
Sbjct: 620 VTENGQVWSWGDGDYGKLGRGGSDGCKTPK--LIEKLQD 656



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 66/225 (29%), Positives = 100/225 (44%), Gaps = 8/225 (3%)

Query: 116  ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
            I  G  H+  L S+  +++ G    G LGHG  TTQ +    +       V+QV+     
Sbjct: 3104 IACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQ-LKPKMVKVLLGHRVIQVACGSRD 3162

Query: 175  AA--FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            A    +   G VF+ GD      G R  +     P+ +E L G    Q+  G  F+  LT
Sbjct: 3163 AQTLALTDEGLVFSWGDGDFGKLG-RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALT 3221

Query: 233  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
              G V T G   + +LGHG  +    P+ +  L     +V +A G  + LAVT +G VY+
Sbjct: 3222 KSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRG-KKIVHVAVGALHCLAVTDSGQVYA 3280

Query: 293  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
            +G   +   G+G      +P  +Q    +G  + RV+ G  H VA
Sbjct: 3281 WGDNDHGQQGNGTTTVNRKPTLVQGL--EGQKITRVACGSSHSVA 3323



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 50/167 (29%), Positives = 76/167 (45%), Gaps = 4/167 (2%)

Query: 118  TGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
            +G   TL L  + +V+S G    G LG G  +  C    +I+  +   VV+V      + 
Sbjct: 4183 SGDAQTLCLTDDDTVWSWGDGDYGKLGRG-GSDGCKVPMKIDSLTGLGVVKVECGSQFSV 4241

Query: 177  FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
             + +SG V+T G       GH   +  + RPR V+ L+G     +  G       T  G 
Sbjct: 4242 ALTKSGAVYTWGKGDYHRLGHGSDDH-VRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGE 4300

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
            V+T G N  GQLG G T     P+ +A L+    V ++A G ++ LA
Sbjct: 4301 VYTWGDNDEGQLGDGTTNAIQRPRLVAALQG-KKVNRVACGSAHTLA 4346



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 52/169 (30%), Positives = 76/169 (44%), Gaps = 8/169 (4%)

Query: 118 TGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
           +G   TL ++ N  V+S G    G LG G  +  C +   I       VV+V      + 
Sbjct: 612 SGDAQTLAVTENGQVWSWGDGDYGKLGRG-GSDGCKTPKLIEKLQDLDVVKVRCGSQFSI 670

Query: 177 FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
            + + GQV++ G   +   GH  T   +  P+L+E L+G     V AG      LT    
Sbjct: 671 ALTKDGQVYSWGKGDNQRLGH-GTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSE 729

Query: 237 VHTCGSNTHGQLGHGDTL--DRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
           VH+ GSN   Q  H DTL   +P P ++  L +   +V IA GP+   A
Sbjct: 730 VHSWGSNDQCQ--HFDTLRVTKPEPAALPGL-DTKHIVGIACGPAQSFA 775



 Score = 52.4 bits (124), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 36/147 (24%), Positives = 71/147 (48%), Gaps = 5/147 (3%)

Query: 332  DEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 391
            D+  ++   SG +Y WG  + G LG  +     +P P  +L +   VQ+   ++  F + 
Sbjct: 3973 DDWTLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVT 4032

Query: 392  DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRG 449
              G +Y     G+G+ G    G ++ V  P +L+S++   + +++  +G  H + ++  G
Sbjct: 4033 ADGKLYA---TGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 4089

Query: 450  RLFGFGDNERAQLGHDTLRGCLEPTEI 476
             ++ +G+ E  +LGH     C  P  I
Sbjct: 4090 EVYSWGEAEDGKLGHGNRSPCDRPRVI 4116



 Score = 45.4 bits (106), Expect = 0.063,   Method: Compositional matrix adjust.
 Identities = 45/161 (27%), Positives = 74/161 (45%), Gaps = 14/161 (8%)

Query: 322  GIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG--HGDEID-KTLPEPLSSLKSHLAV 378
            G  + + +AG E    + +   V+ WG      LG   G +I   +  E LS+L     V
Sbjct: 2941 GSLIRKKAAGLESAATIRTK--VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALN---VV 2995

Query: 379  QVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSD-KVLRPRILDSLRAHHVSQIS- 436
            QV    +  F +   G VY  G    G LG    G+S   V  PR + +L ++ V +++ 
Sbjct: 2996 QVAGGSKSLFAVTVEGKVYACGEATNGRLGL---GISSGTVPIPRQITALSSYVVKKVAV 3052

Query: 437  -TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 476
             +G  H   +T  G++F +G+ +  +LGH +   C +P  I
Sbjct: 3053 HSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLI 3093


>gi|410048912|ref|XP_003952667.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
            HERC2-like [Pan troglodytes]
          Length = 4776

 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 96/328 (29%), Positives = 158/328 (48%), Gaps = 16/328 (4%)

Query: 161  SAAHVVQVSASENHAAFVLQSGQVFTCGD--NSSFCCGHRDTNRPIFRPRLVEALKGVPC 218
            SA +VVQV+        V   G+V+ CG+  N     G      PI  PR + AL     
Sbjct: 2983 SALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPI--PRQITALSSYVV 3040

Query: 219  KQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA 276
            K+V   +G      LT+ G V + G    G+LGH   ++   P+ I  L+    +  IA 
Sbjct: 3041 KKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALK-TKRIRDIAC 3099

Query: 277  GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEH 334
            G S+  A+T +G +Y++G G    LGHG+   +L+P+ ++     G  V++V+ G  D  
Sbjct: 3100 GSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLL--GHRVIQVACGSRDAQ 3157

Query: 335  VVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 394
             +AL   G V++WG G  G LG G      +P+ +  L      Q+    + +  L  +G
Sbjct: 3158 TLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSG 3217

Query: 395  SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 454
             V+ +G   +  LG    G    V +P++++ LR   +  ++ G  H + VTD G+++ +
Sbjct: 3218 VVWTWGKGDYFRLG---HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAW 3274

Query: 455  GDNERAQLGHDTLRGCLEPTEIFIQEME 482
            GDN+  Q G+ T     +PT   +Q +E
Sbjct: 3275 GDNDHGQQGNGTTTVNRKPT--LVQGLE 3300



 Score =  126 bits (316), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 93/286 (32%), Positives = 140/286 (48%), Gaps = 10/286 (3%)

Query: 183  QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 242
            +VF  G N     G    ++ I  P   E L  +   QV  G      +T+ G V+ CG 
Sbjct: 2953 KVFVWGLNDKDQLGGLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGE 3011

Query: 243  NTHGQLGHG-DTLDRPTPKSIAPLEE-VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 300
             T+G+LG G  +   P P+ I  L   V   V + +G  +  A+T +G V+S+G G +  
Sbjct: 3012 ATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGK 3071

Query: 301  LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 360
            LGH  + +  +PR I+  + K I    ++ G  H  AL SSG +YTWG G  G LGHGD 
Sbjct: 3072 LGHFSRMNCDKPRLIEALKTKRIR--DIACGSSHSAALTSSGELYTWGLGEYGRLGHGDN 3129

Query: 361  IDKTLPEPLSSLKSHLAVQVC--ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKV 418
              +  P+ +  L  H  +QV   +R  +T  L D G V+ +G   FG LG   RG S+  
Sbjct: 3130 TTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLG---RGGSEGC 3186

Query: 419  LRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 464
              P+ ++ L    V QI  G   ++ +T  G ++ +G  +  +LGH
Sbjct: 3187 NIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGH 3232



 Score =  122 bits (306), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 86/280 (30%), Positives = 139/280 (49%), Gaps = 9/280 (3%)

Query: 166  VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 225
            V V++   H   +   G+V++ G+      GH + + P  RPR++E+L+G+    V AG 
Sbjct: 3984 VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRS-PCDRPRVIESLRGIEVVDVAAGG 4042

Query: 226  NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA--AGPSYMLA 283
              +  +T  G ++T G   +G+LGH D+ D+  PK +  L+    VV IA  +G +  L 
Sbjct: 4043 AHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQG-HRVVDIACGSGDAQTLC 4101

Query: 284  VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 343
            +T +  V+S+G G    LG G       P  I +    G+ VV+V  G +  VAL  SG 
Sbjct: 4102 LTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL--TGLGVVKVECGSQFSVALTKSGA 4159

Query: 344  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 403
            VYTWGKG    LGHG +     P  +  L+    + +           + G VY +G   
Sbjct: 4160 VYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDND 4219

Query: 404  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV 443
             G LG    G ++ + RPR++ +L+   V++++ G  HT+
Sbjct: 4220 EGQLG---DGTTNAIQRPRLVAALQGKKVNRVACGSAHTL 4256



 Score =  121 bits (304), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 82/269 (30%), Positives = 131/269 (48%), Gaps = 6/269 (2%)

Query: 207  PRLVEALKGVPCKQV--TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP 264
            P L+E+++ V  K+V   +G      L+  G V++ G    G+LGHG+      P+ I  
Sbjct: 3970 PTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIES 4029

Query: 265  LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH 324
            L  +  VV +AAG ++   VT  G +Y++G G    LGH +  D+L+P+ ++  +   + 
Sbjct: 4030 LRGI-EVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVV 4088

Query: 325  VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARK 384
             +   +GD   + L     V++WG G  G LG G      +P  + SL     V+V    
Sbjct: 4089 DIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGS 4148

Query: 385  RKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV 444
            + +  L  +G+VY +G   +  LG    G  D V RPR +  L+   V  I+TG  H V 
Sbjct: 4149 QFSVALTKSGAVYTWGKGDYHRLG---HGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 4205

Query: 445  VTDRGRLFGFGDNERAQLGHDTLRGCLEP 473
             T+ G ++ +GDN+  QLG  T      P
Sbjct: 4206 CTEDGEVYTWGDNDEGQLGDGTTNAIQRP 4234



 Score =  118 bits (295), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 92/311 (29%), Positives = 151/311 (48%), Gaps = 24/311 (7%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V Q++ +E     + ++G+V+T   NS       DT      P+LV+ L      ++ A 
Sbjct: 453 VTQIACAEKRFLILSRNGRVYTQAYNS-------DT----LAPQLVQGLASRNIVKIAAH 501

Query: 225 LNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGS-VVQIAAGPS 279
            +   +L +   G V++ G    G+LGHGDT+    PK I+    ++ G  VV IA G +
Sbjct: 502 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGST 561

Query: 280 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS--AGDEHVVA 337
           Y  A+T  G +Y++G G+   LGHG   DE  P  +     KG+ V+ V+  +GD   +A
Sbjct: 562 YSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGL--KGLKVIDVACGSGDAQTLA 619

Query: 338 LDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVY 397
           +  +G V++WG G  G LG G       P+ +  L+    V+V    + +  L   G VY
Sbjct: 620 VTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVY 679

Query: 398 GFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDN 457
            +G      LG    G  + V  P++L+ L+   V  ++ G  H + +T+   +  +G N
Sbjct: 680 SWGKGDNQRLG---HGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSN 736

Query: 458 ERAQLGHDTLR 468
           ++ Q   DTLR
Sbjct: 737 DQCQ-HFDTLR 746



 Score =  102 bits (254), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 84/265 (31%), Positives = 126/265 (47%), Gaps = 12/265 (4%)

Query: 96   FLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFT 155
             L+S++H    ++  A N   + G++   L S   V+S G +  G LGHG   + C    
Sbjct: 3972 LLESIQHV--FIKKVAVN---SGGKHCLALSSEGEVYSWGEAEDGKLGHG-NRSPCDRPR 4025

Query: 156  RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 215
             I       VV V+A   H+A V  +G ++T G       GH D+   + +P+LVEAL+G
Sbjct: 4026 VIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQL-KPKLVEALQG 4084

Query: 216  VPCKQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
                 +   +G   T  LT    V + G   +G+LG G +     P  I  L  +G VV+
Sbjct: 4085 HRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLG-VVK 4143

Query: 274  IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
            +  G  + +A+T +G VY++G G    LGHG      +PR +Q    +G  V+ ++ G  
Sbjct: 4144 VECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGL--QGKKVIAIATGSL 4201

Query: 334  HVVALDSSGYVYTWGKGYCGALGHG 358
            H V     G VYTWG    G LG G
Sbjct: 4202 HCVCCTEDGEVYTWGDNDEGQLGDG 4226



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 79/242 (32%), Positives = 114/242 (47%), Gaps = 7/242 (2%)

Query: 119  GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
            GR+ T L  +  VFS G    G LGH      C     I       +  ++   +H+A +
Sbjct: 3049 GRHATALTVDGKVFSWGEGDDGKLGHF-SRMNCDKPRLIEALKTKRIRDIACGSSHSAAL 3107

Query: 179  LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN--FTGFLTIRGH 236
              SG+++T G       GH D N    +P++V+ L G    QV  G     T  LT  G 
Sbjct: 3108 TSSGELYTWGLGEYGRLGHGD-NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 3166

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 296
            V + G    G+LG G +     P++I  L   G V QI  G  + LA+T +GVV+++G G
Sbjct: 3167 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTWGKG 3225

Query: 297  SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 356
              F LGHG      +P+ ++  R  G  +V V+ G  H +A+  SG VY WG    G  G
Sbjct: 3226 DYFRLGHGSDVHVRKPQVVEGLR--GKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQG 3283

Query: 357  HG 358
            +G
Sbjct: 3284 NG 3285



 Score = 98.2 bits (243), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 88/328 (26%), Positives = 149/328 (45%), Gaps = 26/328 (7%)

Query: 50  PQKFRSLVDLAASQLCALHSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVET 109
           P +   L +L  +Q+      +  +SRN ++    +   +     + +Q +  S +IV+ 
Sbjct: 442 PIQCEGLANLGVTQIACAEKRFLILSRNGRV--YTQAYNSDTLAPQLVQGLA-SRNIVKI 498

Query: 110 SAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSA 162
           +A     + G ++  L +   V+S G    G LGHG       P+     S  +    + 
Sbjct: 499 AAH----SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQ----AG 550

Query: 163 AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 222
            HVV ++    ++A +   G+++T G  +    GH  +      P LV  LKG+    V 
Sbjct: 551 KHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVA 609

Query: 223 AGLNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 280
            G      L +   G V + G   +G+LG G +    TPK I  L+++  VV++  G  +
Sbjct: 610 CGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL-DVVKVRCGSQF 668

Query: 281 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 340
            +A+T +G VYS+G G N  LGHG +     P+ ++    +G  V+ V+AG  H +AL  
Sbjct: 669 SIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGL--QGKKVIDVAAGSTHCLALTE 726

Query: 341 SGYVYTWGKGYCGALGHGDEIDKTLPEP 368
              V++WG        H D +  T PEP
Sbjct: 727 DSEVHSWGSN--DQCQHFDTLRVTKPEP 752



 Score = 83.2 bits (204), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 51/167 (30%), Positives = 87/167 (52%), Gaps = 5/167 (2%)

Query: 312  PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSS 371
            P  +++ +   I  V V++G +H +AL S G VY+WG+   G LGHG+      P  + S
Sbjct: 3970 PTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIES 4029

Query: 372  LKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHH 431
            L+    V V A    +  +   G +Y +G   +G LG  D   S+  L+P+++++L+ H 
Sbjct: 4030 LRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD---SEDQLKPKLVEALQGHR 4086

Query: 432  VSQIS--TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 476
            V  I+  +G   T+ +TD   ++ +GD +  +LG     GC  P +I
Sbjct: 4087 VVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKI 4133



 Score = 76.6 bits (187), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 58/219 (26%), Positives = 100/219 (45%), Gaps = 21/219 (9%)

Query: 271 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 330
           V QIA      L ++ NG VY+    S          D L P+ +Q    + I  +   +
Sbjct: 453 VTQIACAEKRFLILSRNGRVYTQAYNS----------DTLAPQLVQGLASRNIVKIAAHS 502

Query: 331 GDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLA----VQVCARKRK 386
              H +AL ++G VY+WG G  G LGHGD +    P+ +S+     A    V +      
Sbjct: 503 DGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTY 562

Query: 387 TFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVV 444
           +  +   G +Y +G   +G LG    G S+    P ++  L+   V  ++  +G   T+ 
Sbjct: 563 SAAITAEGELYTWGRGNYGRLG---HGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLA 619

Query: 445 VTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQEMEE 483
           VT+ G+++ +GD +  +LG     GC  P    I+++++
Sbjct: 620 VTENGQVWSWGDGDYGKLGRGGSDGCKTPK--LIEKLQD 656



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 66/225 (29%), Positives = 100/225 (44%), Gaps = 8/225 (3%)

Query: 116  ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
            I  G  H+  L S+  +++ G    G LGHG  TTQ +    +       V+QV+     
Sbjct: 3097 IACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQ-LKPKMVKVLLGHRVIQVACGSRD 3155

Query: 175  AA--FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            A    +   G VF+ GD      G R  +     P+ +E L G    Q+  G  F+  LT
Sbjct: 3156 AQTLALTDEGLVFSWGDGDFGKLG-RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALT 3214

Query: 233  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
              G V T G   + +LGHG  +    P+ +  L     +V +A G  + LAVT +G VY+
Sbjct: 3215 KSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRG-KKIVHVAVGALHCLAVTDSGQVYA 3273

Query: 293  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
            +G   +   G+G      +P  +Q    +G  + RV+ G  H VA
Sbjct: 3274 WGDNDHGQQGNGTTTVNRKPTLVQGL--EGQKITRVACGSSHSVA 3316



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 52/169 (30%), Positives = 76/169 (44%), Gaps = 8/169 (4%)

Query: 118 TGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
           +G   TL ++ N  V+S G    G LG G  +  C +   I       VV+V      + 
Sbjct: 612 SGDAQTLAVTENGQVWSWGDGDYGKLGRG-GSDGCKTPKLIEKLQDLDVVKVRCGSQFSI 670

Query: 177 FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
            + + GQV++ G   +   GH  T   +  P+L+E L+G     V AG      LT    
Sbjct: 671 ALTKDGQVYSWGKGDNQRLGH-GTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSE 729

Query: 237 VHTCGSNTHGQLGHGDTL--DRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
           VH+ GSN   Q  H DTL   +P P ++  L +   +V IA GP+   A
Sbjct: 730 VHSWGSNDQCQ--HFDTLRVTKPEPAALPGL-DTKHIVGIACGPAQSFA 775



 Score = 45.4 bits (106), Expect = 0.063,   Method: Compositional matrix adjust.
 Identities = 45/161 (27%), Positives = 74/161 (45%), Gaps = 14/161 (8%)

Query: 322  GIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG--HGDEID-KTLPEPLSSLKSHLAV 378
            G  + + +AG E    + +   V+ WG      LG   G +I   +  E LS+L     V
Sbjct: 2934 GSLIRKKAAGLESAATIRTK--VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALN---VV 2988

Query: 379  QVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSD-KVLRPRILDSLRAHHVSQIS- 436
            QV    +  F +   G VY  G    G LG    G+S   V  PR + +L ++ V +++ 
Sbjct: 2989 QVAGGSKSLFAVTVEGKVYACGEATNGRLGL---GISSGTVPIPRQITALSSYVVKKVAV 3045

Query: 437  -TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 476
             +G  H   +T  G++F +G+ +  +LGH +   C +P  I
Sbjct: 3046 HSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLI 3086


>gi|395501386|ref|XP_003755076.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 3
           [Sarcophilus harrisii]
          Length = 979

 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 109/333 (32%), Positives = 156/333 (46%), Gaps = 13/333 (3%)

Query: 135 GSSLCGVLGHGPETTQCVSFTRI-NFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSF 193
           G++  G LG G    + V   R  +F     V  V     H  FVL  G V+TCG N   
Sbjct: 5   GNASFGQLGLGGIDEEIVLEPRKSDFFINKKVQDVGCGLRHTVFVLDDGTVYTCGCNDLG 64

Query: 194 CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDT 253
             GH  + +   +P  V AL       V+ G   T  L  +G V+  G +T GQLG   T
Sbjct: 65  QLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDTDGQLGLPGT 121

Query: 254 LDR-PTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHG-EQHDELQ 311
            +    P++I  L ++  +VQIA G  + LA++    V+S+G   +  LG G E   +  
Sbjct: 122 EEYIRVPRNIKSLTDI-QIVQIACGYYHSLALSKGSEVFSWGQNKHGQLGLGFELKRQSS 180

Query: 312 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSS 371
           P+ I++    GI   +V+AG  H   L  SG ++ WG+   G LG  DE D+ +P  L S
Sbjct: 181 PQLIKSLL--GIPFTQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRFVPNLLKS 238

Query: 372 LKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHH 431
           L+S   V +C  +  T  L   G V+ FG  G+G LG      +   + PR +  L    
Sbjct: 239 LRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG---HNSTSHEINPRKVFELMGSI 295

Query: 432 VSQISTGLYHT-VVVTDRGRLFGFGDNERAQLG 463
           V+QI+ G  HT   V   GR++ FG     QLG
Sbjct: 296 VTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  125 bits (314), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 86/276 (31%), Positives = 143/276 (51%), Gaps = 10/276 (3%)

Query: 204 IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 263
           +  PR  +       + V  GL  T F+   G V+TCG N  GQLGH  +  R  P+ + 
Sbjct: 22  VLEPRKSDFFINKKVQDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKS--RKKPEQVV 79

Query: 264 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQ-PRAIQTFRRKG 322
            L+   ++V ++ G ++ LA+   G VY++G  ++  LG     + ++ PR I++     
Sbjct: 80  ALD-AQNIVAVSCGEAHTLALNDKGQVYAWGLDTDGQLGLPGTEEYIRVPRNIKSL--TD 136

Query: 323 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK-TLPEPLSSLKSHLAVQVC 381
           I +V+++ G  H +AL     V++WG+   G LG G E+ + + P+ + SL      QV 
Sbjct: 137 IQIVQIACGYYHSLALSKGSEVFSWGQNKHGQLGLGFELKRQSSPQLIKSLLGIPFTQVA 196

Query: 382 ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYH 441
           A    +FVL  +G+++G+G   FG LG  D   +D+ + P +L SLR+  +  I  G  H
Sbjct: 197 AGGAHSFVLTLSGAIFGWGRNKFGQLGLNDE--NDRFV-PNLLKSLRSQKIVYICCGEDH 253

Query: 442 TVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF 477
           T  +T  G +F FG     QLGH++    + P ++F
Sbjct: 254 TAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVF 289



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 81/291 (27%), Positives = 138/291 (47%), Gaps = 8/291 (2%)

Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 179
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V VS  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVSCGEAHTLALN 100

Query: 180 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 239
             GQV+  G ++    G   T   I  PR +++L  +   Q+  G   +  L+    V +
Sbjct: 101 DKGQVYAWGLDTDGQLGLPGTEEYIRVPRNIKSLTDIQIVQIACGYYHSLALSKGSEVFS 160

Query: 240 CGSNTHGQLGHGDTLDR-PTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
            G N HGQLG G  L R  +P+ I  L  +    Q+AAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKHGQLGLGFELKRQSSPQLIKSLLGI-PFTQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 299 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 358
             LG  +++D   P  +++ R + I  V +  G++H  AL   G V+T+G G  G LGH 
Sbjct: 220 GQLGLNDENDRFVPNLLKSLRSQKI--VYICCGEDHTAALTKEGGVFTFGAGGYGQLGHN 277

Query: 359 DEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLG 408
               +  P  +  L   +  Q+ C R+  +  +  +G +Y FG  G G LG
Sbjct: 278 STSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 81/273 (29%), Positives = 131/273 (47%), Gaps = 8/273 (2%)

Query: 98  QSVEHSSDIVETSAGNM-QITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFT 155
           +S +    +V   A N+  ++ G  HTL +++   V++ G    G LG  P T + +   
Sbjct: 70  KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDTDGQLGL-PGTEEYIRVP 128

Query: 156 R-INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALK 214
           R I   +   +VQ++    H+  + +  +VF+ G N     G     +    P+L+++L 
Sbjct: 129 RNIKSLTDIQIVQIACGYYHSLALSKGSEVFSWGQNKHGQLGLGFELKRQSSPQLIKSLL 188

Query: 215 GVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQI 274
           G+P  QV AG   +  LT+ G +   G N  GQLG  D  DR  P  +  L     +V I
Sbjct: 189 GIPFTQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRFVPNLLKSLRS-QKIVYI 247

Query: 275 AAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEH 334
             G  +  A+T  G V++FG+G    LGH     E+ PR +  F   G  V +++ G +H
Sbjct: 248 CCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQH 305

Query: 335 VVA-LDSSGYVYTWGKGYCGALGHGDEIDKTLP 366
             A + SSG +Y++G G  G LG G   ++  P
Sbjct: 306 TSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338



 Score = 82.8 bits (203), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 71/206 (34%), Positives = 98/206 (47%), Gaps = 6/206 (2%)

Query: 114 MQITTGRYHTLLISN-SSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +QI  G YH+L +S  S VFS G +  G LG G E  +  S   I         QV+A  
Sbjct: 140 VQIACGYYHSLALSKGSEVFSWGQNKHGQLGLGFELKRQSSPQLIKSLLGIPFTQVAAGG 199

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            H+  +  SG +F  G N     G  D N   F P L+++L+      +  G + T  LT
Sbjct: 200 AHSFVLTLSGAIFGWGRNKFGQLGLNDENDR-FVPNLLKSLRSQKIVYICCGEDHTAALT 258

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVV 290
             G V T G+  +GQLGH  T     P+ +   E +GS+V QIA G  +  A V  +G +
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRI 316

Query: 291 YSFGSGSNFCLGHGEQHDELQPRAIQ 316
           YSFG G N  LG G   +   P  ++
Sbjct: 317 YSFGLGGNGQLGTGSTSNRKSPFTVK 342



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 54/217 (24%), Positives = 98/217 (45%), Gaps = 7/217 (3%)

Query: 50  PQKFRSLVDLAASQLCALHSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVET 109
           P+  +SL D+   Q+   +     +S+  ++    + N + +  L F    + S  ++++
Sbjct: 128 PRNIKSLTDIQIVQIACGYYHSLALSKGSEVFSWGQ-NKHGQLGLGFELKRQSSPQLIKS 186

Query: 110 SAG--NMQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVV 166
             G    Q+  G  H+ +++ S ++F  G +  G LG   E  + V    +    +  +V
Sbjct: 187 LLGIPFTQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRFVP-NLLKSLRSQKIV 245

Query: 167 QVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN 226
            +   E+H A + + G VFT G       GH  T+  I  PR V  L G    Q+  G  
Sbjct: 246 YICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI-NPRKVFELMGSIVTQIACGRQ 304

Query: 227 FT-GFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSI 262
            T  F+   G +++ G   +GQLG G T +R +P ++
Sbjct: 305 HTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341


>gi|384245912|gb|EIE19404.1| RCC1/BLIP-II [Coccomyxa subellipsoidea C-169]
          Length = 598

 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 103/359 (28%), Positives = 162/359 (45%), Gaps = 24/359 (6%)

Query: 129 SSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQS 181
           SS+++ G S  G  G G       PE  Q +            VV  +    ++AFV + 
Sbjct: 37  SSLYTWGRSDLGQTGSGRDQNSTAPEPVQALQ--------GKDVVHAAGGSYNSAFVTRD 88

Query: 182 GQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCG 241
           G+++T G N +   G +        P  V AL+      V  G      +   GH+   G
Sbjct: 89  GELYTTGSNDARQLGVKG-REVALEPIRVSALEMNNVHGVACGQGHMLAVVDNGHLAAWG 147

Query: 242 SNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCL 301
           SN +GQLG G+         +          ++AAG ++ LA+T +G VYSFG GS   L
Sbjct: 148 SNEYGQLGTGEVGASAAQPRVLKRIRGAHFARVAAGATHSLALTSSGQVYSFGEGSFGAL 207

Query: 302 GHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEI 361
           GHG+ ++  +P  +Q    + I  V ++AG+    A+  SG V+TWG+   G LG+G+  
Sbjct: 208 GHGDVNNRAKPTLVQALWPEAI--VSIAAGEYFSAAVSLSGRVFTWGRNKYGQLGNGEFG 265

Query: 362 DKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLG----FPDRGVSDK 417
           +  LP+P+  ++   AVQV         L   G VY +G    G LG         ++  
Sbjct: 266 NAFLPQPVPGIEQ--AVQVACGDHHCIALTRWGEVYTWGLHSSGQLGQGSNLGSEALNGC 323

Query: 418 VLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 476
           +  P  +DSL    + Q+S G  H+  V+   +L+G G N+  QL   ++     PT +
Sbjct: 324 LCSPSRVDSLADQSIRQVSAGARHSFFVSPGEQLWGAGANDEGQLALQSVPSVALPTRV 382



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 81/300 (27%), Positives = 135/300 (45%), Gaps = 16/300 (5%)

Query: 119 GRYHTLLIS-NSSVFSCGSSLCGVLG-HGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
           G Y++  ++ +  +++ GS+    LG  G E    +   R++     +V  V+  + H  
Sbjct: 78  GSYNSAFVTRDGELYTTGSNDARQLGVKGREV--ALEPIRVSALEMNNVHGVACGQGHML 135

Query: 177 FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
            V+ +G +   G N     G  +      +PR+++ ++G    +V AG   +  LT  G 
Sbjct: 136 AVVDNGHLAAWGSNEYGQLGTGEVGASAAQPRVLKRIRGAHFARVAAGATHSLALTSSGQ 195

Query: 237 VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 296
           V++ G  + G LGHGD  +R  P  +  L    ++V IAAG  +  AV+ +G V+++G  
Sbjct: 196 VYSFGEGSFGALGHGDVNNRAKPTLVQALWPE-AIVSIAAGEYFSAAVSLSGRVFTWGRN 254

Query: 297 SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 356
               LG+GE  +   P+ +    +     V+V+ GD H +AL   G VYTWG    G LG
Sbjct: 255 KYGQLGNGEFGNAFLPQPVPGIEQ----AVQVACGDHHCIALTRWGEVYTWGLHSSGQLG 310

Query: 357 HGDEIDKTL-------PEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGF 409
            G  +           P  + SL      QV A  R +F +     ++G G    G L  
Sbjct: 311 QGSNLGSEALNGCLCSPSRVDSLADQSIRQVSAGARHSFFVSPGEQLWGAGANDEGQLAL 370



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 59/228 (25%), Positives = 102/228 (44%), Gaps = 12/228 (5%)

Query: 251 GDTLDRPTPKSIAPLEEVGSVVQIA-AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDE 309
           G+    PTP    P+E  G   Q++ A P    AV+    +Y++G       G G   + 
Sbjct: 4   GEDSRPPTPSE--PMEADGMERQLSWALPELPPAVSS---LYTWGRSDLGQTGSGRDQNS 58

Query: 310 LQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG-HGDEIDKTLPEP 368
             P  +Q    +G  VV  + G  +   +   G +YT G      LG  G E+    P  
Sbjct: 59  TAPEPVQAL--QGKDVVHAAGGSYNSAFVTRDGELYTTGSNDARQLGVKGREV-ALEPIR 115

Query: 369 LSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLR 428
           +S+L+ +    V   +     +VD G +  +G   +G LG  + G S    +PR+L  +R
Sbjct: 116 VSALEMNNVHGVACGQGHMLAVVDNGHLAAWGSNEYGQLGTGEVGAS--AAQPRVLKRIR 173

Query: 429 AHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 476
             H ++++ G  H++ +T  G+++ FG+     LGH  +    +PT +
Sbjct: 174 GAHFARVAAGATHSLALTSSGQVYSFGEGSFGALGHGDVNNRAKPTLV 221



 Score = 42.7 bits (99), Expect = 0.47,   Method: Compositional matrix adjust.
 Identities = 39/142 (27%), Positives = 64/142 (45%), Gaps = 10/142 (7%)

Query: 114 MQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           + I  G Y +  +S S  VF+ G +  G LG+G       +F     P     VQV+  +
Sbjct: 230 VSIAAGEYFSAAVSLSGRVFTWGRNKYGQLGNGEFGN---AFLPQPVPGIEQAVQVACGD 286

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDT------NRPIFRPRLVEALKGVPCKQVTAGLN 226
           +H   + + G+V+T G +SS   G          N  +  P  V++L     +QV+AG  
Sbjct: 287 HHCIALTRWGEVYTWGLHSSGQLGQGSNLGSEALNGCLCSPSRVDSLADQSIRQVSAGAR 346

Query: 227 FTGFLTIRGHVHTCGSNTHGQL 248
            + F++    +   G+N  GQL
Sbjct: 347 HSFFVSPGEQLWGAGANDEGQL 368


>gi|444516740|gb|ELV11273.1| E3 ubiquitin-protein ligase HERC2 [Tupaia chinensis]
          Length = 3151

 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 95/326 (29%), Positives = 160/326 (49%), Gaps = 12/326 (3%)

Query: 161  SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQ 220
            SA +VVQV+        V   G+V+ CG+ ++   G   ++  +  PR V AL     K+
Sbjct: 1295 SALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGLSSGTVPLPRQVTALSSYVVKK 1354

Query: 221  VT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGP 278
            V   +G      LT+ G V + G    G+LGH   ++   P+ I  L+    +  IA G 
Sbjct: 1355 VAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALK-TKRIRDIACGS 1413

Query: 279  SYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEHVV 336
            S+  A+T +G +Y++G G    LGHG+   +L+P+ ++     G  VV+V+ G  D   +
Sbjct: 1414 SHSAALTSSGELYTWGLGEYGRLGHGDTTTQLKPKMVKVLL--GHRVVQVACGSRDAQTL 1471

Query: 337  ALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSV 396
            AL   G V++WG G  G LG G      +P+ +  L      Q+    + +  L  +G V
Sbjct: 1472 ALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVV 1531

Query: 397  YGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGD 456
            + +G   +  LG    G    V +P++++ LR   +  ++ G  H + VTD G+++ +GD
Sbjct: 1532 WTWGKGDYFRLG---HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGD 1588

Query: 457  NERAQLGHDTLRGCLEPTEIFIQEME 482
            N+  Q G+ T     +PT   +Q +E
Sbjct: 1589 NDHGQQGNGTTTVNRKPT--LVQGLE 1612



 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 87/262 (33%), Positives = 131/262 (50%), Gaps = 9/262 (3%)

Query: 207  PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHG-DTLDRPTPKSIAPL 265
            P   E L  +   QV  G      +T+ G V+ CG  T+G+LG G  +   P P+ +  L
Sbjct: 1288 PSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGLSSGTVPLPRQVTAL 1347

Query: 266  EE-VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH 324
               V   V + +G  +  A+T +G V+S+G G +  LGH  + +  +PR I+  + K I 
Sbjct: 1348 SSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIR 1407

Query: 325  VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVC--A 382
               ++ G  H  AL SSG +YTWG G  G LGHGD   +  P+ +  L  H  VQV   +
Sbjct: 1408 --DIACGSSHSAALTSSGELYTWGLGEYGRLGHGDTTTQLKPKMVKVLLGHRVVQVACGS 1465

Query: 383  RKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHT 442
            R  +T  L D G V+ +G   FG LG   RG S+    P+ ++ L    V QI  G   +
Sbjct: 1466 RDAQTLALTDEGLVFSWGDGDFGKLG---RGGSEGCNIPQNIERLNGQGVCQIECGAQFS 1522

Query: 443  VVVTDRGRLFGFGDNERAQLGH 464
            + +T  G ++ +G  +  +LGH
Sbjct: 1523 LALTKSGVVWTWGKGDYFRLGH 1544



 Score =  122 bits (307), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 87/280 (31%), Positives = 139/280 (49%), Gaps = 9/280 (3%)

Query: 166  VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 225
            V V++   H   +   G+V++ G+      GH  +  P  RPR++E+L+G+    V AG 
Sbjct: 2350 VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGH-GSRSPCDRPRVIESLRGIEVVDVAAGG 2408

Query: 226  NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA--AGPSYMLA 283
              +  +T  G ++T G   +G+LGH D+ D+  PK +  L+    VV IA  +G +  L 
Sbjct: 2409 AHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQG-HRVVGIACGSGDAQTLC 2467

Query: 284  VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 343
            +T +  V+S+G G    LG G       P  I +    G+ VVRV  G +  VAL  +G 
Sbjct: 2468 LTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL--TGLGVVRVECGSQFSVALTKAGA 2525

Query: 344  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 403
            VYTWGKG    LGHG +     P  +  L+   A+ +           + G VY +G   
Sbjct: 2526 VYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKAIAIATGSLHCVCCTEDGEVYTWGDND 2585

Query: 404  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV 443
             G LG    G ++ + RPR++ +L+   V++++ G  HT+
Sbjct: 2586 EGQLG---DGTTNAIQRPRLVAALQGKKVNRVACGSAHTL 2622



 Score =  117 bits (294), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 90/315 (28%), Positives = 144/315 (45%), Gaps = 7/315 (2%)

Query: 161  SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQ 220
            +A   VQ+   E     V   G+++  G  +    G   T   +  P L+E+++ V  K+
Sbjct: 2291 AALRPVQLIGGEQTLFAVTADGKLYATGYGAGGRLGIGGTES-VSTPTLLESIQHVFIKK 2349

Query: 221  VT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGP 278
            V   +G      L+  G V++ G    G+LGHG       P+ I  L  +  VV +AAG 
Sbjct: 2350 VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGSRSPCDRPRVIESLRGI-EVVDVAAGG 2408

Query: 279  SYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
            ++   VT  G +Y++G G    LGH +  D+L+P+ ++  +   +  +   +GD   + L
Sbjct: 2409 AHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVGIACGSGDAQTLCL 2468

Query: 339  DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYG 398
                 V++WG G  G LG G      +P  + SL     V+V    + +  L   G+VY 
Sbjct: 2469 TDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVRVECGSQFSVALTKAGAVYT 2528

Query: 399  FGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNE 458
            +G   +  LG    G  D V RPR +  L+      I+TG  H V  T+ G ++ +GDN+
Sbjct: 2529 WGKGDYHRLG---HGSDDHVRRPRQVQGLQGKKAIAIATGSLHCVCCTEDGEVYTWGDND 2585

Query: 459  RAQLGHDTLRGCLEP 473
              QLG  T      P
Sbjct: 2586 EGQLGDGTTNAIQRP 2600



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 79/242 (32%), Positives = 115/242 (47%), Gaps = 7/242 (2%)

Query: 119  GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
            GR+ T L  +  VFS G    G LGH      C     I       +  ++   +H+A +
Sbjct: 1361 GRHATALTVDGKVFSWGEGDDGKLGHF-SRMNCDKPRLIEALKTKRIRDIACGSSHSAAL 1419

Query: 179  LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN--FTGFLTIRGH 236
              SG+++T G       GH DT   + +P++V+ L G    QV  G     T  LT  G 
Sbjct: 1420 TSSGELYTWGLGEYGRLGHGDTTTQL-KPKMVKVLLGHRVVQVACGSRDAQTLALTDEGL 1478

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 296
            V + G    G+LG G +     P++I  L   G V QI  G  + LA+T +GVV+++G G
Sbjct: 1479 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTWGKG 1537

Query: 297  SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 356
              F LGHG      +P+ ++  R  G  +V V+ G  H +A+  SG VY WG    G  G
Sbjct: 1538 DYFRLGHGSDVHVRKPQVVEGLR--GKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQG 1595

Query: 357  HG 358
            +G
Sbjct: 1596 NG 1597



 Score = 99.8 bits (247), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 77/247 (31%), Positives = 124/247 (50%), Gaps = 12/247 (4%)

Query: 235  GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
            G ++  G N  GQLG   G  +  PTP +++A L  V    Q+  G   + AVT +G +Y
Sbjct: 2260 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALAALRPV----QLIGGEQTLFAVTADGKLY 2315

Query: 292  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 351
            + G G+   LG G       P  +++ +   I  V V++G +H +AL S G VY+WG+  
Sbjct: 2316 ATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAE 2375

Query: 352  CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 411
             G LGHG       P  + SL+    V V A    +  +   G +Y +G   +G LG  D
Sbjct: 2376 DGKLGHGSRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD 2435

Query: 412  RGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG 469
               S+  L+P+++++L+ H V  I+  +G   T+ +TD   ++ +GD +  +LG     G
Sbjct: 2436 ---SEDQLKPKLVEALQGHRVVGIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDG 2492

Query: 470  CLEPTEI 476
            C  P +I
Sbjct: 2493 CKVPMKI 2499



 Score = 98.6 bits (244), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 84/268 (31%), Positives = 125/268 (46%), Gaps = 18/268 (6%)

Query: 96   FLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFT 155
             L+S++H    ++  A N   + G++   L S   V+S G +  G LGHG   + C    
Sbjct: 2338 LLESIQHV--FIKKVAVN---SGGKHCLALSSEGEVYSWGEAEDGKLGHG-SRSPCDRPR 2391

Query: 156  RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALK- 214
             I       VV V+A   H+A V  +G ++T G       GH D+   + +P+LVEAL+ 
Sbjct: 2392 VIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQL-KPKLVEALQG 2450

Query: 215  ----GVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS 270
                G+ C    +G   T  LT    V + G   +G+LG G +     P  I  L  +G 
Sbjct: 2451 HRVVGIACG---SGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLG- 2506

Query: 271  VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 330
            VV++  G  + +A+T  G VY++G G    LGHG      +PR +Q    +G   + ++ 
Sbjct: 2507 VVRVECGSQFSVALTKAGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGL--QGKKAIAIAT 2564

Query: 331  GDEHVVALDSSGYVYTWGKGYCGALGHG 358
            G  H V     G VYTWG    G LG G
Sbjct: 2565 GSLHCVCCTEDGEVYTWGDNDEGQLGDG 2592



 Score = 56.2 bits (134), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 53/196 (27%), Positives = 84/196 (42%), Gaps = 7/196 (3%)

Query: 280  YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 339
            + L+  G+G +Y +G      LG  E      P   +      +  V++  G++ + A+ 
Sbjct: 2252 WTLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEAL--AALRPVQLIGGEQTLFAVT 2309

Query: 340  SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARK--RKTFVLVDTGSVY 397
            + G +Y  G G  G LG G     + P  L S++     +V      +    L   G VY
Sbjct: 2310 ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVY 2369

Query: 398  GFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDN 457
             +G    G LG   R   D   RPR+++SLR   V  ++ G  H+  VT  G L+ +G  
Sbjct: 2370 SWGEAEDGKLGHGSRSPCD---RPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKG 2426

Query: 458  ERAQLGHDTLRGCLEP 473
               +LGH      L+P
Sbjct: 2427 RYGRLGHSDSEDQLKP 2442



 Score = 52.8 bits (125), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 49/167 (29%), Positives = 76/167 (45%), Gaps = 4/167 (2%)

Query: 118  TGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
            +G   TL L  + +V+S G    G LG G  +  C    +I+  +   VV+V      + 
Sbjct: 2460 SGDAQTLCLTDDDTVWSWGDGDYGKLGRG-GSDGCKVPMKIDSLTGLGVVRVECGSQFSV 2518

Query: 177  FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
             + ++G V+T G       GH   +  + RPR V+ L+G     +  G       T  G 
Sbjct: 2519 ALTKAGAVYTWGKGDYHRLGHGSDDH-VRRPRQVQGLQGKKAIAIATGSLHCVCCTEDGE 2577

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
            V+T G N  GQLG G T     P+ +A L+    V ++A G ++ LA
Sbjct: 2578 VYTWGDNDEGQLGDGTTNAIQRPRLVAALQG-KKVNRVACGSAHTLA 2623



 Score = 52.8 bits (125), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 36/147 (24%), Positives = 72/147 (48%), Gaps = 5/147 (3%)

Query: 332  DEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 391
            D+  ++   SG +Y WG  + G LG  +     +P P  +L +   VQ+   ++  F + 
Sbjct: 2250 DDWTLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALAALRPVQLIGGEQTLFAVT 2309

Query: 392  DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRG 449
              G +Y     G+G+ G    G ++ V  P +L+S++   + +++  +G  H + ++  G
Sbjct: 2310 ADGKLYA---TGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 2366

Query: 450  RLFGFGDNERAQLGHDTLRGCLEPTEI 476
             ++ +G+ E  +LGH +   C  P  I
Sbjct: 2367 EVYSWGEAEDGKLGHGSRSPCDRPRVI 2393



 Score = 41.2 bits (95), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 34/113 (30%), Positives = 55/113 (48%), Gaps = 9/113 (7%)

Query: 367  EPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSD-KVLRPRILD 425
            E LS+L     VQV    +  F +   G VY  G    G LG    G+S   V  PR + 
Sbjct: 1292 ETLSALN---VVQVAGGSKSLFAVTVEGKVYACGEATNGRLGL---GLSSGTVPLPRQVT 1345

Query: 426  SLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 476
            +L ++ V +++  +G  H   +T  G++F +G+ +  +LGH +   C +P  I
Sbjct: 1346 ALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLI 1398


>gi|395501382|ref|XP_003755074.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
           [Sarcophilus harrisii]
          Length = 1057

 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 109/333 (32%), Positives = 156/333 (46%), Gaps = 13/333 (3%)

Query: 135 GSSLCGVLGHGPETTQCVSFTRI-NFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSF 193
           G++  G LG G    + V   R  +F     V  V     H  FVL  G V+TCG N   
Sbjct: 5   GNASFGQLGLGGIDEEIVLEPRKSDFFINKKVQDVGCGLRHTVFVLDDGTVYTCGCNDLG 64

Query: 194 CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDT 253
             GH  + +   +P  V AL       V+ G   T  L  +G V+  G +T GQLG   T
Sbjct: 65  QLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDTDGQLGLPGT 121

Query: 254 LDR-PTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHG-EQHDELQ 311
            +    P++I  L ++  +VQIA G  + LA++    V+S+G   +  LG G E   +  
Sbjct: 122 EEYIRVPRNIKSLTDI-QIVQIACGYYHSLALSKGSEVFSWGQNKHGQLGLGFELKRQSS 180

Query: 312 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSS 371
           P+ I++    GI   +V+AG  H   L  SG ++ WG+   G LG  DE D+ +P  L S
Sbjct: 181 PQLIKSLL--GIPFTQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRFVPNLLKS 238

Query: 372 LKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHH 431
           L+S   V +C  +  T  L   G V+ FG  G+G LG      +   + PR +  L    
Sbjct: 239 LRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG---HNSTSHEINPRKVFELMGSI 295

Query: 432 VSQISTGLYHT-VVVTDRGRLFGFGDNERAQLG 463
           V+QI+ G  HT   V   GR++ FG     QLG
Sbjct: 296 VTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  125 bits (314), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 86/276 (31%), Positives = 143/276 (51%), Gaps = 10/276 (3%)

Query: 204 IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 263
           +  PR  +       + V  GL  T F+   G V+TCG N  GQLGH  +  R  P+ + 
Sbjct: 22  VLEPRKSDFFINKKVQDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKS--RKKPEQVV 79

Query: 264 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQ-PRAIQTFRRKG 322
            L+   ++V ++ G ++ LA+   G VY++G  ++  LG     + ++ PR I++     
Sbjct: 80  ALD-AQNIVAVSCGEAHTLALNDKGQVYAWGLDTDGQLGLPGTEEYIRVPRNIKSL--TD 136

Query: 323 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK-TLPEPLSSLKSHLAVQVC 381
           I +V+++ G  H +AL     V++WG+   G LG G E+ + + P+ + SL      QV 
Sbjct: 137 IQIVQIACGYYHSLALSKGSEVFSWGQNKHGQLGLGFELKRQSSPQLIKSLLGIPFTQVA 196

Query: 382 ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYH 441
           A    +FVL  +G+++G+G   FG LG  D   +D+ + P +L SLR+  +  I  G  H
Sbjct: 197 AGGAHSFVLTLSGAIFGWGRNKFGQLGLNDE--NDRFV-PNLLKSLRSQKIVYICCGEDH 253

Query: 442 TVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF 477
           T  +T  G +F FG     QLGH++    + P ++F
Sbjct: 254 TAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVF 289



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 81/291 (27%), Positives = 138/291 (47%), Gaps = 8/291 (2%)

Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 179
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V VS  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVSCGEAHTLALN 100

Query: 180 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 239
             GQV+  G ++    G   T   I  PR +++L  +   Q+  G   +  L+    V +
Sbjct: 101 DKGQVYAWGLDTDGQLGLPGTEEYIRVPRNIKSLTDIQIVQIACGYYHSLALSKGSEVFS 160

Query: 240 CGSNTHGQLGHGDTLDR-PTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
            G N HGQLG G  L R  +P+ I  L  +    Q+AAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKHGQLGLGFELKRQSSPQLIKSLLGI-PFTQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 299 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 358
             LG  +++D   P  +++ R + I  V +  G++H  AL   G V+T+G G  G LGH 
Sbjct: 220 GQLGLNDENDRFVPNLLKSLRSQKI--VYICCGEDHTAALTKEGGVFTFGAGGYGQLGHN 277

Query: 359 DEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLG 408
               +  P  +  L   +  Q+ C R+  +  +  +G +Y FG  G G LG
Sbjct: 278 STSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 81/273 (29%), Positives = 131/273 (47%), Gaps = 8/273 (2%)

Query: 98  QSVEHSSDIVETSAGNM-QITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFT 155
           +S +    +V   A N+  ++ G  HTL +++   V++ G    G LG  P T + +   
Sbjct: 70  KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDTDGQLGL-PGTEEYIRVP 128

Query: 156 R-INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALK 214
           R I   +   +VQ++    H+  + +  +VF+ G N     G     +    P+L+++L 
Sbjct: 129 RNIKSLTDIQIVQIACGYYHSLALSKGSEVFSWGQNKHGQLGLGFELKRQSSPQLIKSLL 188

Query: 215 GVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQI 274
           G+P  QV AG   +  LT+ G +   G N  GQLG  D  DR  P  +  L     +V I
Sbjct: 189 GIPFTQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRFVPNLLKSLRS-QKIVYI 247

Query: 275 AAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEH 334
             G  +  A+T  G V++FG+G    LGH     E+ PR +  F   G  V +++ G +H
Sbjct: 248 CCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQH 305

Query: 335 VVA-LDSSGYVYTWGKGYCGALGHGDEIDKTLP 366
             A + SSG +Y++G G  G LG G   ++  P
Sbjct: 306 TSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338



 Score = 82.8 bits (203), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 71/206 (34%), Positives = 98/206 (47%), Gaps = 6/206 (2%)

Query: 114 MQITTGRYHTLLISN-SSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +QI  G YH+L +S  S VFS G +  G LG G E  +  S   I         QV+A  
Sbjct: 140 VQIACGYYHSLALSKGSEVFSWGQNKHGQLGLGFELKRQSSPQLIKSLLGIPFTQVAAGG 199

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            H+  +  SG +F  G N     G  D N   F P L+++L+      +  G + T  LT
Sbjct: 200 AHSFVLTLSGAIFGWGRNKFGQLGLNDENDR-FVPNLLKSLRSQKIVYICCGEDHTAALT 258

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVV 290
             G V T G+  +GQLGH  T     P+ +   E +GS+V QIA G  +  A V  +G +
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRI 316

Query: 291 YSFGSGSNFCLGHGEQHDELQPRAIQ 316
           YSFG G N  LG G   +   P  ++
Sbjct: 317 YSFGLGGNGQLGTGSTSNRKSPFTVK 342



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 54/217 (24%), Positives = 98/217 (45%), Gaps = 7/217 (3%)

Query: 50  PQKFRSLVDLAASQLCALHSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVET 109
           P+  +SL D+   Q+   +     +S+  ++    + N + +  L F    + S  ++++
Sbjct: 128 PRNIKSLTDIQIVQIACGYYHSLALSKGSEVFSWGQ-NKHGQLGLGFELKRQSSPQLIKS 186

Query: 110 SAG--NMQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVV 166
             G    Q+  G  H+ +++ S ++F  G +  G LG   E  + V    +    +  +V
Sbjct: 187 LLGIPFTQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRFVP-NLLKSLRSQKIV 245

Query: 167 QVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN 226
            +   E+H A + + G VFT G       GH  T+  I  PR V  L G    Q+  G  
Sbjct: 246 YICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI-NPRKVFELMGSIVTQIACGRQ 304

Query: 227 FT-GFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSI 262
            T  F+   G +++ G   +GQLG G T +R +P ++
Sbjct: 305 HTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341


>gi|356554129|ref|XP_003545401.1| PREDICTED: uncharacterized protein LOC100802464 [Glycine max]
          Length = 1106

 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 103/327 (31%), Positives = 155/327 (47%), Gaps = 29/327 (8%)

Query: 159 FPSAAHVVQVSASEN------HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEA 212
           FP A     V   +N      HAA V + G+VF+ G+ S    GH   +  +  P+L+EA
Sbjct: 299 FPKALESAVVLDVQNIACGGRHAALVTKQGEVFSWGEESGGRLGH-GVDSDVLHPKLIEA 357

Query: 213 LKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSI-APLEEVG 269
           L     + V  G   +  +T+ G ++T G+ T+  G LGHG+ +    PK +  PLE + 
Sbjct: 358 LSNTNIELVACGEYHSCAVTLSGDLYTWGNGTYNYGLLGHGNQVSHWVPKRVNGPLEGI- 416

Query: 270 SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS 329
            V  I+ GP +   VT  G +++FG G+   LGHG++     PR +++   KG+  VR +
Sbjct: 417 HVSYISCGPWHTAVVTSAGQLFTFGDGTFGALGHGDRKSVSLPREVESL--KGLRTVRAA 474

Query: 330 AGDEHVVAL------------DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLA 377
            G  H  A+             SS  ++TWG G  G LGH D+  K +P  ++ L  H  
Sbjct: 475 CGVWHTAAVVEVMVGNSSSSNCSSVDLFTWGDGDKGRLGHVDKEAKLVPTCVA-LAEHNV 533

Query: 378 VQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIST 437
            QV      T  L  +G VY  G   +G LG P    +D  L   +   L    V +I+ 
Sbjct: 534 CQVACGHSLTVALTTSGRVYTMGSPVYGQLGNPQ---ADGKLPILVEGKLSESFVEEIAC 590

Query: 438 GLYHTVVVTDRGRLFGFGDNERAQLGH 464
           G YH  V+T R  ++ +G     +LGH
Sbjct: 591 GAYHVAVLTSRTEVYTWGKGANGRLGH 617



 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 93/291 (31%), Positives = 135/291 (46%), Gaps = 23/291 (7%)

Query: 100 VEHSSDIVETSAGNMQ-ITTGRYHTLLISNSS---VFSCGSSLCGVLGHGPETTQCVSFT 155
           V H   I   S  N++ +  G YH+  ++ S     +  G+   G+LGHG + +  V   
Sbjct: 349 VLHPKLIEALSNTNIELVACGEYHSCAVTLSGDLYTWGNGTYNYGLLGHGNQVSHWVP-K 407

Query: 156 RINFP-SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALK 214
           R+N P    HV  +S    H A V  +GQ+FT GD +    GH D  + +  PR VE+LK
Sbjct: 408 RVNGPLEGIHVSYISCGPWHTAVVTSAGQLFTFGDGTFGALGHGD-RKSVSLPREVESLK 466

Query: 215 GVPCKQVTAGLNFTGFLT------------IRGHVHTCGSNTHGQLGHGDTLDRPTPKSI 262
           G+   +   G+  T  +                 + T G    G+LGH D   +  P  +
Sbjct: 467 GLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSVDLFTWGDGDKGRLGHVDKEAKLVPTCV 526

Query: 263 APLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKG 322
           A  E   +V Q+A G S  +A+T +G VY+ GS     LG+  Q D   P  ++    + 
Sbjct: 527 ALAEH--NVCQVACGHSLTVALTTSGRVYTMGSPVYGQLGN-PQADGKLPILVEGKLSES 583

Query: 323 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
             V  ++ G  HV  L S   VYTWGKG  G LGHGD  D+  P  + +LK
Sbjct: 584 F-VEEIACGAYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNTPTLVEALK 633



 Score = 99.4 bits (246), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 86/295 (29%), Positives = 141/295 (47%), Gaps = 26/295 (8%)

Query: 207 PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 266
           P+ +E+   +  + +  G      +T +G V + G  + G+LGHG   D   PK I  L 
Sbjct: 300 PKALESAVVLDVQNIACGGRHAALVTKQGEVFSWGEESGGRLGHGVDSDVLHPKLIEALS 359

Query: 267 EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS-NF-CLGHGEQHDELQPRAIQTFRRKGIH 324
              ++  +A G  +  AVT +G +Y++G+G+ N+  LGHG Q     P+ +     +GIH
Sbjct: 360 NT-NIELVACGEYHSCAVTLSGDLYTWGNGTYNYGLLGHGNQVSHWVPKRVNG-PLEGIH 417

Query: 325 VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARK 384
           V  +S G  H   + S+G ++T+G G  GALGHGD    +LP  + SLK    V+     
Sbjct: 418 VSYISCGPWHTAVVTSAGQLFTFGDGTFGALGHGDRKSVSLPREVESLKGLRTVRAACGV 477

Query: 385 RKTFVLVDTG------------SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHV 432
             T  +V+               ++ +G    G LG  D+   +  L P  + +L  H+V
Sbjct: 478 WHTAAVVEVMVGNSSSSNCSSVDLFTWGDGDKGRLGHVDK---EAKLVPTCV-ALAEHNV 533

Query: 433 SQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCL------EPTEIFIQEM 481
            Q++ G   TV +T  GR++  G     QLG+    G L      + +E F++E+
Sbjct: 534 CQVACGHSLTVALTTSGRVYTMGSPVYGQLGNPQADGKLPILVEGKLSESFVEEI 588



 Score = 66.2 bits (160), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 63/225 (28%), Positives = 99/225 (44%), Gaps = 19/225 (8%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSASEN 173
           I+ G +HT +++++  +F+ G    G LGHG   +  VS  R +        V+ +    
Sbjct: 421 ISCGPWHTAVVTSAGQLFTFGDGTFGALGHGDRKS--VSLPREVESLKGLRTVRAACGVW 478

Query: 174 HAAFVLQ------------SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQV 221
           H A V++            S  +FT GD      GH D    +  P  V   +   C QV
Sbjct: 479 HTAAVVEVMVGNSSSSNCSSVDLFTWGDGDKGRLGHVDKEAKLV-PTCVALAEHNVC-QV 536

Query: 222 TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 281
             G + T  LT  G V+T GS  +GQLG+    D   P  +        V +IA G  ++
Sbjct: 537 ACGHSLTVALTTSGRVYTMGSPVYGQLGNPQA-DGKLPILVEGKLSESFVEEIACGAYHV 595

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVV 326
             +T    VY++G G+N  LGHG+  D   P  ++  + K +  +
Sbjct: 596 AVLTSRTEVYTWGKGANGRLGHGDTDDRNTPTLVEALKDKDVKSI 640



 Score = 53.1 bits (126), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 55/198 (27%), Positives = 87/198 (43%), Gaps = 21/198 (10%)

Query: 92  RVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQ- 150
           R +R    V H++ +VE       +  G   +   S+  +F+ G    G LGH  +  + 
Sbjct: 469 RTVRAACGVWHTAAVVE-------VMVGNSSSSNCSSVDLFTWGDGDKGRLGHVDKEAKL 521

Query: 151 ---CVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRP 207
              CV+    N      V QV+   +    +  SG+V+T G       G+   +  +  P
Sbjct: 522 VPTCVALAEHN------VCQVACGHSLTVALTTSGRVYTMGSPVYGQLGNPQADGKL--P 573

Query: 208 RLVEA-LKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 266
            LVE  L     +++  G      LT R  V+T G   +G+LGHGDT DR TP  +  L+
Sbjct: 574 ILVEGKLSESFVEEIACGAYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNTPTLVEALK 633

Query: 267 EVGSVVQIAAGPSYMLAV 284
           +   V  IA G ++  A+
Sbjct: 634 D-KDVKSIACGTTFTAAI 650



 Score = 39.3 bits (90), Expect = 4.6,   Method: Compositional matrix adjust.
 Identities = 34/124 (27%), Positives = 57/124 (45%), Gaps = 3/124 (2%)

Query: 115 QITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
           Q+  G   T+ ++ S  V++ GS + G LG+ P+    +        S + V +++    
Sbjct: 535 QVACGHSLTVALTTSGRVYTMGSPVYGQLGN-PQADGKLPILVEGKLSESFVEEIACGAY 593

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
           H A +    +V+T G  ++   GH DT+     P LVEALK    K +  G  FT  + +
Sbjct: 594 HVAVLTSRTEVYTWGKGANGRLGHGDTD-DRNTPTLVEALKDKDVKSIACGTTFTAAICL 652

Query: 234 RGHV 237
              V
Sbjct: 653 HKWV 656


>gi|395501384|ref|XP_003755075.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
           [Sarcophilus harrisii]
          Length = 1049

 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 109/333 (32%), Positives = 156/333 (46%), Gaps = 13/333 (3%)

Query: 135 GSSLCGVLGHGPETTQCVSFTRI-NFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSF 193
           G++  G LG G    + V   R  +F     V  V     H  FVL  G V+TCG N   
Sbjct: 5   GNASFGQLGLGGIDEEIVLEPRKSDFFINKKVQDVGCGLRHTVFVLDDGTVYTCGCNDLG 64

Query: 194 CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDT 253
             GH  + +   +P  V AL       V+ G   T  L  +G V+  G +T GQLG   T
Sbjct: 65  QLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDTDGQLGLPGT 121

Query: 254 LDR-PTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHG-EQHDELQ 311
            +    P++I  L ++  +VQIA G  + LA++    V+S+G   +  LG G E   +  
Sbjct: 122 EEYIRVPRNIKSLTDI-QIVQIACGYYHSLALSKGSEVFSWGQNKHGQLGLGFELKRQSS 180

Query: 312 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSS 371
           P+ I++    GI   +V+AG  H   L  SG ++ WG+   G LG  DE D+ +P  L S
Sbjct: 181 PQLIKSLL--GIPFTQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRFVPNLLKS 238

Query: 372 LKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHH 431
           L+S   V +C  +  T  L   G V+ FG  G+G LG      +   + PR +  L    
Sbjct: 239 LRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG---HNSTSHEINPRKVFELMGSI 295

Query: 432 VSQISTGLYHT-VVVTDRGRLFGFGDNERAQLG 463
           V+QI+ G  HT   V   GR++ FG     QLG
Sbjct: 296 VTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  125 bits (314), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 86/276 (31%), Positives = 143/276 (51%), Gaps = 10/276 (3%)

Query: 204 IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 263
           +  PR  +       + V  GL  T F+   G V+TCG N  GQLGH  +  R  P+ + 
Sbjct: 22  VLEPRKSDFFINKKVQDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKS--RKKPEQVV 79

Query: 264 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQ-PRAIQTFRRKG 322
            L+   ++V ++ G ++ LA+   G VY++G  ++  LG     + ++ PR I++     
Sbjct: 80  ALD-AQNIVAVSCGEAHTLALNDKGQVYAWGLDTDGQLGLPGTEEYIRVPRNIKSL--TD 136

Query: 323 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK-TLPEPLSSLKSHLAVQVC 381
           I +V+++ G  H +AL     V++WG+   G LG G E+ + + P+ + SL      QV 
Sbjct: 137 IQIVQIACGYYHSLALSKGSEVFSWGQNKHGQLGLGFELKRQSSPQLIKSLLGIPFTQVA 196

Query: 382 ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYH 441
           A    +FVL  +G+++G+G   FG LG  D   +D+ + P +L SLR+  +  I  G  H
Sbjct: 197 AGGAHSFVLTLSGAIFGWGRNKFGQLGLNDE--NDRFV-PNLLKSLRSQKIVYICCGEDH 253

Query: 442 TVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF 477
           T  +T  G +F FG     QLGH++    + P ++F
Sbjct: 254 TAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVF 289



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 81/291 (27%), Positives = 138/291 (47%), Gaps = 8/291 (2%)

Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 179
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V VS  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVSCGEAHTLALN 100

Query: 180 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 239
             GQV+  G ++    G   T   I  PR +++L  +   Q+  G   +  L+    V +
Sbjct: 101 DKGQVYAWGLDTDGQLGLPGTEEYIRVPRNIKSLTDIQIVQIACGYYHSLALSKGSEVFS 160

Query: 240 CGSNTHGQLGHGDTLDR-PTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
            G N HGQLG G  L R  +P+ I  L  +    Q+AAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKHGQLGLGFELKRQSSPQLIKSLLGI-PFTQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 299 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 358
             LG  +++D   P  +++ R + I  V +  G++H  AL   G V+T+G G  G LGH 
Sbjct: 220 GQLGLNDENDRFVPNLLKSLRSQKI--VYICCGEDHTAALTKEGGVFTFGAGGYGQLGHN 277

Query: 359 DEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLG 408
               +  P  +  L   +  Q+ C R+  +  +  +G +Y FG  G G LG
Sbjct: 278 STSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score = 99.8 bits (247), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 81/273 (29%), Positives = 131/273 (47%), Gaps = 8/273 (2%)

Query: 98  QSVEHSSDIVETSAGNM-QITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFT 155
           +S +    +V   A N+  ++ G  HTL +++   V++ G    G LG  P T + +   
Sbjct: 70  KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDTDGQLGL-PGTEEYIRVP 128

Query: 156 R-INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALK 214
           R I   +   +VQ++    H+  + +  +VF+ G N     G     +    P+L+++L 
Sbjct: 129 RNIKSLTDIQIVQIACGYYHSLALSKGSEVFSWGQNKHGQLGLGFELKRQSSPQLIKSLL 188

Query: 215 GVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQI 274
           G+P  QV AG   +  LT+ G +   G N  GQLG  D  DR  P  +  L     +V I
Sbjct: 189 GIPFTQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRFVPNLLKSLRS-QKIVYI 247

Query: 275 AAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEH 334
             G  +  A+T  G V++FG+G    LGH     E+ PR +  F   G  V +++ G +H
Sbjct: 248 CCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQH 305

Query: 335 VVA-LDSSGYVYTWGKGYCGALGHGDEIDKTLP 366
             A + SSG +Y++G G  G LG G   ++  P
Sbjct: 306 TSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338



 Score = 82.8 bits (203), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 71/206 (34%), Positives = 98/206 (47%), Gaps = 6/206 (2%)

Query: 114 MQITTGRYHTLLISN-SSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +QI  G YH+L +S  S VFS G +  G LG G E  +  S   I         QV+A  
Sbjct: 140 VQIACGYYHSLALSKGSEVFSWGQNKHGQLGLGFELKRQSSPQLIKSLLGIPFTQVAAGG 199

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            H+  +  SG +F  G N     G  D N   F P L+++L+      +  G + T  LT
Sbjct: 200 AHSFVLTLSGAIFGWGRNKFGQLGLNDENDR-FVPNLLKSLRSQKIVYICCGEDHTAALT 258

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVV 290
             G V T G+  +GQLGH  T     P+ +   E +GS+V QIA G  +  A V  +G +
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRI 316

Query: 291 YSFGSGSNFCLGHGEQHDELQPRAIQ 316
           YSFG G N  LG G   +   P  ++
Sbjct: 317 YSFGLGGNGQLGTGSTSNRKSPFTVK 342



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 54/217 (24%), Positives = 98/217 (45%), Gaps = 7/217 (3%)

Query: 50  PQKFRSLVDLAASQLCALHSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVET 109
           P+  +SL D+   Q+   +     +S+  ++    + N + +  L F    + S  ++++
Sbjct: 128 PRNIKSLTDIQIVQIACGYYHSLALSKGSEVFSWGQ-NKHGQLGLGFELKRQSSPQLIKS 186

Query: 110 SAG--NMQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVV 166
             G    Q+  G  H+ +++ S ++F  G +  G LG   E  + V    +    +  +V
Sbjct: 187 LLGIPFTQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRFVP-NLLKSLRSQKIV 245

Query: 167 QVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN 226
            +   E+H A + + G VFT G       GH  T+  I  PR V  L G    Q+  G  
Sbjct: 246 YICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI-NPRKVFELMGSIVTQIACGRQ 304

Query: 227 FT-GFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSI 262
            T  F+   G +++ G   +GQLG G T +R +P ++
Sbjct: 305 HTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341


>gi|441617074|ref|XP_004088418.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
            HERC2-like [Nomascus leucogenys]
          Length = 4530

 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 96/328 (29%), Positives = 158/328 (48%), Gaps = 16/328 (4%)

Query: 161  SAAHVVQVSASENHAAFVLQSGQVFTCGD--NSSFCCGHRDTNRPIFRPRLVEALKGVPC 218
            SA +VVQV+        V   G+V+ CG+  N     G      PI  PR + AL     
Sbjct: 2686 SALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPI--PRQITALSSYVV 2743

Query: 219  KQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA 276
            K+V   +G      LT+ G V + G    G+LGH   ++   P+ I  L+    +  IA 
Sbjct: 2744 KKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALK-TKRIRDIAC 2802

Query: 277  GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEH 334
            G S+  A+T +G +Y++G G    LGHG+   +L+P+ ++     G  V++V+ G  D  
Sbjct: 2803 GSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLL--GHRVIQVACGSRDAQ 2860

Query: 335  VVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 394
             +AL   G V++WG G  G LG G      +P+ +  L      Q+    + +  L  +G
Sbjct: 2861 TLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSG 2920

Query: 395  SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 454
             V+ +G   +  LG    G    V +P++++ LR   +  ++ G  H + VTD G+++ +
Sbjct: 2921 VVWTWGKGDYFRLG---HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAW 2977

Query: 455  GDNERAQLGHDTLRGCLEPTEIFIQEME 482
            GDN+  Q G+ T     +PT   +Q +E
Sbjct: 2978 GDNDHGQQGNGTTTVNRKPT--LVQGLE 3003



 Score =  125 bits (315), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 93/286 (32%), Positives = 140/286 (48%), Gaps = 10/286 (3%)

Query: 183  QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 242
            +VF  G N     G    ++ I  P   E L  +   QV  G      +T+ G V+ CG 
Sbjct: 2656 KVFVWGLNDKDQLGGLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGE 2714

Query: 243  NTHGQLGHG-DTLDRPTPKSIAPLEE-VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 300
             T+G+LG G  +   P P+ I  L   V   V + +G  +  A+T +G V+S+G G +  
Sbjct: 2715 ATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGK 2774

Query: 301  LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 360
            LGH  + +  +PR I+  + K I    ++ G  H  AL SSG +YTWG G  G LGHGD 
Sbjct: 2775 LGHFSRMNCDKPRLIEALKTKRIR--DIACGSSHSAALTSSGELYTWGLGEYGRLGHGDN 2832

Query: 361  IDKTLPEPLSSLKSHLAVQVC--ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKV 418
              +  P+ +  L  H  +QV   +R  +T  L D G V+ +G   FG LG   RG S+  
Sbjct: 2833 TTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLG---RGGSEGC 2889

Query: 419  LRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 464
              P+ ++ L    V QI  G   ++ +T  G ++ +G  +  +LGH
Sbjct: 2890 NIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGH 2935



 Score =  122 bits (306), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 86/280 (30%), Positives = 139/280 (49%), Gaps = 9/280 (3%)

Query: 166  VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 225
            V V++   H   +   G+V++ G+      GH + + P  RPR++E+L+G+    V AG 
Sbjct: 3738 VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRS-PCDRPRVIESLRGIEVVDVAAGG 3796

Query: 226  NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA--AGPSYMLA 283
              +  +T  G ++T G   +G+LGH D+ D+  PK +  L+    VV IA  +G +  L 
Sbjct: 3797 AHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQG-HRVVDIACGSGDAQTLC 3855

Query: 284  VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 343
            +T +  V+S+G G    LG G       P  I +    G+ VV+V  G +  VAL  SG 
Sbjct: 3856 LTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL--TGLGVVKVECGSQFSVALTKSGA 3913

Query: 344  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 403
            VYTWGKG    LGHG +     P  +  L+    + +           + G VY +G   
Sbjct: 3914 VYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDND 3973

Query: 404  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV 443
             G LG    G ++ + RPR++ +L+   V++++ G  HT+
Sbjct: 3974 EGQLG---DGTTNAIQRPRLVAALQGKKVNRVACGSAHTL 4010



 Score =  121 bits (304), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 82/269 (30%), Positives = 131/269 (48%), Gaps = 6/269 (2%)

Query: 207  PRLVEALKGVPCKQV--TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP 264
            P L+E+++ V  K+V   +G      L+  G V++ G    G+LGHG+      P+ I  
Sbjct: 3724 PTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIES 3783

Query: 265  LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH 324
            L  +  VV +AAG ++   VT  G +Y++G G    LGH +  D+L+P+ ++  +   + 
Sbjct: 3784 LRGI-EVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVV 3842

Query: 325  VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARK 384
             +   +GD   + L     V++WG G  G LG G      +P  + SL     V+V    
Sbjct: 3843 DIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGS 3902

Query: 385  RKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV 444
            + +  L  +G+VY +G   +  LG    G  D V RPR +  L+   V  I+TG  H V 
Sbjct: 3903 QFSVALTKSGAVYTWGKGDYHRLG---HGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 3959

Query: 445  VTDRGRLFGFGDNERAQLGHDTLRGCLEP 473
             T+ G ++ +GDN+  QLG  T      P
Sbjct: 3960 CTEDGEVYTWGDNDEGQLGDGTTNAIQRP 3988



 Score =  102 bits (253), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 84/265 (31%), Positives = 126/265 (47%), Gaps = 12/265 (4%)

Query: 96   FLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFT 155
             L+S++H    ++  A N   + G++   L S   V+S G +  G LGHG   + C    
Sbjct: 3726 LLESIQHV--FIKKVAVN---SGGKHCLALSSEGEVYSWGEAEDGKLGHG-NRSPCDRPR 3779

Query: 156  RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 215
             I       VV V+A   H+A V  +G ++T G       GH D+   + +P+LVEAL+G
Sbjct: 3780 VIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQL-KPKLVEALQG 3838

Query: 216  VPCKQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
                 +   +G   T  LT    V + G   +G+LG G +     P  I  L  +G VV+
Sbjct: 3839 HRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLG-VVK 3897

Query: 274  IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
            +  G  + +A+T +G VY++G G    LGHG      +PR +Q    +G  V+ ++ G  
Sbjct: 3898 VECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGL--QGKKVIAIATGSL 3955

Query: 334  HVVALDSSGYVYTWGKGYCGALGHG 358
            H V     G VYTWG    G LG G
Sbjct: 3956 HCVCCTEDGEVYTWGDNDEGQLGDG 3980



 Score =  101 bits (252), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 77/247 (31%), Positives = 125/247 (50%), Gaps = 12/247 (4%)

Query: 235  GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
            G ++  G N  GQLG   G  +  PTP +++A L  V    Q+  G   + AVT +G +Y
Sbjct: 3648 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPV----QLIGGEQTLFAVTADGKLY 3703

Query: 292  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 351
            + G G+   LG G       P  +++ +   I  V V++G +H +AL S G VY+WG+  
Sbjct: 3704 ATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAE 3763

Query: 352  CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 411
             G LGHG+      P  + SL+    V V A    +  +   G +Y +G   +G LG  D
Sbjct: 3764 DGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD 3823

Query: 412  RGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG 469
               S+  L+P+++++L+ H V  I+  +G   T+ +TD   ++ +GD +  +LG     G
Sbjct: 3824 ---SEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDG 3880

Query: 470  CLEPTEI 476
            C  P +I
Sbjct: 3881 CKVPMKI 3887



 Score = 99.8 bits (247), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 79/242 (32%), Positives = 114/242 (47%), Gaps = 7/242 (2%)

Query: 119  GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
            GR+ T L  +  VFS G    G LGH      C     I       +  ++   +H+A +
Sbjct: 2752 GRHATALTVDGKVFSWGEGDDGKLGHF-SRMNCDKPRLIEALKTKRIRDIACGSSHSAAL 2810

Query: 179  LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN--FTGFLTIRGH 236
              SG+++T G       GH D N    +P++V+ L G    QV  G     T  LT  G 
Sbjct: 2811 TSSGELYTWGLGEYGRLGHGD-NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 2869

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 296
            V + G    G+LG G +     P++I  L   G V QI  G  + LA+T +GVV+++G G
Sbjct: 2870 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTWGKG 2928

Query: 297  SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 356
              F LGHG      +P+ ++  R  G  +V V+ G  H +A+  SG VY WG    G  G
Sbjct: 2929 DYFRLGHGSDVHVRKPQVVEGLR--GKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQG 2986

Query: 357  HG 358
            +G
Sbjct: 2987 NG 2988



 Score = 72.8 bits (177), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 55/181 (30%), Positives = 86/181 (47%), Gaps = 15/181 (8%)

Query: 204 IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 263
           +  P   E L  +   Q+         L+  G V+T   N+       DTL    P+ + 
Sbjct: 394 VIGPIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYNS-------DTL---APQLVQ 443

Query: 264 PLEEVGSVVQIAAGPS--YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTF--R 319
            L    ++V+IAA     + LA+   G VYS+G G    LGHG+     +P+ I  F  +
Sbjct: 444 GLAS-RNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGK 502

Query: 320 RKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQ 379
           + G HVV ++ G  +  A+ + G +YTWG+G  G LGHG   D+ +P  ++ LK    + 
Sbjct: 503 QAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVID 562

Query: 380 V 380
           V
Sbjct: 563 V 563



 Score = 70.1 bits (170), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 56/181 (30%), Positives = 91/181 (50%), Gaps = 20/181 (11%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V Q++ +E     + ++G+V+T   NS       DT      P+LV+ L      ++ A 
Sbjct: 408 VTQIACAEKRFLILSRNGRVYTQAYNS-------DT----LAPQLVQGLASRNIVKIAAH 456

Query: 225 LNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGS-VVQIAAGPS 279
            +   +L +   G V++ G    G+LGHGDT+    PK I+    ++ G  VV IA G +
Sbjct: 457 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGST 516

Query: 280 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS--AGDEHVVA 337
           Y  A+T  G +Y++G G+   LGHG   DE  P  +     KG+ V+ V+  +GD   +A
Sbjct: 517 YSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGL--KGLKVIDVACGSGDAQTLA 574

Query: 338 L 338
           +
Sbjct: 575 V 575



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 66/225 (29%), Positives = 100/225 (44%), Gaps = 8/225 (3%)

Query: 116  ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
            I  G  H+  L S+  +++ G    G LGHG  TTQ +    +       V+QV+     
Sbjct: 2800 IACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQ-LKPKMVKVLLGHRVIQVACGSRD 2858

Query: 175  AA--FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            A    +   G VF+ GD      G R  +     P+ +E L G    Q+  G  F+  LT
Sbjct: 2859 AQTLALTDEGLVFSWGDGDFGKLG-RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALT 2917

Query: 233  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
              G V T G   + +LGHG  +    P+ +  L     +V +A G  + LAVT +G VY+
Sbjct: 2918 KSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRG-KKIVHVAVGALHCLAVTDSGQVYA 2976

Query: 293  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
            +G   +   G+G      +P  +Q    +G  + RV+ G  H VA
Sbjct: 2977 WGDNDHGQQGNGTTTVNRKPTLVQGL--EGQKITRVACGSSHSVA 3019



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 50/167 (29%), Positives = 76/167 (45%), Gaps = 4/167 (2%)

Query: 118  TGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
            +G   TL L  + +V+S G    G LG G  +  C    +I+  +   VV+V      + 
Sbjct: 3848 SGDAQTLCLTDDDTVWSWGDGDYGKLGRG-GSDGCKVPMKIDSLTGLGVVKVECGSQFSV 3906

Query: 177  FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
             + +SG V+T G       GH   +  + RPR V+ L+G     +  G       T  G 
Sbjct: 3907 ALTKSGAVYTWGKGDYHRLGHGSDDH-VRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGE 3965

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
            V+T G N  GQLG G T     P+ +A L+    V ++A G ++ LA
Sbjct: 3966 VYTWGDNDEGQLGDGTTNAIQRPRLVAALQG-KKVNRVACGSAHTLA 4011



 Score = 52.4 bits (124), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 36/147 (24%), Positives = 71/147 (48%), Gaps = 5/147 (3%)

Query: 332  DEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 391
            D+  ++   SG +Y WG  + G LG  +     +P P  +L +   VQ+   ++  F + 
Sbjct: 3638 DDWTLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVT 3697

Query: 392  DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRG 449
              G +Y     G+G+ G    G ++ V  P +L+S++   + +++  +G  H + ++  G
Sbjct: 3698 ADGKLYA---TGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 3754

Query: 450  RLFGFGDNERAQLGHDTLRGCLEPTEI 476
             ++ +G+ E  +LGH     C  P  I
Sbjct: 3755 EVYSWGEAEDGKLGHGNRSPCDRPRVI 3781



 Score = 45.4 bits (106), Expect = 0.063,   Method: Compositional matrix adjust.
 Identities = 45/161 (27%), Positives = 74/161 (45%), Gaps = 14/161 (8%)

Query: 322  GIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG--HGDEID-KTLPEPLSSLKSHLAV 378
            G  + + +AG E    + +   V+ WG      LG   G +I   +  E LS+L     V
Sbjct: 2637 GSLIRKKAAGLESAATIRTK--VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALN---VV 2691

Query: 379  QVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSD-KVLRPRILDSLRAHHVSQIS- 436
            QV    +  F +   G VY  G    G LG    G+S   V  PR + +L ++ V +++ 
Sbjct: 2692 QVAGGSKSLFAVTVEGKVYACGEATNGRLGL---GISSGTVPIPRQITALSSYVVKKVAV 2748

Query: 437  -TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 476
             +G  H   +T  G++F +G+ +  +LGH +   C +P  I
Sbjct: 2749 HSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLI 2789


>gi|281354478|gb|EFB30062.1| hypothetical protein PANDA_019422 [Ailuropoda melanoleuca]
          Length = 4814

 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 96/328 (29%), Positives = 158/328 (48%), Gaps = 16/328 (4%)

Query: 161  SAAHVVQVSASENHAAFVLQSGQVFTCGD--NSSFCCGHRDTNRPIFRPRLVEALKGVPC 218
            SA +VVQV+        V   G+V+ CG+  N     G      PI  PR + AL     
Sbjct: 2968 SALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPI--PRQITALSSYVV 3025

Query: 219  KQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA 276
            K+V   +G      LT+ G V + G    G+LGH   ++   P+ I  L+    +  IA 
Sbjct: 3026 KKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALK-TKRIRDIAC 3084

Query: 277  GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEH 334
            G S+  A+T +G +Y++G G    LGHG+   +L+P+ ++     G  V++V+ G  D  
Sbjct: 3085 GSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLL--GHRVIQVACGSRDAQ 3142

Query: 335  VVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 394
             +AL   G V++WG G  G LG G      +P+ +  L      Q+    + +  L  +G
Sbjct: 3143 TLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSG 3202

Query: 395  SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 454
             V+ +G   +  LG    G    V +P++++ LR   +  ++ G  H + VTD G+++ +
Sbjct: 3203 VVWTWGKGDYFRLG---HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAW 3259

Query: 455  GDNERAQLGHDTLRGCLEPTEIFIQEME 482
            GDN+  Q G+ T     +PT   +Q +E
Sbjct: 3260 GDNDHGQQGNGTTTVNRKPT--LVQGLE 3285



 Score =  126 bits (316), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 93/286 (32%), Positives = 140/286 (48%), Gaps = 10/286 (3%)

Query: 183  QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 242
            +VF  G N     G    ++ I  P   E L  +   QV  G      +T+ G V+ CG 
Sbjct: 2938 KVFVWGLNDKDQLGGLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGE 2996

Query: 243  NTHGQLGHG-DTLDRPTPKSIAPLEE-VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 300
             T+G+LG G  +   P P+ I  L   V   V + +G  +  A+T +G V+S+G G +  
Sbjct: 2997 ATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGK 3056

Query: 301  LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 360
            LGH  + +  +PR I+  + K I    ++ G  H  AL SSG +YTWG G  G LGHGD 
Sbjct: 3057 LGHFSRMNCDKPRLIEALKTKRIR--DIACGSSHSAALTSSGELYTWGLGEYGRLGHGDN 3114

Query: 361  IDKTLPEPLSSLKSHLAVQVC--ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKV 418
              +  P+ +  L  H  +QV   +R  +T  L D G V+ +G   FG LG   RG S+  
Sbjct: 3115 TTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLG---RGGSEGC 3171

Query: 419  LRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 464
              P+ ++ L    V QI  G   ++ +T  G ++ +G  +  +LGH
Sbjct: 3172 NIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGH 3217



 Score =  122 bits (305), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 83/269 (30%), Positives = 131/269 (48%), Gaps = 6/269 (2%)

Query: 207  PRLVEALKGVPCKQV--TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP 264
            P L+E+++ V  K+V   +G      L+  G V++ G    G+LGHG+      P+ I  
Sbjct: 4008 PTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIES 4067

Query: 265  LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH 324
            L  +  VV +AAG ++   VT  G +Y++G G    LGH +  D+L+P+ ++  +   + 
Sbjct: 4068 LRGI-EVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVV 4126

Query: 325  VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARK 384
             V   +GD   + L     V++WG G  G LG G      +P  + SL     V+V    
Sbjct: 4127 DVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGS 4186

Query: 385  RKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV 444
            + +  L  +G+VY +G   +  LG    G  D V RPR +  L+   V  I+TG  H V 
Sbjct: 4187 QFSVALTKSGAVYTWGKGDYHRLG---HGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 4243

Query: 445  VTDRGRLFGFGDNERAQLGHDTLRGCLEP 473
             T+ G ++ +GDN+  QLG  T      P
Sbjct: 4244 CTEDGEVYTWGDNDEGQLGDGTTNAIQRP 4272



 Score =  121 bits (304), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 85/280 (30%), Positives = 139/280 (49%), Gaps = 9/280 (3%)

Query: 166  VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 225
            V V++   H   +   G+V++ G+      GH + + P  RPR++E+L+G+    V AG 
Sbjct: 4022 VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRS-PCDRPRVIESLRGIEVVDVAAGG 4080

Query: 226  NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA--AGPSYMLA 283
              +  +T  G ++T G   +G+LGH D+ D+  PK +  L+    VV +A  +G +  L 
Sbjct: 4081 AHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQG-HRVVDVACGSGDAQTLC 4139

Query: 284  VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 343
            +T +  V+S+G G    LG G       P  I +    G+ VV+V  G +  VAL  SG 
Sbjct: 4140 LTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL--TGLGVVKVECGSQFSVALTKSGA 4197

Query: 344  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 403
            VYTWGKG    LGHG +     P  +  L+    + +           + G VY +G   
Sbjct: 4198 VYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDND 4257

Query: 404  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV 443
             G LG    G ++ + RPR++ +L+   V++++ G  HT+
Sbjct: 4258 EGQLG---DGTTNAIQRPRLVAALQGKKVNRVACGSAHTL 4294



 Score =  118 bits (295), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 92/311 (29%), Positives = 151/311 (48%), Gaps = 24/311 (7%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V Q++ +E     + ++G+V+T   NS       DT      P+LV+ L      ++ A 
Sbjct: 431 VTQIACAEKRFLILSRNGRVYTQAYNS-------DT----LAPQLVQGLASRNIIKIAAH 479

Query: 225 LNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGS-VVQIAAGPS 279
            +   +L +   G V++ G    G+LGHGDT+    PK I+    ++ G  VV IA G +
Sbjct: 480 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGST 539

Query: 280 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS--AGDEHVVA 337
           Y  A+T  G +Y++G G+   LGHG   DE  P  +     KG+ V+ V+  +GD   +A
Sbjct: 540 YSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGL--KGLKVIDVACGSGDAQTLA 597

Query: 338 LDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVY 397
           +  +G V++WG G  G LG G       P+ +  L+    V+V    + +  L   G VY
Sbjct: 598 VTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVY 657

Query: 398 GFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDN 457
            +G      LG    G  + V  P++L+ L+   V  ++ G  H + +T+   +  +G N
Sbjct: 658 SWGKGDNQRLG---HGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSN 714

Query: 458 ERAQLGHDTLR 468
           ++ Q   DTLR
Sbjct: 715 DQCQ-HFDTLR 724



 Score =  102 bits (255), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 85/265 (32%), Positives = 126/265 (47%), Gaps = 12/265 (4%)

Query: 96   FLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFT 155
             L+S++H    ++  A N   + G++   L S   V+S G +  G LGHG   + C    
Sbjct: 4010 LLESIQHV--FIKKVAVN---SGGKHCLALSSEGEVYSWGEAEDGKLGHG-NRSPCDRPR 4063

Query: 156  RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 215
             I       VV V+A   H+A V  +G ++T G       GH D+   + +P+LVEAL+G
Sbjct: 4064 VIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQL-KPKLVEALQG 4122

Query: 216  VPCKQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
                 V   +G   T  LT    V + G   +G+LG G +     P  I  L  +G VV+
Sbjct: 4123 HRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLG-VVK 4181

Query: 274  IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
            +  G  + +A+T +G VY++G G    LGHG      +PR +Q    +G  V+ ++ G  
Sbjct: 4182 VECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGL--QGKKVIAIATGSL 4239

Query: 334  HVVALDSSGYVYTWGKGYCGALGHG 358
            H V     G VYTWG    G LG G
Sbjct: 4240 HCVCCTEDGEVYTWGDNDEGQLGDG 4264



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 76/247 (30%), Positives = 125/247 (50%), Gaps = 12/247 (4%)

Query: 235  GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
            G ++  G N  GQLG   G  +  PTP +++A L  V    Q+  G   + AVT +G +Y
Sbjct: 3932 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPV----QLIGGEQTLFAVTADGKLY 3987

Query: 292  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 351
            + G G+   LG G       P  +++ +   I  V V++G +H +AL S G VY+WG+  
Sbjct: 3988 ATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAE 4047

Query: 352  CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 411
             G LGHG+      P  + SL+    V V A    +  +   G +Y +G   +G LG  D
Sbjct: 4048 DGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD 4107

Query: 412  RGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG 469
               S+  L+P+++++L+ H V  ++  +G   T+ +TD   ++ +GD +  +LG     G
Sbjct: 4108 ---SEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDG 4164

Query: 470  CLEPTEI 476
            C  P +I
Sbjct: 4165 CKVPMKI 4171



 Score = 99.0 bits (245), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 78/242 (32%), Positives = 114/242 (47%), Gaps = 7/242 (2%)

Query: 119  GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
            GR+ T L  +  VFS G    G LGH      C     I       +  ++   +H+A +
Sbjct: 3034 GRHATALTVDGKVFSWGEGDDGKLGHF-SRMNCDKPRLIEALKTKRIRDIACGSSHSAAL 3092

Query: 179  LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN--FTGFLTIRGH 236
              SG+++T G       GH D N    +P++V+ L G    QV  G     T  LT  G 
Sbjct: 3093 TSSGELYTWGLGEYGRLGHGD-NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 3151

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 296
            V + G    G+LG G +     P++I  L   G V QI  G  + LA+T +GVV+++G G
Sbjct: 3152 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTWGKG 3210

Query: 297  SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 356
              F LGHG      +P+ ++  R  G  +V V+ G  H +A+  +G VY WG    G  G
Sbjct: 3211 DYFRLGHGSDVHVRKPQVVEGLR--GKKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQG 3268

Query: 357  HG 358
            +G
Sbjct: 3269 NG 3270



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 87/328 (26%), Positives = 149/328 (45%), Gaps = 26/328 (7%)

Query: 50  PQKFRSLVDLAASQLCALHSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVET 109
           P +   L +L  +Q+      +  +SRN ++    +   +     + +Q +  S +I++ 
Sbjct: 420 PIQCEGLANLGVTQIACAEKRFLILSRNGRV--YTQAYNSDTLAPQLVQGLA-SRNIIKI 476

Query: 110 SAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSA 162
           +A     + G ++  L +   V+S G    G LGHG       P+     S  +    + 
Sbjct: 477 AAH----SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQ----AG 528

Query: 163 AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 222
            HVV ++    ++A +   G+++T G  +    GH  +      P LV  LKG+    V 
Sbjct: 529 KHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVA 587

Query: 223 AGLNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 280
            G      L +   G V + G   +G+LG G +    TPK I  L+++  VV++  G  +
Sbjct: 588 CGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL-DVVKVRCGSQF 646

Query: 281 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 340
            +A+T +G VYS+G G N  LGHG +     P+ ++    +G  V+ V+AG  H +AL  
Sbjct: 647 SIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGL--QGKKVIDVAAGSTHCLALTE 704

Query: 341 SGYVYTWGKGYCGALGHGDEIDKTLPEP 368
              V++WG        H D +  T PEP
Sbjct: 705 DSEVHSWGSN--DQCQHFDTLRVTKPEP 730



 Score = 76.6 bits (187), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 58/219 (26%), Positives = 100/219 (45%), Gaps = 21/219 (9%)

Query: 271 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 330
           V QIA      L ++ NG VY+    S          D L P+ +Q    + I  +   +
Sbjct: 431 VTQIACAEKRFLILSRNGRVYTQAYNS----------DTLAPQLVQGLASRNIIKIAAHS 480

Query: 331 GDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLA----VQVCARKRK 386
              H +AL ++G VY+WG G  G LGHGD +    P+ +S+     A    V +      
Sbjct: 481 DGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTY 540

Query: 387 TFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVV 444
           +  +   G +Y +G   +G LG    G S+    P ++  L+   V  ++  +G   T+ 
Sbjct: 541 SAAITAEGELYTWGRGNYGRLG---HGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLA 597

Query: 445 VTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQEMEE 483
           VT+ G+++ +GD +  +LG     GC  P    I+++++
Sbjct: 598 VTENGQVWSWGDGDYGKLGRGGSDGCKTPK--LIEKLQD 634



 Score = 66.6 bits (161), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 66/225 (29%), Positives = 99/225 (44%), Gaps = 8/225 (3%)

Query: 116  ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
            I  G  H+  L S+  +++ G    G LGHG  TTQ +    +       V+QV+     
Sbjct: 3082 IACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQ-LKPKMVKVLLGHRVIQVACGSRD 3140

Query: 175  AA--FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            A    +   G VF+ GD      G R  +     P+ +E L G    Q+  G  F+  LT
Sbjct: 3141 AQTLALTDEGLVFSWGDGDFGKLG-RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALT 3199

Query: 233  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
              G V T G   + +LGHG  +    P+ +  L     +V +A G  + LAVT  G VY+
Sbjct: 3200 KSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRG-KKIVHVAVGALHCLAVTDAGQVYA 3258

Query: 293  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
            +G   +   G+G      +P  +Q    +G  + RV+ G  H VA
Sbjct: 3259 WGDNDHGQQGNGTTTVNRKPTLVQGL--EGQKITRVACGSSHSVA 3301



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 50/167 (29%), Positives = 76/167 (45%), Gaps = 4/167 (2%)

Query: 118  TGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
            +G   TL L  + +V+S G    G LG G  +  C    +I+  +   VV+V      + 
Sbjct: 4132 SGDAQTLCLTDDDTVWSWGDGDYGKLGRG-GSDGCKVPMKIDSLTGLGVVKVECGSQFSV 4190

Query: 177  FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
             + +SG V+T G       GH   +  + RPR V+ L+G     +  G       T  G 
Sbjct: 4191 ALTKSGAVYTWGKGDYHRLGHGSDDH-VRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGE 4249

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
            V+T G N  GQLG G T     P+ +A L+    V ++A G ++ LA
Sbjct: 4250 VYTWGDNDEGQLGDGTTNAIQRPRLVAALQG-KKVNRVACGSAHTLA 4295



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 52/169 (30%), Positives = 76/169 (44%), Gaps = 8/169 (4%)

Query: 118 TGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
           +G   TL ++ N  V+S G    G LG G  +  C +   I       VV+V      + 
Sbjct: 590 SGDAQTLAVTENGQVWSWGDGDYGKLGRG-GSDGCKTPKLIEKLQDLDVVKVRCGSQFSI 648

Query: 177 FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
            + + GQV++ G   +   GH  T   +  P+L+E L+G     V AG      LT    
Sbjct: 649 ALTKDGQVYSWGKGDNQRLGH-GTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSE 707

Query: 237 VHTCGSNTHGQLGHGDTL--DRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
           VH+ GSN   Q  H DTL   +P P ++  L +   +V IA GP+   A
Sbjct: 708 VHSWGSNDQCQ--HFDTLRVTKPEPAALPGL-DTKHIVGIACGPAQSFA 753



 Score = 52.4 bits (124), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 36/147 (24%), Positives = 71/147 (48%), Gaps = 5/147 (3%)

Query: 332  DEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 391
            D+  ++   SG +Y WG  + G LG  +     +P P  +L +   VQ+   ++  F + 
Sbjct: 3922 DDWTLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVT 3981

Query: 392  DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRG 449
              G +Y     G+G+ G    G ++ V  P +L+S++   + +++  +G  H + ++  G
Sbjct: 3982 ADGKLYA---TGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 4038

Query: 450  RLFGFGDNERAQLGHDTLRGCLEPTEI 476
             ++ +G+ E  +LGH     C  P  I
Sbjct: 4039 EVYSWGEAEDGKLGHGNRSPCDRPRVI 4065



 Score = 45.4 bits (106), Expect = 0.061,   Method: Compositional matrix adjust.
 Identities = 45/161 (27%), Positives = 74/161 (45%), Gaps = 14/161 (8%)

Query: 322  GIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG--HGDEID-KTLPEPLSSLKSHLAV 378
            G  + + +AG E    + +   V+ WG      LG   G +I   +  E LS+L     V
Sbjct: 2919 GSLIRKKAAGLESAATIRTK--VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALN---VV 2973

Query: 379  QVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSD-KVLRPRILDSLRAHHVSQIS- 436
            QV    +  F +   G VY  G    G LG    G+S   V  PR + +L ++ V +++ 
Sbjct: 2974 QVAGGSKSLFAVTVEGKVYACGEATNGRLGL---GISSGTVPIPRQITALSSYVVKKVAV 3030

Query: 437  -TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 476
             +G  H   +T  G++F +G+ +  +LGH +   C +P  I
Sbjct: 3031 HSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLI 3071


>gi|395855546|ref|XP_003800216.1| PREDICTED: E3 ubiquitin-protein ligase HERC2 [Otolemur garnettii]
          Length = 5093

 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/334 (29%), Positives = 161/334 (48%), Gaps = 14/334 (4%)

Query: 161  SAAHVVQVSASENHAAFVLQSGQVFTCGD--NSSFCCGHRDTNRPIFRPRLVEALKGVPC 218
            SA +VVQV+        V   G+V+ CG+  N     G      PI  PR V AL     
Sbjct: 3251 SALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGLSSGTVPI--PRQVTALSSYVV 3308

Query: 219  KQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA 276
            K+V   +G      LT+ G V + G    G+LGH   ++   P+ I  L+    +  IA 
Sbjct: 3309 KKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALK-TKRIRDIAC 3367

Query: 277  GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEH 334
            G S+  A+T +G +Y++G G    LGHG+   +L+P+ ++     G  V++V+ G  D  
Sbjct: 3368 GSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLL--GHRVIQVACGSRDAQ 3425

Query: 335  VVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 394
             +AL   G V++WG G  G LG G      +P+ +  L      Q+    + +  L  +G
Sbjct: 3426 TLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSG 3485

Query: 395  SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 454
             V+ +G   +  LG    G    V +P++++ LR   +  ++ G  H + VTD G+++ +
Sbjct: 3486 VVWTWGKGDYFRLG---HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAW 3542

Query: 455  GDNERAQLGHDTLRGCLEPTEIFIQEMEEDTGLA 488
            GDN+  Q G+ T     +PT +   E ++ T +A
Sbjct: 3543 GDNDHGQQGNGTTTVNRKPTLVHGLEGQKITRVA 3576



 Score =  124 bits (312), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 92/286 (32%), Positives = 140/286 (48%), Gaps = 10/286 (3%)

Query: 183  QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 242
            +VF  G N     G    ++ I  P   E L  +   QV  G      +T+ G V+ CG 
Sbjct: 3221 KVFVWGLNDKDQLGGLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGE 3279

Query: 243  NTHGQLGHG-DTLDRPTPKSIAPLEE-VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 300
             T+G+LG G  +   P P+ +  L   V   V + +G  +  A+T +G V+S+G G +  
Sbjct: 3280 ATNGRLGLGLSSGTVPIPRQVTALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGK 3339

Query: 301  LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 360
            LGH  + +  +PR I+  + K I    ++ G  H  AL SSG +YTWG G  G LGHGD 
Sbjct: 3340 LGHFSRMNCDKPRLIEALKTKRIR--DIACGSSHSAALTSSGELYTWGLGEYGRLGHGDN 3397

Query: 361  IDKTLPEPLSSLKSHLAVQVC--ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKV 418
              +  P+ +  L  H  +QV   +R  +T  L D G V+ +G   FG LG   RG S+  
Sbjct: 3398 TTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLG---RGGSEGC 3454

Query: 419  LRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 464
              P+ ++ L    V QI  G   ++ +T  G ++ +G  +  +LGH
Sbjct: 3455 NIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGH 3500



 Score =  122 bits (307), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 86/281 (30%), Positives = 139/281 (49%), Gaps = 9/281 (3%)

Query: 166  VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 225
            V V++   H   +   G+V++ G+      GH + + P  RPR++E+L+G+    V AG 
Sbjct: 4301 VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRS-PCDRPRVIESLRGIEVADVAAGG 4359

Query: 226  NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA--AGPSYMLA 283
              +  +T  G ++T G   +G+LGH D+ D+  PK +  L+    VV IA  +G +  L 
Sbjct: 4360 AHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQG-HRVVDIACGSGDAQTLC 4418

Query: 284  VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 343
            +T +  V+S+G G    LG G       P  I +    G+ VV+V  G +  VAL  SG 
Sbjct: 4419 LTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL--TGLGVVKVECGSQFSVALTKSGA 4476

Query: 344  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 403
            VYTWGKG    LGHG +     P  +  L+    + +           + G VY +G   
Sbjct: 4477 VYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDND 4536

Query: 404  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV 444
             G LG    G ++ + RPR++ +L+   V++++ G  HT+ 
Sbjct: 4537 EGQLG---DGTTNAIQRPRLVAALQGKKVNRVACGSAHTLA 4574



 Score =  119 bits (299), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 81/269 (30%), Positives = 130/269 (48%), Gaps = 6/269 (2%)

Query: 207  PRLVEALKGVPCKQV--TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP 264
            P L+E+++ V  K+V   +G      L+  G V++ G    G+LGHG+      P+ I  
Sbjct: 4287 PTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIES 4346

Query: 265  LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH 324
            L  +  V  +AAG ++   VT  G +Y++G G    LGH +  D+L+P+ ++  +   + 
Sbjct: 4347 LRGI-EVADVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVV 4405

Query: 325  VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARK 384
             +   +GD   + L     V++WG G  G LG G      +P  + SL     V+V    
Sbjct: 4406 DIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGS 4465

Query: 385  RKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV 444
            + +  L  +G+VY +G   +  LG    G  D V RPR +  L+   V  I+TG  H V 
Sbjct: 4466 QFSVALTKSGAVYTWGKGDYHRLG---HGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 4522

Query: 445  VTDRGRLFGFGDNERAQLGHDTLRGCLEP 473
             T+ G ++ +GDN+  QLG  T      P
Sbjct: 4523 CTEDGEVYTWGDNDEGQLGDGTTNAIQRP 4551



 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 95/320 (29%), Positives = 155/320 (48%), Gaps = 25/320 (7%)

Query: 165  VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
            V Q++ +E     + ++G+V+T   NS       DT      P+LV+ L      ++ A 
Sbjct: 714  VTQIACAEKRFLILSRNGRVYTQAYNS-------DT----LAPQLVQGLASRNIVKIAAH 762

Query: 225  LNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGS-VVQIAAGPS 279
             +   +L +   G V++ G    G+LGHGDT+    PK I+    ++ G  VV IA G +
Sbjct: 763  SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISTFSGKQAGKHVVHIACGST 822

Query: 280  YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS--AGDEHVVA 337
            Y  A+T  G +Y++G G+   LGHG   DE  P  +     KG+ V+ V+  +GD   +A
Sbjct: 823  YSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGL--KGLKVIDVACGSGDAQTLA 880

Query: 338  LDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVY 397
            +  +G V++WG G  G LG G       P+ +  L+    V+V    + +  L   G VY
Sbjct: 881  VTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVY 940

Query: 398  GFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDN 457
             +G      LG    G  + V  P++L+ L+   V  ++ G  H + +T+   +  +G N
Sbjct: 941  SWGKGDNQRLG---HGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSN 997

Query: 458  ERAQLGHDTLRGCL-EPTEI 476
            ++ Q   DTLR    EPT +
Sbjct: 998  DQCQ-HFDTLRVTKPEPTAL 1016



 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 83/265 (31%), Positives = 125/265 (47%), Gaps = 12/265 (4%)

Query: 96   FLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFT 155
             L+S++H    ++  A N   + G++   L S   V+S G +  G LGHG   + C    
Sbjct: 4289 LLESIQHV--FIKKVAVN---SGGKHCLALSSEGEVYSWGEAEDGKLGHG-NRSPCDRPR 4342

Query: 156  RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 215
             I       V  V+A   H+A V  +G ++T G       GH D+   + +P+LVEAL+G
Sbjct: 4343 VIESLRGIEVADVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQL-KPKLVEALQG 4401

Query: 216  VPCKQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
                 +   +G   T  LT    V + G   +G+LG G +     P  I  L  +G VV+
Sbjct: 4402 HRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLG-VVK 4460

Query: 274  IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
            +  G  + +A+T +G VY++G G    LGHG      +PR +Q    +G  V+ ++ G  
Sbjct: 4461 VECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGL--QGKKVIAIATGSL 4518

Query: 334  HVVALDSSGYVYTWGKGYCGALGHG 358
            H V     G VYTWG    G LG G
Sbjct: 4519 HCVCCTEDGEVYTWGDNDEGQLGDG 4543



 Score = 99.8 bits (247), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 79/242 (32%), Positives = 114/242 (47%), Gaps = 7/242 (2%)

Query: 119  GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
            GR+ T L  +  VFS G    G LGH      C     I       +  ++   +H+A +
Sbjct: 3317 GRHATALTVDGKVFSWGEGDDGKLGHF-SRMNCDKPRLIEALKTKRIRDIACGSSHSAAL 3375

Query: 179  LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN--FTGFLTIRGH 236
              SG+++T G       GH D N    +P++V+ L G    QV  G     T  LT  G 
Sbjct: 3376 TSSGELYTWGLGEYGRLGHGD-NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 3434

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 296
            V + G    G+LG G +     P++I  L   G V QI  G  + LA+T +GVV+++G G
Sbjct: 3435 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTWGKG 3493

Query: 297  SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 356
              F LGHG      +P+ ++  R  G  +V V+ G  H +A+  SG VY WG    G  G
Sbjct: 3494 DYFRLGHGSDVHVRKPQVVEGLR--GKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQG 3551

Query: 357  HG 358
            +G
Sbjct: 3552 NG 3553



 Score = 99.8 bits (247), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 76/247 (30%), Positives = 124/247 (50%), Gaps = 12/247 (4%)

Query: 235  GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
            G ++  G N  GQLG   G  +  PTP +++A L  V    Q+  G   + AVT +G +Y
Sbjct: 4211 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPV----QLIGGEQTLFAVTADGKLY 4266

Query: 292  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 351
            + G G+   LG G       P  +++ +   I  V V++G +H +AL S G VY+WG+  
Sbjct: 4267 ATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAE 4326

Query: 352  CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 411
             G LGHG+      P  + SL+      V A    +  +   G +Y +G   +G LG  D
Sbjct: 4327 DGKLGHGNRSPCDRPRVIESLRGIEVADVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD 4386

Query: 412  RGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG 469
               S+  L+P+++++L+ H V  I+  +G   T+ +TD   ++ +GD +  +LG     G
Sbjct: 4387 ---SEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDG 4443

Query: 470  CLEPTEI 476
            C  P +I
Sbjct: 4444 CKVPMKI 4450



 Score = 99.4 bits (246), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 81/271 (29%), Positives = 127/271 (46%), Gaps = 15/271 (5%)

Query: 103  SSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHG---PETTQCVSFTRINF 159
            S +IV+ +A     + G ++  L +   V+S G    G LGHG   P     V  T    
Sbjct: 753  SRNIVKIAAH----SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISTFSGK 808

Query: 160  PSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCK 219
             +  HVV ++    ++A +   G+++T G  +    GH  +      P LV  LKG+   
Sbjct: 809  QAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAI-PMLVAGLKGLKVI 867

Query: 220  QVTAGLNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAG 277
             V  G      L +   G V + G   +G+LG G +    TPK I  L+++  VV++  G
Sbjct: 868  DVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL-DVVKVRCG 926

Query: 278  PSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
              + +A+T +G VYS+G G N  LGHG +     P+ ++    +G  V+ V+AG  H +A
Sbjct: 927  SQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGL--QGKKVIDVAAGSTHCLA 984

Query: 338  LDSSGYVYTWGKGYCGALGHGDEIDKTLPEP 368
            L     V++WG        H D +  T PEP
Sbjct: 985  LTEDSEVHSWGSN--DQCQHFDTLRVTKPEP 1013



 Score = 64.7 bits (156), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 65/225 (28%), Positives = 99/225 (44%), Gaps = 8/225 (3%)

Query: 116  ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
            I  G  H+  L S+  +++ G    G LGHG  TTQ +    +       V+QV+     
Sbjct: 3365 IACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQ-LKPKMVKVLLGHRVIQVACGSRD 3423

Query: 175  AA--FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            A    +   G VF+ GD      G R  +     P+ +E L G    Q+  G  F+  LT
Sbjct: 3424 AQTLALTDEGLVFSWGDGDFGKLG-RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALT 3482

Query: 233  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
              G V T G   + +LGHG  +    P+ +  L     +V +A G  + LAVT +G VY+
Sbjct: 3483 KSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRG-KKIVHVAVGALHCLAVTDSGQVYA 3541

Query: 293  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
            +G   +   G+G      +P  +     +G  + RV+ G  H VA
Sbjct: 3542 WGDNDHGQQGNGTTTVNRKPTLVHGL--EGQKITRVACGSSHSVA 3584



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 50/167 (29%), Positives = 76/167 (45%), Gaps = 4/167 (2%)

Query: 118  TGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
            +G   TL L  + +V+S G    G LG G  +  C    +I+  +   VV+V      + 
Sbjct: 4411 SGDAQTLCLTDDDTVWSWGDGDYGKLGRG-GSDGCKVPMKIDSLTGLGVVKVECGSQFSV 4469

Query: 177  FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
             + +SG V+T G       GH   +  + RPR V+ L+G     +  G       T  G 
Sbjct: 4470 ALTKSGAVYTWGKGDYHRLGHGSDDH-VRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGE 4528

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
            V+T G N  GQLG G T     P+ +A L+    V ++A G ++ LA
Sbjct: 4529 VYTWGDNDEGQLGDGTTNAIQRPRLVAALQG-KKVNRVACGSAHTLA 4574



 Score = 52.4 bits (124), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 36/147 (24%), Positives = 71/147 (48%), Gaps = 5/147 (3%)

Query: 332  DEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 391
            D+  ++   SG +Y WG  + G LG  +     +P P  +L +   VQ+   ++  F + 
Sbjct: 4201 DDWTLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVT 4260

Query: 392  DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRG 449
              G +Y     G+G+ G    G ++ V  P +L+S++   + +++  +G  H + ++  G
Sbjct: 4261 ADGKLYA---TGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 4317

Query: 450  RLFGFGDNERAQLGHDTLRGCLEPTEI 476
             ++ +G+ E  +LGH     C  P  I
Sbjct: 4318 EVYSWGEAEDGKLGHGNRSPCDRPRVI 4344



 Score = 44.3 bits (103), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 41/139 (29%), Positives = 65/139 (46%), Gaps = 12/139 (8%)

Query: 344  VYTWGKGYCGALG--HGDEID-KTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 400
            V+ WG      LG   G +I   +  E LS+L     VQV    +  F +   G VY  G
Sbjct: 3222 VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALN---VVQVAGGSKSLFAVTVEGKVYACG 3278

Query: 401  WMGFGSLGFPDRGVSD-KVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDN 457
                G LG    G+S   V  PR + +L ++ V +++  +G  H   +T  G++F +G+ 
Sbjct: 3279 EATNGRLGL---GLSSGTVPIPRQVTALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEG 3335

Query: 458  ERAQLGHDTLRGCLEPTEI 476
            +  +LGH +   C +P  I
Sbjct: 3336 DDGKLGHFSRMNCDKPRLI 3354


>gi|325180681|emb|CCA15086.1| RCC1 and BTB domaincontaining protein putative [Albugo laibachii
           Nc14]
          Length = 554

 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 108/352 (30%), Positives = 162/352 (46%), Gaps = 18/352 (5%)

Query: 132 FSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNS 191
           +S G +  G L H     + +  T I+F     ++ V+      AF+ ++G VFTCG N 
Sbjct: 14  YSFGQNSYGELCHNDTVDRTLP-TPISFCHNVKILDVACGNEQTAFLFETGDVFTCGYND 72

Query: 192 SFCCGHRDTNRPIFRPRLVEAL--KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLG 249
           S  CG   T+R +   RLV AL  + +   +   G      ++  G ++T G N+ GQLG
Sbjct: 73  SGQCGIGSTSR-VQSLRLVPALVTEDIAHIRSANGCEHLTAISRSGALYTFGFNSRGQLG 131

Query: 250 HGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDE 309
           HG T    TP  I  L     VV++A    + + +T  G +Y+FG      LG  +  D 
Sbjct: 132 HGSTNPITTPTKIKDLASY-HVVEVACSYFHTIVMTMEGTLYAFGRNDLGQLGIDDGMDR 190

Query: 310 LQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEID-----KT 364
             P  +  F  +   V+ V+ G  H V   ++G V  +GK   G LG G  +D       
Sbjct: 191 HVPVPLTYFNSRP--VLAVACGQHHTVVSLTNGGVVAFGKNDHGQLGTGYTLDYHASPSL 248

Query: 365 LPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRIL 424
           L  PL SL   +   +      T  L + GSVY FG   +G LG    G    +  P ++
Sbjct: 249 LAAPLDSL---VVPSLACGYYHTIALAEHGSVYSFGRNDYGQLG---HGHRHHLSEPTLI 302

Query: 425 DSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 476
            +L   H  Q++ G YHT+V+++ G+++ FG N   QLG   L  C  P  I
Sbjct: 303 KALAKTHAVQVTCGCYHTLVLSEDGKVYPFGRNNHGQLGLGNLIDCTSPQII 354



 Score =  116 bits (290), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 110/367 (29%), Positives = 161/367 (43%), Gaps = 24/367 (6%)

Query: 87  NGNWKRVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGP 146
           N    R L    S  H+  I++ + GN Q         L     VF+CG +  G  G G 
Sbjct: 27  NDTVDRTLPTPISFCHNVKILDVACGNEQTA------FLFETGDVFTCGYNDSGQCGIG- 79

Query: 147 ETTQCVSFTRINFPS-----AAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTN 201
            +T  V   R+  P+      AH+   +  E H   + +SG ++T G NS    GH  TN
Sbjct: 80  -STSRVQSLRL-VPALVTEDIAHIRSANGCE-HLTAISRSGALYTFGFNSRGQLGHGSTN 136

Query: 202 RPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKS 261
            PI  P  ++ L      +V      T  +T+ G ++  G N  GQLG  D +DR  P  
Sbjct: 137 -PITTPTKIKDLASYHVVEVACSYFHTIVMTMEGTLYAFGRNDLGQLGIDDGMDRHVP-- 193

Query: 262 IAPLEEVGS--VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFR 319
             PL    S  V+ +A G  + +    NG V +FG   +  LG G   D     ++    
Sbjct: 194 -VPLTYFNSRPVLAVACGQHHTVVSLTNGGVVAFGKNDHGQLGTGYTLDYHASPSLLAAP 252

Query: 320 RKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQ 379
              + V  ++ G  H +AL   G VY++G+   G LGHG     + P  + +L    AVQ
Sbjct: 253 LDSLVVPSLACGYYHTIALAEHGSVYSFGRNDYGQLGHGHRHHLSEPTLIKALAKTHAVQ 312

Query: 380 VCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGL 439
           V      T VL + G VY FG    G LG    G       P+I+ SLR   V ++++G 
Sbjct: 313 VTCGCYHTLVLSEDGKVYPFGRNNHGQLGL---GNLIDCTSPQIIASLRDKFVVKVASGF 369

Query: 440 YHTVVVT 446
           YH++ +T
Sbjct: 370 YHSICLT 376


>gi|354477676|ref|XP_003501045.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
           [Cricetulus griseus]
          Length = 1049

 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 91/276 (32%), Positives = 142/276 (51%), Gaps = 10/276 (3%)

Query: 204 IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 263
           +  PR  +       + V  GL  T F+   G V+TCG N  GQLGH  +  R  P+ + 
Sbjct: 22  VLEPRKSDFFANKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKS--RKKPEQVV 79

Query: 264 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH-GEQHDELQPRAIQTFRRKG 322
            L+   ++V ++ G ++ LA+   G VYS+G  S+  LG  G +     PR I++     
Sbjct: 80  ALD-AQNIVAVSCGEAHTLALNDKGQVYSWGLDSDGQLGLLGSEEYIRVPRNIKSL--SD 136

Query: 323 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK-TLPEPLSSLKSHLAVQVC 381
           I +V+V+ G  H +AL  +  V+ WG+   G LG G +  K T P+ + SL     +QV 
Sbjct: 137 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQTSPQLIKSLLGIPFMQVA 196

Query: 382 ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYH 441
           A    +FVL  +G+++G+G   FG LG  D   +D+ + P +L SLR+  +  I  G  H
Sbjct: 197 AGGAHSFVLTLSGAIFGWGRNKFGQLGLNDE--NDRYV-PNLLKSLRSQKIVYICCGEDH 253

Query: 442 TVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF 477
           T  +T  G +F FG     QLGH++    + P ++F
Sbjct: 254 TAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVF 289



 Score =  125 bits (314), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 104/333 (31%), Positives = 156/333 (46%), Gaps = 13/333 (3%)

Query: 135 GSSLCGVLGHGPETTQCVSFTRI-NFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSF 193
           G++  G LG G    + V   R  +F +   V  V     H  FVL  G V+TCG N   
Sbjct: 5   GNASYGQLGLGGIDEEIVLEPRKSDFFANKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLG 64

Query: 194 CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGH-GD 252
             GH  + +   +P  V AL       V+ G   T  L  +G V++ G ++ GQLG  G 
Sbjct: 65  QLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYSWGLDSDGQLGLLGS 121

Query: 253 TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHG-EQHDELQ 311
                 P++I  L ++  +VQ+A G  + LA++    V+ +G      LG G +   +  
Sbjct: 122 EEYIRVPRNIKSLSDI-QIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQTS 180

Query: 312 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSS 371
           P+ I++    GI  ++V+AG  H   L  SG ++ WG+   G LG  DE D+ +P  L S
Sbjct: 181 PQLIKSLL--GIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKS 238

Query: 372 LKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHH 431
           L+S   V +C  +  T  L   G V+ FG  G+G LG      +   + PR +  L    
Sbjct: 239 LRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG---HNSTSHEINPRKVFELMGSI 295

Query: 432 VSQISTGLYHT-VVVTDRGRLFGFGDNERAQLG 463
           V+Q++ G  HT   V   GR++ FG     QLG
Sbjct: 296 VTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  111 bits (277), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 81/291 (27%), Positives = 139/291 (47%), Gaps = 8/291 (2%)

Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 179
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V VS  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVSCGEAHTLALN 100

Query: 180 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 239
             GQV++ G +S    G   +   I  PR +++L  +   QV  G   +  L+    V  
Sbjct: 101 DKGQVYSWGLDSDGQLGLLGSEEYIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFC 160

Query: 240 CGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
            G N +GQLG G D   + +P+ I  L  +   +Q+AAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKYGQLGLGIDCKKQTSPQLIKSLLGI-PFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 299 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 358
             LG  +++D   P  +++ R + I  V +  G++H  AL   G V+T+G G  G LGH 
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRSQKI--VYICCGEDHTAALTKEGGVFTFGAGGYGQLGHN 277

Query: 359 DEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLG 408
               +  P  +  L   +  QV C R+  +  +  +G +Y FG  G G LG
Sbjct: 278 STSHEINPRKVFELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score = 99.4 bits (246), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 82/272 (30%), Positives = 126/272 (46%), Gaps = 6/272 (2%)

Query: 98  QSVEHSSDIVETSAGNM-QITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFT 155
           +S +    +V   A N+  ++ G  HTL +++   V+S G    G LG            
Sbjct: 70  KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYSWGLDSDGQLGLLGSEEYIRVPR 129

Query: 156 RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 215
            I   S   +VQV+    H+  + ++ +VF  G N     G     +    P+L+++L G
Sbjct: 130 NIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQTSPQLIKSLLG 189

Query: 216 VPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA 275
           +P  QV AG   +  LT+ G +   G N  GQLG  D  DR  P  +  L     +V I 
Sbjct: 190 IPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRS-QKIVYIC 248

Query: 276 AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHV 335
            G  +  A+T  G V++FG+G    LGH     E+ PR +  F   G  V +V+ G +H 
Sbjct: 249 CGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQVACGRQHT 306

Query: 336 VA-LDSSGYVYTWGKGYCGALGHGDEIDKTLP 366
            A + SSG +Y++G G  G LG G   ++  P
Sbjct: 307 SAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338



 Score = 79.7 bits (195), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 70/229 (30%), Positives = 109/229 (47%), Gaps = 11/229 (4%)

Query: 91  KRVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETT 149
           +  +R  ++++  SDI       +Q+  G YH+L +S +S VF  G +  G LG G +  
Sbjct: 122 EEYIRVPRNIKSLSDI-----QIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCK 176

Query: 150 QCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRL 209
           +  S   I        +QV+A   H+  +  SG +F  G N     G  D N   + P L
Sbjct: 177 KQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDR-YVPNL 235

Query: 210 VEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG 269
           +++L+      +  G + T  LT  G V T G+  +GQLGH  T     P+ +   E +G
Sbjct: 236 LKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMG 293

Query: 270 SVV-QIAAGPSYMLA-VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQ 316
           S+V Q+A G  +  A V  +G +YSFG G N  LG G   +   P  ++
Sbjct: 294 SIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342


>gi|351702482|gb|EHB05401.1| Putative E3 ubiquitin-protein ligase HERC4 [Heterocephalus glaber]
          Length = 1057

 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 91/276 (32%), Positives = 143/276 (51%), Gaps = 10/276 (3%)

Query: 204 IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 263
           +  PR  +       + V  GL  T F+   G V+TCG N  GQLGH  +  R  P+ + 
Sbjct: 22  VLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKS--RKKPEQVV 79

Query: 264 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH-GEQHDELQPRAIQTFRRKG 322
            L+   ++V ++ G ++ LA+   G VY++G  S+  LG  G +     PR I++     
Sbjct: 80  ALD-AQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSL--SD 136

Query: 323 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK-TLPEPLSSLKSHLAVQVC 381
           I +V+VS G  H +AL  +  V++WG+   G LG G +  K T P+ + SL     +QV 
Sbjct: 137 IQIVQVSCGYYHSLALSKASEVFSWGQNKYGQLGLGIDCKKQTSPQLIKSLLGIPFMQVA 196

Query: 382 ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYH 441
           A    +FVL  +G+++G+G   FG LG  D   +D+ + P +L SLR+  +  I  G  H
Sbjct: 197 AGGAHSFVLTLSGAIFGWGRNKFGQLGLNDE--NDRYV-PNLLKSLRSQKIVYICCGEDH 253

Query: 442 TVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF 477
           T  +T  G +F FG     QLGH++    + P ++F
Sbjct: 254 TAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVF 289



 Score =  125 bits (313), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 105/333 (31%), Positives = 155/333 (46%), Gaps = 13/333 (3%)

Query: 135 GSSLCGVLGHGPETTQCVSFTRI-NFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSF 193
           G++  G LG G    + V   R  +F     V  V     H  FVL  G V+TCG N   
Sbjct: 5   GNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLG 64

Query: 194 CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGH-GD 252
             GH  + +   +P  V AL       V+ G   T  L  +G V+  G ++ GQLG  G 
Sbjct: 65  QLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGS 121

Query: 253 TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHG-EQHDELQ 311
                 P++I  L ++  +VQ++ G  + LA++    V+S+G      LG G +   +  
Sbjct: 122 EECIRVPRNIKSLSDI-QIVQVSCGYYHSLALSKASEVFSWGQNKYGQLGLGIDCKKQTS 180

Query: 312 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSS 371
           P+ I++    GI  ++V+AG  H   L  SG ++ WG+   G LG  DE D+ +P  L S
Sbjct: 181 PQLIKSLL--GIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKS 238

Query: 372 LKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHH 431
           L+S   V +C  +  T  L   G V+ FG  G+G LG      +   + PR +  L    
Sbjct: 239 LRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG---HNSTSHEINPRKVFELMGSI 295

Query: 432 VSQISTGLYHT-VVVTDRGRLFGFGDNERAQLG 463
           V+QI+ G  HT   V   GR++ FG     QLG
Sbjct: 296 VTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  112 bits (279), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 80/291 (27%), Positives = 140/291 (48%), Gaps = 8/291 (2%)

Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 179
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V VS  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVSCGEAHTLALN 100

Query: 180 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 239
             GQV+  G +S    G   +   I  PR +++L  +   QV+ G   +  L+    V +
Sbjct: 101 DKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVSCGYYHSLALSKASEVFS 160

Query: 240 CGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
            G N +GQLG G D   + +P+ I  L  +   +Q+AAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKYGQLGLGIDCKKQTSPQLIKSLLGI-PFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 299 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 358
             LG  +++D   P  +++ R + I  V +  G++H  AL   G V+T+G G  G LGH 
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRSQKI--VYICCGEDHTAALTKEGGVFTFGAGGYGQLGHN 277

Query: 359 DEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLG 408
               +  P  +  L   +  Q+ C R+  +  +  +G +Y FG  G G LG
Sbjct: 278 STSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 85/274 (31%), Positives = 133/274 (48%), Gaps = 10/274 (3%)

Query: 98  QSVEHSSDIVETSAGNM-QITTGRYHTLLISNS-SVFSCGSSLCGVLGH-GPETTQCVSF 154
           +S +    +V   A N+  ++ G  HTL +++   V++ G    G LG  G E  +C+  
Sbjct: 70  KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSE--ECIRV 127

Query: 155 TR-INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEAL 213
            R I   S   +VQVS    H+  + ++ +VF+ G N     G     +    P+L+++L
Sbjct: 128 PRNIKSLSDIQIVQVSCGYYHSLALSKASEVFSWGQNKYGQLGLGIDCKKQTSPQLIKSL 187

Query: 214 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
            G+P  QV AG   +  LT+ G +   G N  GQLG  D  DR  P  +  L     +V 
Sbjct: 188 LGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRS-QKIVY 246

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           I  G  +  A+T  G V++FG+G    LGH     E+ PR +  F   G  V +++ G +
Sbjct: 247 ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQ 304

Query: 334 HVVA-LDSSGYVYTWGKGYCGALGHGDEIDKTLP 366
           H  A + SSG +Y++G G  G LG G   ++  P
Sbjct: 305 HTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338



 Score = 83.2 bits (204), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 78/251 (31%), Positives = 121/251 (48%), Gaps = 17/251 (6%)

Query: 70  IYA-GMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLISN 128
           +YA G+  + Q+ LL       +  +R  ++++  SDI       +Q++ G YH+L +S 
Sbjct: 105 VYAWGLDSDGQLGLLGS-----EECIRVPRNIKSLSDI-----QIVQVSCGYYHSLALSK 154

Query: 129 SS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTC 187
           +S VFS G +  G LG G +  +  S   I        +QV+A   H+  +  SG +F  
Sbjct: 155 ASEVFSWGQNKYGQLGLGIDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGW 214

Query: 188 GDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQ 247
           G N     G  D N   + P L+++L+      +  G + T  LT  G V T G+  +GQ
Sbjct: 215 GRNKFGQLGLNDENDR-YVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQ 273

Query: 248 LGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVVYSFGSGSNFCLGHGE 305
           LGH  T     P+ +   E +GS+V QIA G  +  A V  +G +YSFG G N  LG G 
Sbjct: 274 LGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGS 331

Query: 306 QHDELQPRAIQ 316
             +   P  ++
Sbjct: 332 TSNRKSPFTVK 342


>gi|301787735|ref|XP_002929284.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2-like
            [Ailuropoda melanoleuca]
          Length = 4837

 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 96/328 (29%), Positives = 158/328 (48%), Gaps = 16/328 (4%)

Query: 161  SAAHVVQVSASENHAAFVLQSGQVFTCGD--NSSFCCGHRDTNRPIFRPRLVEALKGVPC 218
            SA +VVQV+        V   G+V+ CG+  N     G      PI  PR + AL     
Sbjct: 2991 SALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPI--PRQITALSSYVV 3048

Query: 219  KQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA 276
            K+V   +G      LT+ G V + G    G+LGH   ++   P+ I  L+    +  IA 
Sbjct: 3049 KKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALK-TKRIRDIAC 3107

Query: 277  GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEH 334
            G S+  A+T +G +Y++G G    LGHG+   +L+P+ ++     G  V++V+ G  D  
Sbjct: 3108 GSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLL--GHRVIQVACGSRDAQ 3165

Query: 335  VVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 394
             +AL   G V++WG G  G LG G      +P+ +  L      Q+    + +  L  +G
Sbjct: 3166 TLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSG 3225

Query: 395  SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 454
             V+ +G   +  LG    G    V +P++++ LR   +  ++ G  H + VTD G+++ +
Sbjct: 3226 VVWTWGKGDYFRLG---HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAW 3282

Query: 455  GDNERAQLGHDTLRGCLEPTEIFIQEME 482
            GDN+  Q G+ T     +PT   +Q +E
Sbjct: 3283 GDNDHGQQGNGTTTVNRKPT--LVQGLE 3308



 Score =  126 bits (316), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 93/286 (32%), Positives = 140/286 (48%), Gaps = 10/286 (3%)

Query: 183  QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 242
            +VF  G N     G    ++ I  P   E L  +   QV  G      +T+ G V+ CG 
Sbjct: 2961 KVFVWGLNDKDQLGGLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGE 3019

Query: 243  NTHGQLGHG-DTLDRPTPKSIAPLEE-VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 300
             T+G+LG G  +   P P+ I  L   V   V + +G  +  A+T +G V+S+G G +  
Sbjct: 3020 ATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGK 3079

Query: 301  LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 360
            LGH  + +  +PR I+  + K I    ++ G  H  AL SSG +YTWG G  G LGHGD 
Sbjct: 3080 LGHFSRMNCDKPRLIEALKTKRIR--DIACGSSHSAALTSSGELYTWGLGEYGRLGHGDN 3137

Query: 361  IDKTLPEPLSSLKSHLAVQVC--ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKV 418
              +  P+ +  L  H  +QV   +R  +T  L D G V+ +G   FG LG   RG S+  
Sbjct: 3138 TTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLG---RGGSEGC 3194

Query: 419  LRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 464
              P+ ++ L    V QI  G   ++ +T  G ++ +G  +  +LGH
Sbjct: 3195 NIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGH 3240



 Score =  122 bits (305), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 83/269 (30%), Positives = 131/269 (48%), Gaps = 6/269 (2%)

Query: 207  PRLVEALKGVPCKQV--TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP 264
            P L+E+++ V  K+V   +G      L+  G V++ G    G+LGHG+      P+ I  
Sbjct: 4031 PTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIES 4090

Query: 265  LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH 324
            L  +  VV +AAG ++   VT  G +Y++G G    LGH +  D+L+P+ ++  +   + 
Sbjct: 4091 LRGI-EVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVV 4149

Query: 325  VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARK 384
             V   +GD   + L     V++WG G  G LG G      +P  + SL     V+V    
Sbjct: 4150 DVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGS 4209

Query: 385  RKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV 444
            + +  L  +G+VY +G   +  LG    G  D V RPR +  L+   V  I+TG  H V 
Sbjct: 4210 QFSVALTKSGAVYTWGKGDYHRLG---HGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 4266

Query: 445  VTDRGRLFGFGDNERAQLGHDTLRGCLEP 473
             T+ G ++ +GDN+  QLG  T      P
Sbjct: 4267 CTEDGEVYTWGDNDEGQLGDGTTNAIQRP 4295



 Score =  121 bits (304), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 85/280 (30%), Positives = 139/280 (49%), Gaps = 9/280 (3%)

Query: 166  VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 225
            V V++   H   +   G+V++ G+      GH + + P  RPR++E+L+G+    V AG 
Sbjct: 4045 VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRS-PCDRPRVIESLRGIEVVDVAAGG 4103

Query: 226  NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA--AGPSYMLA 283
              +  +T  G ++T G   +G+LGH D+ D+  PK +  L+    VV +A  +G +  L 
Sbjct: 4104 AHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQG-HRVVDVACGSGDAQTLC 4162

Query: 284  VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 343
            +T +  V+S+G G    LG G       P  I +    G+ VV+V  G +  VAL  SG 
Sbjct: 4163 LTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL--TGLGVVKVECGSQFSVALTKSGA 4220

Query: 344  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 403
            VYTWGKG    LGHG +     P  +  L+    + +           + G VY +G   
Sbjct: 4221 VYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDND 4280

Query: 404  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV 443
             G LG    G ++ + RPR++ +L+   V++++ G  HT+
Sbjct: 4281 EGQLG---DGTTNAIQRPRLVAALQGKKVNRVACGSAHTL 4317



 Score =  117 bits (294), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 92/311 (29%), Positives = 151/311 (48%), Gaps = 24/311 (7%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V Q++ +E     + ++G+V+T   NS       DT      P+LV+ L      ++ A 
Sbjct: 454 VTQIACAEKRFLILSRNGRVYTQAYNS-------DT----LAPQLVQGLASRNIIKIAAH 502

Query: 225 LNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGS-VVQIAAGPS 279
            +   +L +   G V++ G    G+LGHGDT+    PK I+    ++ G  VV IA G +
Sbjct: 503 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGST 562

Query: 280 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS--AGDEHVVA 337
           Y  A+T  G +Y++G G+   LGHG   DE  P  +     KG+ V+ V+  +GD   +A
Sbjct: 563 YSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGL--KGLKVIDVACGSGDAQTLA 620

Query: 338 LDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVY 397
           +  +G V++WG G  G LG G       P+ +  L+    V+V    + +  L   G VY
Sbjct: 621 VTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVY 680

Query: 398 GFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDN 457
            +G      LG    G  + V  P++L+ L+   V  ++ G  H + +T+   +  +G N
Sbjct: 681 SWGKGDNQRLG---HGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSN 737

Query: 458 ERAQLGHDTLR 468
           ++ Q   DTLR
Sbjct: 738 DQCQ-HFDTLR 747



 Score =  102 bits (255), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 85/265 (32%), Positives = 126/265 (47%), Gaps = 12/265 (4%)

Query: 96   FLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFT 155
             L+S++H    ++  A N   + G++   L S   V+S G +  G LGHG   + C    
Sbjct: 4033 LLESIQHV--FIKKVAVN---SGGKHCLALSSEGEVYSWGEAEDGKLGHG-NRSPCDRPR 4086

Query: 156  RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 215
             I       VV V+A   H+A V  +G ++T G       GH D+   + +P+LVEAL+G
Sbjct: 4087 VIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQL-KPKLVEALQG 4145

Query: 216  VPCKQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
                 V   +G   T  LT    V + G   +G+LG G +     P  I  L  +G VV+
Sbjct: 4146 HRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLG-VVK 4204

Query: 274  IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
            +  G  + +A+T +G VY++G G    LGHG      +PR +Q    +G  V+ ++ G  
Sbjct: 4205 VECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGL--QGKKVIAIATGSL 4262

Query: 334  HVVALDSSGYVYTWGKGYCGALGHG 358
            H V     G VYTWG    G LG G
Sbjct: 4263 HCVCCTEDGEVYTWGDNDEGQLGDG 4287



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 76/247 (30%), Positives = 125/247 (50%), Gaps = 12/247 (4%)

Query: 235  GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
            G ++  G N  GQLG   G  +  PTP +++A L  V    Q+  G   + AVT +G +Y
Sbjct: 3955 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPV----QLIGGEQTLFAVTADGKLY 4010

Query: 292  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 351
            + G G+   LG G       P  +++ +   I  V V++G +H +AL S G VY+WG+  
Sbjct: 4011 ATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAE 4070

Query: 352  CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 411
             G LGHG+      P  + SL+    V V A    +  +   G +Y +G   +G LG  D
Sbjct: 4071 DGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD 4130

Query: 412  RGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG 469
               S+  L+P+++++L+ H V  ++  +G   T+ +TD   ++ +GD +  +LG     G
Sbjct: 4131 ---SEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDG 4187

Query: 470  CLEPTEI 476
            C  P +I
Sbjct: 4188 CKVPMKI 4194



 Score = 99.0 bits (245), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 78/242 (32%), Positives = 114/242 (47%), Gaps = 7/242 (2%)

Query: 119  GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
            GR+ T L  +  VFS G    G LGH      C     I       +  ++   +H+A +
Sbjct: 3057 GRHATALTVDGKVFSWGEGDDGKLGHF-SRMNCDKPRLIEALKTKRIRDIACGSSHSAAL 3115

Query: 179  LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN--FTGFLTIRGH 236
              SG+++T G       GH D N    +P++V+ L G    QV  G     T  LT  G 
Sbjct: 3116 TSSGELYTWGLGEYGRLGHGD-NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 3174

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 296
            V + G    G+LG G +     P++I  L   G V QI  G  + LA+T +GVV+++G G
Sbjct: 3175 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTWGKG 3233

Query: 297  SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 356
              F LGHG      +P+ ++  R  G  +V V+ G  H +A+  +G VY WG    G  G
Sbjct: 3234 DYFRLGHGSDVHVRKPQVVEGLR--GKKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQG 3291

Query: 357  HG 358
            +G
Sbjct: 3292 NG 3293



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 87/328 (26%), Positives = 149/328 (45%), Gaps = 26/328 (7%)

Query: 50  PQKFRSLVDLAASQLCALHSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVET 109
           P +   L +L  +Q+      +  +SRN ++    +   +     + +Q +  S +I++ 
Sbjct: 443 PIQCEGLANLGVTQIACAEKRFLILSRNGRV--YTQAYNSDTLAPQLVQGLA-SRNIIKI 499

Query: 110 SAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSA 162
           +A     + G ++  L +   V+S G    G LGHG       P+     S  +    + 
Sbjct: 500 AAH----SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQ----AG 551

Query: 163 AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 222
            HVV ++    ++A +   G+++T G  +    GH  +      P LV  LKG+    V 
Sbjct: 552 KHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVA 610

Query: 223 AGLNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 280
            G      L +   G V + G   +G+LG G +    TPK I  L+++  VV++  G  +
Sbjct: 611 CGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL-DVVKVRCGSQF 669

Query: 281 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 340
            +A+T +G VYS+G G N  LGHG +     P+ ++    +G  V+ V+AG  H +AL  
Sbjct: 670 SIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGL--QGKKVIDVAAGSTHCLALTE 727

Query: 341 SGYVYTWGKGYCGALGHGDEIDKTLPEP 368
              V++WG        H D +  T PEP
Sbjct: 728 DSEVHSWGSN--DQCQHFDTLRVTKPEP 753



 Score = 76.6 bits (187), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 58/219 (26%), Positives = 100/219 (45%), Gaps = 21/219 (9%)

Query: 271 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 330
           V QIA      L ++ NG VY+    S          D L P+ +Q    + I  +   +
Sbjct: 454 VTQIACAEKRFLILSRNGRVYTQAYNS----------DTLAPQLVQGLASRNIIKIAAHS 503

Query: 331 GDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLA----VQVCARKRK 386
              H +AL ++G VY+WG G  G LGHGD +    P+ +S+     A    V +      
Sbjct: 504 DGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTY 563

Query: 387 TFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVV 444
           +  +   G +Y +G   +G LG    G S+    P ++  L+   V  ++  +G   T+ 
Sbjct: 564 SAAITAEGELYTWGRGNYGRLG---HGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLA 620

Query: 445 VTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQEMEE 483
           VT+ G+++ +GD +  +LG     GC  P    I+++++
Sbjct: 621 VTENGQVWSWGDGDYGKLGRGGSDGCKTPK--LIEKLQD 657



 Score = 66.6 bits (161), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 66/225 (29%), Positives = 99/225 (44%), Gaps = 8/225 (3%)

Query: 116  ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
            I  G  H+  L S+  +++ G    G LGHG  TTQ +    +       V+QV+     
Sbjct: 3105 IACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQ-LKPKMVKVLLGHRVIQVACGSRD 3163

Query: 175  AA--FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            A    +   G VF+ GD      G R  +     P+ +E L G    Q+  G  F+  LT
Sbjct: 3164 AQTLALTDEGLVFSWGDGDFGKLG-RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALT 3222

Query: 233  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
              G V T G   + +LGHG  +    P+ +  L     +V +A G  + LAVT  G VY+
Sbjct: 3223 KSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRG-KKIVHVAVGALHCLAVTDAGQVYA 3281

Query: 293  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
            +G   +   G+G      +P  +Q    +G  + RV+ G  H VA
Sbjct: 3282 WGDNDHGQQGNGTTTVNRKPTLVQGL--EGQKITRVACGSSHSVA 3324



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 50/167 (29%), Positives = 76/167 (45%), Gaps = 4/167 (2%)

Query: 118  TGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
            +G   TL L  + +V+S G    G LG G  +  C    +I+  +   VV+V      + 
Sbjct: 4155 SGDAQTLCLTDDDTVWSWGDGDYGKLGRG-GSDGCKVPMKIDSLTGLGVVKVECGSQFSV 4213

Query: 177  FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
             + +SG V+T G       GH   +  + RPR V+ L+G     +  G       T  G 
Sbjct: 4214 ALTKSGAVYTWGKGDYHRLGHGSDDH-VRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGE 4272

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
            V+T G N  GQLG G T     P+ +A L+    V ++A G ++ LA
Sbjct: 4273 VYTWGDNDEGQLGDGTTNAIQRPRLVAALQG-KKVNRVACGSAHTLA 4318



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 52/169 (30%), Positives = 76/169 (44%), Gaps = 8/169 (4%)

Query: 118 TGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
           +G   TL ++ N  V+S G    G LG G  +  C +   I       VV+V      + 
Sbjct: 613 SGDAQTLAVTENGQVWSWGDGDYGKLGRG-GSDGCKTPKLIEKLQDLDVVKVRCGSQFSI 671

Query: 177 FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
            + + GQV++ G   +   GH  T   +  P+L+E L+G     V AG      LT    
Sbjct: 672 ALTKDGQVYSWGKGDNQRLGH-GTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSE 730

Query: 237 VHTCGSNTHGQLGHGDTL--DRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
           VH+ GSN   Q  H DTL   +P P ++  L +   +V IA GP+   A
Sbjct: 731 VHSWGSNDQCQ--HFDTLRVTKPEPAALPGL-DTKHIVGIACGPAQSFA 776



 Score = 52.0 bits (123), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 36/147 (24%), Positives = 71/147 (48%), Gaps = 5/147 (3%)

Query: 332  DEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 391
            D+  ++   SG +Y WG  + G LG  +     +P P  +L +   VQ+   ++  F + 
Sbjct: 3945 DDWTLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVT 4004

Query: 392  DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRG 449
              G +Y     G+G+ G    G ++ V  P +L+S++   + +++  +G  H + ++  G
Sbjct: 4005 ADGKLYA---TGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 4061

Query: 450  RLFGFGDNERAQLGHDTLRGCLEPTEI 476
             ++ +G+ E  +LGH     C  P  I
Sbjct: 4062 EVYSWGEAEDGKLGHGNRSPCDRPRVI 4088



 Score = 45.4 bits (106), Expect = 0.066,   Method: Compositional matrix adjust.
 Identities = 45/161 (27%), Positives = 74/161 (45%), Gaps = 14/161 (8%)

Query: 322  GIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG--HGDEID-KTLPEPLSSLKSHLAV 378
            G  + + +AG E    + +   V+ WG      LG   G +I   +  E LS+L     V
Sbjct: 2942 GSLIRKKAAGLESAATIRTK--VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALN---VV 2996

Query: 379  QVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSD-KVLRPRILDSLRAHHVSQIS- 436
            QV    +  F +   G VY  G    G LG    G+S   V  PR + +L ++ V +++ 
Sbjct: 2997 QVAGGSKSLFAVTVEGKVYACGEATNGRLGL---GISSGTVPIPRQITALSSYVVKKVAV 3053

Query: 437  -TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 476
             +G  H   +T  G++F +G+ +  +LGH +   C +P  I
Sbjct: 3054 HSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLI 3094


>gi|126032348|ref|NP_004658.3| E3 ubiquitin-protein ligase HERC2 [Homo sapiens]
 gi|308153453|sp|O95714.2|HERC2_HUMAN RecName: Full=E3 ubiquitin-protein ligase HERC2; AltName: Full=HECT
            domain and RCC1-like domain-containing protein 2
          Length = 4834

 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 96/328 (29%), Positives = 158/328 (48%), Gaps = 16/328 (4%)

Query: 161  SAAHVVQVSASENHAAFVLQSGQVFTCGD--NSSFCCGHRDTNRPIFRPRLVEALKGVPC 218
            SA +VVQV+        V   G+V+ CG+  N     G      PI  PR + AL     
Sbjct: 2990 SALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPI--PRQITALSSYVV 3047

Query: 219  KQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA 276
            K+V   +G      LT+ G V + G    G+LGH   ++   P+ I  L+    +  IA 
Sbjct: 3048 KKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALK-TKRIRDIAC 3106

Query: 277  GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEH 334
            G S+  A+T +G +Y++G G    LGHG+   +L+P+ ++     G  V++V+ G  D  
Sbjct: 3107 GSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLL--GHRVIQVACGSRDAQ 3164

Query: 335  VVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 394
             +AL   G V++WG G  G LG G      +P+ +  L      Q+    + +  L  +G
Sbjct: 3165 TLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSG 3224

Query: 395  SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 454
             V+ +G   +  LG    G    V +P++++ LR   +  ++ G  H + VTD G+++ +
Sbjct: 3225 VVWTWGKGDYFRLG---HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAW 3281

Query: 455  GDNERAQLGHDTLRGCLEPTEIFIQEME 482
            GDN+  Q G+ T     +PT   +Q +E
Sbjct: 3282 GDNDHGQQGNGTTTVNRKPT--LVQGLE 3307



 Score =  125 bits (315), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 93/286 (32%), Positives = 140/286 (48%), Gaps = 10/286 (3%)

Query: 183  QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 242
            +VF  G N     G    ++ I  P   E L  +   QV  G      +T+ G V+ CG 
Sbjct: 2960 KVFVWGLNDKDQLGGLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGE 3018

Query: 243  NTHGQLGHG-DTLDRPTPKSIAPLEE-VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 300
             T+G+LG G  +   P P+ I  L   V   V + +G  +  A+T +G V+S+G G +  
Sbjct: 3019 ATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGK 3078

Query: 301  LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 360
            LGH  + +  +PR I+  + K I    ++ G  H  AL SSG +YTWG G  G LGHGD 
Sbjct: 3079 LGHFSRMNCDKPRLIEALKTKRIR--DIACGSSHSAALTSSGELYTWGLGEYGRLGHGDN 3136

Query: 361  IDKTLPEPLSSLKSHLAVQVC--ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKV 418
              +  P+ +  L  H  +QV   +R  +T  L D G V+ +G   FG LG   RG S+  
Sbjct: 3137 TTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLG---RGGSEGC 3193

Query: 419  LRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 464
              P+ ++ L    V QI  G   ++ +T  G ++ +G  +  +LGH
Sbjct: 3194 NIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGH 3239



 Score =  122 bits (305), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 86/280 (30%), Positives = 139/280 (49%), Gaps = 9/280 (3%)

Query: 166  VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 225
            V V++   H   +   G+V++ G+      GH + + P  RPR++E+L+G+    V AG 
Sbjct: 4042 VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRS-PCDRPRVIESLRGIEVVDVAAGG 4100

Query: 226  NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA--AGPSYMLA 283
              +  +T  G ++T G   +G+LGH D+ D+  PK +  L+    VV IA  +G +  L 
Sbjct: 4101 AHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQG-HRVVDIACGSGDAQTLC 4159

Query: 284  VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 343
            +T +  V+S+G G    LG G       P  I +    G+ VV+V  G +  VAL  SG 
Sbjct: 4160 LTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL--TGLGVVKVECGSQFSVALTKSGA 4217

Query: 344  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 403
            VYTWGKG    LGHG +     P  +  L+    + +           + G VY +G   
Sbjct: 4218 VYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDND 4277

Query: 404  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV 443
             G LG    G ++ + RPR++ +L+   V++++ G  HT+
Sbjct: 4278 EGQLG---DGTTNAIQRPRLVAALQGKKVNRVACGSAHTL 4314



 Score =  121 bits (304), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 82/269 (30%), Positives = 131/269 (48%), Gaps = 6/269 (2%)

Query: 207  PRLVEALKGVPCKQV--TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP 264
            P L+E+++ V  K+V   +G      L+  G V++ G    G+LGHG+      P+ I  
Sbjct: 4028 PTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIES 4087

Query: 265  LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH 324
            L  +  VV +AAG ++   VT  G +Y++G G    LGH +  D+L+P+ ++  +   + 
Sbjct: 4088 LRGI-EVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVV 4146

Query: 325  VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARK 384
             +   +GD   + L     V++WG G  G LG G      +P  + SL     V+V    
Sbjct: 4147 DIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGS 4206

Query: 385  RKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV 444
            + +  L  +G+VY +G   +  LG    G  D V RPR +  L+   V  I+TG  H V 
Sbjct: 4207 QFSVALTKSGAVYTWGKGDYHRLG---HGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 4263

Query: 445  VTDRGRLFGFGDNERAQLGHDTLRGCLEP 473
             T+ G ++ +GDN+  QLG  T      P
Sbjct: 4264 CTEDGEVYTWGDNDEGQLGDGTTNAIQRP 4292



 Score =  117 bits (294), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 92/311 (29%), Positives = 151/311 (48%), Gaps = 24/311 (7%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V Q++ +E     + ++G+V+T   NS       DT      P+LV+ L      ++ A 
Sbjct: 453 VTQIACAEKRFLILSRNGRVYTQAYNS-------DT----LAPQLVQGLASRNIVKIAAH 501

Query: 225 LNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGS-VVQIAAGPS 279
            +   +L +   G V++ G    G+LGHGDT+    PK I+    ++ G  VV IA G +
Sbjct: 502 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGST 561

Query: 280 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS--AGDEHVVA 337
           Y  A+T  G +Y++G G+   LGHG   DE  P  +     KG+ V+ V+  +GD   +A
Sbjct: 562 YSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGL--KGLKVIDVACGSGDAQTLA 619

Query: 338 LDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVY 397
           +  +G V++WG G  G LG G       P+ +  L+    V+V    + +  L   G VY
Sbjct: 620 VTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVY 679

Query: 398 GFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDN 457
            +G      LG    G  + V  P++L+ L+   V  ++ G  H + +T+   +  +G N
Sbjct: 680 SWGKGDNQRLG---HGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSN 736

Query: 458 ERAQLGHDTLR 468
           ++ Q   DTLR
Sbjct: 737 DQCQ-HFDTLR 746



 Score =  102 bits (253), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 84/265 (31%), Positives = 126/265 (47%), Gaps = 12/265 (4%)

Query: 96   FLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFT 155
             L+S++H    ++  A N   + G++   L S   V+S G +  G LGHG   + C    
Sbjct: 4030 LLESIQHV--FIKKVAVN---SGGKHCLALSSEGEVYSWGEAEDGKLGHG-NRSPCDRPR 4083

Query: 156  RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 215
             I       VV V+A   H+A V  +G ++T G       GH D+   + +P+LVEAL+G
Sbjct: 4084 VIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQL-KPKLVEALQG 4142

Query: 216  VPCKQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
                 +   +G   T  LT    V + G   +G+LG G +     P  I  L  +G VV+
Sbjct: 4143 HRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLG-VVK 4201

Query: 274  IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
            +  G  + +A+T +G VY++G G    LGHG      +PR +Q    +G  V+ ++ G  
Sbjct: 4202 VECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGL--QGKKVIAIATGSL 4259

Query: 334  HVVALDSSGYVYTWGKGYCGALGHG 358
            H V     G VYTWG    G LG G
Sbjct: 4260 HCVCCTEDGEVYTWGDNDEGQLGDG 4284



 Score =  101 bits (252), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 77/247 (31%), Positives = 125/247 (50%), Gaps = 12/247 (4%)

Query: 235  GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
            G ++  G N  GQLG   G  +  PTP +++A L  V    Q+  G   + AVT +G +Y
Sbjct: 3952 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPV----QLIGGEQTLFAVTADGKLY 4007

Query: 292  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 351
            + G G+   LG G       P  +++ +   I  V V++G +H +AL S G VY+WG+  
Sbjct: 4008 ATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAE 4067

Query: 352  CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 411
             G LGHG+      P  + SL+    V V A    +  +   G +Y +G   +G LG  D
Sbjct: 4068 DGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD 4127

Query: 412  RGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG 469
               S+  L+P+++++L+ H V  I+  +G   T+ +TD   ++ +GD +  +LG     G
Sbjct: 4128 ---SEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDG 4184

Query: 470  CLEPTEI 476
            C  P +I
Sbjct: 4185 CKVPMKI 4191



 Score = 99.8 bits (247), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 79/242 (32%), Positives = 114/242 (47%), Gaps = 7/242 (2%)

Query: 119  GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
            GR+ T L  +  VFS G    G LGH      C     I       +  ++   +H+A +
Sbjct: 3056 GRHATALTVDGKVFSWGEGDDGKLGHF-SRMNCDKPRLIEALKTKRIRDIACGSSHSAAL 3114

Query: 179  LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN--FTGFLTIRGH 236
              SG+++T G       GH D N    +P++V+ L G    QV  G     T  LT  G 
Sbjct: 3115 TSSGELYTWGLGEYGRLGHGD-NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 3173

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 296
            V + G    G+LG G +     P++I  L   G V QI  G  + LA+T +GVV+++G G
Sbjct: 3174 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTWGKG 3232

Query: 297  SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 356
              F LGHG      +P+ ++  R  G  +V V+ G  H +A+  SG VY WG    G  G
Sbjct: 3233 DYFRLGHGSDVHVRKPQVVEGLR--GKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQG 3290

Query: 357  HG 358
            +G
Sbjct: 3291 NG 3292



 Score = 98.2 bits (243), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 88/328 (26%), Positives = 149/328 (45%), Gaps = 26/328 (7%)

Query: 50  PQKFRSLVDLAASQLCALHSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVET 109
           P +   L +L  +Q+      +  +SRN ++    +   +     + +Q +  S +IV+ 
Sbjct: 442 PIQCEGLANLGVTQIACAEKRFLILSRNGRV--YTQAYNSDTLAPQLVQGLA-SRNIVKI 498

Query: 110 SAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSA 162
           +A     + G ++  L +   V+S G    G LGHG       P+     S  +    + 
Sbjct: 499 AAH----SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQ----AG 550

Query: 163 AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 222
            HVV ++    ++A +   G+++T G  +    GH  +      P LV  LKG+    V 
Sbjct: 551 KHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVA 609

Query: 223 AGLNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 280
            G      L +   G V + G   +G+LG G +    TPK I  L+++  VV++  G  +
Sbjct: 610 CGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL-DVVKVRCGSQF 668

Query: 281 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 340
            +A+T +G VYS+G G N  LGHG +     P+ ++    +G  V+ V+AG  H +AL  
Sbjct: 669 SIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGL--QGKKVIDVAAGSTHCLALTE 726

Query: 341 SGYVYTWGKGYCGALGHGDEIDKTLPEP 368
              V++WG        H D +  T PEP
Sbjct: 727 DSEVHSWGSN--DQCQHFDTLRVTKPEP 752



 Score = 76.3 bits (186), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 58/219 (26%), Positives = 100/219 (45%), Gaps = 21/219 (9%)

Query: 271 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 330
           V QIA      L ++ NG VY+    S          D L P+ +Q    + I  +   +
Sbjct: 453 VTQIACAEKRFLILSRNGRVYTQAYNS----------DTLAPQLVQGLASRNIVKIAAHS 502

Query: 331 GDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLA----VQVCARKRK 386
              H +AL ++G VY+WG G  G LGHGD +    P+ +S+     A    V +      
Sbjct: 503 DGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTY 562

Query: 387 TFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVV 444
           +  +   G +Y +G   +G LG    G S+    P ++  L+   V  ++  +G   T+ 
Sbjct: 563 SAAITAEGELYTWGRGNYGRLG---HGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLA 619

Query: 445 VTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQEMEE 483
           VT+ G+++ +GD +  +LG     GC  P    I+++++
Sbjct: 620 VTENGQVWSWGDGDYGKLGRGGSDGCKTPK--LIEKLQD 656



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 66/225 (29%), Positives = 100/225 (44%), Gaps = 8/225 (3%)

Query: 116  ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
            I  G  H+  L S+  +++ G    G LGHG  TTQ +    +       V+QV+     
Sbjct: 3104 IACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQ-LKPKMVKVLLGHRVIQVACGSRD 3162

Query: 175  AA--FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            A    +   G VF+ GD      G R  +     P+ +E L G    Q+  G  F+  LT
Sbjct: 3163 AQTLALTDEGLVFSWGDGDFGKLG-RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALT 3221

Query: 233  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
              G V T G   + +LGHG  +    P+ +  L     +V +A G  + LAVT +G VY+
Sbjct: 3222 KSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRG-KKIVHVAVGALHCLAVTDSGQVYA 3280

Query: 293  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
            +G   +   G+G      +P  +Q    +G  + RV+ G  H VA
Sbjct: 3281 WGDNDHGQQGNGTTTVNRKPTLVQGL--EGQKITRVACGSSHSVA 3323



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 50/167 (29%), Positives = 76/167 (45%), Gaps = 4/167 (2%)

Query: 118  TGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
            +G   TL L  + +V+S G    G LG G  +  C    +I+  +   VV+V      + 
Sbjct: 4152 SGDAQTLCLTDDDTVWSWGDGDYGKLGRG-GSDGCKVPMKIDSLTGLGVVKVECGSQFSV 4210

Query: 177  FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
             + +SG V+T G       GH   +  + RPR V+ L+G     +  G       T  G 
Sbjct: 4211 ALTKSGAVYTWGKGDYHRLGHGSDDH-VRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGE 4269

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
            V+T G N  GQLG G T     P+ +A L+    V ++A G ++ LA
Sbjct: 4270 VYTWGDNDEGQLGDGTTNAIQRPRLVAALQG-KKVNRVACGSAHTLA 4315



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 52/169 (30%), Positives = 76/169 (44%), Gaps = 8/169 (4%)

Query: 118 TGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
           +G   TL ++ N  V+S G    G LG G  +  C +   I       VV+V      + 
Sbjct: 612 SGDAQTLAVTENGQVWSWGDGDYGKLGRG-GSDGCKTPKLIEKLQDLDVVKVRCGSQFSI 670

Query: 177 FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
            + + GQV++ G   +   GH  T   +  P+L+E L+G     V AG      LT    
Sbjct: 671 ALTKDGQVYSWGKGDNQRLGH-GTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSE 729

Query: 237 VHTCGSNTHGQLGHGDTL--DRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
           VH+ GSN   Q  H DTL   +P P ++  L +   +V IA GP+   A
Sbjct: 730 VHSWGSNDQCQ--HFDTLRVTKPEPAALPGL-DTKHIVGIACGPAQSFA 775



 Score = 52.0 bits (123), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 36/147 (24%), Positives = 71/147 (48%), Gaps = 5/147 (3%)

Query: 332  DEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 391
            D+  ++   SG +Y WG  + G LG  +     +P P  +L +   VQ+   ++  F + 
Sbjct: 3942 DDWTLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVT 4001

Query: 392  DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRG 449
              G +Y     G+G+ G    G ++ V  P +L+S++   + +++  +G  H + ++  G
Sbjct: 4002 ADGKLYA---TGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 4058

Query: 450  RLFGFGDNERAQLGHDTLRGCLEPTEI 476
             ++ +G+ E  +LGH     C  P  I
Sbjct: 4059 EVYSWGEAEDGKLGHGNRSPCDRPRVI 4085



 Score = 45.4 bits (106), Expect = 0.069,   Method: Compositional matrix adjust.
 Identities = 41/139 (29%), Positives = 65/139 (46%), Gaps = 12/139 (8%)

Query: 344  VYTWGKGYCGALG--HGDEID-KTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 400
            V+ WG      LG   G +I   +  E LS+L     VQV    +  F +   G VY  G
Sbjct: 2961 VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALN---VVQVAGGSKSLFAVTVEGKVYACG 3017

Query: 401  WMGFGSLGFPDRGVSD-KVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDN 457
                G LG    G+S   V  PR + +L ++ V +++  +G  H   +T  G++F +G+ 
Sbjct: 3018 EATNGRLGL---GISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEG 3074

Query: 458  ERAQLGHDTLRGCLEPTEI 476
            +  +LGH +   C +P  I
Sbjct: 3075 DDGKLGHFSRMNCDKPRLI 3093


>gi|344247622|gb|EGW03726.1| putative E3 ubiquitin-protein ligase HERC4 [Cricetulus griseus]
          Length = 835

 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 91/276 (32%), Positives = 142/276 (51%), Gaps = 10/276 (3%)

Query: 204 IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 263
           +  PR  +       + V  GL  T F+   G V+TCG N  GQLGH  +  R  P+ + 
Sbjct: 22  VLEPRKSDFFANKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKS--RKKPEQVV 79

Query: 264 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH-GEQHDELQPRAIQTFRRKG 322
            L+   ++V ++ G ++ LA+   G VYS+G  S+  LG  G +     PR I++     
Sbjct: 80  ALD-AQNIVAVSCGEAHTLALNDKGQVYSWGLDSDGQLGLLGSEEYIRVPRNIKSL--SD 136

Query: 323 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK-TLPEPLSSLKSHLAVQVC 381
           I +V+V+ G  H +AL  +  V+ WG+   G LG G +  K T P+ + SL     +QV 
Sbjct: 137 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQTSPQLIKSLLGIPFMQVA 196

Query: 382 ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYH 441
           A    +FVL  +G+++G+G   FG LG  D   +D+ + P +L SLR+  +  I  G  H
Sbjct: 197 AGGAHSFVLTLSGAIFGWGRNKFGQLGLNDE--NDRYV-PNLLKSLRSQKIVYICCGEDH 253

Query: 442 TVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF 477
           T  +T  G +F FG     QLGH++    + P ++F
Sbjct: 254 TAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVF 289



 Score =  125 bits (313), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 97/309 (31%), Positives = 146/309 (47%), Gaps = 12/309 (3%)

Query: 158 NFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVP 217
           +F +   V  V     H  FVL  G V+TCG N     GH  + +   +P  V AL    
Sbjct: 29  DFFANKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRK---KPEQVVALDAQN 85

Query: 218 CKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGH-GDTLDRPTPKSIAPLEEVGSVVQIAA 276
              V+ G   T  L  +G V++ G ++ GQLG  G       P++I  L ++  +VQ+A 
Sbjct: 86  IVAVSCGEAHTLALNDKGQVYSWGLDSDGQLGLLGSEEYIRVPRNIKSLSDI-QIVQVAC 144

Query: 277 GPSYMLAVTGNGVVYSFGSGSNFCLGHG-EQHDELQPRAIQTFRRKGIHVVRVSAGDEHV 335
           G  + LA++    V+ +G      LG G +   +  P+ I++    GI  ++V+AG  H 
Sbjct: 145 GYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQTSPQLIKSLL--GIPFMQVAAGGAHS 202

Query: 336 VALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGS 395
             L  SG ++ WG+   G LG  DE D+ +P  L SL+S   V +C  +  T  L   G 
Sbjct: 203 FVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGG 262

Query: 396 VYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHT-VVVTDRGRLFGF 454
           V+ FG  G+G LG      +   + PR +  L    V+Q++ G  HT   V   GR++ F
Sbjct: 263 VFTFGAGGYGQLG---HNSTSHEINPRKVFELMGSIVTQVACGRQHTSAFVPSSGRIYSF 319

Query: 455 GDNERAQLG 463
           G     QLG
Sbjct: 320 GLGGNGQLG 328



 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 81/291 (27%), Positives = 139/291 (47%), Gaps = 8/291 (2%)

Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 179
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V VS  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVSCGEAHTLALN 100

Query: 180 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 239
             GQV++ G +S    G   +   I  PR +++L  +   QV  G   +  L+    V  
Sbjct: 101 DKGQVYSWGLDSDGQLGLLGSEEYIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFC 160

Query: 240 CGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
            G N +GQLG G D   + +P+ I  L  +   +Q+AAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKYGQLGLGIDCKKQTSPQLIKSLLGI-PFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 299 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 358
             LG  +++D   P  +++ R + I  V +  G++H  AL   G V+T+G G  G LGH 
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRSQKI--VYICCGEDHTAALTKEGGVFTFGAGGYGQLGHN 277

Query: 359 DEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLG 408
               +  P  +  L   +  QV C R+  +  +  +G +Y FG  G G LG
Sbjct: 278 STSHEINPRKVFELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score = 98.6 bits (244), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 82/272 (30%), Positives = 126/272 (46%), Gaps = 6/272 (2%)

Query: 98  QSVEHSSDIVETSAGNM-QITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFT 155
           +S +    +V   A N+  ++ G  HTL +++   V+S G    G LG            
Sbjct: 70  KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYSWGLDSDGQLGLLGSEEYIRVPR 129

Query: 156 RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 215
            I   S   +VQV+    H+  + ++ +VF  G N     G     +    P+L+++L G
Sbjct: 130 NIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQTSPQLIKSLLG 189

Query: 216 VPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA 275
           +P  QV AG   +  LT+ G +   G N  GQLG  D  DR  P  +  L     +V I 
Sbjct: 190 IPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRS-QKIVYIC 248

Query: 276 AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHV 335
            G  +  A+T  G V++FG+G    LGH     E+ PR +  F   G  V +V+ G +H 
Sbjct: 249 CGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQVACGRQHT 306

Query: 336 VA-LDSSGYVYTWGKGYCGALGHGDEIDKTLP 366
            A + SSG +Y++G G  G LG G   ++  P
Sbjct: 307 SAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338



 Score = 79.3 bits (194), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 70/229 (30%), Positives = 109/229 (47%), Gaps = 11/229 (4%)

Query: 91  KRVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETT 149
           +  +R  ++++  SDI       +Q+  G YH+L +S +S VF  G +  G LG G +  
Sbjct: 122 EEYIRVPRNIKSLSDI-----QIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCK 176

Query: 150 QCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRL 209
           +  S   I        +QV+A   H+  +  SG +F  G N     G  D N   + P L
Sbjct: 177 KQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDR-YVPNL 235

Query: 210 VEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG 269
           +++L+      +  G + T  LT  G V T G+  +GQLGH  T     P+ +   E +G
Sbjct: 236 LKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMG 293

Query: 270 SVV-QIAAGPSYMLA-VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQ 316
           S+V Q+A G  +  A V  +G +YSFG G N  LG G   +   P  ++
Sbjct: 294 SIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342


>gi|354477678|ref|XP_003501046.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
           [Cricetulus griseus]
          Length = 1057

 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 91/276 (32%), Positives = 142/276 (51%), Gaps = 10/276 (3%)

Query: 204 IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 263
           +  PR  +       + V  GL  T F+   G V+TCG N  GQLGH  +  R  P+ + 
Sbjct: 22  VLEPRKSDFFANKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKS--RKKPEQVV 79

Query: 264 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH-GEQHDELQPRAIQTFRRKG 322
            L+   ++V ++ G ++ LA+   G VYS+G  S+  LG  G +     PR I++     
Sbjct: 80  ALD-AQNIVAVSCGEAHTLALNDKGQVYSWGLDSDGQLGLLGSEEYIRVPRNIKSL--SD 136

Query: 323 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK-TLPEPLSSLKSHLAVQVC 381
           I +V+V+ G  H +AL  +  V+ WG+   G LG G +  K T P+ + SL     +QV 
Sbjct: 137 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQTSPQLIKSLLGIPFMQVA 196

Query: 382 ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYH 441
           A    +FVL  +G+++G+G   FG LG  D   +D+ + P +L SLR+  +  I  G  H
Sbjct: 197 AGGAHSFVLTLSGAIFGWGRNKFGQLGLNDE--NDRYV-PNLLKSLRSQKIVYICCGEDH 253

Query: 442 TVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF 477
           T  +T  G +F FG     QLGH++    + P ++F
Sbjct: 254 TAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVF 289



 Score =  125 bits (314), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 104/333 (31%), Positives = 156/333 (46%), Gaps = 13/333 (3%)

Query: 135 GSSLCGVLGHGPETTQCVSFTRI-NFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSF 193
           G++  G LG G    + V   R  +F +   V  V     H  FVL  G V+TCG N   
Sbjct: 5   GNASYGQLGLGGIDEEIVLEPRKSDFFANKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLG 64

Query: 194 CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGH-GD 252
             GH  + +   +P  V AL       V+ G   T  L  +G V++ G ++ GQLG  G 
Sbjct: 65  QLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYSWGLDSDGQLGLLGS 121

Query: 253 TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHG-EQHDELQ 311
                 P++I  L ++  +VQ+A G  + LA++    V+ +G      LG G +   +  
Sbjct: 122 EEYIRVPRNIKSLSDI-QIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQTS 180

Query: 312 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSS 371
           P+ I++    GI  ++V+AG  H   L  SG ++ WG+   G LG  DE D+ +P  L S
Sbjct: 181 PQLIKSLL--GIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKS 238

Query: 372 LKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHH 431
           L+S   V +C  +  T  L   G V+ FG  G+G LG      +   + PR +  L    
Sbjct: 239 LRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG---HNSTSHEINPRKVFELMGSI 295

Query: 432 VSQISTGLYHT-VVVTDRGRLFGFGDNERAQLG 463
           V+Q++ G  HT   V   GR++ FG     QLG
Sbjct: 296 VTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  111 bits (277), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 81/291 (27%), Positives = 139/291 (47%), Gaps = 8/291 (2%)

Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 179
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V VS  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVSCGEAHTLALN 100

Query: 180 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 239
             GQV++ G +S    G   +   I  PR +++L  +   QV  G   +  L+    V  
Sbjct: 101 DKGQVYSWGLDSDGQLGLLGSEEYIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFC 160

Query: 240 CGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
            G N +GQLG G D   + +P+ I  L  +   +Q+AAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKYGQLGLGIDCKKQTSPQLIKSLLGI-PFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 299 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 358
             LG  +++D   P  +++ R + I  V +  G++H  AL   G V+T+G G  G LGH 
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRSQKI--VYICCGEDHTAALTKEGGVFTFGAGGYGQLGHN 277

Query: 359 DEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLG 408
               +  P  +  L   +  QV C R+  +  +  +G +Y FG  G G LG
Sbjct: 278 STSHEINPRKVFELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score = 99.0 bits (245), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 82/272 (30%), Positives = 126/272 (46%), Gaps = 6/272 (2%)

Query: 98  QSVEHSSDIVETSAGNM-QITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFT 155
           +S +    +V   A N+  ++ G  HTL +++   V+S G    G LG            
Sbjct: 70  KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYSWGLDSDGQLGLLGSEEYIRVPR 129

Query: 156 RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 215
            I   S   +VQV+    H+  + ++ +VF  G N     G     +    P+L+++L G
Sbjct: 130 NIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQTSPQLIKSLLG 189

Query: 216 VPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA 275
           +P  QV AG   +  LT+ G +   G N  GQLG  D  DR  P  +  L     +V I 
Sbjct: 190 IPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRS-QKIVYIC 248

Query: 276 AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHV 335
            G  +  A+T  G V++FG+G    LGH     E+ PR +  F   G  V +V+ G +H 
Sbjct: 249 CGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQVACGRQHT 306

Query: 336 VA-LDSSGYVYTWGKGYCGALGHGDEIDKTLP 366
            A + SSG +Y++G G  G LG G   ++  P
Sbjct: 307 SAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338



 Score = 79.7 bits (195), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 66/206 (32%), Positives = 99/206 (48%), Gaps = 6/206 (2%)

Query: 114 MQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +Q+  G YH+L +S +S VF  G +  G LG G +  +  S   I        +QV+A  
Sbjct: 140 VQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQTSPQLIKSLLGIPFMQVAAGG 199

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            H+  +  SG +F  G N     G  D N   + P L+++L+      +  G + T  LT
Sbjct: 200 AHSFVLTLSGAIFGWGRNKFGQLGLNDENDR-YVPNLLKSLRSQKIVYICCGEDHTAALT 258

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVV 290
             G V T G+  +GQLGH  T     P+ +   E +GS+V Q+A G  +  A V  +G +
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQVACGRQHTSAFVPSSGRI 316

Query: 291 YSFGSGSNFCLGHGEQHDELQPRAIQ 316
           YSFG G N  LG G   +   P  ++
Sbjct: 317 YSFGLGGNGQLGTGSTSNRKSPFTVK 342


>gi|4079809|gb|AAD08657.1| HERC2 [Homo sapiens]
          Length = 4834

 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 96/328 (29%), Positives = 158/328 (48%), Gaps = 16/328 (4%)

Query: 161  SAAHVVQVSASENHAAFVLQSGQVFTCGD--NSSFCCGHRDTNRPIFRPRLVEALKGVPC 218
            SA +VVQV+        V   G+V+ CG+  N     G      PI  PR + AL     
Sbjct: 2990 SALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPI--PRQITALSSYVV 3047

Query: 219  KQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA 276
            K+V   +G      LT+ G V + G    G+LGH   ++   P+ I  L+    +  IA 
Sbjct: 3048 KKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALK-TKRIRDIAC 3106

Query: 277  GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEH 334
            G S+  A+T +G +Y++G G    LGHG+   +L+P+ ++     G  V++V+ G  D  
Sbjct: 3107 GSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLL--GHRVIQVACGSRDAQ 3164

Query: 335  VVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 394
             +AL   G V++WG G  G LG G      +P+ +  L      Q+    + +  L  +G
Sbjct: 3165 TLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSG 3224

Query: 395  SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 454
             V+ +G   +  LG    G    V +P++++ LR   +  ++ G  H + VTD G+++ +
Sbjct: 3225 VVWTWGKGDYFRLG---HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAW 3281

Query: 455  GDNERAQLGHDTLRGCLEPTEIFIQEME 482
            GDN+  Q G+ T     +PT   +Q +E
Sbjct: 3282 GDNDHGQQGNGTTTVNRKPT--LVQGLE 3307



 Score =  125 bits (315), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 93/286 (32%), Positives = 140/286 (48%), Gaps = 10/286 (3%)

Query: 183  QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 242
            +VF  G N     G    ++ I  P   E L  +   QV  G      +T+ G V+ CG 
Sbjct: 2960 KVFVWGLNDKDQLGGLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGE 3018

Query: 243  NTHGQLGHG-DTLDRPTPKSIAPLEE-VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 300
             T+G+LG G  +   P P+ I  L   V   V + +G  +  A+T +G V+S+G G +  
Sbjct: 3019 ATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGK 3078

Query: 301  LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 360
            LGH  + +  +PR I+  + K I    ++ G  H  AL SSG +YTWG G  G LGHGD 
Sbjct: 3079 LGHFSRMNCDKPRLIEALKTKRIR--DIACGSSHSAALTSSGELYTWGLGEYGRLGHGDN 3136

Query: 361  IDKTLPEPLSSLKSHLAVQVC--ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKV 418
              +  P+ +  L  H  +QV   +R  +T  L D G V+ +G   FG LG   RG S+  
Sbjct: 3137 TTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLG---RGGSEGC 3193

Query: 419  LRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 464
              P+ ++ L    V QI  G   ++ +T  G ++ +G  +  +LGH
Sbjct: 3194 NIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGH 3239



 Score =  122 bits (305), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 86/280 (30%), Positives = 139/280 (49%), Gaps = 9/280 (3%)

Query: 166  VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 225
            V V++   H   +   G+V++ G+      GH + + P  RPR++E+L+G+    V AG 
Sbjct: 4042 VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRS-PCDRPRVIESLRGIEVVDVAAGG 4100

Query: 226  NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA--AGPSYMLA 283
              +  +T  G ++T G   +G+LGH D+ D+  PK +  L+    VV IA  +G +  L 
Sbjct: 4101 AHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQG-HRVVDIACGSGDAQTLC 4159

Query: 284  VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 343
            +T +  V+S+G G    LG G       P  I +    G+ VV+V  G +  VAL  SG 
Sbjct: 4160 LTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL--TGLGVVKVECGSQFSVALTKSGA 4217

Query: 344  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 403
            VYTWGKG    LGHG +     P  +  L+    + +           + G VY +G   
Sbjct: 4218 VYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDND 4277

Query: 404  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV 443
             G LG    G ++ + RPR++ +L+   V++++ G  HT+
Sbjct: 4278 EGQLG---DGTTNAIQRPRLVAALQGKKVNRVACGSAHTL 4314



 Score =  121 bits (303), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 82/269 (30%), Positives = 131/269 (48%), Gaps = 6/269 (2%)

Query: 207  PRLVEALKGVPCKQV--TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP 264
            P L+E+++ V  K+V   +G      L+  G V++ G    G+LGHG+      P+ I  
Sbjct: 4028 PTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIES 4087

Query: 265  LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH 324
            L  +  VV +AAG ++   VT  G +Y++G G    LGH +  D+L+P+ ++  +   + 
Sbjct: 4088 LRGI-EVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVV 4146

Query: 325  VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARK 384
             +   +GD   + L     V++WG G  G LG G      +P  + SL     V+V    
Sbjct: 4147 DIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGS 4206

Query: 385  RKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV 444
            + +  L  +G+VY +G   +  LG    G  D V RPR +  L+   V  I+TG  H V 
Sbjct: 4207 QFSVALTKSGAVYTWGKGDYHRLG---HGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 4263

Query: 445  VTDRGRLFGFGDNERAQLGHDTLRGCLEP 473
             T+ G ++ +GDN+  QLG  T      P
Sbjct: 4264 CTEDGEVYTWGDNDEGQLGDGTTNAIQRP 4292



 Score =  117 bits (294), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 92/311 (29%), Positives = 151/311 (48%), Gaps = 24/311 (7%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V Q++ +E     + ++G+V+T   NS       DT      P+LV+ L      ++ A 
Sbjct: 453 VTQIACAEKRFLILSRNGRVYTQAYNS-------DT----LAPQLVQGLASRNIVKIAAH 501

Query: 225 LNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGS-VVQIAAGPS 279
            +   +L +   G V++ G    G+LGHGDT+    PK I+    ++ G  VV IA G +
Sbjct: 502 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGST 561

Query: 280 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS--AGDEHVVA 337
           Y  A+T  G +Y++G G+   LGHG   DE  P  +     KG+ V+ V+  +GD   +A
Sbjct: 562 YSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGL--KGLKVIDVACGSGDAQTLA 619

Query: 338 LDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVY 397
           +  +G V++WG G  G LG G       P+ +  L+    V+V    + +  L   G VY
Sbjct: 620 VTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVY 679

Query: 398 GFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDN 457
            +G      LG    G  + V  P++L+ L+   V  ++ G  H + +T+   +  +G N
Sbjct: 680 SWGKGDNQRLG---HGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSN 736

Query: 458 ERAQLGHDTLR 468
           ++ Q   DTLR
Sbjct: 737 DQCQ-HFDTLR 746



 Score =  102 bits (253), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 84/265 (31%), Positives = 126/265 (47%), Gaps = 12/265 (4%)

Query: 96   FLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFT 155
             L+S++H    ++  A N   + G++   L S   V+S G +  G LGHG   + C    
Sbjct: 4030 LLESIQHV--FIKKVAVN---SGGKHCLALSSEGEVYSWGEAEDGKLGHG-NRSPCDRPR 4083

Query: 156  RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 215
             I       VV V+A   H+A V  +G ++T G       GH D+   + +P+LVEAL+G
Sbjct: 4084 VIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQL-KPKLVEALQG 4142

Query: 216  VPCKQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
                 +   +G   T  LT    V + G   +G+LG G +     P  I  L  +G VV+
Sbjct: 4143 HRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLG-VVK 4201

Query: 274  IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
            +  G  + +A+T +G VY++G G    LGHG      +PR +Q    +G  V+ ++ G  
Sbjct: 4202 VECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGL--QGKKVIAIATGSL 4259

Query: 334  HVVALDSSGYVYTWGKGYCGALGHG 358
            H V     G VYTWG    G LG G
Sbjct: 4260 HCVCCTEDGEVYTWGDNDEGQLGDG 4284



 Score =  101 bits (252), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 77/247 (31%), Positives = 125/247 (50%), Gaps = 12/247 (4%)

Query: 235  GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
            G ++  G N  GQLG   G  +  PTP +++A L  V    Q+  G   + AVT +G +Y
Sbjct: 3952 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPV----QLIGGEQTLFAVTADGKLY 4007

Query: 292  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 351
            + G G+   LG G       P  +++ +   I  V V++G +H +AL S G VY+WG+  
Sbjct: 4008 ATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAE 4067

Query: 352  CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 411
             G LGHG+      P  + SL+    V V A    +  +   G +Y +G   +G LG  D
Sbjct: 4068 DGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD 4127

Query: 412  RGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG 469
               S+  L+P+++++L+ H V  I+  +G   T+ +TD   ++ +GD +  +LG     G
Sbjct: 4128 ---SEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDG 4184

Query: 470  CLEPTEI 476
            C  P +I
Sbjct: 4185 CKVPMKI 4191



 Score = 99.8 bits (247), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 79/242 (32%), Positives = 114/242 (47%), Gaps = 7/242 (2%)

Query: 119  GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
            GR+ T L  +  VFS G    G LGH      C     I       +  ++   +H+A +
Sbjct: 3056 GRHATALTVDGKVFSWGEGDDGKLGHF-SRMNCDKPRLIEALKTKRIRDIACGSSHSAAL 3114

Query: 179  LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN--FTGFLTIRGH 236
              SG+++T G       GH D N    +P++V+ L G    QV  G     T  LT  G 
Sbjct: 3115 TSSGELYTWGLGEYGRLGHGD-NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 3173

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 296
            V + G    G+LG G +     P++I  L   G V QI  G  + LA+T +GVV+++G G
Sbjct: 3174 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTWGKG 3232

Query: 297  SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 356
              F LGHG      +P+ ++  R  G  +V V+ G  H +A+  SG VY WG    G  G
Sbjct: 3233 DYFRLGHGSDVHVRKPQVVEGLR--GKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQG 3290

Query: 357  HG 358
            +G
Sbjct: 3291 NG 3292



 Score = 98.2 bits (243), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 88/328 (26%), Positives = 149/328 (45%), Gaps = 26/328 (7%)

Query: 50  PQKFRSLVDLAASQLCALHSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVET 109
           P +   L +L  +Q+      +  +SRN ++    +   +     + +Q +  S +IV+ 
Sbjct: 442 PIQCEGLANLGVTQIACAEKRFLILSRNGRV--YTQAYNSDTLAPQLVQGLA-SRNIVKI 498

Query: 110 SAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSA 162
           +A     + G ++  L +   V+S G    G LGHG       P+     S  +    + 
Sbjct: 499 AAH----SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQ----AG 550

Query: 163 AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 222
            HVV ++    ++A +   G+++T G  +    GH  +      P LV  LKG+    V 
Sbjct: 551 KHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVA 609

Query: 223 AGLNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 280
            G      L +   G V + G   +G+LG G +    TPK I  L+++  VV++  G  +
Sbjct: 610 CGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL-DVVKVRCGSQF 668

Query: 281 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 340
            +A+T +G VYS+G G N  LGHG +     P+ ++    +G  V+ V+AG  H +AL  
Sbjct: 669 SIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGL--QGKKVIDVAAGSTHCLALTE 726

Query: 341 SGYVYTWGKGYCGALGHGDEIDKTLPEP 368
              V++WG        H D +  T PEP
Sbjct: 727 DSEVHSWGSN--DQCQHFDTLRVTKPEP 752



 Score = 76.3 bits (186), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 58/219 (26%), Positives = 100/219 (45%), Gaps = 21/219 (9%)

Query: 271 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 330
           V QIA      L ++ NG VY+    S          D L P+ +Q    + I  +   +
Sbjct: 453 VTQIACAEKRFLILSRNGRVYTQAYNS----------DTLAPQLVQGLASRNIVKIAAHS 502

Query: 331 GDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLA----VQVCARKRK 386
              H +AL ++G VY+WG G  G LGHGD +    P+ +S+     A    V +      
Sbjct: 503 DGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTY 562

Query: 387 TFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVV 444
           +  +   G +Y +G   +G LG    G S+    P ++  L+   V  ++  +G   T+ 
Sbjct: 563 SAAITAEGELYTWGRGNYGRLG---HGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLA 619

Query: 445 VTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQEMEE 483
           VT+ G+++ +GD +  +LG     GC  P    I+++++
Sbjct: 620 VTENGQVWSWGDGDYGKLGRGGSDGCKTPK--LIEKLQD 656



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 66/225 (29%), Positives = 100/225 (44%), Gaps = 8/225 (3%)

Query: 116  ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
            I  G  H+  L S+  +++ G    G LGHG  TTQ +    +       V+QV+     
Sbjct: 3104 IACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQ-LKPKMVKVLLGHRVIQVACGSRD 3162

Query: 175  AA--FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            A    +   G VF+ GD      G R  +     P+ +E L G    Q+  G  F+  LT
Sbjct: 3163 AQTLALTDEGLVFSWGDGDFGKLG-RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALT 3221

Query: 233  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
              G V T G   + +LGHG  +    P+ +  L     +V +A G  + LAVT +G VY+
Sbjct: 3222 KSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRG-KKIVHVAVGALHCLAVTDSGQVYA 3280

Query: 293  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
            +G   +   G+G      +P  +Q    +G  + RV+ G  H VA
Sbjct: 3281 WGDNDHGQQGNGTTTVNRKPTLVQGL--EGQKITRVACGSSHSVA 3323



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 50/167 (29%), Positives = 76/167 (45%), Gaps = 4/167 (2%)

Query: 118  TGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
            +G   TL L  + +V+S G    G LG G  +  C    +I+  +   VV+V      + 
Sbjct: 4152 SGDAQTLCLTDDDTVWSWGDGDYGKLGRG-GSDGCKVPMKIDSLTGLGVVKVECGSQFSV 4210

Query: 177  FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
             + +SG V+T G       GH   +  + RPR V+ L+G     +  G       T  G 
Sbjct: 4211 ALTKSGAVYTWGKGDYHRLGHGSDDH-VRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGE 4269

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
            V+T G N  GQLG G T     P+ +A L+    V ++A G ++ LA
Sbjct: 4270 VYTWGDNDEGQLGDGTTNAIQRPRLVAALQG-KKVNRVACGSAHTLA 4315



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 52/169 (30%), Positives = 76/169 (44%), Gaps = 8/169 (4%)

Query: 118 TGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
           +G   TL ++ N  V+S G    G LG G  +  C +   I       VV+V      + 
Sbjct: 612 SGDAQTLAVTENGQVWSWGDGDYGKLGRG-GSDGCKTPKLIEKLQDLDVVKVRCGSQFSI 670

Query: 177 FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
            + + GQV++ G   +   GH  T   +  P+L+E L+G     V AG      LT    
Sbjct: 671 ALTKDGQVYSWGKGDNQRLGH-GTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSE 729

Query: 237 VHTCGSNTHGQLGHGDTL--DRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
           VH+ GSN   Q  H DTL   +P P ++  L +   +V IA GP+   A
Sbjct: 730 VHSWGSNDQCQ--HFDTLRVTKPEPAALPGL-DTKHIVGIACGPAQSFA 775



 Score = 52.0 bits (123), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 36/147 (24%), Positives = 71/147 (48%), Gaps = 5/147 (3%)

Query: 332  DEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 391
            D+  ++   SG +Y WG  + G LG  +     +P P  +L +   VQ+   ++  F + 
Sbjct: 3942 DDWTLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVT 4001

Query: 392  DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRG 449
              G +Y     G+G+ G    G ++ V  P +L+S++   + +++  +G  H + ++  G
Sbjct: 4002 ADGKLYA---TGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 4058

Query: 450  RLFGFGDNERAQLGHDTLRGCLEPTEI 476
             ++ +G+ E  +LGH     C  P  I
Sbjct: 4059 EVYSWGEAEDGKLGHGNRSPCDRPRVI 4085



 Score = 45.4 bits (106), Expect = 0.069,   Method: Compositional matrix adjust.
 Identities = 41/139 (29%), Positives = 65/139 (46%), Gaps = 12/139 (8%)

Query: 344  VYTWGKGYCGALG--HGDEID-KTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 400
            V+ WG      LG   G +I   +  E LS+L     VQV    +  F +   G VY  G
Sbjct: 2961 VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALN---VVQVAGGSKSLFAVTVEGKVYACG 3017

Query: 401  WMGFGSLGFPDRGVSD-KVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDN 457
                G LG    G+S   V  PR + +L ++ V +++  +G  H   +T  G++F +G+ 
Sbjct: 3018 EATNGRLGL---GISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEG 3074

Query: 458  ERAQLGHDTLRGCLEPTEI 476
            +  +LGH +   C +P  I
Sbjct: 3075 DDGKLGHFSRMNCDKPRLI 3093


>gi|351699519|gb|EHB02438.1| Putative E3 ubiquitin-protein ligase HERC2 [Heterocephalus glaber]
          Length = 4833

 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 96/328 (29%), Positives = 157/328 (47%), Gaps = 16/328 (4%)

Query: 161  SAAHVVQVSASENHAAFVLQSGQVFTCGD--NSSFCCGHRDTNRPIFRPRLVEALKGVPC 218
            SA +VVQV+        V   G+V+ CG+  N     G      PI  PR + AL     
Sbjct: 2993 SALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGLSSGTVPI--PRQITALSSYVV 3050

Query: 219  KQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA 276
            K+V   +G      LT+ G V + G    G+LGH   ++   P+ I  L     +  IA 
Sbjct: 3051 KKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALR-AKRIRDIAC 3109

Query: 277  GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEH 334
            G S+  A+T +G +Y++G G    LGHG+   +L+P+ ++     G  V++V+ G  D  
Sbjct: 3110 GSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLL--GHRVIQVACGSRDAQ 3167

Query: 335  VVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 394
             +AL   G V++WG G  G LG G      +P+ +  L      Q+    + +  L  +G
Sbjct: 3168 TLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSG 3227

Query: 395  SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 454
             V+ +G   +  LG    G    V +P++++ LR   +  ++ G  H + VTD G+++ +
Sbjct: 3228 VVWTWGKGDYFRLG---HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAW 3284

Query: 455  GDNERAQLGHDTLRGCLEPTEIFIQEME 482
            GDN+  Q G+ T     +PT   +Q +E
Sbjct: 3285 GDNDHGQQGNGTTTVNRKPT--LVQGLE 3310



 Score =  127 bits (319), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 94/286 (32%), Positives = 140/286 (48%), Gaps = 10/286 (3%)

Query: 183  QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 242
            +VF  G N     G    ++ I  P   E L  +   QV  G      +T+ G V+ CG 
Sbjct: 2963 KVFVWGLNDKDQLGGLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGE 3021

Query: 243  NTHGQLGHG-DTLDRPTPKSIAPLEE-VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 300
             T+G+LG G  +   P P+ I  L   V   V + +G  +  A+T +G V+S+G G +  
Sbjct: 3022 ATNGRLGLGLSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGK 3081

Query: 301  LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 360
            LGH  + +  +PR I+  R K I    ++ G  H  AL SSG +YTWG G  G LGHGD 
Sbjct: 3082 LGHFSRMNCDKPRLIEALRAKRIR--DIACGSSHSAALTSSGELYTWGLGEYGRLGHGDN 3139

Query: 361  IDKTLPEPLSSLKSHLAVQVC--ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKV 418
              +  P+ +  L  H  +QV   +R  +T  L D G V+ +G   FG LG   RG S+  
Sbjct: 3140 TTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLG---RGGSEGC 3196

Query: 419  LRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 464
              P+ ++ L    V QI  G   ++ +T  G ++ +G  +  +LGH
Sbjct: 3197 NIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGH 3242



 Score =  122 bits (306), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 86/280 (30%), Positives = 139/280 (49%), Gaps = 9/280 (3%)

Query: 166  VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 225
            V V++   H   +   G+V++ G+      GH  +  P  RPR+VE+L+G+    V AG 
Sbjct: 4046 VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGH-GSRSPCDRPRVVESLRGIEVVDVAAGG 4104

Query: 226  NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA--AGPSYMLA 283
              +  +T  G ++T G   +G+LGH D+ D+  PK +  L+    VV +A  +G +  L 
Sbjct: 4105 AHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEVLQG-HRVVDVACGSGDAQTLC 4163

Query: 284  VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 343
            +T +  V+S+G G    LG G       P  I++    G+ VV+V  G +  VAL  SG 
Sbjct: 4164 LTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIESL--TGLGVVKVECGSQFSVALTKSGA 4221

Query: 344  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 403
            VYTWGKG    LGHG +     P  +  L+    + +           + G VY +G   
Sbjct: 4222 VYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDND 4281

Query: 404  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV 443
             G LG    G ++ + RPR++ +L+   V++++ G  HT+
Sbjct: 4282 EGQLG---DGTTNAIQRPRLVAALQGKKVNRVACGSAHTL 4318



 Score =  119 bits (298), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 81/269 (30%), Positives = 130/269 (48%), Gaps = 6/269 (2%)

Query: 207  PRLVEALKGVPCKQV--TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP 264
            P L+E+++ V  ++V   +G      L+  G V++ G    G+LGHG       P+ +  
Sbjct: 4032 PTLLESIQHVFIRKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGSRSPCDRPRVVES 4091

Query: 265  LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH 324
            L  +  VV +AAG ++   VT  G +Y++G G    LGH +  D+L+P+ ++  +   + 
Sbjct: 4092 LRGI-EVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEVLQGHRVV 4150

Query: 325  VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARK 384
             V   +GD   + L     V++WG G  G LG G      +P  + SL     V+V    
Sbjct: 4151 DVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIESLTGLGVVKVECGS 4210

Query: 385  RKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV 444
            + +  L  +G+VY +G   +  LG    G  D V RPR +  L+   V  I+TG  H V 
Sbjct: 4211 QFSVALTKSGAVYTWGKGDYHRLG---HGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 4267

Query: 445  VTDRGRLFGFGDNERAQLGHDTLRGCLEP 473
             T+ G ++ +GDN+  QLG  T      P
Sbjct: 4268 CTEDGEVYTWGDNDEGQLGDGTTNAIQRP 4296



 Score =  115 bits (288), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 93/311 (29%), Positives = 149/311 (47%), Gaps = 24/311 (7%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V Q++ +E     + ++G+V+T   NS       DT      P+LV+ L      ++ A 
Sbjct: 454 VTQIACAEKRFLILSRNGRVYTQAYNS-------DT----LAPQLVQGLASRNIVKIAAH 502

Query: 225 LNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGS-VVQIAAGPS 279
            +   +L +   G V + G    G+LGHGDT+    PK I+    ++ G  VV IA G +
Sbjct: 503 SDGHHYLALAATGEVFSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQGGKHVVHIACGST 562

Query: 280 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS--AGDEHVVA 337
           Y  A+T  G +Y++G G+   LGHG   DE  P  +     KG+ V+ V+  +GD   +A
Sbjct: 563 YSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGL--KGLKVIDVACGSGDAQTLA 620

Query: 338 LDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVY 397
           +  +G V++WG G  G LG G       P+ +  L+    V+V    + +  L   G VY
Sbjct: 621 VTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLEVVKVRCGSQFSVALTKDGQVY 680

Query: 398 GFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDN 457
            +G      LG    G  + V  PR+L+ L    V  ++ G  H + +T+   +  +G N
Sbjct: 681 SWGKGDNQRLG---HGTEEHVRYPRLLEGLHGKKVIDVAAGSTHCLALTEDSEVHSWGSN 737

Query: 458 ERAQLGHDTLR 468
           ++ Q   DTLR
Sbjct: 738 DQCQ-HFDTLR 747



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 80/242 (33%), Positives = 115/242 (47%), Gaps = 7/242 (2%)

Query: 119  GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
            GR+ T L  +  VFS G    G LGH      C     I    A  +  ++   +H+A +
Sbjct: 3059 GRHATALTVDGKVFSWGEGDDGKLGHF-SRMNCDKPRLIEALRAKRIRDIACGSSHSAAL 3117

Query: 179  LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN--FTGFLTIRGH 236
              SG+++T G       GH D N    +P++V+ L G    QV  G     T  LT  G 
Sbjct: 3118 TSSGELYTWGLGEYGRLGHGD-NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 3176

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 296
            V + G    G+LG G +     P++I  L   G V QI  G  + LA+T +GVV+++G G
Sbjct: 3177 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTWGKG 3235

Query: 297  SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 356
              F LGHG      +P+ ++  R  G  +V V+ G  H +A+  SG VY WG    G  G
Sbjct: 3236 DYFRLGHGSDVHVRKPQVVEGLR--GKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQG 3293

Query: 357  HG 358
            +G
Sbjct: 3294 NG 3295



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 79/249 (31%), Positives = 118/249 (47%), Gaps = 8/249 (3%)

Query: 113  NMQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSAS 171
             + + +G  H L +S+   V+S G +  G LGHG  +  C     +       VV V+A 
Sbjct: 4045 KVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGSRSP-CDRPRVVESLRGIEVVDVAAG 4103

Query: 172  ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT--AGLNFTG 229
              H+A V  +G ++T G       GH D+   + +P+LVE L+G     V   +G   T 
Sbjct: 4104 GAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQL-KPKLVEVLQGHRVVDVACGSGDAQTL 4162

Query: 230  FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 289
             LT    V + G   +G+LG G +     P  I  L  +G VV++  G  + +A+T +G 
Sbjct: 4163 CLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIESLTGLG-VVKVECGSQFSVALTKSGA 4221

Query: 290  VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 349
            VY++G G    LGHG      +PR +Q    +G  V+ ++ G  H V     G VYTWG 
Sbjct: 4222 VYTWGKGDYHRLGHGSDDHVRRPRQVQGL--QGKKVIAIATGSLHCVCCTEDGEVYTWGD 4279

Query: 350  GYCGALGHG 358
               G LG G
Sbjct: 4280 NDEGQLGDG 4288



 Score = 99.0 bits (245), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 76/247 (30%), Positives = 123/247 (49%), Gaps = 12/247 (4%)

Query: 235  GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
            G ++  G N  GQLG   G  +  PTP +++A L  V    Q+  G   + AVT +G +Y
Sbjct: 3956 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPV----QLIGGEQTLFAVTADGKLY 4011

Query: 292  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 351
            + G G+   LG G       P  +++ +   I  V V++G +H +AL S G VY+WG+  
Sbjct: 4012 ATGYGAGGRLGIGGTESVSAPTLLESIQHVFIRKVAVNSGGKHCLALSSEGEVYSWGEAE 4071

Query: 352  CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 411
             G LGHG       P  + SL+    V V A    +  +   G +Y +G   +G LG  D
Sbjct: 4072 DGKLGHGSRSPCDRPRVVESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD 4131

Query: 412  RGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG 469
               S+  L+P++++ L+ H V  ++  +G   T+ +TD   ++ +GD +  +LG     G
Sbjct: 4132 ---SEDQLKPKLVEVLQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDG 4188

Query: 470  CLEPTEI 476
            C  P +I
Sbjct: 4189 CKVPMKI 4195



 Score = 98.6 bits (244), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 90/328 (27%), Positives = 147/328 (44%), Gaps = 26/328 (7%)

Query: 50  PQKFRSLVDLAASQLCALHSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVET 109
           P +   L +L  +Q+      +  +SRN ++    +   +     + +Q +  S +IV+ 
Sbjct: 443 PIQCEGLANLGVTQIACAEKRFLILSRNGRV--YTQAYNSDTLAPQLVQGLA-SRNIVKI 499

Query: 110 SAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSA 162
           +A     + G ++  L +   VFS G    G LGHG       P+     S  +      
Sbjct: 500 AAH----SDGHHYLALAATGEVFSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQ----GG 551

Query: 163 AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 222
            HVV ++    ++A +   G+++T G  +    GH  +      P LV  LKG+    V 
Sbjct: 552 KHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVA 610

Query: 223 AGLNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 280
            G      L +   G V + G   +G+LG G +    TPK I  L+++  VV++  G  +
Sbjct: 611 CGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL-EVVKVRCGSQF 669

Query: 281 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 340
            +A+T +G VYS+G G N  LGHG +     PR ++     G  V+ V+AG  H +AL  
Sbjct: 670 SVALTKDGQVYSWGKGDNQRLGHGTEEHVRYPRLLEGLH--GKKVIDVAAGSTHCLALTE 727

Query: 341 SGYVYTWGKGYCGALGHGDEIDKTLPEP 368
              V++WG        H D +  T PEP
Sbjct: 728 DSEVHSWGSN--DQCQHFDTLRVTKPEP 753



 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 59/220 (26%), Positives = 100/220 (45%), Gaps = 22/220 (10%)

Query: 271 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 330
           V QIA      L ++ NG VY+    S          D L P+ +Q    + I  +   +
Sbjct: 454 VTQIACAEKRFLILSRNGRVYTQAYNS----------DTLAPQLVQGLASRNIVKIAAHS 503

Query: 331 GDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK-----SHLAVQVCARKR 385
              H +AL ++G V++WG G  G LGHGD +    P+ +S+        H+    C    
Sbjct: 504 DGHHYLALAATGEVFSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQGGKHVVHIACGSTY 563

Query: 386 KTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTV 443
              +  + G +Y +G   +G LG    G S+    P ++  L+   V  ++  +G   T+
Sbjct: 564 SAAITAE-GELYTWGRGNYGRLG---HGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTL 619

Query: 444 VVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI-FIQEME 482
            VT+ G+++ +GD +  +LG     GC  P  I  +Q++E
Sbjct: 620 AVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLE 659



 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 66/225 (29%), Positives = 100/225 (44%), Gaps = 8/225 (3%)

Query: 116  ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
            I  G  H+  L S+  +++ G    G LGHG  TTQ +    +       V+QV+     
Sbjct: 3107 IACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQ-LKPKMVKVLLGHRVIQVACGSRD 3165

Query: 175  AA--FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            A    +   G VF+ GD      G R  +     P+ +E L G    Q+  G  F+  LT
Sbjct: 3166 AQTLALTDEGLVFSWGDGDFGKLG-RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALT 3224

Query: 233  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
              G V T G   + +LGHG  +    P+ +  L     +V +A G  + LAVT +G VY+
Sbjct: 3225 KSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRG-KKIVHVAVGALHCLAVTDSGQVYA 3283

Query: 293  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
            +G   +   G+G      +P  +Q    +G  + RV+ G  H VA
Sbjct: 3284 WGDNDHGQQGNGTTTVNRKPTLVQGL--EGQKITRVACGSSHSVA 3326



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 53/169 (31%), Positives = 75/169 (44%), Gaps = 8/169 (4%)

Query: 118 TGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
           +G   TL ++ N  V+S G    G LG G  +  C +   I       VV+V      + 
Sbjct: 613 SGDAQTLAVTENGQVWSWGDGDYGKLGRG-GSDGCKTPKLIEKLQDLEVVKVRCGSQFSV 671

Query: 177 FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
            + + GQV++ G   +   GH  T   +  PRL+E L G     V AG      LT    
Sbjct: 672 ALTKDGQVYSWGKGDNQRLGH-GTEEHVRYPRLLEGLHGKKVIDVAAGSTHCLALTEDSE 730

Query: 237 VHTCGSNTHGQLGHGDTL--DRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
           VH+ GSN   Q  H DTL   +P P ++  L +   +V IA GP+   A
Sbjct: 731 VHSWGSNDQCQ--HFDTLRVTKPEPAALPGL-DTKHIVGIACGPAQSFA 776



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 50/167 (29%), Positives = 75/167 (44%), Gaps = 4/167 (2%)

Query: 118  TGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
            +G   TL L  + +V+S G    G LG G  +  C    +I   +   VV+V      + 
Sbjct: 4156 SGDAQTLCLTDDDTVWSWGDGDYGKLGRG-GSDGCKVPMKIESLTGLGVVKVECGSQFSV 4214

Query: 177  FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
             + +SG V+T G       GH   +  + RPR V+ L+G     +  G       T  G 
Sbjct: 4215 ALTKSGAVYTWGKGDYHRLGHGSDDH-VRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGE 4273

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
            V+T G N  GQLG G T     P+ +A L+    V ++A G ++ LA
Sbjct: 4274 VYTWGDNDEGQLGDGTTNAIQRPRLVAALQG-KKVNRVACGSAHTLA 4319



 Score = 52.0 bits (123), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 35/144 (24%), Positives = 71/144 (49%), Gaps = 5/144 (3%)

Query: 332  DEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 391
            D+  ++   SG +Y WG  + G LG  +     +P P  +L +   VQ+   ++  F + 
Sbjct: 3946 DDWTLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVT 4005

Query: 392  DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRG 449
              G +Y     G+G+ G    G ++ V  P +L+S++   + +++  +G  H + ++  G
Sbjct: 4006 ADGKLYA---TGYGAGGRLGIGGTESVSAPTLLESIQHVFIRKVAVNSGGKHCLALSSEG 4062

Query: 450  RLFGFGDNERAQLGHDTLRGCLEP 473
             ++ +G+ E  +LGH +   C  P
Sbjct: 4063 EVYSWGEAEDGKLGHGSRSPCDRP 4086



 Score = 46.2 bits (108), Expect = 0.034,   Method: Compositional matrix adjust.
 Identities = 47/161 (29%), Positives = 75/161 (46%), Gaps = 14/161 (8%)

Query: 322  GIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG--HGDEID-KTLPEPLSSLKSHLAV 378
            G  + + SAG E   A+ +   V+ WG      LG   G +I   +  E LS+L     V
Sbjct: 2944 GSLIRKKSAGLESSAAVRTK--VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALN---VV 2998

Query: 379  QVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSD-KVLRPRILDSLRAHHVSQIS- 436
            QV    +  F +   G VY  G    G LG    G+S   V  PR + +L ++ V +++ 
Sbjct: 2999 QVAGGSKSLFAVTVEGKVYACGEATNGRLGL---GLSSGTVPIPRQITALSSYVVKKVAV 3055

Query: 437  -TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 476
             +G  H   +T  G++F +G+ +  +LGH +   C +P  I
Sbjct: 3056 HSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLI 3096


>gi|329663335|ref|NP_001193010.1| E3 ubiquitin-protein ligase HERC2 [Bos taurus]
 gi|296490789|tpg|DAA32902.1| TPA: hect domain and RLD 3-like [Bos taurus]
          Length = 4837

 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 96/328 (29%), Positives = 158/328 (48%), Gaps = 16/328 (4%)

Query: 161  SAAHVVQVSASENHAAFVLQSGQVFTCGD--NSSFCCGHRDTNRPIFRPRLVEALKGVPC 218
            SA +VVQV+        V   G+V+ CG+  N     G      PI  PR + AL     
Sbjct: 2991 SALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPI--PRQITALSSYVV 3048

Query: 219  KQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA 276
            K+V   +G      LT+ G V + G    G+LGH   ++   P+ I  L+    +  IA 
Sbjct: 3049 KKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALK-TKRIRDIAC 3107

Query: 277  GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEH 334
            G S+  A+T +G +Y++G G    LGHG+   +L+P+ ++     G  V++V+ G  D  
Sbjct: 3108 GSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLL--GHRVIQVACGSRDAQ 3165

Query: 335  VVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 394
             +AL   G V++WG G  G LG G      +P+ +  L      Q+    + +  L  +G
Sbjct: 3166 TLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSG 3225

Query: 395  SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 454
             V+ +G   +  LG    G    V +P++++ LR   +  ++ G  H + VTD G+++ +
Sbjct: 3226 VVWTWGKGDYFRLG---HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAW 3282

Query: 455  GDNERAQLGHDTLRGCLEPTEIFIQEME 482
            GDN+  Q G+ T     +PT   +Q +E
Sbjct: 3283 GDNDHGQQGNGTTTVNRKPT--LVQGLE 3308



 Score =  125 bits (315), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 93/286 (32%), Positives = 140/286 (48%), Gaps = 10/286 (3%)

Query: 183  QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 242
            +VF  G N     G    ++ I  P   E L  +   QV  G      +T+ G V+ CG 
Sbjct: 2961 KVFVWGLNDKDQLGGLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGE 3019

Query: 243  NTHGQLGHG-DTLDRPTPKSIAPLEE-VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 300
             T+G+LG G  +   P P+ I  L   V   V + +G  +  A+T +G V+S+G G +  
Sbjct: 3020 ATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGK 3079

Query: 301  LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 360
            LGH  + +  +PR I+  + K I    ++ G  H  AL SSG +YTWG G  G LGHGD 
Sbjct: 3080 LGHFSRMNCDKPRLIEALKTKRIR--DIACGSSHSAALTSSGELYTWGLGEYGRLGHGDN 3137

Query: 361  IDKTLPEPLSSLKSHLAVQVC--ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKV 418
              +  P+ +  L  H  +QV   +R  +T  L D G V+ +G   FG LG   RG S+  
Sbjct: 3138 TTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLG---RGGSEGC 3194

Query: 419  LRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 464
              P+ ++ L    V QI  G   ++ +T  G ++ +G  +  +LGH
Sbjct: 3195 NIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGH 3240



 Score =  119 bits (299), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 85/280 (30%), Positives = 138/280 (49%), Gaps = 9/280 (3%)

Query: 166  VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 225
            V V++   H   +   G+V++ G+      GH + + P  RPR++E+L+G     V AG 
Sbjct: 4045 VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRS-PCDRPRVIESLRGTEVVDVAAGG 4103

Query: 226  NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA--AGPSYMLA 283
              +  +T  G ++T G   +G+LGH D+ D+  PK +  L+    VV +A  +G +  L 
Sbjct: 4104 AHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQG-HRVVDVACGSGDAQTLC 4162

Query: 284  VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 343
            +T +  V+S+G G    LG G       P  I +    G+ VV+V  G +  VAL  SG 
Sbjct: 4163 LTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL--TGLGVVKVECGSQFSVALTKSGA 4220

Query: 344  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 403
            VYTWGKG    LGHG +     P  +  L+    + +           + G VY +G   
Sbjct: 4221 VYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCSEDGEVYTWGDND 4280

Query: 404  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV 443
             G LG    G ++ + RPR++ +L+   V++++ G  HT+
Sbjct: 4281 EGQLG---DGTTNAIQRPRLVAALQGKKVNRVACGSAHTL 4317



 Score =  119 bits (299), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 91/315 (28%), Positives = 146/315 (46%), Gaps = 7/315 (2%)

Query: 161  SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQ 220
            +A   VQ+   E     V   G+++  G  +    G   T   +  P L+E+++ V  K+
Sbjct: 3986 AALRPVQLIGGEQTLFAVTADGKLYATGYGAGGRLGVGGTES-VSTPTLLESIQHVFIKK 4044

Query: 221  V--TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGP 278
            V   +G      L+  G V++ G    G+LGHG+      P+ I  L     VV +AAG 
Sbjct: 4045 VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGT-EVVDVAAGG 4103

Query: 279  SYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
            ++   VT  G +Y++G G    LGH +  D+L+P+ ++  +   +  V   +GD   + L
Sbjct: 4104 AHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLCL 4163

Query: 339  DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYG 398
                 V++WG G  G LG G      +P  + SL     V+V    + +  L  +G+VY 
Sbjct: 4164 TDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYT 4223

Query: 399  FGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNE 458
            +G   +  LG    G  D V RPR +  L+   V  I+TG  H V  ++ G ++ +GDN+
Sbjct: 4224 WGKGDYHRLG---HGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCSEDGEVYTWGDND 4280

Query: 459  RAQLGHDTLRGCLEP 473
              QLG  T      P
Sbjct: 4281 EGQLGDGTTNAIQRP 4295



 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 92/311 (29%), Positives = 151/311 (48%), Gaps = 24/311 (7%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V Q++ +E     + ++G+V+T   NS       DT      P+LV+ L      ++ A 
Sbjct: 454 VTQIACAEKRFLILSRNGRVYTQAYNS-------DT----LAPQLVQGLASRNIVKIAAH 502

Query: 225 LNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGS-VVQIAAGPS 279
            +   +L +   G V++ G    G+LGHGDT+    PK I+    ++ G  VV IA G +
Sbjct: 503 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGST 562

Query: 280 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS--AGDEHVVA 337
           Y  A+T  G +Y++G G+   LGHG   DE  P  +     KG+ V+ V+  +GD   +A
Sbjct: 563 YSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGL--KGLKVIDVACGSGDAQTLA 620

Query: 338 LDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVY 397
           +  +G V++WG G  G LG G       P+ +  L+    V+V    + +  L   G VY
Sbjct: 621 VTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSVALTKDGQVY 680

Query: 398 GFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDN 457
            +G      LG    G  + V  P++L+ L+   V  ++ G  H + +T+   +  +G N
Sbjct: 681 SWGKGDNQRLG---HGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSN 737

Query: 458 ERAQLGHDTLR 468
           ++ Q   DTLR
Sbjct: 738 DQCQ-HFDTLR 747



 Score =  103 bits (256), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 85/265 (32%), Positives = 126/265 (47%), Gaps = 12/265 (4%)

Query: 96   FLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFT 155
             L+S++H    ++  A N   + G++   L S   V+S G +  G LGHG   + C    
Sbjct: 4033 LLESIQHV--FIKKVAVN---SGGKHCLALSSEGEVYSWGEAEDGKLGHG-NRSPCDRPR 4086

Query: 156  RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 215
             I       VV V+A   H+A V  +G ++T G       GH D+   + +P+LVEAL+G
Sbjct: 4087 VIESLRGTEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQL-KPKLVEALQG 4145

Query: 216  VPCKQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
                 V   +G   T  LT    V + G   +G+LG G +     P  I  L  +G VV+
Sbjct: 4146 HRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLG-VVK 4204

Query: 274  IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
            +  G  + +A+T +G VY++G G    LGHG      +PR +Q    +G  V+ ++ G  
Sbjct: 4205 VECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGL--QGKKVIAIATGSL 4262

Query: 334  HVVALDSSGYVYTWGKGYCGALGHG 358
            H V     G VYTWG    G LG G
Sbjct: 4263 HCVCCSEDGEVYTWGDNDEGQLGDG 4287



 Score =  101 bits (252), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 76/247 (30%), Positives = 125/247 (50%), Gaps = 12/247 (4%)

Query: 235  GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
            G ++  G N  GQLG   G  +  PTP +++A L  V    Q+  G   + AVT +G +Y
Sbjct: 3955 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALAALRPV----QLIGGEQTLFAVTADGKLY 4010

Query: 292  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 351
            + G G+   LG G       P  +++ +   I  V V++G +H +AL S G VY+WG+  
Sbjct: 4011 ATGYGAGGRLGVGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAE 4070

Query: 352  CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 411
             G LGHG+      P  + SL+    V V A    +  +   G +Y +G   +G LG  D
Sbjct: 4071 DGKLGHGNRSPCDRPRVIESLRGTEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD 4130

Query: 412  RGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG 469
               S+  L+P+++++L+ H V  ++  +G   T+ +TD   ++ +GD +  +LG     G
Sbjct: 4131 ---SEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDG 4187

Query: 470  CLEPTEI 476
            C  P +I
Sbjct: 4188 CKVPMKI 4194



 Score = 98.6 bits (244), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 78/242 (32%), Positives = 114/242 (47%), Gaps = 7/242 (2%)

Query: 119  GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
            GR+ T L  +  VFS G    G LGH      C     I       +  ++   +H+A +
Sbjct: 3057 GRHATALTVDGKVFSWGEGDDGKLGHF-SRMNCDKPRLIEALKTKRIRDIACGSSHSAAL 3115

Query: 179  LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN--FTGFLTIRGH 236
              SG+++T G       GH D N    +P++V+ L G    QV  G     T  LT  G 
Sbjct: 3116 TSSGELYTWGLGEYGRLGHGD-NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 3174

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 296
            V + G    G+LG G +     P++I  L   G V QI  G  + LA+T +GVV+++G G
Sbjct: 3175 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTWGKG 3233

Query: 297  SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 356
              F LGHG      +P+ ++  R  G  +V V+ G  H +A+  +G VY WG    G  G
Sbjct: 3234 DYFRLGHGSDVHVRKPQVVEGLR--GKKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQG 3291

Query: 357  HG 358
            +G
Sbjct: 3292 NG 3293



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 88/328 (26%), Positives = 149/328 (45%), Gaps = 26/328 (7%)

Query: 50  PQKFRSLVDLAASQLCALHSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVET 109
           P +   L +L  +Q+      +  +SRN ++    +   +     + +Q +  S +IV+ 
Sbjct: 443 PIQCEGLANLGVTQIACAEKRFLILSRNGRV--YTQAYNSDTLAPQLVQGLA-SRNIVKI 499

Query: 110 SAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSA 162
           +A     + G ++  L +   V+S G    G LGHG       P+     S  +    + 
Sbjct: 500 AAH----SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQ----AG 551

Query: 163 AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 222
            HVV ++    ++A +   G+++T G  +    GH  +      P LV  LKG+    V 
Sbjct: 552 KHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVA 610

Query: 223 AGLNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 280
            G      L +   G V + G   +G+LG G +    TPK I  L+++  VV++  G  +
Sbjct: 611 CGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL-DVVKVRCGSQF 669

Query: 281 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 340
            +A+T +G VYS+G G N  LGHG +     P+ ++    +G  V+ V+AG  H +AL  
Sbjct: 670 SVALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGL--QGKKVIDVAAGSTHCLALTE 727

Query: 341 SGYVYTWGKGYCGALGHGDEIDKTLPEP 368
              V++WG        H D +  T PEP
Sbjct: 728 DSEVHSWGSN--DQCQHFDTLRVTKPEP 753



 Score = 76.6 bits (187), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 58/219 (26%), Positives = 100/219 (45%), Gaps = 21/219 (9%)

Query: 271 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 330
           V QIA      L ++ NG VY+    S          D L P+ +Q    + I  +   +
Sbjct: 454 VTQIACAEKRFLILSRNGRVYTQAYNS----------DTLAPQLVQGLASRNIVKIAAHS 503

Query: 331 GDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLA----VQVCARKRK 386
              H +AL ++G VY+WG G  G LGHGD +    P+ +S+     A    V +      
Sbjct: 504 DGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTY 563

Query: 387 TFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVV 444
           +  +   G +Y +G   +G LG    G S+    P ++  L+   V  ++  +G   T+ 
Sbjct: 564 SAAITAEGELYTWGRGNYGRLG---HGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLA 620

Query: 445 VTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQEMEE 483
           VT+ G+++ +GD +  +LG     GC  P    I+++++
Sbjct: 621 VTENGQVWSWGDGDYGKLGRGGSDGCKTPK--LIEKLQD 657



 Score = 66.2 bits (160), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 66/225 (29%), Positives = 99/225 (44%), Gaps = 8/225 (3%)

Query: 116  ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
            I  G  H+  L S+  +++ G    G LGHG  TTQ +    +       V+QV+     
Sbjct: 3105 IACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQ-LKPKMVKVLLGHRVIQVACGSRD 3163

Query: 175  AA--FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            A    +   G VF+ GD      G R  +     P+ +E L G    Q+  G  F+  LT
Sbjct: 3164 AQTLALTDEGLVFSWGDGDFGKLG-RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALT 3222

Query: 233  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
              G V T G   + +LGHG  +    P+ +  L     +V +A G  + LAVT  G VY+
Sbjct: 3223 KSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRG-KKIVHVAVGALHCLAVTDAGQVYA 3281

Query: 293  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
            +G   +   G+G      +P  +Q    +G  + RV+ G  H VA
Sbjct: 3282 WGDNDHGQQGNGTTTVNRKPTLVQGL--EGQKITRVACGSSHSVA 3324



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 52/169 (30%), Positives = 76/169 (44%), Gaps = 8/169 (4%)

Query: 118 TGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
           +G   TL ++ N  V+S G    G LG G  +  C +   I       VV+V      + 
Sbjct: 613 SGDAQTLAVTENGQVWSWGDGDYGKLGRG-GSDGCKTPKLIEKLQDLDVVKVRCGSQFSV 671

Query: 177 FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
            + + GQV++ G   +   GH  T   +  P+L+E L+G     V AG      LT    
Sbjct: 672 ALTKDGQVYSWGKGDNQRLGH-GTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSE 730

Query: 237 VHTCGSNTHGQLGHGDTL--DRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
           VH+ GSN   Q  H DTL   +P P ++  L +   +V IA GP+   A
Sbjct: 731 VHSWGSNDQCQ--HFDTLRVTKPEPSALPGL-DTKHIVGIACGPAQSFA 776



 Score = 53.1 bits (126), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 49/167 (29%), Positives = 76/167 (45%), Gaps = 4/167 (2%)

Query: 118  TGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
            +G   TL L  + +V+S G    G LG G  +  C    +I+  +   VV+V      + 
Sbjct: 4155 SGDAQTLCLTDDDTVWSWGDGDYGKLGRG-GSDGCKVPMKIDSLTGLGVVKVECGSQFSV 4213

Query: 177  FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
             + +SG V+T G       GH   +  + RPR V+ L+G     +  G       +  G 
Sbjct: 4214 ALTKSGAVYTWGKGDYHRLGHGSDDH-VRRPRQVQGLQGKKVIAIATGSLHCVCCSEDGE 4272

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
            V+T G N  GQLG G T     P+ +A L+    V ++A G ++ LA
Sbjct: 4273 VYTWGDNDEGQLGDGTTNAIQRPRLVAALQG-KKVNRVACGSAHTLA 4318



 Score = 52.4 bits (124), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 36/147 (24%), Positives = 71/147 (48%), Gaps = 5/147 (3%)

Query: 332  DEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 391
            D+  ++   SG +Y WG  + G LG  +     +P P  +L +   VQ+   ++  F + 
Sbjct: 3945 DDWTLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALAALRPVQLIGGEQTLFAVT 4004

Query: 392  DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRG 449
              G +Y     G+G+ G    G ++ V  P +L+S++   + +++  +G  H + ++  G
Sbjct: 4005 ADGKLYA---TGYGAGGRLGVGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 4061

Query: 450  RLFGFGDNERAQLGHDTLRGCLEPTEI 476
             ++ +G+ E  +LGH     C  P  I
Sbjct: 4062 EVYSWGEAEDGKLGHGNRSPCDRPRVI 4088



 Score = 45.4 bits (106), Expect = 0.064,   Method: Compositional matrix adjust.
 Identities = 41/139 (29%), Positives = 65/139 (46%), Gaps = 12/139 (8%)

Query: 344  VYTWGKGYCGALG--HGDEID-KTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 400
            V+ WG      LG   G +I   +  E LS+L     VQV    +  F +   G VY  G
Sbjct: 2962 VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALN---VVQVAGGSKSLFAVTVEGKVYACG 3018

Query: 401  WMGFGSLGFPDRGVSD-KVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDN 457
                G LG    G+S   V  PR + +L ++ V +++  +G  H   +T  G++F +G+ 
Sbjct: 3019 EATNGRLGL---GISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEG 3075

Query: 458  ERAQLGHDTLRGCLEPTEI 476
            +  +LGH +   C +P  I
Sbjct: 3076 DDGKLGHFSRMNCDKPRLI 3094


>gi|440911989|gb|ELR61602.1| E3 ubiquitin-protein ligase HERC2 [Bos grunniens mutus]
          Length = 4835

 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 96/328 (29%), Positives = 158/328 (48%), Gaps = 16/328 (4%)

Query: 161  SAAHVVQVSASENHAAFVLQSGQVFTCGD--NSSFCCGHRDTNRPIFRPRLVEALKGVPC 218
            SA +VVQV+        V   G+V+ CG+  N     G      PI  PR + AL     
Sbjct: 2989 SALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPI--PRQITALSSYVV 3046

Query: 219  KQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA 276
            K+V   +G      LT+ G V + G    G+LGH   ++   P+ I  L+    +  IA 
Sbjct: 3047 KKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALK-TKRIRDIAC 3105

Query: 277  GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEH 334
            G S+  A+T +G +Y++G G    LGHG+   +L+P+ ++     G  V++V+ G  D  
Sbjct: 3106 GSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLL--GHRVIQVACGSRDAQ 3163

Query: 335  VVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 394
             +AL   G V++WG G  G LG G      +P+ +  L      Q+    + +  L  +G
Sbjct: 3164 TLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSG 3223

Query: 395  SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 454
             V+ +G   +  LG    G    V +P++++ LR   +  ++ G  H + VTD G+++ +
Sbjct: 3224 VVWTWGKGDYFRLG---HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAW 3280

Query: 455  GDNERAQLGHDTLRGCLEPTEIFIQEME 482
            GDN+  Q G+ T     +PT   +Q +E
Sbjct: 3281 GDNDHGQQGNGTTTVNRKPT--LVQGLE 3306



 Score =  125 bits (315), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 93/286 (32%), Positives = 140/286 (48%), Gaps = 10/286 (3%)

Query: 183  QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 242
            +VF  G N     G    ++ I  P   E L  +   QV  G      +T+ G V+ CG 
Sbjct: 2959 KVFVWGLNDKDQLGGLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGE 3017

Query: 243  NTHGQLGHG-DTLDRPTPKSIAPLEE-VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 300
             T+G+LG G  +   P P+ I  L   V   V + +G  +  A+T +G V+S+G G +  
Sbjct: 3018 ATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGK 3077

Query: 301  LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 360
            LGH  + +  +PR I+  + K I    ++ G  H  AL SSG +YTWG G  G LGHGD 
Sbjct: 3078 LGHFSRMNCDKPRLIEALKTKRIR--DIACGSSHSAALTSSGELYTWGLGEYGRLGHGDN 3135

Query: 361  IDKTLPEPLSSLKSHLAVQVC--ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKV 418
              +  P+ +  L  H  +QV   +R  +T  L D G V+ +G   FG LG   RG S+  
Sbjct: 3136 TTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLG---RGGSEGC 3192

Query: 419  LRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 464
              P+ ++ L    V QI  G   ++ +T  G ++ +G  +  +LGH
Sbjct: 3193 NIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGH 3238



 Score =  119 bits (299), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 85/280 (30%), Positives = 138/280 (49%), Gaps = 9/280 (3%)

Query: 166  VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 225
            V V++   H   +   G+V++ G+      GH + + P  RPR++E+L+G     V AG 
Sbjct: 4043 VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRS-PCDRPRVIESLRGTEVVDVAAGG 4101

Query: 226  NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA--AGPSYMLA 283
              +  +T  G ++T G   +G+LGH D+ D+  PK +  L+    VV +A  +G +  L 
Sbjct: 4102 AHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQG-HRVVDVACGSGDAQTLC 4160

Query: 284  VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 343
            +T +  V+S+G G    LG G       P  I +    G+ VV+V  G +  VAL  SG 
Sbjct: 4161 LTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL--TGLGVVKVECGSQFSVALTKSGA 4218

Query: 344  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 403
            VYTWGKG    LGHG +     P  +  L+    + +           + G VY +G   
Sbjct: 4219 VYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCSEDGEVYTWGDND 4278

Query: 404  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV 443
             G LG    G ++ + RPR++ +L+   V++++ G  HT+
Sbjct: 4279 EGQLG---DGTTNAIQRPRLVAALQGKKVNRVACGSAHTL 4315



 Score =  119 bits (299), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 91/315 (28%), Positives = 146/315 (46%), Gaps = 7/315 (2%)

Query: 161  SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQ 220
            +A   VQ+   E     V   G+++  G  +    G   T   +  P L+E+++ V  K+
Sbjct: 3984 AALRPVQLIGGEQTLFAVTADGKLYATGYGAGGRLGVGGTES-VSTPTLLESIQHVFIKK 4042

Query: 221  V--TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGP 278
            V   +G      L+  G V++ G    G+LGHG+      P+ I  L     VV +AAG 
Sbjct: 4043 VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGT-EVVDVAAGG 4101

Query: 279  SYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
            ++   VT  G +Y++G G    LGH +  D+L+P+ ++  +   +  V   +GD   + L
Sbjct: 4102 AHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLCL 4161

Query: 339  DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYG 398
                 V++WG G  G LG G      +P  + SL     V+V    + +  L  +G+VY 
Sbjct: 4162 TDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYT 4221

Query: 399  FGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNE 458
            +G   +  LG    G  D V RPR +  L+   V  I+TG  H V  ++ G ++ +GDN+
Sbjct: 4222 WGKGDYHRLG---HGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCSEDGEVYTWGDND 4278

Query: 459  RAQLGHDTLRGCLEP 473
              QLG  T      P
Sbjct: 4279 EGQLGDGTTNAIQRP 4293



 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 92/311 (29%), Positives = 151/311 (48%), Gaps = 24/311 (7%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V Q++ +E     + ++G+V+T   NS       DT      P+LV+ L      ++ A 
Sbjct: 454 VTQIACAEKRFLILSRNGRVYTQAYNS-------DT----LAPQLVQGLASRNIVKIAAH 502

Query: 225 LNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGS-VVQIAAGPS 279
            +   +L +   G V++ G    G+LGHGDT+    PK I+    ++ G  VV IA G +
Sbjct: 503 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGST 562

Query: 280 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS--AGDEHVVA 337
           Y  A+T  G +Y++G G+   LGHG   DE  P  +     KG+ V+ V+  +GD   +A
Sbjct: 563 YSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGL--KGLKVIDVACGSGDAQTLA 620

Query: 338 LDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVY 397
           +  +G V++WG G  G LG G       P+ +  L+    V+V    + +  L   G VY
Sbjct: 621 VTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSVALTKDGQVY 680

Query: 398 GFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDN 457
            +G      LG    G  + V  P++L+ L+   V  ++ G  H + +T+   +  +G N
Sbjct: 681 SWGKGDNQRLG---HGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSN 737

Query: 458 ERAQLGHDTLR 468
           ++ Q   DTLR
Sbjct: 738 DQCQ-HFDTLR 747



 Score =  103 bits (256), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 85/265 (32%), Positives = 126/265 (47%), Gaps = 12/265 (4%)

Query: 96   FLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFT 155
             L+S++H    ++  A N   + G++   L S   V+S G +  G LGHG   + C    
Sbjct: 4031 LLESIQHV--FIKKVAVN---SGGKHCLALSSEGEVYSWGEAEDGKLGHG-NRSPCDRPR 4084

Query: 156  RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 215
             I       VV V+A   H+A V  +G ++T G       GH D+   + +P+LVEAL+G
Sbjct: 4085 VIESLRGTEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQL-KPKLVEALQG 4143

Query: 216  VPCKQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
                 V   +G   T  LT    V + G   +G+LG G +     P  I  L  +G VV+
Sbjct: 4144 HRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLG-VVK 4202

Query: 274  IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
            +  G  + +A+T +G VY++G G    LGHG      +PR +Q    +G  V+ ++ G  
Sbjct: 4203 VECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGL--QGKKVIAIATGSL 4260

Query: 334  HVVALDSSGYVYTWGKGYCGALGHG 358
            H V     G VYTWG    G LG G
Sbjct: 4261 HCVCCSEDGEVYTWGDNDEGQLGDG 4285



 Score =  101 bits (252), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 76/247 (30%), Positives = 125/247 (50%), Gaps = 12/247 (4%)

Query: 235  GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
            G ++  G N  GQLG   G  +  PTP +++A L  V    Q+  G   + AVT +G +Y
Sbjct: 3953 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALAALRPV----QLIGGEQTLFAVTADGKLY 4008

Query: 292  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 351
            + G G+   LG G       P  +++ +   I  V V++G +H +AL S G VY+WG+  
Sbjct: 4009 ATGYGAGGRLGVGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAE 4068

Query: 352  CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 411
             G LGHG+      P  + SL+    V V A    +  +   G +Y +G   +G LG  D
Sbjct: 4069 DGKLGHGNRSPCDRPRVIESLRGTEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD 4128

Query: 412  RGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG 469
               S+  L+P+++++L+ H V  ++  +G   T+ +TD   ++ +GD +  +LG     G
Sbjct: 4129 ---SEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDG 4185

Query: 470  CLEPTEI 476
            C  P +I
Sbjct: 4186 CKVPMKI 4192



 Score = 98.6 bits (244), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 78/242 (32%), Positives = 114/242 (47%), Gaps = 7/242 (2%)

Query: 119  GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
            GR+ T L  +  VFS G    G LGH      C     I       +  ++   +H+A +
Sbjct: 3055 GRHATALTVDGKVFSWGEGDDGKLGHF-SRMNCDKPRLIEALKTKRIRDIACGSSHSAAL 3113

Query: 179  LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN--FTGFLTIRGH 236
              SG+++T G       GH D N    +P++V+ L G    QV  G     T  LT  G 
Sbjct: 3114 TSSGELYTWGLGEYGRLGHGD-NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 3172

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 296
            V + G    G+LG G +     P++I  L   G V QI  G  + LA+T +GVV+++G G
Sbjct: 3173 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTWGKG 3231

Query: 297  SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 356
              F LGHG      +P+ ++  R  G  +V V+ G  H +A+  +G VY WG    G  G
Sbjct: 3232 DYFRLGHGSDVHVRKPQVVEGLR--GKKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQG 3289

Query: 357  HG 358
            +G
Sbjct: 3290 NG 3291



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 88/328 (26%), Positives = 149/328 (45%), Gaps = 26/328 (7%)

Query: 50  PQKFRSLVDLAASQLCALHSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVET 109
           P +   L +L  +Q+      +  +SRN ++    +   +     + +Q +  S +IV+ 
Sbjct: 443 PIQCEGLANLGVTQIACAEKRFLILSRNGRV--YTQAYNSDTLAPQLVQGLA-SRNIVKI 499

Query: 110 SAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSA 162
           +A     + G ++  L +   V+S G    G LGHG       P+     S  +    + 
Sbjct: 500 AAH----SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQ----AG 551

Query: 163 AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 222
            HVV ++    ++A +   G+++T G  +    GH  +      P LV  LKG+    V 
Sbjct: 552 KHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVA 610

Query: 223 AGLNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 280
            G      L +   G V + G   +G+LG G +    TPK I  L+++  VV++  G  +
Sbjct: 611 CGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL-DVVKVRCGSQF 669

Query: 281 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 340
            +A+T +G VYS+G G N  LGHG +     P+ ++    +G  V+ V+AG  H +AL  
Sbjct: 670 SVALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGL--QGKKVIDVAAGSTHCLALTE 727

Query: 341 SGYVYTWGKGYCGALGHGDEIDKTLPEP 368
              V++WG        H D +  T PEP
Sbjct: 728 DSEVHSWGSN--DQCQHFDTLRVTKPEP 753



 Score = 76.6 bits (187), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 58/219 (26%), Positives = 100/219 (45%), Gaps = 21/219 (9%)

Query: 271 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 330
           V QIA      L ++ NG VY+    S          D L P+ +Q    + I  +   +
Sbjct: 454 VTQIACAEKRFLILSRNGRVYTQAYNS----------DTLAPQLVQGLASRNIVKIAAHS 503

Query: 331 GDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLA----VQVCARKRK 386
              H +AL ++G VY+WG G  G LGHGD +    P+ +S+     A    V +      
Sbjct: 504 DGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTY 563

Query: 387 TFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVV 444
           +  +   G +Y +G   +G LG    G S+    P ++  L+   V  ++  +G   T+ 
Sbjct: 564 SAAITAEGELYTWGRGNYGRLG---HGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLA 620

Query: 445 VTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQEMEE 483
           VT+ G+++ +GD +  +LG     GC  P    I+++++
Sbjct: 621 VTENGQVWSWGDGDYGKLGRGGSDGCKTPK--LIEKLQD 657



 Score = 66.2 bits (160), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 66/225 (29%), Positives = 99/225 (44%), Gaps = 8/225 (3%)

Query: 116  ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
            I  G  H+  L S+  +++ G    G LGHG  TTQ +    +       V+QV+     
Sbjct: 3103 IACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQ-LKPKMVKVLLGHRVIQVACGSRD 3161

Query: 175  AA--FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            A    +   G VF+ GD      G R  +     P+ +E L G    Q+  G  F+  LT
Sbjct: 3162 AQTLALTDEGLVFSWGDGDFGKLG-RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALT 3220

Query: 233  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
              G V T G   + +LGHG  +    P+ +  L     +V +A G  + LAVT  G VY+
Sbjct: 3221 KSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRG-KKIVHVAVGALHCLAVTDAGQVYA 3279

Query: 293  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
            +G   +   G+G      +P  +Q    +G  + RV+ G  H VA
Sbjct: 3280 WGDNDHGQQGNGTTTVNRKPTLVQGL--EGQKITRVACGSSHSVA 3322



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 52/169 (30%), Positives = 76/169 (44%), Gaps = 8/169 (4%)

Query: 118 TGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
           +G   TL ++ N  V+S G    G LG G  +  C +   I       VV+V      + 
Sbjct: 613 SGDAQTLAVTENGQVWSWGDGDYGKLGRG-GSDGCKTPKLIEKLQDLDVVKVRCGSQFSV 671

Query: 177 FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
            + + GQV++ G   +   GH  T   +  P+L+E L+G     V AG      LT    
Sbjct: 672 ALTKDGQVYSWGKGDNQRLGH-GTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSE 730

Query: 237 VHTCGSNTHGQLGHGDTL--DRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
           VH+ GSN   Q  H DTL   +P P ++  L +   +V IA GP+   A
Sbjct: 731 VHSWGSNDQCQ--HFDTLRVTKPEPSALPGL-DTKHIVGIACGPAQSFA 776



 Score = 53.1 bits (126), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 49/167 (29%), Positives = 76/167 (45%), Gaps = 4/167 (2%)

Query: 118  TGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
            +G   TL L  + +V+S G    G LG G  +  C    +I+  +   VV+V      + 
Sbjct: 4153 SGDAQTLCLTDDDTVWSWGDGDYGKLGRG-GSDGCKVPMKIDSLTGLGVVKVECGSQFSV 4211

Query: 177  FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
             + +SG V+T G       GH   +  + RPR V+ L+G     +  G       +  G 
Sbjct: 4212 ALTKSGAVYTWGKGDYHRLGHGSDDH-VRRPRQVQGLQGKKVIAIATGSLHCVCCSEDGE 4270

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
            V+T G N  GQLG G T     P+ +A L+    V ++A G ++ LA
Sbjct: 4271 VYTWGDNDEGQLGDGTTNAIQRPRLVAALQG-KKVNRVACGSAHTLA 4316



 Score = 52.4 bits (124), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 36/147 (24%), Positives = 71/147 (48%), Gaps = 5/147 (3%)

Query: 332  DEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 391
            D+  ++   SG +Y WG  + G LG  +     +P P  +L +   VQ+   ++  F + 
Sbjct: 3943 DDWTLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALAALRPVQLIGGEQTLFAVT 4002

Query: 392  DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRG 449
              G +Y     G+G+ G    G ++ V  P +L+S++   + +++  +G  H + ++  G
Sbjct: 4003 ADGKLYA---TGYGAGGRLGVGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 4059

Query: 450  RLFGFGDNERAQLGHDTLRGCLEPTEI 476
             ++ +G+ E  +LGH     C  P  I
Sbjct: 4060 EVYSWGEAEDGKLGHGNRSPCDRPRVI 4086



 Score = 45.4 bits (106), Expect = 0.064,   Method: Compositional matrix adjust.
 Identities = 41/139 (29%), Positives = 65/139 (46%), Gaps = 12/139 (8%)

Query: 344  VYTWGKGYCGALG--HGDEID-KTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 400
            V+ WG      LG   G +I   +  E LS+L     VQV    +  F +   G VY  G
Sbjct: 2960 VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALN---VVQVAGGSKSLFAVTVEGKVYACG 3016

Query: 401  WMGFGSLGFPDRGVSD-KVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDN 457
                G LG    G+S   V  PR + +L ++ V +++  +G  H   +T  G++F +G+ 
Sbjct: 3017 EATNGRLGL---GISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEG 3073

Query: 458  ERAQLGHDTLRGCLEPTEI 476
            +  +LGH +   C +P  I
Sbjct: 3074 DDGKLGHFSRMNCDKPRLI 3092


>gi|410960762|ref|XP_003986956.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like isoform 1 [Felis
            catus]
          Length = 4837

 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 96/328 (29%), Positives = 158/328 (48%), Gaps = 16/328 (4%)

Query: 161  SAAHVVQVSASENHAAFVLQSGQVFTCGD--NSSFCCGHRDTNRPIFRPRLVEALKGVPC 218
            SA +VVQV+        V   G+V+ CG+  N     G      PI  PR + AL     
Sbjct: 2991 SALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPI--PRQITALSSYVV 3048

Query: 219  KQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA 276
            K+V   +G      LT+ G V + G    G+LGH   ++   P+ I  L+    +  IA 
Sbjct: 3049 KKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALK-TKRIRDIAC 3107

Query: 277  GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEH 334
            G S+  A+T +G +Y++G G    LGHG+   +L+P+ ++     G  V++V+ G  D  
Sbjct: 3108 GSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLL--GHRVIQVACGSRDAQ 3165

Query: 335  VVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 394
             +AL   G V++WG G  G LG G      +P+ +  L      Q+    + +  L  +G
Sbjct: 3166 TLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSG 3225

Query: 395  SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 454
             V+ +G   +  LG    G    V +P++++ LR   +  ++ G  H + VTD G+++ +
Sbjct: 3226 VVWTWGKGDYFRLG---HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAW 3282

Query: 455  GDNERAQLGHDTLRGCLEPTEIFIQEME 482
            GDN+  Q G+ T     +PT   +Q +E
Sbjct: 3283 GDNDHGQQGNGTTTVNRKPT--LVQGLE 3308



 Score =  125 bits (315), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 93/286 (32%), Positives = 140/286 (48%), Gaps = 10/286 (3%)

Query: 183  QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 242
            +VF  G N     G    ++ I  P   E L  +   QV  G      +T+ G V+ CG 
Sbjct: 2961 KVFVWGLNDKDQLGGLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGE 3019

Query: 243  NTHGQLGHG-DTLDRPTPKSIAPLEE-VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 300
             T+G+LG G  +   P P+ I  L   V   V + +G  +  A+T +G V+S+G G +  
Sbjct: 3020 ATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGK 3079

Query: 301  LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 360
            LGH  + +  +PR I+  + K I    ++ G  H  AL SSG +YTWG G  G LGHGD 
Sbjct: 3080 LGHFSRMNCDKPRLIEALKTKRIR--DIACGSSHSAALTSSGELYTWGLGEYGRLGHGDN 3137

Query: 361  IDKTLPEPLSSLKSHLAVQVC--ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKV 418
              +  P+ +  L  H  +QV   +R  +T  L D G V+ +G   FG LG   RG S+  
Sbjct: 3138 TTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLG---RGGSEGC 3194

Query: 419  LRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 464
              P+ ++ L    V QI  G   ++ +T  G ++ +G  +  +LGH
Sbjct: 3195 NIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGH 3240



 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 87/271 (32%), Positives = 135/271 (49%), Gaps = 10/271 (3%)

Query: 207  PRLVEALKGVPCKQV--TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP 264
            P L+E+++ V  K+V   +G      L+  G V++ G    G+LGHG+      P+ I  
Sbjct: 4031 PTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIES 4090

Query: 265  LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH 324
            L  +  VV +AAG ++   VT  G +Y++G G    LGH +  D+L+P+ ++    +G H
Sbjct: 4091 LRGI-EVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEAL--QGHH 4147

Query: 325  VVRVS--AGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCA 382
            VV V+  +GD   + L     V++WG G  G LG G      +P  + SL     V+V  
Sbjct: 4148 VVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVEC 4207

Query: 383  RKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHT 442
              + +  L  +G+VY +G   +  LG    G  D V RPR +  L+   V  I+TG  H 
Sbjct: 4208 GSQFSVALTKSGAVYTWGKGDYHRLG---HGSDDHVRRPRQVQGLQGKKVIAIATGSLHC 4264

Query: 443  VVVTDRGRLFGFGDNERAQLGHDTLRGCLEP 473
            V  T+ G ++ +GDN+  QLG  T      P
Sbjct: 4265 VCCTEDGEVYTWGDNDEGQLGDGTTNAIQRP 4295



 Score =  121 bits (303), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 85/280 (30%), Positives = 139/280 (49%), Gaps = 9/280 (3%)

Query: 166  VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 225
            V V++   H   +   G+V++ G+      GH + + P  RPR++E+L+G+    V AG 
Sbjct: 4045 VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRS-PCDRPRVIESLRGIEVVDVAAGG 4103

Query: 226  NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA--AGPSYMLA 283
              +  +T  G ++T G   +G+LGH D+ D+  PK +  L+    VV +A  +G +  L 
Sbjct: 4104 AHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQG-HHVVDVACGSGDAQTLC 4162

Query: 284  VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 343
            +T +  V+S+G G    LG G       P  I +    G+ VV+V  G +  VAL  SG 
Sbjct: 4163 LTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL--TGLGVVKVECGSQFSVALTKSGA 4220

Query: 344  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 403
            VYTWGKG    LGHG +     P  +  L+    + +           + G VY +G   
Sbjct: 4221 VYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDND 4280

Query: 404  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV 443
             G LG    G ++ + RPR++ +L+   V++++ G  HT+
Sbjct: 4281 EGQLG---DGTTNAIQRPRLVAALQGKKVNRVACGSAHTL 4317



 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 92/311 (29%), Positives = 151/311 (48%), Gaps = 24/311 (7%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V Q++ +E     + ++G+V+T   NS       DT      P+LV+ L      ++ A 
Sbjct: 454 VTQIACAEKRFLILSRNGRVYTQAYNS-------DT----LAPQLVQGLASRNIVKIAAH 502

Query: 225 LNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGS-VVQIAAGPS 279
            +   +L +   G V++ G    G+LGHGDT+    PK I+    ++ G  VV IA G +
Sbjct: 503 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGST 562

Query: 280 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS--AGDEHVVA 337
           Y  A+T  G +Y++G G+   LGHG   DE  P  +     KG+ V+ V+  +GD   +A
Sbjct: 563 YSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPVLVAGL--KGLKVIDVACGSGDAQTLA 620

Query: 338 LDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVY 397
           +  +G V++WG G  G LG G       P+ +  L+    V+V    + +  L   G VY
Sbjct: 621 VTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVY 680

Query: 398 GFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDN 457
            +G      LG    G  + V  P++L+ L+   V  ++ G  H + +T+   +  +G N
Sbjct: 681 SWGKGDNQRLG---HGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSN 737

Query: 458 ERAQLGHDTLR 468
           ++ Q   DTLR
Sbjct: 738 DQCQ-HFDTLR 747



 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 77/247 (31%), Positives = 126/247 (51%), Gaps = 12/247 (4%)

Query: 235  GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
            G ++  G N  GQLG   G  +  PTP +++A L  V    Q+  G   + AVT +G +Y
Sbjct: 3955 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPV----QLIGGEQTLFAVTADGKLY 4010

Query: 292  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 351
            + G G+   LG G       P  +++ +   I  V V++G +H +AL S G VY+WG+  
Sbjct: 4011 ATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAE 4070

Query: 352  CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 411
             G LGHG+      P  + SL+    V V A    +  +   G +Y +G   +G LG  D
Sbjct: 4071 DGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD 4130

Query: 412  RGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG 469
               S+  L+P+++++L+ HHV  ++  +G   T+ +TD   ++ +GD +  +LG     G
Sbjct: 4131 ---SEDQLKPKLVEALQGHHVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDG 4187

Query: 470  CLEPTEI 476
            C  P +I
Sbjct: 4188 CKVPMKI 4194



 Score =  102 bits (254), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 85/265 (32%), Positives = 126/265 (47%), Gaps = 12/265 (4%)

Query: 96   FLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFT 155
             L+S++H    ++  A N   + G++   L S   V+S G +  G LGHG   + C    
Sbjct: 4033 LLESIQHV--FIKKVAVN---SGGKHCLALSSEGEVYSWGEAEDGKLGHG-NRSPCDRPR 4086

Query: 156  RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 215
             I       VV V+A   H+A V  +G ++T G       GH D+   + +P+LVEAL+G
Sbjct: 4087 VIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQL-KPKLVEALQG 4145

Query: 216  VPCKQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
                 V   +G   T  LT    V + G   +G+LG G +     P  I  L  +G VV+
Sbjct: 4146 HHVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLG-VVK 4204

Query: 274  IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
            +  G  + +A+T +G VY++G G    LGHG      +PR +Q    +G  V+ ++ G  
Sbjct: 4205 VECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGL--QGKKVIAIATGSL 4262

Query: 334  HVVALDSSGYVYTWGKGYCGALGHG 358
            H V     G VYTWG    G LG G
Sbjct: 4263 HCVCCTEDGEVYTWGDNDEGQLGDG 4287



 Score = 99.0 bits (245), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 78/242 (32%), Positives = 114/242 (47%), Gaps = 7/242 (2%)

Query: 119  GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
            GR+ T L  +  VFS G    G LGH      C     I       +  ++   +H+A +
Sbjct: 3057 GRHATALTVDGKVFSWGEGDDGKLGHF-SRMNCDKPRLIEALKTKRIRDIACGSSHSAAL 3115

Query: 179  LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN--FTGFLTIRGH 236
              SG+++T G       GH D N    +P++V+ L G    QV  G     T  LT  G 
Sbjct: 3116 TSSGELYTWGLGEYGRLGHGD-NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 3174

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 296
            V + G    G+LG G +     P++I  L   G V QI  G  + LA+T +GVV+++G G
Sbjct: 3175 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTWGKG 3233

Query: 297  SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 356
              F LGHG      +P+ ++  R  G  +V V+ G  H +A+  +G VY WG    G  G
Sbjct: 3234 DYFRLGHGSDVHVRKPQVVEGLR--GKKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQG 3291

Query: 357  HG 358
            +G
Sbjct: 3292 NG 3293



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 88/328 (26%), Positives = 149/328 (45%), Gaps = 26/328 (7%)

Query: 50  PQKFRSLVDLAASQLCALHSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVET 109
           P +   L +L  +Q+      +  +SRN ++    +   +     + +Q +  S +IV+ 
Sbjct: 443 PIQCEGLANLGVTQIACAEKRFLILSRNGRV--YTQAYNSDTLAPQLVQGLA-SRNIVKI 499

Query: 110 SAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSA 162
           +A     + G ++  L +   V+S G    G LGHG       P+     S  +    + 
Sbjct: 500 AAH----SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQ----AG 551

Query: 163 AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 222
            HVV ++    ++A +   G+++T G  +    GH  +      P LV  LKG+    V 
Sbjct: 552 KHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAI-PVLVAGLKGLKVIDVA 610

Query: 223 AGLNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 280
            G      L +   G V + G   +G+LG G +    TPK I  L+++  VV++  G  +
Sbjct: 611 CGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL-DVVKVRCGSQF 669

Query: 281 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 340
            +A+T +G VYS+G G N  LGHG +     P+ ++    +G  V+ V+AG  H +AL  
Sbjct: 670 SIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGL--QGKKVIDVAAGSTHCLALTE 727

Query: 341 SGYVYTWGKGYCGALGHGDEIDKTLPEP 368
              V++WG        H D +  T PEP
Sbjct: 728 DSEVHSWGSN--DQCQHFDTLRVTKPEP 753



 Score = 75.9 bits (185), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 58/219 (26%), Positives = 100/219 (45%), Gaps = 21/219 (9%)

Query: 271 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 330
           V QIA      L ++ NG VY+    S          D L P+ +Q    + I  +   +
Sbjct: 454 VTQIACAEKRFLILSRNGRVYTQAYNS----------DTLAPQLVQGLASRNIVKIAAHS 503

Query: 331 GDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLA----VQVCARKRK 386
              H +AL ++G VY+WG G  G LGHGD +    P+ +S+     A    V +      
Sbjct: 504 DGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTY 563

Query: 387 TFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVV 444
           +  +   G +Y +G   +G LG    G S+    P ++  L+   V  ++  +G   T+ 
Sbjct: 564 SAAITAEGELYTWGRGNYGRLG---HGSSEDEAIPVLVAGLKGLKVIDVACGSGDAQTLA 620

Query: 445 VTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQEMEE 483
           VT+ G+++ +GD +  +LG     GC  P    I+++++
Sbjct: 621 VTENGQVWSWGDGDYGKLGRGGSDGCKTPK--LIEKLQD 657



 Score = 66.2 bits (160), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 66/225 (29%), Positives = 99/225 (44%), Gaps = 8/225 (3%)

Query: 116  ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
            I  G  H+  L S+  +++ G    G LGHG  TTQ +    +       V+QV+     
Sbjct: 3105 IACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQ-LKPKMVKVLLGHRVIQVACGSRD 3163

Query: 175  AA--FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            A    +   G VF+ GD      G R  +     P+ +E L G    Q+  G  F+  LT
Sbjct: 3164 AQTLALTDEGLVFSWGDGDFGKLG-RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALT 3222

Query: 233  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
              G V T G   + +LGHG  +    P+ +  L     +V +A G  + LAVT  G VY+
Sbjct: 3223 KSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRG-KKIVHVAVGALHCLAVTDAGQVYA 3281

Query: 293  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
            +G   +   G+G      +P  +Q    +G  + RV+ G  H VA
Sbjct: 3282 WGDNDHGQQGNGTTTVNRKPTLVQGL--EGQKITRVACGSSHSVA 3324



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 50/167 (29%), Positives = 76/167 (45%), Gaps = 4/167 (2%)

Query: 118  TGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
            +G   TL L  + +V+S G    G LG G  +  C    +I+  +   VV+V      + 
Sbjct: 4155 SGDAQTLCLTDDDTVWSWGDGDYGKLGRG-GSDGCKVPMKIDSLTGLGVVKVECGSQFSV 4213

Query: 177  FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
             + +SG V+T G       GH   +  + RPR V+ L+G     +  G       T  G 
Sbjct: 4214 ALTKSGAVYTWGKGDYHRLGHGSDDH-VRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGE 4272

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
            V+T G N  GQLG G T     P+ +A L+    V ++A G ++ LA
Sbjct: 4273 VYTWGDNDEGQLGDGTTNAIQRPRLVAALQG-KKVNRVACGSAHTLA 4318



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 52/169 (30%), Positives = 76/169 (44%), Gaps = 8/169 (4%)

Query: 118 TGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
           +G   TL ++ N  V+S G    G LG G  +  C +   I       VV+V      + 
Sbjct: 613 SGDAQTLAVTENGQVWSWGDGDYGKLGRG-GSDGCKTPKLIEKLQDLDVVKVRCGSQFSI 671

Query: 177 FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
            + + GQV++ G   +   GH  T   +  P+L+E L+G     V AG      LT    
Sbjct: 672 ALTKDGQVYSWGKGDNQRLGH-GTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSE 730

Query: 237 VHTCGSNTHGQLGHGDTL--DRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
           VH+ GSN   Q  H DTL   +P P ++  L +   +V IA GP+   A
Sbjct: 731 VHSWGSNDQCQ--HFDTLRVTKPEPAALPGL-DTKHIVGIACGPAQSFA 776



 Score = 52.4 bits (124), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 36/147 (24%), Positives = 71/147 (48%), Gaps = 5/147 (3%)

Query: 332  DEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 391
            D+  ++   SG +Y WG  + G LG  +     +P P  +L +   VQ+   ++  F + 
Sbjct: 3945 DDWTLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVT 4004

Query: 392  DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRG 449
              G +Y     G+G+ G    G ++ V  P +L+S++   + +++  +G  H + ++  G
Sbjct: 4005 ADGKLYA---TGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 4061

Query: 450  RLFGFGDNERAQLGHDTLRGCLEPTEI 476
             ++ +G+ E  +LGH     C  P  I
Sbjct: 4062 EVYSWGEAEDGKLGHGNRSPCDRPRVI 4088



 Score = 45.4 bits (106), Expect = 0.061,   Method: Compositional matrix adjust.
 Identities = 41/139 (29%), Positives = 65/139 (46%), Gaps = 12/139 (8%)

Query: 344  VYTWGKGYCGALG--HGDEID-KTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 400
            V+ WG      LG   G +I   +  E LS+L     VQV    +  F +   G VY  G
Sbjct: 2962 VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALN---VVQVAGGSKSLFAVTVEGKVYACG 3018

Query: 401  WMGFGSLGFPDRGVSD-KVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDN 457
                G LG    G+S   V  PR + +L ++ V +++  +G  H   +T  G++F +G+ 
Sbjct: 3019 EATNGRLGL---GISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEG 3075

Query: 458  ERAQLGHDTLRGCLEPTEI 476
            +  +LGH +   C +P  I
Sbjct: 3076 DDGKLGHFSRMNCDKPRLI 3094


>gi|297603670|ref|NP_001054420.2| Os05g0106700 [Oryza sativa Japonica Group]
 gi|255675937|dbj|BAF16334.2| Os05g0106700 [Oryza sativa Japonica Group]
          Length = 685

 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 100/325 (30%), Positives = 148/325 (45%), Gaps = 19/325 (5%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V  V     HAA V ++G VFT G++S    GH  T      PRLVE+L       V  G
Sbjct: 79  VYHVDCGVRHAALVTRNGDVFTWGEDSGGRLGH-GTREDSVHPRLVESLAACNVDFVACG 137

Query: 225 LNFTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 282
              T  +T  G ++T G  TH  G LGHG       PK I+   +   V  ++ G  +  
Sbjct: 138 EFHTCAVTTTGELYTWGDGTHNVGLLGHGTDAGHWIPKRISGALDGLPVAYVSCGTWHTA 197

Query: 283 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD--- 339
            +T  G +++FG GS   LGHG       P+ +++    G+  + V+ G  H  A+    
Sbjct: 198 LITSMGQLFTFGDGSFGVLGHGNLTSISCPKEVESL--SGLKTIAVACGVWHTAAIVEVI 255

Query: 340 --------SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 391
                   S+G ++TWG G    LGHGD+  +  P  ++SL  +   +V      T  L 
Sbjct: 256 VTHSSSSVSAGKLFTWGDGDKHRLGHGDKESRLKPTCVASLIDYDFYRVACGHSLTVCLT 315

Query: 392 DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRL 451
            +G V   G   +G LG P+   SD  L   + D +   HV Q++ G YH  V+T R  +
Sbjct: 316 TSGKVLSMGNSVYGQLGNPN---SDGRLPCLVEDRIAGEHVLQVACGSYHVAVLTGRSEV 372

Query: 452 FGFGDNERAQLGHDTLRGCLEPTEI 476
           F +G     +LGH  +     PT++
Sbjct: 373 FTWGKGANGRLGHGDIEDRKVPTQV 397



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 81/272 (29%), Positives = 120/272 (44%), Gaps = 18/272 (6%)

Query: 116 ITTGRYHTLLISNSS---VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +  G +HT  ++ +     +  G+   G+LGHG +    +            V  VS   
Sbjct: 134 VACGEFHTCAVTTTGELYTWGDGTHNVGLLGHGTDAGHWIPKRISGALDGLPVAYVSCGT 193

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            H A +   GQ+FT GD S    GH +    I  P+ VE+L G+    V  G+  T  + 
Sbjct: 194 WHTALITSMGQLFTFGDGSFGVLGHGNLT-SISCPKEVESLSGLKTIAVACGVWHTAAIV 252

Query: 233 -----------IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 281
                        G + T G     +LGHGD   R  P  +A L +     ++A G S  
Sbjct: 253 EVIVTHSSSSVSAGKLFTWGDGDKHRLGHGDKESRLKPTCVASLIDY-DFYRVACGHSLT 311

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 341
           + +T +G V S G+     LG+      L P  ++  R  G HV++V+ G  HV  L   
Sbjct: 312 VCLTTSGKVLSMGNSVYGQLGNPNSDGRL-PCLVED-RIAGEHVLQVACGSYHVAVLTGR 369

Query: 342 GYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
             V+TWGKG  G LGHGD  D+ +P  + +LK
Sbjct: 370 SEVFTWGKGANGRLGHGDIEDRKVPTQVEALK 401



 Score = 91.7 bits (226), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 72/243 (29%), Positives = 115/243 (47%), Gaps = 25/243 (10%)

Query: 252 DTLDRPTPKS----IAPLEE--VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGE 305
           DT+ R T K+      PLE   V  V  +  G  +   VT NG V+++G  S   LGHG 
Sbjct: 54  DTIIRSTEKTDFLLPKPLESRLVLDVYHVDCGVRHAALVTRNGDVFTWGEDSGGRLGHGT 113

Query: 306 QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY--CGALGHGDEIDK 363
           + D + PR +++      +V  V+ G+ H  A+ ++G +YTWG G    G LGHG +   
Sbjct: 114 REDSVHPRLVESL--AACNVDFVACGEFHTCAVTTTGELYTWGDGTHNVGLLGHGTDAGH 171

Query: 364 TLPEPLSSLKSHLAVQ-VCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPR 422
            +P+ +S     L V  V      T ++   G ++ FG   FG LG    G    +  P+
Sbjct: 172 WIPKRISGALDGLPVAYVSCGTWHTALITSMGQLFTFGDGSFGVLG---HGNLTSISCPK 228

Query: 423 ILDSLRAHHVSQISTGLYHTVVVTD-----------RGRLFGFGDNERAQLGHDTLRGCL 471
            ++SL       ++ G++HT  + +            G+LF +GD ++ +LGH      L
Sbjct: 229 EVESLSGLKTIAVACGVWHTAAIVEVIVTHSSSSVSAGKLFTWGDGDKHRLGHGDKESRL 288

Query: 472 EPT 474
           +PT
Sbjct: 289 KPT 291



 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 76/281 (27%), Positives = 127/281 (45%), Gaps = 19/281 (6%)

Query: 198 RDTNRPIFR-PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDR 256
           R T +  F  P+ +E+   +    V  G+     +T  G V T G ++ G+LGHG   D 
Sbjct: 58  RSTEKTDFLLPKPLESRLVLDVYHVDCGVRHAALVTRNGDVFTWGEDSGGRLGHGTREDS 117

Query: 257 PTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC--LGHGEQHDELQPRA 314
             P+ +  L    +V  +A G  +  AVT  G +Y++G G++    LGHG       P+ 
Sbjct: 118 VHPRLVESLAAC-NVDFVACGEFHTCAVTTTGELYTWGDGTHNVGLLGHGTDAGHWIPKR 176

Query: 315 IQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKS 374
           I +    G+ V  VS G  H   + S G ++T+G G  G LGHG+    + P+ + SL  
Sbjct: 177 I-SGALDGLPVAYVSCGTWHTALITSMGQLFTFGDGSFGVLGHGNLTSISCPKEVESLSG 235

Query: 375 HLAVQVCARKRKTFVLVD-----------TGSVYGFGWMGFGSLGFPDRGVSDKVLRPRI 423
              + V      T  +V+            G ++ +G      LG  D+   +  L+P  
Sbjct: 236 LKTIAVACGVWHTAAIVEVIVTHSSSSVSAGKLFTWGDGDKHRLGHGDK---ESRLKPTC 292

Query: 424 LDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 464
           + SL  +   +++ G   TV +T  G++   G++   QLG+
Sbjct: 293 VASLIDYDFYRVACGHSLTVCLTTSGKVLSMGNSVYGQLGN 333



 Score = 72.8 bits (177), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 60/221 (27%), Positives = 108/221 (48%), Gaps = 17/221 (7%)

Query: 116 ITTGRYHTLLISN-SSVFSCGSSLCGVLGHG-------PETTQCVSFTRI-----NFPSA 162
           ++ G +HT LI++   +F+ G    GVLGHG       P+  + +S  +           
Sbjct: 189 VSCGTWHTALITSMGQLFTFGDGSFGVLGHGNLTSISCPKEVESLSGLKTIAVACGVWHT 248

Query: 163 AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 222
           A +V+V  +  H++  + +G++FT GD      GH D    + +P  V +L      +V 
Sbjct: 249 AAIVEVIVT--HSSSSVSAGKLFTWGDGDKHRLGHGDKESRL-KPTCVASLIDYDFYRVA 305

Query: 223 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 282
            G + T  LT  G V + G++ +GQLG+ ++ D   P  +        V+Q+A G  ++ 
Sbjct: 306 CGHSLTVCLTTSGKVLSMGNSVYGQLGNPNS-DGRLPCLVEDRIAGEHVLQVACGSYHVA 364

Query: 283 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGI 323
            +TG   V+++G G+N  LGHG+  D   P  ++  + + +
Sbjct: 365 VLTGRSEVFTWGKGANGRLGHGDIEDRKVPTQVEALKDRAV 405



 Score = 56.2 bits (134), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 45/149 (30%), Positives = 67/149 (44%), Gaps = 14/149 (9%)

Query: 339 DSSGYVYTWGKGYC---------GALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFV 389
           DS G VY WG+ +C           +   ++ D  LP+PL S        V    R   +
Sbjct: 32  DSLGDVYVWGEVFCENSVRVGSDTIIRSTEKTDFLLPKPLESRLVLDVYHVDCGVRHAAL 91

Query: 390 LVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRG 449
           +   G V+ +G    G LG    G  +  + PR+++SL A +V  ++ G +HT  VT  G
Sbjct: 92  VTRNGDVFTWGEDSGGRLG---HGTREDSVHPRLVESLAACNVDFVACGEFHTCAVTTTG 148

Query: 450 RLFGFGD--NERAQLGHDTLRGCLEPTEI 476
            L+ +GD  +    LGH T  G   P  I
Sbjct: 149 ELYTWGDGTHNVGLLGHGTDAGHWIPKRI 177


>gi|380787033|gb|AFE65392.1| E3 ubiquitin-protein ligase HERC2 [Macaca mulatta]
          Length = 4834

 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 96/328 (29%), Positives = 158/328 (48%), Gaps = 16/328 (4%)

Query: 161  SAAHVVQVSASENHAAFVLQSGQVFTCGD--NSSFCCGHRDTNRPIFRPRLVEALKGVPC 218
            SA +VVQV+        V   G+V+ CG+  N     G      PI  PR + AL     
Sbjct: 2990 SALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPI--PRQITALSSYVV 3047

Query: 219  KQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA 276
            K+V   +G      LT+ G V + G    G+LGH   ++   P+ I  L+    +  IA 
Sbjct: 3048 KKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALK-TKRIRDIAC 3106

Query: 277  GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEH 334
            G S+  A+T +G +Y++G G    LGHG+   +L+P+ ++     G  V++V+ G  D  
Sbjct: 3107 GSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLL--GHRVIQVACGSRDAQ 3164

Query: 335  VVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 394
             +AL   G V++WG G  G LG G      +P+ +  L      Q+    + +  L  +G
Sbjct: 3165 TLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSG 3224

Query: 395  SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 454
             V+ +G   +  LG    G    V +P++++ LR   +  ++ G  H + VTD G+++ +
Sbjct: 3225 VVWTWGKGDYFRLG---HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAW 3281

Query: 455  GDNERAQLGHDTLRGCLEPTEIFIQEME 482
            GDN+  Q G+ T     +PT   +Q +E
Sbjct: 3282 GDNDHGQQGNGTTTVNRKPT--LVQGLE 3307



 Score =  125 bits (315), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 93/286 (32%), Positives = 140/286 (48%), Gaps = 10/286 (3%)

Query: 183  QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 242
            +VF  G N     G    ++ I  P   E L  +   QV  G      +T+ G V+ CG 
Sbjct: 2960 KVFVWGLNDKDQLGGLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGE 3018

Query: 243  NTHGQLGHG-DTLDRPTPKSIAPLEE-VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 300
             T+G+LG G  +   P P+ I  L   V   V + +G  +  A+T +G V+S+G G +  
Sbjct: 3019 ATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGK 3078

Query: 301  LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 360
            LGH  + +  +PR I+  + K I    ++ G  H  AL SSG +YTWG G  G LGHGD 
Sbjct: 3079 LGHFSRMNCDKPRLIEALKTKRIR--DIACGSSHSAALTSSGELYTWGLGEYGRLGHGDN 3136

Query: 361  IDKTLPEPLSSLKSHLAVQVC--ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKV 418
              +  P+ +  L  H  +QV   +R  +T  L D G V+ +G   FG LG   RG S+  
Sbjct: 3137 TTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLG---RGGSEGC 3193

Query: 419  LRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 464
              P+ ++ L    V QI  G   ++ +T  G ++ +G  +  +LGH
Sbjct: 3194 NIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGH 3239



 Score =  122 bits (305), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 86/280 (30%), Positives = 139/280 (49%), Gaps = 9/280 (3%)

Query: 166  VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 225
            V V++   H   +   G+V++ G+      GH + + P  RPR++E+L+G+    V AG 
Sbjct: 4042 VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRS-PCDRPRVIESLRGIEVVDVAAGG 4100

Query: 226  NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA--AGPSYMLA 283
              +  +T  G ++T G   +G+LGH D+ D+  PK +  L+    VV IA  +G +  L 
Sbjct: 4101 AHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQG-HRVVDIACGSGDAQTLC 4159

Query: 284  VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 343
            +T +  V+S+G G    LG G       P  I +    G+ VV+V  G +  VAL  SG 
Sbjct: 4160 LTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL--TGLGVVKVECGSQFSVALTKSGA 4217

Query: 344  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 403
            VYTWGKG    LGHG +     P  +  L+    + +           + G VY +G   
Sbjct: 4218 VYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDND 4277

Query: 404  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV 443
             G LG    G ++ + RPR++ +L+   V++++ G  HT+
Sbjct: 4278 EGQLG---DGTTNAIQRPRLVAALQGKKVNRVACGSAHTL 4314



 Score =  121 bits (304), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 82/269 (30%), Positives = 131/269 (48%), Gaps = 6/269 (2%)

Query: 207  PRLVEALKGVPCKQV--TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP 264
            P L+E+++ V  K+V   +G      L+  G V++ G    G+LGHG+      P+ I  
Sbjct: 4028 PTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIES 4087

Query: 265  LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH 324
            L  +  VV +AAG ++   VT  G +Y++G G    LGH +  D+L+P+ ++  +   + 
Sbjct: 4088 LRGI-EVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVV 4146

Query: 325  VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARK 384
             +   +GD   + L     V++WG G  G LG G      +P  + SL     V+V    
Sbjct: 4147 DIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGS 4206

Query: 385  RKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV 444
            + +  L  +G+VY +G   +  LG    G  D V RPR +  L+   V  I+TG  H V 
Sbjct: 4207 QFSVALTKSGAVYTWGKGDYHRLG---HGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 4263

Query: 445  VTDRGRLFGFGDNERAQLGHDTLRGCLEP 473
             T+ G ++ +GDN+  QLG  T      P
Sbjct: 4264 CTEDGEVYTWGDNDEGQLGDGTTNAIQRP 4292



 Score =  117 bits (294), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 92/311 (29%), Positives = 151/311 (48%), Gaps = 24/311 (7%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V Q++ +E     + ++G+V+T   NS       DT      P+LV+ L      ++ A 
Sbjct: 453 VTQIACAEKRFLILSRNGRVYTQAYNS-------DT----LAPQLVQGLASRNIVKIAAH 501

Query: 225 LNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGS-VVQIAAGPS 279
            +   +L +   G V++ G    G+LGHGDT+    PK I+    ++ G  VV IA G +
Sbjct: 502 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGST 561

Query: 280 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS--AGDEHVVA 337
           Y  A+T  G +Y++G G+   LGHG   DE  P  +     KG+ V+ V+  +GD   +A
Sbjct: 562 YSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGL--KGLKVIDVACGSGDAQTLA 619

Query: 338 LDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVY 397
           +  +G V++WG G  G LG G       P+ +  L+    V+V    + +  L   G VY
Sbjct: 620 VTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVY 679

Query: 398 GFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDN 457
            +G      LG    G  + V  P++L+ L+   V  ++ G  H + +T+   +  +G N
Sbjct: 680 SWGKGDNQRLG---HGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSN 736

Query: 458 ERAQLGHDTLR 468
           ++ Q   DTLR
Sbjct: 737 DQCQ-HFDTLR 746



 Score =  102 bits (253), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 84/265 (31%), Positives = 126/265 (47%), Gaps = 12/265 (4%)

Query: 96   FLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFT 155
             L+S++H    ++  A N   + G++   L S   V+S G +  G LGHG   + C    
Sbjct: 4030 LLESIQHV--FIKKVAVN---SGGKHCLALSSEGEVYSWGEAEDGKLGHG-NRSPCDRPR 4083

Query: 156  RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 215
             I       VV V+A   H+A V  +G ++T G       GH D+   + +P+LVEAL+G
Sbjct: 4084 VIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQL-KPKLVEALQG 4142

Query: 216  VPCKQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
                 +   +G   T  LT    V + G   +G+LG G +     P  I  L  +G VV+
Sbjct: 4143 HRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLG-VVK 4201

Query: 274  IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
            +  G  + +A+T +G VY++G G    LGHG      +PR +Q    +G  V+ ++ G  
Sbjct: 4202 VECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGL--QGKKVIAIATGSL 4259

Query: 334  HVVALDSSGYVYTWGKGYCGALGHG 358
            H V     G VYTWG    G LG G
Sbjct: 4260 HCVCCTEDGEVYTWGDNDEGQLGDG 4284



 Score =  101 bits (252), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 77/247 (31%), Positives = 125/247 (50%), Gaps = 12/247 (4%)

Query: 235  GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
            G ++  G N  GQLG   G  +  PTP +++A L  V    Q+  G   + AVT +G +Y
Sbjct: 3952 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPV----QLIGGEQTLFAVTADGKLY 4007

Query: 292  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 351
            + G G+   LG G       P  +++ +   I  V V++G +H +AL S G VY+WG+  
Sbjct: 4008 ATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAE 4067

Query: 352  CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 411
             G LGHG+      P  + SL+    V V A    +  +   G +Y +G   +G LG  D
Sbjct: 4068 DGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD 4127

Query: 412  RGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG 469
               S+  L+P+++++L+ H V  I+  +G   T+ +TD   ++ +GD +  +LG     G
Sbjct: 4128 ---SEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDG 4184

Query: 470  CLEPTEI 476
            C  P +I
Sbjct: 4185 CKVPMKI 4191



 Score = 99.8 bits (247), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 79/242 (32%), Positives = 114/242 (47%), Gaps = 7/242 (2%)

Query: 119  GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
            GR+ T L  +  VFS G    G LGH      C     I       +  ++   +H+A +
Sbjct: 3056 GRHATALTVDGKVFSWGEGDDGKLGHF-SRMNCDKPRLIEALKTKRIRDIACGSSHSAAL 3114

Query: 179  LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN--FTGFLTIRGH 236
              SG+++T G       GH D N    +P++V+ L G    QV  G     T  LT  G 
Sbjct: 3115 TSSGELYTWGLGEYGRLGHGD-NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 3173

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 296
            V + G    G+LG G +     P++I  L   G V QI  G  + LA+T +GVV+++G G
Sbjct: 3174 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTWGKG 3232

Query: 297  SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 356
              F LGHG      +P+ ++  R  G  +V V+ G  H +A+  SG VY WG    G  G
Sbjct: 3233 DYFRLGHGSDVHVRKPQVVEGLR--GKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQG 3290

Query: 357  HG 358
            +G
Sbjct: 3291 NG 3292



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 88/328 (26%), Positives = 149/328 (45%), Gaps = 26/328 (7%)

Query: 50  PQKFRSLVDLAASQLCALHSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVET 109
           P +   L +L  +Q+      +  +SRN ++    +   +     + +Q +  S +IV+ 
Sbjct: 442 PIQCEGLANLGVTQIACAEKRFLILSRNGRV--YTQAYNSDTLAPQLVQGLA-SRNIVKI 498

Query: 110 SAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSA 162
           +A     + G ++  L +   V+S G    G LGHG       P+     S  +    + 
Sbjct: 499 AAH----SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQ----AG 550

Query: 163 AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 222
            HVV ++    ++A +   G+++T G  +    GH  +      P LV  LKG+    V 
Sbjct: 551 KHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVA 609

Query: 223 AGLNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 280
            G      L +   G V + G   +G+LG G +    TPK I  L+++  VV++  G  +
Sbjct: 610 CGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL-DVVKVRCGSQF 668

Query: 281 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 340
            +A+T +G VYS+G G N  LGHG +     P+ ++    +G  V+ V+AG  H +AL  
Sbjct: 669 SIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGL--QGKKVIDVAAGSTHCLALTE 726

Query: 341 SGYVYTWGKGYCGALGHGDEIDKTLPEP 368
              V++WG        H D +  T PEP
Sbjct: 727 DSEVHSWGSN--DQCQHFDTLRVTKPEP 752



 Score = 76.6 bits (187), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 58/219 (26%), Positives = 100/219 (45%), Gaps = 21/219 (9%)

Query: 271 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 330
           V QIA      L ++ NG VY+    S          D L P+ +Q    + I  +   +
Sbjct: 453 VTQIACAEKRFLILSRNGRVYTQAYNS----------DTLAPQLVQGLASRNIVKIAAHS 502

Query: 331 GDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLA----VQVCARKRK 386
              H +AL ++G VY+WG G  G LGHGD +    P+ +S+     A    V +      
Sbjct: 503 DGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTY 562

Query: 387 TFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVV 444
           +  +   G +Y +G   +G LG    G S+    P ++  L+   V  ++  +G   T+ 
Sbjct: 563 SAAITAEGELYTWGRGNYGRLG---HGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLA 619

Query: 445 VTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQEMEE 483
           VT+ G+++ +GD +  +LG     GC  P    I+++++
Sbjct: 620 VTENGQVWSWGDGDYGKLGRGGSDGCKTPK--LIEKLQD 656



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 66/225 (29%), Positives = 100/225 (44%), Gaps = 8/225 (3%)

Query: 116  ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
            I  G  H+  L S+  +++ G    G LGHG  TTQ +    +       V+QV+     
Sbjct: 3104 IACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQ-LKPKMVKVLLGHRVIQVACGSRD 3162

Query: 175  AA--FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            A    +   G VF+ GD      G R  +     P+ +E L G    Q+  G  F+  LT
Sbjct: 3163 AQTLALTDEGLVFSWGDGDFGKLG-RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALT 3221

Query: 233  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
              G V T G   + +LGHG  +    P+ +  L     +V +A G  + LAVT +G VY+
Sbjct: 3222 KSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRG-KKIVHVAVGALHCLAVTDSGQVYA 3280

Query: 293  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
            +G   +   G+G      +P  +Q    +G  + RV+ G  H VA
Sbjct: 3281 WGDNDHGQQGNGTTTVNRKPTLVQGL--EGQKITRVACGSSHSVA 3323



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 50/167 (29%), Positives = 76/167 (45%), Gaps = 4/167 (2%)

Query: 118  TGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
            +G   TL L  + +V+S G    G LG G  +  C    +I+  +   VV+V      + 
Sbjct: 4152 SGDAQTLCLTDDDTVWSWGDGDYGKLGRG-GSDGCKVPMKIDSLTGLGVVKVECGSQFSV 4210

Query: 177  FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
             + +SG V+T G       GH   +  + RPR V+ L+G     +  G       T  G 
Sbjct: 4211 ALTKSGAVYTWGKGDYHRLGHGSDDH-VRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGE 4269

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
            V+T G N  GQLG G T     P+ +A L+    V ++A G ++ LA
Sbjct: 4270 VYTWGDNDEGQLGDGTTNAIQRPRLVAALQG-KKVNRVACGSAHTLA 4315



 Score = 53.5 bits (127), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 52/169 (30%), Positives = 76/169 (44%), Gaps = 8/169 (4%)

Query: 118 TGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
           +G   TL ++ N  V+S G    G LG G  +  C +   I       VV+V      + 
Sbjct: 612 SGDAQTLAVTENGQVWSWGDGDYGKLGRG-GSDGCKTPKLIEKLQDLDVVKVRCGSQFSI 670

Query: 177 FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
            + + GQV++ G   +   GH  T   +  P+L+E L+G     V AG      LT    
Sbjct: 671 ALTKDGQVYSWGKGDNQRLGH-GTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSE 729

Query: 237 VHTCGSNTHGQLGHGDTL--DRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
           VH+ GSN   Q  H DTL   +P P ++  L +   +V IA GP+   A
Sbjct: 730 VHSWGSNDQCQ--HFDTLRVTKPEPAALPGL-DTKHIVGIACGPAQSFA 775



 Score = 52.0 bits (123), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 36/147 (24%), Positives = 71/147 (48%), Gaps = 5/147 (3%)

Query: 332  DEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 391
            D+  ++   SG +Y WG  + G LG  +     +P P  +L +   VQ+   ++  F + 
Sbjct: 3942 DDWTLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVT 4001

Query: 392  DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRG 449
              G +Y     G+G+ G    G ++ V  P +L+S++   + +++  +G  H + ++  G
Sbjct: 4002 ADGKLYA---TGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 4058

Query: 450  RLFGFGDNERAQLGHDTLRGCLEPTEI 476
             ++ +G+ E  +LGH     C  P  I
Sbjct: 4059 EVYSWGEAEDGKLGHGNRSPCDRPRVI 4085



 Score = 45.4 bits (106), Expect = 0.068,   Method: Compositional matrix adjust.
 Identities = 45/161 (27%), Positives = 74/161 (45%), Gaps = 14/161 (8%)

Query: 322  GIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG--HGDEID-KTLPEPLSSLKSHLAV 378
            G  + + +AG E    + +   V+ WG      LG   G +I   +  E LS+L     V
Sbjct: 2941 GSLIRKKAAGLESAATIRTK--VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALN---VV 2995

Query: 379  QVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSD-KVLRPRILDSLRAHHVSQIS- 436
            QV    +  F +   G VY  G    G LG    G+S   V  PR + +L ++ V +++ 
Sbjct: 2996 QVAGGSKSLFAVTVEGKVYACGEATNGRLGL---GISSGTVPIPRQITALSSYVVKKVAV 3052

Query: 437  -TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 476
             +G  H   +T  G++F +G+ +  +LGH +   C +P  I
Sbjct: 3053 HSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLI 3093


>gi|426220634|ref|XP_004004519.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Ovis aries]
          Length = 4836

 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 96/328 (29%), Positives = 158/328 (48%), Gaps = 16/328 (4%)

Query: 161  SAAHVVQVSASENHAAFVLQSGQVFTCGD--NSSFCCGHRDTNRPIFRPRLVEALKGVPC 218
            SA +VVQV+        V   G+V+ CG+  N     G      PI  PR + AL     
Sbjct: 2991 SALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPI--PRQITALSSYVV 3048

Query: 219  KQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA 276
            K+V   +G      LT+ G V + G    G+LGH   ++   P+ I  L+    +  IA 
Sbjct: 3049 KKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALK-TKRIRDIAC 3107

Query: 277  GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEH 334
            G S+  A+T +G +Y++G G    LGHG+   +L+P+ ++     G  V++V+ G  D  
Sbjct: 3108 GSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLL--GHRVIQVACGSRDAQ 3165

Query: 335  VVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 394
             +AL   G V++WG G  G LG G      +P+ +  L      Q+    + +  L  +G
Sbjct: 3166 TLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSG 3225

Query: 395  SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 454
             V+ +G   +  LG    G    V +P++++ LR   +  ++ G  H + VTD G+++ +
Sbjct: 3226 VVWTWGKGDYFRLG---HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAW 3282

Query: 455  GDNERAQLGHDTLRGCLEPTEIFIQEME 482
            GDN+  Q G+ T     +PT   +Q +E
Sbjct: 3283 GDNDHGQQGNGTTTVNRKPT--LVQGLE 3308



 Score =  125 bits (315), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 93/286 (32%), Positives = 140/286 (48%), Gaps = 10/286 (3%)

Query: 183  QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 242
            +VF  G N     G    ++ I  P   E L  +   QV  G      +T+ G V+ CG 
Sbjct: 2961 KVFVWGLNDKDQLGGLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGE 3019

Query: 243  NTHGQLGHG-DTLDRPTPKSIAPLEE-VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 300
             T+G+LG G  +   P P+ I  L   V   V + +G  +  A+T +G V+S+G G +  
Sbjct: 3020 ATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGK 3079

Query: 301  LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 360
            LGH  + +  +PR I+  + K I    ++ G  H  AL SSG +YTWG G  G LGHGD 
Sbjct: 3080 LGHFSRMNCDKPRLIEALKTKRIR--DIACGSSHSAALTSSGELYTWGLGEYGRLGHGDN 3137

Query: 361  IDKTLPEPLSSLKSHLAVQVC--ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKV 418
              +  P+ +  L  H  +QV   +R  +T  L D G V+ +G   FG LG   RG S+  
Sbjct: 3138 TTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLG---RGGSEGC 3194

Query: 419  LRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 464
              P+ ++ L    V QI  G   ++ +T  G ++ +G  +  +LGH
Sbjct: 3195 NIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGH 3240



 Score =  119 bits (299), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 85/280 (30%), Positives = 138/280 (49%), Gaps = 9/280 (3%)

Query: 166  VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 225
            V V++   H   +   G+V++ G+      GH + + P  RPR++E+L+G     V AG 
Sbjct: 4044 VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRS-PCDRPRVIESLRGTEVVDVAAGG 4102

Query: 226  NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA--AGPSYMLA 283
              +  +T  G ++T G   +G+LGH D+ D+  PK +  L+    VV +A  +G +  L 
Sbjct: 4103 AHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQG-HRVVDVACGSGDAQTLC 4161

Query: 284  VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 343
            +T +  V+S+G G    LG G       P  I +    G+ VV+V  G +  VAL  SG 
Sbjct: 4162 LTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL--TGLGVVKVECGSQFSVALTKSGA 4219

Query: 344  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 403
            VYTWGKG    LGHG +     P  +  L+    + +           + G VY +G   
Sbjct: 4220 VYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCSEDGEVYTWGDND 4279

Query: 404  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV 443
             G LG    G ++ + RPR++ +L+   V++++ G  HT+
Sbjct: 4280 EGQLG---DGTTNAIQRPRLVAALQGKKVNRVACGSAHTL 4316



 Score =  119 bits (299), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 91/315 (28%), Positives = 146/315 (46%), Gaps = 7/315 (2%)

Query: 161  SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQ 220
            +A   VQ+   E     V   G+++  G  +    G   T   +  P L+E+++ V  K+
Sbjct: 3985 AALRPVQLIGGEQTLFAVTADGKLYATGYGAGGRLGVGGTES-VSTPTLLESIQHVFIKK 4043

Query: 221  V--TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGP 278
            V   +G      L+  G V++ G    G+LGHG+      P+ I  L     VV +AAG 
Sbjct: 4044 VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGT-EVVDVAAGG 4102

Query: 279  SYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
            ++   VT  G +Y++G G    LGH +  D+L+P+ ++  +   +  V   +GD   + L
Sbjct: 4103 AHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLCL 4162

Query: 339  DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYG 398
                 V++WG G  G LG G      +P  + SL     V+V    + +  L  +G+VY 
Sbjct: 4163 TDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYT 4222

Query: 399  FGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNE 458
            +G   +  LG    G  D V RPR +  L+   V  I+TG  H V  ++ G ++ +GDN+
Sbjct: 4223 WGKGDYHRLG---HGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCSEDGEVYTWGDND 4279

Query: 459  RAQLGHDTLRGCLEP 473
              QLG  T      P
Sbjct: 4280 EGQLGDGTTNAIQRP 4294



 Score =  117 bits (294), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 92/311 (29%), Positives = 151/311 (48%), Gaps = 24/311 (7%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V Q++ +E     + ++G+V+T   NS       DT      P+LV+ L      ++ A 
Sbjct: 454 VTQIACAEKRFLILSRNGRVYTQAYNS-------DT----LAPQLVQGLASRNIVKIAAH 502

Query: 225 LNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGS-VVQIAAGPS 279
            +   +L +   G V++ G    G+LGHGDT+    PK I+    ++ G  VV IA G +
Sbjct: 503 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGST 562

Query: 280 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS--AGDEHVVA 337
           Y  A+T  G +Y++G G+   LGHG   DE  P  +     KG+ V+ V+  +GD   +A
Sbjct: 563 YSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGL--KGLKVIDVACGSGDAQTLA 620

Query: 338 LDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVY 397
           +  +G V++WG G  G LG G       P+ +  L+    V+V    + +  L   G VY
Sbjct: 621 VTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVY 680

Query: 398 GFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDN 457
            +G      LG    G  + V  P++L+ L+   V  ++ G  H + +T+   +  +G N
Sbjct: 681 SWGKGDNQRLG---HGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSN 737

Query: 458 ERAQLGHDTLR 468
           ++ Q   DTLR
Sbjct: 738 DQCQ-HFDTLR 747



 Score =  103 bits (256), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 85/265 (32%), Positives = 126/265 (47%), Gaps = 12/265 (4%)

Query: 96   FLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFT 155
             L+S++H    ++  A N   + G++   L S   V+S G +  G LGHG   + C    
Sbjct: 4032 LLESIQHV--FIKKVAVN---SGGKHCLALSSEGEVYSWGEAEDGKLGHG-NRSPCDRPR 4085

Query: 156  RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 215
             I       VV V+A   H+A V  +G ++T G       GH D+   + +P+LVEAL+G
Sbjct: 4086 VIESLRGTEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQL-KPKLVEALQG 4144

Query: 216  VPCKQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
                 V   +G   T  LT    V + G   +G+LG G +     P  I  L  +G VV+
Sbjct: 4145 HRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLG-VVK 4203

Query: 274  IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
            +  G  + +A+T +G VY++G G    LGHG      +PR +Q    +G  V+ ++ G  
Sbjct: 4204 VECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGL--QGKKVIAIATGSL 4261

Query: 334  HVVALDSSGYVYTWGKGYCGALGHG 358
            H V     G VYTWG    G LG G
Sbjct: 4262 HCVCCSEDGEVYTWGDNDEGQLGDG 4286



 Score =  101 bits (252), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 76/247 (30%), Positives = 125/247 (50%), Gaps = 12/247 (4%)

Query: 235  GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
            G ++  G N  GQLG   G  +  PTP +++A L  V    Q+  G   + AVT +G +Y
Sbjct: 3954 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALAALRPV----QLIGGEQTLFAVTADGKLY 4009

Query: 292  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 351
            + G G+   LG G       P  +++ +   I  V V++G +H +AL S G VY+WG+  
Sbjct: 4010 ATGYGAGGRLGVGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAE 4069

Query: 352  CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 411
             G LGHG+      P  + SL+    V V A    +  +   G +Y +G   +G LG  D
Sbjct: 4070 DGKLGHGNRSPCDRPRVIESLRGTEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD 4129

Query: 412  RGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG 469
               S+  L+P+++++L+ H V  ++  +G   T+ +TD   ++ +GD +  +LG     G
Sbjct: 4130 ---SEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDG 4186

Query: 470  CLEPTEI 476
            C  P +I
Sbjct: 4187 CKVPMKI 4193



 Score = 98.6 bits (244), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 78/242 (32%), Positives = 114/242 (47%), Gaps = 7/242 (2%)

Query: 119  GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
            GR+ T L  +  VFS G    G LGH      C     I       +  ++   +H+A +
Sbjct: 3057 GRHATALTVDGKVFSWGEGDDGKLGHF-SRMNCDKPRLIEALKTKRIRDIACGSSHSAAL 3115

Query: 179  LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN--FTGFLTIRGH 236
              SG+++T G       GH D N    +P++V+ L G    QV  G     T  LT  G 
Sbjct: 3116 TSSGELYTWGLGEYGRLGHGD-NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 3174

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 296
            V + G    G+LG G +     P++I  L   G V QI  G  + LA+T +GVV+++G G
Sbjct: 3175 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTWGKG 3233

Query: 297  SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 356
              F LGHG      +P+ ++  R  G  +V V+ G  H +A+  +G VY WG    G  G
Sbjct: 3234 DYFRLGHGSDVHVRKPQVVEGLR--GKKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQG 3291

Query: 357  HG 358
            +G
Sbjct: 3292 NG 3293



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 88/328 (26%), Positives = 149/328 (45%), Gaps = 26/328 (7%)

Query: 50  PQKFRSLVDLAASQLCALHSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVET 109
           P +   L +L  +Q+      +  +SRN ++    +   +     + +Q +  S +IV+ 
Sbjct: 443 PIQCEGLANLGVTQIACAEKRFLILSRNGRV--YTQAYNSDTLAPQLVQGLA-SRNIVKI 499

Query: 110 SAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSA 162
           +A     + G ++  L +   V+S G    G LGHG       P+     S  +    + 
Sbjct: 500 AAH----SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQ----AG 551

Query: 163 AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 222
            HVV ++    ++A +   G+++T G  +    GH  +      P LV  LKG+    V 
Sbjct: 552 KHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVA 610

Query: 223 AGLNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 280
            G      L +   G V + G   +G+LG G +    TPK I  L+++  VV++  G  +
Sbjct: 611 CGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL-DVVKVRCGSQF 669

Query: 281 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 340
            +A+T +G VYS+G G N  LGHG +     P+ ++    +G  V+ V+AG  H +AL  
Sbjct: 670 SIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGL--QGKKVIDVAAGSTHCLALTE 727

Query: 341 SGYVYTWGKGYCGALGHGDEIDKTLPEP 368
              V++WG        H D +  T PEP
Sbjct: 728 DSEVHSWGSN--DQCQHFDTLRVTKPEP 753



 Score = 76.6 bits (187), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 58/219 (26%), Positives = 100/219 (45%), Gaps = 21/219 (9%)

Query: 271 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 330
           V QIA      L ++ NG VY+    S          D L P+ +Q    + I  +   +
Sbjct: 454 VTQIACAEKRFLILSRNGRVYTQAYNS----------DTLAPQLVQGLASRNIVKIAAHS 503

Query: 331 GDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLA----VQVCARKRK 386
              H +AL ++G VY+WG G  G LGHGD +    P+ +S+     A    V +      
Sbjct: 504 DGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTY 563

Query: 387 TFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVV 444
           +  +   G +Y +G   +G LG    G S+    P ++  L+   V  ++  +G   T+ 
Sbjct: 564 SAAITAEGELYTWGRGNYGRLG---HGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLA 620

Query: 445 VTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQEMEE 483
           VT+ G+++ +GD +  +LG     GC  P    I+++++
Sbjct: 621 VTENGQVWSWGDGDYGKLGRGGSDGCKTPK--LIEKLQD 657



 Score = 66.2 bits (160), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 66/225 (29%), Positives = 99/225 (44%), Gaps = 8/225 (3%)

Query: 116  ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
            I  G  H+  L S+  +++ G    G LGHG  TTQ +    +       V+QV+     
Sbjct: 3105 IACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQ-LKPKMVKVLLGHRVIQVACGSRD 3163

Query: 175  AA--FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            A    +   G VF+ GD      G R  +     P+ +E L G    Q+  G  F+  LT
Sbjct: 3164 AQTLALTDEGLVFSWGDGDFGKLG-RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALT 3222

Query: 233  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
              G V T G   + +LGHG  +    P+ +  L     +V +A G  + LAVT  G VY+
Sbjct: 3223 KSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRG-KKIVHVAVGALHCLAVTDAGQVYA 3281

Query: 293  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
            +G   +   G+G      +P  +Q    +G  + RV+ G  H VA
Sbjct: 3282 WGDNDHGQQGNGTTTVNRKPTLVQGL--EGQKITRVACGSSHSVA 3324



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 52/169 (30%), Positives = 76/169 (44%), Gaps = 8/169 (4%)

Query: 118 TGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
           +G   TL ++ N  V+S G    G LG G  +  C +   I       VV+V      + 
Sbjct: 613 SGDAQTLAVTENGQVWSWGDGDYGKLGRG-GSDGCKTPKLIEKLQDLDVVKVRCGSQFSI 671

Query: 177 FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
            + + GQV++ G   +   GH  T   +  P+L+E L+G     V AG      LT    
Sbjct: 672 ALTKDGQVYSWGKGDNQRLGH-GTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSE 730

Query: 237 VHTCGSNTHGQLGHGDTL--DRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
           VH+ GSN   Q  H DTL   +P P ++  L +   +V IA GP+   A
Sbjct: 731 VHSWGSNDQCQ--HFDTLRVTKPEPSALPGL-DTKHIVGIACGPAQSFA 776



 Score = 53.1 bits (126), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 49/167 (29%), Positives = 76/167 (45%), Gaps = 4/167 (2%)

Query: 118  TGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
            +G   TL L  + +V+S G    G LG G  +  C    +I+  +   VV+V      + 
Sbjct: 4154 SGDAQTLCLTDDDTVWSWGDGDYGKLGRG-GSDGCKVPMKIDSLTGLGVVKVECGSQFSV 4212

Query: 177  FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
             + +SG V+T G       GH   +  + RPR V+ L+G     +  G       +  G 
Sbjct: 4213 ALTKSGAVYTWGKGDYHRLGHGSDDH-VRRPRQVQGLQGKKVIAIATGSLHCVCCSEDGE 4271

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
            V+T G N  GQLG G T     P+ +A L+    V ++A G ++ LA
Sbjct: 4272 VYTWGDNDEGQLGDGTTNAIQRPRLVAALQG-KKVNRVACGSAHTLA 4317



 Score = 52.4 bits (124), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 36/147 (24%), Positives = 71/147 (48%), Gaps = 5/147 (3%)

Query: 332  DEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 391
            D+  ++   SG +Y WG  + G LG  +     +P P  +L +   VQ+   ++  F + 
Sbjct: 3944 DDWTLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALAALRPVQLIGGEQTLFAVT 4003

Query: 392  DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRG 449
              G +Y     G+G+ G    G ++ V  P +L+S++   + +++  +G  H + ++  G
Sbjct: 4004 ADGKLYA---TGYGAGGRLGVGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 4060

Query: 450  RLFGFGDNERAQLGHDTLRGCLEPTEI 476
             ++ +G+ E  +LGH     C  P  I
Sbjct: 4061 EVYSWGEAEDGKLGHGNRSPCDRPRVI 4087



 Score = 46.6 bits (109), Expect = 0.028,   Method: Compositional matrix adjust.
 Identities = 46/161 (28%), Positives = 74/161 (45%), Gaps = 14/161 (8%)

Query: 322  GIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG--HGDEID-KTLPEPLSSLKSHLAV 378
            G  + R +AG E    + +   V+ WG      LG   G +I   +  E LS+L     V
Sbjct: 2942 GSLIRRKAAGLESAATIRTK--VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALN---VV 2996

Query: 379  QVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSD-KVLRPRILDSLRAHHVSQIS- 436
            QV    +  F +   G VY  G    G LG    G+S   V  PR + +L ++ V +++ 
Sbjct: 2997 QVAGGSKSLFAVTVEGKVYACGEATNGRLGL---GISSGTVPIPRQITALSSYVVKKVAV 3053

Query: 437  -TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 476
             +G  H   +T  G++F +G+ +  +LGH +   C +P  I
Sbjct: 3054 HSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLI 3094


>gi|410349247|gb|JAA41227.1| hect domain and RLD 2 [Pan troglodytes]
          Length = 4834

 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 96/328 (29%), Positives = 158/328 (48%), Gaps = 16/328 (4%)

Query: 161  SAAHVVQVSASENHAAFVLQSGQVFTCGD--NSSFCCGHRDTNRPIFRPRLVEALKGVPC 218
            SA +VVQV+        V   G+V+ CG+  N     G      PI  PR + AL     
Sbjct: 2990 SALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPI--PRQITALSSYVV 3047

Query: 219  KQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA 276
            K+V   +G      LT+ G V + G    G+LGH   ++   P+ I  L+    +  IA 
Sbjct: 3048 KKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALK-TKRIRDIAC 3106

Query: 277  GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEH 334
            G S+  A+T +G +Y++G G    LGHG+   +L+P+ ++     G  V++V+ G  D  
Sbjct: 3107 GSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLL--GHRVIQVACGSRDAQ 3164

Query: 335  VVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 394
             +AL   G V++WG G  G LG G      +P+ +  L      Q+    + +  L  +G
Sbjct: 3165 TLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSG 3224

Query: 395  SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 454
             V+ +G   +  LG    G    V +P++++ LR   +  ++ G  H + VTD G+++ +
Sbjct: 3225 VVWTWGKGDYFRLG---HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAW 3281

Query: 455  GDNERAQLGHDTLRGCLEPTEIFIQEME 482
            GDN+  Q G+ T     +PT   +Q +E
Sbjct: 3282 GDNDHGQQGNGTTTVNRKPT--LVQGLE 3307



 Score =  125 bits (315), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 93/286 (32%), Positives = 140/286 (48%), Gaps = 10/286 (3%)

Query: 183  QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 242
            +VF  G N     G    ++ I  P   E L  +   QV  G      +T+ G V+ CG 
Sbjct: 2960 KVFVWGLNDKDQLGGLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGE 3018

Query: 243  NTHGQLGHG-DTLDRPTPKSIAPLEE-VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 300
             T+G+LG G  +   P P+ I  L   V   V + +G  +  A+T +G V+S+G G +  
Sbjct: 3019 ATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGK 3078

Query: 301  LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 360
            LGH  + +  +PR I+  + K I    ++ G  H  AL SSG +YTWG G  G LGHGD 
Sbjct: 3079 LGHFSRMNCDKPRLIEALKTKRIR--DIACGSSHSAALTSSGELYTWGLGEYGRLGHGDN 3136

Query: 361  IDKTLPEPLSSLKSHLAVQVC--ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKV 418
              +  P+ +  L  H  +QV   +R  +T  L D G V+ +G   FG LG   RG S+  
Sbjct: 3137 TTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLG---RGGSEGC 3193

Query: 419  LRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 464
              P+ ++ L    V QI  G   ++ +T  G ++ +G  +  +LGH
Sbjct: 3194 NIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGH 3239



 Score =  122 bits (305), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 86/280 (30%), Positives = 139/280 (49%), Gaps = 9/280 (3%)

Query: 166  VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 225
            V V++   H   +   G+V++ G+      GH + + P  RPR++E+L+G+    V AG 
Sbjct: 4042 VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRS-PCDRPRVIESLRGIEVVDVAAGG 4100

Query: 226  NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA--AGPSYMLA 283
              +  +T  G ++T G   +G+LGH D+ D+  PK +  L+    VV IA  +G +  L 
Sbjct: 4101 AHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQG-HRVVDIACGSGDAQTLC 4159

Query: 284  VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 343
            +T +  V+S+G G    LG G       P  I +    G+ VV+V  G +  VAL  SG 
Sbjct: 4160 LTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL--TGLGVVKVECGSQFSVALTKSGA 4217

Query: 344  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 403
            VYTWGKG    LGHG +     P  +  L+    + +           + G VY +G   
Sbjct: 4218 VYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDND 4277

Query: 404  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV 443
             G LG    G ++ + RPR++ +L+   V++++ G  HT+
Sbjct: 4278 EGQLG---DGTTNAIQRPRLVAALQGKKVNRVACGSAHTL 4314



 Score =  121 bits (303), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 82/269 (30%), Positives = 131/269 (48%), Gaps = 6/269 (2%)

Query: 207  PRLVEALKGVPCKQV--TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP 264
            P L+E+++ V  K+V   +G      L+  G V++ G    G+LGHG+      P+ I  
Sbjct: 4028 PTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIES 4087

Query: 265  LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH 324
            L  +  VV +AAG ++   VT  G +Y++G G    LGH +  D+L+P+ ++  +   + 
Sbjct: 4088 LRGI-EVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVV 4146

Query: 325  VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARK 384
             +   +GD   + L     V++WG G  G LG G      +P  + SL     V+V    
Sbjct: 4147 DIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGS 4206

Query: 385  RKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV 444
            + +  L  +G+VY +G   +  LG    G  D V RPR +  L+   V  I+TG  H V 
Sbjct: 4207 QFSVALTKSGAVYTWGKGDYHRLG---HGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 4263

Query: 445  VTDRGRLFGFGDNERAQLGHDTLRGCLEP 473
             T+ G ++ +GDN+  QLG  T      P
Sbjct: 4264 CTEDGEVYTWGDNDEGQLGDGTTNAIQRP 4292



 Score =  117 bits (294), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 92/311 (29%), Positives = 151/311 (48%), Gaps = 24/311 (7%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V Q++ +E     + ++G+V+T   NS       DT      P+LV+ L      ++ A 
Sbjct: 453 VTQIACAEKRFLILSRNGRVYTQAYNS-------DT----LAPQLVQGLASRNIVKIAAH 501

Query: 225 LNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGS-VVQIAAGPS 279
            +   +L +   G V++ G    G+LGHGDT+    PK I+    ++ G  VV IA G +
Sbjct: 502 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGST 561

Query: 280 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS--AGDEHVVA 337
           Y  A+T  G +Y++G G+   LGHG   DE  P  +     KG+ V+ V+  +GD   +A
Sbjct: 562 YSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGL--KGLKVIDVACGSGDAQTLA 619

Query: 338 LDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVY 397
           +  +G V++WG G  G LG G       P+ +  L+    V+V    + +  L   G VY
Sbjct: 620 VTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVY 679

Query: 398 GFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDN 457
            +G      LG    G  + V  P++L+ L+   V  ++ G  H + +T+   +  +G N
Sbjct: 680 SWGKGDNQRLG---HGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSN 736

Query: 458 ERAQLGHDTLR 468
           ++ Q   DTLR
Sbjct: 737 DQCQ-HFDTLR 746



 Score =  102 bits (253), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 84/265 (31%), Positives = 126/265 (47%), Gaps = 12/265 (4%)

Query: 96   FLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFT 155
             L+S++H    ++  A N   + G++   L S   V+S G +  G LGHG   + C    
Sbjct: 4030 LLESIQHV--FIKKVAVN---SGGKHCLALSSEGEVYSWGEAEDGKLGHG-NRSPCDRPR 4083

Query: 156  RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 215
             I       VV V+A   H+A V  +G ++T G       GH D+   + +P+LVEAL+G
Sbjct: 4084 VIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQL-KPKLVEALQG 4142

Query: 216  VPCKQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
                 +   +G   T  LT    V + G   +G+LG G +     P  I  L  +G VV+
Sbjct: 4143 HRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLG-VVK 4201

Query: 274  IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
            +  G  + +A+T +G VY++G G    LGHG      +PR +Q    +G  V+ ++ G  
Sbjct: 4202 VECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGL--QGKKVIAIATGSL 4259

Query: 334  HVVALDSSGYVYTWGKGYCGALGHG 358
            H V     G VYTWG    G LG G
Sbjct: 4260 HCVCCTEDGEVYTWGDNDEGQLGDG 4284



 Score =  101 bits (252), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 77/247 (31%), Positives = 125/247 (50%), Gaps = 12/247 (4%)

Query: 235  GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
            G ++  G N  GQLG   G  +  PTP +++A L  V    Q+  G   + AVT +G +Y
Sbjct: 3952 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPV----QLIGGEQTLFAVTADGKLY 4007

Query: 292  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 351
            + G G+   LG G       P  +++ +   I  V V++G +H +AL S G VY+WG+  
Sbjct: 4008 ATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAE 4067

Query: 352  CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 411
             G LGHG+      P  + SL+    V V A    +  +   G +Y +G   +G LG  D
Sbjct: 4068 DGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD 4127

Query: 412  RGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG 469
               S+  L+P+++++L+ H V  I+  +G   T+ +TD   ++ +GD +  +LG     G
Sbjct: 4128 ---SEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDG 4184

Query: 470  CLEPTEI 476
            C  P +I
Sbjct: 4185 CKVPMKI 4191



 Score = 99.8 bits (247), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 79/242 (32%), Positives = 114/242 (47%), Gaps = 7/242 (2%)

Query: 119  GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
            GR+ T L  +  VFS G    G LGH      C     I       +  ++   +H+A +
Sbjct: 3056 GRHATALTVDGKVFSWGEGDDGKLGHFSRMN-CDKPRLIEALKTKRIRDIACGSSHSAAL 3114

Query: 179  LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN--FTGFLTIRGH 236
              SG+++T G       GH D N    +P++V+ L G    QV  G     T  LT  G 
Sbjct: 3115 TSSGELYTWGLGEYGRLGHGD-NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 3173

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 296
            V + G    G+LG G +     P++I  L   G V QI  G  + LA+T +GVV+++G G
Sbjct: 3174 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTWGKG 3232

Query: 297  SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 356
              F LGHG      +P+ ++  R  G  +V V+ G  H +A+  SG VY WG    G  G
Sbjct: 3233 DYFRLGHGSDVHVRKPQVVEGLR--GKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQG 3290

Query: 357  HG 358
            +G
Sbjct: 3291 NG 3292



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 88/328 (26%), Positives = 149/328 (45%), Gaps = 26/328 (7%)

Query: 50  PQKFRSLVDLAASQLCALHSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVET 109
           P +   L +L  +Q+      +  +SRN ++    +   +     + +Q +  S +IV+ 
Sbjct: 442 PIQCEGLANLGVTQIACAEKRFLILSRNGRV--YTQAYNSDTLAPQLVQGLA-SRNIVKI 498

Query: 110 SAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSA 162
           +A     + G ++  L +   V+S G    G LGHG       P+     S  +    + 
Sbjct: 499 AAH----SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQ----AG 550

Query: 163 AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 222
            HVV ++    ++A +   G+++T G  +    GH  +      P LV  LKG+    V 
Sbjct: 551 KHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVA 609

Query: 223 AGLNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 280
            G      L +   G V + G   +G+LG G +    TPK I  L+++  VV++  G  +
Sbjct: 610 CGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL-DVVKVRCGSQF 668

Query: 281 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 340
            +A+T +G VYS+G G N  LGHG +     P+ ++    +G  V+ V+AG  H +AL  
Sbjct: 669 SIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGL--QGKKVIDVAAGSTHCLALTE 726

Query: 341 SGYVYTWGKGYCGALGHGDEIDKTLPEP 368
              V++WG        H D +  T PEP
Sbjct: 727 DSEVHSWGSN--DQCQHFDTLRVTKPEP 752



 Score = 76.3 bits (186), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 58/219 (26%), Positives = 100/219 (45%), Gaps = 21/219 (9%)

Query: 271 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 330
           V QIA      L ++ NG VY+    S          D L P+ +Q    + I  +   +
Sbjct: 453 VTQIACAEKRFLILSRNGRVYTQAYNS----------DTLAPQLVQGLASRNIVKIAAHS 502

Query: 331 GDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLA----VQVCARKRK 386
              H +AL ++G VY+WG G  G LGHGD +    P+ +S+     A    V +      
Sbjct: 503 DGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTY 562

Query: 387 TFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVV 444
           +  +   G +Y +G   +G LG    G S+    P ++  L+   V  ++  +G   T+ 
Sbjct: 563 SAAITAEGELYTWGRGNYGRLG---HGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLA 619

Query: 445 VTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQEMEE 483
           VT+ G+++ +GD +  +LG     GC  P    I+++++
Sbjct: 620 VTENGQVWSWGDGDYGKLGRGGSDGCKTPK--LIEKLQD 656



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 66/225 (29%), Positives = 100/225 (44%), Gaps = 8/225 (3%)

Query: 116  ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
            I  G  H+  L S+  +++ G    G LGHG  TTQ +    +       V+QV+     
Sbjct: 3104 IACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQ-LKPKMVKVLLGHRVIQVACGSRD 3162

Query: 175  AA--FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            A    +   G VF+ GD      G R  +     P+ +E L G    Q+  G  F+  LT
Sbjct: 3163 AQTLALTDEGLVFSWGDGDFGKLG-RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALT 3221

Query: 233  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
              G V T G   + +LGHG  +    P+ +  L     +V +A G  + LAVT +G VY+
Sbjct: 3222 KSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRG-KKIVHVAVGALHCLAVTDSGQVYA 3280

Query: 293  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
            +G   +   G+G      +P  +Q    +G  + RV+ G  H VA
Sbjct: 3281 WGDNDHGQQGNGTTTVNRKPTLVQGL--EGQKITRVACGSSHSVA 3323



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 50/167 (29%), Positives = 76/167 (45%), Gaps = 4/167 (2%)

Query: 118  TGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
            +G   TL L  + +V+S G    G LG G  +  C    +I+  +   VV+V      + 
Sbjct: 4152 SGDAQTLCLTDDDTVWSWGDGDYGKLGRG-GSDGCKVPMKIDSLTGLGVVKVECGSQFSV 4210

Query: 177  FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
             + +SG V+T G       GH   +  + RPR V+ L+G     +  G       T  G 
Sbjct: 4211 ALTKSGAVYTWGKGDYHRLGHGSDDH-VRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGE 4269

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
            V+T G N  GQLG G T     P+ +A L+    V ++A G ++ LA
Sbjct: 4270 VYTWGDNDEGQLGDGTTNAIQRPRLVAALQG-KKVNRVACGSAHTLA 4315



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 52/169 (30%), Positives = 76/169 (44%), Gaps = 8/169 (4%)

Query: 118 TGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
           +G   TL ++ N  V+S G    G LG G  +  C +   I       VV+V      + 
Sbjct: 612 SGDAQTLAVTENGQVWSWGDGDYGKLGRG-GSDGCKTPKLIEKLQDLDVVKVRCGSQFSI 670

Query: 177 FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
            + + GQV++ G   +   GH  T   +  P+L+E L+G     V AG      LT    
Sbjct: 671 ALTKDGQVYSWGKGDNQRLGH-GTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSE 729

Query: 237 VHTCGSNTHGQLGHGDTL--DRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
           VH+ GSN   Q  H DTL   +P P ++  L +   +V IA GP+   A
Sbjct: 730 VHSWGSNDQCQ--HFDTLRVTKPEPAALPGL-DTKHIVGIACGPAQSFA 775



 Score = 52.0 bits (123), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 36/147 (24%), Positives = 71/147 (48%), Gaps = 5/147 (3%)

Query: 332  DEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 391
            D+  ++   SG +Y WG  + G LG  +     +P P  +L +   VQ+   ++  F + 
Sbjct: 3942 DDWTLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVT 4001

Query: 392  DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRG 449
              G +Y     G+G+ G    G ++ V  P +L+S++   + +++  +G  H + ++  G
Sbjct: 4002 ADGKLYA---TGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 4058

Query: 450  RLFGFGDNERAQLGHDTLRGCLEPTEI 476
             ++ +G+ E  +LGH     C  P  I
Sbjct: 4059 EVYSWGEAEDGKLGHGNRSPCDRPRVI 4085



 Score = 45.4 bits (106), Expect = 0.069,   Method: Compositional matrix adjust.
 Identities = 41/139 (29%), Positives = 65/139 (46%), Gaps = 12/139 (8%)

Query: 344  VYTWGKGYCGALG--HGDEID-KTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 400
            V+ WG      LG   G +I   +  E LS+L     VQV    +  F +   G VY  G
Sbjct: 2961 VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALN---VVQVAGGSKSLFAVTVEGKVYACG 3017

Query: 401  WMGFGSLGFPDRGVSD-KVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDN 457
                G LG    G+S   V  PR + +L ++ V +++  +G  H   +T  G++F +G+ 
Sbjct: 3018 EATNGRLGL---GISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEG 3074

Query: 458  ERAQLGHDTLRGCLEPTEI 476
            +  +LGH +   C +P  I
Sbjct: 3075 DDGKLGHFSRMNCDKPRLI 3093


>gi|410223230|gb|JAA08834.1| hect domain and RLD 2 [Pan troglodytes]
 gi|410304312|gb|JAA30756.1| hect domain and RLD 2 [Pan troglodytes]
          Length = 4834

 Score =  129 bits (325), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 96/328 (29%), Positives = 158/328 (48%), Gaps = 16/328 (4%)

Query: 161  SAAHVVQVSASENHAAFVLQSGQVFTCGD--NSSFCCGHRDTNRPIFRPRLVEALKGVPC 218
            SA +VVQV+        V   G+V+ CG+  N     G      PI  PR + AL     
Sbjct: 2990 SALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPI--PRQITALSSYVV 3047

Query: 219  KQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA 276
            K+V   +G      LT+ G V + G    G+LGH   ++   P+ I  L+    +  IA 
Sbjct: 3048 KKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALK-TKRIRDIAC 3106

Query: 277  GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEH 334
            G S+  A+T +G +Y++G G    LGHG+   +L+P+ ++     G  V++V+ G  D  
Sbjct: 3107 GSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLL--GHRVIQVACGSRDAQ 3164

Query: 335  VVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 394
             +AL   G V++WG G  G LG G      +P+ +  L      Q+    + +  L  +G
Sbjct: 3165 TLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSG 3224

Query: 395  SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 454
             V+ +G   +  LG    G    V +P++++ LR   +  ++ G  H + VTD G+++ +
Sbjct: 3225 VVWTWGKGDYFRLG---HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAW 3281

Query: 455  GDNERAQLGHDTLRGCLEPTEIFIQEME 482
            GDN+  Q G+ T     +PT   +Q +E
Sbjct: 3282 GDNDHGQQGNGTTTVNRKPT--LVQGLE 3307



 Score =  125 bits (315), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 93/286 (32%), Positives = 140/286 (48%), Gaps = 10/286 (3%)

Query: 183  QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 242
            +VF  G N     G    ++ I  P   E L  +   QV  G      +T+ G V+ CG 
Sbjct: 2960 KVFVWGLNDKDQLGGLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGE 3018

Query: 243  NTHGQLGHG-DTLDRPTPKSIAPLEE-VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 300
             T+G+LG G  +   P P+ I  L   V   V + +G  +  A+T +G V+S+G G +  
Sbjct: 3019 ATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGK 3078

Query: 301  LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 360
            LGH  + +  +PR I+  + K I    ++ G  H  AL SSG +YTWG G  G LGHGD 
Sbjct: 3079 LGHFSRMNCDKPRLIEALKTKRIR--DIACGSSHSAALTSSGELYTWGLGEYGRLGHGDN 3136

Query: 361  IDKTLPEPLSSLKSHLAVQVC--ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKV 418
              +  P+ +  L  H  +QV   +R  +T  L D G V+ +G   FG LG   RG S+  
Sbjct: 3137 TTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLG---RGGSEGC 3193

Query: 419  LRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 464
              P+ ++ L    V QI  G   ++ +T  G ++ +G  +  +LGH
Sbjct: 3194 NIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGH 3239



 Score =  122 bits (305), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 86/280 (30%), Positives = 139/280 (49%), Gaps = 9/280 (3%)

Query: 166  VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 225
            V V++   H   +   G+V++ G+      GH + + P  RPR++E+L+G+    V AG 
Sbjct: 4042 VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRS-PCDRPRVIESLRGIEVVDVAAGG 4100

Query: 226  NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA--AGPSYMLA 283
              +  +T  G ++T G   +G+LGH D+ D+  PK +  L+    VV IA  +G +  L 
Sbjct: 4101 AHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQG-HRVVDIACGSGDAQTLC 4159

Query: 284  VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 343
            +T +  V+S+G G    LG G       P  I +    G+ VV+V  G +  VAL  SG 
Sbjct: 4160 LTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL--TGLGVVKVECGSQFSVALTKSGA 4217

Query: 344  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 403
            VYTWGKG    LGHG +     P  +  L+    + +           + G VY +G   
Sbjct: 4218 VYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDND 4277

Query: 404  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV 443
             G LG    G ++ + RPR++ +L+   V++++ G  HT+
Sbjct: 4278 EGQLG---DGTTNAIQRPRLVAALQGKKVNRVACGSAHTL 4314



 Score =  121 bits (303), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 82/269 (30%), Positives = 131/269 (48%), Gaps = 6/269 (2%)

Query: 207  PRLVEALKGVPCKQV--TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP 264
            P L+E+++ V  K+V   +G      L+  G V++ G    G+LGHG+      P+ I  
Sbjct: 4028 PTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIES 4087

Query: 265  LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH 324
            L  +  VV +AAG ++   VT  G +Y++G G    LGH +  D+L+P+ ++  +   + 
Sbjct: 4088 LRGI-EVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVV 4146

Query: 325  VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARK 384
             +   +GD   + L     V++WG G  G LG G      +P  + SL     V+V    
Sbjct: 4147 DIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGS 4206

Query: 385  RKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV 444
            + +  L  +G+VY +G   +  LG    G  D V RPR +  L+   V  I+TG  H V 
Sbjct: 4207 QFSVALTKSGAVYTWGKGDYHRLG---HGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 4263

Query: 445  VTDRGRLFGFGDNERAQLGHDTLRGCLEP 473
             T+ G ++ +GDN+  QLG  T      P
Sbjct: 4264 CTEDGEVYTWGDNDEGQLGDGTTNAIQRP 4292



 Score =  117 bits (294), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 92/311 (29%), Positives = 151/311 (48%), Gaps = 24/311 (7%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V Q++ +E     + ++G+V+T   NS       DT      P+LV+ L      ++ A 
Sbjct: 453 VTQIACAEKRFLILSRNGRVYTQAYNS-------DT----LAPQLVQGLASRNIVKIAAH 501

Query: 225 LNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGS-VVQIAAGPS 279
            +   +L +   G V++ G    G+LGHGDT+    PK I+    ++ G  VV IA G +
Sbjct: 502 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGST 561

Query: 280 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS--AGDEHVVA 337
           Y  A+T  G +Y++G G+   LGHG   DE  P  +     KG+ V+ V+  +GD   +A
Sbjct: 562 YSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGL--KGLKVIDVACGSGDAQTLA 619

Query: 338 LDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVY 397
           +  +G V++WG G  G LG G       P+ +  L+    V+V    + +  L   G VY
Sbjct: 620 VTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVY 679

Query: 398 GFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDN 457
            +G      LG    G  + V  P++L+ L+   V  ++ G  H + +T+   +  +G N
Sbjct: 680 SWGKGDNQRLG---HGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSN 736

Query: 458 ERAQLGHDTLR 468
           ++ Q   DTLR
Sbjct: 737 DQCQ-HFDTLR 746



 Score =  102 bits (253), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 84/265 (31%), Positives = 126/265 (47%), Gaps = 12/265 (4%)

Query: 96   FLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFT 155
             L+S++H    ++  A N   + G++   L S   V+S G +  G LGHG   + C    
Sbjct: 4030 LLESIQHV--FIKKVAVN---SGGKHCLALSSEGEVYSWGEAEDGKLGHG-NRSPCDRPR 4083

Query: 156  RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 215
             I       VV V+A   H+A V  +G ++T G       GH D+   + +P+LVEAL+G
Sbjct: 4084 VIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQL-KPKLVEALQG 4142

Query: 216  VPCKQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
                 +   +G   T  LT    V + G   +G+LG G +     P  I  L  +G VV+
Sbjct: 4143 HRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLG-VVK 4201

Query: 274  IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
            +  G  + +A+T +G VY++G G    LGHG      +PR +Q    +G  V+ ++ G  
Sbjct: 4202 VECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGL--QGKKVIAIATGSL 4259

Query: 334  HVVALDSSGYVYTWGKGYCGALGHG 358
            H V     G VYTWG    G LG G
Sbjct: 4260 HCVCCTEDGEVYTWGDNDEGQLGDG 4284



 Score =  101 bits (252), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 77/247 (31%), Positives = 125/247 (50%), Gaps = 12/247 (4%)

Query: 235  GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
            G ++  G N  GQLG   G  +  PTP +++A L  V    Q+  G   + AVT +G +Y
Sbjct: 3952 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPV----QLIGGEQTLFAVTADGKLY 4007

Query: 292  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 351
            + G G+   LG G       P  +++ +   I  V V++G +H +AL S G VY+WG+  
Sbjct: 4008 ATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAE 4067

Query: 352  CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 411
             G LGHG+      P  + SL+    V V A    +  +   G +Y +G   +G LG  D
Sbjct: 4068 DGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD 4127

Query: 412  RGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG 469
               S+  L+P+++++L+ H V  I+  +G   T+ +TD   ++ +GD +  +LG     G
Sbjct: 4128 ---SEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDG 4184

Query: 470  CLEPTEI 476
            C  P +I
Sbjct: 4185 CKVPMKI 4191



 Score = 99.8 bits (247), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 79/242 (32%), Positives = 114/242 (47%), Gaps = 7/242 (2%)

Query: 119  GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
            GR+ T L  +  VFS G    G LGH      C     I       +  ++   +H+A +
Sbjct: 3056 GRHATALTVDGKVFSWGEGDDGKLGHFSRMN-CDKPRLIEALKTKRIRDIACGSSHSAAL 3114

Query: 179  LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN--FTGFLTIRGH 236
              SG+++T G       GH D N    +P++V+ L G    QV  G     T  LT  G 
Sbjct: 3115 TSSGELYTWGLGEYGRLGHGD-NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 3173

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 296
            V + G    G+LG G +     P++I  L   G V QI  G  + LA+T +GVV+++G G
Sbjct: 3174 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTWGKG 3232

Query: 297  SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 356
              F LGHG      +P+ ++  R  G  +V V+ G  H +A+  SG VY WG    G  G
Sbjct: 3233 DYFRLGHGSDVHVRKPQVVEGLR--GKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQG 3290

Query: 357  HG 358
            +G
Sbjct: 3291 NG 3292



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 88/328 (26%), Positives = 149/328 (45%), Gaps = 26/328 (7%)

Query: 50  PQKFRSLVDLAASQLCALHSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVET 109
           P +   L +L  +Q+      +  +SRN ++    +   +     + +Q +  S +IV+ 
Sbjct: 442 PIQCEGLANLGVTQIACAEKRFLILSRNGRV--YTQAYNSDTLAPQLVQGLA-SRNIVKI 498

Query: 110 SAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSA 162
           +A     + G ++  L +   V+S G    G LGHG       P+     S  +    + 
Sbjct: 499 AAH----SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQ----AG 550

Query: 163 AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 222
            HVV ++    ++A +   G+++T G  +    GH  +      P LV  LKG+    V 
Sbjct: 551 KHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVA 609

Query: 223 AGLNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 280
            G      L +   G V + G   +G+LG G +    TPK I  L+++  VV++  G  +
Sbjct: 610 CGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL-DVVKVRCGSQF 668

Query: 281 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 340
            +A+T +G VYS+G G N  LGHG +     P+ ++    +G  V+ V+AG  H +AL  
Sbjct: 669 SIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGL--QGKKVIDVAAGSTHCLALTE 726

Query: 341 SGYVYTWGKGYCGALGHGDEIDKTLPEP 368
              V++WG        H D +  T PEP
Sbjct: 727 DSEVHSWGSN--DQCQHFDTLRVTKPEP 752



 Score = 76.3 bits (186), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 58/219 (26%), Positives = 100/219 (45%), Gaps = 21/219 (9%)

Query: 271 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 330
           V QIA      L ++ NG VY+    S          D L P+ +Q    + I  +   +
Sbjct: 453 VTQIACAEKRFLILSRNGRVYTQAYNS----------DTLAPQLVQGLASRNIVKIAAHS 502

Query: 331 GDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLA----VQVCARKRK 386
              H +AL ++G VY+WG G  G LGHGD +    P+ +S+     A    V +      
Sbjct: 503 DGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTY 562

Query: 387 TFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVV 444
           +  +   G +Y +G   +G LG    G S+    P ++  L+   V  ++  +G   T+ 
Sbjct: 563 SAAITAEGELYTWGRGNYGRLG---HGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLA 619

Query: 445 VTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQEMEE 483
           VT+ G+++ +GD +  +LG     GC  P    I+++++
Sbjct: 620 VTENGQVWSWGDGDYGKLGRGGSDGCKTPK--LIEKLQD 656



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 66/225 (29%), Positives = 100/225 (44%), Gaps = 8/225 (3%)

Query: 116  ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
            I  G  H+  L S+  +++ G    G LGHG  TTQ +    +       V+QV+     
Sbjct: 3104 IACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQ-LKPKMVKVLLGHRVIQVACGSRD 3162

Query: 175  AA--FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            A    +   G VF+ GD      G R  +     P+ +E L G    Q+  G  F+  LT
Sbjct: 3163 AQTLALTDEGLVFSWGDGDFGKLG-RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALT 3221

Query: 233  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
              G V T G   + +LGHG  +    P+ +  L     +V +A G  + LAVT +G VY+
Sbjct: 3222 KSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRG-KKIVHVAVGALHCLAVTDSGQVYA 3280

Query: 293  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
            +G   +   G+G      +P  +Q    +G  + RV+ G  H VA
Sbjct: 3281 WGDNDHGQQGNGTTTVNRKPTLVQGL--EGQKITRVACGSSHSVA 3323



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 50/167 (29%), Positives = 76/167 (45%), Gaps = 4/167 (2%)

Query: 118  TGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
            +G   TL L  + +V+S G    G LG G  +  C    +I+  +   VV+V      + 
Sbjct: 4152 SGDAQTLCLTDDDTVWSWGDGDYGKLGRG-GSDGCKVPMKIDSLTGLGVVKVECGSQFSV 4210

Query: 177  FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
             + +SG V+T G       GH   +  + RPR V+ L+G     +  G       T  G 
Sbjct: 4211 ALTKSGAVYTWGKGDYHRLGHGSDDH-VRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGE 4269

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
            V+T G N  GQLG G T     P+ +A L+    V ++A G ++ LA
Sbjct: 4270 VYTWGDNDEGQLGDGTTNAIQRPRLVAALQG-KKVNRVACGSAHTLA 4315



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 52/169 (30%), Positives = 76/169 (44%), Gaps = 8/169 (4%)

Query: 118 TGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
           +G   TL ++ N  V+S G    G LG G  +  C +   I       VV+V      + 
Sbjct: 612 SGDAQTLAVTENGQVWSWGDGDYGKLGRG-GSDGCKTPKLIEKLQDLDVVKVRCGSQFSI 670

Query: 177 FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
            + + GQV++ G   +   GH  T   +  P+L+E L+G     V AG      LT    
Sbjct: 671 ALTKDGQVYSWGKGDNQRLGH-GTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSE 729

Query: 237 VHTCGSNTHGQLGHGDTL--DRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
           VH+ GSN   Q  H DTL   +P P ++  L +   +V IA GP+   A
Sbjct: 730 VHSWGSNDQCQ--HFDTLRVTKPEPAALPGL-DTKHIVGIACGPAQSFA 775



 Score = 52.0 bits (123), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 36/147 (24%), Positives = 71/147 (48%), Gaps = 5/147 (3%)

Query: 332  DEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 391
            D+  ++   SG +Y WG  + G LG  +     +P P  +L +   VQ+   ++  F + 
Sbjct: 3942 DDWTLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVT 4001

Query: 392  DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRG 449
              G +Y     G+G+ G    G ++ V  P +L+S++   + +++  +G  H + ++  G
Sbjct: 4002 ADGKLYA---TGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 4058

Query: 450  RLFGFGDNERAQLGHDTLRGCLEPTEI 476
             ++ +G+ E  +LGH     C  P  I
Sbjct: 4059 EVYSWGEAEDGKLGHGNRSPCDRPRVI 4085



 Score = 45.4 bits (106), Expect = 0.069,   Method: Compositional matrix adjust.
 Identities = 41/139 (29%), Positives = 65/139 (46%), Gaps = 12/139 (8%)

Query: 344  VYTWGKGYCGALG--HGDEID-KTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 400
            V+ WG      LG   G +I   +  E LS+L     VQV    +  F +   G VY  G
Sbjct: 2961 VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALN---VVQVAGGSKSLFAVTVEGKVYACG 3017

Query: 401  WMGFGSLGFPDRGVSD-KVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDN 457
                G LG    G+S   V  PR + +L ++ V +++  +G  H   +T  G++F +G+ 
Sbjct: 3018 EATNGRLGL---GISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEG 3074

Query: 458  ERAQLGHDTLRGCLEPTEI 476
            +  +LGH +   C +P  I
Sbjct: 3075 DDGKLGHFSRMNCDKPRLI 3093


>gi|380817670|gb|AFE80709.1| E3 ubiquitin-protein ligase HERC2 [Macaca mulatta]
          Length = 4829

 Score =  129 bits (325), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 96/328 (29%), Positives = 158/328 (48%), Gaps = 16/328 (4%)

Query: 161  SAAHVVQVSASENHAAFVLQSGQVFTCGD--NSSFCCGHRDTNRPIFRPRLVEALKGVPC 218
            SA +VVQV+        V   G+V+ CG+  N     G      PI  PR + AL     
Sbjct: 2985 SALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPI--PRQITALSSYVV 3042

Query: 219  KQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA 276
            K+V   +G      LT+ G V + G    G+LGH   ++   P+ I  L+    +  IA 
Sbjct: 3043 KKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALK-TKRIRDIAC 3101

Query: 277  GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEH 334
            G S+  A+T +G +Y++G G    LGHG+   +L+P+ ++     G  V++V+ G  D  
Sbjct: 3102 GSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLL--GHRVIQVACGSRDAQ 3159

Query: 335  VVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 394
             +AL   G V++WG G  G LG G      +P+ +  L      Q+    + +  L  +G
Sbjct: 3160 TLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSG 3219

Query: 395  SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 454
             V+ +G   +  LG    G    V +P++++ LR   +  ++ G  H + VTD G+++ +
Sbjct: 3220 VVWTWGKGDYFRLG---HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAW 3276

Query: 455  GDNERAQLGHDTLRGCLEPTEIFIQEME 482
            GDN+  Q G+ T     +PT   +Q +E
Sbjct: 3277 GDNDHGQQGNGTTTVNRKPT--LVQGLE 3302



 Score =  125 bits (315), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 93/286 (32%), Positives = 140/286 (48%), Gaps = 10/286 (3%)

Query: 183  QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 242
            +VF  G N     G    ++ I  P   E L  +   QV  G      +T+ G V+ CG 
Sbjct: 2955 KVFVWGLNDKDQLGGLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGE 3013

Query: 243  NTHGQLGHG-DTLDRPTPKSIAPLEE-VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 300
             T+G+LG G  +   P P+ I  L   V   V + +G  +  A+T +G V+S+G G +  
Sbjct: 3014 ATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGK 3073

Query: 301  LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 360
            LGH  + +  +PR I+  + K I    ++ G  H  AL SSG +YTWG G  G LGHGD 
Sbjct: 3074 LGHFSRMNCDKPRLIEALKTKRIR--DIACGSSHSAALTSSGELYTWGLGEYGRLGHGDN 3131

Query: 361  IDKTLPEPLSSLKSHLAVQVC--ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKV 418
              +  P+ +  L  H  +QV   +R  +T  L D G V+ +G   FG LG   RG S+  
Sbjct: 3132 TTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLG---RGGSEGC 3188

Query: 419  LRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 464
              P+ ++ L    V QI  G   ++ +T  G ++ +G  +  +LGH
Sbjct: 3189 NIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGH 3234



 Score =  122 bits (305), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 86/280 (30%), Positives = 139/280 (49%), Gaps = 9/280 (3%)

Query: 166  VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 225
            V V++   H   +   G+V++ G+      GH + + P  RPR++E+L+G+    V AG 
Sbjct: 4037 VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRS-PCDRPRVIESLRGIEVVDVAAGG 4095

Query: 226  NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA--AGPSYMLA 283
              +  +T  G ++T G   +G+LGH D+ D+  PK +  L+    VV IA  +G +  L 
Sbjct: 4096 AHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQG-HRVVDIACGSGDAQTLC 4154

Query: 284  VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 343
            +T +  V+S+G G    LG G       P  I +    G+ VV+V  G +  VAL  SG 
Sbjct: 4155 LTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL--TGLGVVKVECGSQFSVALTKSGA 4212

Query: 344  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 403
            VYTWGKG    LGHG +     P  +  L+    + +           + G VY +G   
Sbjct: 4213 VYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDND 4272

Query: 404  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV 443
             G LG    G ++ + RPR++ +L+   V++++ G  HT+
Sbjct: 4273 EGQLG---DGTTNAIQRPRLVAALQGKKVNRVACGSAHTL 4309



 Score =  121 bits (303), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 82/269 (30%), Positives = 131/269 (48%), Gaps = 6/269 (2%)

Query: 207  PRLVEALKGVPCKQV--TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP 264
            P L+E+++ V  K+V   +G      L+  G V++ G    G+LGHG+      P+ I  
Sbjct: 4023 PTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIES 4082

Query: 265  LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH 324
            L  +  VV +AAG ++   VT  G +Y++G G    LGH +  D+L+P+ ++  +   + 
Sbjct: 4083 LRGI-EVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVV 4141

Query: 325  VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARK 384
             +   +GD   + L     V++WG G  G LG G      +P  + SL     V+V    
Sbjct: 4142 DIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGS 4201

Query: 385  RKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV 444
            + +  L  +G+VY +G   +  LG    G  D V RPR +  L+   V  I+TG  H V 
Sbjct: 4202 QFSVALTKSGAVYTWGKGDYHRLG---HGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 4258

Query: 445  VTDRGRLFGFGDNERAQLGHDTLRGCLEP 473
             T+ G ++ +GDN+  QLG  T      P
Sbjct: 4259 CTEDGEVYTWGDNDEGQLGDGTTNAIQRP 4287



 Score =  117 bits (294), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 92/311 (29%), Positives = 151/311 (48%), Gaps = 24/311 (7%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V Q++ +E     + ++G+V+T   NS       DT      P+LV+ L      ++ A 
Sbjct: 453 VTQIACAEKRFLILSRNGRVYTQAYNS-------DT----LAPQLVQGLASRNIVKIAAH 501

Query: 225 LNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGS-VVQIAAGPS 279
            +   +L +   G V++ G    G+LGHGDT+    PK I+    ++ G  VV IA G +
Sbjct: 502 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGST 561

Query: 280 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS--AGDEHVVA 337
           Y  A+T  G +Y++G G+   LGHG   DE  P  +     KG+ V+ V+  +GD   +A
Sbjct: 562 YSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGL--KGLKVIDVACGSGDAQTLA 619

Query: 338 LDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVY 397
           +  +G V++WG G  G LG G       P+ +  L+    V+V    + +  L   G VY
Sbjct: 620 VTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVY 679

Query: 398 GFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDN 457
            +G      LG    G  + V  P++L+ L+   V  ++ G  H + +T+   +  +G N
Sbjct: 680 SWGKGDNQRLG---HGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSN 736

Query: 458 ERAQLGHDTLR 468
           ++ Q   DTLR
Sbjct: 737 DQCQ-HFDTLR 746



 Score =  102 bits (253), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 84/265 (31%), Positives = 126/265 (47%), Gaps = 12/265 (4%)

Query: 96   FLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFT 155
             L+S++H    ++  A N   + G++   L S   V+S G +  G LGHG   + C    
Sbjct: 4025 LLESIQHV--FIKKVAVN---SGGKHCLALSSEGEVYSWGEAEDGKLGHG-NRSPCDRPR 4078

Query: 156  RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 215
             I       VV V+A   H+A V  +G ++T G       GH D+   + +P+LVEAL+G
Sbjct: 4079 VIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQL-KPKLVEALQG 4137

Query: 216  VPCKQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
                 +   +G   T  LT    V + G   +G+LG G +     P  I  L  +G VV+
Sbjct: 4138 HRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLG-VVK 4196

Query: 274  IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
            +  G  + +A+T +G VY++G G    LGHG      +PR +Q    +G  V+ ++ G  
Sbjct: 4197 VECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGL--QGKKVIAIATGSL 4254

Query: 334  HVVALDSSGYVYTWGKGYCGALGHG 358
            H V     G VYTWG    G LG G
Sbjct: 4255 HCVCCTEDGEVYTWGDNDEGQLGDG 4279



 Score =  101 bits (252), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 77/247 (31%), Positives = 125/247 (50%), Gaps = 12/247 (4%)

Query: 235  GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
            G ++  G N  GQLG   G  +  PTP +++A L  V    Q+  G   + AVT +G +Y
Sbjct: 3947 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPV----QLIGGEQTLFAVTADGKLY 4002

Query: 292  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 351
            + G G+   LG G       P  +++ +   I  V V++G +H +AL S G VY+WG+  
Sbjct: 4003 ATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAE 4062

Query: 352  CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 411
             G LGHG+      P  + SL+    V V A    +  +   G +Y +G   +G LG  D
Sbjct: 4063 DGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD 4122

Query: 412  RGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG 469
               S+  L+P+++++L+ H V  I+  +G   T+ +TD   ++ +GD +  +LG     G
Sbjct: 4123 ---SEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDG 4179

Query: 470  CLEPTEI 476
            C  P +I
Sbjct: 4180 CKVPMKI 4186



 Score = 99.8 bits (247), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 79/242 (32%), Positives = 114/242 (47%), Gaps = 7/242 (2%)

Query: 119  GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
            GR+ T L  +  VFS G    G LGH      C     I       +  ++   +H+A +
Sbjct: 3051 GRHATALTVDGKVFSWGEGDDGKLGHF-SRMNCDKPRLIEALKTKRIRDIACGSSHSAAL 3109

Query: 179  LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN--FTGFLTIRGH 236
              SG+++T G       GH D N    +P++V+ L G    QV  G     T  LT  G 
Sbjct: 3110 TSSGELYTWGLGEYGRLGHGD-NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 3168

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 296
            V + G    G+LG G +     P++I  L   G V QI  G  + LA+T +GVV+++G G
Sbjct: 3169 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTWGKG 3227

Query: 297  SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 356
              F LGHG      +P+ ++  R  G  +V V+ G  H +A+  SG VY WG    G  G
Sbjct: 3228 DYFRLGHGSDVHVRKPQVVEGLR--GKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQG 3285

Query: 357  HG 358
            +G
Sbjct: 3286 NG 3287



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 88/328 (26%), Positives = 149/328 (45%), Gaps = 26/328 (7%)

Query: 50  PQKFRSLVDLAASQLCALHSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVET 109
           P +   L +L  +Q+      +  +SRN ++    +   +     + +Q +  S +IV+ 
Sbjct: 442 PIQCEGLANLGVTQIACAEKRFLILSRNGRV--YTQAYNSDTLAPQLVQGLA-SRNIVKI 498

Query: 110 SAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSA 162
           +A     + G ++  L +   V+S G    G LGHG       P+     S  +    + 
Sbjct: 499 AAH----SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQ----AG 550

Query: 163 AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 222
            HVV ++    ++A +   G+++T G  +    GH  +      P LV  LKG+    V 
Sbjct: 551 KHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVA 609

Query: 223 AGLNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 280
            G      L +   G V + G   +G+LG G +    TPK I  L+++  VV++  G  +
Sbjct: 610 CGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL-DVVKVRCGSQF 668

Query: 281 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 340
            +A+T +G VYS+G G N  LGHG +     P+ ++    +G  V+ V+AG  H +AL  
Sbjct: 669 SIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGL--QGKKVIDVAAGSTHCLALTE 726

Query: 341 SGYVYTWGKGYCGALGHGDEIDKTLPEP 368
              V++WG        H D +  T PEP
Sbjct: 727 DSEVHSWGSN--DQCQHFDTLRVTKPEP 752



 Score = 76.6 bits (187), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 58/219 (26%), Positives = 100/219 (45%), Gaps = 21/219 (9%)

Query: 271 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 330
           V QIA      L ++ NG VY+    S          D L P+ +Q    + I  +   +
Sbjct: 453 VTQIACAEKRFLILSRNGRVYTQAYNS----------DTLAPQLVQGLASRNIVKIAAHS 502

Query: 331 GDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLA----VQVCARKRK 386
              H +AL ++G VY+WG G  G LGHGD +    P+ +S+     A    V +      
Sbjct: 503 DGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTY 562

Query: 387 TFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVV 444
           +  +   G +Y +G   +G LG    G S+    P ++  L+   V  ++  +G   T+ 
Sbjct: 563 SAAITAEGELYTWGRGNYGRLG---HGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLA 619

Query: 445 VTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQEMEE 483
           VT+ G+++ +GD +  +LG     GC  P    I+++++
Sbjct: 620 VTENGQVWSWGDGDYGKLGRGGSDGCKTPK--LIEKLQD 656



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 66/225 (29%), Positives = 100/225 (44%), Gaps = 8/225 (3%)

Query: 116  ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
            I  G  H+  L S+  +++ G    G LGHG  TTQ +    +       V+QV+     
Sbjct: 3099 IACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQ-LKPKMVKVLLGHRVIQVACGSRD 3157

Query: 175  AA--FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            A    +   G VF+ GD      G R  +     P+ +E L G    Q+  G  F+  LT
Sbjct: 3158 AQTLALTDEGLVFSWGDGDFGKLG-RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALT 3216

Query: 233  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
              G V T G   + +LGHG  +    P+ +  L     +V +A G  + LAVT +G VY+
Sbjct: 3217 KSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRG-KKIVHVAVGALHCLAVTDSGQVYA 3275

Query: 293  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
            +G   +   G+G      +P  +Q    +G  + RV+ G  H VA
Sbjct: 3276 WGDNDHGQQGNGTTTVNRKPTLVQGL--EGQKITRVACGSSHSVA 3318



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 50/167 (29%), Positives = 76/167 (45%), Gaps = 4/167 (2%)

Query: 118  TGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
            +G   TL L  + +V+S G    G LG G  +  C    +I+  +   VV+V      + 
Sbjct: 4147 SGDAQTLCLTDDDTVWSWGDGDYGKLGRG-GSDGCKVPMKIDSLTGLGVVKVECGSQFSV 4205

Query: 177  FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
             + +SG V+T G       GH   +  + RPR V+ L+G     +  G       T  G 
Sbjct: 4206 ALTKSGAVYTWGKGDYHRLGHGSDDH-VRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGE 4264

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
            V+T G N  GQLG G T     P+ +A L+    V ++A G ++ LA
Sbjct: 4265 VYTWGDNDEGQLGDGTTNAIQRPRLVAALQG-KKVNRVACGSAHTLA 4310



 Score = 53.5 bits (127), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 52/169 (30%), Positives = 76/169 (44%), Gaps = 8/169 (4%)

Query: 118 TGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
           +G   TL ++ N  V+S G    G LG G  +  C +   I       VV+V      + 
Sbjct: 612 SGDAQTLAVTENGQVWSWGDGDYGKLGRG-GSDGCKTPKLIEKLQDLDVVKVRCGSQFSI 670

Query: 177 FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
            + + GQV++ G   +   GH  T   +  P+L+E L+G     V AG      LT    
Sbjct: 671 ALTKDGQVYSWGKGDNQRLGH-GTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSE 729

Query: 237 VHTCGSNTHGQLGHGDTL--DRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
           VH+ GSN   Q  H DTL   +P P ++  L +   +V IA GP+   A
Sbjct: 730 VHSWGSNDQCQ--HFDTLRVTKPEPAALPGL-DTKHIVGIACGPAQSFA 775



 Score = 52.0 bits (123), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 36/147 (24%), Positives = 71/147 (48%), Gaps = 5/147 (3%)

Query: 332  DEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 391
            D+  ++   SG +Y WG  + G LG  +     +P P  +L +   VQ+   ++  F + 
Sbjct: 3937 DDWTLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVT 3996

Query: 392  DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRG 449
              G +Y     G+G+ G    G ++ V  P +L+S++   + +++  +G  H + ++  G
Sbjct: 3997 ADGKLYA---TGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 4053

Query: 450  RLFGFGDNERAQLGHDTLRGCLEPTEI 476
             ++ +G+ E  +LGH     C  P  I
Sbjct: 4054 EVYSWGEAEDGKLGHGNRSPCDRPRVI 4080



 Score = 45.4 bits (106), Expect = 0.068,   Method: Compositional matrix adjust.
 Identities = 45/161 (27%), Positives = 74/161 (45%), Gaps = 14/161 (8%)

Query: 322  GIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG--HGDEID-KTLPEPLSSLKSHLAV 378
            G  + + +AG E    + +   V+ WG      LG   G +I   +  E LS+L     V
Sbjct: 2936 GSLIRKKAAGLESAATIRTK--VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALN---VV 2990

Query: 379  QVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSD-KVLRPRILDSLRAHHVSQIS- 436
            QV    +  F +   G VY  G    G LG    G+S   V  PR + +L ++ V +++ 
Sbjct: 2991 QVAGGSKSLFAVTVEGKVYACGEATNGRLGL---GISSGTVPIPRQITALSSYVVKKVAV 3047

Query: 437  -TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 476
             +G  H   +T  G++F +G+ +  +LGH +   C +P  I
Sbjct: 3048 HSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLI 3088


>gi|402873774|ref|XP_003919728.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase HERC2
            [Papio anubis]
          Length = 4123

 Score =  129 bits (325), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 96/328 (29%), Positives = 158/328 (48%), Gaps = 16/328 (4%)

Query: 161  SAAHVVQVSASENHAAFVLQSGQVFTCGD--NSSFCCGHRDTNRPIFRPRLVEALKGVPC 218
            SA +VVQV+        V   G+V+ CG+  N     G      PI  PR + AL     
Sbjct: 2279 SALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPI--PRQITALSSYVV 2336

Query: 219  KQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA 276
            K+V   +G      LT+ G V + G    G+LGH   ++   P+ I  L+    +  IA 
Sbjct: 2337 KKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALK-TKRIRDIAC 2395

Query: 277  GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEH 334
            G S+  A+T +G +Y++G G    LGHG+   +L+P+ ++     G  V++V+ G  D  
Sbjct: 2396 GSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLL--GHRVIQVACGSRDAQ 2453

Query: 335  VVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 394
             +AL   G V++WG G  G LG G      +P+ +  L      Q+    + +  L  +G
Sbjct: 2454 TLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSG 2513

Query: 395  SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 454
             V+ +G   +  LG    G    V +P++++ LR   +  ++ G  H + VTD G+++ +
Sbjct: 2514 VVWTWGKGDYFRLG---HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAW 2570

Query: 455  GDNERAQLGHDTLRGCLEPTEIFIQEME 482
            GDN+  Q G+ T     +PT   +Q +E
Sbjct: 2571 GDNDHGQQGNGTTTVNRKPT--LVQGLE 2596



 Score =  125 bits (315), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 93/286 (32%), Positives = 140/286 (48%), Gaps = 10/286 (3%)

Query: 183  QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 242
            +VF  G N     G    ++ I  P   E L  +   QV  G      +T+ G V+ CG 
Sbjct: 2249 KVFVWGLNDKDQLGGLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGE 2307

Query: 243  NTHGQLGHG-DTLDRPTPKSIAPLEE-VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 300
             T+G+LG G  +   P P+ I  L   V   V + +G  +  A+T +G V+S+G G +  
Sbjct: 2308 ATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGK 2367

Query: 301  LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 360
            LGH  + +  +PR I+  + K I    ++ G  H  AL SSG +YTWG G  G LGHGD 
Sbjct: 2368 LGHFSRMNCDKPRLIEALKTKRIR--DIACGSSHSAALTSSGELYTWGLGEYGRLGHGDN 2425

Query: 361  IDKTLPEPLSSLKSHLAVQVC--ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKV 418
              +  P+ +  L  H  +QV   +R  +T  L D G V+ +G   FG LG   RG S+  
Sbjct: 2426 TTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLG---RGGSEGC 2482

Query: 419  LRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 464
              P+ ++ L    V QI  G   ++ +T  G ++ +G  +  +LGH
Sbjct: 2483 NIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGH 2528



 Score =  122 bits (305), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 86/280 (30%), Positives = 139/280 (49%), Gaps = 9/280 (3%)

Query: 166  VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 225
            V V++   H   +   G+V++ G+      GH + + P  RPR++E+L+G+    V AG 
Sbjct: 3331 VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRS-PCDRPRVIESLRGIEVVDVAAGG 3389

Query: 226  NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA--AGPSYMLA 283
              +  +T  G ++T G   +G+LGH D+ D+  PK +  L+    VV IA  +G +  L 
Sbjct: 3390 AHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQG-HRVVDIACGSGDAQTLC 3448

Query: 284  VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 343
            +T +  V+S+G G    LG G       P  I +    G+ VV+V  G +  VAL  SG 
Sbjct: 3449 LTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL--TGLGVVKVECGSQFSVALTKSGA 3506

Query: 344  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 403
            VYTWGKG    LGHG +     P  +  L+    + +           + G VY +G   
Sbjct: 3507 VYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDND 3566

Query: 404  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV 443
             G LG    G ++ + RPR++ +L+   V++++ G  HT+
Sbjct: 3567 EGQLG---DGTTNAIQRPRLVAALQGKKVNRVACGSAHTL 3603



 Score =  121 bits (303), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 82/269 (30%), Positives = 131/269 (48%), Gaps = 6/269 (2%)

Query: 207  PRLVEALKGVPCKQV--TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP 264
            P L+E+++ V  K+V   +G      L+  G V++ G    G+LGHG+      P+ I  
Sbjct: 3317 PTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIES 3376

Query: 265  LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH 324
            L  +  VV +AAG ++   VT  G +Y++G G    LGH +  D+L+P+ ++  +   + 
Sbjct: 3377 LRGI-EVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVV 3435

Query: 325  VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARK 384
             +   +GD   + L     V++WG G  G LG G      +P  + SL     V+V    
Sbjct: 3436 DIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGS 3495

Query: 385  RKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV 444
            + +  L  +G+VY +G   +  LG    G  D V RPR +  L+   V  I+TG  H V 
Sbjct: 3496 QFSVALTKSGAVYTWGKGDYHRLG---HGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 3552

Query: 445  VTDRGRLFGFGDNERAQLGHDTLRGCLEP 473
             T+ G ++ +GDN+  QLG  T      P
Sbjct: 3553 CTEDGEVYTWGDNDEGQLGDGTTNAIQRP 3581



 Score =  101 bits (252), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 84/265 (31%), Positives = 126/265 (47%), Gaps = 12/265 (4%)

Query: 96   FLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFT 155
             L+S++H    ++  A N   + G++   L S   V+S G +  G LGHG   + C    
Sbjct: 3319 LLESIQHV--FIKKVAVN---SGGKHCLALSSEGEVYSWGEAEDGKLGHG-NRSPCDRPR 3372

Query: 156  RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 215
             I       VV V+A   H+A V  +G ++T G       GH D+   + +P+LVEAL+G
Sbjct: 3373 VIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQL-KPKLVEALQG 3431

Query: 216  VPCKQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
                 +   +G   T  LT    V + G   +G+LG G +     P  I  L  +G VV+
Sbjct: 3432 HRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLG-VVK 3490

Query: 274  IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
            +  G  + +A+T +G VY++G G    LGHG      +PR +Q    +G  V+ ++ G  
Sbjct: 3491 VECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGL--QGKKVIAIATGSL 3548

Query: 334  HVVALDSSGYVYTWGKGYCGALGHG 358
            H V     G VYTWG    G LG G
Sbjct: 3549 HCVCCTEDGEVYTWGDNDEGQLGDG 3573



 Score =  101 bits (252), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 77/247 (31%), Positives = 125/247 (50%), Gaps = 12/247 (4%)

Query: 235  GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
            G ++  G N  GQLG   G  +  PTP +++A L  V    Q+  G   + AVT +G +Y
Sbjct: 3241 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPV----QLIGGEQTLFAVTADGKLY 3296

Query: 292  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 351
            + G G+   LG G       P  +++ +   I  V V++G +H +AL S G VY+WG+  
Sbjct: 3297 ATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAE 3356

Query: 352  CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 411
             G LGHG+      P  + SL+    V V A    +  +   G +Y +G   +G LG  D
Sbjct: 3357 DGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD 3416

Query: 412  RGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG 469
               S+  L+P+++++L+ H V  I+  +G   T+ +TD   ++ +GD +  +LG     G
Sbjct: 3417 ---SEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDG 3473

Query: 470  CLEPTEI 476
            C  P +I
Sbjct: 3474 CKVPMKI 3480



 Score = 99.8 bits (247), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 79/242 (32%), Positives = 114/242 (47%), Gaps = 7/242 (2%)

Query: 119  GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
            GR+ T L  +  VFS G    G LGH      C     I       +  ++   +H+A +
Sbjct: 2345 GRHATALTVDGKVFSWGEGDDGKLGHF-SRMNCDKPRLIEALKTKRIRDIACGSSHSAAL 2403

Query: 179  LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN--FTGFLTIRGH 236
              SG+++T G       GH D N    +P++V+ L G    QV  G     T  LT  G 
Sbjct: 2404 TSSGELYTWGLGEYGRLGHGD-NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 2462

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 296
            V + G    G+LG G +     P++I  L   G V QI  G  + LA+T +GVV+++G G
Sbjct: 2463 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTWGKG 2521

Query: 297  SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 356
              F LGHG      +P+ ++  R  G  +V V+ G  H +A+  SG VY WG    G  G
Sbjct: 2522 DYFRLGHGSDVHVRKPQVVEGLR--GKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQG 2579

Query: 357  HG 358
            +G
Sbjct: 2580 NG 2581



 Score = 66.6 bits (161), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 66/225 (29%), Positives = 100/225 (44%), Gaps = 8/225 (3%)

Query: 116  ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
            I  G  H+  L S+  +++ G    G LGHG  TTQ +    +       V+QV+     
Sbjct: 2393 IACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQ-LKPKMVKVLLGHRVIQVACGSRD 2451

Query: 175  AA--FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            A    +   G VF+ GD      G R  +     P+ +E L G    Q+  G  F+  LT
Sbjct: 2452 AQTLALTDEGLVFSWGDGDFGKLG-RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALT 2510

Query: 233  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
              G V T G   + +LGHG  +    P+ +  L     +V +A G  + LAVT +G VY+
Sbjct: 2511 KSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRG-KKIVHVAVGALHCLAVTDSGQVYA 2569

Query: 293  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
            +G   +   G+G      +P  +Q    +G  + RV+ G  H VA
Sbjct: 2570 WGDNDHGQQGNGTTTVNRKPTLVQGL--EGQKITRVACGSSHSVA 2612



 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 50/167 (29%), Positives = 76/167 (45%), Gaps = 4/167 (2%)

Query: 118  TGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
            +G   TL L  + +V+S G    G LG G  +  C    +I+  +   VV+V      + 
Sbjct: 3441 SGDAQTLCLTDDDTVWSWGDGDYGKLGRG-GSDGCKVPMKIDSLTGLGVVKVECGSQFSV 3499

Query: 177  FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
             + +SG V+T G       GH   +  + RPR V+ L+G     +  G       T  G 
Sbjct: 3500 ALTKSGAVYTWGKGDYHRLGHGSDDH-VRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGE 3558

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
            V+T G N  GQLG G T     P+ +A L+    V ++A G ++ LA
Sbjct: 3559 VYTWGDNDEGQLGDGTTNAIQRPRLVAALQG-KKVNRVACGSAHTLA 3604



 Score = 52.0 bits (123), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 36/147 (24%), Positives = 71/147 (48%), Gaps = 5/147 (3%)

Query: 332  DEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 391
            D+  ++   SG +Y WG  + G LG  +     +P P  +L +   VQ+   ++  F + 
Sbjct: 3231 DDWTLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVT 3290

Query: 392  DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRG 449
              G +Y     G+G+ G    G ++ V  P +L+S++   + +++  +G  H + ++  G
Sbjct: 3291 ADGKLYA---TGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 3347

Query: 450  RLFGFGDNERAQLGHDTLRGCLEPTEI 476
             ++ +G+ E  +LGH     C  P  I
Sbjct: 3348 EVYSWGEAEDGKLGHGNRSPCDRPRVI 3374



 Score = 45.4 bits (106), Expect = 0.062,   Method: Compositional matrix adjust.
 Identities = 41/139 (29%), Positives = 65/139 (46%), Gaps = 12/139 (8%)

Query: 344  VYTWGKGYCGALG--HGDEID-KTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 400
            V+ WG      LG   G +I   +  E LS+L     VQV    +  F +   G VY  G
Sbjct: 2250 VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALN---VVQVAGGSKSLFAVTVEGKVYACG 2306

Query: 401  WMGFGSLGFPDRGVSD-KVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDN 457
                G LG    G+S   V  PR + +L ++ V +++  +G  H   +T  G++F +G+ 
Sbjct: 2307 EATNGRLGL---GISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEG 2363

Query: 458  ERAQLGHDTLRGCLEPTEI 476
            +  +LGH +   C +P  I
Sbjct: 2364 DDGKLGHFSRMNCDKPRLI 2382


>gi|296203907|ref|XP_002806938.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
            HERC2-like, partial [Callithrix jacchus]
          Length = 4774

 Score =  129 bits (325), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 96/328 (29%), Positives = 158/328 (48%), Gaps = 16/328 (4%)

Query: 161  SAAHVVQVSASENHAAFVLQSGQVFTCGD--NSSFCCGHRDTNRPIFRPRLVEALKGVPC 218
            SA +VVQV+        V   G+V+ CG+  N     G      PI  PR + AL     
Sbjct: 2930 SALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPI--PRQITALSSYMV 2987

Query: 219  KQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA 276
            K+V   +G      LT+ G V + G    G+LGH   ++   P+ I  L+    +  IA 
Sbjct: 2988 KKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALK-TKRIRDIAC 3046

Query: 277  GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEH 334
            G S+  A+T +G +Y++G G    LGHG+   +L+P+ ++     G  V++V+ G  D  
Sbjct: 3047 GSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLL--GHRVIQVACGSRDAQ 3104

Query: 335  VVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 394
             +AL   G V++WG G  G LG G      +P+ +  L      Q+    + +  L  +G
Sbjct: 3105 TLALTDEGLVFSWGDGDFGKLGRGGSEGCNVPQNIERLNGQGVCQIECGAQFSLALTKSG 3164

Query: 395  SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 454
             V+ +G   +  LG    G    V +P++++ LR   +  ++ G  H + VTD G+++ +
Sbjct: 3165 VVWTWGKGDYFRLG---HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAW 3221

Query: 455  GDNERAQLGHDTLRGCLEPTEIFIQEME 482
            GDN+  Q G+ T     +PT   +Q +E
Sbjct: 3222 GDNDHGQQGNGTTTVNRKPT--LVQGLE 3247



 Score =  125 bits (313), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 92/286 (32%), Positives = 140/286 (48%), Gaps = 10/286 (3%)

Query: 183  QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 242
            +VF  G N     G    ++ I  P   E L  +   QV  G      +T+ G V+ CG 
Sbjct: 2900 KVFVWGLNDKDQLGGLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGE 2958

Query: 243  NTHGQLGHG-DTLDRPTPKSIAPLEE-VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 300
             T+G+LG G  +   P P+ I  L   +   V + +G  +  A+T +G V+S+G G +  
Sbjct: 2959 ATNGRLGLGISSGTVPIPRQITALSSYMVKKVAVHSGGRHATALTVDGKVFSWGEGDDGK 3018

Query: 301  LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 360
            LGH  + +  +PR I+  + K I    ++ G  H  AL SSG +YTWG G  G LGHGD 
Sbjct: 3019 LGHFSRMNCDKPRLIEALKTKRIR--DIACGSSHSAALTSSGELYTWGLGEYGRLGHGDN 3076

Query: 361  IDKTLPEPLSSLKSHLAVQVC--ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKV 418
              +  P+ +  L  H  +QV   +R  +T  L D G V+ +G   FG LG   RG S+  
Sbjct: 3077 TTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLG---RGGSEGC 3133

Query: 419  LRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 464
              P+ ++ L    V QI  G   ++ +T  G ++ +G  +  +LGH
Sbjct: 3134 NVPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGH 3179



 Score =  122 bits (307), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 87/280 (31%), Positives = 138/280 (49%), Gaps = 9/280 (3%)

Query: 166  VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 225
            V V++   H   +   G+V++ G+      GH  +  P  RPR++E+L+GV    V AG 
Sbjct: 3982 VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGH-GSRSPCDRPRVIESLRGVEVVDVAAGG 4040

Query: 226  NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA--AGPSYMLA 283
              +  +T  G ++T G   +G+LGH D+ D+  PK +  L+    VV IA  +G +  L 
Sbjct: 4041 AHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQG-HRVVDIACGSGDAQTLC 4099

Query: 284  VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 343
            +T +  V+S+G G    LG G       P  I +    G+ VV+V  G +  VAL  SG 
Sbjct: 4100 LTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL--TGLGVVKVECGSQFSVALTKSGA 4157

Query: 344  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 403
            VYTWGKG    LGHG +     P  +  L+    + +           + G VY +G   
Sbjct: 4158 VYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDND 4217

Query: 404  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV 443
             G LG    G ++ + RPR++ +L+   V++++ G  HT+
Sbjct: 4218 EGQLG---DGTTNAIQRPRLVAALQGKKVNRVACGSAHTL 4254



 Score =  121 bits (303), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 83/269 (30%), Positives = 130/269 (48%), Gaps = 6/269 (2%)

Query: 207  PRLVEALKGVPCKQV--TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP 264
            P L+E+++ V  K+V   +G      L+  G V++ G    G+LGHG       P+ I  
Sbjct: 3968 PTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGSRSPCDRPRVIES 4027

Query: 265  LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH 324
            L  V  VV +AAG ++   VT  G +Y++G G    LGH +  D+L+P+ ++  +   + 
Sbjct: 4028 LRGV-EVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVV 4086

Query: 325  VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARK 384
             +   +GD   + L     V++WG G  G LG G      +P  + SL     V+V    
Sbjct: 4087 DIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGS 4146

Query: 385  RKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV 444
            + +  L  +G+VY +G   +  LG    G  D V RPR +  L+   V  I+TG  H V 
Sbjct: 4147 QFSVALTKSGAVYTWGKGDYHRLG---HGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 4203

Query: 445  VTDRGRLFGFGDNERAQLGHDTLRGCLEP 473
             T+ G ++ +GDN+  QLG  T      P
Sbjct: 4204 CTEDGEVYTWGDNDEGQLGDGTTNAIQRP 4232



 Score =  102 bits (254), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 84/265 (31%), Positives = 126/265 (47%), Gaps = 12/265 (4%)

Query: 96   FLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFT 155
             L+S++H    ++  A N   + G++   L S   V+S G +  G LGHG  +  C    
Sbjct: 3970 LLESIQHV--FIKKVAVN---SGGKHCLALSSEGEVYSWGEAEDGKLGHGSRSP-CDRPR 4023

Query: 156  RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 215
             I       VV V+A   H+A V  +G ++T G       GH D+   + +P+LVEAL+G
Sbjct: 4024 VIESLRGVEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQL-KPKLVEALQG 4082

Query: 216  VPCKQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
                 +   +G   T  LT    V + G   +G+LG G +     P  I  L  +G VV+
Sbjct: 4083 HRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLG-VVK 4141

Query: 274  IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
            +  G  + +A+T +G VY++G G    LGHG      +PR +Q    +G  V+ ++ G  
Sbjct: 4142 VECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGL--QGKKVIAIATGSL 4199

Query: 334  HVVALDSSGYVYTWGKGYCGALGHG 358
            H V     G VYTWG    G LG G
Sbjct: 4200 HCVCCTEDGEVYTWGDNDEGQLGDG 4224



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 77/247 (31%), Positives = 124/247 (50%), Gaps = 12/247 (4%)

Query: 235  GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
            G ++  G N  GQLG   G  +  PTP +++A L  V    Q+  G   + AVT +G +Y
Sbjct: 3892 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPV----QLIGGEQTLFAVTADGKLY 3947

Query: 292  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 351
            + G G+   LG G       P  +++ +   I  V V++G +H +AL S G VY+WG+  
Sbjct: 3948 ATGYGAGGRLGIGGTESVSSPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAE 4007

Query: 352  CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 411
             G LGHG       P  + SL+    V V A    +  +   G +Y +G   +G LG  D
Sbjct: 4008 DGKLGHGSRSPCDRPRVIESLRGVEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD 4067

Query: 412  RGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG 469
               S+  L+P+++++L+ H V  I+  +G   T+ +TD   ++ +GD +  +LG     G
Sbjct: 4068 ---SEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDG 4124

Query: 470  CLEPTEI 476
            C  P +I
Sbjct: 4125 CKVPMKI 4131



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 79/242 (32%), Positives = 114/242 (47%), Gaps = 7/242 (2%)

Query: 119  GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
            GR+ T L  +  VFS G    G LGH      C     I       +  ++   +H+A +
Sbjct: 2996 GRHATALTVDGKVFSWGEGDDGKLGHFSRMN-CDKPRLIEALKTKRIRDIACGSSHSAAL 3054

Query: 179  LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN--FTGFLTIRGH 236
              SG+++T G       GH D N    +P++V+ L G    QV  G     T  LT  G 
Sbjct: 3055 TSSGELYTWGLGEYGRLGHGD-NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 3113

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 296
            V + G    G+LG G +     P++I  L   G V QI  G  + LA+T +GVV+++G G
Sbjct: 3114 VFSWGDGDFGKLGRGGSEGCNVPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTWGKG 3172

Query: 297  SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 356
              F LGHG      +P+ ++  R  G  +V V+ G  H +A+  SG VY WG    G  G
Sbjct: 3173 DYFRLGHGSDVHVRKPQVVEGLR--GKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQG 3230

Query: 357  HG 358
            +G
Sbjct: 3231 NG 3232



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 84/309 (27%), Positives = 137/309 (44%), Gaps = 20/309 (6%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V Q++ +E     + ++G V+T   NS       DT      P+LV+ L      ++ A 
Sbjct: 384 VTQIACAEKRFLILSRNGCVYTQAYNS-------DT----LAPQLVQGLASRNIVKIAAH 432

Query: 225 LNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGS-VVQIAAGPS 279
            +   +L +   G V++ G    G+LGHGDT+    PK I+    ++ G  VV IA G +
Sbjct: 433 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGST 492

Query: 280 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 339
           Y  A+T  G +Y++G G+   L HG          I    R+              +A  
Sbjct: 493 YSAAITAEGELYTWGRGNYXRLDHGRSAMNEILIMISGLDRQKFIYKSCGIRFAQTLAFY 552

Query: 340 SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGF 399
            +G V++WG G  G LG G       P+ +  L+    V+V    + +  L   G VY +
Sbjct: 553 ENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSW 612

Query: 400 GWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNER 459
           G      LG    G  + V  P++L+ L+   V  ++ G  H + +T+   +  +G N++
Sbjct: 613 GKGDNQRLG---HGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQ 669

Query: 460 AQLGHDTLR 468
            Q   DTLR
Sbjct: 670 CQ-HFDTLR 677



 Score = 86.3 bits (212), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 76/276 (27%), Positives = 125/276 (45%), Gaps = 25/276 (9%)

Query: 103 SSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHG-------PETTQCVSFT 155
           S +IV+ +A     + G ++  L +   V+S G    G LGHG       P+     S  
Sbjct: 423 SRNIVKIAAH----SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGK 478

Query: 156 RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEALK 214
           +    +  HVV ++    ++A +   G+++T G  +     H R     I    ++  L 
Sbjct: 479 Q----AGKHVVHIACGSTYSAAITAEGELYTWGRGNYXRLDHGRSAMNEIL--IMISGLD 532

Query: 215 GVPCKQVTAGLNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV 272
                  + G+ F   L     G V + G   +G+LG G +    TPK I  L+++  VV
Sbjct: 533 RQKFIYKSCGIRFAQTLAFYENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL-DVV 591

Query: 273 QIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGD 332
           ++  G  + +A+T +G VYS+G G N  LGHG +     P+ ++    +G  V+ V+AG 
Sbjct: 592 KVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGL--QGKKVIDVAAGS 649

Query: 333 EHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEP 368
            H +AL     V++WG        H D +  T PEP
Sbjct: 650 THCLALTEDSEVHSWGSN--DQCQHFDTLRVTKPEP 683



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 68/250 (27%), Positives = 116/250 (46%), Gaps = 16/250 (6%)

Query: 161 SAAHVVQVSA-SENHAAFVLQ-SGQVFT--CGDNSSFCCGHRDTNRPIFRPRLVEALKGV 216
           ++ ++V+++A S+ H    L  +G+V++  CGD      GH DT  P+  P+++ A  G 
Sbjct: 422 ASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRL--GHGDT-VPLEEPKVISAFSGK 478

Query: 217 PCKQ----VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV 272
              +    +  G  ++  +T  G ++T G   + +L HG +        I+ L+    + 
Sbjct: 479 QAGKHVVHIACGSTYSAAITAEGELYTWGRGNYXRLDHGRSAMNEILIMISGLDRQKFIY 538

Query: 273 QIAAGPSY--MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 330
           + + G  +   LA   NG V+S+G G    LG G       P+ I+    + + VV+V  
Sbjct: 539 K-SCGIRFAQTLAFYENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKL--QDLDVVKVRC 595

Query: 331 GDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVL 390
           G +  +AL   G VY+WGKG    LGHG E     P+ L  L+    + V A       L
Sbjct: 596 GSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLAL 655

Query: 391 VDTGSVYGFG 400
            +   V+ +G
Sbjct: 656 TEDSEVHSWG 665



 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 66/225 (29%), Positives = 100/225 (44%), Gaps = 8/225 (3%)

Query: 116  ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
            I  G  H+  L S+  +++ G    G LGHG  TTQ +    +       V+QV+     
Sbjct: 3044 IACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQ-LKPKMVKVLLGHRVIQVACGSRD 3102

Query: 175  AA--FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            A    +   G VF+ GD      G R  +     P+ +E L G    Q+  G  F+  LT
Sbjct: 3103 AQTLALTDEGLVFSWGDGDFGKLG-RGGSEGCNVPQNIERLNGQGVCQIECGAQFSLALT 3161

Query: 233  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
              G V T G   + +LGHG  +    P+ +  L     +V +A G  + LAVT +G VY+
Sbjct: 3162 KSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRG-KKIVHVAVGALHCLAVTDSGQVYA 3220

Query: 293  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
            +G   +   G+G      +P  +Q    +G  + RV+ G  H VA
Sbjct: 3221 WGDNDHGQQGNGTTTVNRKPTLVQGL--EGQKITRVACGSSHSVA 3263



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 50/167 (29%), Positives = 76/167 (45%), Gaps = 4/167 (2%)

Query: 118  TGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
            +G   TL L  + +V+S G    G LG G  +  C    +I+  +   VV+V      + 
Sbjct: 4092 SGDAQTLCLTDDDTVWSWGDGDYGKLGRG-GSDGCKVPMKIDSLTGLGVVKVECGSQFSV 4150

Query: 177  FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
             + +SG V+T G       GH   +  + RPR V+ L+G     +  G       T  G 
Sbjct: 4151 ALTKSGAVYTWGKGDYHRLGHGSDDH-VRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGE 4209

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
            V+T G N  GQLG G T     P+ +A L+    V ++A G ++ LA
Sbjct: 4210 VYTWGDNDEGQLGDGTTNAIQRPRLVAALQG-KKVNRVACGSAHTLA 4255



 Score = 52.8 bits (125), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 36/147 (24%), Positives = 72/147 (48%), Gaps = 5/147 (3%)

Query: 332  DEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 391
            D+  ++   SG +Y WG  + G LG  +     +P P  +L +   VQ+   ++  F + 
Sbjct: 3882 DDWTLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVT 3941

Query: 392  DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRG 449
              G +Y     G+G+ G    G ++ V  P +L+S++   + +++  +G  H + ++  G
Sbjct: 3942 ADGKLYA---TGYGAGGRLGIGGTESVSSPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 3998

Query: 450  RLFGFGDNERAQLGHDTLRGCLEPTEI 476
             ++ +G+ E  +LGH +   C  P  I
Sbjct: 3999 EVYSWGEAEDGKLGHGSRSPCDRPRVI 4025



 Score = 52.0 bits (123), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 49/158 (31%), Positives = 70/158 (44%), Gaps = 7/158 (4%)

Query: 128 NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTC 187
           N  V+S G    G LG G  +  C +   I       VV+V      +  + + GQV++ 
Sbjct: 554 NGQVWSWGDGDYGKLGRG-GSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSW 612

Query: 188 GDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQ 247
           G   +   GH  T   +  P+L+E L+G     V AG      LT    VH+ GSN   Q
Sbjct: 613 GKGDNQRLGH-GTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQ 671

Query: 248 LGHGDTL--DRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
             H DTL   +P P ++  L +   +V IA GP+   A
Sbjct: 672 --HFDTLRVTKPEPAALPGL-DTKHIVGIACGPAQSFA 706



 Score = 46.2 bits (108), Expect = 0.040,   Method: Compositional matrix adjust.
 Identities = 41/139 (29%), Positives = 65/139 (46%), Gaps = 12/139 (8%)

Query: 344  VYTWGKGYCGALG--HGDEID-KTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 400
            V+ WG      LG   G +I   +  E LS+L     VQV    +  F +   G VY  G
Sbjct: 2901 VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALN---VVQVAGGSKSLFAVTVEGKVYACG 2957

Query: 401  WMGFGSLGFPDRGVSD-KVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDN 457
                G LG    G+S   V  PR + +L ++ V +++  +G  H   +T  G++F +G+ 
Sbjct: 2958 EATNGRLGL---GISSGTVPIPRQITALSSYMVKKVAVHSGGRHATALTVDGKVFSWGEG 3014

Query: 458  ERAQLGHDTLRGCLEPTEI 476
            +  +LGH +   C +P  I
Sbjct: 3015 DDGKLGHFSRMNCDKPRLI 3033


>gi|410223232|gb|JAA08835.1| hect domain and RLD 2 [Pan troglodytes]
 gi|410304314|gb|JAA30757.1| hect domain and RLD 2 [Pan troglodytes]
          Length = 4834

 Score =  129 bits (325), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 96/328 (29%), Positives = 158/328 (48%), Gaps = 16/328 (4%)

Query: 161  SAAHVVQVSASENHAAFVLQSGQVFTCGD--NSSFCCGHRDTNRPIFRPRLVEALKGVPC 218
            SA +VVQV+        V   G+V+ CG+  N     G      PI  PR + AL     
Sbjct: 2990 SALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPI--PRQITALSSYVV 3047

Query: 219  KQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA 276
            K+V   +G      LT+ G V + G    G+LGH   ++   P+ I  L+    +  IA 
Sbjct: 3048 KKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALK-TKRIRDIAC 3106

Query: 277  GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEH 334
            G S+  A+T +G +Y++G G    LGHG+   +L+P+ ++     G  V++V+ G  D  
Sbjct: 3107 GSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLL--GHRVIQVACGSRDAQ 3164

Query: 335  VVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 394
             +AL   G V++WG G  G LG G      +P+ +  L      Q+    + +  L  +G
Sbjct: 3165 TLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSG 3224

Query: 395  SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 454
             V+ +G   +  LG    G    V +P++++ LR   +  ++ G  H + VTD G+++ +
Sbjct: 3225 VVWTWGKGDYFRLG---HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAW 3281

Query: 455  GDNERAQLGHDTLRGCLEPTEIFIQEME 482
            GDN+  Q G+ T     +PT   +Q +E
Sbjct: 3282 GDNDHGQQGNGTTTVNRKPT--LVQGLE 3307



 Score =  125 bits (315), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 93/286 (32%), Positives = 140/286 (48%), Gaps = 10/286 (3%)

Query: 183  QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 242
            +VF  G N     G    ++ I  P   E L  +   QV  G      +T+ G V+ CG 
Sbjct: 2960 KVFVWGLNDKDQLGGLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGE 3018

Query: 243  NTHGQLGHG-DTLDRPTPKSIAPLEE-VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 300
             T+G+LG G  +   P P+ I  L   V   V + +G  +  A+T +G V+S+G G +  
Sbjct: 3019 ATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGK 3078

Query: 301  LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 360
            LGH  + +  +PR I+  + K I    ++ G  H  AL SSG +YTWG G  G LGHGD 
Sbjct: 3079 LGHFSRMNCDKPRLIEALKTKRIR--DIACGSSHSAALTSSGELYTWGLGEYGRLGHGDN 3136

Query: 361  IDKTLPEPLSSLKSHLAVQVC--ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKV 418
              +  P+ +  L  H  +QV   +R  +T  L D G V+ +G   FG LG   RG S+  
Sbjct: 3137 TTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLG---RGGSEGC 3193

Query: 419  LRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 464
              P+ ++ L    V QI  G   ++ +T  G ++ +G  +  +LGH
Sbjct: 3194 NIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGH 3239



 Score =  122 bits (305), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 86/280 (30%), Positives = 139/280 (49%), Gaps = 9/280 (3%)

Query: 166  VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 225
            V V++   H   +   G+V++ G+      GH + + P  RPR++E+L+G+    V AG 
Sbjct: 4042 VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRS-PCDRPRVIESLRGIEVVDVAAGG 4100

Query: 226  NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA--AGPSYMLA 283
              +  +T  G ++T G   +G+LGH D+ D+  PK +  L+    VV IA  +G +  L 
Sbjct: 4101 AHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQG-HRVVDIACGSGDAQTLC 4159

Query: 284  VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 343
            +T +  V+S+G G    LG G       P  I +    G+ VV+V  G +  VAL  SG 
Sbjct: 4160 LTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL--TGLGVVKVECGSQFSVALTKSGA 4217

Query: 344  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 403
            VYTWGKG    LGHG +     P  +  L+    + +           + G VY +G   
Sbjct: 4218 VYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDND 4277

Query: 404  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV 443
             G LG    G ++ + RPR++ +L+   V++++ G  HT+
Sbjct: 4278 EGQLG---DGTTNAIQRPRLVAALQGKKVNRVACGSAHTL 4314



 Score =  121 bits (303), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 82/269 (30%), Positives = 131/269 (48%), Gaps = 6/269 (2%)

Query: 207  PRLVEALKGVPCKQV--TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP 264
            P L+E+++ V  K+V   +G      L+  G V++ G    G+LGHG+      P+ I  
Sbjct: 4028 PTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIES 4087

Query: 265  LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH 324
            L  +  VV +AAG ++   VT  G +Y++G G    LGH +  D+L+P+ ++  +   + 
Sbjct: 4088 LRGI-EVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVV 4146

Query: 325  VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARK 384
             +   +GD   + L     V++WG G  G LG G      +P  + SL     V+V    
Sbjct: 4147 DIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGS 4206

Query: 385  RKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV 444
            + +  L  +G+VY +G   +  LG    G  D V RPR +  L+   V  I+TG  H V 
Sbjct: 4207 QFSVALTKSGAVYTWGKGDYHRLG---HGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 4263

Query: 445  VTDRGRLFGFGDNERAQLGHDTLRGCLEP 473
             T+ G ++ +GDN+  QLG  T      P
Sbjct: 4264 CTEDGEVYTWGDNDEGQLGDGTTNAIQRP 4292



 Score =  117 bits (294), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 92/311 (29%), Positives = 151/311 (48%), Gaps = 24/311 (7%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V Q++ +E     + ++G+V+T   NS       DT      P+LV+ L      ++ A 
Sbjct: 453 VTQIACAEKRFLILSRNGRVYTQAYNS-------DT----LAPQLVQGLASRNIVKIAAH 501

Query: 225 LNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGS-VVQIAAGPS 279
            +   +L +   G V++ G    G+LGHGDT+    PK I+    ++ G  VV IA G +
Sbjct: 502 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGST 561

Query: 280 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS--AGDEHVVA 337
           Y  A+T  G +Y++G G+   LGHG   DE  P  +     KG+ V+ V+  +GD   +A
Sbjct: 562 YSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGL--KGLKVIDVACGSGDAQTLA 619

Query: 338 LDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVY 397
           +  +G V++WG G  G LG G       P+ +  L+    V+V    + +  L   G VY
Sbjct: 620 VTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVY 679

Query: 398 GFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDN 457
            +G      LG    G  + V  P++L+ L+   V  ++ G  H + +T+   +  +G N
Sbjct: 680 SWGKGDNQRLG---HGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSN 736

Query: 458 ERAQLGHDTLR 468
           ++ Q   DTLR
Sbjct: 737 DQCQ-HFDTLR 746



 Score =  102 bits (253), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 84/265 (31%), Positives = 126/265 (47%), Gaps = 12/265 (4%)

Query: 96   FLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFT 155
             L+S++H    ++  A N   + G++   L S   V+S G +  G LGHG   + C    
Sbjct: 4030 LLESIQHV--FIKKVAVN---SGGKHCLALSSEGEVYSWGEAEDGKLGHG-NRSPCDRPR 4083

Query: 156  RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 215
             I       VV V+A   H+A V  +G ++T G       GH D+   + +P+LVEAL+G
Sbjct: 4084 VIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQL-KPKLVEALQG 4142

Query: 216  VPCKQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
                 +   +G   T  LT    V + G   +G+LG G +     P  I  L  +G VV+
Sbjct: 4143 HRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLG-VVK 4201

Query: 274  IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
            +  G  + +A+T +G VY++G G    LGHG      +PR +Q    +G  V+ ++ G  
Sbjct: 4202 VECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGL--QGKKVIAIATGSL 4259

Query: 334  HVVALDSSGYVYTWGKGYCGALGHG 358
            H V     G VYTWG    G LG G
Sbjct: 4260 HCVCCTEDGEVYTWGDNDEGQLGDG 4284



 Score =  101 bits (251), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 77/247 (31%), Positives = 125/247 (50%), Gaps = 12/247 (4%)

Query: 235  GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
            G ++  G N  GQLG   G  +  PTP +++A L  V    Q+  G   + AVT +G +Y
Sbjct: 3952 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPV----QLIGGEQTLFAVTADGKLY 4007

Query: 292  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 351
            + G G+   LG G       P  +++ +   I  V V++G +H +AL S G VY+WG+  
Sbjct: 4008 ATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAE 4067

Query: 352  CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 411
             G LGHG+      P  + SL+    V V A    +  +   G +Y +G   +G LG  D
Sbjct: 4068 DGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD 4127

Query: 412  RGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG 469
               S+  L+P+++++L+ H V  I+  +G   T+ +TD   ++ +GD +  +LG     G
Sbjct: 4128 ---SEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDG 4184

Query: 470  CLEPTEI 476
            C  P +I
Sbjct: 4185 CKVPMKI 4191



 Score = 99.8 bits (247), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 79/242 (32%), Positives = 114/242 (47%), Gaps = 7/242 (2%)

Query: 119  GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
            GR+ T L  +  VFS G    G LGH      C     I       +  ++   +H+A +
Sbjct: 3056 GRHATALTVDGKVFSWGEGDDGKLGHF-SRMNCDKPRLIEALKTKRIRDIACGSSHSAAL 3114

Query: 179  LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN--FTGFLTIRGH 236
              SG+++T G       GH D N    +P++V+ L G    QV  G     T  LT  G 
Sbjct: 3115 TSSGELYTWGLGEYGRLGHGD-NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 3173

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 296
            V + G    G+LG G +     P++I  L   G V QI  G  + LA+T +GVV+++G G
Sbjct: 3174 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTWGKG 3232

Query: 297  SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 356
              F LGHG      +P+ ++  R  G  +V V+ G  H +A+  SG VY WG    G  G
Sbjct: 3233 DYFRLGHGSDVHVRKPQVVEGLR--GKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQG 3290

Query: 357  HG 358
            +G
Sbjct: 3291 NG 3292



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 88/328 (26%), Positives = 149/328 (45%), Gaps = 26/328 (7%)

Query: 50  PQKFRSLVDLAASQLCALHSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVET 109
           P +   L +L  +Q+      +  +SRN ++    +   +     + +Q +  S +IV+ 
Sbjct: 442 PIQCEGLANLGVTQIACAEKRFLILSRNGRV--YTQAYNSDTLAPQLVQGLA-SRNIVKI 498

Query: 110 SAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSA 162
           +A     + G ++  L +   V+S G    G LGHG       P+     S  +    + 
Sbjct: 499 AAH----SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQ----AG 550

Query: 163 AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 222
            HVV ++    ++A +   G+++T G  +    GH  +      P LV  LKG+    V 
Sbjct: 551 KHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVA 609

Query: 223 AGLNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 280
            G      L +   G V + G   +G+LG G +    TPK I  L+++  VV++  G  +
Sbjct: 610 CGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL-DVVKVRCGSQF 668

Query: 281 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 340
            +A+T +G VYS+G G N  LGHG +     P+ ++    +G  V+ V+AG  H +AL  
Sbjct: 669 SIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGL--QGKKVIDVAAGSTHCLALTE 726

Query: 341 SGYVYTWGKGYCGALGHGDEIDKTLPEP 368
              V++WG        H D +  T PEP
Sbjct: 727 DSEVHSWGSN--DQCQHFDTLRVTKPEP 752



 Score = 76.3 bits (186), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 58/219 (26%), Positives = 100/219 (45%), Gaps = 21/219 (9%)

Query: 271 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 330
           V QIA      L ++ NG VY+    S          D L P+ +Q    + I  +   +
Sbjct: 453 VTQIACAEKRFLILSRNGRVYTQAYNS----------DTLAPQLVQGLASRNIVKIAAHS 502

Query: 331 GDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLA----VQVCARKRK 386
              H +AL ++G VY+WG G  G LGHGD +    P+ +S+     A    V +      
Sbjct: 503 DGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTY 562

Query: 387 TFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVV 444
           +  +   G +Y +G   +G LG    G S+    P ++  L+   V  ++  +G   T+ 
Sbjct: 563 SAAITAEGELYTWGRGNYGRLG---HGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLA 619

Query: 445 VTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQEMEE 483
           VT+ G+++ +GD +  +LG     GC  P    I+++++
Sbjct: 620 VTENGQVWSWGDGDYGKLGRGGSDGCKTPK--LIEKLQD 656



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 66/225 (29%), Positives = 100/225 (44%), Gaps = 8/225 (3%)

Query: 116  ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
            I  G  H+  L S+  +++ G    G LGHG  TTQ +    +       V+QV+     
Sbjct: 3104 IACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQ-LKPKMVKVLLGHRVIQVACGSRD 3162

Query: 175  AA--FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            A    +   G VF+ GD      G R  +     P+ +E L G    Q+  G  F+  LT
Sbjct: 3163 AQTLALTDEGLVFSWGDGDFGKLG-RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALT 3221

Query: 233  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
              G V T G   + +LGHG  +    P+ +  L     +V +A G  + LAVT +G VY+
Sbjct: 3222 KSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRG-KKIVHVAVGALHCLAVTDSGQVYA 3280

Query: 293  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
            +G   +   G+G      +P  +Q    +G  + RV+ G  H VA
Sbjct: 3281 WGDNDHGQQGNGTTTVNRKPTLVQGL--EGQKITRVACGSSHSVA 3323



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 50/167 (29%), Positives = 76/167 (45%), Gaps = 4/167 (2%)

Query: 118  TGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
            +G   TL L  + +V+S G    G LG G  +  C    +I+  +   VV+V      + 
Sbjct: 4152 SGDAQTLCLTDDDTVWSWGDGDYGKLGRG-GSDGCKVPMKIDSLTGLGVVKVECGSQFSV 4210

Query: 177  FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
             + +SG V+T G       GH   +  + RPR V+ L+G     +  G       T  G 
Sbjct: 4211 ALTKSGAVYTWGKGDYHRLGHGSDDH-VRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGE 4269

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
            V+T G N  GQLG G T     P+ +A L+    V ++A G ++ LA
Sbjct: 4270 VYTWGDNDEGQLGDGTTNAIQRPRLVAALQG-KKVNRVACGSAHTLA 4315



 Score = 53.5 bits (127), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 52/169 (30%), Positives = 76/169 (44%), Gaps = 8/169 (4%)

Query: 118 TGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
           +G   TL ++ N  V+S G    G LG G  +  C +   I       VV+V      + 
Sbjct: 612 SGDAQTLAVTENGQVWSWGDGDYGKLGRG-GSDGCKTPKLIEKLQDLDVVKVRCGSQFSI 670

Query: 177 FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
            + + GQV++ G   +   GH  T   +  P+L+E L+G     V AG      LT    
Sbjct: 671 ALTKDGQVYSWGKGDNQRLGH-GTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSE 729

Query: 237 VHTCGSNTHGQLGHGDTL--DRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
           VH+ GSN   Q  H DTL   +P P ++  L +   +V IA GP+   A
Sbjct: 730 VHSWGSNDQCQ--HFDTLRVTKPEPAALPGL-DTKHIVGIACGPAQSFA 775



 Score = 52.0 bits (123), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 36/147 (24%), Positives = 71/147 (48%), Gaps = 5/147 (3%)

Query: 332  DEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 391
            D+  ++   SG +Y WG  + G LG  +     +P P  +L +   VQ+   ++  F + 
Sbjct: 3942 DDWTLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVT 4001

Query: 392  DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRG 449
              G +Y     G+G+ G    G ++ V  P +L+S++   + +++  +G  H + ++  G
Sbjct: 4002 ADGKLYA---TGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 4058

Query: 450  RLFGFGDNERAQLGHDTLRGCLEPTEI 476
             ++ +G+ E  +LGH     C  P  I
Sbjct: 4059 EVYSWGEAEDGKLGHGNRSPCDRPRVI 4085



 Score = 45.4 bits (106), Expect = 0.070,   Method: Compositional matrix adjust.
 Identities = 41/139 (29%), Positives = 65/139 (46%), Gaps = 12/139 (8%)

Query: 344  VYTWGKGYCGALG--HGDEID-KTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 400
            V+ WG      LG   G +I   +  E LS+L     VQV    +  F +   G VY  G
Sbjct: 2961 VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALN---VVQVAGGSKSLFAVTVEGKVYACG 3017

Query: 401  WMGFGSLGFPDRGVSD-KVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDN 457
                G LG    G+S   V  PR + +L ++ V +++  +G  H   +T  G++F +G+ 
Sbjct: 3018 EATNGRLGL---GISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEG 3074

Query: 458  ERAQLGHDTLRGCLEPTEI 476
            +  +LGH +   C +P  I
Sbjct: 3075 DDGKLGHFSRMNCDKPRLI 3093


>gi|403306428|ref|XP_003943737.1| PREDICTED: E3 ubiquitin-protein ligase HERC2 [Saimiri boliviensis
            boliviensis]
          Length = 4472

 Score =  129 bits (325), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 96/328 (29%), Positives = 158/328 (48%), Gaps = 16/328 (4%)

Query: 161  SAAHVVQVSASENHAAFVLQSGQVFTCGD--NSSFCCGHRDTNRPIFRPRLVEALKGVPC 218
            SA +VVQV+        V   G+V+ CG+  N     G      PI  PR + AL     
Sbjct: 2628 SALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGLSSGTVPI--PRQITALSSYMV 2685

Query: 219  KQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA 276
            K+V   +G      LT+ G V + G    G+LGH   ++   P+ I  L+    +  IA 
Sbjct: 2686 KKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALK-TKRIRDIAC 2744

Query: 277  GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEH 334
            G S+  A+T +G +Y++G G    LGHG+   +L+P+ ++     G  V++V+ G  D  
Sbjct: 2745 GSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLL--GHRVIQVACGSRDAQ 2802

Query: 335  VVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 394
             +AL   G V++WG G  G LG G      +P+ +  L      Q+    + +  L  +G
Sbjct: 2803 TLALTDEGLVFSWGDGDFGKLGRGGSEGCNVPQNIERLNGQGVCQIECGAQFSLALTKSG 2862

Query: 395  SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 454
             V+ +G   +  LG    G    V +P++++ LR   +  ++ G  H + VTD G+++ +
Sbjct: 2863 VVWTWGKGDYFRLG---HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAW 2919

Query: 455  GDNERAQLGHDTLRGCLEPTEIFIQEME 482
            GDN+  Q G+ T     +PT   +Q +E
Sbjct: 2920 GDNDHGQQGNGTTTVNRKPT--LVQGLE 2945



 Score =  124 bits (312), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 92/286 (32%), Positives = 140/286 (48%), Gaps = 10/286 (3%)

Query: 183  QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 242
            +VF  G N     G    ++ I  P   E L  +   QV  G      +T+ G V+ CG 
Sbjct: 2598 KVFVWGLNDKDQLGGLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGE 2656

Query: 243  NTHGQLGHG-DTLDRPTPKSIAPLEE-VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 300
             T+G+LG G  +   P P+ I  L   +   V + +G  +  A+T +G V+S+G G +  
Sbjct: 2657 ATNGRLGLGLSSGTVPIPRQITALSSYMVKKVAVHSGGRHATALTVDGKVFSWGEGDDGK 2716

Query: 301  LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 360
            LGH  + +  +PR I+  + K I    ++ G  H  AL SSG +YTWG G  G LGHGD 
Sbjct: 2717 LGHFSRMNCDKPRLIEALKTKRIR--DIACGSSHSAALTSSGELYTWGLGEYGRLGHGDN 2774

Query: 361  IDKTLPEPLSSLKSHLAVQVC--ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKV 418
              +  P+ +  L  H  +QV   +R  +T  L D G V+ +G   FG LG   RG S+  
Sbjct: 2775 TTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLG---RGGSEGC 2831

Query: 419  LRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 464
              P+ ++ L    V QI  G   ++ +T  G ++ +G  +  +LGH
Sbjct: 2832 NVPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGH 2877



 Score =  122 bits (305), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 86/280 (30%), Positives = 138/280 (49%), Gaps = 9/280 (3%)

Query: 166  VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 225
            V V++   H   +   G+V++ G+      GH  +  P  RPR++E+L+G+    V AG 
Sbjct: 3680 VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGH-GSRSPCDRPRVIESLRGIEVVDVAAGG 3738

Query: 226  NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA--AGPSYMLA 283
              +  +T  G ++T G   +G+LGH D+ D+  PK +  L+    VV IA  +G +  L 
Sbjct: 3739 AHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQG-HRVVDIACGSGDAQTLC 3797

Query: 284  VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 343
            +T +  V+S+G G    LG G       P  I +    G+ VV+V  G +  VAL  SG 
Sbjct: 3798 LTDDDTVWSWGDGDYGKLGRGGSDGCKVPTKIDSL--TGLGVVKVECGSQFSVALTKSGA 3855

Query: 344  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 403
            VYTWGKG    LGHG +     P  +  L+    + +           + G VY +G   
Sbjct: 3856 VYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDND 3915

Query: 404  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV 443
             G LG    G ++ + RPR++ +L+   V++++ G  HT+
Sbjct: 3916 EGQLG---DGTTNAIQRPRLVAALQGKKVNRVACGSAHTL 3952



 Score =  121 bits (303), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 82/269 (30%), Positives = 130/269 (48%), Gaps = 6/269 (2%)

Query: 207  PRLVEALKGVPCKQV--TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP 264
            P L+E+++ V  K+V   +G      L+  G V++ G    G+LGHG       P+ I  
Sbjct: 3666 PTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGSRSPCDRPRVIES 3725

Query: 265  LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH 324
            L  +  VV +AAG ++   VT  G +Y++G G    LGH +  D+L+P+ ++  +   + 
Sbjct: 3726 LRGI-EVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVV 3784

Query: 325  VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARK 384
             +   +GD   + L     V++WG G  G LG G      +P  + SL     V+V    
Sbjct: 3785 DIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPTKIDSLTGLGVVKVECGS 3844

Query: 385  RKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV 444
            + +  L  +G+VY +G   +  LG    G  D V RPR +  L+   V  I+TG  H V 
Sbjct: 3845 QFSVALTKSGAVYTWGKGDYHRLG---HGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 3901

Query: 445  VTDRGRLFGFGDNERAQLGHDTLRGCLEP 473
             T+ G ++ +GDN+  QLG  T      P
Sbjct: 3902 CTEDGEVYTWGDNDEGQLGDGTTNAIQRP 3930



 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 93/311 (29%), Positives = 152/311 (48%), Gaps = 24/311 (7%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V Q++ +E     + +SG+V+T   NS       DT      P+LV+ L      ++ A 
Sbjct: 142 VTQIACAEKRFLILSRSGRVYTQAYNS-------DT----LAPQLVQGLASRNIVKIAAH 190

Query: 225 LNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGS-VVQIAAGPS 279
            +   +L +   G V++ G    G+LGHGDT+    PK+I+    ++ G  VV IA G +
Sbjct: 191 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKAISAFSGKQAGKHVVHIACGST 250

Query: 280 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS--AGDEHVVA 337
           Y  A+T  G +Y++G G+   LGHG   DE  P  +     KG+ V+ V+  +GD   +A
Sbjct: 251 YSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGL--KGLKVIDVACGSGDAQTLA 308

Query: 338 LDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVY 397
           +  +G V++WG G  G LG G       P+ +  L+    V+V    + +  L   G VY
Sbjct: 309 VTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVY 368

Query: 398 GFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDN 457
            +G      LG    G  + V  P++L+ L+   V  ++ G  H + +T+   +  +G N
Sbjct: 369 SWGKGDNQRLG---HGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSN 425

Query: 458 ERAQLGHDTLR 468
           ++ Q   DTLR
Sbjct: 426 DQCQ-HFDTLR 435



 Score =  102 bits (255), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 78/247 (31%), Positives = 125/247 (50%), Gaps = 12/247 (4%)

Query: 235  GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
            G ++  G N  GQLG   G  +  PTP +++A L  V    Q+  G   + AVT +G +Y
Sbjct: 3590 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPV----QLIGGEQTLFAVTADGKLY 3645

Query: 292  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 351
            + G G+   LG G       P  +++ +   I  V V++G +H +AL S G VY+WG+  
Sbjct: 3646 ATGYGAGGRLGIGGTESVSSPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAE 3705

Query: 352  CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 411
             G LGHG       P  + SL+    V V A    +  +   G +Y +G   +G LG  D
Sbjct: 3706 DGKLGHGSRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD 3765

Query: 412  RGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG 469
               S+  L+P+++++L+ H V  I+  +G   T+ +TD   ++ +GD +  +LG     G
Sbjct: 3766 ---SEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDG 3822

Query: 470  CLEPTEI 476
            C  PT+I
Sbjct: 3823 CKVPTKI 3829



 Score =  102 bits (253), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 84/265 (31%), Positives = 126/265 (47%), Gaps = 12/265 (4%)

Query: 96   FLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFT 155
             L+S++H    ++  A N   + G++   L S   V+S G +  G LGHG  +  C    
Sbjct: 3668 LLESIQHV--FIKKVAVN---SGGKHCLALSSEGEVYSWGEAEDGKLGHGSRSP-CDRPR 3721

Query: 156  RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 215
             I       VV V+A   H+A V  +G ++T G       GH D+   + +P+LVEAL+G
Sbjct: 3722 VIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQL-KPKLVEALQG 3780

Query: 216  VPCKQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
                 +   +G   T  LT    V + G   +G+LG G +     P  I  L  +G VV+
Sbjct: 3781 HRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPTKIDSLTGLG-VVK 3839

Query: 274  IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
            +  G  + +A+T +G VY++G G    LGHG      +PR +Q    +G  V+ ++ G  
Sbjct: 3840 VECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGL--QGKKVIAIATGSL 3897

Query: 334  HVVALDSSGYVYTWGKGYCGALGHG 358
            H V     G VYTWG    G LG G
Sbjct: 3898 HCVCCTEDGEVYTWGDNDEGQLGDG 3922



 Score = 99.8 bits (247), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 79/242 (32%), Positives = 114/242 (47%), Gaps = 7/242 (2%)

Query: 119  GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
            GR+ T L  +  VFS G    G LGH      C     I       +  ++   +H+A +
Sbjct: 2694 GRHATALTVDGKVFSWGEGDDGKLGHF-SRMNCDKPRLIEALKTKRIRDIACGSSHSAAL 2752

Query: 179  LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN--FTGFLTIRGH 236
              SG+++T G       GH D N    +P++V+ L G    QV  G     T  LT  G 
Sbjct: 2753 TSSGELYTWGLGEYGRLGHGD-NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 2811

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 296
            V + G    G+LG G +     P++I  L   G V QI  G  + LA+T +GVV+++G G
Sbjct: 2812 VFSWGDGDFGKLGRGGSEGCNVPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTWGKG 2870

Query: 297  SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 356
              F LGHG      +P+ ++  R  G  +V V+ G  H +A+  SG VY WG    G  G
Sbjct: 2871 DYFRLGHGSDVHVRKPQVVEGLR--GKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQG 2928

Query: 357  HG 358
            +G
Sbjct: 2929 NG 2930



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 80/275 (29%), Positives = 128/275 (46%), Gaps = 23/275 (8%)

Query: 103 SSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHG-------PETTQCVSFT 155
           S +IV+ +A     + G ++  L +   V+S G    G LGHG       P+     S  
Sbjct: 181 SRNIVKIAAH----SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKAISAFSGK 236

Query: 156 RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 215
           +    +  HVV ++    ++A +   G+++T G  +    GH  +      P LV  LKG
Sbjct: 237 Q----AGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAI-PMLVAGLKG 291

Query: 216 VPCKQVTAGLNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
           +    V  G      L +   G V + G   +G+LG G +    TPK I  L+++  VV+
Sbjct: 292 LKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL-DVVK 350

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           +  G  + +A+T +G VYS+G G N  LGHG +     P+ ++    +G  V+ V+AG  
Sbjct: 351 VRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGL--QGKKVIDVAAGST 408

Query: 334 HVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEP 368
           H +AL     V++WG        H D +  T PEP
Sbjct: 409 HCLALTEDSEVHSWGSN--DQCQHFDTLRVTKPEP 441



 Score = 75.1 bits (183), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 57/219 (26%), Positives = 100/219 (45%), Gaps = 21/219 (9%)

Query: 271 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 330
           V QIA      L ++ +G VY+    S          D L P+ +Q    + I  +   +
Sbjct: 142 VTQIACAEKRFLILSRSGRVYTQAYNS----------DTLAPQLVQGLASRNIVKIAAHS 191

Query: 331 GDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLA----VQVCARKRK 386
              H +AL ++G VY+WG G  G LGHGD +    P+ +S+     A    V +      
Sbjct: 192 DGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKAISAFSGKQAGKHVVHIACGSTY 251

Query: 387 TFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVV 444
           +  +   G +Y +G   +G LG    G S+    P ++  L+   V  ++  +G   T+ 
Sbjct: 252 SAAITAEGELYTWGRGNYGRLG---HGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLA 308

Query: 445 VTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQEMEE 483
           VT+ G+++ +GD +  +LG     GC  P    I+++++
Sbjct: 309 VTENGQVWSWGDGDYGKLGRGGSDGCKTPK--LIEKLQD 345



 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 66/225 (29%), Positives = 100/225 (44%), Gaps = 8/225 (3%)

Query: 116  ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
            I  G  H+  L S+  +++ G    G LGHG  TTQ +    +       V+QV+     
Sbjct: 2742 IACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQ-LKPKMVKVLLGHRVIQVACGSRD 2800

Query: 175  AA--FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            A    +   G VF+ GD      G R  +     P+ +E L G    Q+  G  F+  LT
Sbjct: 2801 AQTLALTDEGLVFSWGDGDFGKLG-RGGSEGCNVPQNIERLNGQGVCQIECGAQFSLALT 2859

Query: 233  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
              G V T G   + +LGHG  +    P+ +  L     +V +A G  + LAVT +G VY+
Sbjct: 2860 KSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRG-KKIVHVAVGALHCLAVTDSGQVYA 2918

Query: 293  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
            +G   +   G+G      +P  +Q    +G  + RV+ G  H VA
Sbjct: 2919 WGDNDHGQQGNGTTTVNRKPTLVQGL--EGQKITRVACGSSHSVA 2961



 Score = 56.6 bits (135), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 51/167 (30%), Positives = 77/167 (46%), Gaps = 4/167 (2%)

Query: 118  TGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
            +G   TL L  + +V+S G    G LG G  +  C   T+I+  +   VV+V      + 
Sbjct: 3790 SGDAQTLCLTDDDTVWSWGDGDYGKLGRG-GSDGCKVPTKIDSLTGLGVVKVECGSQFSV 3848

Query: 177  FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
             + +SG V+T G       GH   +  + RPR V+ L+G     +  G       T  G 
Sbjct: 3849 ALTKSGAVYTWGKGDYHRLGHGSDDH-VRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGE 3907

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
            V+T G N  GQLG G T     P+ +A L+    V ++A G ++ LA
Sbjct: 3908 VYTWGDNDEGQLGDGTTNAIQRPRLVAALQG-KKVNRVACGSAHTLA 3953



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 52/169 (30%), Positives = 76/169 (44%), Gaps = 8/169 (4%)

Query: 118 TGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
           +G   TL ++ N  V+S G    G LG G  +  C +   I       VV+V      + 
Sbjct: 301 SGDAQTLAVTENGQVWSWGDGDYGKLGRG-GSDGCKTPKLIEKLQDLDVVKVRCGSQFSI 359

Query: 177 FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
            + + GQV++ G   +   GH  T   +  P+L+E L+G     V AG      LT    
Sbjct: 360 ALTKDGQVYSWGKGDNQRLGH-GTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSE 418

Query: 237 VHTCGSNTHGQLGHGDTL--DRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
           VH+ GSN   Q  H DTL   +P P ++  L +   +V IA GP+   A
Sbjct: 419 VHSWGSNDQCQ--HFDTLRVTKPEPAALPGL-DTKHIVGIACGPAQSFA 464



 Score = 52.8 bits (125), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 36/147 (24%), Positives = 72/147 (48%), Gaps = 5/147 (3%)

Query: 332  DEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 391
            D+  ++   SG +Y WG  + G LG  +     +P P  +L +   VQ+   ++  F + 
Sbjct: 3580 DDWTLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVT 3639

Query: 392  DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRG 449
              G +Y     G+G+ G    G ++ V  P +L+S++   + +++  +G  H + ++  G
Sbjct: 3640 ADGKLYA---TGYGAGGRLGIGGTESVSSPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 3696

Query: 450  RLFGFGDNERAQLGHDTLRGCLEPTEI 476
             ++ +G+ E  +LGH +   C  P  I
Sbjct: 3697 EVYSWGEAEDGKLGHGSRSPCDRPRVI 3723



 Score = 45.4 bits (106), Expect = 0.072,   Method: Compositional matrix adjust.
 Identities = 41/139 (29%), Positives = 65/139 (46%), Gaps = 12/139 (8%)

Query: 344  VYTWGKGYCGALG--HGDEID-KTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 400
            V+ WG      LG   G +I   +  E LS+L     VQV    +  F +   G VY  G
Sbjct: 2599 VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALN---VVQVAGGSKSLFAVTVEGKVYACG 2655

Query: 401  WMGFGSLGFPDRGVSD-KVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDN 457
                G LG    G+S   V  PR + +L ++ V +++  +G  H   +T  G++F +G+ 
Sbjct: 2656 EATNGRLGL---GLSSGTVPIPRQITALSSYMVKKVAVHSGGRHATALTVDGKVFSWGEG 2712

Query: 458  ERAQLGHDTLRGCLEPTEI 476
            +  +LGH +   C +P  I
Sbjct: 2713 DDGKLGHFSRMNCDKPRLI 2731


>gi|410265952|gb|JAA20942.1| hect domain and RLD 2 [Pan troglodytes]
          Length = 4834

 Score =  129 bits (325), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 96/328 (29%), Positives = 158/328 (48%), Gaps = 16/328 (4%)

Query: 161  SAAHVVQVSASENHAAFVLQSGQVFTCGD--NSSFCCGHRDTNRPIFRPRLVEALKGVPC 218
            SA +VVQV+        V   G+V+ CG+  N     G      PI  PR + AL     
Sbjct: 2990 SALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPI--PRQITALSSYVV 3047

Query: 219  KQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA 276
            K+V   +G      LT+ G V + G    G+LGH   ++   P+ I  L+    +  IA 
Sbjct: 3048 KKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALK-TKRIRDIAC 3106

Query: 277  GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEH 334
            G S+  A+T +G +Y++G G    LGHG+   +L+P+ ++     G  V++V+ G  D  
Sbjct: 3107 GSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLL--GHRVIQVACGSRDAQ 3164

Query: 335  VVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 394
             +AL   G V++WG G  G LG G      +P+ +  L      Q+    + +  L  +G
Sbjct: 3165 TLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSG 3224

Query: 395  SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 454
             V+ +G   +  LG    G    V +P++++ LR   +  ++ G  H + VTD G+++ +
Sbjct: 3225 VVWTWGKGDYFRLG---HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAW 3281

Query: 455  GDNERAQLGHDTLRGCLEPTEIFIQEME 482
            GDN+  Q G+ T     +PT   +Q +E
Sbjct: 3282 GDNDHGQQGNGTTTVNRKPT--LVQGLE 3307



 Score =  125 bits (315), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 93/286 (32%), Positives = 140/286 (48%), Gaps = 10/286 (3%)

Query: 183  QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 242
            +VF  G N     G    ++ I  P   E L  +   QV  G      +T+ G V+ CG 
Sbjct: 2960 KVFVWGLNDKDQLGGLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGE 3018

Query: 243  NTHGQLGHG-DTLDRPTPKSIAPLEE-VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 300
             T+G+LG G  +   P P+ I  L   V   V + +G  +  A+T +G V+S+G G +  
Sbjct: 3019 ATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGK 3078

Query: 301  LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 360
            LGH  + +  +PR I+  + K I    ++ G  H  AL SSG +YTWG G  G LGHGD 
Sbjct: 3079 LGHFSRMNCDKPRLIEALKTKRIR--DIACGSSHSAALTSSGELYTWGLGEYGRLGHGDN 3136

Query: 361  IDKTLPEPLSSLKSHLAVQVC--ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKV 418
              +  P+ +  L  H  +QV   +R  +T  L D G V+ +G   FG LG   RG S+  
Sbjct: 3137 TTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLG---RGGSEGC 3193

Query: 419  LRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 464
              P+ ++ L    V QI  G   ++ +T  G ++ +G  +  +LGH
Sbjct: 3194 NIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGH 3239



 Score =  122 bits (305), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 86/280 (30%), Positives = 139/280 (49%), Gaps = 9/280 (3%)

Query: 166  VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 225
            V V++   H   +   G+V++ G+      GH + + P  RPR++E+L+G+    V AG 
Sbjct: 4042 VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRS-PCDRPRVIESLRGIEVVDVAAGG 4100

Query: 226  NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA--AGPSYMLA 283
              +  +T  G ++T G   +G+LGH D+ D+  PK +  L+    VV IA  +G +  L 
Sbjct: 4101 AHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQG-HRVVDIACGSGDAQTLC 4159

Query: 284  VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 343
            +T +  V+S+G G    LG G       P  I +    G+ VV+V  G +  VAL  SG 
Sbjct: 4160 LTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL--TGLGVVKVECGSQFSVALTKSGA 4217

Query: 344  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 403
            VYTWGKG    LGHG +     P  +  L+    + +           + G VY +G   
Sbjct: 4218 VYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDND 4277

Query: 404  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV 443
             G LG    G ++ + RPR++ +L+   V++++ G  HT+
Sbjct: 4278 EGQLG---DGTTNAIQRPRLVAALQGKKVNRVACGSAHTL 4314



 Score =  121 bits (303), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 82/269 (30%), Positives = 131/269 (48%), Gaps = 6/269 (2%)

Query: 207  PRLVEALKGVPCKQV--TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP 264
            P L+E+++ V  K+V   +G      L+  G V++ G    G+LGHG+      P+ I  
Sbjct: 4028 PTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIES 4087

Query: 265  LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH 324
            L  +  VV +AAG ++   VT  G +Y++G G    LGH +  D+L+P+ ++  +   + 
Sbjct: 4088 LRGI-EVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVV 4146

Query: 325  VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARK 384
             +   +GD   + L     V++WG G  G LG G      +P  + SL     V+V    
Sbjct: 4147 DIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGS 4206

Query: 385  RKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV 444
            + +  L  +G+VY +G   +  LG    G  D V RPR +  L+   V  I+TG  H V 
Sbjct: 4207 QFSVALTKSGAVYTWGKGDYHRLG---HGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 4263

Query: 445  VTDRGRLFGFGDNERAQLGHDTLRGCLEP 473
             T+ G ++ +GDN+  QLG  T      P
Sbjct: 4264 CTEDGEVYTWGDNDEGQLGDGTTNAIQRP 4292



 Score =  117 bits (294), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 92/311 (29%), Positives = 151/311 (48%), Gaps = 24/311 (7%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V Q++ +E     + ++G+V+T   NS       DT      P+LV+ L      ++ A 
Sbjct: 453 VTQIACAEKRFLILSRNGRVYTQAYNS-------DT----LAPQLVQGLASRNIVKIAAH 501

Query: 225 LNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGS-VVQIAAGPS 279
            +   +L +   G V++ G    G+LGHGDT+    PK I+    ++ G  VV IA G +
Sbjct: 502 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGST 561

Query: 280 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS--AGDEHVVA 337
           Y  A+T  G +Y++G G+   LGHG   DE  P  +     KG+ V+ V+  +GD   +A
Sbjct: 562 YSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGL--KGLKVIDVACGSGDAQTLA 619

Query: 338 LDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVY 397
           +  +G V++WG G  G LG G       P+ +  L+    V+V    + +  L   G VY
Sbjct: 620 VTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVY 679

Query: 398 GFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDN 457
            +G      LG    G  + V  P++L+ L+   V  ++ G  H + +T+   +  +G N
Sbjct: 680 SWGKGDNQRLG---HGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSN 736

Query: 458 ERAQLGHDTLR 468
           ++ Q   DTLR
Sbjct: 737 DQCQ-HFDTLR 746



 Score =  102 bits (253), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 84/265 (31%), Positives = 126/265 (47%), Gaps = 12/265 (4%)

Query: 96   FLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFT 155
             L+S++H    ++  A N   + G++   L S   V+S G +  G LGHG   + C    
Sbjct: 4030 LLESIQHV--FIKKVAVN---SGGKHCLALSSEGEVYSWGEAEDGKLGHG-NRSPCDRPR 4083

Query: 156  RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 215
             I       VV V+A   H+A V  +G ++T G       GH D+   + +P+LVEAL+G
Sbjct: 4084 VIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQL-KPKLVEALQG 4142

Query: 216  VPCKQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
                 +   +G   T  LT    V + G   +G+LG G +     P  I  L  +G VV+
Sbjct: 4143 HRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLG-VVK 4201

Query: 274  IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
            +  G  + +A+T +G VY++G G    LGHG      +PR +Q    +G  V+ ++ G  
Sbjct: 4202 VECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGL--QGKKVIAIATGSL 4259

Query: 334  HVVALDSSGYVYTWGKGYCGALGHG 358
            H V     G VYTWG    G LG G
Sbjct: 4260 HCVCCTEDGEVYTWGDNDEGQLGDG 4284



 Score =  101 bits (251), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 77/247 (31%), Positives = 125/247 (50%), Gaps = 12/247 (4%)

Query: 235  GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
            G ++  G N  GQLG   G  +  PTP +++A L  V    Q+  G   + AVT +G +Y
Sbjct: 3952 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPV----QLIGGEQTLFAVTADGKLY 4007

Query: 292  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 351
            + G G+   LG G       P  +++ +   I  V V++G +H +AL S G VY+WG+  
Sbjct: 4008 ATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAE 4067

Query: 352  CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 411
             G LGHG+      P  + SL+    V V A    +  +   G +Y +G   +G LG  D
Sbjct: 4068 DGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD 4127

Query: 412  RGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG 469
               S+  L+P+++++L+ H V  I+  +G   T+ +TD   ++ +GD +  +LG     G
Sbjct: 4128 ---SEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDG 4184

Query: 470  CLEPTEI 476
            C  P +I
Sbjct: 4185 CKVPMKI 4191



 Score = 99.8 bits (247), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 79/242 (32%), Positives = 114/242 (47%), Gaps = 7/242 (2%)

Query: 119  GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
            GR+ T L  +  VFS G    G LGH      C     I       +  ++   +H+A +
Sbjct: 3056 GRHATALTVDGKVFSWGEGDDGKLGHFSRMN-CDKPRLIEALKTKRIRDIACGSSHSAAL 3114

Query: 179  LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN--FTGFLTIRGH 236
              SG+++T G       GH D N    +P++V+ L G    QV  G     T  LT  G 
Sbjct: 3115 TSSGELYTWGLGEYGRLGHGD-NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 3173

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 296
            V + G    G+LG G +     P++I  L   G V QI  G  + LA+T +GVV+++G G
Sbjct: 3174 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTWGKG 3232

Query: 297  SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 356
              F LGHG      +P+ ++  R  G  +V V+ G  H +A+  SG VY WG    G  G
Sbjct: 3233 DYFRLGHGSDVHVRKPQVVEGLR--GKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQG 3290

Query: 357  HG 358
            +G
Sbjct: 3291 NG 3292



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 88/328 (26%), Positives = 149/328 (45%), Gaps = 26/328 (7%)

Query: 50  PQKFRSLVDLAASQLCALHSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVET 109
           P +   L +L  +Q+      +  +SRN ++    +   +     + +Q +  S +IV+ 
Sbjct: 442 PIQCEGLANLGVTQIACAEKRFLILSRNGRV--YTQAYNSDTLAPQLVQGLA-SRNIVKI 498

Query: 110 SAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSA 162
           +A     + G ++  L +   V+S G    G LGHG       P+     S  +    + 
Sbjct: 499 AAH----SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQ----AG 550

Query: 163 AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 222
            HVV ++    ++A +   G+++T G  +    GH  +      P LV  LKG+    V 
Sbjct: 551 KHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVA 609

Query: 223 AGLNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 280
            G      L +   G V + G   +G+LG G +    TPK I  L+++  VV++  G  +
Sbjct: 610 CGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL-DVVKVRCGSQF 668

Query: 281 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 340
            +A+T +G VYS+G G N  LGHG +     P+ ++    +G  V+ V+AG  H +AL  
Sbjct: 669 SIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGL--QGKKVIDVAAGSTHCLALTE 726

Query: 341 SGYVYTWGKGYCGALGHGDEIDKTLPEP 368
              V++WG        H D +  T PEP
Sbjct: 727 DSEVHSWGSN--DQCQHFDTLRVTKPEP 752



 Score = 76.3 bits (186), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 58/219 (26%), Positives = 100/219 (45%), Gaps = 21/219 (9%)

Query: 271 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 330
           V QIA      L ++ NG VY+    S          D L P+ +Q    + I  +   +
Sbjct: 453 VTQIACAEKRFLILSRNGRVYTQAYNS----------DTLAPQLVQGLASRNIVKIAAHS 502

Query: 331 GDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLA----VQVCARKRK 386
              H +AL ++G VY+WG G  G LGHGD +    P+ +S+     A    V +      
Sbjct: 503 DGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTY 562

Query: 387 TFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVV 444
           +  +   G +Y +G   +G LG    G S+    P ++  L+   V  ++  +G   T+ 
Sbjct: 563 SAAITAEGELYTWGRGNYGRLG---HGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLA 619

Query: 445 VTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQEMEE 483
           VT+ G+++ +GD +  +LG     GC  P    I+++++
Sbjct: 620 VTENGQVWSWGDGDYGKLGRGGSDGCKTPK--LIEKLQD 656



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 66/225 (29%), Positives = 100/225 (44%), Gaps = 8/225 (3%)

Query: 116  ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
            I  G  H+  L S+  +++ G    G LGHG  TTQ +    +       V+QV+     
Sbjct: 3104 IACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQ-LKPKMVKVLLGHRVIQVACGSRD 3162

Query: 175  AA--FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            A    +   G VF+ GD      G R  +     P+ +E L G    Q+  G  F+  LT
Sbjct: 3163 AQTLALTDEGLVFSWGDGDFGKLG-RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALT 3221

Query: 233  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
              G V T G   + +LGHG  +    P+ +  L     +V +A G  + LAVT +G VY+
Sbjct: 3222 KSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRG-KKIVHVAVGALHCLAVTDSGQVYA 3280

Query: 293  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
            +G   +   G+G      +P  +Q    +G  + RV+ G  H VA
Sbjct: 3281 WGDNDHGQQGNGTTTVNRKPTLVQGL--EGQKITRVACGSSHSVA 3323



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 50/167 (29%), Positives = 76/167 (45%), Gaps = 4/167 (2%)

Query: 118  TGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
            +G   TL L  + +V+S G    G LG G  +  C    +I+  +   VV+V      + 
Sbjct: 4152 SGDAQTLCLTDDDTVWSWGDGDYGKLGRG-GSDGCKVPMKIDSLTGLGVVKVECGSQFSV 4210

Query: 177  FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
             + +SG V+T G       GH   +  + RPR V+ L+G     +  G       T  G 
Sbjct: 4211 ALTKSGAVYTWGKGDYHRLGHGSDDH-VRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGE 4269

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
            V+T G N  GQLG G T     P+ +A L+    V ++A G ++ LA
Sbjct: 4270 VYTWGDNDEGQLGDGTTNAIQRPRLVAALQG-KKVNRVACGSAHTLA 4315



 Score = 53.5 bits (127), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 52/169 (30%), Positives = 76/169 (44%), Gaps = 8/169 (4%)

Query: 118 TGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
           +G   TL ++ N  V+S G    G LG G  +  C +   I       VV+V      + 
Sbjct: 612 SGDAQTLAVTENGQVWSWGDGDYGKLGRG-GSDGCKTPKLIEKLQDLDVVKVRCGSQFSI 670

Query: 177 FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
            + + GQV++ G   +   GH  T   +  P+L+E L+G     V AG      LT    
Sbjct: 671 ALTKDGQVYSWGKGDNQRLGH-GTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSE 729

Query: 237 VHTCGSNTHGQLGHGDTL--DRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
           VH+ GSN   Q  H DTL   +P P ++  L +   +V IA GP+   A
Sbjct: 730 VHSWGSNDQCQ--HFDTLRVTKPEPAALPGL-DTKHIVGIACGPAQSFA 775



 Score = 52.0 bits (123), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 36/147 (24%), Positives = 71/147 (48%), Gaps = 5/147 (3%)

Query: 332  DEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 391
            D+  ++   SG +Y WG  + G LG  +     +P P  +L +   VQ+   ++  F + 
Sbjct: 3942 DDWTLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVT 4001

Query: 392  DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRG 449
              G +Y     G+G+ G    G ++ V  P +L+S++   + +++  +G  H + ++  G
Sbjct: 4002 ADGKLYA---TGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 4058

Query: 450  RLFGFGDNERAQLGHDTLRGCLEPTEI 476
             ++ +G+ E  +LGH     C  P  I
Sbjct: 4059 EVYSWGEAEDGKLGHGNRSPCDRPRVI 4085



 Score = 45.4 bits (106), Expect = 0.071,   Method: Compositional matrix adjust.
 Identities = 41/139 (29%), Positives = 65/139 (46%), Gaps = 12/139 (8%)

Query: 344  VYTWGKGYCGALG--HGDEID-KTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 400
            V+ WG      LG   G +I   +  E LS+L     VQV    +  F +   G VY  G
Sbjct: 2961 VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALN---VVQVAGGSKSLFAVTVEGKVYACG 3017

Query: 401  WMGFGSLGFPDRGVSD-KVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDN 457
                G LG    G+S   V  PR + +L ++ V +++  +G  H   +T  G++F +G+ 
Sbjct: 3018 EATNGRLGL---GISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEG 3074

Query: 458  ERAQLGHDTLRGCLEPTEI 476
            +  +LGH +   C +P  I
Sbjct: 3075 DDGKLGHFSRMNCDKPRLI 3093


>gi|410960764|ref|XP_003986957.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like isoform 2 [Felis
            catus]
          Length = 4844

 Score =  129 bits (325), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 96/328 (29%), Positives = 158/328 (48%), Gaps = 16/328 (4%)

Query: 161  SAAHVVQVSASENHAAFVLQSGQVFTCGD--NSSFCCGHRDTNRPIFRPRLVEALKGVPC 218
            SA +VVQV+        V   G+V+ CG+  N     G      PI  PR + AL     
Sbjct: 2998 SALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPI--PRQITALSSYVV 3055

Query: 219  KQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA 276
            K+V   +G      LT+ G V + G    G+LGH   ++   P+ I  L+    +  IA 
Sbjct: 3056 KKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALK-TKRIRDIAC 3114

Query: 277  GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEH 334
            G S+  A+T +G +Y++G G    LGHG+   +L+P+ ++     G  V++V+ G  D  
Sbjct: 3115 GSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLL--GHRVIQVACGSRDAQ 3172

Query: 335  VVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 394
             +AL   G V++WG G  G LG G      +P+ +  L      Q+    + +  L  +G
Sbjct: 3173 TLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSG 3232

Query: 395  SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 454
             V+ +G   +  LG    G    V +P++++ LR   +  ++ G  H + VTD G+++ +
Sbjct: 3233 VVWTWGKGDYFRLG---HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAW 3289

Query: 455  GDNERAQLGHDTLRGCLEPTEIFIQEME 482
            GDN+  Q G+ T     +PT   +Q +E
Sbjct: 3290 GDNDHGQQGNGTTTVNRKPT--LVQGLE 3315



 Score =  125 bits (315), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 93/286 (32%), Positives = 140/286 (48%), Gaps = 10/286 (3%)

Query: 183  QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 242
            +VF  G N     G    ++ I  P   E L  +   QV  G      +T+ G V+ CG 
Sbjct: 2968 KVFVWGLNDKDQLGGLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGE 3026

Query: 243  NTHGQLGHG-DTLDRPTPKSIAPLEE-VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 300
             T+G+LG G  +   P P+ I  L   V   V + +G  +  A+T +G V+S+G G +  
Sbjct: 3027 ATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGK 3086

Query: 301  LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 360
            LGH  + +  +PR I+  + K I    ++ G  H  AL SSG +YTWG G  G LGHGD 
Sbjct: 3087 LGHFSRMNCDKPRLIEALKTKRIR--DIACGSSHSAALTSSGELYTWGLGEYGRLGHGDN 3144

Query: 361  IDKTLPEPLSSLKSHLAVQVC--ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKV 418
              +  P+ +  L  H  +QV   +R  +T  L D G V+ +G   FG LG   RG S+  
Sbjct: 3145 TTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLG---RGGSEGC 3201

Query: 419  LRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 464
              P+ ++ L    V QI  G   ++ +T  G ++ +G  +  +LGH
Sbjct: 3202 NIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGH 3247



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 87/271 (32%), Positives = 135/271 (49%), Gaps = 10/271 (3%)

Query: 207  PRLVEALKGVPCKQV--TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP 264
            P L+E+++ V  K+V   +G      L+  G V++ G    G+LGHG+      P+ I  
Sbjct: 4038 PTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIES 4097

Query: 265  LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH 324
            L  +  VV +AAG ++   VT  G +Y++G G    LGH +  D+L+P+ ++    +G H
Sbjct: 4098 LRGI-EVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEAL--QGHH 4154

Query: 325  VVRVS--AGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCA 382
            VV V+  +GD   + L     V++WG G  G LG G      +P  + SL     V+V  
Sbjct: 4155 VVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVEC 4214

Query: 383  RKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHT 442
              + +  L  +G+VY +G   +  LG    G  D V RPR +  L+   V  I+TG  H 
Sbjct: 4215 GSQFSVALTKSGAVYTWGKGDYHRLG---HGSDDHVRRPRQVQGLQGKKVIAIATGSLHC 4271

Query: 443  VVVTDRGRLFGFGDNERAQLGHDTLRGCLEP 473
            V  T+ G ++ +GDN+  QLG  T      P
Sbjct: 4272 VCCTEDGEVYTWGDNDEGQLGDGTTNAIQRP 4302



 Score =  121 bits (303), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 85/280 (30%), Positives = 139/280 (49%), Gaps = 9/280 (3%)

Query: 166  VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 225
            V V++   H   +   G+V++ G+      GH + + P  RPR++E+L+G+    V AG 
Sbjct: 4052 VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRS-PCDRPRVIESLRGIEVVDVAAGG 4110

Query: 226  NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA--AGPSYMLA 283
              +  +T  G ++T G   +G+LGH D+ D+  PK +  L+    VV +A  +G +  L 
Sbjct: 4111 AHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQG-HHVVDVACGSGDAQTLC 4169

Query: 284  VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 343
            +T +  V+S+G G    LG G       P  I +    G+ VV+V  G +  VAL  SG 
Sbjct: 4170 LTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL--TGLGVVKVECGSQFSVALTKSGA 4227

Query: 344  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 403
            VYTWGKG    LGHG +     P  +  L+    + +           + G VY +G   
Sbjct: 4228 VYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDND 4287

Query: 404  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV 443
             G LG    G ++ + RPR++ +L+   V++++ G  HT+
Sbjct: 4288 EGQLG---DGTTNAIQRPRLVAALQGKKVNRVACGSAHTL 4324



 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 92/311 (29%), Positives = 151/311 (48%), Gaps = 24/311 (7%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V Q++ +E     + ++G+V+T   NS       DT      P+LV+ L      ++ A 
Sbjct: 454 VTQIACAEKRFLILSRNGRVYTQAYNS-------DT----LAPQLVQGLASRNIVKIAAH 502

Query: 225 LNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGS-VVQIAAGPS 279
            +   +L +   G V++ G    G+LGHGDT+    PK I+    ++ G  VV IA G +
Sbjct: 503 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGST 562

Query: 280 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS--AGDEHVVA 337
           Y  A+T  G +Y++G G+   LGHG   DE  P  +     KG+ V+ V+  +GD   +A
Sbjct: 563 YSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPVLVAGL--KGLKVIDVACGSGDAQTLA 620

Query: 338 LDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVY 397
           +  +G V++WG G  G LG G       P+ +  L+    V+V    + +  L   G VY
Sbjct: 621 VTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVY 680

Query: 398 GFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDN 457
            +G      LG    G  + V  P++L+ L+   V  ++ G  H + +T+   +  +G N
Sbjct: 681 SWGKGDNQRLG---HGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSN 737

Query: 458 ERAQLGHDTLR 468
           ++ Q   DTLR
Sbjct: 738 DQCQ-HFDTLR 747



 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 77/247 (31%), Positives = 126/247 (51%), Gaps = 12/247 (4%)

Query: 235  GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
            G ++  G N  GQLG   G  +  PTP +++A L  V    Q+  G   + AVT +G +Y
Sbjct: 3962 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPV----QLIGGEQTLFAVTADGKLY 4017

Query: 292  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 351
            + G G+   LG G       P  +++ +   I  V V++G +H +AL S G VY+WG+  
Sbjct: 4018 ATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAE 4077

Query: 352  CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 411
             G LGHG+      P  + SL+    V V A    +  +   G +Y +G   +G LG  D
Sbjct: 4078 DGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD 4137

Query: 412  RGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG 469
               S+  L+P+++++L+ HHV  ++  +G   T+ +TD   ++ +GD +  +LG     G
Sbjct: 4138 ---SEDQLKPKLVEALQGHHVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDG 4194

Query: 470  CLEPTEI 476
            C  P +I
Sbjct: 4195 CKVPMKI 4201



 Score =  102 bits (254), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 85/265 (32%), Positives = 126/265 (47%), Gaps = 12/265 (4%)

Query: 96   FLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFT 155
             L+S++H    ++  A N   + G++   L S   V+S G +  G LGHG   + C    
Sbjct: 4040 LLESIQHV--FIKKVAVN---SGGKHCLALSSEGEVYSWGEAEDGKLGHG-NRSPCDRPR 4093

Query: 156  RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 215
             I       VV V+A   H+A V  +G ++T G       GH D+   + +P+LVEAL+G
Sbjct: 4094 VIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQL-KPKLVEALQG 4152

Query: 216  VPCKQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
                 V   +G   T  LT    V + G   +G+LG G +     P  I  L  +G VV+
Sbjct: 4153 HHVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLG-VVK 4211

Query: 274  IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
            +  G  + +A+T +G VY++G G    LGHG      +PR +Q    +G  V+ ++ G  
Sbjct: 4212 VECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGL--QGKKVIAIATGSL 4269

Query: 334  HVVALDSSGYVYTWGKGYCGALGHG 358
            H V     G VYTWG    G LG G
Sbjct: 4270 HCVCCTEDGEVYTWGDNDEGQLGDG 4294



 Score = 98.6 bits (244), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 78/242 (32%), Positives = 114/242 (47%), Gaps = 7/242 (2%)

Query: 119  GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
            GR+ T L  +  VFS G    G LGH      C     I       +  ++   +H+A +
Sbjct: 3064 GRHATALTVDGKVFSWGEGDDGKLGHF-SRMNCDKPRLIEALKTKRIRDIACGSSHSAAL 3122

Query: 179  LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN--FTGFLTIRGH 236
              SG+++T G       GH D N    +P++V+ L G    QV  G     T  LT  G 
Sbjct: 3123 TSSGELYTWGLGEYGRLGHGD-NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 3181

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 296
            V + G    G+LG G +     P++I  L   G V QI  G  + LA+T +GVV+++G G
Sbjct: 3182 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTWGKG 3240

Query: 297  SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 356
              F LGHG      +P+ ++  R  G  +V V+ G  H +A+  +G VY WG    G  G
Sbjct: 3241 DYFRLGHGSDVHVRKPQVVEGLR--GKKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQG 3298

Query: 357  HG 358
            +G
Sbjct: 3299 NG 3300



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 88/328 (26%), Positives = 149/328 (45%), Gaps = 26/328 (7%)

Query: 50  PQKFRSLVDLAASQLCALHSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVET 109
           P +   L +L  +Q+      +  +SRN ++    +   +     + +Q +  S +IV+ 
Sbjct: 443 PIQCEGLANLGVTQIACAEKRFLILSRNGRV--YTQAYNSDTLAPQLVQGLA-SRNIVKI 499

Query: 110 SAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSA 162
           +A     + G ++  L +   V+S G    G LGHG       P+     S  +    + 
Sbjct: 500 AAH----SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQ----AG 551

Query: 163 AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 222
            HVV ++    ++A +   G+++T G  +    GH  +      P LV  LKG+    V 
Sbjct: 552 KHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAI-PVLVAGLKGLKVIDVA 610

Query: 223 AGLNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 280
            G      L +   G V + G   +G+LG G +    TPK I  L+++  VV++  G  +
Sbjct: 611 CGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL-DVVKVRCGSQF 669

Query: 281 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 340
            +A+T +G VYS+G G N  LGHG +     P+ ++    +G  V+ V+AG  H +AL  
Sbjct: 670 SIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGL--QGKKVIDVAAGSTHCLALTE 727

Query: 341 SGYVYTWGKGYCGALGHGDEIDKTLPEP 368
              V++WG        H D +  T PEP
Sbjct: 728 DSEVHSWGSN--DQCQHFDTLRVTKPEP 753



 Score = 75.9 bits (185), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 58/219 (26%), Positives = 100/219 (45%), Gaps = 21/219 (9%)

Query: 271 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 330
           V QIA      L ++ NG VY+    S          D L P+ +Q    + I  +   +
Sbjct: 454 VTQIACAEKRFLILSRNGRVYTQAYNS----------DTLAPQLVQGLASRNIVKIAAHS 503

Query: 331 GDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLA----VQVCARKRK 386
              H +AL ++G VY+WG G  G LGHGD +    P+ +S+     A    V +      
Sbjct: 504 DGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTY 563

Query: 387 TFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVV 444
           +  +   G +Y +G   +G LG    G S+    P ++  L+   V  ++  +G   T+ 
Sbjct: 564 SAAITAEGELYTWGRGNYGRLG---HGSSEDEAIPVLVAGLKGLKVIDVACGSGDAQTLA 620

Query: 445 VTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQEMEE 483
           VT+ G+++ +GD +  +LG     GC  P    I+++++
Sbjct: 621 VTENGQVWSWGDGDYGKLGRGGSDGCKTPK--LIEKLQD 657



 Score = 66.2 bits (160), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 66/225 (29%), Positives = 99/225 (44%), Gaps = 8/225 (3%)

Query: 116  ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
            I  G  H+  L S+  +++ G    G LGHG  TTQ +    +       V+QV+     
Sbjct: 3112 IACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQ-LKPKMVKVLLGHRVIQVACGSRD 3170

Query: 175  AA--FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            A    +   G VF+ GD      G R  +     P+ +E L G    Q+  G  F+  LT
Sbjct: 3171 AQTLALTDEGLVFSWGDGDFGKLG-RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALT 3229

Query: 233  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
              G V T G   + +LGHG  +    P+ +  L     +V +A G  + LAVT  G VY+
Sbjct: 3230 KSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRG-KKIVHVAVGALHCLAVTDAGQVYA 3288

Query: 293  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
            +G   +   G+G      +P  +Q    +G  + RV+ G  H VA
Sbjct: 3289 WGDNDHGQQGNGTTTVNRKPTLVQGL--EGQKITRVACGSSHSVA 3331



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 50/167 (29%), Positives = 76/167 (45%), Gaps = 4/167 (2%)

Query: 118  TGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
            +G   TL L  + +V+S G    G LG G  +  C    +I+  +   VV+V      + 
Sbjct: 4162 SGDAQTLCLTDDDTVWSWGDGDYGKLGRG-GSDGCKVPMKIDSLTGLGVVKVECGSQFSV 4220

Query: 177  FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
             + +SG V+T G       GH   +  + RPR V+ L+G     +  G       T  G 
Sbjct: 4221 ALTKSGAVYTWGKGDYHRLGHGSDDH-VRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGE 4279

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
            V+T G N  GQLG G T     P+ +A L+    V ++A G ++ LA
Sbjct: 4280 VYTWGDNDEGQLGDGTTNAIQRPRLVAALQG-KKVNRVACGSAHTLA 4325



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 52/169 (30%), Positives = 76/169 (44%), Gaps = 8/169 (4%)

Query: 118 TGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
           +G   TL ++ N  V+S G    G LG G  +  C +   I       VV+V      + 
Sbjct: 613 SGDAQTLAVTENGQVWSWGDGDYGKLGRG-GSDGCKTPKLIEKLQDLDVVKVRCGSQFSI 671

Query: 177 FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
            + + GQV++ G   +   GH  T   +  P+L+E L+G     V AG      LT    
Sbjct: 672 ALTKDGQVYSWGKGDNQRLGH-GTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSE 730

Query: 237 VHTCGSNTHGQLGHGDTL--DRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
           VH+ GSN   Q  H DTL   +P P ++  L +   +V IA GP+   A
Sbjct: 731 VHSWGSNDQCQ--HFDTLRVTKPEPAALPGL-DTKHIVGIACGPAQSFA 776



 Score = 52.0 bits (123), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 36/147 (24%), Positives = 71/147 (48%), Gaps = 5/147 (3%)

Query: 332  DEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 391
            D+  ++   SG +Y WG  + G LG  +     +P P  +L +   VQ+   ++  F + 
Sbjct: 3952 DDWTLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVT 4011

Query: 392  DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRG 449
              G +Y     G+G+ G    G ++ V  P +L+S++   + +++  +G  H + ++  G
Sbjct: 4012 ADGKLYA---TGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 4068

Query: 450  RLFGFGDNERAQLGHDTLRGCLEPTEI 476
             ++ +G+ E  +LGH     C  P  I
Sbjct: 4069 EVYSWGEAEDGKLGHGNRSPCDRPRVI 4095



 Score = 45.4 bits (106), Expect = 0.065,   Method: Compositional matrix adjust.
 Identities = 41/139 (29%), Positives = 65/139 (46%), Gaps = 12/139 (8%)

Query: 344  VYTWGKGYCGALG--HGDEID-KTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 400
            V+ WG      LG   G +I   +  E LS+L     VQV    +  F +   G VY  G
Sbjct: 2969 VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALN---VVQVAGGSKSLFAVTVEGKVYACG 3025

Query: 401  WMGFGSLGFPDRGVSD-KVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDN 457
                G LG    G+S   V  PR + +L ++ V +++  +G  H   +T  G++F +G+ 
Sbjct: 3026 EATNGRLGL---GISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEG 3082

Query: 458  ERAQLGHDTLRGCLEPTEI 476
            +  +LGH +   C +P  I
Sbjct: 3083 DDGKLGHFSRMNCDKPRLI 3101


>gi|410265950|gb|JAA20941.1| hect domain and RLD 2 [Pan troglodytes]
          Length = 4834

 Score =  129 bits (325), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 96/328 (29%), Positives = 158/328 (48%), Gaps = 16/328 (4%)

Query: 161  SAAHVVQVSASENHAAFVLQSGQVFTCGD--NSSFCCGHRDTNRPIFRPRLVEALKGVPC 218
            SA +VVQV+        V   G+V+ CG+  N     G      PI  PR + AL     
Sbjct: 2990 SALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPI--PRQITALSSYVV 3047

Query: 219  KQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA 276
            K+V   +G      LT+ G V + G    G+LGH   ++   P+ I  L+    +  IA 
Sbjct: 3048 KKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALK-TKRIRDIAC 3106

Query: 277  GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEH 334
            G S+  A+T +G +Y++G G    LGHG+   +L+P+ ++     G  V++V+ G  D  
Sbjct: 3107 GSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLL--GHRVIQVACGSRDAQ 3164

Query: 335  VVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 394
             +AL   G V++WG G  G LG G      +P+ +  L      Q+    + +  L  +G
Sbjct: 3165 TLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSG 3224

Query: 395  SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 454
             V+ +G   +  LG    G    V +P++++ LR   +  ++ G  H + VTD G+++ +
Sbjct: 3225 VVWTWGKGDYFRLG---HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAW 3281

Query: 455  GDNERAQLGHDTLRGCLEPTEIFIQEME 482
            GDN+  Q G+ T     +PT   +Q +E
Sbjct: 3282 GDNDHGQQGNGTTTVNRKPT--LVQGLE 3307



 Score =  125 bits (315), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 93/286 (32%), Positives = 140/286 (48%), Gaps = 10/286 (3%)

Query: 183  QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 242
            +VF  G N     G    ++ I  P   E L  +   QV  G      +T+ G V+ CG 
Sbjct: 2960 KVFVWGLNDKDQLGGLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGE 3018

Query: 243  NTHGQLGHG-DTLDRPTPKSIAPLEE-VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 300
             T+G+LG G  +   P P+ I  L   V   V + +G  +  A+T +G V+S+G G +  
Sbjct: 3019 ATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGK 3078

Query: 301  LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 360
            LGH  + +  +PR I+  + K I    ++ G  H  AL SSG +YTWG G  G LGHGD 
Sbjct: 3079 LGHFSRMNCDKPRLIEALKTKRIR--DIACGSSHSAALTSSGELYTWGLGEYGRLGHGDN 3136

Query: 361  IDKTLPEPLSSLKSHLAVQVC--ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKV 418
              +  P+ +  L  H  +QV   +R  +T  L D G V+ +G   FG LG   RG S+  
Sbjct: 3137 TTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLG---RGGSEGC 3193

Query: 419  LRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 464
              P+ ++ L    V QI  G   ++ +T  G ++ +G  +  +LGH
Sbjct: 3194 NIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGH 3239



 Score =  122 bits (305), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 86/280 (30%), Positives = 139/280 (49%), Gaps = 9/280 (3%)

Query: 166  VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 225
            V V++   H   +   G+V++ G+      GH + + P  RPR++E+L+G+    V AG 
Sbjct: 4042 VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRS-PCDRPRVIESLRGIEVVDVAAGG 4100

Query: 226  NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA--AGPSYMLA 283
              +  +T  G ++T G   +G+LGH D+ D+  PK +  L+    VV IA  +G +  L 
Sbjct: 4101 AHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQG-HRVVDIACGSGDAQTLC 4159

Query: 284  VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 343
            +T +  V+S+G G    LG G       P  I +    G+ VV+V  G +  VAL  SG 
Sbjct: 4160 LTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL--TGLGVVKVECGSQFSVALTKSGA 4217

Query: 344  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 403
            VYTWGKG    LGHG +     P  +  L+    + +           + G VY +G   
Sbjct: 4218 VYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDND 4277

Query: 404  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV 443
             G LG    G ++ + RPR++ +L+   V++++ G  HT+
Sbjct: 4278 EGQLG---DGTTNAIQRPRLVAALQGKKVNRVACGSAHTL 4314



 Score =  121 bits (303), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 82/269 (30%), Positives = 131/269 (48%), Gaps = 6/269 (2%)

Query: 207  PRLVEALKGVPCKQV--TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP 264
            P L+E+++ V  K+V   +G      L+  G V++ G    G+LGHG+      P+ I  
Sbjct: 4028 PTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIES 4087

Query: 265  LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH 324
            L  +  VV +AAG ++   VT  G +Y++G G    LGH +  D+L+P+ ++  +   + 
Sbjct: 4088 LRGI-EVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVV 4146

Query: 325  VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARK 384
             +   +GD   + L     V++WG G  G LG G      +P  + SL     V+V    
Sbjct: 4147 DIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGS 4206

Query: 385  RKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV 444
            + +  L  +G+VY +G   +  LG    G  D V RPR +  L+   V  I+TG  H V 
Sbjct: 4207 QFSVALTKSGAVYTWGKGDYHRLG---HGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 4263

Query: 445  VTDRGRLFGFGDNERAQLGHDTLRGCLEP 473
             T+ G ++ +GDN+  QLG  T      P
Sbjct: 4264 CTEDGEVYTWGDNDEGQLGDGTTNAIQRP 4292



 Score =  117 bits (294), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 92/311 (29%), Positives = 151/311 (48%), Gaps = 24/311 (7%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V Q++ +E     + ++G+V+T   NS       DT      P+LV+ L      ++ A 
Sbjct: 453 VTQIACAEKRFLILSRNGRVYTQAYNS-------DT----LAPQLVQGLASRNIVKIAAH 501

Query: 225 LNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGS-VVQIAAGPS 279
            +   +L +   G V++ G    G+LGHGDT+    PK I+    ++ G  VV IA G +
Sbjct: 502 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGST 561

Query: 280 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS--AGDEHVVA 337
           Y  A+T  G +Y++G G+   LGHG   DE  P  +     KG+ V+ V+  +GD   +A
Sbjct: 562 YSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGL--KGLKVIDVACGSGDAQTLA 619

Query: 338 LDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVY 397
           +  +G V++WG G  G LG G       P+ +  L+    V+V    + +  L   G VY
Sbjct: 620 VTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVY 679

Query: 398 GFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDN 457
            +G      LG    G  + V  P++L+ L+   V  ++ G  H + +T+   +  +G N
Sbjct: 680 SWGKGDNQRLG---HGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSN 736

Query: 458 ERAQLGHDTLR 468
           ++ Q   DTLR
Sbjct: 737 DQCQ-HFDTLR 746



 Score =  102 bits (253), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 84/265 (31%), Positives = 126/265 (47%), Gaps = 12/265 (4%)

Query: 96   FLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFT 155
             L+S++H    ++  A N   + G++   L S   V+S G +  G LGHG   + C    
Sbjct: 4030 LLESIQHV--FIKKVAVN---SGGKHCLALSSEGEVYSWGEAEDGKLGHG-NRSPCDRPR 4083

Query: 156  RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 215
             I       VV V+A   H+A V  +G ++T G       GH D+   + +P+LVEAL+G
Sbjct: 4084 VIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQL-KPKLVEALQG 4142

Query: 216  VPCKQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
                 +   +G   T  LT    V + G   +G+LG G +     P  I  L  +G VV+
Sbjct: 4143 HRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLG-VVK 4201

Query: 274  IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
            +  G  + +A+T +G VY++G G    LGHG      +PR +Q    +G  V+ ++ G  
Sbjct: 4202 VECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGL--QGKKVIAIATGSL 4259

Query: 334  HVVALDSSGYVYTWGKGYCGALGHG 358
            H V     G VYTWG    G LG G
Sbjct: 4260 HCVCCTEDGEVYTWGDNDEGQLGDG 4284



 Score =  101 bits (251), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 77/247 (31%), Positives = 125/247 (50%), Gaps = 12/247 (4%)

Query: 235  GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
            G ++  G N  GQLG   G  +  PTP +++A L  V    Q+  G   + AVT +G +Y
Sbjct: 3952 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPV----QLIGGEQTLFAVTADGKLY 4007

Query: 292  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 351
            + G G+   LG G       P  +++ +   I  V V++G +H +AL S G VY+WG+  
Sbjct: 4008 ATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAE 4067

Query: 352  CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 411
             G LGHG+      P  + SL+    V V A    +  +   G +Y +G   +G LG  D
Sbjct: 4068 DGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD 4127

Query: 412  RGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG 469
               S+  L+P+++++L+ H V  I+  +G   T+ +TD   ++ +GD +  +LG     G
Sbjct: 4128 ---SEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDG 4184

Query: 470  CLEPTEI 476
            C  P +I
Sbjct: 4185 CKVPMKI 4191



 Score = 99.8 bits (247), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 79/242 (32%), Positives = 114/242 (47%), Gaps = 7/242 (2%)

Query: 119  GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
            GR+ T L  +  VFS G    G LGH      C     I       +  ++   +H+A +
Sbjct: 3056 GRHATALTVDGKVFSWGEGDDGKLGHF-SRMNCDKPRLIEALKTKRIRDIACGSSHSAAL 3114

Query: 179  LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN--FTGFLTIRGH 236
              SG+++T G       GH D N    +P++V+ L G    QV  G     T  LT  G 
Sbjct: 3115 TSSGELYTWGLGEYGRLGHGD-NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 3173

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 296
            V + G    G+LG G +     P++I  L   G V QI  G  + LA+T +GVV+++G G
Sbjct: 3174 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTWGKG 3232

Query: 297  SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 356
              F LGHG      +P+ ++  R  G  +V V+ G  H +A+  SG VY WG    G  G
Sbjct: 3233 DYFRLGHGSDVHVRKPQVVEGLR--GKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQG 3290

Query: 357  HG 358
            +G
Sbjct: 3291 NG 3292



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 88/328 (26%), Positives = 149/328 (45%), Gaps = 26/328 (7%)

Query: 50  PQKFRSLVDLAASQLCALHSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVET 109
           P +   L +L  +Q+      +  +SRN ++    +   +     + +Q +  S +IV+ 
Sbjct: 442 PIQCEGLANLGVTQIACAEKRFLILSRNGRV--YTQAYNSDTLAPQLVQGLA-SRNIVKI 498

Query: 110 SAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSA 162
           +A     + G ++  L +   V+S G    G LGHG       P+     S  +    + 
Sbjct: 499 AAH----SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQ----AG 550

Query: 163 AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 222
            HVV ++    ++A +   G+++T G  +    GH  +      P LV  LKG+    V 
Sbjct: 551 KHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVA 609

Query: 223 AGLNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 280
            G      L +   G V + G   +G+LG G +    TPK I  L+++  VV++  G  +
Sbjct: 610 CGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL-DVVKVRCGSQF 668

Query: 281 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 340
            +A+T +G VYS+G G N  LGHG +     P+ ++    +G  V+ V+AG  H +AL  
Sbjct: 669 SIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGL--QGKKVIDVAAGSTHCLALTE 726

Query: 341 SGYVYTWGKGYCGALGHGDEIDKTLPEP 368
              V++WG        H D +  T PEP
Sbjct: 727 DSEVHSWGSN--DQCQHFDTLRVTKPEP 752



 Score = 76.3 bits (186), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 58/219 (26%), Positives = 100/219 (45%), Gaps = 21/219 (9%)

Query: 271 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 330
           V QIA      L ++ NG VY+    S          D L P+ +Q    + I  +   +
Sbjct: 453 VTQIACAEKRFLILSRNGRVYTQAYNS----------DTLAPQLVQGLASRNIVKIAAHS 502

Query: 331 GDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLA----VQVCARKRK 386
              H +AL ++G VY+WG G  G LGHGD +    P+ +S+     A    V +      
Sbjct: 503 DGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTY 562

Query: 387 TFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVV 444
           +  +   G +Y +G   +G LG    G S+    P ++  L+   V  ++  +G   T+ 
Sbjct: 563 SAAITAEGELYTWGRGNYGRLG---HGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLA 619

Query: 445 VTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQEMEE 483
           VT+ G+++ +GD +  +LG     GC  P    I+++++
Sbjct: 620 VTENGQVWSWGDGDYGKLGRGGSDGCKTPK--LIEKLQD 656



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 66/225 (29%), Positives = 100/225 (44%), Gaps = 8/225 (3%)

Query: 116  ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
            I  G  H+  L S+  +++ G    G LGHG  TTQ +    +       V+QV+     
Sbjct: 3104 IACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQ-LKPKMVKVLLGHRVIQVACGSRD 3162

Query: 175  AA--FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            A    +   G VF+ GD      G R  +     P+ +E L G    Q+  G  F+  LT
Sbjct: 3163 AQTLALTDEGLVFSWGDGDFGKLG-RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALT 3221

Query: 233  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
              G V T G   + +LGHG  +    P+ +  L     +V +A G  + LAVT +G VY+
Sbjct: 3222 KSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRG-KKIVHVAVGALHCLAVTDSGQVYA 3280

Query: 293  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
            +G   +   G+G      +P  +Q    +G  + RV+ G  H VA
Sbjct: 3281 WGDNDHGQQGNGTTTVNRKPTLVQGL--EGQKITRVACGSSHSVA 3323



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 50/167 (29%), Positives = 76/167 (45%), Gaps = 4/167 (2%)

Query: 118  TGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
            +G   TL L  + +V+S G    G LG G  +  C    +I+  +   VV+V      + 
Sbjct: 4152 SGDAQTLCLTDDDTVWSWGDGDYGKLGRG-GSDGCKVPMKIDSLTGLGVVKVECGSQFSV 4210

Query: 177  FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
             + +SG V+T G       GH   +  + RPR V+ L+G     +  G       T  G 
Sbjct: 4211 ALTKSGAVYTWGKGDYHRLGHGSDDH-VRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGE 4269

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
            V+T G N  GQLG G T     P+ +A L+    V ++A G ++ LA
Sbjct: 4270 VYTWGDNDEGQLGDGTTNAIQRPRLVAALQG-KKVNRVACGSAHTLA 4315



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 52/169 (30%), Positives = 76/169 (44%), Gaps = 8/169 (4%)

Query: 118 TGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
           +G   TL ++ N  V+S G    G LG G  +  C +   I       VV+V      + 
Sbjct: 612 SGDAQTLAVTENGQVWSWGDGDYGKLGRG-GSDGCKTPKLIEKLQDLDVVKVRCGSQFSI 670

Query: 177 FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
            + + GQV++ G   +   GH  T   +  P+L+E L+G     V AG      LT    
Sbjct: 671 ALTKDGQVYSWGKGDNQRLGH-GTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSE 729

Query: 237 VHTCGSNTHGQLGHGDTL--DRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
           VH+ GSN   Q  H DTL   +P P ++  L +   +V IA GP+   A
Sbjct: 730 VHSWGSNDQCQ--HFDTLRVTKPEPAALPGL-DTKHIVGIACGPAQSFA 775



 Score = 52.0 bits (123), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 36/147 (24%), Positives = 71/147 (48%), Gaps = 5/147 (3%)

Query: 332  DEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 391
            D+  ++   SG +Y WG  + G LG  +     +P P  +L +   VQ+   ++  F + 
Sbjct: 3942 DDWTLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVT 4001

Query: 392  DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRG 449
              G +Y     G+G+ G    G ++ V  P +L+S++   + +++  +G  H + ++  G
Sbjct: 4002 ADGKLYA---TGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 4058

Query: 450  RLFGFGDNERAQLGHDTLRGCLEPTEI 476
             ++ +G+ E  +LGH     C  P  I
Sbjct: 4059 EVYSWGEAEDGKLGHGNRSPCDRPRVI 4085



 Score = 45.4 bits (106), Expect = 0.071,   Method: Compositional matrix adjust.
 Identities = 41/139 (29%), Positives = 65/139 (46%), Gaps = 12/139 (8%)

Query: 344  VYTWGKGYCGALG--HGDEID-KTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 400
            V+ WG      LG   G +I   +  E LS+L     VQV    +  F +   G VY  G
Sbjct: 2961 VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALN---VVQVAGGSKSLFAVTVEGKVYACG 3017

Query: 401  WMGFGSLGFPDRGVSD-KVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDN 457
                G LG    G+S   V  PR + +L ++ V +++  +G  H   +T  G++F +G+ 
Sbjct: 3018 EATNGRLGL---GISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEG 3074

Query: 458  ERAQLGHDTLRGCLEPTEI 476
            +  +LGH +   C +P  I
Sbjct: 3075 DDGKLGHFSRMNCDKPRLI 3093


>gi|359477742|ref|XP_002281342.2| PREDICTED: uncharacterized protein LOC100254552 [Vitis vinifera]
          Length = 1082

 Score =  129 bits (325), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 105/332 (31%), Positives = 154/332 (46%), Gaps = 22/332 (6%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V Q++    H A V + G+VFT G+ S    GH   N    RP LVE L       V  G
Sbjct: 269 VHQIACGVRHVALVTRQGEVFTWGEESGGRLGHGIDND-FSRPHLVEFLAVNNVDFVACG 327

Query: 225 LNFTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSYM 281
              T  ++  G + T G  TH  G LGHG  +    PK ++ PLE +  V+ +A G  + 
Sbjct: 328 EYHTCAVSTSGDLFTWGDGTHNAGLLGHGTEVSHWIPKRVSGPLEGL-QVLSVACGTWHS 386

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL--- 338
              T NG +++FG G+   LGHG++     PR +Q     G+  ++V+ G  H  A+   
Sbjct: 387 ALATSNGKLFTFGDGTFGVLGHGDRESVPYPREVQIL--SGLKTIKVACGVWHTAAIIEV 444

Query: 339 -------DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 391
                   SS  ++TWG G    LGHG +    LP  +S+L  +   Q+      T  L 
Sbjct: 445 MSQSGTNISSRKLFTWGDGDKHRLGHGSKETYLLPTCVSALIDYNFHQLACGHTMTVALT 504

Query: 392 DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRL 451
            +G V+  G   +G LG P   +SD  L   + D L    V +IS G YH  V+T R  +
Sbjct: 505 TSGHVFTMGGTAYGQLGNP---LSDGRLPCLVQDKLVGEFVEEISCGAYHVAVLTSRSEV 561

Query: 452 FGFGDNERAQLGHDTLRGCLEPTEIFIQEMEE 483
           F +G     +LGH        PT  F++ +++
Sbjct: 562 FTWGRGANGRLGHGDTEDRRSPT--FVEALKD 591



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 92/348 (26%), Positives = 146/348 (41%), Gaps = 28/348 (8%)

Query: 115 QITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR---INFPSAAHVVQVSA 170
           QI  G  H  L++    VF+ G    G LGHG +      F+R   + F +  +V  V+ 
Sbjct: 271 QIACGVRHVALVTRQGEVFTWGEESGGRLGHGIDN----DFSRPHLVEFLAVNNVDFVAC 326

Query: 171 SENHAAFVLQSGQVFTCGD--NSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFT 228
            E H   V  SG +FT GD  +++   GH          R+   L+G+    V  G   +
Sbjct: 327 GEYHTCAVSTSGDLFTWGDGTHNAGLLGHGTEVSHWIPKRVSGPLEGLQVLSVACGTWHS 386

Query: 229 GFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV---- 284
              T  G + T G  T G LGHGD    P P+ +  L  +   +++A G  +  A+    
Sbjct: 387 ALATSNGKLFTFGDGTFGVLGHGDRESVPYPREVQILSGL-KTIKVACGVWHTAAIIEVM 445

Query: 285 --TGNGV----VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
             +G  +    ++++G G    LGHG +   L P  +        H  +++ G    VAL
Sbjct: 446 SQSGTNISSRKLFTWGDGDKHRLGHGSKETYLLPTCVSALIDYNFH--QLACGHTMTVAL 503

Query: 339 DSSGYVYTWGKGYCGALGHGDEIDKTLPEPL-SSLKSHLAVQVCARKRKTFVLVDTGSVY 397
            +SG+V+T G    G LG+    D  LP  +   L      ++        VL     V+
Sbjct: 504 TTSGHVFTMGGTAYGQLGNPLS-DGRLPCLVQDKLVGEFVEEISCGAYHVAVLTSRSEVF 562

Query: 398 GFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVV 445
            +G    G LG    G ++    P  +++L+  +V  IS G   T  +
Sbjct: 563 TWGRGANGRLG---HGDTEDRRSPTFVEALKDRNVKSISCGSNFTASI 607



 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 63/226 (27%), Positives = 101/226 (44%), Gaps = 18/226 (7%)

Query: 114 MQITTGRYHTLL-ISNSSVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSAS 171
           + +  G +H+ L  SN  +F+ G    GVLGHG    + V + R +   S    ++V+  
Sbjct: 377 LSVACGTWHSALATSNGKLFTFGDGTFGVLGHG--DRESVPYPREVQILSGLKTIKVACG 434

Query: 172 ENHAAFVL----QSG------QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQV 221
             H A ++    QSG      ++FT GD      GH  +      P  V AL      Q+
Sbjct: 435 VWHTAAIIEVMSQSGTNISSRKLFTWGDGDKHRLGH-GSKETYLLPTCVSALIDYNFHQL 493

Query: 222 TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ-IAAGPSY 280
             G   T  LT  GHV T G   +GQLG  + L       +   + VG  V+ I+ G  +
Sbjct: 494 ACGHTMTVALTTSGHVFTMGGTAYGQLG--NPLSDGRLPCLVQDKLVGEFVEEISCGAYH 551

Query: 281 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVV 326
           +  +T    V+++G G+N  LGHG+  D   P  ++  + + +  +
Sbjct: 552 VAVLTSRSEVFTWGRGANGRLGHGDTEDRRSPTFVEALKDRNVKSI 597



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 46/172 (26%), Positives = 77/172 (44%), Gaps = 4/172 (2%)

Query: 308 DELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPE 367
           D L P+++++     +H  +++ G  HV  +   G V+TWG+   G LGHG + D + P 
Sbjct: 254 DVLTPKSLESNVVLDVH--QIACGVRHVALVTRQGEVFTWGEESGGRLGHGIDNDFSRPH 311

Query: 368 PLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRP-RILDS 426
            +  L  +    V   +  T  +  +G ++ +G  G  + G    G       P R+   
Sbjct: 312 LVEFLAVNNVDFVACGEYHTCAVSTSGDLFTWG-DGTHNAGLLGHGTEVSHWIPKRVSGP 370

Query: 427 LRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFI 478
           L    V  ++ G +H+ + T  G+LF FGD     LGH        P E+ I
Sbjct: 371 LEGLQVLSVACGTWHSALATSNGKLFTFGDGTFGVLGHGDRESVPYPREVQI 422



 Score = 52.8 bits (125), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 42/138 (30%), Positives = 65/138 (47%), Gaps = 12/138 (8%)

Query: 338 LDSSGYVYTWGKGYC-GALGHGD------EIDKTLPEPLSSLKSHLAVQVCARKRKTFVL 390
           ++S G VY WG+ +C G L  G       +ID   P+ L S       Q+    R   ++
Sbjct: 223 IESLGDVYVWGEVWCDGVLPDGSVSPFPIKIDVLTPKSLESNVVLDVHQIACGVRHVALV 282

Query: 391 VDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGR 450
              G V+ +G    G LG    G+ +   RP +++ L  ++V  ++ G YHT  V+  G 
Sbjct: 283 TRQGEVFTWGEESGGRLG---HGIDNDFSRPHLVEFLAVNNVDFVACGEYHTCAVSTSGD 339

Query: 451 LFGFGD--NERAQLGHDT 466
           LF +GD  +    LGH T
Sbjct: 340 LFTWGDGTHNAGLLGHGT 357


>gi|332218229|ref|XP_003258261.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 3
           [Nomascus leucogenys]
          Length = 979

 Score =  129 bits (325), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 91/276 (32%), Positives = 142/276 (51%), Gaps = 10/276 (3%)

Query: 204 IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 263
           +  PR  +       + V  GL  T F+   G V+TCG N  GQLGH  +  R  P+ + 
Sbjct: 22  VLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKS--RKKPEQVV 79

Query: 264 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH-GEQHDELQPRAIQTFRRKG 322
            L+   ++V ++ G ++ LA+   G VY++G  S+  LG  G +     PR I++     
Sbjct: 80  ALD-AQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSL--SD 136

Query: 323 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK-TLPEPLSSLKSHLAVQVC 381
           I +V+V+ G  H +AL  +  V+ WG+   G LG G +  K T P+ L SL     +QV 
Sbjct: 137 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLVGIPFMQVA 196

Query: 382 ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYH 441
           A    +FVL  +G+++G+G   FG LG  D   +D+ + P +L SLR+  +  I  G  H
Sbjct: 197 AGGAHSFVLTLSGAIFGWGRNKFGQLGLNDE--NDRYV-PNLLKSLRSQKIVYICCGEDH 253

Query: 442 TVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF 477
           T  +T  G +F FG     QLGH++    + P ++F
Sbjct: 254 TAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVF 289



 Score =  123 bits (308), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 104/333 (31%), Positives = 153/333 (45%), Gaps = 13/333 (3%)

Query: 135 GSSLCGVLGHGPETTQCVSFTRI-NFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSF 193
           G++  G LG G    + V   R  +F     V  V     H  FVL  G V+TCG N   
Sbjct: 5   GNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLG 64

Query: 194 CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGH-GD 252
             GH  + +   +P  V AL       V+ G   T  L  +G V+  G ++ GQLG  G 
Sbjct: 65  QLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGS 121

Query: 253 TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ-HDELQ 311
                 P++I  L ++  +VQ+A G  + LA++    V+ +G      LG G     +  
Sbjct: 122 EECIRVPRNIKSLSDI-QIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTS 180

Query: 312 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSS 371
           P+ +++    GI  ++V+AG  H   L  SG ++ WG+   G LG  DE D+ +P  L S
Sbjct: 181 PQLLKSLV--GIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKS 238

Query: 372 LKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHH 431
           L+S   V +C  +  T  L   G V+ FG  G+G LG      +   + PR +  L    
Sbjct: 239 LRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG---HNSTSHEINPRKVFELMGSI 295

Query: 432 VSQISTGLYHT-VVVTDRGRLFGFGDNERAQLG 463
           V+QI+ G  HT   V   GR++ FG     QLG
Sbjct: 296 VTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 79/291 (27%), Positives = 138/291 (47%), Gaps = 8/291 (2%)

Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 179
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V VS  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVSCGEAHTLALN 100

Query: 180 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 239
             GQV+  G +S    G   +   I  PR +++L  +   QV  G   +  L+    V  
Sbjct: 101 DKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFC 160

Query: 240 CGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
            G N +GQLG G D   + +P+ +  L  +   +Q+AAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKYGQLGLGTDCKKQTSPQLLKSLVGI-PFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 299 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 358
             LG  +++D   P  +++ R + I  V +  G++H  AL   G V+T+G G  G LGH 
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRSQKI--VYICCGEDHTAALTKEGGVFTFGAGGYGQLGHN 277

Query: 359 DEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLG 408
               +  P  +  L   +  Q+ C R+  +  +  +G +Y FG  G G LG
Sbjct: 278 STSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  101 bits (252), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 84/274 (30%), Positives = 132/274 (48%), Gaps = 10/274 (3%)

Query: 98  QSVEHSSDIVETSAGNM-QITTGRYHTLLISNS-SVFSCGSSLCGVLGH-GPETTQCVSF 154
           +S +    +V   A N+  ++ G  HTL +++   V++ G    G LG  G E  +C+  
Sbjct: 70  KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSE--ECIRV 127

Query: 155 TR-INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEAL 213
            R I   S   +VQV+    H+  + ++ +VF  G N     G     +    P+L+++L
Sbjct: 128 PRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSL 187

Query: 214 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
            G+P  QV AG   +  LT+ G +   G N  GQLG  D  DR  P  +  L     +V 
Sbjct: 188 VGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRS-QKIVY 246

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           I  G  +  A+T  G V++FG+G    LGH     E+ PR +  F   G  V +++ G +
Sbjct: 247 ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQ 304

Query: 334 HVVA-LDSSGYVYTWGKGYCGALGHGDEIDKTLP 366
           H  A + SSG +Y++G G  G LG G   ++  P
Sbjct: 305 HTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338



 Score = 80.9 bits (198), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 76/251 (30%), Positives = 119/251 (47%), Gaps = 17/251 (6%)

Query: 70  IYA-GMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLISN 128
           +YA G+  + Q+ LL       +  +R  ++++  SDI       +Q+  G YH+L +S 
Sbjct: 105 VYAWGLDSDGQLGLLGS-----EECIRVPRNIKSLSDI-----QIVQVACGYYHSLALSK 154

Query: 129 SS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTC 187
           +S VF  G +  G LG G +  +  S   +        +QV+A   H+  +  SG +F  
Sbjct: 155 ASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLVGIPFMQVAAGGAHSFVLTLSGAIFGW 214

Query: 188 GDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQ 247
           G N     G  D N   + P L+++L+      +  G + T  LT  G V T G+  +GQ
Sbjct: 215 GRNKFGQLGLNDENDR-YVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQ 273

Query: 248 LGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVVYSFGSGSNFCLGHGE 305
           LGH  T     P+ +   E +GS+V QIA G  +  A V  +G +YSFG G N  LG G 
Sbjct: 274 LGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGS 331

Query: 306 QHDELQPRAIQ 316
             +   P  ++
Sbjct: 332 TSNRKSPFTVK 342


>gi|376260724|ref|YP_005147444.1| RCC1 domain-containing protein, alpha-tubulin suppressor
           [Clostridium sp. BNL1100]
 gi|373944718|gb|AEY65639.1| RCC1 domain-containing protein, alpha-tubulin suppressor
           [Clostridium sp. BNL1100]
          Length = 985

 Score =  129 bits (325), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 89/312 (28%), Positives = 153/312 (49%), Gaps = 17/312 (5%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           +++VS  E+H   +   G V+ CG+N     G+ +T   I  P  VE L  V    ++AG
Sbjct: 177 IIKVSGGESHTLALESDGTVWACGENDYGQLGNNNT-IDINSPIPVEGLNKV--SSISAG 233

Query: 225 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 284
             ++  L   G V T G N +GQLG G T  R +P     ++ +  ++ I++G S+ LA+
Sbjct: 234 KYYSMALKSDGTVWTWGENDYGQLGDGTTATRLSP---VQVQNLSGIIAISSGNSHSLAL 290

Query: 285 TGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
             +G V+++G   +  LG G  + +  P  +Q        +V +S G  + +AL + G V
Sbjct: 291 KDDGTVWAWGDNESGQLGDGTTNSKYIPSQVQGLS----GIVSISCGFYYSMALKNDGTV 346

Query: 345 YTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGF 404
           + WG    G LG G   D+    P+S L   +A+  C     +  L + G+V+ +G+  F
Sbjct: 347 WVWGDNTSGQLGDGTTTDRNTAVPVSGLDGVIAI-ACGVNH-SMALRNDGTVWTWGFNAF 404

Query: 405 GSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 464
           G LG   +   +  +    LD + A     I+ G  H++ + D G ++ +GDN+  QLG+
Sbjct: 405 GQLGDGTKVSKNTAVPISGLDGIIA-----ITCGTSHSMALKDDGTVWAWGDNQYGQLGN 459

Query: 465 DTLRGCLEPTEI 476
            T      P+++
Sbjct: 460 GTFISNTTPSQV 471



 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 97/368 (26%), Positives = 161/368 (43%), Gaps = 29/368 (7%)

Query: 112 GNMQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSA 170
           G + I  G  H++ + N  +V++ G +  G LG G   T+    T +       ++ ++ 
Sbjct: 376 GVIAIACGVNHSMALRNDGTVWTWGFNAFGQLGDG---TKVSKNTAVPISGLDGIIAITC 432

Query: 171 SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
             +H+  +   G V+  GDN     G+  T      P  V  L G+  K +  G + +  
Sbjct: 433 GTSHSMALKDDGTVWAWGDNQYGQLGNG-TFISNTTPSQVSNLSGI--KSIFCGYSTSFA 489

Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSVVQIAAGPSYMLAVTGNG 288
           L   G V   G+N +G+LG G      T + I P E   +G +  I+ G S+ LA+  +G
Sbjct: 490 LKPDGTVWAWGNNEYGELGKG-----FTTRVIYPTETLNIGDIKAISIGSSHCLALKNDG 544

Query: 289 VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 348
            V+++G      LG G    +  P  +Q     GI    +SAG  H +AL S G V+ WG
Sbjct: 545 TVWAWGDNRYGQLGDGTTTIKSLP--VQVSGISGI--TAISAGGSHSLALKSDGTVWAWG 600

Query: 349 KGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLG 408
           +   G LG G + D+  P  +S L     +  C    ++F L + G+V+ +   G  S  
Sbjct: 601 QNNVGQLGDGTKEDRNTPVQVSELSGITVISNCI--YRSFALKNDGTVWVW---GSDSYN 655

Query: 409 FPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLR 468
            P     +K+  P  +  L    +  I  G YH + + + G ++ +G N   Q G  T  
Sbjct: 656 LP----LEKMTMPIQISGLSG--IIAIECGTYHNLALKNDGTVWAWGKNNFGQFGDGTTT 709

Query: 469 GCLEPTEI 476
               P ++
Sbjct: 710 TTNIPVQV 717



 Score = 75.1 bits (183), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 89/358 (24%), Positives = 141/358 (39%), Gaps = 61/358 (17%)

Query: 125 LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAA----HVVQVSASENHAAFVLQ 180
           L  + +V++ G++  G LG G  T       R+ +P+       +  +S   +H   +  
Sbjct: 490 LKPDGTVWAWGNNEYGELGKGFTT-------RVIYPTETLNIGDIKAISIGSSHCLALKN 542

Query: 181 SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTC 240
            G V+  GDN     G   T      P  V  + G+    ++AG + +  L   G V   
Sbjct: 543 DGTVWAWGDNRYGQLGDGTTTIKSL-PVQVSGISGITA--ISAGGSHSLALKSDGTVWAW 599

Query: 241 GSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS-NF 299
           G N  GQLG G   DR TP  ++   E+  +  I+       A+  +G V+ +GS S N 
Sbjct: 600 GQNNVGQLGDGTKEDRNTPVQVS---ELSGITVISNCIYRSFALKNDGTVWVWGSDSYNL 656

Query: 300 CLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGD 359
            L       E     IQ     GI  + +  G  H +AL + G V+ WGK   G  G G 
Sbjct: 657 PL-------EKMTMPIQISGLSGI--IAIECGTYHNLALKNDGTVWAWGKNNFGQFGDGT 707

Query: 360 EIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVL 419
                +P  +S L    A+ V     ++  L   G+V+ +G                   
Sbjct: 708 TTTTNIPVQVSGLSGVKAIAVGG--NRSIALKSDGTVWQWG------------------- 746

Query: 420 RPRILDSLRAHHVSQISTG-----------LYHTVVVTDRGRLFGFGDNERAQLGHDT 466
             RIL S+    V   +T            + + V + + G++F +G N+  QLG  T
Sbjct: 747 --RILVSVSPSTVETWTTARQVDGLSEIVSISNNVALKNDGKVFTWGANDYGQLGDGT 802



 Score = 66.2 bits (160), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 82/350 (23%), Positives = 137/350 (39%), Gaps = 71/350 (20%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           I+ G  H L + N  +V++ G +  G LG G  T + +    +     + +  +SA  +H
Sbjct: 530 ISIGSSHCLALKNDGTVWAWGDNRYGQLGDGTTTIKSLP---VQVSGISGITAISAGGSH 586

Query: 175 AAFVLQSGQVFTCGDNSSFCCG---HRDTNRPIFRPRLVE------------ALKG---- 215
           +  +   G V+  G N+    G     D N P+    L              ALK     
Sbjct: 587 SLALKSDGTVWAWGQNNVGQLGDGTKEDRNTPVQVSELSGITVISNCIYRSFALKNDGTV 646

Query: 216 ---------VPCKQVTAGLNFTGF---------------LTIRGHVHTCGSNTHGQLGHG 251
                    +P +++T  +  +G                L   G V   G N  GQ G G
Sbjct: 647 WVWGSDSYNLPLEKMTMPIQISGLSGIIAIECGTYHNLALKNDGTVWAWGKNNFGQFGDG 706

Query: 252 DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQ 311
            T     P  ++ L  V +   IA G +  +A+  +G V+ +G               + 
Sbjct: 707 TTTTTNIPVQVSGLSGVKA---IAVGGNRSIALKSDGTVWQWG----------RILVSVS 753

Query: 312 PRAIQTF----RRKGI-HVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP 366
           P  ++T+    +  G+  +V +S    + VAL + G V+TWG    G LG G    +   
Sbjct: 754 PSTVETWTTARQVDGLSEIVSIS----NNVALKNDGKVFTWGANDYGQLGDGTTTARVTV 809

Query: 367 EPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSD 416
            P+S L+      V +    + VL++ G++  +G   FG LG  +RG  D
Sbjct: 810 APVSGLEG--VAGVASSDTTSMVLMNDGTIRAWGKNNFGQLGNGERGFYD 857


>gi|350593460|ref|XP_003133446.3| PREDICTED: E3 ubiquitin-protein ligase HERC2-like, partial [Sus
            scrofa]
          Length = 4060

 Score =  129 bits (325), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 96/328 (29%), Positives = 158/328 (48%), Gaps = 16/328 (4%)

Query: 161  SAAHVVQVSASENHAAFVLQSGQVFTCGD--NSSFCCGHRDTNRPIFRPRLVEALKGVPC 218
            SA +VVQV+        V   G+V+ CG+  N     G      PI  PR + AL     
Sbjct: 2215 SALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPI--PRQITALSSYVV 2272

Query: 219  KQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA 276
            K+V   +G      LT+ G V + G    G+LGH   ++   P+ I  L+    +  IA 
Sbjct: 2273 KKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALK-TKRIRDIAC 2331

Query: 277  GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEH 334
            G S+  A+T +G +Y++G G    LGHG+   +L+P+ ++     G  V++V+ G  D  
Sbjct: 2332 GSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLL--GHRVIQVACGSRDAQ 2389

Query: 335  VVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 394
             +AL   G V++WG G  G LG G      +P+ +  L      Q+    + +  L  +G
Sbjct: 2390 TLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSG 2449

Query: 395  SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 454
             V+ +G   +  LG    G    V +P++++ LR   +  ++ G  H + VTD G+++ +
Sbjct: 2450 VVWTWGKGDYFRLG---HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAW 2506

Query: 455  GDNERAQLGHDTLRGCLEPTEIFIQEME 482
            GDN+  Q G+ T     +PT   +Q +E
Sbjct: 2507 GDNDHGQQGNGTTTVNRKPT--LVQGLE 2532



 Score =  125 bits (315), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 93/286 (32%), Positives = 140/286 (48%), Gaps = 10/286 (3%)

Query: 183  QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 242
            +VF  G N     G    ++ I  P   E L  +   QV  G      +T+ G V+ CG 
Sbjct: 2185 KVFVWGLNDKDQLGGLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGE 2243

Query: 243  NTHGQLGHG-DTLDRPTPKSIAPLEE-VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 300
             T+G+LG G  +   P P+ I  L   V   V + +G  +  A+T +G V+S+G G +  
Sbjct: 2244 ATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGK 2303

Query: 301  LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 360
            LGH  + +  +PR I+  + K I    ++ G  H  AL SSG +YTWG G  G LGHGD 
Sbjct: 2304 LGHFSRMNCDKPRLIEALKTKRIR--DIACGSSHSAALTSSGELYTWGLGEYGRLGHGDN 2361

Query: 361  IDKTLPEPLSSLKSHLAVQVC--ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKV 418
              +  P+ +  L  H  +QV   +R  +T  L D G V+ +G   FG LG   RG S+  
Sbjct: 2362 TTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLG---RGGSEGC 2418

Query: 419  LRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 464
              P+ ++ L    V QI  G   ++ +T  G ++ +G  +  +LGH
Sbjct: 2419 NIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGH 2464



 Score =  116 bits (290), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 85/280 (30%), Positives = 139/280 (49%), Gaps = 10/280 (3%)

Query: 166  VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 225
            V V++   H   +   G+V++ G+      GH + + P  RPR++E+L+G+    V AG 
Sbjct: 3269 VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRS-PCDRPRVIESLRGIEVVDVAAGG 3327

Query: 226  NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA--AGPSYMLA 283
              +  +T  G ++T G   +G+LGH D+ D+  PK +  L+    VV +A  +G +  L 
Sbjct: 3328 AHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVDALQG-HRVVDVACGSGDAQTLC 3386

Query: 284  VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 343
            +T +  V+S+G G    LG G       P  I +    G+ VV+V  G +  VAL  SG 
Sbjct: 3387 LTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL--TGLGVVKVECGSQFSVALTKSGA 3444

Query: 344  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 403
            VYTWGKG    LGHG +     P  +  L+    + +           + GS Y +G   
Sbjct: 3445 VYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGS-YTWGDND 3503

Query: 404  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV 443
             G LG    G ++ + RPR++ +L+   V++++ G  HT+
Sbjct: 3504 EGQLG---DGTTNAIQRPRLVAALQGKKVNRVACGSAHTL 3540



 Score =  115 bits (288), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 92/315 (29%), Positives = 145/315 (46%), Gaps = 8/315 (2%)

Query: 161  SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQ 220
            +A   VQ+   E     V   G+++  G  +    G   T   +  P L+E+++ V  K+
Sbjct: 3210 AALRPVQLIGGEQTLFAVTADGKLYATGYGAGGRLGIGGTES-VSTPTLLESIQHVFIKK 3268

Query: 221  V--TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGP 278
            V   +G      L+  G V++ G    G+LGHG+      P+ I  L  +  VV +AAG 
Sbjct: 3269 VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGI-EVVDVAAGG 3327

Query: 279  SYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
            ++   VT  G +Y++G G    LGH +  D+L+P+ +   +   +  V   +GD   + L
Sbjct: 3328 AHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVDALQGHRVVDVACGSGDAQTLCL 3387

Query: 339  DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYG 398
                 V++WG G  G LG G      +P  + SL     V+V    + +  L  +G+VY 
Sbjct: 3388 TDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYT 3447

Query: 399  FGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNE 458
            +G   +  LG    G  D V RPR +  L+   V  I+TG  H V  T+ G  + +GDN+
Sbjct: 3448 WGKGDYHRLG---HGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGS-YTWGDND 3503

Query: 459  RAQLGHDTLRGCLEP 473
              QLG  T      P
Sbjct: 3504 EGQLGDGTTNAIQRP 3518



 Score =  102 bits (255), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 77/247 (31%), Positives = 125/247 (50%), Gaps = 12/247 (4%)

Query: 235  GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
            G ++  G N  GQLG   G  +  PTP +++A L  V    Q+  G   + AVT +G +Y
Sbjct: 3179 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALAALRPV----QLIGGEQTLFAVTADGKLY 3234

Query: 292  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 351
            + G G+   LG G       P  +++ +   I  V V++G +H +AL S G VY+WG+  
Sbjct: 3235 ATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAE 3294

Query: 352  CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 411
             G LGHG+      P  + SL+    V V A    +  +   G +Y +G   +G LG  D
Sbjct: 3295 DGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD 3354

Query: 412  RGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG 469
               S+  L+P+++D+L+ H V  ++  +G   T+ +TD   ++ +GD +  +LG     G
Sbjct: 3355 ---SEDQLKPKLVDALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDG 3411

Query: 470  CLEPTEI 476
            C  P +I
Sbjct: 3412 CKVPMKI 3418



 Score = 98.6 bits (244), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 78/242 (32%), Positives = 114/242 (47%), Gaps = 7/242 (2%)

Query: 119  GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
            GR+ T L  +  VFS G    G LGH      C     I       +  ++   +H+A +
Sbjct: 2281 GRHATALTVDGKVFSWGEGDDGKLGHF-SRMNCDKPRLIEALKTKRIRDIACGSSHSAAL 2339

Query: 179  LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN--FTGFLTIRGH 236
              SG+++T G       GH D N    +P++V+ L G    QV  G     T  LT  G 
Sbjct: 2340 TSSGELYTWGLGEYGRLGHGD-NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 2398

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 296
            V + G    G+LG G +     P++I  L   G V QI  G  + LA+T +GVV+++G G
Sbjct: 2399 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTWGKG 2457

Query: 297  SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 356
              F LGHG      +P+ ++  R  G  +V V+ G  H +A+  +G VY WG    G  G
Sbjct: 2458 DYFRLGHGSDVHVRKPQVVEGLR--GKKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQG 2515

Query: 357  HG 358
            +G
Sbjct: 2516 NG 2517



 Score = 94.7 bits (234), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 83/265 (31%), Positives = 125/265 (47%), Gaps = 13/265 (4%)

Query: 96   FLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFT 155
             L+S++H    ++  A N   + G++   L S   V+S G +  G LGHG   + C    
Sbjct: 3257 LLESIQHV--FIKKVAVN---SGGKHCLALSSEGEVYSWGEAEDGKLGHG-NRSPCDRPR 3310

Query: 156  RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 215
             I       VV V+A   H+A V  +G ++T G       GH D+   + +P+LV+AL+G
Sbjct: 3311 VIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQL-KPKLVDALQG 3369

Query: 216  VPCKQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
                 V   +G   T  LT    V + G   +G+LG G +     P  I  L  +G VV+
Sbjct: 3370 HRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLG-VVK 3428

Query: 274  IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
            +  G  + +A+T +G VY++G G    LGHG      +PR +Q    +G  V+ ++ G  
Sbjct: 3429 VECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGL--QGKKVIAIATGSL 3486

Query: 334  HVVALDSSGYVYTWGKGYCGALGHG 358
            H V     G  YTWG    G LG G
Sbjct: 3487 HCVCCTEDGS-YTWGDNDEGQLGDG 3510



 Score = 65.9 bits (159), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 66/225 (29%), Positives = 99/225 (44%), Gaps = 8/225 (3%)

Query: 116  ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
            I  G  H+  L S+  +++ G    G LGHG  TTQ +    +       V+QV+     
Sbjct: 2329 IACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQ-LKPKMVKVLLGHRVIQVACGSRD 2387

Query: 175  AA--FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            A    +   G VF+ GD      G R  +     P+ +E L G    Q+  G  F+  LT
Sbjct: 2388 AQTLALTDEGLVFSWGDGDFGKLG-RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALT 2446

Query: 233  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
              G V T G   + +LGHG  +    P+ +  L     +V +A G  + LAVT  G VY+
Sbjct: 2447 KSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRG-KKIVHVAVGALHCLAVTDAGQVYA 2505

Query: 293  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
            +G   +   G+G      +P  +Q    +G  + RV+ G  H VA
Sbjct: 2506 WGDNDHGQQGNGTTTVNRKPTLVQGL--EGQKITRVACGSSHSVA 2548



 Score = 53.5 bits (127), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 47/205 (22%), Positives = 87/205 (42%), Gaps = 19/205 (9%)

Query: 278  PSYMLAVTGNGVVYSFGSGSNFCLGHGEQHD----ELQPRAIQTFRRKGIHVVRVSAGDE 333
            P   L      +      G N  + H E HD    E   + +Q   R+          D+
Sbjct: 3121 PRLFLDEVAKKIRELMADGENMDVLH-ESHDIFRREQDEQLVQWMNRRP---------DD 3170

Query: 334  HVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDT 393
              ++   SG +Y WG  + G LG  +     +P P  +L +   VQ+   ++  F +   
Sbjct: 3171 WTLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALAALRPVQLIGGEQTLFAVTAD 3230

Query: 394  GSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRL 451
            G +Y     G+G+ G    G ++ V  P +L+S++   + +++  +G  H + ++  G +
Sbjct: 3231 GKLYA---TGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEV 3287

Query: 452  FGFGDNERAQLGHDTLRGCLEPTEI 476
            + +G+ E  +LGH     C  P  I
Sbjct: 3288 YSWGEAEDGKLGHGNRSPCDRPRVI 3312



 Score = 47.4 bits (111), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 49/167 (29%), Positives = 75/167 (44%), Gaps = 5/167 (2%)

Query: 118  TGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
            +G   TL L  + +V+S G    G LG G  +  C    +I+  +   VV+V      + 
Sbjct: 3379 SGDAQTLCLTDDDTVWSWGDGDYGKLGRG-GSDGCKVPMKIDSLTGLGVVKVECGSQFSV 3437

Query: 177  FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
             + +SG V+T G       GH   +  + RPR V+ L+G     +  G       T  G 
Sbjct: 3438 ALTKSGAVYTWGKGDYHRLGHGSDDH-VRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGS 3496

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
             +T G N  GQLG G T     P+ +A L+    V ++A G ++ LA
Sbjct: 3497 -YTWGDNDEGQLGDGTTNAIQRPRLVAALQG-KKVNRVACGSAHTLA 3541



 Score = 45.4 bits (106), Expect = 0.064,   Method: Compositional matrix adjust.
 Identities = 41/139 (29%), Positives = 65/139 (46%), Gaps = 12/139 (8%)

Query: 344  VYTWGKGYCGALG--HGDEID-KTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 400
            V+ WG      LG   G +I   +  E LS+L     VQV    +  F +   G VY  G
Sbjct: 2186 VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALN---VVQVAGGSKSLFAVTVEGKVYACG 2242

Query: 401  WMGFGSLGFPDRGVSD-KVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDN 457
                G LG    G+S   V  PR + +L ++ V +++  +G  H   +T  G++F +G+ 
Sbjct: 2243 EATNGRLGL---GISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEG 2299

Query: 458  ERAQLGHDTLRGCLEPTEI 476
            +  +LGH +   C +P  I
Sbjct: 2300 DDGKLGHFSRMNCDKPRLI 2318


>gi|359473366|ref|XP_002273996.2| PREDICTED: uncharacterized protein LOC100250008 [Vitis vinifera]
          Length = 1047

 Score =  129 bits (324), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 101/350 (28%), Positives = 161/350 (46%), Gaps = 31/350 (8%)

Query: 140 GVLGHGPETTQCVSFTRIN--FPSAAH------VVQVSASENHAAFVLQSGQVFTCGDNS 191
           G++G G       S T+I+   P A        V  ++    HA  V + G+VF+ G+  
Sbjct: 261 GIMGAGVHRVGSSSSTKIDALLPKALESTVVLDVHSIACGGKHAVLVTKKGEVFSWGEEC 320

Query: 192 SFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTH--GQLG 249
               GH      +  P+L++AL G+  + V  G   +  +T+ G ++T G  TH  G LG
Sbjct: 321 GSRLGH-GVEVDVSHPKLIDALCGMNIELVACGEYHSCAVTLSGDLYTWGDGTHNSGLLG 379

Query: 250 HGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDE 309
           HG       PK ++   E   V  +A GP +   VT  G +++FG G+   LGHG+    
Sbjct: 380 HGSEASHWIPKKVSGPMEGMHVSYVACGPWHTAVVTSAGQLFTFGDGTFGALGHGDHSSM 439

Query: 310 LQPRAIQTFRRKGIHVVRVSAGDEHVVAL---------------DSSGYVYTWGKGYCGA 354
             PR ++  R  G   +RV+ G  H  A+                SSG ++TWG G  G 
Sbjct: 440 SIPREVEALR--GQRTMRVACGVWHTAAVVELMIASSSFESSGSSSSGKLFTWGDGDKGR 497

Query: 355 LGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGV 414
           LGHGD+  + +P+ +++L +    QV      +  L  +G VY  G   +G LG P   V
Sbjct: 498 LGHGDKEPRLVPQSVTALINESFCQVACGHNLSVALTTSGRVYTMGSAVYGQLGSP---V 554

Query: 415 SDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 464
           +D  +   +   +    V +++ G YH  V+T +  ++ +G     QLGH
Sbjct: 555 ADGKIPTLVEGKIANSFVEEVACGSYHVAVLTSKTEVYTWGKGTNGQLGH 604



 Score = 99.0 bits (245), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 88/281 (31%), Positives = 128/281 (45%), Gaps = 32/281 (11%)

Query: 116 ITTGRYHTLLISNSS---VFSCGSSLCGVLGHGPETTQCVSFTRINFP-SAAHVVQVSAS 171
           +  G YH+  ++ S     +  G+   G+LGHG E +  +   +++ P    HV  V+  
Sbjct: 349 VACGEYHSCAVTLSGDLYTWGDGTHNSGLLGHGSEASHWIP-KKVSGPMEGMHVSYVACG 407

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
             H A V  +GQ+FT GD +    GH D +  +  PR VEAL+G    +V  G+  T  +
Sbjct: 408 PWHTAVVTSAGQLFTFGDGTFGALGHGD-HSSMSIPREVEALRGQRTMRVACGVWHTAAV 466

Query: 232 T---------------IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA 276
                             G + T G    G+LGHGD   R  P+S+  L    S  Q+A 
Sbjct: 467 VELMIASSSFESSGSSSSGKLFTWGDGDKGRLGHGDKEPRLVPQSVTALINE-SFCQVAC 525

Query: 277 GPSYMLAVTGNGVVYSFGSGSNFCLG----HGEQHDELQPRAIQTFRRKGIHVVRVSAGD 332
           G +  +A+T +G VY+ GS     LG     G+    ++ +   +F      V  V+ G 
Sbjct: 526 GHNLSVALTTSGRVYTMGSAVYGQLGSPVADGKIPTLVEGKIANSF------VEEVACGS 579

Query: 333 EHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
            HV  L S   VYTWGKG  G LGHGD   +  P  +  LK
Sbjct: 580 YHVAVLTSKTEVYTWGKGTNGQLGHGDNDHRNTPTLVDFLK 620



 Score = 86.3 bits (212), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 75/259 (28%), Positives = 119/259 (45%), Gaps = 32/259 (12%)

Query: 237 VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 296
           VH  GS++  ++      D   PK++     V  V  IA G  + + VT  G V+S+G  
Sbjct: 267 VHRVGSSSSTKI------DALLPKALESTV-VLDVHSIACGGKHAVLVTKKGEVFSWGEE 319

Query: 297 SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY--CGA 354
               LGHG + D   P+ I      G+++  V+ G+ H  A+  SG +YTWG G    G 
Sbjct: 320 CGSRLGHGVEVDVSHPKLIDAL--CGMNIELVACGEYHSCAVTLSGDLYTWGDGTHNSGL 377

Query: 355 LGHGDEIDKTLPEPLSSLKS--HLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDR 412
           LGHG E    +P+ +S      H++   C     T V+   G ++ FG   FG+LG  D 
Sbjct: 378 LGHGSEASHWIPKKVSGPMEGMHVSYVACG-PWHTAVVTSAGQLFTFGDGTFGALGHGDH 436

Query: 413 GVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTD---------------RGRLFGFGDN 457
                +  PR +++LR     +++ G++HT  V +                G+LF +GD 
Sbjct: 437 S---SMSIPREVEALRGQRTMRVACGVWHTAAVVELMIASSSFESSGSSSSGKLFTWGDG 493

Query: 458 ERAQLGHDTLRGCLEPTEI 476
           ++ +LGH      L P  +
Sbjct: 494 DKGRLGHGDKEPRLVPQSV 512



 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 76/283 (26%), Positives = 130/283 (45%), Gaps = 19/283 (6%)

Query: 207 PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 266
           P+ +E+   +    +  G      +T +G V + G     +LGHG  +D   PK I  L 
Sbjct: 283 PKALESTVVLDVHSIACGGKHAVLVTKKGEVFSWGEECGSRLGHGVEVDVSHPKLIDALC 342

Query: 267 EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC--LGHGEQHDELQPRAIQTFRRKGIH 324
            + ++  +A G  +  AVT +G +Y++G G++    LGHG +     P+ + +   +G+H
Sbjct: 343 GM-NIELVACGEYHSCAVTLSGDLYTWGDGTHNSGLLGHGSEASHWIPKKV-SGPMEGMH 400

Query: 325 VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARK 384
           V  V+ G  H   + S+G ++T+G G  GALGHGD    ++P  + +L+    ++V    
Sbjct: 401 VSYVACGPWHTAVVTSAGQLFTFGDGTFGALGHGDHSSMSIPREVEALRGQRTMRVACGV 460

Query: 385 RKTFVLVD-------------TGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHH 431
             T  +V+             + S   F W G G  G    G  +  L P+ + +L    
Sbjct: 461 WHTAAVVELMIASSSFESSGSSSSGKLFTW-GDGDKGRLGHGDKEPRLVPQSVTALINES 519

Query: 432 VSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPT 474
             Q++ G   +V +T  GR++  G     QLG     G + PT
Sbjct: 520 FCQVACGHNLSVALTTSGRVYTMGSAVYGQLGSPVADGKI-PT 561



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 61/227 (26%), Positives = 98/227 (43%), Gaps = 19/227 (8%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           +  G +HT +++++  +F+ G    G LGHG  ++  +    +        ++V+    H
Sbjct: 404 VACGPWHTAVVTSAGQLFTFGDGTFGALGHGDHSSMSIP-REVEALRGQRTMRVACGVWH 462

Query: 175 AAFVLQ---------------SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCK 219
            A V++               SG++FT GD      GH D   P   P+ V AL      
Sbjct: 463 TAAVVELMIASSSFESSGSSSSGKLFTWGDGDKGRLGHGD-KEPRLVPQSVTALINESFC 521

Query: 220 QVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPS 279
           QV  G N +  LT  G V+T GS  +GQLG     D   P  +        V ++A G  
Sbjct: 522 QVACGHNLSVALTTSGRVYTMGSAVYGQLG-SPVADGKIPTLVEGKIANSFVEEVACGSY 580

Query: 280 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVV 326
           ++  +T    VY++G G+N  LGHG+      P  +   + K +  V
Sbjct: 581 HVAVLTSKTEVYTWGKGTNGQLGHGDNDHRNTPTLVDFLKDKQVKNV 627



 Score = 48.5 bits (114), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 57/219 (26%), Positives = 97/219 (44%), Gaps = 14/219 (6%)

Query: 68  HSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLIS 127
           H  ++ MS   ++E L       +R +R    V H++ +VE     M  ++    +   S
Sbjct: 433 HGDHSSMSIPREVEALRG-----QRTMRVACGVWHTAAVVEL----MIASSSFESSGSSS 483

Query: 128 NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTC 187
           +  +F+ G    G LGHG +  + V  +     + +   QV+   N +  +  SG+V+T 
Sbjct: 484 SGKLFTWGDGDKGRLGHGDKEPRLVPQSVTALINES-FCQVACGHNLSVALTTSGRVYTM 542

Query: 188 GDNSSFCCGHRDTNRPIFRPRLVEA-LKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHG 246
           G       G    +  I  P LVE  +     ++V  G      LT +  V+T G  T+G
Sbjct: 543 GSAVYGQLGSPVADGKI--PTLVEGKIANSFVEEVACGSYHVAVLTSKTEVYTWGKGTNG 600

Query: 247 QLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 285
           QLGHGD   R TP  +  L++   V  +  G ++  A++
Sbjct: 601 QLGHGDNDHRNTPTLVDFLKD-KQVKNVVCGLNFTAAIS 638



 Score = 41.6 bits (96), Expect = 0.91,   Method: Compositional matrix adjust.
 Identities = 36/129 (27%), Positives = 58/129 (44%), Gaps = 6/129 (4%)

Query: 125 LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQV 184
           L ++  V++ GS++ G LG      +  +       ++  V +V+    H A +    +V
Sbjct: 533 LTTSGRVYTMGSAVYGQLGSPVADGKIPTLVEGKIANS-FVEEVACGSYHVAVLTSKTEV 591

Query: 185 FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHV----HTC 240
           +T G  ++   GH D N     P LV+ LK    K V  GLNFT  +++   V    H+ 
Sbjct: 592 YTWGKGTNGQLGHGD-NDHRNTPTLVDFLKDKQVKNVVCGLNFTAAISLHKWVSCADHSI 650

Query: 241 GSNTHGQLG 249
            S  H Q G
Sbjct: 651 CSGCHNQFG 659


>gi|332218227|ref|XP_003258260.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
           [Nomascus leucogenys]
          Length = 1057

 Score =  129 bits (324), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 91/276 (32%), Positives = 142/276 (51%), Gaps = 10/276 (3%)

Query: 204 IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 263
           +  PR  +       + V  GL  T F+   G V+TCG N  GQLGH  +  R  P+ + 
Sbjct: 22  VLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKS--RKKPEQVV 79

Query: 264 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH-GEQHDELQPRAIQTFRRKG 322
            L+   ++V ++ G ++ LA+   G VY++G  S+  LG  G +     PR I++     
Sbjct: 80  ALD-AQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSL--SD 136

Query: 323 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK-TLPEPLSSLKSHLAVQVC 381
           I +V+V+ G  H +AL  +  V+ WG+   G LG G +  K T P+ L SL     +QV 
Sbjct: 137 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLVGIPFMQVA 196

Query: 382 ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYH 441
           A    +FVL  +G+++G+G   FG LG  D   +D+ + P +L SLR+  +  I  G  H
Sbjct: 197 AGGAHSFVLTLSGAIFGWGRNKFGQLGLNDE--NDRYV-PNLLKSLRSQKIVYICCGEDH 253

Query: 442 TVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF 477
           T  +T  G +F FG     QLGH++    + P ++F
Sbjct: 254 TAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVF 289



 Score =  122 bits (307), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 104/333 (31%), Positives = 153/333 (45%), Gaps = 13/333 (3%)

Query: 135 GSSLCGVLGHGPETTQCVSFTRI-NFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSF 193
           G++  G LG G    + V   R  +F     V  V     H  FVL  G V+TCG N   
Sbjct: 5   GNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLG 64

Query: 194 CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGH-GD 252
             GH  + +   +P  V AL       V+ G   T  L  +G V+  G ++ GQLG  G 
Sbjct: 65  QLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGS 121

Query: 253 TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ-HDELQ 311
                 P++I  L ++  +VQ+A G  + LA++    V+ +G      LG G     +  
Sbjct: 122 EECIRVPRNIKSLSDI-QIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTS 180

Query: 312 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSS 371
           P+ +++    GI  ++V+AG  H   L  SG ++ WG+   G LG  DE D+ +P  L S
Sbjct: 181 PQLLKSLV--GIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKS 238

Query: 372 LKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHH 431
           L+S   V +C  +  T  L   G V+ FG  G+G LG      +   + PR +  L    
Sbjct: 239 LRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG---HNSTSHEINPRKVFELMGSI 295

Query: 432 VSQISTGLYHT-VVVTDRGRLFGFGDNERAQLG 463
           V+QI+ G  HT   V   GR++ FG     QLG
Sbjct: 296 VTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 79/291 (27%), Positives = 138/291 (47%), Gaps = 8/291 (2%)

Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 179
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V VS  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVSCGEAHTLALN 100

Query: 180 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 239
             GQV+  G +S    G   +   I  PR +++L  +   QV  G   +  L+    V  
Sbjct: 101 DKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFC 160

Query: 240 CGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
            G N +GQLG G D   + +P+ +  L  +   +Q+AAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKYGQLGLGTDCKKQTSPQLLKSLVGI-PFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 299 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 358
             LG  +++D   P  +++ R + I  V +  G++H  AL   G V+T+G G  G LGH 
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRSQKI--VYICCGEDHTAALTKEGGVFTFGAGGYGQLGHN 277

Query: 359 DEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLG 408
               +  P  +  L   +  Q+ C R+  +  +  +G +Y FG  G G LG
Sbjct: 278 STSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 84/274 (30%), Positives = 132/274 (48%), Gaps = 10/274 (3%)

Query: 98  QSVEHSSDIVETSAGNM-QITTGRYHTLLISNS-SVFSCGSSLCGVLGH-GPETTQCVSF 154
           +S +    +V   A N+  ++ G  HTL +++   V++ G    G LG  G E  +C+  
Sbjct: 70  KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSE--ECIRV 127

Query: 155 TR-INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEAL 213
            R I   S   +VQV+    H+  + ++ +VF  G N     G     +    P+L+++L
Sbjct: 128 PRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSL 187

Query: 214 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
            G+P  QV AG   +  LT+ G +   G N  GQLG  D  DR  P  +  L     +V 
Sbjct: 188 VGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRS-QKIVY 246

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           I  G  +  A+T  G V++FG+G    LGH     E+ PR +  F   G  V +++ G +
Sbjct: 247 ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQ 304

Query: 334 HVVA-LDSSGYVYTWGKGYCGALGHGDEIDKTLP 366
           H  A + SSG +Y++G G  G LG G   ++  P
Sbjct: 305 HTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 76/251 (30%), Positives = 119/251 (47%), Gaps = 17/251 (6%)

Query: 70  IYA-GMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLISN 128
           +YA G+  + Q+ LL       +  +R  ++++  SDI       +Q+  G YH+L +S 
Sbjct: 105 VYAWGLDSDGQLGLLGS-----EECIRVPRNIKSLSDI-----QIVQVACGYYHSLALSK 154

Query: 129 SS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTC 187
           +S VF  G +  G LG G +  +  S   +        +QV+A   H+  +  SG +F  
Sbjct: 155 ASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLVGIPFMQVAAGGAHSFVLTLSGAIFGW 214

Query: 188 GDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQ 247
           G N     G  D N   + P L+++L+      +  G + T  LT  G V T G+  +GQ
Sbjct: 215 GRNKFGQLGLNDENDR-YVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQ 273

Query: 248 LGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVVYSFGSGSNFCLGHGE 305
           LGH  T     P+ +   E +GS+V QIA G  +  A V  +G +YSFG G N  LG G 
Sbjct: 274 LGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGS 331

Query: 306 QHDELQPRAIQ 316
             +   P  ++
Sbjct: 332 TSNRKSPFTVK 342


>gi|312373149|gb|EFR20956.1| hypothetical protein AND_18231 [Anopheles darlingi]
          Length = 1270

 Score =  129 bits (324), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 94/311 (30%), Positives = 155/311 (49%), Gaps = 9/311 (2%)

Query: 156 RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 215
           ++++  A  + + +   +H   +   G++++CG+N     GH   + P  RP+L+ AL+ 
Sbjct: 340 KMDWMHAKEIARAACGASHTLLLTNDGKMYSCGNNDHGQLGHDVESLPNKRPQLLTALEN 399

Query: 216 VPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGH-GDTLDRPTPKSIAPLEEVGSVVQI 274
               Q   G   +  LT  G V++ GSN  GQLG   DT  +  P+ I  +     VVQI
Sbjct: 400 YIITQACCGTAHSLALTNWGQVYSWGSNAVGQLGQETDTTRQIIPRLIRSI-AAKQVVQI 458

Query: 275 AAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQ-PRAIQTFRRKGIHVVRVSAGDE 333
           AAG  + LA+T +G +Y++GS +   LG G  ++++  P  +Q+    G+ +  ++ G  
Sbjct: 459 AAGHYHCLALTNSGELYAWGSNAYGQLGLGMTNEKVSTPTLVQSL--AGVPIAFIACGGN 516

Query: 334 HVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDT 393
           H  A+  SG ++ WGK   G LG  D   +  P  L +L+S     V      +  L   
Sbjct: 517 HSFAVSKSGAIFGWGKNTFGQLGLNDLNSRQFPTQLRTLRSLGVRYVSCGDDFSVFLTAG 576

Query: 394 GSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV-VTDRGRLF 452
           G V+  G   FG LG    G  +  + PR++  L    ++QI+ G  HT+  V  RG+++
Sbjct: 577 GGVFTCGAGTFGQLG---HGSCNNEILPRMVFELMGSKITQIACGRRHTLAFVPSRGKIY 633

Query: 453 GFGDNERAQLG 463
           GFG +   QLG
Sbjct: 634 GFGLSGVGQLG 644



 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 101/323 (31%), Positives = 152/323 (47%), Gaps = 14/323 (4%)

Query: 119 GRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAF 177
           G  HTLL++N   ++SCG++  G LGH  E+        +       + Q      H+  
Sbjct: 355 GASHTLLLTNDGKMYSCGNNDHGQLGHDVESLPNKRPQLLTALENYIITQACCGTAHSLA 414

Query: 178 VLQSGQVFTCGDNSSFCCGHR-DTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
           +   GQV++ G N+    G   DT R I  PRL+ ++      Q+ AG      LT  G 
Sbjct: 415 LTNWGQVYSWGSNAVGQLGQETDTTRQII-PRLIRSIAAKQVVQIAAGHYHCLALTNSGE 473

Query: 237 VHTCGSNTHGQLGHGDTLDR-PTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 295
           ++  GSN +GQLG G T ++  TP  +  L  V  +  IA G ++  AV+ +G ++ +G 
Sbjct: 474 LYAWGSNAYGQLGLGMTNEKVSTPTLVQSLAGV-PIAFIACGGNHSFAVSKSGAIFGWGK 532

Query: 296 GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGAL 355
            +   LG  + +    P  ++T R  G+    VS GD+  V L + G V+T G G  G L
Sbjct: 533 NTFGQLGLNDLNSRQFPTQLRTLRSLGVRY--VSCGDDFSVFLTAGGGVFTCGAGTFGQL 590

Query: 356 GHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDT-GSVYGFGWMGFGSLGFPDRGV 414
           GHG   ++ LP  +  L      Q+   +R T   V + G +YGFG  G G LG    G+
Sbjct: 591 GHGSCNNEILPRMVFELMGSKITQIACGRRHTLAFVPSRGKIYGFGLSGVGQLGI---GI 647

Query: 415 SDKVLRPRILDSLRAHHVSQIST 437
                 P+I   +R    SQI T
Sbjct: 648 VGNYNTPQI---VRGPWQSQILT 667



 Score =  108 bits (269), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 84/277 (30%), Positives = 135/277 (48%), Gaps = 9/277 (3%)

Query: 204 IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHG-DTLDRPTPKSI 262
           +  PR ++ +      +   G + T  LT  G +++CG+N HGQLGH  ++L    P+ +
Sbjct: 335 VMVPRKMDWMHAKEIARAACGASHTLLLTNDGKMYSCGNNDHGQLGHDVESLPNKRPQLL 394

Query: 263 APLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH-GEQHDELQPRAIQTFRRK 321
             LE    + Q   G ++ LA+T  G VYS+GS +   LG   +   ++ PR I++   K
Sbjct: 395 TALENY-IITQACCGTAHSLALTNWGQVYSWGSNAVGQLGQETDTTRQIIPRLIRSIAAK 453

Query: 322 GIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK-TLPEPLSSLKSHLAVQV 380
              VV+++AG  H +AL +SG +Y WG    G LG G   +K + P  + SL       +
Sbjct: 454 --QVVQIAAGHYHCLALTNSGELYAWGSNAYGQLGLGMTNEKVSTPTLVQSLAGVPIAFI 511

Query: 381 CARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLY 440
                 +F +  +G+++G+G   FG LG  D         P  L +LR+  V  +S G  
Sbjct: 512 ACGGNHSFAVSKSGAIFGWGKNTFGQLGLNDLNSRQ---FPTQLRTLRSLGVRYVSCGDD 568

Query: 441 HTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF 477
            +V +T  G +F  G     QLGH +    + P  +F
Sbjct: 569 FSVFLTAGGGVFTCGAGTFGQLGHGSCNNEILPRMVF 605



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 77/246 (31%), Positives = 124/246 (50%), Gaps = 5/246 (2%)

Query: 115 QITTGRYHTLLISN-SSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
           Q   G  H+L ++N   V+S GS+  G LG   +TT+ +    I   +A  VVQ++A   
Sbjct: 404 QACCGTAHSLALTNWGQVYSWGSNAVGQLGQETDTTRQIIPRLIRSIAAKQVVQIAAGHY 463

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
           H   +  SG+++  G N+    G   TN  +  P LV++L GVP   +  G N +  ++ 
Sbjct: 464 HCLALTNSGELYAWGSNAYGQLGLGMTNEKVSTPTLVQSLAGVPIAFIACGGNHSFAVSK 523

Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
            G +   G NT GQLG  D   R  P  +  L  +G V  ++ G  + + +T  G V++ 
Sbjct: 524 SGAIFGWGKNTFGQLGLNDLNSRQFPTQLRTLRSLG-VRYVSCGDDFSVFLTAGGGVFTC 582

Query: 294 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA-LDSSGYVYTWGKGYC 352
           G+G+   LGHG  ++E+ PR +  F   G  + +++ G  H +A + S G +Y +G    
Sbjct: 583 GAGTFGQLGHGSCNNEILPRMV--FELMGSKITQIACGRRHTLAFVPSRGKIYGFGLSGV 640

Query: 353 GALGHG 358
           G LG G
Sbjct: 641 GQLGIG 646



 Score = 85.1 bits (209), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 62/184 (33%), Positives = 95/184 (51%), Gaps = 6/184 (3%)

Query: 114 MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +QI  G YH L ++NS  +++ GS+  G LG G    +  + T +   +   +  ++   
Sbjct: 456 VQIAAGHYHCLALTNSGELYAWGSNAYGQLGLGMTNEKVSTPTLVQSLAGVPIAFIACGG 515

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
           NH+  V +SG +F  G N+    G  D N   F P  +  L+ +  + V+ G +F+ FLT
Sbjct: 516 NHSFAVSKSGAIFGWGKNTFGQLGLNDLNSRQF-PTQLRTLRSLGVRYVSCGDDFSVFLT 574

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS-VVQIAAGPSYMLA-VTGNGVV 290
             G V TCG+ T GQLGHG   +   P+ +   E +GS + QIA G  + LA V   G +
Sbjct: 575 AGGGVFTCGAGTFGQLGHGSCNNEILPRMV--FELMGSKITQIACGRRHTLAFVPSRGKI 632

Query: 291 YSFG 294
           Y FG
Sbjct: 633 YGFG 636


>gi|332218225|ref|XP_003258259.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
           [Nomascus leucogenys]
          Length = 1049

 Score =  129 bits (324), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 91/276 (32%), Positives = 142/276 (51%), Gaps = 10/276 (3%)

Query: 204 IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 263
           +  PR  +       + V  GL  T F+   G V+TCG N  GQLGH  +  R  P+ + 
Sbjct: 22  VLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKS--RKKPEQVV 79

Query: 264 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH-GEQHDELQPRAIQTFRRKG 322
            L+   ++V ++ G ++ LA+   G VY++G  S+  LG  G +     PR I++     
Sbjct: 80  ALD-AQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSL--SD 136

Query: 323 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK-TLPEPLSSLKSHLAVQVC 381
           I +V+V+ G  H +AL  +  V+ WG+   G LG G +  K T P+ L SL     +QV 
Sbjct: 137 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLVGIPFMQVA 196

Query: 382 ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYH 441
           A    +FVL  +G+++G+G   FG LG  D   +D+ + P +L SLR+  +  I  G  H
Sbjct: 197 AGGAHSFVLTLSGAIFGWGRNKFGQLGLNDE--NDRYV-PNLLKSLRSQKIVYICCGEDH 253

Query: 442 TVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF 477
           T  +T  G +F FG     QLGH++    + P ++F
Sbjct: 254 TAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVF 289



 Score =  122 bits (307), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 104/333 (31%), Positives = 153/333 (45%), Gaps = 13/333 (3%)

Query: 135 GSSLCGVLGHGPETTQCVSFTRI-NFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSF 193
           G++  G LG G    + V   R  +F     V  V     H  FVL  G V+TCG N   
Sbjct: 5   GNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLG 64

Query: 194 CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGH-GD 252
             GH  + +   +P  V AL       V+ G   T  L  +G V+  G ++ GQLG  G 
Sbjct: 65  QLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGS 121

Query: 253 TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ-HDELQ 311
                 P++I  L ++  +VQ+A G  + LA++    V+ +G      LG G     +  
Sbjct: 122 EECIRVPRNIKSLSDI-QIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTS 180

Query: 312 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSS 371
           P+ +++    GI  ++V+AG  H   L  SG ++ WG+   G LG  DE D+ +P  L S
Sbjct: 181 PQLLKSLV--GIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKS 238

Query: 372 LKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHH 431
           L+S   V +C  +  T  L   G V+ FG  G+G LG      +   + PR +  L    
Sbjct: 239 LRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG---HNSTSHEINPRKVFELMGSI 295

Query: 432 VSQISTGLYHT-VVVTDRGRLFGFGDNERAQLG 463
           V+QI+ G  HT   V   GR++ FG     QLG
Sbjct: 296 VTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 79/291 (27%), Positives = 138/291 (47%), Gaps = 8/291 (2%)

Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 179
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V VS  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVSCGEAHTLALN 100

Query: 180 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 239
             GQV+  G +S    G   +   I  PR +++L  +   QV  G   +  L+    V  
Sbjct: 101 DKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFC 160

Query: 240 CGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
            G N +GQLG G D   + +P+ +  L  +   +Q+AAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKYGQLGLGTDCKKQTSPQLLKSLVGI-PFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 299 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 358
             LG  +++D   P  +++ R + I  V +  G++H  AL   G V+T+G G  G LGH 
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRSQKI--VYICCGEDHTAALTKEGGVFTFGAGGYGQLGHN 277

Query: 359 DEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLG 408
               +  P  +  L   +  Q+ C R+  +  +  +G +Y FG  G G LG
Sbjct: 278 STSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 84/274 (30%), Positives = 132/274 (48%), Gaps = 10/274 (3%)

Query: 98  QSVEHSSDIVETSAGNM-QITTGRYHTLLISNS-SVFSCGSSLCGVLGH-GPETTQCVSF 154
           +S +    +V   A N+  ++ G  HTL +++   V++ G    G LG  G E  +C+  
Sbjct: 70  KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSE--ECIRV 127

Query: 155 TR-INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEAL 213
            R I   S   +VQV+    H+  + ++ +VF  G N     G     +    P+L+++L
Sbjct: 128 PRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSL 187

Query: 214 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
            G+P  QV AG   +  LT+ G +   G N  GQLG  D  DR  P  +  L     +V 
Sbjct: 188 VGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRS-QKIVY 246

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           I  G  +  A+T  G V++FG+G    LGH     E+ PR +  F   G  V +++ G +
Sbjct: 247 ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQ 304

Query: 334 HVVA-LDSSGYVYTWGKGYCGALGHGDEIDKTLP 366
           H  A + SSG +Y++G G  G LG G   ++  P
Sbjct: 305 HTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 76/251 (30%), Positives = 119/251 (47%), Gaps = 17/251 (6%)

Query: 70  IYA-GMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLISN 128
           +YA G+  + Q+ LL       +  +R  ++++  SDI       +Q+  G YH+L +S 
Sbjct: 105 VYAWGLDSDGQLGLLGS-----EECIRVPRNIKSLSDI-----QIVQVACGYYHSLALSK 154

Query: 129 SS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTC 187
           +S VF  G +  G LG G +  +  S   +        +QV+A   H+  +  SG +F  
Sbjct: 155 ASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLVGIPFMQVAAGGAHSFVLTLSGAIFGW 214

Query: 188 GDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQ 247
           G N     G  D N   + P L+++L+      +  G + T  LT  G V T G+  +GQ
Sbjct: 215 GRNKFGQLGLNDENDR-YVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQ 273

Query: 248 LGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVVYSFGSGSNFCLGHGE 305
           LGH  T     P+ +   E +GS+V QIA G  +  A V  +G +YSFG G N  LG G 
Sbjct: 274 LGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGS 331

Query: 306 QHDELQPRAIQ 316
             +   P  ++
Sbjct: 332 TSNRKSPFTVK 342


>gi|159488564|ref|XP_001702277.1| hypothetical protein CHLREDRAFT_122886 [Chlamydomonas reinhardtii]
 gi|158271254|gb|EDO97078.1| predicted protein [Chlamydomonas reinhardtii]
          Length = 376

 Score =  129 bits (324), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 96/303 (31%), Positives = 143/303 (47%), Gaps = 9/303 (2%)

Query: 163 AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 222
           A V+ VS   +H+  +L  G V + G       GH   ++    P  + AL       V 
Sbjct: 10  ARVLGVSCGSSHSIALLDCGVVASWGRGEDGQLGHGQADQ-CTSPTCIAALTDAGVDAVV 68

Query: 223 AGLNFT-GFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 281
            G  +T    + RG +++ G    G+LGHG+  D   P+ IA       V ++A G ++ 
Sbjct: 69  CGAEYTVAVASSRGQIYSWGWGDFGRLGHGECGDVFVPRPIAFFSGR-PVARVACGDTHT 127

Query: 282 LAVT-GNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 340
           L VT G+G +Y+FG   N  LG G  +D L P+ +     +G  V  V+ G EH +A   
Sbjct: 128 LVVTQGDGALYTFGRNQNGQLGLGHTNDCLSPQLVTAL--QGERVSSVACGSEHSLAATE 185

Query: 341 SGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 400
           +G V++WG G  G LG GD  D+  P  +  L       V    R + V+ D G V+ FG
Sbjct: 186 AGTVFSWGWGRYGNLGDGDSQDRYTPTRVVGLDGVTVTSVVCGWRHSAVVTDEGRVFTFG 245

Query: 401 WMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERA 460
           W  +G LG  D    D   RP ++  L+   VS ++ G  HT+     G L+ +G N+  
Sbjct: 246 WSKYGQLGHGDH--VDHT-RPCLVAGLQHCRVSTVAGGWRHTMAADSEGNLYAWGWNKFG 302

Query: 461 QLG 463
           QLG
Sbjct: 303 QLG 305



 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 110/366 (30%), Positives = 160/366 (43%), Gaps = 23/366 (6%)

Query: 114 MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHV-VQVSAS 171
           + ++ G  H++ L+    V S G    G LGHG +  QC S T I   + A V   V  +
Sbjct: 13  LGVSCGSSHSIALLDCGVVASWGRGEDGQLGHG-QADQCTSPTCIAALTDAGVDAVVCGA 71

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
           E   A     GQ+++ G       GH +    +F PR +    G P  +V  G   T  +
Sbjct: 72  EYTVAVASSRGQIYSWGWGDFGRLGHGECG-DVFVPRPIAFFSGRPVARVACGDTHTLVV 130

Query: 232 TI-RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 290
           T   G ++T G N +GQLG G T D  +P+ +  L+    V  +A G  + LA T  G V
Sbjct: 131 TQGDGALYTFGRNQNGQLGLGHTNDCLSPQLVTALQGE-RVSSVACGSEHSLAATEAGTV 189

Query: 291 YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKG 350
           +S+G G    LG G+  D   P  +      G+ V  V  G  H   +   G V+T+G  
Sbjct: 190 FSWGWGRYGNLGDGDSQDRYTPTRVVGL--DGVTVTSVVCGWRHSAVVTDEGRVFTFGWS 247

Query: 351 YCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFP 410
             G LGHGD +D T P  ++ L+      V    R T      G++Y +GW  FG LG  
Sbjct: 248 KYGQLGHGDHVDHTRPCLVAGLQHCRVSTVAGGWRHTMAADSEGNLYAWGWNKFGQLGLG 307

Query: 411 DRGVSDKVLRPRILDSLRA------------HHVSQISTGLYHTVVVTDRGRLFGFGDNE 458
           D   S+    P  +                   V+ ++ G  HTV VT+ G ++ +G   
Sbjct: 308 D---SEDRAAPTPVAGFGLAGGGVEAGAATPRRVALLACGWRHTVAVTEAGEVYSWGRGV 364

Query: 459 RAQLGH 464
             QLGH
Sbjct: 365 NGQLGH 370



 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 93/308 (30%), Positives = 135/308 (43%), Gaps = 22/308 (7%)

Query: 109 TSAGNMQITTGRYHTLLISNS--SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVV 166
           T AG   +  G  +T+ +++S   ++S G    G LGHG E         I F S   V 
Sbjct: 60  TDAGVDAVVCGAEYTVAVASSRGQIYSWGWGDFGRLGHG-ECGDVFVPRPIAFFSGRPVA 118

Query: 167 QVSASENHAAFVLQ-SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 225
           +V+  + H   V Q  G ++T G N +   G   TN     P+LV AL+G     V  G 
Sbjct: 119 RVACGDTHTLVVTQGDGALYTFGRNQNGQLGLGHTN-DCLSPQLVTALQGERVSSVACGS 177

Query: 226 NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 285
             +   T  G V + G   +G LG GD+ DR TP  +  L+ V +V  +  G  +   VT
Sbjct: 178 EHSLAATEAGTVFSWGWGRYGNLGDGDSQDRYTPTRVVGLDGV-TVTSVVCGWRHSAVVT 236

Query: 286 GNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVY 345
             G V++FG      LGHG+  D  +P  +   +     V  V+ G  H +A DS G +Y
Sbjct: 237 DEGRVFTFGWSKYGQLGHGDHVDHTRPCLVAGLQH--CRVSTVAGGWRHTMAADSEGNLY 294

Query: 346 TWGKGYCGALGHGDEIDKTLPEPLSSLKS-------------HLAVQVCARKRKTFVLVD 392
            WG    G LG GD  D+  P P++                  +A+  C   R T  + +
Sbjct: 295 AWGWNKFGQLGLGDSEDRAAPTPVAGFGLAGGGVEAGAATPRRVALLACG-WRHTVAVTE 353

Query: 393 TGSVYGFG 400
            G VY +G
Sbjct: 354 AGEVYSWG 361



 Score = 95.9 bits (237), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 76/260 (29%), Positives = 118/260 (45%), Gaps = 15/260 (5%)

Query: 115 QITTGRYHTLLIS--NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           ++  G  HTL+++  + ++++ G +  G LG G  T  C+S   +       V  V+   
Sbjct: 119 RVACGDTHTLVVTQGDGALYTFGRNQNGQLGLG-HTNDCLSPQLVTALQGERVSSVACGS 177

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            H+    ++G VF+ G       G  D+ +  + P  V  L GV    V  G   +  +T
Sbjct: 178 EHSLAATEAGTVFSWGWGRYGNLGDGDS-QDRYTPTRVVGLDGVTVTSVVCGWRHSAVVT 236

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
             G V T G + +GQLGHGD +D   P  +A L+    V  +A G  + +A    G +Y+
Sbjct: 237 DEGRVFTFGWSKYGQLGHGDHVDHTRPCLVAGLQHC-RVSTVAGGWRHTMAADSEGNLYA 295

Query: 293 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGI----------HVVRVSAGDEHVVALDSSG 342
           +G      LG G+  D   P  +  F   G            V  ++ G  H VA+  +G
Sbjct: 296 WGWNKFGQLGLGDSEDRAAPTPVAGFGLAGGGVEAGAATPRRVALLACGWRHTVAVTEAG 355

Query: 343 YVYTWGKGYCGALGHGDEID 362
            VY+WG+G  G LGHG E D
Sbjct: 356 EVYSWGRGVNGQLGHGAEQD 375



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 64/213 (30%), Positives = 103/213 (48%), Gaps = 7/213 (3%)

Query: 266 EEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHV 325
           +E   V+ ++ G S+ +A+   GVV S+G G +  LGHG+      P  I      G+  
Sbjct: 7   QEEARVLGVSCGSSHSIALLDCGVVASWGRGEDGQLGHGQADQCTSPTCIAALTDAGVDA 66

Query: 326 VRVSAGDEHVVALDSS-GYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARK 384
           V   A  E+ VA+ SS G +Y+WG G  G LGHG+  D  +P P++        +V    
Sbjct: 67  VVCGA--EYTVAVASSRGQIYSWGWGDFGRLGHGECGDVFVPRPIAFFSGRPVARVACGD 124

Query: 385 RKTFVLVD-TGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV 443
             T V+    G++Y FG    G LG    G ++  L P+++ +L+   VS ++ G  H++
Sbjct: 125 THTLVVTQGDGALYTFGRNQNGQLGL---GHTNDCLSPQLVTALQGERVSSVACGSEHSL 181

Query: 444 VVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 476
             T+ G +F +G      LG    +    PT +
Sbjct: 182 AATEAGTVFSWGWGRYGNLGDGDSQDRYTPTRV 214



 Score = 79.0 bits (193), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 55/166 (33%), Positives = 80/166 (48%), Gaps = 5/166 (3%)

Query: 325 VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSL-KSHLAVQVCAR 383
           V+ VS G  H +AL   G V +WG+G  G LGHG     T P  +++L  + +   VC  
Sbjct: 12  VLGVSCGSSHSIALLDCGVVASWGRGEDGQLGHGQADQCTSPTCIAALTDAGVDAVVCGA 71

Query: 384 KRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV 443
           +    V    G +Y +GW  FG LG  + G    V  PR +       V++++ G  HT+
Sbjct: 72  EYTVAVASSRGQIYSWGWGDFGRLGHGECG---DVFVPRPIAFFSGRPVARVACGDTHTL 128

Query: 444 VVTD-RGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQEMEEDTGLA 488
           VVT   G L+ FG N+  QLG      CL P  +   + E  + +A
Sbjct: 129 VVTQGDGALYTFGRNQNGQLGLGHTNDCLSPQLVTALQGERVSSVA 174


>gi|55832181|gb|AAV66579.1| HECT and RCC1 containing protein 4 isoform 3 [Homo sapiens]
          Length = 979

 Score =  129 bits (324), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 91/276 (32%), Positives = 142/276 (51%), Gaps = 10/276 (3%)

Query: 204 IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 263
           +  PR  +       + V  GL  T F+   G V+TCG N  GQLGH  +  R  P+ + 
Sbjct: 22  VLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKS--RKKPEQVV 79

Query: 264 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH-GEQHDELQPRAIQTFRRKG 322
            L+   ++V ++ G ++ LA+   G VY++G  S+  LG  G +     PR I++     
Sbjct: 80  ALD-AQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSL--SD 136

Query: 323 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK-TLPEPLSSLKSHLAVQVC 381
           I +V+V+ G  H +AL  +  V+ WG+   G LG G +  K T P+ L SL     +QV 
Sbjct: 137 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVA 196

Query: 382 ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYH 441
           A    +FVL  +G+++G+G   FG LG  D   +D+ + P +L SLR+  +  I  G  H
Sbjct: 197 AGGAHSFVLTLSGAIFGWGRNKFGQLGLNDE--NDRYV-PNLLKSLRSQKIVYICCGEDH 253

Query: 442 TVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF 477
           T  +T  G +F FG     QLGH++    + P ++F
Sbjct: 254 TAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVF 289



 Score =  122 bits (305), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 103/333 (30%), Positives = 153/333 (45%), Gaps = 13/333 (3%)

Query: 135 GSSLCGVLGHGPETTQCVSFTRI-NFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSF 193
           G++  G LG G    + V   R  +F     V  V     H  FVL  G V+TCG N   
Sbjct: 5   GNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGCNDLG 64

Query: 194 CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGH-GD 252
             GH  + +   +P  V AL       V+ G   T  L  +G V+  G ++ GQLG  G 
Sbjct: 65  QLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGS 121

Query: 253 TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ-HDELQ 311
                 P++I  L ++  +VQ+A G  + LA++    V+ +G      LG G     +  
Sbjct: 122 EECIRVPRNIKSLSDI-QIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTS 180

Query: 312 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSS 371
           P+ +++    GI  ++V+AG  H   L  SG ++ WG+   G LG  DE D+ +P  L S
Sbjct: 181 PQLLKSLL--GIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKS 238

Query: 372 LKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHH 431
           L+S   V +C  +  T  L   G V+ FG  G+G LG      +   + PR +  L    
Sbjct: 239 LRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG---HNSTSHEINPRKVFELMGSI 295

Query: 432 VSQISTGLYHT-VVVTDRGRLFGFGDNERAQLG 463
           V++I+ G  HT   V   GR++ FG     QLG
Sbjct: 296 VTEIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  108 bits (269), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 78/291 (26%), Positives = 138/291 (47%), Gaps = 8/291 (2%)

Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 179
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V VS  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVSCGEAHTLALN 100

Query: 180 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 239
             GQV+  G +S    G   +   I  PR +++L  +   QV  G   +  L+    V  
Sbjct: 101 DKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFC 160

Query: 240 CGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
            G N +GQLG G D   + +P+ +  L  +   +Q+AAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKYGQLGLGTDCKKQTSPQLLKSLLGI-PFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 299 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 358
             LG  +++D   P  +++ R + I  V +  G++H  AL   G V+T+G G  G LGH 
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRSQKI--VYICCGEDHTAALTKEGGVFTFGAGGYGQLGHN 277

Query: 359 DEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLG 408
               +  P  +  L   +  ++ C R+  +  +  +G +Y FG  G G LG
Sbjct: 278 STSHEINPRKVFELMGSIVTEIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 84/274 (30%), Positives = 131/274 (47%), Gaps = 10/274 (3%)

Query: 98  QSVEHSSDIVETSAGNM-QITTGRYHTLLISNS-SVFSCGSSLCGVLGH-GPETTQCVSF 154
           +S +    +V   A N+  ++ G  HTL +++   V++ G    G LG  G E  +C+  
Sbjct: 70  KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGSE--ECIRV 127

Query: 155 TR-INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEAL 213
            R I   S   +VQV+    H+  + ++ +VF  G N     G     +    P+L+++L
Sbjct: 128 PRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSL 187

Query: 214 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
            G+P  QV AG   +  LT+ G +   G N  GQLG  D  DR  P  +  L     +V 
Sbjct: 188 LGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRS-QKIVY 246

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           I  G  +  A+T  G V++FG+G    LGH     E+ PR +  F   G  V  ++ G +
Sbjct: 247 ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTEIACGRQ 304

Query: 334 HVVA-LDSSGYVYTWGKGYCGALGHGDEIDKTLP 366
           H  A + SSG +Y++G G  G LG G   ++  P
Sbjct: 305 HTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338



 Score = 79.0 bits (193), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 65/206 (31%), Positives = 99/206 (48%), Gaps = 6/206 (2%)

Query: 114 MQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +Q+  G YH+L +S +S VF  G +  G LG G +  +  S   +        +QV+A  
Sbjct: 140 VQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGG 199

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            H+  +  SG +F  G N     G  D N   + P L+++L+      +  G + T  LT
Sbjct: 200 AHSFVLTLSGAIFGWGRNKFGQLGLNDENDR-YVPNLLKSLRSQKIVYICCGEDHTAALT 258

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVV 290
             G V T G+  +GQLGH  T     P+ +   E +GS+V +IA G  +  A V  +G +
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTEIACGRQHTSAFVPSSGRI 316

Query: 291 YSFGSGSNFCLGHGEQHDELQPRAIQ 316
           YSFG G N  LG G   +   P  ++
Sbjct: 317 YSFGLGGNGQLGTGSTSNRKSPFTVK 342


>gi|390359737|ref|XP_003729552.1| PREDICTED: E3 ubiquitin-protein ligase HERC2, partial
            [Strongylocentrotus purpuratus]
          Length = 4064

 Score =  129 bits (324), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 99/348 (28%), Positives = 166/348 (47%), Gaps = 12/348 (3%)

Query: 130  SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGD 189
            +++  G +  G LG G E  +    T I   ++   +Q+   E     V   G+++  G 
Sbjct: 3182 TIYGWGHNHRGQLG-GIEGAKVKVPTAIESLTSLRPIQIVGGEQTLFAVTADGKLYATGY 3240

Query: 190  NSSFCCGHRDTNRPIFRPRLVEALKGVPCKQV--TAGLNFTGFLTIRGHVHTCGSNTHGQ 247
             +S   G   T+  +  P L+E+++ V  K+V   +G      L++ G V++ G    G+
Sbjct: 3241 GASGRLGIGGTDS-VSTPTLLESIQHVHIKKVAVNSGGKHALALSVEGEVYSWGEGEDGK 3299

Query: 248  LGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH 307
            LGHG+      P+ I  L     V+ IA G ++   VT +G +Y++G G    LGHG+  
Sbjct: 3300 LGHGNRTQCDRPRVIESLRG-KEVIDIACGGAHSACVTSSGELYTWGKGRYGRLGHGDSE 3358

Query: 308  DELQPRAIQTFRRKGIHVVRVS--AGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTL 365
            D+L+P+       KG  V+ V+  +GD   + +     V++WG G  G LG G      +
Sbjct: 3359 DQLRPKMADAL--KGYRVIDVACGSGDSQTLCISDDDNVWSWGDGDYGKLGRGGSDGCKV 3416

Query: 366  PEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILD 425
            P+ + +L S    +V    + +  L  +G VY +G   +  LG    G  D V RPR + 
Sbjct: 3417 PQKVDALSSIGVCKVECGSQFSIALTKSGCVYTWGKGDYHRLG---HGSDDHVRRPRKVA 3473

Query: 426  SLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEP 473
            +L+   +  I+TG  H V  +D+G ++ +GDN+  QLG  T      P
Sbjct: 3474 ALQGKKIISIATGSLHCVACSDQGEVYTWGDNDEGQLGDGTTNAIQRP 3521



 Score =  122 bits (307), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 94/303 (31%), Positives = 150/303 (49%), Gaps = 10/303 (3%)

Query: 167  QVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN 226
            Q SA ++  +  +Q+ +VF  G N     G    ++ I  P L E L  +       G  
Sbjct: 2192 QRSAGDHGGSREIQT-KVFVWGLNDKDQLGGPRGSK-IKTPVLNEFLSSLKVVCCAGGSK 2249

Query: 227  FTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEE-VGSVVQIAAGPSYMLAVT 285
                +T  G V+ CG  T+G+LG G + +   PK +  L + V   V + +G  + +A+T
Sbjct: 2250 SLFVVTAEGKVYACGEGTNGRLGLGSSQNVDIPKQVNGLSQYVVKKVAVHSGGRHAMALT 2309

Query: 286  GNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVY 345
             +G V+S+G G +  LGH  + +  +PR ++  + K I    ++ G  H  A+ SSG +Y
Sbjct: 2310 VDGKVFSWGEGDDGKLGHLSRMNCEKPRLLEALKTKRIR--DIACGSSHSAAVTSSGELY 2367

Query: 346  TWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVC--ARKRKTFVLVDTGSVYGFGWMG 403
            TWG G  G LGHGD   +  P+ + +L     +QV   +R  +T  L D G VY +G   
Sbjct: 2368 TWGLGEYGRLGHGDSTTQLRPKLVKALVGKRVIQVACGSRDAQTLTLTDEGMVYSWGDGD 2427

Query: 404  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 463
            FG LG   RG S+    P  ++ L    V QI  G   ++ +T  G+++ +G  +  +LG
Sbjct: 2428 FGKLG---RGGSEGCSVPHNVERLNGQGVIQIECGAQFSLALTKAGQVWTWGKGDYFRLG 2484

Query: 464  HDT 466
            H T
Sbjct: 2485 HGT 2487



 Score =  121 bits (303), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 90/338 (26%), Positives = 156/338 (46%), Gaps = 8/338 (2%)

Query: 128  NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTC 187
             + VF  G +    LG GP  ++  +     F S+  VV  +        V   G+V+ C
Sbjct: 2205 QTKVFVWGLNDKDQLG-GPRGSKIKTPVLNEFLSSLKVVCCAGGSKSLFVVTAEGKVYAC 2263

Query: 188  GDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT--AGLNFTGFLTIRGHVHTCGSNTH 245
            G+ ++   G   +++ +  P+ V  L     K+V   +G      LT+ G V + G    
Sbjct: 2264 GEGTNGRLG-LGSSQNVDIPKQVNGLSQYVVKKVAVHSGGRHAMALTVDGKVFSWGEGDD 2322

Query: 246  GQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGE 305
            G+LGH   ++   P+ +  L+    +  IA G S+  AVT +G +Y++G G    LGHG+
Sbjct: 2323 GKLGHLSRMNCEKPRLLEALK-TKRIRDIACGSSHSAAVTSSGELYTWGLGEYGRLGHGD 2381

Query: 306  QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTL 365
               +L+P+ ++    K +  V   + D   + L   G VY+WG G  G LG G     ++
Sbjct: 2382 STTQLRPKLVKALVGKRVIQVACGSRDAQTLTLTDEGMVYSWGDGDFGKLGRGGSEGCSV 2441

Query: 366  PEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILD 425
            P  +  L     +Q+    + +  L   G V+ +G   +  LG    G    V +P++ +
Sbjct: 2442 PHNVERLNGQGVIQIECGAQFSLALTKAGQVWTWGKGDYFRLG---HGTDSHVRKPQVAE 2498

Query: 426  SLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 463
             L+   +  ++ G  H + VTD G++F +GDN+  Q G
Sbjct: 2499 GLKGKKIIHVAVGALHCLAVTDTGQVFAWGDNDHGQQG 2536



 Score =  118 bits (295), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 99/343 (28%), Positives = 160/343 (46%), Gaps = 17/343 (4%)

Query: 109  TSAGNMQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHV-- 165
            TS   +QI  G      ++ +  +++ G    G LG G   T  VS T     S  HV  
Sbjct: 3212 TSLRPIQIVGGEQTLFAVTADGKLYATGYGASGRLGIG--GTDSVS-TPTLLESIQHVHI 3268

Query: 166  --VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTA 223
              V V++   HA  +   G+V++ G+      GH +  +   RPR++E+L+G     +  
Sbjct: 3269 KKVAVNSGGKHALALSVEGEVYSWGEGEDGKLGHGNRTQ-CDRPRVIESLRGKEVIDIAC 3327

Query: 224  GLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA--AGPSYM 281
            G   +  +T  G ++T G   +G+LGHGD+ D+  PK    L+    V+ +A  +G S  
Sbjct: 3328 GGAHSACVTSSGELYTWGKGRYGRLGHGDSEDQLRPKMADALKGY-RVIDVACGSGDSQT 3386

Query: 282  LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 341
            L ++ +  V+S+G G    LG G       P+ +       I V +V  G +  +AL  S
Sbjct: 3387 LCISDDDNVWSWGDGDYGKLGRGGSDGCKVPQKVDAL--SSIGVCKVECGSQFSIALTKS 3444

Query: 342  GYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGW 401
            G VYTWGKG    LGHG +     P  +++L+    + +           D G VY +G 
Sbjct: 3445 GCVYTWGKGDYHRLGHGSDDHVRRPRKVAALQGKKIISIATGSLHCVACSDQGEVYTWGD 3504

Query: 402  MGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV 444
               G LG    G ++ + RPRI+ +L+   ++ ++ G  HTV 
Sbjct: 3505 NDEGQLG---DGTTNAIQRPRIVTALQDKKITNVACGSAHTVA 3544



 Score =  112 bits (280), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 93/325 (28%), Positives = 154/325 (47%), Gaps = 16/325 (4%)

Query: 124  LLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ---VSASENHAAFVLQ 180
            ++ +   V++CG    G LG G  ++Q V   +     + +VV+   V +   HA  +  
Sbjct: 2253 VVTAEGKVYACGEGTNGRLGLG--SSQNVDIPKQVNGLSQYVVKKVAVHSGGRHAMALTV 2310

Query: 181  SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTC 240
             G+VF+ G+      GH  +     +PRL+EALK    + +  G + +  +T  G ++T 
Sbjct: 2311 DGKVFSWGEGDDGKLGHL-SRMNCEKPRLLEALKTKRIRDIACGSSHSAAVTSSGELYTW 2369

Query: 241  GSNTHGQLGHGDTLDRPTPKSIAPLEEVGS-VVQIAAGP--SYMLAVTGNGVVYSFGSGS 297
            G   +G+LGHGD+  +  PK +  L  VG  V+Q+A G   +  L +T  G+VYS+G G 
Sbjct: 2370 GLGEYGRLGHGDSTTQLRPKLVKAL--VGKRVIQVACGSRDAQTLTLTDEGMVYSWGDGD 2427

Query: 298  NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 357
               LG G       P  ++  R  G  V+++  G +  +AL  +G V+TWGKG    LGH
Sbjct: 2428 FGKLGRGGSEGCSVPHNVE--RLNGQGVIQIECGAQFSLALTKAGQVWTWGKGDYFRLGH 2485

Query: 358  GDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDK 417
            G +     P+    LK    + V         + DTG V+ +G    G  G     V+ K
Sbjct: 2486 GTDSHVRKPQVAEGLKGKKIIHVAVGALHCLAVTDTGQVFAWGDNDHGQQGDGSTTVNKK 2545

Query: 418  VLRPRILDSLRAHHVSQISTGLYHT 442
               P ++  L    +++++ G  H+
Sbjct: 2546 ---PALVQGLEGVRITRVACGSSHS 2567



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 69/244 (28%), Positives = 121/244 (49%), Gaps = 6/244 (2%)

Query: 235  GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 294
            G ++  G N  GQLG  +      P +I  L  +   +QI  G   + AVT +G +Y+ G
Sbjct: 3181 GTIYGWGHNHRGQLGGIEGAKVKVPTAIESLTSL-RPIQIVGGEQTLFAVTADGKLYATG 3239

Query: 295  SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGA 354
             G++  LG G       P  +++ +   I  V V++G +H +AL   G VY+WG+G  G 
Sbjct: 3240 YGASGRLGIGGTDSVSTPTLLESIQHVHIKKVAVNSGGKHALALSVEGEVYSWGEGEDGK 3299

Query: 355  LGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGV 414
            LGHG+      P  + SL+    + +      +  +  +G +Y +G   +G LG    G 
Sbjct: 3300 LGHGNRTQCDRPRVIESLRGKEVIDIACGGAHSACVTSSGELYTWGKGRYGRLG---HGD 3356

Query: 415  SDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLE 472
            S+  LRP++ D+L+ + V  ++  +G   T+ ++D   ++ +GD +  +LG     GC  
Sbjct: 3357 SEDQLRPKMADALKGYRVIDVACGSGDSQTLCISDDDNVWSWGDGDYGKLGRGGSDGCKV 3416

Query: 473  PTEI 476
            P ++
Sbjct: 3417 PQKV 3420



 Score = 96.3 bits (238), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 75/262 (28%), Positives = 120/262 (45%), Gaps = 17/262 (6%)

Query: 219  KQVTAGLNFTGFLTIRGHVHTCGSNTHGQLG--HGDTLDRPTPKSIAPLEEVGSVVQI-- 274
            +Q +AG +  G   I+  V   G N   QLG   G  +  P       L E  S +++  
Sbjct: 2191 RQRSAG-DHGGSREIQTKVFVWGLNDKDQLGGPRGSKIKTPV------LNEFLSSLKVVC 2243

Query: 275  -AAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
             A G   +  VT  G VY+ G G+N  LG G   +   P+ +    +  +  V V +G  
Sbjct: 2244 CAGGSKSLFVVTAEGKVYACGEGTNGRLGLGSSQNVDIPKQVNGLSQYVVKKVAVHSGGR 2303

Query: 334  HVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDT 393
            H +AL   G V++WG+G  G LGH   ++   P  L +LK+     +      +  +  +
Sbjct: 2304 HAMALTVDGKVFSWGEGDDGKLGHLSRMNCEKPRLLEALKTKRIRDIACGSSHSAAVTSS 2363

Query: 394  GSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLY--HTVVVTDRGRL 451
            G +Y +G   +G LG    G S   LRP+++ +L    V Q++ G     T+ +TD G +
Sbjct: 2364 GELYTWGLGEYGRLG---HGDSTTQLRPKLVKALVGKRVIQVACGSRDAQTLTLTDEGMV 2420

Query: 452  FGFGDNERAQLGHDTLRGCLEP 473
            + +GD +  +LG     GC  P
Sbjct: 2421 YSWGDGDFGKLGRGGSEGCSVP 2442



 Score = 65.1 bits (157), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 39/147 (26%), Positives = 72/147 (48%), Gaps = 5/147 (3%)

Query: 332  DEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 391
            D+  ++   SG +Y WG  + G LG  +     +P  + SL S   +Q+   ++  F + 
Sbjct: 3171 DDWTLSWGGSGTIYGWGHNHRGQLGGIEGAKVKVPTAIESLTSLRPIQIVGGEQTLFAVT 3230

Query: 392  DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRG 449
              G +Y  G+   G LG    G +D V  P +L+S++  H+ +++  +G  H + ++  G
Sbjct: 3231 ADGKLYATGYGASGRLGI---GGTDSVSTPTLLESIQHVHIKKVAVNSGGKHALALSVEG 3287

Query: 450  RLFGFGDNERAQLGHDTLRGCLEPTEI 476
             ++ +G+ E  +LGH     C  P  I
Sbjct: 3288 EVYSWGEGEDGKLGHGNRTQCDRPRVI 3314



 Score = 45.4 bits (106), Expect = 0.065,   Method: Compositional matrix adjust.
 Identities = 25/97 (25%), Positives = 47/97 (48%), Gaps = 3/97 (3%)

Query: 308 DELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPE 367
           D+L P+ +   + +    + + + D   +A+  +G ++++G G  G LG G      LP+
Sbjct: 4   DQLTPKLVSGLKEQKFVHIALGSNDGQTLAVTDTGLLFSFGNGDYGKLGRGGSDGCKLPK 63

Query: 368 PLSSLKSHLAVQVCARKRKTFVLVDTGSVY---GFGW 401
            +  L+   AV  C   + + +L  TG+VY    F W
Sbjct: 64  LVDKLQGQHAVIACCGNQFSVILTKTGTVYTCLTFAW 100



 Score = 42.4 bits (98), Expect = 0.54,   Method: Compositional matrix adjust.
 Identities = 33/94 (35%), Positives = 48/94 (51%), Gaps = 5/94 (5%)

Query: 255 DRPTPKSIAPLEEVGSVVQIAAGPS--YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQP 312
           D+ TPK ++ L+E    V IA G +    LAVT  G+++SFG+G    LG G       P
Sbjct: 4   DQLTPKLVSGLKE-QKFVHIALGSNDGQTLAVTDTGLLFSFGNGDYGKLGRGGSDGCKLP 62

Query: 313 RAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYT 346
           + +     +G H V    G++  V L  +G VYT
Sbjct: 63  KLVDKL--QGQHAVIACCGNQFSVILTKTGTVYT 94



 Score = 41.6 bits (96), Expect = 0.83,   Method: Compositional matrix adjust.
 Identities = 27/93 (29%), Positives = 46/93 (49%), Gaps = 5/93 (5%)

Query: 362 DKTLPEPLSSLKSHLAVQVC--ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVL 419
           D+  P+ +S LK    V +   +   +T  + DTG ++ FG   +G LG   RG SD   
Sbjct: 4   DQLTPKLVSGLKEQKFVHIALGSNDGQTLAVTDTGLLFSFGNGDYGKLG---RGGSDGCK 60

Query: 420 RPRILDSLRAHHVSQISTGLYHTVVVTDRGRLF 452
            P+++D L+  H      G   +V++T  G ++
Sbjct: 61  LPKLVDKLQGQHAVIACCGNQFSVILTKTGTVY 93


>gi|356526924|ref|XP_003532065.1| PREDICTED: uncharacterized protein LOC100797527 [Glycine max]
          Length = 1099

 Score =  129 bits (324), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 102/316 (32%), Positives = 151/316 (47%), Gaps = 24/316 (7%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVPCKQVTA 223
           V  ++    HAA V + G+VF+ G  S    GH  D++ P   P+L+E+L     + V  
Sbjct: 307 VQNIACGGEHAAMVTKQGEVFSWGGESGGRLGHGVDSDVP--HPKLIESLSNTNIELVAC 364

Query: 224 GLNFTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSI-APLEEVGSVVQIAAGPSY 280
           G   T  +T+ G ++T G  T+  G LGHG+ +    PK +  PLE +  V  I+ GP +
Sbjct: 365 GEYHTCAVTLSGDLYTWGDGTYNYGLLGHGNQVSHWVPKRVNGPLEGI-HVSSISCGPWH 423

Query: 281 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL-- 338
              VT +G +++FG G+   LGHG++     PR I++   KG+  V+ + G  H  A+  
Sbjct: 424 TAVVTSSGQLFTFGDGTFGVLGHGDRKSVSLPREIESL--KGLRTVQAACGVWHTAAVVE 481

Query: 339 ----------DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTF 388
                      SSG ++TWG G  G LGHGD+  K +P  + +L      QV      T 
Sbjct: 482 VMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKESKLVPTRVVTLDEPNFCQVACGHSMTV 541

Query: 389 VLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDR 448
            L   G VY  G   +G LG      +D  L   +   L    V +I+ G YH  V+T R
Sbjct: 542 ALSRLGHVYTMGSCVYGHLG---NTQADGKLPTPVEGKLSKSFVEEIACGAYHVAVLTSR 598

Query: 449 GRLFGFGDNERAQLGH 464
             +F +G      LGH
Sbjct: 599 TEVFTWGKGANGCLGH 614



 Score =  113 bits (282), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 95/291 (32%), Positives = 136/291 (46%), Gaps = 22/291 (7%)

Query: 100 VEHSSDIVETSAGNMQ-ITTGRYHTLLISNSS---VFSCGSSLCGVLGHGPETTQCVSFT 155
           V H   I   S  N++ +  G YHT  ++ S     +  G+   G+LGHG + +  V   
Sbjct: 345 VPHPKLIESLSNTNIELVACGEYHTCAVTLSGDLYTWGDGTYNYGLLGHGNQVSHWVP-K 403

Query: 156 RINFP-SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALK 214
           R+N P    HV  +S    H A V  SGQ+FT GD +    GH D  + +  PR +E+LK
Sbjct: 404 RVNGPLEGIHVSSISCGPWHTAVVTSSGQLFTFGDGTFGVLGHGD-RKSVSLPREIESLK 462

Query: 215 GVPCKQVTAGLNFTGFLT------------IRGHVHTCGSNTHGQLGHGDTLDRPTPKSI 262
           G+   Q   G+  T  +               G + T G    G+LGHGD   +  P  +
Sbjct: 463 GLRTVQAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKESKLVPTRV 522

Query: 263 APLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKG 322
             L+E  +  Q+A G S  +A++  G VY+ GS     LG+  Q D   P  ++    K 
Sbjct: 523 VTLDEP-NFCQVACGHSMTVALSRLGHVYTMGSCVYGHLGN-TQADGKLPTPVEGKLSKS 580

Query: 323 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
             V  ++ G  HV  L S   V+TWGKG  G LGHGD  D+  P  + +LK
Sbjct: 581 F-VEEIACGAYHVAVLTSRTEVFTWGKGANGCLGHGDTNDRNTPTLVEALK 630



 Score = 98.2 bits (243), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 85/296 (28%), Positives = 137/296 (46%), Gaps = 27/296 (9%)

Query: 207 PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 266
           P+ +E+   +  + +  G      +T +G V + G  + G+LGHG   D P PK I  L 
Sbjct: 296 PKALESAVVLDVQNIACGGEHAAMVTKQGEVFSWGGESGGRLGHGVDSDVPHPKLIESLS 355

Query: 267 EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS-NF-CLGHGEQHDELQPRAIQTFRRKGIH 324
              ++  +A G  +  AVT +G +Y++G G+ N+  LGHG Q     P+ +     +GIH
Sbjct: 356 NT-NIELVACGEYHTCAVTLSGDLYTWGDGTYNYGLLGHGNQVSHWVPKRVNG-PLEGIH 413

Query: 325 VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARK 384
           V  +S G  H   + SSG ++T+G G  G LGHGD    +LP  + SLK    VQ     
Sbjct: 414 VSSISCGPWHTAVVTSSGQLFTFGDGTFGVLGHGDRKSVSLPREIESLKGLRTVQAACGV 473

Query: 385 RKTFVLVDT------------GSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHV 432
             T  +V+             G ++ +G    G LG  D+   +  L P  + +L   + 
Sbjct: 474 WHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDK---ESKLVPTRVVTLDEPNF 530

Query: 433 SQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI-------FIQEM 481
            Q++ G   TV ++  G ++  G      LG+    G L PT +       F++E+
Sbjct: 531 CQVACGHSMTVALSRLGHVYTMGSCVYGHLGNTQADGKL-PTPVEGKLSKSFVEEI 585



 Score = 45.8 bits (107), Expect = 0.044,   Method: Compositional matrix adjust.
 Identities = 37/124 (29%), Positives = 57/124 (45%), Gaps = 3/124 (2%)

Query: 115 QITTGRYHTLLISN-SSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
           Q+  G   T+ +S    V++ GS + G LG+     +  +       S + V +++    
Sbjct: 532 QVACGHSMTVALSRLGHVYTMGSCVYGHLGNTQADGKLPTPVEGKL-SKSFVEEIACGAY 590

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
           H A +    +VFT G  ++ C GH DTN     P LVEALK    K +  G NFT  + +
Sbjct: 591 HVAVLTSRTEVFTWGKGANGCLGHGDTND-RNTPTLVEALKDKQVKSIACGTNFTAAICL 649

Query: 234 RGHV 237
              V
Sbjct: 650 HKWV 653


>gi|229576496|gb|ACQ82638.1| At3g15430-like protein [Solanum hirtum]
          Length = 91

 Score =  129 bits (324), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 61/90 (67%), Positives = 72/90 (80%)

Query: 24  SGRLSAVDLAHLELTSKTFGGSHGLYPQKFRSLVDLAASQLCALHSIYAGMSRNVQIELL 83
           SGRL+ +DL  LELTS+TF G+HGL+P+KF+SLVD AA QLC    IYA +  N Q ELL
Sbjct: 2   SGRLAGIDLISLELTSRTFRGTHGLFPKKFKSLVDYAAFQLCXXSPIYASLHCNAQEELL 61

Query: 84  NRCNGNWKRVLRFLQSVEHSSDIVETSAGN 113
            RCN NWKR+LRFLQ+VE SSD+VETSAGN
Sbjct: 62  KRCNXNWKRLLRFLQAVEQSSDMVETSAGN 91


>gi|170050907|ref|XP_001861523.1| hect E3 ubiquitin ligase [Culex quinquefasciatus]
 gi|167872400|gb|EDS35783.1| hect E3 ubiquitin ligase [Culex quinquefasciatus]
          Length = 4784

 Score =  129 bits (324), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 82/245 (33%), Positives = 133/245 (54%), Gaps = 8/245 (3%)

Query: 235  GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEE-VGSVVQIAAGPSYMLAVTGNGVVYSF 293
            G ++ CG  T+G+LG G   + PTP+ +  L + V   V + +G  + +A+T +G V+S+
Sbjct: 2959 GKLYACGEGTNGRLGLGHNNNVPTPRQVPILNQYVVKKVAVHSGGKHAMALTLDGKVFSW 3018

Query: 294  GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 353
            G G +  LGHG +    +P+ +++ R K I    ++ G  H  A+ SSG +YTWG G  G
Sbjct: 3019 GEGEDGKLGHGNRVTLEKPKLLESLRTKRIR--DIACGSSHSAAITSSGELYTWGLGEYG 3076

Query: 354  ALGHGDEIDKTLPEPLSSLKSHLAVQVC--ARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 411
             LGHGD   +  P+ +++L+ H  VQV   +R  +T  L + G V+ +G   FG LG   
Sbjct: 3077 RLGHGDNCTQLKPKLVTALQGHRVVQVACGSRDAQTLCLTEEGLVFSWGDGDFGKLG--- 3133

Query: 412  RGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCL 471
            RG S+    P  ++ L    V QI  G   ++ +T  G ++ +G  +  +LGH T +   
Sbjct: 3134 RGGSEGCSVPHQVERLNGVGVVQIECGAQFSLALTKIGEVWTWGKGDYYRLGHGTDQHVR 3193

Query: 472  EPTEI 476
            +PT I
Sbjct: 3194 KPTPI 3198



 Score =  125 bits (315), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 93/312 (29%), Positives = 150/312 (48%), Gaps = 20/312 (6%)

Query: 153 SFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEA 212
           S   I  P +  V QV+ +EN    V  SGQ+++     S C            P+LVE 
Sbjct: 524 STATIELPPSLQVRQVACTENSIYIVTTSGQLYSI---HSSCA-------ETVAPKLVEG 573

Query: 213 LKGVPCKQVTAGLN--FTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS 270
           L+GV   Q+ A         L+  G V++ G+   G+LGHGDT  +  P  IA LE+   
Sbjct: 574 LEGVSVIQIAAHCEGRHAMALSSAGEVYSWGAGEGGRLGHGDTASKEVPTKIA-LEK--Q 630

Query: 271 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 330
           V  I AG SY  AV+  G ++++G G+   LGHG   D+  P  +Q  +   +  V + +
Sbjct: 631 VTAIYAGASYSAAVSSVGELFTWGRGTYGRLGHGNSDDKFVPTQVQALKAYKVVDVALGS 690

Query: 331 GDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVL 390
           GD H +A+   G ++ WG G  G LG+G      LP  +  + S    ++ +  + +  L
Sbjct: 691 GDAHSMAVTDGGLLFAWGDGDFGKLGNGSCNGSPLPVQIEGVSS--VARIYSGSQFSVAL 748

Query: 391 VDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGR 450
              G++Y +G    G LG    G S+    P+++ +L    +  ++ G  H + +T  G 
Sbjct: 749 SYDGTLYSWGKGHGGRLG---HGNSEHSNVPKLVHALEGKKIVDVAVGSAHCLALTSSGE 805

Query: 451 LFGFGDNERAQL 462
           L+G+G N+  Q+
Sbjct: 806 LYGWGRNDYQQI 817



 Score =  125 bits (313), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 92/321 (28%), Positives = 148/321 (46%), Gaps = 21/321 (6%)

Query: 155  TRINFPSAAHV------VQVSASENHAAFVLQSGQVFTCGD--NSSFCCGHRDTNRPIFR 206
            +++  P+ + V      + +S        V Q G+++ CG+  N     GH   N  +  
Sbjct: 2926 SKVKLPTYSSVLSQLKPIHISGGSKSLFIVSQDGKLYACGEGTNGRLGLGH---NNNVPT 2982

Query: 207  PRLVEALKGVPCKQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP 264
            PR V  L     K+V   +G      LT+ G V + G    G+LGHG+ +    PK +  
Sbjct: 2983 PRQVPILNQYVVKKVAVHSGGKHAMALTLDGKVFSWGEGEDGKLGHGNRVTLEKPKLLES 3042

Query: 265  LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH 324
            L     +  IA G S+  A+T +G +Y++G G    LGHG+   +L+P+ +     +G  
Sbjct: 3043 LR-TKRIRDIACGSSHSAAITSSGELYTWGLGEYGRLGHGDNCTQLKPKLVTAL--QGHR 3099

Query: 325  VVRVSAG--DEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCA 382
            VV+V+ G  D   + L   G V++WG G  G LG G     ++P  +  L     VQ+  
Sbjct: 3100 VVQVACGSRDAQTLCLTEEGLVFSWGDGDFGKLGRGGSEGCSVPHQVERLNGVGVVQIEC 3159

Query: 383  RKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHT 442
              + +  L   G V+ +G   +  LG    G    V +P  +  LR   V  ++ G  H 
Sbjct: 3160 GAQFSLALTKIGEVWTWGKGDYYRLG---HGTDQHVRKPTPIQGLRGKKVIHVAVGALHC 3216

Query: 443  VVVTDRGRLFGFGDNERAQLG 463
            + VTD G++F +GDN+  Q G
Sbjct: 3217 LAVTDSGQVFAWGDNDHGQQG 3237



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 96/324 (29%), Positives = 147/324 (45%), Gaps = 40/324 (12%)

Query: 184  VFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 243
            +F  G N     G  D +R I  P   EAL  +   Q+  G      +T  G ++  G  
Sbjct: 3946 IFGWGHNHRGQLGGLDGSR-IKMPTPCEALSLLRPIQIAGGEQTLYAVTPDGKLYATGYG 4004

Query: 244  THGQLGHGDTLDRPTPKSIAPLEEVG-SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLG 302
              G+LG G T    TP  +  L+ V    V + +G  + LA++ +G V+S+G G +  LG
Sbjct: 4005 AGGRLGIGGTDSVSTPTLVESLQHVIIKKVAVNSGGKHCLALSSDGEVFSWGEGEDGKLG 4064

Query: 303  HGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEID 362
            HG +    +P+ I+     GI VV ++ G  H   + S G+V TWGKG  G LGHGD  D
Sbjct: 4065 HGNRDSYDRPKLIEAL--SGIGVVDIACGSAHSACITSQGHVLTWGKGRYGRLGHGDSED 4122

Query: 363  KTLPEP------------LSSLKSHLAVQVCARKRK---------------------TFV 389
            +  P+             ++++ + LA +V    R                      +  
Sbjct: 4123 QLQPKRCVLRTTIMCGVGVTAIMASLAEEVPMGARSPMKIESLAGLGVIKVECGSQFSVA 4182

Query: 390  LVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRG 449
            L  +GSVY +G   +  LG    G +D V RP+ + +L+   +  I+TG  H V  +D G
Sbjct: 4183 LTRSGSVYTWGKGDYHRLG---HGNTDHVRRPKKVAALQGKKIISIATGSLHCVACSDSG 4239

Query: 450  RLFGFGDNERAQLGHDTLRGCLEP 473
             +F +GDN+  QLG  T+     P
Sbjct: 4240 EVFTWGDNDEGQLGDGTVTAIQRP 4263



 Score =  109 bits (273), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 93/333 (27%), Positives = 148/333 (44%), Gaps = 48/333 (14%)

Query: 155  TRINFPSAAHV------VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPR 208
            +RI  P+          +Q++  E     V   G+++  G  +    G   T+  +  P 
Sbjct: 3963 SRIKMPTPCEALSLLRPIQIAGGEQTLYAVTPDGKLYATGYGAGGRLGIGGTDS-VSTPT 4021

Query: 209  LVEALKGVPCKQV--TAGLNFTGFLTIRGHVHTCGSNTHGQLGHG--DTLDRPTPKSIAP 264
            LVE+L+ V  K+V   +G      L+  G V + G    G+LGHG  D+ DRP  K I  
Sbjct: 4022 LVESLQHVIIKKVAVNSGGKHCLALSSDGEVFSWGEGEDGKLGHGNRDSYDRP--KLIEA 4079

Query: 265  LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPR----------- 313
            L  +G VV IA G ++   +T  G V ++G G    LGHG+  D+LQP+           
Sbjct: 4080 LSGIG-VVDIACGSAHSACITSQGHVLTWGKGRYGRLGHGDSEDQLQPKRCVLRTTIMCG 4138

Query: 314  --------------------AIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 353
                                 ++     G+ V++V  G +  VAL  SG VYTWGKG   
Sbjct: 4139 VGVTAIMASLAEEVPMGARSPMKIESLAGLGVIKVECGSQFSVALTRSGSVYTWGKGDYH 4198

Query: 354  ALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRG 413
             LGHG+      P+ +++L+    + +           D+G V+ +G    G LG    G
Sbjct: 4199 RLGHGNTDHVRRPKKVAALQGKKIISIATGSLHCVACSDSGEVFTWGDNDEGQLG---DG 4255

Query: 414  VSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT 446
                + RPR++ SL+  H+ ++  G  HT+ ++
Sbjct: 4256 TVTAIQRPRLVQSLQGKHIVKVICGSAHTLALS 4288



 Score =  108 bits (270), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 94/344 (27%), Positives = 157/344 (45%), Gaps = 31/344 (9%)

Query: 114  MQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHV------- 165
            + I+ G     ++S +  +++CG    G LG G            N P+   V       
Sbjct: 2943 IHISGGSKSLFIVSQDGKLYACGEGTNGRLGLGHNN---------NVPTPRQVPILNQYV 2993

Query: 166  ---VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNR-PIFRPRLVEALKGVPCKQV 221
               V V +   HA  +   G+VF+ G+      GH   NR  + +P+L+E+L+    + +
Sbjct: 2994 VKKVAVHSGGKHAMALTLDGKVFSWGEGEDGKLGH--GNRVTLEKPKLLESLRTKRIRDI 3051

Query: 222  TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGP--S 279
              G + +  +T  G ++T G   +G+LGHGD   +  PK +  L+    VVQ+A G   +
Sbjct: 3052 ACGSSHSAAITSSGELYTWGLGEYGRLGHGDNCTQLKPKLVTALQG-HRVVQVACGSRDA 3110

Query: 280  YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 339
              L +T  G+V+S+G G    LG G       P  ++  R  G+ VV++  G +  +AL 
Sbjct: 3111 QTLCLTEEGLVFSWGDGDFGKLGRGGSEGCSVPHQVE--RLNGVGVVQIECGAQFSLALT 3168

Query: 340  SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGF 399
              G V+TWGKG    LGHG +     P P+  L+    + V         + D+G V+ +
Sbjct: 3169 KIGEVWTWGKGDYYRLGHGTDQHVRKPTPIQGLRGKKVIHVAVGALHCLAVTDSGQVFAW 3228

Query: 400  GWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV 443
            G    G  G  +  V+ K   P ++  L    V++++ G  H+V
Sbjct: 3229 GDNDHGQQGSGNTVVNKK---PNLVLGLDGVFVNRVACGSSHSV 3269



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 70/248 (28%), Positives = 122/248 (49%), Gaps = 10/248 (4%)

Query: 233  IRGHVHTCGSNTHGQLG--HGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 290
            I   V   G N   QLG   G  +  PT  S+  L ++  +  I+ G   +  V+ +G +
Sbjct: 2905 ISSKVLVWGLNDKEQLGGLKGSKVKLPTYSSV--LSQLKPI-HISGGSKSLFIVSQDGKL 2961

Query: 291  YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKG 350
            Y+ G G+N  LG G  ++   PR +    +  +  V V +G +H +AL   G V++WG+G
Sbjct: 2962 YACGEGTNGRLGLGHNNNVPTPRQVPILNQYVVKKVAVHSGGKHAMALTLDGKVFSWGEG 3021

Query: 351  YCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFP 410
              G LGHG+ +    P+ L SL++     +      +  +  +G +Y +G   +G LG  
Sbjct: 3022 EDGKLGHGNRVTLEKPKLLESLRTKRIRDIACGSSHSAAITSSGELYTWGLGEYGRLGHG 3081

Query: 411  DRGVSDKVLRPRILDSLRAHHVSQISTGL--YHTVVVTDRGRLFGFGDNERAQLGHDTLR 468
            D       L+P+++ +L+ H V Q++ G     T+ +T+ G +F +GD +  +LG     
Sbjct: 3082 DNCTQ---LKPKLVTALQGHRVVQVACGSRDAQTLCLTEEGLVFSWGDGDFGKLGRGGSE 3138

Query: 469  GCLEPTEI 476
            GC  P ++
Sbjct: 3139 GCSVPHQV 3146



 Score = 89.0 bits (219), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 73/233 (31%), Positives = 113/233 (48%), Gaps = 11/233 (4%)

Query: 119 GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
           GR+   L S   V+S G+   G LGHG   ++ V  T+I       V  + A  +++A V
Sbjct: 588 GRHAMALSSAGEVYSWGAGEGGRLGHGDTASKEVP-TKIAL--EKQVTAIYAGASYSAAV 644

Query: 179 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT--AGLNFTGFLTIRGH 236
              G++FT G  +    GH +++   F P  V+ALK      V   +G   +  +T  G 
Sbjct: 645 SSVGELFTWGRGTYGRLGHGNSDDK-FVPTQVQALKAYKVVDVALGSGDAHSMAVTDGGL 703

Query: 237 VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 296
           +   G    G+LG+G     P P  I   E V SV +I +G  + +A++ +G +YS+G G
Sbjct: 704 LFAWGDGDFGKLGNGSCNGSPLPVQI---EGVSSVARIYSGSQFSVALSYDGTLYSWGKG 760

Query: 297 SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 349
               LGHG       P+ +     +G  +V V+ G  H +AL SSG +Y WG+
Sbjct: 761 HGGRLGHGNSEHSNVPKLVHAL--EGKKIVDVAVGSAHCLALTSSGELYGWGR 811



 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 62/210 (29%), Positives = 106/210 (50%), Gaps = 20/210 (9%)

Query: 271 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 330
           V Q+A   + +  VT +G +YS          H    + + P+ ++    +G+ V++++A
Sbjct: 536 VRQVACTENSIYIVTTSGQLYSI---------HSSCAETVAPKLVEGL--EGVSVIQIAA 584

Query: 331 GDE--HVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTF 388
             E  H +AL S+G VY+WG G  G LGHGD   K +P  ++  K   A+   A    + 
Sbjct: 585 HCEGRHAMALSSAGEVYSWGAGEGGRLGHGDTASKEVPTKIALEKQVTAIYAGASY--SA 642

Query: 389 VLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVT 446
            +   G ++ +G   +G LG    G SD    P  + +L+A+ V  ++  +G  H++ VT
Sbjct: 643 AVSSVGELFTWGRGTYGRLG---HGNSDDKFVPTQVQALKAYKVVDVALGSGDAHSMAVT 699

Query: 447 DRGRLFGFGDNERAQLGHDTLRGCLEPTEI 476
           D G LF +GD +  +LG+ +  G   P +I
Sbjct: 700 DGGLLFAWGDGDFGKLGNGSCNGSPLPVQI 729



 Score = 77.8 bits (190), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 77/280 (27%), Positives = 122/280 (43%), Gaps = 47/280 (16%)

Query: 96   FLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFT 155
             ++S++H   I++  A N   + G++   L S+  VFS G    G LGHG       S+ 
Sbjct: 4022 LVESLQHV--IIKKVAVN---SGGKHCLALSSDGEVFSWGEGEDGKLGHGNRD----SYD 4072

Query: 156  R---INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDT------NRPIFR 206
            R   I   S   VV ++    H+A +   G V T G       GH D+       R + R
Sbjct: 4073 RPKLIEALSGIGVVDIACGSAHSACITSQGHVLTWGKGRYGRLGHGDSEDQLQPKRCVLR 4132

Query: 207  --------------------------PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTC 240
                                      P  +E+L G+   +V  G  F+  LT  G V+T 
Sbjct: 4133 TTIMCGVGVTAIMASLAEEVPMGARSPMKIESLAGLGVIKVECGSQFSVALTRSGSVYTW 4192

Query: 241  GSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 300
            G   + +LGHG+T     PK +A L+    ++ IA G  + +A + +G V+++G      
Sbjct: 4193 GKGDYHRLGHGNTDHVRRPKKVAALQG-KKIISIATGSLHCVACSDSGEVFTWGDNDEGQ 4251

Query: 301  LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 340
            LG G      +PR +Q+   +G H+V+V  G  H +AL +
Sbjct: 4252 LGDGTVTAIQRPRLVQSL--QGKHIVKVICGSAHTLALST 4289


>gi|426364914|ref|XP_004049536.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 3
           [Gorilla gorilla gorilla]
          Length = 979

 Score =  129 bits (323), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 91/276 (32%), Positives = 142/276 (51%), Gaps = 10/276 (3%)

Query: 204 IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 263
           +  PR  +       + V  GL  T F+   G V+TCG N  GQLGH  +  R  P+ + 
Sbjct: 22  VLEPRKSDFFINKRIRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKS--RKKPEQVV 79

Query: 264 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH-GEQHDELQPRAIQTFRRKG 322
            L+   ++V ++ G ++ LA+   G VY++G  S+  LG  G +     PR I++     
Sbjct: 80  ALD-AQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSL--SD 136

Query: 323 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK-TLPEPLSSLKSHLAVQVC 381
           I +V+V+ G  H +AL  +  V+ WG+   G LG G +  K T P+ L SL     +QV 
Sbjct: 137 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVA 196

Query: 382 ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYH 441
           A    +FVL  +G+++G+G   FG LG  D   +D+ + P +L SLR+  +  I  G  H
Sbjct: 197 AGGAHSFVLTLSGAIFGWGRNKFGQLGLNDE--NDRYV-PNLLKSLRSQKIVYICCGEDH 253

Query: 442 TVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF 477
           T  +T  G +F FG     QLGH++    + P ++F
Sbjct: 254 TAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVF 289



 Score =  122 bits (305), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 93/293 (31%), Positives = 139/293 (47%), Gaps = 12/293 (4%)

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
           H  FVL  G V+TCG N     GH  + +   +P  V AL       V+ G   T  L  
Sbjct: 45  HTVFVLDDGTVYTCGCNDLGQLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLALND 101

Query: 234 RGHVHTCGSNTHGQLGH-GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
           +G V+  G ++ GQLG  G       P++I  L ++  +VQ+A G  + LA++    V+ 
Sbjct: 102 KGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSLSDI-QIVQVACGYYHSLALSKASEVFC 160

Query: 293 FGSGSNFCLGHGEQ-HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 351
           +G      LG G     +  P+ +++    GI  ++V+AG  H   L  SG ++ WG+  
Sbjct: 161 WGQNKYGQLGLGTDCKKQTSPQLLKSLL--GIPFMQVAAGGAHSFVLTLSGAIFGWGRNK 218

Query: 352 CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 411
            G LG  DE D+ +P  L SL+S   V +C  +  T  L   G V+ FG  G+G LG   
Sbjct: 219 FGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG--- 275

Query: 412 RGVSDKVLRPRILDSLRAHHVSQISTGLYHT-VVVTDRGRLFGFGDNERAQLG 463
              +   + PR +  L    V++I+ G  HT   V   GR++ FG     QLG
Sbjct: 276 HNSTSHEINPRKVFELMGSIVTEIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  108 bits (269), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 78/291 (26%), Positives = 138/291 (47%), Gaps = 8/291 (2%)

Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 179
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V VS  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVSCGEAHTLALN 100

Query: 180 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 239
             GQV+  G +S    G   +   I  PR +++L  +   QV  G   +  L+    V  
Sbjct: 101 DKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFC 160

Query: 240 CGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
            G N +GQLG G D   + +P+ +  L  +   +Q+AAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKYGQLGLGTDCKKQTSPQLLKSLLGI-PFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 299 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 358
             LG  +++D   P  +++ R + I  V +  G++H  AL   G V+T+G G  G LGH 
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRSQKI--VYICCGEDHTAALTKEGGVFTFGAGGYGQLGHN 277

Query: 359 DEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLG 408
               +  P  +  L   +  ++ C R+  +  +  +G +Y FG  G G LG
Sbjct: 278 STSHEINPRKVFELMGSIVTEIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 84/274 (30%), Positives = 131/274 (47%), Gaps = 10/274 (3%)

Query: 98  QSVEHSSDIVETSAGNM-QITTGRYHTLLISNS-SVFSCGSSLCGVLGH-GPETTQCVSF 154
           +S +    +V   A N+  ++ G  HTL +++   V++ G    G LG  G E  +C+  
Sbjct: 70  KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGSE--ECIRV 127

Query: 155 TR-INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEAL 213
            R I   S   +VQV+    H+  + ++ +VF  G N     G     +    P+L+++L
Sbjct: 128 PRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSL 187

Query: 214 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
            G+P  QV AG   +  LT+ G +   G N  GQLG  D  DR  P  +  L     +V 
Sbjct: 188 LGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRS-QKIVY 246

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           I  G  +  A+T  G V++FG+G    LGH     E+ PR +  F   G  V  ++ G +
Sbjct: 247 ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTEIACGRQ 304

Query: 334 HVVA-LDSSGYVYTWGKGYCGALGHGDEIDKTLP 366
           H  A + SSG +Y++G G  G LG G   ++  P
Sbjct: 305 HTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338



 Score = 79.0 bits (193), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 65/206 (31%), Positives = 99/206 (48%), Gaps = 6/206 (2%)

Query: 114 MQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +Q+  G YH+L +S +S VF  G +  G LG G +  +  S   +        +QV+A  
Sbjct: 140 VQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGG 199

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            H+  +  SG +F  G N     G  D N   + P L+++L+      +  G + T  LT
Sbjct: 200 AHSFVLTLSGAIFGWGRNKFGQLGLNDENDR-YVPNLLKSLRSQKIVYICCGEDHTAALT 258

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVV 290
             G V T G+  +GQLGH  T     P+ +   E +GS+V +IA G  +  A V  +G +
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTEIACGRQHTSAFVPSSGRI 316

Query: 291 YSFGSGSNFCLGHGEQHDELQPRAIQ 316
           YSFG G N  LG G   +   P  ++
Sbjct: 317 YSFGLGGNGQLGTGSTSNRKSPFTVK 342


>gi|63025188|ref|NP_071362.1| probable E3 ubiquitin-protein ligase HERC4 isoform a [Homo sapiens]
 gi|74707832|sp|Q5GLZ8.1|HERC4_HUMAN RecName: Full=Probable E3 ubiquitin-protein ligase HERC4; AltName:
           Full=HECT domain and RCC1-like domain-containing protein
           4
 gi|37900475|gb|AAO65480.1| HECT and RCC1 containing protein 4 isoform 1 [Homo sapiens]
 gi|119574649|gb|EAW54264.1| hect domain and RLD 4, isoform CRA_d [Homo sapiens]
          Length = 1057

 Score =  129 bits (323), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 91/276 (32%), Positives = 142/276 (51%), Gaps = 10/276 (3%)

Query: 204 IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 263
           +  PR  +       + V  GL  T F+   G V+TCG N  GQLGH  +  R  P+ + 
Sbjct: 22  VLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKS--RKKPEQVV 79

Query: 264 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH-GEQHDELQPRAIQTFRRKG 322
            L+   ++V ++ G ++ LA+   G VY++G  S+  LG  G +     PR I++     
Sbjct: 80  ALD-AQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSL--SD 136

Query: 323 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK-TLPEPLSSLKSHLAVQVC 381
           I +V+V+ G  H +AL  +  V+ WG+   G LG G +  K T P+ L SL     +QV 
Sbjct: 137 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVA 196

Query: 382 ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYH 441
           A    +FVL  +G+++G+G   FG LG  D   +D+ + P +L SLR+  +  I  G  H
Sbjct: 197 AGGAHSFVLTLSGAIFGWGRNKFGQLGLNDE--NDRYV-PNLLKSLRSQKIVYICCGEDH 253

Query: 442 TVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF 477
           T  +T  G +F FG     QLGH++    + P ++F
Sbjct: 254 TAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVF 289



 Score =  122 bits (305), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 103/333 (30%), Positives = 153/333 (45%), Gaps = 13/333 (3%)

Query: 135 GSSLCGVLGHGPETTQCVSFTRI-NFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSF 193
           G++  G LG G    + V   R  +F     V  V     H  FVL  G V+TCG N   
Sbjct: 5   GNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGCNDLG 64

Query: 194 CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGH-GD 252
             GH  + +   +P  V AL       V+ G   T  L  +G V+  G ++ GQLG  G 
Sbjct: 65  QLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGS 121

Query: 253 TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ-HDELQ 311
                 P++I  L ++  +VQ+A G  + LA++    V+ +G      LG G     +  
Sbjct: 122 EECIRVPRNIKSLSDI-QIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTS 180

Query: 312 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSS 371
           P+ +++    GI  ++V+AG  H   L  SG ++ WG+   G LG  DE D+ +P  L S
Sbjct: 181 PQLLKSLL--GIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKS 238

Query: 372 LKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHH 431
           L+S   V +C  +  T  L   G V+ FG  G+G LG      +   + PR +  L    
Sbjct: 239 LRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG---HNSTSHEINPRKVFELMGSI 295

Query: 432 VSQISTGLYHT-VVVTDRGRLFGFGDNERAQLG 463
           V++I+ G  HT   V   GR++ FG     QLG
Sbjct: 296 VTEIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 78/291 (26%), Positives = 138/291 (47%), Gaps = 8/291 (2%)

Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 179
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V VS  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVSCGEAHTLALN 100

Query: 180 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 239
             GQV+  G +S    G   +   I  PR +++L  +   QV  G   +  L+    V  
Sbjct: 101 DKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFC 160

Query: 240 CGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
            G N +GQLG G D   + +P+ +  L  +   +Q+AAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKYGQLGLGTDCKKQTSPQLLKSLLGI-PFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 299 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 358
             LG  +++D   P  +++ R + I  V +  G++H  AL   G V+T+G G  G LGH 
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRSQKI--VYICCGEDHTAALTKEGGVFTFGAGGYGQLGHN 277

Query: 359 DEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLG 408
               +  P  +  L   +  ++ C R+  +  +  +G +Y FG  G G LG
Sbjct: 278 STSHEINPRKVFELMGSIVTEIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 84/274 (30%), Positives = 131/274 (47%), Gaps = 10/274 (3%)

Query: 98  QSVEHSSDIVETSAGNM-QITTGRYHTLLISNS-SVFSCGSSLCGVLGH-GPETTQCVSF 154
           +S +    +V   A N+  ++ G  HTL +++   V++ G    G LG  G E  +C+  
Sbjct: 70  KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGSE--ECIRV 127

Query: 155 TR-INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEAL 213
            R I   S   +VQV+    H+  + ++ +VF  G N     G     +    P+L+++L
Sbjct: 128 PRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSL 187

Query: 214 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
            G+P  QV AG   +  LT+ G +   G N  GQLG  D  DR  P  +  L     +V 
Sbjct: 188 LGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRS-QKIVY 246

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           I  G  +  A+T  G V++FG+G    LGH     E+ PR +  F   G  V  ++ G +
Sbjct: 247 ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTEIACGRQ 304

Query: 334 HVVA-LDSSGYVYTWGKGYCGALGHGDEIDKTLP 366
           H  A + SSG +Y++G G  G LG G   ++  P
Sbjct: 305 HTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338



 Score = 78.6 bits (192), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 65/206 (31%), Positives = 99/206 (48%), Gaps = 6/206 (2%)

Query: 114 MQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +Q+  G YH+L +S +S VF  G +  G LG G +  +  S   +        +QV+A  
Sbjct: 140 VQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGG 199

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            H+  +  SG +F  G N     G  D N   + P L+++L+      +  G + T  LT
Sbjct: 200 AHSFVLTLSGAIFGWGRNKFGQLGLNDENDR-YVPNLLKSLRSQKIVYICCGEDHTAALT 258

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVV 290
             G V T G+  +GQLGH  T     P+ +   E +GS+V +IA G  +  A V  +G +
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTEIACGRQHTSAFVPSSGRI 316

Query: 291 YSFGSGSNFCLGHGEQHDELQPRAIQ 316
           YSFG G N  LG G   +   P  ++
Sbjct: 317 YSFGLGGNGQLGTGSTSNRKSPFTVK 342


>gi|417407153|gb|JAA50201.1| Putative e3 ubiquitin-protein ligase herc1 [Desmodus rotundus]
          Length = 4846

 Score =  129 bits (323), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 103/339 (30%), Positives = 167/339 (49%), Gaps = 17/339 (5%)

Query: 115  QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQV---SA 170
            Q+  G+  T +I +N +V +CG    G LG G      V  T I+      V Q+     
Sbjct: 4016 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHV-LTVISALQGFVVTQLVTSCG 4074

Query: 171  SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
            S+ H+  + +SG+VF+ GD      GH +++R   RPR +EAL+G    Q++ G   +  
Sbjct: 4075 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQMSCGFKHSAV 4133

Query: 231  LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSVVQIAAGPSYMLAVTGNG 288
            +T  G + T G+  +G+LG G+T ++  P+ +  LE  ++G   Q+A G ++ LAV+ +G
Sbjct: 4134 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIG---QVACGLNHTLAVSADG 4190

Query: 289  -VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 347
             VV++FG G    LG G    +  P+ +      GI + +V+ G +  VAL   G+VYT+
Sbjct: 4191 SVVWAFGDGDYGKLGLGNSTAKSSPQKVDVL--CGIGIKKVACGTQFSVALTKDGHVYTF 4248

Query: 348  GKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSL 407
            G+     L  G   +   P+ +  L   +   V      T  L  TG VY +G    G L
Sbjct: 4249 GQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQL 4308

Query: 408  GFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT 446
            G    G ++ V  P ++  L+  ++ QIS G  H+   T
Sbjct: 4309 GL---GHTNHVREPTLVTVLQGKNIRQISAGRCHSAAWT 4344



 Score =  102 bits (254), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 106/379 (27%), Positives = 165/379 (43%), Gaps = 29/379 (7%)

Query: 96  FLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFT 155
           F +    +SD   T A    I TG    ++     V+  GS+    L  G   TQ     
Sbjct: 340 FEEVCRMASDYSRTCASPDSIQTGDA-PIVSETCEVYVWGSNSSHQLVEG---TQEKILQ 395

Query: 156 RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTN------RPIFRPRL 209
               PS +    + A +     +   G V  CG  S    G  D+N      +  F P  
Sbjct: 396 PKLAPSFSDAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPH- 454

Query: 210 VEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG 269
             ++K V   + + G   T   T  G V + G   +G+LGHG++  +  PK I    +  
Sbjct: 455 -RSIKKVSSSKGSDG--HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGK 511

Query: 270 SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS 329
            VV ++AG  +  AVT +G +Y++G G    LGHG+ +     R I T  +   +V  VS
Sbjct: 512 VVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNS----RNIPTLVKDISNVGEVS 567

Query: 330 AGDEHVVALDSSGY-VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTF 388
            G  H +AL   G  V+++G G  G LGHGD      P+ + +L+     +VCA  + + 
Sbjct: 568 CGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSL 627

Query: 389 VLVDTGSVYGFG---WMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVV 445
            L  TG VY +G    +G GS            LRP++++ L A  +  IS G  H + +
Sbjct: 628 SLTSTGQVYAWGCGACLGCGS-------SEATALRPKLIEELAATRIVDISIGDSHCLAL 680

Query: 446 TDRGRLFGFGDNERAQLGH 464
           +    ++ +G+N   Q G 
Sbjct: 681 SHDNEVYAWGNNSMGQCGQ 699



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 87/324 (26%), Positives = 150/324 (46%), Gaps = 13/324 (4%)

Query: 160  PSAAHVVQVSASENHAAFVLQS-GQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPC 218
            PS +   QV   +N   FV+Q+ G V  CG+ S    G  +++  +    ++ AL+G   
Sbjct: 4009 PSFSQAQQVICGQN-CTFVIQANGTVLACGEGSYGRLGQGNSDD-LHVLTVISALQGFVV 4066

Query: 219  KQVTAGLNFTGF---LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA 275
             Q+       G    LT  G V + G   +G+LGHG++  +  P+ I  L+    VVQ++
Sbjct: 4067 TQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQG-EEVVQMS 4125

Query: 276  AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHV 335
             G  +   VT +G +++FG+G    LG G   ++  P  +     +G  + +V+ G  H 
Sbjct: 4126 CGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTAL--EGYQIGQVACGLNHT 4183

Query: 336  VALDSSG-YVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 394
            +A+ + G  V+ +G G  G LG G+   K+ P+ +  L      +V    + +  L   G
Sbjct: 4184 LAVSADGSVVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDG 4243

Query: 395  SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 454
             VY FG      +G P+ G +    RP+ +  L    +  ++ G  HT+ +   G ++ +
Sbjct: 4244 HVYTFGQDRL--IGLPE-GRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAW 4300

Query: 455  GDNERAQLGHDTLRGCLEPTEIFI 478
            G N   QLG        EPT + +
Sbjct: 4301 GSNSEGQLGLGHTNHVREPTLVTV 4324



 Score = 91.3 bits (225), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 89/266 (33%), Positives = 128/266 (48%), Gaps = 14/266 (5%)

Query: 122 HTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
           HTL   +   VFS G    G LGHG  +TQ              VV VSA   H+A V +
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528

Query: 181 SGQVFTCGDNSSFCCGHRDTN-RPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH-VH 238
            G+++T G+      GH D+N R I  P LV+ +  V   +V+ G + T  L+  G  V 
Sbjct: 529 DGELYTWGEGDFGRLGHGDSNSRNI--PTLVKDISNV--GEVSCGSSHTIALSKDGRTVW 584

Query: 239 TCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
           + G   +G+LGHGDT     PK I  L+ +  + ++ AG    L++T  G VY++G G+ 
Sbjct: 585 SFGGGDNGKLGHGDTNRVYKPKVIEALQGM-FIRKVCAGSQSSLSLTSTGQVYAWGCGA- 642

Query: 299 FCLGHG-EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 357
            CLG G  +   L+P+ I+        +V +S GD H +AL     VY WG    G  G 
Sbjct: 643 -CLGCGSSEATALRPKLIEEL--AATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQ 699

Query: 358 GDEIDK-TLPEPLSSLKSHLAVQVCA 382
           G+     T P+ +S L      Q+ A
Sbjct: 700 GNSTGPITKPKKVSGLDGIAIQQISA 725



 Score = 84.0 bits (206), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 68/230 (29%), Positives = 108/230 (46%), Gaps = 11/230 (4%)

Query: 237  VHTCGSNTHGQLGH-GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 295
            V+  G+  HGQL   G  +  P   + AP        Q+  G +    +  NG V + G 
Sbjct: 3984 VYLWGAGRHGQLAEAGRNVMVP---AAAP--SFSQAQQVICGQNCTFVIQANGTVLACGE 4038

Query: 296  GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG-DEHVVALDSSGYVYTWGKGYCGA 354
            GS   LG G   D      I   +   +  +  S G D H +AL  SG V++WG G  G 
Sbjct: 4039 GSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGK 4098

Query: 355  LGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGV 414
            LGHG+   +  P  + +L+    VQ+    + + V+   G ++ FG   +G LG  +   
Sbjct: 4099 LGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN--T 4156

Query: 415  SDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGR-LFGFGDNERAQLG 463
            S+K L P  + +L  + + Q++ GL HT+ V+  G  ++ FGD +  +LG
Sbjct: 4157 SNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSVVWAFGDGDYGKLG 4205



 Score = 49.3 bits (116), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 41/143 (28%), Positives = 67/143 (46%), Gaps = 9/143 (6%)

Query: 344  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 403
            VY WG G  G L    E  + +  P ++     A QV   +  TFV+   G+V   G   
Sbjct: 3984 VYLWGAGRHGQLA---EAGRNVMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGS 4040

Query: 404  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLY---HTVVVTDRGRLFGFGDNERA 460
            +G LG   +G SD +    ++ +L+   V+Q+ T      H++ +T+ G +F +GD +  
Sbjct: 4041 YGRLG---QGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYG 4097

Query: 461  QLGHDTLRGCLEPTEIFIQEMEE 483
            +LGH        P +I   + EE
Sbjct: 4098 KLGHGNSDRQRRPRQIEALQGEE 4120



 Score = 46.6 bits (109), Expect = 0.027,   Method: Compositional matrix adjust.
 Identities = 26/94 (27%), Positives = 46/94 (48%), Gaps = 2/94 (2%)

Query: 131 VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDN 190
           V++ G   C  LG G      +    I   +A  +V +S  ++H   +    +V+  G+N
Sbjct: 635 VYAWGCGAC--LGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNN 692

Query: 191 SSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           S   CG  ++  PI +P+ V  L G+  +Q++AG
Sbjct: 693 SMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAG 726


>gi|443690304|gb|ELT92472.1| hypothetical protein CAPTEDRAFT_172844 [Capitella teleta]
          Length = 4817

 Score =  129 bits (323), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 92/312 (29%), Positives = 151/312 (48%), Gaps = 14/312 (4%)

Query: 161  SAAHVVQVSASENHAAFVLQSGQVFTCGD--NSSFCCGHRDTNRPIFRPRLVEALKGVPC 218
            S    VQ+         V Q G++F CG+  N     G    N P  +PR + +L     
Sbjct: 2945 STLKCVQIVGGSKSLFCVTQDGKLFACGEATNGRLGLGISAGNVP--QPRQLTSLSQYVI 3002

Query: 219  KQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA 276
            K+V   +G      LT+ G V + G    G+LGH   ++   P+ I  L     V  IA 
Sbjct: 3003 KKVAVHSGGRHAMALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALRS-KRVRDIAC 3061

Query: 277  GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEH 334
            G S+  A+  NG +Y++G G    LGHG+   +L+P+ ++    +G  V++V+ G  D  
Sbjct: 3062 GGSHSAAIISNGDLYTWGLGEYGRLGHGDNTTQLRPKLVKAL--EGQRVIQVALGSRDAQ 3119

Query: 335  VVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 394
             +AL  SG VY+WG G  G LG G     ++P P+  L      Q+    + +  L  +G
Sbjct: 3120 TLALTDSGTVYSWGDGDFGKLGRGGSEGCSVPHPIERLNGVGVCQIECGAQFSLALTKSG 3179

Query: 395  SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 454
             V+ +G   +  LG    G    V +P+++++L+   V+ ++ G  H + V D G+++ +
Sbjct: 3180 QVWTWGKGDYFRLG---HGTDAHVRKPQLVETLKGKKVTHVAVGALHCLSVLDNGQVYAW 3236

Query: 455  GDNERAQLGHDT 466
            GDN+  Q G+ T
Sbjct: 3237 GDNDHGQQGNST 3248



 Score =  129 bits (323), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 92/288 (31%), Positives = 147/288 (51%), Gaps = 10/288 (3%)

Query: 183  QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 242
            QVF  G N     G    ++ I  P + E L  + C Q+  G      +T  G +  CG 
Sbjct: 2915 QVFVWGLNDKDQLGGPKGSK-IKTPGINETLSTLKCVQIVGGSKSLFCVTQDGKLFACGE 2973

Query: 243  NTHGQLGHGDTL-DRPTPKSIAPLEE-VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 300
             T+G+LG G +  + P P+ +  L + V   V + +G  + +A+T +G V+S+G G +  
Sbjct: 2974 ATNGRLGLGISAGNVPQPRQLTSLSQYVIKKVAVHSGGRHAMALTVDGKVFSWGEGDDGK 3033

Query: 301  LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 360
            LGH  + +  +PR I+  R K   V  ++ G  H  A+ S+G +YTWG G  G LGHGD 
Sbjct: 3034 LGHFSRMNCDKPRLIEALRSK--RVRDIACGGSHSAAIISNGDLYTWGLGEYGRLGHGDN 3091

Query: 361  IDKTLPEPLSSLKSHLAVQVC--ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKV 418
              +  P+ + +L+    +QV   +R  +T  L D+G+VY +G   FG LG   RG S+  
Sbjct: 3092 TTQLRPKLVKALEGQRVIQVALGSRDAQTLALTDSGTVYSWGDGDFGKLG---RGGSEGC 3148

Query: 419  LRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDT 466
              P  ++ L    V QI  G   ++ +T  G+++ +G  +  +LGH T
Sbjct: 3149 SVPHPIERLNGVGVCQIECGAQFSLALTKSGQVWTWGKGDYFRLGHGT 3196



 Score =  122 bits (305), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 78/269 (28%), Positives = 130/269 (48%), Gaps = 6/269 (2%)

Query: 207  PRLVEALKGVPCKQV--TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP 264
            P L+E+++ V  ++V   +G      L+  G V++ G    G+LGHG+      P++I  
Sbjct: 4012 PTLIESIQHVFIRKVAINSGGKHCLALSAEGEVYSWGEGEDGKLGHGNRSPCDRPRAIES 4071

Query: 265  LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH 324
            L     VV IAAG ++   +T  G +YS+G G    LGHG+  D+ +P+ +   +   + 
Sbjct: 4072 LRG-KEVVDIAAGGAHSACITSTGELYSWGKGRYGRLGHGDSEDQTKPKLVDALKGYRVT 4130

Query: 325  VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARK 384
             V   +GD   + +     V++WG G  G LG G      +P  + +L+    ++V    
Sbjct: 4131 DVACGSGDAQTLCITDDDSVWSWGDGDYGKLGRGGSDGCKVPMKIDALQGLGVIKVECGS 4190

Query: 385  RKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV 444
            + +  L  +G+VY +G   +  LG    G  D + RPR   +L+   +  I+ G  H V 
Sbjct: 4191 QFSVALTKSGAVYTWGKGDYHRLG---HGTEDHIRRPRRCTTLQGKKIVSIACGSLHCVA 4247

Query: 445  VTDRGRLFGFGDNERAQLGHDTLRGCLEP 473
             TD G ++ +GDN+  QLG  T      P
Sbjct: 4248 CTDAGEVYTWGDNDEGQLGDGTTNAIQRP 4276



 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 91/314 (28%), Positives = 150/314 (47%), Gaps = 20/314 (6%)

Query: 155 TRINFPSAAH-VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHR-DTNRPIFRPRLVEA 212
           T I  P+    ++QV+ S N    +L++G+V+   +++     H   T   I   +L   
Sbjct: 425 TTIPLPNDLDDIIQVACSSNSLLILLRTGRVYKMTNSAEPQSMHEISTLADIEIIKLAAH 484

Query: 213 LKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV 272
            +G  C  +T+           G V++ G+   G+LGHGDT+   +P  I  L    SVV
Sbjct: 485 SEGSHCLALTS----------EGDVYSWGNGDFGKLGHGDTVTCDSPMLINELHG-KSVV 533

Query: 273 QIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS--A 330
            +A G  +  A+T +G ++++G GS   LG G   D L P  +      G+ VV V+  +
Sbjct: 534 NVACGSHHSAAITASGELFTWGRGSFGRLGLGSTEDILTPALVSGLL--GVTVVDVACGS 591

Query: 331 GDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVL 390
           GD   +AL  +G VY+WG G  G LG G       P+ +  L+     +V    + +  +
Sbjct: 592 GDAQTIALADTGSVYSWGDGEYGKLGRGGSEGCKAPKLVDKLQGLDVTRVYCGPQYSAAV 651

Query: 391 VDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGR 450
              G+V+ +G      LG    G  + V  PR +++L   HV+ +S G +H +  T+ G 
Sbjct: 652 CKNGAVFTWGNGEGYKLG---HGTEEHVRFPRQVETLAGKHVTSLSLGSHHCLATTEEGE 708

Query: 451 LFGFGDNERAQLGH 464
           L  +G N++ QLG 
Sbjct: 709 LLSWGRNDKGQLGE 722



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 94/305 (30%), Positives = 139/305 (45%), Gaps = 13/305 (4%)

Query: 92  RVLRFLQSVEHSSDIVETSAGNMQI------TTGRYHTLLISNSSVFSCGSSLCGVLGHG 145
           RV +   S E  S    ++  +++I      + G +   L S   V+S G+   G LGHG
Sbjct: 454 RVYKMTNSAEPQSMHEISTLADIEIIKLAAHSEGSHCLALTSEGDVYSWGNGDFGKLGHG 513

Query: 146 PETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIF 205
            +T  C S   IN      VV V+   +H+A +  SG++FT G  S    G   T   I 
Sbjct: 514 -DTVTCDSPMLINELHGKSVVNVACGSHHSAAITASGELFTWGRGSFGRLGLGSTED-IL 571

Query: 206 RPRLVEALKGVPCKQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 263
            P LV  L GV    V   +G   T  L   G V++ G   +G+LG G +     PK + 
Sbjct: 572 TPALVSGLLGVTVVDVACGSGDAQTIALADTGSVYSWGDGEYGKLGRGGSEGCKAPKLVD 631

Query: 264 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGI 323
            L+ +  V ++  GP Y  AV  NG V+++G+G  + LGHG +     PR ++T    G 
Sbjct: 632 KLQGL-DVTRVYCGPQYSAAVCKNGAVFTWGNGEGYKLGHGTEEHVRFPRQVETL--AGK 688

Query: 324 HVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCAR 383
           HV  +S G  H +A    G + +WG+   G LG G    K  P   +SL     + +   
Sbjct: 689 HVTSLSLGSHHCLATTEEGELLSWGRNDKGQLGEGHTGLKAEPAFAASLLGKCIIGITCS 748

Query: 384 KRKTF 388
             +TF
Sbjct: 749 SAQTF 753



 Score =  102 bits (254), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 78/249 (31%), Positives = 118/249 (47%), Gaps = 8/249 (3%)

Query: 113  NMQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSAS 171
             + I +G  H L +S    V+S G    G LGHG   + C     I       VV ++A 
Sbjct: 4025 KVAINSGGKHCLALSAEGEVYSWGEGEDGKLGHG-NRSPCDRPRAIESLRGKEVVDIAAG 4083

Query: 172  ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
              H+A +  +G++++ G       GH D+     +P+LV+ALKG     V  G      L
Sbjct: 4084 GAHSACITSTGELYSWGKGRYGRLGHGDSEDQT-KPKLVDALKGYRVTDVACGSGDAQTL 4142

Query: 232  TIRGH--VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 289
             I     V + G   +G+LG G +     P  I  L+ +G V+++  G  + +A+T +G 
Sbjct: 4143 CITDDDSVWSWGDGDYGKLGRGGSDGCKVPMKIDALQGLG-VIKVECGSQFSVALTKSGA 4201

Query: 290  VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 349
            VY++G G    LGHG +    +PR   T   +G  +V ++ G  H VA   +G VYTWG 
Sbjct: 4202 VYTWGKGDYHRLGHGTEDHIRRPRRCTTL--QGKKIVSIACGSLHCVACTDAGEVYTWGD 4259

Query: 350  GYCGALGHG 358
               G LG G
Sbjct: 4260 NDEGQLGDG 4268



 Score = 99.8 bits (247), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 71/244 (29%), Positives = 121/244 (49%), Gaps = 6/244 (2%)

Query: 235  GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 294
            G +   G N  GQLG  +      P S   L  +  V Q+  G   + ++TG+G V + G
Sbjct: 3936 GQIWGWGHNHRGQLGGVEGAKVKLPVSCETLATMRPV-QLIGGEQTLFSITGDGKVCATG 3994

Query: 295  SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGA 354
             G+   LG G       P  I++ +   I  V +++G +H +AL + G VY+WG+G  G 
Sbjct: 3995 YGAGGRLGIGGTDSVATPTLIESIQHVFIRKVAINSGGKHCLALSAEGEVYSWGEGEDGK 4054

Query: 355  LGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGV 414
            LGHG+      P  + SL+    V + A    +  +  TG +Y +G   +G LG  D   
Sbjct: 4055 LGHGNRSPCDRPRAIESLRGKEVVDIAAGGAHSACITSTGELYSWGKGRYGRLGHGD--- 4111

Query: 415  SDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLE 472
            S+   +P+++D+L+ + V+ ++  +G   T+ +TD   ++ +GD +  +LG     GC  
Sbjct: 4112 SEDQTKPKLVDALKGYRVTDVACGSGDAQTLCITDDDSVWSWGDGDYGKLGRGGSDGCKV 4171

Query: 473  PTEI 476
            P +I
Sbjct: 4172 PMKI 4175



 Score = 98.6 bits (244), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 79/241 (32%), Positives = 114/241 (47%), Gaps = 7/241 (2%)

Query: 119  GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
            GR+   L  +  VFS G    G LGH      C     I    +  V  ++   +H+A +
Sbjct: 3011 GRHAMALTVDGKVFSWGEGDDGKLGHFSRMN-CDKPRLIEALRSKRVRDIACGGSHSAAI 3069

Query: 179  LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN--FTGFLTIRGH 236
            + +G ++T G       GH D N    RP+LV+AL+G    QV  G     T  LT  G 
Sbjct: 3070 ISNGDLYTWGLGEYGRLGHGD-NTTQLRPKLVKALEGQRVIQVALGSRDAQTLALTDSGT 3128

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 296
            V++ G    G+LG G +     P  I  L  VG V QI  G  + LA+T +G V+++G G
Sbjct: 3129 VYSWGDGDFGKLGRGGSEGCSVPHPIERLNGVG-VCQIECGAQFSLALTKSGQVWTWGKG 3187

Query: 297  SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 356
              F LGHG      +P+ ++T   KG  V  V+ G  H +++  +G VY WG    G  G
Sbjct: 3188 DYFRLGHGTDAHVRKPQLVETL--KGKKVTHVAVGALHCLSVLDNGQVYAWGDNDHGQQG 3245

Query: 357  H 357
            +
Sbjct: 3246 N 3246



 Score = 98.2 bits (243), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 70/200 (35%), Positives = 104/200 (52%), Gaps = 9/200 (4%)

Query: 271 VVQIAAGP--SYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRV 328
           ++++AA    S+ LA+T  G VYS+G+G    LGHG+      P  I      G  VV V
Sbjct: 478 IIKLAAHSEGSHCLALTSEGDVYSWGNGDFGKLGHGDTVTCDSPMLINELH--GKSVVNV 535

Query: 329 SAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVC--ARKRK 386
           + G  H  A+ +SG ++TWG+G  G LG G   D   P  +S L     V V   +   +
Sbjct: 536 ACGSHHSAAITASGELFTWGRGSFGRLGLGSTEDILTPALVSGLLGVTVVDVACGSGDAQ 595

Query: 387 TFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT 446
           T  L DTGSVY +G   +G LG   RG S+    P+++D L+   V+++  G  ++  V 
Sbjct: 596 TIALADTGSVYSWGDGEYGKLG---RGGSEGCKAPKLVDKLQGLDVTRVYCGPQYSAAVC 652

Query: 447 DRGRLFGFGDNERAQLGHDT 466
             G +F +G+ E  +LGH T
Sbjct: 653 KNGAVFTWGNGEGYKLGHGT 672



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 75/264 (28%), Positives = 119/264 (45%), Gaps = 10/264 (3%)

Query: 216  VPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA 275
            V  K+V  G   +G   I+  V   G N   QLG        TP     L  +   VQI 
Sbjct: 2898 VMAKKVKCG---SGVKDIQTQVFVWGLNDKDQLGGPKGSKIKTPGINETLSTL-KCVQIV 2953

Query: 276  AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDEL-QPRAIQTFRRKGIHVVRVSAGDEH 334
             G   +  VT +G +++ G  +N  LG G     + QPR + +  +  I  V V +G  H
Sbjct: 2954 GGSKSLFCVTQDGKLFACGEATNGRLGLGISAGNVPQPRQLTSLSQYVIKKVAVHSGGRH 3013

Query: 335  VVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 394
             +AL   G V++WG+G  G LGH   ++   P  + +L+S     +      +  ++  G
Sbjct: 3014 AMALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALRSKRVRDIACGGSHSAAIISNG 3073

Query: 395  SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLY--HTVVVTDRGRLF 452
             +Y +G   +G LG  D       LRP+++ +L    V Q++ G     T+ +TD G ++
Sbjct: 3074 DLYTWGLGEYGRLGHGDNTTQ---LRPKLVKALEGQRVIQVALGSRDAQTLALTDSGTVY 3130

Query: 453  GFGDNERAQLGHDTLRGCLEPTEI 476
             +GD +  +LG     GC  P  I
Sbjct: 3131 SWGDGDFGKLGRGGSEGCSVPHPI 3154



 Score = 82.0 bits (201), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 61/242 (25%), Positives = 107/242 (44%), Gaps = 24/242 (9%)

Query: 240 CGSN---THGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 296
           CG+      G L   D     TP +I    ++  ++Q+A   + +L +   G VY   + 
Sbjct: 402 CGAQELFAWGWLSTSDATCHNTPTTIPLPNDLDDIIQVACSSNSLLILLRTGRVYKMTNS 461

Query: 297 SNFCLGHGEQHDELQPRAIQTFRR-KGIHVVRVSAGDE--HVVALDSSGYVYTWGKGYCG 353
           +             +P+++        I +++++A  E  H +AL S G VY+WG G  G
Sbjct: 462 A-------------EPQSMHEISTLADIEIIKLAAHSEGSHCLALTSEGDVYSWGNGDFG 508

Query: 354 ALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRG 413
            LGHGD +    P  ++ L     V V      +  +  +G ++ +G   FG LG    G
Sbjct: 509 KLGHGDTVTCDSPMLINELHGKSVVNVACGSHHSAAITASGELFTWGRGSFGRLGL---G 565

Query: 414 VSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCL 471
            ++ +L P ++  L    V  ++  +G   T+ + D G ++ +GD E  +LG     GC 
Sbjct: 566 STEDILTPALVSGLLGVTVVDVACGSGDAQTIALADTGSVYSWGDGEYGKLGRGGSEGCK 625

Query: 472 EP 473
            P
Sbjct: 626 AP 627



 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 66/228 (28%), Positives = 102/228 (44%), Gaps = 10/228 (4%)

Query: 119  GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS--ASENHAA 176
            G +   +ISN  +++ G    G LGHG  TTQ +    +       V+QV+  + +    
Sbjct: 3063 GSHSAAIISNGDLYTWGLGEYGRLGHGDNTTQ-LRPKLVKALEGQRVIQVALGSRDAQTL 3121

Query: 177  FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
             +  SG V++ GD      G R  +     P  +E L GV   Q+  G  F+  LT  G 
Sbjct: 3122 ALTDSGTVYSWGDGDFGKLG-RGGSEGCSVPHPIERLNGVGVCQIECGAQFSLALTKSGQ 3180

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 296
            V T G   + +LGHG       P+ +  L+    V  +A G  + L+V  NG VY++G  
Sbjct: 3181 VWTWGKGDYFRLGHGTDAHVRKPQLVETLKG-KKVTHVAVGALHCLSVLDNGQVYAWGDN 3239

Query: 297  SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA---LDSS 341
             +   G+       +P  +Q    +G  + RV+ G  H +A   LDSS
Sbjct: 3240 DHGQQGNSTTTVNRKPALVQGL--EGCKISRVACGSSHSIAWCTLDSS 3285



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 56/205 (27%), Positives = 88/205 (42%), Gaps = 8/205 (3%)

Query: 118  TGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
            +G   TL I++  SV+S G    G LG G  +  C    +I+      V++V      + 
Sbjct: 4136 SGDAQTLCITDDDSVWSWGDGDYGKLGRG-GSDGCKVPMKIDALQGLGVIKVECGSQFSV 4194

Query: 177  FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
             + +SG V+T G       GH  T   I RPR    L+G     +  G       T  G 
Sbjct: 4195 ALTKSGAVYTWGKGDYHRLGH-GTEDHIRRPRRCTTLQGKKIVSIACGSLHCVACTDAGE 4253

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 296
            V+T G N  GQLG G T     P+ +A L+    + ++A G ++ LA + N  V +    
Sbjct: 4254 VYTWGDNDEGQLGDGTTNAIQRPRLVAALQG-KKINRVACGSAHSLAWSTNKPVNAGKLP 4312

Query: 297  SNFCLGHGEQHDELQPRAIQTFRRK 321
            +   +    +++ LQ   I   R +
Sbjct: 4313 AQIPM----EYNSLQSLPINVLRNR 4333


>gi|397520495|ref|XP_003830352.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 3
           [Pan paniscus]
          Length = 979

 Score =  129 bits (323), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 91/276 (32%), Positives = 142/276 (51%), Gaps = 10/276 (3%)

Query: 204 IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 263
           +  PR  +       + V  GL  T F+   G V+TCG N  GQLGH  +  R  P+ + 
Sbjct: 22  VLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKS--RKKPEQVV 79

Query: 264 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH-GEQHDELQPRAIQTFRRKG 322
            L+   ++V ++ G ++ LA+   G VY++G  S+  LG  G +     PR I++     
Sbjct: 80  ALD-AQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSL--SD 136

Query: 323 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK-TLPEPLSSLKSHLAVQVC 381
           I +V+V+ G  H +AL  +  V+ WG+   G LG G +  K T P+ L SL     +QV 
Sbjct: 137 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVA 196

Query: 382 ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYH 441
           A    +FVL  +G+++G+G   FG LG  D   +D+ + P +L SLR+  +  I  G  H
Sbjct: 197 AGGAHSFVLTLSGAIFGWGRNKFGQLGLNDE--NDRYV-PNLLKSLRSQKIVYICCGEDH 253

Query: 442 TVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF 477
           T  +T  G +F FG     QLGH++    + P ++F
Sbjct: 254 TAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVF 289



 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 104/333 (31%), Positives = 153/333 (45%), Gaps = 13/333 (3%)

Query: 135 GSSLCGVLGHGPETTQCVSFTRI-NFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSF 193
           G++  G LG G    + V   R  +F     V  V     H  FVL  G V+TCG N   
Sbjct: 5   GNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGCNDLG 64

Query: 194 CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGH-GD 252
             GH  + +   +P  V AL       V+ G   T  L  +G V+  G ++ GQLG  G 
Sbjct: 65  QLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGS 121

Query: 253 TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ-HDELQ 311
                 P++I  L ++  +VQ+A G  + LA++    V+ +G      LG G     +  
Sbjct: 122 EECIRVPRNIKSLSDI-QIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTS 180

Query: 312 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSS 371
           P+ +++    GI  ++V+AG  H   L  SG ++ WG+   G LG  DE D+ +P  L S
Sbjct: 181 PQLLKSLL--GIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKS 238

Query: 372 LKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHH 431
           L+S   V +C  +  T  L   G V+ FG  G+G LG      +   + PR +  L    
Sbjct: 239 LRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG---HNSTSHEINPRKVFELMGSI 295

Query: 432 VSQISTGLYHT-VVVTDRGRLFGFGDNERAQLG 463
           V+QI+ G  HT   V   GR++ FG     QLG
Sbjct: 296 VTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  109 bits (272), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 79/291 (27%), Positives = 138/291 (47%), Gaps = 8/291 (2%)

Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 179
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V VS  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVSCGEAHTLALN 100

Query: 180 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 239
             GQV+  G +S    G   +   I  PR +++L  +   QV  G   +  L+    V  
Sbjct: 101 DKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFC 160

Query: 240 CGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
            G N +GQLG G D   + +P+ +  L  +   +Q+AAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKYGQLGLGTDCKKQTSPQLLKSLLGI-PFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 299 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 358
             LG  +++D   P  +++ R + I  V +  G++H  AL   G V+T+G G  G LGH 
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRSQKI--VYICCGEDHTAALTKEGGVFTFGAGGYGQLGHN 277

Query: 359 DEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLG 408
               +  P  +  L   +  Q+ C R+  +  +  +G +Y FG  G G LG
Sbjct: 278 STSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  101 bits (251), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 84/274 (30%), Positives = 132/274 (48%), Gaps = 10/274 (3%)

Query: 98  QSVEHSSDIVETSAGNM-QITTGRYHTLLISNS-SVFSCGSSLCGVLGH-GPETTQCVSF 154
           +S +    +V   A N+  ++ G  HTL +++   V++ G    G LG  G E  +C+  
Sbjct: 70  KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGSE--ECIRV 127

Query: 155 TR-INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEAL 213
            R I   S   +VQV+    H+  + ++ +VF  G N     G     +    P+L+++L
Sbjct: 128 PRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSL 187

Query: 214 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
            G+P  QV AG   +  LT+ G +   G N  GQLG  D  DR  P  +  L     +V 
Sbjct: 188 LGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRS-QKIVY 246

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           I  G  +  A+T  G V++FG+G    LGH     E+ PR +  F   G  V +++ G +
Sbjct: 247 ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQ 304

Query: 334 HVVA-LDSSGYVYTWGKGYCGALGHGDEIDKTLP 366
           H  A + SSG +Y++G G  G LG G   ++  P
Sbjct: 305 HTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 66/206 (32%), Positives = 99/206 (48%), Gaps = 6/206 (2%)

Query: 114 MQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +Q+  G YH+L +S +S VF  G +  G LG G +  +  S   +        +QV+A  
Sbjct: 140 VQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGG 199

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            H+  +  SG +F  G N     G  D N   + P L+++L+      +  G + T  LT
Sbjct: 200 AHSFVLTLSGAIFGWGRNKFGQLGLNDENDR-YVPNLLKSLRSQKIVYICCGEDHTAALT 258

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVV 290
             G V T G+  +GQLGH  T     P+ +   E +GS+V QIA G  +  A V  +G +
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRI 316

Query: 291 YSFGSGSNFCLGHGEQHDELQPRAIQ 316
           YSFG G N  LG G   +   P  ++
Sbjct: 317 YSFGLGGNGQLGTGSTSNRKSPFTVK 342


>gi|417407155|gb|JAA50202.1| Putative e3 ubiquitin-protein ligase herc1 [Desmodus rotundus]
          Length = 4853

 Score =  129 bits (323), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 103/339 (30%), Positives = 167/339 (49%), Gaps = 17/339 (5%)

Query: 115  QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQV---SA 170
            Q+  G+  T +I +N +V +CG    G LG G      V  T I+      V Q+     
Sbjct: 4023 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHV-LTVISALQGFVVTQLVTSCG 4081

Query: 171  SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
            S+ H+  + +SG+VF+ GD      GH +++R   RPR +EAL+G    Q++ G   +  
Sbjct: 4082 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQMSCGFKHSAV 4140

Query: 231  LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSVVQIAAGPSYMLAVTGNG 288
            +T  G + T G+  +G+LG G+T ++  P+ +  LE  ++G   Q+A G ++ LAV+ +G
Sbjct: 4141 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIG---QVACGLNHTLAVSADG 4197

Query: 289  -VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 347
             VV++FG G    LG G    +  P+ +      GI + +V+ G +  VAL   G+VYT+
Sbjct: 4198 SVVWAFGDGDYGKLGLGNSTAKSSPQKVDVL--CGIGIKKVACGTQFSVALTKDGHVYTF 4255

Query: 348  GKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSL 407
            G+     L  G   +   P+ +  L   +   V      T  L  TG VY +G    G L
Sbjct: 4256 GQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQL 4315

Query: 408  GFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT 446
            G    G ++ V  P ++  L+  ++ QIS G  H+   T
Sbjct: 4316 GL---GHTNHVREPTLVTVLQGKNIRQISAGRCHSAAWT 4351



 Score =  102 bits (255), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 106/379 (27%), Positives = 165/379 (43%), Gaps = 29/379 (7%)

Query: 96  FLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFT 155
           F +    +SD   T A    I TG    ++     V+  GS+    L  G   TQ     
Sbjct: 340 FEEVCRMASDYSRTCASPDSIQTGDA-PIVSETCEVYVWGSNSSHQLVEG---TQEKILQ 395

Query: 156 RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTN------RPIFRPRL 209
               PS +    + A +     +   G V  CG  S    G  D+N      +  F P  
Sbjct: 396 PKLAPSFSDAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPH- 454

Query: 210 VEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG 269
             ++K V   + + G   T   T  G V + G   +G+LGHG++  +  PK I    +  
Sbjct: 455 -RSIKKVSSSKGSDG--HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGK 511

Query: 270 SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS 329
            VV ++AG  +  AVT +G +Y++G G    LGHG+ +     R I T  +   +V  VS
Sbjct: 512 VVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNS----RNIPTLVKDISNVGEVS 567

Query: 330 AGDEHVVALDSSGY-VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTF 388
            G  H +AL   G  V+++G G  G LGHGD      P+ + +L+     +VCA  + + 
Sbjct: 568 CGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSL 627

Query: 389 VLVDTGSVYGFG---WMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVV 445
            L  TG VY +G    +G GS            LRP++++ L A  +  IS G  H + +
Sbjct: 628 SLTSTGQVYAWGCGACLGCGS-------SEATALRPKLIEELAATRIVDISIGDSHCLAL 680

Query: 446 TDRGRLFGFGDNERAQLGH 464
           +    ++ +G+N   Q G 
Sbjct: 681 SHDNEVYAWGNNSMGQCGQ 699



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 87/324 (26%), Positives = 150/324 (46%), Gaps = 13/324 (4%)

Query: 160  PSAAHVVQVSASENHAAFVLQS-GQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPC 218
            PS +   QV   +N   FV+Q+ G V  CG+ S    G  +++  +    ++ AL+G   
Sbjct: 4016 PSFSQAQQVICGQN-CTFVIQANGTVLACGEGSYGRLGQGNSDD-LHVLTVISALQGFVV 4073

Query: 219  KQVTAGLNFTGF---LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA 275
             Q+       G    LT  G V + G   +G+LGHG++  +  P+ I  L+    VVQ++
Sbjct: 4074 TQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQG-EEVVQMS 4132

Query: 276  AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHV 335
             G  +   VT +G +++FG+G    LG G   ++  P  +     +G  + +V+ G  H 
Sbjct: 4133 CGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTAL--EGYQIGQVACGLNHT 4190

Query: 336  VALDSSG-YVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 394
            +A+ + G  V+ +G G  G LG G+   K+ P+ +  L      +V    + +  L   G
Sbjct: 4191 LAVSADGSVVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDG 4250

Query: 395  SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 454
             VY FG      +G P+ G +    RP+ +  L    +  ++ G  HT+ +   G ++ +
Sbjct: 4251 HVYTFGQDRL--IGLPE-GRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAW 4307

Query: 455  GDNERAQLGHDTLRGCLEPTEIFI 478
            G N   QLG        EPT + +
Sbjct: 4308 GSNSEGQLGLGHTNHVREPTLVTV 4331



 Score = 91.3 bits (225), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 89/266 (33%), Positives = 128/266 (48%), Gaps = 14/266 (5%)

Query: 122 HTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
           HTL   +   VFS G    G LGHG  +TQ              VV VSA   H+A V +
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528

Query: 181 SGQVFTCGDNSSFCCGHRDTN-RPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH-VH 238
            G+++T G+      GH D+N R I  P LV+ +  V   +V+ G + T  L+  G  V 
Sbjct: 529 DGELYTWGEGDFGRLGHGDSNSRNI--PTLVKDISNV--GEVSCGSSHTIALSKDGRTVW 584

Query: 239 TCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
           + G   +G+LGHGDT     PK I  L+ +  + ++ AG    L++T  G VY++G G+ 
Sbjct: 585 SFGGGDNGKLGHGDTNRVYKPKVIEALQGM-FIRKVCAGSQSSLSLTSTGQVYAWGCGA- 642

Query: 299 FCLGHG-EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 357
            CLG G  +   L+P+ I+        +V +S GD H +AL     VY WG    G  G 
Sbjct: 643 -CLGCGSSEATALRPKLIEEL--AATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQ 699

Query: 358 GDEIDK-TLPEPLSSLKSHLAVQVCA 382
           G+     T P+ +S L      Q+ A
Sbjct: 700 GNSTGPITKPKKVSGLDGIAIQQISA 725



 Score = 84.0 bits (206), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 68/230 (29%), Positives = 108/230 (46%), Gaps = 11/230 (4%)

Query: 237  VHTCGSNTHGQLGH-GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 295
            V+  G+  HGQL   G  +  P   + AP        Q+  G +    +  NG V + G 
Sbjct: 3991 VYLWGAGRHGQLAEAGRNVMVP---AAAP--SFSQAQQVICGQNCTFVIQANGTVLACGE 4045

Query: 296  GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG-DEHVVALDSSGYVYTWGKGYCGA 354
            GS   LG G   D      I   +   +  +  S G D H +AL  SG V++WG G  G 
Sbjct: 4046 GSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGK 4105

Query: 355  LGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGV 414
            LGHG+   +  P  + +L+    VQ+    + + V+   G ++ FG   +G LG  +   
Sbjct: 4106 LGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN--T 4163

Query: 415  SDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGR-LFGFGDNERAQLG 463
            S+K L P  + +L  + + Q++ GL HT+ V+  G  ++ FGD +  +LG
Sbjct: 4164 SNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSVVWAFGDGDYGKLG 4212



 Score = 49.3 bits (116), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 41/143 (28%), Positives = 67/143 (46%), Gaps = 9/143 (6%)

Query: 344  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 403
            VY WG G  G L    E  + +  P ++     A QV   +  TFV+   G+V   G   
Sbjct: 3991 VYLWGAGRHGQLA---EAGRNVMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGS 4047

Query: 404  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLY---HTVVVTDRGRLFGFGDNERA 460
            +G LG   +G SD +    ++ +L+   V+Q+ T      H++ +T+ G +F +GD +  
Sbjct: 4048 YGRLG---QGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYG 4104

Query: 461  QLGHDTLRGCLEPTEIFIQEMEE 483
            +LGH        P +I   + EE
Sbjct: 4105 KLGHGNSDRQRRPRQIEALQGEE 4127



 Score = 46.6 bits (109), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 26/94 (27%), Positives = 46/94 (48%), Gaps = 2/94 (2%)

Query: 131 VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDN 190
           V++ G   C  LG G      +    I   +A  +V +S  ++H   +    +V+  G+N
Sbjct: 635 VYAWGCGAC--LGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNN 692

Query: 191 SSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           S   CG  ++  PI +P+ V  L G+  +Q++AG
Sbjct: 693 SMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAG 726


>gi|357165462|ref|XP_003580391.1| PREDICTED: uncharacterized protein LOC100842512 [Brachypodium
           distachyon]
          Length = 1023

 Score =  129 bits (323), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 98/312 (31%), Positives = 155/312 (49%), Gaps = 20/312 (6%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V  ++  ENHAA V + G+VF+ G+ SS   GH+  N  +  P+LVEAL  V  K V  G
Sbjct: 264 VQSIACGENHAAIVTKLGEVFSWGNESSRTLGHQ-INDSVSCPKLVEALASVHVKAVAFG 322

Query: 225 LNFTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYM 281
              T  +T+ G +       H  G L +    ++ +P K   P++ + SV +IA G  + 
Sbjct: 323 SKHTCAVTVSGELLEWSEGAHRLGLLSNWYERNQWSPHKLFGPMDSI-SVSKIACGEWHT 381

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL--- 338
             +T +G ++++G G+   LGHG++    +P+ +++   KG+ V  V+ G  H  A+   
Sbjct: 382 AIITSSGQLFTYGDGTFGVLGHGDKQGIARPKEVESL--KGLRVKSVACGPWHTAAVVEV 439

Query: 339 -------DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 391
                    SG ++TWG    G LGH D+  K +P  +  L S+  +QV      T VL 
Sbjct: 440 TSSFNCNAPSGKLFTWGDADRGKLGHADKKIKLVPTCVDLLTSYDFLQVSCGAALTVVLT 499

Query: 392 DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRL 451
            TG V+  G    G LG P    +D      +  +L+   V +IS+G  H  V+T +G++
Sbjct: 500 STGVVFTIGSSKHGQLGNPH---ADGESICTVEGTLKNEFVREISSGSSHVAVLTLKGQV 556

Query: 452 FGFGDNERAQLG 463
           F +G     QLG
Sbjct: 557 FTWGKGADGQLG 568



 Score = 91.7 bits (226), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 78/271 (28%), Positives = 122/271 (45%), Gaps = 17/271 (6%)

Query: 116 ITTGRYHTLLISNSSV---FSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +  G  HT  ++ S     +S G+   G+L +  E  Q           +  V +++  E
Sbjct: 319 VAFGSKHTCAVTVSGELLEWSEGAHRLGLLSNWYERNQWSPHKLFGPMDSISVSKIACGE 378

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL- 231
            H A +  SGQ+FT GD +    GH D  + I RP+ VE+LKG+  K V  G   T  + 
Sbjct: 379 WHTAIITSSGQLFTYGDGTFGVLGHGD-KQGIARPKEVESLKGLRVKSVACGPWHTAAVV 437

Query: 232 ---------TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 282
                       G + T G    G+LGH D   +  P  +  L      +Q++ G +  +
Sbjct: 438 EVTSSFNCNAPSGKLFTWGDADRGKLGHADKKIKLVPTCVDLLTSY-DFLQVSCGAALTV 496

Query: 283 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
            +T  GVV++ GS  +  LG+     E       T + +   V  +S+G  HV  L   G
Sbjct: 497 VLTSTGVVFTIGSSKHGQLGNPHADGESICTVEGTLKNE--FVREISSGSSHVAVLTLKG 554

Query: 343 YVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
            V+TWGKG  G LG GD  +++ P  + +L+
Sbjct: 555 QVFTWGKGADGQLGLGDYDNRSSPTLVEALQ 585



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 74/274 (27%), Positives = 123/274 (44%), Gaps = 17/274 (6%)

Query: 203 PIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSI 262
           P   PRLV +   +  + +  G N    +T  G V + G+ +   LGH        PK +
Sbjct: 249 PKALPRLVASTTMLDVQSIACGENHAAIVTKLGEVFSWGNESSRTLGHQINDSVSCPKLV 308

Query: 263 APLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC--LGHGEQHDELQPRAIQTFRR 320
             L  V  V  +A G  +  AVT +G +  +  G++    L +  + ++  P  +     
Sbjct: 309 EALASV-HVKAVAFGSKHTCAVTVSGELLEWSEGAHRLGLLSNWYERNQWSPHKL-FGPM 366

Query: 321 KGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQV 380
             I V +++ G+ H   + SSG ++T+G G  G LGHGD+     P+ + SLK      V
Sbjct: 367 DSISVSKIACGEWHTAIITSSGQLFTYGDGTFGVLGHGDKQGIARPKEVESLKGLRVKSV 426

Query: 381 CARKRKTFVLVD----------TGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAH 430
                 T  +V+          +G ++ +G    G LG  D+ +    L P  +D L ++
Sbjct: 427 ACGPWHTAAVVEVTSSFNCNAPSGKLFTWGDADRGKLGHADKKIK---LVPTCVDLLTSY 483

Query: 431 HVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 464
              Q+S G   TVV+T  G +F  G ++  QLG+
Sbjct: 484 DFLQVSCGAALTVVLTSTGVVFTIGSSKHGQLGN 517



 Score = 79.7 bits (195), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 63/242 (26%), Positives = 114/242 (47%), Gaps = 19/242 (7%)

Query: 246 GQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGE 305
           G +   + + +  P+ +A    +  V  IA G ++   VT  G V+S+G+ S+  LGH  
Sbjct: 240 GSMLDSEDIPKALPRLVASTTML-DVQSIACGENHAAIVTKLGEVFSWGNESSRTLGHQI 298

Query: 306 QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKG--YCGALGHGDEIDK 363
                 P+ ++      +HV  V+ G +H  A+  SG +  W +G    G L +  E ++
Sbjct: 299 NDSVSCPKLVEAL--ASVHVKAVAFGSKHTCAVTVSGELLEWSEGAHRLGLLSNWYERNQ 356

Query: 364 TLPEPLSSLKSHLAV-QVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPR 422
             P  L      ++V ++   +  T ++  +G ++ +G   FG LG  D+     + RP+
Sbjct: 357 WSPHKLFGPMDSISVSKIACGEWHTAIITSSGQLFTYGDGTFGVLGHGDK---QGIARPK 413

Query: 423 ILDSLRAHHVSQISTGLYHTVVVTD----------RGRLFGFGDNERAQLGHDTLRGCLE 472
            ++SL+   V  ++ G +HT  V +           G+LF +GD +R +LGH   +  L 
Sbjct: 414 EVESLKGLRVKSVACGPWHTAAVVEVTSSFNCNAPSGKLFTWGDADRGKLGHADKKIKLV 473

Query: 473 PT 474
           PT
Sbjct: 474 PT 475



 Score = 77.4 bits (189), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 85/349 (24%), Positives = 143/349 (40%), Gaps = 32/349 (9%)

Query: 116 ITTGRYHTLLISN-SSVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSASEN 173
           I  G  H  +++    VFS G+     LGH  +    VS  + +   ++ HV  V+    
Sbjct: 267 IACGENHAAIVTKLGEVFSWGNESSRTLGH--QINDSVSCPKLVEALASVHVKAVAFGSK 324

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHR------DTNRPIFRP-RLVEALKGVPCKQVTAGLN 226
           H   V  SG++    + +     HR         R  + P +L   +  +   ++  G  
Sbjct: 325 HTCAVTVSGELLEWSEGA-----HRLGLLSNWYERNQWSPHKLFGPMDSISVSKIACGEW 379

Query: 227 FTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV-- 284
            T  +T  G + T G  T G LGHGD      PK +  L+ +  V  +A GP +  AV  
Sbjct: 380 HTAIITSSGQLFTYGDGTFGVLGHGDKQGIARPKEVESLKGL-RVKSVACGPWHTAAVVE 438

Query: 285 --------TGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVV 336
                     +G ++++G      LGH ++  +L P  +          ++VS G    V
Sbjct: 439 VTSSFNCNAPSGKLFTWGDADRGKLGHADKKIKLVPTCVDLL--TSYDFLQVSCGAALTV 496

Query: 337 ALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSV 396
            L S+G V+T G    G LG+     +++     +LK+    ++ +      VL   G V
Sbjct: 497 VLTSTGVVFTIGSSKHGQLGNPHADGESICTVEGTLKNEFVREISSGSSHVAVLTLKGQV 556

Query: 397 YGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVV 445
           + +G    G LG  D    D    P ++++L+  HV  I+ G   +  V
Sbjct: 557 FTWGKGADGQLGLGDY---DNRSSPTLVEALQGRHVQSIACGSNFSAAV 602



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 38/155 (24%), Positives = 67/155 (43%), Gaps = 2/155 (1%)

Query: 323 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCA 382
           + V  ++ G+ H   +   G V++WG      LGH      + P+ + +L S     V  
Sbjct: 262 LDVQSIACGENHAAIVTKLGEVFSWGNESSRTLGHQINDSVSCPKLVEALASVHVKAVAF 321

Query: 383 RKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRP-RILDSLRAHHVSQISTGLYH 441
             + T  +  +G +  +   G   LG            P ++   + +  VS+I+ G +H
Sbjct: 322 GSKHTCAVTVSGELLEWS-EGAHRLGLLSNWYERNQWSPHKLFGPMDSISVSKIACGEWH 380

Query: 442 TVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 476
           T ++T  G+LF +GD     LGH   +G   P E+
Sbjct: 381 TAIITSSGQLFTYGDGTFGVLGHGDKQGIARPKEV 415


>gi|114630760|ref|XP_001167652.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 4
           [Pan troglodytes]
          Length = 979

 Score =  129 bits (323), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 91/276 (32%), Positives = 142/276 (51%), Gaps = 10/276 (3%)

Query: 204 IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 263
           +  PR  +       + V  GL  T F+   G V+TCG N  GQLGH  +  R  P+ + 
Sbjct: 22  VLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKS--RKKPEQVV 79

Query: 264 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH-GEQHDELQPRAIQTFRRKG 322
            L+   ++V ++ G ++ LA+   G VY++G  S+  LG  G +     PR I++     
Sbjct: 80  ALD-AQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSL--SD 136

Query: 323 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK-TLPEPLSSLKSHLAVQVC 381
           I +V+V+ G  H +AL  +  V+ WG+   G LG G +  K T P+ L SL     +QV 
Sbjct: 137 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVA 196

Query: 382 ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYH 441
           A    +FVL  +G+++G+G   FG LG  D   +D+ + P +L SLR+  +  I  G  H
Sbjct: 197 AGGAHSFVLTLSGAIFGWGRNKFGQLGLNDE--NDRYV-PNLLKSLRSQKIVYICCGEDH 253

Query: 442 TVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF 477
           T  +T  G +F FG     QLGH++    + P ++F
Sbjct: 254 TAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVF 289



 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 104/333 (31%), Positives = 153/333 (45%), Gaps = 13/333 (3%)

Query: 135 GSSLCGVLGHGPETTQCVSFTRI-NFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSF 193
           G++  G LG G    + V   R  +F     V  V     H  FVL  G V+TCG N   
Sbjct: 5   GNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGCNDLG 64

Query: 194 CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGH-GD 252
             GH  + +   +P  V AL       V+ G   T  L  +G V+  G ++ GQLG  G 
Sbjct: 65  QLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGS 121

Query: 253 TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ-HDELQ 311
                 P++I  L ++  +VQ+A G  + LA++    V+ +G      LG G     +  
Sbjct: 122 EECIRVPRNIKSLSDI-QIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTS 180

Query: 312 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSS 371
           P+ +++    GI  ++V+AG  H   L  SG ++ WG+   G LG  DE D+ +P  L S
Sbjct: 181 PQLLKSLL--GIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKS 238

Query: 372 LKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHH 431
           L+S   V +C  +  T  L   G V+ FG  G+G LG      +   + PR +  L    
Sbjct: 239 LRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG---HNSTSHEINPRKVFELMGSI 295

Query: 432 VSQISTGLYHT-VVVTDRGRLFGFGDNERAQLG 463
           V+QI+ G  HT   V   GR++ FG     QLG
Sbjct: 296 VTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  109 bits (272), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 79/291 (27%), Positives = 138/291 (47%), Gaps = 8/291 (2%)

Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 179
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V VS  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVSCGEAHTLALN 100

Query: 180 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 239
             GQV+  G +S    G   +   I  PR +++L  +   QV  G   +  L+    V  
Sbjct: 101 DKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFC 160

Query: 240 CGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
            G N +GQLG G D   + +P+ +  L  +   +Q+AAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKYGQLGLGTDCKKQTSPQLLKSLLGI-PFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 299 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 358
             LG  +++D   P  +++ R + I  V +  G++H  AL   G V+T+G G  G LGH 
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRSQKI--VYICCGEDHTAALTKEGGVFTFGAGGYGQLGHN 277

Query: 359 DEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLG 408
               +  P  +  L   +  Q+ C R+  +  +  +G +Y FG  G G LG
Sbjct: 278 STSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  101 bits (251), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 84/274 (30%), Positives = 132/274 (48%), Gaps = 10/274 (3%)

Query: 98  QSVEHSSDIVETSAGNM-QITTGRYHTLLISNS-SVFSCGSSLCGVLGH-GPETTQCVSF 154
           +S +    +V   A N+  ++ G  HTL +++   V++ G    G LG  G E  +C+  
Sbjct: 70  KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGSE--ECIRV 127

Query: 155 TR-INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEAL 213
            R I   S   +VQV+    H+  + ++ +VF  G N     G     +    P+L+++L
Sbjct: 128 PRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSL 187

Query: 214 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
            G+P  QV AG   +  LT+ G +   G N  GQLG  D  DR  P  +  L     +V 
Sbjct: 188 LGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRS-QKIVY 246

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           I  G  +  A+T  G V++FG+G    LGH     E+ PR +  F   G  V +++ G +
Sbjct: 247 ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQ 304

Query: 334 HVVA-LDSSGYVYTWGKGYCGALGHGDEIDKTLP 366
           H  A + SSG +Y++G G  G LG G   ++  P
Sbjct: 305 HTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 66/206 (32%), Positives = 99/206 (48%), Gaps = 6/206 (2%)

Query: 114 MQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +Q+  G YH+L +S +S VF  G +  G LG G +  +  S   +        +QV+A  
Sbjct: 140 VQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGG 199

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            H+  +  SG +F  G N     G  D N   + P L+++L+      +  G + T  LT
Sbjct: 200 AHSFVLTLSGAIFGWGRNKFGQLGLNDENDR-YVPNLLKSLRSQKIVYICCGEDHTAALT 258

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVV 290
             G V T G+  +GQLGH  T     P+ +   E +GS+V QIA G  +  A V  +G +
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRI 316

Query: 291 YSFGSGSNFCLGHGEQHDELQPRAIQ 316
           YSFG G N  LG G   +   P  ++
Sbjct: 317 YSFGLGGNGQLGTGSTSNRKSPFTVK 342


>gi|37620181|ref|NP_056416.2| probable E3 ubiquitin-protein ligase HERC4 isoform b [Homo sapiens]
 gi|24659293|gb|AAH39600.1| Hect domain and RLD 4 [Homo sapiens]
 gi|119574646|gb|EAW54261.1| hect domain and RLD 4, isoform CRA_b [Homo sapiens]
 gi|119574648|gb|EAW54263.1| hect domain and RLD 4, isoform CRA_b [Homo sapiens]
 gi|325463745|gb|ADZ15643.1| hect domain and RLD 4 [synthetic construct]
          Length = 1049

 Score =  129 bits (323), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 91/276 (32%), Positives = 142/276 (51%), Gaps = 10/276 (3%)

Query: 204 IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 263
           +  PR  +       + V  GL  T F+   G V+TCG N  GQLGH  +  R  P+ + 
Sbjct: 22  VLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKS--RKKPEQVV 79

Query: 264 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH-GEQHDELQPRAIQTFRRKG 322
            L+   ++V ++ G ++ LA+   G VY++G  S+  LG  G +     PR I++     
Sbjct: 80  ALD-AQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSL--SD 136

Query: 323 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK-TLPEPLSSLKSHLAVQVC 381
           I +V+V+ G  H +AL  +  V+ WG+   G LG G +  K T P+ L SL     +QV 
Sbjct: 137 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVA 196

Query: 382 ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYH 441
           A    +FVL  +G+++G+G   FG LG  D   +D+ + P +L SLR+  +  I  G  H
Sbjct: 197 AGGAHSFVLTLSGAIFGWGRNKFGQLGLNDE--NDRYV-PNLLKSLRSQKIVYICCGEDH 253

Query: 442 TVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF 477
           T  +T  G +F FG     QLGH++    + P ++F
Sbjct: 254 TAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVF 289



 Score =  122 bits (305), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 103/333 (30%), Positives = 153/333 (45%), Gaps = 13/333 (3%)

Query: 135 GSSLCGVLGHGPETTQCVSFTRI-NFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSF 193
           G++  G LG G    + V   R  +F     V  V     H  FVL  G V+TCG N   
Sbjct: 5   GNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGCNDLG 64

Query: 194 CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGH-GD 252
             GH  + +   +P  V AL       V+ G   T  L  +G V+  G ++ GQLG  G 
Sbjct: 65  QLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGS 121

Query: 253 TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ-HDELQ 311
                 P++I  L ++  +VQ+A G  + LA++    V+ +G      LG G     +  
Sbjct: 122 EECIRVPRNIKSLSDI-QIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTS 180

Query: 312 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSS 371
           P+ +++    GI  ++V+AG  H   L  SG ++ WG+   G LG  DE D+ +P  L S
Sbjct: 181 PQLLKSLL--GIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKS 238

Query: 372 LKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHH 431
           L+S   V +C  +  T  L   G V+ FG  G+G LG      +   + PR +  L    
Sbjct: 239 LRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG---HNSTSHEINPRKVFELMGSI 295

Query: 432 VSQISTGLYHT-VVVTDRGRLFGFGDNERAQLG 463
           V++I+ G  HT   V   GR++ FG     QLG
Sbjct: 296 VTEIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 78/291 (26%), Positives = 138/291 (47%), Gaps = 8/291 (2%)

Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 179
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V VS  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVSCGEAHTLALN 100

Query: 180 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 239
             GQV+  G +S    G   +   I  PR +++L  +   QV  G   +  L+    V  
Sbjct: 101 DKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFC 160

Query: 240 CGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
            G N +GQLG G D   + +P+ +  L  +   +Q+AAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKYGQLGLGTDCKKQTSPQLLKSLLGI-PFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 299 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 358
             LG  +++D   P  +++ R + I  V +  G++H  AL   G V+T+G G  G LGH 
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRSQKI--VYICCGEDHTAALTKEGGVFTFGAGGYGQLGHN 277

Query: 359 DEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLG 408
               +  P  +  L   +  ++ C R+  +  +  +G +Y FG  G G LG
Sbjct: 278 STSHEINPRKVFELMGSIVTEIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 84/274 (30%), Positives = 131/274 (47%), Gaps = 10/274 (3%)

Query: 98  QSVEHSSDIVETSAGNM-QITTGRYHTLLISNS-SVFSCGSSLCGVLGH-GPETTQCVSF 154
           +S +    +V   A N+  ++ G  HTL +++   V++ G    G LG  G E  +C+  
Sbjct: 70  KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGSE--ECIRV 127

Query: 155 TR-INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEAL 213
            R I   S   +VQV+    H+  + ++ +VF  G N     G     +    P+L+++L
Sbjct: 128 PRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSL 187

Query: 214 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
            G+P  QV AG   +  LT+ G +   G N  GQLG  D  DR  P  +  L     +V 
Sbjct: 188 LGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRS-QKIVY 246

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           I  G  +  A+T  G V++FG+G    LGH     E+ PR +  F   G  V  ++ G +
Sbjct: 247 ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTEIACGRQ 304

Query: 334 HVVA-LDSSGYVYTWGKGYCGALGHGDEIDKTLP 366
           H  A + SSG +Y++G G  G LG G   ++  P
Sbjct: 305 HTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338



 Score = 78.6 bits (192), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 65/206 (31%), Positives = 99/206 (48%), Gaps = 6/206 (2%)

Query: 114 MQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +Q+  G YH+L +S +S VF  G +  G LG G +  +  S   +        +QV+A  
Sbjct: 140 VQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGG 199

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            H+  +  SG +F  G N     G  D N   + P L+++L+      +  G + T  LT
Sbjct: 200 AHSFVLTLSGAIFGWGRNKFGQLGLNDENDR-YVPNLLKSLRSQKIVYICCGEDHTAALT 258

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVV 290
             G V T G+  +GQLGH  T     P+ +   E +GS+V +IA G  +  A V  +G +
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTEIACGRQHTSAFVPSSGRI 316

Query: 291 YSFGSGSNFCLGHGEQHDELQPRAIQ 316
           YSFG G N  LG G   +   P  ++
Sbjct: 317 YSFGLGGNGQLGTGSTSNRKSPFTVK 342


>gi|449504701|ref|XP_002190698.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 [Taeniopygia
           guttata]
          Length = 991

 Score =  129 bits (323), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 109/336 (32%), Positives = 154/336 (45%), Gaps = 13/336 (3%)

Query: 135 GSSLCGVLGHGPETTQCVSFTRI-NFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSF 193
           G++  G LG G    + V   R  +F     V  V     H  FVL  G V+TCG N   
Sbjct: 5   GNASFGQLGLGGIDEEIVLEPRKSDFFLNKRVRDVGCGLRHTVFVLDDGTVYTCGCNDLG 64

Query: 194 CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDT 253
             GH    +   RP  V AL       V+ G   T  L  +G V+  G  T GQLG   T
Sbjct: 65  QLGHEKARK---RPEHVGALDAQNIVAVSCGEAHTLALNDKGQVYAWGLATDGQLGLPGT 121

Query: 254 LD-RPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHG-EQHDELQ 311
            +    P++I  L E+  +VQ+A G  + LA++    V+S+G      LG G E   +  
Sbjct: 122 EECVRVPRNIRSLSEI-QIVQVACGYYHSLALSKGSEVFSWGQNKYGQLGLGYEYKKQTS 180

Query: 312 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSS 371
           P+ I++    GI   +++AG  H   L  SG ++ WG+   G LG  D+ D+ +P  L S
Sbjct: 181 PQMIKSLL--GIPFAQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDDNDRYVPTLLKS 238

Query: 372 LKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHH 431
           L+S   V +C  +  T  L   G V+ FG  G+G LG      +   + PR +  L    
Sbjct: 239 LRSQKVVHICCGEDHTAALTKEGGVFTFGAGGYGQLG---HNSTSHEINPRKVFELMGSV 295

Query: 432 VSQISTGLYHTVV-VTDRGRLFGFGDNERAQLGHDT 466
           V+QI+ G  HT   V   GR++ FG     QLG  T
Sbjct: 296 VTQITCGRQHTTAFVPSSGRIYSFGLGGNGQLGTGT 331



 Score =  125 bits (314), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 90/276 (32%), Positives = 140/276 (50%), Gaps = 10/276 (3%)

Query: 204 IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 263
           +  PR  +       + V  GL  T F+   G V+TCG N  GQLGH     R  P+ + 
Sbjct: 22  VLEPRKSDFFLNKRVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKA--RKRPEHVG 79

Query: 264 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLG-HGEQHDELQPRAIQTFRRKG 322
            L+   ++V ++ G ++ LA+   G VY++G  ++  LG  G +     PR I++     
Sbjct: 80  ALD-AQNIVAVSCGEAHTLALNDKGQVYAWGLATDGQLGLPGTEECVRVPRNIRSLSE-- 136

Query: 323 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK-TLPEPLSSLKSHLAVQVC 381
           I +V+V+ G  H +AL     V++WG+   G LG G E  K T P+ + SL      Q+ 
Sbjct: 137 IQIVQVACGYYHSLALSKGSEVFSWGQNKYGQLGLGYEYKKQTSPQMIKSLLGIPFAQIA 196

Query: 382 ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYH 441
           A    +FVL  +G+++G+G   FG LG  D   +D+ + P +L SLR+  V  I  G  H
Sbjct: 197 AGGAHSFVLTLSGAIFGWGRNKFGQLGLNDD--NDRYV-PTLLKSLRSQKVVHICCGEDH 253

Query: 442 TVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF 477
           T  +T  G +F FG     QLGH++    + P ++F
Sbjct: 254 TAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVF 289



 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 80/254 (31%), Positives = 125/254 (49%), Gaps = 7/254 (2%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSASEN 173
           ++ G  HTL +++   V++ G +  G LG  P T +CV   R I   S   +VQV+    
Sbjct: 89  VSCGEAHTLALNDKGQVYAWGLATDGQLGL-PGTEECVRVPRNIRSLSEIQIVQVACGYY 147

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
           H+  + +  +VF+ G N     G     +    P+++++L G+P  Q+ AG   +  LT+
Sbjct: 148 HSLALSKGSEVFSWGQNKYGQLGLGYEYKKQTSPQMIKSLLGIPFAQIAAGGAHSFVLTL 207

Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
            G +   G N  GQLG  D  DR  P  +  L     VV I  G  +  A+T  G V++F
Sbjct: 208 SGAIFGWGRNKFGQLGLNDDNDRYVPTLLKSLRS-QKVVHICCGEDHTAALTKEGGVFTF 266

Query: 294 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA-LDSSGYVYTWGKGYC 352
           G+G    LGH     E+ PR +  F   G  V +++ G +H  A + SSG +Y++G G  
Sbjct: 267 GAGGYGQLGHNSTSHEINPRKV--FELMGSVVTQITCGRQHTTAFVPSSGRIYSFGLGGN 324

Query: 353 GALGHGDEIDKTLP 366
           G LG G   ++  P
Sbjct: 325 GQLGTGTTSNRKSP 338



 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 81/291 (27%), Positives = 134/291 (46%), Gaps = 8/291 (2%)

Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 179
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V VS  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKARKRPEHVGALD---AQNIVAVSCGEAHTLALN 100

Query: 180 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 239
             GQV+  G  +    G   T   +  PR + +L  +   QV  G   +  L+    V +
Sbjct: 101 DKGQVYAWGLATDGQLGLPGTEECVRVPRNIRSLSEIQIVQVACGYYHSLALSKGSEVFS 160

Query: 240 CGSNTHGQLGHGDTLDRPT-PKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
            G N +GQLG G    + T P+ I  L  +    QIAAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKYGQLGLGYEYKKQTSPQMIKSLLGI-PFAQIAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 299 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 358
             LG  + +D   P  +++ R +   VV +  G++H  AL   G V+T+G G  G LGH 
Sbjct: 220 GQLGLNDDNDRYVPTLLKSLRSQ--KVVHICCGEDHTAALTKEGGVFTFGAGGYGQLGHN 277

Query: 359 DEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLG 408
               +  P  +  L   +  Q+ C R+  T  +  +G +Y FG  G G LG
Sbjct: 278 STSHEINPRKVFELMGSVVTQITCGRQHTTAFVPSSGRIYSFGLGGNGQLG 328



 Score = 82.0 bits (201), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 68/206 (33%), Positives = 97/206 (47%), Gaps = 6/206 (2%)

Query: 114 MQITTGRYHTLLISN-SSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +Q+  G YH+L +S  S VFS G +  G LG G E  +  S   I         Q++A  
Sbjct: 140 VQVACGYYHSLALSKGSEVFSWGQNKYGQLGLGYEYKKQTSPQMIKSLLGIPFAQIAAGG 199

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            H+  +  SG +F  G N     G  D N   + P L+++L+      +  G + T  LT
Sbjct: 200 AHSFVLTLSGAIFGWGRNKFGQLGLNDDNDR-YVPTLLKSLRSQKVVHICCGEDHTAALT 258

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVV 290
             G V T G+  +GQLGH  T     P+ +   E +GSVV QI  G  +  A V  +G +
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSVVTQITCGRQHTTAFVPSSGRI 316

Query: 291 YSFGSGSNFCLGHGEQHDELQPRAIQ 316
           YSFG G N  LG G   +   P  ++
Sbjct: 317 YSFGLGGNGQLGTGTTSNRKSPFTVK 342


>gi|428171675|gb|EKX40590.1| hypothetical protein GUITHDRAFT_75473, partial [Guillardia theta
           CCMP2712]
          Length = 413

 Score =  129 bits (323), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 108/349 (30%), Positives = 171/349 (48%), Gaps = 29/349 (8%)

Query: 131 VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDN 190
           VF+CG +  G LGH     Q V  + +       +V+V+A    + F+ + G+V+ CG N
Sbjct: 42  VFACGQNRKGELGHSTFREQ-VEMSLVQSLRRKRIVKVAAGSETSYFLTEEGKVYCCGLN 100

Query: 191 SSFCCGH--RDT-----NRPIFRPRLVEALKGVP--CKQVTA----GLNFTGFLTIRGHV 237
           S+   G   R+T     NR       +E ++G+P  CK V      G      +T  G V
Sbjct: 101 ST---GQLARETHQGSANRSKEYSSDIELMEGLPPDCKVVQVSCFNGAEHVLVVTSAGQV 157

Query: 238 HTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY--MLAVTGNGVVYSFGS 295
           ++CG N HGQLG G T   P   S+  +E +  V  ++A  SY   + V+ +G  +SFG 
Sbjct: 158 YSCGCNNHGQLGLGSTKMSP---SLLLVESLKHVRVLSASCSYHHSVVVSSDGSAFSFGL 214

Query: 296 GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA-GDEHVVALDSSGYVYTWGKGYCGA 354
                LG G + ++L P  ++       H+VR++A G  H + L   G V++ GK   G 
Sbjct: 215 NDCGQLGIGTRPNQLLPHRVEL---PSPHLVRLAACGQYHTIFLTEEGMVFSCGKNLNGQ 271

Query: 355 LGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGV 414
           LG G      +P  +++L+   A  +      T V+++ G ++ FG+   G LG    G 
Sbjct: 272 LGLGSRSSTNVPTLIAALQERPASMIACGYSHTCVVLEDGKLFTFGYNHQGQLGL---GH 328

Query: 415 SDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 463
           +D V  P  +++LR   V +IS G + T V+++ G L+ FG N   QLG
Sbjct: 329 TDSVSSPMQVETLRNVKVVKISCGTHFTCVLSESGELWSFGCNCHGQLG 377



 Score = 77.4 bits (189), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 57/177 (32%), Positives = 91/177 (51%), Gaps = 20/177 (11%)

Query: 119 GRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ------VSAS 171
           G+YHT+ ++    VFSCG +L G LG G       S +  N P+    +Q      ++  
Sbjct: 248 GQYHTIFLTEEGMVFSCGKNLNGQLGLG-------SRSSTNVPTLIAALQERPASMIACG 300

Query: 172 ENHAAFVLQSGQVFTCGDN--SSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
            +H   VL+ G++FT G N       GH D+   +  P  VE L+ V   +++ G +FT 
Sbjct: 301 YSHTCVVLEDGKLFTFGYNHQGQLGLGHTDS---VSSPMQVETLRNVKVVKISCGTHFTC 357

Query: 230 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTG 286
            L+  G + + G N HGQLG GD+ DR  P  + P     ++ +IA G  +++A++G
Sbjct: 358 VLSESGELWSFGCNCHGQLGLGDSTDRLVP-VLVPSMTKKNLSEIACGFHHLVAISG 413



 Score = 58.2 bits (139), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 56/202 (27%), Positives = 81/202 (40%), Gaps = 16/202 (7%)

Query: 286 GNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVY 345
           G+  V++ G      LGH    ++++   +Q+ RRK   +V+V+AG E    L   G VY
Sbjct: 38  GDCGVFACGQNRKGELGHSTFREQVEMSLVQSLRRK--RIVKVAAGSETSYFLTEEGKVY 95

Query: 346 TWGKGYCGALGHGD-----------EIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 394
             G    G L                 D  L E L      + V          V+   G
Sbjct: 96  CCGLNSTGQLARETHQGSANRSKEYSSDIELMEGLPPDCKVVQVSCFNGAEHVLVVTSAG 155

Query: 395 SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 454
            VY  G    G LG     +S  +L   +++SL+   V   S   +H+VVV+  G  F F
Sbjct: 156 QVYSCGCNNHGQLGLGSTKMSPSLL---LVESLKHVRVLSASCSYHHSVVVSSDGSAFSF 212

Query: 455 GDNERAQLGHDTLRGCLEPTEI 476
           G N+  QLG  T    L P  +
Sbjct: 213 GLNDCGQLGIGTRPNQLLPHRV 234


>gi|338530520|ref|YP_004663854.1| RCC1 repeat-containing protein [Myxococcus fulvus HW-1]
 gi|337256616|gb|AEI62776.1| RCC1 repeat-containing protein [Myxococcus fulvus HW-1]
          Length = 1457

 Score =  129 bits (323), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 116/359 (32%), Positives = 166/359 (46%), Gaps = 20/359 (5%)

Query: 107 VETSAGNMQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHV 165
           +  +A  M+I  G  H+L +S   +V++ G +  G LG   E T          PS   +
Sbjct: 45  ITVTAPPMRIAAGSQHSLYVSPTGAVWAWGGNTSGQLGG--EATPLQRLAPAPLPSPRDI 102

Query: 166 VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 225
           V V + E H+  + ++G V+  G NSS   G   T   +  P  V  L  V    V AG 
Sbjct: 103 VSVVSGEAHSLALDEAGTVWAWGGNSSGQLGDGTTTDRVT-PMQVAGLTDVVA--VAAGD 159

Query: 226 NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 285
             +  L   G V   G+N HGQLG G T    TP+ +  LE    VV +AAG  + LAV 
Sbjct: 160 FHSLALRGDGTVWAWGTNFHGQLGRGHTEPGLTPEPVPGLE---GVVALAAGFDFTLAVM 216

Query: 286 GNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVY 345
            +G V ++G+ S+  LG G     L P  ++     GI  V  +AG  H VAL   G V+
Sbjct: 217 DDGTVRAWGANSSGQLGDGTFTQRLAP--VEVAHISGISAV--TAGTYHAVALGKDGGVW 272

Query: 346 TWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFG 405
           TWG    G LG G   D+ +P  +  L+   A  V +    +  L++ GSV  +G  G G
Sbjct: 273 TWGANSSGQLGDGAWSDRAVPARVPGLERVKA--VASMDASSLALLEAGSVLAWGANGSG 330

Query: 406 SLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 464
            LG  D G  D+   P  +  LR+  V+ +  G  H + +   G L+ +G     QLGH
Sbjct: 331 QLG--DSGTDDRAT-PGEVPGLRS--VAAVVGGAQHALALRGDGTLWAWGGGLAGQLGH 384



 Score =  119 bits (298), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 103/376 (27%), Positives = 174/376 (46%), Gaps = 25/376 (6%)

Query: 112  GNMQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSA 170
            G   ++ GR  +L +  + + ++ G++  G LG G   +Q V        S   V  +SA
Sbjct: 951  GVASVSAGRAFSLAVRQDGTAWAWGANPSGQLGDGTNHSQRVPK---QVTSVKRVRAMSA 1007

Query: 171  SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
              +H   + + G V+T GDN+    G   +      PR V  L+ V  + V AG  F+  
Sbjct: 1008 GAHHVVALGEDGAVWTWGDNTLGQLGDGTSAPTWMWPRQVPELRDV--EAVAAGEQFSVA 1065

Query: 231  LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSI----APLEEVGSVVQIAAGPSYMLAVTG 286
            + + G  H  GSN +GQLG G T  R TP  +    + L +   V  + A   + +A+  
Sbjct: 1066 VLVGGGAHAWGSNEYGQLGDGKTGPRLTPVQVRIEASKLRQ--PVRTVRAWAQHAVALMA 1123

Query: 287  NGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYT 346
            +G V ++G  ++  LG G       P  ++        VV VS G  H +AL S G V+ 
Sbjct: 1124 DGTVQAWGDNAHGQLGDGTTERRAAPVVVRGL----TGVVAVSTGAWHSLALRSDGTVWA 1179

Query: 347  WGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGS 406
            WG    G LG G  + +T P  ++ L+    V + A       +   GSV+ +G+  FG 
Sbjct: 1180 WGANGFGQLGDGTTLSRTTPVRVAGLQK--VVAIGAGGYHALAVRSDGSVWAWGYNAFGQ 1237

Query: 407  LGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDT 466
            LG    G ++  L P  ++ L   +V+ ++ G +H++ +   G L  +G+N   QLG  T
Sbjct: 1238 LG---DGTAESRLLPVRVEGL--SNVTSVAGGDHHSLALLADGSLGAWGNNAAGQLGDGT 1292

Query: 467  LRGCLEPTEIFIQEME 482
              G    + ++++ ++
Sbjct: 1293 --GTTRYSRVWVKGVD 1306



 Score =  111 bits (278), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 110/365 (30%), Positives = 163/365 (44%), Gaps = 27/365 (7%)

Query: 116 ITTGRYHTLL-ISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           +  G +H+L  + + +V+S G +  G LG G   T       +     + +  V+AS +H
Sbjct: 405 MAAGSFHSLAALGDGTVWSWGRNTYGQLGDG---TTAERHAAVRVEGLSGIRGVAASGHH 461

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 234
           +  V   G V+  G N++   G   T R   RP  V  L  V    V  G + T  L   
Sbjct: 462 SLAVGADGTVWAWGRNAAGQLGDGST-RDRARPVAVSGLTSVVA--VATGGSHTMALRGD 518

Query: 235 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 294
           G V   G N  GQLG G T+DR TP  +A L+   SVV +AAG  + +A+ G+G V+++G
Sbjct: 519 GTVWAWGYNALGQLGDGTTVDRLTPVRVARLD---SVVAVAAGTYFSMALRGDGTVWTWG 575

Query: 295 SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGA 354
            G    +G G     L P  +        +V RV+AG  H +A+   G V+ WG    G 
Sbjct: 576 EGFEGQVGDGGGVQRLFPVQVAGL----TNVTRVAAGSAHALAVRGDGTVWAWGDNGEGQ 631

Query: 355 LGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGV 414
           LG G   D+  P  +  L    A  V   +  +  L   GSV  +G+ G+G LG    G 
Sbjct: 632 LGDGTWSDRFRPVQVPGLTGITA--VSGGRSHSMALHGDGSVRAWGYNGYGQLG---DGT 686

Query: 415 SDKVLRPRI---LDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCL 471
               +RP +   L  ++A H S +     H + +   G L G+G N   QLG        
Sbjct: 687 FTSRVRPAVVPGLTGIQALHPSHL-----HVLALHADGTLRGWGYNRFGQLGLGAAGWSS 741

Query: 472 EPTEI 476
            P ++
Sbjct: 742 RPVQV 746



 Score =  102 bits (253), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 111/368 (30%), Positives = 159/368 (43%), Gaps = 23/368 (6%)

Query: 114  MQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
            M +  G  H L    + ++++ G++  G LG G  T    S T +       V  VSA  
Sbjct: 903  MSVALGETHGLAAGEDGALWAWGANGSGQLGEGSTTP---SPTPVRVKGLEGVASVSAGR 959

Query: 173  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
              +  V Q G  +  G N S   G   TN     P+ V ++K V  + ++AG +    L 
Sbjct: 960  AFSLAVRQDGTAWAWGANPSGQLGD-GTNHSQRVPKQVTSVKRV--RAMSAGAHHVVALG 1016

Query: 233  IRGHVHTCGSNTHGQLGHGDTLDRPT---PKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 289
              G V T G NT GQLG G +   PT   P+ +  L +V +V   AAG  + +AV   G 
Sbjct: 1017 EDGAVWTWGDNTLGQLGDGTSA--PTWMWPRQVPELRDVEAV---AAGEQFSVAVLVGGG 1071

Query: 290  VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVR-VSAGDEHVVALDSSGYVYTWG 348
             +++GS     LG G+    L P  ++    K    VR V A  +H VAL + G V  WG
Sbjct: 1072 AHAWGSNEYGQLGDGKTGPRLTPVQVRIEASKLRQPVRTVRAWAQHAVALMADGTVQAWG 1131

Query: 349  KGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLG 408
                G LG G    +  P  +  L   +AV   A    +  L   G+V+ +G  GFG LG
Sbjct: 1132 DNAHGQLGDGTTERRAAPVVVRGLTGVVAVSTGAWH--SLALRSDGTVWAWGANGFGQLG 1189

Query: 409  FPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLR 468
                G +     P  +  L+   V  I  G YH + V   G ++ +G N   QLG  T  
Sbjct: 1190 ---DGTTLSRTTPVRVAGLQ--KVVAIGAGGYHALAVRSDGSVWAWGYNAFGQLGDGTAE 1244

Query: 469  GCLEPTEI 476
              L P  +
Sbjct: 1245 SRLLPVRV 1252



 Score =  102 bits (253), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 105/370 (28%), Positives = 159/370 (42%), Gaps = 27/370 (7%)

Query: 120  RYHTLLISNSSVFSCGSSLCGVLGHG---PETTQC---VSFTRINFPSAAHVVQVSASEN 173
            ++   ++      + GS+  G LG G   P  T     +  +++  P    V  V A   
Sbjct: 1061 QFSVAVLVGGGAHAWGSNEYGQLGDGKTGPRLTPVQVRIEASKLRQP----VRTVRAWAQ 1116

Query: 174  HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
            HA  ++  G V   GDN+    G   T R    P +V  L GV    V+ G   +  L  
Sbjct: 1117 HAVALMADGTVQAWGDNAHGQLGDGTTERRAA-PVVVRGLTGVVA--VSTGAWHSLALRS 1173

Query: 234  RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
             G V   G+N  GQLG G TL R TP  +A L++V   V I AG  + LAV  +G V+++
Sbjct: 1174 DGTVWAWGANGFGQLGDGTTLSRTTPVRVAGLQKV---VAIGAGGYHALAVRSDGSVWAW 1230

Query: 294  GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 353
            G  +   LG G     L P  ++       +V  V+ GD H +AL + G +  WG    G
Sbjct: 1231 GYNAFGQLGDGTAESRLLPVRVEGLS----NVTSVAGGDHHSLALLADGSLGAWGNNAAG 1286

Query: 354  ALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRG 413
             LG G    +     +  +     V+V A    T  L   G+V+ +G      LG  D  
Sbjct: 1287 QLGDGTGTTRYSRVWVKGVDG--VVEVRAGAAHTLALRGDGTVWTWGDNTHSQLGAGDDS 1344

Query: 414  VSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEP 473
               +++ PR +  L    V+ I  G  H+  V  +G ++ +G N   QLG        EP
Sbjct: 1345 TRTRIV-PRPVPGLSG--VTAIGAGARHSFAVGPKGTVWAWGRNSHGQLGLGDNANRAEP 1401

Query: 474  TEIFIQEMEE 483
              + ++E+ E
Sbjct: 1402 --LRVKELAE 1409



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 99/355 (27%), Positives = 158/355 (44%), Gaps = 21/355 (5%)

Query: 116  ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
            + +G  H+L ++ + SV++ G++  G LG G   ++ +   R++    A  V      + 
Sbjct: 805  VASGVLHSLALACDGSVWAWGANGRGQLGDGTTASRVIP-ARVDGLQGAVAVAAGGDASL 863

Query: 175  AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI- 233
            A  +L  G  +  G N+    G   T+      R V     +P   ++  L  T  L   
Sbjct: 864  A--LLADGTAWAWGANAHGQLGDGSTSD-----RAVPGQLKLPSNIMSVALGETHGLAAG 916

Query: 234  -RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
              G +   G+N  GQLG G T   PTP  +  LE V SV   +AG ++ LAV  +G  ++
Sbjct: 917  EDGALWAWGANGSGQLGEGSTTPSPTPVRVKGLEGVASV---SAGRAFSLAVRQDGTAWA 973

Query: 293  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 352
            +G+  +  LG G  H +  P+ + + +R    V  +SAG  HVVAL   G V+TWG    
Sbjct: 974  WGANPSGQLGDGTNHSQRVPKQVTSVKR----VRAMSAGAHHVVALGEDGAVWTWGDNTL 1029

Query: 353  GALGHGDEIDKTL-PEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 411
            G LG G      + P  +  L+   A  V A ++ +  ++  G  + +G   +G LG   
Sbjct: 1030 GQLGDGTSAPTWMWPRQVPELRDVEA--VAAGEQFSVAVLVGGGAHAWGSNEYGQLGDGK 1087

Query: 412  RGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDT 466
             G     ++ RI  S     V  +     H V +   G +  +GDN   QLG  T
Sbjct: 1088 TGPRLTPVQVRIEASKLRQPVRTVRAWAQHAVALMADGTVQAWGDNAHGQLGDGT 1142



 Score = 96.3 bits (238), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 98/367 (26%), Positives = 156/367 (42%), Gaps = 22/367 (5%)

Query: 115  QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
            ++  GR HTL++  + +V + G +  G LG G  T +         P    V  V++   
Sbjct: 754  RLAVGRAHTLMVRPDGAVLAWGENASGQLGDGTTTHRAGPVLVRGVPC---VRSVASGVL 810

Query: 174  HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
            H+  +   G V+  G N     G   T   +  P  V+ L+G          +    L  
Sbjct: 811  HSLALACDGSVWAWGANGRGQLGDGTTASRVI-PARVDGLQGAVAVAAGGDASLA--LLA 867

Query: 234  RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
             G     G+N HGQLG G T DR  P     L+   +++ +A G ++ LA   +G ++++
Sbjct: 868  DGTAWAWGANAHGQLGDGSTSDRAVPGQ---LKLPSNIMSVALGETHGLAAGEDGALWAW 924

Query: 294  GSGSNFCLGHGEQHDELQPRAIQTFRRKGIH-VVRVSAGDEHVVALDSSGYVYTWGKGYC 352
            G+  +  LG G       P      R KG+  V  VSAG    +A+   G  + WG    
Sbjct: 925  GANGSGQLGEGSTTPSPTP-----VRVKGLEGVASVSAGRAFSLAVRQDGTAWAWGANPS 979

Query: 353  GALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDR 412
            G LG G    + +P+ ++S+K   A+   A       L + G+V+ +G    G LG  D 
Sbjct: 980  GQLGDGTNHSQRVPKQVTSVKRVRAMSAGAHH--VVALGEDGAVWTWGDNTLGQLG--DG 1035

Query: 413  GVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLE 472
              +   + PR +  LR   V  ++ G   +V V   G    +G NE  QLG       L 
Sbjct: 1036 TSAPTWMWPRQVPELR--DVEAVAAGEQFSVAVLVGGGAHAWGSNEYGQLGDGKTGPRLT 1093

Query: 473  PTEIFIQ 479
            P ++ I+
Sbjct: 1094 PVQVRIE 1100



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 94/356 (26%), Positives = 149/356 (41%), Gaps = 28/356 (7%)

Query: 125 LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQV 184
           L+   SV + G++  G LG      +    T    P    V  V     HA  +   G +
Sbjct: 315 LLEAGSVLAWGANGSGQLGDSGTDDRA---TPGEVPGLRSVAAVVGGAQHALALRGDGTL 371

Query: 185 FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI-RGHVHTCGSN 243
           +  G   +   GH  + R +    L   L+      + AG +F     +  G V + G N
Sbjct: 372 WAWGGGLAGQLGHGGSERHVVPAPL---LRLADVASMAAG-SFHSLAALGDGTVWSWGRN 427

Query: 244 THGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH 303
           T+GQLG G T +R    +   +E +  +  +AA   + LAV  +G V+++G  +   LG 
Sbjct: 428 TYGQLGDGTTAER---HAAVRVEGLSGIRGVAASGHHSLAVGADGTVWAWGRNAAGQLGD 484

Query: 304 GEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK 363
           G   D  +P A+         VV V+ G  H +AL   G V+ WG    G LG G  +D+
Sbjct: 485 GSTRDRARPVAVSGL----TSVVAVATGGSHTMALRGDGTVWAWGYNALGQLGDGTTVDR 540

Query: 364 TLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKV---LR 420
             P  ++ L S   V V A    +  L   G+V+ +G       GF  +         L 
Sbjct: 541 LTPVRVARLDS--VVAVAAGTYFSMALRGDGTVWTWG------EGFEGQVGDGGGVQRLF 592

Query: 421 PRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 476
           P  +  L   +V++++ G  H + V   G ++ +GDN   QLG  T      P ++
Sbjct: 593 PVQVAGLT--NVTRVAAGSAHALAVRGDGTVWAWGDNGEGQLGDGTWSDRFRPVQV 646



 Score = 85.1 bits (209), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 75/256 (29%), Positives = 119/256 (46%), Gaps = 16/256 (6%)

Query: 114  MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
            + I  G YH L + S+ SV++ G +  G LG G   ++ +    +     ++V  V+  +
Sbjct: 1209 VAIGAGGYHALAVRSDGSVWAWGYNAFGQLGDGTAESRLLP---VRVEGLSNVTSVAGGD 1265

Query: 173  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            +H+  +L  G +   G+N++   G   T    +    V+ + GV   +V AG   T  L 
Sbjct: 1266 HHSLALLADGSLGAWGNNAAGQLGD-GTGTTRYSRVWVKGVDGV--VEVRAGAAHTLALR 1322

Query: 233  IRGHVHTCGSNTHGQLGHGD--TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 290
              G V T G NTH QLG GD  T  R  P+   P+  +  V  I AG  +  AV   G V
Sbjct: 1323 GDGTVWTWGDNTHSQLGAGDDSTRTRIVPR---PVPGLSGVTAIGAGARHSFAVGPKGTV 1379

Query: 291  YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKG 350
            +++G  S+  LG G+  +  +P  ++        V  VS G +  +A+   G V +WG  
Sbjct: 1380 WAWGRNSHGQLGLGDNANRAEPLRVKEL----AEVSVVSGGADFSLAMQRDGTVSSWGSS 1435

Query: 351  YCGALGHGDEIDKTLP 366
              GALG G    ++ P
Sbjct: 1436 LHGALGLGTAGQRSSP 1451



 Score = 77.4 bits (189), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 66/225 (29%), Positives = 102/225 (45%), Gaps = 14/225 (6%)

Query: 254 LDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH--DELQ 311
           L++P       +      ++IAAG  + L V+  G V+++G  ++  LG GE      L 
Sbjct: 34  LEQPRAARTQRITVTAPPMRIAAGSQHSLYVSPTGAVWAWGGNTSGQLG-GEATPLQRLA 92

Query: 312 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSS 371
           P  + + R     +V V +G+ H +ALD +G V+ WG    G LG G   D+  P  ++ 
Sbjct: 93  PAPLPSPR----DIVSVVSGEAHSLALDEAGTVWAWGGNSSGQLGDGTTTDRVTPMQVAG 148

Query: 372 LKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHH 431
           L     V V A    +  L   G+V+ +G    G LG   RG ++  L P  +  L    
Sbjct: 149 LTD--VVAVAAGDFHSLALRGDGTVWAWGTNFHGQLG---RGHTEPGLTPEPVPGLEG-- 201

Query: 432 VSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 476
           V  ++ G   T+ V D G +  +G N   QLG  T    L P E+
Sbjct: 202 VVALAAGFDFTLAVMDDGTVRAWGANSSGQLGDGTFTQRLAPVEV 246



 Score = 76.3 bits (186), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 99/378 (26%), Positives = 158/378 (41%), Gaps = 41/378 (10%)

Query: 115 QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
           ++  G  H L +  + +V++ G +  G LG G   T    F  +  P    +  VS   +
Sbjct: 604 RVAAGSAHALAVRGDGTVWAWGDNGEGQLGDG---TWSDRFRPVQVPGLTGITAVSGGRS 660

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRD-TNRPIFRPRLVEALKGV----PCKQVTAGLNFT 228
           H+  +   G V   G N     G    T+R   RP +V  L G+    P       L+  
Sbjct: 661 HSMALHGDGSVRAWGYNGYGQLGDGTFTSR--VRPAVVPGLTGIQALHPSHLHVLALHAD 718

Query: 229 GFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG 288
           G  T+RG     G N  GQLG G       P  +  L   G V ++A G ++ L V  +G
Sbjct: 719 G--TLRG----WGYNRFGQLGLGAAGWSSRPVQVRGL---GRVDRLAVGRAHTLMVRPDG 769

Query: 289 VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVR-VSAGDEHVVALDSSGYVYTW 347
            V ++G  ++  LG G       P  +     +G+  VR V++G  H +AL   G V+ W
Sbjct: 770 AVLAWGENASGQLGDGTTTHRAGPVLV-----RGVPCVRSVASGVLHSLALACDGSVWAW 824

Query: 348 GKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSL 407
           G    G LG G    + +P  +  L+   AV V A    +  L+  G+ + +G    G L
Sbjct: 825 GANGRGQLGDGTTASRVIPARVDGLQG--AVAVAAGGDASLALLADGTAWAWGANAHGQL 882

Query: 408 G---FPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 464
           G     DR V  ++  P         ++  ++ G  H +   + G L+ +G N   QLG 
Sbjct: 883 GDGSTSDRAVPGQLKLP--------SNIMSVALGETHGLAAGEDGALWAWGANGSGQLGE 934

Query: 465 DTLRGCLEPTEIFIQEME 482
            +      PT + ++ +E
Sbjct: 935 GST--TPSPTPVRVKGLE 950



 Score = 48.9 bits (115), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 47/166 (28%), Positives = 74/166 (44%), Gaps = 5/166 (3%)

Query: 99   SVEHSSDIVETSAGNMQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRI 157
            +  +S   V+   G +++  G  HTL L  + +V++ G +    LG G ++T+     R 
Sbjct: 1294 TTRYSRVWVKGVDGVVEVRAGAAHTLALRGDGTVWTWGDNTHSQLGAGDDSTRTRIVPR- 1352

Query: 158  NFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVP 217
              P  + V  + A   H+  V   G V+  G NS    G  D N     P  V+ L  V 
Sbjct: 1353 PVPGLSGVTAIGAGARHSFAVGPKGTVWAWGRNSHGQLGLGD-NANRAEPLRVKELAEVS 1411

Query: 218  CKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 263
               V+ G +F+  +   G V + GS+ HG LG G    R +P  +A
Sbjct: 1412 V--VSGGADFSLAMQRDGTVSSWGSSLHGALGLGTAGQRSSPGQVA 1455


>gi|397520491|ref|XP_003830350.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
           [Pan paniscus]
 gi|410221280|gb|JAA07859.1| hect domain and RLD 4 [Pan troglodytes]
 gi|410259924|gb|JAA17928.1| hect domain and RLD 4 [Pan troglodytes]
          Length = 1049

 Score =  129 bits (323), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 91/276 (32%), Positives = 142/276 (51%), Gaps = 10/276 (3%)

Query: 204 IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 263
           +  PR  +       + V  GL  T F+   G V+TCG N  GQLGH  +  R  P+ + 
Sbjct: 22  VLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKS--RKKPEQVV 79

Query: 264 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH-GEQHDELQPRAIQTFRRKG 322
            L+   ++V ++ G ++ LA+   G VY++G  S+  LG  G +     PR I++     
Sbjct: 80  ALD-AQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSL--SD 136

Query: 323 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK-TLPEPLSSLKSHLAVQVC 381
           I +V+V+ G  H +AL  +  V+ WG+   G LG G +  K T P+ L SL     +QV 
Sbjct: 137 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVA 196

Query: 382 ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYH 441
           A    +FVL  +G+++G+G   FG LG  D   +D+ + P +L SLR+  +  I  G  H
Sbjct: 197 AGGAHSFVLTLSGAIFGWGRNKFGQLGLNDE--NDRYV-PNLLKSLRSQKIVYICCGEDH 253

Query: 442 TVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF 477
           T  +T  G +F FG     QLGH++    + P ++F
Sbjct: 254 TAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVF 289



 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 104/333 (31%), Positives = 153/333 (45%), Gaps = 13/333 (3%)

Query: 135 GSSLCGVLGHGPETTQCVSFTRI-NFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSF 193
           G++  G LG G    + V   R  +F     V  V     H  FVL  G V+TCG N   
Sbjct: 5   GNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGCNDLG 64

Query: 194 CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGH-GD 252
             GH  + +   +P  V AL       V+ G   T  L  +G V+  G ++ GQLG  G 
Sbjct: 65  QLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGS 121

Query: 253 TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ-HDELQ 311
                 P++I  L ++  +VQ+A G  + LA++    V+ +G      LG G     +  
Sbjct: 122 EECIRVPRNIKSLSDI-QIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTS 180

Query: 312 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSS 371
           P+ +++    GI  ++V+AG  H   L  SG ++ WG+   G LG  DE D+ +P  L S
Sbjct: 181 PQLLKSLL--GIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKS 238

Query: 372 LKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHH 431
           L+S   V +C  +  T  L   G V+ FG  G+G LG      +   + PR +  L    
Sbjct: 239 LRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG---HNSTSHEINPRKVFELMGSI 295

Query: 432 VSQISTGLYHT-VVVTDRGRLFGFGDNERAQLG 463
           V+QI+ G  HT   V   GR++ FG     QLG
Sbjct: 296 VTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  109 bits (272), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 79/291 (27%), Positives = 138/291 (47%), Gaps = 8/291 (2%)

Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 179
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V VS  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVSCGEAHTLALN 100

Query: 180 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 239
             GQV+  G +S    G   +   I  PR +++L  +   QV  G   +  L+    V  
Sbjct: 101 DKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFC 160

Query: 240 CGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
            G N +GQLG G D   + +P+ +  L  +   +Q+AAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKYGQLGLGTDCKKQTSPQLLKSLLGI-PFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 299 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 358
             LG  +++D   P  +++ R + I  V +  G++H  AL   G V+T+G G  G LGH 
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRSQKI--VYICCGEDHTAALTKEGGVFTFGAGGYGQLGHN 277

Query: 359 DEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLG 408
               +  P  +  L   +  Q+ C R+  +  +  +G +Y FG  G G LG
Sbjct: 278 STSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 84/274 (30%), Positives = 132/274 (48%), Gaps = 10/274 (3%)

Query: 98  QSVEHSSDIVETSAGNM-QITTGRYHTLLISNS-SVFSCGSSLCGVLGH-GPETTQCVSF 154
           +S +    +V   A N+  ++ G  HTL +++   V++ G    G LG  G E  +C+  
Sbjct: 70  KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGSE--ECIRV 127

Query: 155 TR-INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEAL 213
            R I   S   +VQV+    H+  + ++ +VF  G N     G     +    P+L+++L
Sbjct: 128 PRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSL 187

Query: 214 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
            G+P  QV AG   +  LT+ G +   G N  GQLG  D  DR  P  +  L     +V 
Sbjct: 188 LGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRS-QKIVY 246

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           I  G  +  A+T  G V++FG+G    LGH     E+ PR +  F   G  V +++ G +
Sbjct: 247 ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQ 304

Query: 334 HVVA-LDSSGYVYTWGKGYCGALGHGDEIDKTLP 366
           H  A + SSG +Y++G G  G LG G   ++  P
Sbjct: 305 HTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338



 Score = 79.7 bits (195), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 66/206 (32%), Positives = 99/206 (48%), Gaps = 6/206 (2%)

Query: 114 MQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +Q+  G YH+L +S +S VF  G +  G LG G +  +  S   +        +QV+A  
Sbjct: 140 VQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGG 199

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            H+  +  SG +F  G N     G  D N   + P L+++L+      +  G + T  LT
Sbjct: 200 AHSFVLTLSGAIFGWGRNKFGQLGLNDENDR-YVPNLLKSLRSQKIVYICCGEDHTAALT 258

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVV 290
             G V T G+  +GQLGH  T     P+ +   E +GS+V QIA G  +  A V  +G +
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRI 316

Query: 291 YSFGSGSNFCLGHGEQHDELQPRAIQ 316
           YSFG G N  LG G   +   P  ++
Sbjct: 317 YSFGLGGNGQLGTGSTSNRKSPFTVK 342


>gi|114630758|ref|XP_001167783.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 9
           [Pan troglodytes]
 gi|410295450|gb|JAA26325.1| hect domain and RLD 4 [Pan troglodytes]
 gi|410333083|gb|JAA35488.1| hect domain and RLD 4 [Pan troglodytes]
          Length = 1049

 Score =  129 bits (323), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 91/276 (32%), Positives = 142/276 (51%), Gaps = 10/276 (3%)

Query: 204 IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 263
           +  PR  +       + V  GL  T F+   G V+TCG N  GQLGH  +  R  P+ + 
Sbjct: 22  VLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKS--RKKPEQVV 79

Query: 264 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH-GEQHDELQPRAIQTFRRKG 322
            L+   ++V ++ G ++ LA+   G VY++G  S+  LG  G +     PR I++     
Sbjct: 80  ALD-AQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSL--SD 136

Query: 323 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK-TLPEPLSSLKSHLAVQVC 381
           I +V+V+ G  H +AL  +  V+ WG+   G LG G +  K T P+ L SL     +QV 
Sbjct: 137 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVA 196

Query: 382 ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYH 441
           A    +FVL  +G+++G+G   FG LG  D   +D+ + P +L SLR+  +  I  G  H
Sbjct: 197 AGGAHSFVLTLSGAIFGWGRNKFGQLGLNDE--NDRYV-PNLLKSLRSQKIVYICCGEDH 253

Query: 442 TVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF 477
           T  +T  G +F FG     QLGH++    + P ++F
Sbjct: 254 TAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVF 289



 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 104/333 (31%), Positives = 153/333 (45%), Gaps = 13/333 (3%)

Query: 135 GSSLCGVLGHGPETTQCVSFTRI-NFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSF 193
           G++  G LG G    + V   R  +F     V  V     H  FVL  G V+TCG N   
Sbjct: 5   GNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGCNDLG 64

Query: 194 CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGH-GD 252
             GH  + +   +P  V AL       V+ G   T  L  +G V+  G ++ GQLG  G 
Sbjct: 65  QLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGS 121

Query: 253 TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ-HDELQ 311
                 P++I  L ++  +VQ+A G  + LA++    V+ +G      LG G     +  
Sbjct: 122 EECIRVPRNIKSLSDI-QIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTS 180

Query: 312 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSS 371
           P+ +++    GI  ++V+AG  H   L  SG ++ WG+   G LG  DE D+ +P  L S
Sbjct: 181 PQLLKSLL--GIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKS 238

Query: 372 LKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHH 431
           L+S   V +C  +  T  L   G V+ FG  G+G LG      +   + PR +  L    
Sbjct: 239 LRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG---HNSTSHEINPRKVFELMGSI 295

Query: 432 VSQISTGLYHT-VVVTDRGRLFGFGDNERAQLG 463
           V+QI+ G  HT   V   GR++ FG     QLG
Sbjct: 296 VTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  109 bits (272), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 79/291 (27%), Positives = 138/291 (47%), Gaps = 8/291 (2%)

Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 179
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V VS  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVSCGEAHTLALN 100

Query: 180 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 239
             GQV+  G +S    G   +   I  PR +++L  +   QV  G   +  L+    V  
Sbjct: 101 DKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFC 160

Query: 240 CGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
            G N +GQLG G D   + +P+ +  L  +   +Q+AAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKYGQLGLGTDCKKQTSPQLLKSLLGI-PFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 299 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 358
             LG  +++D   P  +++ R + I  V +  G++H  AL   G V+T+G G  G LGH 
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRSQKI--VYICCGEDHTAALTKEGGVFTFGAGGYGQLGHN 277

Query: 359 DEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLG 408
               +  P  +  L   +  Q+ C R+  +  +  +G +Y FG  G G LG
Sbjct: 278 STSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 84/274 (30%), Positives = 132/274 (48%), Gaps = 10/274 (3%)

Query: 98  QSVEHSSDIVETSAGNM-QITTGRYHTLLISNS-SVFSCGSSLCGVLGH-GPETTQCVSF 154
           +S +    +V   A N+  ++ G  HTL +++   V++ G    G LG  G E  +C+  
Sbjct: 70  KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGSE--ECIRV 127

Query: 155 TR-INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEAL 213
            R I   S   +VQV+    H+  + ++ +VF  G N     G     +    P+L+++L
Sbjct: 128 PRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSL 187

Query: 214 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
            G+P  QV AG   +  LT+ G +   G N  GQLG  D  DR  P  +  L     +V 
Sbjct: 188 LGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRS-QKIVY 246

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           I  G  +  A+T  G V++FG+G    LGH     E+ PR +  F   G  V +++ G +
Sbjct: 247 ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQ 304

Query: 334 HVVA-LDSSGYVYTWGKGYCGALGHGDEIDKTLP 366
           H  A + SSG +Y++G G  G LG G   ++  P
Sbjct: 305 HTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338



 Score = 80.1 bits (196), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 66/206 (32%), Positives = 99/206 (48%), Gaps = 6/206 (2%)

Query: 114 MQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +Q+  G YH+L +S +S VF  G +  G LG G +  +  S   +        +QV+A  
Sbjct: 140 VQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGG 199

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            H+  +  SG +F  G N     G  D N   + P L+++L+      +  G + T  LT
Sbjct: 200 AHSFVLTLSGAIFGWGRNKFGQLGLNDENDR-YVPNLLKSLRSQKIVYICCGEDHTAALT 258

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVV 290
             G V T G+  +GQLGH  T     P+ +   E +GS+V QIA G  +  A V  +G +
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRI 316

Query: 291 YSFGSGSNFCLGHGEQHDELQPRAIQ 316
           YSFG G N  LG G   +   P  ++
Sbjct: 317 YSFGLGGNGQLGTGSTSNRKSPFTVK 342


>gi|426364912|ref|XP_004049535.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
           [Gorilla gorilla gorilla]
          Length = 1057

 Score =  129 bits (323), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 91/276 (32%), Positives = 142/276 (51%), Gaps = 10/276 (3%)

Query: 204 IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 263
           +  PR  +       + V  GL  T F+   G V+TCG N  GQLGH  +  R  P+ + 
Sbjct: 22  VLEPRKSDFFINKRIRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKS--RKKPEQVV 79

Query: 264 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH-GEQHDELQPRAIQTFRRKG 322
            L+   ++V ++ G ++ LA+   G VY++G  S+  LG  G +     PR I++     
Sbjct: 80  ALD-AQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSL--SD 136

Query: 323 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK-TLPEPLSSLKSHLAVQVC 381
           I +V+V+ G  H +AL  +  V+ WG+   G LG G +  K T P+ L SL     +QV 
Sbjct: 137 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVA 196

Query: 382 ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYH 441
           A    +FVL  +G+++G+G   FG LG  D   +D+ + P +L SLR+  +  I  G  H
Sbjct: 197 AGGAHSFVLTLSGAIFGWGRNKFGQLGLNDE--NDRYV-PNLLKSLRSQKIVYICCGEDH 253

Query: 442 TVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF 477
           T  +T  G +F FG     QLGH++    + P ++F
Sbjct: 254 TAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVF 289



 Score =  121 bits (304), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 93/293 (31%), Positives = 139/293 (47%), Gaps = 12/293 (4%)

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
           H  FVL  G V+TCG N     GH  + +   +P  V AL       V+ G   T  L  
Sbjct: 45  HTVFVLDDGTVYTCGCNDLGQLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLALND 101

Query: 234 RGHVHTCGSNTHGQLGH-GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
           +G V+  G ++ GQLG  G       P++I  L ++  +VQ+A G  + LA++    V+ 
Sbjct: 102 KGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSLSDI-QIVQVACGYYHSLALSKASEVFC 160

Query: 293 FGSGSNFCLGHGEQ-HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 351
           +G      LG G     +  P+ +++    GI  ++V+AG  H   L  SG ++ WG+  
Sbjct: 161 WGQNKYGQLGLGTDCKKQTSPQLLKSLL--GIPFMQVAAGGAHSFVLTLSGAIFGWGRNK 218

Query: 352 CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 411
            G LG  DE D+ +P  L SL+S   V +C  +  T  L   G V+ FG  G+G LG   
Sbjct: 219 FGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG--- 275

Query: 412 RGVSDKVLRPRILDSLRAHHVSQISTGLYHT-VVVTDRGRLFGFGDNERAQLG 463
              +   + PR +  L    V++I+ G  HT   V   GR++ FG     QLG
Sbjct: 276 HNSTSHEINPRKVFELMGSIVTEIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  108 bits (269), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 78/291 (26%), Positives = 138/291 (47%), Gaps = 8/291 (2%)

Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 179
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V VS  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVSCGEAHTLALN 100

Query: 180 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 239
             GQV+  G +S    G   +   I  PR +++L  +   QV  G   +  L+    V  
Sbjct: 101 DKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFC 160

Query: 240 CGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
            G N +GQLG G D   + +P+ +  L  +   +Q+AAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKYGQLGLGTDCKKQTSPQLLKSLLGI-PFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 299 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 358
             LG  +++D   P  +++ R + I  V +  G++H  AL   G V+T+G G  G LGH 
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRSQKI--VYICCGEDHTAALTKEGGVFTFGAGGYGQLGHN 277

Query: 359 DEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLG 408
               +  P  +  L   +  ++ C R+  +  +  +G +Y FG  G G LG
Sbjct: 278 STSHEINPRKVFELMGSIVTEIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 84/274 (30%), Positives = 131/274 (47%), Gaps = 10/274 (3%)

Query: 98  QSVEHSSDIVETSAGNM-QITTGRYHTLLISNS-SVFSCGSSLCGVLGH-GPETTQCVSF 154
           +S +    +V   A N+  ++ G  HTL +++   V++ G    G LG  G E  +C+  
Sbjct: 70  KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGSE--ECIRV 127

Query: 155 TR-INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEAL 213
            R I   S   +VQV+    H+  + ++ +VF  G N     G     +    P+L+++L
Sbjct: 128 PRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSL 187

Query: 214 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
            G+P  QV AG   +  LT+ G +   G N  GQLG  D  DR  P  +  L     +V 
Sbjct: 188 LGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRS-QKIVY 246

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           I  G  +  A+T  G V++FG+G    LGH     E+ PR +  F   G  V  ++ G +
Sbjct: 247 ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTEIACGRQ 304

Query: 334 HVVA-LDSSGYVYTWGKGYCGALGHGDEIDKTLP 366
           H  A + SSG +Y++G G  G LG G   ++  P
Sbjct: 305 HTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338



 Score = 78.6 bits (192), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 65/206 (31%), Positives = 99/206 (48%), Gaps = 6/206 (2%)

Query: 114 MQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +Q+  G YH+L +S +S VF  G +  G LG G +  +  S   +        +QV+A  
Sbjct: 140 VQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGG 199

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            H+  +  SG +F  G N     G  D N   + P L+++L+      +  G + T  LT
Sbjct: 200 AHSFVLTLSGAIFGWGRNKFGQLGLNDENDR-YVPNLLKSLRSQKIVYICCGEDHTAALT 258

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVV 290
             G V T G+  +GQLGH  T     P+ +   E +GS+V +IA G  +  A V  +G +
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTEIACGRQHTSAFVPSSGRI 316

Query: 291 YSFGSGSNFCLGHGEQHDELQPRAIQ 316
           YSFG G N  LG G   +   P  ++
Sbjct: 317 YSFGLGGNGQLGTGSTSNRKSPFTVK 342


>gi|297686828|ref|XP_002820940.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
           [Pongo abelii]
          Length = 979

 Score =  129 bits (323), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 91/276 (32%), Positives = 142/276 (51%), Gaps = 10/276 (3%)

Query: 204 IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 263
           +  PR  +       + V  GL  T F+   G V+TCG N  GQLGH  +  R  P+ + 
Sbjct: 22  VLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKS--RKKPEQVV 79

Query: 264 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH-GEQHDELQPRAIQTFRRKG 322
            L+   ++V ++ G ++ LA+   G VY++G  S+  LG  G +     PR I++     
Sbjct: 80  ALD-AQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSL--SD 136

Query: 323 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK-TLPEPLSSLKSHLAVQVC 381
           I +V+V+ G  H +AL  +  V+ WG+   G LG G +  K T P+ L SL     +QV 
Sbjct: 137 IQIVQVACGYCHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVA 196

Query: 382 ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYH 441
           A    +FVL  +G+++G+G   FG LG  D   +D+ + P +L SLR+  +  I  G  H
Sbjct: 197 AGGAHSFVLTLSGAIFGWGRNKFGQLGLNDE--NDRYV-PNLLKSLRSQKIVYICCGEDH 253

Query: 442 TVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF 477
           T  +T  G +F FG     QLGH++    + P ++F
Sbjct: 254 TAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVF 289



 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 104/333 (31%), Positives = 153/333 (45%), Gaps = 13/333 (3%)

Query: 135 GSSLCGVLGHGPETTQCVSFTRI-NFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSF 193
           G++  G LG G    + V   R  +F     V  V     H  FVL  G V+TCG N   
Sbjct: 5   GNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLG 64

Query: 194 CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGH-GD 252
             GH  + +   +P  V AL       V+ G   T  L  +G V+  G ++ GQLG  G 
Sbjct: 65  QLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGS 121

Query: 253 TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ-HDELQ 311
                 P++I  L ++  +VQ+A G  + LA++    V+ +G      LG G     +  
Sbjct: 122 EECIRVPRNIKSLSDI-QIVQVACGYCHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTS 180

Query: 312 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSS 371
           P+ +++    GI  ++V+AG  H   L  SG ++ WG+   G LG  DE D+ +P  L S
Sbjct: 181 PQLLKSLL--GIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKS 238

Query: 372 LKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHH 431
           L+S   V +C  +  T  L   G V+ FG  G+G LG      +   + PR +  L    
Sbjct: 239 LRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG---HNSTSHEINPRKVFELMGSI 295

Query: 432 VSQISTGLYHT-VVVTDRGRLFGFGDNERAQLG 463
           V+QI+ G  HT   V   GR++ FG     QLG
Sbjct: 296 VTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  108 bits (270), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 79/291 (27%), Positives = 138/291 (47%), Gaps = 8/291 (2%)

Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 179
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V VS  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVSCGEAHTLALN 100

Query: 180 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 239
             GQV+  G +S    G   +   I  PR +++L  +   QV  G   +  L+    V  
Sbjct: 101 DKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYCHSLALSKASEVFC 160

Query: 240 CGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
            G N +GQLG G D   + +P+ +  L  +   +Q+AAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKYGQLGLGTDCKKQTSPQLLKSLLGI-PFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 299 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 358
             LG  +++D   P  +++ R + I  V +  G++H  AL   G V+T+G G  G LGH 
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRSQKI--VYICCGEDHTAALTKEGGVFTFGAGGYGQLGHN 277

Query: 359 DEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLG 408
               +  P  +  L   +  Q+ C R+  +  +  +G +Y FG  G G LG
Sbjct: 278 STSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 84/274 (30%), Positives = 132/274 (48%), Gaps = 10/274 (3%)

Query: 98  QSVEHSSDIVETSAGNM-QITTGRYHTLLISNS-SVFSCGSSLCGVLGH-GPETTQCVSF 154
           +S +    +V   A N+  ++ G  HTL +++   V++ G    G LG  G E  +C+  
Sbjct: 70  KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGSE--ECIRV 127

Query: 155 TR-INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEAL 213
            R I   S   +VQV+    H+  + ++ +VF  G N     G     +    P+L+++L
Sbjct: 128 PRNIKSLSDIQIVQVACGYCHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSL 187

Query: 214 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
            G+P  QV AG   +  LT+ G +   G N  GQLG  D  DR  P  +  L     +V 
Sbjct: 188 LGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRS-QKIVY 246

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           I  G  +  A+T  G V++FG+G    LGH     E+ PR +  F   G  V +++ G +
Sbjct: 247 ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQ 304

Query: 334 HVVA-LDSSGYVYTWGKGYCGALGHGDEIDKTLP 366
           H  A + SSG +Y++G G  G LG G   ++  P
Sbjct: 305 HTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338



 Score = 76.3 bits (186), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 65/206 (31%), Positives = 98/206 (47%), Gaps = 6/206 (2%)

Query: 114 MQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +Q+  G  H+L +S +S VF  G +  G LG G +  +  S   +        +QV+A  
Sbjct: 140 VQVACGYCHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGG 199

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            H+  +  SG +F  G N     G  D N   + P L+++L+      +  G + T  LT
Sbjct: 200 AHSFVLTLSGAIFGWGRNKFGQLGLNDENDR-YVPNLLKSLRSQKIVYICCGEDHTAALT 258

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVV 290
             G V T G+  +GQLGH  T     P+ +   E +GS+V QIA G  +  A V  +G +
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRI 316

Query: 291 YSFGSGSNFCLGHGEQHDELQPRAIQ 316
           YSFG G N  LG G   +   P  ++
Sbjct: 317 YSFGLGGNGQLGTGSTSNRKSPFTVK 342


>gi|397520493|ref|XP_003830351.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
           [Pan paniscus]
 gi|410221282|gb|JAA07860.1| hect domain and RLD 4 [Pan troglodytes]
 gi|410259926|gb|JAA17929.1| hect domain and RLD 4 [Pan troglodytes]
          Length = 1057

 Score =  129 bits (323), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 91/276 (32%), Positives = 142/276 (51%), Gaps = 10/276 (3%)

Query: 204 IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 263
           +  PR  +       + V  GL  T F+   G V+TCG N  GQLGH  +  R  P+ + 
Sbjct: 22  VLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKS--RKKPEQVV 79

Query: 264 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH-GEQHDELQPRAIQTFRRKG 322
            L+   ++V ++ G ++ LA+   G VY++G  S+  LG  G +     PR I++     
Sbjct: 80  ALD-AQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSL--SD 136

Query: 323 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK-TLPEPLSSLKSHLAVQVC 381
           I +V+V+ G  H +AL  +  V+ WG+   G LG G +  K T P+ L SL     +QV 
Sbjct: 137 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVA 196

Query: 382 ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYH 441
           A    +FVL  +G+++G+G   FG LG  D   +D+ + P +L SLR+  +  I  G  H
Sbjct: 197 AGGAHSFVLTLSGAIFGWGRNKFGQLGLNDE--NDRYV-PNLLKSLRSQKIVYICCGEDH 253

Query: 442 TVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF 477
           T  +T  G +F FG     QLGH++    + P ++F
Sbjct: 254 TAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVF 289



 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 104/333 (31%), Positives = 153/333 (45%), Gaps = 13/333 (3%)

Query: 135 GSSLCGVLGHGPETTQCVSFTRI-NFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSF 193
           G++  G LG G    + V   R  +F     V  V     H  FVL  G V+TCG N   
Sbjct: 5   GNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGCNDLG 64

Query: 194 CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGH-GD 252
             GH  + +   +P  V AL       V+ G   T  L  +G V+  G ++ GQLG  G 
Sbjct: 65  QLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGS 121

Query: 253 TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ-HDELQ 311
                 P++I  L ++  +VQ+A G  + LA++    V+ +G      LG G     +  
Sbjct: 122 EECIRVPRNIKSLSDI-QIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTS 180

Query: 312 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSS 371
           P+ +++    GI  ++V+AG  H   L  SG ++ WG+   G LG  DE D+ +P  L S
Sbjct: 181 PQLLKSLL--GIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKS 238

Query: 372 LKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHH 431
           L+S   V +C  +  T  L   G V+ FG  G+G LG      +   + PR +  L    
Sbjct: 239 LRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG---HNSTSHEINPRKVFELMGSI 295

Query: 432 VSQISTGLYHT-VVVTDRGRLFGFGDNERAQLG 463
           V+QI+ G  HT   V   GR++ FG     QLG
Sbjct: 296 VTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  109 bits (272), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 79/291 (27%), Positives = 138/291 (47%), Gaps = 8/291 (2%)

Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 179
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V VS  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVSCGEAHTLALN 100

Query: 180 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 239
             GQV+  G +S    G   +   I  PR +++L  +   QV  G   +  L+    V  
Sbjct: 101 DKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFC 160

Query: 240 CGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
            G N +GQLG G D   + +P+ +  L  +   +Q+AAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKYGQLGLGTDCKKQTSPQLLKSLLGI-PFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 299 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 358
             LG  +++D   P  +++ R + I  V +  G++H  AL   G V+T+G G  G LGH 
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRSQKI--VYICCGEDHTAALTKEGGVFTFGAGGYGQLGHN 277

Query: 359 DEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLG 408
               +  P  +  L   +  Q+ C R+  +  +  +G +Y FG  G G LG
Sbjct: 278 STSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 84/274 (30%), Positives = 132/274 (48%), Gaps = 10/274 (3%)

Query: 98  QSVEHSSDIVETSAGNM-QITTGRYHTLLISNS-SVFSCGSSLCGVLGH-GPETTQCVSF 154
           +S +    +V   A N+  ++ G  HTL +++   V++ G    G LG  G E  +C+  
Sbjct: 70  KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGSE--ECIRV 127

Query: 155 TR-INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEAL 213
            R I   S   +VQV+    H+  + ++ +VF  G N     G     +    P+L+++L
Sbjct: 128 PRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSL 187

Query: 214 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
            G+P  QV AG   +  LT+ G +   G N  GQLG  D  DR  P  +  L     +V 
Sbjct: 188 LGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRS-QKIVY 246

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           I  G  +  A+T  G V++FG+G    LGH     E+ PR +  F   G  V +++ G +
Sbjct: 247 ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQ 304

Query: 334 HVVA-LDSSGYVYTWGKGYCGALGHGDEIDKTLP 366
           H  A + SSG +Y++G G  G LG G   ++  P
Sbjct: 305 HTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338



 Score = 79.7 bits (195), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 66/206 (32%), Positives = 99/206 (48%), Gaps = 6/206 (2%)

Query: 114 MQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +Q+  G YH+L +S +S VF  G +  G LG G +  +  S   +        +QV+A  
Sbjct: 140 VQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGG 199

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            H+  +  SG +F  G N     G  D N   + P L+++L+      +  G + T  LT
Sbjct: 200 AHSFVLTLSGAIFGWGRNKFGQLGLNDENDR-YVPNLLKSLRSQKIVYICCGEDHTAALT 258

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVV 290
             G V T G+  +GQLGH  T     P+ +   E +GS+V QIA G  +  A V  +G +
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRI 316

Query: 291 YSFGSGSNFCLGHGEQHDELQPRAIQ 316
           YSFG G N  LG G   +   P  ++
Sbjct: 317 YSFGLGGNGQLGTGSTSNRKSPFTVK 342


>gi|296083663|emb|CBI23652.3| unnamed protein product [Vitis vinifera]
          Length = 1062

 Score =  129 bits (323), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 103/330 (31%), Positives = 153/330 (46%), Gaps = 22/330 (6%)

Query: 167 QVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN 226
           +++    H A V + G+VFT G+ S    GH   N    RP LVE L       V  G  
Sbjct: 268 EIACGVRHVALVTRQGEVFTWGEESGGRLGHGIDND-FSRPHLVEFLAVNNVDFVACGEY 326

Query: 227 FTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSYMLA 283
            T  ++  G + T G  TH  G LGHG  +    PK ++ PLE +  V+ +A G  +   
Sbjct: 327 HTCAVSTSGDLFTWGDGTHNAGLLGHGTEVSHWIPKRVSGPLEGL-QVLSVACGTWHSAL 385

Query: 284 VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL----- 338
            T NG +++FG G+   LGHG++     PR +Q     G+  ++V+ G  H  A+     
Sbjct: 386 ATSNGKLFTFGDGTFGVLGHGDRESVPYPREVQIL--SGLKTIKVACGVWHTAAIIEVMS 443

Query: 339 -----DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDT 393
                 SS  ++TWG G    LGHG +    LP  +S+L  +   Q+      T  L  +
Sbjct: 444 QSGTNISSRKLFTWGDGDKHRLGHGSKETYLLPTCVSALIDYNFHQLACGHTMTVALTTS 503

Query: 394 GSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFG 453
           G V+  G   +G LG P   +SD  L   + D L    V +IS G YH  V+T R  +F 
Sbjct: 504 GHVFTMGGTAYGQLGNP---LSDGRLPCLVQDKLVGEFVEEISCGAYHVAVLTSRSEVFT 560

Query: 454 FGDNERAQLGHDTLRGCLEPTEIFIQEMEE 483
           +G     +LGH        PT  F++ +++
Sbjct: 561 WGRGANGRLGHGDTEDRRSPT--FVEALKD 588



 Score = 71.6 bits (174), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 63/226 (27%), Positives = 101/226 (44%), Gaps = 18/226 (7%)

Query: 114 MQITTGRYHTLL-ISNSSVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSAS 171
           + +  G +H+ L  SN  +F+ G    GVLGHG    + V + R +   S    ++V+  
Sbjct: 374 LSVACGTWHSALATSNGKLFTFGDGTFGVLGHGDR--ESVPYPREVQILSGLKTIKVACG 431

Query: 172 ENHAAFVL----QSG------QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQV 221
             H A ++    QSG      ++FT GD      GH  +      P  V AL      Q+
Sbjct: 432 VWHTAAIIEVMSQSGTNISSRKLFTWGDGDKHRLGH-GSKETYLLPTCVSALIDYNFHQL 490

Query: 222 TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ-IAAGPSY 280
             G   T  LT  GHV T G   +GQLG  + L       +   + VG  V+ I+ G  +
Sbjct: 491 ACGHTMTVALTTSGHVFTMGGTAYGQLG--NPLSDGRLPCLVQDKLVGEFVEEISCGAYH 548

Query: 281 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVV 326
           +  +T    V+++G G+N  LGHG+  D   P  ++  + + +  +
Sbjct: 549 VAVLTSRSEVFTWGRGANGRLGHGDTEDRRSPTFVEALKDRNVKSI 594


>gi|432847192|ref|XP_004065976.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3-like [Oryzias
           latipes]
          Length = 1049

 Score =  129 bits (323), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 92/277 (33%), Positives = 136/277 (49%), Gaps = 10/277 (3%)

Query: 203 PIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSI 262
           P+F PR+     G   K+V  G   T FL   G V+TCGSN+ GQLGH    +  +P+ +
Sbjct: 20  PVFEPRICHVFSGRGLKEVACGGQHTLFLLQDGSVYTCGSNSCGQLGHDKAGN--SPELV 77

Query: 263 APLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQ-PRAIQTFRRK 321
             L+    +  ++ G ++ +AV   G V+ +G+G    LG       ++ PR ++     
Sbjct: 78  GALD-TQKITMVSCGRAHSVAVNEQGQVFVWGAGDGGQLGLETAETAVRIPRLLKKLCDH 136

Query: 322 GIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGD-EIDKTLPEPLSSLKSHLAVQV 380
            I   +V  G++H +AL   G ++TWG+   G LG G  E  K  P P+ SL      Q+
Sbjct: 137 SIS--QVVCGNQHCIALSRDGQLFTWGQNSSGQLGLGKGETSKLSPSPVKSLAGIPLAQI 194

Query: 381 CARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLY 440
            A     F L  +G+V+G+G    G LG  D+   D+ + P  +  LR+  V  IS G  
Sbjct: 195 TAGGDHCFALSLSGAVFGWGKNKAGQLGLNDK--QDRAV-PCHIKFLRSQRVVYISCGDE 251

Query: 441 HTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF 477
           HT  +T  G LF FGD  R QLGH +    L P  + 
Sbjct: 252 HTAALTKSGGLFTFGDGSRGQLGHGSSNNELLPRRVM 288



 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 97/311 (31%), Positives = 152/311 (48%), Gaps = 14/311 (4%)

Query: 167 QVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN 226
           +V+    H  F+LQ G V+TCG NS   CG    ++    P LV AL       V+ G  
Sbjct: 37  EVACGGQHTLFLLQDGSVYTCGSNS---CGQLGHDKAGNSPELVGALDTQKITMVSCGRA 93

Query: 227 FTGFLTIRGHVHTCGSNTHGQLG--HGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 284
            +  +  +G V   G+   GQLG    +T  R  P+ +  L +  S+ Q+  G  + +A+
Sbjct: 94  HSVAVNEQGQVFVWGAGDGGQLGLETAETAVR-IPRLLKKLCD-HSISQVVCGNQHCIAL 151

Query: 285 TGNGVVYSFGSGSNFCLGHGE-QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 343
           + +G ++++G  S+  LG G+ +  +L P  +++    GI + +++AG +H  AL  SG 
Sbjct: 152 SRDGQLFTWGQNSSGQLGLGKGETSKLSPSPVKSL--AGIPLAQITAGGDHCFALSLSGA 209

Query: 344 VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 403
           V+ WGK   G LG  D+ D+ +P  +  L+S   V +      T  L  +G ++ FG   
Sbjct: 210 VFGWGKNKAGQLGLNDKQDRAVPCHIKFLRSQRVVYISCGDEHTAALTKSGGLFTFGDGS 269

Query: 404 FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV-VTDRGRLFGFGDNERAQL 462
            G LG    G S+  L PR +  L    VSQI+ G +HT+  V   G ++ FG N   QL
Sbjct: 270 RGQLG---HGSSNNELLPRRVMELMGTEVSQITCGRHHTLAFVPSSGTVYAFGCNSHGQL 326

Query: 463 GHDTLRGCLEP 473
           G   L     P
Sbjct: 327 GTGILADLRSP 337



 Score =  118 bits (295), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 95/305 (31%), Positives = 138/305 (45%), Gaps = 19/305 (6%)

Query: 112 GNMQITTGRYHTL-LISNSSVFSCGSSLCGVLGH-----GPETTQCVSFTRINFPSAAHV 165
           G  ++  G  HTL L+ + SV++CGS+ CG LGH      PE    +   +I        
Sbjct: 34  GLKEVACGGQHTLFLLQDGSVYTCGSNSCGQLGHDKAGNSPELVGALDTQKITM------ 87

Query: 166 VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 225
             VS    H+  V + GQVF  G       G       +  PRL++ L      QV  G 
Sbjct: 88  --VSCGRAHSVAVNEQGQVFVWGAGDGGQLGLETAETAVRIPRLLKKLCDHSISQVVCGN 145

Query: 226 NFTGFLTIRGHVHTCGSNTHGQLGHGD-TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 284
                L+  G + T G N+ GQLG G     + +P  +  L  +  + QI AG  +  A+
Sbjct: 146 QHCIALSRDGQLFTWGQNSSGQLGLGKGETSKLSPSPVKSLAGI-PLAQITAGGDHCFAL 204

Query: 285 TGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           + +G V+ +G      LG  ++ D   P  I+  R +   VV +S GDEH  AL  SG +
Sbjct: 205 SLSGAVFGWGKNKAGQLGLNDKQDRAVPCHIKFLRSQ--RVVYISCGDEHTAALTKSGGL 262

Query: 345 YTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMG 403
           +T+G G  G LGHG   ++ LP  +  L      Q+ C R      +  +G+VY FG   
Sbjct: 263 FTFGDGSRGQLGHGSSNNELLPRRVMELMGTEVSQITCGRHHTLAFVPSSGTVYAFGCNS 322

Query: 404 FGSLG 408
            G LG
Sbjct: 323 HGQLG 327



 Score = 70.1 bits (170), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 58/174 (33%), Positives = 82/174 (47%), Gaps = 7/174 (4%)

Query: 115 QITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
           QIT G  H   +S S +VF  G +  G LG   +  + V    I F  +  VV +S  + 
Sbjct: 193 QITAGGDHCFALSLSGAVFGWGKNKAGQLGLNDKQDRAVP-CHIKFLRSQRVVYISCGDE 251

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFT-GFLT 232
           H A + +SG +FT GD S    GH  +N  +  PR V  L G    Q+T G + T  F+ 
Sbjct: 252 HTAALTKSGGLFTFGDGSRGQLGHGSSNNELL-PRRVMELMGTEVSQITCGRHHTLAFVP 310

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTG 286
             G V+  G N+HGQLG G   D  +P    P++     + +  G  Y+   TG
Sbjct: 311 SSGTVYAFGCNSHGQLGTGILADLRSPH---PVKNDFLTLNLRKGKVYLRIDTG 361


>gi|426364910|ref|XP_004049534.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
           [Gorilla gorilla gorilla]
          Length = 1049

 Score =  129 bits (323), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 91/276 (32%), Positives = 142/276 (51%), Gaps = 10/276 (3%)

Query: 204 IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 263
           +  PR  +       + V  GL  T F+   G V+TCG N  GQLGH  +  R  P+ + 
Sbjct: 22  VLEPRKSDFFINKRIRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKS--RKKPEQVV 79

Query: 264 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH-GEQHDELQPRAIQTFRRKG 322
            L+   ++V ++ G ++ LA+   G VY++G  S+  LG  G +     PR I++     
Sbjct: 80  ALD-AQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSL--SD 136

Query: 323 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK-TLPEPLSSLKSHLAVQVC 381
           I +V+V+ G  H +AL  +  V+ WG+   G LG G +  K T P+ L SL     +QV 
Sbjct: 137 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVA 196

Query: 382 ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYH 441
           A    +FVL  +G+++G+G   FG LG  D   +D+ + P +L SLR+  +  I  G  H
Sbjct: 197 AGGAHSFVLTLSGAIFGWGRNKFGQLGLNDE--NDRYV-PNLLKSLRSQKIVYICCGEDH 253

Query: 442 TVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF 477
           T  +T  G +F FG     QLGH++    + P ++F
Sbjct: 254 TAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVF 289



 Score =  121 bits (304), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 93/293 (31%), Positives = 139/293 (47%), Gaps = 12/293 (4%)

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
           H  FVL  G V+TCG N     GH  + +   +P  V AL       V+ G   T  L  
Sbjct: 45  HTVFVLDDGTVYTCGCNDLGQLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLALND 101

Query: 234 RGHVHTCGSNTHGQLGH-GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
           +G V+  G ++ GQLG  G       P++I  L ++  +VQ+A G  + LA++    V+ 
Sbjct: 102 KGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSLSDI-QIVQVACGYYHSLALSKASEVFC 160

Query: 293 FGSGSNFCLGHGEQ-HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 351
           +G      LG G     +  P+ +++    GI  ++V+AG  H   L  SG ++ WG+  
Sbjct: 161 WGQNKYGQLGLGTDCKKQTSPQLLKSLL--GIPFMQVAAGGAHSFVLTLSGAIFGWGRNK 218

Query: 352 CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 411
            G LG  DE D+ +P  L SL+S   V +C  +  T  L   G V+ FG  G+G LG   
Sbjct: 219 FGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG--- 275

Query: 412 RGVSDKVLRPRILDSLRAHHVSQISTGLYHT-VVVTDRGRLFGFGDNERAQLG 463
              +   + PR +  L    V++I+ G  HT   V   GR++ FG     QLG
Sbjct: 276 HNSTSHEINPRKVFELMGSIVTEIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  107 bits (268), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 78/291 (26%), Positives = 138/291 (47%), Gaps = 8/291 (2%)

Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 179
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V VS  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVSCGEAHTLALN 100

Query: 180 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 239
             GQV+  G +S    G   +   I  PR +++L  +   QV  G   +  L+    V  
Sbjct: 101 DKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFC 160

Query: 240 CGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
            G N +GQLG G D   + +P+ +  L  +   +Q+AAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKYGQLGLGTDCKKQTSPQLLKSLLGI-PFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 299 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 358
             LG  +++D   P  +++ R + I  V +  G++H  AL   G V+T+G G  G LGH 
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRSQKI--VYICCGEDHTAALTKEGGVFTFGAGGYGQLGHN 277

Query: 359 DEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLG 408
               +  P  +  L   +  ++ C R+  +  +  +G +Y FG  G G LG
Sbjct: 278 STSHEINPRKVFELMGSIVTEIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 84/274 (30%), Positives = 131/274 (47%), Gaps = 10/274 (3%)

Query: 98  QSVEHSSDIVETSAGNM-QITTGRYHTLLISNS-SVFSCGSSLCGVLGH-GPETTQCVSF 154
           +S +    +V   A N+  ++ G  HTL +++   V++ G    G LG  G E  +C+  
Sbjct: 70  KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGSE--ECIRV 127

Query: 155 TR-INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEAL 213
            R I   S   +VQV+    H+  + ++ +VF  G N     G     +    P+L+++L
Sbjct: 128 PRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSL 187

Query: 214 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
            G+P  QV AG   +  LT+ G +   G N  GQLG  D  DR  P  +  L     +V 
Sbjct: 188 LGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRS-QKIVY 246

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           I  G  +  A+T  G V++FG+G    LGH     E+ PR +  F   G  V  ++ G +
Sbjct: 247 ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTEIACGRQ 304

Query: 334 HVVA-LDSSGYVYTWGKGYCGALGHGDEIDKTLP 366
           H  A + SSG +Y++G G  G LG G   ++  P
Sbjct: 305 HTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338



 Score = 78.6 bits (192), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 65/206 (31%), Positives = 99/206 (48%), Gaps = 6/206 (2%)

Query: 114 MQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +Q+  G YH+L +S +S VF  G +  G LG G +  +  S   +        +QV+A  
Sbjct: 140 VQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGG 199

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            H+  +  SG +F  G N     G  D N   + P L+++L+      +  G + T  LT
Sbjct: 200 AHSFVLTLSGAIFGWGRNKFGQLGLNDENDR-YVPNLLKSLRSQKIVYICCGEDHTAALT 258

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVV 290
             G V T G+  +GQLGH  T     P+ +   E +GS+V +IA G  +  A V  +G +
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTEIACGRQHTSAFVPSSGRI 316

Query: 291 YSFGSGSNFCLGHGEQHDELQPRAIQ 316
           YSFG G N  LG G   +   P  ++
Sbjct: 317 YSFGLGGNGQLGTGSTSNRKSPFTVK 342


>gi|383422563|gb|AFH34495.1| putative E3 ubiquitin-protein ligase HERC1 [Macaca mulatta]
          Length = 4846

 Score =  129 bits (323), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 103/339 (30%), Positives = 166/339 (48%), Gaps = 17/339 (5%)

Query: 115  QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQV---SA 170
            Q+  G+  T +I +N +V +CG    G LG G      V  T I+      V Q+     
Sbjct: 4016 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHV-LTVISALQGFVVTQLVTSCG 4074

Query: 171  SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
            S+ H+  + +SG+VF+ GD      GH +++R   RPR +EAL+G    Q++ G   +  
Sbjct: 4075 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQMSCGFKHSAV 4133

Query: 231  LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSVVQIAAGPSYMLAVTGNG 288
            +T  G + T G+  +G+LG G+T ++  P+ +  LE  ++G   Q+A G ++ LAV+ +G
Sbjct: 4134 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIG---QVACGLNHTLAVSADG 4190

Query: 289  -VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 347
             +V++FG G    LG G    +  P+ I      GI + +V+ G +  VAL   G+VYT+
Sbjct: 4191 SMVWAFGDGDYGKLGLGNSTAKSSPQKIDVL--CGIGIKKVACGTQFSVALTKDGHVYTF 4248

Query: 348  GKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSL 407
            G+     L  G   +   P+ +  L   +   V      T  L   G VY +G    G L
Sbjct: 4249 GQDRLIGLPEGRARNHNRPQQIPVLAGMIIEDVAVGAEHTLALASNGDVYAWGSNSEGQL 4308

Query: 408  GFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT 446
            G    G ++ V  P ++  L+  +V QIS G  H+   T
Sbjct: 4309 GL---GHTNHVREPTLVTGLQGKNVRQISAGRCHSAAWT 4344



 Score =  109 bits (273), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 90/315 (28%), Positives = 144/315 (45%), Gaps = 25/315 (7%)

Query: 160 PSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTN------RPIFRPRLVEAL 213
           PS +    + A +     +   G V  CG  S    G  D+N      +  F P    ++
Sbjct: 400 PSFSDAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPH--RSI 457

Query: 214 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
           K V   + + G   T   T  G V + G   +G+LGHG++  +  PK I    +   VV 
Sbjct: 458 KKVSSSKGSDG--HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVC 515

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           ++AG  +  AVT +G +Y++G G    LGHG+ +     R I T  +   +V  VS G  
Sbjct: 516 VSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNS----RNIPTLVKDISNVGEVSCGSS 571

Query: 334 HVVALDSSGY-VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVD 392
           H +AL   G  V+++G G  G LGHGD      P+ + +L+     +VCA  + +  L  
Sbjct: 572 HTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTS 631

Query: 393 TGSVYGFG---WMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRG 449
           TG VY +G    +G GS            LRP++++ L A  +  +S G  H + ++   
Sbjct: 632 TGQVYAWGCGACLGCGS-------SEATALRPKLIEELAATRIVDVSIGDSHCLALSHDN 684

Query: 450 RLFGFGDNERAQLGH 464
            ++ +G+N   Q G 
Sbjct: 685 EVYAWGNNSMGQCGQ 699



 Score = 98.6 bits (244), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 91/266 (34%), Positives = 128/266 (48%), Gaps = 14/266 (5%)

Query: 122 HTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
           HTL   +   VFS G    G LGHG  +TQ              VV VSA   H+A V +
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528

Query: 181 SGQVFTCGDNSSFCCGHRDTN-RPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH-VH 238
            G+++T G+      GH D+N R I  P LV+ +  V   +V+ G + T  L+  G  V 
Sbjct: 529 DGELYTWGEGDFGRLGHGDSNSRNI--PTLVKDISNV--GEVSCGSSHTIALSKDGRTVW 584

Query: 239 TCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
           + G   +G+LGHGDT     PK I  L+ +  + ++ AG    LA+T  G VY++G G+ 
Sbjct: 585 SFGGGDNGKLGHGDTNRVYKPKVIEALQGM-FIRKVCAGSQSSLALTSTGQVYAWGCGA- 642

Query: 299 FCLGHG-EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 357
            CLG G  +   L+P+ I+        +V VS GD H +AL     VY WG    G  G 
Sbjct: 643 -CLGCGSSEATALRPKLIEEL--AATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQ 699

Query: 358 GDEIDK-TLPEPLSSLKSHLAVQVCA 382
           G+     T P+ +S L      Q+ A
Sbjct: 700 GNSTGPITKPKKVSGLDGIAIQQISA 725



 Score = 98.2 bits (243), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 87/320 (27%), Positives = 148/320 (46%), Gaps = 13/320 (4%)

Query: 160  PSAAHVVQVSASENHAAFVLQS-GQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPC 218
            PS +   QV   +N   FV+Q+ G V  CG+ S    G  +++  +    ++ AL+G   
Sbjct: 4009 PSFSQAQQVICGQN-CTFVIQANGTVLACGEGSYGRLGQGNSDD-LHVLTVISALQGFVV 4066

Query: 219  KQVTAGLNFTGF---LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA 275
             Q+       G    LT  G V + G   +G+LGHG++  +  P+ I  L+    VVQ++
Sbjct: 4067 TQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQG-EEVVQMS 4125

Query: 276  AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHV 335
             G  +   VT +G +++FG+G    LG G   ++  P  +     +G  + +V+ G  H 
Sbjct: 4126 CGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTAL--EGYQIGQVACGLNHT 4183

Query: 336  VALDSSG-YVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 394
            +A+ + G  V+ +G G  G LG G+   K+ P+ +  L      +V    + +  L   G
Sbjct: 4184 LAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDG 4243

Query: 395  SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 454
             VY FG      +G P+ G +    RP+ +  L    +  ++ G  HT+ +   G ++ +
Sbjct: 4244 HVYTFGQDRL--IGLPE-GRARNHNRPQQIPVLAGMIIEDVAVGAEHTLALASNGDVYAW 4300

Query: 455  GDNERAQLGHDTLRGCLEPT 474
            G N   QLG        EPT
Sbjct: 4301 GSNSEGQLGLGHTNHVREPT 4320



 Score = 84.7 bits (208), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 68/230 (29%), Positives = 108/230 (46%), Gaps = 11/230 (4%)

Query: 237  VHTCGSNTHGQLGH-GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 295
            V+  G+  HGQL   G  +  P   + AP        Q+  G +    +  NG V + G 
Sbjct: 3984 VYLWGAGRHGQLAEAGRNVMVP---AAAP--SFSQAQQVICGQNCTFVIQANGTVLACGE 4038

Query: 296  GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG-DEHVVALDSSGYVYTWGKGYCGA 354
            GS   LG G   D      I   +   +  +  S G D H +AL  SG V++WG G  G 
Sbjct: 4039 GSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGK 4098

Query: 355  LGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGV 414
            LGHG+   +  P  + +L+    VQ+    + + V+   G ++ FG   +G LG  +   
Sbjct: 4099 LGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN--T 4156

Query: 415  SDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRL-FGFGDNERAQLG 463
            S+K L P  + +L  + + Q++ GL HT+ V+  G + + FGD +  +LG
Sbjct: 4157 SNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLG 4205



 Score = 60.1 bits (144), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 49/180 (27%), Positives = 82/180 (45%), Gaps = 13/180 (7%)

Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 349
           VY +GS S+  L  G Q   LQP+   +F         + AG      + + G V   GK
Sbjct: 374 VYVWGSNSSHQLVEGTQEKILQPKLAPSFS----DAQTIEAGQYCTFVISTDGSVRACGK 429

Query: 350 GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKR----KTFVLVDTGSVYGFGWMGFG 405
           G  G LG GD  +++  + L + + H +++  +  +     T      G V+ +G   +G
Sbjct: 430 GSYGRLGLGDSNNQSTLKKL-TFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYG 488

Query: 406 SLGFPDRGVSDKVLRPRILD-SLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 464
            LG    G S     P+++   L+   V  +S G  H+  VT+ G L+ +G+ +  +LGH
Sbjct: 489 KLG---HGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGH 545



 Score = 49.3 bits (116), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 29/100 (29%), Positives = 48/100 (48%), Gaps = 2/100 (2%)

Query: 125 LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQV 184
           L S   V++ G   C  LG G      +    I   +A  +V VS  ++H   +    +V
Sbjct: 629 LTSTGQVYAWGCGAC--LGCGSSEATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEV 686

Query: 185 FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           +  G+NS   CG  ++  PI +P+ V  L G+  +Q++AG
Sbjct: 687 YAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAG 726



 Score = 49.3 bits (116), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 41/143 (28%), Positives = 67/143 (46%), Gaps = 9/143 (6%)

Query: 344  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 403
            VY WG G  G L    E  + +  P ++     A QV   +  TFV+   G+V   G   
Sbjct: 3984 VYLWGAGRHGQLA---EAGRNVMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGS 4040

Query: 404  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLY---HTVVVTDRGRLFGFGDNERA 460
            +G LG   +G SD +    ++ +L+   V+Q+ T      H++ +T+ G +F +GD +  
Sbjct: 4041 YGRLG---QGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYG 4097

Query: 461  QLGHDTLRGCLEPTEIFIQEMEE 483
            +LGH        P +I   + EE
Sbjct: 4098 KLGHGNSDRQRRPRQIEALQGEE 4120


>gi|114630750|ref|XP_001167753.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 8
           [Pan troglodytes]
 gi|410295452|gb|JAA26326.1| hect domain and RLD 4 [Pan troglodytes]
 gi|410333085|gb|JAA35489.1| hect domain and RLD 4 [Pan troglodytes]
          Length = 1057

 Score =  129 bits (323), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 91/276 (32%), Positives = 142/276 (51%), Gaps = 10/276 (3%)

Query: 204 IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 263
           +  PR  +       + V  GL  T F+   G V+TCG N  GQLGH  +  R  P+ + 
Sbjct: 22  VLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKS--RKKPEQVV 79

Query: 264 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH-GEQHDELQPRAIQTFRRKG 322
            L+   ++V ++ G ++ LA+   G VY++G  S+  LG  G +     PR I++     
Sbjct: 80  ALD-AQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSL--SD 136

Query: 323 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK-TLPEPLSSLKSHLAVQVC 381
           I +V+V+ G  H +AL  +  V+ WG+   G LG G +  K T P+ L SL     +QV 
Sbjct: 137 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVA 196

Query: 382 ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYH 441
           A    +FVL  +G+++G+G   FG LG  D   +D+ + P +L SLR+  +  I  G  H
Sbjct: 197 AGGAHSFVLTLSGAIFGWGRNKFGQLGLNDE--NDRYV-PNLLKSLRSQKIVYICCGEDH 253

Query: 442 TVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF 477
           T  +T  G +F FG     QLGH++    + P ++F
Sbjct: 254 TAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVF 289



 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 104/333 (31%), Positives = 153/333 (45%), Gaps = 13/333 (3%)

Query: 135 GSSLCGVLGHGPETTQCVSFTRI-NFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSF 193
           G++  G LG G    + V   R  +F     V  V     H  FVL  G V+TCG N   
Sbjct: 5   GNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGCNDLG 64

Query: 194 CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGH-GD 252
             GH  + +   +P  V AL       V+ G   T  L  +G V+  G ++ GQLG  G 
Sbjct: 65  QLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGS 121

Query: 253 TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ-HDELQ 311
                 P++I  L ++  +VQ+A G  + LA++    V+ +G      LG G     +  
Sbjct: 122 EECIRVPRNIKSLSDI-QIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTS 180

Query: 312 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSS 371
           P+ +++    GI  ++V+AG  H   L  SG ++ WG+   G LG  DE D+ +P  L S
Sbjct: 181 PQLLKSLL--GIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKS 238

Query: 372 LKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHH 431
           L+S   V +C  +  T  L   G V+ FG  G+G LG      +   + PR +  L    
Sbjct: 239 LRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG---HNSTSHEINPRKVFELMGSI 295

Query: 432 VSQISTGLYHT-VVVTDRGRLFGFGDNERAQLG 463
           V+QI+ G  HT   V   GR++ FG     QLG
Sbjct: 296 VTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  109 bits (272), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 79/291 (27%), Positives = 138/291 (47%), Gaps = 8/291 (2%)

Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 179
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V VS  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVSCGEAHTLALN 100

Query: 180 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 239
             GQV+  G +S    G   +   I  PR +++L  +   QV  G   +  L+    V  
Sbjct: 101 DKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFC 160

Query: 240 CGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
            G N +GQLG G D   + +P+ +  L  +   +Q+AAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKYGQLGLGTDCKKQTSPQLLKSLLGI-PFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 299 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 358
             LG  +++D   P  +++ R + I  V +  G++H  AL   G V+T+G G  G LGH 
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRSQKI--VYICCGEDHTAALTKEGGVFTFGAGGYGQLGHN 277

Query: 359 DEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLG 408
               +  P  +  L   +  Q+ C R+  +  +  +G +Y FG  G G LG
Sbjct: 278 STSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 84/274 (30%), Positives = 132/274 (48%), Gaps = 10/274 (3%)

Query: 98  QSVEHSSDIVETSAGNM-QITTGRYHTLLISNS-SVFSCGSSLCGVLGH-GPETTQCVSF 154
           +S +    +V   A N+  ++ G  HTL +++   V++ G    G LG  G E  +C+  
Sbjct: 70  KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGSE--ECIRV 127

Query: 155 TR-INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEAL 213
            R I   S   +VQV+    H+  + ++ +VF  G N     G     +    P+L+++L
Sbjct: 128 PRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSL 187

Query: 214 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
            G+P  QV AG   +  LT+ G +   G N  GQLG  D  DR  P  +  L     +V 
Sbjct: 188 LGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRS-QKIVY 246

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           I  G  +  A+T  G V++FG+G    LGH     E+ PR +  F   G  V +++ G +
Sbjct: 247 ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQ 304

Query: 334 HVVA-LDSSGYVYTWGKGYCGALGHGDEIDKTLP 366
           H  A + SSG +Y++G G  G LG G   ++  P
Sbjct: 305 HTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338



 Score = 79.7 bits (195), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 66/206 (32%), Positives = 99/206 (48%), Gaps = 6/206 (2%)

Query: 114 MQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +Q+  G YH+L +S +S VF  G +  G LG G +  +  S   +        +QV+A  
Sbjct: 140 VQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGG 199

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            H+  +  SG +F  G N     G  D N   + P L+++L+      +  G + T  LT
Sbjct: 200 AHSFVLTLSGAIFGWGRNKFGQLGLNDENDR-YVPNLLKSLRSQKIVYICCGEDHTAALT 258

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVV 290
             G V T G+  +GQLGH  T     P+ +   E +GS+V QIA G  +  A V  +G +
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRI 316

Query: 291 YSFGSGSNFCLGHGEQHDELQPRAIQ 316
           YSFG G N  LG G   +   P  ++
Sbjct: 317 YSFGLGGNGQLGTGSTSNRKSPFTVK 342


>gi|125550526|gb|EAY96235.1| hypothetical protein OsI_18130 [Oryza sativa Indica Group]
          Length = 994

 Score =  128 bits (322), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 100/325 (30%), Positives = 148/325 (45%), Gaps = 19/325 (5%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V  V     HAA V ++G VFT G++S    GH  T      PRLVE+L       V  G
Sbjct: 156 VYHVDCGVRHAALVTRNGDVFTWGEDSGGRLGH-GTREDSVHPRLVESLAACNVDFVACG 214

Query: 225 LNFTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 282
              T  +T  G ++T G  TH  G LGHG       PK I+   +   V  ++ G  +  
Sbjct: 215 EFHTCAVTTTGELYTWGDGTHNVGLLGHGTDAGHWIPKRISGALDGLPVAYVSCGTWHTA 274

Query: 283 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD--- 339
            +T  G +++FG GS   LGHG       P+ +++    G+  + V+ G  H  A+    
Sbjct: 275 LITSMGQLFTFGDGSFGVLGHGNLTSISCPKEVESL--SGLKTIAVACGVWHTAAIVEVI 332

Query: 340 --------SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 391
                   S+G ++TWG G    LGHGD+  +  P  ++SL  +   +V      T  L 
Sbjct: 333 VTHSSSSVSAGKLFTWGDGDKHRLGHGDKESRLKPTCVASLIDYDFYRVACGHSLTVCLT 392

Query: 392 DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRL 451
            +G V   G   +G LG P+   SD  L   + D +   HV Q++ G YH  V+T R  +
Sbjct: 393 TSGKVLSMGNSVYGQLGNPN---SDGRLPCLVEDRIAGEHVLQVACGSYHVAVLTGRSEV 449

Query: 452 FGFGDNERAQLGHDTLRGCLEPTEI 476
           F +G     +LGH  +     PT++
Sbjct: 450 FTWGKGANGRLGHGDIEDRKVPTQV 474



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 81/272 (29%), Positives = 120/272 (44%), Gaps = 18/272 (6%)

Query: 116 ITTGRYHTLLISNSS---VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +  G +HT  ++ +     +  G+   G+LGHG +    +            V  VS   
Sbjct: 211 VACGEFHTCAVTTTGELYTWGDGTHNVGLLGHGTDAGHWIPKRISGALDGLPVAYVSCGT 270

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            H A +   GQ+FT GD S    GH +    I  P+ VE+L G+    V  G+  T  + 
Sbjct: 271 WHTALITSMGQLFTFGDGSFGVLGHGNLT-SISCPKEVESLSGLKTIAVACGVWHTAAIV 329

Query: 233 -----------IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 281
                        G + T G     +LGHGD   R  P  +A L +     ++A G S  
Sbjct: 330 EVIVTHSSSSVSAGKLFTWGDGDKHRLGHGDKESRLKPTCVASLIDY-DFYRVACGHSLT 388

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 341
           + +T +G V S G+     LG+      L P  ++  R  G HV++V+ G  HV  L   
Sbjct: 389 VCLTTSGKVLSMGNSVYGQLGNPNSDGRL-PCLVED-RIAGEHVLQVACGSYHVAVLTGR 446

Query: 342 GYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
             V+TWGKG  G LGHGD  D+ +P  + +LK
Sbjct: 447 SEVFTWGKGANGRLGHGDIEDRKVPTQVEALK 478



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 72/243 (29%), Positives = 115/243 (47%), Gaps = 25/243 (10%)

Query: 252 DTLDRPTPKS----IAPLEE--VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGE 305
           DT+ R T K+      PLE   V  V  +  G  +   VT NG V+++G  S   LGHG 
Sbjct: 131 DTIIRSTEKTDFLLPKPLESRLVLDVYHVDCGVRHAALVTRNGDVFTWGEDSGGRLGHGT 190

Query: 306 QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY--CGALGHGDEIDK 363
           + D + PR +++      +V  V+ G+ H  A+ ++G +YTWG G    G LGHG +   
Sbjct: 191 REDSVHPRLVESL--AACNVDFVACGEFHTCAVTTTGELYTWGDGTHNVGLLGHGTDAGH 248

Query: 364 TLPEPLSSLKSHLAVQ-VCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPR 422
            +P+ +S     L V  V      T ++   G ++ FG   FG LG    G    +  P+
Sbjct: 249 WIPKRISGALDGLPVAYVSCGTWHTALITSMGQLFTFGDGSFGVLG---HGNLTSISCPK 305

Query: 423 ILDSLRAHHVSQISTGLYHTVVVTD-----------RGRLFGFGDNERAQLGHDTLRGCL 471
            ++SL       ++ G++HT  + +            G+LF +GD ++ +LGH      L
Sbjct: 306 EVESLSGLKTIAVACGVWHTAAIVEVIVTHSSSSVSAGKLFTWGDGDKHRLGHGDKESRL 365

Query: 472 EPT 474
           +PT
Sbjct: 366 KPT 368



 Score = 82.8 bits (203), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 78/288 (27%), Positives = 129/288 (44%), Gaps = 19/288 (6%)

Query: 198 RDTNRPIFR-PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDR 256
           R T +  F  P+ +E+   +    V  G+     +T  G V T G ++ G+LGHG   D 
Sbjct: 135 RSTEKTDFLLPKPLESRLVLDVYHVDCGVRHAALVTRNGDVFTWGEDSGGRLGHGTREDS 194

Query: 257 PTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC--LGHGEQHDELQPRA 314
             P+ +  L    +V  +A G  +  AVT  G +Y++G G++    LGHG       P+ 
Sbjct: 195 VHPRLVESLAAC-NVDFVACGEFHTCAVTTTGELYTWGDGTHNVGLLGHGTDAGHWIPKR 253

Query: 315 IQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKS 374
           I +    G+ V  VS G  H   + S G ++T+G G  G LGHG+    + P+ + SL  
Sbjct: 254 I-SGALDGLPVAYVSCGTWHTALITSMGQLFTFGDGSFGVLGHGNLTSISCPKEVESLSG 312

Query: 375 HLAVQVCARKRKTFVLVD-----------TGSVYGFGWMGFGSLGFPDRGVSDKVLRPRI 423
              + V      T  +V+            G ++ +G      LG  D+   +  L+P  
Sbjct: 313 LKTIAVACGVWHTAAIVEVIVTHSSSSVSAGKLFTWGDGDKHRLGHGDK---ESRLKPTC 369

Query: 424 LDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCL 471
           + SL  +   +++ G   TV +T  G++   G++   QLG+    G L
Sbjct: 370 VASLIDYDFYRVACGHSLTVCLTTSGKVLSMGNSVYGQLGNPNSDGRL 417



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 60/221 (27%), Positives = 108/221 (48%), Gaps = 17/221 (7%)

Query: 116 ITTGRYHTLLISN-SSVFSCGSSLCGVLGHG-------PETTQCVSFTRI-----NFPSA 162
           ++ G +HT LI++   +F+ G    GVLGHG       P+  + +S  +           
Sbjct: 266 VSCGTWHTALITSMGQLFTFGDGSFGVLGHGNLTSISCPKEVESLSGLKTIAVACGVWHT 325

Query: 163 AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 222
           A +V+V  +  H++  + +G++FT GD      GH D    + +P  V +L      +V 
Sbjct: 326 AAIVEVIVT--HSSSSVSAGKLFTWGDGDKHRLGHGDKESRL-KPTCVASLIDYDFYRVA 382

Query: 223 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 282
            G + T  LT  G V + G++ +GQLG+ ++ D   P  +        V+Q+A G  ++ 
Sbjct: 383 CGHSLTVCLTTSGKVLSMGNSVYGQLGNPNS-DGRLPCLVEDRIAGEHVLQVACGSYHVA 441

Query: 283 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGI 323
            +TG   V+++G G+N  LGHG+  D   P  ++  + + +
Sbjct: 442 VLTGRSEVFTWGKGANGRLGHGDIEDRKVPTQVEALKDRAV 482



 Score = 55.8 bits (133), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 45/149 (30%), Positives = 67/149 (44%), Gaps = 14/149 (9%)

Query: 339 DSSGYVYTWGKGYC---------GALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFV 389
           DS G VY WG+ +C           +   ++ D  LP+PL S        V    R   +
Sbjct: 109 DSLGDVYVWGEVFCENSVRVGSDTIIRSTEKTDFLLPKPLESRLVLDVYHVDCGVRHAAL 168

Query: 390 LVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRG 449
           +   G V+ +G    G LG    G  +  + PR+++SL A +V  ++ G +HT  VT  G
Sbjct: 169 VTRNGDVFTWGEDSGGRLG---HGTREDSVHPRLVESLAACNVDFVACGEFHTCAVTTTG 225

Query: 450 RLFGFGD--NERAQLGHDTLRGCLEPTEI 476
            L+ +GD  +    LGH T  G   P  I
Sbjct: 226 ELYTWGDGTHNVGLLGHGTDAGHWIPKRI 254


>gi|380817672|gb|AFE80710.1| putative E3 ubiquitin-protein ligase HERC1 [Macaca mulatta]
          Length = 4854

 Score =  128 bits (322), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 103/339 (30%), Positives = 166/339 (48%), Gaps = 17/339 (5%)

Query: 115  QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQV---SA 170
            Q+  G+  T +I +N +V +CG    G LG G      V  T I+      V Q+     
Sbjct: 4024 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHV-LTVISALQGFVVTQLVTSCG 4082

Query: 171  SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
            S+ H+  + +SG+VF+ GD      GH +++R   RPR +EAL+G    Q++ G   +  
Sbjct: 4083 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQMSCGFKHSAV 4141

Query: 231  LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSVVQIAAGPSYMLAVTGNG 288
            +T  G + T G+  +G+LG G+T ++  P+ +  LE  ++G   Q+A G ++ LAV+ +G
Sbjct: 4142 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIG---QVACGLNHTLAVSADG 4198

Query: 289  -VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 347
             +V++FG G    LG G    +  P+ I      GI + +V+ G +  VAL   G+VYT+
Sbjct: 4199 SMVWAFGDGDYGKLGLGNSTAKSSPQKIDVL--CGIGIKKVACGTQFSVALTKDGHVYTF 4256

Query: 348  GKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSL 407
            G+     L  G   +   P+ +  L   +   V      T  L   G VY +G    G L
Sbjct: 4257 GQDRLIGLPEGRARNHNRPQQIPVLAGMIIEDVAVGAEHTLALASNGDVYAWGSNSEGQL 4316

Query: 408  GFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT 446
            G    G ++ V  P ++  L+  +V QIS G  H+   T
Sbjct: 4317 GL---GHTNHVREPTLVTGLQGKNVRQISAGRCHSAAWT 4352



 Score =  109 bits (273), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 90/315 (28%), Positives = 144/315 (45%), Gaps = 25/315 (7%)

Query: 160 PSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTN------RPIFRPRLVEAL 213
           PS +    + A +     +   G V  CG  S    G  D+N      +  F P    ++
Sbjct: 400 PSFSDAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPH--RSI 457

Query: 214 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
           K V   + + G   T   T  G V + G   +G+LGHG++  +  PK I    +   VV 
Sbjct: 458 KKVSSSKGSDG--HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVC 515

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           ++AG  +  AVT +G +Y++G G    LGHG+ +     R I T  +   +V  VS G  
Sbjct: 516 VSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNS----RNIPTLVKDISNVGEVSCGSS 571

Query: 334 HVVALDSSGY-VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVD 392
           H +AL   G  V+++G G  G LGHGD      P+ + +L+     +VCA  + +  L  
Sbjct: 572 HTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTS 631

Query: 393 TGSVYGFG---WMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRG 449
           TG VY +G    +G GS            LRP++++ L A  +  +S G  H + ++   
Sbjct: 632 TGQVYAWGCGACLGCGS-------SEATALRPKLIEELAATRIVDVSIGDSHCLALSHDN 684

Query: 450 RLFGFGDNERAQLGH 464
            ++ +G+N   Q G 
Sbjct: 685 EVYAWGNNSMGQCGQ 699



 Score = 98.6 bits (244), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 91/266 (34%), Positives = 128/266 (48%), Gaps = 14/266 (5%)

Query: 122 HTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
           HTL   +   VFS G    G LGHG  +TQ              VV VSA   H+A V +
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528

Query: 181 SGQVFTCGDNSSFCCGHRDTN-RPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH-VH 238
            G+++T G+      GH D+N R I  P LV+ +  V   +V+ G + T  L+  G  V 
Sbjct: 529 DGELYTWGEGDFGRLGHGDSNSRNI--PTLVKDISNV--GEVSCGSSHTIALSKDGRTVW 584

Query: 239 TCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
           + G   +G+LGHGDT     PK I  L+ +  + ++ AG    LA+T  G VY++G G+ 
Sbjct: 585 SFGGGDNGKLGHGDTNRVYKPKVIEALQGM-FIRKVCAGSQSSLALTSTGQVYAWGCGA- 642

Query: 299 FCLGHG-EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 357
            CLG G  +   L+P+ I+        +V VS GD H +AL     VY WG    G  G 
Sbjct: 643 -CLGCGSSEATALRPKLIEEL--AATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQ 699

Query: 358 GDEIDK-TLPEPLSSLKSHLAVQVCA 382
           G+     T P+ +S L      Q+ A
Sbjct: 700 GNSTGPITKPKKVSGLDGIAIQQISA 725



 Score = 98.2 bits (243), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 87/320 (27%), Positives = 148/320 (46%), Gaps = 13/320 (4%)

Query: 160  PSAAHVVQVSASENHAAFVLQS-GQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPC 218
            PS +   QV   +N   FV+Q+ G V  CG+ S    G  +++  +    ++ AL+G   
Sbjct: 4017 PSFSQAQQVICGQN-CTFVIQANGTVLACGEGSYGRLGQGNSDD-LHVLTVISALQGFVV 4074

Query: 219  KQVTAGLNFTGF---LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA 275
             Q+       G    LT  G V + G   +G+LGHG++  +  P+ I  L+    VVQ++
Sbjct: 4075 TQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQG-EEVVQMS 4133

Query: 276  AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHV 335
             G  +   VT +G +++FG+G    LG G   ++  P  +     +G  + +V+ G  H 
Sbjct: 4134 CGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTAL--EGYQIGQVACGLNHT 4191

Query: 336  VALDSSG-YVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 394
            +A+ + G  V+ +G G  G LG G+   K+ P+ +  L      +V    + +  L   G
Sbjct: 4192 LAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDG 4251

Query: 395  SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 454
             VY FG      +G P+ G +    RP+ +  L    +  ++ G  HT+ +   G ++ +
Sbjct: 4252 HVYTFGQDRL--IGLPE-GRARNHNRPQQIPVLAGMIIEDVAVGAEHTLALASNGDVYAW 4308

Query: 455  GDNERAQLGHDTLRGCLEPT 474
            G N   QLG        EPT
Sbjct: 4309 GSNSEGQLGLGHTNHVREPT 4328



 Score = 84.7 bits (208), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 68/230 (29%), Positives = 108/230 (46%), Gaps = 11/230 (4%)

Query: 237  VHTCGSNTHGQLGH-GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 295
            V+  G+  HGQL   G  +  P   + AP        Q+  G +    +  NG V + G 
Sbjct: 3992 VYLWGAGRHGQLAEAGRNVMVP---AAAP--SFSQAQQVICGQNCTFVIQANGTVLACGE 4046

Query: 296  GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG-DEHVVALDSSGYVYTWGKGYCGA 354
            GS   LG G   D      I   +   +  +  S G D H +AL  SG V++WG G  G 
Sbjct: 4047 GSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGK 4106

Query: 355  LGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGV 414
            LGHG+   +  P  + +L+    VQ+    + + V+   G ++ FG   +G LG  +   
Sbjct: 4107 LGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN--T 4164

Query: 415  SDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRL-FGFGDNERAQLG 463
            S+K L P  + +L  + + Q++ GL HT+ V+  G + + FGD +  +LG
Sbjct: 4165 SNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLG 4213



 Score = 59.7 bits (143), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 49/180 (27%), Positives = 82/180 (45%), Gaps = 13/180 (7%)

Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 349
           VY +GS S+  L  G Q   LQP+   +F         + AG      + + G V   GK
Sbjct: 374 VYVWGSNSSHQLVEGTQEKILQPKLAPSFS----DAQTIEAGQYCTFVISTDGSVRACGK 429

Query: 350 GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKR----KTFVLVDTGSVYGFGWMGFG 405
           G  G LG GD  +++  + L + + H +++  +  +     T      G V+ +G   +G
Sbjct: 430 GSYGRLGLGDSNNQSTLKKL-TFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYG 488

Query: 406 SLGFPDRGVSDKVLRPRILD-SLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 464
            LG    G S     P+++   L+   V  +S G  H+  VT+ G L+ +G+ +  +LGH
Sbjct: 489 KLG---HGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGH 545



 Score = 49.3 bits (116), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 29/100 (29%), Positives = 48/100 (48%), Gaps = 2/100 (2%)

Query: 125 LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQV 184
           L S   V++ G   C  LG G      +    I   +A  +V VS  ++H   +    +V
Sbjct: 629 LTSTGQVYAWGCGAC--LGCGSSEATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEV 686

Query: 185 FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           +  G+NS   CG  ++  PI +P+ V  L G+  +Q++AG
Sbjct: 687 YAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAG 726



 Score = 49.3 bits (116), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 41/143 (28%), Positives = 67/143 (46%), Gaps = 9/143 (6%)

Query: 344  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 403
            VY WG G  G L    E  + +  P ++     A QV   +  TFV+   G+V   G   
Sbjct: 3992 VYLWGAGRHGQLA---EAGRNVMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGS 4048

Query: 404  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLY---HTVVVTDRGRLFGFGDNERA 460
            +G LG   +G SD +    ++ +L+   V+Q+ T      H++ +T+ G +F +GD +  
Sbjct: 4049 YGRLG---QGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYG 4105

Query: 461  QLGHDTLRGCLEPTEIFIQEMEE 483
            +LGH        P +I   + EE
Sbjct: 4106 KLGHGNSDRQRRPRQIEALQGEE 4128


>gi|402874534|ref|XP_003901090.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Papio
            anubis]
          Length = 3314

 Score =  128 bits (322), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 103/339 (30%), Positives = 166/339 (48%), Gaps = 17/339 (5%)

Query: 115  QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQV---SA 170
            Q+  G+  T +I +N +V +CG    G LG G      V  T I+      V Q+     
Sbjct: 2484 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHV-LTVISALQGFVVTQLVTSCG 2542

Query: 171  SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
            S+ H+  + +SG+VF+ GD      GH +++R   RPR +EAL+G    Q++ G   +  
Sbjct: 2543 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQMSCGFKHSAV 2601

Query: 231  LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSVVQIAAGPSYMLAVTGNG 288
            +T  G + T G+  +G+LG G+T ++  P+ +  LE  ++G   Q+A G ++ LAV+ +G
Sbjct: 2602 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIG---QVACGLNHTLAVSADG 2658

Query: 289  -VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 347
             +V++FG G    LG G    +  P+ I      GI + +V+ G +  VAL   G+VYT+
Sbjct: 2659 SMVWAFGDGDYGKLGLGNSTAKSSPQKIDVL--CGIGIKKVACGTQFSVALTKDGHVYTF 2716

Query: 348  GKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSL 407
            G+     L  G   +   P+ +  L   +   V      T  L   G VY +G    G L
Sbjct: 2717 GQDRLIGLPEGRARNHNRPQQIPVLAGMIIEDVAVGAEHTLALASNGDVYAWGSNSEGQL 2776

Query: 408  GFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT 446
            G    G ++ V  P ++  L+  +V QIS G  H+   T
Sbjct: 2777 GL---GHTNHVREPTLVTGLQGKNVRQISAGRCHSAAWT 2812



 Score = 98.2 bits (243), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 87/320 (27%), Positives = 148/320 (46%), Gaps = 13/320 (4%)

Query: 160  PSAAHVVQVSASENHAAFVLQS-GQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPC 218
            PS +   QV   +N   FV+Q+ G V  CG+ S    G  +++  +    ++ AL+G   
Sbjct: 2477 PSFSQAQQVICGQN-CTFVIQANGTVLACGEGSYGRLGQGNSDD-LHVLTVISALQGFVV 2534

Query: 219  KQVTAGLNFTGF---LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA 275
             Q+       G    LT  G V + G   +G+LGHG++  +  P+ I  L+    VVQ++
Sbjct: 2535 TQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQG-EEVVQMS 2593

Query: 276  AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHV 335
             G  +   VT +G +++FG+G    LG G   ++  P  +     +G  + +V+ G  H 
Sbjct: 2594 CGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTAL--EGYQIGQVACGLNHT 2651

Query: 336  VALDSSG-YVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 394
            +A+ + G  V+ +G G  G LG G+   K+ P+ +  L      +V    + +  L   G
Sbjct: 2652 LAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDG 2711

Query: 395  SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 454
             VY FG      +G P+ G +    RP+ +  L    +  ++ G  HT+ +   G ++ +
Sbjct: 2712 HVYTFGQDRL--IGLPE-GRARNHNRPQQIPVLAGMIIEDVAVGAEHTLALASNGDVYAW 2768

Query: 455  GDNERAQLGHDTLRGCLEPT 474
            G N   QLG        EPT
Sbjct: 2769 GSNSEGQLGLGHTNHVREPT 2788



 Score = 84.7 bits (208), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 68/230 (29%), Positives = 108/230 (46%), Gaps = 11/230 (4%)

Query: 237  VHTCGSNTHGQLGH-GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 295
            V+  G+  HGQL   G  +  P   + AP        Q+  G +    +  NG V + G 
Sbjct: 2452 VYLWGAGRHGQLAEAGRNVMVP---AAAP--SFSQAQQVICGQNCTFVIQANGTVLACGE 2506

Query: 296  GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG-DEHVVALDSSGYVYTWGKGYCGA 354
            GS   LG G   D      I   +   +  +  S G D H +AL  SG V++WG G  G 
Sbjct: 2507 GSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGK 2566

Query: 355  LGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGV 414
            LGHG+   +  P  + +L+    VQ+    + + V+   G ++ FG   +G LG  +   
Sbjct: 2567 LGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN--T 2624

Query: 415  SDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRL-FGFGDNERAQLG 463
            S+K L P  + +L  + + Q++ GL HT+ V+  G + + FGD +  +LG
Sbjct: 2625 SNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLG 2673



 Score = 48.9 bits (115), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 41/143 (28%), Positives = 67/143 (46%), Gaps = 9/143 (6%)

Query: 344  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 403
            VY WG G  G L    E  + +  P ++     A QV   +  TFV+   G+V   G   
Sbjct: 2452 VYLWGAGRHGQLA---EAGRNVMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGS 2508

Query: 404  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLY---HTVVVTDRGRLFGFGDNERA 460
            +G LG   +G SD +    ++ +L+   V+Q+ T      H++ +T+ G +F +GD +  
Sbjct: 2509 YGRLG---QGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYG 2565

Query: 461  QLGHDTLRGCLEPTEIFIQEMEE 483
            +LGH        P +I   + EE
Sbjct: 2566 KLGHGNSDRQRRPRQIEALQGEE 2588


>gi|188038845|gb|ACD47036.1| ASL1/Herc2 fusion protein [Mus musculus]
          Length = 4746

 Score =  128 bits (322), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 95/328 (28%), Positives = 158/328 (48%), Gaps = 16/328 (4%)

Query: 161  SAAHVVQVSASENHAAFVLQSGQVFTCGD--NSSFCCGHRDTNRPIFRPRLVEALKGVPC 218
            SA +VVQV+        V   G+V++CG+  N     G      PI  PR + AL     
Sbjct: 2901 SALNVVQVAGGSKSLFAVTVEGKVYSCGEATNGRLGLGMSSGTVPI--PRQITALSSYVV 2958

Query: 219  KQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA 276
            K+V   +G      LT+ G V + G    G+LGH   ++   P+ I  L+    +  IA 
Sbjct: 2959 KKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIQALK-TKRIRDIAY 3017

Query: 277  GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEH 334
            G S+   +T +G +Y++G G    LGHG+   +L+P+ ++     G  V++V+ G  D  
Sbjct: 3018 GSSHSAPLTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLL--GHRVIQVACGSRDAQ 3075

Query: 335  VVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 394
             +AL   G V++WG G  G LG G      +P+ +  L      Q+    + +  L  +G
Sbjct: 3076 TLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSG 3135

Query: 395  SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 454
             V+ +G   +  LG    G    V +P++++ LR   +  ++ G  H + VTD G+++ +
Sbjct: 3136 VVWTWGKGDYFRLG---HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAW 3192

Query: 455  GDNERAQLGHDTLRGCLEPTEIFIQEME 482
            GDN+  Q G+ T     +PT   +Q +E
Sbjct: 3193 GDNDHGQQGNGTTTVNRKPT--LVQGLE 3218



 Score =  125 bits (314), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 93/286 (32%), Positives = 140/286 (48%), Gaps = 10/286 (3%)

Query: 183  QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 242
            +VF  G N     G    ++ I  P   E L  +   QV  G      +T+ G V++CG 
Sbjct: 2871 KVFVWGLNDKDQLGGLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYSCGE 2929

Query: 243  NTHGQLGHG-DTLDRPTPKSIAPLEE-VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 300
             T+G+LG G  +   P P+ I  L   V   V + +G  +  A+T +G V+S+G G +  
Sbjct: 2930 ATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGK 2989

Query: 301  LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 360
            LGH  + +  +PR IQ  + K I    ++ G  H   L SSG +YTWG G  G LGHGD 
Sbjct: 2990 LGHFSRMNCDKPRLIQALKTKRIR--DIAYGSSHSAPLTSSGELYTWGLGEYGRLGHGDN 3047

Query: 361  IDKTLPEPLSSLKSHLAVQVC--ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKV 418
              +  P+ +  L  H  +QV   +R  +T  L D G V+ +G   FG LG   RG S+  
Sbjct: 3048 TTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLG---RGGSEGC 3104

Query: 419  LRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 464
              P+ ++ L    V QI  G   ++ +T  G ++ +G  +  +LGH
Sbjct: 3105 NIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGH 3150



 Score =  121 bits (303), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 85/280 (30%), Positives = 139/280 (49%), Gaps = 9/280 (3%)

Query: 166  VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 225
            V V++   H   +   G+V++ G+      GH + + P  RPR++E+L+G+    V AG 
Sbjct: 3954 VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRS-PCDRPRVIESLRGIEVVDVAAGG 4012

Query: 226  NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA--AGPSYMLA 283
              +  +T  G ++T G   +G+LGH D+ D+  PK +  L+    V+ IA  +G +  L 
Sbjct: 4013 AHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQG-HRVIDIACGSGDAQTLC 4071

Query: 284  VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 343
            +T +  V+S+G G    LG G       P  I +    G+ VV+V  G +  VAL  SG 
Sbjct: 4072 LTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL--TGLGVVKVECGSQFSVALTKSGA 4129

Query: 344  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 403
            VYTWGKG    LGHG +     P  +  L+    + +           + G VY +G   
Sbjct: 4130 VYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDND 4189

Query: 404  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV 443
             G LG    G ++ + RPR++ +L+   V++++ G  HT+
Sbjct: 4190 EGQLG---DGTTNAIQRPRLVAALQGKKVNRVACGSAHTL 4226



 Score =  121 bits (303), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 82/269 (30%), Positives = 131/269 (48%), Gaps = 6/269 (2%)

Query: 207  PRLVEALKGVPCKQV--TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP 264
            P L+E+++ V  K+V   +G      L+  G V++ G    G+LGHG+      P+ I  
Sbjct: 3940 PTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIES 3999

Query: 265  LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH 324
            L  +  VV +AAG ++   VT  G +Y++G G    LGH +  D+L+P+ ++  +   + 
Sbjct: 4000 LRGI-EVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVI 4058

Query: 325  VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARK 384
             +   +GD   + L     V++WG G  G LG G      +P  + SL     V+V    
Sbjct: 4059 DIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGS 4118

Query: 385  RKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV 444
            + +  L  +G+VY +G   +  LG    G  D V RPR +  L+   V  I+TG  H V 
Sbjct: 4119 QFSVALTKSGAVYTWGKGDYHRLG---HGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 4175

Query: 445  VTDRGRLFGFGDNERAQLGHDTLRGCLEP 473
             T+ G ++ +GDN+  QLG  T      P
Sbjct: 4176 CTEDGEVYTWGDNDEGQLGDGTTNAIQRP 4204



 Score =  118 bits (296), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 87/304 (28%), Positives = 148/304 (48%), Gaps = 23/304 (7%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V+QV+ +E     + ++G+V+T   NS            +  P+LV+ L      ++ A 
Sbjct: 364 VMQVACAEKRFLILSRNGRVYTQAYNSD-----------MLAPQLVQGLASRNIVKIAAH 412

Query: 225 LNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGS-VVQIAAGPS 279
            +   +L +   G V++ G    G+LGHGDT+    PK I+    ++ G  VV IA G +
Sbjct: 413 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGST 472

Query: 280 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS--AGDEHVVA 337
           Y  A+T  G +Y++G G+   LGHG   DE  P  +     KG+ V+ V+  +GD   +A
Sbjct: 473 YSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGL--KGLKVIDVACGSGDAQTLA 530

Query: 338 LDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVY 397
           +  +G V++WG G  G LG G       P+ +  L+    ++V    + +  L   G VY
Sbjct: 531 VTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVIKVRCGSQFSIALTKDGQVY 590

Query: 398 GFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDN 457
            +G      LG    G  + V  P++L+ L+   V  ++ G  H +V+T+   +  +G N
Sbjct: 591 SWGKGDNQRLG---HGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLVLTEDSEVHSWGSN 647

Query: 458 ERAQ 461
           ++ Q
Sbjct: 648 DQCQ 651



 Score =  105 bits (261), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 63/203 (31%), Positives = 109/203 (53%), Gaps = 9/203 (4%)

Query: 270 SVVQIAAGPS--YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTF--RRKGIHV 325
           ++V+IAA     + LA+   G VYS+G G    LGHG+     +P+ I  F  ++ G HV
Sbjct: 405 NIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHV 464

Query: 326 VRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVC--AR 383
           V ++ G  +  A+ + G +YTWG+G  G LGHG   D+ +P  ++ LK    + V   + 
Sbjct: 465 VHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSG 524

Query: 384 KRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV 443
             +T  + + G V+ +G   +G LG   RG SD    P++++ L+   V ++  G   ++
Sbjct: 525 DAQTLAVTENGQVWSWGDGDYGKLG---RGGSDGCKTPKLIEKLQDLDVIKVRCGSQFSI 581

Query: 444 VVTDRGRLFGFGDNERAQLGHDT 466
            +T  G+++ +G  +  +LGH T
Sbjct: 582 ALTKDGQVYSWGKGDNQRLGHGT 604



 Score =  101 bits (252), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 84/265 (31%), Positives = 126/265 (47%), Gaps = 12/265 (4%)

Query: 96   FLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFT 155
             L+S++H    ++  A N   + G++   L S   V+S G +  G LGHG   + C    
Sbjct: 3942 LLESIQHV--FIKKVAVN---SGGKHCLALSSEGEVYSWGEAEDGKLGHG-NRSPCDRPR 3995

Query: 156  RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 215
             I       VV V+A   H+A V  +G ++T G       GH D+   + +P+LVEAL+G
Sbjct: 3996 VIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQL-KPKLVEALQG 4054

Query: 216  VPCKQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
                 +   +G   T  LT    V + G   +G+LG G +     P  I  L  +G VV+
Sbjct: 4055 HRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLG-VVK 4113

Query: 274  IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
            +  G  + +A+T +G VY++G G    LGHG      +PR +Q    +G  V+ ++ G  
Sbjct: 4114 VECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGL--QGKKVIAIATGSL 4171

Query: 334  HVVALDSSGYVYTWGKGYCGALGHG 358
            H V     G VYTWG    G LG G
Sbjct: 4172 HCVCCTEDGEVYTWGDNDEGQLGDG 4196



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 77/247 (31%), Positives = 125/247 (50%), Gaps = 12/247 (4%)

Query: 235  GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
            G ++  G N  GQLG   G  +  PTP +++A L  V    Q+  G   + AVT +G +Y
Sbjct: 3864 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPV----QLIGGEQTLFAVTADGKLY 3919

Query: 292  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 351
            + G G+   LG G       P  +++ +   I  V V++G +H +AL S G VY+WG+  
Sbjct: 3920 ATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAE 3979

Query: 352  CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 411
             G LGHG+      P  + SL+    V V A    +  +   G +Y +G   +G LG  D
Sbjct: 3980 DGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD 4039

Query: 412  RGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG 469
               S+  L+P+++++L+ H V  I+  +G   T+ +TD   ++ +GD +  +LG     G
Sbjct: 4040 ---SEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDG 4096

Query: 470  CLEPTEI 476
            C  P +I
Sbjct: 4097 CKVPMKI 4103



 Score = 98.6 bits (244), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 81/249 (32%), Positives = 116/249 (46%), Gaps = 21/249 (8%)

Query: 119  GRYHTLLISNSSVFSCGSSLCGVLGH-------GPETTQCVSFTRINFPSAAHVVQVSAS 171
            GR+ T L  +  VFS G    G LGH        P   Q +   RI          ++  
Sbjct: 2967 GRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIQALKTKRIR--------DIAYG 3018

Query: 172  ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN--FTG 229
             +H+A +  SG+++T G       GH D N    +P++V+ L G    QV  G     T 
Sbjct: 3019 SSHSAPLTSSGELYTWGLGEYGRLGHGD-NTTQLKPKMVKVLLGHRVIQVACGSRDAQTL 3077

Query: 230  FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 289
             LT  G V + G    G+LG G +     P++I  L   G V QI  G  + LA+T +GV
Sbjct: 3078 ALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG-VCQIECGAQFSLALTKSGV 3136

Query: 290  VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 349
            V+++G G  F LGHG      +P+ ++  R  G  +V V+ G  H +A+  SG VY WG 
Sbjct: 3137 VWTWGKGDYFRLGHGSDVHVRKPQVVEGLR--GKKIVHVAVGALHCLAVTDSGQVYAWGD 3194

Query: 350  GYCGALGHG 358
               G  G+G
Sbjct: 3195 NDHGQQGNG 3203



 Score = 95.1 bits (235), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 78/275 (28%), Positives = 127/275 (46%), Gaps = 23/275 (8%)

Query: 103 SSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHG-------PETTQCVSFT 155
           S +IV+ +A     + G ++  L +   V+S G    G LGHG       P+     S  
Sbjct: 403 SRNIVKIAAH----SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGK 458

Query: 156 RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 215
           +    +  HVV ++    ++A +   G+++T G  +    GH  +      P LV  LKG
Sbjct: 459 Q----AGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAI-PMLVAGLKG 513

Query: 216 VPCKQVTAGLNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
           +    V  G      L +   G V + G   +G+LG G +    TPK I  L+++  V++
Sbjct: 514 LKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL-DVIK 572

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           +  G  + +A+T +G VYS+G G N  LGHG +     P+ ++    +G  V+ V+AG  
Sbjct: 573 VRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGL--QGKKVIDVAAGST 630

Query: 334 HVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEP 368
           H + L     V++WG        H D +  T PEP
Sbjct: 631 HCLVLTEDSEVHSWGSN--DQCQHFDTLGVTKPEP 663



 Score = 75.9 bits (185), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 57/219 (26%), Positives = 101/219 (46%), Gaps = 21/219 (9%)

Query: 271 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 330
           V+Q+A      L ++ NG VY+    S          D L P+ +Q    + I  +   +
Sbjct: 364 VMQVACAEKRFLILSRNGRVYTQAYNS----------DMLAPQLVQGLASRNIVKIAAHS 413

Query: 331 GDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLA----VQVCARKRK 386
              H +AL ++G VY+WG G  G LGHGD +    P+ +S+     A    V +      
Sbjct: 414 DGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTY 473

Query: 387 TFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVV 444
           +  +   G +Y +G   +G LG    G S+    P ++  L+   V  ++  +G   T+ 
Sbjct: 474 SAAITAEGELYTWGRGNYGRLG---HGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLA 530

Query: 445 VTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQEMEE 483
           VT+ G+++ +GD +  +LG     GC  P    I+++++
Sbjct: 531 VTENGQVWSWGDGDYGKLGRGGSDGCKTPK--LIEKLQD 567



 Score = 66.6 bits (161), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 66/225 (29%), Positives = 100/225 (44%), Gaps = 8/225 (3%)

Query: 116  ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
            I  G  H+  L S+  +++ G    G LGHG  TTQ +    +       V+QV+     
Sbjct: 3015 IAYGSSHSAPLTSSGELYTWGLGEYGRLGHGDNTTQ-LKPKMVKVLLGHRVIQVACGSRD 3073

Query: 175  AA--FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            A    +   G VF+ GD      G R  +     P+ +E L G    Q+  G  F+  LT
Sbjct: 3074 AQTLALTDEGLVFSWGDGDFGKLG-RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALT 3132

Query: 233  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
              G V T G   + +LGHG  +    P+ +  L     +V +A G  + LAVT +G VY+
Sbjct: 3133 KSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRG-KKIVHVAVGALHCLAVTDSGQVYA 3191

Query: 293  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
            +G   +   G+G      +P  +Q    +G  + RV+ G  H VA
Sbjct: 3192 WGDNDHGQQGNGTTTVNRKPTLVQGL--EGQKITRVACGSSHSVA 3234



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 50/167 (29%), Positives = 76/167 (45%), Gaps = 4/167 (2%)

Query: 118  TGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
            +G   TL L  + +V+S G    G LG G  +  C    +I+  +   VV+V      + 
Sbjct: 4064 SGDAQTLCLTDDDTVWSWGDGDYGKLGRG-GSDGCKVPMKIDSLTGLGVVKVECGSQFSV 4122

Query: 177  FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
             + +SG V+T G       GH   +  + RPR V+ L+G     +  G       T  G 
Sbjct: 4123 ALTKSGAVYTWGKGDYHRLGHGSDDH-VRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGE 4181

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
            V+T G N  GQLG G T     P+ +A L+    V ++A G ++ LA
Sbjct: 4182 VYTWGDNDEGQLGDGTTNAIQRPRLVAALQG-KKVNRVACGSAHTLA 4227



 Score = 52.4 bits (124), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 51/168 (30%), Positives = 74/168 (44%), Gaps = 6/168 (3%)

Query: 118 TGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
           +G   TL ++ N  V+S G    G LG G  +  C +   I       V++V      + 
Sbjct: 523 SGDAQTLAVTENGQVWSWGDGDYGKLGRG-GSDGCKTPKLIEKLQDLDVIKVRCGSQFSI 581

Query: 177 FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
            + + GQV++ G   +   GH  T   +  P+L+E L+G     V AG      LT    
Sbjct: 582 ALTKDGQVYSWGKGDNQRLGH-GTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLVLTEDSE 640

Query: 237 VHTCGSNTHGQLGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSYMLA 283
           VH+ GSN   Q  H DTL    P+  A P  +   +V IA GP+   A
Sbjct: 641 VHSWGSNDQCQ--HFDTLGVTKPEPTAFPGLDSKHIVGIACGPAQSFA 686



 Score = 52.0 bits (123), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 36/147 (24%), Positives = 71/147 (48%), Gaps = 5/147 (3%)

Query: 332  DEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 391
            D+  ++   SG +Y WG  + G LG  +     +P P  +L +   VQ+   ++  F + 
Sbjct: 3854 DDWTLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVT 3913

Query: 392  DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRG 449
              G +Y     G+G+ G    G ++ V  P +L+S++   + +++  +G  H + ++  G
Sbjct: 3914 ADGKLYA---TGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 3970

Query: 450  RLFGFGDNERAQLGHDTLRGCLEPTEI 476
             ++ +G+ E  +LGH     C  P  I
Sbjct: 3971 EVYSWGEAEDGKLGHGNRSPCDRPRVI 3997



 Score = 44.3 bits (103), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 41/139 (29%), Positives = 65/139 (46%), Gaps = 12/139 (8%)

Query: 344  VYTWGKGYCGALG--HGDEID-KTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 400
            V+ WG      LG   G +I   +  E LS+L     VQV    +  F +   G VY  G
Sbjct: 2872 VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALN---VVQVAGGSKSLFAVTVEGKVYSCG 2928

Query: 401  WMGFGSLGFPDRGVSD-KVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDN 457
                G LG    G+S   V  PR + +L ++ V +++  +G  H   +T  G++F +G+ 
Sbjct: 2929 EATNGRLGL---GMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEG 2985

Query: 458  ERAQLGHDTLRGCLEPTEI 476
            +  +LGH +   C +P  I
Sbjct: 2986 DDGKLGHFSRMNCDKPRLI 3004


>gi|383422561|gb|AFH34494.1| putative E3 ubiquitin-protein ligase HERC1 [Macaca mulatta]
          Length = 4853

 Score =  128 bits (322), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 103/339 (30%), Positives = 166/339 (48%), Gaps = 17/339 (5%)

Query: 115  QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQV---SA 170
            Q+  G+  T +I +N +V +CG    G LG G      V  T I+      V Q+     
Sbjct: 4023 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHV-LTVISALQGFVVTQLVTSCG 4081

Query: 171  SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
            S+ H+  + +SG+VF+ GD      GH +++R   RPR +EAL+G    Q++ G   +  
Sbjct: 4082 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQMSCGFKHSAV 4140

Query: 231  LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSVVQIAAGPSYMLAVTGNG 288
            +T  G + T G+  +G+LG G+T ++  P+ +  LE  ++G   Q+A G ++ LAV+ +G
Sbjct: 4141 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIG---QVACGLNHTLAVSADG 4197

Query: 289  -VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 347
             +V++FG G    LG G    +  P+ I      GI + +V+ G +  VAL   G+VYT+
Sbjct: 4198 SMVWAFGDGDYGKLGLGNSTAKSSPQKIDVL--CGIGIKKVACGTQFSVALTKDGHVYTF 4255

Query: 348  GKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSL 407
            G+     L  G   +   P+ +  L   +   V      T  L   G VY +G    G L
Sbjct: 4256 GQDRLIGLPEGRARNHNRPQQIPVLAGMIIEDVAVGAEHTLALASNGDVYAWGSNSEGQL 4315

Query: 408  GFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT 446
            G    G ++ V  P ++  L+  +V QIS G  H+   T
Sbjct: 4316 GL---GHTNHVREPTLVTGLQGKNVRQISAGRCHSAAWT 4351



 Score =  109 bits (273), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 90/315 (28%), Positives = 144/315 (45%), Gaps = 25/315 (7%)

Query: 160 PSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTN------RPIFRPRLVEAL 213
           PS +    + A +     +   G V  CG  S    G  D+N      +  F P    ++
Sbjct: 400 PSFSDAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPH--RSI 457

Query: 214 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
           K V   + + G   T   T  G V + G   +G+LGHG++  +  PK I    +   VV 
Sbjct: 458 KKVSSSKGSDG--HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVC 515

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           ++AG  +  AVT +G +Y++G G    LGHG+ +     R I T  +   +V  VS G  
Sbjct: 516 VSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNS----RNIPTLVKDISNVGEVSCGSS 571

Query: 334 HVVALDSSGY-VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVD 392
           H +AL   G  V+++G G  G LGHGD      P+ + +L+     +VCA  + +  L  
Sbjct: 572 HTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTS 631

Query: 393 TGSVYGFG---WMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRG 449
           TG VY +G    +G GS            LRP++++ L A  +  +S G  H + ++   
Sbjct: 632 TGQVYAWGCGACLGCGS-------SEATALRPKLIEELAATRIVDVSIGDSHCLALSHDN 684

Query: 450 RLFGFGDNERAQLGH 464
            ++ +G+N   Q G 
Sbjct: 685 EVYAWGNNSMGQCGQ 699



 Score = 99.0 bits (245), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 91/266 (34%), Positives = 128/266 (48%), Gaps = 14/266 (5%)

Query: 122 HTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
           HTL   +   VFS G    G LGHG  +TQ              VV VSA   H+A V +
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528

Query: 181 SGQVFTCGDNSSFCCGHRDTN-RPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH-VH 238
            G+++T G+      GH D+N R I  P LV+ +  V   +V+ G + T  L+  G  V 
Sbjct: 529 DGELYTWGEGDFGRLGHGDSNSRNI--PTLVKDISNV--GEVSCGSSHTIALSKDGRTVW 584

Query: 239 TCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
           + G   +G+LGHGDT     PK I  L+ +  + ++ AG    LA+T  G VY++G G+ 
Sbjct: 585 SFGGGDNGKLGHGDTNRVYKPKVIEALQGM-FIRKVCAGSQSSLALTSTGQVYAWGCGA- 642

Query: 299 FCLGHG-EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 357
            CLG G  +   L+P+ I+        +V VS GD H +AL     VY WG    G  G 
Sbjct: 643 -CLGCGSSEATALRPKLIEEL--AATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQ 699

Query: 358 GDEIDK-TLPEPLSSLKSHLAVQVCA 382
           G+     T P+ +S L      Q+ A
Sbjct: 700 GNSTGPITKPKKVSGLDGIAIQQISA 725



 Score = 98.2 bits (243), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 87/320 (27%), Positives = 148/320 (46%), Gaps = 13/320 (4%)

Query: 160  PSAAHVVQVSASENHAAFVLQS-GQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPC 218
            PS +   QV   +N   FV+Q+ G V  CG+ S    G  +++  +    ++ AL+G   
Sbjct: 4016 PSFSQAQQVICGQN-CTFVIQANGTVLACGEGSYGRLGQGNSDD-LHVLTVISALQGFVV 4073

Query: 219  KQVTAGLNFTGF---LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA 275
             Q+       G    LT  G V + G   +G+LGHG++  +  P+ I  L+    VVQ++
Sbjct: 4074 TQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQG-EEVVQMS 4132

Query: 276  AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHV 335
             G  +   VT +G +++FG+G    LG G   ++  P  +     +G  + +V+ G  H 
Sbjct: 4133 CGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTAL--EGYQIGQVACGLNHT 4190

Query: 336  VALDSSG-YVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 394
            +A+ + G  V+ +G G  G LG G+   K+ P+ +  L      +V    + +  L   G
Sbjct: 4191 LAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDG 4250

Query: 395  SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 454
             VY FG      +G P+ G +    RP+ +  L    +  ++ G  HT+ +   G ++ +
Sbjct: 4251 HVYTFGQDRL--IGLPE-GRARNHNRPQQIPVLAGMIIEDVAVGAEHTLALASNGDVYAW 4307

Query: 455  GDNERAQLGHDTLRGCLEPT 474
            G N   QLG        EPT
Sbjct: 4308 GSNSEGQLGLGHTNHVREPT 4327



 Score = 84.7 bits (208), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 68/230 (29%), Positives = 108/230 (46%), Gaps = 11/230 (4%)

Query: 237  VHTCGSNTHGQLGH-GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 295
            V+  G+  HGQL   G  +  P   + AP        Q+  G +    +  NG V + G 
Sbjct: 3991 VYLWGAGRHGQLAEAGRNVMVP---AAAP--SFSQAQQVICGQNCTFVIQANGTVLACGE 4045

Query: 296  GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG-DEHVVALDSSGYVYTWGKGYCGA 354
            GS   LG G   D      I   +   +  +  S G D H +AL  SG V++WG G  G 
Sbjct: 4046 GSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGK 4105

Query: 355  LGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGV 414
            LGHG+   +  P  + +L+    VQ+    + + V+   G ++ FG   +G LG  +   
Sbjct: 4106 LGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN--T 4163

Query: 415  SDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRL-FGFGDNERAQLG 463
            S+K L P  + +L  + + Q++ GL HT+ V+  G + + FGD +  +LG
Sbjct: 4164 SNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLG 4212



 Score = 59.7 bits (143), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 49/180 (27%), Positives = 82/180 (45%), Gaps = 13/180 (7%)

Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 349
           VY +GS S+  L  G Q   LQP+   +F         + AG      + + G V   GK
Sbjct: 374 VYVWGSNSSHQLVEGTQEKILQPKLAPSFS----DAQTIEAGQYCTFVISTDGSVRACGK 429

Query: 350 GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKR----KTFVLVDTGSVYGFGWMGFG 405
           G  G LG GD  +++  + L + + H +++  +  +     T      G V+ +G   +G
Sbjct: 430 GSYGRLGLGDSNNQSTLKKL-TFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYG 488

Query: 406 SLGFPDRGVSDKVLRPRILD-SLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 464
            LG    G S     P+++   L+   V  +S G  H+  VT+ G L+ +G+ +  +LGH
Sbjct: 489 KLG---HGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGH 545



 Score = 49.3 bits (116), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 29/100 (29%), Positives = 48/100 (48%), Gaps = 2/100 (2%)

Query: 125 LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQV 184
           L S   V++ G   C  LG G      +    I   +A  +V VS  ++H   +    +V
Sbjct: 629 LTSTGQVYAWGCGAC--LGCGSSEATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEV 686

Query: 185 FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           +  G+NS   CG  ++  PI +P+ V  L G+  +Q++AG
Sbjct: 687 YAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAG 726



 Score = 49.3 bits (116), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 41/143 (28%), Positives = 67/143 (46%), Gaps = 9/143 (6%)

Query: 344  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 403
            VY WG G  G L    E  + +  P ++     A QV   +  TFV+   G+V   G   
Sbjct: 3991 VYLWGAGRHGQLA---EAGRNVMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGS 4047

Query: 404  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLY---HTVVVTDRGRLFGFGDNERA 460
            +G LG   +G SD +    ++ +L+   V+Q+ T      H++ +T+ G +F +GD +  
Sbjct: 4048 YGRLG---QGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYG 4104

Query: 461  QLGHDTLRGCLEPTEIFIQEMEE 483
            +LGH        P +I   + EE
Sbjct: 4105 KLGHGNSDRQRRPRQIEALQGEE 4127


>gi|297686826|ref|XP_002820939.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
           [Pongo abelii]
          Length = 1057

 Score =  128 bits (322), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 91/276 (32%), Positives = 142/276 (51%), Gaps = 10/276 (3%)

Query: 204 IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 263
           +  PR  +       + V  GL  T F+   G V+TCG N  GQLGH  +  R  P+ + 
Sbjct: 22  VLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKS--RKKPEQVV 79

Query: 264 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH-GEQHDELQPRAIQTFRRKG 322
            L+   ++V ++ G ++ LA+   G VY++G  S+  LG  G +     PR I++     
Sbjct: 80  ALD-AQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSL--SD 136

Query: 323 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK-TLPEPLSSLKSHLAVQVC 381
           I +V+V+ G  H +AL  +  V+ WG+   G LG G +  K T P+ L SL     +QV 
Sbjct: 137 IQIVQVACGYCHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVA 196

Query: 382 ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYH 441
           A    +FVL  +G+++G+G   FG LG  D   +D+ + P +L SLR+  +  I  G  H
Sbjct: 197 AGGAHSFVLTLSGAIFGWGRNKFGQLGLNDE--NDRYV-PNLLKSLRSQKIVYICCGEDH 253

Query: 442 TVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF 477
           T  +T  G +F FG     QLGH++    + P ++F
Sbjct: 254 TAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVF 289



 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 104/333 (31%), Positives = 153/333 (45%), Gaps = 13/333 (3%)

Query: 135 GSSLCGVLGHGPETTQCVSFTRI-NFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSF 193
           G++  G LG G    + V   R  +F     V  V     H  FVL  G V+TCG N   
Sbjct: 5   GNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLG 64

Query: 194 CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGH-GD 252
             GH  + +   +P  V AL       V+ G   T  L  +G V+  G ++ GQLG  G 
Sbjct: 65  QLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGS 121

Query: 253 TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ-HDELQ 311
                 P++I  L ++  +VQ+A G  + LA++    V+ +G      LG G     +  
Sbjct: 122 EECIRVPRNIKSLSDI-QIVQVACGYCHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTS 180

Query: 312 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSS 371
           P+ +++    GI  ++V+AG  H   L  SG ++ WG+   G LG  DE D+ +P  L S
Sbjct: 181 PQLLKSLL--GIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKS 238

Query: 372 LKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHH 431
           L+S   V +C  +  T  L   G V+ FG  G+G LG      +   + PR +  L    
Sbjct: 239 LRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG---HNSTSHEINPRKVFELMGSI 295

Query: 432 VSQISTGLYHT-VVVTDRGRLFGFGDNERAQLG 463
           V+QI+ G  HT   V   GR++ FG     QLG
Sbjct: 296 VTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  108 bits (270), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 79/291 (27%), Positives = 138/291 (47%), Gaps = 8/291 (2%)

Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 179
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V VS  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVSCGEAHTLALN 100

Query: 180 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 239
             GQV+  G +S    G   +   I  PR +++L  +   QV  G   +  L+    V  
Sbjct: 101 DKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYCHSLALSKASEVFC 160

Query: 240 CGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
            G N +GQLG G D   + +P+ +  L  +   +Q+AAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKYGQLGLGTDCKKQTSPQLLKSLLGI-PFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 299 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 358
             LG  +++D   P  +++ R + I  V +  G++H  AL   G V+T+G G  G LGH 
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRSQKI--VYICCGEDHTAALTKEGGVFTFGAGGYGQLGHN 277

Query: 359 DEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLG 408
               +  P  +  L   +  Q+ C R+  +  +  +G +Y FG  G G LG
Sbjct: 278 STSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 84/274 (30%), Positives = 132/274 (48%), Gaps = 10/274 (3%)

Query: 98  QSVEHSSDIVETSAGNM-QITTGRYHTLLISNS-SVFSCGSSLCGVLGH-GPETTQCVSF 154
           +S +    +V   A N+  ++ G  HTL +++   V++ G    G LG  G E  +C+  
Sbjct: 70  KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGSE--ECIRV 127

Query: 155 TR-INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEAL 213
            R I   S   +VQV+    H+  + ++ +VF  G N     G     +    P+L+++L
Sbjct: 128 PRNIKSLSDIQIVQVACGYCHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSL 187

Query: 214 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
            G+P  QV AG   +  LT+ G +   G N  GQLG  D  DR  P  +  L     +V 
Sbjct: 188 LGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRS-QKIVY 246

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           I  G  +  A+T  G V++FG+G    LGH     E+ PR +  F   G  V +++ G +
Sbjct: 247 ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQ 304

Query: 334 HVVA-LDSSGYVYTWGKGYCGALGHGDEIDKTLP 366
           H  A + SSG +Y++G G  G LG G   ++  P
Sbjct: 305 HTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338



 Score = 75.9 bits (185), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 65/206 (31%), Positives = 98/206 (47%), Gaps = 6/206 (2%)

Query: 114 MQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +Q+  G  H+L +S +S VF  G +  G LG G +  +  S   +        +QV+A  
Sbjct: 140 VQVACGYCHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGG 199

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            H+  +  SG +F  G N     G  D N   + P L+++L+      +  G + T  LT
Sbjct: 200 AHSFVLTLSGAIFGWGRNKFGQLGLNDENDR-YVPNLLKSLRSQKIVYICCGEDHTAALT 258

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVV 290
             G V T G+  +GQLGH  T     P+ +   E +GS+V QIA G  +  A V  +G +
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRI 316

Query: 291 YSFGSGSNFCLGHGEQHDELQPRAIQ 316
           YSFG G N  LG G   +   P  ++
Sbjct: 317 YSFGLGGNGQLGTGSTSNRKSPFTVK 342


>gi|4079811|gb|AAD08658.1| Herc2 [Mus musculus]
          Length = 4836

 Score =  128 bits (322), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 95/328 (28%), Positives = 158/328 (48%), Gaps = 16/328 (4%)

Query: 161  SAAHVVQVSASENHAAFVLQSGQVFTCGD--NSSFCCGHRDTNRPIFRPRLVEALKGVPC 218
            SA +VVQV+        V   G+V++CG+  N     G      PI  PR + AL     
Sbjct: 2991 SALNVVQVAGGSKSLFAVTVEGKVYSCGEATNGRLGLGMSSGTVPI--PRQITALSSYVV 3048

Query: 219  KQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA 276
            K+V   +G      LT+ G V + G    G+LGH   ++   P+ I  L+    +  IA 
Sbjct: 3049 KKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIQALK-TKRIRDIAY 3107

Query: 277  GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEH 334
            G S+   +T +G +Y++G G    LGHG+   +L+P+ ++     G  V++V+ G  D  
Sbjct: 3108 GSSHSAPLTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLL--GHRVIQVACGSRDAQ 3165

Query: 335  VVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 394
             +AL   G V++WG G  G LG G      +P+ +  L      Q+    + +  L  +G
Sbjct: 3166 TLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSG 3225

Query: 395  SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 454
             V+ +G   +  LG    G    V +P++++ LR   +  ++ G  H + VTD G+++ +
Sbjct: 3226 VVWTWGKGDYFRLG---HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAW 3282

Query: 455  GDNERAQLGHDTLRGCLEPTEIFIQEME 482
            GDN+  Q G+ T     +PT   +Q +E
Sbjct: 3283 GDNDHGQQGNGTTTVNRKPT--LVQGLE 3308



 Score =  125 bits (313), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 93/286 (32%), Positives = 140/286 (48%), Gaps = 10/286 (3%)

Query: 183  QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 242
            +VF  G N     G    ++ I  P   E L  +   QV  G      +T+ G V++CG 
Sbjct: 2961 KVFVWGLNDKDQLGGLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYSCGE 3019

Query: 243  NTHGQLGHG-DTLDRPTPKSIAPLEE-VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 300
             T+G+LG G  +   P P+ I  L   V   V + +G  +  A+T +G V+S+G G +  
Sbjct: 3020 ATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGK 3079

Query: 301  LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 360
            LGH  + +  +PR IQ  + K I    ++ G  H   L SSG +YTWG G  G LGHGD 
Sbjct: 3080 LGHFSRMNCDKPRLIQALKTKRIR--DIAYGSSHSAPLTSSGELYTWGLGEYGRLGHGDN 3137

Query: 361  IDKTLPEPLSSLKSHLAVQVC--ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKV 418
              +  P+ +  L  H  +QV   +R  +T  L D G V+ +G   FG LG   RG S+  
Sbjct: 3138 TTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLG---RGGSEGC 3194

Query: 419  LRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 464
              P+ ++ L    V QI  G   ++ +T  G ++ +G  +  +LGH
Sbjct: 3195 NIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGH 3240



 Score =  121 bits (304), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 85/280 (30%), Positives = 139/280 (49%), Gaps = 9/280 (3%)

Query: 166  VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 225
            V V++   H   +   G+V++ G+      GH + + P  RPR++E+L+G+    V AG 
Sbjct: 4044 VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRS-PCDRPRVIESLRGIEVVDVAAGG 4102

Query: 226  NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA--AGPSYMLA 283
              +  +T  G ++T G   +G+LGH D+ D+  PK +  L+    V+ IA  +G +  L 
Sbjct: 4103 AHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQG-HRVIDIACGSGDAQTLC 4161

Query: 284  VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 343
            +T +  V+S+G G    LG G       P  I +    G+ VV+V  G +  VAL  SG 
Sbjct: 4162 LTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL--TGLGVVKVECGSQFSVALTKSGA 4219

Query: 344  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 403
            VYTWGKG    LGHG +     P  +  L+    + +           + G VY +G   
Sbjct: 4220 VYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDND 4279

Query: 404  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV 443
             G LG    G ++ + RPR++ +L+   V++++ G  HT+
Sbjct: 4280 EGQLG---DGTTNAIQRPRLVAALQGKKVNRVACGSAHTL 4316



 Score =  121 bits (303), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 82/269 (30%), Positives = 131/269 (48%), Gaps = 6/269 (2%)

Query: 207  PRLVEALKGVPCKQV--TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP 264
            P L+E+++ V  K+V   +G      L+  G V++ G    G+LGHG+      P+ I  
Sbjct: 4030 PTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIES 4089

Query: 265  LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH 324
            L  +  VV +AAG ++   VT  G +Y++G G    LGH +  D+L+P+ ++  +   + 
Sbjct: 4090 LRGI-EVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVI 4148

Query: 325  VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARK 384
             +   +GD   + L     V++WG G  G LG G      +P  + SL     V+V    
Sbjct: 4149 DIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGS 4208

Query: 385  RKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV 444
            + +  L  +G+VY +G   +  LG    G  D V RPR +  L+   V  I+TG  H V 
Sbjct: 4209 QFSVALTKSGAVYTWGKGDYHRLG---HGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 4265

Query: 445  VTDRGRLFGFGDNERAQLGHDTLRGCLEP 473
             T+ G ++ +GDN+  QLG  T      P
Sbjct: 4266 CTEDGEVYTWGDNDEGQLGDGTTNAIQRP 4294



 Score =  118 bits (296), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 87/304 (28%), Positives = 148/304 (48%), Gaps = 23/304 (7%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V+QV+ +E     + ++G+V+T   NS            +  P+LV+ L      ++ A 
Sbjct: 454 VMQVACAEKRFLILSRNGRVYTQAYNSD-----------MLAPQLVQGLASRNIVKIAAH 502

Query: 225 LNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGS-VVQIAAGPS 279
            +   +L +   G V++ G    G+LGHGDT+    PK I+    ++ G  VV IA G +
Sbjct: 503 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGST 562

Query: 280 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS--AGDEHVVA 337
           Y  A+T  G +Y++G G+   LGHG   DE  P  +     KG+ V+ V+  +GD   +A
Sbjct: 563 YSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGL--KGLKVIDVACGSGDAQTLA 620

Query: 338 LDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVY 397
           +  +G V++WG G  G LG G       P+ +  L+    ++V    + +  L   G VY
Sbjct: 621 VTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVIKVRCGSQFSIALTKDGQVY 680

Query: 398 GFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDN 457
            +G      LG    G  + V  P++L+ L+   V  ++ G  H +V+T+   +  +G N
Sbjct: 681 SWGKGDNQRLG---HGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLVLTEDSEVHSWGSN 737

Query: 458 ERAQ 461
           ++ Q
Sbjct: 738 DQCQ 741



 Score =  105 bits (261), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 63/203 (31%), Positives = 109/203 (53%), Gaps = 9/203 (4%)

Query: 270 SVVQIAAGPS--YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTF--RRKGIHV 325
           ++V+IAA     + LA+   G VYS+G G    LGHG+     +P+ I  F  ++ G HV
Sbjct: 495 NIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHV 554

Query: 326 VRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVC--AR 383
           V ++ G  +  A+ + G +YTWG+G  G LGHG   D+ +P  ++ LK    + V   + 
Sbjct: 555 VHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSG 614

Query: 384 KRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV 443
             +T  + + G V+ +G   +G LG   RG SD    P++++ L+   V ++  G   ++
Sbjct: 615 DAQTLAVTENGQVWSWGDGDYGKLG---RGGSDGCKTPKLIEKLQDLDVIKVRCGSQFSI 671

Query: 444 VVTDRGRLFGFGDNERAQLGHDT 466
            +T  G+++ +G  +  +LGH T
Sbjct: 672 ALTKDGQVYSWGKGDNQRLGHGT 694



 Score =  101 bits (252), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 84/265 (31%), Positives = 126/265 (47%), Gaps = 12/265 (4%)

Query: 96   FLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFT 155
             L+S++H    ++  A N   + G++   L S   V+S G +  G LGHG   + C    
Sbjct: 4032 LLESIQHV--FIKKVAVN---SGGKHCLALSSEGEVYSWGEAEDGKLGHG-NRSPCDRPR 4085

Query: 156  RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 215
             I       VV V+A   H+A V  +G ++T G       GH D+   + +P+LVEAL+G
Sbjct: 4086 VIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQL-KPKLVEALQG 4144

Query: 216  VPCKQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
                 +   +G   T  LT    V + G   +G+LG G +     P  I  L  +G VV+
Sbjct: 4145 HRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLG-VVK 4203

Query: 274  IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
            +  G  + +A+T +G VY++G G    LGHG      +PR +Q    +G  V+ ++ G  
Sbjct: 4204 VECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGL--QGKKVIAIATGSL 4261

Query: 334  HVVALDSSGYVYTWGKGYCGALGHG 358
            H V     G VYTWG    G LG G
Sbjct: 4262 HCVCCTEDGEVYTWGDNDEGQLGDG 4286



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 77/247 (31%), Positives = 125/247 (50%), Gaps = 12/247 (4%)

Query: 235  GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
            G ++  G N  GQLG   G  +  PTP +++A L  V    Q+  G   + AVT +G +Y
Sbjct: 3954 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPV----QLIGGEQTLFAVTADGKLY 4009

Query: 292  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 351
            + G G+   LG G       P  +++ +   I  V V++G +H +AL S G VY+WG+  
Sbjct: 4010 ATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAE 4069

Query: 352  CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 411
             G LGHG+      P  + SL+    V V A    +  +   G +Y +G   +G LG  D
Sbjct: 4070 DGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD 4129

Query: 412  RGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG 469
               S+  L+P+++++L+ H V  I+  +G   T+ +TD   ++ +GD +  +LG     G
Sbjct: 4130 ---SEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDG 4186

Query: 470  CLEPTEI 476
            C  P +I
Sbjct: 4187 CKVPMKI 4193



 Score = 99.0 bits (245), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 81/249 (32%), Positives = 116/249 (46%), Gaps = 21/249 (8%)

Query: 119  GRYHTLLISNSSVFSCGSSLCGVLGH-------GPETTQCVSFTRINFPSAAHVVQVSAS 171
            GR+ T L  +  VFS G    G LGH        P   Q +   RI          ++  
Sbjct: 3057 GRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIQALKTKRIR--------DIAYG 3108

Query: 172  ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN--FTG 229
             +H+A +  SG+++T G       GH D N    +P++V+ L G    QV  G     T 
Sbjct: 3109 SSHSAPLTSSGELYTWGLGEYGRLGHGD-NTTQLKPKMVKVLLGHRVIQVACGSRDAQTL 3167

Query: 230  FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 289
             LT  G V + G    G+LG G +     P++I  L   G V QI  G  + LA+T +GV
Sbjct: 3168 ALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG-VCQIECGAQFSLALTKSGV 3226

Query: 290  VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 349
            V+++G G  F LGHG      +P+ ++  R  G  +V V+ G  H +A+  SG VY WG 
Sbjct: 3227 VWTWGKGDYFRLGHGSDVHVRKPQVVEGLR--GKKIVHVAVGALHCLAVTDSGQVYAWGD 3284

Query: 350  GYCGALGHG 358
               G  G+G
Sbjct: 3285 NDHGQQGNG 3293



 Score = 94.7 bits (234), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 78/275 (28%), Positives = 127/275 (46%), Gaps = 23/275 (8%)

Query: 103 SSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHG-------PETTQCVSFT 155
           S +IV+ +A     + G ++  L +   V+S G    G LGHG       P+     S  
Sbjct: 493 SRNIVKIAAH----SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGK 548

Query: 156 RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 215
           +    +  HVV ++    ++A +   G+++T G  +    GH  +      P LV  LKG
Sbjct: 549 Q----AGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAI-PMLVAGLKG 603

Query: 216 VPCKQVTAGLNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
           +    V  G      L +   G V + G   +G+LG G +    TPK I  L+++  V++
Sbjct: 604 LKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL-DVIK 662

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           +  G  + +A+T +G VYS+G G N  LGHG +     P+ ++    +G  V+ V+AG  
Sbjct: 663 VRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGL--QGKKVIDVAAGST 720

Query: 334 HVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEP 368
           H + L     V++WG        H D +  T PEP
Sbjct: 721 HCLVLTEDSEVHSWGSN--DQCQHFDTLGVTKPEP 753



 Score = 75.9 bits (185), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 57/219 (26%), Positives = 101/219 (46%), Gaps = 21/219 (9%)

Query: 271 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 330
           V+Q+A      L ++ NG VY+    S          D L P+ +Q    + I  +   +
Sbjct: 454 VMQVACAEKRFLILSRNGRVYTQAYNS----------DMLAPQLVQGLASRNIVKIAAHS 503

Query: 331 GDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLA----VQVCARKRK 386
              H +AL ++G VY+WG G  G LGHGD +    P+ +S+     A    V +      
Sbjct: 504 DGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTY 563

Query: 387 TFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVV 444
           +  +   G +Y +G   +G LG    G S+    P ++  L+   V  ++  +G   T+ 
Sbjct: 564 SAAITAEGELYTWGRGNYGRLG---HGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLA 620

Query: 445 VTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQEMEE 483
           VT+ G+++ +GD +  +LG     GC  P    I+++++
Sbjct: 621 VTENGQVWSWGDGDYGKLGRGGSDGCKTPK--LIEKLQD 657



 Score = 66.6 bits (161), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 66/225 (29%), Positives = 100/225 (44%), Gaps = 8/225 (3%)

Query: 116  ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
            I  G  H+  L S+  +++ G    G LGHG  TTQ +    +       V+QV+     
Sbjct: 3105 IAYGSSHSAPLTSSGELYTWGLGEYGRLGHGDNTTQ-LKPKMVKVLLGHRVIQVACGSRD 3163

Query: 175  AA--FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            A    +   G VF+ GD      G R  +     P+ +E L G    Q+  G  F+  LT
Sbjct: 3164 AQTLALTDEGLVFSWGDGDFGKLG-RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALT 3222

Query: 233  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
              G V T G   + +LGHG  +    P+ +  L     +V +A G  + LAVT +G VY+
Sbjct: 3223 KSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRG-KKIVHVAVGALHCLAVTDSGQVYA 3281

Query: 293  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
            +G   +   G+G      +P  +Q    +G  + RV+ G  H VA
Sbjct: 3282 WGDNDHGQQGNGTTTVNRKPTLVQGL--EGQKITRVACGSSHSVA 3324



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 50/167 (29%), Positives = 76/167 (45%), Gaps = 4/167 (2%)

Query: 118  TGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
            +G   TL L  + +V+S G    G LG G  +  C    +I+  +   VV+V      + 
Sbjct: 4154 SGDAQTLCLTDDDTVWSWGDGDYGKLGRG-GSDGCKVPMKIDSLTGLGVVKVECGSQFSV 4212

Query: 177  FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
             + +SG V+T G       GH   +  + RPR V+ L+G     +  G       T  G 
Sbjct: 4213 ALTKSGAVYTWGKGDYHRLGHGSDDH-VRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGE 4271

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
            V+T G N  GQLG G T     P+ +A L+    V ++A G ++ LA
Sbjct: 4272 VYTWGDNDEGQLGDGTTNAIQRPRLVAALQG-KKVNRVACGSAHTLA 4317



 Score = 52.4 bits (124), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 51/168 (30%), Positives = 74/168 (44%), Gaps = 6/168 (3%)

Query: 118 TGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
           +G   TL ++ N  V+S G    G LG G  +  C +   I       V++V      + 
Sbjct: 613 SGDAQTLAVTENGQVWSWGDGDYGKLGRG-GSDGCKTPKLIEKLQDLDVIKVRCGSQFSI 671

Query: 177 FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
            + + GQV++ G   +   GH  T   +  P+L+E L+G     V AG      LT    
Sbjct: 672 ALTKDGQVYSWGKGDNQRLGH-GTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLVLTEDSE 730

Query: 237 VHTCGSNTHGQLGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSYMLA 283
           VH+ GSN   Q  H DTL    P+  A P  +   +V IA GP+   A
Sbjct: 731 VHSWGSNDQCQ--HFDTLGVTKPEPTAFPGLDSKHIVGIACGPAQSFA 776



 Score = 52.0 bits (123), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 36/147 (24%), Positives = 71/147 (48%), Gaps = 5/147 (3%)

Query: 332  DEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 391
            D+  ++   SG +Y WG  + G LG  +     +P P  +L +   VQ+   ++  F + 
Sbjct: 3944 DDWTLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVT 4003

Query: 392  DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRG 449
              G +Y     G+G+ G    G ++ V  P +L+S++   + +++  +G  H + ++  G
Sbjct: 4004 ADGKLYA---TGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 4060

Query: 450  RLFGFGDNERAQLGHDTLRGCLEPTEI 476
             ++ +G+ E  +LGH     C  P  I
Sbjct: 4061 EVYSWGEAEDGKLGHGNRSPCDRPRVI 4087



 Score = 44.3 bits (103), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 41/139 (29%), Positives = 65/139 (46%), Gaps = 12/139 (8%)

Query: 344  VYTWGKGYCGALG--HGDEID-KTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 400
            V+ WG      LG   G +I   +  E LS+L     VQV    +  F +   G VY  G
Sbjct: 2962 VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALN---VVQVAGGSKSLFAVTVEGKVYSCG 3018

Query: 401  WMGFGSLGFPDRGVSD-KVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDN 457
                G LG    G+S   V  PR + +L ++ V +++  +G  H   +T  G++F +G+ 
Sbjct: 3019 EATNGRLGL---GMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEG 3075

Query: 458  ERAQLGHDTLRGCLEPTEI 476
            +  +LGH +   C +P  I
Sbjct: 3076 DDGKLGHFSRMNCDKPRLI 3094


>gi|380788265|gb|AFE66008.1| putative E3 ubiquitin-protein ligase HERC1 [Macaca mulatta]
          Length = 4861

 Score =  128 bits (322), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 103/339 (30%), Positives = 166/339 (48%), Gaps = 17/339 (5%)

Query: 115  QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQV---SA 170
            Q+  G+  T +I +N +V +CG    G LG G      V  T I+      V Q+     
Sbjct: 4031 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHV-LTVISALQGFVVTQLVTSCG 4089

Query: 171  SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
            S+ H+  + +SG+VF+ GD      GH +++R   RPR +EAL+G    Q++ G   +  
Sbjct: 4090 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQMSCGFKHSAV 4148

Query: 231  LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSVVQIAAGPSYMLAVTGNG 288
            +T  G + T G+  +G+LG G+T ++  P+ +  LE  ++G   Q+A G ++ LAV+ +G
Sbjct: 4149 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIG---QVACGLNHTLAVSADG 4205

Query: 289  -VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 347
             +V++FG G    LG G    +  P+ I      GI + +V+ G +  VAL   G+VYT+
Sbjct: 4206 SMVWAFGDGDYGKLGLGNSTAKSSPQKIDVL--CGIGIKKVACGTQFSVALTKDGHVYTF 4263

Query: 348  GKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSL 407
            G+     L  G   +   P+ +  L   +   V      T  L   G VY +G    G L
Sbjct: 4264 GQDRLIGLPEGRARNHNRPQQIPVLAGMIIEDVAVGAEHTLALASNGDVYAWGSNSEGQL 4323

Query: 408  GFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT 446
            G    G ++ V  P ++  L+  +V QIS G  H+   T
Sbjct: 4324 GL---GHTNHVREPTLVTGLQGKNVRQISAGRCHSAAWT 4359



 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 90/315 (28%), Positives = 144/315 (45%), Gaps = 25/315 (7%)

Query: 160 PSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTN------RPIFRPRLVEAL 213
           PS +    + A +     +   G V  CG  S    G  D+N      +  F P    ++
Sbjct: 400 PSFSDAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPH--RSI 457

Query: 214 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
           K V   + + G   T   T  G V + G   +G+LGHG++  +  PK I    +   VV 
Sbjct: 458 KKVSSSKGSDG--HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVC 515

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           ++AG  +  AVT +G +Y++G G    LGHG+ +     R I T  +   +V  VS G  
Sbjct: 516 VSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNS----RNIPTLVKDISNVGEVSCGSS 571

Query: 334 HVVALDSSGY-VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVD 392
           H +AL   G  V+++G G  G LGHGD      P+ + +L+     +VCA  + +  L  
Sbjct: 572 HTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTS 631

Query: 393 TGSVYGFG---WMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRG 449
           TG VY +G    +G GS            LRP++++ L A  +  +S G  H + ++   
Sbjct: 632 TGQVYAWGCGACLGCGS-------SEATALRPKLIEELAATRIVDVSIGDSHCLALSHDN 684

Query: 450 RLFGFGDNERAQLGH 464
            ++ +G+N   Q G 
Sbjct: 685 EVYAWGNNSMGQCGQ 699



 Score = 98.6 bits (244), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 91/266 (34%), Positives = 128/266 (48%), Gaps = 14/266 (5%)

Query: 122 HTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
           HTL   +   VFS G    G LGHG  +TQ              VV VSA   H+A V +
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528

Query: 181 SGQVFTCGDNSSFCCGHRDTN-RPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH-VH 238
            G+++T G+      GH D+N R I  P LV+ +  V   +V+ G + T  L+  G  V 
Sbjct: 529 DGELYTWGEGDFGRLGHGDSNSRNI--PTLVKDISNV--GEVSCGSSHTIALSKDGRTVW 584

Query: 239 TCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
           + G   +G+LGHGDT     PK I  L+ +  + ++ AG    LA+T  G VY++G G+ 
Sbjct: 585 SFGGGDNGKLGHGDTNRVYKPKVIEALQGM-FIRKVCAGSQSSLALTSTGQVYAWGCGA- 642

Query: 299 FCLGHG-EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 357
            CLG G  +   L+P+ I+        +V VS GD H +AL     VY WG    G  G 
Sbjct: 643 -CLGCGSSEATALRPKLIEEL--AATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQ 699

Query: 358 GDEIDK-TLPEPLSSLKSHLAVQVCA 382
           G+     T P+ +S L      Q+ A
Sbjct: 700 GNSTGPITKPKKVSGLDGIAIQQISA 725



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 87/320 (27%), Positives = 148/320 (46%), Gaps = 13/320 (4%)

Query: 160  PSAAHVVQVSASENHAAFVLQS-GQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPC 218
            PS +   QV   +N   FV+Q+ G V  CG+ S    G  +++  +    ++ AL+G   
Sbjct: 4024 PSFSQAQQVICGQN-CTFVIQANGTVLACGEGSYGRLGQGNSDD-LHVLTVISALQGFVV 4081

Query: 219  KQVTAGLNFTGF---LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA 275
             Q+       G    LT  G V + G   +G+LGHG++  +  P+ I  L+    VVQ++
Sbjct: 4082 TQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQG-EEVVQMS 4140

Query: 276  AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHV 335
             G  +   VT +G +++FG+G    LG G   ++  P  +     +G  + +V+ G  H 
Sbjct: 4141 CGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTAL--EGYQIGQVACGLNHT 4198

Query: 336  VALDSSG-YVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 394
            +A+ + G  V+ +G G  G LG G+   K+ P+ +  L      +V    + +  L   G
Sbjct: 4199 LAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDG 4258

Query: 395  SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 454
             VY FG      +G P+ G +    RP+ +  L    +  ++ G  HT+ +   G ++ +
Sbjct: 4259 HVYTFGQDRL--IGLPE-GRARNHNRPQQIPVLAGMIIEDVAVGAEHTLALASNGDVYAW 4315

Query: 455  GDNERAQLGHDTLRGCLEPT 474
            G N   QLG        EPT
Sbjct: 4316 GSNSEGQLGLGHTNHVREPT 4335



 Score = 84.7 bits (208), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 68/230 (29%), Positives = 108/230 (46%), Gaps = 11/230 (4%)

Query: 237  VHTCGSNTHGQLGH-GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 295
            V+  G+  HGQL   G  +  P   + AP        Q+  G +    +  NG V + G 
Sbjct: 3999 VYLWGAGRHGQLAEAGRNVMVP---AAAP--SFSQAQQVICGQNCTFVIQANGTVLACGE 4053

Query: 296  GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG-DEHVVALDSSGYVYTWGKGYCGA 354
            GS   LG G   D      I   +   +  +  S G D H +AL  SG V++WG G  G 
Sbjct: 4054 GSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGK 4113

Query: 355  LGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGV 414
            LGHG+   +  P  + +L+    VQ+    + + V+   G ++ FG   +G LG  +   
Sbjct: 4114 LGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN--T 4171

Query: 415  SDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRL-FGFGDNERAQLG 463
            S+K L P  + +L  + + Q++ GL HT+ V+  G + + FGD +  +LG
Sbjct: 4172 SNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLG 4220



 Score = 59.7 bits (143), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 49/180 (27%), Positives = 82/180 (45%), Gaps = 13/180 (7%)

Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 349
           VY +GS S+  L  G Q   LQP+   +F         + AG      + + G V   GK
Sbjct: 374 VYVWGSNSSHQLVEGTQEKILQPKLAPSFS----DAQTIEAGQYCTFVISTDGSVRACGK 429

Query: 350 GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKR----KTFVLVDTGSVYGFGWMGFG 405
           G  G LG GD  +++  + L + + H +++  +  +     T      G V+ +G   +G
Sbjct: 430 GSYGRLGLGDSNNQSTLKKL-TFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYG 488

Query: 406 SLGFPDRGVSDKVLRPRILD-SLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 464
            LG    G S     P+++   L+   V  +S G  H+  VT+ G L+ +G+ +  +LGH
Sbjct: 489 KLG---HGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGH 545



 Score = 49.3 bits (116), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 29/100 (29%), Positives = 48/100 (48%), Gaps = 2/100 (2%)

Query: 125 LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQV 184
           L S   V++ G   C  LG G      +    I   +A  +V VS  ++H   +    +V
Sbjct: 629 LTSTGQVYAWGCGAC--LGCGSSEATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEV 686

Query: 185 FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           +  G+NS   CG  ++  PI +P+ V  L G+  +Q++AG
Sbjct: 687 YAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAG 726



 Score = 48.9 bits (115), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 41/143 (28%), Positives = 67/143 (46%), Gaps = 9/143 (6%)

Query: 344  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 403
            VY WG G  G L    E  + +  P ++     A QV   +  TFV+   G+V   G   
Sbjct: 3999 VYLWGAGRHGQLA---EAGRNVMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGS 4055

Query: 404  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLY---HTVVVTDRGRLFGFGDNERA 460
            +G LG   +G SD +    ++ +L+   V+Q+ T      H++ +T+ G +F +GD +  
Sbjct: 4056 YGRLG---QGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYG 4112

Query: 461  QLGHDTLRGCLEPTEIFIQEMEE 483
            +LGH        P +I   + EE
Sbjct: 4113 KLGHGNSDRQRRPRQIEALQGEE 4135


>gi|158259079|dbj|BAF85498.1| unnamed protein product [Homo sapiens]
          Length = 1027

 Score =  128 bits (322), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 91/276 (32%), Positives = 142/276 (51%), Gaps = 10/276 (3%)

Query: 204 IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 263
           +  PR  +       + V  GL  T F+   G V+TCG N  GQLGH  +  R  P+ + 
Sbjct: 22  VLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKS--RKKPEQVV 79

Query: 264 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH-GEQHDELQPRAIQTFRRKG 322
            L+   ++V ++ G ++ LA+   G VY++G  S+  LG  G +     PR I++     
Sbjct: 80  ALD-AQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSL--SD 136

Query: 323 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK-TLPEPLSSLKSHLAVQVC 381
           I +V+V+ G  H +AL  +  V+ WG+   G LG G +  K T P+ L SL     +QV 
Sbjct: 137 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVA 196

Query: 382 ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYH 441
           A    +FVL  +G+++G+G   FG LG  D   +D+ + P +L SLR+  +  I  G  H
Sbjct: 197 AGGAHSFVLTLSGAIFGWGRNKFGQLGLNDE--NDRYV-PNLLKSLRSQKIVYICCGEDH 253

Query: 442 TVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF 477
           T  +T  G +F FG     QLGH++    + P ++F
Sbjct: 254 TAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVF 289



 Score =  121 bits (304), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 103/333 (30%), Positives = 153/333 (45%), Gaps = 13/333 (3%)

Query: 135 GSSLCGVLGHGPETTQCVSFTRI-NFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSF 193
           G++  G LG G    + V   R  +F     V  V     H  FVL  G V+TCG N   
Sbjct: 5   GNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGCNDLG 64

Query: 194 CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGH-GD 252
             GH  + +   +P  V AL       V+ G   T  L  +G V+  G ++ GQLG  G 
Sbjct: 65  QLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGS 121

Query: 253 TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ-HDELQ 311
                 P++I  L ++  +VQ+A G  + LA++    V+ +G      LG G     +  
Sbjct: 122 EECIRVPRNIKSLSDI-QIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTS 180

Query: 312 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSS 371
           P+ +++    GI  ++V+AG  H   L  SG ++ WG+   G LG  DE D+ +P  L S
Sbjct: 181 PQLLKSLL--GIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKS 238

Query: 372 LKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHH 431
           L+S   V +C  +  T  L   G V+ FG  G+G LG      +   + PR +  L    
Sbjct: 239 LRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG---HNSTSHEINPRKVFELMGSI 295

Query: 432 VSQISTGLYHT-VVVTDRGRLFGFGDNERAQLG 463
           V++I+ G  HT   V   GR++ FG     QLG
Sbjct: 296 VTEIACGRQHTSTFVPSSGRIYSFGLGGNGQLG 328



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 78/291 (26%), Positives = 138/291 (47%), Gaps = 8/291 (2%)

Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 179
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V VS  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVSCGEAHTLALN 100

Query: 180 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 239
             GQV+  G +S    G   +   I  PR +++L  +   QV  G   +  L+    V  
Sbjct: 101 DKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFC 160

Query: 240 CGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
            G N +GQLG G D   + +P+ +  L  +   +Q+AAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKYGQLGLGTDCKKQTSPQLLKSLLGI-PFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 299 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 358
             LG  +++D   P  +++ R + I  V +  G++H  AL   G V+T+G G  G LGH 
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRSQKI--VYICCGEDHTAALTKEGGVFTFGAGGYGQLGHN 277

Query: 359 DEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLG 408
               +  P  +  L   +  ++ C R+  +  +  +G +Y FG  G G LG
Sbjct: 278 STSHEINPRKVFELMGSIVTEIACGRQHTSTFVPSSGRIYSFGLGGNGQLG 328



 Score = 98.6 bits (244), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 83/274 (30%), Positives = 130/274 (47%), Gaps = 10/274 (3%)

Query: 98  QSVEHSSDIVETSAGNM-QITTGRYHTLLISNS-SVFSCGSSLCGVLGH-GPETTQCVSF 154
           +S +    +V   A N+  ++ G  HTL +++   V++ G    G LG  G E  +C+  
Sbjct: 70  KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGSE--ECIRV 127

Query: 155 TR-INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEAL 213
            R I   S   +VQV+    H+  + ++ +VF  G N     G     +    P+L+++L
Sbjct: 128 PRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSL 187

Query: 214 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
            G+P  QV AG   +  LT+ G +   G N  GQLG  D  DR  P  +  L     +V 
Sbjct: 188 LGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRS-QKIVY 246

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           I  G  +  A+T  G V++FG+G    LGH     E+ PR +  F   G  V  ++ G +
Sbjct: 247 ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTEIACGRQ 304

Query: 334 HV-VALDSSGYVYTWGKGYCGALGHGDEIDKTLP 366
           H    + SSG +Y++G G  G LG G   ++  P
Sbjct: 305 HTSTFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338



 Score = 76.6 bits (187), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 68/229 (29%), Positives = 108/229 (47%), Gaps = 11/229 (4%)

Query: 91  KRVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETT 149
           +  +R  ++++  SDI       +Q+  G YH+L +S +S VF  G +  G LG G +  
Sbjct: 122 EECIRVPRNIKSLSDI-----QIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCK 176

Query: 150 QCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRL 209
           +  S   +        +QV+A   H+  +  SG +F  G N     G  D N   + P L
Sbjct: 177 KQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDR-YVPNL 235

Query: 210 VEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG 269
           +++L+      +  G + T  LT  G V T G+  +GQLGH  T     P+ +   E +G
Sbjct: 236 LKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMG 293

Query: 270 SVV-QIAAGPSYMLA-VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQ 316
           S+V +IA G  +    V  +G +YSFG G N  LG G   +   P  ++
Sbjct: 294 SIVTEIACGRQHTSTFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342


>gi|444917133|ref|ZP_21237237.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
 gi|444711259|gb|ELW52206.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
          Length = 1081

 Score =  128 bits (322), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 105/347 (30%), Positives = 160/347 (46%), Gaps = 21/347 (6%)

Query: 121 YHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 179
           YH+L L S+ +V++ G +  G LG   +T+     +    P  A   +++A   H+  + 
Sbjct: 460 YHSLALRSDGTVWAWGDNAYGQLG---DTSGGRRPSPAQVPGVAGATEIAAGTYHSLALR 516

Query: 180 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 239
             G V+T GDNS    G   T R    P +V  L  +    V AGL  +  L   G V  
Sbjct: 517 SDGTVWTWGDNSYGQLGAGATPRGPRAPAVVPGLAVI--THVAAGLFHSLALDSSGQVWA 574

Query: 240 CGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNF 299
            G N +GQLG G T  R  P  ++ L     +  I AGPSY +A+  +G V+++G  SN 
Sbjct: 575 WGDNVYGQLGDGSTTSRNVPGRVSGLPA--GIQAIVAGPSYSVALGADGSVWTWGENSNG 632

Query: 300 CLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGD 359
            LG G       P  +         +V +S    H VALD++G ++ WG+   G LG+G 
Sbjct: 633 QLGDGTTTARPVPARVSLP----ATLVALSTRGSHTVALDTTGMLWAWGRNVSGQLGNGT 688

Query: 360 EIDKTLPEPLSSLKSHLAVQVCARK-RKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKV 418
            + ++ P  + S      VQ  A   R TF L   G+V+ +G    G LG      S   
Sbjct: 689 LVSESTPRRVPSFAR---VQGFASGLRTTFALRADGTVWAWGDNSLGQLGNGATSAS--- 742

Query: 419 LRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHD 465
             P  + ++       +++G  H + V+  G +F FG N R QLG++
Sbjct: 743 --PVPVQAVGYPRTVPLASGAQHVLAVSSDGSVFSFGSNSRGQLGYE 787



 Score =  119 bits (298), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 102/350 (29%), Positives = 158/350 (45%), Gaps = 23/350 (6%)

Query: 125  LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQV 184
            L ++ +V++ G +  G LG+G  +   V    + +P     V +++   H   V   G V
Sbjct: 717  LRADGTVWAWGDNSLGQLGNGATSASPVPVQAVGYP---RTVPLASGAQHVLAVSSDGSV 773

Query: 185  FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPC-KQVTAGLNFTGFLTIRGHVHTCGSN 243
            F+ G NS    G+  +      PR    L G  C + V AG  F+  L+  G V   G N
Sbjct: 774  FSFGSNSRGQLGYEGSATQT-SPRW---LTGPECIEAVAAGALFSLALSCDGGVWAWGDN 829

Query: 244  THGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH 303
              GQLG G    R  P  +  L  V   V IAAG  + LAV  +G V+++G+  +  LG 
Sbjct: 830  GSGQLGDGAVTARTAPARVPGLAHV---VAIAAGSDHALAVRADGTVWAWGANGSGQLGD 886

Query: 304  GEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK 363
            G       P  ++      + VV V+ G  H +A+ + G V+ WG    G LG G    +
Sbjct: 887  GTTTSRAVPMQVKEL----VDVVAVAGGSGHSLAVRADGTVWAWGANGSGQLGDGTTTSR 942

Query: 364  TLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRI 423
            TLP  +S+L    A+   A+   +  L + G V+ +G  G G LG    G +    RP  
Sbjct: 943  TLPVFVSTLSGVQAIASGAQH--SLALAEGGVVWAWGANGSGQLG---DGTTTSRTRPVQ 997

Query: 424  LDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEP 473
            +  L    V  +  G   ++ +T  G+++ +G+N   QLG  TL    +P
Sbjct: 998  VSGLSG--VQGLVAGASFSLALTP-GKVWSWGNNSAGQLGDGTLNSRSQP 1044



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 109/415 (26%), Positives = 173/415 (41%), Gaps = 67/415 (16%)

Query: 111 AGNMQITTG-RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS 169
           AG   I  G  Y   L ++ SV++ G +  G LG G  T + V   R++ P  A +V +S
Sbjct: 602 AGIQAIVAGPSYSVALGADGSVWTWGENSNGQLGDGTTTARPVP-ARVSLP--ATLVALS 658

Query: 170 ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
              +H   +  +G ++  G N S   G+  T      PR V +   V  +   +GL  T 
Sbjct: 659 TRGSHTVALDTTGMLWAWGRNVSGQLGN-GTLVSESTPRRVPSFARV--QGFASGLRTTF 715

Query: 230 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG--SVVQIAAGPSYMLAVTGN 287
            L   G V   G N+ GQLG+G T   P P     ++ VG    V +A+G  ++LAV+ +
Sbjct: 716 ALRADGTVWAWGDNSLGQLGNGATSASPVP-----VQAVGYPRTVPLASGAQHVLAVSSD 770

Query: 288 GVVYSFGSGSNFCLGHGEQHDELQPR-------------------------AIQTFRRKG 322
           G V+SFGS S   LG+     +  PR                          +  +   G
Sbjct: 771 GSVFSFGSNSRGQLGYEGSATQTSPRWLTGPECIEAVAAGALFSLALSCDGGVWAWGDNG 830

Query: 323 ---------------------IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEI 361
                                 HVV ++AG +H +A+ + G V+ WG    G LG G   
Sbjct: 831 SGQLGDGAVTARTAPARVPGLAHVVAIAAGSDHALAVRADGTVWAWGANGSGQLGDGTTT 890

Query: 362 DKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRP 421
            + +P  +  L     V V      +  +   G+V+ +G  G G LG  D   + + L P
Sbjct: 891 SRAVPMQVKELVD--VVAVAGGSGHSLAVRADGTVWAWGANGSGQLG--DGTTTSRTL-P 945

Query: 422 RILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 476
             + +L    V  I++G  H++ + + G ++ +G N   QLG  T      P ++
Sbjct: 946 VFVSTLSG--VQAIASGAQHSLALAEGGVVWAWGANGSGQLGDGTTTSRTRPVQV 998



 Score = 95.9 bits (237), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 103/340 (30%), Positives = 154/340 (45%), Gaps = 25/340 (7%)

Query: 132 FSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNS 191
              G++  G LG+G  + + +       PS      ++A ++H       G V+  GDN+
Sbjct: 371 LGWGANGSGQLGNGSSSVRALPG---RVPSLTAGASLAAGDHHVFLRQADGSVWAWGDNT 427

Query: 192 SFCCGHRDTNRPIFRP---RLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQL 248
               G       + RP   RL   L  V  + ++A    +  L   G V   G N +GQL
Sbjct: 428 ---YGQLGDGTLVSRPAPVRLSSTLTSV--RALSASSYHSLALRSDGTVWAWGDNAYGQL 482

Query: 249 GHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHD 308
           G      RP+P   A +  V    +IAAG  + LA+  +G V+++G  S   LG G    
Sbjct: 483 GDTSGGRRPSP---AQVPGVAGATEIAAGTYHSLALRSDGTVWTWGDNSYGQLGAGAT-- 537

Query: 309 ELQPRAIQTFRRKGIHVVR-VSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPE 367
              PRA       G+ V+  V+AG  H +ALDSSG V+ WG    G LG G    + +P 
Sbjct: 538 PRGPRAPAVV--PGLAVITHVAAGLFHSLALDSSGQVWAWGDNVYGQLGDGSTTSRNVPG 595

Query: 368 PLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSL 427
            +S L + +   + A    +  L   GSV+ +G    G LG  D   + + +  R+  SL
Sbjct: 596 RVSGLPAGIQA-IVAGPSYSVALGADGSVWTWGENSNGQLG--DGTTTARPVPARV--SL 650

Query: 428 RAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTL 467
            A  V+ +ST   HTV +   G L+ +G N   QLG+ TL
Sbjct: 651 PATLVA-LSTRGSHTVALDTTGMLWAWGRNVSGQLGNGTL 689



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 107/419 (25%), Positives = 163/419 (38%), Gaps = 73/419 (17%)

Query: 112 GNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSAS 171
           G   I  G  H+L + N +V++ G++  G LG G  T++    T         VV ++A 
Sbjct: 148 GVTAIAAGNLHSLALINGAVWAWGNNTTGQLGDGSSTSRS---TPAKVAGLTEVVAIAAG 204

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCG-----HRDTNRPIFRPRLVEALKGVPCKQVTAGLN 226
           + H+  + + G V+  G N S   G      R T   +     + AL G     V A   
Sbjct: 205 DFHSLALKRDGTVWAWGGNYSGQLGDGTLDSRSTPVRVSGLTGIVALAGGGSHSVAASST 264

Query: 227 FTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG--SVVQIAAGPSYMLAV 284
                T+ G V   G NT+GQLG+G  +      S+ PLE  G   VV +A+G S+ LA+
Sbjct: 265 -----TLGGKVWAWGDNTYGQLGNGGDV-----SSLLPLEVPGLTQVVALASGTSHSLAL 314

Query: 285 TGNGVVYSFGS----------------------------------------GSNFCLGHG 304
            G+  V+++G                                         G N  LG G
Sbjct: 315 RGDDSVWAWGDNAQAQTAQTGTSVQRVPVRVSGVSDAQALACGNAFSLVGRGDNVTLGWG 374

Query: 305 EQHDELQPRAIQTFRRKGIHV------VRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 358
                       + R     V        ++AGD HV    + G V+ WG    G LG G
Sbjct: 375 ANGSGQLGNGSSSVRALPGRVPSLTAGASLAAGDHHVFLRQADGSVWAWGDNTYGQLGDG 434

Query: 359 DEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKV 418
             + +  P  LSS  + +   + A    +  L   G+V+ +G   +G LG    G     
Sbjct: 435 TLVSRPAPVRLSSTLTSVRA-LSASSYHSLALRSDGTVWAWGDNAYGQLGDTSGG----- 488

Query: 419 LRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHD-TLRGCLEPTEI 476
            RP           ++I+ G YH++ +   G ++ +GDN   QLG   T RG   P  +
Sbjct: 489 RRPSPAQVPGVAGATEIAAGTYHSLALRSDGTVWTWGDNSYGQLGAGATPRGPRAPAVV 547



 Score = 91.7 bits (226), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 90/300 (30%), Positives = 134/300 (44%), Gaps = 26/300 (8%)

Query: 167 QVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN 226
           +++A  NH+ +V  +G V+  G N+    G   T +    P  V  L GV    V AG  
Sbjct: 52  RLAAGLNHSLYVTPAGTVWAWGANAQGQLGEGSTLQ-HSTPTQVVGLTGVTA--VAAGNT 108

Query: 227 FTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTG 286
            +  L   G V T G+NT GQLG G +  R  P  +A L     V  IAAG  + LA+  
Sbjct: 109 HSMALREEGTVWTWGTNTDGQLGDGVS-QRSVPAQVAGLT---GVTAIAAGNLHSLALI- 163

Query: 287 NGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYT 346
           NG V+++G+ +   LG G       P  +         VV ++AGD H +AL   G V+ 
Sbjct: 164 NGAVWAWGNNTTGQLGDGSSTSRSTPAKVAGL----TEVVAIAAGDFHSLALKRDGTVWA 219

Query: 347 WGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQ-----VCARKRKTFVLVDTGSVYGFGW 401
           WG  Y G LG G    ++ P  +S L   +A+        A    T      G V+ +G 
Sbjct: 220 WGGNYSGQLGDGTLDSRSTPVRVSGLTGIVALAGGGSHSVAASSTTL----GGKVWAWGD 275

Query: 402 MGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQ 461
             +G LG    G     L P  +  L    V  +++G  H++ +     ++ +GDN +AQ
Sbjct: 276 NTYGQLG---NGGDVSSLLPLEVPGLT--QVVALASGTSHSLALRGDDSVWAWGDNAQAQ 330



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 75/268 (27%), Positives = 126/268 (47%), Gaps = 20/268 (7%)

Query: 212 ALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSV 271
           +++G P + + AGLN + ++T  G V   G+N  GQLG G TL   TP  +  L     V
Sbjct: 45  SVQGRPYR-LAAGLNHSLYVTPAGTVWAWGANAQGQLGEGSTLQHSTPTQVVGLT---GV 100

Query: 272 VQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG 331
             +AAG ++ +A+   G V+++G+ ++  LG     D +  R++         V  ++AG
Sbjct: 101 TAVAAGNTHSMALREEGTVWTWGTNTDGQLG-----DGVSQRSVPAQVAGLTGVTAIAAG 155

Query: 332 DEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 391
           + H +AL + G V+ WG    G LG G    ++ P  ++ L     V + A    +  L 
Sbjct: 156 NLHSLALIN-GAVWAWGNNTTGQLGDGSSTSRSTPAKVAGLTE--VVAIAAGDFHSLALK 212

Query: 392 DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDR--- 448
             G+V+ +G    G LG    G  D    P  +  L    +  ++ G  H+V  +     
Sbjct: 213 RDGTVWAWGGNYSGQLG---DGTLDSRSTPVRVSGLTG--IVALAGGGSHSVAASSTTLG 267

Query: 449 GRLFGFGDNERAQLGHDTLRGCLEPTEI 476
           G+++ +GDN   QLG+      L P E+
Sbjct: 268 GKVWAWGDNTYGQLGNGGDVSSLLPLEV 295



 Score = 83.2 bits (204), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 95/347 (27%), Positives = 145/347 (41%), Gaps = 30/347 (8%)

Query: 114  MQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
            + + +G  H L +S + SVFS GS+  G LG+    TQ    T   + +    ++  A+ 
Sbjct: 755  VPLASGAQHVLAVSSDGSVFSFGSNSRGQLGYEGSATQ----TSPRWLTGPECIEAVAAG 810

Query: 173  NHAAFVLQ-SGQVFTCGDNSSFCCGHRD-TNR--PIFRPRLVEALKGVPCKQVTAGLNFT 228
               +  L   G V+  GDN S   G    T R  P   P L   +       + AG +  
Sbjct: 811  ALFSLALSCDGGVWAWGDNGSGQLGDGAVTARTAPARVPGLAHVVA------IAAGSDHA 864

Query: 229  GFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG 288
              +   G V   G+N  GQLG G T  R  P  +   +E+  VV +A G  + LAV  +G
Sbjct: 865  LAVRADGTVWAWGANGSGQLGDGTTTSRAVPMQV---KELVDVVAVAGGSGHSLAVRADG 921

Query: 289  VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 348
             V+++G+  +  LG G       P  + T       V  +++G +H +AL   G V+ WG
Sbjct: 922  TVWAWGANGSGQLGDGTTTSRTLPVFVSTLS----GVQAIASGAQHSLALAEGGVVWAWG 977

Query: 349  KGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLG 408
                G LG G    +T P  +S L     VQ         + +  G V+ +G    G LG
Sbjct: 978  ANGSGQLGDGTTTSRTRPVQVSGLS---GVQGLVAGASFSLALTPGKVWSWGNNSAGQLG 1034

Query: 409  FPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFG 455
                G  +   +P    +L +     +S G  HTVV+        +G
Sbjct: 1035 ---DGTLNSRSQPGAGPTLSSFVA--LSAGAQHTVVLRSDDSFLSWG 1076


>gi|332028555|gb|EGI68592.1| Putative E3 ubiquitin-protein ligase HERC4 [Acromyrmex echinatior]
          Length = 1049

 Score =  128 bits (322), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 100/349 (28%), Positives = 171/349 (48%), Gaps = 17/349 (4%)

Query: 131 VFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSASENHAAFVLQSGQVFTCGD 189
           +F  GS++ G LG G    + +   R ++F  A++V Q++  EN+   + + G+V++CG+
Sbjct: 1   MFCWGSTIHGELGLGGIEDENIFMPREVDFIEASNVEQIACGENYTVAITKEGKVYSCGN 60

Query: 190 NSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLG 249
           N     GH    +   R +L+  L     +++  G   T  +   G + + G N +GQLG
Sbjct: 61  NDYGQLGHEKARK---RLQLIPGLDAFVFRKIACGNCHTLAVNEWGQLFSWGCNMNGQLG 117

Query: 250 HG--DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGE-Q 306
               D  +R  P+ I  L     +VQIA G  + +A+T +G +Y++GS     LG G   
Sbjct: 118 LNSVDCTER-VPRMIKVL-GTNVIVQIACGTEHSIALTNDGELYAWGSNREGQLGLGSYT 175

Query: 307 HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP 366
             E++P+ I T     + +  ++ G  H + +  SG V++WG+   G LG  D   + LP
Sbjct: 176 TTEIKPKRISTL--AAVPIAFIACGGYHTIVISKSGAVFSWGRNTFGQLGLNDVQQRNLP 233

Query: 367 EPLSSLK-SHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILD 425
             L +L+ + +    C  +   F+ +D G V+  G   +G LG    G +   + PR + 
Sbjct: 234 CQLRTLRNAKVCYATCGEEFSVFLTMD-GGVFTCGAGMYGQLG---HGNTTNEILPRQVM 289

Query: 426 SLRAHHVSQISTGLYHTV-VVTDRGRLFGFGDNERAQLGHDTLRGCLEP 473
            L    V+QIS G  HT+ +V  RGR++ +G     QLG+   +    P
Sbjct: 290 ELMGSTVTQISCGKRHTLALVPSRGRVYAWGLGGAGQLGNRASQSATTP 338



 Score =  102 bits (255), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 91/307 (29%), Positives = 139/307 (45%), Gaps = 10/307 (3%)

Query: 105 DIVETSAGNMQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAA 163
           D +E S    QI  G  +T+ I+    V+SCG++  G LGH     +      ++   A 
Sbjct: 29  DFIEASNVE-QIACGENYTVAITKEGKVYSCGNNDYGQLGHEKARKRLQLIPGLD---AF 84

Query: 164 HVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTA 223
              +++    H   V + GQ+F+ G N +   G    +     PR+++ L      Q+  
Sbjct: 85  VFRKIACGNCHTLAVNEWGQLFSWGCNMNGQLGLNSVDCTERVPRMIKVLGTNVIVQIAC 144

Query: 224 GLNFTGFLTIRGHVHTCGSNTHGQLGHGD-TLDRPTPKSIAPLEEVGSVVQIAAGPSYML 282
           G   +  LT  G ++  GSN  GQLG G  T     PK I+ L  V  +  IA G  + +
Sbjct: 145 GTEHSIALTNDGELYAWGSNREGQLGLGSYTTTEIKPKRISTLAAV-PIAFIACGGYHTI 203

Query: 283 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
            ++ +G V+S+G  +   LG  +      P  ++T R     V   + G+E  V L   G
Sbjct: 204 VISKSGAVFSWGRNTFGQLGLNDVQQRNLPCQLRTLRNA--KVCYATCGEEFSVFLTMDG 261

Query: 343 YVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDT-GSVYGFGW 401
            V+T G G  G LGHG+  ++ LP  +  L      Q+   KR T  LV + G VY +G 
Sbjct: 262 GVFTCGAGMYGQLGHGNTTNEILPRQVMELMGSTVTQISCGKRHTLALVPSRGRVYAWGL 321

Query: 402 MGFGSLG 408
            G G LG
Sbjct: 322 GGAGQLG 328



 Score = 89.7 bits (221), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 74/256 (28%), Positives = 113/256 (44%), Gaps = 7/256 (2%)

Query: 115 QITTGRYHTLLISN-SSVFSCGSSLCGVLG-HGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +I  G  HTL ++    +FS G ++ G LG +  + T+ V    I       +VQ++   
Sbjct: 88  KIACGNCHTLAVNEWGQLFSWGCNMNGQLGLNSVDCTERVP-RMIKVLGTNVIVQIACGT 146

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            H+  +   G+++  G N     G         +P+ +  L  VP   +  G   T  ++
Sbjct: 147 EHSIALTNDGELYAWGSNREGQLGLGSYTTTEIKPKRISTLAAVPIAFIACGGYHTIVIS 206

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
             G V + G NT GQLG  D   R  P  +  L     V     G  + + +T +G V++
Sbjct: 207 KSGAVFSWGRNTFGQLGLNDVQQRNLPCQLRTLRN-AKVCYATCGEEFSVFLTMDGGVFT 265

Query: 293 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL-DSSGYVYTWGKGY 351
            G+G    LGHG   +E+ PR  Q     G  V ++S G  H +AL  S G VY WG G 
Sbjct: 266 CGAGMYGQLGHGNTTNEILPR--QVMELMGSTVTQISCGKRHTLALVPSRGRVYAWGLGG 323

Query: 352 CGALGHGDEIDKTLPE 367
            G LG+      T P+
Sbjct: 324 AGQLGNRASQSATTPQ 339



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 70/235 (29%), Positives = 114/235 (48%), Gaps = 8/235 (3%)

Query: 86  CNGNWKRVLRFLQSVEHSSDIVETSAGNM--QITTGRYHTLLISNS-SVFSCGSSLCGVL 142
           CN N +  L  +   E    +++    N+  QI  G  H++ ++N   +++ GS+  G L
Sbjct: 110 CNMNGQLGLNSVDCTERVPRMIKVLGTNVIVQIACGTEHSIALTNDGELYAWGSNREGQL 169

Query: 143 GHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNR 202
           G G  TT  +   RI+  +A  +  ++    H   + +SG VF+ G N+    G  D  +
Sbjct: 170 GLGSYTTTEIKPKRISTLAAVPIAFIACGGYHTIVISKSGAVFSWGRNTFGQLGLNDVQQ 229

Query: 203 PIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSI 262
               P  +  L+       T G  F+ FLT+ G V TCG+  +GQLGHG+T +   P+ +
Sbjct: 230 RNL-PCQLRTLRNAKVCYATCGEEFSVFLTMDGGVFTCGAGMYGQLGHGNTTNEILPRQV 288

Query: 263 APLEEVGS-VVQIAAGPSYMLA-VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAI 315
             +E +GS V QI+ G  + LA V   G VY++G G    LG+        P+ +
Sbjct: 289 --MELMGSTVTQISCGKRHTLALVPSRGRVYAWGLGGAGQLGNRASQSATTPQVV 341


>gi|224495959|ref|NP_001139096.1| probable E3 ubiquitin-protein ligase HERC3 [Danio rerio]
          Length = 1046

 Score =  128 bits (322), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 95/280 (33%), Positives = 137/280 (48%), Gaps = 12/280 (4%)

Query: 204 IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 263
           +F PR      G   K+V  G   + FL   G V+TCGSN+ GQLGH     RP      
Sbjct: 22  VFEPRSCCVFDGRGLKEVACGNQHSLFLLHDGSVYTCGSNSCGQLGHDKGGSRPELVGAL 81

Query: 264 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQ-PRAIQTFRRKG 322
             +++  V   + G ++ LAV   G V+++G+G    LG G   + ++ PR I+      
Sbjct: 82  DAQKISGV---SCGQAHSLAVNEQGQVFAWGAGDGGQLGLGTAEEAVRVPRLIKKLCEHR 138

Query: 323 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTL-PEPLSSLKSHLAVQVC 381
           I   +V  G+ H +AL   G ++ WG+   G LG G     TL P+PL SL      Q+ 
Sbjct: 139 IS--QVMCGNHHCIALSKDGQLFVWGENSSGQLGLGKGEPSTLSPQPLKSLCGIPLTQIS 196

Query: 382 ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYH 441
           A    +F L  +G+V+G+G    G LG  D    D+ + P  +  LR+  V  IS G  H
Sbjct: 197 AGGDHSFALSFSGAVFGWGKNSAGQLGLNDE--QDRAV-PCHIKFLRSQKVVYISCGEEH 253

Query: 442 TVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQEM 481
           T  +T  G LF FG+  + QLGHD+ R   EP    + E+
Sbjct: 254 TAALTKEGGLFTFGNGSKGQLGHDSTRN--EPLPRRVMEL 291



 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 95/300 (31%), Positives = 148/300 (49%), Gaps = 12/300 (4%)

Query: 167 QVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN 226
           +V+    H+ F+L  G V+TCG NS   CG    ++   RP LV AL       V+ G  
Sbjct: 38  EVACGNQHSLFLLHDGSVYTCGSNS---CGQLGHDKGGSRPELVGALDAQKISGVSCGQA 94

Query: 227 FTGFLTIRGHVHTCGSNTHGQLGHGDTLDRP-TPKSIAPLEEVGSVVQIAAGPSYMLAVT 285
            +  +  +G V   G+   GQLG G   +    P+ I  L E   + Q+  G  + +A++
Sbjct: 95  HSLAVNEQGQVFAWGAGDGGQLGLGTAEEAVRVPRLIKKLCE-HRISQVMCGNHHCIALS 153

Query: 286 GNGVVYSFGSGSNFCLGHGE-QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
            +G ++ +G  S+  LG G+ +   L P+ +++    GI + ++SAG +H  AL  SG V
Sbjct: 154 KDGQLFVWGENSSGQLGLGKGEPSTLSPQPLKSL--CGIPLTQISAGGDHSFALSFSGAV 211

Query: 345 YTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGF 404
           + WGK   G LG  DE D+ +P  +  L+S   V +   +  T  L   G ++ FG    
Sbjct: 212 FGWGKNSAGQLGLNDEQDRAVPCHIKFLRSQKVVYISCGEEHTAALTKEGGLFTFGNGSK 271

Query: 405 GSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV-VTDRGRLFGFGDNERAQLG 463
           G LG  D   ++ +  PR +  L    VSQI+ G  HT+  V   G ++ FG N + QLG
Sbjct: 272 GQLGH-DSTRNEPL--PRRVMELMGTEVSQIACGRNHTLAFVPSTGLIYAFGCNTQGQLG 328



 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 95/311 (30%), Positives = 142/311 (45%), Gaps = 21/311 (6%)

Query: 112 GNMQITTGRYHTL-LISNSSVFSCGSSLCGVLGHG-----PETTQCVSFTRINFPSAAHV 165
           G  ++  G  H+L L+ + SV++CGS+ CG LGH      PE    +   +I+       
Sbjct: 35  GLKEVACGNQHSLFLLHDGSVYTCGSNSCGQLGHDKGGSRPELVGALDAQKIS------- 87

Query: 166 VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 225
             VS  + H+  V + GQVF  G       G       +  PRL++ L      QV  G 
Sbjct: 88  -GVSCGQAHSLAVNEQGQVFAWGAGDGGQLGLGTAEEAVRVPRLIKKLCEHRISQVMCGN 146

Query: 226 NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSV--VQIAAGPSYMLA 283
           +    L+  G +   G N+ GQLG G     P+  S  PL+ +  +   QI+AG  +  A
Sbjct: 147 HHCIALSKDGQLFVWGENSSGQLGLGK--GEPSTLSPQPLKSLCGIPLTQISAGGDHSFA 204

Query: 284 VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 343
           ++ +G V+ +G  S   LG  ++ D   P  I+  R +   VV +S G+EH  AL   G 
Sbjct: 205 LSFSGAVFGWGKNSAGQLGLNDEQDRAVPCHIKFLRSQ--KVVYISCGEEHTAALTKEGG 262

Query: 344 VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWM 402
           ++T+G G  G LGH    ++ LP  +  L      Q+ C R      +  TG +Y FG  
Sbjct: 263 LFTFGNGSKGQLGHDSTRNEPLPRRVMELMGTEVSQIACGRNHTLAFVPSTGLIYAFGCN 322

Query: 403 GFGSLGFPDRG 413
             G LG   RG
Sbjct: 323 TQGQLGTGIRG 333



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 79/261 (30%), Positives = 127/261 (48%), Gaps = 7/261 (2%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAH-VVQVSASEN 173
           ++ G+ H+L ++    VF+ G+   G LG G    + V   R+      H + QV    +
Sbjct: 89  VSCGQAHSLAVNEQGQVFAWGAGDGGQLGLG-TAEEAVRVPRLIKKLCEHRISQVMCGNH 147

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
           H   + + GQ+F  G+NSS   G          P+ +++L G+P  Q++AG + +  L+ 
Sbjct: 148 HCIALSKDGQLFVWGENSSGQLGLGKGEPSTLSPQPLKSLCGIPLTQISAGGDHSFALSF 207

Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
            G V   G N+ GQLG  D  DR  P  I  L     VV I+ G  +  A+T  G +++F
Sbjct: 208 SGAVFGWGKNSAGQLGLNDEQDRAVPCHIKFLRS-QKVVYISCGEEHTAALTKEGGLFTF 266

Query: 294 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA-LDSSGYVYTWGKGYC 352
           G+GS   LGH    +E  PR +      G  V +++ G  H +A + S+G +Y +G    
Sbjct: 267 GNGSKGQLGHDSTRNEPLPRRVMELM--GTEVSQIACGRNHTLAFVPSTGLIYAFGCNTQ 324

Query: 353 GALGHGDEIDKTLPEPLSSLK 373
           G LG G       P P+S+++
Sbjct: 325 GQLGTGIRGSAKSPVPVSNIQ 345



 Score = 66.6 bits (161), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 57/157 (36%), Positives = 75/157 (47%), Gaps = 9/157 (5%)

Query: 115 QITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
           QI+ G  H+  +S S +VF  G +  G LG   E  + V    I F  +  VV +S  E 
Sbjct: 194 QISAGGDHSFALSFSGAVFGWGKNSAGQLGLNDEQDRAVP-CHIKFLRSQKVVYISCGEE 252

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDT-NRPIFRPRLVEALKGVPCKQVTAGLNFT-GFL 231
           H A + + G +FT G+ S    GH  T N P+  PR V  L G    Q+  G N T  F+
Sbjct: 253 HTAALTKEGGLFTFGNGSKGQLGHDSTRNEPL--PRRVMELMGTEVSQIACGRNHTLAFV 310

Query: 232 TIRGHVHTCGSNTHGQLGHG--DTLDRPTPKS-IAPL 265
              G ++  G NT GQLG G   +   P P S I PL
Sbjct: 311 PSTGLIYAFGCNTQGQLGTGIRGSAKSPVPVSNIQPL 347


>gi|395741726|ref|XP_003777632.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 [Pongo
           abelii]
          Length = 1049

 Score =  128 bits (322), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 91/276 (32%), Positives = 142/276 (51%), Gaps = 10/276 (3%)

Query: 204 IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 263
           +  PR  +       + V  GL  T F+   G V+TCG N  GQLGH  +  R  P+ + 
Sbjct: 22  VLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKS--RKKPEQVV 79

Query: 264 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH-GEQHDELQPRAIQTFRRKG 322
            L+   ++V ++ G ++ LA+   G VY++G  S+  LG  G +     PR I++     
Sbjct: 80  ALD-AQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSL--SD 136

Query: 323 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK-TLPEPLSSLKSHLAVQVC 381
           I +V+V+ G  H +AL  +  V+ WG+   G LG G +  K T P+ L SL     +QV 
Sbjct: 137 IQIVQVACGYCHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVA 196

Query: 382 ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYH 441
           A    +FVL  +G+++G+G   FG LG  D   +D+ + P +L SLR+  +  I  G  H
Sbjct: 197 AGGAHSFVLTLSGAIFGWGRNKFGQLGLNDE--NDRYV-PNLLKSLRSQKIVYICCGEDH 253

Query: 442 TVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF 477
           T  +T  G +F FG     QLGH++    + P ++F
Sbjct: 254 TAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVF 289



 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 104/333 (31%), Positives = 153/333 (45%), Gaps = 13/333 (3%)

Query: 135 GSSLCGVLGHGPETTQCVSFTRI-NFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSF 193
           G++  G LG G    + V   R  +F     V  V     H  FVL  G V+TCG N   
Sbjct: 5   GNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLG 64

Query: 194 CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGH-GD 252
             GH  + +   +P  V AL       V+ G   T  L  +G V+  G ++ GQLG  G 
Sbjct: 65  QLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGS 121

Query: 253 TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ-HDELQ 311
                 P++I  L ++  +VQ+A G  + LA++    V+ +G      LG G     +  
Sbjct: 122 EECIRVPRNIKSLSDI-QIVQVACGYCHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTS 180

Query: 312 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSS 371
           P+ +++    GI  ++V+AG  H   L  SG ++ WG+   G LG  DE D+ +P  L S
Sbjct: 181 PQLLKSLL--GIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKS 238

Query: 372 LKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHH 431
           L+S   V +C  +  T  L   G V+ FG  G+G LG      +   + PR +  L    
Sbjct: 239 LRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG---HNSTSHEINPRKVFELMGSI 295

Query: 432 VSQISTGLYHT-VVVTDRGRLFGFGDNERAQLG 463
           V+QI+ G  HT   V   GR++ FG     QLG
Sbjct: 296 VTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  108 bits (270), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 79/291 (27%), Positives = 138/291 (47%), Gaps = 8/291 (2%)

Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 179
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V VS  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVSCGEAHTLALN 100

Query: 180 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 239
             GQV+  G +S    G   +   I  PR +++L  +   QV  G   +  L+    V  
Sbjct: 101 DKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYCHSLALSKASEVFC 160

Query: 240 CGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
            G N +GQLG G D   + +P+ +  L  +   +Q+AAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKYGQLGLGTDCKKQTSPQLLKSLLGI-PFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 299 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 358
             LG  +++D   P  +++ R + I  V +  G++H  AL   G V+T+G G  G LGH 
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRSQKI--VYICCGEDHTAALTKEGGVFTFGAGGYGQLGHN 277

Query: 359 DEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLG 408
               +  P  +  L   +  Q+ C R+  +  +  +G +Y FG  G G LG
Sbjct: 278 STSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 84/274 (30%), Positives = 132/274 (48%), Gaps = 10/274 (3%)

Query: 98  QSVEHSSDIVETSAGNM-QITTGRYHTLLISNS-SVFSCGSSLCGVLGH-GPETTQCVSF 154
           +S +    +V   A N+  ++ G  HTL +++   V++ G    G LG  G E  +C+  
Sbjct: 70  KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGSE--ECIRV 127

Query: 155 TR-INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEAL 213
            R I   S   +VQV+    H+  + ++ +VF  G N     G     +    P+L+++L
Sbjct: 128 PRNIKSLSDIQIVQVACGYCHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSL 187

Query: 214 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
            G+P  QV AG   +  LT+ G +   G N  GQLG  D  DR  P  +  L     +V 
Sbjct: 188 LGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRS-QKIVY 246

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           I  G  +  A+T  G V++FG+G    LGH     E+ PR +  F   G  V +++ G +
Sbjct: 247 ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQ 304

Query: 334 HVVA-LDSSGYVYTWGKGYCGALGHGDEIDKTLP 366
           H  A + SSG +Y++G G  G LG G   ++  P
Sbjct: 305 HTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338



 Score = 75.9 bits (185), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 65/206 (31%), Positives = 98/206 (47%), Gaps = 6/206 (2%)

Query: 114 MQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +Q+  G  H+L +S +S VF  G +  G LG G +  +  S   +        +QV+A  
Sbjct: 140 VQVACGYCHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGG 199

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            H+  +  SG +F  G N     G  D N   + P L+++L+      +  G + T  LT
Sbjct: 200 AHSFVLTLSGAIFGWGRNKFGQLGLNDENDR-YVPNLLKSLRSQKIVYICCGEDHTAALT 258

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVV 290
             G V T G+  +GQLGH  T     P+ +   E +GS+V QIA G  +  A V  +G +
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRI 316

Query: 291 YSFGSGSNFCLGHGEQHDELQPRAIQ 316
           YSFG G N  LG G   +   P  ++
Sbjct: 317 YSFGLGGNGQLGTGSTSNRKSPFTVK 342


>gi|444914429|ref|ZP_21234572.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
 gi|444714661|gb|ELW55540.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
          Length = 648

 Score =  128 bits (322), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 109/364 (29%), Positives = 170/364 (46%), Gaps = 19/364 (5%)

Query: 114 MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           + +  G  H+L + ++ +V++ G +  G LG G   T      ++   S   VV  SA  
Sbjct: 150 VAVAAGGNHSLAVRADGTVWAWGDNFAGQLGDGNILTTRWLPKQVQGLSG--VVAASAGW 207

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            H+   L  G V+  G+N+S   G+  +      P  V+ L+GV    V AG  ++  L 
Sbjct: 208 AHSMVALSDGSVWAWGNNTSGQLGNGISVGYGALPEQVQGLRGVMA--VAAGGLYSLALR 265

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
             G +   GSN HGQ G G T+   +   +  L     VV +AAG ++ LAV  +G +++
Sbjct: 266 SDGTLWAWGSNDHGQRGDGSTVYLSSSVRVRWLS---GVVAMAAGSAHSLAVRSDGTLWA 322

Query: 293 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 352
           +G+     LG G + D   P+ +Q   R    VV V+AGD H +AL + G V+TWG  + 
Sbjct: 323 WGANYYGQLGDGTRKDHDTPKRVQGLSR----VVAVAAGDGHSIALCADGTVWTWGYNHD 378

Query: 353 GALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDR 412
           G L HG   D   P PL   +    V V A    +  ++  GSV+ +G+   G LG    
Sbjct: 379 GQLAHGSTNDS--PVPLHVRELSGVVAVAAGALHSLAVLSDGSVWAWGYNRQGQLGDGSL 436

Query: 413 GVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLE 472
             S + +R + L       V+ +S GL H++     G ++ +G N   QLG  T    L 
Sbjct: 437 SSSAEPVRVQGLSG-----VAAVSAGLNHSLARGTDGGVWAWGGNSFGQLGEGTTSNALV 491

Query: 473 PTEI 476
           P  +
Sbjct: 492 PVRV 495



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 104/415 (25%), Positives = 171/415 (41%), Gaps = 64/415 (15%)

Query: 111 AGNMQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS 169
           +G + ++ G  H+L +  + +V++ G +  G LG G   +       +  P  + VV VS
Sbjct: 46  SGVVAVSAGEGHSLALHRDGTVWAWGDNALGQLGDGTSDSHS---EPVRVPGLSGVVAVS 102

Query: 170 ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
           A +NH+  +   G V+  GDN+S   G     +    P  +E L  V    V AG N + 
Sbjct: 103 AGDNHSLALRSDGSVWAWGDNNSDQLGGAPGAQSYSVPWRLEDLSEVVA--VAAGGNHSL 160

Query: 230 FLTIRGHVHTCGSNTHGQLGHGDTL-DRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG 288
            +   G V   G N  GQLG G+ L  R  PK +  L     VV  +AG ++ +    +G
Sbjct: 161 AVRADGTVWAWGDNFAGQLGDGNILTTRWLPKQVQGLS---GVVAASAGWAHSMVALSDG 217

Query: 289 VVYSFGS------GSNFCLGHGEQHDELQP-RAIQTFRRKGIH----------------- 324
            V+++G+      G+   +G+G   +++Q  R +      G++                 
Sbjct: 218 SVWAWGNNTSGQLGNGISVGYGALPEQVQGLRGVMAVAAGGLYSLALRSDGTLWAWGSND 277

Query: 325 -----------------------VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEI 361
                                  VV ++AG  H +A+ S G ++ WG  Y G LG G   
Sbjct: 278 HGQRGDGSTVYLSSSVRVRWLSGVVAMAAGSAHSLAVRSDGTLWAWGANYYGQLGDGTRK 337

Query: 362 DKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRP 421
           D   P+ +  L     V V A    +  L   G+V+ +G+   G L       S   L  
Sbjct: 338 DHDTPKRVQGLSR--VVAVAAGDGHSIALCADGTVWTWGYNHDGQLAHGSTNDSPVPLHV 395

Query: 422 RILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 476
           R L  + A     ++ G  H++ V   G ++ +G N + QLG  +L    EP  +
Sbjct: 396 RELSGVVA-----VAAGALHSLAVLSDGSVWAWGYNRQGQLGDGSLSSSAEPVRV 445



 Score =  101 bits (252), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 103/364 (28%), Positives = 161/364 (44%), Gaps = 39/364 (10%)

Query: 111 AGNMQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSA 162
           +G + +  G  H+L + S+ ++++ G++  G LG G       P+  Q +S         
Sbjct: 299 SGVVAMAAGSAHSLAVRSDGTLWAWGANYYGQLGDGTRKDHDTPKRVQGLS--------- 349

Query: 163 AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTN-RPIFRPRLVEALKGVPCKQV 221
             VV V+A + H+  +   G V+T G N      H  TN  P+  P  V  L GV    V
Sbjct: 350 -RVVAVAAGDGHSIALCADGTVWTWGYNHDGQLAHGSTNDSPV--PLHVRELSGVVA--V 404

Query: 222 TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 281
            AG   +  +   G V   G N  GQLG G       P  +  L     V  ++AG ++ 
Sbjct: 405 AAGALHSLAVLSDGSVWAWGYNRQGQLGDGSLSSSAEPVRVQGLS---GVAAVSAGLNHS 461

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVR-VSAGDEHVVALDS 340
           LA   +G V+++G  S   LG G   + L P      R +G+  V  +SAG  H +A  S
Sbjct: 462 LARGTDGGVWAWGGNSFGQLGEGTTSNALVP-----VRVRGLSGVETISAGFNHSLARAS 516

Query: 341 SGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 400
            G ++ WG  Y G LG G   + ++P  +  L    A  V A    +  +   GSV+ +G
Sbjct: 517 DGGLWAWGGNYTGQLGDGTTSNSSVPVRVQGLSGVAA--VFAGLNHSLAVRTDGSVWAWG 574

Query: 401 WMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERA 460
              FG LG    G ++    P  +  L    +  ++ G  H++ V   G ++ +G+N   
Sbjct: 575 INSFGQLG---EGTTNTSFAPVRVQGLSG--METVAAGSLHSLSVGSDGSMWSWGNNHHG 629

Query: 461 QLGH 464
           QLGH
Sbjct: 630 QLGH 633



 Score = 83.2 bits (204), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 79/263 (30%), Positives = 124/263 (47%), Gaps = 16/263 (6%)

Query: 111 AGNMQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS 169
           +G + +  G  H+L ++S+ SV++ G +  G LG G  ++   S   +     + V  VS
Sbjct: 399 SGVVAVAAGALHSLAVLSDGSVWAWGYNRQGQLGDGSLSS---SAEPVRVQGLSGVAAVS 455

Query: 170 ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
           A  NH+      G V+  G NS    G   T+  +  P  V  L GV  + ++AG N + 
Sbjct: 456 AGLNHSLARGTDGGVWAWGGNSFGQLGEGTTSNALV-PVRVRGLSGV--ETISAGFNHSL 512

Query: 230 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 289
                G +   G N  GQLG G T +   P  +  L  V +V    AG ++ LAV  +G 
Sbjct: 513 ARASDGGLWAWGGNYTGQLGDGTTSNSSVPVRVQGLSGVAAVF---AGLNHSLAVRTDGS 569

Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 349
           V+++G  S   LG G  +    P  +Q     G+  V  +AG  H +++ S G +++WG 
Sbjct: 570 VWAWGINSFGQLGEGTTNTSFAPVRVQGL--SGMETV--AAGSLHSLSVGSDGSMWSWGN 625

Query: 350 GYCGALGHGDEIDKTLPEPLSSL 372
            + G LGHG  +    P P+ SL
Sbjct: 626 NHHGQLGHG--LPGRSPTPVRSL 646



 Score = 72.4 bits (176), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 72/246 (29%), Positives = 107/246 (43%), Gaps = 16/246 (6%)

Query: 221 VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 280
           + AG + +  L   G V   G N  GQLG G +     P  +  L     VV ++AG  +
Sbjct: 1   MAAGTDHSLALRHDGTVWAWGGNALGQLGDGSSDSHSEPVRVRGLS---GVVAVSAGEGH 57

Query: 281 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH-VVRVSAGDEHVVALD 339
            LA+  +G V+++G  +   LG G      +P      R  G+  VV VSAGD H +AL 
Sbjct: 58  SLALHRDGTVWAWGDNALGQLGDGTSDSHSEP-----VRVPGLSGVVAVSAGDNHSLALR 112

Query: 340 SSGYVYTWGKGYCGALGHGDEIDK-TLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYG 398
           S G V+ WG      LG        ++P  L  L     V V A    +  +   G+V+ 
Sbjct: 113 SDGSVWAWGDNNSDQLGGAPGAQSYSVPWRLEDLSE--VVAVAAGGNHSLAVRADGTVWA 170

Query: 399 FGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNE 458
           +G    G LG  D  +      P+ +  L    V   S G  H++V    G ++ +G+N 
Sbjct: 171 WGDNFAGQLG--DGNILTTRWLPKQVQGLSG--VVAASAGWAHSMVALSDGSVWAWGNNT 226

Query: 459 RAQLGH 464
             QLG+
Sbjct: 227 SGQLGN 232


>gi|403273887|ref|XP_003928729.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 3
           [Saimiri boliviensis boliviensis]
          Length = 979

 Score =  128 bits (322), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 90/276 (32%), Positives = 142/276 (51%), Gaps = 10/276 (3%)

Query: 204 IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 263
           +  PR  +       + V  GL  T F+   G V+TCG N  GQLGH  +  R  P+ + 
Sbjct: 22  VLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKS--RKKPEQVV 79

Query: 264 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH-GEQHDELQPRAIQTFRRKG 322
            L+   ++V ++ G ++ LA+   G VY++G  S+  LG  G +     PR I++     
Sbjct: 80  ALD-AQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSL--SD 136

Query: 323 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK-TLPEPLSSLKSHLAVQVC 381
           I +V+V+ G  H +AL  +  V+ WG+   G LG G +  K T P+ + SL     +QV 
Sbjct: 137 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQVA 196

Query: 382 ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYH 441
           A    +FVL  +G+++G+G   FG LG  D   +D+ + P +L SLR+  +  I  G  H
Sbjct: 197 AGGAHSFVLTLSGAIFGWGRNKFGQLGLNDE--NDRYV-PNLLKSLRSQKIVYICCGEDH 253

Query: 442 TVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF 477
           T  +T  G +F FG     QLGH++    + P ++F
Sbjct: 254 TAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVF 289



 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 105/333 (31%), Positives = 153/333 (45%), Gaps = 13/333 (3%)

Query: 135 GSSLCGVLGHGPETTQCVSFTRI-NFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSF 193
           G++  G LG G    + V   R  +F     V  V     H  FVL  G V+TCG N   
Sbjct: 5   GNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLG 64

Query: 194 CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGH-GD 252
             GH  + +   +P  V AL       V+ G   T  L  +G V+  G ++ GQLG  G 
Sbjct: 65  QLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGS 121

Query: 253 TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ-HDELQ 311
                 P++I  L ++  +VQ+A G  + LA++    V+ +G      LG G     +  
Sbjct: 122 EECIRVPRNIKSLSDI-QIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTS 180

Query: 312 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSS 371
           P+ I++    GI  ++V+AG  H   L  SG ++ WG+   G LG  DE D+ +P  L S
Sbjct: 181 PQLIKSLL--GIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKS 238

Query: 372 LKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHH 431
           L+S   V +C  +  T  L   G V+ FG  G+G LG      +   + PR +  L    
Sbjct: 239 LRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG---HNSTSHEINPRKVFELMGSI 295

Query: 432 VSQISTGLYHT-VVVTDRGRLFGFGDNERAQLG 463
           V+QI+ G  HT   V   GR++ FG     QLG
Sbjct: 296 VTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 80/291 (27%), Positives = 138/291 (47%), Gaps = 8/291 (2%)

Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 179
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V VS  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVSCGEAHTLALN 100

Query: 180 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 239
             GQV+  G +S    G   +   I  PR +++L  +   QV  G   +  L+    V  
Sbjct: 101 DKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFC 160

Query: 240 CGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
            G N +GQLG G D   + +P+ I  L  +   +Q+AAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKYGQLGLGTDCKKQTSPQLIKSLLGI-PFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 299 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 358
             LG  +++D   P  +++ R + I  V +  G++H  AL   G V+T+G G  G LGH 
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRSQKI--VYICCGEDHTAALTKEGGVFTFGAGGYGQLGHN 277

Query: 359 DEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLG 408
               +  P  +  L   +  Q+ C R+  +  +  +G +Y FG  G G LG
Sbjct: 278 STSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  102 bits (253), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 84/274 (30%), Positives = 132/274 (48%), Gaps = 10/274 (3%)

Query: 98  QSVEHSSDIVETSAGNM-QITTGRYHTLLISNS-SVFSCGSSLCGVLGH-GPETTQCVSF 154
           +S +    +V   A N+  ++ G  HTL +++   V++ G    G LG  G E  +C+  
Sbjct: 70  KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSE--ECIRV 127

Query: 155 TR-INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEAL 213
            R I   S   +VQV+    H+  + ++ +VF  G N     G     +    P+L+++L
Sbjct: 128 PRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLIKSL 187

Query: 214 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
            G+P  QV AG   +  LT+ G +   G N  GQLG  D  DR  P  +  L     +V 
Sbjct: 188 LGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRS-QKIVY 246

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           I  G  +  A+T  G V++FG+G    LGH     E+ PR +  F   G  V +++ G +
Sbjct: 247 ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQ 304

Query: 334 HVVA-LDSSGYVYTWGKGYCGALGHGDEIDKTLP 366
           H  A + SSG +Y++G G  G LG G   ++  P
Sbjct: 305 HTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338



 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 77/251 (30%), Positives = 119/251 (47%), Gaps = 17/251 (6%)

Query: 70  IYA-GMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLISN 128
           +YA G+  + Q+ LL       +  +R  ++++  SDI       +Q+  G YH+L +S 
Sbjct: 105 VYAWGLDSDGQLGLLGS-----EECIRVPRNIKSLSDI-----QIVQVACGYYHSLALSK 154

Query: 129 SS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTC 187
           +S VF  G +  G LG G +  +  S   I        +QV+A   H+  +  SG +F  
Sbjct: 155 ASEVFCWGQNKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGW 214

Query: 188 GDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQ 247
           G N     G  D N   + P L+++L+      +  G + T  LT  G V T G+  +GQ
Sbjct: 215 GRNKFGQLGLNDENDR-YVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQ 273

Query: 248 LGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVVYSFGSGSNFCLGHGE 305
           LGH  T     P+ +   E +GS+V QIA G  +  A V  +G +YSFG G N  LG G 
Sbjct: 274 LGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGS 331

Query: 306 QHDELQPRAIQ 316
             +   P  ++
Sbjct: 332 TSNRKSPFTVK 342


>gi|431895932|gb|ELK05350.1| Putative E3 ubiquitin-protein ligase HERC1 [Pteropus alecto]
          Length = 4850

 Score =  128 bits (322), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 103/339 (30%), Positives = 167/339 (49%), Gaps = 17/339 (5%)

Query: 115  QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQV---SA 170
            Q+  G+  T +I +N +V +CG    G LG G      V  T I+      V Q+     
Sbjct: 4020 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHV-LTVISALQGFVVTQLVTSCG 4078

Query: 171  SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
            S+ H+  + +SG+VF+ GD      GH +++R   RPR +EAL+G    Q++ G   +  
Sbjct: 4079 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQMSCGFKHSAV 4137

Query: 231  LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSVVQIAAGPSYMLAVTGNG 288
            +T  G + T G+  +G+LG G+T ++  P+ +  LE  ++G   Q+A G ++ LAV+ +G
Sbjct: 4138 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIG---QVACGLNHTLAVSADG 4194

Query: 289  -VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 347
             +V++FG G    LG G    +  P+ +      GI + +V+ G +  VAL   G+VYT+
Sbjct: 4195 SMVWAFGDGDYGKLGLGNSTAKSSPQKVDVL--CGIGIKKVACGTQFSVALTKDGHVYTF 4252

Query: 348  GKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSL 407
            G+     L  G   +   P+ +  L   +   V      T  L  TG VY +G    G L
Sbjct: 4253 GQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQL 4312

Query: 408  GFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT 446
            G    G ++ V  P ++  L+  +V QIS G  H+   T
Sbjct: 4313 GL---GHTNHVREPTLVTVLQGKNVRQISAGRCHSAAWT 4348



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 91/315 (28%), Positives = 144/315 (45%), Gaps = 25/315 (7%)

Query: 160 PSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTN------RPIFRPRLVEAL 213
           PS +    + A +     +   G V  CG  S    G  D+N      +  F P    ++
Sbjct: 400 PSFSDAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPH--RSI 457

Query: 214 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
           K V   + + G   T   T  G V + G   +G+LGHG++  +  PK I    +   VV 
Sbjct: 458 KKVSSSKGSDG--HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVC 515

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           ++AG  +  AVT +G +Y++G G    LGHG+ +     R I T  +   +V  VS G  
Sbjct: 516 VSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNS----RNIPTLVKDISNVGEVSCGSS 571

Query: 334 HVVALDSSGY-VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVD 392
           H +AL   G  V+++G G  G LGHGD      P+ + +L+     +VCA  + +  L  
Sbjct: 572 HTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTS 631

Query: 393 TGSVYGFG---WMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRG 449
           TG VY +G    +G GS            LRP++++ L A  +  IS G  H + ++   
Sbjct: 632 TGQVYAWGCGACLGCGS-------SEATALRPKLIEELAATRIVDISIGDSHCLALSHDN 684

Query: 450 RLFGFGDNERAQLGH 464
            ++ +G+N   Q G 
Sbjct: 685 EVYAWGNNSMGQCGQ 699



 Score = 98.6 bits (244), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 92/267 (34%), Positives = 130/267 (48%), Gaps = 16/267 (5%)

Query: 122 HTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ-VSASENHAAFVL 179
           HTL   +   VFS G    G LGHG  +TQ      I  P    VV  VSA   H+A V 
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYP-KLIQGPLQGKVVVCVSAGYRHSAAVT 527

Query: 180 QSGQVFTCGDNSSFCCGHRDTN-RPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH-V 237
           + G+++T G+      GH D+N R I  P LV+ +  V   +V+ G + T  L+  G  V
Sbjct: 528 EDGELYTWGEGDFGRLGHGDSNSRNI--PTLVKDISNV--GEVSCGSSHTIALSKDGRTV 583

Query: 238 HTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 297
            + G   +G+LGHGDT     PK I  L+ +  + ++ AG    LA+T  G VY++G G+
Sbjct: 584 WSFGGGDNGKLGHGDTNRVYKPKVIEALQGM-FIRKVCAGSQSSLALTSTGQVYAWGCGA 642

Query: 298 NFCLGHG-EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 356
             CLG G  +   L+P+ I+        +V +S GD H +AL     VY WG    G  G
Sbjct: 643 --CLGCGSSEATALRPKLIEEL--AATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCG 698

Query: 357 HGDEIDK-TLPEPLSSLKSHLAVQVCA 382
            G+     T P+ +S L      Q+ A
Sbjct: 699 QGNSTGPITKPKKVSGLDGIAIQQISA 725



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 87/324 (26%), Positives = 150/324 (46%), Gaps = 13/324 (4%)

Query: 160  PSAAHVVQVSASENHAAFVLQS-GQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPC 218
            PS +   QV   +N   FV+Q+ G V  CG+ S    G  +++  +    ++ AL+G   
Sbjct: 4013 PSFSQAQQVICGQN-CTFVIQANGTVLACGEGSYGRLGQGNSDD-LHVLTVISALQGFVV 4070

Query: 219  KQVTAGLNFTGF---LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA 275
             Q+       G    LT  G V + G   +G+LGHG++  +  P+ I  L+    VVQ++
Sbjct: 4071 TQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQG-EEVVQMS 4129

Query: 276  AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHV 335
             G  +   VT +G +++FG+G    LG G   ++  P  +     +G  + +V+ G  H 
Sbjct: 4130 CGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTAL--EGYQIGQVACGLNHT 4187

Query: 336  VALDSSG-YVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 394
            +A+ + G  V+ +G G  G LG G+   K+ P+ +  L      +V    + +  L   G
Sbjct: 4188 LAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDG 4247

Query: 395  SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 454
             VY FG      +G P+ G +    RP+ +  L    +  ++ G  HT+ +   G ++ +
Sbjct: 4248 HVYTFGQDRL--IGLPE-GRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAW 4304

Query: 455  GDNERAQLGHDTLRGCLEPTEIFI 478
            G N   QLG        EPT + +
Sbjct: 4305 GSNSEGQLGLGHTNHVREPTLVTV 4328



 Score = 84.7 bits (208), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 68/230 (29%), Positives = 108/230 (46%), Gaps = 11/230 (4%)

Query: 237  VHTCGSNTHGQLGH-GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 295
            V+  G+  HGQL   G  +  P   + AP        Q+  G +    +  NG V + G 
Sbjct: 3988 VYLWGAGRHGQLAEAGRNVMVP---AAAP--SFSQAQQVICGQNCTFVIQANGTVLACGE 4042

Query: 296  GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG-DEHVVALDSSGYVYTWGKGYCGA 354
            GS   LG G   D      I   +   +  +  S G D H +AL  SG V++WG G  G 
Sbjct: 4043 GSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGK 4102

Query: 355  LGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGV 414
            LGHG+   +  P  + +L+    VQ+    + + V+   G ++ FG   +G LG  +   
Sbjct: 4103 LGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN--T 4160

Query: 415  SDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRL-FGFGDNERAQLG 463
            S+K L P  + +L  + + Q++ GL HT+ V+  G + + FGD +  +LG
Sbjct: 4161 SNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLG 4209



 Score = 60.1 bits (144), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 49/180 (27%), Positives = 82/180 (45%), Gaps = 13/180 (7%)

Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 349
           VY +GS S+  L  G Q   LQP+   +F         + AG      + + G V   GK
Sbjct: 374 VYVWGSNSSHQLVEGTQEKILQPKLAPSFS----DAQTIEAGQYCTFVISTDGSVRACGK 429

Query: 350 GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKR----KTFVLVDTGSVYGFGWMGFG 405
           G  G LG GD  +++  + L + + H +++  +  +     T      G V+ +G   +G
Sbjct: 430 GSYGRLGLGDSNNQSTLKKL-TFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYG 488

Query: 406 SLGFPDRGVSDKVLRPRILD-SLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 464
            LG    G S     P+++   L+   V  +S G  H+  VT+ G L+ +G+ +  +LGH
Sbjct: 489 KLG---HGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGH 545



 Score = 49.3 bits (116), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 41/143 (28%), Positives = 67/143 (46%), Gaps = 9/143 (6%)

Query: 344  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 403
            VY WG G  G L    E  + +  P ++     A QV   +  TFV+   G+V   G   
Sbjct: 3988 VYLWGAGRHGQLA---EAGRNVMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGS 4044

Query: 404  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLY---HTVVVTDRGRLFGFGDNERA 460
            +G LG   +G SD +    ++ +L+   V+Q+ T      H++ +T+ G +F +GD +  
Sbjct: 4045 YGRLG---QGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYG 4101

Query: 461  QLGHDTLRGCLEPTEIFIQEMEE 483
            +LGH        P +I   + EE
Sbjct: 4102 KLGHGNSDRQRRPRQIEALQGEE 4124



 Score = 48.9 bits (115), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 28/100 (28%), Positives = 48/100 (48%), Gaps = 2/100 (2%)

Query: 125 LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQV 184
           L S   V++ G   C  LG G      +    I   +A  +V +S  ++H   +    +V
Sbjct: 629 LTSTGQVYAWGCGAC--LGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEV 686

Query: 185 FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           +  G+NS   CG  ++  PI +P+ V  L G+  +Q++AG
Sbjct: 687 YAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAG 726


>gi|297296624|ref|XP_002804832.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Macaca
            mulatta]
          Length = 4824

 Score =  128 bits (322), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 103/339 (30%), Positives = 166/339 (48%), Gaps = 17/339 (5%)

Query: 115  QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQV---SA 170
            Q+  G+  T +I +N +V +CG    G LG G      V  T I+      V Q+     
Sbjct: 3994 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHV-LTVISALQGFVVTQLVTSCG 4052

Query: 171  SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
            S+ H+  + +SG+VF+ GD      GH +++R   RPR +EAL+G    Q++ G   +  
Sbjct: 4053 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQMSCGFKHSAV 4111

Query: 231  LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSVVQIAAGPSYMLAVTGNG 288
            +T  G + T G+  +G+LG G+T ++  P+ +  LE  ++G   Q+A G ++ LAV+ +G
Sbjct: 4112 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIG---QVACGLNHTLAVSADG 4168

Query: 289  -VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 347
             +V++FG G    LG G    +  P+ I      GI + +V+ G +  VAL   G+VYT+
Sbjct: 4169 SMVWAFGDGDYGKLGLGNSTAKSSPQKIDVL--CGIGIKKVACGTQFSVALTKDGHVYTF 4226

Query: 348  GKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSL 407
            G+     L  G   +   P+ +  L   +   V      T  L   G VY +G    G L
Sbjct: 4227 GQDRLIGLPEGRARNHNRPQQIPVLAGMIIEDVAVGAEHTLALASNGDVYAWGSNSEGQL 4286

Query: 408  GFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT 446
            G    G ++ V  P ++  L+  +V QIS G  H+   T
Sbjct: 4287 GL---GHTNHVREPTLVTGLQGKNVRQISAGRCHSAAWT 4322



 Score =  109 bits (273), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 90/315 (28%), Positives = 144/315 (45%), Gaps = 25/315 (7%)

Query: 160 PSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTN------RPIFRPRLVEAL 213
           PS +    + A +     +   G V  CG  S    G  D+N      +  F P    ++
Sbjct: 400 PSFSDAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPH--RSI 457

Query: 214 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
           K V   + + G   T   T  G V + G   +G+LGHG++  +  PK I    +   VV 
Sbjct: 458 KKVSSSKGSDG--HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVC 515

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           ++AG  +  AVT +G +Y++G G    LGHG+ +     R I T  +   +V  VS G  
Sbjct: 516 VSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNS----RNIPTLVKDISNVGEVSCGSS 571

Query: 334 HVVALDSSGY-VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVD 392
           H +AL   G  V+++G G  G LGHGD      P+ + +L+     +VCA  + +  L  
Sbjct: 572 HTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTS 631

Query: 393 TGSVYGFG---WMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRG 449
           TG VY +G    +G GS            LRP++++ L A  +  +S G  H + ++   
Sbjct: 632 TGQVYAWGCGACLGCGS-------SEATALRPKLIEELAATRIVDVSIGDSHCLALSHDN 684

Query: 450 RLFGFGDNERAQLGH 464
            ++ +G+N   Q G 
Sbjct: 685 EVYAWGNNSMGQCGQ 699



 Score = 98.6 bits (244), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 91/266 (34%), Positives = 128/266 (48%), Gaps = 14/266 (5%)

Query: 122 HTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
           HTL   +   VFS G    G LGHG  +TQ              VV VSA   H+A V +
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528

Query: 181 SGQVFTCGDNSSFCCGHRDTN-RPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH-VH 238
            G+++T G+      GH D+N R I  P LV+ +  V   +V+ G + T  L+  G  V 
Sbjct: 529 DGELYTWGEGDFGRLGHGDSNSRNI--PTLVKDISNV--GEVSCGSSHTIALSKDGRTVW 584

Query: 239 TCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
           + G   +G+LGHGDT     PK I  L+ +  + ++ AG    LA+T  G VY++G G+ 
Sbjct: 585 SFGGGDNGKLGHGDTNRVYKPKVIEALQGM-FIRKVCAGSQSSLALTSTGQVYAWGCGA- 642

Query: 299 FCLGHG-EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 357
            CLG G  +   L+P+ I+        +V VS GD H +AL     VY WG    G  G 
Sbjct: 643 -CLGCGSSEATALRPKLIEEL--AATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQ 699

Query: 358 GDEIDK-TLPEPLSSLKSHLAVQVCA 382
           G+     T P+ +S L      Q+ A
Sbjct: 700 GNSTGPITKPKKVSGLDGIAIQQISA 725



 Score = 98.2 bits (243), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 87/320 (27%), Positives = 148/320 (46%), Gaps = 13/320 (4%)

Query: 160  PSAAHVVQVSASENHAAFVLQS-GQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPC 218
            PS +   QV   +N   FV+Q+ G V  CG+ S    G  +++  +    ++ AL+G   
Sbjct: 3987 PSFSQAQQVICGQN-CTFVIQANGTVLACGEGSYGRLGQGNSDD-LHVLTVISALQGFVV 4044

Query: 219  KQVTAGLNFTGF---LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA 275
             Q+       G    LT  G V + G   +G+LGHG++  +  P+ I  L+    VVQ++
Sbjct: 4045 TQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQG-EEVVQMS 4103

Query: 276  AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHV 335
             G  +   VT +G +++FG+G    LG G   ++  P  +     +G  + +V+ G  H 
Sbjct: 4104 CGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTAL--EGYQIGQVACGLNHT 4161

Query: 336  VALDSSG-YVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 394
            +A+ + G  V+ +G G  G LG G+   K+ P+ +  L      +V    + +  L   G
Sbjct: 4162 LAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDG 4221

Query: 395  SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 454
             VY FG      +G P+ G +    RP+ +  L    +  ++ G  HT+ +   G ++ +
Sbjct: 4222 HVYTFGQDRL--IGLPE-GRARNHNRPQQIPVLAGMIIEDVAVGAEHTLALASNGDVYAW 4278

Query: 455  GDNERAQLGHDTLRGCLEPT 474
            G N   QLG        EPT
Sbjct: 4279 GSNSEGQLGLGHTNHVREPT 4298



 Score = 84.7 bits (208), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 68/230 (29%), Positives = 108/230 (46%), Gaps = 11/230 (4%)

Query: 237  VHTCGSNTHGQLGH-GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 295
            V+  G+  HGQL   G  +  P   + AP        Q+  G +    +  NG V + G 
Sbjct: 3962 VYLWGAGRHGQLAEAGRNVMVP---AAAP--SFSQAQQVICGQNCTFVIQANGTVLACGE 4016

Query: 296  GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG-DEHVVALDSSGYVYTWGKGYCGA 354
            GS   LG G   D      I   +   +  +  S G D H +AL  SG V++WG G  G 
Sbjct: 4017 GSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGK 4076

Query: 355  LGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGV 414
            LGHG+   +  P  + +L+    VQ+    + + V+   G ++ FG   +G LG  +   
Sbjct: 4077 LGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN--T 4134

Query: 415  SDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRL-FGFGDNERAQLG 463
            S+K L P  + +L  + + Q++ GL HT+ V+  G + + FGD +  +LG
Sbjct: 4135 SNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLG 4183



 Score = 59.7 bits (143), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 49/180 (27%), Positives = 82/180 (45%), Gaps = 13/180 (7%)

Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 349
           VY +GS S+  L  G Q   LQP+   +F         + AG      + + G V   GK
Sbjct: 374 VYVWGSNSSHQLVEGTQEKILQPKLAPSFS----DAQTIEAGQYCTFVISTDGSVRACGK 429

Query: 350 GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKR----KTFVLVDTGSVYGFGWMGFG 405
           G  G LG GD  +++  + L + + H +++  +  +     T      G V+ +G   +G
Sbjct: 430 GSYGRLGLGDSNNQSTLKKL-TFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYG 488

Query: 406 SLGFPDRGVSDKVLRPRILD-SLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 464
            LG    G S     P+++   L+   V  +S G  H+  VT+ G L+ +G+ +  +LGH
Sbjct: 489 KLG---HGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGH 545



 Score = 49.3 bits (116), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 29/100 (29%), Positives = 48/100 (48%), Gaps = 2/100 (2%)

Query: 125 LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQV 184
           L S   V++ G   C  LG G      +    I   +A  +V VS  ++H   +    +V
Sbjct: 629 LTSTGQVYAWGCGAC--LGCGSSEATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEV 686

Query: 185 FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           +  G+NS   CG  ++  PI +P+ V  L G+  +Q++AG
Sbjct: 687 YAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAG 726



 Score = 48.9 bits (115), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 41/143 (28%), Positives = 67/143 (46%), Gaps = 9/143 (6%)

Query: 344  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 403
            VY WG G  G L    E  + +  P ++     A QV   +  TFV+   G+V   G   
Sbjct: 3962 VYLWGAGRHGQLA---EAGRNVMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGS 4018

Query: 404  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLY---HTVVVTDRGRLFGFGDNERA 460
            +G LG   +G SD +    ++ +L+   V+Q+ T      H++ +T+ G +F +GD +  
Sbjct: 4019 YGRLG---QGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYG 4075

Query: 461  QLGHDTLRGCLEPTEIFIQEMEE 483
            +LGH        P +I   + EE
Sbjct: 4076 KLGHGNSDRQRRPRQIEALQGEE 4098


>gi|344284964|ref|XP_003414234.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 [Loxodonta
           africana]
          Length = 1018

 Score =  128 bits (322), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 89/255 (34%), Positives = 128/255 (50%), Gaps = 3/255 (1%)

Query: 211 EALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS 270
           EA  G   +Q  +G   +  L   G VH CG N+ GQLG      R  P  I  LE + +
Sbjct: 16  EAAGGAELRQAASGERHSLLLLSDGTVHACGDNSCGQLGRRGVPHRKRPGLIQALETL-N 74

Query: 271 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 330
           V  ++ G  + LAV   G V+++G+GS   LG GE   EL    ++     GI +++VS 
Sbjct: 75  VDLLSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGE-FKELNFTPMKVKALAGIKIIQVSC 133

Query: 331 GDEHVVALDSSGYVYTWGKGYCGALGHGDE-IDKTLPEPLSSLKSHLAVQVCARKRKTFV 389
           G  H +AL   G V++WG    G LG G E + +  P+ + SL+     QV A    +F 
Sbjct: 134 GHYHSLALSQDGQVFSWGNNSHGQLGLGKEFLSQESPQRVKSLEGIPLAQVAAGGAHSFA 193

Query: 390 LVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRG 449
           L  +G+ +G+G    G L      V  +  +PR + +L+   V  IS G  HT V+T  G
Sbjct: 194 LSLSGTSFGWGSNNAGQLALSGNNVPVQSYKPRSIGALKELGVVYISCGSEHTAVLTQDG 253

Query: 450 RLFGFGDNERAQLGH 464
           ++F FGDN   QLGH
Sbjct: 254 KVFTFGDNSSGQLGH 268



 Score =  101 bits (252), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 88/300 (29%), Positives = 138/300 (46%), Gaps = 27/300 (9%)

Query: 115 QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHVV 166
           Q  +G  H+LL+ S+ +V +CG + CG LG         P   Q +    ++        
Sbjct: 25  QAASGERHSLLLLSDGTVHACGDNSCGQLGRRGVPHRKRPGLIQALETLNVDL------- 77

Query: 167 QVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN 226
            +S  + H+  V   G+VF  G  S    G  +     F P  V+AL G+   QV+ G  
Sbjct: 78  -LSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKELNFTPMKVKALAGIKIIQVSCGHY 136

Query: 227 FTGFLTIRGHVHTCGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 285
            +  L+  G V + G+N+HGQLG G + L + +P+ +  LE +  + Q+AAG ++  A++
Sbjct: 137 HSLALSQDGQVFSWGNNSHGQLGLGKEFLSQESPQRVKSLEGI-PLAQVAAGGAHSFALS 195

Query: 286 GNGVVYSFGSGSNFC-----LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 340
            +G   SFG GSN        G+       +PR+I   +  G  VV +S G EH   L  
Sbjct: 196 LSGT--SFGWGSNNAGQLALSGNNVPVQSYKPRSIGALKELG--VVYISCGSEHTAVLTQ 251

Query: 341 SGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 400
            G V+T+G    G LGHG   +K  P+ +  +   ++   C        +  T  V  FG
Sbjct: 252 DGKVFTFGDNSSGQLGHGPTAEKRGPQLVEGIDGLVSQIDCGSYHTLVYVYTTRQVISFG 311



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 84/287 (29%), Positives = 142/287 (49%), Gaps = 13/287 (4%)

Query: 163 AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 222
           A + Q ++ E H+  +L  G V  CGDNS    G R       RP L++AL+ +    ++
Sbjct: 21  AELRQAASGERHSLLLLSDGTVHACGDNSCGQLGRRGVPHRK-RPGLIQALETLNVDLLS 79

Query: 223 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLD-RPTPKSIAPLEEVGSVVQIAAGPSYM 281
            G   +  +  +G V   G+ + GQLG G+  +   TP  +  L  +  ++Q++ G  + 
Sbjct: 80  CGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKELNFTPMKVKALAGI-KIIQVSCGHYHS 138

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQH-DELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 340
           LA++ +G V+S+G+ S+  LG G++   +  P+ +++   +GI + +V+AG  H  AL  
Sbjct: 139 LALSQDGQVFSWGNNSHGQLGLGKEFLSQESPQRVKSL--EGIPLAQVAAGGAHSFALSL 196

Query: 341 SGYVYTWGKGYCGAL---GHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVY 397
           SG  + WG    G L   G+   +    P  + +LK    V +      T VL   G V+
Sbjct: 197 SGTSFGWGSNNAGQLALSGNNVPVQSYKPRSIGALKELGVVYISCGSEHTAVLTQDGKVF 256

Query: 398 GFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV 444
            FG    G LG    G + +   P++++ +    VSQI  G YHT+V
Sbjct: 257 TFGDNSSGQLG---HGPTAEKRGPQLVEGIDG-LVSQIDCGSYHTLV 299



 Score = 77.4 bits (189), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 78/283 (27%), Positives = 126/283 (44%), Gaps = 25/283 (8%)

Query: 114 MQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +Q++ G YH+L +S +  VFS G++  G LG G E     S  R+       + QV+A  
Sbjct: 129 IQVSCGHYHSLALSQDGQVFSWGNNSHGQLGLGKEFLSQESPQRVKSLEGIPLAQVAAGG 188

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPI--FRPRLVEALKGVPCKQVTAGLNFTGF 230
            H+  +  SG  F  G N++        N P+  ++PR + ALK +    ++ G   T  
Sbjct: 189 AHSFALSLSGTSFGWGSNNAGQLALSGNNVPVQSYKPRSIGALKELGVVYISCGSEHTAV 248

Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 290
           LT  G V T G N+ GQLGHG T ++  P+ +  ++  G V QI  G  + L       V
Sbjct: 249 LTQDGKVFTFGDNSSGQLGHGPTAEKRGPQLVEGID--GLVSQIDCGSYHTL-------V 299

Query: 291 YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGD------EHVVALDSSGYV 344
           Y + +      G G        R+    +   +  + +SA D      +H+ A   + +V
Sbjct: 300 YVYTTRQVISFGRGPSDTTSSTRSDALTKNSDVSCL-ISADDLVNVQVKHIFAGTYANFV 358

Query: 345 YTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKT 387
            T+      ++       KTLPE +S +   L  +  A +R T
Sbjct: 359 TTYQDATSTSVSR-----KTLPE-ISRINQPLIKKWIAVERST 395


>gi|327277954|ref|XP_003223728.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
           2 [Anolis carolinensis]
          Length = 1060

 Score =  128 bits (322), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 104/311 (33%), Positives = 146/311 (46%), Gaps = 12/311 (3%)

Query: 156 RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 215
           R NF     V  V     H  FVL  G V+TCG N     GH  + +   RP  V AL  
Sbjct: 27  RCNFFLNKTVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRK---RPEQVGALDA 83

Query: 216 VPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRP-TPKSIAPLEEVGSVVQI 274
                V+ G   T  L  +G V+  G    GQLG   T +    P++I  L +V  +VQ+
Sbjct: 84  QNIVAVSCGEAHTLTLNDKGQVYAWGFAADGQLGLPGTEEYTRVPRNIKSLSDV-QIVQV 142

Query: 275 AAGPSYMLAVTGNGVVYSFGSGSNFCLGHG-EQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           A G  + LA++    V+S+G   +  LG G +   +  P+ I++    GI   +++AG  
Sbjct: 143 ACGYYHSLALSKGSEVFSWGQNKHGQLGLGYDLKKQTSPQLIKSLL--GIPFGQIAAGGA 200

Query: 334 HVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDT 393
           H  AL  SG V+ WG+   G LG  DE D+ +P  L SL+S   V +   +  T  L   
Sbjct: 201 HSFALTLSGAVFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYISCGEDHTAALTKE 260

Query: 394 GSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHT-VVVTDRGRLF 452
           G V+ FG  G+G LG    G     + PR +  L  + V+QI+ G  HT   V   GR++
Sbjct: 261 GGVFTFGAGGYGQLGHNSTG---HEINPRKVFELMGNIVTQIACGRQHTSAFVPSTGRIY 317

Query: 453 GFGDNERAQLG 463
            FG     QLG
Sbjct: 318 SFGLGGNGQLG 328



 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 87/276 (31%), Positives = 140/276 (50%), Gaps = 10/276 (3%)

Query: 204 IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 263
           +  PR          + V  GL  T F+   G V+TCG N  GQLGH  +  R  P+ + 
Sbjct: 22  VLEPRRCNFFLNKTVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKS--RKRPEQVG 79

Query: 264 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLG-HGEQHDELQPRAIQTFRRKG 322
            L+   ++V ++ G ++ L +   G VY++G  ++  LG  G +     PR I++     
Sbjct: 80  ALD-AQNIVAVSCGEAHTLTLNDKGQVYAWGFAADGQLGLPGTEEYTRVPRNIKSL--SD 136

Query: 323 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK-TLPEPLSSLKSHLAVQVC 381
           + +V+V+ G  H +AL     V++WG+   G LG G ++ K T P+ + SL      Q+ 
Sbjct: 137 VQIVQVACGYYHSLALSKGSEVFSWGQNKHGQLGLGYDLKKQTSPQLIKSLLGIPFGQIA 196

Query: 382 ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYH 441
           A    +F L  +G+V+G+G   FG LG  D   +D+ + P +L SLR+  +  IS G  H
Sbjct: 197 AGGAHSFALTLSGAVFGWGRNKFGQLGLNDE--NDRYV-PNLLKSLRSQKIVYISCGEDH 253

Query: 442 TVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF 477
           T  +T  G +F FG     QLGH++    + P ++F
Sbjct: 254 TAALTKEGGVFTFGAGGYGQLGHNSTGHEINPRKVF 289



 Score =  115 bits (287), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 87/291 (29%), Positives = 139/291 (47%), Gaps = 8/291 (2%)

Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 179
           R+   ++ + +V++CG +  G LGH     +     ++    A ++V VS  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKRP---EQVGALDAQNIVAVSCGEAHTLTLN 100

Query: 180 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 239
             GQV+  G  +    G   T      PR +++L  V   QV  G   +  L+    V +
Sbjct: 101 DKGQVYAWGFAADGQLGLPGTEEYTRVPRNIKSLSDVQIVQVACGYYHSLALSKGSEVFS 160

Query: 240 CGSNTHGQLGHGDTLDRPT-PKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
            G N HGQLG G  L + T P+ I  L  +    QIAAG ++  A+T +G V+ +G    
Sbjct: 161 WGQNKHGQLGLGYDLKKQTSPQLIKSLLGI-PFGQIAAGGAHSFALTLSGAVFGWGRNKF 219

Query: 299 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 358
             LG  +++D   P  +++ R + I  V +S G++H  AL   G V+T+G G  G LGH 
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRSQKI--VYISCGEDHTAALTKEGGVFTFGAGGYGQLGHN 277

Query: 359 DEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLG 408
               +  P  +  L  ++  Q+ C R+  +  +  TG +Y FG  G G LG
Sbjct: 278 STGHEINPRKVFELMGNIVTQIACGRQHTSAFVPSTGRIYSFGLGGNGQLG 328



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 79/258 (30%), Positives = 126/258 (48%), Gaps = 7/258 (2%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSASEN 173
           ++ G  HTL +++   V++ G +  G LG  P T +     R I   S   +VQV+    
Sbjct: 89  VSCGEAHTLTLNDKGQVYAWGFAADGQLGL-PGTEEYTRVPRNIKSLSDVQIVQVACGYY 147

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
           H+  + +  +VF+ G N     G     +    P+L+++L G+P  Q+ AG   +  LT+
Sbjct: 148 HSLALSKGSEVFSWGQNKHGQLGLGYDLKKQTSPQLIKSLLGIPFGQIAAGGAHSFALTL 207

Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
            G V   G N  GQLG  D  DR  P  +  L     +V I+ G  +  A+T  G V++F
Sbjct: 208 SGAVFGWGRNKFGQLGLNDENDRYVPNLLKSLRS-QKIVYISCGEDHTAALTKEGGVFTF 266

Query: 294 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA-LDSSGYVYTWGKGYC 352
           G+G    LGH     E+ PR +  F   G  V +++ G +H  A + S+G +Y++G G  
Sbjct: 267 GAGGYGQLGHNSTGHEINPRKV--FELMGNIVTQIACGRQHTSAFVPSTGRIYSFGLGGN 324

Query: 353 GALGHGDEIDKTLPEPLS 370
           G LG G   ++  P P+ 
Sbjct: 325 GQLGMGSTSNRKSPFPVK 342



 Score = 78.6 bits (192), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 67/206 (32%), Positives = 98/206 (47%), Gaps = 6/206 (2%)

Query: 114 MQITTGRYHTLLISN-SSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +Q+  G YH+L +S  S VFS G +  G LG G +  +  S   I         Q++A  
Sbjct: 140 VQVACGYYHSLALSKGSEVFSWGQNKHGQLGLGYDLKKQTSPQLIKSLLGIPFGQIAAGG 199

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            H+  +  SG VF  G N     G  D N   + P L+++L+      ++ G + T  LT
Sbjct: 200 AHSFALTLSGAVFGWGRNKFGQLGLNDENDR-YVPNLLKSLRSQKIVYISCGEDHTAALT 258

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVV 290
             G V T G+  +GQLGH  T     P+ +   E +G++V QIA G  +  A V   G +
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTGHEINPRKV--FELMGNIVTQIACGRQHTSAFVPSTGRI 316

Query: 291 YSFGSGSNFCLGHGEQHDELQPRAIQ 316
           YSFG G N  LG G   +   P  ++
Sbjct: 317 YSFGLGGNGQLGMGSTSNRKSPFPVK 342


>gi|403273885|ref|XP_003928728.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
           [Saimiri boliviensis boliviensis]
          Length = 1057

 Score =  128 bits (322), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 90/276 (32%), Positives = 142/276 (51%), Gaps = 10/276 (3%)

Query: 204 IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 263
           +  PR  +       + V  GL  T F+   G V+TCG N  GQLGH  +  R  P+ + 
Sbjct: 22  VLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKS--RKKPEQVV 79

Query: 264 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH-GEQHDELQPRAIQTFRRKG 322
            L+   ++V ++ G ++ LA+   G VY++G  S+  LG  G +     PR I++     
Sbjct: 80  ALD-AQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSL--SD 136

Query: 323 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK-TLPEPLSSLKSHLAVQVC 381
           I +V+V+ G  H +AL  +  V+ WG+   G LG G +  K T P+ + SL     +QV 
Sbjct: 137 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQVA 196

Query: 382 ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYH 441
           A    +FVL  +G+++G+G   FG LG  D   +D+ + P +L SLR+  +  I  G  H
Sbjct: 197 AGGAHSFVLTLSGAIFGWGRNKFGQLGLNDE--NDRYV-PNLLKSLRSQKIVYICCGEDH 253

Query: 442 TVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF 477
           T  +T  G +F FG     QLGH++    + P ++F
Sbjct: 254 TAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVF 289



 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 105/333 (31%), Positives = 153/333 (45%), Gaps = 13/333 (3%)

Query: 135 GSSLCGVLGHGPETTQCVSFTRI-NFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSF 193
           G++  G LG G    + V   R  +F     V  V     H  FVL  G V+TCG N   
Sbjct: 5   GNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLG 64

Query: 194 CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGH-GD 252
             GH  + +   +P  V AL       V+ G   T  L  +G V+  G ++ GQLG  G 
Sbjct: 65  QLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGS 121

Query: 253 TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ-HDELQ 311
                 P++I  L ++  +VQ+A G  + LA++    V+ +G      LG G     +  
Sbjct: 122 EECIRVPRNIKSLSDI-QIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTS 180

Query: 312 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSS 371
           P+ I++    GI  ++V+AG  H   L  SG ++ WG+   G LG  DE D+ +P  L S
Sbjct: 181 PQLIKSLL--GIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKS 238

Query: 372 LKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHH 431
           L+S   V +C  +  T  L   G V+ FG  G+G LG      +   + PR +  L    
Sbjct: 239 LRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG---HNSTSHEINPRKVFELMGSI 295

Query: 432 VSQISTGLYHT-VVVTDRGRLFGFGDNERAQLG 463
           V+QI+ G  HT   V   GR++ FG     QLG
Sbjct: 296 VTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 80/291 (27%), Positives = 138/291 (47%), Gaps = 8/291 (2%)

Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 179
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V VS  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVSCGEAHTLALN 100

Query: 180 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 239
             GQV+  G +S    G   +   I  PR +++L  +   QV  G   +  L+    V  
Sbjct: 101 DKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFC 160

Query: 240 CGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
            G N +GQLG G D   + +P+ I  L  +   +Q+AAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKYGQLGLGTDCKKQTSPQLIKSLLGI-PFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 299 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 358
             LG  +++D   P  +++ R + I  V +  G++H  AL   G V+T+G G  G LGH 
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRSQKI--VYICCGEDHTAALTKEGGVFTFGAGGYGQLGHN 277

Query: 359 DEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLG 408
               +  P  +  L   +  Q+ C R+  +  +  +G +Y FG  G G LG
Sbjct: 278 STSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  101 bits (252), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 84/274 (30%), Positives = 132/274 (48%), Gaps = 10/274 (3%)

Query: 98  QSVEHSSDIVETSAGNM-QITTGRYHTLLISNS-SVFSCGSSLCGVLGH-GPETTQCVSF 154
           +S +    +V   A N+  ++ G  HTL +++   V++ G    G LG  G E  +C+  
Sbjct: 70  KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSE--ECIRV 127

Query: 155 TR-INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEAL 213
            R I   S   +VQV+    H+  + ++ +VF  G N     G     +    P+L+++L
Sbjct: 128 PRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLIKSL 187

Query: 214 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
            G+P  QV AG   +  LT+ G +   G N  GQLG  D  DR  P  +  L     +V 
Sbjct: 188 LGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRS-QKIVY 246

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           I  G  +  A+T  G V++FG+G    LGH     E+ PR +  F   G  V +++ G +
Sbjct: 247 ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQ 304

Query: 334 HVVA-LDSSGYVYTWGKGYCGALGHGDEIDKTLP 366
           H  A + SSG +Y++G G  G LG G   ++  P
Sbjct: 305 HTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338



 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 77/251 (30%), Positives = 119/251 (47%), Gaps = 17/251 (6%)

Query: 70  IYA-GMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLISN 128
           +YA G+  + Q+ LL       +  +R  ++++  SDI       +Q+  G YH+L +S 
Sbjct: 105 VYAWGLDSDGQLGLLGS-----EECIRVPRNIKSLSDI-----QIVQVACGYYHSLALSK 154

Query: 129 SS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTC 187
           +S VF  G +  G LG G +  +  S   I        +QV+A   H+  +  SG +F  
Sbjct: 155 ASEVFCWGQNKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGW 214

Query: 188 GDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQ 247
           G N     G  D N   + P L+++L+      +  G + T  LT  G V T G+  +GQ
Sbjct: 215 GRNKFGQLGLNDENDR-YVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQ 273

Query: 248 LGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVVYSFGSGSNFCLGHGE 305
           LGH  T     P+ +   E +GS+V QIA G  +  A V  +G +YSFG G N  LG G 
Sbjct: 274 LGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGS 331

Query: 306 QHDELQPRAIQ 316
             +   P  ++
Sbjct: 332 TSNRKSPFTVK 342


>gi|355692784|gb|EHH27387.1| hypothetical protein EGK_17574 [Macaca mulatta]
          Length = 4862

 Score =  128 bits (322), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 102/339 (30%), Positives = 166/339 (48%), Gaps = 17/339 (5%)

Query: 115  QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQV---SA 170
            Q+  G+  T +I +N +V +CG    G LG G      V  T I+      V Q+     
Sbjct: 4031 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHV-LTVISALQGFVVTQLVTSCG 4089

Query: 171  SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
            S+ H+  + +SG+VF+ GD      GH +++R   RPR +EAL+G    Q++ G   +  
Sbjct: 4090 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQMSCGFKHSAV 4148

Query: 231  LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSVVQIAAGPSYMLAVTGNG 288
            +T  G + T G+  +G+LG G+T ++  P+ +  LE  ++G   Q+A G ++ LAV+ +G
Sbjct: 4149 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIG---QVACGLNHTLAVSADG 4205

Query: 289  -VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 347
             +V++FG G    LG G    +  P+ I      GI + +V+ G +  VAL   G+VYT+
Sbjct: 4206 SMVWAFGDGDYGKLGLGNSTAKSSPQKIDVL--CGIGIKKVACGTQFSVALTKDGHVYTF 4263

Query: 348  GKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSL 407
            G+     L  G   +   P+ +  L   +   V      T  L   G VY +G    G L
Sbjct: 4264 GQDRLIGLPEGRARNHNRPQQIPVLAGMIIEDVAVGAEHTLALASNGDVYAWGSNSEGQL 4323

Query: 408  GFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT 446
            G    G ++ V  P ++  L+  ++ QIS G  H+   T
Sbjct: 4324 GL---GHTNHVREPTLVTGLQGKNIRQISAGRCHSAAWT 4359



 Score =  109 bits (273), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 90/315 (28%), Positives = 144/315 (45%), Gaps = 25/315 (7%)

Query: 160 PSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTN------RPIFRPRLVEAL 213
           PS +    + A +     +   G V  CG  S    G  D+N      +  F P    ++
Sbjct: 400 PSFSDAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPH--RSI 457

Query: 214 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
           K V   + + G   T   T  G V + G   +G+LGHG++  +  PK I    +   VV 
Sbjct: 458 KKVSSSKGSDG--HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVC 515

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           ++AG  +  AVT +G +Y++G G    LGHG+ +     R I T  +   +V  VS G  
Sbjct: 516 VSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNS----RNIPTLVKDISNVGEVSCGSS 571

Query: 334 HVVALDSSGY-VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVD 392
           H +AL   G  V+++G G  G LGHGD      P+ + +L+     +VCA  + +  L  
Sbjct: 572 HTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTS 631

Query: 393 TGSVYGFG---WMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRG 449
           TG VY +G    +G GS            LRP++++ L A  +  +S G  H + ++   
Sbjct: 632 TGQVYAWGCGACLGCGS-------SEATALRPKLIEELAATRIVDVSIGDSHCLALSHDN 684

Query: 450 RLFGFGDNERAQLGH 464
            ++ +G+N   Q G 
Sbjct: 685 EVYAWGNNSMGQCGQ 699



 Score = 99.0 bits (245), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 93/267 (34%), Positives = 130/267 (48%), Gaps = 16/267 (5%)

Query: 122 HTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ-VSASENHAAFVL 179
           HTL   +   VFS G    G LGHG  +TQ      I  P    VV  VSA   H+A V 
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYP-KLIQGPLQGKVVVCVSAGYRHSAAVT 527

Query: 180 QSGQVFTCGDNSSFCCGHRDTN-RPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH-V 237
           + G+++T G+      GH D+N R I  P LV+ +  V   +V+ G + T  L+  G  V
Sbjct: 528 EDGELYTWGEGDFGRLGHGDSNSRNI--PTLVKDISNV--GEVSCGSSHTIALSKDGRTV 583

Query: 238 HTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 297
            + G   +G+LGHGDT     PK I  L+ +  + ++ AG    LA+T  G VY++G G+
Sbjct: 584 WSFGGGDNGKLGHGDTNRVYKPKVIEALQGM-FIRKVCAGSQSSLALTSTGQVYAWGCGA 642

Query: 298 NFCLGHG-EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 356
             CLG G  +   L+P+ I+        +V VS GD H +AL     VY WG    G  G
Sbjct: 643 --CLGCGSSEATALRPKLIEEL--AATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCG 698

Query: 357 HGDEIDK-TLPEPLSSLKSHLAVQVCA 382
            G+     T P+ +S L      Q+ A
Sbjct: 699 QGNSTGPITKPKKVSGLDGIAIQQISA 725



 Score = 98.2 bits (243), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 87/320 (27%), Positives = 148/320 (46%), Gaps = 13/320 (4%)

Query: 160  PSAAHVVQVSASENHAAFVLQS-GQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPC 218
            PS +   QV   +N   FV+Q+ G V  CG+ S    G  +++  +    ++ AL+G   
Sbjct: 4024 PSFSQAQQVICGQN-CTFVIQANGTVLACGEGSYGRLGQGNSDD-LHVLTVISALQGFVV 4081

Query: 219  KQVTAGLNFTGF---LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA 275
             Q+       G    LT  G V + G   +G+LGHG++  +  P+ I  L+    VVQ++
Sbjct: 4082 TQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQG-EEVVQMS 4140

Query: 276  AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHV 335
             G  +   VT +G +++FG+G    LG G   ++  P  +     +G  + +V+ G  H 
Sbjct: 4141 CGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTAL--EGYQIGQVACGLNHT 4198

Query: 336  VALDSSG-YVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 394
            +A+ + G  V+ +G G  G LG G+   K+ P+ +  L      +V    + +  L   G
Sbjct: 4199 LAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDG 4258

Query: 395  SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 454
             VY FG      +G P+ G +    RP+ +  L    +  ++ G  HT+ +   G ++ +
Sbjct: 4259 HVYTFGQDRL--IGLPE-GRARNHNRPQQIPVLAGMIIEDVAVGAEHTLALASNGDVYAW 4315

Query: 455  GDNERAQLGHDTLRGCLEPT 474
            G N   QLG        EPT
Sbjct: 4316 GSNSEGQLGLGHTNHVREPT 4335



 Score = 84.7 bits (208), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 68/230 (29%), Positives = 108/230 (46%), Gaps = 11/230 (4%)

Query: 237  VHTCGSNTHGQLGH-GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 295
            V+  G+  HGQL   G  +  P   + AP        Q+  G +    +  NG V + G 
Sbjct: 3999 VYLWGAGRHGQLAEAGRNVMVP---AAAP--SFSQAQQVICGQNCTFVIQANGTVLACGE 4053

Query: 296  GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG-DEHVVALDSSGYVYTWGKGYCGA 354
            GS   LG G   D      I   +   +  +  S G D H +AL  SG V++WG G  G 
Sbjct: 4054 GSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGK 4113

Query: 355  LGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGV 414
            LGHG+   +  P  + +L+    VQ+    + + V+   G ++ FG   +G LG  +   
Sbjct: 4114 LGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN--T 4171

Query: 415  SDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRL-FGFGDNERAQLG 463
            S+K L P  + +L  + + Q++ GL HT+ V+  G + + FGD +  +LG
Sbjct: 4172 SNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLG 4220



 Score = 60.1 bits (144), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 49/180 (27%), Positives = 82/180 (45%), Gaps = 13/180 (7%)

Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 349
           VY +GS S+  L  G Q   LQP+   +F         + AG      + + G V   GK
Sbjct: 374 VYVWGSNSSHQLVEGTQEKILQPKLAPSFS----DAQTIEAGQYCTFVISTDGSVRACGK 429

Query: 350 GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKR----KTFVLVDTGSVYGFGWMGFG 405
           G  G LG GD  +++  + L + + H +++  +  +     T      G V+ +G   +G
Sbjct: 430 GSYGRLGLGDSNNQSTLKKL-TFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYG 488

Query: 406 SLGFPDRGVSDKVLRPRILD-SLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 464
            LG    G S     P+++   L+   V  +S G  H+  VT+ G L+ +G+ +  +LGH
Sbjct: 489 KLG---HGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGH 545



 Score = 49.3 bits (116), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 29/100 (29%), Positives = 48/100 (48%), Gaps = 2/100 (2%)

Query: 125 LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQV 184
           L S   V++ G   C  LG G      +    I   +A  +V VS  ++H   +    +V
Sbjct: 629 LTSTGQVYAWGCGAC--LGCGSSEATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEV 686

Query: 185 FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           +  G+NS   CG  ++  PI +P+ V  L G+  +Q++AG
Sbjct: 687 YAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAG 726



 Score = 49.3 bits (116), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 41/143 (28%), Positives = 67/143 (46%), Gaps = 9/143 (6%)

Query: 344  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 403
            VY WG G  G L    E  + +  P ++     A QV   +  TFV+   G+V   G   
Sbjct: 3999 VYLWGAGRHGQLA---EAGRNVMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGS 4055

Query: 404  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLY---HTVVVTDRGRLFGFGDNERA 460
            +G LG   +G SD +    ++ +L+   V+Q+ T      H++ +T+ G +F +GD +  
Sbjct: 4056 YGRLG---QGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYG 4112

Query: 461  QLGHDTLRGCLEPTEIFIQEMEE 483
            +LGH        P +I   + EE
Sbjct: 4113 KLGHGNSDRQRRPRQIEALQGEE 4135


>gi|52353612|gb|AAU44178.1| ptative chromosome condensation factor [Oryza sativa Japonica
           Group]
          Length = 917

 Score =  128 bits (321), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 100/325 (30%), Positives = 148/325 (45%), Gaps = 19/325 (5%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V  V     HAA V ++G VFT G++S    GH  T      PRLVE+L       V  G
Sbjct: 79  VYHVDCGVRHAALVTRNGDVFTWGEDSGGRLGH-GTREDSVHPRLVESLAACNVDFVACG 137

Query: 225 LNFTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 282
              T  +T  G ++T G  TH  G LGHG       PK I+   +   V  ++ G  +  
Sbjct: 138 EFHTCAVTTTGELYTWGDGTHNVGLLGHGTDAGHWIPKRISGALDGLPVAYVSCGTWHTA 197

Query: 283 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD--- 339
            +T  G +++FG GS   LGHG       P+ +++    G+  + V+ G  H  A+    
Sbjct: 198 LITSMGQLFTFGDGSFGVLGHGNLTSISCPKEVESL--SGLKTIAVACGVWHTAAIVEVI 255

Query: 340 --------SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 391
                   S+G ++TWG G    LGHGD+  +  P  ++SL  +   +V      T  L 
Sbjct: 256 VTHSSSSVSAGKLFTWGDGDKHRLGHGDKESRLKPTCVASLIDYDFYRVACGHSLTVCLT 315

Query: 392 DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRL 451
            +G V   G   +G LG P+   SD  L   + D +   HV Q++ G YH  V+T R  +
Sbjct: 316 TSGKVLSMGNSVYGQLGNPN---SDGRLPCLVEDRIAGEHVLQVACGSYHVAVLTGRSEV 372

Query: 452 FGFGDNERAQLGHDTLRGCLEPTEI 476
           F +G     +LGH  +     PT++
Sbjct: 373 FTWGKGANGRLGHGDIEDRKVPTQV 397



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 81/272 (29%), Positives = 120/272 (44%), Gaps = 18/272 (6%)

Query: 116 ITTGRYHTLLISNSS---VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +  G +HT  ++ +     +  G+   G+LGHG +    +            V  VS   
Sbjct: 134 VACGEFHTCAVTTTGELYTWGDGTHNVGLLGHGTDAGHWIPKRISGALDGLPVAYVSCGT 193

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            H A +   GQ+FT GD S    GH +    I  P+ VE+L G+    V  G+  T  + 
Sbjct: 194 WHTALITSMGQLFTFGDGSFGVLGHGNLT-SISCPKEVESLSGLKTIAVACGVWHTAAIV 252

Query: 233 -----------IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 281
                        G + T G     +LGHGD   R  P  +A L +     ++A G S  
Sbjct: 253 EVIVTHSSSSVSAGKLFTWGDGDKHRLGHGDKESRLKPTCVASLIDY-DFYRVACGHSLT 311

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 341
           + +T +G V S G+     LG+      L P  ++  R  G HV++V+ G  HV  L   
Sbjct: 312 VCLTTSGKVLSMGNSVYGQLGNPNSDGRL-PCLVED-RIAGEHVLQVACGSYHVAVLTGR 369

Query: 342 GYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
             V+TWGKG  G LGHGD  D+ +P  + +LK
Sbjct: 370 SEVFTWGKGANGRLGHGDIEDRKVPTQVEALK 401



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 72/243 (29%), Positives = 115/243 (47%), Gaps = 25/243 (10%)

Query: 252 DTLDRPTPKS----IAPLEE--VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGE 305
           DT+ R T K+      PLE   V  V  +  G  +   VT NG V+++G  S   LGHG 
Sbjct: 54  DTIIRSTEKTDFLLPKPLESRLVLDVYHVDCGVRHAALVTRNGDVFTWGEDSGGRLGHGT 113

Query: 306 QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY--CGALGHGDEIDK 363
           + D + PR +++      +V  V+ G+ H  A+ ++G +YTWG G    G LGHG +   
Sbjct: 114 REDSVHPRLVESL--AACNVDFVACGEFHTCAVTTTGELYTWGDGTHNVGLLGHGTDAGH 171

Query: 364 TLPEPLSSLKSHLAVQ-VCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPR 422
            +P+ +S     L V  V      T ++   G ++ FG   FG LG    G    +  P+
Sbjct: 172 WIPKRISGALDGLPVAYVSCGTWHTALITSMGQLFTFGDGSFGVLGH---GNLTSISCPK 228

Query: 423 ILDSLRAHHVSQISTGLYHTVVVTD-----------RGRLFGFGDNERAQLGHDTLRGCL 471
            ++SL       ++ G++HT  + +            G+LF +GD ++ +LGH      L
Sbjct: 229 EVESLSGLKTIAVACGVWHTAAIVEVIVTHSSSSVSAGKLFTWGDGDKHRLGHGDKESRL 288

Query: 472 EPT 474
           +PT
Sbjct: 289 KPT 291



 Score = 82.0 bits (201), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 78/288 (27%), Positives = 129/288 (44%), Gaps = 19/288 (6%)

Query: 198 RDTNRPIFR-PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDR 256
           R T +  F  P+ +E+   +    V  G+     +T  G V T G ++ G+LGHG   D 
Sbjct: 58  RSTEKTDFLLPKPLESRLVLDVYHVDCGVRHAALVTRNGDVFTWGEDSGGRLGHGTREDS 117

Query: 257 PTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC--LGHGEQHDELQPRA 314
             P+ +  L    +V  +A G  +  AVT  G +Y++G G++    LGHG       P+ 
Sbjct: 118 VHPRLVESLAAC-NVDFVACGEFHTCAVTTTGELYTWGDGTHNVGLLGHGTDAGHWIPKR 176

Query: 315 IQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKS 374
           I +    G+ V  VS G  H   + S G ++T+G G  G LGHG+    + P+ + SL  
Sbjct: 177 I-SGALDGLPVAYVSCGTWHTALITSMGQLFTFGDGSFGVLGHGNLTSISCPKEVESLSG 235

Query: 375 HLAVQVCARKRKTFVLVD-----------TGSVYGFGWMGFGSLGFPDRGVSDKVLRPRI 423
              + V      T  +V+            G ++ +G      LG  D+   +  L+P  
Sbjct: 236 LKTIAVACGVWHTAAIVEVIVTHSSSSVSAGKLFTWGDGDKHRLGHGDK---ESRLKPTC 292

Query: 424 LDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCL 471
           + SL  +   +++ G   TV +T  G++   G++   QLG+    G L
Sbjct: 293 VASLIDYDFYRVACGHSLTVCLTTSGKVLSMGNSVYGQLGNPNSDGRL 340



 Score = 73.2 bits (178), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 60/221 (27%), Positives = 108/221 (48%), Gaps = 17/221 (7%)

Query: 116 ITTGRYHTLLISN-SSVFSCGSSLCGVLGHG-------PETTQCVSFTRI-----NFPSA 162
           ++ G +HT LI++   +F+ G    GVLGHG       P+  + +S  +           
Sbjct: 189 VSCGTWHTALITSMGQLFTFGDGSFGVLGHGNLTSISCPKEVESLSGLKTIAVACGVWHT 248

Query: 163 AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 222
           A +V+V  +  H++  + +G++FT GD      GH D    + +P  V +L      +V 
Sbjct: 249 AAIVEVIVT--HSSSSVSAGKLFTWGDGDKHRLGHGDKESRL-KPTCVASLIDYDFYRVA 305

Query: 223 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 282
            G + T  LT  G V + G++ +GQLG+ ++ D   P  +        V+Q+A G  ++ 
Sbjct: 306 CGHSLTVCLTTSGKVLSMGNSVYGQLGNPNS-DGRLPCLVEDRIAGEHVLQVACGSYHVA 364

Query: 283 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGI 323
            +TG   V+++G G+N  LGHG+  D   P  ++  + + +
Sbjct: 365 VLTGRSEVFTWGKGANGRLGHGDIEDRKVPTQVEALKDRAV 405



 Score = 55.8 bits (133), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 45/149 (30%), Positives = 67/149 (44%), Gaps = 14/149 (9%)

Query: 339 DSSGYVYTWGKGYC---------GALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFV 389
           DS G VY WG+ +C           +   ++ D  LP+PL S        V    R   +
Sbjct: 32  DSLGDVYVWGEVFCENSVRVGSDTIIRSTEKTDFLLPKPLESRLVLDVYHVDCGVRHAAL 91

Query: 390 LVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRG 449
           +   G V+ +G    G LG    G  +  + PR+++SL A +V  ++ G +HT  VT  G
Sbjct: 92  VTRNGDVFTWGEDSGGRLGH---GTREDSVHPRLVESLAACNVDFVACGEFHTCAVTTTG 148

Query: 450 RLFGFGD--NERAQLGHDTLRGCLEPTEI 476
            L+ +GD  +    LGH T  G   P  I
Sbjct: 149 ELYTWGDGTHNVGLLGHGTDAGHWIPKRI 177


>gi|403298208|ref|XP_003939923.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Saimiri
            boliviensis boliviensis]
          Length = 4860

 Score =  128 bits (321), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 103/339 (30%), Positives = 166/339 (48%), Gaps = 17/339 (5%)

Query: 115  QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQV---SA 170
            Q+  G+  T +I +N +V +CG    G LG G      V  T I+      V Q+     
Sbjct: 4030 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHV-LTVISALQGFVVTQLVTSCG 4088

Query: 171  SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
            S+ H+  + +SG+VF+ GD      GH +++R   RPR +EAL+G    Q++ G   +  
Sbjct: 4089 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQMSCGFKHSAV 4147

Query: 231  LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSVVQIAAGPSYMLAVTGNG 288
            +T  G + T G+  +G+LG G+T ++  P+ +  LE  ++G   Q+A G ++ LAV+ +G
Sbjct: 4148 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIG---QVACGLNHTLAVSADG 4204

Query: 289  -VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 347
             VV++FG G    LG G    +  P+ +      GI + +V+ G +  VAL   G+VYT+
Sbjct: 4205 SVVWAFGDGDYGKLGLGNSTAKSSPQKVDVL--CGIGIKKVACGTQFSVALTKDGHVYTF 4262

Query: 348  GKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSL 407
            G+     L  G   +   P+ +  L   +   V      T  L   G VY +G    G L
Sbjct: 4263 GQDRLIGLPEGRARNHNRPQQIPVLAGVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQL 4322

Query: 408  GFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT 446
            G    G ++ V  P ++  L+  +V QIS G  H+   T
Sbjct: 4323 GL---GHTNHVREPTLVTGLQGKNVRQISAGRCHSAAWT 4358



 Score =  109 bits (273), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 90/315 (28%), Positives = 144/315 (45%), Gaps = 25/315 (7%)

Query: 160 PSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTN------RPIFRPRLVEAL 213
           PS +    + A +     +   G V  CG  S    G  D+N      +  F P    ++
Sbjct: 400 PSFSDAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPH--RSI 457

Query: 214 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
           K V   + + G   T   T  G V + G   +G+LGHG++  +  PK I    +   VV 
Sbjct: 458 KKVSSSKGSDG--HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVC 515

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           ++AG  +  AVT +G +Y++G G    LGHG+ +     R I T  +   +V  VS G  
Sbjct: 516 VSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNS----RNIPTLVKDISNVGEVSCGSS 571

Query: 334 HVVALDSSGY-VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVD 392
           H +AL   G  V+++G G  G LGHGD      P+ + +L+     +VCA  + +  L  
Sbjct: 572 HTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTS 631

Query: 393 TGSVYGFG---WMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRG 449
           TG VY +G    +G GS            LRP++++ L A  +  +S G  H + ++   
Sbjct: 632 TGQVYAWGCGACLGCGS-------SEATALRPKLIEELAATRIVDVSIGDSHCLALSHDN 684

Query: 450 RLFGFGDNERAQLGH 464
            ++ +G+N   Q G 
Sbjct: 685 EVYAWGNNSMGQCGQ 699



 Score = 99.0 bits (245), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 91/266 (34%), Positives = 128/266 (48%), Gaps = 14/266 (5%)

Query: 122 HTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
           HTL   +   VFS G    G LGHG  +TQ              VV VSA   H+A V +
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528

Query: 181 SGQVFTCGDNSSFCCGHRDTN-RPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH-VH 238
            G+++T G+      GH D+N R I  P LV+ +  V   +V+ G + T  L+  G  V 
Sbjct: 529 DGELYTWGEGDFGRLGHGDSNSRNI--PTLVKDISNV--GEVSCGSSHTIALSKDGRTVW 584

Query: 239 TCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
           + G   +G+LGHGDT     PK I  L+ +  + ++ AG    LA+T  G VY++G G+ 
Sbjct: 585 SFGGGDNGKLGHGDTNRVYKPKVIEALQGM-FIRKVCAGSQSSLALTSTGQVYAWGCGA- 642

Query: 299 FCLGHG-EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 357
            CLG G  +   L+P+ I+        +V VS GD H +AL     VY WG    G  G 
Sbjct: 643 -CLGCGSSEATALRPKLIEEL--AATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQ 699

Query: 358 GDEIDK-TLPEPLSSLKSHLAVQVCA 382
           G+     T P+ +S L      Q+ A
Sbjct: 700 GNSTGPITKPKKVSGLDGIAIQQISA 725



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 87/320 (27%), Positives = 148/320 (46%), Gaps = 13/320 (4%)

Query: 160  PSAAHVVQVSASENHAAFVLQS-GQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPC 218
            PS +   QV   +N   FV+Q+ G V  CG+ S    G  +++  +    ++ AL+G   
Sbjct: 4023 PSFSQAQQVICGQN-CTFVIQANGTVLACGEGSYGRLGQGNSDD-LHVLTVISALQGFVV 4080

Query: 219  KQVTAGLNFTGF---LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA 275
             Q+       G    LT  G V + G   +G+LGHG++  +  P+ I  L+    VVQ++
Sbjct: 4081 TQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQG-EEVVQMS 4139

Query: 276  AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHV 335
             G  +   VT +G +++FG+G    LG G   ++  P  +     +G  + +V+ G  H 
Sbjct: 4140 CGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTAL--EGYQIGQVACGLNHT 4197

Query: 336  VALDSSG-YVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 394
            +A+ + G  V+ +G G  G LG G+   K+ P+ +  L      +V    + +  L   G
Sbjct: 4198 LAVSADGSVVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDG 4257

Query: 395  SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 454
             VY FG      +G P+ G +    RP+ +  L    +  ++ G  HT+ +   G ++ +
Sbjct: 4258 HVYTFGQDRL--IGLPE-GRARNHNRPQQIPVLAGVIIEDVAVGAEHTLALASNGDVYAW 4314

Query: 455  GDNERAQLGHDTLRGCLEPT 474
            G N   QLG        EPT
Sbjct: 4315 GSNSEGQLGLGHTNHVREPT 4334



 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 68/230 (29%), Positives = 108/230 (46%), Gaps = 11/230 (4%)

Query: 237  VHTCGSNTHGQLGH-GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 295
            V+  G+  HGQL   G  +  P   + AP        Q+  G +    +  NG V + G 
Sbjct: 3998 VYLWGAGRHGQLAEAGRNVMVP---AAAP--SFSQAQQVICGQNCTFVIQANGTVLACGE 4052

Query: 296  GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG-DEHVVALDSSGYVYTWGKGYCGA 354
            GS   LG G   D      I   +   +  +  S G D H +AL  SG V++WG G  G 
Sbjct: 4053 GSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGK 4112

Query: 355  LGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGV 414
            LGHG+   +  P  + +L+    VQ+    + + V+   G ++ FG   +G LG  +   
Sbjct: 4113 LGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN--T 4170

Query: 415  SDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGR-LFGFGDNERAQLG 463
            S+K L P  + +L  + + Q++ GL HT+ V+  G  ++ FGD +  +LG
Sbjct: 4171 SNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSVVWAFGDGDYGKLG 4219



 Score = 60.1 bits (144), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 49/180 (27%), Positives = 82/180 (45%), Gaps = 13/180 (7%)

Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 349
           VY +GS S+  L  G Q   LQP+   +F         + AG      + + G V   GK
Sbjct: 374 VYVWGSNSSHQLVEGTQEKILQPKLAPSFS----DAQTIEAGQYCTFVISTDGSVRACGK 429

Query: 350 GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKR----KTFVLVDTGSVYGFGWMGFG 405
           G  G LG GD  +++  + L + + H +++  +  +     T      G V+ +G   +G
Sbjct: 430 GSYGRLGLGDSNNQSTLKKL-TFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYG 488

Query: 406 SLGFPDRGVSDKVLRPRILD-SLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 464
            LG    G S     P+++   L+   V  +S G  H+  VT+ G L+ +G+ +  +LGH
Sbjct: 489 KLG---HGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGH 545



 Score = 49.3 bits (116), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 29/100 (29%), Positives = 48/100 (48%), Gaps = 2/100 (2%)

Query: 125 LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQV 184
           L S   V++ G   C  LG G      +    I   +A  +V VS  ++H   +    +V
Sbjct: 629 LTSTGQVYAWGCGAC--LGCGSSEATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEV 686

Query: 185 FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           +  G+NS   CG  ++  PI +P+ V  L G+  +Q++AG
Sbjct: 687 YAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAG 726



 Score = 49.3 bits (116), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 41/143 (28%), Positives = 67/143 (46%), Gaps = 9/143 (6%)

Query: 344  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 403
            VY WG G  G L    E  + +  P ++     A QV   +  TFV+   G+V   G   
Sbjct: 3998 VYLWGAGRHGQLA---EAGRNVMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGS 4054

Query: 404  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLY---HTVVVTDRGRLFGFGDNERA 460
            +G LG   +G SD +    ++ +L+   V+Q+ T      H++ +T+ G +F +GD +  
Sbjct: 4055 YGRLG---QGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYG 4111

Query: 461  QLGHDTLRGCLEPTEIFIQEMEE 483
            +LGH        P +I   + EE
Sbjct: 4112 KLGHGNSDRQRRPRQIEALQGEE 4134


>gi|427780149|gb|JAA55526.1| Putative hect e3 ubiquitin ligase culex quinquefasciatus hect e3
           ubiquitin ligase [Rhipicephalus pulchellus]
          Length = 1175

 Score =  128 bits (321), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 103/316 (32%), Positives = 147/316 (46%), Gaps = 13/316 (4%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V +V+    H   +L +G V++CG N     G    +R + +   V AL     + V  G
Sbjct: 87  VREVACGHKHTLVLLANGSVYSCGANDF---GQLGQDRSMRKLEQVAALSAHEIRAVACG 143

Query: 225 LNFTGFLTIRGHVHTCGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
              +  L+  G V + G N +GQLG G +   R  PK I  L  +  +VQIA G  + LA
Sbjct: 144 EAHSLALSDAGQVFSWGCNRNGQLGCGTEEESRLRPKVIKKLATL-HIVQIACGAVHCLA 202

Query: 284 VTGNGVVYSFGSGSNFCLGHGEQH--DELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 341
           +  NG ++S+G  ++  LG G     +E  PR +      G+ +  V+ G  H V L  S
Sbjct: 203 LANNGELFSWGGNASGQLGLGRDSTGNERLPRRVSHL--VGVPLALVACGAMHSVGLTPS 260

Query: 342 GYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGW 401
           G V+ WG+  CG LG  D+ D+  P  L  L+S     VC  +  T  L   G V+ FG 
Sbjct: 261 GTVFVWGRNSCGQLGLSDQRDRLHPTVLKPLRSQRIKHVCCGENHTAALTADGGVFTFGA 320

Query: 402 MGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDR-GRLFGFGDNERA 460
             +G LG    GV      PR +  L    +SQ+S G  HTV    + GRL+ FG     
Sbjct: 321 GTYGQLG---HGVKVNEAVPRRVVELMGTAISQLSCGRCHTVAYAPQSGRLYIFGLGMSG 377

Query: 461 QLGHDTLRGCLEPTEI 476
           QLG+ TL     P  +
Sbjct: 378 QLGNGTLESSALPVTV 393



 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 83/254 (32%), Positives = 123/254 (48%), Gaps = 6/254 (2%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           +  G  H+L +S++  VFS G +  G LG G E    +    I   +  H+VQ++    H
Sbjct: 140 VACGEAHSLALSDAGQVFSWGCNRNGQLGCGTEEESRLRPKVIKKLATLHIVQIACGAVH 199

Query: 175 AAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
              +  +G++F+ G N+S   G  RD+      PR V  L GVP   V  G   +  LT 
Sbjct: 200 CLALANNGELFSWGGNASGQLGLGRDSTGNERLPRRVSHLVGVPLALVACGAMHSVGLTP 259

Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
            G V   G N+ GQLG  D  DR  P  + PL     +  +  G ++  A+T +G V++F
Sbjct: 260 SGTVFVWGRNSCGQLGLSDQRDRLHPTVLKPLRS-QRIKHVCCGENHTAALTADGGVFTF 318

Query: 294 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL-DSSGYVYTWGKGYC 352
           G+G+   LGHG + +E  PR +      G  + ++S G  H VA    SG +Y +G G  
Sbjct: 319 GAGTYGQLGHGVKVNEAVPRRVVELM--GTAISQLSCGRCHTVAYAPQSGRLYIFGLGMS 376

Query: 353 GALGHGDEIDKTLP 366
           G LG+G      LP
Sbjct: 377 GQLGNGTLESSALP 390


>gi|403273883|ref|XP_003928727.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
           [Saimiri boliviensis boliviensis]
          Length = 1049

 Score =  128 bits (321), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 90/276 (32%), Positives = 142/276 (51%), Gaps = 10/276 (3%)

Query: 204 IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 263
           +  PR  +       + V  GL  T F+   G V+TCG N  GQLGH  +  R  P+ + 
Sbjct: 22  VLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKS--RKKPEQVV 79

Query: 264 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH-GEQHDELQPRAIQTFRRKG 322
            L+   ++V ++ G ++ LA+   G VY++G  S+  LG  G +     PR I++     
Sbjct: 80  ALD-AQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSL--SD 136

Query: 323 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK-TLPEPLSSLKSHLAVQVC 381
           I +V+V+ G  H +AL  +  V+ WG+   G LG G +  K T P+ + SL     +QV 
Sbjct: 137 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQVA 196

Query: 382 ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYH 441
           A    +FVL  +G+++G+G   FG LG  D   +D+ + P +L SLR+  +  I  G  H
Sbjct: 197 AGGAHSFVLTLSGAIFGWGRNKFGQLGLNDE--NDRYV-PNLLKSLRSQKIVYICCGEDH 253

Query: 442 TVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF 477
           T  +T  G +F FG     QLGH++    + P ++F
Sbjct: 254 TAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVF 289



 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 105/333 (31%), Positives = 153/333 (45%), Gaps = 13/333 (3%)

Query: 135 GSSLCGVLGHGPETTQCVSFTRI-NFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSF 193
           G++  G LG G    + V   R  +F     V  V     H  FVL  G V+TCG N   
Sbjct: 5   GNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLG 64

Query: 194 CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGH-GD 252
             GH  + +   +P  V AL       V+ G   T  L  +G V+  G ++ GQLG  G 
Sbjct: 65  QLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGS 121

Query: 253 TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ-HDELQ 311
                 P++I  L ++  +VQ+A G  + LA++    V+ +G      LG G     +  
Sbjct: 122 EECIRVPRNIKSLSDI-QIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTS 180

Query: 312 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSS 371
           P+ I++    GI  ++V+AG  H   L  SG ++ WG+   G LG  DE D+ +P  L S
Sbjct: 181 PQLIKSLL--GIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKS 238

Query: 372 LKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHH 431
           L+S   V +C  +  T  L   G V+ FG  G+G LG      +   + PR +  L    
Sbjct: 239 LRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG---HNSTSHEINPRKVFELMGSI 295

Query: 432 VSQISTGLYHT-VVVTDRGRLFGFGDNERAQLG 463
           V+QI+ G  HT   V   GR++ FG     QLG
Sbjct: 296 VTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 80/291 (27%), Positives = 138/291 (47%), Gaps = 8/291 (2%)

Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 179
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V VS  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVSCGEAHTLALN 100

Query: 180 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 239
             GQV+  G +S    G   +   I  PR +++L  +   QV  G   +  L+    V  
Sbjct: 101 DKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFC 160

Query: 240 CGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
            G N +GQLG G D   + +P+ I  L  +   +Q+AAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKYGQLGLGTDCKKQTSPQLIKSLLGI-PFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 299 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 358
             LG  +++D   P  +++ R + I  V +  G++H  AL   G V+T+G G  G LGH 
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRSQKI--VYICCGEDHTAALTKEGGVFTFGAGGYGQLGHN 277

Query: 359 DEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLG 408
               +  P  +  L   +  Q+ C R+  +  +  +G +Y FG  G G LG
Sbjct: 278 STSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  101 bits (252), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 84/274 (30%), Positives = 132/274 (48%), Gaps = 10/274 (3%)

Query: 98  QSVEHSSDIVETSAGNM-QITTGRYHTLLISNS-SVFSCGSSLCGVLGH-GPETTQCVSF 154
           +S +    +V   A N+  ++ G  HTL +++   V++ G    G LG  G E  +C+  
Sbjct: 70  KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSE--ECIRV 127

Query: 155 TR-INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEAL 213
            R I   S   +VQV+    H+  + ++ +VF  G N     G     +    P+L+++L
Sbjct: 128 PRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLIKSL 187

Query: 214 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
            G+P  QV AG   +  LT+ G +   G N  GQLG  D  DR  P  +  L     +V 
Sbjct: 188 LGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRS-QKIVY 246

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           I  G  +  A+T  G V++FG+G    LGH     E+ PR +  F   G  V +++ G +
Sbjct: 247 ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQ 304

Query: 334 HVVA-LDSSGYVYTWGKGYCGALGHGDEIDKTLP 366
           H  A + SSG +Y++G G  G LG G   ++  P
Sbjct: 305 HTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338



 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 77/251 (30%), Positives = 119/251 (47%), Gaps = 17/251 (6%)

Query: 70  IYA-GMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLISN 128
           +YA G+  + Q+ LL       +  +R  ++++  SDI       +Q+  G YH+L +S 
Sbjct: 105 VYAWGLDSDGQLGLLGS-----EECIRVPRNIKSLSDI-----QIVQVACGYYHSLALSK 154

Query: 129 SS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTC 187
           +S VF  G +  G LG G +  +  S   I        +QV+A   H+  +  SG +F  
Sbjct: 155 ASEVFCWGQNKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGW 214

Query: 188 GDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQ 247
           G N     G  D N   + P L+++L+      +  G + T  LT  G V T G+  +GQ
Sbjct: 215 GRNKFGQLGLNDENDR-YVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQ 273

Query: 248 LGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVVYSFGSGSNFCLGHGE 305
           LGH  T     P+ +   E +GS+V QIA G  +  A V  +G +YSFG G N  LG G 
Sbjct: 274 LGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGS 331

Query: 306 QHDELQPRAIQ 316
             +   P  ++
Sbjct: 332 TSNRKSPFTVK 342


>gi|327277952|ref|XP_003223727.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
           1 [Anolis carolinensis]
          Length = 1052

 Score =  128 bits (321), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 104/311 (33%), Positives = 146/311 (46%), Gaps = 12/311 (3%)

Query: 156 RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 215
           R NF     V  V     H  FVL  G V+TCG N     GH  + +   RP  V AL  
Sbjct: 27  RCNFFLNKTVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRK---RPEQVGALDA 83

Query: 216 VPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRP-TPKSIAPLEEVGSVVQI 274
                V+ G   T  L  +G V+  G    GQLG   T +    P++I  L +V  +VQ+
Sbjct: 84  QNIVAVSCGEAHTLTLNDKGQVYAWGFAADGQLGLPGTEEYTRVPRNIKSLSDV-QIVQV 142

Query: 275 AAGPSYMLAVTGNGVVYSFGSGSNFCLGHG-EQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           A G  + LA++    V+S+G   +  LG G +   +  P+ I++    GI   +++AG  
Sbjct: 143 ACGYYHSLALSKGSEVFSWGQNKHGQLGLGYDLKKQTSPQLIKSLL--GIPFGQIAAGGA 200

Query: 334 HVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDT 393
           H  AL  SG V+ WG+   G LG  DE D+ +P  L SL+S   V +   +  T  L   
Sbjct: 201 HSFALTLSGAVFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYISCGEDHTAALTKE 260

Query: 394 GSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHT-VVVTDRGRLF 452
           G V+ FG  G+G LG    G     + PR +  L  + V+QI+ G  HT   V   GR++
Sbjct: 261 GGVFTFGAGGYGQLGHNSTG---HEINPRKVFELMGNIVTQIACGRQHTSAFVPSTGRIY 317

Query: 453 GFGDNERAQLG 463
            FG     QLG
Sbjct: 318 SFGLGGNGQLG 328



 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 87/276 (31%), Positives = 140/276 (50%), Gaps = 10/276 (3%)

Query: 204 IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 263
           +  PR          + V  GL  T F+   G V+TCG N  GQLGH  +  R  P+ + 
Sbjct: 22  VLEPRRCNFFLNKTVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKS--RKRPEQVG 79

Query: 264 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLG-HGEQHDELQPRAIQTFRRKG 322
            L+   ++V ++ G ++ L +   G VY++G  ++  LG  G +     PR I++     
Sbjct: 80  ALD-AQNIVAVSCGEAHTLTLNDKGQVYAWGFAADGQLGLPGTEEYTRVPRNIKSL--SD 136

Query: 323 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK-TLPEPLSSLKSHLAVQVC 381
           + +V+V+ G  H +AL     V++WG+   G LG G ++ K T P+ + SL      Q+ 
Sbjct: 137 VQIVQVACGYYHSLALSKGSEVFSWGQNKHGQLGLGYDLKKQTSPQLIKSLLGIPFGQIA 196

Query: 382 ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYH 441
           A    +F L  +G+V+G+G   FG LG  D   +D+ + P +L SLR+  +  IS G  H
Sbjct: 197 AGGAHSFALTLSGAVFGWGRNKFGQLGLNDE--NDRYV-PNLLKSLRSQKIVYISCGEDH 253

Query: 442 TVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF 477
           T  +T  G +F FG     QLGH++    + P ++F
Sbjct: 254 TAALTKEGGVFTFGAGGYGQLGHNSTGHEINPRKVF 289



 Score =  114 bits (286), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 87/291 (29%), Positives = 139/291 (47%), Gaps = 8/291 (2%)

Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 179
           R+   ++ + +V++CG +  G LGH     +     ++    A ++V VS  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKRP---EQVGALDAQNIVAVSCGEAHTLTLN 100

Query: 180 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 239
             GQV+  G  +    G   T      PR +++L  V   QV  G   +  L+    V +
Sbjct: 101 DKGQVYAWGFAADGQLGLPGTEEYTRVPRNIKSLSDVQIVQVACGYYHSLALSKGSEVFS 160

Query: 240 CGSNTHGQLGHGDTLDRPT-PKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
            G N HGQLG G  L + T P+ I  L  +    QIAAG ++  A+T +G V+ +G    
Sbjct: 161 WGQNKHGQLGLGYDLKKQTSPQLIKSLLGI-PFGQIAAGGAHSFALTLSGAVFGWGRNKF 219

Query: 299 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 358
             LG  +++D   P  +++ R + I  V +S G++H  AL   G V+T+G G  G LGH 
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRSQKI--VYISCGEDHTAALTKEGGVFTFGAGGYGQLGHN 277

Query: 359 DEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLG 408
               +  P  +  L  ++  Q+ C R+  +  +  TG +Y FG  G G LG
Sbjct: 278 STGHEINPRKVFELMGNIVTQIACGRQHTSAFVPSTGRIYSFGLGGNGQLG 328



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 79/258 (30%), Positives = 126/258 (48%), Gaps = 7/258 (2%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSASEN 173
           ++ G  HTL +++   V++ G +  G LG  P T +     R I   S   +VQV+    
Sbjct: 89  VSCGEAHTLTLNDKGQVYAWGFAADGQLGL-PGTEEYTRVPRNIKSLSDVQIVQVACGYY 147

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
           H+  + +  +VF+ G N     G     +    P+L+++L G+P  Q+ AG   +  LT+
Sbjct: 148 HSLALSKGSEVFSWGQNKHGQLGLGYDLKKQTSPQLIKSLLGIPFGQIAAGGAHSFALTL 207

Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
            G V   G N  GQLG  D  DR  P  +  L     +V I+ G  +  A+T  G V++F
Sbjct: 208 SGAVFGWGRNKFGQLGLNDENDRYVPNLLKSLRS-QKIVYISCGEDHTAALTKEGGVFTF 266

Query: 294 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA-LDSSGYVYTWGKGYC 352
           G+G    LGH     E+ PR +  F   G  V +++ G +H  A + S+G +Y++G G  
Sbjct: 267 GAGGYGQLGHNSTGHEINPRKV--FELMGNIVTQIACGRQHTSAFVPSTGRIYSFGLGGN 324

Query: 353 GALGHGDEIDKTLPEPLS 370
           G LG G   ++  P P+ 
Sbjct: 325 GQLGMGSTSNRKSPFPVK 342



 Score = 78.6 bits (192), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 67/206 (32%), Positives = 98/206 (47%), Gaps = 6/206 (2%)

Query: 114 MQITTGRYHTLLISN-SSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +Q+  G YH+L +S  S VFS G +  G LG G +  +  S   I         Q++A  
Sbjct: 140 VQVACGYYHSLALSKGSEVFSWGQNKHGQLGLGYDLKKQTSPQLIKSLLGIPFGQIAAGG 199

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            H+  +  SG VF  G N     G  D N   + P L+++L+      ++ G + T  LT
Sbjct: 200 AHSFALTLSGAVFGWGRNKFGQLGLNDENDR-YVPNLLKSLRSQKIVYISCGEDHTAALT 258

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVV 290
             G V T G+  +GQLGH  T     P+ +   E +G++V QIA G  +  A V   G +
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTGHEINPRKV--FELMGNIVTQIACGRQHTSAFVPSTGRI 316

Query: 291 YSFGSGSNFCLGHGEQHDELQPRAIQ 316
           YSFG G N  LG G   +   P  ++
Sbjct: 317 YSFGLGGNGQLGMGSTSNRKSPFPVK 342


>gi|350578534|ref|XP_001927286.4| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Sus scrofa]
          Length = 4859

 Score =  128 bits (321), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 103/339 (30%), Positives = 167/339 (49%), Gaps = 17/339 (5%)

Query: 115  QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQV---SA 170
            Q+  G+  T +I +N +V +CG    G LG G      V  T I+      V Q+     
Sbjct: 4029 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHV-LTVISALQGFVVTQLVTSCG 4087

Query: 171  SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
            S+ H+  + +SG+VF+ GD      GH +++R   RPR +EAL+G    Q++ G   +  
Sbjct: 4088 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQMSCGFKHSAV 4146

Query: 231  LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSVVQIAAGPSYMLAVTGNG 288
            +T  G + T G+  +G+LG G+T ++  P+ +  LE  ++G   Q+A G ++ LAV+ +G
Sbjct: 4147 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIG---QVACGLNHTLAVSADG 4203

Query: 289  -VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 347
             +V++FG G    LG G    +  P+ +      GI + +V+ G +  VAL   G+VYT+
Sbjct: 4204 SMVWAFGDGDYGKLGLGNSTAKSSPQKVDVL--CGIGIKKVACGTQFSVALTKDGHVYTF 4261

Query: 348  GKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSL 407
            G+     L  G   +   P+ +  L   +   V      T  L  TG VY +G    G L
Sbjct: 4262 GQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQL 4321

Query: 408  GFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT 446
            G    G ++ V  P ++  L+  +V QIS G  H+   T
Sbjct: 4322 GL---GHTNHVREPTLVTVLQGKNVRQISAGRCHSAAWT 4357



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 91/315 (28%), Positives = 144/315 (45%), Gaps = 25/315 (7%)

Query: 160 PSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTN------RPIFRPRLVEAL 213
           PS +    + A +     +   G V  CG  S    G  D+N      +  F P    ++
Sbjct: 400 PSFSDAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPH--RSI 457

Query: 214 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
           K V   + + G   T   T  G V + G   +G+LGHG++  +  PK I    +   VV 
Sbjct: 458 KKVSSSKGSDG--HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVC 515

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           ++AG  +  AVT +G +Y++G G    LGHG+ +     R I T  +   +V  VS G  
Sbjct: 516 VSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNS----RNIPTLVKDISNVGEVSCGSS 571

Query: 334 HVVALDSSGY-VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVD 392
           H +AL   G  V+++G G  G LGHGD      P+ + +L+     +VCA  + +  L  
Sbjct: 572 HTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTS 631

Query: 393 TGSVYGFG---WMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRG 449
           TG VY +G    +G GS            LRP++++ L A  +  IS G  H + ++   
Sbjct: 632 TGQVYAWGCGACLGCGS-------SEATALRPKLIEELAATRIVDISIGDSHCLALSHDN 684

Query: 450 RLFGFGDNERAQLGH 464
            ++ +G+N   Q G 
Sbjct: 685 EVYAWGNNSMGQCGQ 699



 Score = 98.2 bits (243), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 90/266 (33%), Positives = 128/266 (48%), Gaps = 14/266 (5%)

Query: 122 HTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
           HTL   +   VFS G    G LGHG  +TQ              VV VSA   H+A V +
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528

Query: 181 SGQVFTCGDNSSFCCGHRDTN-RPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH-VH 238
            G+++T G+      GH D+N R I  P LV+ +  V   +V+ G + T  L+  G  V 
Sbjct: 529 DGELYTWGEGDFGRLGHGDSNSRNI--PTLVKDISNV--GEVSCGSSHTIALSKDGRTVW 584

Query: 239 TCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
           + G   +G+LGHGDT     PK I  L+ +  + ++ AG    LA+T  G VY++G G+ 
Sbjct: 585 SFGGGDNGKLGHGDTNRVYKPKVIEALQGM-FIRKVCAGSQSSLALTSTGQVYAWGCGA- 642

Query: 299 FCLGHG-EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 357
            CLG G  +   L+P+ I+        +V +S GD H +AL     VY WG    G  G 
Sbjct: 643 -CLGCGSSEATALRPKLIEEL--AATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQ 699

Query: 358 GDEIDK-TLPEPLSSLKSHLAVQVCA 382
           G+     T P+ +S L      Q+ A
Sbjct: 700 GNSTGPITKPKKVSGLDGIAIQQISA 725



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 87/324 (26%), Positives = 150/324 (46%), Gaps = 13/324 (4%)

Query: 160  PSAAHVVQVSASENHAAFVLQS-GQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPC 218
            PS +   QV   +N   FV+Q+ G V  CG+ S    G  +++  +    ++ AL+G   
Sbjct: 4022 PSFSQAQQVICGQN-CTFVIQANGTVLACGEGSYGRLGQGNSDD-LHVLTVISALQGFVV 4079

Query: 219  KQVTAGLNFTGF---LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA 275
             Q+       G    LT  G V + G   +G+LGHG++  +  P+ I  L+    VVQ++
Sbjct: 4080 TQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQG-EEVVQMS 4138

Query: 276  AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHV 335
             G  +   VT +G +++FG+G    LG G   ++  P  +     +G  + +V+ G  H 
Sbjct: 4139 CGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTAL--EGYQIGQVACGLNHT 4196

Query: 336  VALDSSG-YVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 394
            +A+ + G  V+ +G G  G LG G+   K+ P+ +  L      +V    + +  L   G
Sbjct: 4197 LAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDG 4256

Query: 395  SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 454
             VY FG      +G P+ G +    RP+ +  L    +  ++ G  HT+ +   G ++ +
Sbjct: 4257 HVYTFGQDRL--IGLPE-GRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAW 4313

Query: 455  GDNERAQLGHDTLRGCLEPTEIFI 478
            G N   QLG        EPT + +
Sbjct: 4314 GSNSEGQLGLGHTNHVREPTLVTV 4337



 Score = 84.7 bits (208), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 68/230 (29%), Positives = 108/230 (46%), Gaps = 11/230 (4%)

Query: 237  VHTCGSNTHGQLGH-GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 295
            V+  G+  HGQL   G  +  P   + AP        Q+  G +    +  NG V + G 
Sbjct: 3997 VYLWGAGRHGQLAEAGRNVMVP---AAAP--SFSQAQQVICGQNCTFVIQANGTVLACGE 4051

Query: 296  GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG-DEHVVALDSSGYVYTWGKGYCGA 354
            GS   LG G   D      I   +   +  +  S G D H +AL  SG V++WG G  G 
Sbjct: 4052 GSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGK 4111

Query: 355  LGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGV 414
            LGHG+   +  P  + +L+    VQ+    + + V+   G ++ FG   +G LG  +   
Sbjct: 4112 LGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN--T 4169

Query: 415  SDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRL-FGFGDNERAQLG 463
            S+K L P  + +L  + + Q++ GL HT+ V+  G + + FGD +  +LG
Sbjct: 4170 SNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLG 4218



 Score = 59.7 bits (143), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 49/180 (27%), Positives = 82/180 (45%), Gaps = 13/180 (7%)

Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 349
           VY +GS S+  L  G Q   LQP+   +F         + AG      + + G V   GK
Sbjct: 374 VYVWGSNSSHQLVEGTQEKILQPKLAPSFS----DAQTIEAGQYCTFVISTDGSVRACGK 429

Query: 350 GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKR----KTFVLVDTGSVYGFGWMGFG 405
           G  G LG GD  +++  + L + + H +++  +  +     T      G V+ +G   +G
Sbjct: 430 GSYGRLGLGDSNNQSTLKKL-TFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYG 488

Query: 406 SLGFPDRGVSDKVLRPRILD-SLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 464
            LG    G S     P+++   L+   V  +S G  H+  VT+ G L+ +G+ +  +LGH
Sbjct: 489 KLG---HGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGH 545



 Score = 49.3 bits (116), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 41/143 (28%), Positives = 67/143 (46%), Gaps = 9/143 (6%)

Query: 344  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 403
            VY WG G  G L    E  + +  P ++     A QV   +  TFV+   G+V   G   
Sbjct: 3997 VYLWGAGRHGQLA---EAGRNVMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGS 4053

Query: 404  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLY---HTVVVTDRGRLFGFGDNERA 460
            +G LG   +G SD +    ++ +L+   V+Q+ T      H++ +T+ G +F +GD +  
Sbjct: 4054 YGRLG---QGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYG 4110

Query: 461  QLGHDTLRGCLEPTEIFIQEMEE 483
            +LGH        P +I   + EE
Sbjct: 4111 KLGHGNSDRQRRPRQIEALQGEE 4133



 Score = 48.9 bits (115), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 28/100 (28%), Positives = 48/100 (48%), Gaps = 2/100 (2%)

Query: 125 LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQV 184
           L S   V++ G   C  LG G      +    I   +A  +V +S  ++H   +    +V
Sbjct: 629 LTSTGQVYAWGCGAC--LGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEV 686

Query: 185 FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           +  G+NS   CG  ++  PI +P+ V  L G+  +Q++AG
Sbjct: 687 YAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAG 726


>gi|426233168|ref|XP_004010589.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Ovis aries]
          Length = 4856

 Score =  128 bits (321), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 103/339 (30%), Positives = 167/339 (49%), Gaps = 17/339 (5%)

Query: 115  QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQV---SA 170
            Q+  G+  T +I +N +V +CG    G LG G      V  T I+      V Q+     
Sbjct: 4026 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHV-LTVISALQGFVVTQLVTSCG 4084

Query: 171  SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
            S+ H+  + +SG+VF+ GD      GH +++R   RPR +EAL+G    Q++ G   +  
Sbjct: 4085 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQMSCGFKHSAV 4143

Query: 231  LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSVVQIAAGPSYMLAVTGNG 288
            +T  G + T G+  +G+LG G+T ++  P+ +  LE  ++G   Q+A G ++ LAV+ +G
Sbjct: 4144 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIG---QVACGLNHTLAVSADG 4200

Query: 289  -VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 347
             +V++FG G    LG G    +  P+ +      GI + +V+ G +  VAL   G+VYT+
Sbjct: 4201 SMVWAFGDGDYGKLGLGNSTAKSSPQKVDVL--CGIGIKKVACGTQFSVALTKDGHVYTF 4258

Query: 348  GKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSL 407
            G+     L  G   +   P+ +  L   +   V      T  L  TG VY +G    G L
Sbjct: 4259 GQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQL 4318

Query: 408  GFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT 446
            G    G ++ V  P ++  L+  +V QIS G  H+   T
Sbjct: 4319 GL---GHTNHVREPTLVTVLQGKNVRQISAGRCHSAAWT 4354



 Score =  111 bits (277), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 108/380 (28%), Positives = 168/380 (44%), Gaps = 31/380 (8%)

Query: 96  FLQSVEHSSDIVETSAGNMQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSF 154
           F +    +SD   T A    I TG   T ++S +  V+  GS+    L  G   TQ    
Sbjct: 340 FEEVCRMASDYSRTCASPDSIQTG--DTPIVSETCEVYVWGSNSSHQLVEG---TQEKIL 394

Query: 155 TRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTN------RPIFRPR 208
                PS +    + A +     +   G V  CG  S    G  D+N      +  F P 
Sbjct: 395 QPKLAPSFSDAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPH 454

Query: 209 LVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEV 268
              ++K V   + + G   T   T  G V + G   +G+LGHG++  +  PK I    + 
Sbjct: 455 --RSIKKVSSSKGSDG--HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQG 510

Query: 269 GSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRV 328
             VV ++AG  +  AVT +G +Y++G G    LGHG+ +     R I T  +   +V  V
Sbjct: 511 KVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNS----RNIPTLVKDISNVGEV 566

Query: 329 SAGDEHVVALDSSGY-VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKT 387
           S G  H +AL   G  V+++G G  G LGHGD      P+ + +L+     +VCA  + +
Sbjct: 567 SCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSS 626

Query: 388 FVLVDTGSVYGFG---WMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV 444
             L  TG VY +G    +G GS            LRP++++ L A  +  IS G  H + 
Sbjct: 627 LALTSTGQVYAWGCGACLGCGS-------SEATALRPKLIEELAATRIVDISIGDSHCLA 679

Query: 445 VTDRGRLFGFGDNERAQLGH 464
           ++    ++ +G+N   Q G 
Sbjct: 680 LSHDNEVYAWGNNSMGQCGQ 699



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 87/324 (26%), Positives = 150/324 (46%), Gaps = 13/324 (4%)

Query: 160  PSAAHVVQVSASENHAAFVLQS-GQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPC 218
            PS +   QV   +N   FV+Q+ G V  CG+ S    G  +++  +    ++ AL+G   
Sbjct: 4019 PSFSQAQQVICGQN-CTFVIQANGTVLACGEGSYGRLGQGNSDD-LHVLTVISALQGFVV 4076

Query: 219  KQVTAGLNFTGF---LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA 275
             Q+       G    LT  G V + G   +G+LGHG++  +  P+ I  L+    VVQ++
Sbjct: 4077 TQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQG-EEVVQMS 4135

Query: 276  AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHV 335
             G  +   VT +G +++FG+G    LG G   ++  P  +     +G  + +V+ G  H 
Sbjct: 4136 CGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTAL--EGYQIGQVACGLNHT 4193

Query: 336  VALDSSG-YVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 394
            +A+ + G  V+ +G G  G LG G+   K+ P+ +  L      +V    + +  L   G
Sbjct: 4194 LAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDG 4253

Query: 395  SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 454
             VY FG      +G P+ G +    RP+ +  L    +  ++ G  HT+ +   G ++ +
Sbjct: 4254 HVYTFGQDRL--IGLPE-GRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAW 4310

Query: 455  GDNERAQLGHDTLRGCLEPTEIFI 478
            G N   QLG        EPT + +
Sbjct: 4311 GSNSEGQLGLGHTNHVREPTLVTV 4334



 Score = 84.7 bits (208), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 68/230 (29%), Positives = 108/230 (46%), Gaps = 11/230 (4%)

Query: 237  VHTCGSNTHGQLGH-GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 295
            V+  G+  HGQL   G  +  P   + AP        Q+  G +    +  NG V + G 
Sbjct: 3994 VYLWGAGRHGQLAEAGRNVMVP---AAAP--SFSQAQQVICGQNCTFVIQANGTVLACGE 4048

Query: 296  GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG-DEHVVALDSSGYVYTWGKGYCGA 354
            GS   LG G   D      I   +   +  +  S G D H +AL  SG V++WG G  G 
Sbjct: 4049 GSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGK 4108

Query: 355  LGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGV 414
            LGHG+   +  P  + +L+    VQ+    + + V+   G ++ FG   +G LG  +   
Sbjct: 4109 LGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN--T 4166

Query: 415  SDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRL-FGFGDNERAQLG 463
            S+K L P  + +L  + + Q++ GL HT+ V+  G + + FGD +  +LG
Sbjct: 4167 SNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLG 4215



 Score = 48.9 bits (115), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 41/143 (28%), Positives = 67/143 (46%), Gaps = 9/143 (6%)

Query: 344  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 403
            VY WG G  G L    E  + +  P ++     A QV   +  TFV+   G+V   G   
Sbjct: 3994 VYLWGAGRHGQLA---EAGRNVMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGS 4050

Query: 404  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLY---HTVVVTDRGRLFGFGDNERA 460
            +G LG   +G SD +    ++ +L+   V+Q+ T      H++ +T+ G +F +GD +  
Sbjct: 4051 YGRLG---QGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYG 4107

Query: 461  QLGHDTLRGCLEPTEIFIQEMEE 483
            +LGH        P +I   + EE
Sbjct: 4108 KLGHGNSDRQRRPRQIEALQGEE 4130



 Score = 48.9 bits (115), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 28/100 (28%), Positives = 48/100 (48%), Gaps = 2/100 (2%)

Query: 125 LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQV 184
           L S   V++ G   C  LG G      +    I   +A  +V +S  ++H   +    +V
Sbjct: 629 LTSTGQVYAWGCGAC--LGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEV 686

Query: 185 FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           +  G+NS   CG  ++  PI +P+ V  L G+  +Q++AG
Sbjct: 687 YAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAG 726


>gi|402880677|ref|XP_003903924.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
           [Papio anubis]
          Length = 1057

 Score =  128 bits (321), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 89/276 (32%), Positives = 142/276 (51%), Gaps = 10/276 (3%)

Query: 204 IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 263
           +  PR  +       + V  GL  T F+   G V+TCG N  GQLGH  +  R  P+ + 
Sbjct: 22  VLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKS--RKKPEQVV 79

Query: 264 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH-GEQHDELQPRAIQTFRRKG 322
            L+   ++V ++ G ++ LA+   G VY++G  S+  LG  G +     PR I++     
Sbjct: 80  ALD-AQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSL--SD 136

Query: 323 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK-TLPEPLSSLKSHLAVQVC 381
           I +++V+ G  H +AL  +  V+ WG+   G LG G +  K T P+ + SL     +QV 
Sbjct: 137 IQIIQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQVA 196

Query: 382 ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYH 441
           A    +FVL  +G+++G+G   FG LG  D   +D+ + P +L SLR+  +  I  G  H
Sbjct: 197 AGGAHSFVLTLSGAIFGWGRNKFGQLGLNDE--NDRYV-PNLLKSLRSQKIVYICCGEDH 253

Query: 442 TVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF 477
           T  +T  G +F FG     QLGH++    + P ++F
Sbjct: 254 TAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVF 289



 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 104/333 (31%), Positives = 153/333 (45%), Gaps = 13/333 (3%)

Query: 135 GSSLCGVLGHGPETTQCVSFTRI-NFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSF 193
           G++  G LG G    + V   R  +F     V  V     H  FVL  G V+TCG N   
Sbjct: 5   GNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLG 64

Query: 194 CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGH-GD 252
             GH  + +   +P  V AL       V+ G   T  L  +G V+  G ++ GQLG  G 
Sbjct: 65  QLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGS 121

Query: 253 TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ-HDELQ 311
                 P++I  L ++  ++Q+A G  + LA++    V+ +G      LG G     +  
Sbjct: 122 EECIRVPRNIKSLSDI-QIIQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTS 180

Query: 312 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSS 371
           P+ I++    GI  ++V+AG  H   L  SG ++ WG+   G LG  DE D+ +P  L S
Sbjct: 181 PQLIKSLL--GIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKS 238

Query: 372 LKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHH 431
           L+S   V +C  +  T  L   G V+ FG  G+G LG      +   + PR +  L    
Sbjct: 239 LRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG---HNSTSHEINPRKVFELMGSI 295

Query: 432 VSQISTGLYHT-VVVTDRGRLFGFGDNERAQLG 463
           V+QI+ G  HT   V   GR++ FG     QLG
Sbjct: 296 VTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  110 bits (275), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 80/291 (27%), Positives = 138/291 (47%), Gaps = 8/291 (2%)

Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 179
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V VS  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVSCGEAHTLALN 100

Query: 180 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 239
             GQV+  G +S    G   +   I  PR +++L  +   QV  G   +  L+    V  
Sbjct: 101 DKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIIQVACGYYHSLALSKASEVFC 160

Query: 240 CGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
            G N +GQLG G D   + +P+ I  L  +   +Q+AAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKYGQLGLGTDCKKQTSPQLIKSLLGI-PFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 299 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 358
             LG  +++D   P  +++ R + I  V +  G++H  AL   G V+T+G G  G LGH 
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRSQKI--VYICCGEDHTAALTKEGGVFTFGAGGYGQLGHN 277

Query: 359 DEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLG 408
               +  P  +  L   +  Q+ C R+  +  +  +G +Y FG  G G LG
Sbjct: 278 STSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  101 bits (252), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 83/274 (30%), Positives = 132/274 (48%), Gaps = 10/274 (3%)

Query: 98  QSVEHSSDIVETSAGNM-QITTGRYHTLLISNS-SVFSCGSSLCGVLGH-GPETTQCVSF 154
           +S +    +V   A N+  ++ G  HTL +++   V++ G    G LG  G E  +C+  
Sbjct: 70  KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSE--ECIRV 127

Query: 155 TR-INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEAL 213
            R I   S   ++QV+    H+  + ++ +VF  G N     G     +    P+L+++L
Sbjct: 128 PRNIKSLSDIQIIQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLIKSL 187

Query: 214 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
            G+P  QV AG   +  LT+ G +   G N  GQLG  D  DR  P  +  L     +V 
Sbjct: 188 LGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRS-QKIVY 246

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           I  G  +  A+T  G V++FG+G    LGH     E+ PR +  F   G  V +++ G +
Sbjct: 247 ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQ 304

Query: 334 HVVA-LDSSGYVYTWGKGYCGALGHGDEIDKTLP 366
           H  A + SSG +Y++G G  G LG G   ++  P
Sbjct: 305 HTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338



 Score = 81.6 bits (200), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 77/251 (30%), Positives = 119/251 (47%), Gaps = 17/251 (6%)

Query: 70  IYA-GMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLISN 128
           +YA G+  + Q+ LL       +  +R  ++++  SDI       +Q+  G YH+L +S 
Sbjct: 105 VYAWGLDSDGQLGLLGS-----EECIRVPRNIKSLSDI-----QIIQVACGYYHSLALSK 154

Query: 129 SS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTC 187
           +S VF  G +  G LG G +  +  S   I        +QV+A   H+  +  SG +F  
Sbjct: 155 ASEVFCWGQNKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGW 214

Query: 188 GDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQ 247
           G N     G  D N   + P L+++L+      +  G + T  LT  G V T G+  +GQ
Sbjct: 215 GRNKFGQLGLNDENDR-YVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQ 273

Query: 248 LGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVVYSFGSGSNFCLGHGE 305
           LGH  T     P+ +   E +GS+V QIA G  +  A V  +G +YSFG G N  LG G 
Sbjct: 274 LGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGS 331

Query: 306 QHDELQPRAIQ 316
             +   P  ++
Sbjct: 332 TSNRKSPFTVK 342


>gi|383872260|ref|NP_001244507.1| probable E3 ubiquitin-protein ligase HERC4 [Macaca mulatta]
 gi|355782894|gb|EHH64815.1| hypothetical protein EGM_18130 [Macaca fascicularis]
 gi|380786489|gb|AFE65120.1| putative E3 ubiquitin-protein ligase HERC4 isoform a [Macaca
           mulatta]
 gi|383411599|gb|AFH29013.1| putative E3 ubiquitin-protein ligase HERC4 isoform a [Macaca
           mulatta]
          Length = 1057

 Score =  128 bits (321), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 89/276 (32%), Positives = 142/276 (51%), Gaps = 10/276 (3%)

Query: 204 IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 263
           +  PR  +       + V  GL  T F+   G V+TCG N  GQLGH  +  R  P+ + 
Sbjct: 22  VLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKS--RKKPEQVV 79

Query: 264 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH-GEQHDELQPRAIQTFRRKG 322
            L+   ++V ++ G ++ LA+   G VY++G  S+  LG  G +     PR I++     
Sbjct: 80  ALD-AQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSL--SD 136

Query: 323 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK-TLPEPLSSLKSHLAVQVC 381
           I +++V+ G  H +AL  +  V+ WG+   G LG G +  K T P+ + SL     +QV 
Sbjct: 137 IQIIQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQVA 196

Query: 382 ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYH 441
           A    +FVL  +G+++G+G   FG LG  D   +D+ + P +L SLR+  +  I  G  H
Sbjct: 197 AGGAHSFVLTLSGAIFGWGRNKFGQLGLNDE--NDRYV-PNLLKSLRSQKIVYICCGEDH 253

Query: 442 TVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF 477
           T  +T  G +F FG     QLGH++    + P ++F
Sbjct: 254 TAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVF 289



 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 104/333 (31%), Positives = 153/333 (45%), Gaps = 13/333 (3%)

Query: 135 GSSLCGVLGHGPETTQCVSFTRI-NFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSF 193
           G++  G LG G    + V   R  +F     V  V     H  FVL  G V+TCG N   
Sbjct: 5   GNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLG 64

Query: 194 CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGH-GD 252
             GH  + +   +P  V AL       V+ G   T  L  +G V+  G ++ GQLG  G 
Sbjct: 65  QLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGS 121

Query: 253 TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ-HDELQ 311
                 P++I  L ++  ++Q+A G  + LA++    V+ +G      LG G     +  
Sbjct: 122 EECIRVPRNIKSLSDI-QIIQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTS 180

Query: 312 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSS 371
           P+ I++    GI  ++V+AG  H   L  SG ++ WG+   G LG  DE D+ +P  L S
Sbjct: 181 PQLIKSLL--GIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKS 238

Query: 372 LKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHH 431
           L+S   V +C  +  T  L   G V+ FG  G+G LG      +   + PR +  L    
Sbjct: 239 LRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG---HNSTSHEINPRKVFELMGSI 295

Query: 432 VSQISTGLYHT-VVVTDRGRLFGFGDNERAQLG 463
           V+QI+ G  HT   V   GR++ FG     QLG
Sbjct: 296 VTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  110 bits (275), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 80/291 (27%), Positives = 138/291 (47%), Gaps = 8/291 (2%)

Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 179
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V VS  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVSCGEAHTLALN 100

Query: 180 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 239
             GQV+  G +S    G   +   I  PR +++L  +   QV  G   +  L+    V  
Sbjct: 101 DKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIIQVACGYYHSLALSKASEVFC 160

Query: 240 CGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
            G N +GQLG G D   + +P+ I  L  +   +Q+AAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKYGQLGLGTDCKKQTSPQLIKSLLGI-PFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 299 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 358
             LG  +++D   P  +++ R + I  V +  G++H  AL   G V+T+G G  G LGH 
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRSQKI--VYICCGEDHTAALTKEGGVFTFGAGGYGQLGHN 277

Query: 359 DEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLG 408
               +  P  +  L   +  Q+ C R+  +  +  +G +Y FG  G G LG
Sbjct: 278 STSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  101 bits (252), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 83/274 (30%), Positives = 132/274 (48%), Gaps = 10/274 (3%)

Query: 98  QSVEHSSDIVETSAGNM-QITTGRYHTLLISNS-SVFSCGSSLCGVLGH-GPETTQCVSF 154
           +S +    +V   A N+  ++ G  HTL +++   V++ G    G LG  G E  +C+  
Sbjct: 70  KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSE--ECIRV 127

Query: 155 TR-INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEAL 213
            R I   S   ++QV+    H+  + ++ +VF  G N     G     +    P+L+++L
Sbjct: 128 PRNIKSLSDIQIIQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLIKSL 187

Query: 214 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
            G+P  QV AG   +  LT+ G +   G N  GQLG  D  DR  P  +  L     +V 
Sbjct: 188 LGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRS-QKIVY 246

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           I  G  +  A+T  G V++FG+G    LGH     E+ PR +  F   G  V +++ G +
Sbjct: 247 ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQ 304

Query: 334 HVVA-LDSSGYVYTWGKGYCGALGHGDEIDKTLP 366
           H  A + SSG +Y++G G  G LG G   ++  P
Sbjct: 305 HTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338



 Score = 81.6 bits (200), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 77/251 (30%), Positives = 119/251 (47%), Gaps = 17/251 (6%)

Query: 70  IYA-GMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLISN 128
           +YA G+  + Q+ LL       +  +R  ++++  SDI       +Q+  G YH+L +S 
Sbjct: 105 VYAWGLDSDGQLGLLGS-----EECIRVPRNIKSLSDI-----QIIQVACGYYHSLALSK 154

Query: 129 SS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTC 187
           +S VF  G +  G LG G +  +  S   I        +QV+A   H+  +  SG +F  
Sbjct: 155 ASEVFCWGQNKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGW 214

Query: 188 GDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQ 247
           G N     G  D N   + P L+++L+      +  G + T  LT  G V T G+  +GQ
Sbjct: 215 GRNKFGQLGLNDENDR-YVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQ 273

Query: 248 LGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVVYSFGSGSNFCLGHGE 305
           LGH  T     P+ +   E +GS+V QIA G  +  A V  +G +YSFG G N  LG G 
Sbjct: 274 LGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGS 331

Query: 306 QHDELQPRAIQ 316
             +   P  ++
Sbjct: 332 TSNRKSPFTVK 342


>gi|222629908|gb|EEE62040.1| hypothetical protein OsJ_16822 [Oryza sativa Japonica Group]
          Length = 841

 Score =  128 bits (321), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 100/325 (30%), Positives = 148/325 (45%), Gaps = 19/325 (5%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V  V     HAA V ++G VFT G++S    GH  T      PRLVE+L       V  G
Sbjct: 79  VYHVDCGVRHAALVTRNGDVFTWGEDSGGRLGH-GTREDSVHPRLVESLAACNVDFVACG 137

Query: 225 LNFTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 282
              T  +T  G ++T G  TH  G LGHG       PK I+   +   V  ++ G  +  
Sbjct: 138 EFHTCAVTTTGELYTWGDGTHNVGLLGHGTDAGHWIPKRISGALDGLPVAYVSCGTWHTA 197

Query: 283 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD--- 339
            +T  G +++FG GS   LGHG       P+ +++    G+  + V+ G  H  A+    
Sbjct: 198 LITSMGQLFTFGDGSFGVLGHGNLTSISCPKEVESL--SGLKTIAVACGVWHTAAIVEVI 255

Query: 340 --------SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 391
                   S+G ++TWG G    LGHGD+  +  P  ++SL  +   +V      T  L 
Sbjct: 256 VTHSSSSVSAGKLFTWGDGDKHRLGHGDKESRLKPTCVASLIDYDFYRVACGHSLTVCLT 315

Query: 392 DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRL 451
            +G V   G   +G LG P+   SD  L   + D +   HV Q++ G YH  V+T R  +
Sbjct: 316 TSGKVLSMGNSVYGQLGNPN---SDGRLPCLVEDRIAGEHVLQVACGSYHVAVLTGRSEV 372

Query: 452 FGFGDNERAQLGHDTLRGCLEPTEI 476
           F +G     +LGH  +     PT++
Sbjct: 373 FTWGKGANGRLGHGDIEDRKVPTQV 397



 Score = 92.8 bits (229), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 81/272 (29%), Positives = 120/272 (44%), Gaps = 18/272 (6%)

Query: 116 ITTGRYHTLLISNSS---VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +  G +HT  ++ +     +  G+   G+LGHG +    +            V  VS   
Sbjct: 134 VACGEFHTCAVTTTGELYTWGDGTHNVGLLGHGTDAGHWIPKRISGALDGLPVAYVSCGT 193

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            H A +   GQ+FT GD S    GH +    I  P+ VE+L G+    V  G+  T  + 
Sbjct: 194 WHTALITSMGQLFTFGDGSFGVLGHGNLT-SISCPKEVESLSGLKTIAVACGVWHTAAIV 252

Query: 233 -----------IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 281
                        G + T G     +LGHGD   R  P  +A L +     ++A G S  
Sbjct: 253 EVIVTHSSSSVSAGKLFTWGDGDKHRLGHGDKESRLKPTCVASLIDY-DFYRVACGHSLT 311

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 341
           + +T +G V S G+     LG+      L P  ++  R  G HV++V+ G  HV  L   
Sbjct: 312 VCLTTSGKVLSMGNSVYGQLGNPNSDGRL-PCLVED-RIAGEHVLQVACGSYHVAVLTGR 369

Query: 342 GYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
             V+TWGKG  G LGHGD  D+ +P  + +LK
Sbjct: 370 SEVFTWGKGANGRLGHGDIEDRKVPTQVEALK 401



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 72/243 (29%), Positives = 115/243 (47%), Gaps = 25/243 (10%)

Query: 252 DTLDRPTPKS----IAPLEE--VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGE 305
           DT+ R T K+      PLE   V  V  +  G  +   VT NG V+++G  S   LGHG 
Sbjct: 54  DTIIRSTEKTDFLLPKPLESRLVLDVYHVDCGVRHAALVTRNGDVFTWGEDSGGRLGHGT 113

Query: 306 QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY--CGALGHGDEIDK 363
           + D + PR +++      +V  V+ G+ H  A+ ++G +YTWG G    G LGHG +   
Sbjct: 114 REDSVHPRLVESL--AACNVDFVACGEFHTCAVTTTGELYTWGDGTHNVGLLGHGTDAGH 171

Query: 364 TLPEPLSSLKSHLAVQ-VCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPR 422
            +P+ +S     L V  V      T ++   G ++ FG   FG LG    G    +  P+
Sbjct: 172 WIPKRISGALDGLPVAYVSCGTWHTALITSMGQLFTFGDGSFGVLGH---GNLTSISCPK 228

Query: 423 ILDSLRAHHVSQISTGLYHTVVVTD-----------RGRLFGFGDNERAQLGHDTLRGCL 471
            ++SL       ++ G++HT  + +            G+LF +GD ++ +LGH      L
Sbjct: 229 EVESLSGLKTIAVACGVWHTAAIVEVIVTHSSSSVSAGKLFTWGDGDKHRLGHGDKESRL 288

Query: 472 EPT 474
           +PT
Sbjct: 289 KPT 291



 Score = 82.4 bits (202), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 78/288 (27%), Positives = 129/288 (44%), Gaps = 19/288 (6%)

Query: 198 RDTNRPIFR-PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDR 256
           R T +  F  P+ +E+   +    V  G+     +T  G V T G ++ G+LGHG   D 
Sbjct: 58  RSTEKTDFLLPKPLESRLVLDVYHVDCGVRHAALVTRNGDVFTWGEDSGGRLGHGTREDS 117

Query: 257 PTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC--LGHGEQHDELQPRA 314
             P+ +  L    +V  +A G  +  AVT  G +Y++G G++    LGHG       P+ 
Sbjct: 118 VHPRLVESLAAC-NVDFVACGEFHTCAVTTTGELYTWGDGTHNVGLLGHGTDAGHWIPKR 176

Query: 315 IQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKS 374
           I +    G+ V  VS G  H   + S G ++T+G G  G LGHG+    + P+ + SL  
Sbjct: 177 I-SGALDGLPVAYVSCGTWHTALITSMGQLFTFGDGSFGVLGHGNLTSISCPKEVESLSG 235

Query: 375 HLAVQVCARKRKTFVLVD-----------TGSVYGFGWMGFGSLGFPDRGVSDKVLRPRI 423
              + V      T  +V+            G ++ +G      LG  D+   +  L+P  
Sbjct: 236 LKTIAVACGVWHTAAIVEVIVTHSSSSVSAGKLFTWGDGDKHRLGHGDK---ESRLKPTC 292

Query: 424 LDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCL 471
           + SL  +   +++ G   TV +T  G++   G++   QLG+    G L
Sbjct: 293 VASLIDYDFYRVACGHSLTVCLTTSGKVLSMGNSVYGQLGNPNSDGRL 340



 Score = 72.4 bits (176), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 60/221 (27%), Positives = 108/221 (48%), Gaps = 17/221 (7%)

Query: 116 ITTGRYHTLLISN-SSVFSCGSSLCGVLGHG-------PETTQCVSFTRI-----NFPSA 162
           ++ G +HT LI++   +F+ G    GVLGHG       P+  + +S  +           
Sbjct: 189 VSCGTWHTALITSMGQLFTFGDGSFGVLGHGNLTSISCPKEVESLSGLKTIAVACGVWHT 248

Query: 163 AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 222
           A +V+V  +  H++  + +G++FT GD      GH D    + +P  V +L      +V 
Sbjct: 249 AAIVEVIVT--HSSSSVSAGKLFTWGDGDKHRLGHGDKESRL-KPTCVASLIDYDFYRVA 305

Query: 223 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 282
            G + T  LT  G V + G++ +GQLG+ ++ D   P  +        V+Q+A G  ++ 
Sbjct: 306 CGHSLTVCLTTSGKVLSMGNSVYGQLGNPNS-DGRLPCLVEDRIAGEHVLQVACGSYHVA 364

Query: 283 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGI 323
            +TG   V+++G G+N  LGHG+  D   P  ++  + + +
Sbjct: 365 VLTGRSEVFTWGKGANGRLGHGDIEDRKVPTQVEALKDRAV 405



 Score = 56.2 bits (134), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 45/149 (30%), Positives = 67/149 (44%), Gaps = 14/149 (9%)

Query: 339 DSSGYVYTWGKGYC---------GALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFV 389
           DS G VY WG+ +C           +   ++ D  LP+PL S        V    R   +
Sbjct: 32  DSLGDVYVWGEVFCENSVRVGSDTIIRSTEKTDFLLPKPLESRLVLDVYHVDCGVRHAAL 91

Query: 390 LVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRG 449
           +   G V+ +G    G LG    G  +  + PR+++SL A +V  ++ G +HT  VT  G
Sbjct: 92  VTRNGDVFTWGEDSGGRLGH---GTREDSVHPRLVESLAACNVDFVACGEFHTCAVTTTG 148

Query: 450 RLFGFGD--NERAQLGHDTLRGCLEPTEI 476
            L+ +GD  +    LGH T  G   P  I
Sbjct: 149 ELYTWGDGTHNVGLLGHGTDAGHWIPKRI 177


>gi|296220559|ref|XP_002756357.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
           [Callithrix jacchus]
          Length = 979

 Score =  128 bits (321), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 90/276 (32%), Positives = 142/276 (51%), Gaps = 10/276 (3%)

Query: 204 IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 263
           +  PR  +       + V  GL  T F+   G V+TCG N  GQLGH  +  R  P+ + 
Sbjct: 22  VLEPRKSDFFINKKVQDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKS--RKKPEQVV 79

Query: 264 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH-GEQHDELQPRAIQTFRRKG 322
            L+   ++V ++ G ++ LA+   G VY++G  S+  LG  G +     PR I++     
Sbjct: 80  ALD-AQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSL--SD 136

Query: 323 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK-TLPEPLSSLKSHLAVQVC 381
           I +V+V+ G  H +AL  +  V+ WG+   G LG G +  K T P+ + SL     +QV 
Sbjct: 137 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQVA 196

Query: 382 ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYH 441
           A    +FVL  +G+++G+G   FG LG  D   +D+ + P +L SLR+  +  I  G  H
Sbjct: 197 AGGAHSFVLTLSGAIFGWGRNKFGQLGLNDE--NDRYV-PNLLKSLRSQKIVYICCGEDH 253

Query: 442 TVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF 477
           T  +T  G +F FG     QLGH++    + P ++F
Sbjct: 254 TAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVF 289



 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 105/333 (31%), Positives = 153/333 (45%), Gaps = 13/333 (3%)

Query: 135 GSSLCGVLGHGPETTQCVSFTRI-NFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSF 193
           G++  G LG G    + V   R  +F     V  V     H  FVL  G V+TCG N   
Sbjct: 5   GNASFGQLGLGGIDEEIVLEPRKSDFFINKKVQDVGCGLRHTVFVLDDGTVYTCGCNDLG 64

Query: 194 CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGH-GD 252
             GH  + +   +P  V AL       V+ G   T  L  +G V+  G ++ GQLG  G 
Sbjct: 65  QLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGS 121

Query: 253 TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ-HDELQ 311
                 P++I  L ++  +VQ+A G  + LA++    V+ +G      LG G     +  
Sbjct: 122 EECIRVPRNIKSLSDI-QIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTS 180

Query: 312 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSS 371
           P+ I++    GI  ++V+AG  H   L  SG ++ WG+   G LG  DE D+ +P  L S
Sbjct: 181 PQLIKSLL--GIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKS 238

Query: 372 LKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHH 431
           L+S   V +C  +  T  L   G V+ FG  G+G LG      +   + PR +  L    
Sbjct: 239 LRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG---HNSTSHEINPRKVFELMGSI 295

Query: 432 VSQISTGLYHT-VVVTDRGRLFGFGDNERAQLG 463
           V+QI+ G  HT   V   GR++ FG     QLG
Sbjct: 296 VTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 80/291 (27%), Positives = 138/291 (47%), Gaps = 8/291 (2%)

Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 179
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V VS  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVSCGEAHTLALN 100

Query: 180 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 239
             GQV+  G +S    G   +   I  PR +++L  +   QV  G   +  L+    V  
Sbjct: 101 DKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFC 160

Query: 240 CGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
            G N +GQLG G D   + +P+ I  L  +   +Q+AAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKYGQLGLGTDCKKQTSPQLIKSLLGI-PFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 299 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 358
             LG  +++D   P  +++ R + I  V +  G++H  AL   G V+T+G G  G LGH 
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRSQKI--VYICCGEDHTAALTKEGGVFTFGAGGYGQLGHN 277

Query: 359 DEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLG 408
               +  P  +  L   +  Q+ C R+  +  +  +G +Y FG  G G LG
Sbjct: 278 STSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  102 bits (254), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 84/274 (30%), Positives = 132/274 (48%), Gaps = 10/274 (3%)

Query: 98  QSVEHSSDIVETSAGNM-QITTGRYHTLLISNS-SVFSCGSSLCGVLGH-GPETTQCVSF 154
           +S +    +V   A N+  ++ G  HTL +++   V++ G    G LG  G E  +C+  
Sbjct: 70  KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSE--ECIRV 127

Query: 155 TR-INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEAL 213
            R I   S   +VQV+    H+  + ++ +VF  G N     G     +    P+L+++L
Sbjct: 128 PRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLIKSL 187

Query: 214 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
            G+P  QV AG   +  LT+ G +   G N  GQLG  D  DR  P  +  L     +V 
Sbjct: 188 LGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRS-QKIVY 246

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           I  G  +  A+T  G V++FG+G    LGH     E+ PR +  F   G  V +++ G +
Sbjct: 247 ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQ 304

Query: 334 HVVA-LDSSGYVYTWGKGYCGALGHGDEIDKTLP 366
           H  A + SSG +Y++G G  G LG G   ++  P
Sbjct: 305 HTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338



 Score = 81.6 bits (200), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 77/251 (30%), Positives = 119/251 (47%), Gaps = 17/251 (6%)

Query: 70  IYA-GMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLISN 128
           +YA G+  + Q+ LL       +  +R  ++++  SDI       +Q+  G YH+L +S 
Sbjct: 105 VYAWGLDSDGQLGLLGS-----EECIRVPRNIKSLSDI-----QIVQVACGYYHSLALSK 154

Query: 129 SS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTC 187
           +S VF  G +  G LG G +  +  S   I        +QV+A   H+  +  SG +F  
Sbjct: 155 ASEVFCWGQNKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGW 214

Query: 188 GDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQ 247
           G N     G  D N   + P L+++L+      +  G + T  LT  G V T G+  +GQ
Sbjct: 215 GRNKFGQLGLNDENDR-YVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQ 273

Query: 248 LGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVVYSFGSGSNFCLGHGE 305
           LGH  T     P+ +   E +GS+V QIA G  +  A V  +G +YSFG G N  LG G 
Sbjct: 274 LGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGS 331

Query: 306 QHDELQPRAIQ 316
             +   P  ++
Sbjct: 332 TSNRKSPFTVK 342


>gi|402880679|ref|XP_003903925.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 3
           [Papio anubis]
          Length = 979

 Score =  128 bits (321), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 89/276 (32%), Positives = 142/276 (51%), Gaps = 10/276 (3%)

Query: 204 IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 263
           +  PR  +       + V  GL  T F+   G V+TCG N  GQLGH  +  R  P+ + 
Sbjct: 22  VLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKS--RKKPEQVV 79

Query: 264 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH-GEQHDELQPRAIQTFRRKG 322
            L+   ++V ++ G ++ LA+   G VY++G  S+  LG  G +     PR I++     
Sbjct: 80  ALD-AQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSL--SD 136

Query: 323 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK-TLPEPLSSLKSHLAVQVC 381
           I +++V+ G  H +AL  +  V+ WG+   G LG G +  K T P+ + SL     +QV 
Sbjct: 137 IQIIQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQVA 196

Query: 382 ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYH 441
           A    +FVL  +G+++G+G   FG LG  D   +D+ + P +L SLR+  +  I  G  H
Sbjct: 197 AGGAHSFVLTLSGAIFGWGRNKFGQLGLNDE--NDRYV-PNLLKSLRSQKIVYICCGEDH 253

Query: 442 TVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF 477
           T  +T  G +F FG     QLGH++    + P ++F
Sbjct: 254 TAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVF 289



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 104/333 (31%), Positives = 153/333 (45%), Gaps = 13/333 (3%)

Query: 135 GSSLCGVLGHGPETTQCVSFTRI-NFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSF 193
           G++  G LG G    + V   R  +F     V  V     H  FVL  G V+TCG N   
Sbjct: 5   GNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLG 64

Query: 194 CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGH-GD 252
             GH  + +   +P  V AL       V+ G   T  L  +G V+  G ++ GQLG  G 
Sbjct: 65  QLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGS 121

Query: 253 TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ-HDELQ 311
                 P++I  L ++  ++Q+A G  + LA++    V+ +G      LG G     +  
Sbjct: 122 EECIRVPRNIKSLSDI-QIIQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTS 180

Query: 312 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSS 371
           P+ I++    GI  ++V+AG  H   L  SG ++ WG+   G LG  DE D+ +P  L S
Sbjct: 181 PQLIKSLL--GIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKS 238

Query: 372 LKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHH 431
           L+S   V +C  +  T  L   G V+ FG  G+G LG      +   + PR +  L    
Sbjct: 239 LRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG---HNSTSHEINPRKVFELMGSI 295

Query: 432 VSQISTGLYHT-VVVTDRGRLFGFGDNERAQLG 463
           V+QI+ G  HT   V   GR++ FG     QLG
Sbjct: 296 VTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 80/291 (27%), Positives = 138/291 (47%), Gaps = 8/291 (2%)

Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 179
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V VS  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVSCGEAHTLALN 100

Query: 180 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 239
             GQV+  G +S    G   +   I  PR +++L  +   QV  G   +  L+    V  
Sbjct: 101 DKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIIQVACGYYHSLALSKASEVFC 160

Query: 240 CGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
            G N +GQLG G D   + +P+ I  L  +   +Q+AAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKYGQLGLGTDCKKQTSPQLIKSLLGI-PFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 299 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 358
             LG  +++D   P  +++ R + I  V +  G++H  AL   G V+T+G G  G LGH 
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRSQKI--VYICCGEDHTAALTKEGGVFTFGAGGYGQLGHN 277

Query: 359 DEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLG 408
               +  P  +  L   +  Q+ C R+  +  +  +G +Y FG  G G LG
Sbjct: 278 STSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  101 bits (252), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 83/274 (30%), Positives = 132/274 (48%), Gaps = 10/274 (3%)

Query: 98  QSVEHSSDIVETSAGNM-QITTGRYHTLLISNS-SVFSCGSSLCGVLGH-GPETTQCVSF 154
           +S +    +V   A N+  ++ G  HTL +++   V++ G    G LG  G E  +C+  
Sbjct: 70  KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSE--ECIRV 127

Query: 155 TR-INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEAL 213
            R I   S   ++QV+    H+  + ++ +VF  G N     G     +    P+L+++L
Sbjct: 128 PRNIKSLSDIQIIQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLIKSL 187

Query: 214 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
            G+P  QV AG   +  LT+ G +   G N  GQLG  D  DR  P  +  L     +V 
Sbjct: 188 LGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRS-QKIVY 246

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           I  G  +  A+T  G V++FG+G    LGH     E+ PR +  F   G  V +++ G +
Sbjct: 247 ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQ 304

Query: 334 HVVA-LDSSGYVYTWGKGYCGALGHGDEIDKTLP 366
           H  A + SSG +Y++G G  G LG G   ++  P
Sbjct: 305 HTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338



 Score = 81.6 bits (200), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 77/251 (30%), Positives = 119/251 (47%), Gaps = 17/251 (6%)

Query: 70  IYA-GMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLISN 128
           +YA G+  + Q+ LL       +  +R  ++++  SDI       +Q+  G YH+L +S 
Sbjct: 105 VYAWGLDSDGQLGLLGS-----EECIRVPRNIKSLSDI-----QIIQVACGYYHSLALSK 154

Query: 129 SS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTC 187
           +S VF  G +  G LG G +  +  S   I        +QV+A   H+  +  SG +F  
Sbjct: 155 ASEVFCWGQNKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGW 214

Query: 188 GDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQ 247
           G N     G  D N   + P L+++L+      +  G + T  LT  G V T G+  +GQ
Sbjct: 215 GRNKFGQLGLNDENDR-YVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQ 273

Query: 248 LGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVVYSFGSGSNFCLGHGE 305
           LGH  T     P+ +   E +GS+V QIA G  +  A V  +G +YSFG G N  LG G 
Sbjct: 274 LGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGS 331

Query: 306 QHDELQPRAIQ 316
             +   P  ++
Sbjct: 332 TSNRKSPFTVK 342


>gi|417405688|gb|JAA49548.1| Putative e3 ubiquitin-protein ligase herc4 [Desmodus rotundus]
          Length = 1049

 Score =  128 bits (321), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 89/276 (32%), Positives = 142/276 (51%), Gaps = 10/276 (3%)

Query: 204 IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 263
           +  PR  +       + V  GL  T F+   G V+TCG N  GQLGH  +  R  P+ + 
Sbjct: 22  VLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKS--RKKPEQVV 79

Query: 264 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH-GEQHDELQPRAIQTFRRKG 322
            L+   ++V ++ G ++ LA+   G VY++G  S+  LG  G +     PR I++     
Sbjct: 80  ALD-AQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSL--SD 136

Query: 323 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTL-PEPLSSLKSHLAVQVC 381
           I +V+V+ G  H +AL  +  V++WG+   G LG G + +K   P+ + SL     +QV 
Sbjct: 137 IQIVQVACGYYHSLALSKASEVFSWGQNKYGQLGLGIDCNKQASPQLIKSLTGIPFMQVA 196

Query: 382 ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYH 441
           A    +FVL  +G+++G+G   FG LG  D   +D+ + P +L SLR   +  I  G  H
Sbjct: 197 AGGAHSFVLTLSGAIFGWGRNKFGQLGLNDE--NDRYV-PNLLKSLRTQKIVYICCGEDH 253

Query: 442 TVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF 477
           T  +T  G +F FG     QLGH++    + P ++F
Sbjct: 254 TAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVF 289



 Score =  125 bits (314), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 105/333 (31%), Positives = 156/333 (46%), Gaps = 13/333 (3%)

Query: 135 GSSLCGVLGHGPETTQCVSFTRI-NFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSF 193
           G++  G LG G    + V   R  +F     V  V     H  FVL  G V+TCG N   
Sbjct: 5   GNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLG 64

Query: 194 CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGH-GD 252
             GH  + +   +P  V AL       V+ G   T  L  +G V+  G ++ GQLG  G 
Sbjct: 65  QLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGS 121

Query: 253 TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHG-EQHDELQ 311
                 P++I  L ++  +VQ+A G  + LA++    V+S+G      LG G + + +  
Sbjct: 122 EECIRVPRNIKSLSDI-QIVQVACGYYHSLALSKASEVFSWGQNKYGQLGLGIDCNKQAS 180

Query: 312 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSS 371
           P+ I++    GI  ++V+AG  H   L  SG ++ WG+   G LG  DE D+ +P  L S
Sbjct: 181 PQLIKSL--TGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKS 238

Query: 372 LKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHH 431
           L++   V +C  +  T  L   G V+ FG  G+G LG      +   + PR +  L    
Sbjct: 239 LRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG---HNSTSHEINPRKVFELMGSI 295

Query: 432 VSQISTGLYHT-VVVTDRGRLFGFGDNERAQLG 463
           V+QI+ G  HT   V   GR++ FG     QLG
Sbjct: 296 VTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  111 bits (277), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 80/291 (27%), Positives = 139/291 (47%), Gaps = 8/291 (2%)

Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 179
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V VS  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVSCGEAHTLALN 100

Query: 180 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 239
             GQV+  G +S    G   +   I  PR +++L  +   QV  G   +  L+    V +
Sbjct: 101 DKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFS 160

Query: 240 CGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
            G N +GQLG G D   + +P+ I  L  +   +Q+AAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKYGQLGLGIDCNKQASPQLIKSLTGI-PFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 299 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 358
             LG  +++D   P  +++ R + I  V +  G++H  AL   G V+T+G G  G LGH 
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRTQKI--VYICCGEDHTAALTKEGGVFTFGAGGYGQLGHN 277

Query: 359 DEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLG 408
               +  P  +  L   +  Q+ C R+  +  +  +G +Y FG  G G LG
Sbjct: 278 STSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  102 bits (253), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 86/275 (31%), Positives = 135/275 (49%), Gaps = 12/275 (4%)

Query: 98  QSVEHSSDIVETSAGNM-QITTGRYHTLLISNS-SVFSCGSSLCGVLGH-GPETTQCVSF 154
           +S +    +V   A N+  ++ G  HTL +++   V++ G    G LG  G E  +C+  
Sbjct: 70  KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSE--ECIRV 127

Query: 155 TR-INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEA 212
            R I   S   +VQV+    H+  + ++ +VF+ G N     G   D N+    P+L+++
Sbjct: 128 PRNIKSLSDIQIVQVACGYYHSLALSKASEVFSWGQNKYGQLGLGIDCNKQA-SPQLIKS 186

Query: 213 LKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV 272
           L G+P  QV AG   +  LT+ G +   G N  GQLG  D  DR  P  +  L     +V
Sbjct: 187 LTGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLR-TQKIV 245

Query: 273 QIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGD 332
            I  G  +  A+T  G V++FG+G    LGH     E+ PR +  F   G  V +++ G 
Sbjct: 246 YICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGR 303

Query: 333 EHVVA-LDSSGYVYTWGKGYCGALGHGDEIDKTLP 366
           +H  A + SSG +Y++G G  G LG G   ++  P
Sbjct: 304 QHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 78/251 (31%), Positives = 121/251 (48%), Gaps = 17/251 (6%)

Query: 70  IYA-GMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLISN 128
           +YA G+  + Q+ LL       +  +R  ++++  SDI       +Q+  G YH+L +S 
Sbjct: 105 VYAWGLDSDGQLGLLGS-----EECIRVPRNIKSLSDI-----QIVQVACGYYHSLALSK 154

Query: 129 SS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTC 187
           +S VFS G +  G LG G +  +  S   I   +    +QV+A   H+  +  SG +F  
Sbjct: 155 ASEVFSWGQNKYGQLGLGIDCNKQASPQLIKSLTGIPFMQVAAGGAHSFVLTLSGAIFGW 214

Query: 188 GDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQ 247
           G N     G  D N   + P L+++L+      +  G + T  LT  G V T G+  +GQ
Sbjct: 215 GRNKFGQLGLNDENDR-YVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQ 273

Query: 248 LGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVVYSFGSGSNFCLGHGE 305
           LGH  T     P+ +   E +GS+V QIA G  +  A V  +G +YSFG G N  LG G 
Sbjct: 274 LGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGS 331

Query: 306 QHDELQPRAIQ 316
             +   P  ++
Sbjct: 332 TSNRKSPFTVK 342


>gi|355562563|gb|EHH19157.1| hypothetical protein EGK_19807 [Macaca mulatta]
          Length = 1054

 Score =  128 bits (321), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 89/276 (32%), Positives = 142/276 (51%), Gaps = 10/276 (3%)

Query: 204 IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 263
           +  PR  +       + V  GL  T F+   G V+TCG N  GQLGH  +  R  P+ + 
Sbjct: 22  VLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKS--RKKPEQVV 79

Query: 264 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH-GEQHDELQPRAIQTFRRKG 322
            L+   ++V ++ G ++ LA+   G VY++G  S+  LG  G +     PR I++     
Sbjct: 80  ALD-AQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSL--SD 136

Query: 323 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK-TLPEPLSSLKSHLAVQVC 381
           I +++V+ G  H +AL  +  V+ WG+   G LG G +  K T P+ + SL     +QV 
Sbjct: 137 IQIIQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQVA 196

Query: 382 ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYH 441
           A    +FVL  +G+++G+G   FG LG  D   +D+ + P +L SLR+  +  I  G  H
Sbjct: 197 AGGAHSFVLTLSGAIFGWGRNKFGQLGLNDE--NDRYV-PNLLKSLRSQKIVYICCGEDH 253

Query: 442 TVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF 477
           T  +T  G +F FG     QLGH++    + P ++F
Sbjct: 254 TAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVF 289



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 104/333 (31%), Positives = 153/333 (45%), Gaps = 13/333 (3%)

Query: 135 GSSLCGVLGHGPETTQCVSFTRI-NFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSF 193
           G++  G LG G    + V   R  +F     V  V     H  FVL  G V+TCG N   
Sbjct: 5   GNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLG 64

Query: 194 CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGH-GD 252
             GH  + +   +P  V AL       V+ G   T  L  +G V+  G ++ GQLG  G 
Sbjct: 65  QLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGS 121

Query: 253 TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ-HDELQ 311
                 P++I  L ++  ++Q+A G  + LA++    V+ +G      LG G     +  
Sbjct: 122 EECIRVPRNIKSLSDI-QIIQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTS 180

Query: 312 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSS 371
           P+ I++    GI  ++V+AG  H   L  SG ++ WG+   G LG  DE D+ +P  L S
Sbjct: 181 PQLIKSLL--GIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKS 238

Query: 372 LKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHH 431
           L+S   V +C  +  T  L   G V+ FG  G+G LG      +   + PR +  L    
Sbjct: 239 LRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG---HNSTSHEINPRKVFELMGSI 295

Query: 432 VSQISTGLYHT-VVVTDRGRLFGFGDNERAQLG 463
           V+QI+ G  HT   V   GR++ FG     QLG
Sbjct: 296 VTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 80/291 (27%), Positives = 138/291 (47%), Gaps = 8/291 (2%)

Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 179
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V VS  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVSCGEAHTLALN 100

Query: 180 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 239
             GQV+  G +S    G   +   I  PR +++L  +   QV  G   +  L+    V  
Sbjct: 101 DKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIIQVACGYYHSLALSKASEVFC 160

Query: 240 CGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
            G N +GQLG G D   + +P+ I  L  +   +Q+AAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKYGQLGLGTDCKKQTSPQLIKSLLGI-PFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 299 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 358
             LG  +++D   P  +++ R + I  V +  G++H  AL   G V+T+G G  G LGH 
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRSQKI--VYICCGEDHTAALTKEGGVFTFGAGGYGQLGHN 277

Query: 359 DEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLG 408
               +  P  +  L   +  Q+ C R+  +  +  +G +Y FG  G G LG
Sbjct: 278 STSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  101 bits (252), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 83/274 (30%), Positives = 132/274 (48%), Gaps = 10/274 (3%)

Query: 98  QSVEHSSDIVETSAGNM-QITTGRYHTLLISNS-SVFSCGSSLCGVLGH-GPETTQCVSF 154
           +S +    +V   A N+  ++ G  HTL +++   V++ G    G LG  G E  +C+  
Sbjct: 70  KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSE--ECIRV 127

Query: 155 TR-INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEAL 213
            R I   S   ++QV+    H+  + ++ +VF  G N     G     +    P+L+++L
Sbjct: 128 PRNIKSLSDIQIIQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLIKSL 187

Query: 214 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
            G+P  QV AG   +  LT+ G +   G N  GQLG  D  DR  P  +  L     +V 
Sbjct: 188 LGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRS-QKIVY 246

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           I  G  +  A+T  G V++FG+G    LGH     E+ PR +  F   G  V +++ G +
Sbjct: 247 ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQ 304

Query: 334 HVVA-LDSSGYVYTWGKGYCGALGHGDEIDKTLP 366
           H  A + SSG +Y++G G  G LG G   ++  P
Sbjct: 305 HTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338



 Score = 81.6 bits (200), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 77/251 (30%), Positives = 119/251 (47%), Gaps = 17/251 (6%)

Query: 70  IYA-GMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLISN 128
           +YA G+  + Q+ LL       +  +R  ++++  SDI       +Q+  G YH+L +S 
Sbjct: 105 VYAWGLDSDGQLGLLGS-----EECIRVPRNIKSLSDI-----QIIQVACGYYHSLALSK 154

Query: 129 SS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTC 187
           +S VF  G +  G LG G +  +  S   I        +QV+A   H+  +  SG +F  
Sbjct: 155 ASEVFCWGQNKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGW 214

Query: 188 GDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQ 247
           G N     G  D N   + P L+++L+      +  G + T  LT  G V T G+  +GQ
Sbjct: 215 GRNKFGQLGLNDENDR-YVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQ 273

Query: 248 LGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVVYSFGSGSNFCLGHGE 305
           LGH  T     P+ +   E +GS+V QIA G  +  A V  +G +YSFG G N  LG G 
Sbjct: 274 LGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGS 331

Query: 306 QHDELQPRAIQ 316
             +   P  ++
Sbjct: 332 TSNRKSPFTVK 342


>gi|355778100|gb|EHH63136.1| hypothetical protein EGM_16043 [Macaca fascicularis]
          Length = 4862

 Score =  128 bits (321), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 102/339 (30%), Positives = 166/339 (48%), Gaps = 17/339 (5%)

Query: 115  QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQV---SA 170
            Q+  G+  T +I +N +V +CG    G LG G      V  T I+      V Q+     
Sbjct: 4031 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHV-LTVISALQGFVVTQLVTSCG 4089

Query: 171  SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
            S+ H+  + +SG+VF+ GD      GH +++R   RPR +EAL+G    Q++ G   +  
Sbjct: 4090 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQMSCGFKHSAV 4148

Query: 231  LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSVVQIAAGPSYMLAVTGNG 288
            +T  G + T G+  +G+LG G+T ++  P+ +  LE  ++G   Q+A G ++ LAV+ +G
Sbjct: 4149 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIG---QVACGLNHTLAVSADG 4205

Query: 289  -VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 347
             +V++FG G    LG G    +  P+ I      GI + +V+ G +  VAL   G+VYT+
Sbjct: 4206 SMVWAFGDGDYGKLGLGNSTAKSSPQKIDVL--CGIGIKKVACGTQFSVALTKDGHVYTF 4263

Query: 348  GKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSL 407
            G+     L  G   +   P+ +  L   +   V      T  L   G VY +G    G L
Sbjct: 4264 GQDRLIGLPEGRARNHNRPQQIPVLAGMIIEDVAVGAEHTLALASNGDVYAWGSNSEGQL 4323

Query: 408  GFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT 446
            G    G ++ V  P ++  L+  ++ QIS G  H+   T
Sbjct: 4324 GL---GHTNHVREPTLVTGLQGKNIRQISAGRCHSAAWT 4359



 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 90/315 (28%), Positives = 144/315 (45%), Gaps = 25/315 (7%)

Query: 160 PSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTN------RPIFRPRLVEAL 213
           PS +    + A +     +   G V  CG  S    G  D+N      +  F P    ++
Sbjct: 400 PSFSDAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPH--RSI 457

Query: 214 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
           K V   + + G   T   T  G V + G   +G+LGHG++  +  PK I    +   VV 
Sbjct: 458 KKVSSSKGSDG--HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVC 515

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           ++AG  +  AVT +G +Y++G G    LGHG+ +     R I T  +   +V  VS G  
Sbjct: 516 VSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNS----RNIPTLVKDISNVGEVSCGSS 571

Query: 334 HVVALDSSGY-VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVD 392
           H +AL   G  V+++G G  G LGHGD      P+ + +L+     +VCA  + +  L  
Sbjct: 572 HTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTS 631

Query: 393 TGSVYGFG---WMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRG 449
           TG VY +G    +G GS            LRP++++ L A  +  +S G  H + ++   
Sbjct: 632 TGQVYAWGCGACLGCGS-------SEATALRPKLIEELAATRIVDVSIGDSHCLALSHDN 684

Query: 450 RLFGFGDNERAQLGH 464
            ++ +G+N   Q G 
Sbjct: 685 EVYAWGNNSMGQCGQ 699



 Score = 98.6 bits (244), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 91/266 (34%), Positives = 128/266 (48%), Gaps = 14/266 (5%)

Query: 122 HTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
           HTL   +   VFS G    G LGHG  +TQ              VV VSA   H+A V +
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528

Query: 181 SGQVFTCGDNSSFCCGHRDTN-RPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH-VH 238
            G+++T G+      GH D+N R I  P LV+ +  V   +V+ G + T  L+  G  V 
Sbjct: 529 DGELYTWGEGDFGRLGHGDSNSRNI--PTLVKDISNV--GEVSCGSSHTIALSKDGRTVW 584

Query: 239 TCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
           + G   +G+LGHGDT     PK I  L+ +  + ++ AG    LA+T  G VY++G G+ 
Sbjct: 585 SFGGGDNGKLGHGDTNRVYKPKVIEALQGM-FIRKVCAGSQSSLALTSTGQVYAWGCGA- 642

Query: 299 FCLGHG-EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 357
            CLG G  +   L+P+ I+        +V VS GD H +AL     VY WG    G  G 
Sbjct: 643 -CLGCGSSEATALRPKLIEEL--AATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQ 699

Query: 358 GDEIDK-TLPEPLSSLKSHLAVQVCA 382
           G+     T P+ +S L      Q+ A
Sbjct: 700 GNSTGPITKPKKVSGLDGIAIQQISA 725



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 87/320 (27%), Positives = 148/320 (46%), Gaps = 13/320 (4%)

Query: 160  PSAAHVVQVSASENHAAFVLQS-GQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPC 218
            PS +   QV   +N   FV+Q+ G V  CG+ S    G  +++  +    ++ AL+G   
Sbjct: 4024 PSFSQAQQVICGQN-CTFVIQANGTVLACGEGSYGRLGQGNSDD-LHVLTVISALQGFVV 4081

Query: 219  KQVTAGLNFTGF---LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA 275
             Q+       G    LT  G V + G   +G+LGHG++  +  P+ I  L+    VVQ++
Sbjct: 4082 TQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQG-EEVVQMS 4140

Query: 276  AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHV 335
             G  +   VT +G +++FG+G    LG G   ++  P  +     +G  + +V+ G  H 
Sbjct: 4141 CGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTAL--EGYQIGQVACGLNHT 4198

Query: 336  VALDSSG-YVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 394
            +A+ + G  V+ +G G  G LG G+   K+ P+ +  L      +V    + +  L   G
Sbjct: 4199 LAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDG 4258

Query: 395  SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 454
             VY FG      +G P+ G +    RP+ +  L    +  ++ G  HT+ +   G ++ +
Sbjct: 4259 HVYTFGQDRL--IGLPE-GRARNHNRPQQIPVLAGMIIEDVAVGAEHTLALASNGDVYAW 4315

Query: 455  GDNERAQLGHDTLRGCLEPT 474
            G N   QLG        EPT
Sbjct: 4316 GSNSEGQLGLGHTNHVREPT 4335



 Score = 84.7 bits (208), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 68/230 (29%), Positives = 108/230 (46%), Gaps = 11/230 (4%)

Query: 237  VHTCGSNTHGQLGH-GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 295
            V+  G+  HGQL   G  +  P   + AP        Q+  G +    +  NG V + G 
Sbjct: 3999 VYLWGAGRHGQLAEAGRNVMVP---AAAP--SFSQAQQVICGQNCTFVIQANGTVLACGE 4053

Query: 296  GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG-DEHVVALDSSGYVYTWGKGYCGA 354
            GS   LG G   D      I   +   +  +  S G D H +AL  SG V++WG G  G 
Sbjct: 4054 GSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGK 4113

Query: 355  LGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGV 414
            LGHG+   +  P  + +L+    VQ+    + + V+   G ++ FG   +G LG  +   
Sbjct: 4114 LGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN--T 4171

Query: 415  SDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRL-FGFGDNERAQLG 463
            S+K L P  + +L  + + Q++ GL HT+ V+  G + + FGD +  +LG
Sbjct: 4172 SNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLG 4220



 Score = 59.7 bits (143), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 49/180 (27%), Positives = 82/180 (45%), Gaps = 13/180 (7%)

Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 349
           VY +GS S+  L  G Q   LQP+   +F         + AG      + + G V   GK
Sbjct: 374 VYVWGSNSSHQLVEGTQEKILQPKLAPSFS----DAQTIEAGQYCTFVISTDGSVRACGK 429

Query: 350 GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKR----KTFVLVDTGSVYGFGWMGFG 405
           G  G LG GD  +++  + L + + H +++  +  +     T      G V+ +G   +G
Sbjct: 430 GSYGRLGLGDSNNQSTLKKL-TFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYG 488

Query: 406 SLGFPDRGVSDKVLRPRILD-SLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 464
            LG    G S     P+++   L+   V  +S G  H+  VT+ G L+ +G+ +  +LGH
Sbjct: 489 KLG---HGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGH 545



 Score = 49.3 bits (116), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 29/100 (29%), Positives = 48/100 (48%), Gaps = 2/100 (2%)

Query: 125 LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQV 184
           L S   V++ G   C  LG G      +    I   +A  +V VS  ++H   +    +V
Sbjct: 629 LTSTGQVYAWGCGAC--LGCGSSEATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEV 686

Query: 185 FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           +  G+NS   CG  ++  PI +P+ V  L G+  +Q++AG
Sbjct: 687 YAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAG 726



 Score = 48.9 bits (115), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 41/143 (28%), Positives = 67/143 (46%), Gaps = 9/143 (6%)

Query: 344  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 403
            VY WG G  G L    E  + +  P ++     A QV   +  TFV+   G+V   G   
Sbjct: 3999 VYLWGAGRHGQLA---EAGRNVMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGS 4055

Query: 404  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLY---HTVVVTDRGRLFGFGDNERA 460
            +G LG   +G SD +    ++ +L+   V+Q+ T      H++ +T+ G +F +GD +  
Sbjct: 4056 YGRLG---QGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYG 4112

Query: 461  QLGHDTLRGCLEPTEIFIQEMEE 483
            +LGH        P +I   + EE
Sbjct: 4113 KLGHGNSDRQRRPRQIEALQGEE 4135


>gi|402880675|ref|XP_003903923.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
           [Papio anubis]
          Length = 1049

 Score =  128 bits (321), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 89/276 (32%), Positives = 142/276 (51%), Gaps = 10/276 (3%)

Query: 204 IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 263
           +  PR  +       + V  GL  T F+   G V+TCG N  GQLGH  +  R  P+ + 
Sbjct: 22  VLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKS--RKKPEQVV 79

Query: 264 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH-GEQHDELQPRAIQTFRRKG 322
            L+   ++V ++ G ++ LA+   G VY++G  S+  LG  G +     PR I++     
Sbjct: 80  ALD-AQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSL--SD 136

Query: 323 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK-TLPEPLSSLKSHLAVQVC 381
           I +++V+ G  H +AL  +  V+ WG+   G LG G +  K T P+ + SL     +QV 
Sbjct: 137 IQIIQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQVA 196

Query: 382 ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYH 441
           A    +FVL  +G+++G+G   FG LG  D   +D+ + P +L SLR+  +  I  G  H
Sbjct: 197 AGGAHSFVLTLSGAIFGWGRNKFGQLGLNDE--NDRYV-PNLLKSLRSQKIVYICCGEDH 253

Query: 442 TVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF 477
           T  +T  G +F FG     QLGH++    + P ++F
Sbjct: 254 TAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVF 289



 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 104/333 (31%), Positives = 153/333 (45%), Gaps = 13/333 (3%)

Query: 135 GSSLCGVLGHGPETTQCVSFTRI-NFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSF 193
           G++  G LG G    + V   R  +F     V  V     H  FVL  G V+TCG N   
Sbjct: 5   GNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLG 64

Query: 194 CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGH-GD 252
             GH  + +   +P  V AL       V+ G   T  L  +G V+  G ++ GQLG  G 
Sbjct: 65  QLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGS 121

Query: 253 TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ-HDELQ 311
                 P++I  L ++  ++Q+A G  + LA++    V+ +G      LG G     +  
Sbjct: 122 EECIRVPRNIKSLSDI-QIIQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTS 180

Query: 312 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSS 371
           P+ I++    GI  ++V+AG  H   L  SG ++ WG+   G LG  DE D+ +P  L S
Sbjct: 181 PQLIKSLL--GIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKS 238

Query: 372 LKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHH 431
           L+S   V +C  +  T  L   G V+ FG  G+G LG      +   + PR +  L    
Sbjct: 239 LRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG---HNSTSHEINPRKVFELMGSI 295

Query: 432 VSQISTGLYHT-VVVTDRGRLFGFGDNERAQLG 463
           V+QI+ G  HT   V   GR++ FG     QLG
Sbjct: 296 VTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 80/291 (27%), Positives = 138/291 (47%), Gaps = 8/291 (2%)

Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 179
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V VS  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVSCGEAHTLALN 100

Query: 180 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 239
             GQV+  G +S    G   +   I  PR +++L  +   QV  G   +  L+    V  
Sbjct: 101 DKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIIQVACGYYHSLALSKASEVFC 160

Query: 240 CGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
            G N +GQLG G D   + +P+ I  L  +   +Q+AAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKYGQLGLGTDCKKQTSPQLIKSLLGI-PFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 299 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 358
             LG  +++D   P  +++ R + I  V +  G++H  AL   G V+T+G G  G LGH 
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRSQKI--VYICCGEDHTAALTKEGGVFTFGAGGYGQLGHN 277

Query: 359 DEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLG 408
               +  P  +  L   +  Q+ C R+  +  +  +G +Y FG  G G LG
Sbjct: 278 STSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  101 bits (252), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 83/274 (30%), Positives = 132/274 (48%), Gaps = 10/274 (3%)

Query: 98  QSVEHSSDIVETSAGNM-QITTGRYHTLLISNS-SVFSCGSSLCGVLGH-GPETTQCVSF 154
           +S +    +V   A N+  ++ G  HTL +++   V++ G    G LG  G E  +C+  
Sbjct: 70  KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSE--ECIRV 127

Query: 155 TR-INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEAL 213
            R I   S   ++QV+    H+  + ++ +VF  G N     G     +    P+L+++L
Sbjct: 128 PRNIKSLSDIQIIQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLIKSL 187

Query: 214 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
            G+P  QV AG   +  LT+ G +   G N  GQLG  D  DR  P  +  L     +V 
Sbjct: 188 LGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRS-QKIVY 246

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           I  G  +  A+T  G V++FG+G    LGH     E+ PR +  F   G  V +++ G +
Sbjct: 247 ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQ 304

Query: 334 HVVA-LDSSGYVYTWGKGYCGALGHGDEIDKTLP 366
           H  A + SSG +Y++G G  G LG G   ++  P
Sbjct: 305 HTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338



 Score = 81.3 bits (199), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 77/251 (30%), Positives = 119/251 (47%), Gaps = 17/251 (6%)

Query: 70  IYA-GMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLISN 128
           +YA G+  + Q+ LL       +  +R  ++++  SDI       +Q+  G YH+L +S 
Sbjct: 105 VYAWGLDSDGQLGLLGS-----EECIRVPRNIKSLSDI-----QIIQVACGYYHSLALSK 154

Query: 129 SS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTC 187
           +S VF  G +  G LG G +  +  S   I        +QV+A   H+  +  SG +F  
Sbjct: 155 ASEVFCWGQNKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGW 214

Query: 188 GDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQ 247
           G N     G  D N   + P L+++L+      +  G + T  LT  G V T G+  +GQ
Sbjct: 215 GRNKFGQLGLNDENDR-YVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQ 273

Query: 248 LGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVVYSFGSGSNFCLGHGE 305
           LGH  T     P+ +   E +GS+V QIA G  +  A V  +G +YSFG G N  LG G 
Sbjct: 274 LGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGS 331

Query: 306 QHDELQPRAIQ 316
             +   P  ++
Sbjct: 332 TSNRKSPFTVK 342


>gi|301756863|ref|XP_002914279.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like
            [Ailuropoda melanoleuca]
          Length = 4861

 Score =  128 bits (321), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 103/339 (30%), Positives = 167/339 (49%), Gaps = 17/339 (5%)

Query: 115  QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQV---SA 170
            Q+  G+  T +I +N +V +CG    G LG G      V  T I+      V Q+     
Sbjct: 4031 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHV-LTVISALQGFVVTQLVTSCG 4089

Query: 171  SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
            S+ H+  + +SG+VF+ GD      GH +++R   RPR +EAL+G    Q++ G   +  
Sbjct: 4090 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQMSCGFKHSAV 4148

Query: 231  LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSVVQIAAGPSYMLAVTGNG 288
            +T  G + T G+  +G+LG G+T ++  P+ +  LE  ++G   Q+A G ++ LAV+ +G
Sbjct: 4149 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIG---QVACGLNHTLAVSADG 4205

Query: 289  -VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 347
             +V++FG G    LG G    +  P+ +      GI + +V+ G +  VAL   G+VYT+
Sbjct: 4206 SMVWAFGDGDYGKLGLGNSTAKSSPQKVDVL--CGIGIKKVACGTQFSVALTKDGHVYTF 4263

Query: 348  GKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSL 407
            G+     L  G   +   P+ +  L   +   V      T  L  TG VY +G    G L
Sbjct: 4264 GQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQL 4323

Query: 408  GFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT 446
            G    G ++ V  P ++  L+  +V QIS G  H+   T
Sbjct: 4324 GL---GHTNHVREPTLVTVLQGKNVRQISAGRCHSAAWT 4359



 Score =  109 bits (273), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 106/379 (27%), Positives = 165/379 (43%), Gaps = 29/379 (7%)

Query: 96  FLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFT 155
           F +    +SD   T A    I TG    ++     V+  GS+    L  G   TQ     
Sbjct: 340 FEEVCRMASDYSRTCASPDSIQTGDA-PIVSETCEVYVWGSNSSHQLVEG---TQEKILQ 395

Query: 156 RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTN------RPIFRPRL 209
               PS +    + A +     +   G V  CG  S    G  D+N      +  F P  
Sbjct: 396 PKLAPSFSDAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPH- 454

Query: 210 VEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG 269
             ++K V   + + G   T   T  G V + G   +G+LGHG++  +  PK I    +  
Sbjct: 455 -RSIKKVSSSKGSDG--HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGK 511

Query: 270 SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS 329
            VV ++AG  +  AVT +G +Y++G G    LGHG+ +     R I T  +   +V  VS
Sbjct: 512 VVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNS----RNIPTLVKDISNVGEVS 567

Query: 330 AGDEHVVALDSSGY-VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTF 388
            G  H +AL   G  V+++G G  G LGHGD      P+ + +L+     +VCA  + + 
Sbjct: 568 CGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVVEALQGMFIRKVCAGSQSSL 627

Query: 389 VLVDTGSVYGFG---WMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVV 445
            L  TG VY +G    +G GS            LRP++++ L A  +  IS G  H + +
Sbjct: 628 ALTSTGQVYAWGCGACLGCGS-------SEATALRPKLIEELAATRIVDISIGDSHCLAL 680

Query: 446 TDRGRLFGFGDNERAQLGH 464
           +    ++ +G+N   Q G 
Sbjct: 681 SHDNEVYAWGNNSMGQCGQ 699



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 91/267 (34%), Positives = 130/267 (48%), Gaps = 16/267 (5%)

Query: 122 HTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ-VSASENHAAFVL 179
           HTL   +   VFS G    G LGHG  +TQ      I  P    VV  VSA   H+A V 
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYP-KLIQGPLQGKVVVCVSAGYRHSAAVT 527

Query: 180 QSGQVFTCGDNSSFCCGHRDTN-RPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH-V 237
           + G+++T G+      GH D+N R I  P LV+ +  V   +V+ G + T  L+  G  V
Sbjct: 528 EDGELYTWGEGDFGRLGHGDSNSRNI--PTLVKDISNV--GEVSCGSSHTIALSKDGRTV 583

Query: 238 HTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 297
            + G   +G+LGHGDT     PK +  L+ +  + ++ AG    LA+T  G VY++G G+
Sbjct: 584 WSFGGGDNGKLGHGDTNRVYKPKVVEALQGM-FIRKVCAGSQSSLALTSTGQVYAWGCGA 642

Query: 298 NFCLGHG-EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 356
             CLG G  +   L+P+ I+        +V +S GD H +AL     VY WG    G  G
Sbjct: 643 --CLGCGSSEATALRPKLIEEL--AATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCG 698

Query: 357 HGDEIDK-TLPEPLSSLKSHLAVQVCA 382
            G+     T P+ +S L      Q+ A
Sbjct: 699 QGNSTGPITKPKKVSGLDGIAIQQISA 725



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 87/324 (26%), Positives = 150/324 (46%), Gaps = 13/324 (4%)

Query: 160  PSAAHVVQVSASENHAAFVLQS-GQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPC 218
            PS +   QV   +N   FV+Q+ G V  CG+ S    G  +++  +    ++ AL+G   
Sbjct: 4024 PSFSQAQQVICGQN-CTFVIQANGTVLACGEGSYGRLGQGNSDD-LHVLTVISALQGFVV 4081

Query: 219  KQVTAGLNFTGF---LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA 275
             Q+       G    LT  G V + G   +G+LGHG++  +  P+ I  L+    VVQ++
Sbjct: 4082 TQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQG-EEVVQMS 4140

Query: 276  AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHV 335
             G  +   VT +G +++FG+G    LG G   ++  P  +     +G  + +V+ G  H 
Sbjct: 4141 CGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTAL--EGYQIGQVACGLNHT 4198

Query: 336  VALDSSG-YVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 394
            +A+ + G  V+ +G G  G LG G+   K+ P+ +  L      +V    + +  L   G
Sbjct: 4199 LAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDG 4258

Query: 395  SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 454
             VY FG      +G P+ G +    RP+ +  L    +  ++ G  HT+ +   G ++ +
Sbjct: 4259 HVYTFGQDRL--IGLPE-GRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAW 4315

Query: 455  GDNERAQLGHDTLRGCLEPTEIFI 478
            G N   QLG        EPT + +
Sbjct: 4316 GSNSEGQLGLGHTNHVREPTLVTV 4339



 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 68/230 (29%), Positives = 108/230 (46%), Gaps = 11/230 (4%)

Query: 237  VHTCGSNTHGQLGH-GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 295
            V+  G+  HGQL   G  +  P   + AP        Q+  G +    +  NG V + G 
Sbjct: 3999 VYLWGAGRHGQLAEAGRNVMVP---AAAP--SFSQAQQVICGQNCTFVIQANGTVLACGE 4053

Query: 296  GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG-DEHVVALDSSGYVYTWGKGYCGA 354
            GS   LG G   D      I   +   +  +  S G D H +AL  SG V++WG G  G 
Sbjct: 4054 GSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGK 4113

Query: 355  LGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGV 414
            LGHG+   +  P  + +L+    VQ+    + + V+   G ++ FG   +G LG  +   
Sbjct: 4114 LGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN--T 4171

Query: 415  SDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRL-FGFGDNERAQLG 463
            S+K L P  + +L  + + Q++ GL HT+ V+  G + + FGD +  +LG
Sbjct: 4172 SNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLG 4220



 Score = 48.9 bits (115), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 41/143 (28%), Positives = 67/143 (46%), Gaps = 9/143 (6%)

Query: 344  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 403
            VY WG G  G L    E  + +  P ++     A QV   +  TFV+   G+V   G   
Sbjct: 3999 VYLWGAGRHGQLA---EAGRNVMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGS 4055

Query: 404  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLY---HTVVVTDRGRLFGFGDNERA 460
            +G LG   +G SD +    ++ +L+   V+Q+ T      H++ +T+ G +F +GD +  
Sbjct: 4056 YGRLG---QGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYG 4112

Query: 461  QLGHDTLRGCLEPTEIFIQEMEE 483
            +LGH        P +I   + EE
Sbjct: 4113 KLGHGNSDRQRRPRQIEALQGEE 4135



 Score = 48.9 bits (115), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 28/100 (28%), Positives = 48/100 (48%), Gaps = 2/100 (2%)

Query: 125 LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQV 184
           L S   V++ G   C  LG G      +    I   +A  +V +S  ++H   +    +V
Sbjct: 629 LTSTGQVYAWGCGAC--LGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEV 686

Query: 185 FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           +  G+NS   CG  ++  PI +P+ V  L G+  +Q++AG
Sbjct: 687 YAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAG 726


>gi|383411601|gb|AFH29014.1| putative E3 ubiquitin-protein ligase HERC4 isoform b [Macaca
           mulatta]
          Length = 1049

 Score =  128 bits (321), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 89/276 (32%), Positives = 142/276 (51%), Gaps = 10/276 (3%)

Query: 204 IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 263
           +  PR  +       + V  GL  T F+   G V+TCG N  GQLGH  +  R  P+ + 
Sbjct: 22  VLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKS--RKKPEQVV 79

Query: 264 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH-GEQHDELQPRAIQTFRRKG 322
            L+   ++V ++ G ++ LA+   G VY++G  S+  LG  G +     PR I++     
Sbjct: 80  ALD-AQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSL--SD 136

Query: 323 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK-TLPEPLSSLKSHLAVQVC 381
           I +++V+ G  H +AL  +  V+ WG+   G LG G +  K T P+ + SL     +QV 
Sbjct: 137 IQIIQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQVA 196

Query: 382 ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYH 441
           A    +FVL  +G+++G+G   FG LG  D   +D+ + P +L SLR+  +  I  G  H
Sbjct: 197 AGGAHSFVLTLSGAIFGWGRNKFGQLGLNDE--NDRYV-PNLLKSLRSQKIVYICCGEDH 253

Query: 442 TVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF 477
           T  +T  G +F FG     QLGH++    + P ++F
Sbjct: 254 TAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVF 289



 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 104/333 (31%), Positives = 153/333 (45%), Gaps = 13/333 (3%)

Query: 135 GSSLCGVLGHGPETTQCVSFTRI-NFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSF 193
           G++  G LG G    + V   R  +F     V  V     H  FVL  G V+TCG N   
Sbjct: 5   GNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLG 64

Query: 194 CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGH-GD 252
             GH  + +   +P  V AL       V+ G   T  L  +G V+  G ++ GQLG  G 
Sbjct: 65  QLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGS 121

Query: 253 TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ-HDELQ 311
                 P++I  L ++  ++Q+A G  + LA++    V+ +G      LG G     +  
Sbjct: 122 EECIRVPRNIKSLSDI-QIIQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTS 180

Query: 312 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSS 371
           P+ I++    GI  ++V+AG  H   L  SG ++ WG+   G LG  DE D+ +P  L S
Sbjct: 181 PQLIKSLL--GIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKS 238

Query: 372 LKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHH 431
           L+S   V +C  +  T  L   G V+ FG  G+G LG      +   + PR +  L    
Sbjct: 239 LRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG---HNSTSHEINPRKVFELMGSI 295

Query: 432 VSQISTGLYHT-VVVTDRGRLFGFGDNERAQLG 463
           V+QI+ G  HT   V   GR++ FG     QLG
Sbjct: 296 VTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 80/291 (27%), Positives = 138/291 (47%), Gaps = 8/291 (2%)

Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 179
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V VS  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVSCGEAHTLALN 100

Query: 180 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 239
             GQV+  G +S    G   +   I  PR +++L  +   QV  G   +  L+    V  
Sbjct: 101 DKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIIQVACGYYHSLALSKASEVFC 160

Query: 240 CGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
            G N +GQLG G D   + +P+ I  L  +   +Q+AAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKYGQLGLGTDCKKQTSPQLIKSLLGI-PFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 299 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 358
             LG  +++D   P  +++ R + I  V +  G++H  AL   G V+T+G G  G LGH 
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRSQKI--VYICCGEDHTAALTKEGGVFTFGAGGYGQLGHN 277

Query: 359 DEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLG 408
               +  P  +  L   +  Q+ C R+  +  +  +G +Y FG  G G LG
Sbjct: 278 STSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  101 bits (251), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 83/274 (30%), Positives = 132/274 (48%), Gaps = 10/274 (3%)

Query: 98  QSVEHSSDIVETSAGNM-QITTGRYHTLLISNS-SVFSCGSSLCGVLGH-GPETTQCVSF 154
           +S +    +V   A N+  ++ G  HTL +++   V++ G    G LG  G E  +C+  
Sbjct: 70  KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSE--ECIRV 127

Query: 155 TR-INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEAL 213
            R I   S   ++QV+    H+  + ++ +VF  G N     G     +    P+L+++L
Sbjct: 128 PRNIKSLSDIQIIQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLIKSL 187

Query: 214 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
            G+P  QV AG   +  LT+ G +   G N  GQLG  D  DR  P  +  L     +V 
Sbjct: 188 LGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRS-QKIVY 246

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           I  G  +  A+T  G V++FG+G    LGH     E+ PR +  F   G  V +++ G +
Sbjct: 247 ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQ 304

Query: 334 HVVA-LDSSGYVYTWGKGYCGALGHGDEIDKTLP 366
           H  A + SSG +Y++G G  G LG G   ++  P
Sbjct: 305 HTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338



 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 77/251 (30%), Positives = 119/251 (47%), Gaps = 17/251 (6%)

Query: 70  IYA-GMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLISN 128
           +YA G+  + Q+ LL       +  +R  ++++  SDI       +Q+  G YH+L +S 
Sbjct: 105 VYAWGLDSDGQLGLLGS-----EECIRVPRNIKSLSDI-----QIIQVACGYYHSLALSK 154

Query: 129 SS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTC 187
           +S VF  G +  G LG G +  +  S   I        +QV+A   H+  +  SG +F  
Sbjct: 155 ASEVFCWGQNKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGW 214

Query: 188 GDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQ 247
           G N     G  D N   + P L+++L+      +  G + T  LT  G V T G+  +GQ
Sbjct: 215 GRNKFGQLGLNDENDR-YVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQ 273

Query: 248 LGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVVYSFGSGSNFCLGHGE 305
           LGH  T     P+ +   E +GS+V QIA G  +  A V  +G +YSFG G N  LG G 
Sbjct: 274 LGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGS 331

Query: 306 QHDELQPRAIQ 316
             +   P  ++
Sbjct: 332 TSNRKSPFTVK 342


>gi|395502621|ref|XP_003755677.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Sarcophilus
            harrisii]
          Length = 4865

 Score =  128 bits (321), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 102/339 (30%), Positives = 167/339 (49%), Gaps = 17/339 (5%)

Query: 115  QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQV---SA 170
            Q+  G+  T +I +N +V +CG    G LG G      V  T I+      V Q+     
Sbjct: 4035 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHV-LTVISALQGFVVTQLVTSCG 4093

Query: 171  SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
            S+ H+  + +SG+VF+ GD      GH +++R   RPR +EAL+G    Q++ G   +  
Sbjct: 4094 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVIQMSCGFKHSAV 4152

Query: 231  LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSVVQIAAGPSYMLAVTGNG 288
            +T  G + T G+  +G+LG G+T ++  P+ +  LE  ++G   Q+A G ++ LAV+ +G
Sbjct: 4153 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIG---QVACGLNHTLAVSADG 4209

Query: 289  -VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 347
             +V++FG G    LG G    +  P+ +      GI + +V+ G +  VAL   G+VYT+
Sbjct: 4210 SMVWAFGDGDYGKLGLGNSTAKSSPQKVDVL--CGIGIKKVACGTQFSVALTKDGHVYTF 4267

Query: 348  GKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSL 407
            G+     L  G   +   P+ +  L   +   V      T  L  TG VY +G    G L
Sbjct: 4268 GQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQL 4327

Query: 408  GFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT 446
            G    G ++ V  P ++  L+  ++ QIS G  H+   T
Sbjct: 4328 GL---GHTNHVREPTLITVLQGKNIRQISAGRCHSAAWT 4363



 Score =  108 bits (271), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 90/315 (28%), Positives = 144/315 (45%), Gaps = 25/315 (7%)

Query: 160 PSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTN------RPIFRPRLVEAL 213
           PS +    + A +     +   G V  CG  S    G  D+N      +  F P    ++
Sbjct: 400 PSFSDAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPH--RSI 457

Query: 214 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
           K V   + + G   T   T  G V + G   +G+LGHG++  +  PK I    +   VV 
Sbjct: 458 KKVSSSKGSDG--HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVC 515

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           ++AG  +  AV+ +G +Y++G G    LGHG+ +     R I T  +   +V  VS G  
Sbjct: 516 VSAGYRHSAAVSEDGELYTWGEGDFGRLGHGDSNS----RNIPTLVKDISNVGEVSCGSS 571

Query: 334 HVVALDSSGY-VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVD 392
           H +AL   G  V+++G G  G LGHGD      P+ + +L+     +VCA  + +  L  
Sbjct: 572 HTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTS 631

Query: 393 TGSVYGFG---WMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRG 449
           TG VY +G    +G GS            LRP++++ L A  +  IS G  H + ++   
Sbjct: 632 TGQVYAWGCGACLGCGS-------SEATALRPKLIEELAATRIVDISIGDSHCLALSHDN 684

Query: 450 RLFGFGDNERAQLGH 464
            ++ +G+N   Q G 
Sbjct: 685 EVYAWGNNSMGQCGQ 699



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 92/267 (34%), Positives = 130/267 (48%), Gaps = 16/267 (5%)

Query: 122 HTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ-VSASENHAAFVL 179
           HTL   +   VFS G    G LGHG  +TQ      I  P    VV  VSA   H+A V 
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYP-KLIQGPLQGKVVVCVSAGYRHSAAVS 527

Query: 180 QSGQVFTCGDNSSFCCGHRDTN-RPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH-V 237
           + G+++T G+      GH D+N R I  P LV+ +  V   +V+ G + T  L+  G  V
Sbjct: 528 EDGELYTWGEGDFGRLGHGDSNSRNI--PTLVKDISNV--GEVSCGSSHTIALSKDGRTV 583

Query: 238 HTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 297
            + G   +G+LGHGDT     PK I  L+ +  + ++ AG    LA+T  G VY++G G+
Sbjct: 584 WSFGGGDNGKLGHGDTNRVYKPKVIEALQGM-FIRKVCAGSQSSLALTSTGQVYAWGCGA 642

Query: 298 NFCLGHG-EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 356
             CLG G  +   L+P+ I+        +V +S GD H +AL     VY WG    G  G
Sbjct: 643 --CLGCGSSEATALRPKLIEEL--AATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCG 698

Query: 357 HGDEIDK-TLPEPLSSLKSHLAVQVCA 382
            G+     T P+ +S L      Q+ A
Sbjct: 699 QGNSTGPITKPKKVSGLDGVAIQQISA 725



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 87/324 (26%), Positives = 150/324 (46%), Gaps = 13/324 (4%)

Query: 160  PSAAHVVQVSASENHAAFVLQS-GQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPC 218
            PS +   QV   +N   FV+Q+ G V  CG+ S    G  +++  +    ++ AL+G   
Sbjct: 4028 PSFSQAQQVICGQN-CTFVIQANGTVLACGEGSYGRLGQGNSDD-LHVLTVISALQGFVV 4085

Query: 219  KQVTAGLNFTGF---LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA 275
             Q+       G    LT  G V + G   +G+LGHG++  +  P+ I  L+    V+Q++
Sbjct: 4086 TQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQG-EEVIQMS 4144

Query: 276  AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHV 335
             G  +   VT +G +++FG+G    LG G   ++  P  +     +G  + +V+ G  H 
Sbjct: 4145 CGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTAL--EGYQIGQVACGLNHT 4202

Query: 336  VALDSSG-YVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 394
            +A+ + G  V+ +G G  G LG G+   K+ P+ +  L      +V    + +  L   G
Sbjct: 4203 LAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDG 4262

Query: 395  SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 454
             VY FG      +G P+ G +    RP+ +  L    +  ++ G  HT+ +   G ++ +
Sbjct: 4263 HVYTFGQDRL--IGLPE-GRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAW 4319

Query: 455  GDNERAQLGHDTLRGCLEPTEIFI 478
            G N   QLG        EPT I +
Sbjct: 4320 GSNSEGQLGLGHTNHVREPTLITV 4343



 Score = 84.0 bits (206), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 67/230 (29%), Positives = 108/230 (46%), Gaps = 11/230 (4%)

Query: 237  VHTCGSNTHGQLGH-GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 295
            V+  G+  HGQL   G  +  P   + AP        Q+  G +    +  NG V + G 
Sbjct: 4003 VYLWGAGRHGQLAEAGRNVMIP---AAAP--SFSQAQQVICGQNCTFVIQANGTVLACGE 4057

Query: 296  GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG-DEHVVALDSSGYVYTWGKGYCGA 354
            GS   LG G   D      I   +   +  +  S G D H +AL  SG V++WG G  G 
Sbjct: 4058 GSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGK 4117

Query: 355  LGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGV 414
            LGHG+   +  P  + +L+    +Q+    + + V+   G ++ FG   +G LG  +   
Sbjct: 4118 LGHGNSDRQRRPRQIEALQGEEVIQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN--T 4175

Query: 415  SDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRL-FGFGDNERAQLG 463
            S+K L P  + +L  + + Q++ GL HT+ V+  G + + FGD +  +LG
Sbjct: 4176 SNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLG 4224



 Score = 58.9 bits (141), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 60/233 (25%), Positives = 94/233 (40%), Gaps = 59/233 (25%)

Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAIQTFR------------------------------ 319
           VY +GS S+  L  G Q   LQP+   +F                               
Sbjct: 374 VYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIEAGQYCTFVISTDGSVRACGKGSYG 433

Query: 320 --------------------RKGIHVVRVSAG-DEHVVALDSSGYVYTWGKGYCGALGHG 358
                                + I  V  S G D H +A  + G V++WG G  G LGHG
Sbjct: 434 RLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHG 493

Query: 359 DEIDKTLPEPLS-SLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDK 417
           +   +  P+ +   L+  + V V A  R +  + + G +Y +G   FG LG    G S+ 
Sbjct: 494 NSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVSEDGELYTWGEGDFGRLG---HGDSNS 550

Query: 418 VLRPRILDSLRAHHVSQISTGLYHTVVVTDRGR-LFGFGDNERAQLGH-DTLR 468
              P ++  +   +V ++S G  HT+ ++  GR ++ FG  +  +LGH DT R
Sbjct: 551 RNIPTLVKDI--SNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNR 601



 Score = 49.3 bits (116), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 29/100 (29%), Positives = 48/100 (48%), Gaps = 2/100 (2%)

Query: 125 LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQV 184
           L S   V++ G   C  LG G      +    I   +A  +V +S  ++H   +    +V
Sbjct: 629 LTSTGQVYAWGCGAC--LGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEV 686

Query: 185 FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           +  G+NS   CG  ++  PI +P+ V  L GV  +Q++AG
Sbjct: 687 YAWGNNSMGQCGQGNSTGPITKPKKVSGLDGVAIQQISAG 726



 Score = 48.9 bits (115), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 41/143 (28%), Positives = 67/143 (46%), Gaps = 9/143 (6%)

Query: 344  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 403
            VY WG G  G L    E  + +  P ++     A QV   +  TFV+   G+V   G   
Sbjct: 4003 VYLWGAGRHGQLA---EAGRNVMIPAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGS 4059

Query: 404  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLY---HTVVVTDRGRLFGFGDNERA 460
            +G LG   +G SD +    ++ +L+   V+Q+ T      H++ +T+ G +F +GD +  
Sbjct: 4060 YGRLG---QGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYG 4116

Query: 461  QLGHDTLRGCLEPTEIFIQEMEE 483
            +LGH        P +I   + EE
Sbjct: 4117 KLGHGNSDRQRRPRQIEALQGEE 4139


>gi|410961060|ref|XP_003987103.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein ligase
            HERC1 [Felis catus]
          Length = 4861

 Score =  128 bits (321), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 103/339 (30%), Positives = 167/339 (49%), Gaps = 17/339 (5%)

Query: 115  QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQV---SA 170
            Q+  G+  T +I +N +V +CG    G LG G      V  T I+      V Q+     
Sbjct: 4031 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHV-LTVISALQGFVVTQLVTSCG 4089

Query: 171  SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
            S+ H+  + +SG+VF+ GD      GH +++R   RPR +EAL+G    Q++ G   +  
Sbjct: 4090 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQMSCGFKHSAV 4148

Query: 231  LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSVVQIAAGPSYMLAVTGNG 288
            +T  G + T G+  +G+LG G+T ++  P+ +  LE  ++G   Q+A G ++ LAV+ +G
Sbjct: 4149 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIG---QVACGLNHTLAVSADG 4205

Query: 289  -VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 347
             +V++FG G    LG G    +  P+ +      GI + +V+ G +  VAL   G+VYT+
Sbjct: 4206 SMVWAFGDGDYGKLGLGNSTAKSSPQKVDVL--CGIGIKKVACGTQFSVALTKDGHVYTF 4263

Query: 348  GKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSL 407
            G+     L  G   +   P+ +  L   +   V      T  L  TG VY +G    G L
Sbjct: 4264 GQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQL 4323

Query: 408  GFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT 446
            G    G ++ V  P ++  L+  +V QIS G  H+   T
Sbjct: 4324 GL---GHTNHVREPTLVTVLQGKNVRQISAGRCHSAAWT 4359



 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 108/380 (28%), Positives = 168/380 (44%), Gaps = 31/380 (8%)

Query: 96  FLQSVEHSSDIVETSAGNMQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSF 154
           F +    +SD   T A    I TG   T ++S +  V+  GS+    L  G   TQ    
Sbjct: 340 FEEVCRMASDYSRTCASPDSIQTG--DTPIVSETCEVYVWGSNSSHQLVEG---TQEKIL 394

Query: 155 TRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTN------RPIFRPR 208
                PS +    + A +     +   G V  CG  S    G  D+N      +  F P 
Sbjct: 395 QPKLAPSFSDAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPH 454

Query: 209 LVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEV 268
              ++K V   + + G   T   T  G V + G   +G+LGHG++  +  PK I    + 
Sbjct: 455 --RSIKKVSSSKGSDG--HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQG 510

Query: 269 GSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRV 328
             VV ++AG  +  AVT +G +Y++G G    LGHG+ +     R I T  +   +V  V
Sbjct: 511 KVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNS----RNIPTLVKDISNVGEV 566

Query: 329 SAGDEHVVALDSSGY-VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKT 387
           S G  H +AL   G  V+++G G  G LGHGD      P+ + +L+     +VCA  + +
Sbjct: 567 SCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVVEALQGMFIRKVCAGSQSS 626

Query: 388 FVLVDTGSVYGFG---WMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV 444
             L  TG VY +G    +G GS            LRP++++ L A  +  IS G  H + 
Sbjct: 627 LALTSTGQVYAWGCGACLGCGS-------SEATALRPKLIEELAATRIVDISIGDSHCLA 679

Query: 445 VTDRGRLFGFGDNERAQLGH 464
           ++    ++ +G+N   Q G 
Sbjct: 680 LSHDNEVYAWGNNSMGQCGQ 699



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 87/324 (26%), Positives = 150/324 (46%), Gaps = 13/324 (4%)

Query: 160  PSAAHVVQVSASENHAAFVLQS-GQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPC 218
            PS +   QV   +N   FV+Q+ G V  CG+ S    G  +++  +    ++ AL+G   
Sbjct: 4024 PSFSQAQQVICGQN-CTFVIQANGTVLACGEGSYGRLGQGNSDD-LHVLTVISALQGFVV 4081

Query: 219  KQVTAGLNFTGF---LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA 275
             Q+       G    LT  G V + G   +G+LGHG++  +  P+ I  L+    VVQ++
Sbjct: 4082 TQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQG-EEVVQMS 4140

Query: 276  AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHV 335
             G  +   VT +G +++FG+G    LG G   ++  P  +     +G  + +V+ G  H 
Sbjct: 4141 CGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTAL--EGYQIGQVACGLNHT 4198

Query: 336  VALDSSG-YVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 394
            +A+ + G  V+ +G G  G LG G+   K+ P+ +  L      +V    + +  L   G
Sbjct: 4199 LAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDG 4258

Query: 395  SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 454
             VY FG      +G P+ G +    RP+ +  L    +  ++ G  HT+ +   G ++ +
Sbjct: 4259 HVYTFGQDRL--IGLPE-GRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAW 4315

Query: 455  GDNERAQLGHDTLRGCLEPTEIFI 478
            G N   QLG        EPT + +
Sbjct: 4316 GSNSEGQLGLGHTNHVREPTLVTV 4339



 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 68/230 (29%), Positives = 108/230 (46%), Gaps = 11/230 (4%)

Query: 237  VHTCGSNTHGQLGH-GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 295
            V+  G+  HGQL   G  +  P   + AP        Q+  G +    +  NG V + G 
Sbjct: 3999 VYLWGAGRHGQLAEAGRNVMVP---AAAP--SFSQAQQVICGQNCTFVIQANGTVLACGE 4053

Query: 296  GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG-DEHVVALDSSGYVYTWGKGYCGA 354
            GS   LG G   D      I   +   +  +  S G D H +AL  SG V++WG G  G 
Sbjct: 4054 GSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGK 4113

Query: 355  LGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGV 414
            LGHG+   +  P  + +L+    VQ+    + + V+   G ++ FG   +G LG  +   
Sbjct: 4114 LGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN--T 4171

Query: 415  SDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRL-FGFGDNERAQLG 463
            S+K L P  + +L  + + Q++ GL HT+ V+  G + + FGD +  +LG
Sbjct: 4172 SNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLG 4220



 Score = 48.9 bits (115), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 41/143 (28%), Positives = 67/143 (46%), Gaps = 9/143 (6%)

Query: 344  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 403
            VY WG G  G L    E  + +  P ++     A QV   +  TFV+   G+V   G   
Sbjct: 3999 VYLWGAGRHGQLA---EAGRNVMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGS 4055

Query: 404  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLY---HTVVVTDRGRLFGFGDNERA 460
            +G LG   +G SD +    ++ +L+   V+Q+ T      H++ +T+ G +F +GD +  
Sbjct: 4056 YGRLG---QGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYG 4112

Query: 461  QLGHDTLRGCLEPTEIFIQEMEE 483
            +LGH        P +I   + EE
Sbjct: 4113 KLGHGNSDRQRRPRQIEALQGEE 4135



 Score = 48.9 bits (115), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 28/100 (28%), Positives = 48/100 (48%), Gaps = 2/100 (2%)

Query: 125 LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQV 184
           L S   V++ G   C  LG G      +    I   +A  +V +S  ++H   +    +V
Sbjct: 629 LTSTGQVYAWGCGAC--LGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEV 686

Query: 185 FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           +  G+NS   CG  ++  PI +P+ V  L G+  +Q++AG
Sbjct: 687 YAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAG 726


>gi|426379401|ref|XP_004056386.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Gorilla
            gorilla gorilla]
          Length = 4502

 Score =  128 bits (321), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 103/339 (30%), Positives = 166/339 (48%), Gaps = 17/339 (5%)

Query: 115  QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQV---SA 170
            Q+  G+  T +I +N +V +CG    G LG G      V  T I+      V Q+     
Sbjct: 3672 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHV-LTVISALQGFVVTQLVTSCG 3730

Query: 171  SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
            S+ H+  + +SG+VF+ GD      GH +++R   RPR +EAL+G    Q++ G   +  
Sbjct: 3731 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQMSCGFKHSAV 3789

Query: 231  LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSVVQIAAGPSYMLAVTGNG 288
            +T  G + T G+  +G+LG G+T ++  P+ +  LE  ++G   Q+A G ++ LAV+ +G
Sbjct: 3790 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIG---QVACGLNHTLAVSADG 3846

Query: 289  -VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 347
             +V++FG G    LG G    +  P+ I      GI + +V+ G +  VAL   G+VYT+
Sbjct: 3847 SMVWAFGDGDYGKLGLGNSTAKSSPQKIDVL--CGIGIKKVACGTQFSVALTKDGHVYTF 3904

Query: 348  GKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSL 407
            G+     L  G   +   P+ +  L   +   V      T  L   G VY +G    G L
Sbjct: 3905 GQDRLIGLPEGRARNHNRPQQIPVLAGVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQL 3964

Query: 408  GFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT 446
            G    G ++ V  P ++  L+  +V QIS G  H+   T
Sbjct: 3965 GL---GHTNHVREPTVVTGLQGKNVRQISAGRCHSAAWT 4000



 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 90/315 (28%), Positives = 144/315 (45%), Gaps = 25/315 (7%)

Query: 160 PSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTN------RPIFRPRLVEAL 213
           PS +    + A +     +   G V  CG  S    G  D+N      +  F P    ++
Sbjct: 400 PSFSDAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPH--RSI 457

Query: 214 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
           K V   + + G   T   T  G V + G   +G+LGHG++  +  PK I    +   VV 
Sbjct: 458 KKVSSSKGSDG--HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVC 515

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           ++AG  +  AVT +G +Y++G G    LGHG+ +     R I T  +   +V  VS G  
Sbjct: 516 VSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNS----RNIPTLVKDISNVGEVSCGSS 571

Query: 334 HVVALDSSGY-VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVD 392
           H +AL   G  V+++G G  G LGHGD      P+ + +L+     +VCA  + +  L  
Sbjct: 572 HTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTS 631

Query: 393 TGSVYGFG---WMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRG 449
           TG VY +G    +G GS            LRP++++ L A  +  +S G  H + ++   
Sbjct: 632 TGQVYAWGCGACLGCGS-------SEATALRPKLIEELAATRIVDVSIGDSHCLALSHDN 684

Query: 450 RLFGFGDNERAQLGH 464
            ++ +G+N   Q G 
Sbjct: 685 EVYAWGNNSMGQCGQ 699



 Score = 98.6 bits (244), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 91/266 (34%), Positives = 128/266 (48%), Gaps = 14/266 (5%)

Query: 122 HTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
           HTL   +   VFS G    G LGHG  +TQ              VV VSA   H+A V +
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528

Query: 181 SGQVFTCGDNSSFCCGHRDTN-RPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH-VH 238
            G+++T G+      GH D+N R I  P LV+ +  V   +V+ G + T  L+  G  V 
Sbjct: 529 DGELYTWGEGDFGRLGHGDSNSRNI--PTLVKDISNV--GEVSCGSSHTIALSKDGRTVW 584

Query: 239 TCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
           + G   +G+LGHGDT     PK I  L+ +  + ++ AG    LA+T  G VY++G G+ 
Sbjct: 585 SFGGGDNGKLGHGDTNRVYKPKVIEALQGM-FIRKVCAGSQSSLALTSTGQVYAWGCGA- 642

Query: 299 FCLGHG-EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 357
            CLG G  +   L+P+ I+        +V VS GD H +AL     VY WG    G  G 
Sbjct: 643 -CLGCGSSEATALRPKLIEEL--AATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQ 699

Query: 358 GDEIDK-TLPEPLSSLKSHLAVQVCA 382
           G+     T P+ +S L      Q+ A
Sbjct: 700 GNSTGPITKPKKVSGLDGIAIQQISA 725



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 87/322 (27%), Positives = 149/322 (46%), Gaps = 13/322 (4%)

Query: 160  PSAAHVVQVSASENHAAFVLQS-GQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPC 218
            PS +   QV   +N   FV+Q+ G V  CG+ S    G  +++  +    ++ AL+G   
Sbjct: 3665 PSFSQAQQVICGQN-CTFVIQANGTVLACGEGSYGRLGQGNSDD-LHVLTVISALQGFVV 3722

Query: 219  KQVTAGLNFTGF---LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA 275
             Q+       G    LT  G V + G   +G+LGHG++  +  P+ I  L+    VVQ++
Sbjct: 3723 TQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQG-EEVVQMS 3781

Query: 276  AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHV 335
             G  +   VT +G +++FG+G    LG G   ++  P  +     +G  + +V+ G  H 
Sbjct: 3782 CGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTAL--EGYQIGQVACGLNHT 3839

Query: 336  VALDSSG-YVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 394
            +A+ + G  V+ +G G  G LG G+   K+ P+ +  L      +V    + +  L   G
Sbjct: 3840 LAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDG 3899

Query: 395  SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 454
             VY FG      +G P+ G +    RP+ +  L    +  ++ G  HT+ +   G ++ +
Sbjct: 3900 HVYTFGQDRL--IGLPE-GRARNHNRPQQIPVLAGVIIEDVAVGAEHTLALASNGDVYAW 3956

Query: 455  GDNERAQLGHDTLRGCLEPTEI 476
            G N   QLG        EPT +
Sbjct: 3957 GSNSEGQLGLGHTNHVREPTVV 3978



 Score = 84.7 bits (208), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 68/230 (29%), Positives = 108/230 (46%), Gaps = 11/230 (4%)

Query: 237  VHTCGSNTHGQLGH-GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 295
            V+  G+  HGQL   G  +  P   + AP        Q+  G +    +  NG V + G 
Sbjct: 3640 VYLWGAGRHGQLAEAGRNVMVP---AAAP--SFSQAQQVICGQNCTFVIQANGTVLACGE 3694

Query: 296  GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG-DEHVVALDSSGYVYTWGKGYCGA 354
            GS   LG G   D      I   +   +  +  S G D H +AL  SG V++WG G  G 
Sbjct: 3695 GSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGK 3754

Query: 355  LGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGV 414
            LGHG+   +  P  + +L+    VQ+    + + V+   G ++ FG   +G LG  +   
Sbjct: 3755 LGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN--T 3812

Query: 415  SDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRL-FGFGDNERAQLG 463
            S+K L P  + +L  + + Q++ GL HT+ V+  G + + FGD +  +LG
Sbjct: 3813 SNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLG 3861



 Score = 59.7 bits (143), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 49/180 (27%), Positives = 82/180 (45%), Gaps = 13/180 (7%)

Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 349
           VY +GS S+  L  G Q   LQP+   +F         + AG      + + G V   GK
Sbjct: 374 VYVWGSNSSHQLVEGTQEKILQPKLAPSFS----DAQTIEAGQYCTFVISTDGSVRACGK 429

Query: 350 GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKR----KTFVLVDTGSVYGFGWMGFG 405
           G  G LG GD  +++  + L + + H +++  +  +     T      G V+ +G   +G
Sbjct: 430 GSYGRLGLGDSNNQSTLKKL-TFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYG 488

Query: 406 SLGFPDRGVSDKVLRPRILD-SLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 464
            LG    G S     P+++   L+   V  +S G  H+  VT+ G L+ +G+ +  +LGH
Sbjct: 489 KLG---HGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGH 545



 Score = 50.1 bits (118), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 33/116 (28%), Positives = 53/116 (45%), Gaps = 6/116 (5%)

Query: 125 LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQV 184
           L S   V++ G   C  LG G      +    I   +A  +V VS  ++H   +    +V
Sbjct: 629 LTSTGQVYAWGCGAC--LGCGSSEATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEV 686

Query: 185 FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG----LNFTGFLTIRGH 236
           +  G+NS   CG  ++  PI +P+ V  L G+  +Q++AG    L +T     R H
Sbjct: 687 YAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLAWTALPRDREH 742



 Score = 48.9 bits (115), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 41/143 (28%), Positives = 67/143 (46%), Gaps = 9/143 (6%)

Query: 344  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 403
            VY WG G  G L    E  + +  P ++     A QV   +  TFV+   G+V   G   
Sbjct: 3640 VYLWGAGRHGQLA---EAGRNVMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGS 3696

Query: 404  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLY---HTVVVTDRGRLFGFGDNERA 460
            +G LG   +G SD +    ++ +L+   V+Q+ T      H++ +T+ G +F +GD +  
Sbjct: 3697 YGRLG---QGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYG 3753

Query: 461  QLGHDTLRGCLEPTEIFIQEMEE 483
            +LGH        P +I   + EE
Sbjct: 3754 KLGHGNSDRQRRPRQIEALQGEE 3776


>gi|427794767|gb|JAA62835.1| Putative hect e3 ubiquitin ligase culex quinquefasciatus hect e3
           ubiquitin ligase, partial [Rhipicephalus pulchellus]
          Length = 1181

 Score =  128 bits (321), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 103/316 (32%), Positives = 147/316 (46%), Gaps = 13/316 (4%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V +V+    H   +L +G V++CG N     G    +R + +   V AL     + V  G
Sbjct: 93  VREVACGHKHTLVLLANGSVYSCGAND---FGQLGQDRSMRKLEQVAALSAHEIRAVACG 149

Query: 225 LNFTGFLTIRGHVHTCGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
              +  L+  G V + G N +GQLG G +   R  PK I  L  +  +VQIA G  + LA
Sbjct: 150 EAHSLALSDAGQVFSWGCNRNGQLGCGTEEESRLRPKVIKKLATL-HIVQIACGAVHCLA 208

Query: 284 VTGNGVVYSFGSGSNFCLGHGEQH--DELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 341
           +  NG ++S+G  ++  LG G     +E  PR +      G+ +  V+ G  H V L  S
Sbjct: 209 LANNGELFSWGGNASGQLGLGRDSTGNERLPRRVSHL--VGVPLALVACGAMHSVGLTPS 266

Query: 342 GYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGW 401
           G V+ WG+  CG LG  D+ D+  P  L  L+S     VC  +  T  L   G V+ FG 
Sbjct: 267 GTVFVWGRNSCGQLGLSDQRDRLHPTVLKPLRSQRIKHVCCGENHTAALTADGGVFTFGA 326

Query: 402 MGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDR-GRLFGFGDNERA 460
             +G LG    GV      PR +  L    +SQ+S G  HTV    + GRL+ FG     
Sbjct: 327 GTYGQLG---HGVKVNEAVPRRVVELMGTAISQLSCGRCHTVAYAPQSGRLYIFGLGMSG 383

Query: 461 QLGHDTLRGCLEPTEI 476
           QLG+ TL     P  +
Sbjct: 384 QLGNGTLESSALPVTV 399



 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 82/274 (29%), Positives = 134/274 (48%), Gaps = 21/274 (7%)

Query: 199 DTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPT 258
           DT  P+ +P  V        ++V  G   T  L   G V++CG+N  GQLG         
Sbjct: 74  DTETPVSQPERVRRFGTRAVREVACGHKHTLVLLANGSVYSCGANDFGQLGQD------- 126

Query: 259 PKSIAPLEEVGS-----VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHG-EQHDELQP 312
            +S+  LE+V +     +  +A G ++ LA++  G V+S+G   N  LG G E+   L+P
Sbjct: 127 -RSMRKLEQVAALSAHEIRAVACGEAHSLALSDAGQVFSWGCNRNGQLGCGTEEESRLRP 185

Query: 313 RAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEI--DKTLPEPLS 370
           + I+  +   +H+V+++ G  H +AL ++G +++WG    G LG G +   ++ LP  +S
Sbjct: 186 KVIK--KLATLHIVQIACGAVHCLALANNGELFSWGGNASGQLGLGRDSTGNERLPRRVS 243

Query: 371 SLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAH 430
            L       V      +  L  +G+V+ +G    G LG  D+   D+ L P +L  LR+ 
Sbjct: 244 HLVGVPLALVACGAMHSVGLTPSGTVFVWGRNSCGQLGLSDQ--RDR-LHPTVLKPLRSQ 300

Query: 431 HVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 464
            +  +  G  HT  +T  G +F FG     QLGH
Sbjct: 301 RIKHVCCGENHTAALTADGGVFTFGAGTYGQLGH 334



 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 88/300 (29%), Positives = 143/300 (47%), Gaps = 14/300 (4%)

Query: 115 QITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
           ++  G  HTL L++N SV+SCG++  G LG      +     ++   SA  +  V+  E 
Sbjct: 95  EVACGHKHTLVLLANGSVYSCGANDFGQLGQDRSMRK---LEQVAALSAHEIRAVACGEA 151

Query: 174 HAAFVLQSGQVFT--CGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
           H+  +  +GQVF+  C  N    CG  + +R   RP++++ L  +   Q+  G      L
Sbjct: 152 HSLALSDAGQVFSWGCNRNGQLGCGTEEESR--LRPKVIKKLATLHIVQIACGAVHCLAL 209

Query: 232 TIRGHVHTCGSNTHGQLGHG--DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 289
              G + + G N  GQLG G   T +   P+ ++ L  V  +  +A G  + + +T +G 
Sbjct: 210 ANNGELFSWGGNASGQLGLGRDSTGNERLPRRVSHLVGV-PLALVACGAMHSVGLTPSGT 268

Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 349
           V+ +G  S   LG  +Q D L P  ++  R + I    V  G+ H  AL + G V+T+G 
Sbjct: 269 VFVWGRNSCGQLGLSDQRDRLHPTVLKPLRSQRIK--HVCCGENHTAALTADGGVFTFGA 326

Query: 350 GYCGALGHGDEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLG 408
           G  G LGHG ++++ +P  +  L      Q+ C R         +G +Y FG    G LG
Sbjct: 327 GTYGQLGHGVKVNEAVPRRVVELMGTAISQLSCGRCHTVAYAPQSGRLYIFGLGMSGQLG 386



 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 83/254 (32%), Positives = 123/254 (48%), Gaps = 6/254 (2%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           +  G  H+L +S++  VFS G +  G LG G E    +    I   +  H+VQ++    H
Sbjct: 146 VACGEAHSLALSDAGQVFSWGCNRNGQLGCGTEEESRLRPKVIKKLATLHIVQIACGAVH 205

Query: 175 AAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
              +  +G++F+ G N+S   G  RD+      PR V  L GVP   V  G   +  LT 
Sbjct: 206 CLALANNGELFSWGGNASGQLGLGRDSTGNERLPRRVSHLVGVPLALVACGAMHSVGLTP 265

Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
            G V   G N+ GQLG  D  DR  P  + PL     +  +  G ++  A+T +G V++F
Sbjct: 266 SGTVFVWGRNSCGQLGLSDQRDRLHPTVLKPLRS-QRIKHVCCGENHTAALTADGGVFTF 324

Query: 294 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL-DSSGYVYTWGKGYC 352
           G+G+   LGHG + +E  PR +      G  + ++S G  H VA    SG +Y +G G  
Sbjct: 325 GAGTYGQLGHGVKVNEAVPRRVVELM--GTAISQLSCGRCHTVAYAPQSGRLYIFGLGMS 382

Query: 353 GALGHGDEIDKTLP 366
           G LG+G      LP
Sbjct: 383 GQLGNGTLESSALP 396



 Score = 55.1 bits (131), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 39/128 (30%), Positives = 62/128 (48%), Gaps = 14/128 (10%)

Query: 344 VYTWGKGYCGALGH---GDEIDK----TLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSV 396
           +Y+WG G  G LG     D +D     + PE +    +    +V    + T VL+  GSV
Sbjct: 53  LYSWGLGPNGELGLTQGKDGVDTETPVSQPERVRRFGTRAVREVACGHKHTLVLLANGSV 112

Query: 397 YGFGWMGFGSLGFPDRGVSDKVLRP-RILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFG 455
           Y  G   FG LG       D+ +R    + +L AH +  ++ G  H++ ++D G++F +G
Sbjct: 113 YSCGANDFGQLG------QDRSMRKLEQVAALSAHEIRAVACGEAHSLALSDAGQVFSWG 166

Query: 456 DNERAQLG 463
            N   QLG
Sbjct: 167 CNRNGQLG 174


>gi|67623229|ref|XP_667897.1| uvb-resistance protein uvr8 [Cryptosporidium hominis TU502]
 gi|54659070|gb|EAL37667.1| uvb-resistance protein uvr8 [Cryptosporidium hominis]
          Length = 487

 Score =  128 bits (321), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 108/346 (31%), Positives = 170/346 (49%), Gaps = 20/346 (5%)

Query: 115 QITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
           +++ G  ++  I+NS  +   G   CG LG G     C+   R+N  S  +VVQV+ S+ 
Sbjct: 46  KVSCGSNYSAAITNSGDLILWGYGGCGQLGFG-NLEDCL-VPRVNL-SLKNVVQVACSDR 102

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRD-----TNRPIFRPRLVEALKGVPCKQVTAGLNFT 228
           H A +L +G+++T G + +   GH       +N  + +P  V+AL+G    QV+ G   T
Sbjct: 103 HTAAILSNGELYTWGCSKNGKLGHGQFELSISNNVVSQPMKVKALEGEKVIQVSCGSYHT 162

Query: 229 GFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG 288
           G LT      T G    G+LGHGDT D  TPK I  L  +  + +I+ G  +   +   G
Sbjct: 163 GCLTDDKKALTWGLGLQGRLGHGDTQDIFTPKLIESLAGL-PIKEISCGGHHTAILLVTG 221

Query: 289 VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 348
            +Y FG G+   LG G   D L PR ++    + I + +VS G +H  A+   G VYTWG
Sbjct: 222 KLYMFGGGAFGKLGFGSTDDVLIPRLLEG-PLEDIQITKVSLGSQHSAAVTKCGKVYTWG 280

Query: 349 KGYCGALGH---GDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFG 405
           +G  G LGH   G E D   P+ LS+L+    V +      +  L D G +Y +G     
Sbjct: 281 QG--GRLGHIFNGPEHDFLSPKRLSNLEKAFIVDISCGNSHSVALSDVGDIYTWGMT--K 336

Query: 406 SLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRL 451
           ++G   +G+   +  P     L+  ++ Q+     H++ ++D G L
Sbjct: 337 NIGHGIQGIHPNM--PSKHPILQNKNIVQVVCSSSHSIALSDIGAL 380



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 86/266 (32%), Positives = 131/266 (49%), Gaps = 18/266 (6%)

Query: 207 PRLVEALKGVP-CKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL 265
           P LV+ L+ +    +V+ G N++  +T  G +   G    GQLG G+  D   P+    L
Sbjct: 32  PHLVDGLRHLSSISKVSCGSNYSAAITNSGDLILWGYGGCGQLGFGNLEDCLVPRVNLSL 91

Query: 266 EEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDEL------QPRAIQTFR 319
           +   +VVQ+A    +  A+  NG +Y++G   N  LGHG+    +      QP  ++   
Sbjct: 92  K---NVVQVACSDRHTAAILSNGELYTWGCSKNGKLGHGQFELSISNNVVSQPMKVKAL- 147

Query: 320 RKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQ 379
            +G  V++VS G  H   L       TWG G  G LGHGD  D   P+ + SL      +
Sbjct: 148 -EGEKVIQVSCGSYHTGCLTDDKKALTWGLGLQGRLGHGDTQDIFTPKLIESLAGLPIKE 206

Query: 380 VCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDS-LRAHHVSQISTG 438
           +      T +L+ TG +Y FG   FG LGF   G +D VL PR+L+  L    ++++S G
Sbjct: 207 ISCGGHHTAILLVTGKLYMFGGGAFGKLGF---GSTDDVLIPRLLEGPLEDIQITKVSLG 263

Query: 439 LYHTVVVTDRGRLFGFGDNERAQLGH 464
             H+  VT  G+++ +G   R  LGH
Sbjct: 264 SQHSAAVTKCGKVYTWGQGGR--LGH 287



 Score = 91.3 bits (225), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 69/239 (28%), Positives = 111/239 (46%), Gaps = 13/239 (5%)

Query: 241 GSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 300
           GS+ +GQ G       P P  +  L  + S+ +++ G +Y  A+T +G +  +G G    
Sbjct: 14  GSSEYGQHGSKGEEVSPGPHLVDGLRHLSSISKVSCGSNYSAAITNSGDLILWGYGGCGQ 73

Query: 301 LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGD- 359
           LG G   D L PR   + +    +VV+V+  D H  A+ S+G +YTWG    G LGHG  
Sbjct: 74  LGFGNLEDCLVPRVNLSLK----NVVQVACSDRHTAAILSNGELYTWGCSKNGKLGHGQF 129

Query: 360 --EIDKTL---PEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGV 414
              I   +   P  + +L+    +QV      T  L D      +G    G LG  D   
Sbjct: 130 ELSISNNVVSQPMKVKALEGEKVIQVSCGSYHTGCLTDDKKALTWGLGLQGRLGHGD--- 186

Query: 415 SDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEP 473
           +  +  P++++SL    + +IS G +HT ++   G+L+ FG     +LG  +    L P
Sbjct: 187 TQDIFTPKLIESLAGLPIKEISCGGHHTAILLVTGKLYMFGGGAFGKLGFGSTDDVLIP 245


>gi|291404281|ref|XP_002718504.1| PREDICTED: hect domain and RLD 4 isoform 1 [Oryctolagus cuniculus]
          Length = 1057

 Score =  127 bits (320), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 90/276 (32%), Positives = 142/276 (51%), Gaps = 10/276 (3%)

Query: 204 IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 263
           +  PR  +       + V  GL  T F+   G V+TCG N  GQLGH  +  R  P+ + 
Sbjct: 22  VLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKS--RKKPEQVV 79

Query: 264 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH-GEQHDELQPRAIQTFRRKG 322
            L+   ++V ++ G ++ LA+   G VY++G  S+  LG  G +     PR I++     
Sbjct: 80  ALD-AQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSL--SD 136

Query: 323 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK-TLPEPLSSLKSHLAVQVC 381
           I +V+V+ G  H +AL  +  V+ WG+   G LG G +  K T P+ + SL     +QV 
Sbjct: 137 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQTSPQLIKSLLGIPFMQVA 196

Query: 382 ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYH 441
           A    +FVL  +G+++G+G   FG LG  D   +D+ + P +L SLR+  +  I  G  H
Sbjct: 197 AGGAHSFVLTLSGAIFGWGRNKFGQLGLNDE--NDRYV-PNLLKSLRSQKIVYICCGEDH 253

Query: 442 TVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF 477
           T  +T  G +F FG     QLGH++    + P ++F
Sbjct: 254 TAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVF 289



 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 105/333 (31%), Positives = 154/333 (46%), Gaps = 13/333 (3%)

Query: 135 GSSLCGVLGHGPETTQCVSFTRI-NFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSF 193
           G++  G LG G    + V   R  +F     V  V     H  FVL  G V+TCG N   
Sbjct: 5   GNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLG 64

Query: 194 CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGH-GD 252
             GH  + +   +P  V AL       V+ G   T  L  +G V+  G ++ GQLG  G 
Sbjct: 65  QLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGS 121

Query: 253 TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHG-EQHDELQ 311
                 P++I  L ++  +VQ+A G  + LA++    V+ +G      LG G +   +  
Sbjct: 122 EECIRVPRNIKSLSDI-QIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQTS 180

Query: 312 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSS 371
           P+ I++    GI  ++V+AG  H   L  SG ++ WG+   G LG  DE D+ +P  L S
Sbjct: 181 PQLIKSLL--GIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKS 238

Query: 372 LKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHH 431
           L+S   V +C  +  T  L   G V+ FG  G+G LG      +   + PR +  L    
Sbjct: 239 LRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG---HNSTSHEINPRKVFELMGSI 295

Query: 432 VSQISTGLYHT-VVVTDRGRLFGFGDNERAQLG 463
           V+QI+ G  HT   V   GR++ FG     QLG
Sbjct: 296 VTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 80/291 (27%), Positives = 138/291 (47%), Gaps = 8/291 (2%)

Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 179
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V VS  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVSCGEAHTLALN 100

Query: 180 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 239
             GQV+  G +S    G   +   I  PR +++L  +   QV  G   +  L+    V  
Sbjct: 101 DKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFC 160

Query: 240 CGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
            G N +GQLG G D   + +P+ I  L  +   +Q+AAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKYGQLGLGIDCKKQTSPQLIKSLLGI-PFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 299 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 358
             LG  +++D   P  +++ R + I  V +  G++H  AL   G V+T+G G  G LGH 
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRSQKI--VYICCGEDHTAALTKEGGVFTFGAGGYGQLGHN 277

Query: 359 DEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLG 408
               +  P  +  L   +  Q+ C R+  +  +  +G +Y FG  G G LG
Sbjct: 278 STSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 84/274 (30%), Positives = 132/274 (48%), Gaps = 10/274 (3%)

Query: 98  QSVEHSSDIVETSAGNM-QITTGRYHTLLISNS-SVFSCGSSLCGVLGH-GPETTQCVSF 154
           +S +    +V   A N+  ++ G  HTL +++   V++ G    G LG  G E  +C+  
Sbjct: 70  KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSE--ECIRV 127

Query: 155 TR-INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEAL 213
            R I   S   +VQV+    H+  + ++ +VF  G N     G     +    P+L+++L
Sbjct: 128 PRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQTSPQLIKSL 187

Query: 214 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
            G+P  QV AG   +  LT+ G +   G N  GQLG  D  DR  P  +  L     +V 
Sbjct: 188 LGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRS-QKIVY 246

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           I  G  +  A+T  G V++FG+G    LGH     E+ PR +  F   G  V +++ G +
Sbjct: 247 ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQ 304

Query: 334 HVVA-LDSSGYVYTWGKGYCGALGHGDEIDKTLP 366
           H  A + SSG +Y++G G  G LG G   ++  P
Sbjct: 305 HTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338



 Score = 80.9 bits (198), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 77/251 (30%), Positives = 119/251 (47%), Gaps = 17/251 (6%)

Query: 70  IYA-GMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLISN 128
           +YA G+  + Q+ LL       +  +R  ++++  SDI       +Q+  G YH+L +S 
Sbjct: 105 VYAWGLDSDGQLGLLGS-----EECIRVPRNIKSLSDI-----QIVQVACGYYHSLALSK 154

Query: 129 SS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTC 187
           +S VF  G +  G LG G +  +  S   I        +QV+A   H+  +  SG +F  
Sbjct: 155 ASEVFCWGQNKYGQLGLGIDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGW 214

Query: 188 GDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQ 247
           G N     G  D N   + P L+++L+      +  G + T  LT  G V T G+  +GQ
Sbjct: 215 GRNKFGQLGLNDENDR-YVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQ 273

Query: 248 LGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVVYSFGSGSNFCLGHGE 305
           LGH  T     P+ +   E +GS+V QIA G  +  A V  +G +YSFG G N  LG G 
Sbjct: 274 LGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGS 331

Query: 306 QHDELQPRAIQ 316
             +   P  ++
Sbjct: 332 TSNRKSPFTVK 342


>gi|291404283|ref|XP_002718505.1| PREDICTED: hect domain and RLD 4 isoform 2 [Oryctolagus cuniculus]
          Length = 1049

 Score =  127 bits (320), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 90/276 (32%), Positives = 142/276 (51%), Gaps = 10/276 (3%)

Query: 204 IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 263
           +  PR  +       + V  GL  T F+   G V+TCG N  GQLGH  +  R  P+ + 
Sbjct: 22  VLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKS--RKKPEQVV 79

Query: 264 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH-GEQHDELQPRAIQTFRRKG 322
            L+   ++V ++ G ++ LA+   G VY++G  S+  LG  G +     PR I++     
Sbjct: 80  ALD-AQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSL--SD 136

Query: 323 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK-TLPEPLSSLKSHLAVQVC 381
           I +V+V+ G  H +AL  +  V+ WG+   G LG G +  K T P+ + SL     +QV 
Sbjct: 137 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQTSPQLIKSLLGIPFMQVA 196

Query: 382 ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYH 441
           A    +FVL  +G+++G+G   FG LG  D   +D+ + P +L SLR+  +  I  G  H
Sbjct: 197 AGGAHSFVLTLSGAIFGWGRNKFGQLGLNDE--NDRYV-PNLLKSLRSQKIVYICCGEDH 253

Query: 442 TVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF 477
           T  +T  G +F FG     QLGH++    + P ++F
Sbjct: 254 TAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVF 289



 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 105/333 (31%), Positives = 154/333 (46%), Gaps = 13/333 (3%)

Query: 135 GSSLCGVLGHGPETTQCVSFTRI-NFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSF 193
           G++  G LG G    + V   R  +F     V  V     H  FVL  G V+TCG N   
Sbjct: 5   GNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLG 64

Query: 194 CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGH-GD 252
             GH  + +   +P  V AL       V+ G   T  L  +G V+  G ++ GQLG  G 
Sbjct: 65  QLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGS 121

Query: 253 TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHG-EQHDELQ 311
                 P++I  L ++  +VQ+A G  + LA++    V+ +G      LG G +   +  
Sbjct: 122 EECIRVPRNIKSLSDI-QIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQTS 180

Query: 312 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSS 371
           P+ I++    GI  ++V+AG  H   L  SG ++ WG+   G LG  DE D+ +P  L S
Sbjct: 181 PQLIKSLL--GIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKS 238

Query: 372 LKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHH 431
           L+S   V +C  +  T  L   G V+ FG  G+G LG      +   + PR +  L    
Sbjct: 239 LRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG---HNSTSHEINPRKVFELMGSI 295

Query: 432 VSQISTGLYHT-VVVTDRGRLFGFGDNERAQLG 463
           V+QI+ G  HT   V   GR++ FG     QLG
Sbjct: 296 VTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 80/291 (27%), Positives = 138/291 (47%), Gaps = 8/291 (2%)

Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 179
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V VS  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVSCGEAHTLALN 100

Query: 180 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 239
             GQV+  G +S    G   +   I  PR +++L  +   QV  G   +  L+    V  
Sbjct: 101 DKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFC 160

Query: 240 CGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
            G N +GQLG G D   + +P+ I  L  +   +Q+AAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKYGQLGLGIDCKKQTSPQLIKSLLGI-PFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 299 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 358
             LG  +++D   P  +++ R + I  V +  G++H  AL   G V+T+G G  G LGH 
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRSQKI--VYICCGEDHTAALTKEGGVFTFGAGGYGQLGHN 277

Query: 359 DEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLG 408
               +  P  +  L   +  Q+ C R+  +  +  +G +Y FG  G G LG
Sbjct: 278 STSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 84/274 (30%), Positives = 132/274 (48%), Gaps = 10/274 (3%)

Query: 98  QSVEHSSDIVETSAGNM-QITTGRYHTLLISNS-SVFSCGSSLCGVLGH-GPETTQCVSF 154
           +S +    +V   A N+  ++ G  HTL +++   V++ G    G LG  G E  +C+  
Sbjct: 70  KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSE--ECIRV 127

Query: 155 TR-INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEAL 213
            R I   S   +VQV+    H+  + ++ +VF  G N     G     +    P+L+++L
Sbjct: 128 PRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQTSPQLIKSL 187

Query: 214 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
            G+P  QV AG   +  LT+ G +   G N  GQLG  D  DR  P  +  L     +V 
Sbjct: 188 LGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRS-QKIVY 246

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           I  G  +  A+T  G V++FG+G    LGH     E+ PR +  F   G  V +++ G +
Sbjct: 247 ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQ 304

Query: 334 HVVA-LDSSGYVYTWGKGYCGALGHGDEIDKTLP 366
           H  A + SSG +Y++G G  G LG G   ++  P
Sbjct: 305 HTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338



 Score = 80.9 bits (198), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 77/251 (30%), Positives = 119/251 (47%), Gaps = 17/251 (6%)

Query: 70  IYA-GMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLISN 128
           +YA G+  + Q+ LL       +  +R  ++++  SDI       +Q+  G YH+L +S 
Sbjct: 105 VYAWGLDSDGQLGLLGS-----EECIRVPRNIKSLSDI-----QIVQVACGYYHSLALSK 154

Query: 129 SS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTC 187
           +S VF  G +  G LG G +  +  S   I        +QV+A   H+  +  SG +F  
Sbjct: 155 ASEVFCWGQNKYGQLGLGIDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGW 214

Query: 188 GDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQ 247
           G N     G  D N   + P L+++L+      +  G + T  LT  G V T G+  +GQ
Sbjct: 215 GRNKFGQLGLNDENDR-YVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQ 273

Query: 248 LGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVVYSFGSGSNFCLGHGE 305
           LGH  T     P+ +   E +GS+V QIA G  +  A V  +G +YSFG G N  LG G 
Sbjct: 274 LGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGS 331

Query: 306 QHDELQPRAIQ 316
             +   P  ++
Sbjct: 332 TSNRKSPFTVK 342


>gi|257196144|ref|NP_663592.3| hect domain and RCC1-like domain 1 [Mus musculus]
          Length = 4859

 Score =  127 bits (320), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 102/339 (30%), Positives = 167/339 (49%), Gaps = 17/339 (5%)

Query: 115  QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQV---SA 170
            Q+  G+  T +I +N +V +CG    G LG G      V  T I+      V Q+     
Sbjct: 4029 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHV-LTVISALQGFVVTQLVTSCG 4087

Query: 171  SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
            S+ H+  + +SG+VF+ GD      GH +++R   RPR +EAL+G    Q++ G   +  
Sbjct: 4088 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQMSCGFKHSAV 4146

Query: 231  LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSVVQIAAGPSYMLAVTGNG 288
            +T  G + T G+  +G+LG G+T ++  P+ +  LE  ++G   Q+A G ++ LAV+ +G
Sbjct: 4147 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIG---QVACGLNHTLAVSADG 4203

Query: 289  -VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 347
             +V++FG G    LG G    +  P+ +      GI + +V+ G +  VAL   G+VYT+
Sbjct: 4204 SMVWAFGDGDYGKLGLGNSTAKSSPQKVDVL--CGIGIKKVACGTQFSVALTKDGHVYTF 4261

Query: 348  GKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSL 407
            G+     L  G   +   P+ +  L   +   V      T  L  TG VY +G    G L
Sbjct: 4262 GQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQL 4321

Query: 408  GFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT 446
            G    G ++ V  P ++  L+  ++ QIS G  H+   T
Sbjct: 4322 GL---GHTNHVREPTLVTVLQGKNIRQISAGRCHSAAWT 4357



 Score =  109 bits (273), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 91/315 (28%), Positives = 144/315 (45%), Gaps = 25/315 (7%)

Query: 160 PSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTN------RPIFRPRLVEAL 213
           PS +    + A +     +   G V  CG  S    G  D+N      +  F P    ++
Sbjct: 400 PSFSDAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPH--RSI 457

Query: 214 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
           K V   + + G   T   T  G V + G   +G+LGHG++  +  PK I    +   VV 
Sbjct: 458 KKVSSSKGSDG--HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVC 515

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           ++AG  +  AVT +G +Y++G G    LGHG+ +     R I T  +   +V  VS G  
Sbjct: 516 VSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNS----RNIPTLVKDISNVGEVSCGSS 571

Query: 334 HVVALDSSGY-VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVD 392
           H +AL   G  V+++G G  G LGHGD      P+ + +L+     +VCA  + +  L  
Sbjct: 572 HTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTS 631

Query: 393 TGSVYGFG---WMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRG 449
           TG VY +G    +G GS            LRP++++ L A  +  IS G  H + ++   
Sbjct: 632 TGQVYAWGCGACLGCGS-------SEATALRPKLIEELAATRIVDISIGDSHCLSLSHDN 684

Query: 450 RLFGFGDNERAQLGH 464
            ++ +G+N   Q G 
Sbjct: 685 EVYAWGNNSMGQCGQ 699



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 87/324 (26%), Positives = 150/324 (46%), Gaps = 13/324 (4%)

Query: 160  PSAAHVVQVSASENHAAFVLQS-GQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPC 218
            PS +   QV   +N   FV+Q+ G V  CG+ S    G  +++  +    ++ AL+G   
Sbjct: 4022 PSFSQAQQVICGQN-CTFVIQANGTVLACGEGSYGRLGQGNSDD-LHVLTVISALQGFVV 4079

Query: 219  KQVTAGLNFTGF---LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA 275
             Q+       G    LT  G V + G   +G+LGHG++  +  P+ I  L+    VVQ++
Sbjct: 4080 TQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQG-EEVVQMS 4138

Query: 276  AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHV 335
             G  +   VT +G +++FG+G    LG G   ++  P  +     +G  + +V+ G  H 
Sbjct: 4139 CGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTAL--EGYQIGQVACGLNHT 4196

Query: 336  VALDSSG-YVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 394
            +A+ + G  V+ +G G  G LG G+   K+ P+ +  L      +V    + +  L   G
Sbjct: 4197 LAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDG 4256

Query: 395  SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 454
             VY FG      +G P+ G +    RP+ +  L    +  ++ G  HT+ +   G ++ +
Sbjct: 4257 HVYTFGQDRL--IGLPE-GRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAW 4313

Query: 455  GDNERAQLGHDTLRGCLEPTEIFI 478
            G N   QLG        EPT + +
Sbjct: 4314 GSNSEGQLGLGHTNHVREPTLVTV 4337



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 89/266 (33%), Positives = 128/266 (48%), Gaps = 14/266 (5%)

Query: 122 HTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
           HTL   +   VFS G    G LGHG  +TQ              VV VSA   H+A V +
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528

Query: 181 SGQVFTCGDNSSFCCGHRDTN-RPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH-VH 238
            G+++T G+      GH D+N R I  P LV+ +  V   +V+ G + T  L+  G  V 
Sbjct: 529 DGELYTWGEGDFGRLGHGDSNSRNI--PTLVKDISNV--GEVSCGSSHTIALSKDGRTVW 584

Query: 239 TCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
           + G   +G+LGHGDT     PK I  L+ +  + ++ AG    LA+T  G VY++G G+ 
Sbjct: 585 SFGGGDNGKLGHGDTNRVYKPKVIEALQGM-FIRKVCAGSQSSLALTSTGQVYAWGCGA- 642

Query: 299 FCLGHG-EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 357
            CLG G  +   L+P+ I+        +V +S GD H ++L     VY WG    G  G 
Sbjct: 643 -CLGCGSSEATALRPKLIEEL--AATRIVDISIGDSHCLSLSHDNEVYAWGNNSMGQCGQ 699

Query: 358 GDEIDK-TLPEPLSSLKSHLAVQVCA 382
           G+     T P+ +S L      Q+ A
Sbjct: 700 GNSTGPITKPKKVSGLDGIAIQQISA 725



 Score = 84.7 bits (208), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 68/230 (29%), Positives = 108/230 (46%), Gaps = 11/230 (4%)

Query: 237  VHTCGSNTHGQLGH-GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 295
            V+  G+  HGQL   G  +  P   + AP        Q+  G +    +  NG V + G 
Sbjct: 3997 VYLWGAGRHGQLAEAGRNVMVP---ATAP--SFSQAQQVICGQNCTFVIQANGTVLACGE 4051

Query: 296  GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG-DEHVVALDSSGYVYTWGKGYCGA 354
            GS   LG G   D      I   +   +  +  S G D H +AL  SG V++WG G  G 
Sbjct: 4052 GSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGK 4111

Query: 355  LGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGV 414
            LGHG+   +  P  + +L+    VQ+    + + V+   G ++ FG   +G LG  +   
Sbjct: 4112 LGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN--T 4169

Query: 415  SDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRL-FGFGDNERAQLG 463
            S+K L P  + +L  + + Q++ GL HT+ V+  G + + FGD +  +LG
Sbjct: 4170 SNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLG 4218



 Score = 59.7 bits (143), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 49/180 (27%), Positives = 82/180 (45%), Gaps = 13/180 (7%)

Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 349
           VY +GS S+  L  G Q   LQP+   +F         + AG      + + G V   GK
Sbjct: 374 VYVWGSNSSHQLVEGTQEKILQPKLAPSFS----DAQTIEAGQYCTFVISTDGSVRACGK 429

Query: 350 GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKR----KTFVLVDTGSVYGFGWMGFG 405
           G  G LG GD  +++  + L + + H +++  +  +     T      G V+ +G   +G
Sbjct: 430 GSYGRLGLGDSNNQSTLKKL-TFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYG 488

Query: 406 SLGFPDRGVSDKVLRPRILD-SLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 464
            LG    G S     P+++   L+   V  +S G  H+  VT+ G L+ +G+ +  +LGH
Sbjct: 489 KLG---HGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGH 545



 Score = 49.3 bits (116), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 41/143 (28%), Positives = 67/143 (46%), Gaps = 9/143 (6%)

Query: 344  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 403
            VY WG G  G L    E  + +  P ++     A QV   +  TFV+   G+V   G   
Sbjct: 3997 VYLWGAGRHGQLA---EAGRNVMVPATAPSFSQAQQVICGQNCTFVIQANGTVLACGEGS 4053

Query: 404  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLY---HTVVVTDRGRLFGFGDNERA 460
            +G LG   +G SD +    ++ +L+   V+Q+ T      H++ +T+ G +F +GD +  
Sbjct: 4054 YGRLG---QGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYG 4110

Query: 461  QLGHDTLRGCLEPTEIFIQEMEE 483
            +LGH        P +I   + EE
Sbjct: 4111 KLGHGNSDRQRRPRQIEALQGEE 4133



 Score = 48.5 bits (114), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 28/100 (28%), Positives = 48/100 (48%), Gaps = 2/100 (2%)

Query: 125 LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQV 184
           L S   V++ G   C  LG G      +    I   +A  +V +S  ++H   +    +V
Sbjct: 629 LTSTGQVYAWGCGAC--LGCGSSEATALRPKLIEELAATRIVDISIGDSHCLSLSHDNEV 686

Query: 185 FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           +  G+NS   CG  ++  PI +P+ V  L G+  +Q++AG
Sbjct: 687 YAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAG 726


>gi|126131099|ref|NP_003913.3| probable E3 ubiquitin-protein ligase HERC1 [Homo sapiens]
 gi|296434522|sp|Q15751.2|HERC1_HUMAN RecName: Full=Probable E3 ubiquitin-protein ligase HERC1; AltName:
            Full=HECT domain and RCC1-like domain-containing protein
            1; AltName: Full=p532; AltName: Full=p619
 gi|119598061|gb|EAW77655.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
            RCC1 (CHC1)-like domain (RLD) 1, isoform CRA_b [Homo
            sapiens]
 gi|119598062|gb|EAW77656.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
            RCC1 (CHC1)-like domain (RLD) 1, isoform CRA_b [Homo
            sapiens]
          Length = 4861

 Score =  127 bits (320), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 103/339 (30%), Positives = 166/339 (48%), Gaps = 17/339 (5%)

Query: 115  QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQV---SA 170
            Q+  G+  T +I +N +V +CG    G LG G      V  T I+      V Q+     
Sbjct: 4031 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHV-LTVISALQGFVVTQLVTSCG 4089

Query: 171  SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
            S+ H+  + +SG+VF+ GD      GH +++R   RPR +EAL+G    Q++ G   +  
Sbjct: 4090 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQMSCGFKHSAV 4148

Query: 231  LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSVVQIAAGPSYMLAVTGNG 288
            +T  G + T G+  +G+LG G+T ++  P+ +  LE  ++G   Q+A G ++ LAV+ +G
Sbjct: 4149 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIG---QVACGLNHTLAVSADG 4205

Query: 289  -VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 347
             +V++FG G    LG G    +  P+ I      GI + +V+ G +  VAL   G+VYT+
Sbjct: 4206 SMVWAFGDGDYGKLGLGNSTAKSSPQKIDVL--CGIGIKKVACGTQFSVALTKDGHVYTF 4263

Query: 348  GKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSL 407
            G+     L  G   +   P+ +  L   +   V      T  L   G VY +G    G L
Sbjct: 4264 GQDRLIGLPEGRARNHNRPQQIPVLAGVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQL 4323

Query: 408  GFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT 446
            G    G ++ V  P ++  L+  +V QIS G  H+   T
Sbjct: 4324 GL---GHTNHVREPTLVTGLQGKNVRQISAGRCHSAAWT 4359



 Score =  109 bits (273), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 105/379 (27%), Positives = 165/379 (43%), Gaps = 29/379 (7%)

Query: 96  FLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFT 155
           F +    +SD   T A    I TG    ++     V+  GS+    L  G   TQ     
Sbjct: 340 FEEVCRMASDYSRTCASPDSIQTGDA-PIVSETCEVYVWGSNSSHQLVEG---TQEKILQ 395

Query: 156 RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTN------RPIFRPRL 209
               PS +    + A +     +   G V  CG  S    G  D+N      +  F P  
Sbjct: 396 PKLAPSFSDAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPH- 454

Query: 210 VEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG 269
             ++K V   + + G   T   T  G V + G   +G+LGHG++  +  PK I    +  
Sbjct: 455 -RSIKKVSSSKGSDG--HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGK 511

Query: 270 SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS 329
            VV ++AG  +  AVT +G +Y++G G    LGHG+ +     R I T  +   +V  VS
Sbjct: 512 VVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNS----RNIPTLVKDISNVGEVS 567

Query: 330 AGDEHVVALDSSGY-VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTF 388
            G  H +AL   G  V+++G G  G LGHGD      P+ + +L+     +VCA  + + 
Sbjct: 568 CGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSL 627

Query: 389 VLVDTGSVYGFG---WMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVV 445
            L  TG VY +G    +G GS            LRP++++ L A  +  +S G  H + +
Sbjct: 628 ALTSTGQVYAWGCGACLGCGS-------SEATALRPKLIEELAATRIVDVSIGDSHCLAL 680

Query: 446 TDRGRLFGFGDNERAQLGH 464
           +    ++ +G+N   Q G 
Sbjct: 681 SHDNEVYAWGNNSMGQCGQ 699



 Score = 98.6 bits (244), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 91/266 (34%), Positives = 128/266 (48%), Gaps = 14/266 (5%)

Query: 122 HTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
           HTL   +   VFS G    G LGHG  +TQ              VV VSA   H+A V +
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528

Query: 181 SGQVFTCGDNSSFCCGHRDTN-RPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH-VH 238
            G+++T G+      GH D+N R I  P LV+ +  V   +V+ G + T  L+  G  V 
Sbjct: 529 DGELYTWGEGDFGRLGHGDSNSRNI--PTLVKDISNV--GEVSCGSSHTIALSKDGRTVW 584

Query: 239 TCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
           + G   +G+LGHGDT     PK I  L+ +  + ++ AG    LA+T  G VY++G G+ 
Sbjct: 585 SFGGGDNGKLGHGDTNRVYKPKVIEALQGM-FIRKVCAGSQSSLALTSTGQVYAWGCGA- 642

Query: 299 FCLGHG-EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 357
            CLG G  +   L+P+ I+        +V VS GD H +AL     VY WG    G  G 
Sbjct: 643 -CLGCGSSEATALRPKLIEEL--AATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQ 699

Query: 358 GDEIDK-TLPEPLSSLKSHLAVQVCA 382
           G+     T P+ +S L      Q+ A
Sbjct: 700 GNSTGPITKPKKVSGLDGIAIQQISA 725



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 87/320 (27%), Positives = 148/320 (46%), Gaps = 13/320 (4%)

Query: 160  PSAAHVVQVSASENHAAFVLQS-GQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPC 218
            PS +   QV   +N   FV+Q+ G V  CG+ S    G  +++  +    ++ AL+G   
Sbjct: 4024 PSFSQAQQVICGQN-CTFVIQANGTVLACGEGSYGRLGQGNSDD-LHVLTVISALQGFVV 4081

Query: 219  KQVTAGLNFTGF---LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA 275
             Q+       G    LT  G V + G   +G+LGHG++  +  P+ I  L+    VVQ++
Sbjct: 4082 TQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQG-EEVVQMS 4140

Query: 276  AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHV 335
             G  +   VT +G +++FG+G    LG G   ++  P  +     +G  + +V+ G  H 
Sbjct: 4141 CGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTAL--EGYQIGQVACGLNHT 4198

Query: 336  VALDSSG-YVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 394
            +A+ + G  V+ +G G  G LG G+   K+ P+ +  L      +V    + +  L   G
Sbjct: 4199 LAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDG 4258

Query: 395  SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 454
             VY FG      +G P+ G +    RP+ +  L    +  ++ G  HT+ +   G ++ +
Sbjct: 4259 HVYTFGQDRL--IGLPE-GRARNHNRPQQIPVLAGVIIEDVAVGAEHTLALASNGDVYAW 4315

Query: 455  GDNERAQLGHDTLRGCLEPT 474
            G N   QLG        EPT
Sbjct: 4316 GSNSEGQLGLGHTNHVREPT 4335



 Score = 84.7 bits (208), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 68/230 (29%), Positives = 108/230 (46%), Gaps = 11/230 (4%)

Query: 237  VHTCGSNTHGQLGH-GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 295
            V+  G+  HGQL   G  +  P   + AP        Q+  G +    +  NG V + G 
Sbjct: 3999 VYLWGAGRHGQLAEAGRNVMVP---AAAP--SFSQAQQVICGQNCTFVIQANGTVLACGE 4053

Query: 296  GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG-DEHVVALDSSGYVYTWGKGYCGA 354
            GS   LG G   D      I   +   +  +  S G D H +AL  SG V++WG G  G 
Sbjct: 4054 GSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGK 4113

Query: 355  LGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGV 414
            LGHG+   +  P  + +L+    VQ+    + + V+   G ++ FG   +G LG  +   
Sbjct: 4114 LGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN--T 4171

Query: 415  SDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRL-FGFGDNERAQLG 463
            S+K L P  + +L  + + Q++ GL HT+ V+  G + + FGD +  +LG
Sbjct: 4172 SNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLG 4220



 Score = 49.3 bits (116), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 29/100 (29%), Positives = 48/100 (48%), Gaps = 2/100 (2%)

Query: 125 LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQV 184
           L S   V++ G   C  LG G      +    I   +A  +V VS  ++H   +    +V
Sbjct: 629 LTSTGQVYAWGCGAC--LGCGSSEATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEV 686

Query: 185 FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           +  G+NS   CG  ++  PI +P+ V  L G+  +Q++AG
Sbjct: 687 YAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAG 726



 Score = 48.9 bits (115), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 41/143 (28%), Positives = 67/143 (46%), Gaps = 9/143 (6%)

Query: 344  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 403
            VY WG G  G L    E  + +  P ++     A QV   +  TFV+   G+V   G   
Sbjct: 3999 VYLWGAGRHGQLA---EAGRNVMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGS 4055

Query: 404  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLY---HTVVVTDRGRLFGFGDNERA 460
            +G LG   +G SD +    ++ +L+   V+Q+ T      H++ +T+ G +F +GD +  
Sbjct: 4056 YGRLG---QGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYG 4112

Query: 461  QLGHDTLRGCLEPTEIFIQEMEE 483
            +LGH        P +I   + EE
Sbjct: 4113 KLGHGNSDRQRRPRQIEALQGEE 4135


>gi|296220557|ref|XP_002756356.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
           [Callithrix jacchus]
          Length = 1057

 Score =  127 bits (320), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 90/276 (32%), Positives = 142/276 (51%), Gaps = 10/276 (3%)

Query: 204 IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 263
           +  PR  +       + V  GL  T F+   G V+TCG N  GQLGH  +  R  P+ + 
Sbjct: 22  VLEPRKSDFFINKKVQDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKS--RKKPEQVV 79

Query: 264 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH-GEQHDELQPRAIQTFRRKG 322
            L+   ++V ++ G ++ LA+   G VY++G  S+  LG  G +     PR I++     
Sbjct: 80  ALD-AQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSL--SD 136

Query: 323 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK-TLPEPLSSLKSHLAVQVC 381
           I +V+V+ G  H +AL  +  V+ WG+   G LG G +  K T P+ + SL     +QV 
Sbjct: 137 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQVA 196

Query: 382 ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYH 441
           A    +FVL  +G+++G+G   FG LG  D   +D+ + P +L SLR+  +  I  G  H
Sbjct: 197 AGGAHSFVLTLSGAIFGWGRNKFGQLGLNDE--NDRYV-PNLLKSLRSQKIVYICCGEDH 253

Query: 442 TVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF 477
           T  +T  G +F FG     QLGH++    + P ++F
Sbjct: 254 TAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVF 289



 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 105/333 (31%), Positives = 153/333 (45%), Gaps = 13/333 (3%)

Query: 135 GSSLCGVLGHGPETTQCVSFTRI-NFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSF 193
           G++  G LG G    + V   R  +F     V  V     H  FVL  G V+TCG N   
Sbjct: 5   GNASFGQLGLGGIDEEIVLEPRKSDFFINKKVQDVGCGLRHTVFVLDDGTVYTCGCNDLG 64

Query: 194 CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGH-GD 252
             GH  + +   +P  V AL       V+ G   T  L  +G V+  G ++ GQLG  G 
Sbjct: 65  QLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGS 121

Query: 253 TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ-HDELQ 311
                 P++I  L ++  +VQ+A G  + LA++    V+ +G      LG G     +  
Sbjct: 122 EECIRVPRNIKSLSDI-QIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTS 180

Query: 312 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSS 371
           P+ I++    GI  ++V+AG  H   L  SG ++ WG+   G LG  DE D+ +P  L S
Sbjct: 181 PQLIKSLL--GIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKS 238

Query: 372 LKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHH 431
           L+S   V +C  +  T  L   G V+ FG  G+G LG      +   + PR +  L    
Sbjct: 239 LRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG---HNSTSHEINPRKVFELMGSI 295

Query: 432 VSQISTGLYHT-VVVTDRGRLFGFGDNERAQLG 463
           V+QI+ G  HT   V   GR++ FG     QLG
Sbjct: 296 VTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 80/291 (27%), Positives = 138/291 (47%), Gaps = 8/291 (2%)

Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 179
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V VS  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVSCGEAHTLALN 100

Query: 180 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 239
             GQV+  G +S    G   +   I  PR +++L  +   QV  G   +  L+    V  
Sbjct: 101 DKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFC 160

Query: 240 CGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
            G N +GQLG G D   + +P+ I  L  +   +Q+AAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKYGQLGLGTDCKKQTSPQLIKSLLGI-PFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 299 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 358
             LG  +++D   P  +++ R + I  V +  G++H  AL   G V+T+G G  G LGH 
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRSQKI--VYICCGEDHTAALTKEGGVFTFGAGGYGQLGHN 277

Query: 359 DEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLG 408
               +  P  +  L   +  Q+ C R+  +  +  +G +Y FG  G G LG
Sbjct: 278 STSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  101 bits (252), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 84/274 (30%), Positives = 132/274 (48%), Gaps = 10/274 (3%)

Query: 98  QSVEHSSDIVETSAGNM-QITTGRYHTLLISNS-SVFSCGSSLCGVLGH-GPETTQCVSF 154
           +S +    +V   A N+  ++ G  HTL +++   V++ G    G LG  G E  +C+  
Sbjct: 70  KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSE--ECIRV 127

Query: 155 TR-INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEAL 213
            R I   S   +VQV+    H+  + ++ +VF  G N     G     +    P+L+++L
Sbjct: 128 PRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLIKSL 187

Query: 214 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
            G+P  QV AG   +  LT+ G +   G N  GQLG  D  DR  P  +  L     +V 
Sbjct: 188 LGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRS-QKIVY 246

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           I  G  +  A+T  G V++FG+G    LGH     E+ PR +  F   G  V +++ G +
Sbjct: 247 ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQ 304

Query: 334 HVVA-LDSSGYVYTWGKGYCGALGHGDEIDKTLP 366
           H  A + SSG +Y++G G  G LG G   ++  P
Sbjct: 305 HTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338



 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 77/251 (30%), Positives = 119/251 (47%), Gaps = 17/251 (6%)

Query: 70  IYA-GMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLISN 128
           +YA G+  + Q+ LL       +  +R  ++++  SDI       +Q+  G YH+L +S 
Sbjct: 105 VYAWGLDSDGQLGLLGS-----EECIRVPRNIKSLSDI-----QIVQVACGYYHSLALSK 154

Query: 129 SS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTC 187
           +S VF  G +  G LG G +  +  S   I        +QV+A   H+  +  SG +F  
Sbjct: 155 ASEVFCWGQNKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGW 214

Query: 188 GDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQ 247
           G N     G  D N   + P L+++L+      +  G + T  LT  G V T G+  +GQ
Sbjct: 215 GRNKFGQLGLNDENDR-YVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQ 273

Query: 248 LGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVVYSFGSGSNFCLGHGE 305
           LGH  T     P+ +   E +GS+V QIA G  +  A V  +G +YSFG G N  LG G 
Sbjct: 274 LGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGS 331

Query: 306 QHDELQPRAIQ 316
             +   P  ++
Sbjct: 332 TSNRKSPFTVK 342


>gi|260832812|ref|XP_002611351.1| hypothetical protein BRAFLDRAFT_73256 [Branchiostoma floridae]
 gi|229296722|gb|EEN67361.1| hypothetical protein BRAFLDRAFT_73256 [Branchiostoma floridae]
          Length = 1152

 Score =  127 bits (320), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 90/320 (28%), Positives = 153/320 (47%), Gaps = 21/320 (6%)

Query: 164 HVVQVSA--SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQV 221
            V++V+A     H   +   G+V++ G+      GH DTN            KG     +
Sbjct: 190 EVLKVAAHPEGKHYMALTSEGEVYSWGNGDGGRLGHGDTNV---------CYKGQKVLVI 240

Query: 222 TAGLNFTG----FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGS-VVQI 274
               +  G     LT  G V++ G+   G+LGHGDT  R  P  +  L  +++G  VV I
Sbjct: 241 VYPYHPEGKHYMALTSEGEVYSWGNGDGGRLGHGDTNSREEPTLVRGLSGKQLGRHVVHI 300

Query: 275 AAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEH 334
             G +Y  A+T +G ++++G G+   LGHG   D+L P  + + + + +  +   +GD  
Sbjct: 301 VCGSTYSAAITADGELFTWGRGNYGRLGHGSSEDQLTPTLVVSLKGRRVIDICCGSGDAQ 360

Query: 335 VVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 394
            +A+   G V++WG G  G LG G       P+ +  L+    V+VC   + +  L  TG
Sbjct: 361 TLAVTDDGTVWSWGDGDYGKLGRGGSDGCKTPKIIDRLQGQDIVRVCCGAQFSLALTKTG 420

Query: 395 SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 454
            ++ +G      LG    G  + +  P+ L+ LR   V  ++ G  H +V+T+ G ++G+
Sbjct: 421 HIWTWGKGDSQRLG---HGTEEHIRFPKQLEGLRGKKVVDVAVGSMHCLVMTEEGEVYGW 477

Query: 455 GDNERAQLGHDTLRGCLEPT 474
           G N++ QLG  +     +PT
Sbjct: 478 GRNDQGQLGDSSFSTKSDPT 497



 Score =  122 bits (305), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 103/340 (30%), Positives = 152/340 (44%), Gaps = 25/340 (7%)

Query: 119 GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
           G+++  L S   V+S G+   G LGHG +T  C    ++       V        H   +
Sbjct: 200 GKHYMALTSEGEVYSWGNGDGGRLGHG-DTNVCYKGQKV----LVIVYPYHPEGKHYMAL 254

Query: 179 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQ----VTAGLNFTGFLTIR 234
              G+V++ G+      GH DTN     P LV  L G    +    +  G  ++  +T  
Sbjct: 255 TSEGEVYSWGNGDGGRLGHGDTNSR-EEPTLVRGLSGKQLGRHVVHIVCGSTYSAAITAD 313

Query: 235 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQI--AAGPSYMLAVTGNGVVYS 292
           G + T G   +G+LGHG + D+ TP  +  L+    V+ I   +G +  LAVT +G V+S
Sbjct: 314 GELFTWGRGNYGRLGHGSSEDQLTPTLVVSLKGR-RVIDICCGSGDAQTLAVTDDGTVWS 372

Query: 293 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 352
           +G G    LG G       P+ I   R +G  +VRV  G +  +AL  +G+++TWGKG  
Sbjct: 373 WGDGDYGKLGRGGSDGCKTPKIID--RLQGQDIVRVCCGAQFSLALTKTGHIWTWGKGDS 430

Query: 353 GALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLG---F 409
             LGHG E     P+ L  L+    V V        V+ + G VYG+G    G LG   F
Sbjct: 431 QRLGHGTEEHIRFPKQLEGLRGKKVVDVAVGSMHCLVMTEEGEVYGWGRNDQGQLGDSSF 490

Query: 410 PDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRG 449
             +  SD  L P     L    +S I+ G   +   T  G
Sbjct: 491 STK--SDPTLMP-----LDGKSISGIACGPAQSFCWTSTG 523



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 62/225 (27%), Positives = 89/225 (39%), Gaps = 44/225 (19%)

Query: 265 LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH 324
           L E+G V+Q+A     ++A+T  G VY        C    E      P+ +++   K + 
Sbjct: 144 LGELG-VLQLACAERCLIALTKTGRVY-------MCFYSSESQG---PQLMESLADKEVL 192

Query: 325 VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARK 384
            V      +H +AL S G VY+WG G  G LGHGD                    VC + 
Sbjct: 193 KVAAHPEGKHYMALTSEGEVYSWGNGDGGRLGHGD------------------TNVCYKG 234

Query: 385 RKTFVLV--------------DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLR-A 429
           +K  V+V                G VY +G    G LG  D    ++    R L   +  
Sbjct: 235 QKVLVIVYPYHPEGKHYMALTSEGEVYSWGNGDGGRLGHGDTNSREEPTLVRGLSGKQLG 294

Query: 430 HHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPT 474
            HV  I  G  ++  +T  G LF +G     +LGH +    L PT
Sbjct: 295 RHVVHIVCGSTYSAAITADGELFTWGRGNYGRLGHGSSEDQLTPT 339


>gi|148694174|gb|EDL26121.1| mCG130390 [Mus musculus]
          Length = 4870

 Score =  127 bits (320), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 102/339 (30%), Positives = 167/339 (49%), Gaps = 17/339 (5%)

Query: 115  QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQV---SA 170
            Q+  G+  T +I +N +V +CG    G LG G      V  T I+      V Q+     
Sbjct: 4040 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHV-LTVISALQGFVVTQLVTSCG 4098

Query: 171  SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
            S+ H+  + +SG+VF+ GD      GH +++R   RPR +EAL+G    Q++ G   +  
Sbjct: 4099 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQMSCGFKHSAV 4157

Query: 231  LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSVVQIAAGPSYMLAVTGNG 288
            +T  G + T G+  +G+LG G+T ++  P+ +  LE  ++G   Q+A G ++ LAV+ +G
Sbjct: 4158 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIG---QVACGLNHTLAVSADG 4214

Query: 289  -VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 347
             +V++FG G    LG G    +  P+ +      GI + +V+ G +  VAL   G+VYT+
Sbjct: 4215 SMVWAFGDGDYGKLGLGNSTAKSSPQKVDVL--CGIGIKKVACGTQFSVALTKDGHVYTF 4272

Query: 348  GKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSL 407
            G+     L  G   +   P+ +  L   +   V      T  L  TG VY +G    G L
Sbjct: 4273 GQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQL 4332

Query: 408  GFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT 446
            G    G ++ V  P ++  L+  ++ QIS G  H+   T
Sbjct: 4333 GL---GHTNHVREPTLVTVLQGKNIRQISAGRCHSAAWT 4368



 Score =  109 bits (273), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 91/315 (28%), Positives = 144/315 (45%), Gaps = 25/315 (7%)

Query: 160 PSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTN------RPIFRPRLVEAL 213
           PS +    + A +     +   G V  CG  S    G  D+N      +  F P    ++
Sbjct: 400 PSFSDAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPH--RSI 457

Query: 214 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
           K V   + + G   T   T  G V + G   +G+LGHG++  +  PK I    +   VV 
Sbjct: 458 KKVSSSKGSDG--HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVC 515

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           ++AG  +  AVT +G +Y++G G    LGHG+ +     R I T  +   +V  VS G  
Sbjct: 516 VSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNS----RNIPTLVKDISNVGEVSCGSS 571

Query: 334 HVVALDSSGY-VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVD 392
           H +AL   G  V+++G G  G LGHGD      P+ + +L+     +VCA  + +  L  
Sbjct: 572 HTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTS 631

Query: 393 TGSVYGFG---WMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRG 449
           TG VY +G    +G GS            LRP++++ L A  +  IS G  H + ++   
Sbjct: 632 TGQVYAWGCGACLGCGS-------SEATALRPKLIEELAATRIVDISIGDSHCLSLSHDN 684

Query: 450 RLFGFGDNERAQLGH 464
            ++ +G+N   Q G 
Sbjct: 685 EVYAWGNNSMGQCGQ 699



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 87/324 (26%), Positives = 150/324 (46%), Gaps = 13/324 (4%)

Query: 160  PSAAHVVQVSASENHAAFVLQS-GQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPC 218
            PS +   QV   +N   FV+Q+ G V  CG+ S    G  +++  +    ++ AL+G   
Sbjct: 4033 PSFSQAQQVICGQN-CTFVIQANGTVLACGEGSYGRLGQGNSDD-LHVLTVISALQGFVV 4090

Query: 219  KQVTAGLNFTGF---LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA 275
             Q+       G    LT  G V + G   +G+LGHG++  +  P+ I  L+    VVQ++
Sbjct: 4091 TQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQG-EEVVQMS 4149

Query: 276  AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHV 335
             G  +   VT +G +++FG+G    LG G   ++  P  +     +G  + +V+ G  H 
Sbjct: 4150 CGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTAL--EGYQIGQVACGLNHT 4207

Query: 336  VALDSSG-YVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 394
            +A+ + G  V+ +G G  G LG G+   K+ P+ +  L      +V    + +  L   G
Sbjct: 4208 LAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDG 4267

Query: 395  SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 454
             VY FG      +G P+ G +    RP+ +  L    +  ++ G  HT+ +   G ++ +
Sbjct: 4268 HVYTFGQDRL--IGLPE-GRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAW 4324

Query: 455  GDNERAQLGHDTLRGCLEPTEIFI 478
            G N   QLG        EPT + +
Sbjct: 4325 GSNSEGQLGLGHTNHVREPTLVTV 4348



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 89/266 (33%), Positives = 128/266 (48%), Gaps = 14/266 (5%)

Query: 122 HTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
           HTL   +   VFS G    G LGHG  +TQ              VV VSA   H+A V +
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528

Query: 181 SGQVFTCGDNSSFCCGHRDTN-RPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH-VH 238
            G+++T G+      GH D+N R I  P LV+ +  V   +V+ G + T  L+  G  V 
Sbjct: 529 DGELYTWGEGDFGRLGHGDSNSRNI--PTLVKDISNV--GEVSCGSSHTIALSKDGRTVW 584

Query: 239 TCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
           + G   +G+LGHGDT     PK I  L+ +  + ++ AG    LA+T  G VY++G G+ 
Sbjct: 585 SFGGGDNGKLGHGDTNRVYKPKVIEALQGM-FIRKVCAGSQSSLALTSTGQVYAWGCGA- 642

Query: 299 FCLGHG-EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 357
            CLG G  +   L+P+ I+        +V +S GD H ++L     VY WG    G  G 
Sbjct: 643 -CLGCGSSEATALRPKLIEEL--AATRIVDISIGDSHCLSLSHDNEVYAWGNNSMGQCGQ 699

Query: 358 GDEIDK-TLPEPLSSLKSHLAVQVCA 382
           G+     T P+ +S L      Q+ A
Sbjct: 700 GNSTGPITKPKKVSGLDGIAIQQISA 725



 Score = 84.7 bits (208), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 68/230 (29%), Positives = 108/230 (46%), Gaps = 11/230 (4%)

Query: 237  VHTCGSNTHGQLGH-GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 295
            V+  G+  HGQL   G  +  P   + AP        Q+  G +    +  NG V + G 
Sbjct: 4008 VYLWGAGRHGQLAEAGRNVMVP---ATAP--SFSQAQQVICGQNCTFVIQANGTVLACGE 4062

Query: 296  GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG-DEHVVALDSSGYVYTWGKGYCGA 354
            GS   LG G   D      I   +   +  +  S G D H +AL  SG V++WG G  G 
Sbjct: 4063 GSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGK 4122

Query: 355  LGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGV 414
            LGHG+   +  P  + +L+    VQ+    + + V+   G ++ FG   +G LG  +   
Sbjct: 4123 LGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN--T 4180

Query: 415  SDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRL-FGFGDNERAQLG 463
            S+K L P  + +L  + + Q++ GL HT+ V+  G + + FGD +  +LG
Sbjct: 4181 SNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLG 4229



 Score = 59.7 bits (143), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 49/180 (27%), Positives = 82/180 (45%), Gaps = 13/180 (7%)

Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 349
           VY +GS S+  L  G Q   LQP+   +F         + AG      + + G V   GK
Sbjct: 374 VYVWGSNSSHQLVEGTQEKILQPKLAPSFS----DAQTIEAGQYCTFVISTDGSVRACGK 429

Query: 350 GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKR----KTFVLVDTGSVYGFGWMGFG 405
           G  G LG GD  +++  + L + + H +++  +  +     T      G V+ +G   +G
Sbjct: 430 GSYGRLGLGDSNNQSTLKKL-TFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYG 488

Query: 406 SLGFPDRGVSDKVLRPRILD-SLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 464
            LG    G S     P+++   L+   V  +S G  H+  VT+ G L+ +G+ +  +LGH
Sbjct: 489 KLG---HGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGH 545



 Score = 49.3 bits (116), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 41/143 (28%), Positives = 67/143 (46%), Gaps = 9/143 (6%)

Query: 344  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 403
            VY WG G  G L    E  + +  P ++     A QV   +  TFV+   G+V   G   
Sbjct: 4008 VYLWGAGRHGQLA---EAGRNVMVPATAPSFSQAQQVICGQNCTFVIQANGTVLACGEGS 4064

Query: 404  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLY---HTVVVTDRGRLFGFGDNERA 460
            +G LG   +G SD +    ++ +L+   V+Q+ T      H++ +T+ G +F +GD +  
Sbjct: 4065 YGRLG---QGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYG 4121

Query: 461  QLGHDTLRGCLEPTEIFIQEMEE 483
            +LGH        P +I   + EE
Sbjct: 4122 KLGHGNSDRQRRPRQIEALQGEE 4144



 Score = 48.5 bits (114), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 28/100 (28%), Positives = 48/100 (48%), Gaps = 2/100 (2%)

Query: 125 LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQV 184
           L S   V++ G   C  LG G      +    I   +A  +V +S  ++H   +    +V
Sbjct: 629 LTSTGQVYAWGCGAC--LGCGSSEATALRPKLIEELAATRIVDISIGDSHCLSLSHDNEV 686

Query: 185 FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           +  G+NS   CG  ++  PI +P+ V  L G+  +Q++AG
Sbjct: 687 YAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAG 726


>gi|1477565|gb|AAD12586.1| p532 [Homo sapiens]
          Length = 4861

 Score =  127 bits (320), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 103/339 (30%), Positives = 166/339 (48%), Gaps = 17/339 (5%)

Query: 115  QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQV---SA 170
            Q+  G+  T +I +N +V +CG    G LG G      V  T I+      V Q+     
Sbjct: 4031 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHV-LTVISALQGFVVTQLVTSCG 4089

Query: 171  SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
            S+ H+  + +SG+VF+ GD      GH +++R   RPR +EAL+G    Q++ G   +  
Sbjct: 4090 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQMSCGFKHSAV 4148

Query: 231  LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSVVQIAAGPSYMLAVTGNG 288
            +T  G + T G+  +G+LG G+T ++  P+ +  LE  ++G   Q+A G ++ LAV+ +G
Sbjct: 4149 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIG---QVACGLNHTLAVSADG 4205

Query: 289  -VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 347
             +V++FG G    LG G    +  P+ I      GI + +V+ G +  VAL   G+VYT+
Sbjct: 4206 SMVWAFGDGDYGKLGLGNSTAKSSPQKIDVL--CGIGIKKVACGTQFSVALTKDGHVYTF 4263

Query: 348  GKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSL 407
            G+     L  G   +   P+ +  L   +   V      T  L   G VY +G    G L
Sbjct: 4264 GQDRLIGLPEGRARNHNRPQQIPVLAGVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQL 4323

Query: 408  GFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT 446
            G    G ++ V  P ++  L+  +V QIS G  H+   T
Sbjct: 4324 GL---GHTNHVREPTLVTGLQGKNVRQISAGRCHSAAWT 4359



 Score =  109 bits (273), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 105/379 (27%), Positives = 165/379 (43%), Gaps = 29/379 (7%)

Query: 96  FLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFT 155
           F +    +SD   T A    I TG    ++     V+  GS+    L  G   TQ     
Sbjct: 340 FEEVCRMASDYSRTCASPDSIQTGDA-PIVSETCEVYVWGSNSSHQLVEG---TQEKILQ 395

Query: 156 RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTN------RPIFRPRL 209
               PS +    + A +     +   G V  CG  S    G  D+N      +  F P  
Sbjct: 396 PKLAPSFSDAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPH- 454

Query: 210 VEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG 269
             ++K V   + + G   T   T  G V + G   +G+LGHG++  +  PK I    +  
Sbjct: 455 -RSIKKVSSSKGSDG--HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGK 511

Query: 270 SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS 329
            VV ++AG  +  AVT +G +Y++G G    LGHG+ +     R I T  +   +V  VS
Sbjct: 512 VVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNS----RNIPTLVKDISNVGEVS 567

Query: 330 AGDEHVVALDSSGY-VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTF 388
            G  H +AL   G  V+++G G  G LGHGD      P+ + +L+     +VCA  + + 
Sbjct: 568 CGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSL 627

Query: 389 VLVDTGSVYGFG---WMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVV 445
            L  TG VY +G    +G GS            LRP++++ L A  +  +S G  H + +
Sbjct: 628 ALTSTGQVYAWGCGACLGCGS-------SEATALRPKLIEELAATRIVDVSIGDSHCLAL 680

Query: 446 TDRGRLFGFGDNERAQLGH 464
           +    ++ +G+N   Q G 
Sbjct: 681 SHDNEVYAWGNNSMGQCGQ 699



 Score = 98.6 bits (244), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 91/266 (34%), Positives = 128/266 (48%), Gaps = 14/266 (5%)

Query: 122 HTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
           HTL   +   VFS G    G LGHG  +TQ              VV VSA   H+A V +
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528

Query: 181 SGQVFTCGDNSSFCCGHRDTN-RPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH-VH 238
            G+++T G+      GH D+N R I  P LV+ +  V   +V+ G + T  L+  G  V 
Sbjct: 529 DGELYTWGEGDFGRLGHGDSNSRNI--PTLVKDISNV--GEVSCGSSHTIALSKDGRTVW 584

Query: 239 TCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
           + G   +G+LGHGDT     PK I  L+ +  + ++ AG    LA+T  G VY++G G+ 
Sbjct: 585 SFGGGDNGKLGHGDTNRVYKPKVIEALQGM-FIRKVCAGSQSSLALTSTGQVYAWGCGA- 642

Query: 299 FCLGHG-EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 357
            CLG G  +   L+P+ I+        +V VS GD H +AL     VY WG    G  G 
Sbjct: 643 -CLGCGSSEATALRPKLIEEL--AATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQ 699

Query: 358 GDEIDK-TLPEPLSSLKSHLAVQVCA 382
           G+     T P+ +S L      Q+ A
Sbjct: 700 GNSTGPITKPKKVSGLDGIAIQQISA 725



 Score = 97.4 bits (241), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 87/320 (27%), Positives = 148/320 (46%), Gaps = 13/320 (4%)

Query: 160  PSAAHVVQVSASENHAAFVLQS-GQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPC 218
            PS +   QV   +N   FV+Q+ G V  CG+ S    G  +++  +    ++ AL+G   
Sbjct: 4024 PSFSQAQQVICGQN-CTFVIQANGTVLACGEGSYGRLGQGNSDD-LHVLTVISALQGFVV 4081

Query: 219  KQVTAGLNFTGF---LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA 275
             Q+       G    LT  G V + G   +G+LGHG++  +  P+ I  L+    VVQ++
Sbjct: 4082 TQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQG-EEVVQMS 4140

Query: 276  AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHV 335
             G  +   VT +G +++FG+G    LG G   ++  P  +     +G  + +V+ G  H 
Sbjct: 4141 CGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTAL--EGYQIGQVACGLNHT 4198

Query: 336  VALDSSG-YVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 394
            +A+ + G  V+ +G G  G LG G+   K+ P+ +  L      +V    + +  L   G
Sbjct: 4199 LAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDG 4258

Query: 395  SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 454
             VY FG      +G P+ G +    RP+ +  L    +  ++ G  HT+ +   G ++ +
Sbjct: 4259 HVYTFGQDRL--IGLPE-GRARNHNRPQQIPVLAGVIIEDVAVGAEHTLALASNGDVYAW 4315

Query: 455  GDNERAQLGHDTLRGCLEPT 474
            G N   QLG        EPT
Sbjct: 4316 GSNSEGQLGLGHTNHVREPT 4335



 Score = 84.7 bits (208), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 68/230 (29%), Positives = 108/230 (46%), Gaps = 11/230 (4%)

Query: 237  VHTCGSNTHGQLGH-GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 295
            V+  G+  HGQL   G  +  P   + AP        Q+  G +    +  NG V + G 
Sbjct: 3999 VYLWGAGRHGQLAEAGRNVMVP---AAAP--SFSQAQQVICGQNCTFVIQANGTVLACGE 4053

Query: 296  GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG-DEHVVALDSSGYVYTWGKGYCGA 354
            GS   LG G   D      I   +   +  +  S G D H +AL  SG V++WG G  G 
Sbjct: 4054 GSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGK 4113

Query: 355  LGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGV 414
            LGHG+   +  P  + +L+    VQ+    + + V+   G ++ FG   +G LG  +   
Sbjct: 4114 LGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN--T 4171

Query: 415  SDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRL-FGFGDNERAQLG 463
            S+K L P  + +L  + + Q++ GL HT+ V+  G + + FGD +  +LG
Sbjct: 4172 SNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLG 4220



 Score = 49.3 bits (116), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 29/100 (29%), Positives = 48/100 (48%), Gaps = 2/100 (2%)

Query: 125 LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQV 184
           L S   V++ G   C  LG G      +    I   +A  +V VS  ++H   +    +V
Sbjct: 629 LTSTGQVYAWGCGAC--LGCGSSEATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEV 686

Query: 185 FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           +  G+NS   CG  ++  PI +P+ V  L G+  +Q++AG
Sbjct: 687 YAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAG 726



 Score = 48.9 bits (115), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 41/143 (28%), Positives = 67/143 (46%), Gaps = 9/143 (6%)

Query: 344  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 403
            VY WG G  G L    E  + +  P ++     A QV   +  TFV+   G+V   G   
Sbjct: 3999 VYLWGAGRHGQLA---EAGRNVMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGS 4055

Query: 404  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLY---HTVVVTDRGRLFGFGDNERA 460
            +G LG   +G SD +    ++ +L+   V+Q+ T      H++ +T+ G +F +GD +  
Sbjct: 4056 YGRLG---QGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYG 4112

Query: 461  QLGHDTLRGCLEPTEIFIQEMEE 483
            +LGH        P +I   + EE
Sbjct: 4113 KLGHGNSDRQRRPRQIEALQGEE 4135


>gi|281347310|gb|EFB22894.1| hypothetical protein PANDA_002155 [Ailuropoda melanoleuca]
          Length = 4871

 Score =  127 bits (320), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 103/339 (30%), Positives = 167/339 (49%), Gaps = 17/339 (5%)

Query: 115  QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQV---SA 170
            Q+  G+  T +I +N +V +CG    G LG G      V  T I+      V Q+     
Sbjct: 4040 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHV-LTVISALQGFVVTQLVTSCG 4098

Query: 171  SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
            S+ H+  + +SG+VF+ GD      GH +++R   RPR +EAL+G    Q++ G   +  
Sbjct: 4099 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQMSCGFKHSAV 4157

Query: 231  LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSVVQIAAGPSYMLAVTGNG 288
            +T  G + T G+  +G+LG G+T ++  P+ +  LE  ++G   Q+A G ++ LAV+ +G
Sbjct: 4158 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIG---QVACGLNHTLAVSADG 4214

Query: 289  -VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 347
             +V++FG G    LG G    +  P+ +      GI + +V+ G +  VAL   G+VYT+
Sbjct: 4215 SMVWAFGDGDYGKLGLGNSTAKSSPQKVDVL--CGIGIKKVACGTQFSVALTKDGHVYTF 4272

Query: 348  GKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSL 407
            G+     L  G   +   P+ +  L   +   V      T  L  TG VY +G    G L
Sbjct: 4273 GQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQL 4332

Query: 408  GFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT 446
            G    G ++ V  P ++  L+  +V QIS G  H+   T
Sbjct: 4333 GL---GHTNHVREPTLVTVLQGKNVRQISAGRCHSAAWT 4368



 Score =  109 bits (273), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 91/315 (28%), Positives = 144/315 (45%), Gaps = 25/315 (7%)

Query: 160 PSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTN------RPIFRPRLVEAL 213
           PS +    + A +     +   G V  CG  S    G  D+N      +  F P    ++
Sbjct: 400 PSFSDAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPH--RSI 457

Query: 214 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
           K V   + + G   T   T  G V + G   +G+LGHG++  +  PK I    +   VV 
Sbjct: 458 KKVSSSKGSDG--HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVC 515

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           ++AG  +  AVT +G +Y++G G    LGHG+ +     R I T  +   +V  VS G  
Sbjct: 516 VSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNS----RNIPTLVKDISNVGEVSCGSS 571

Query: 334 HVVALDSSGY-VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVD 392
           H +AL   G  V+++G G  G LGHGD      P+ + +L+     +VCA  + +  L  
Sbjct: 572 HTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVVEALQGMFIRKVCAGSQSSLALTS 631

Query: 393 TGSVYGFG---WMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRG 449
           TG VY +G    +G GS            LRP++++ L A  +  IS G  H + ++   
Sbjct: 632 TGQVYAWGCGACLGCGS-------SEATALRPKLIEELAATRIVDISIGDSHCLALSHDN 684

Query: 450 RLFGFGDNERAQLGH 464
            ++ +G+N   Q G 
Sbjct: 685 EVYAWGNNSMGQCGQ 699



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 89/266 (33%), Positives = 128/266 (48%), Gaps = 14/266 (5%)

Query: 122 HTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
           HTL   +   VFS G    G LGHG  +TQ              VV VSA   H+A V +
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528

Query: 181 SGQVFTCGDNSSFCCGHRDTN-RPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH-VH 238
            G+++T G+      GH D+N R I  P LV+ +  V   +V+ G + T  L+  G  V 
Sbjct: 529 DGELYTWGEGDFGRLGHGDSNSRNI--PTLVKDISNV--GEVSCGSSHTIALSKDGRTVW 584

Query: 239 TCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
           + G   +G+LGHGDT     PK +  L+ +  + ++ AG    LA+T  G VY++G G+ 
Sbjct: 585 SFGGGDNGKLGHGDTNRVYKPKVVEALQGM-FIRKVCAGSQSSLALTSTGQVYAWGCGA- 642

Query: 299 FCLGHG-EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 357
            CLG G  +   L+P+ I+        +V +S GD H +AL     VY WG    G  G 
Sbjct: 643 -CLGCGSSEATALRPKLIEEL--AATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQ 699

Query: 358 GDEIDK-TLPEPLSSLKSHLAVQVCA 382
           G+     T P+ +S L      Q+ A
Sbjct: 700 GNSTGPITKPKKVSGLDGIAIQQISA 725



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 87/324 (26%), Positives = 150/324 (46%), Gaps = 13/324 (4%)

Query: 160  PSAAHVVQVSASENHAAFVLQS-GQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPC 218
            PS +   QV   +N   FV+Q+ G V  CG+ S    G  +++  +    ++ AL+G   
Sbjct: 4033 PSFSQAQQVICGQN-CTFVIQANGTVLACGEGSYGRLGQGNSDD-LHVLTVISALQGFVV 4090

Query: 219  KQVTAGLNFTGF---LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA 275
             Q+       G    LT  G V + G   +G+LGHG++  +  P+ I  L+    VVQ++
Sbjct: 4091 TQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQG-EEVVQMS 4149

Query: 276  AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHV 335
             G  +   VT +G +++FG+G    LG G   ++  P  +     +G  + +V+ G  H 
Sbjct: 4150 CGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTAL--EGYQIGQVACGLNHT 4207

Query: 336  VALDSSG-YVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 394
            +A+ + G  V+ +G G  G LG G+   K+ P+ +  L      +V    + +  L   G
Sbjct: 4208 LAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDG 4267

Query: 395  SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 454
             VY FG      +G P+ G +    RP+ +  L    +  ++ G  HT+ +   G ++ +
Sbjct: 4268 HVYTFGQDRL--IGLPE-GRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAW 4324

Query: 455  GDNERAQLGHDTLRGCLEPTEIFI 478
            G N   QLG        EPT + +
Sbjct: 4325 GSNSEGQLGLGHTNHVREPTLVTV 4348



 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 68/230 (29%), Positives = 108/230 (46%), Gaps = 11/230 (4%)

Query: 237  VHTCGSNTHGQLGH-GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 295
            V+  G+  HGQL   G  +  P   + AP        Q+  G +    +  NG V + G 
Sbjct: 4008 VYLWGAGRHGQLAEAGRNVMVP---AAAP--SFSQAQQVICGQNCTFVIQANGTVLACGE 4062

Query: 296  GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG-DEHVVALDSSGYVYTWGKGYCGA 354
            GS   LG G   D      I   +   +  +  S G D H +AL  SG V++WG G  G 
Sbjct: 4063 GSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGK 4122

Query: 355  LGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGV 414
            LGHG+   +  P  + +L+    VQ+    + + V+   G ++ FG   +G LG  +   
Sbjct: 4123 LGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN--T 4180

Query: 415  SDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRL-FGFGDNERAQLG 463
            S+K L P  + +L  + + Q++ GL HT+ V+  G + + FGD +  +LG
Sbjct: 4181 SNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLG 4229



 Score = 59.7 bits (143), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 49/180 (27%), Positives = 82/180 (45%), Gaps = 13/180 (7%)

Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 349
           VY +GS S+  L  G Q   LQP+   +F         + AG      + + G V   GK
Sbjct: 374 VYVWGSNSSHQLVEGTQEKILQPKLAPSFS----DAQTIEAGQYCTFVISTDGSVRACGK 429

Query: 350 GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKR----KTFVLVDTGSVYGFGWMGFG 405
           G  G LG GD  +++  + L + + H +++  +  +     T      G V+ +G   +G
Sbjct: 430 GSYGRLGLGDSNNQSTLKKL-TFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYG 488

Query: 406 SLGFPDRGVSDKVLRPRILD-SLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 464
            LG    G S     P+++   L+   V  +S G  H+  VT+ G L+ +G+ +  +LGH
Sbjct: 489 KLG---HGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGH 545



 Score = 48.9 bits (115), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 41/143 (28%), Positives = 67/143 (46%), Gaps = 9/143 (6%)

Query: 344  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 403
            VY WG G  G L    E  + +  P ++     A QV   +  TFV+   G+V   G   
Sbjct: 4008 VYLWGAGRHGQLA---EAGRNVMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGS 4064

Query: 404  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLY---HTVVVTDRGRLFGFGDNERA 460
            +G LG   +G SD +    ++ +L+   V+Q+ T      H++ +T+ G +F +GD +  
Sbjct: 4065 YGRLG---QGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYG 4121

Query: 461  QLGHDTLRGCLEPTEIFIQEMEE 483
            +LGH        P +I   + EE
Sbjct: 4122 KLGHGNSDRQRRPRQIEALQGEE 4144



 Score = 48.5 bits (114), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 28/100 (28%), Positives = 48/100 (48%), Gaps = 2/100 (2%)

Query: 125 LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQV 184
           L S   V++ G   C  LG G      +    I   +A  +V +S  ++H   +    +V
Sbjct: 629 LTSTGQVYAWGCGAC--LGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEV 686

Query: 185 FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           +  G+NS   CG  ++  PI +P+ V  L G+  +Q++AG
Sbjct: 687 YAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAG 726


>gi|344293366|ref|XP_003418394.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Loxodonta
            africana]
          Length = 4858

 Score =  127 bits (320), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 103/339 (30%), Positives = 167/339 (49%), Gaps = 17/339 (5%)

Query: 115  QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQV---SA 170
            Q+  G+  T +I +N +V +CG    G LG G      V  T I+      V Q+     
Sbjct: 4028 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHV-LTVISALQGFVVTQLVTSCG 4086

Query: 171  SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
            S+ H+  + +SG+VF+ GD      GH +++R   RPR +EAL+G    Q++ G   +  
Sbjct: 4087 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQMSCGFKHSAV 4145

Query: 231  LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSVVQIAAGPSYMLAVTGNG 288
            +T  G + T G+  +G+LG G+T ++  P+ +  LE  ++G   Q+A G ++ LAV+ +G
Sbjct: 4146 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIG---QVACGLNHTLAVSSDG 4202

Query: 289  -VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 347
             +V++FG G    LG G    +  P+ +      GI + +V+ G +  VAL   G+VYT+
Sbjct: 4203 SMVWAFGDGDYGKLGLGNSTAKSSPQKVDVL--CGIGIKKVACGTQFSVALTKDGHVYTF 4260

Query: 348  GKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSL 407
            G+     L  G   +   P+ +  L   +   V      T  L  TG VY +G    G L
Sbjct: 4261 GQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQL 4320

Query: 408  GFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT 446
            G    G ++ V  P ++  L+  +V QIS G  H+   T
Sbjct: 4321 GL---GHTNHVREPTLVTVLQGKNVRQISAGRCHSAAWT 4356



 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 106/379 (27%), Positives = 165/379 (43%), Gaps = 29/379 (7%)

Query: 96  FLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFT 155
           F +    +SD   T A    I TG    L+     V+  GS+    L  G   TQ     
Sbjct: 340 FEEVCRMASDYSRTCASPDSIQTGDA-PLVSETCEVYVWGSNSSHQLVEG---TQEKILQ 395

Query: 156 RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTN------RPIFRPRL 209
               PS +    + A +     +   G V  CG  S    G  D+N      +  F P  
Sbjct: 396 PKLAPSFSDAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPH- 454

Query: 210 VEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG 269
             +++ V   + + G   T   T  G V + G   +G+LGHG++  +  PK I    +  
Sbjct: 455 -RSIRKVSSSKGSDG--HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGK 511

Query: 270 SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS 329
            VV ++AG  +  AVT +G +Y++G G    LGHG+ +     R I T  +   +V  VS
Sbjct: 512 VVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNS----RNIPTLVKDISNVGEVS 567

Query: 330 AGDEHVVALDSSGY-VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTF 388
            G  H +AL   G  V+++G G  G LGHGD      P+ + +L+     +VCA  + + 
Sbjct: 568 CGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSL 627

Query: 389 VLVDTGSVYGFG---WMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVV 445
            L  TG VY +G    +G GS            LRP++++ L A  +  IS G  H + +
Sbjct: 628 ALTSTGQVYAWGCGACLGCGS-------SEATALRPKLIEELAATRIVDISIGDSHCLAL 680

Query: 446 TDRGRLFGFGDNERAQLGH 464
           +    ++ +G+N   Q G 
Sbjct: 681 SHDNEVYAWGNNSMGQCGQ 699



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 88/324 (27%), Positives = 150/324 (46%), Gaps = 13/324 (4%)

Query: 160  PSAAHVVQVSASENHAAFVLQS-GQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPC 218
            PS +   QV   +N   FV+Q+ G V  CG+ S    G  +++  +    ++ AL+G   
Sbjct: 4021 PSFSQAQQVICGQN-CTFVIQANGTVLACGEGSYGRLGQGNSDD-LHVLTVISALQGFVV 4078

Query: 219  KQVTAGLNFTGF---LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA 275
             Q+       G    LT  G V + G   +G+LGHG++  +  P+ I  L+    VVQ++
Sbjct: 4079 TQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQG-EEVVQMS 4137

Query: 276  AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHV 335
             G  +   VT +G +++FG+G    LG G   ++  P  +     +G  + +V+ G  H 
Sbjct: 4138 CGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTAL--EGYQIGQVACGLNHT 4195

Query: 336  VALDSSG-YVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 394
            +A+ S G  V+ +G G  G LG G+   K+ P+ +  L      +V    + +  L   G
Sbjct: 4196 LAVSSDGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDG 4255

Query: 395  SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 454
             VY FG      +G P+ G +    RP+ +  L    +  ++ G  HT+ +   G ++ +
Sbjct: 4256 HVYTFGQDRL--IGLPE-GRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAW 4312

Query: 455  GDNERAQLGHDTLRGCLEPTEIFI 478
            G N   QLG        EPT + +
Sbjct: 4313 GSNSEGQLGLGHTNHVREPTLVTV 4336



 Score = 85.1 bits (209), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 68/230 (29%), Positives = 108/230 (46%), Gaps = 11/230 (4%)

Query: 237  VHTCGSNTHGQLGH-GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 295
            V+  G+  HGQL   G  +  P   + AP        Q+  G +    +  NG V + G 
Sbjct: 3996 VYLWGAGRHGQLAEAGRNVMVP---AAAP--SFSQAQQVICGQNCTFVIQANGTVLACGE 4050

Query: 296  GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG-DEHVVALDSSGYVYTWGKGYCGA 354
            GS   LG G   D      I   +   +  +  S G D H +AL  SG V++WG G  G 
Sbjct: 4051 GSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGK 4110

Query: 355  LGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGV 414
            LGHG+   +  P  + +L+    VQ+    + + V+   G ++ FG   +G LG  +   
Sbjct: 4111 LGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN--T 4168

Query: 415  SDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRL-FGFGDNERAQLG 463
            S+K L P  + +L  + + Q++ GL HT+ V+  G + + FGD +  +LG
Sbjct: 4169 SNKKL-PERVTALEGYQIGQVACGLNHTLAVSSDGSMVWAFGDGDYGKLG 4217



 Score = 48.9 bits (115), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 41/143 (28%), Positives = 67/143 (46%), Gaps = 9/143 (6%)

Query: 344  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 403
            VY WG G  G L    E  + +  P ++     A QV   +  TFV+   G+V   G   
Sbjct: 3996 VYLWGAGRHGQLA---EAGRNVMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGS 4052

Query: 404  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLY---HTVVVTDRGRLFGFGDNERA 460
            +G LG   +G SD +    ++ +L+   V+Q+ T      H++ +T+ G +F +GD +  
Sbjct: 4053 YGRLG---QGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYG 4109

Query: 461  QLGHDTLRGCLEPTEIFIQEMEE 483
            +LGH        P +I   + EE
Sbjct: 4110 KLGHGNSDRQRRPRQIEALQGEE 4132



 Score = 48.9 bits (115), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 28/100 (28%), Positives = 48/100 (48%), Gaps = 2/100 (2%)

Query: 125 LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQV 184
           L S   V++ G   C  LG G      +    I   +A  +V +S  ++H   +    +V
Sbjct: 629 LTSTGQVYAWGCGAC--LGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEV 686

Query: 185 FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           +  G+NS   CG  ++  PI +P+ V  L G+  +Q++AG
Sbjct: 687 YAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAG 726


>gi|326496164|dbj|BAJ90703.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 907

 Score =  127 bits (320), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 103/327 (31%), Positives = 156/327 (47%), Gaps = 24/327 (7%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V  V     HA+ V ++G+VFT G++S    GH  T      PRLVE+L       V  G
Sbjct: 79  VYHVDCGVRHASLVTRNGEVFTWGEDSGGRLGH-GTREDSVHPRLVESLAASNIDFVACG 137

Query: 225 LNFTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSYM 281
              T  +T  G ++T G  TH  G LGHG  +    P+ I+ PLE +  +  ++ G  + 
Sbjct: 138 EFHTCAVTTTGELYTWGDGTHNVGLLGHGTDVGHWIPRRISGPLEGL-QIAYVSCGTWHT 196

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD-- 339
             +T  G +++FG GS   LGHG       PR +++    G+  + V+ G  H  A+   
Sbjct: 197 ALITSMGQLFTFGDGSFGVLGHGNVKSISCPREVESL--SGLKTIAVACGVWHTAAIVEV 254

Query: 340 ---------SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVL 390
                    S+G ++TWG G    LGHGD+  +  P  ++SL  +   +V      T  L
Sbjct: 255 IVTQSSATVSAGKLFTWGDGDKHRLGHGDKEARLKPTCVASLIDYDFYRVACGHSLTVGL 314

Query: 391 VDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRIL-DSLRAHHVSQISTGLYHTVVVTDRG 449
             +G V+  G   +G LG P+   SD   RP ++ D + + HV QI+ G YH  V+T R 
Sbjct: 315 TTSGKVWTMGNSVYGQLGNPN---SDG--RPCLVEDKIASEHVLQIACGSYHVAVLTSRS 369

Query: 450 RLFGFGDNERAQLGHDTLRGCLEPTEI 476
            +F +G     +LGH  +     PT +
Sbjct: 370 EVFTWGKGANGRLGHGDVEDRKVPTTV 396



 Score = 95.9 bits (237), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 84/286 (29%), Positives = 135/286 (47%), Gaps = 25/286 (8%)

Query: 106 IVET-SAGNMQ-ITTGRYHTLLISNSS---VFSCGSSLCGVLGHGPETTQCVSFTRINFP 160
           +VE+ +A N+  +  G +HT  ++ +     +  G+   G+LGHG +    +   RI+ P
Sbjct: 122 LVESLAASNIDFVACGEFHTCAVTTTGELYTWGDGTHNVGLLGHGTDVGHWIP-RRISGP 180

Query: 161 -SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCK 219
                +  VS    H A +   GQ+FT GD S    GH +  + I  PR VE+L G+   
Sbjct: 181 LEGLQIAYVSCGTWHTALITSMGQLFTFGDGSFGVLGHGNV-KSISCPREVESLSGLKTI 239

Query: 220 QVTAGLNFTGFLT-----------IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEV 268
            V  G+  T  +              G + T G     +LGHGD   R  P  +A L + 
Sbjct: 240 AVACGVWHTAAIVEVIVTQSSATVSAGKLFTWGDGDKHRLGHGDKEARLKPTCVASLIDY 299

Query: 269 GSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH-GEQHDELQPRAIQTFRRKGIHVVR 327
               ++A G S  + +T +G V++ G   N   G  G  + + +P  ++  +    HV++
Sbjct: 300 -DFYRVACGHSLTVGLTTSGKVWTMG---NSVYGQLGNPNSDGRPCLVED-KIASEHVLQ 354

Query: 328 VSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
           ++ G  HV  L S   V+TWGKG  G LGHGD  D+ +P  + +L+
Sbjct: 355 IACGSYHVAVLTSRSEVFTWGKGANGRLGHGDVEDRKVPTTVEALR 400



 Score = 91.7 bits (226), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 75/243 (30%), Positives = 116/243 (47%), Gaps = 25/243 (10%)

Query: 252 DTLDRPTPKS----IAPLEE--VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGE 305
           DT+ R T K+      PLE   V  V  +  G  +   VT NG V+++G  S   LGHG 
Sbjct: 54  DTVIRSTGKTDFLLPKPLESNLVLDVYHVDCGVRHASLVTRNGEVFTWGEDSGGRLGHGT 113

Query: 306 QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY--CGALGHGDEIDK 363
           + D + PR +++     I    V+ G+ H  A+ ++G +YTWG G    G LGHG ++  
Sbjct: 114 REDSVHPRLVESLAASNIDF--VACGEFHTCAVTTTGELYTWGDGTHNVGLLGHGTDVGH 171

Query: 364 TLPEPLSSLKSHLAVQ-VCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPR 422
            +P  +S     L +  V      T ++   G ++ FG   FG LG    G    +  PR
Sbjct: 172 WIPRRISGPLEGLQIAYVSCGTWHTALITSMGQLFTFGDGSFGVLGH---GNVKSISCPR 228

Query: 423 ILDSLRAHHVSQISTGLYHT-----VVVTDR------GRLFGFGDNERAQLGHDTLRGCL 471
            ++SL       ++ G++HT     V+VT        G+LF +GD ++ +LGH      L
Sbjct: 229 EVESLSGLKTIAVACGVWHTAAIVEVIVTQSSATVSAGKLFTWGDGDKHRLGHGDKEARL 288

Query: 472 EPT 474
           +PT
Sbjct: 289 KPT 291



 Score = 85.1 bits (209), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 90/348 (25%), Positives = 149/348 (42%), Gaps = 39/348 (11%)

Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHVVQVSASE 172
           R+ +L+  N  VF+ G    G LGHG       P   + ++ + I+F        V+  E
Sbjct: 87  RHASLVTRNGEVFTWGEDSGGRLGHGTREDSVHPRLVESLAASNIDF--------VACGE 138

Query: 173 NHAAFVLQSGQVFTCGDNSSFC--CGH-RDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
            H   V  +G+++T GD +      GH  D    I R R+   L+G+    V+ G   T 
Sbjct: 139 FHTCAVTTTGELYTWGDGTHNVGLLGHGTDVGHWIPR-RISGPLEGLQIAYVSCGTWHTA 197

Query: 230 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV----- 284
            +T  G + T G  + G LGHG+      P+ +  L  + ++  +A G  +  A+     
Sbjct: 198 LITSMGQLFTFGDGSFGVLGHGNVKSISCPREVESLSGLKTIA-VACGVWHTAAIVEVIV 256

Query: 285 ------TGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
                    G ++++G G    LGHG++   L+P  + +      +  RV+ G    V L
Sbjct: 257 TQSSATVSAGKLFTWGDGDKHRLGHGDKEARLKPTCVASLIDYDFY--RVACGHSLTVGL 314

Query: 339 DSSGYVYTWGKGYCGALGHGDEIDKT-LPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVY 397
            +SG V+T G    G LG+ +   +  L E    + S   +Q+        VL     V+
Sbjct: 315 TTSGKVWTMGNSVYGQLGNPNSDGRPCLVE--DKIASEHVLQIACGSYHVAVLTSRSEVF 372

Query: 398 GFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVV 445
            +G    G LG  D  V D+ + P  +++LR   V  I+ G   T  +
Sbjct: 373 TWGKGANGRLGHGD--VEDRKV-PTTVEALRDRAVRHIACGANFTAAI 417



 Score = 83.2 bits (204), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 80/285 (28%), Positives = 132/285 (46%), Gaps = 20/285 (7%)

Query: 207 PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 266
           P+ +E+   +    V  G+     +T  G V T G ++ G+LGHG   D   P+ +  L 
Sbjct: 68  PKPLESNLVLDVYHVDCGVRHASLVTRNGEVFTWGEDSGGRLGHGTREDSVHPRLVESL- 126

Query: 267 EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC--LGHGEQHDELQPRAIQTFRRKGIH 324
              ++  +A G  +  AVT  G +Y++G G++    LGHG       PR I +   +G+ 
Sbjct: 127 AASNIDFVACGEFHTCAVTTTGELYTWGDGTHNVGLLGHGTDVGHWIPRRI-SGPLEGLQ 185

Query: 325 VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP---EPLSSLKS------- 374
           +  VS G  H   + S G ++T+G G  G LGHG+    + P   E LS LK+       
Sbjct: 186 IAYVSCGTWHTALITSMGQLFTFGDGSFGVLGHGNVKSISCPREVESLSGLKTIAVACGV 245

Query: 375 -HLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVS 433
            H A  V     ++   V  G ++ +G      LG  D+   +  L+P  + SL  +   
Sbjct: 246 WHTAAIVEVIVTQSSATVSAGKLFTWGDGDKHRLGHGDK---EARLKPTCVASLIDYDFY 302

Query: 434 QISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG--CLEPTEI 476
           +++ G   TV +T  G+++  G++   QLG+    G  CL   +I
Sbjct: 303 RVACGHSLTVGLTTSGKVWTMGNSVYGQLGNPNSDGRPCLVEDKI 347



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 63/221 (28%), Positives = 104/221 (47%), Gaps = 18/221 (8%)

Query: 116 ITTGRYHTLLISN-SSVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSASEN 173
           ++ G +HT LI++   +F+ G    GVLGHG    + +S  R +   S    + V+    
Sbjct: 189 VSCGTWHTALITSMGQLFTFGDGSFGVLGHG--NVKSISCPREVESLSGLKTIAVACGVW 246

Query: 174 HAAFVLQ-----------SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 222
           H A +++           +G++FT GD      GH D      +P  V +L      +V 
Sbjct: 247 HTAAIVEVIVTQSSATVSAGKLFTWGDGDKHRLGHGD-KEARLKPTCVASLIDYDFYRVA 305

Query: 223 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 282
            G + T  LT  G V T G++ +GQLG+ ++  RP         E   V+QIA G  ++ 
Sbjct: 306 CGHSLTVGLTTSGKVWTMGNSVYGQLGNPNSDGRPCLVEDKIASE--HVLQIACGSYHVA 363

Query: 283 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGI 323
            +T    V+++G G+N  LGHG+  D   P  ++  R + +
Sbjct: 364 VLTSRSEVFTWGKGANGRLGHGDVEDRKVPTTVEALRDRAV 404



 Score = 53.1 bits (126), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 46/149 (30%), Positives = 66/149 (44%), Gaps = 14/149 (9%)

Query: 339 DSSGYVYTWGKGYC--GALGHGDEI-------DKTLPEPLSSLKSHLAVQVCARKRKTFV 389
           DS G VY WG+  C   A    D +       D  LP+PL S        V    R   +
Sbjct: 32  DSLGDVYVWGEVVCDNSARTSSDTVIRSTGKTDFLLPKPLESNLVLDVYHVDCGVRHASL 91

Query: 390 LVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRG 449
           +   G V+ +G    G LG    G  +  + PR+++SL A ++  ++ G +HT  VT  G
Sbjct: 92  VTRNGEVFTWGEDSGGRLGH---GTREDSVHPRLVESLAASNIDFVACGEFHTCAVTTTG 148

Query: 450 RLFGFGD--NERAQLGHDTLRGCLEPTEI 476
            L+ +GD  +    LGH T  G   P  I
Sbjct: 149 ELYTWGDGTHNVGLLGHGTDVGHWIPRRI 177


>gi|390472682|ref|XP_003734522.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 [Callithrix
           jacchus]
          Length = 1049

 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 90/276 (32%), Positives = 142/276 (51%), Gaps = 10/276 (3%)

Query: 204 IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 263
           +  PR  +       + V  GL  T F+   G V+TCG N  GQLGH  +  R  P+ + 
Sbjct: 22  VLEPRKSDFFINKKVQDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKS--RKKPEQVV 79

Query: 264 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH-GEQHDELQPRAIQTFRRKG 322
            L+   ++V ++ G ++ LA+   G VY++G  S+  LG  G +     PR I++     
Sbjct: 80  ALD-AQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSL--SD 136

Query: 323 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK-TLPEPLSSLKSHLAVQVC 381
           I +V+V+ G  H +AL  +  V+ WG+   G LG G +  K T P+ + SL     +QV 
Sbjct: 137 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQVA 196

Query: 382 ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYH 441
           A    +FVL  +G+++G+G   FG LG  D   +D+ + P +L SLR+  +  I  G  H
Sbjct: 197 AGGAHSFVLTLSGAIFGWGRNKFGQLGLNDE--NDRYV-PNLLKSLRSQKIVYICCGEDH 253

Query: 442 TVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF 477
           T  +T  G +F FG     QLGH++    + P ++F
Sbjct: 254 TAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVF 289



 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 105/333 (31%), Positives = 153/333 (45%), Gaps = 13/333 (3%)

Query: 135 GSSLCGVLGHGPETTQCVSFTRI-NFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSF 193
           G++  G LG G    + V   R  +F     V  V     H  FVL  G V+TCG N   
Sbjct: 5   GNASFGQLGLGGIDEEIVLEPRKSDFFINKKVQDVGCGLRHTVFVLDDGTVYTCGCNDLG 64

Query: 194 CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGH-GD 252
             GH  + +   +P  V AL       V+ G   T  L  +G V+  G ++ GQLG  G 
Sbjct: 65  QLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGS 121

Query: 253 TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ-HDELQ 311
                 P++I  L ++  +VQ+A G  + LA++    V+ +G      LG G     +  
Sbjct: 122 EECIRVPRNIKSLSDI-QIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTS 180

Query: 312 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSS 371
           P+ I++    GI  ++V+AG  H   L  SG ++ WG+   G LG  DE D+ +P  L S
Sbjct: 181 PQLIKSLL--GIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKS 238

Query: 372 LKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHH 431
           L+S   V +C  +  T  L   G V+ FG  G+G LG      +   + PR +  L    
Sbjct: 239 LRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG---HNSTSHEINPRKVFELMGSI 295

Query: 432 VSQISTGLYHT-VVVTDRGRLFGFGDNERAQLG 463
           V+QI+ G  HT   V   GR++ FG     QLG
Sbjct: 296 VTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 80/291 (27%), Positives = 138/291 (47%), Gaps = 8/291 (2%)

Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 179
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V VS  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVSCGEAHTLALN 100

Query: 180 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 239
             GQV+  G +S    G   +   I  PR +++L  +   QV  G   +  L+    V  
Sbjct: 101 DKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFC 160

Query: 240 CGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
            G N +GQLG G D   + +P+ I  L  +   +Q+AAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKYGQLGLGTDCKKQTSPQLIKSLLGI-PFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 299 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 358
             LG  +++D   P  +++ R + I  V +  G++H  AL   G V+T+G G  G LGH 
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRSQKI--VYICCGEDHTAALTKEGGVFTFGAGGYGQLGHN 277

Query: 359 DEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLG 408
               +  P  +  L   +  Q+ C R+  +  +  +G +Y FG  G G LG
Sbjct: 278 STSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  102 bits (253), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 84/274 (30%), Positives = 132/274 (48%), Gaps = 10/274 (3%)

Query: 98  QSVEHSSDIVETSAGNM-QITTGRYHTLLISNS-SVFSCGSSLCGVLGH-GPETTQCVSF 154
           +S +    +V   A N+  ++ G  HTL +++   V++ G    G LG  G E  +C+  
Sbjct: 70  KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSE--ECIRV 127

Query: 155 TR-INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEAL 213
            R I   S   +VQV+    H+  + ++ +VF  G N     G     +    P+L+++L
Sbjct: 128 PRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLIKSL 187

Query: 214 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
            G+P  QV AG   +  LT+ G +   G N  GQLG  D  DR  P  +  L     +V 
Sbjct: 188 LGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRS-QKIVY 246

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           I  G  +  A+T  G V++FG+G    LGH     E+ PR +  F   G  V +++ G +
Sbjct: 247 ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQ 304

Query: 334 HVVA-LDSSGYVYTWGKGYCGALGHGDEIDKTLP 366
           H  A + SSG +Y++G G  G LG G   ++  P
Sbjct: 305 HTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338



 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 77/251 (30%), Positives = 119/251 (47%), Gaps = 17/251 (6%)

Query: 70  IYA-GMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLISN 128
           +YA G+  + Q+ LL       +  +R  ++++  SDI       +Q+  G YH+L +S 
Sbjct: 105 VYAWGLDSDGQLGLLGS-----EECIRVPRNIKSLSDI-----QIVQVACGYYHSLALSK 154

Query: 129 SS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTC 187
           +S VF  G +  G LG G +  +  S   I        +QV+A   H+  +  SG +F  
Sbjct: 155 ASEVFCWGQNKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGW 214

Query: 188 GDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQ 247
           G N     G  D N   + P L+++L+      +  G + T  LT  G V T G+  +GQ
Sbjct: 215 GRNKFGQLGLNDENDR-YVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQ 273

Query: 248 LGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVVYSFGSGSNFCLGHGE 305
           LGH  T     P+ +   E +GS+V QIA G  +  A V  +G +YSFG G N  LG G 
Sbjct: 274 LGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGS 331

Query: 306 QHDELQPRAIQ 316
             +   P  ++
Sbjct: 332 TSNRKSPFTVK 342


>gi|109484871|ref|XP_001075834.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Rattus
            norvegicus]
          Length = 4859

 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 102/339 (30%), Positives = 167/339 (49%), Gaps = 17/339 (5%)

Query: 115  QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQV---SA 170
            Q+  G+  T +I +N +V +CG    G LG G      V  T I+      V Q+     
Sbjct: 4029 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHV-LTVISALQGFVVTQLVTSCG 4087

Query: 171  SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
            S+ H+  + +SG+VF+ GD      GH +++R   RPR +EAL+G    Q++ G   +  
Sbjct: 4088 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQMSCGFKHSAV 4146

Query: 231  LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSVVQIAAGPSYMLAVTGNG 288
            +T  G + T G+  +G+LG G+T ++  P+ +  LE  ++G   Q+A G ++ LAV+ +G
Sbjct: 4147 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIG---QVACGLNHTLAVSADG 4203

Query: 289  -VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 347
             +V++FG G    LG G    +  P+ +      GI + +V+ G +  VAL   G+VYT+
Sbjct: 4204 SMVWAFGDGDYGKLGLGNSTAKSSPQKVDVL--CGIGIKKVACGTQFSVALTKDGHVYTF 4261

Query: 348  GKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSL 407
            G+     L  G   +   P+ +  L   +   V      T  L  TG VY +G    G L
Sbjct: 4262 GQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQL 4321

Query: 408  GFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT 446
            G    G ++ V  P ++  L+  ++ QIS G  H+   T
Sbjct: 4322 GL---GHTNHVREPTLVTVLQGKNIRQISAGRCHSAAWT 4357



 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 106/379 (27%), Positives = 165/379 (43%), Gaps = 29/379 (7%)

Query: 96  FLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFT 155
           F +    +SD   T A    I TG    ++     V+  GS+    L  G   TQ     
Sbjct: 340 FEEVCRMASDYSRTCASPDSIQTGDA-PIVSETCEVYVWGSNSSHQLVEG---TQEKILQ 395

Query: 156 RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTN------RPIFRPRL 209
               PS +    + A +     +   G V  CG  S    G  D+N      +  F P  
Sbjct: 396 PKLAPSFSDAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPH- 454

Query: 210 VEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG 269
             ++K V   + + G   T   T  G V + G   +G+LGHG++  +  PK I    +  
Sbjct: 455 -RSIKKVSSSKGSDG--HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGK 511

Query: 270 SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS 329
            VV ++AG  +  AVT +G +Y++G G    LGHG+ +     R I T  +   +V  VS
Sbjct: 512 VVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNS----RNIPTLVKDISNVGEVS 567

Query: 330 AGDEHVVALDSSGY-VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTF 388
            G  H +AL   G  V+++G G  G LGHGD      P+ + +L+     +VCA  + + 
Sbjct: 568 CGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSL 627

Query: 389 VLVDTGSVYGFG---WMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVV 445
            L  TG VY +G    +G GS            LRP++++ L A  +  IS G  H + +
Sbjct: 628 ALTSTGQVYAWGCGACLGCGS-------SEATALRPKLIEELAATRIVDISIGDSHCLSL 680

Query: 446 TDRGRLFGFGDNERAQLGH 464
           +    ++ +G+N   Q G 
Sbjct: 681 SHDNEVYAWGNNSMGQCGQ 699



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 87/324 (26%), Positives = 150/324 (46%), Gaps = 13/324 (4%)

Query: 160  PSAAHVVQVSASENHAAFVLQS-GQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPC 218
            PS +   QV   +N   FV+Q+ G V  CG+ S    G  +++  +    ++ AL+G   
Sbjct: 4022 PSFSQAQQVICGQN-CTFVIQANGTVLACGEGSYGRLGQGNSDD-LHVLTVISALQGFVV 4079

Query: 219  KQVTAGLNFTGF---LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA 275
             Q+       G    LT  G V + G   +G+LGHG++  +  P+ I  L+    VVQ++
Sbjct: 4080 TQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQG-EEVVQMS 4138

Query: 276  AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHV 335
             G  +   VT +G +++FG+G    LG G   ++  P  +     +G  + +V+ G  H 
Sbjct: 4139 CGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTAL--EGYQIGQVACGLNHT 4196

Query: 336  VALDSSG-YVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 394
            +A+ + G  V+ +G G  G LG G+   K+ P+ +  L      +V    + +  L   G
Sbjct: 4197 LAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDG 4256

Query: 395  SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 454
             VY FG      +G P+ G +    RP+ +  L    +  ++ G  HT+ +   G ++ +
Sbjct: 4257 HVYTFGQDRL--IGLPE-GRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAW 4313

Query: 455  GDNERAQLGHDTLRGCLEPTEIFI 478
            G N   QLG        EPT + +
Sbjct: 4314 GSNSEGQLGLGHTNHVREPTLVTV 4337



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 89/266 (33%), Positives = 128/266 (48%), Gaps = 14/266 (5%)

Query: 122 HTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
           HTL   +   VFS G    G LGHG  +TQ              VV VSA   H+A V +
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528

Query: 181 SGQVFTCGDNSSFCCGHRDTN-RPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH-VH 238
            G+++T G+      GH D+N R I  P LV+ +  V   +V+ G + T  L+  G  V 
Sbjct: 529 DGELYTWGEGDFGRLGHGDSNSRNI--PTLVKDISNV--GEVSCGSSHTIALSKDGRTVW 584

Query: 239 TCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
           + G   +G+LGHGDT     PK I  L+ +  + ++ AG    LA+T  G VY++G G+ 
Sbjct: 585 SFGGGDNGKLGHGDTNRVYKPKVIEALQGM-FIRKVCAGSQSSLALTSTGQVYAWGCGA- 642

Query: 299 FCLGHG-EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 357
            CLG G  +   L+P+ I+        +V +S GD H ++L     VY WG    G  G 
Sbjct: 643 -CLGCGSSEATALRPKLIEEL--AATRIVDISIGDSHCLSLSHDNEVYAWGNNSMGQCGQ 699

Query: 358 GDEIDK-TLPEPLSSLKSHLAVQVCA 382
           G+     T P+ +S L      Q+ A
Sbjct: 700 GNSTGPITKPKKVSGLDGIAIQQISA 725



 Score = 84.7 bits (208), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 68/230 (29%), Positives = 108/230 (46%), Gaps = 11/230 (4%)

Query: 237  VHTCGSNTHGQLGH-GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 295
            V+  G+  HGQL   G  +  P   + AP        Q+  G +    +  NG V + G 
Sbjct: 3997 VYLWGAGRHGQLAEAGRNVMVP---ATAP--SFSQAQQVICGQNCTFVIQANGTVLACGE 4051

Query: 296  GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG-DEHVVALDSSGYVYTWGKGYCGA 354
            GS   LG G   D      I   +   +  +  S G D H +AL  SG V++WG G  G 
Sbjct: 4052 GSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGK 4111

Query: 355  LGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGV 414
            LGHG+   +  P  + +L+    VQ+    + + V+   G ++ FG   +G LG  +   
Sbjct: 4112 LGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN--T 4169

Query: 415  SDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRL-FGFGDNERAQLG 463
            S+K L P  + +L  + + Q++ GL HT+ V+  G + + FGD +  +LG
Sbjct: 4170 SNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLG 4218



 Score = 48.9 bits (115), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 41/143 (28%), Positives = 67/143 (46%), Gaps = 9/143 (6%)

Query: 344  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 403
            VY WG G  G L    E  + +  P ++     A QV   +  TFV+   G+V   G   
Sbjct: 3997 VYLWGAGRHGQLA---EAGRNVMVPATAPSFSQAQQVICGQNCTFVIQANGTVLACGEGS 4053

Query: 404  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLY---HTVVVTDRGRLFGFGDNERA 460
            +G LG   +G SD +    ++ +L+   V+Q+ T      H++ +T+ G +F +GD +  
Sbjct: 4054 YGRLG---QGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYG 4110

Query: 461  QLGHDTLRGCLEPTEIFIQEMEE 483
            +LGH        P +I   + EE
Sbjct: 4111 KLGHGNSDRQRRPRQIEALQGEE 4133



 Score = 48.5 bits (114), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 28/100 (28%), Positives = 48/100 (48%), Gaps = 2/100 (2%)

Query: 125 LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQV 184
           L S   V++ G   C  LG G      +    I   +A  +V +S  ++H   +    +V
Sbjct: 629 LTSTGQVYAWGCGAC--LGCGSSEATALRPKLIEELAATRIVDISIGDSHCLSLSHDNEV 686

Query: 185 FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           +  G+NS   CG  ++  PI +P+ V  L G+  +Q++AG
Sbjct: 687 YAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAG 726


>gi|218781264|ref|YP_002432582.1| chromosome condensation regulator RCC1 [Desulfatibacillum
            alkenivorans AK-01]
 gi|218762648|gb|ACL05114.1| regulator of chromosome condensation RCC1 [Desulfatibacillum
            alkenivorans AK-01]
          Length = 1525

 Score =  127 bits (320), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 89/307 (28%), Positives = 156/307 (50%), Gaps = 18/307 (5%)

Query: 159  FPSAAHVVQVSASENHAAFVLQSGQVFTCGDNS--SFCCGHRDTNRPIFRPRLVEALKGV 216
             P AA   +++A +NHA  +   G V++ G NS      G   T     RP+ + A+  V
Sbjct: 1032 LPPAA---KIAAGDNHALALAPDGSVWSWGYNSDGQLGLGSSGTYSTKNRPQKINAISNV 1088

Query: 217  PCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA 276
                +  G + +  +   G + + G N +GQLG GD   + TP+ +     + +V  IAA
Sbjct: 1089 AA--IACGGSHSLAVARDGSLWSWGYNYYGQLGLGDNYSKTTPQKV---NAISNVAAIAA 1143

Query: 277  GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVV 336
            G  Y LA+T +G V+S+G  S+  LG G+  D   P+ ++       +V  ++AG++H +
Sbjct: 1144 GEYYSLALTRDGSVWSWGDNSDGQLGLGDNEDRNTPQKVEVLS----NVAAIAAGEDHSL 1199

Query: 337  ALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSV 396
            AL   G V++WG+   G LG  D  D+  P+P++++ +  A+   A    +F + + G  
Sbjct: 1200 ALTRDGSVWSWGRNSRGQLGLDDNDDRNTPQPVTTISNIKAI--AAGNSHSFAISEEGLA 1257

Query: 397  YGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGD 456
            + +G+   G LG    G       P+ +  +   +V  +S G YH++ +T+ G L+ +GD
Sbjct: 1258 WAWGYNYDGQLGIGTSGSLANENTPQKVKVIS--NVVGLSGGNYHSLALTEDGALWAWGD 1315

Query: 457  NERAQLG 463
            N+  Q+G
Sbjct: 1316 NDDGQIG 1322



 Score =  110 bits (276), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 88/332 (26%), Positives = 158/332 (47%), Gaps = 26/332 (7%)

Query: 154 FTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNS------SFCCGHRDTNRPIFRP 207
           FT  N  +      ++A   HA  +   G V++ G NS           +   NRP    
Sbjct: 535 FTPTNVDALPLAASIAAGGGHALALASDGSVWSWGRNSVGQLGLGTGGTYSTENRP---- 590

Query: 208 RLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEE 267
           + + A+  V    +  G + +  L   G   + G N +GQLG GD + + TP+ +  L  
Sbjct: 591 QKINAISNVAA--IACGGSHSLALARDGSFWSWGYNYYGQLGLGDNVSKTTPRKVNALS- 647

Query: 268 VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVR 327
             +VV +AAG  + LA+T +G ++S+G  +   LG G+      PR +        +VV 
Sbjct: 648 --NVVAMAAGDRHSLALTLDGSLWSWGDNTYGQLGLGDNDHRNTPRKVNAIS----NVVA 701

Query: 328 VSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKT 387
           ++AG  H +AL   G V++WG    G LG GD  D+  P+P++++ +  A+ V      +
Sbjct: 702 IAAGYRHSLALTRDGSVWSWGNNTRGQLGLGDNDDRNTPQPVTTISNIKAIAV--GNNYS 759

Query: 388 FVLVDTGSVYGFGWMGFGSLGFPDRG-VSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT 446
             + + G V+ +G+   G LG    G ++D+    ++   +   +V  +S G  H++ +T
Sbjct: 760 IAISEEGLVWAWGYNCSGQLGIGTHGSLADENTPQKV---IVISNVVGLSAGSSHSIALT 816

Query: 447 DRGRLFGFGDNERAQL-GHDTLRGCLEPTEIF 477
           + G L+ +G+NE  Q+   + +     P ++F
Sbjct: 817 EDGALWAWGNNEAGQIAAEEAIEYIDNPVQVF 848



 Score = 92.8 bits (229), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 78/257 (30%), Positives = 120/257 (46%), Gaps = 16/257 (6%)

Query: 221 VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 280
           V AG  F+  L   G +   G N +GQLG GD  +R TP     L +V +   IA G  +
Sbjct: 122 VAAGRLFSLALASDGSLWAWGGNYYGQLGMGDNDNRLTPSKTPGLSDVAA---IAGGDYH 178

Query: 281 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 340
            LA T +G V++ G   +  LG    H +  P  +        +V  V+AG+   +AL +
Sbjct: 179 ALAATQSGEVWAMGRNDHGQLGFTGDHAD-APVQVAGLS----NVKSVAAGEFFSLALKN 233

Query: 341 SGYVYTWGKGYCGALGHGDEIDKT-LPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGF 399
            G V+ WG      LG G   +    P P++ L +  A+   A +R    L + GSV+ +
Sbjct: 234 DGTVWAWGNNESAQLGTGIAGEAVATPAPIAVLSNITAI--AAGRRHAMALAEDGSVWAW 291

Query: 400 GWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNER 459
           G  G G LGF D         P  + SL    V+ I++G +H++ +T  G L+ +G+N  
Sbjct: 292 GANGSGQLGFGDFETPKA---PGRVSSLA--DVTAIASGWFHSLALTSDGVLWAWGNNGD 346

Query: 460 AQLGHDTLRGCLEPTEI 476
            +LG D       P ++
Sbjct: 347 GRLGTDATSDQSLPAQV 363



 Score = 89.0 bits (219), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 78/256 (30%), Positives = 120/256 (46%), Gaps = 23/256 (8%)

Query: 215 GVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHG----QLGHGDTLDRPTPKSIAPLEEVGS 270
           G P   V AG  F+  L   G V + G+N  G     LG  D +  PT     PL     
Sbjct: 491 GNPNPMVAAGGGFSLALKTDGSVWSWGNNGSGQLGLGLGENDDVFTPTNVDALPL----- 545

Query: 271 VVQIAAGPSYMLAVTGNGVVYSFGSGS---NFCLGHGEQHDELQPRAIQTFRRKGIHVVR 327
              IAAG  + LA+  +G V+S+G  S         G    E +P+ I        +V  
Sbjct: 546 AASIAAGGGHALALASDGSVWSWGRNSVGQLGLGTGGTYSTENRPQKINAIS----NVAA 601

Query: 328 VSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKT 387
           ++ G  H +AL   G  ++WG  Y G LG GD + KT P  +++L +   V + A  R +
Sbjct: 602 IACGGSHSLALARDGSFWSWGYNYYGQLGLGDNVSKTTPRKVNALSN--VVAMAAGDRHS 659

Query: 388 FVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTD 447
             L   GS++ +G   +G LG  D   +D    PR ++++   +V  I+ G  H++ +T 
Sbjct: 660 LALTLDGSLWSWGDNTYGQLGLGD---NDHRNTPRKVNAIS--NVVAIAAGYRHSLALTR 714

Query: 448 RGRLFGFGDNERAQLG 463
            G ++ +G+N R QLG
Sbjct: 715 DGSVWSWGNNTRGQLG 730



 Score = 85.1 bits (209), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 75/256 (29%), Positives = 124/256 (48%), Gaps = 19/256 (7%)

Query: 215  GVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHG--QLGHGDTLDRPTPKSIAPLEEVGSVV 272
            G P   V AG NF+  L   G + + G N  G   LG G +++  TP  +  L       
Sbjct: 980  GNPNPMVAAGGNFSLALKTDGSLWSWGDNGTGQLGLGLGQSVNVFTPTKVDALPPAA--- 1036

Query: 273  QIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ---HDELQPRAIQTFRRKGIHVVRVS 329
            +IAAG ++ LA+  +G V+S+G  S+  LG G       + +P+ I        +V  ++
Sbjct: 1037 KIAAGDNHALALAPDGSVWSWGYNSDGQLGLGSSGTYSTKNRPQKINAIS----NVAAIA 1092

Query: 330  AGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFV 389
             G  H +A+   G +++WG  Y G LG GD   KT P+ ++++ +  A  + A +  +  
Sbjct: 1093 CGGSHSLAVARDGSLWSWGYNYYGQLGLGDNYSKTTPQKVNAISNVAA--IAAGEYYSLA 1150

Query: 390  LVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRG 449
            L   GSV+ +G    G LG  D    +   +  +L      +V+ I+ G  H++ +T  G
Sbjct: 1151 LTRDGSVWSWGDNSDGQLGLGDNEDRNTPQKVEVLS-----NVAAIAAGEDHSLALTRDG 1205

Query: 450  RLFGFGDNERAQLGHD 465
             ++ +G N R QLG D
Sbjct: 1206 SVWSWGRNSRGQLGLD 1221



 Score = 79.0 bits (193), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 86/311 (27%), Positives = 135/311 (43%), Gaps = 23/311 (7%)

Query: 160 PSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCK 219
           P  +++V V+A    +  +   G ++  G N     G  D +  +  P     L  V   
Sbjct: 114 PVVSNIVSVAAGRLFSLALASDGSLWAWGGNYYGQLGMGDNDNRL-TPSKTPGLSDV--- 169

Query: 220 QVTAGLNFTGFL-TIRGHVHTCGSNTHGQLGH-GDTLDRPTPKSIAPLEEVGSVVQIAAG 277
              AG ++     T  G V   G N HGQLG  GD  D P    +A L  V SV   AAG
Sbjct: 170 AAIAGGDYHALAATQSGEVWAMGRNDHGQLGFTGDHADAPV--QVAGLSNVKSV---AAG 224

Query: 278 PSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDEL-QPRAIQTFRRKGIHVVRVSAGDEHVV 336
             + LA+  +G V+++G+  +  LG G   + +  P  I        ++  ++AG  H +
Sbjct: 225 EFFSLALKNDGTVWAWGNNESAQLGTGIAGEAVATPAPIAVLS----NITAIAAGRRHAM 280

Query: 337 ALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSV 396
           AL   G V+ WG    G LG GD      P  +SSL    A  + +    +  L   G +
Sbjct: 281 ALAEDGSVWAWGANGSGQLGFGDFETPKAPGRVSSLADVTA--IASGWFHSLALTSDGVL 338

Query: 397 YGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGD 456
           + +G  G G LG      SD+ L P  + S+   +    + G  H++ +   G ++ +G 
Sbjct: 339 WAWGNNGDGRLG--TDATSDQSL-PAQVSSIS--NAVSFAGGQRHSLAIAADGSVWSWGG 393

Query: 457 NERAQLGHDTL 467
           N   QLG ++L
Sbjct: 394 NAYGQLGVESL 404



 Score = 66.6 bits (161), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 51/190 (26%), Positives = 84/190 (44%), Gaps = 12/190 (6%)

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           +A+   + LA+ G+G V+ +G      LG G+  + L P           ++V V+AG  
Sbjct: 72  VASRLDHSLALKGDGTVWVWGRNDYNQLGLGDDINRLAPEQAPVVS----NIVSVAAGRL 127

Query: 334 HVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDT 393
             +AL S G ++ WG  Y G LG GD  ++  P     L    A  +            +
Sbjct: 128 FSLALASDGSLWAWGGNYYGQLGMGDNDNRLTPSKTPGLSDVAA--IAGGDYHALAATQS 185

Query: 394 GSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFG 453
           G V+  G    G LGF      D    P  +  L   +V  ++ G + ++ + + G ++ 
Sbjct: 186 GEVWAMGRNDHGQLGF----TGDHADAPVQVAGLS--NVKSVAAGEFFSLALKNDGTVWA 239

Query: 454 FGDNERAQLG 463
           +G+NE AQLG
Sbjct: 240 WGNNESAQLG 249



 Score = 38.5 bits (88), Expect = 6.9,   Method: Composition-based stats.
 Identities = 88/384 (22%), Positives = 145/384 (37%), Gaps = 61/384 (15%)

Query: 116 ITTGRYHTL-LISNSSVFSCGSSLCGVLGHG----PETTQCVSFTRINFPSAAHVVQVSA 170
           I  GR H + L  + SV++ G++  G LG G    P+    VS       S A V  +++
Sbjct: 272 IAAGRRHAMALAEDGSVWAWGANGSGQLGFGDFETPKAPGRVS-------SLADVTAIAS 324

Query: 171 SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
              H+  +   G ++  G+N     G   T+      ++      V       G   +  
Sbjct: 325 GWFHSLALTSDGVLWAWGNNGDGRLGTDATSDQSLPAQVSSISNAV---SFAGGQRHSLA 381

Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML-------- 282
           +   G V + G N +GQLG          +S+ P   +  V  + +G  + L        
Sbjct: 382 IAADGSVWSWGGNAYGQLG---------VESLTPASVLTPVHTLYSGEDFHLFYDTDGDG 432

Query: 283 ----------------------AVTGNGVVYSFGSGS-NFCLGHGEQHDELQPRAIQTFR 319
                                  V+  G     G G+ +FC G      ++QP     F 
Sbjct: 433 AANIWDDDDDGDGFLDESDNCPCVSNPGQEDEDGDGTGDFCDGCPGDFFKIQP----GFS 488

Query: 320 RKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQ 379
             G     V+AG    +AL + G V++WG    G LG G   +  +  P +     LA  
Sbjct: 489 GCGNPNPMVAAGGGFSLALKTDGSVWSWGNNGSGQLGLGLGENDDVFTPTNVDALPLAAS 548

Query: 380 VCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGL 439
           + A       L   GSV+ +G    G LG    G      RP+ ++++   +V+ I+ G 
Sbjct: 549 IAAGGGHALALASDGSVWSWGRNSVGQLGLGTGGTYSTENRPQKINAIS--NVAAIACGG 606

Query: 440 YHTVVVTDRGRLFGFGDNERAQLG 463
            H++ +   G  + +G N   QLG
Sbjct: 607 SHSLALARDGSFWSWGYNYYGQLG 630


>gi|149042013|gb|EDL95854.1| rCG58270 [Rattus norvegicus]
          Length = 3507

 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 102/339 (30%), Positives = 167/339 (49%), Gaps = 17/339 (5%)

Query: 115  QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQV---SA 170
            Q+  G+  T +I +N +V +CG    G LG G      V  T I+      V Q+     
Sbjct: 2677 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHV-LTVISALQGFVVTQLVTSCG 2735

Query: 171  SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
            S+ H+  + +SG+VF+ GD      GH +++R   RPR +EAL+G    Q++ G   +  
Sbjct: 2736 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQMSCGFKHSAV 2794

Query: 231  LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSVVQIAAGPSYMLAVTGNG 288
            +T  G + T G+  +G+LG G+T ++  P+ +  LE  ++G   Q+A G ++ LAV+ +G
Sbjct: 2795 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIG---QVACGLNHTLAVSADG 2851

Query: 289  -VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 347
             +V++FG G    LG G    +  P+ +      GI + +V+ G +  VAL   G+VYT+
Sbjct: 2852 SMVWAFGDGDYGKLGLGNSTAKSSPQKVDVL--CGIGIKKVACGTQFSVALTKDGHVYTF 2909

Query: 348  GKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSL 407
            G+     L  G   +   P+ +  L   +   V      T  L  TG VY +G    G L
Sbjct: 2910 GQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQL 2969

Query: 408  GFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT 446
            G    G ++ V  P ++  L+  ++ QIS G  H+   T
Sbjct: 2970 GL---GHTNHVREPTLVTVLQGKNIRQISAGRCHSAAWT 3005



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 87/324 (26%), Positives = 150/324 (46%), Gaps = 13/324 (4%)

Query: 160  PSAAHVVQVSASENHAAFVLQS-GQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPC 218
            PS +   QV   +N   FV+Q+ G V  CG+ S    G  +++  +    ++ AL+G   
Sbjct: 2670 PSFSQAQQVICGQN-CTFVIQANGTVLACGEGSYGRLGQGNSDD-LHVLTVISALQGFVV 2727

Query: 219  KQVTAGLNFTGF---LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA 275
             Q+       G    LT  G V + G   +G+LGHG++  +  P+ I  L+    VVQ++
Sbjct: 2728 TQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQG-EEVVQMS 2786

Query: 276  AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHV 335
             G  +   VT +G +++FG+G    LG G   ++  P  +     +G  + +V+ G  H 
Sbjct: 2787 CGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTAL--EGYQIGQVACGLNHT 2844

Query: 336  VALDSSG-YVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 394
            +A+ + G  V+ +G G  G LG G+   K+ P+ +  L      +V    + +  L   G
Sbjct: 2845 LAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDG 2904

Query: 395  SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 454
             VY FG      +G P+ G +    RP+ +  L    +  ++ G  HT+ +   G ++ +
Sbjct: 2905 HVYTFGQDRL--IGLPE-GRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAW 2961

Query: 455  GDNERAQLGHDTLRGCLEPTEIFI 478
            G N   QLG        EPT + +
Sbjct: 2962 GSNSEGQLGLGHTNHVREPTLVTV 2985



 Score = 84.7 bits (208), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 68/230 (29%), Positives = 108/230 (46%), Gaps = 11/230 (4%)

Query: 237  VHTCGSNTHGQLGH-GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 295
            V+  G+  HGQL   G  +  P   + AP        Q+  G +    +  NG V + G 
Sbjct: 2645 VYLWGAGRHGQLAEAGRNVMVP---ATAP--SFSQAQQVICGQNCTFVIQANGTVLACGE 2699

Query: 296  GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG-DEHVVALDSSGYVYTWGKGYCGA 354
            GS   LG G   D      I   +   +  +  S G D H +AL  SG V++WG G  G 
Sbjct: 2700 GSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGK 2759

Query: 355  LGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGV 414
            LGHG+   +  P  + +L+    VQ+    + + V+   G ++ FG   +G LG  +   
Sbjct: 2760 LGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN--T 2817

Query: 415  SDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRL-FGFGDNERAQLG 463
            S+K L P  + +L  + + Q++ GL HT+ V+  G + + FGD +  +LG
Sbjct: 2818 SNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLG 2866



 Score = 48.9 bits (115), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 41/143 (28%), Positives = 67/143 (46%), Gaps = 9/143 (6%)

Query: 344  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 403
            VY WG G  G L    E  + +  P ++     A QV   +  TFV+   G+V   G   
Sbjct: 2645 VYLWGAGRHGQLA---EAGRNVMVPATAPSFSQAQQVICGQNCTFVIQANGTVLACGEGS 2701

Query: 404  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLY---HTVVVTDRGRLFGFGDNERA 460
            +G LG   +G SD +    ++ +L+   V+Q+ T      H++ +T+ G +F +GD +  
Sbjct: 2702 YGRLG---QGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYG 2758

Query: 461  QLGHDTLRGCLEPTEIFIQEMEE 483
            +LGH        P +I   + EE
Sbjct: 2759 KLGHGNSDRQRRPRQIEALQGEE 2781


>gi|229442455|gb|AAI72910.1| guanine nucleotide exchange factor p532 [synthetic construct]
          Length = 2441

 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 103/339 (30%), Positives = 166/339 (48%), Gaps = 17/339 (5%)

Query: 115  QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQV---SA 170
            Q+  G+  T +I +N +V +CG    G LG G      V  T I+      V Q+     
Sbjct: 1611 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHV-LTVISALQGFVVTQLVTSCG 1669

Query: 171  SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
            S+ H+  + +SG+VF+ GD      GH +++R   RPR +EAL+G    Q++ G   +  
Sbjct: 1670 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQMSCGFKHSAV 1728

Query: 231  LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSVVQIAAGPSYMLAVTGNG 288
            +T  G + T G+  +G+LG G+T ++  P+ +  LE  ++G   Q+A G ++ LAV+ +G
Sbjct: 1729 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIG---QVACGLNHTLAVSADG 1785

Query: 289  -VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 347
             +V++FG G    LG G    +  P+ I      GI + +V+ G +  VAL   G+VYT+
Sbjct: 1786 SMVWAFGDGDYGKLGLGNSTAKSSPQKIDVL--CGIGIKKVACGTQFSVALTKDGHVYTF 1843

Query: 348  GKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSL 407
            G+     L  G   +   P+ +  L   +   V      T  L   G VY +G    G L
Sbjct: 1844 GQDRLIGLPEGRARNHNRPQQIPVLAGVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQL 1903

Query: 408  GFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT 446
            G    G ++ V  P ++  L+  +V QIS G  H+   T
Sbjct: 1904 GL---GHTNHVREPTLVTGLQGKNVRQISAGRCHSAAWT 1939



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 87/320 (27%), Positives = 148/320 (46%), Gaps = 13/320 (4%)

Query: 160  PSAAHVVQVSASENHAAFVLQS-GQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPC 218
            PS +   QV   +N   FV+Q+ G V  CG+ S    G  +++  +    ++ AL+G   
Sbjct: 1604 PSFSQAQQVICGQN-CTFVIQANGTVLACGEGSYGRLGQGNSDD-LHVLTVISALQGFVV 1661

Query: 219  KQVTAGLNFTGF---LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA 275
             Q+       G    LT  G V + G   +G+LGHG++  +  P+ I  L+    VVQ++
Sbjct: 1662 TQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQG-EEVVQMS 1720

Query: 276  AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHV 335
             G  +   VT +G +++FG+G    LG G   ++  P  +     +G  + +V+ G  H 
Sbjct: 1721 CGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTAL--EGYQIGQVACGLNHT 1778

Query: 336  VALDSSG-YVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 394
            +A+ + G  V+ +G G  G LG G+   K+ P+ +  L      +V    + +  L   G
Sbjct: 1779 LAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDG 1838

Query: 395  SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 454
             VY FG      +G P+ G +    RP+ +  L    +  ++ G  HT+ +   G ++ +
Sbjct: 1839 HVYTFGQDRL--IGLPE-GRARNHNRPQQIPVLAGVIIEDVAVGAEHTLALASNGDVYAW 1895

Query: 455  GDNERAQLGHDTLRGCLEPT 474
            G N   QLG        EPT
Sbjct: 1896 GSNSEGQLGLGHTNHVREPT 1915



 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 68/230 (29%), Positives = 108/230 (46%), Gaps = 11/230 (4%)

Query: 237  VHTCGSNTHGQLGH-GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 295
            V+  G+  HGQL   G  +  P   + AP        Q+  G +    +  NG V + G 
Sbjct: 1579 VYLWGAGRHGQLAEAGRNVMVP---AAAP--SFSQAQQVICGQNCTFVIQANGTVLACGE 1633

Query: 296  GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG-DEHVVALDSSGYVYTWGKGYCGA 354
            GS   LG G   D      I   +   +  +  S G D H +AL  SG V++WG G  G 
Sbjct: 1634 GSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGK 1693

Query: 355  LGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGV 414
            LGHG+   +  P  + +L+    VQ+    + + V+   G ++ FG   +G LG  +   
Sbjct: 1694 LGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN--T 1751

Query: 415  SDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRL-FGFGDNERAQLG 463
            S+K L P  + +L  + + Q++ GL HT+ V+  G + + FGD +  +LG
Sbjct: 1752 SNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLG 1800



 Score = 49.3 bits (116), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 41/143 (28%), Positives = 67/143 (46%), Gaps = 9/143 (6%)

Query: 344  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 403
            VY WG G  G L    E  + +  P ++     A QV   +  TFV+   G+V   G   
Sbjct: 1579 VYLWGAGRHGQLA---EAGRNVMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGS 1635

Query: 404  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLY---HTVVVTDRGRLFGFGDNERA 460
            +G LG   +G SD +    ++ +L+   V+Q+ T      H++ +T+ G +F +GD +  
Sbjct: 1636 YGRLG---QGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYG 1692

Query: 461  QLGHDTLRGCLEPTEIFIQEMEE 483
            +LGH        P +I   + EE
Sbjct: 1693 KLGHGNSDRQRRPRQIEALQGEE 1715


>gi|195170687|ref|XP_002026143.1| GL16177 [Drosophila persimilis]
 gi|194111023|gb|EDW33066.1| GL16177 [Drosophila persimilis]
          Length = 1052

 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 104/341 (30%), Positives = 160/341 (46%), Gaps = 17/341 (4%)

Query: 130 SVFSCGSSLCGVLGHG-PETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCG 188
           +++  G +  G LG G  E  Q +  ++I F   + V Q++    H  F+  +GQV+ CG
Sbjct: 2   ALYCWGDASHGQLGLGGIENEQILLPSQIEFKPDSPVQQIACGHRHTLFLTANGQVYACG 61

Query: 189 DNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQL 248
           +N     GH     P  RP  +  L+     Q+  G   +  LT  G + + G N  GQ+
Sbjct: 62  NNDHHQLGHE---LPTKRPLPIPELQAYVVIQIACGSRHSMALTEWGQILSWGDNDCGQV 118

Query: 249 GHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHD 308
           GH    D      I       +VVQIA G ++ LA+T  G +YS+  GSN     G Q  
Sbjct: 119 GHSTDNDVIELPKILRFLVSRTVVQIACGNNHSLALTSCGELYSW--GSNIYGQLGVQSP 176

Query: 309 ELQPRAIQTFRRK---GIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTL 365
           +  P +    R     GI +  ++ G  H   +  S  V+ WGK  CG LG  DE ++  
Sbjct: 177 KDLPHSNAPLRLTTILGIPLATIACGGNHSFLISKSSAVFGWGKNTCGQLGLNDEQNRAY 236

Query: 366 PEPLSSLKSHLAVQ--VCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRI 423
           P  L S+++ L V+   C  +   F L + G V+  G   +G LG    GVS+  + PR+
Sbjct: 237 PSQLKSMRT-LGVRFVTCGDEYSVF-LTNEGGVFTCGAGNYGQLG---HGVSNNEMIPRM 291

Query: 424 LDSLRAHHVSQISTGLYHTV-VVTDRGRLFGFGDNERAQLG 463
           +  L    ++Q++ G  HT+ +V   GR++ FG     QLG
Sbjct: 292 VIELMGSTITQVACGNRHTLALVPSGGRVYSFGLGASGQLG 332



 Score =  117 bits (294), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 95/302 (31%), Positives = 142/302 (47%), Gaps = 17/302 (5%)

Query: 115 QITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
           QI  G  HTL L +N  V++CG++    LGH   T + +    +    A  V+Q++    
Sbjct: 40  QIACGHRHTLFLTANGQVYACGNNDHHQLGHELPTKRPLPIPEL---QAYVVIQIACGSR 96

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
           H+  + + GQ+ + GDN     GH   N  I  P+++  L      Q+  G N +  LT 
Sbjct: 97  HSMALTEWGQILSWGDNDCGQVGHSTDNDVIELPKILRFLVSRTVVQIACGNNHSLALTS 156

Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG----SVVQIAAGPSYMLAVTGNGV 289
            G +++ GSN +GQLG     D   P S APL         +  IA G ++   ++ +  
Sbjct: 157 CGELYSWGSNIYGQLGVQSPKD--LPHSNAPLRLTTILGIPLATIACGGNHSFLISKSSA 214

Query: 290 VYSFGSGSNFC--LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 347
           V  FG G N C  LG  ++ +   P  +++ R  G+    V+ GDE+ V L + G V+T 
Sbjct: 215 V--FGWGKNTCGQLGLNDEQNRAYPSQLKSMRTLGVRF--VTCGDEYSVFLTNEGGVFTC 270

Query: 348 GKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDT-GSVYGFGWMGFGS 406
           G G  G LGHG   ++ +P  +  L      QV    R T  LV + G VY FG    G 
Sbjct: 271 GAGNYGQLGHGVSNNEMIPRMVIELMGSTITQVACGNRHTLALVPSGGRVYSFGLGASGQ 330

Query: 407 LG 408
           LG
Sbjct: 331 LG 332



 Score =  109 bits (273), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 79/268 (29%), Positives = 125/268 (46%), Gaps = 12/268 (4%)

Query: 201 NRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPK 260
           N  I  P  +E     P +Q+  G   T FLT  G V+ CG+N H QLGH     RP P 
Sbjct: 21  NEQILLPSQIEFKPDSPVQQIACGHRHTLFLTANGQVYACGNNDHHQLGHELPTKRPLP- 79

Query: 261 SIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQ-PRAIQTFR 319
              P  +   V+QIA G  + +A+T  G + S+G      +GH   +D ++ P+ ++   
Sbjct: 80  --IPELQAYVVIQIACGSRHSMALTEWGQILSWGDNDCGQVGHSTDNDVIELPKILRFLV 137

Query: 320 RKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEID---KTLPEPLSSLKSHL 376
            +   VV+++ G+ H +AL S G +Y+WG    G LG     D      P  L+++    
Sbjct: 138 SRT--VVQIACGNNHSLALTSCGELYSWGSNIYGQLGVQSPKDLPHSNAPLRLTTILGIP 195

Query: 377 AVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS 436
              +      +F++  + +V+G+G    G LG  D         P  L S+R   V  ++
Sbjct: 196 LATIACGGNHSFLISKSSAVFGWGKNTCGQLGLNDE---QNRAYPSQLKSMRTLGVRFVT 252

Query: 437 TGLYHTVVVTDRGRLFGFGDNERAQLGH 464
            G  ++V +T+ G +F  G     QLGH
Sbjct: 253 CGDEYSVFLTNEGGVFTCGAGNYGQLGH 280



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 75/262 (28%), Positives = 127/262 (48%), Gaps = 15/262 (5%)

Query: 114 MQITTGRYHTLLISN-SSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +QI  G  H++ ++    + S G + CG +GH  +         + F  +  VVQ++   
Sbjct: 89  IQIACGSRHSMALTEWGQILSWGDNDCGQVGHSTDNDVIELPKILRFLVSRTVVQIACGN 148

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRD------TNRPIFRPRLVEALKGVPCKQVTAGLN 226
           NH+  +   G++++ G N     G +       +N P+   RL   L G+P   +  G N
Sbjct: 149 NHSLALTSCGELYSWGSNIYGQLGVQSPKDLPHSNAPL---RLTTIL-GIPLATIACGGN 204

Query: 227 FTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTG 286
            +  ++    V   G NT GQLG  D  +R  P  +  +  +G V  +  G  Y + +T 
Sbjct: 205 HSFLISKSSAVFGWGKNTCGQLGLNDEQNRAYPSQLKSMRTLG-VRFVTCGDEYSVFLTN 263

Query: 287 NGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL-DSSGYVY 345
            G V++ G+G+   LGHG  ++E+ PR +      G  + +V+ G+ H +AL  S G VY
Sbjct: 264 EGGVFTCGAGNYGQLGHGVSNNEMIPRMV--IELMGSTITQVACGNRHTLALVPSGGRVY 321

Query: 346 TWGKGYCGALGHGDEIDKTLPE 367
           ++G G  G LG  + I +TLP+
Sbjct: 322 SFGLGASGQLGTRNTISQTLPK 343



 Score = 84.0 bits (206), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 67/246 (27%), Positives = 111/246 (45%), Gaps = 14/246 (5%)

Query: 237 VHTCGSNTHGQLGHG----DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
           ++  G  +HGQLG G    + +  P+     P      V QIA G  + L +T NG VY+
Sbjct: 3   LYCWGDASHGQLGLGGIENEQILLPSQIEFKP---DSPVQQIACGHRHTLFLTANGQVYA 59

Query: 293 FGSGSNFCLGHGEQHDEL-QPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 351
            G+  +  LGH     EL   R +     +   V++++ G  H +AL   G + +WG   
Sbjct: 60  CGNNDHHQLGH-----ELPTKRPLPIPELQAYVVIQIACGSRHSMALTEWGQILSWGDND 114

Query: 352 CGALGHGDEIDKT-LPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFP 410
           CG +GH  + D   LP+ L  L S   VQ+      +  L   G +Y +G   +G LG  
Sbjct: 115 CGQVGHSTDNDVIELPKILRFLVSRTVVQIACGNNHSLALTSCGELYSWGSNIYGQLGVQ 174

Query: 411 DRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGC 470
                     P  L ++    ++ I+ G  H+ +++    +FG+G N   QLG +  +  
Sbjct: 175 SPKDLPHSNAPLRLTTILGIPLATIACGGNHSFLISKSSAVFGWGKNTCGQLGLNDEQNR 234

Query: 471 LEPTEI 476
             P+++
Sbjct: 235 AYPSQL 240



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 47/149 (31%), Positives = 69/149 (46%), Gaps = 4/149 (2%)

Query: 116 ITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           I  G  H+ LIS SS VF  G + CG LG   E  +    +++       V  V+  + +
Sbjct: 199 IACGGNHSFLISKSSAVFGWGKNTCGQLGLNDEQNRAYP-SQLKSMRTLGVRFVTCGDEY 257

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFT-GFLTI 233
           + F+   G VFTCG  +    GH  +N  +  PR+V  L G    QV  G   T   +  
Sbjct: 258 SVFLTNEGGVFTCGAGNYGQLGHGVSNNEMI-PRMVIELMGSTITQVACGNRHTLALVPS 316

Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPTPKSI 262
            G V++ G    GQLG  +T+ +  PK +
Sbjct: 317 GGRVYSFGLGASGQLGTRNTISQTLPKVV 345


>gi|345795045|ref|XP_544717.3| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein ligase
            HERC1 isoform 1 [Canis lupus familiaris]
          Length = 4861

 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 102/339 (30%), Positives = 167/339 (49%), Gaps = 17/339 (5%)

Query: 115  QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQV---SA 170
            Q+  G+  T +I +N +V +CG    G LG G      V  T I+      V Q+     
Sbjct: 4031 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHV-LTVISALQGFVVTQLVTSCG 4089

Query: 171  SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
            S+ H+  + +SG+VF+ GD      GH +++R   RPR +EAL+G    Q++ G   +  
Sbjct: 4090 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQMSCGFKHSAV 4148

Query: 231  LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSVVQIAAGPSYMLAVTGNG 288
            +T  G + T G+  +G+LG G+T ++  P+ +  LE  ++G   Q+A G ++ LAV+ +G
Sbjct: 4149 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIG---QVACGLNHTLAVSADG 4205

Query: 289  -VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 347
             +V++FG G    LG G    +  P+ +      GI + +V+ G +  VAL   G+VYT+
Sbjct: 4206 SMVWAFGDGDYGKLGLGNSTAKSSPQKVDVL--CGIGIKKVACGTQFSVALTKDGHVYTF 4263

Query: 348  GKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSL 407
            G+     L  G   +   P+ +  L   +   V      T  L  TG VY +G    G L
Sbjct: 4264 GQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQL 4323

Query: 408  GFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT 446
            G    G ++ V  P ++  L+  ++ QIS G  H+   T
Sbjct: 4324 GL---GHTNHVREPTLVTVLQGKNIRQISAGRCHSAAWT 4359



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 105/380 (27%), Positives = 166/380 (43%), Gaps = 31/380 (8%)

Query: 96  FLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFT 155
           F +    +SD   T A    I TG    ++     V+  GS+    L  G +        
Sbjct: 340 FEEVCRMASDYSRTCASPDSIQTGDA-PIVSETCEVYVWGSNSSHQLVEGTQEKILQPKM 398

Query: 156 RINFPSAAHVVQVSASENHAAFVLQS-GQVFTCGDNSSFCCGHRDTN------RPIFRPR 208
            ++F  A    Q   +  +  FV+ + G V  CG  S    G  D+N      +  F P 
Sbjct: 399 ALSFSDA----QTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPH 454

Query: 209 LVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEV 268
              ++K V   + + G   T   T  G V + G   +G+LGHG++  +  PK I    + 
Sbjct: 455 --RSIKKVSSSKGSDG--HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQG 510

Query: 269 GSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRV 328
             VV ++AG  +  AVT +G +Y++G G    LGHG+ +     R I T  +   +V  V
Sbjct: 511 KVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNS----RNIPTLVKDISNVGEV 566

Query: 329 SAGDEHVVALDSSGY-VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKT 387
           S G  H +AL   G  V+++G G  G LGHGD      P+ + +L+     +VCA  + +
Sbjct: 567 SCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVVEALQGMFIRKVCAGSQSS 626

Query: 388 FVLVDTGSVYGFG---WMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV 444
             L  TG VY +G    +G GS            LRP++++ L A  +  IS G    + 
Sbjct: 627 LALTSTGQVYAWGCGACLGCGS-------SEATALRPKLIEELAATRIVDISIGDSXCLA 679

Query: 445 VTDRGRLFGFGDNERAQLGH 464
           +     ++ +G+N   Q G 
Sbjct: 680 LRHDNEVYAWGNNSMGQCGQ 699



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 87/324 (26%), Positives = 150/324 (46%), Gaps = 13/324 (4%)

Query: 160  PSAAHVVQVSASENHAAFVLQS-GQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPC 218
            PS +   QV   +N   FV+Q+ G V  CG+ S    G  +++  +    ++ AL+G   
Sbjct: 4024 PSFSQAQQVICGQN-CTFVIQANGTVLACGEGSYGRLGQGNSDD-LHVLTVISALQGFVV 4081

Query: 219  KQVTAGLNFTGF---LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA 275
             Q+       G    LT  G V + G   +G+LGHG++  +  P+ I  L+    VVQ++
Sbjct: 4082 TQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQG-EEVVQMS 4140

Query: 276  AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHV 335
             G  +   VT +G +++FG+G    LG G   ++  P  +     +G  + +V+ G  H 
Sbjct: 4141 CGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTAL--EGYQIGQVACGLNHT 4198

Query: 336  VALDSSG-YVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 394
            +A+ + G  V+ +G G  G LG G+   K+ P+ +  L      +V    + +  L   G
Sbjct: 4199 LAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDG 4258

Query: 395  SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 454
             VY FG      +G P+ G +    RP+ +  L    +  ++ G  HT+ +   G ++ +
Sbjct: 4259 HVYTFGQDRL--IGLPE-GRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAW 4315

Query: 455  GDNERAQLGHDTLRGCLEPTEIFI 478
            G N   QLG        EPT + +
Sbjct: 4316 GSNSEGQLGLGHTNHVREPTLVTV 4339



 Score = 84.7 bits (208), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 68/230 (29%), Positives = 108/230 (46%), Gaps = 11/230 (4%)

Query: 237  VHTCGSNTHGQLGH-GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 295
            V+  G+  HGQL   G  +  P   + AP        Q+  G +    +  NG V + G 
Sbjct: 3999 VYLWGAGRHGQLAEAGRNVMVP---AAAP--SFSQAQQVICGQNCTFVIQANGTVLACGE 4053

Query: 296  GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG-DEHVVALDSSGYVYTWGKGYCGA 354
            GS   LG G   D      I   +   +  +  S G D H +AL  SG V++WG G  G 
Sbjct: 4054 GSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGK 4113

Query: 355  LGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGV 414
            LGHG+   +  P  + +L+    VQ+    + + V+   G ++ FG   +G LG  +   
Sbjct: 4114 LGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN--T 4171

Query: 415  SDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRL-FGFGDNERAQLG 463
            S+K L P  + +L  + + Q++ GL HT+ V+  G + + FGD +  +LG
Sbjct: 4172 SNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLG 4220



 Score = 48.9 bits (115), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 41/143 (28%), Positives = 67/143 (46%), Gaps = 9/143 (6%)

Query: 344  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 403
            VY WG G  G L    E  + +  P ++     A QV   +  TFV+   G+V   G   
Sbjct: 3999 VYLWGAGRHGQLA---EAGRNVMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGS 4055

Query: 404  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLY---HTVVVTDRGRLFGFGDNERA 460
            +G LG   +G SD +    ++ +L+   V+Q+ T      H++ +T+ G +F +GD +  
Sbjct: 4056 YGRLG---QGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYG 4112

Query: 461  QLGHDTLRGCLEPTEIFIQEMEE 483
            +LGH        P +I   + EE
Sbjct: 4113 KLGHGNSDRQRRPRQIEALQGEE 4135



 Score = 45.8 bits (107), Expect = 0.053,   Method: Compositional matrix adjust.
 Identities = 27/100 (27%), Positives = 47/100 (47%), Gaps = 2/100 (2%)

Query: 125 LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQV 184
           L S   V++ G   C  LG G      +    I   +A  +V +S  ++    +    +V
Sbjct: 629 LTSTGQVYAWGCGAC--LGCGSSEATALRPKLIEELAATRIVDISIGDSXCLALRHDNEV 686

Query: 185 FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           +  G+NS   CG  ++  PI +P+ V  L G+  +Q++AG
Sbjct: 687 YAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAG 726


>gi|297696825|ref|XP_002825580.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein ligase
            HERC1 [Pongo abelii]
          Length = 4864

 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 103/339 (30%), Positives = 166/339 (48%), Gaps = 17/339 (5%)

Query: 115  QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQV---SA 170
            Q+  G+  T +I +N +V +CG    G LG G      V  T I+      V Q+     
Sbjct: 4034 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHV-LTVISALQGFVVTQLVTSCG 4092

Query: 171  SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
            S+ H+  + +SG+VF+ GD      GH +++R   RPR +EAL+G    Q++ G   +  
Sbjct: 4093 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQMSCGFKHSAV 4151

Query: 231  LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSVVQIAAGPSYMLAVTGNG 288
            +T  G + T G+  +G+LG G+T ++  P+ +  LE  ++G   Q+A G ++ LAV+ +G
Sbjct: 4152 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIG---QVACGLNHTLAVSADG 4208

Query: 289  -VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 347
             +V++FG G    LG G    +  P+ I      GI + +V+ G +  VAL   G+VYT+
Sbjct: 4209 SMVWAFGDGDYGKLGLGNSTAKSSPQKIDVL--CGIGIKKVACGTQFSVALTKDGHVYTF 4266

Query: 348  GKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSL 407
            G+     L  G   +   P+ +  L   +   V      T  L   G VY +G    G L
Sbjct: 4267 GQDRLIGLPEGRARNHNRPQQIPLLAGVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQL 4326

Query: 408  GFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT 446
            G    G ++ V  P ++  L+  +V QIS G  H+   T
Sbjct: 4327 GL---GHTNHVREPTLVTGLQGKNVRQISAGRCHSAAWT 4362



 Score =  109 bits (273), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 90/315 (28%), Positives = 144/315 (45%), Gaps = 25/315 (7%)

Query: 160 PSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTN------RPIFRPRLVEAL 213
           PS +    + A +     +   G V  CG  S    G  D+N      +  F P    ++
Sbjct: 400 PSFSDAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPH--RSI 457

Query: 214 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
           K V   + + G   T   T  G V + G   +G+LGHG++  +  PK I    +   VV 
Sbjct: 458 KKVSSSKGSDG--HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVC 515

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           ++AG  +  AVT +G +Y++G G    LGHG+ +     R I T  +   +V  VS G  
Sbjct: 516 VSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNS----RNIPTLVKDISNVGEVSCGSS 571

Query: 334 HVVALDSSGY-VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVD 392
           H +AL   G  V+++G G  G LGHGD      P+ + +L+     +VCA  + +  L  
Sbjct: 572 HTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTS 631

Query: 393 TGSVYGFG---WMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRG 449
           TG VY +G    +G GS            LRP++++ L A  +  +S G  H + ++   
Sbjct: 632 TGQVYAWGCGACLGCGS-------SEATALRPKLIEELAATRIVDVSIGDSHCLALSHDN 684

Query: 450 RLFGFGDNERAQLGH 464
            ++ +G+N   Q G 
Sbjct: 685 EVYAWGNNSMGQCGQ 699



 Score = 98.6 bits (244), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 91/266 (34%), Positives = 128/266 (48%), Gaps = 14/266 (5%)

Query: 122 HTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
           HTL   +   VFS G    G LGHG  +TQ              VV VSA   H+A V +
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528

Query: 181 SGQVFTCGDNSSFCCGHRDTN-RPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH-VH 238
            G+++T G+      GH D+N R I  P LV+ +  V   +V+ G + T  L+  G  V 
Sbjct: 529 DGELYTWGEGDFGRLGHGDSNSRNI--PTLVKDISNV--GEVSCGSSHTIALSKDGRTVW 584

Query: 239 TCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
           + G   +G+LGHGDT     PK I  L+ +  + ++ AG    LA+T  G VY++G G+ 
Sbjct: 585 SFGGGDNGKLGHGDTNRVYKPKVIEALQGM-FIRKVCAGSQSSLALTSTGQVYAWGCGA- 642

Query: 299 FCLGHG-EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 357
            CLG G  +   L+P+ I+        +V VS GD H +AL     VY WG    G  G 
Sbjct: 643 -CLGCGSSEATALRPKLIEEL--AATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQ 699

Query: 358 GDEIDK-TLPEPLSSLKSHLAVQVCA 382
           G+     T P+ +S L      Q+ A
Sbjct: 700 GNSTGPITKPKKVSGLDGIAIQQISA 725



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 87/320 (27%), Positives = 148/320 (46%), Gaps = 13/320 (4%)

Query: 160  PSAAHVVQVSASENHAAFVLQS-GQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPC 218
            PS +   QV   +N   FV+Q+ G V  CG+ S    G  +++  +    ++ AL+G   
Sbjct: 4027 PSFSQAQQVICGQN-CTFVIQANGTVLACGEGSYGRLGQGNSDD-LHVLTVISALQGFVV 4084

Query: 219  KQVTAGLNFTGF---LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA 275
             Q+       G    LT  G V + G   +G+LGHG++  +  P+ I  L+    VVQ++
Sbjct: 4085 TQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQG-EEVVQMS 4143

Query: 276  AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHV 335
             G  +   VT +G +++FG+G    LG G   ++  P  +     +G  + +V+ G  H 
Sbjct: 4144 CGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTAL--EGYQIGQVACGLNHT 4201

Query: 336  VALDSSG-YVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 394
            +A+ + G  V+ +G G  G LG G+   K+ P+ +  L      +V    + +  L   G
Sbjct: 4202 LAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDG 4261

Query: 395  SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 454
             VY FG      +G P+ G +    RP+ +  L    +  ++ G  HT+ +   G ++ +
Sbjct: 4262 HVYTFGQDRL--IGLPE-GRARNHNRPQQIPLLAGVIIEDVAVGAEHTLALASNGDVYAW 4318

Query: 455  GDNERAQLGHDTLRGCLEPT 474
            G N   QLG        EPT
Sbjct: 4319 GSNSEGQLGLGHTNHVREPT 4338



 Score = 84.7 bits (208), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 68/230 (29%), Positives = 108/230 (46%), Gaps = 11/230 (4%)

Query: 237  VHTCGSNTHGQLGH-GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 295
            V+  G+  HGQL   G  +  P   + AP        Q+  G +    +  NG V + G 
Sbjct: 4002 VYLWGAGRHGQLAEAGRNVMVP---AAAP--SFSQAQQVICGQNCTFVIQANGTVLACGE 4056

Query: 296  GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG-DEHVVALDSSGYVYTWGKGYCGA 354
            GS   LG G   D      I   +   +  +  S G D H +AL  SG V++WG G  G 
Sbjct: 4057 GSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGK 4116

Query: 355  LGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGV 414
            LGHG+   +  P  + +L+    VQ+    + + V+   G ++ FG   +G LG  +   
Sbjct: 4117 LGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN--T 4174

Query: 415  SDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRL-FGFGDNERAQLG 463
            S+K L P  + +L  + + Q++ GL HT+ V+  G + + FGD +  +LG
Sbjct: 4175 SNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLG 4223



 Score = 60.1 bits (144), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 49/180 (27%), Positives = 82/180 (45%), Gaps = 13/180 (7%)

Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 349
           VY +GS S+  L  G Q   LQP+   +F         + AG      + + G V   GK
Sbjct: 374 VYVWGSNSSHQLVEGTQEKILQPKLAPSFS----DAQTIEAGQYCTFVISTDGSVRACGK 429

Query: 350 GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKR----KTFVLVDTGSVYGFGWMGFG 405
           G  G LG GD  +++  + L + + H +++  +  +     T      G V+ +G   +G
Sbjct: 430 GSYGRLGLGDSNNQSTLKKL-TFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYG 488

Query: 406 SLGFPDRGVSDKVLRPRILD-SLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 464
            LG    G S     P+++   L+   V  +S G  H+  VT+ G L+ +G+ +  +LGH
Sbjct: 489 KLG---HGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGH 545



 Score = 49.3 bits (116), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 29/100 (29%), Positives = 48/100 (48%), Gaps = 2/100 (2%)

Query: 125 LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQV 184
           L S   V++ G   C  LG G      +    I   +A  +V VS  ++H   +    +V
Sbjct: 629 LTSTGQVYAWGCGAC--LGCGSSEATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEV 686

Query: 185 FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           +  G+NS   CG  ++  PI +P+ V  L G+  +Q++AG
Sbjct: 687 YAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAG 726



 Score = 49.3 bits (116), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 41/143 (28%), Positives = 67/143 (46%), Gaps = 9/143 (6%)

Query: 344  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 403
            VY WG G  G L    E  + +  P ++     A QV   +  TFV+   G+V   G   
Sbjct: 4002 VYLWGAGRHGQLA---EAGRNVMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGS 4058

Query: 404  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLY---HTVVVTDRGRLFGFGDNERA 460
            +G LG   +G SD +    ++ +L+   V+Q+ T      H++ +T+ G +F +GD +  
Sbjct: 4059 YGRLG---QGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYG 4115

Query: 461  QLGHDTLRGCLEPTEIFIQEMEE 483
            +LGH        P +I   + EE
Sbjct: 4116 KLGHGNSDRQRRPRQIEALQGEE 4138


>gi|354474338|ref|XP_003499388.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like
            [Cricetulus griseus]
          Length = 4859

 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 102/339 (30%), Positives = 167/339 (49%), Gaps = 17/339 (5%)

Query: 115  QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQV---SA 170
            Q+  G+  T +I +N +V +CG    G LG G      V  T I+      V Q+     
Sbjct: 4029 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHV-LTVISALQGFVVTQLVTSCG 4087

Query: 171  SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
            S+ H+  + +SG+VF+ GD      GH +++R   RPR +EAL+G    Q++ G   +  
Sbjct: 4088 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQMSCGFKHSAV 4146

Query: 231  LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSVVQIAAGPSYMLAVTGNG 288
            +T  G + T G+  +G+LG G+T ++  P+ +  LE  ++G   Q+A G ++ LAV+ +G
Sbjct: 4147 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIG---QVACGLNHTLAVSADG 4203

Query: 289  -VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 347
             +V++FG G    LG G    +  P+ +      GI + +V+ G +  VAL   G+VYT+
Sbjct: 4204 SMVWAFGDGDYGKLGLGNSTAKSSPQKVDVL--CGIGIKKVACGTQFSVALTKDGHVYTF 4261

Query: 348  GKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSL 407
            G+     L  G   +   P+ +  L   +   V      T  L  TG VY +G    G L
Sbjct: 4262 GQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQL 4321

Query: 408  GFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT 446
            G    G ++ V  P ++  L+  ++ QIS G  H+   T
Sbjct: 4322 GL---GHTNHVREPTLVTVLQGKNIRQISAGRCHSAAWT 4357



 Score =  109 bits (273), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 91/315 (28%), Positives = 144/315 (45%), Gaps = 25/315 (7%)

Query: 160 PSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTN------RPIFRPRLVEAL 213
           PS +    + A +     +   G V  CG  S    G  D+N      +  F P    ++
Sbjct: 400 PSFSDAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPH--RSI 457

Query: 214 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
           K V   + + G   T   T  G V + G   +G+LGHG++  +  PK I    +   VV 
Sbjct: 458 KKVSSSKGSDG--HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVC 515

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           ++AG  +  AVT +G +Y++G G    LGHG+ +     R I T  +   +V  VS G  
Sbjct: 516 VSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNS----RNIPTLVKDISNVGEVSCGSS 571

Query: 334 HVVALDSSGY-VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVD 392
           H +AL   G  V+++G G  G LGHGD      P+ + +L+     +VCA  + +  L  
Sbjct: 572 HTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTS 631

Query: 393 TGSVYGFG---WMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRG 449
           TG VY +G    +G GS            LRP++++ L A  +  IS G  H + ++   
Sbjct: 632 TGQVYAWGCGACLGCGS-------SEATALRPKLIEELAATRIVDISIGDSHCLSLSHDN 684

Query: 450 RLFGFGDNERAQLGH 464
            ++ +G+N   Q G 
Sbjct: 685 EVYAWGNNSMGQCGQ 699



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 87/324 (26%), Positives = 150/324 (46%), Gaps = 13/324 (4%)

Query: 160  PSAAHVVQVSASENHAAFVLQS-GQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPC 218
            PS +   QV   +N   FV+Q+ G V  CG+ S    G  +++  +    ++ AL+G   
Sbjct: 4022 PSFSQAQQVICGQN-CTFVIQANGTVLACGEGSYGRLGQGNSDD-LHVLTVISALQGFVV 4079

Query: 219  KQVTAGLNFTGF---LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA 275
             Q+       G    LT  G V + G   +G+LGHG++  +  P+ I  L+    VVQ++
Sbjct: 4080 TQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQG-EEVVQMS 4138

Query: 276  AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHV 335
             G  +   VT +G +++FG+G    LG G   ++  P  +     +G  + +V+ G  H 
Sbjct: 4139 CGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTAL--EGYQIGQVACGLNHT 4196

Query: 336  VALDSSG-YVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 394
            +A+ + G  V+ +G G  G LG G+   K+ P+ +  L      +V    + +  L   G
Sbjct: 4197 LAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDG 4256

Query: 395  SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 454
             VY FG      +G P+ G +    RP+ +  L    +  ++ G  HT+ +   G ++ +
Sbjct: 4257 HVYTFGQDRL--IGLPE-GRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAW 4313

Query: 455  GDNERAQLGHDTLRGCLEPTEIFI 478
            G N   QLG        EPT + +
Sbjct: 4314 GSNSEGQLGLGHTNHVREPTLVTV 4337



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 89/266 (33%), Positives = 128/266 (48%), Gaps = 14/266 (5%)

Query: 122 HTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
           HTL   +   VFS G    G LGHG  +TQ              VV VSA   H+A V +
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528

Query: 181 SGQVFTCGDNSSFCCGHRDTN-RPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH-VH 238
            G+++T G+      GH D+N R I  P LV+ +  V   +V+ G + T  L+  G  V 
Sbjct: 529 DGELYTWGEGDFGRLGHGDSNSRNI--PTLVKDISNV--GEVSCGSSHTIALSKDGRTVW 584

Query: 239 TCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
           + G   +G+LGHGDT     PK I  L+ +  + ++ AG    LA+T  G VY++G G+ 
Sbjct: 585 SFGGGDNGKLGHGDTNRVYKPKVIEALQGM-FIRKVCAGSQSSLALTSTGQVYAWGCGA- 642

Query: 299 FCLGHG-EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 357
            CLG G  +   L+P+ I+        +V +S GD H ++L     VY WG    G  G 
Sbjct: 643 -CLGCGSSEATALRPKLIEEL--AATRIVDISIGDSHCLSLSHDNEVYAWGNNSMGQCGQ 699

Query: 358 GDEIDK-TLPEPLSSLKSHLAVQVCA 382
           G+     T P+ +S L      Q+ A
Sbjct: 700 GNSTGPITKPKKVSGLDGIAIQQISA 725



 Score = 84.7 bits (208), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 68/230 (29%), Positives = 108/230 (46%), Gaps = 11/230 (4%)

Query: 237  VHTCGSNTHGQLGH-GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 295
            V+  G+  HGQL   G  +  P   + AP        Q+  G +    +  NG V + G 
Sbjct: 3997 VYLWGAGRHGQLAEAGRNVMVP---ATAP--SFSQAQQVICGQNCTFVIQANGTVLACGE 4051

Query: 296  GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG-DEHVVALDSSGYVYTWGKGYCGA 354
            GS   LG G   D      I   +   +  +  S G D H +AL  SG V++WG G  G 
Sbjct: 4052 GSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGK 4111

Query: 355  LGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGV 414
            LGHG+   +  P  + +L+    VQ+    + + V+   G ++ FG   +G LG  +   
Sbjct: 4112 LGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN--T 4169

Query: 415  SDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRL-FGFGDNERAQLG 463
            S+K L P  + +L  + + Q++ GL HT+ V+  G + + FGD +  +LG
Sbjct: 4170 SNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLG 4218



 Score = 60.1 bits (144), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 49/180 (27%), Positives = 82/180 (45%), Gaps = 13/180 (7%)

Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 349
           VY +GS S+  L  G Q   LQP+   +F         + AG      + + G V   GK
Sbjct: 374 VYVWGSNSSHQLVEGTQEKILQPKLAPSFS----DAQTIEAGQYCTFVISTDGSVRACGK 429

Query: 350 GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKR----KTFVLVDTGSVYGFGWMGFG 405
           G  G LG GD  +++  + L + + H +++  +  +     T      G V+ +G   +G
Sbjct: 430 GSYGRLGLGDSNNQSTLKKL-TFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYG 488

Query: 406 SLGFPDRGVSDKVLRPRILD-SLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 464
            LG    G S     P+++   L+   V  +S G  H+  VT+ G L+ +G+ +  +LGH
Sbjct: 489 KLG---HGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGH 545



 Score = 49.3 bits (116), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 41/143 (28%), Positives = 67/143 (46%), Gaps = 9/143 (6%)

Query: 344  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 403
            VY WG G  G L    E  + +  P ++     A QV   +  TFV+   G+V   G   
Sbjct: 3997 VYLWGAGRHGQLA---EAGRNVMVPATAPSFSQAQQVICGQNCTFVIQANGTVLACGEGS 4053

Query: 404  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLY---HTVVVTDRGRLFGFGDNERA 460
            +G LG   +G SD +    ++ +L+   V+Q+ T      H++ +T+ G +F +GD +  
Sbjct: 4054 YGRLG---QGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYG 4110

Query: 461  QLGHDTLRGCLEPTEIFIQEMEE 483
            +LGH        P +I   + EE
Sbjct: 4111 KLGHGNSDRQRRPRQIEALQGEE 4133



 Score = 48.5 bits (114), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 28/100 (28%), Positives = 48/100 (48%), Gaps = 2/100 (2%)

Query: 125 LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQV 184
           L S   V++ G   C  LG G      +    I   +A  +V +S  ++H   +    +V
Sbjct: 629 LTSTGQVYAWGCGAC--LGCGSSEATALRPKLIEELAATRIVDISIGDSHCLSLSHDNEV 686

Query: 185 FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           +  G+NS   CG  ++  PI +P+ V  L G+  +Q++AG
Sbjct: 687 YAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAG 726


>gi|218191372|gb|EEC73799.1| hypothetical protein OsI_08500 [Oryza sativa Indica Group]
          Length = 988

 Score =  127 bits (319), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 100/347 (28%), Positives = 160/347 (46%), Gaps = 21/347 (6%)

Query: 131 VFSCGSSLCGVLGHGPETTQCVSFTRI-NFPSAAHVVQVSASENHAAFVLQSGQVFTCGD 189
           +F  G     VL HG  +   VS  R+ N      V  V+  E HAA V + G+VF+ G 
Sbjct: 182 IFVWGEVPGNVLDHGDVSKANVSLPRLLNTTHIIDVQSVACGEKHAAIVTKQGEVFSWGV 241

Query: 190 NSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLG 249
           ++    GH+  +  +  P+++E+L     K +  G   T  ++I G ++  G  TH    
Sbjct: 242 DNGGRLGHK-VSVSVSDPKIIESLASTRVKAIAFGAKHTCAVSISGELYEWGEGTHCLGL 300

Query: 250 HGDTLDRPTP---KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ 306
            GD   R      K   PL+ + S+++IA G  +   ++  G ++++G G+   LGHG+ 
Sbjct: 301 WGDQYQRSQWFPHKLFGPLDGI-SILKIACGHWHTAIISSAGQIFTYGDGTFGVLGHGDT 359

Query: 307 HDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL----------DSSGYVYTWGKGYCGALG 356
               +P+ +++   KG+    ++ G  H  A+            SG ++TWG    G LG
Sbjct: 360 LTVARPKQVESL--KGVRAKAIACGPWHTAAIVERMGTVKSNAPSGKLFTWGDADRGKLG 417

Query: 357 HGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSD 416
           H D+  K +P  +  L      QV   K +T VL  TG V+  G    G LG P   +S+
Sbjct: 418 HADKKMKLVPTCVEPLNDFDFAQVSCAKAQTIVLTITGVVFTIGSKEHGRLGNP---LSE 474

Query: 417 KVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 463
                 I   L+   V +IS+G  H  V+T  G++F +G     QLG
Sbjct: 475 DTSICLIEGPLKTEFVREISSGSSHIAVLTMNGKVFTWGKGTEGQLG 521



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 80/294 (27%), Positives = 136/294 (46%), Gaps = 18/294 (6%)

Query: 184 VFTCGDNSSFCCGHRDTNRP-IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 242
           +F  G+       H D ++  +  PRL+     +  + V  G      +T +G V + G 
Sbjct: 182 IFVWGEVPGNVLDHGDVSKANVSLPRLLNTTHIIDVQSVACGEKHAAIVTKQGEVFSWGV 241

Query: 243 NTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLG 302
           +  G+LGH  ++    PK I  L     V  IA G  +  AV+ +G +Y +G G++ CLG
Sbjct: 242 DNGGRLGHKVSVSVSDPKIIESLAST-RVKAIAFGAKHTCAVSISGELYEWGEGTH-CLG 299

Query: 303 -HGEQHDELQPRAIQTF-RRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 360
             G+Q+   Q    + F    GI +++++ G  H   + S+G ++T+G G  G LGHGD 
Sbjct: 300 LWGDQYQRSQWFPHKLFGPLDGISILKIACGHWHTAIISSAGQIFTYGDGTFGVLGHGDT 359

Query: 361 IDKTLPEPLSSLKSHLAVQVCARKRKTFVLVD----------TGSVYGFGWMGFGSLGFP 410
           +    P+ + SLK   A  +      T  +V+          +G ++ +G    G LG  
Sbjct: 360 LTVARPKQVESLKGVRAKAIACGPWHTAAIVERMGTVKSNAPSGKLFTWGDADRGKLGHA 419

Query: 411 DRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 464
           D+ +    L P  ++ L     +Q+S     T+V+T  G +F  G  E  +LG+
Sbjct: 420 DKKMK---LVPTCVEPLNDFDFAQVSCAKAQTIVLTITGVVFTIGSKEHGRLGN 470



 Score = 98.2 bits (243), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 76/264 (28%), Positives = 120/264 (45%), Gaps = 27/264 (10%)

Query: 133 SCGSSLCGVLGHGPETTQCV-----SFTRIN-FP-------SAAHVVQVSASENHAAFVL 179
           +C  S+ G L    E T C+      + R   FP           +++++    H A + 
Sbjct: 279 TCAVSISGELYEWGEGTHCLGLWGDQYQRSQWFPHKLFGPLDGISILKIACGHWHTAIIS 338

Query: 180 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR----- 234
            +GQ+FT GD +    GH DT   + RP+ VE+LKGV  K +  G   T  +  R     
Sbjct: 339 SAGQIFTYGDGTFGVLGHGDT-LTVARPKQVESLKGVRAKAIACGPWHTAAIVERMGTVK 397

Query: 235 -----GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 289
                G + T G    G+LGH D   +  P  + PL +     Q++   +  + +T  GV
Sbjct: 398 SNAPSGKLFTWGDADRGKLGHADKKMKLVPTCVEPLNDF-DFAQVSCAKAQTIVLTITGV 456

Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 349
           V++ GS  +  LG+    D      +     K   V  +S+G  H+  L  +G V+TWGK
Sbjct: 457 VFTIGSKEHGRLGNPLSED--TSICLIEGPLKTEFVREISSGSSHIAVLTMNGKVFTWGK 514

Query: 350 GYCGALGHGDEIDKTLPEPLSSLK 373
           G  G LG GD +D++ P  + +L+
Sbjct: 515 GTEGQLGLGDYVDRSYPTLVEALE 538



 Score = 78.2 bits (191), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 83/351 (23%), Positives = 143/351 (40%), Gaps = 36/351 (10%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGH-------GPETTQCVSFTRINFPSAAHVVQ 167
           +  G  H  +++    VFS G    G LGH        P+  + ++ TR+          
Sbjct: 220 VACGEKHAAIVTKQGEVFSWGVDNGGRLGHKVSVSVSDPKIIESLASTRVK--------A 271

Query: 168 VSASENHAAFVLQSGQVFTCGDNSSFCCG---HRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           ++    H   V  SG+++  G+ +  C G    +      F  +L   L G+   ++  G
Sbjct: 272 IAFGAKHTCAVSISGELYEWGEGT-HCLGLWGDQYQRSQWFPHKLFGPLDGISILKIACG 330

Query: 225 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 284
              T  ++  G + T G  T G LGHGDTL    PK +  L+ V +   IA GP +  A+
Sbjct: 331 HWHTAIISSAGQIFTYGDGTFGVLGHGDTLTVARPKQVESLKGVRAKA-IACGPWHTAAI 389

Query: 285 ----------TGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEH 334
                       +G ++++G      LGH ++  +L P  ++          +VS     
Sbjct: 390 VERMGTVKSNAPSGKLFTWGDADRGKLGHADKKMKLVPTCVEPLN--DFDFAQVSCAKAQ 447

Query: 335 VVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 394
            + L  +G V+T G    G LG+    D ++      LK+    ++ +      VL   G
Sbjct: 448 TIVLTITGVVFTIGSKEHGRLGNPLSEDTSICLIEGPLKTEFVREISSGSSHIAVLTMNG 507

Query: 395 SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVV 445
            V+ +G    G LG  D    D+   P ++++L    V  I+ G   T+ +
Sbjct: 508 KVFTWGKGTEGQLGLGD--YVDRSY-PTLVEALEDKQVHSIACGFNFTMAI 555



 Score = 75.9 bits (185), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 61/218 (27%), Positives = 101/218 (46%), Gaps = 20/218 (9%)

Query: 271 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 330
           V  +A G  +   VT  G V+S+G  +   LGH        P+ I++       V  ++ 
Sbjct: 217 VQSVACGEKHAAIVTKQGEVFSWGVDNGGRLGHKVSVSVSDPKIIESL--ASTRVKAIAF 274

Query: 331 GDEHVVALDSSGYVYTWGKG-YCGALGHGDEIDKT--LPEPL-SSLKSHLAVQVCARKRK 386
           G +H  A+  SG +Y WG+G +C  L  GD+  ++   P  L   L     +++      
Sbjct: 275 GAKHTCAVSISGELYEWGEGTHCLGLW-GDQYQRSQWFPHKLFGPLDGISILKIACGHWH 333

Query: 387 TFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT 446
           T ++   G ++ +G   FG LG  D   +  V RP+ ++SL+      I+ G +HT  + 
Sbjct: 334 TAIISSAGQIFTYGDGTFGVLGHGD---TLTVARPKQVESLKGVRAKAIACGPWHTAAIV 390

Query: 447 DR----------GRLFGFGDNERAQLGHDTLRGCLEPT 474
           +R          G+LF +GD +R +LGH   +  L PT
Sbjct: 391 ERMGTVKSNAPSGKLFTWGDADRGKLGHADKKMKLVPT 428



 Score = 56.6 bits (135), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 47/182 (25%), Positives = 85/182 (46%), Gaps = 7/182 (3%)

Query: 290 VYSFGSGSNFCLGHGE--QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 347
           ++ +G      L HG+  + +   PR + T     I V  V+ G++H   +   G V++W
Sbjct: 182 IFVWGEVPGNVLDHGDVSKANVSLPRLLNTTHI--IDVQSVACGEKHAAIVTKQGEVFSW 239

Query: 348 GKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSL 407
           G    G LGH   +  + P+ + SL S     +    + T  +  +G +Y +G  G   L
Sbjct: 240 GVDNGGRLGHKVSVSVSDPKIIESLASTRVKAIAFGAKHTCAVSISGELYEWG-EGTHCL 298

Query: 408 G-FPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH-D 465
           G + D+    +    ++   L    + +I+ G +HT +++  G++F +GD     LGH D
Sbjct: 299 GLWGDQYQRSQWFPHKLFGPLDGISILKIACGHWHTAIISSAGQIFTYGDGTFGVLGHGD 358

Query: 466 TL 467
           TL
Sbjct: 359 TL 360


>gi|392350138|ref|XP_236362.6| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Rattus
            norvegicus]
          Length = 4859

 Score =  127 bits (319), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 102/339 (30%), Positives = 167/339 (49%), Gaps = 17/339 (5%)

Query: 115  QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQV---SA 170
            Q+  G+  T +I +N +V +CG    G LG G      V  T I+      V Q+     
Sbjct: 4029 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHV-LTVISALQGFVVTQLVTSCG 4087

Query: 171  SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
            S+ H+  + +SG+VF+ GD      GH +++R   RPR +EAL+G    Q++ G   +  
Sbjct: 4088 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQMSCGFKHSAV 4146

Query: 231  LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSVVQIAAGPSYMLAVTGNG 288
            +T  G + T G+  +G+LG G+T ++  P+ +  LE  ++G   Q+A G ++ LAV+ +G
Sbjct: 4147 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIG---QVACGLNHTLAVSADG 4203

Query: 289  -VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 347
             +V++FG G    LG G    +  P+ +      GI + +V+ G +  VAL   G+VYT+
Sbjct: 4204 SMVWAFGDGDYGKLGLGNSTAKSSPQKVDVL--CGIGIKKVACGTQFSVALTKDGHVYTF 4261

Query: 348  GKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSL 407
            G+     L  G   +   P+ +  L   +   V      T  L  TG VY +G    G L
Sbjct: 4262 GQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQL 4321

Query: 408  GFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT 446
            G    G ++ V  P ++  L+  ++ QIS G  H+   T
Sbjct: 4322 GL---GHTNHVREPTLVTVLQGKNIRQISAGRCHSAAWT 4357



 Score =  109 bits (272), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 91/315 (28%), Positives = 144/315 (45%), Gaps = 25/315 (7%)

Query: 160 PSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTN------RPIFRPRLVEAL 213
           PS +    + A +     +   G V  CG  S    G  D+N      +  F P    ++
Sbjct: 400 PSFSDAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPH--RSI 457

Query: 214 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
           K V   + + G   T   T  G V + G   +G+LGHG++  +  PK I    +   VV 
Sbjct: 458 KKVSSSKGSDG--HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVC 515

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           ++AG  +  AVT +G +Y++G G    LGHG+ +     R I T  +   +V  VS G  
Sbjct: 516 VSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNS----RNIPTLVKDISNVGEVSCGSS 571

Query: 334 HVVALDSSGY-VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVD 392
           H +AL   G  V+++G G  G LGHGD      P+ + +L+     +VCA  + +  L  
Sbjct: 572 HTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTS 631

Query: 393 TGSVYGFG---WMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRG 449
           TG VY +G    +G GS            LRP++++ L A  +  IS G  H + ++   
Sbjct: 632 TGQVYAWGCGACLGCGS-------SEATALRPKLIEELAATRIVDISIGDSHCLSLSHDN 684

Query: 450 RLFGFGDNERAQLGH 464
            ++ +G+N   Q G 
Sbjct: 685 EVYAWGNNSMGQCGQ 699



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 89/266 (33%), Positives = 128/266 (48%), Gaps = 14/266 (5%)

Query: 122 HTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
           HTL   +   VFS G    G LGHG  +TQ              VV VSA   H+A V +
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528

Query: 181 SGQVFTCGDNSSFCCGHRDTN-RPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH-VH 238
            G+++T G+      GH D+N R I  P LV+ +  V   +V+ G + T  L+  G  V 
Sbjct: 529 DGELYTWGEGDFGRLGHGDSNSRNI--PTLVKDISNV--GEVSCGSSHTIALSKDGRTVW 584

Query: 239 TCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
           + G   +G+LGHGDT     PK I  L+ +  + ++ AG    LA+T  G VY++G G+ 
Sbjct: 585 SFGGGDNGKLGHGDTNRVYKPKVIEALQGM-FIRKVCAGSQSSLALTSTGQVYAWGCGA- 642

Query: 299 FCLGHG-EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 357
            CLG G  +   L+P+ I+        +V +S GD H ++L     VY WG    G  G 
Sbjct: 643 -CLGCGSSEATALRPKLIEEL--AATRIVDISIGDSHCLSLSHDNEVYAWGNNSMGQCGQ 699

Query: 358 GDEIDK-TLPEPLSSLKSHLAVQVCA 382
           G+     T P+ +S L      Q+ A
Sbjct: 700 GNSTGPITKPKKVSGLDGIAIQQISA 725



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 87/324 (26%), Positives = 150/324 (46%), Gaps = 13/324 (4%)

Query: 160  PSAAHVVQVSASENHAAFVLQS-GQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPC 218
            PS +   QV   +N   FV+Q+ G V  CG+ S    G  +++  +    ++ AL+G   
Sbjct: 4022 PSFSQAQQVICGQN-CTFVIQANGTVLACGEGSYGRLGQGNSDD-LHVLTVISALQGFVV 4079

Query: 219  KQVTAGLNFTGF---LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA 275
             Q+       G    LT  G V + G   +G+LGHG++  +  P+ I  L+    VVQ++
Sbjct: 4080 TQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQG-EEVVQMS 4138

Query: 276  AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHV 335
             G  +   VT +G +++FG+G    LG G   ++  P  +     +G  + +V+ G  H 
Sbjct: 4139 CGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTAL--EGYQIGQVACGLNHT 4196

Query: 336  VALDSSG-YVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 394
            +A+ + G  V+ +G G  G LG G+   K+ P+ +  L      +V    + +  L   G
Sbjct: 4197 LAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDG 4256

Query: 395  SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 454
             VY FG      +G P+ G +    RP+ +  L    +  ++ G  HT+ +   G ++ +
Sbjct: 4257 HVYTFGQDRL--IGLPE-GRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAW 4313

Query: 455  GDNERAQLGHDTLRGCLEPTEIFI 478
            G N   QLG        EPT + +
Sbjct: 4314 GSNSEGQLGLGHTNHVREPTLVTV 4337



 Score = 84.7 bits (208), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 68/230 (29%), Positives = 108/230 (46%), Gaps = 11/230 (4%)

Query: 237  VHTCGSNTHGQLGH-GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 295
            V+  G+  HGQL   G  +  P   + AP        Q+  G +    +  NG V + G 
Sbjct: 3997 VYLWGAGRHGQLAEAGRNVMVP---ATAP--SFSQAQQVICGQNCTFVIQANGTVLACGE 4051

Query: 296  GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG-DEHVVALDSSGYVYTWGKGYCGA 354
            GS   LG G   D      I   +   +  +  S G D H +AL  SG V++WG G  G 
Sbjct: 4052 GSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGK 4111

Query: 355  LGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGV 414
            LGHG+   +  P  + +L+    VQ+    + + V+   G ++ FG   +G LG  +   
Sbjct: 4112 LGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN--T 4169

Query: 415  SDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRL-FGFGDNERAQLG 463
            S+K L P  + +L  + + Q++ GL HT+ V+  G + + FGD +  +LG
Sbjct: 4170 SNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLG 4218



 Score = 59.7 bits (143), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 49/180 (27%), Positives = 82/180 (45%), Gaps = 13/180 (7%)

Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 349
           VY +GS S+  L  G Q   LQP+   +F         + AG      + + G V   GK
Sbjct: 374 VYVWGSNSSHQLVEGTQEKILQPKLAPSFS----DAQTIEAGQYCTFVISTDGSVRACGK 429

Query: 350 GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKR----KTFVLVDTGSVYGFGWMGFG 405
           G  G LG GD  +++  + L + + H +++  +  +     T      G V+ +G   +G
Sbjct: 430 GSYGRLGLGDSNNQSTLKKL-TFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYG 488

Query: 406 SLGFPDRGVSDKVLRPRILD-SLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 464
            LG    G S     P+++   L+   V  +S G  H+  VT+ G L+ +G+ +  +LGH
Sbjct: 489 KLG---HGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGH 545



 Score = 48.9 bits (115), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 41/143 (28%), Positives = 67/143 (46%), Gaps = 9/143 (6%)

Query: 344  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 403
            VY WG G  G L    E  + +  P ++     A QV   +  TFV+   G+V   G   
Sbjct: 3997 VYLWGAGRHGQLA---EAGRNVMVPATAPSFSQAQQVICGQNCTFVIQANGTVLACGEGS 4053

Query: 404  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLY---HTVVVTDRGRLFGFGDNERA 460
            +G LG   +G SD +    ++ +L+   V+Q+ T      H++ +T+ G +F +GD +  
Sbjct: 4054 YGRLG---QGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYG 4110

Query: 461  QLGHDTLRGCLEPTEIFIQEMEE 483
            +LGH        P +I   + EE
Sbjct: 4111 KLGHGNSDRQRRPRQIEALQGEE 4133



 Score = 48.5 bits (114), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 28/100 (28%), Positives = 48/100 (48%), Gaps = 2/100 (2%)

Query: 125 LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQV 184
           L S   V++ G   C  LG G      +    I   +A  +V +S  ++H   +    +V
Sbjct: 629 LTSTGQVYAWGCGAC--LGCGSSEATALRPKLIEELAATRIVDISIGDSHCLSLSHDNEV 686

Query: 185 FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           +  G+NS   CG  ++  PI +P+ V  L G+  +Q++AG
Sbjct: 687 YAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAG 726


>gi|350596671|ref|XP_003361480.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like, partial
            [Sus scrofa]
          Length = 2561

 Score =  127 bits (319), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 103/339 (30%), Positives = 167/339 (49%), Gaps = 17/339 (5%)

Query: 115  QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQV---SA 170
            Q+  G+  T +I +N +V +CG    G LG G      V  T I+      V Q+     
Sbjct: 1642 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHV-LTVISALQGFVVTQLVTSCG 1700

Query: 171  SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
            S+ H+  + +SG+VF+ GD      GH +++R   RPR +EAL+G    Q++ G   +  
Sbjct: 1701 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQMSCGFKHSAV 1759

Query: 231  LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSVVQIAAGPSYMLAVTGNG 288
            +T  G + T G+  +G+LG G+T ++  P+ +  LE  ++G   Q+A G ++ LAV+ +G
Sbjct: 1760 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIG---QVACGLNHTLAVSADG 1816

Query: 289  -VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 347
             +V++FG G    LG G    +  P+ +      GI + +V+ G +  VAL   G+VYT+
Sbjct: 1817 SMVWAFGDGDYGKLGLGNSTAKSSPQKVDVL--CGIGIKKVACGTQFSVALTKDGHVYTF 1874

Query: 348  GKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSL 407
            G+     L  G   +   P+ +  L   +   V      T  L  TG VY +G    G L
Sbjct: 1875 GQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQL 1934

Query: 408  GFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT 446
            G    G ++ V  P ++  L+  +V QIS G  H+   T
Sbjct: 1935 GL---GHTNHVREPTLVTVLQGKNVRQISAGRCHSAAWT 1970



 Score = 96.7 bits (239), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 84/323 (26%), Positives = 147/323 (45%), Gaps = 11/323 (3%)

Query: 160  PSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCK 219
            PS +   QV   +N    +  +G V  CG+ S    G  +++  +    ++ AL+G    
Sbjct: 1635 PSFSQAQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDD-LHVLTVISALQGFVVT 1693

Query: 220  QVTAGLNFTGF---LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA 276
            Q+       G    LT  G V + G   +G+LGHG++  +  P+ I  L+    VVQ++ 
Sbjct: 1694 QLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQG-EEVVQMSC 1752

Query: 277  GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVV 336
            G  +   VT +G +++FG+G    LG G   ++  P  +     +G  + +V+ G  H +
Sbjct: 1753 GFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTAL--EGYQIGQVACGLNHTL 1810

Query: 337  ALDSSG-YVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGS 395
            A+ + G  V+ +G G  G LG G+   K+ P+ +  L      +V    + +  L   G 
Sbjct: 1811 AVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGH 1870

Query: 396  VYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFG 455
            VY FG      +G P+ G +    RP+ +  L    +  ++ G  HT+ +   G ++ +G
Sbjct: 1871 VYTFGQDRL--IGLPE-GRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWG 1927

Query: 456  DNERAQLGHDTLRGCLEPTEIFI 478
             N   QLG        EPT + +
Sbjct: 1928 SNSEGQLGLGHTNHVREPTLVTV 1950



 Score = 84.7 bits (208), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 68/230 (29%), Positives = 108/230 (46%), Gaps = 11/230 (4%)

Query: 237  VHTCGSNTHGQLGH-GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 295
            V+  G+  HGQL   G  +  P   + AP        Q+  G +    +  NG V + G 
Sbjct: 1610 VYLWGAGRHGQLAEAGRNVMVP---AAAP--SFSQAQQVICGQNCTFVIQANGTVLACGE 1664

Query: 296  GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG-DEHVVALDSSGYVYTWGKGYCGA 354
            GS   LG G   D      I   +   +  +  S G D H +AL  SG V++WG G  G 
Sbjct: 1665 GSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGK 1724

Query: 355  LGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGV 414
            LGHG+   +  P  + +L+    VQ+    + + V+   G ++ FG   +G LG  +   
Sbjct: 1725 LGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN--T 1782

Query: 415  SDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRL-FGFGDNERAQLG 463
            S+K L P  + +L  + + Q++ GL HT+ V+  G + + FGD +  +LG
Sbjct: 1783 SNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLG 1831



 Score = 49.7 bits (117), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 41/143 (28%), Positives = 67/143 (46%), Gaps = 9/143 (6%)

Query: 344  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 403
            VY WG G  G L    E  + +  P ++     A QV   +  TFV+   G+V   G   
Sbjct: 1610 VYLWGAGRHGQLA---EAGRNVMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGS 1666

Query: 404  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLY---HTVVVTDRGRLFGFGDNERA 460
            +G LG   +G SD +    ++ +L+   V+Q+ T      H++ +T+ G +F +GD +  
Sbjct: 1667 YGRLG---QGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYG 1723

Query: 461  QLGHDTLRGCLEPTEIFIQEMEE 483
            +LGH        P +I   + EE
Sbjct: 1724 KLGHGNSDRQRRPRQIEALQGEE 1746


>gi|126649317|ref|XP_001388330.1| uvb-resistance protein uvr8 [Cryptosporidium parvum Iowa II]
 gi|32398856|emb|CAD98566.1| uvb-resistance protein uvr8, possible [Cryptosporidium parvum]
 gi|126117424|gb|EAZ51524.1| uvb-resistance protein uvr8, putative [Cryptosporidium parvum Iowa
           II]
          Length = 487

 Score =  127 bits (319), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 107/346 (30%), Positives = 170/346 (49%), Gaps = 20/346 (5%)

Query: 115 QITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
           +++ G  ++  I+NS  +   G   CG LG G     C+   R+N  S  +V+QV+ S+ 
Sbjct: 46  KVSCGSNYSAAITNSGDLILWGYGGCGQLGFG-NLEDCL-VPRVNL-SLKNVIQVACSDR 102

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRD-----TNRPIFRPRLVEALKGVPCKQVTAGLNFT 228
           H A +L +G+++T G + +   GH       +N  + +P  V+AL+G    QV+ G   T
Sbjct: 103 HTAAILSNGELYTWGCSKNGKLGHGQFELSISNNVVSQPMKVKALEGEKVIQVSCGSYHT 162

Query: 229 GFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG 288
           G LT      T G    G+LGHGDT D  TPK I  L  +  + +I+ G  +   +   G
Sbjct: 163 GCLTDDKKALTWGLGLQGRLGHGDTQDIFTPKLIESLAGL-PIKEISCGGHHTAILLVTG 221

Query: 289 VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 348
            +Y FG G+   LG G   D L PR ++    + I + +VS G +H  A+   G VYTWG
Sbjct: 222 KLYMFGGGAFGKLGFGSTDDVLIPRLLEG-PLEDIQITKVSLGSQHSAAVTKCGKVYTWG 280

Query: 349 KGYCGALGH---GDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFG 405
           +G  G LGH   G E D   P+ LS+L+    V +      +  L D G +Y +G     
Sbjct: 281 QG--GRLGHIFNGPEHDFLSPKRLSNLEKAFIVDISCGNSHSVALSDVGDIYTWGMT--K 336

Query: 406 SLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRL 451
           ++G   +G+   +  P     L+  ++ Q+     H++ ++D G L
Sbjct: 337 NIGHGIQGIHPNM--PSKHPILQNKNIVQVVCSSSHSIALSDIGAL 380



 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 85/266 (31%), Positives = 131/266 (49%), Gaps = 18/266 (6%)

Query: 207 PRLVEALKGVP-CKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL 265
           P LV+ L+ +    +V+ G N++  +T  G +   G    GQLG G+  D   P+    L
Sbjct: 32  PHLVDGLRHLSSISKVSCGSNYSAAITNSGDLILWGYGGCGQLGFGNLEDCLVPRVNLSL 91

Query: 266 EEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDEL------QPRAIQTFR 319
           +   +V+Q+A    +  A+  NG +Y++G   N  LGHG+    +      QP  ++   
Sbjct: 92  K---NVIQVACSDRHTAAILSNGELYTWGCSKNGKLGHGQFELSISNNVVSQPMKVKAL- 147

Query: 320 RKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQ 379
            +G  V++VS G  H   L       TWG G  G LGHGD  D   P+ + SL      +
Sbjct: 148 -EGEKVIQVSCGSYHTGCLTDDKKALTWGLGLQGRLGHGDTQDIFTPKLIESLAGLPIKE 206

Query: 380 VCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDS-LRAHHVSQISTG 438
           +      T +L+ TG +Y FG   FG LGF   G +D VL PR+L+  L    ++++S G
Sbjct: 207 ISCGGHHTAILLVTGKLYMFGGGAFGKLGF---GSTDDVLIPRLLEGPLEDIQITKVSLG 263

Query: 439 LYHTVVVTDRGRLFGFGDNERAQLGH 464
             H+  VT  G+++ +G   R  LGH
Sbjct: 264 SQHSAAVTKCGKVYTWGQGGR--LGH 287



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 68/239 (28%), Positives = 110/239 (46%), Gaps = 13/239 (5%)

Query: 241 GSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 300
           GS  +GQ G       P P  +  L  + S+ +++ G +Y  A+T +G +  +G G    
Sbjct: 14  GSTEYGQHGSKGEEVSPGPHLVDGLRHLSSISKVSCGSNYSAAITNSGDLILWGYGGCGQ 73

Query: 301 LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGD- 359
           LG G   D L PR   + +    +V++V+  D H  A+ S+G +YTWG    G LGHG  
Sbjct: 74  LGFGNLEDCLVPRVNLSLK----NVIQVACSDRHTAAILSNGELYTWGCSKNGKLGHGQF 129

Query: 360 --EIDKTL---PEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGV 414
              I   +   P  + +L+    +QV      T  L D      +G    G LG  D   
Sbjct: 130 ELSISNNVVSQPMKVKALEGEKVIQVSCGSYHTGCLTDDKKALTWGLGLQGRLGHGD--- 186

Query: 415 SDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEP 473
           +  +  P++++SL    + +IS G +HT ++   G+L+ FG     +LG  +    L P
Sbjct: 187 TQDIFTPKLIESLAGLPIKEISCGGHHTAILLVTGKLYMFGGGAFGKLGFGSTDDVLIP 245


>gi|356499563|ref|XP_003518608.1| PREDICTED: uncharacterized protein LOC100805364 [Glycine max]
          Length = 1120

 Score =  127 bits (319), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 92/305 (30%), Positives = 149/305 (48%), Gaps = 21/305 (6%)

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
           HA+ V + G+VFT G+ S    GH    + + +PRLVEAL       V  G   +  +T+
Sbjct: 289 HASLVTRQGEVFTWGEESGGRLGH-GVGKNVVQPRLVEALISTTIDFVACGEFHSCAVTM 347

Query: 234 RGHVHTCGSNTH--GQLGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSYMLAVTGNGVV 290
            G ++T G   H  G LGHG  +    PK IA PLE +  +  +A GP +   +T  G +
Sbjct: 348 AGELYTWGDGMHNAGLLGHGSNVSHWIPKRIAGPLEGL-QIAFVACGPWHTALITSTGQL 406

Query: 291 YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL-----------D 339
           ++FG G+   LGHG++ +   PR +++    G+  + V+ G  H  A+            
Sbjct: 407 FTFGDGTFGVLGHGDRQNVSYPREVESLL--GLRTIAVACGVWHTAAVVEVIATHSGTSI 464

Query: 340 SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGF 399
           SSG ++TWG G    LGHGD+  +  P  +S+L  +   ++      T  L  +G V+  
Sbjct: 465 SSGKLFTWGDGDKNRLGHGDKEARLKPTCVSALIDYNFHKIACGHSLTVGLTTSGRVFTM 524

Query: 400 GWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNER 459
           G   +G LG     +SD  +   + D +    + +I+ G YH  V+T +  ++ +G    
Sbjct: 525 GSTVYGQLG---SSLSDGKVPCLVGDKIAGESIEEIACGAYHVAVLTSKNEVYTWGKGAN 581

Query: 460 AQLGH 464
            +LGH
Sbjct: 582 GRLGH 586



 Score = 88.2 bits (217), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 80/282 (28%), Positives = 126/282 (44%), Gaps = 21/282 (7%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSL--CGVLGHGPETTQCVSFTRINFP-SAAHVVQVSAS 171
           +  G +H+  ++ +  +++ G  +   G+LGHG   +  +   RI  P     +  V+  
Sbjct: 335 VACGEFHSCAVTMAGELYTWGDGMHNAGLLGHGSNVSHWIP-KRIAGPLEGLQIAFVACG 393

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFT--- 228
             H A +  +GQ+FT GD +    GH D    +  PR VE+L G+    V  G+  T   
Sbjct: 394 PWHTALITSTGQLFTFGDGTFGVLGHGDRQN-VSYPREVESLLGLRTIAVACGVWHTAAV 452

Query: 229 --------GFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 280
                   G     G + T G     +LGHGD   R  P  ++ L +  +  +IA G S 
Sbjct: 453 VEVIATHSGTSISSGKLFTWGDGDKNRLGHGDKEARLKPTCVSALIDY-NFHKIACGHSL 511

Query: 281 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 340
            + +T +G V++ GS     LG      ++    +   +  G  +  ++ G  HV  L S
Sbjct: 512 TVGLTTSGRVFTMGSTVYGQLGSSLSDGKVP--CLVGDKIAGESIEEIACGAYHVAVLTS 569

Query: 341 SGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKS-HLAVQVC 381
              VYTWGKG  G LGHGD  D+  P  + +LK  H+    C
Sbjct: 570 KNEVYTWGKGANGRLGHGDIEDRKTPALVEALKDRHVKYIAC 611



 Score = 85.9 bits (211), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 109/450 (24%), Positives = 182/450 (40%), Gaps = 69/450 (15%)

Query: 28  SAVDLAHLELTSKTFGGSHGLYPQKFRSLVDLAASQLCALHSIYAGMSRNVQIELLNRCN 87
           SA D+  + ++S     SHG  P  + +L D+         ++  G  +NV        N
Sbjct: 207 SASDVFRVSVSSAPSTSSHGSAPDDYDALWDVYIWGEVTCENVKVGADKNV--------N 258

Query: 88  GNWKRVLRFLQSVEHSSDIVETSAGNMQITTG-RYHTLLISNSSVFSCGSSLCGVLGHG- 145
               R    L     S+ +++       I  G R+ +L+     VF+ G    G LGHG 
Sbjct: 259 YFSPRADVLLPRPLESNVVLDV----HHIACGVRHASLVTRQGEVFTWGEESGGRLGHGV 314

Query: 146 ------PETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGD--NSSFCCGH 197
                 P   + +  T I+F        V+  E H+  V  +G+++T GD  +++   GH
Sbjct: 315 GKNVVQPRLVEALISTTIDF--------VACGEFHSCAVTMAGELYTWGDGMHNAGLLGH 366

Query: 198 RDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRP 257
                     R+   L+G+    V  G   T  +T  G + T G  T G LGHGD  +  
Sbjct: 367 GSNVSHWIPKRIAGPLEGLQIAFVACGPWHTALITSTGQLFTFGDGTFGVLGHGDRQNVS 426

Query: 258 TPKSIAPLEEVGSVVQIAAGPSYMLAVT-----------GNGVVYSFGSGSNFCLGHGEQ 306
            P+ +  L  + ++  +A G  +  AV             +G ++++G G    LGHG++
Sbjct: 427 YPREVESLLGLRTIA-VACGVWHTAAVVEVIATHSGTSISSGKLFTWGDGDKNRLGHGDK 485

Query: 307 HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH--------- 357
              L+P  +        H  +++ G    V L +SG V+T G    G LG          
Sbjct: 486 EARLKPTCVSALIDYNFH--KIACGHSLTVGLTTSGRVFTMGSTVYGQLGSSLSDGKVPC 543

Query: 358 --GDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVS 415
             GD+I     E ++    H+A           VL     VY +G    G LG  D  + 
Sbjct: 544 LVGDKIAGESIEEIACGAYHVA-----------VLTSKNEVYTWGKGANGRLGHGD--IE 590

Query: 416 DKVLRPRILDSLRAHHVSQISTGLYHTVVV 445
           D+   P ++++L+  HV  I+ G  ++  +
Sbjct: 591 DRKT-PALVEALKDRHVKYIACGSNYSAAI 619



 Score = 82.8 bits (203), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 78/296 (26%), Positives = 133/296 (44%), Gaps = 21/296 (7%)

Query: 204 IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 263
           +  PR +E+   +    +  G+     +T +G V T G  + G+LGHG   +   P+ + 
Sbjct: 266 VLLPRPLESNVVLDVHHIACGVRHASLVTRQGEVFTWGEESGGRLGHGVGKNVVQPRLVE 325

Query: 264 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC--LGHGEQHDELQPRAIQTFRRK 321
            L    ++  +A G  +  AVT  G +Y++G G +    LGHG       P+ I     +
Sbjct: 326 ALIST-TIDFVACGEFHSCAVTMAGELYTWGDGMHNAGLLGHGSNVSHWIPKRI-AGPLE 383

Query: 322 GIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVC 381
           G+ +  V+ G  H   + S+G ++T+G G  G LGHGD  + + P  + SL     + V 
Sbjct: 384 GLQIAFVACGPWHTALITSTGQLFTFGDGTFGVLGHGDRQNVSYPREVESLLGLRTIAVA 443

Query: 382 ARKRKTFVLVD-----------TGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAH 430
                T  +V+           +G ++ +G      LG  D+   +  L+P  + +L  +
Sbjct: 444 CGVWHTAAVVEVIATHSGTSISSGKLFTWGDGDKNRLGHGDK---EARLKPTCVSALIDY 500

Query: 431 HVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG---CLEPTEIFIQEMEE 483
           +  +I+ G   TV +T  GR+F  G     QLG     G   CL   +I  + +EE
Sbjct: 501 NFHKIACGHSLTVGLTTSGRVFTMGSTVYGQLGSSLSDGKVPCLVGDKIAGESIEE 556


>gi|440907021|gb|ELR57214.1| Putative E3 ubiquitin-protein ligase HERC1, partial [Bos grunniens
            mutus]
          Length = 4874

 Score =  127 bits (319), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 103/346 (29%), Positives = 168/346 (48%), Gaps = 21/346 (6%)

Query: 115  QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQV---SA 170
            Q+  G+  T +I +N +V +CG    G LG G      V  T I+      V Q+     
Sbjct: 4033 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHV-LTVISALQGFVVTQLVTSCG 4091

Query: 171  SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
            S+ H+  + +SG+VF+ GD      GH +++R   RPR +EAL+G    Q++ G   +  
Sbjct: 4092 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQMSCGFKHSAV 4150

Query: 231  LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSV-------VQIAAGPSYM 281
            +T  G + T G+  +G+LG G+T ++  P+ +  LE  ++G         +Q+A G ++ 
Sbjct: 4151 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQARNNTLFFLQVACGLNHT 4210

Query: 282  LAVTGNG-VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 340
            LAV+ +G +V++FG G    LG G    +  P+ +      GI + +V+ G +  VAL  
Sbjct: 4211 LAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVL--CGIGIKKVACGTQFSVALTK 4268

Query: 341  SGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 400
             G+VYT+G+     L  G   +   P+ +  L   +   V      T  L  TG VY +G
Sbjct: 4269 DGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWG 4328

Query: 401  WMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT 446
                G LG    G ++ V  P ++  L+  +V QIS G  H+   T
Sbjct: 4329 SNSEGQLGL---GHTNHVREPTLVTVLQGKNVRQISAGRCHSAAWT 4371



 Score =  111 bits (278), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 108/380 (28%), Positives = 168/380 (44%), Gaps = 31/380 (8%)

Query: 96  FLQSVEHSSDIVETSAGNMQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSF 154
           F +    +SD   T A    I TG   T ++S +  V+  GS+    L  G   TQ    
Sbjct: 338 FEEVCRMASDYSRTCASPDSIQTG--DTPIVSETCEVYVWGSNSSHQLVEG---TQEKIL 392

Query: 155 TRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTN------RPIFRPR 208
                PS +    + A +     +   G V  CG  S    G  D+N      +  F P 
Sbjct: 393 QPKLAPSFSDAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPH 452

Query: 209 LVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEV 268
              ++K V   + + G   T   T  G V + G   +G+LGHG++  +  PK I    + 
Sbjct: 453 --RSIKKVSSSKGSDG--HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQG 508

Query: 269 GSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRV 328
             VV ++AG  +  AVT +G +Y++G G    LGHG+ +     R I T  +   +V  V
Sbjct: 509 KVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNS----RNIPTLVKDISNVGEV 564

Query: 329 SAGDEHVVALDSSGY-VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKT 387
           S G  H +AL   G  V+++G G  G LGHGD      P+ + +L+     +VCA  + +
Sbjct: 565 SCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSS 624

Query: 388 FVLVDTGSVYGFG---WMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV 444
             L  TG VY +G    +G GS            LRP++++ L A  +  IS G  H + 
Sbjct: 625 LALTSTGQVYAWGCGACLGCGS-------SEATALRPKLIEELAATRIVDISIGDSHCLA 677

Query: 445 VTDRGRLFGFGDNERAQLGH 464
           ++    ++ +G+N   Q G 
Sbjct: 678 LSHDNEVYAWGNNSMGQCGQ 697



 Score = 94.7 bits (234), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 87/332 (26%), Positives = 150/332 (45%), Gaps = 19/332 (5%)

Query: 160  PSAAHVVQVSASENHAAFVLQS-GQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPC 218
            PS +   QV   +N   FV+Q+ G V  CG+ S    G  +++  +    ++ AL+G   
Sbjct: 4026 PSFSQAQQVICGQN-CTFVIQANGTVLACGEGSYGRLGQGNSDD-LHVLTVISALQGFVV 4083

Query: 219  KQVTAGLNFTGF---LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA 275
             Q+       G    LT  G V + G   +G+LGHG++  +  P+ I  L+    VVQ++
Sbjct: 4084 TQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQG-EEVVQMS 4142

Query: 276  AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTF--------RRKGIHVVR 327
             G  +   VT +G +++FG+G    LG G   ++  P  +           R   +  ++
Sbjct: 4143 CGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQARNNTLFFLQ 4202

Query: 328  VSAGDEHVVALDSSG-YVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRK 386
            V+ G  H +A+ + G  V+ +G G  G LG G+   K+ P+ +  L      +V    + 
Sbjct: 4203 VACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQF 4262

Query: 387  TFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT 446
            +  L   G VY FG      +G P+ G +    RP+ +  L    +  ++ G  HT+ + 
Sbjct: 4263 SVALTKDGHVYTFGQDRL--IGLPE-GRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALA 4319

Query: 447  DRGRLFGFGDNERAQLGHDTLRGCLEPTEIFI 478
              G ++ +G N   QLG        EPT + +
Sbjct: 4320 STGDVYAWGSNSEGQLGLGHTNHVREPTLVTV 4351



 Score = 76.6 bits (187), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 68/240 (28%), Positives = 108/240 (45%), Gaps = 21/240 (8%)

Query: 237  VHTCGSNTHGQLGH-GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 295
            V+  G+  HGQL   G  +  P   + AP        Q+  G +    +  NG V + G 
Sbjct: 4001 VYLWGAGRHGQLAEAGRNVMVP---AAAP--SFSQAQQVICGQNCTFVIQANGTVLACGE 4055

Query: 296  GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG-DEHVVALDSSGYVYTWGKGYCGA 354
            GS   LG G   D      I   +   +  +  S G D H +AL  SG V++WG G  G 
Sbjct: 4056 GSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGK 4115

Query: 355  LGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGV 414
            LGHG+   +  P  + +L+    VQ+    + + V+   G ++ FG   +G LG  +   
Sbjct: 4116 LGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN--T 4173

Query: 415  SDKVLRPRILDSLRAHHVS----------QISTGLYHTVVVTDRGRL-FGFGDNERAQLG 463
            S+K L P  + +L  + +           Q++ GL HT+ V+  G + + FGD +  +LG
Sbjct: 4174 SNKKL-PERVTALEGYQIGQARNNTLFFLQVACGLNHTLAVSADGSMVWAFGDGDYGKLG 4232



 Score = 49.3 bits (116), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 41/143 (28%), Positives = 67/143 (46%), Gaps = 9/143 (6%)

Query: 344  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 403
            VY WG G  G L    E  + +  P ++     A QV   +  TFV+   G+V   G   
Sbjct: 4001 VYLWGAGRHGQLA---EAGRNVMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGS 4057

Query: 404  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLY---HTVVVTDRGRLFGFGDNERA 460
            +G LG   +G SD +    ++ +L+   V+Q+ T      H++ +T+ G +F +GD +  
Sbjct: 4058 YGRLG---QGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYG 4114

Query: 461  QLGHDTLRGCLEPTEIFIQEMEE 483
            +LGH        P +I   + EE
Sbjct: 4115 KLGHGNSDRQRRPRQIEALQGEE 4137



 Score = 48.9 bits (115), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 28/100 (28%), Positives = 48/100 (48%), Gaps = 2/100 (2%)

Query: 125 LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQV 184
           L S   V++ G   C  LG G      +    I   +A  +V +S  ++H   +    +V
Sbjct: 627 LTSTGQVYAWGCGAC--LGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEV 684

Query: 185 FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           +  G+NS   CG  ++  PI +P+ V  L G+  +Q++AG
Sbjct: 685 YAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAG 724


>gi|395820632|ref|XP_003783667.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 [Otolemur
           garnettii]
          Length = 1049

 Score =  127 bits (319), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 90/276 (32%), Positives = 142/276 (51%), Gaps = 10/276 (3%)

Query: 204 IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 263
           +  PR  +       + V  GL  T F+   G V+TCG N  GQLGH  +  R  P+ + 
Sbjct: 22  VLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKS--RKKPEQVV 79

Query: 264 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH-GEQHDELQPRAIQTFRRKG 322
            L+   ++V ++ G ++ LA+   G VY++G  S+  LG  G +     PR I++     
Sbjct: 80  ALD-AQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSL--SD 136

Query: 323 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK-TLPEPLSSLKSHLAVQVC 381
           I +V+V+ G  H +AL  +  V+ WG+   G LG G +  K T P+ + SL     +QV 
Sbjct: 137 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGLDCKKQTSPQLIKSLVGIPFMQVA 196

Query: 382 ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYH 441
           A    +FVL  +G+++G+G   FG LG  D   +D+ + P +L SLR+  +  I  G  H
Sbjct: 197 AGGAHSFVLTLSGAIFGWGRNKFGQLGLNDE--NDRYV-PNLLKSLRSQKIVYICCGEDH 253

Query: 442 TVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF 477
           T  +T  G +F FG     QLGH++    + P ++F
Sbjct: 254 TAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVF 289



 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 105/333 (31%), Positives = 154/333 (46%), Gaps = 13/333 (3%)

Query: 135 GSSLCGVLGHGPETTQCVSFTRI-NFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSF 193
           G++  G LG G    + V   R  +F     V  V     H  FVL  G V+TCG N   
Sbjct: 5   GNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLG 64

Query: 194 CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGH-GD 252
             GH  + +   +P  V AL       V+ G   T  L  +G V+  G ++ GQLG  G 
Sbjct: 65  QLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGS 121

Query: 253 TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHG-EQHDELQ 311
                 P++I  L ++  +VQ+A G  + LA++    V+ +G      LG G +   +  
Sbjct: 122 EECIRVPRNIKSLSDI-QIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGLDCKKQTS 180

Query: 312 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSS 371
           P+ I++    GI  ++V+AG  H   L  SG ++ WG+   G LG  DE D+ +P  L S
Sbjct: 181 PQLIKSLV--GIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKS 238

Query: 372 LKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHH 431
           L+S   V +C  +  T  L   G V+ FG  G+G LG      +   + PR +  L    
Sbjct: 239 LRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG---HNSTSHEINPRKVFELMGSI 295

Query: 432 VSQISTGLYHT-VVVTDRGRLFGFGDNERAQLG 463
           V+QI+ G  HT   V   GR++ FG     QLG
Sbjct: 296 VTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 80/291 (27%), Positives = 138/291 (47%), Gaps = 8/291 (2%)

Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 179
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V VS  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVSCGEAHTLALN 100

Query: 180 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 239
             GQV+  G +S    G   +   I  PR +++L  +   QV  G   +  L+    V  
Sbjct: 101 DKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFC 160

Query: 240 CGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
            G N +GQLG G D   + +P+ I  L  +   +Q+AAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKYGQLGLGLDCKKQTSPQLIKSLVGI-PFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 299 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 358
             LG  +++D   P  +++ R + I  V +  G++H  AL   G V+T+G G  G LGH 
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRSQKI--VYICCGEDHTAALTKEGGVFTFGAGGYGQLGHN 277

Query: 359 DEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLG 408
               +  P  +  L   +  Q+ C R+  +  +  +G +Y FG  G G LG
Sbjct: 278 STSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 84/274 (30%), Positives = 132/274 (48%), Gaps = 10/274 (3%)

Query: 98  QSVEHSSDIVETSAGNM-QITTGRYHTLLISNS-SVFSCGSSLCGVLGH-GPETTQCVSF 154
           +S +    +V   A N+  ++ G  HTL +++   V++ G    G LG  G E  +C+  
Sbjct: 70  KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSE--ECIRV 127

Query: 155 TR-INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEAL 213
            R I   S   +VQV+    H+  + ++ +VF  G N     G     +    P+L+++L
Sbjct: 128 PRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGLDCKKQTSPQLIKSL 187

Query: 214 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
            G+P  QV AG   +  LT+ G +   G N  GQLG  D  DR  P  +  L     +V 
Sbjct: 188 VGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRS-QKIVY 246

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           I  G  +  A+T  G V++FG+G    LGH     E+ PR +  F   G  V +++ G +
Sbjct: 247 ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQ 304

Query: 334 HVVA-LDSSGYVYTWGKGYCGALGHGDEIDKTLP 366
           H  A + SSG +Y++G G  G LG G   ++  P
Sbjct: 305 HTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 77/251 (30%), Positives = 119/251 (47%), Gaps = 17/251 (6%)

Query: 70  IYA-GMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLISN 128
           +YA G+  + Q+ LL       +  +R  ++++  SDI       +Q+  G YH+L +S 
Sbjct: 105 VYAWGLDSDGQLGLLGS-----EECIRVPRNIKSLSDI-----QIVQVACGYYHSLALSK 154

Query: 129 SS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTC 187
           +S VF  G +  G LG G +  +  S   I        +QV+A   H+  +  SG +F  
Sbjct: 155 ASEVFCWGQNKYGQLGLGLDCKKQTSPQLIKSLVGIPFMQVAAGGAHSFVLTLSGAIFGW 214

Query: 188 GDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQ 247
           G N     G  D N   + P L+++L+      +  G + T  LT  G V T G+  +GQ
Sbjct: 215 GRNKFGQLGLNDENDR-YVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQ 273

Query: 248 LGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVVYSFGSGSNFCLGHGE 305
           LGH  T     P+ +   E +GS+V QIA G  +  A V  +G +YSFG G N  LG G 
Sbjct: 274 LGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGS 331

Query: 306 QHDELQPRAIQ 316
             +   P  ++
Sbjct: 332 TSNRKSPFTVK 342


>gi|334314433|ref|XP_003340037.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Monodelphis
            domestica]
          Length = 4790

 Score =  127 bits (319), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 101/339 (29%), Positives = 167/339 (49%), Gaps = 17/339 (5%)

Query: 115  QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQV---SA 170
            Q+  G+  T +I +N +V +CG    G LG G      V  T I+      V Q+     
Sbjct: 3960 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHV-LTVISALQGFVVTQLVTSCG 4018

Query: 171  SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
            S+ H+  + +SG+VF+ GD      GH +++R   RPR +EAL+G    Q++ G   +  
Sbjct: 4019 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVIQMSCGFKHSAV 4077

Query: 231  LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSVVQIAAGPSYMLAVTGNG 288
            +T  G + T G+  +G+LG G+T ++  P+ +  LE  ++G   Q+A G ++ LAV+ +G
Sbjct: 4078 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIG---QVACGLNHTLAVSADG 4134

Query: 289  -VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 347
             +V++FG G    LG G    +  P+ +      GI + +V+ G +  VAL   G+VYT+
Sbjct: 4135 SMVWAFGDGDYGKLGLGNSTAKSSPQKVDVL--CGIGIKKVACGTQFSVALTKDGHVYTF 4192

Query: 348  GKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSL 407
            G+     L  G   +   P+ +  L   +   +      T  L  TG VY +G    G L
Sbjct: 4193 GQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDIAVGAEHTLALASTGDVYAWGSNSEGQL 4252

Query: 408  GFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT 446
            G    G ++ V  P ++  L+  ++ QIS G  H+   T
Sbjct: 4253 GL---GHTNHVREPTLITILQGKNIRQISAGRCHSAAWT 4288



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 91/315 (28%), Positives = 144/315 (45%), Gaps = 25/315 (7%)

Query: 160 PSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTN------RPIFRPRLVEAL 213
           PS +    + A +     +   G V  CG  S    G  D+N      +  F P    ++
Sbjct: 400 PSFSDAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPH--RSI 457

Query: 214 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
           K V   + + G   T   T  G V + G   +G+LGHG++  +  PK I    +   VV 
Sbjct: 458 KKVSSSKGSDG--HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVC 515

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           ++AG  +  AVT +G +Y++G G    LGHG+ +     R I T  +   +V  VS G  
Sbjct: 516 VSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNS----RNIPTLVKDISNVGEVSCGSS 571

Query: 334 HVVALDSSGY-VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVD 392
           H +AL   G  V+++G G  G LGHGD      P+ + +L+     +VCA  + +  L  
Sbjct: 572 HTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTS 631

Query: 393 TGSVYGFG---WMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRG 449
           TG VY +G    +G GS            LRP++++ L A  +  IS G  H + ++   
Sbjct: 632 TGQVYAWGCGACLGCGS-------SEATALRPKLIEELAATRIVDISIGDSHCLALSHDN 684

Query: 450 RLFGFGDNERAQLGH 464
            ++ +G+N   Q G 
Sbjct: 685 EVYAWGNNSMGQCGQ 699



 Score = 98.6 bits (244), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 89/324 (27%), Positives = 150/324 (46%), Gaps = 13/324 (4%)

Query: 160  PSAAHVVQVSASENHAAFVLQS-GQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPC 218
            PS +   QV   +N   FV+Q+ G V  CG+ S    G  +++  +    ++ AL+G   
Sbjct: 3953 PSFSQAQQVICGQN-CTFVIQANGTVLACGEGSYGRLGQGNSDD-LHVLTVISALQGFVV 4010

Query: 219  KQVTAGLNFTGF---LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA 275
             Q+       G    LT  G V + G   +G+LGHG++  +  P+ I  L+    V+Q++
Sbjct: 4011 TQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQG-EEVIQMS 4069

Query: 276  AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHV 335
             G  +   VT +G +++FG+G    LG G   ++  P  +     +G  + +V+ G  H 
Sbjct: 4070 CGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTAL--EGYQIGQVACGLNHT 4127

Query: 336  VALDSSG-YVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 394
            +A+ + G  V+ +G G  G LG G+   K+ P+ +  L      +V    + +  L   G
Sbjct: 4128 LAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDG 4187

Query: 395  SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 454
             VY FG      +G P+ G +    RP+ +  L    +  I+ G  HT+ +   G ++ +
Sbjct: 4188 HVYTFGQDRL--IGLPE-GRARNHNRPQQIPVLAGVVIEDIAVGAEHTLALASTGDVYAW 4244

Query: 455  GDNERAQLGHDTLRGCLEPTEIFI 478
            G N   QLG        EPT I I
Sbjct: 4245 GSNSEGQLGLGHTNHVREPTLITI 4268



 Score = 98.2 bits (243), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 92/267 (34%), Positives = 130/267 (48%), Gaps = 16/267 (5%)

Query: 122 HTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ-VSASENHAAFVL 179
           HTL   +   VFS G    G LGHG  +TQ      I  P    VV  VSA   H+A V 
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYP-KLIQGPLQGKVVVCVSAGYRHSAAVT 527

Query: 180 QSGQVFTCGDNSSFCCGHRDTN-RPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH-V 237
           + G+++T G+      GH D+N R I  P LV+ +  V   +V+ G + T  L+  G  V
Sbjct: 528 EDGELYTWGEGDFGRLGHGDSNSRNI--PTLVKDISNV--GEVSCGSSHTIALSKDGRTV 583

Query: 238 HTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 297
            + G   +G+LGHGDT     PK I  L+ +  + ++ AG    LA+T  G VY++G G+
Sbjct: 584 WSFGGGDNGKLGHGDTNRVYKPKVIEALQGM-FIRKVCAGSQSSLALTSTGQVYAWGCGA 642

Query: 298 NFCLGHG-EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 356
             CLG G  +   L+P+ I+        +V +S GD H +AL     VY WG    G  G
Sbjct: 643 --CLGCGSSEATALRPKLIEEL--AATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCG 698

Query: 357 HGDEIDK-TLPEPLSSLKSHLAVQVCA 382
            G+     T P+ +S L      Q+ A
Sbjct: 699 QGNSTGPITKPKKVSGLDGVAIQQISA 725



 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 67/230 (29%), Positives = 108/230 (46%), Gaps = 11/230 (4%)

Query: 237  VHTCGSNTHGQLGH-GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 295
            V+  G+  HGQL   G  +  P   + AP        Q+  G +    +  NG V + G 
Sbjct: 3928 VYLWGAGRHGQLAEAGRNVMIP---AAAP--SFSQAQQVICGQNCTFVIQANGTVLACGE 3982

Query: 296  GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG-DEHVVALDSSGYVYTWGKGYCGA 354
            GS   LG G   D      I   +   +  +  S G D H +AL  SG V++WG G  G 
Sbjct: 3983 GSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGK 4042

Query: 355  LGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGV 414
            LGHG+   +  P  + +L+    +Q+    + + V+   G ++ FG   +G LG  +   
Sbjct: 4043 LGHGNSDRQRRPRQIEALQGEEVIQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN--T 4100

Query: 415  SDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRL-FGFGDNERAQLG 463
            S+K L P  + +L  + + Q++ GL HT+ V+  G + + FGD +  +LG
Sbjct: 4101 SNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLG 4149



 Score = 60.1 bits (144), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 49/180 (27%), Positives = 82/180 (45%), Gaps = 13/180 (7%)

Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 349
           VY +GS S+  L  G Q   LQP+   +F         + AG      + + G V   GK
Sbjct: 374 VYVWGSNSSHQLVEGTQEKILQPKLAPSFS----DAQTIEAGQYCTFVISTDGSVRACGK 429

Query: 350 GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKR----KTFVLVDTGSVYGFGWMGFG 405
           G  G LG GD  +++  + L + + H +++  +  +     T      G V+ +G   +G
Sbjct: 430 GSYGRLGLGDSNNQSTLKKL-TFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYG 488

Query: 406 SLGFPDRGVSDKVLRPRILD-SLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 464
            LG    G S     P+++   L+   V  +S G  H+  VT+ G L+ +G+ +  +LGH
Sbjct: 489 KLG---HGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGH 545



 Score = 49.3 bits (116), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 29/100 (29%), Positives = 48/100 (48%), Gaps = 2/100 (2%)

Query: 125 LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQV 184
           L S   V++ G   C  LG G      +    I   +A  +V +S  ++H   +    +V
Sbjct: 629 LTSTGQVYAWGCGAC--LGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEV 686

Query: 185 FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           +  G+NS   CG  ++  PI +P+ V  L GV  +Q++AG
Sbjct: 687 YAWGNNSMGQCGQGNSTGPITKPKKVSGLDGVAIQQISAG 726



 Score = 48.9 bits (115), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 41/143 (28%), Positives = 67/143 (46%), Gaps = 9/143 (6%)

Query: 344  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 403
            VY WG G  G L    E  + +  P ++     A QV   +  TFV+   G+V   G   
Sbjct: 3928 VYLWGAGRHGQLA---EAGRNVMIPAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGS 3984

Query: 404  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLY---HTVVVTDRGRLFGFGDNERA 460
            +G LG   +G SD +    ++ +L+   V+Q+ T      H++ +T+ G +F +GD +  
Sbjct: 3985 YGRLG---QGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYG 4041

Query: 461  QLGHDTLRGCLEPTEIFIQEMEE 483
            +LGH        P +I   + EE
Sbjct: 4042 KLGHGNSDRQRRPRQIEALQGEE 4064


>gi|387019663|gb|AFJ51949.1| putative E3 ubiquitin-protein ligase HERC4-like [Crotalus
           adamanteus]
          Length = 1052

 Score =  127 bits (319), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 102/314 (32%), Positives = 145/314 (46%), Gaps = 12/314 (3%)

Query: 156 RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 215
           R +F     V  V     H  FVL  G V+TCG N     GH  + +   RP  V AL  
Sbjct: 27  RCSFFVNKKVQDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRK---RPEQVGALDA 83

Query: 216 VPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRP-TPKSIAPLEEVGSVVQI 274
                V+ G   T  L  +G V+  G    GQLG   T +    P++I  L ++  +VQ+
Sbjct: 84  QNIVTVSCGEAHTLALNDKGQVYAWGFAVDGQLGLSGTEEYTRVPRNIKSLSDI-QIVQV 142

Query: 275 AAGPSYMLAVTGNGVVYSFGSGSNFCLGHG-EQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           A G  + LA++    V+S+G      LG G E   +  P+ I++    GI   +++AG  
Sbjct: 143 ACGYFHSLALSKGSEVFSWGQNKYGQLGLGYEYKKQASPQIIKSLL--GIPFAQIAAGGA 200

Query: 334 HVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDT 393
           H   L  SG V+ WG+   G LG  DE D+ +P  L SL+S   V +   +  T  L   
Sbjct: 201 HSFVLTLSGAVFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYISCGEDHTAALTKE 260

Query: 394 GSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHT-VVVTDRGRLF 452
           G V+ FG  G+G LG      +   + PR +  L  + V+QI+ G  HT   V   GR++
Sbjct: 261 GGVFTFGAGGYGQLG---HNSTAHEINPRKVFELMGNIVTQIACGRQHTSAFVPSTGRIY 317

Query: 453 GFGDNERAQLGHDT 466
            FG     QLG  T
Sbjct: 318 SFGLGGNGQLGMGT 331



 Score =  127 bits (319), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 90/276 (32%), Positives = 139/276 (50%), Gaps = 10/276 (3%)

Query: 204 IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 263
           +  PR          + V  GL  T F+   G V+TCG N  GQLGH  +  R  P+ + 
Sbjct: 22  VLEPRRCSFFVNKKVQDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKS--RKRPEQVG 79

Query: 264 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLG-HGEQHDELQPRAIQTFRRKG 322
            L+   ++V ++ G ++ LA+   G VY++G   +  LG  G +     PR I++     
Sbjct: 80  ALD-AQNIVTVSCGEAHTLALNDKGQVYAWGFAVDGQLGLSGTEEYTRVPRNIKSL--SD 136

Query: 323 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTL-PEPLSSLKSHLAVQVC 381
           I +V+V+ G  H +AL     V++WG+   G LG G E  K   P+ + SL      Q+ 
Sbjct: 137 IQIVQVACGYFHSLALSKGSEVFSWGQNKYGQLGLGYEYKKQASPQIIKSLLGIPFAQIA 196

Query: 382 ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYH 441
           A    +FVL  +G+V+G+G   FG LG  D   +D+ + P +L SLR+  +  IS G  H
Sbjct: 197 AGGAHSFVLTLSGAVFGWGRNKFGQLGLNDE--NDRYV-PNLLKSLRSQKIVYISCGEDH 253

Query: 442 TVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF 477
           T  +T  G +F FG     QLGH++    + P ++F
Sbjct: 254 TAALTKEGGVFTFGAGGYGQLGHNSTAHEINPRKVF 289



 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 82/291 (28%), Positives = 137/291 (47%), Gaps = 8/291 (2%)

Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 179
           R+   ++ + +V++CG +  G LGH     +     ++    A ++V VS  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKRP---EQVGALDAQNIVTVSCGEAHTLALN 100

Query: 180 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 239
             GQV+  G       G   T      PR +++L  +   QV  G   +  L+    V +
Sbjct: 101 DKGQVYAWGFAVDGQLGLSGTEEYTRVPRNIKSLSDIQIVQVACGYFHSLALSKGSEVFS 160

Query: 240 CGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
            G N +GQLG G +   + +P+ I  L  +    QIAAG ++   +T +G V+ +G    
Sbjct: 161 WGQNKYGQLGLGYEYKKQASPQIIKSLLGI-PFAQIAAGGAHSFVLTLSGAVFGWGRNKF 219

Query: 299 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 358
             LG  +++D   P  +++ R + I  V +S G++H  AL   G V+T+G G  G LGH 
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRSQKI--VYISCGEDHTAALTKEGGVFTFGAGGYGQLGHN 277

Query: 359 DEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLG 408
               +  P  +  L  ++  Q+ C R+  +  +  TG +Y FG  G G LG
Sbjct: 278 STAHEINPRKVFELMGNIVTQIACGRQHTSAFVPSTGRIYSFGLGGNGQLG 328



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 78/258 (30%), Positives = 126/258 (48%), Gaps = 7/258 (2%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLG-HGPETTQCVSFTRINFPSAAHVVQVSASEN 173
           ++ G  HTL +++   V++ G ++ G LG  G E    V    I   S   +VQV+    
Sbjct: 89  VSCGEAHTLALNDKGQVYAWGFAVDGQLGLSGTEEYTRVP-RNIKSLSDIQIVQVACGYF 147

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
           H+  + +  +VF+ G N     G     +    P+++++L G+P  Q+ AG   +  LT+
Sbjct: 148 HSLALSKGSEVFSWGQNKYGQLGLGYEYKKQASPQIIKSLLGIPFAQIAAGGAHSFVLTL 207

Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
            G V   G N  GQLG  D  DR  P  +  L     +V I+ G  +  A+T  G V++F
Sbjct: 208 SGAVFGWGRNKFGQLGLNDENDRYVPNLLKSLRS-QKIVYISCGEDHTAALTKEGGVFTF 266

Query: 294 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA-LDSSGYVYTWGKGYC 352
           G+G    LGH     E+ PR +  F   G  V +++ G +H  A + S+G +Y++G G  
Sbjct: 267 GAGGYGQLGHNSTAHEINPRKV--FELMGNIVTQIACGRQHTSAFVPSTGRIYSFGLGGN 324

Query: 353 GALGHGDEIDKTLPEPLS 370
           G LG G   ++  P P+ 
Sbjct: 325 GQLGMGTTSNRKSPFPVK 342



 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 67/206 (32%), Positives = 98/206 (47%), Gaps = 6/206 (2%)

Query: 114 MQITTGRYHTLLISN-SSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +Q+  G +H+L +S  S VFS G +  G LG G E  +  S   I         Q++A  
Sbjct: 140 VQVACGYFHSLALSKGSEVFSWGQNKYGQLGLGYEYKKQASPQIIKSLLGIPFAQIAAGG 199

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            H+  +  SG VF  G N     G  D N   + P L+++L+      ++ G + T  LT
Sbjct: 200 AHSFVLTLSGAVFGWGRNKFGQLGLNDENDR-YVPNLLKSLRSQKIVYISCGEDHTAALT 258

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVV 290
             G V T G+  +GQLGH  T     P+ +   E +G++V QIA G  +  A V   G +
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTAHEINPRKV--FELMGNIVTQIACGRQHTSAFVPSTGRI 316

Query: 291 YSFGSGSNFCLGHGEQHDELQPRAIQ 316
           YSFG G N  LG G   +   P  ++
Sbjct: 317 YSFGLGGNGQLGMGTTSNRKSPFPVK 342


>gi|291402886|ref|XP_002718216.1| PREDICTED: hect domain and RCC1-like domain 1 [Oryctolagus cuniculus]
          Length = 4860

 Score =  127 bits (319), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 102/339 (30%), Positives = 167/339 (49%), Gaps = 17/339 (5%)

Query: 115  QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQV---SA 170
            Q+  G+  T +I +N +V +CG    G LG G      V  T I+      V Q+     
Sbjct: 4030 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHV-LTVISALQGFVVTQLVTSCG 4088

Query: 171  SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
            S+ H+  + +SG+VF+ GD      GH +++R   RPR +EAL+G    Q++ G   +  
Sbjct: 4089 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQMSCGFKHSAV 4147

Query: 231  LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSVVQIAAGPSYMLAVTGNG 288
            +T  G + T G+  +G+LG G+T ++  P+ +  LE  ++G   Q+A G ++ LAV+ +G
Sbjct: 4148 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIG---QVACGLNHTLAVSADG 4204

Query: 289  -VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 347
             +V++FG G    LG G    +  P+ +      GI + +V+ G +  VAL   G+VYT+
Sbjct: 4205 SMVWAFGDGDYGKLGLGNSTAKSSPQKVDVL--CGIGIKKVACGTQFSVALTKDGHVYTF 4262

Query: 348  GKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSL 407
            G+     L  G   +   P+ +  L   +   V      T  L  TG VY +G    G L
Sbjct: 4263 GQDRLIGLPEGRARNHNRPQQVPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQL 4322

Query: 408  GFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT 446
            G    G ++ V  P ++  L+  ++ QIS G  H+   T
Sbjct: 4323 GL---GHTNHVREPTLVTVLQGKNIRQISAGRCHSAAWT 4358



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 91/315 (28%), Positives = 144/315 (45%), Gaps = 25/315 (7%)

Query: 160 PSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTN------RPIFRPRLVEAL 213
           PS +    + A +     +   G V  CG  S    G  D+N      +  F P    ++
Sbjct: 400 PSFSDAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPH--RSI 457

Query: 214 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
           K V   + + G   T   T  G V + G   +G+LGHG++  +  PK I    +   VV 
Sbjct: 458 KKVSSSKGSDG--HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVC 515

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           ++AG  +  AVT +G +Y++G G    LGHG+ +     R I T  +   +V  VS G  
Sbjct: 516 VSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNS----RNIPTLVKDISNVGEVSCGSS 571

Query: 334 HVVALDSSGY-VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVD 392
           H +AL   G  V+++G G  G LGHGD      P+ + +L+     +VCA  + +  L  
Sbjct: 572 HTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTS 631

Query: 393 TGSVYGFG---WMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRG 449
           TG VY +G    +G GS            LRP++++ L A  +  IS G  H + ++   
Sbjct: 632 TGQVYAWGCGACLGCGS-------SEATALRPKLIEELAATRIVDISIGDSHCLALSHDN 684

Query: 450 RLFGFGDNERAQLGH 464
            ++ +G+N   Q G 
Sbjct: 685 EVYAWGNNSMGQCGQ 699



 Score = 98.2 bits (243), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 90/266 (33%), Positives = 128/266 (48%), Gaps = 14/266 (5%)

Query: 122 HTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
           HTL   +   VFS G    G LGHG  +TQ              VV VSA   H+A V +
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528

Query: 181 SGQVFTCGDNSSFCCGHRDTN-RPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH-VH 238
            G+++T G+      GH D+N R I  P LV+ +  V   +V+ G + T  L+  G  V 
Sbjct: 529 DGELYTWGEGDFGRLGHGDSNSRNI--PTLVKDISNV--GEVSCGSSHTIALSKDGRTVW 584

Query: 239 TCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
           + G   +G+LGHGDT     PK I  L+ +  + ++ AG    LA+T  G VY++G G+ 
Sbjct: 585 SFGGGDNGKLGHGDTNRVYKPKVIEALQGM-FIRKVCAGSQSSLALTSTGQVYAWGCGA- 642

Query: 299 FCLGHG-EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 357
            CLG G  +   L+P+ I+        +V +S GD H +AL     VY WG    G  G 
Sbjct: 643 -CLGCGSSEATALRPKLIEEL--AATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQ 699

Query: 358 GDEIDK-TLPEPLSSLKSHLAVQVCA 382
           G+     T P+ +S L      Q+ A
Sbjct: 700 GNSTGPITKPKKVSGLDGIAIQQISA 725



 Score = 96.3 bits (238), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 87/324 (26%), Positives = 150/324 (46%), Gaps = 13/324 (4%)

Query: 160  PSAAHVVQVSASENHAAFVLQS-GQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPC 218
            PS +   QV   +N   FV+Q+ G V  CG+ S    G  +++  +    ++ AL+G   
Sbjct: 4023 PSFSQAQQVICGQN-CTFVIQANGTVLACGEGSYGRLGQGNSDD-LHVLTVISALQGFVV 4080

Query: 219  KQVTAGLNFTGF---LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA 275
             Q+       G    LT  G V + G   +G+LGHG++  +  P+ I  L+    VVQ++
Sbjct: 4081 TQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQG-EEVVQMS 4139

Query: 276  AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHV 335
             G  +   VT +G +++FG+G    LG G   ++  P  +     +G  + +V+ G  H 
Sbjct: 4140 CGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTAL--EGYQIGQVACGLNHT 4197

Query: 336  VALDSSG-YVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 394
            +A+ + G  V+ +G G  G LG G+   K+ P+ +  L      +V    + +  L   G
Sbjct: 4198 LAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDG 4257

Query: 395  SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 454
             VY FG      +G P+ G +    RP+ +  L    +  ++ G  HT+ +   G ++ +
Sbjct: 4258 HVYTFGQDRL--IGLPE-GRARNHNRPQQVPVLAGVVIEDVAVGAEHTLALASTGDVYAW 4314

Query: 455  GDNERAQLGHDTLRGCLEPTEIFI 478
            G N   QLG        EPT + +
Sbjct: 4315 GSNSEGQLGLGHTNHVREPTLVTV 4338



 Score = 84.7 bits (208), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 68/230 (29%), Positives = 108/230 (46%), Gaps = 11/230 (4%)

Query: 237  VHTCGSNTHGQLGH-GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 295
            V+  G+  HGQL   G  +  P   + AP        Q+  G +    +  NG V + G 
Sbjct: 3998 VYLWGAGRHGQLAEAGRNVMVP---AAAP--SFSQAQQVICGQNCTFVIQANGTVLACGE 4052

Query: 296  GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG-DEHVVALDSSGYVYTWGKGYCGA 354
            GS   LG G   D      I   +   +  +  S G D H +AL  SG V++WG G  G 
Sbjct: 4053 GSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGK 4112

Query: 355  LGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGV 414
            LGHG+   +  P  + +L+    VQ+    + + V+   G ++ FG   +G LG  +   
Sbjct: 4113 LGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN--T 4170

Query: 415  SDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRL-FGFGDNERAQLG 463
            S+K L P  + +L  + + Q++ GL HT+ V+  G + + FGD +  +LG
Sbjct: 4171 SNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLG 4219



 Score = 59.7 bits (143), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 49/180 (27%), Positives = 82/180 (45%), Gaps = 13/180 (7%)

Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 349
           VY +GS S+  L  G Q   LQP+   +F         + AG      + + G V   GK
Sbjct: 374 VYVWGSNSSHQLVEGTQEKILQPKLAPSFS----DAQTIEAGQYCTFVISTDGSVRACGK 429

Query: 350 GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKR----KTFVLVDTGSVYGFGWMGFG 405
           G  G LG GD  +++  + L + + H +++  +  +     T      G V+ +G   +G
Sbjct: 430 GSYGRLGLGDSNNQSTLKKL-TFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYG 488

Query: 406 SLGFPDRGVSDKVLRPRILD-SLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 464
            LG    G S     P+++   L+   V  +S G  H+  VT+ G L+ +G+ +  +LGH
Sbjct: 489 KLG---HGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGH 545



 Score = 49.3 bits (116), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 41/143 (28%), Positives = 67/143 (46%), Gaps = 9/143 (6%)

Query: 344  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 403
            VY WG G  G L    E  + +  P ++     A QV   +  TFV+   G+V   G   
Sbjct: 3998 VYLWGAGRHGQLA---EAGRNVMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGS 4054

Query: 404  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLY---HTVVVTDRGRLFGFGDNERA 460
            +G LG   +G SD +    ++ +L+   V+Q+ T      H++ +T+ G +F +GD +  
Sbjct: 4055 YGRLG---QGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYG 4111

Query: 461  QLGHDTLRGCLEPTEIFIQEMEE 483
            +LGH        P +I   + EE
Sbjct: 4112 KLGHGNSDRQRRPRQIEALQGEE 4134



 Score = 48.9 bits (115), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 28/100 (28%), Positives = 48/100 (48%), Gaps = 2/100 (2%)

Query: 125 LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQV 184
           L S   V++ G   C  LG G      +    I   +A  +V +S  ++H   +    +V
Sbjct: 629 LTSTGQVYAWGCGAC--LGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEV 686

Query: 185 FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           +  G+NS   CG  ++  PI +P+ V  L G+  +Q++AG
Sbjct: 687 YAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAG 726


>gi|449522972|ref|XP_004168499.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like, partial [Cucumis
           sativus]
          Length = 806

 Score =  127 bits (318), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 90/308 (29%), Positives = 139/308 (45%), Gaps = 23/308 (7%)

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
           HA  V + G++F+ G+ S    GH      +  P++++ L G   + V  G   T  +T+
Sbjct: 301 HAVLVTRQGEIFSWGEESGGRLGH-GVEADVSHPKIIDTLSGTNVELVACGEYHTCAVTL 359

Query: 234 RGHVHTCGSNTH--GQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
            G ++T G  TH  G LGHG  +    P+ ++   E   V  I+ G  +   VT  G ++
Sbjct: 360 SGDLYTWGDGTHNYGLLGHGSEVSHWIPQKVSGQMEGIRVSYISCGAWHTAVVTSAGQLF 419

Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL------------- 338
           +FG GS   LGHG+      PR ++T R  G+   +V+ G  H  A              
Sbjct: 420 TFGDGSFGALGHGDHITSNFPREVETLR--GLRTTKVACGVWHTAAAVEAINELSDSGTS 477

Query: 339 --DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSV 396
              SS  +YTWG G  G LGHGD   + +PE +++L      QV      T  L   G V
Sbjct: 478 ASPSSRKLYTWGDGDKGRLGHGDNEPRLVPECVAALMEERICQVACGNDLTVALTTAGRV 537

Query: 397 YGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGD 456
           Y  G   +G LG      ++  L   +   +    V +++ G YH  V+T +  ++ +G 
Sbjct: 538 YTMGSTAYGQLG---SATANGKLPTCVEGEIANSFVEEVACGSYHVAVLTSKNEVYTWGK 594

Query: 457 NERAQLGH 464
               QLGH
Sbjct: 595 GLNGQLGH 602



 Score =  108 bits (270), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 97/310 (31%), Positives = 135/310 (43%), Gaps = 23/310 (7%)

Query: 100 VEHSSDIVETSAGNMQ-ITTGRYHTLLISNSS---VFSCGSSLCGVLGHGPETTQCVSFT 155
           V H   I   S  N++ +  G YHT  ++ S     +  G+   G+LGHG E +  +   
Sbjct: 330 VSHPKIIDTLSGTNVELVACGEYHTCAVTLSGDLYTWGDGTHNYGLLGHGSEVSHWIPQK 389

Query: 156 RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 215
                    V  +S    H A V  +GQ+FT GD S    GH D     F PR VE L+G
Sbjct: 390 VSGQMEGIRVSYISCGAWHTAVVTSAGQLFTFGDGSFGALGHGDHITSNF-PREVETLRG 448

Query: 216 VPCKQVTAGLNFTGF-------LTIRG--------HVHTCGSNTHGQLGHGDTLDRPTPK 260
           +   +V  G+  T         L+  G         ++T G    G+LGHGD   R  P+
Sbjct: 449 LRTTKVACGVWHTAAAVEAINELSDSGTSASPSSRKLYTWGDGDKGRLGHGDNEPRLVPE 508

Query: 261 SIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRR 320
            +A L E   + Q+A G    +A+T  G VY+ GS +   LG    + +L P  ++    
Sbjct: 509 CVAALMEE-RICQVACGNDLTVALTTAGRVYTMGSTAYGQLGSATANGKL-PTCVEGEIA 566

Query: 321 KGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQV 380
               V  V+ G  HV  L S   VYTWGKG  G LGHGD   +  P  +  LK      V
Sbjct: 567 NSF-VEEVACGSYHVAVLTSKNEVYTWGKGLNGQLGHGDNNHRNTPTIVDVLKDKQVKNV 625

Query: 381 CARKRKTFVL 390
               + T V+
Sbjct: 626 ACGSKFTVVI 635



 Score = 95.5 bits (236), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 84/298 (28%), Positives = 137/298 (45%), Gaps = 28/298 (9%)

Query: 207 PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 266
           P+ +E+   +    +  G      +T +G + + G  + G+LGHG   D   PK I  L 
Sbjct: 281 PKALESTVVLDVHGIACGGRHAVLVTRQGEIFSWGEESGGRLGHGVEADVSHPKIIDTLS 340

Query: 267 EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS-NF-CLGHGEQHDELQPRAIQTFRRKGIH 324
              +V  +A G  +  AVT +G +Y++G G+ N+  LGHG +     P+ + + + +GI 
Sbjct: 341 GT-NVELVACGEYHTCAVTLSGDLYTWGDGTHNYGLLGHGSEVSHWIPQKV-SGQMEGIR 398

Query: 325 VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARK 384
           V  +S G  H   + S+G ++T+G G  GALGHGD I    P  + +L+     +V    
Sbjct: 399 VSYISCGAWHTAVVTSAGQLFTFGDGSFGALGHGDHITSNFPREVETLRGLRTTKVACGV 458

Query: 385 RKTFVLV-------DTGS--------VYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRA 429
             T   V       D+G+        +Y +G    G LG  D   ++  L P  + +L  
Sbjct: 459 WHTAAAVEAINELSDSGTSASPSSRKLYTWGDGDKGRLGHGD---NEPRLVPECVAALME 515

Query: 430 HHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCL------EPTEIFIQEM 481
             + Q++ G   TV +T  GR++  G     QLG  T  G L      E    F++E+
Sbjct: 516 ERICQVACGNDLTVALTTAGRVYTMGSTAYGQLGSATANGKLPTCVEGEIANSFVEEV 573



 Score = 92.4 bits (228), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 77/248 (31%), Positives = 119/248 (47%), Gaps = 25/248 (10%)

Query: 254 LDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPR 313
           LD   PK++     V  V  IA G  + + VT  G ++S+G  S   LGHG + D   P+
Sbjct: 276 LDALLPKALESTV-VLDVHGIACGGRHAVLVTRQGEIFSWGEESGGRLGHGVEADVSHPK 334

Query: 314 AIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY--CGALGHGDEIDKTLPEPLSS 371
            I T    G +V  V+ G+ H  A+  SG +YTWG G    G LGHG E+   +P+ +S 
Sbjct: 335 IIDTL--SGTNVELVACGEYHTCAVTLSGDLYTWGDGTHNYGLLGHGSEVSHWIPQKVSG 392

Query: 372 LKSHLAVQ-VCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAH 430
               + V  +      T V+   G ++ FG   FG+LG  D   S+    PR +++LR  
Sbjct: 393 QMEGIRVSYISCGAWHTAVVTSAGQLFTFGDGSFGALGHGDHITSN---FPREVETLRGL 449

Query: 431 HVSQISTGLYHTVV-------VTDRG--------RLFGFGDNERAQLGHDTLRGCLEPTE 475
             ++++ G++HT         ++D G        +L+ +GD ++ +LGH      L P E
Sbjct: 450 RTTKVACGVWHTAAAVEAINELSDSGTSASPSSRKLYTWGDGDKGRLGHGDNEPRLVP-E 508

Query: 476 IFIQEMEE 483
                MEE
Sbjct: 509 CVAALMEE 516



 Score = 89.4 bits (220), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 91/345 (26%), Positives = 144/345 (41%), Gaps = 26/345 (7%)

Query: 119 GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSASENHAAF 177
           GR+  L+     +FS G    G LGHG E    VS  + I+  S  +V  V+  E H   
Sbjct: 299 GRHAVLVTRQGEIFSWGEESGGRLGHGVEAD--VSHPKIIDTLSGTNVELVACGEYHTCA 356

Query: 178 VLQSGQVFTCGDNSSF--CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRG 235
           V  SG ++T GD +      GH          ++   ++G+    ++ G   T  +T  G
Sbjct: 357 VTLSGDLYTWGDGTHNYGLLGHGSEVSHWIPQKVSGQMEGIRVSYISCGAWHTAVVTSAG 416

Query: 236 HVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS------VVQIAAGPSYMLAVTGNGV 289
            + T G  + G LGHGD +    P+ +  L  + +      V   AA    +  ++ +G 
Sbjct: 417 QLFTFGDGSFGALGHGDHITSNFPREVETLRGLRTTKVACGVWHTAAAVEAINELSDSGT 476

Query: 290 --------VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 341
                   +Y++G G    LGHG+    L P  +     +   + +V+ G++  VAL ++
Sbjct: 477 SASPSSRKLYTWGDGDKGRLGHGDNEPRLVPECVAALMEE--RICQVACGNDLTVALTTA 534

Query: 342 GYVYTWGKGYCGALGHGDEIDKTLPEPLS-SLKSHLAVQVCARKRKTFVLVDTGSVYGFG 400
           G VYT G    G LG      K LP  +   + +    +V        VL     VY +G
Sbjct: 535 GRVYTMGSTAYGQLGSATANGK-LPTCVEGEIANSFVEEVACGSYHVAVLTSKNEVYTWG 593

Query: 401 WMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVV 445
               G LG  D    +    P I+D L+   V  ++ G   TVV+
Sbjct: 594 KGLNGQLGHGDNNHRNT---PTIVDVLKDKQVKNVACGSKFTVVI 635


>gi|326673186|ref|XP_685685.5| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 [Danio rerio]
          Length = 1053

 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 100/324 (30%), Positives = 148/324 (45%), Gaps = 12/324 (3%)

Query: 156 RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 215
           R  F     V  V     H  F+L+ G V+TCG N     GH    +   +P  V +L  
Sbjct: 27  RCEFFEGKRVRDVGCGRRHTVFLLEDGTVYTCGCNDLGQLGHEKARK---KPEQVVSLDA 83

Query: 216 VPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLD-RPTPKSIAPLEEVGSVVQI 274
                V+ G   T  L  +G V   G  + GQLG     D    P+++  L EV  + Q+
Sbjct: 84  QNIVAVSCGEAHTLALNDKGQVFAWGLGSDGQLGLSIVEDCLRVPRTVKSLSEV-HITQV 142

Query: 275 AAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDEL-QPRAIQTFRRKGIHVVRVSAGDE 333
           A G  + LA+   G ++S+G      LG G+Q   +  P+ IQ+   +GI   ++SAG  
Sbjct: 143 ACGYWHSLALARGGEIFSWGQNKYGQLGLGQQGACVCSPQVIQSL--QGIPFGQISAGGA 200

Query: 334 HVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDT 393
           H   L  SG ++ WG+   G LG GD  D+  P  L +L+S   V +C  +  T  L   
Sbjct: 201 HSFGLTLSGAIFGWGRNKFGQLGLGDNDDRRFPVLLKTLRSQQVVYICCGEDHTAALTKE 260

Query: 394 GSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV-VTDRGRLF 452
           G V+ FG  G+G LG      ++  + PR +  L    VSQI+ G  HT+  +   G++ 
Sbjct: 261 GGVFTFGAGGYGQLG---HNSTNHEVNPRKVFELMGSVVSQIACGRQHTLAFIPSSGKID 317

Query: 453 GFGDNERAQLGHDTLRGCLEPTEI 476
            FG     QLG  +    + PT +
Sbjct: 318 SFGLGGNGQLGTRSTCNRISPTPV 341



 Score =  125 bits (313), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 87/276 (31%), Positives = 140/276 (50%), Gaps = 10/276 (3%)

Query: 204 IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 263
           +  PR  E  +G   + V  G   T FL   G V+TCG N  GQLGH     R  P+ + 
Sbjct: 22  LLEPRRCEFFEGKRVRDVGCGRRHTVFLLEDGTVYTCGCNDLGQLGHEKA--RKKPEQVV 79

Query: 264 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQ-PRAIQTFRRKG 322
            L +  ++V ++ G ++ LA+   G V+++G GS+  LG     D L+ PR +++     
Sbjct: 80  SL-DAQNIVAVSCGEAHTLALNDKGQVFAWGLGSDGQLGLSIVEDCLRVPRTVKSLSE-- 136

Query: 323 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTL-PEPLSSLKSHLAVQVC 381
           +H+ +V+ G  H +AL   G +++WG+   G LG G +      P+ + SL+     Q+ 
Sbjct: 137 VHITQVACGYWHSLALARGGEIFSWGQNKYGQLGLGQQGACVCSPQVIQSLQGIPFGQIS 196

Query: 382 ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYH 441
           A    +F L  +G+++G+G   FG LG  D   +D    P +L +LR+  V  I  G  H
Sbjct: 197 AGGAHSFGLTLSGAIFGWGRNKFGQLGLGD---NDDRRFPVLLKTLRSQQVVYICCGEDH 253

Query: 442 TVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF 477
           T  +T  G +F FG     QLGH++    + P ++F
Sbjct: 254 TAALTKEGGVFTFGAGGYGQLGHNSTNHEVNPRKVF 289



 Score =  104 bits (260), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 95/320 (29%), Positives = 145/320 (45%), Gaps = 21/320 (6%)

Query: 119 GRYHTL-LISNSSVFSCGSSLCGVLGH-----GPETTQCVSFTRINFPSAAHVVQVSASE 172
           GR HT+ L+ + +V++CG +  G LGH      PE  Q VS        A ++V VS  E
Sbjct: 42  GRRHTVFLLEDGTVYTCGCNDLGQLGHEKARKKPE--QVVSL------DAQNIVAVSCGE 93

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            H   +   GQVF  G  S    G       +  PR V++L  V   QV  G   +  L 
Sbjct: 94  AHTLALNDKGQVFAWGLGSDGQLGLSIVEDCLRVPRTVKSLSEVHITQVACGYWHSLALA 153

Query: 233 IRGHVHTCGSNTHGQLGHGDT-LDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
             G + + G N +GQLG G       +P+ I  L+ +    QI+AG ++   +T +G ++
Sbjct: 154 RGGEIFSWGQNKYGQLGLGQQGACVCSPQVIQSLQGI-PFGQISAGGAHSFGLTLSGAIF 212

Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 351
            +G      LG G+  D   P  ++T R +   VV +  G++H  AL   G V+T+G G 
Sbjct: 213 GWGRNKFGQLGLGDNDDRRFPVLLKTLRSQ--QVVYICCGEDHTAALTKEGGVFTFGAGG 270

Query: 352 CGALGHGDEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLGFP 410
            G LGH     +  P  +  L   +  Q+ C R+     +  +G +  FG  G G LG  
Sbjct: 271 YGQLGHNSTNHEVNPRKVFELMGSVVSQIACGRQHTLAFIPSSGKIDSFGLGGNGQLG-- 328

Query: 411 DRGVSDKVLRPRILDSLRAH 430
            R   +++    +    RAH
Sbjct: 329 TRSTCNRISPTPVKGCWRAH 348


>gi|449499989|ref|XP_004174916.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein
           ligase HERC3-like [Taeniopygia guttata]
          Length = 1050

 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 97/303 (32%), Positives = 156/303 (51%), Gaps = 12/303 (3%)

Query: 164 HVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTA 223
           +V +V+   NH+ F+L+ G+V+TCG N+    GH        +P  + AL G     V  
Sbjct: 35  NVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHDCEGS---KPEQIGALAGQHIVHVAC 91

Query: 224 GLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPT-PKSIAPLEEVGSVVQIAAGPSYML 282
           G + +  L+ +G + + G+ + GQLG     D  T P+ I  L +  +++Q++ G  + L
Sbjct: 92  GESHSVALSDQGQLFSWGAGSDGQLGLTTIEDAVTVPRLIKKLNQ-QTILQVSCGNWHCL 150

Query: 283 AVTGNGVVYSFGSGSNFCLGHGEQ-HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 341
           A+  +G  +++G  S   LG G++   +  P+ +++    GI + +V+AG  H  AL  S
Sbjct: 151 ALAADGQFFTWGQNSYGQLGLGKECPSQASPQRVKSL--DGIPLAQVAAGGAHSFALSLS 208

Query: 342 GYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGW 401
           G V+ WGK   G LG  DE D+  P  +  L+S   V +   +  T VL  +G V+ FG 
Sbjct: 209 GAVFGWGKNSSGQLGLSDERDRESPCHVKLLRSQKVVYISCGEEHTAVLTKSGGVFTFGA 268

Query: 402 MGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV-VTDRGRLFGFGDNERA 460
              G LG     ++D+V  PR +  L    VSQI+ G +HT+  V   G ++ FG   R 
Sbjct: 269 GSCGQLG--HDSMNDEV-NPRRVLELMGSEVSQIACGRHHTLAFVPSSGMIYAFGCGTRG 325

Query: 461 QLG 463
           QLG
Sbjct: 326 QLG 328



 Score =  125 bits (314), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 95/301 (31%), Positives = 146/301 (48%), Gaps = 29/301 (9%)

Query: 193 FCCGHRDTNRP---------IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 243
            C G+    +P         I  P++   +     K+V  G N + FL   G V+TCG N
Sbjct: 2   LCWGYSSYGQPGIGSNLQVIIPEPQVYGFIHDRNVKEVACGGNHSVFLLEDGEVYTCGLN 61

Query: 244 THGQLGHGDTLDRPTPKSIAPLEEVGS-----VVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
           T GQLGH     +P        E++G+     +V +A G S+ +A++  G ++S+G+GS+
Sbjct: 62  TKGQLGHDCEGSKP--------EQIGALAGQHIVHVACGESHSVALSDQGQLFSWGAGSD 113

Query: 299 FCLGHGEQHDELQ-PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 357
             LG     D +  PR I+   ++ I  ++VS G+ H +AL + G  +TWG+   G LG 
Sbjct: 114 GQLGLTTIEDAVTVPRLIKKLNQQTI--LQVSCGNWHCLALAADGQFFTWGQNSYGQLGL 171

Query: 358 GDEI-DKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSD 416
           G E   +  P+ + SL      QV A    +F L  +G+V+G+G    G LG  D    +
Sbjct: 172 GKECPSQASPQRVKSLDGIPLAQVAAGGAHSFALSLSGAVFGWGKNSSGQLGLSDERDRE 231

Query: 417 KVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 476
               P  +  LR+  V  IS G  HT V+T  G +F FG     QLGHD++   + P  +
Sbjct: 232 S---PCHVKLLRSQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRV 288

Query: 477 F 477
            
Sbjct: 289 L 289



 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 89/309 (28%), Positives = 147/309 (47%), Gaps = 14/309 (4%)

Query: 102 HSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPS 161
           H  ++ E + G      G +   L+ +  V++CG +  G LGH  E ++     +I   +
Sbjct: 32  HDRNVKEVACG------GNHSVFLLEDGEVYTCGLNTKGQLGHDCEGSKP---EQIGALA 82

Query: 162 AAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQV 221
             H+V V+  E+H+  +   GQ+F+ G  S    G       +  PRL++ L      QV
Sbjct: 83  GQHIVHVACGESHSVALSDQGQLFSWGAGSDGQLGLTTIEDAVTVPRLIKKLNQQTILQV 142

Query: 222 TAGLNFTGFLTIRGHVHTCGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSY 280
           + G      L   G   T G N++GQLG G +   + +P+ +  L+ +  + Q+AAG ++
Sbjct: 143 SCGNWHCLALAADGQFFTWGQNSYGQLGLGKECPSQASPQRVKSLDGI-PLAQVAAGGAH 201

Query: 281 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 340
             A++ +G V+ +G  S+  LG  ++ D   P  ++  R +   VV +S G+EH   L  
Sbjct: 202 SFALSLSGAVFGWGKNSSGQLGLSDERDRESPCHVKLLRSQ--KVVYISCGEEHTAVLTK 259

Query: 341 SGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGF 399
           SG V+T+G G CG LGH    D+  P  +  L      Q+ C R      +  +G +Y F
Sbjct: 260 SGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVSQIACGRHHTLAFVPSSGMIYAF 319

Query: 400 GWMGFGSLG 408
           G    G LG
Sbjct: 320 GCGTRGQLG 328



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 83/266 (31%), Positives = 124/266 (46%), Gaps = 8/266 (3%)

Query: 114 MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           + +  G  H++ +S+   +FS G+   G LG             I   +   ++QVS   
Sbjct: 87  VHVACGESHSVALSDQGQLFSWGAGSDGQLGLTTIEDAVTVPRLIKKLNQQTILQVSCGN 146

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            H   +   GQ FT G NS    G          P+ V++L G+P  QV AG   +  L+
Sbjct: 147 WHCLALAADGQFFTWGQNSYGQLGLGKECPSQASPQRVKSLDGIPLAQVAAGGAHSFALS 206

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
           + G V   G N+ GQLG  D  DR +P  +  L     VV I+ G  +   +T +G V++
Sbjct: 207 LSGAVFGWGKNSSGQLGLSDERDRESPCHVKLLRS-QKVVYISCGEEHTAVLTKSGGVFT 265

Query: 293 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA-LDSSGYVYTWGKGY 351
           FG+GS   LGH   +DE+ PR +      G  V +++ G  H +A + SSG +Y +G G 
Sbjct: 266 FGAGSCGQLGHDSMNDEVNPRRV--LELMGSEVSQIACGRHHTLAFVPSSGMIYAFGCGT 323

Query: 352 CGALGHGDEIDKTLPEPLSSLKSHLA 377
            G LG G   +   P P   +K H A
Sbjct: 324 RGQLGTGHTCNVKCPSP---VKGHWA 346



 Score = 47.0 bits (110), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 39/144 (27%), Positives = 62/144 (43%), Gaps = 10/144 (6%)

Query: 347 WGKGYCGALGHGDEIDKTLPEPLSSLKSH---LAVQVCARKRKTFVLVDTGSVYGFGWMG 403
           WG    G  G G  +   +PEP      H   +    C      F+L D G VY  G   
Sbjct: 4   WGYSSYGQPGIGSNLQVIIPEPQVYGFIHDRNVKEVACGGNHSVFLLED-GEVYTCGLNT 62

Query: 404 FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 463
            G LG    G      +P  + +L   H+  ++ G  H+V ++D+G+LF +G     QLG
Sbjct: 63  KGQLGHDCEGS-----KPEQIGALAGQHIVHVACGESHSVALSDQGQLFSWGAGSDGQLG 117

Query: 464 HDTLRGCLEPTEIFIQEMEEDTGL 487
             T+   +    + I+++ + T L
Sbjct: 118 LTTIEDAVTVPRL-IKKLNQQTIL 140


>gi|242066354|ref|XP_002454466.1| hypothetical protein SORBIDRAFT_04g031600 [Sorghum bicolor]
 gi|241934297|gb|EES07442.1| hypothetical protein SORBIDRAFT_04g031600 [Sorghum bicolor]
          Length = 1003

 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 129/471 (27%), Positives = 207/471 (43%), Gaps = 39/471 (8%)

Query: 12  ELPSHLIFEILTSGRLSAVDLAHLELTSKTFGGSHGLYPQKF-RSLVDLAASQLCALHSI 70
           E  SH +  I  +G  S++DL H      +  GS  L   K+  S +D +          
Sbjct: 88  EKESHSLSVIYKNGE-SSLDLVH------SLYGSPRLIQNKYLHSNLDCSEPFFSPRQKA 140

Query: 71  YAGMS---RNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLIS 127
           ++ +      +  EL+NR   N    LR ++S E   D        ++ + G  +    S
Sbjct: 141 WSELDSYLEKISPELVNRVKNN----LRDIRSAETIKDQRIIQMPKLKQSEGS-NAATDS 195

Query: 128 NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ-VSASENHAAFVLQSGQVFT 186
              +F  G  L  +  HG      +S  R+   S    VQ ++  E HAA V + GQVF+
Sbjct: 196 LKDIFVWGDVLGRMSDHGHVPATNISLPRLLKSSQILNVQSIACGEKHAAIVTKQGQVFS 255

Query: 187 CGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHG 246
            G+ +    GH+ T+  +  P+++++L   P K +  G  +T  +++ G ++  G   H 
Sbjct: 256 WGEENGGRLGHK-TSDSVSDPKIIDSLASTPVKTIAFGAKYTCAVSVSGELYEWGEGIHS 314

Query: 247 QLGHGDTLDRPTP----KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLG 302
            LG G    + +P    K I+  + + SV++IA G  +   ++  G +Y++G G+   LG
Sbjct: 315 -LGFGKNQCQRSPWFPHKLISTSDGI-SVLKIACGQWHTAIISSLGKLYTYGYGTFGVLG 372

Query: 303 HGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA-------LDSS---GYVYTWGKGYC 352
           HG+ H  + P+ +++ R  G     V+ G  H  A       L SS   G ++TWG    
Sbjct: 373 HGDTHSVVHPKEVESLR--GSRAKSVACGPWHTAAIVETSGTLKSSAPGGKLFTWGDAGG 430

Query: 353 GALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDR 412
           G LGH ++  K +P  + SL      QV      T VL  TG V+  G    G LG    
Sbjct: 431 GKLGHTNKKSKLVPTRVESLIDCDFTQVSCGMSLTAVLTITGVVFTIGSKEHGQLG---N 487

Query: 413 GVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 463
             SD      +   L+   V  IS G  H  V+T  G++F +G     QLG
Sbjct: 488 SRSDNTSICMVEGPLKTEFVKDISCGSSHVAVLTMNGKVFTWGKGTEGQLG 538



 Score = 98.6 bits (244), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 82/275 (29%), Positives = 127/275 (46%), Gaps = 21/275 (7%)

Query: 204 IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 263
           I  PRL+++ + +  + +  G      +T +G V + G    G+LGH  +     PK I 
Sbjct: 220 ISLPRLLKSSQILNVQSIACGEKHAAIVTKQGQVFSWGEENGGRLGHKTSDSVSDPKIID 279

Query: 264 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQP----RAIQTFR 319
            L     V  IA G  Y  AV+ +G +Y +G G +  LG G+   +  P    + I T  
Sbjct: 280 SLAST-PVKTIAFGAKYTCAVSVSGELYEWGEGIH-SLGFGKNQCQRSPWFPHKLIST-- 335

Query: 320 RKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQ 379
             GI V++++ G  H   + S G +YT+G G  G LGHGD      P+ + SL+   A  
Sbjct: 336 SDGISVLKIACGQWHTAIISSLGKLYTYGYGTFGVLGHGDTHSVVHPKEVESLRGSRAKS 395

Query: 380 VCARKRKTFVLVDT----------GSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRA 429
           V      T  +V+T          G ++ +G  G G LG  ++      L P  ++SL  
Sbjct: 396 VACGPWHTAAIVETSGTLKSSAPGGKLFTWGDAGGGKLGHTNKKSK---LVPTRVESLID 452

Query: 430 HHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 464
              +Q+S G+  T V+T  G +F  G  E  QLG+
Sbjct: 453 CDFTQVSCGMSLTAVLTITGVVFTIGSKEHGQLGN 487



 Score = 76.6 bits (187), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 62/219 (28%), Positives = 104/219 (47%), Gaps = 14/219 (6%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V++++  + H A +   G+++T G  +    GH DT+  +  P+ VE+L+G   K V  G
Sbjct: 341 VLKIACGQWHTAIISSLGKLYTYGYGTFGVLGHGDTH-SVVHPKEVESLRGSRAKSVACG 399

Query: 225 LNFTGFL-----TIR-----GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQI 274
              T  +     T++     G + T G    G+LGH +   +  P  +  L +     Q+
Sbjct: 400 PWHTAAIVETSGTLKSSAPGGKLFTWGDAGGGKLGHTNKKSKLVPTRVESLIDC-DFTQV 458

Query: 275 AAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEH 334
           + G S    +T  GVV++ GS  +  LG+    +      +     K   V  +S G  H
Sbjct: 459 SCGMSLTAVLTITGVVFTIGSKEHGQLGNSRSDN--TSICMVEGPLKTEFVKDISCGSSH 516

Query: 335 VVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
           V  L  +G V+TWGKG  G LG GD +D++ P  + +L+
Sbjct: 517 VAVLTMNGKVFTWGKGTEGQLGLGDYVDRSSPTLVEALE 555



 Score = 75.9 bits (185), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 59/224 (26%), Positives = 102/224 (45%), Gaps = 20/224 (8%)

Query: 267 EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVV 326
           ++ +V  IA G  +   VT  G V+S+G  +   LGH        P+ I +       V 
Sbjct: 230 QILNVQSIACGEKHAAIVTKQGQVFSWGEENGGRLGHKTSDSVSDPKIIDSL--ASTPVK 287

Query: 327 RVSAGDEHVVALDSSGYVYTWGKGYCGALGHGD---EIDKTLPEPLSSLKSHLAV-QVCA 382
            ++ G ++  A+  SG +Y WG+G   +LG G    +     P  L S    ++V ++  
Sbjct: 288 TIAFGAKYTCAVSVSGELYEWGEGI-HSLGFGKNQCQRSPWFPHKLISTSDGISVLKIAC 346

Query: 383 RKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHT 442
            +  T ++   G +Y +G+  FG LG  D   +  V+ P+ ++SLR      ++ G +HT
Sbjct: 347 GQWHTAIISSLGKLYTYGYGTFGVLGHGD---THSVVHPKEVESLRGSRAKSVACGPWHT 403

Query: 443 VVVTDR----------GRLFGFGDNERAQLGHDTLRGCLEPTEI 476
             + +           G+LF +GD    +LGH   +  L PT +
Sbjct: 404 AAIVETSGTLKSSAPGGKLFTWGDAGGGKLGHTNKKSKLVPTRV 447



 Score = 69.7 bits (169), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 87/349 (24%), Positives = 144/349 (41%), Gaps = 25/349 (7%)

Query: 113 NMQ-ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRI-NFPSAAHVVQVS 169
           N+Q I  G  H  +++    VFS G    G LGH  +T+  VS  +I +  ++  V  ++
Sbjct: 233 NVQSIACGEKHAAIVTKQGQVFSWGEENGGRLGH--KTSDSVSDPKIIDSLASTPVKTIA 290

Query: 170 ASENHAAFVLQSGQVFTCGDN-SSFCCGHRDTNR-PIFRPRLVEALKGVPCKQVTAGLNF 227
               +   V  SG+++  G+   S   G     R P F  +L+    G+   ++  G   
Sbjct: 291 FGAKYTCAVSVSGELYEWGEGIHSLGFGKNQCQRSPWFPHKLISTSDGISVLKIACGQWH 350

Query: 228 TGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ-IAAGPSYMLAVTG 286
           T  ++  G ++T G  T G LGHGDT     PK +  L   GS  + +A GP +  A+  
Sbjct: 351 TAIISSLGKLYTYGYGTFGVLGHGDTHSVVHPKEVESLR--GSRAKSVACGPWHTAAIVE 408

Query: 287 N----------GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVV 336
                      G ++++G      LGH  +  +L P  +++         +VS G     
Sbjct: 409 TSGTLKSSAPGGKLFTWGDAGGGKLGHTNKKSKLVPTRVESL--IDCDFTQVSCGMSLTA 466

Query: 337 ALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSV 396
            L  +G V+T G    G LG+    + ++      LK+     +        VL   G V
Sbjct: 467 VLTITGVVFTIGSKEHGQLGNSRSDNTSICMVEGPLKTEFVKDISCGSSHVAVLTMNGKV 526

Query: 397 YGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVV 445
           + +G    G LG  D    D+   P ++++L    V  I+     T V 
Sbjct: 527 FTWGKGTEGQLGLGD--YVDRS-SPTLVEALEDKQVDSIACSSNFTAVT 572



 Score = 40.4 bits (93), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 19/56 (33%), Positives = 31/56 (55%)

Query: 421 PRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 476
           PR+L S +  +V  I+ G  H  +VT +G++F +G+    +LGH T     +P  I
Sbjct: 223 PRLLKSSQILNVQSIACGEKHAAIVTKQGQVFSWGEENGGRLGHKTSDSVSDPKII 278


>gi|405954062|gb|EKC21598.1| Putative E3 ubiquitin-protein ligase HERC4 [Crassostrea gigas]
          Length = 1059

 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 102/332 (30%), Positives = 155/332 (46%), Gaps = 14/332 (4%)

Query: 131 VFSCGSSLCGVLGHG-PETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGD 189
           VF  G S  G L  G  E T  +S   ++      + ++S  E H   V + G++++CG 
Sbjct: 4   VFGWGRSNDGQLSIGFSEETSILSPKEVSRLQELDIKEISCGEKHTLIVTKDGKLYSCGS 63

Query: 190 NSSFCCGH---RDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHG 246
           N     GH   R     I    LV +L  +   Q   G  F+  +T  G V + G N  G
Sbjct: 64  NEYGELGHSKPRSRAVSIDVVELVSSLSSMQVIQAAGGSEFSLVITTAGEVFSWGRNDKG 123

Query: 247 QLGHGD--TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHG 304
           QLG G     +   PK +  L  V +VVQI  G ++ LA+T +G ++S+G      LG G
Sbjct: 124 QLGRGKLSKEEERKPKLMKSLA-VCTVVQITCGANHCLALTDDGRLFSWGCNKYGQLGLG 182

Query: 305 EQHD-ELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK 363
             H     P+ I   R  GI + ++++G  H   L  S  V+ WGK   G LG  DE DK
Sbjct: 183 SSHSFHDTPQQIVCLR--GIPIAQIASGGNHSFILTWSRAVFGWGKNSFGQLGLNDEYDK 240

Query: 364 TLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRI 423
           + P    SL++   + +   +  T  L   G V+ FG  GFG LG       +++L  R+
Sbjct: 241 SHPTLCKSLRNQKVMYISCGEDHTVALTKEGGVFSFGAGGFGQLG--HNSTQNEILPKRV 298

Query: 424 LDSLRAHHVSQISTGLYHTVVVT-DRGRLFGF 454
           ++ L    +SQ++ G  HTV  +   G+++ F
Sbjct: 299 ME-LMGSVISQVACGRRHTVAFSPSSGKMYAF 329



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 87/282 (30%), Positives = 139/282 (49%), Gaps = 15/282 (5%)

Query: 204 IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 263
           I  P+ V  L+ +  K+++ G   T  +T  G +++CGSN +G+LGH     R    SI 
Sbjct: 25  ILSPKEVSRLQELDIKEISCGEKHTLIVTKDGKLYSCGSNEYGELGHSKPRSRAV--SID 82

Query: 264 PLEEVGS-----VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGE--QHDELQPRAIQ 316
            +E V S     V+Q A G  + L +T  G V+S+G      LG G+  + +E +P+ ++
Sbjct: 83  VVELVSSLSSMQVIQAAGGSEFSLVITTAGEVFSWGRNDKGQLGRGKLSKEEERKPKLMK 142

Query: 317 TFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEID-KTLPEPLSSLKSH 375
           +       VV+++ G  H +AL   G +++WG    G LG G        P+ +  L+  
Sbjct: 143 SL--AVCTVVQITCGANHCLALTDDGRLFSWGCNKYGQLGLGSSHSFHDTPQQIVCLRGI 200

Query: 376 LAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQI 435
              Q+ +    +F+L  + +V+G+G   FG LG  D    DK   P +  SLR   V  I
Sbjct: 201 PIAQIASGGNHSFILTWSRAVFGWGKNSFGQLGLNDE--YDKS-HPTLCKSLRNQKVMYI 257

Query: 436 STGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF 477
           S G  HTV +T  G +F FG     QLGH++ +  + P  + 
Sbjct: 258 SCGEDHTVALTKEGGVFSFGAGGFGQLGHNSTQNEILPKRVM 299



 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 84/292 (28%), Positives = 147/292 (50%), Gaps = 10/292 (3%)

Query: 115 QITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFP---SAAHVVQVSA 170
           +I+ G  HTL+++ +  ++SCGS+  G LGH    ++ VS   +      S+  V+Q + 
Sbjct: 41  EISCGEKHTLIVTKDGKLYSCGSNEYGELGHSKPRSRAVSIDVVELVSSLSSMQVIQAAG 100

Query: 171 SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFR-PRLVEALKGVPCKQVTAGLNFTG 229
               +  +  +G+VF+ G N     G    ++   R P+L+++L      Q+T G N   
Sbjct: 101 GSEFSLVITTAGEVFSWGRNDKGQLGRGKLSKEEERKPKLMKSLAVCTVVQITCGANHCL 160

Query: 230 FLTIRGHVHTCGSNTHGQLGHGDTLD-RPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG 288
            LT  G + + G N +GQLG G +     TP+ I  L  +  + QIA+G ++   +T + 
Sbjct: 161 ALTDDGRLFSWGCNKYGQLGLGSSHSFHDTPQQIVCLRGI-PIAQIASGGNHSFILTWSR 219

Query: 289 VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 348
            V+ +G  S   LG  +++D+  P   ++ R +   V+ +S G++H VAL   G V+++G
Sbjct: 220 AVFGWGKNSFGQLGLNDEYDKSHPTLCKSLRNQ--KVMYISCGEDHTVALTKEGGVFSFG 277

Query: 349 KGYCGALGHGDEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGF 399
            G  G LGH    ++ LP+ +  L   +  QV C R+        +G +Y F
Sbjct: 278 AGGFGQLGHNSTQNEILPKRVMELMGSVISQVACGRRHTVAFSPSSGKMYAF 329



 Score = 86.7 bits (213), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 85/277 (30%), Positives = 133/277 (48%), Gaps = 11/277 (3%)

Query: 103 SSDIVE--TSAGNMQITT---GRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR 156
           S D+VE  +S  +MQ+     G   +L+I+ +  VFS G +  G LG G  + +     +
Sbjct: 80  SIDVVELVSSLSSMQVIQAAGGSEFSLVITTAGEVFSWGRNDKGQLGRGKLSKEEERKPK 139

Query: 157 INFPSAA-HVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 215
           +    A   VVQ++   NH   +   G++F+ G N     G   ++     P+ +  L+G
Sbjct: 140 LMKSLAVCTVVQITCGANHCLALTDDGRLFSWGCNKYGQLGLGSSHSFHDTPQQIVCLRG 199

Query: 216 VPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA 275
           +P  Q+ +G N +  LT    V   G N+ GQLG  D  D+  P     L     V+ I+
Sbjct: 200 IPIAQIASGGNHSFILTWSRAVFGWGKNSFGQLGLNDEYDKSHPTLCKSLRN-QKVMYIS 258

Query: 276 AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHV 335
            G  + +A+T  G V+SFG+G    LGH    +E+ P+ +      G  + +V+ G  H 
Sbjct: 259 CGEDHTVALTKEGGVFSFGAGGFGQLGHNSTQNEILPKRVMELM--GSVISQVACGRRHT 316

Query: 336 VALD-SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSS 371
           VA   SSG +Y +G G  G LG GD   +  P P+ S
Sbjct: 317 VAFSPSSGKMYAFGSGGSGQLGLGDTSARNSPFPILS 353



 Score = 44.7 bits (104), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 26/74 (35%), Positives = 39/74 (52%), Gaps = 7/74 (9%)

Query: 399 FGW----MGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 454
           FGW     G  S+GF +      +L P+ +  L+   + +IS G  HT++VT  G+L+  
Sbjct: 5   FGWGRSNDGQLSIGFSEET---SILSPKEVSRLQELDIKEISCGEKHTLIVTKDGKLYSC 61

Query: 455 GDNERAQLGHDTLR 468
           G NE  +LGH   R
Sbjct: 62  GSNEYGELGHSKPR 75


>gi|449270679|gb|EMC81336.1| putative E3 ubiquitin-protein ligase HERC3 [Columba livia]
          Length = 1050

 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 97/303 (32%), Positives = 156/303 (51%), Gaps = 12/303 (3%)

Query: 164 HVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTA 223
           +V +V+   NH+ F+L+ G+V+TCG N+    GH        +P  + AL G     V  
Sbjct: 35  NVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHDCEGS---KPEQIGALAGQHIVHVAC 91

Query: 224 GLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPT-PKSIAPLEEVGSVVQIAAGPSYML 282
           G + +  L+ +G + + G+ + GQLG     D  T P+ I  L +  +++Q++ G  + L
Sbjct: 92  GESHSLALSDQGQLFSWGAGSDGQLGLTTIEDAVTVPRLIKKLNQ-QTILQVSCGNWHCL 150

Query: 283 AVTGNGVVYSFGSGSNFCLGHGEQ-HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 341
           A+  +G  +++G  S   LG G++   +  P+ +++    GI + +V+AG  H  AL  S
Sbjct: 151 ALAADGQFFTWGQNSYGQLGLGKECPSQASPQRVKSL--DGIPLAQVAAGGAHSFALSLS 208

Query: 342 GYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGW 401
           G V+ WGK   G LG  DE D+  P  +  L+S   V +   +  T VL  +G V+ FG 
Sbjct: 209 GAVFGWGKNSSGQLGLSDERDRESPCHVKLLRSQKVVYISCGEEHTAVLTKSGGVFTFGA 268

Query: 402 MGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV-VTDRGRLFGFGDNERA 460
              G LG     ++D+V  PR +  L    VSQI+ G +HT+  V   G ++ FG   R 
Sbjct: 269 GSCGQLG--HDSMNDEV-NPRRVLELMGSEVSQIACGRHHTLAFVPSSGMIYAFGCGTRG 325

Query: 461 QLG 463
           QLG
Sbjct: 326 QLG 328



 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 91/266 (34%), Positives = 136/266 (51%), Gaps = 20/266 (7%)

Query: 219 KQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS-----VVQ 273
           K+V  G N + FL   G V+TCG NT GQLGH     +P        E++G+     +V 
Sbjct: 37  KEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHDCEGSKP--------EQIGALAGQHIVH 88

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQ-PRAIQTFRRKGIHVVRVSAGD 332
           +A G S+ LA++  G ++S+G+GS+  LG     D +  PR I+   ++ I  ++VS G+
Sbjct: 89  VACGESHSLALSDQGQLFSWGAGSDGQLGLTTIEDAVTVPRLIKKLNQQTI--LQVSCGN 146

Query: 333 EHVVALDSSGYVYTWGKGYCGALGHGDEI-DKTLPEPLSSLKSHLAVQVCARKRKTFVLV 391
            H +AL + G  +TWG+   G LG G E   +  P+ + SL      QV A    +F L 
Sbjct: 147 WHCLALAADGQFFTWGQNSYGQLGLGKECPSQASPQRVKSLDGIPLAQVAAGGAHSFALS 206

Query: 392 DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRL 451
            +G+V+G+G    G LG  D    +    P  +  LR+  V  IS G  HT V+T  G +
Sbjct: 207 LSGAVFGWGKNSSGQLGLSDERDRES---PCHVKLLRSQKVVYISCGEEHTAVLTKSGGV 263

Query: 452 FGFGDNERAQLGHDTLRGCLEPTEIF 477
           F FG     QLGHD++   + P  + 
Sbjct: 264 FTFGAGSCGQLGHDSMNDEVNPRRVL 289



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 89/309 (28%), Positives = 147/309 (47%), Gaps = 14/309 (4%)

Query: 102 HSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPS 161
           H  ++ E + G      G +   L+ +  V++CG +  G LGH  E ++     +I   +
Sbjct: 32  HDRNVKEVACG------GNHSVFLLEDGEVYTCGLNTKGQLGHDCEGSKP---EQIGALA 82

Query: 162 AAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQV 221
             H+V V+  E+H+  +   GQ+F+ G  S    G       +  PRL++ L      QV
Sbjct: 83  GQHIVHVACGESHSLALSDQGQLFSWGAGSDGQLGLTTIEDAVTVPRLIKKLNQQTILQV 142

Query: 222 TAGLNFTGFLTIRGHVHTCGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSY 280
           + G      L   G   T G N++GQLG G +   + +P+ +  L+ +  + Q+AAG ++
Sbjct: 143 SCGNWHCLALAADGQFFTWGQNSYGQLGLGKECPSQASPQRVKSLDGI-PLAQVAAGGAH 201

Query: 281 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 340
             A++ +G V+ +G  S+  LG  ++ D   P  ++  R +   VV +S G+EH   L  
Sbjct: 202 SFALSLSGAVFGWGKNSSGQLGLSDERDRESPCHVKLLRSQ--KVVYISCGEEHTAVLTK 259

Query: 341 SGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGF 399
           SG V+T+G G CG LGH    D+  P  +  L      Q+ C R      +  +G +Y F
Sbjct: 260 SGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVSQIACGRHHTLAFVPSSGMIYAF 319

Query: 400 GWMGFGSLG 408
           G    G LG
Sbjct: 320 GCGTRGQLG 328



 Score =  102 bits (255), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 84/266 (31%), Positives = 124/266 (46%), Gaps = 8/266 (3%)

Query: 114 MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           + +  G  H+L +S+   +FS G+   G LG             I   +   ++QVS   
Sbjct: 87  VHVACGESHSLALSDQGQLFSWGAGSDGQLGLTTIEDAVTVPRLIKKLNQQTILQVSCGN 146

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            H   +   GQ FT G NS    G          P+ V++L G+P  QV AG   +  L+
Sbjct: 147 WHCLALAADGQFFTWGQNSYGQLGLGKECPSQASPQRVKSLDGIPLAQVAAGGAHSFALS 206

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
           + G V   G N+ GQLG  D  DR +P  +  L     VV I+ G  +   +T +G V++
Sbjct: 207 LSGAVFGWGKNSSGQLGLSDERDRESPCHVKLLRS-QKVVYISCGEEHTAVLTKSGGVFT 265

Query: 293 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA-LDSSGYVYTWGKGY 351
           FG+GS   LGH   +DE+ PR +      G  V +++ G  H +A + SSG +Y +G G 
Sbjct: 266 FGAGSCGQLGHDSMNDEVNPRRV--LELMGSEVSQIACGRHHTLAFVPSSGMIYAFGCGT 323

Query: 352 CGALGHGDEIDKTLPEPLSSLKSHLA 377
            G LG G   +   P P   +K H A
Sbjct: 324 RGQLGTGHTCNVKCPSP---VKGHWA 346



 Score = 47.0 bits (110), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 39/144 (27%), Positives = 62/144 (43%), Gaps = 10/144 (6%)

Query: 347 WGKGYCGALGHGDEIDKTLPEPLSSLKSH---LAVQVCARKRKTFVLVDTGSVYGFGWMG 403
           WG    G  G G  I   +PEP      H   +    C      F+L D G VY  G   
Sbjct: 4   WGYSSFGQPGIGSNIQVIVPEPQVYGFIHDRNVKEVACGGNHSVFLLED-GEVYTCGLNT 62

Query: 404 FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 463
            G LG    G      +P  + +L   H+  ++ G  H++ ++D+G+LF +G     QLG
Sbjct: 63  KGQLGHDCEGS-----KPEQIGALAGQHIVHVACGESHSLALSDQGQLFSWGAGSDGQLG 117

Query: 464 HDTLRGCLEPTEIFIQEMEEDTGL 487
             T+   +    + I+++ + T L
Sbjct: 118 LTTIEDAVTVPRL-IKKLNQQTIL 140


>gi|344251059|gb|EGW07163.1| putative E3 ubiquitin-protein ligase HERC1 [Cricetulus griseus]
          Length = 1016

 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 101/339 (29%), Positives = 167/339 (49%), Gaps = 17/339 (5%)

Query: 115 QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQV---SA 170
           Q+  G+  T +I +N +V +CG    G LG G  +      T I+      V Q+     
Sbjct: 186 QVICGQNCTFVIQANGTVLACGEGSYGRLGQG-NSDDLHVLTVISALQGFVVTQLVTSCG 244

Query: 171 SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
           S+ H+  + +SG+VF+ GD      GH +++R   RPR +EAL+G    Q++ G   +  
Sbjct: 245 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQMSCGFKHSAV 303

Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSVVQIAAGPSYMLAVTGNG 288
           +T  G + T G+  +G+LG G+T ++  P+ +  LE  ++G   Q+A G ++ LAV+ +G
Sbjct: 304 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIG---QVACGLNHTLAVSADG 360

Query: 289 -VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 347
            +V++FG G    LG G    +  P+ +      GI + +V+ G +  VAL   G+VYT+
Sbjct: 361 SMVWAFGDGDYGKLGLGNSTAKSSPQKVDVL--CGIGIKKVACGTQFSVALTKDGHVYTF 418

Query: 348 GKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSL 407
           G+     L  G   +   P+ +  L   +   V      T  L  TG VY +G    G L
Sbjct: 419 GQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQL 478

Query: 408 GFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT 446
           G    G ++ V  P ++  L+  ++ QIS G  H+   T
Sbjct: 479 GL---GHTNHVREPTLVTVLQGKNIRQISAGRCHSAAWT 514



 Score = 96.3 bits (238), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 87/324 (26%), Positives = 150/324 (46%), Gaps = 13/324 (4%)

Query: 160 PSAAHVVQVSASENHAAFVLQS-GQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPC 218
           PS +   QV   +N   FV+Q+ G V  CG+ S    G  +++  +    ++ AL+G   
Sbjct: 179 PSFSQAQQVICGQN-CTFVIQANGTVLACGEGSYGRLGQGNSDD-LHVLTVISALQGFVV 236

Query: 219 KQVTAGLNFTGF---LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA 275
            Q+       G    LT  G V + G   +G+LGHG++  +  P+ I  L+    VVQ++
Sbjct: 237 TQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQG-EEVVQMS 295

Query: 276 AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHV 335
            G  +   VT +G +++FG+G    LG G   ++  P  +     +G  + +V+ G  H 
Sbjct: 296 CGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTAL--EGYQIGQVACGLNHT 353

Query: 336 VALDSSG-YVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 394
           +A+ + G  V+ +G G  G LG G+   K+ P+ +  L      +V    + +  L   G
Sbjct: 354 LAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDG 413

Query: 395 SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 454
            VY FG      +G P+ G +    RP+ +  L    +  ++ G  HT+ +   G ++ +
Sbjct: 414 HVYTFGQDRL--IGLPE-GRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAW 470

Query: 455 GDNERAQLGHDTLRGCLEPTEIFI 478
           G N   QLG        EPT + +
Sbjct: 471 GSNSEGQLGLGHTNHVREPTLVTV 494



 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 68/230 (29%), Positives = 108/230 (46%), Gaps = 11/230 (4%)

Query: 237 VHTCGSNTHGQLGH-GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 295
           V+  G+  HGQL   G  +  P   + AP        Q+  G +    +  NG V + G 
Sbjct: 154 VYLWGAGRHGQLAEAGRNVMVP---ATAP--SFSQAQQVICGQNCTFVIQANGTVLACGE 208

Query: 296 GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG-DEHVVALDSSGYVYTWGKGYCGA 354
           GS   LG G   D      I   +   +  +  S G D H +AL  SG V++WG G  G 
Sbjct: 209 GSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGK 268

Query: 355 LGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGV 414
           LGHG+   +  P  + +L+    VQ+    + + V+   G ++ FG   +G LG  +   
Sbjct: 269 LGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN--T 326

Query: 415 SDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRL-FGFGDNERAQLG 463
           S+K L P  + +L  + + Q++ GL HT+ V+  G + + FGD +  +LG
Sbjct: 327 SNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLG 375



 Score = 48.9 bits (115), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 41/143 (28%), Positives = 67/143 (46%), Gaps = 9/143 (6%)

Query: 344 VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 403
           VY WG G  G L    E  + +  P ++     A QV   +  TFV+   G+V   G   
Sbjct: 154 VYLWGAGRHGQLA---EAGRNVMVPATAPSFSQAQQVICGQNCTFVIQANGTVLACGEGS 210

Query: 404 FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLY---HTVVVTDRGRLFGFGDNERA 460
           +G LG   +G SD +    ++ +L+   V+Q+ T      H++ +T+ G +F +GD +  
Sbjct: 211 YGRLG---QGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYG 267

Query: 461 QLGHDTLRGCLEPTEIFIQEMEE 483
           +LGH        P +I   + EE
Sbjct: 268 KLGHGNSDRQRRPRQIEALQGEE 290


>gi|195014693|ref|XP_001984062.1| GH15214 [Drosophila grimshawi]
 gi|193897544|gb|EDV96410.1| GH15214 [Drosophila grimshawi]
          Length = 1052

 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 104/341 (30%), Positives = 162/341 (47%), Gaps = 17/341 (4%)

Query: 130 SVFSCGSSLCGVLGHG-PETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCG 188
            ++  G++  G LG G  E  Q ++ +++ +   + V Q++    H  F+  SG+V+ CG
Sbjct: 2   ELYCWGNASHGQLGLGGIEDEQILTPSKMPWQPDSAVNQIACGHRHTLFLTASGKVYACG 61

Query: 189 DNSSFCCGHR-DTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQ 247
            N     GH   + RP+  P LV+ +      Q+  G   +  LT  G V + G N  GQ
Sbjct: 62  SNDYAQLGHELSSKRPLQIPELVDCV----ITQIACGSRHSMALTEWGQVLSWGDNECGQ 117

Query: 248 LGHGDTLD-RPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ 306
           LGH    D    PK++  L    +VVQIA G ++ LA+T  G +Y++GS     LG    
Sbjct: 118 LGHASDQDVVQLPKTVRALVS-KTVVQIACGNNHSLALTCCGELYAWGSNIYGQLGVKTP 176

Query: 307 HDELQ---PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK 363
            +  Q   P  + T    GI V  ++ G  H   +  S  V+ WG+  CG LG  DE ++
Sbjct: 177 SELGQCNAPMLLTTLL--GIPVRAIACGGNHSFLISKSSAVFGWGRNNCGQLGLNDETNR 234

Query: 364 TLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRI 423
             P  L +L++     V      +  L + G V+  G   +G LG    G     + PR+
Sbjct: 235 AYPTQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGAYGQLG---HGFCGNEMLPRM 291

Query: 424 LDSLRAHHVSQISTGLYHTV-VVTDRGRLFGFGDNERAQLG 463
           +  L    +SQ++ G  HT+ +V  RGR++GFG     QLG
Sbjct: 292 VMELMGSTISQVACGNRHTLAMVPARGRIYGFGLGSSGQLG 332



 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 97/315 (30%), Positives = 137/315 (43%), Gaps = 43/315 (13%)

Query: 115 QITTGRYHTLLISNS-SVFSCGSSLCGVLGHG---------PETTQCVSFTRINFPSAAH 164
           QI  G  HTL ++ S  V++CGS+    LGH          PE   CV            
Sbjct: 40  QIACGHRHTLFLTASGKVYACGSNDYAQLGHELSSKRPLQIPELVDCV------------ 87

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           + Q++    H+  + + GQV + GDN     GH      +  P+ V AL      Q+  G
Sbjct: 88  ITQIACGSRHSMALTEWGQVLSWGDNECGQLGHASDQDVVQLPKTVRALVSKTVVQIACG 147

Query: 225 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSI----APLEEVG----SVVQIAA 276
            N +  LT  G ++  GSN +GQLG        TP  +    AP+         V  IA 
Sbjct: 148 NNHSLALTCCGELYAWGSNIYGQLG------VKTPSELGQCNAPMLLTTLLGIPVRAIAC 201

Query: 277 GPSYMLAVTGNGVVYSFGSGSNFC--LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEH 334
           G ++   ++ +  V  FG G N C  LG  ++ +   P  ++T R  G+    V+ GDE 
Sbjct: 202 GGNHSFLISKSSAV--FGWGRNNCGQLGLNDETNRAYPTQLKTLRTLGVRF--VACGDEF 257

Query: 335 VVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDT- 393
            V L + G V+T G G  G LGHG   ++ LP  +  L      QV    R T  +V   
Sbjct: 258 SVFLTNEGGVFTCGAGAYGQLGHGFCGNEMLPRMVMELMGSTISQVACGNRHTLAMVPAR 317

Query: 394 GSVYGFGWMGFGSLG 408
           G +YGFG    G LG
Sbjct: 318 GRIYGFGLGSSGQLG 332



 Score = 96.7 bits (239), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 73/245 (29%), Positives = 113/245 (46%), Gaps = 10/245 (4%)

Query: 236 HVHTCGSNTHGQLGHGDTLDRP--TPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
            ++  G+ +HGQLG G   D    TP  + P +   +V QIA G  + L +T +G VY+ 
Sbjct: 2   ELYCWGNASHGQLGLGGIEDEQILTPSKM-PWQPDSAVNQIACGHRHTLFLTASGKVYAC 60

Query: 294 GSGSNFCLGHGEQHDELQ-PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 352
           GS     LGH     EL   R +Q        + +++ G  H +AL   G V +WG   C
Sbjct: 61  GSNDYAQLGH-----ELSSKRPLQIPELVDCVITQIACGSRHSMALTEWGQVLSWGDNEC 115

Query: 353 GALGHGDEIDKT-LPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 411
           G LGH  + D   LP+ + +L S   VQ+      +  L   G +Y +G   +G LG   
Sbjct: 116 GQLGHASDQDVVQLPKTVRALVSKTVVQIACGNNHSLALTCCGELYAWGSNIYGQLGVKT 175

Query: 412 RGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCL 471
                +   P +L +L    V  I+ G  H+ +++    +FG+G N   QLG +      
Sbjct: 176 PSELGQCNAPMLLTTLLGIPVRAIACGGNHSFLISKSSAVFGWGRNNCGQLGLNDETNRA 235

Query: 472 EPTEI 476
            PT++
Sbjct: 236 YPTQL 240



 Score = 53.1 bits (126), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 47/149 (31%), Positives = 66/149 (44%), Gaps = 4/149 (2%)

Query: 116 ITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           I  G  H+ LIS SS VF  G + CG LG   ET +    T++       V  V+  +  
Sbjct: 199 IACGGNHSFLISKSSAVFGWGRNNCGQLGLNDETNRAYP-TQLKTLRTLGVRFVACGDEF 257

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFT-GFLTI 233
           + F+   G VFTCG  +    GH      +  PR+V  L G    QV  G   T   +  
Sbjct: 258 SVFLTNEGGVFTCGAGAYGQLGHGFCGNEML-PRMVMELMGSTISQVACGNRHTLAMVPA 316

Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPTPKSI 262
           RG ++  G  + GQLG  +T     P+ +
Sbjct: 317 RGRIYGFGLGSSGQLGTRNTKSLNLPQMV 345


>gi|125821491|ref|XP_698091.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Danio
            rerio]
          Length = 4846

 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 102/339 (30%), Positives = 168/339 (49%), Gaps = 17/339 (5%)

Query: 115  QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQV---SA 170
            Q+  G+  T +I +N +V +CG    G LG G      V  T I+      V Q+     
Sbjct: 4016 QVVCGQNCTFVIQANGTVSACGEGSYGRLGQGNSDDLHV-LTVISALQGFVVTQMVTSCG 4074

Query: 171  SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
            S+ H+  + +SG+VF+ GD      GH +++R   RPR +EAL+G    Q++ G   +  
Sbjct: 4075 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQMSCGFKHSAV 4133

Query: 231  LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSVVQIAAGPSYMLAVTGNG 288
            +T  G + + G+  +G+LG G+T ++  P+ ++ LE  +VG   Q+A G ++ LAV+ +G
Sbjct: 4134 VTSDGKLFSFGNGDYGRLGLGNTSNKKLPERVSALEGHQVG---QVACGLNHTLAVSADG 4190

Query: 289  V-VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 347
            + V++FG G    LG G    +  P+ +      GI + +V+ G +  VAL   G VYT+
Sbjct: 4191 MTVWAFGDGDYGKLGLGNSTAKSSPQKVDVL--CGIGIKKVACGTQFSVALTKDGNVYTF 4248

Query: 348  GKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSL 407
            G+     L  G   +   P+ + +L       V      T  L  TG VY +G    G L
Sbjct: 4249 GQDRLIGLPEGRARNHNRPQQVPALTGVFIEDVAVGAEHTLTLSSTGDVYAWGSNSEGQL 4308

Query: 408  GFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT 446
            G    G ++ V  P ++ +L+  ++ QIS G  H+   T
Sbjct: 4309 GL---GHTNHVREPTLISALQGKNIQQISAGRCHSAAWT 4344



 Score =  122 bits (305), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 95/337 (28%), Positives = 161/337 (47%), Gaps = 16/337 (4%)

Query: 116 ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSAS--- 171
           I  G+Y T +IS + SV +CG    G LG G    Q  +  ++ F     + +VS+S   
Sbjct: 403 IEAGQYCTFVISSDGSVRACGKGSYGRLGLGDSNNQS-TLKKLTFEPHRAIKKVSSSKGS 461

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVE-ALKGVPCKQVTAGLNFTGF 230
           + H       G+VF+ GD      GH +++   + P+L++  L+G     V+AG   +  
Sbjct: 462 DGHTLAFTSEGEVFSWGDGDYGKLGHGNSSTQKY-PKLIQGPLQGKVVVCVSAGYRHSAA 520

Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG-V 289
           ++  G ++T G    G+LGHGD+  R  P  +  +  VG   +++ G S+ +A++ +G  
Sbjct: 521 VSEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG---EVSCGSSHTIALSKDGRT 577

Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 349
           V+SFG G N  LGHG+ +   +P+ ++    +G+ + +V AG +  +AL S+G VY WG 
Sbjct: 578 VWSFGGGDNGKLGHGDTNRVYKPKVVEAL--QGMFIRKVCAGSQSSLALTSTGQVYAWGC 635

Query: 350 GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGF 409
           G C   G   E     P+ +  L +   V +         L     VY +G    G  G 
Sbjct: 636 GACLGCG-SSEATALRPKLIEELATTRVVDISIGDSHCLALSHDNEVYAWGNNSMGQCG- 693

Query: 410 PDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT 446
                +  + +P+ +  L    + QIS G  H++  T
Sbjct: 694 -QGNSTGPITKPKKVIGLDGVAIQQISAGTSHSLAWT 729



 Score =  108 bits (270), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 94/316 (29%), Positives = 147/316 (46%), Gaps = 27/316 (8%)

Query: 160 PSAAHVVQVSASENHAAFVLQS-GQVFTCGDNSSFCCGHRDTN------RPIFRPRLVEA 212
           PS +    + A + +  FV+ S G V  CG  S    G  D+N      +  F P    A
Sbjct: 395 PSFSDAQTIEAGQ-YCTFVISSDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPH--RA 451

Query: 213 LKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV 272
           +K V   + + G   T   T  G V + G   +G+LGHG++  +  PK I    +   VV
Sbjct: 452 IKKVSSSKGSDG--HTLAFTSEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVV 509

Query: 273 QIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGD 332
            ++AG  +  AV+ +G +Y++G G    LGHG+ +     R I T  +   +V  VS G 
Sbjct: 510 CVSAGYRHSAAVSEDGELYTWGEGDFGRLGHGDSNS----RNIPTLVKDISNVGEVSCGS 565

Query: 333 EHVVALDSSGY-VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 391
            H +AL   G  V+++G G  G LGHGD      P+ + +L+     +VCA  + +  L 
Sbjct: 566 SHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVVEALQGMFIRKVCAGSQSSLALT 625

Query: 392 DTGSVYGFGW---MGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDR 448
            TG VY +G    +G GS            LRP++++ L    V  IS G  H + ++  
Sbjct: 626 STGQVYAWGCGACLGCGS-------SEATALRPKLIEELATTRVVDISIGDSHCLALSHD 678

Query: 449 GRLFGFGDNERAQLGH 464
             ++ +G+N   Q G 
Sbjct: 679 NEVYAWGNNSMGQCGQ 694



 Score = 99.4 bits (246), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 90/322 (27%), Positives = 152/322 (47%), Gaps = 13/322 (4%)

Query: 160  PSAAHVVQVSASENHAAFVLQS-GQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPC 218
            PS +   QV   +N   FV+Q+ G V  CG+ S    G  +++  +    ++ AL+G   
Sbjct: 4009 PSFSQAQQVVCGQN-CTFVIQANGTVSACGEGSYGRLGQGNSDD-LHVLTVISALQGFVV 4066

Query: 219  KQVTAGLNFTGF---LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA 275
             Q+       G    LT  G V + G   +G+LGHG++  +  P+ I  L+    VVQ++
Sbjct: 4067 TQMVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQG-EEVVQMS 4125

Query: 276  AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHV 335
             G  +   VT +G ++SFG+G    LG G   ++  P  +     +G  V +V+ G  H 
Sbjct: 4126 CGFKHSAVVTSDGKLFSFGNGDYGRLGLGNTSNKKLPERVSAL--EGHQVGQVACGLNHT 4183

Query: 336  VALDSSGY-VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 394
            +A+ + G  V+ +G G  G LG G+   K+ P+ +  L      +V    + +  L   G
Sbjct: 4184 LAVSADGMTVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDG 4243

Query: 395  SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 454
            +VY FG      +G P+ G +    RP+ + +L    +  ++ G  HT+ ++  G ++ +
Sbjct: 4244 NVYTFGQDRL--IGLPE-GRARNHNRPQQVPALTGVFIEDVAVGAEHTLTLSSTGDVYAW 4300

Query: 455  GDNERAQLGHDTLRGCLEPTEI 476
            G N   QLG        EPT I
Sbjct: 4301 GSNSEGQLGLGHTNHVREPTLI 4322



 Score = 89.0 bits (219), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 71/230 (30%), Positives = 108/230 (46%), Gaps = 11/230 (4%)

Query: 237  VHTCGSNTHGQLGH-GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 295
            V   G+  HGQL   G  +  PT   +AP        Q+  G +    +  NG V + G 
Sbjct: 3984 VFLWGAGRHGQLAEAGRNILVPT---LAP--SFSQAQQVVCGQNCTFVIQANGTVSACGE 4038

Query: 296  GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG-DEHVVALDSSGYVYTWGKGYCGA 354
            GS   LG G   D      I   +   +  +  S G D H +AL  SG V++WG G  G 
Sbjct: 4039 GSYGRLGQGNSDDLHVLTVISALQGFVVTQMVTSCGSDGHSMALTESGEVFSWGDGDYGK 4098

Query: 355  LGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGV 414
            LGHG+   +  P  + +L+    VQ+    + + V+   G ++ FG   +G LG  +   
Sbjct: 4099 LGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFSFGNGDYGRLGLGN--T 4156

Query: 415  SDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGR-LFGFGDNERAQLG 463
            S+K L P  + +L  H V Q++ GL HT+ V+  G  ++ FGD +  +LG
Sbjct: 4157 SNKKL-PERVSALEGHQVGQVACGLNHTLAVSADGMTVWAFGDGDYGKLG 4205



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 55/196 (28%), Positives = 90/196 (45%), Gaps = 15/196 (7%)

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           I AG + M++ T    VY +GS S+  L  G Q   LQP+   +F         + AG  
Sbjct: 355 IQAGEAAMVSETCE--VYVWGSNSSHQLVEGTQEKILQPKLAPSFS----DAQTIEAGQY 408

Query: 334 HVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKR----KTFV 389
               + S G V   GKG  G LG GD  +++  + L + + H A++  +  +     T  
Sbjct: 409 CTFVISSDGSVRACGKGSYGRLGLGDSNNQSTLKKL-TFEPHRAIKKVSSSKGSDGHTLA 467

Query: 390 LVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILD-SLRAHHVSQISTGLYHTVVVTDR 448
               G V+ +G   +G LG    G S     P+++   L+   V  +S G  H+  V++ 
Sbjct: 468 FTSEGEVFSWGDGDYGKLG---HGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVSED 524

Query: 449 GRLFGFGDNERAQLGH 464
           G L+ +G+ +  +LGH
Sbjct: 525 GELYTWGEGDFGRLGH 540



 Score = 46.2 bits (108), Expect = 0.041,   Method: Compositional matrix adjust.
 Identities = 46/169 (27%), Positives = 75/169 (44%), Gaps = 19/169 (11%)

Query: 328  VSAGDEHVVALDSSGY----------VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLA 377
            VS  DE V++  +S            V+ WG G  G L    E  + +  P  +     A
Sbjct: 3958 VSGMDEQVMSWATSRPEDWHLGGKCDVFLWGAGRHGQLA---EAGRNILVPTLAPSFSQA 4014

Query: 378  VQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIST 437
             QV   +  TFV+   G+V   G   +G LG   +G SD +    ++ +L+   V+Q+ T
Sbjct: 4015 QQVVCGQNCTFVIQANGTVSACGEGSYGRLG---QGNSDDLHVLTVISALQGFVVTQMVT 4071

Query: 438  GLY---HTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQEMEE 483
                  H++ +T+ G +F +GD +  +LGH        P +I   + EE
Sbjct: 4072 SCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEE 4120


>gi|322795632|gb|EFZ18311.1| hypothetical protein SINV_02346 [Solenopsis invicta]
          Length = 3628

 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 100/331 (30%), Positives = 154/331 (46%), Gaps = 12/331 (3%)

Query: 147  ETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFR 206
            + T  VSF   ++      V +  S +      Q   V+  G N     G    ++ I  
Sbjct: 2557 QLTTSVSFLASDWEVLQEQVAIQRSTDTPP---QQSAVYVWGLNDKDQLGGLKGSK-IKL 2612

Query: 207  PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 266
            P   E L  +    +  G      ++  G ++ CG  T+G+LG GD  +   PK+I  L 
Sbjct: 2613 PIYSEVLSKLKPIHIAGGSKTLFIVSQEGKLYACGEGTNGRLGLGDDNNVCEPKAIPFLS 2672

Query: 267  E-VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHV 325
            + V   V + +G  + LA+T +G V+S+G G +  LGHG      +P+ I+  + K I  
Sbjct: 2673 QFVIKKVAVHSGGKHALALTQDGKVFSWGEGEDGKLGHGNCISLDKPKLIEILKSKRIR- 2731

Query: 326  VRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVC--AR 383
              ++ G  H  A+ S+G +YTWG G  G LGHGD I +T P+ + +L     VQV   +R
Sbjct: 2732 -DIACGSGHSAAIASNGELYTWGLGEYGRLGHGDTITQTRPKLVQALVGQRVVQVACGSR 2790

Query: 384  KRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV 443
              +T  L   G VY +G   FG LG   RG SD    P  +D L    V Q+  G   ++
Sbjct: 2791 DAQTMALTTDGCVYSWGDGDFGKLG---RGGSDGCYTPLAVDRLNGLGVIQVECGAQFSL 2847

Query: 444  VVTDRGRLFGFGDNERAQLGHDTLRGCLEPT 474
             +T  G ++ +G  +  +LGH       +PT
Sbjct: 2848 ALTKYGEVWTWGKGDYFRLGHGNDHHVRKPT 2878



 Score =  122 bits (306), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 96/318 (30%), Positives = 151/318 (47%), Gaps = 14/318 (4%)

Query: 131  VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHV--VQVSASENHAAFVLQSGQVFTCG 188
            +++CG    G LG G +   C     I F S   +  V V +   HA  + Q G+VF+ G
Sbjct: 2643 LYACGEGTNGRLGLGDDNNVC-EPKAIPFLSQFVIKKVAVHSGGKHALALTQDGKVFSWG 2701

Query: 189  DNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQL 248
            +      GH +    + +P+L+E LK    + +  G   +  +   G ++T G   +G+L
Sbjct: 2702 EGEDGKLGHGNC-ISLDKPKLIEILKSKRIRDIACGSGHSAAIASNGELYTWGLGEYGRL 2760

Query: 249  GHGDTLDRPTPKSIAPLEEVGS-VVQIAAGP--SYMLAVTGNGVVYSFGSGSNFCLGHGE 305
            GHGDT+ +  PK +  L  VG  VVQ+A G   +  +A+T +G VYS+G G    LG G 
Sbjct: 2761 GHGDTITQTRPKLVQAL--VGQRVVQVACGSRDAQTMALTTDGCVYSWGDGDFGKLGRGG 2818

Query: 306  QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTL 365
                  P A+   R  G+ V++V  G +  +AL   G V+TWGKG    LGHG++     
Sbjct: 2819 SDGCYTPLAVD--RLNGLGVIQVECGAQFSLALTKYGEVWTWGKGDYFRLGHGNDHHVRK 2876

Query: 366  PEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILD 425
            P  +  L+    + V         + DTG VY +G    G  G    G +    +P ++ 
Sbjct: 2877 PTLVEGLRGKKIIHVAVGALHCLAVTDTGQVYAWGDNDHGQQG---NGATSVNRKPSLVH 2933

Query: 426  SLRAHHVSQISTGLYHTV 443
             L    V+++S G  H++
Sbjct: 2934 DLEDARVNRVSCGSSHSI 2951



 Score =  119 bits (297), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 89/320 (27%), Positives = 148/320 (46%), Gaps = 17/320 (5%)

Query: 155  TRINFPSAAHV------VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPR 208
            ++I  P  + V      + ++        V Q G+++ CG+ ++   G  D N  +  P+
Sbjct: 2608 SKIKLPIYSEVLSKLKPIHIAGGSKTLFIVSQEGKLYACGEGTNGRLGLGDDNN-VCEPK 2666

Query: 209  LVEALKGVPCKQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 266
             +  L     K+V   +G      LT  G V + G    G+LGHG+ +    PK I  L+
Sbjct: 2667 AIPFLSQFVIKKVAVHSGGKHALALTQDGKVFSWGEGEDGKLGHGNCISLDKPKLIEILK 2726

Query: 267  EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVV 326
                +  IA G  +  A+  NG +Y++G G    LGHG+   + +P+ +Q     G  VV
Sbjct: 2727 S-KRIRDIACGSGHSAAIASNGELYTWGLGEYGRLGHGDTITQTRPKLVQAL--VGQRVV 2783

Query: 327  RVSAG--DEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARK 384
            +V+ G  D   +AL + G VY+WG G  G LG G       P  +  L     +QV    
Sbjct: 2784 QVACGSRDAQTMALTTDGCVYSWGDGDFGKLGRGGSDGCYTPLAVDRLNGLGVIQVECGA 2843

Query: 385  RKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV 444
            + +  L   G V+ +G   +  LG    G    V +P +++ LR   +  ++ G  H + 
Sbjct: 2844 QFSLALTKYGEVWTWGKGDYFRLG---HGNDHHVRKPTLVEGLRGKKIIHVAVGALHCLA 2900

Query: 445  VTDRGRLFGFGDNERAQLGH 464
            VTD G+++ +GDN+  Q G+
Sbjct: 2901 VTDTGQVYAWGDNDHGQQGN 2920



 Score =  109 bits (273), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 93/314 (29%), Positives = 140/314 (44%), Gaps = 27/314 (8%)

Query: 119  GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTR---INFPSAAHVVQVSASENHA 175
            G++   L  +  VFS G    G LGHG     C+S  +   I    +  +  ++    H+
Sbjct: 2685 GKHALALTQDGKVFSWGEGEDGKLGHG----NCISLDKPKLIEILKSKRIRDIACGSGHS 2740

Query: 176  AFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN--FTGFLTI 233
            A +  +G+++T G       GH DT     RP+LV+AL G    QV  G     T  LT 
Sbjct: 2741 AAIASNGELYTWGLGEYGRLGHGDTITQT-RPKLVQALVGQRVVQVACGSRDAQTMALTT 2799

Query: 234  RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
             G V++ G    G+LG G +    TP ++  L  +G V+Q+  G  + LA+T  G V+++
Sbjct: 2800 DGCVYSWGDGDFGKLGRGGSDGCYTPLAVDRLNGLG-VIQVECGAQFSLALTKYGEVWTW 2858

Query: 294  GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 353
            G G  F LGHG  H   +P  ++  R  G  ++ V+ G  H +A+  +G VY WG    G
Sbjct: 2859 GKGDYFRLGHGNDHHVRKPTLVEGLR--GKKIIHVAVGALHCLAVTDTGQVYAWGDNDHG 2916

Query: 354  ALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRG 413
              G+G       P  +  L+        AR  +    V  GS +   W+       P  G
Sbjct: 2917 QQGNGATSVNRKPSLVHDLED-------ARVNR----VSCGSSHSIAWVLVDQ---PSNG 2962

Query: 414  VSDKVLRPRILDSL 427
              D V  P + D L
Sbjct: 2963 NQDPVTFPTVRDPL 2976



 Score =  108 bits (271), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 72/232 (31%), Positives = 118/232 (50%), Gaps = 4/232 (1%)

Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 290
           LT  G V++ G+   G+LGHGDT+    PK I  L +  ++V IA G +Y  A++ +G +
Sbjct: 162 LTQDGCVYSWGNGDGGRLGHGDTVSYDEPKLIESLLD-KNIVFIACGSTYSAALSASGEL 220

Query: 291 YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKG 350
           Y++G G+   LGHG   D L P  + T +   +  V   +GD   + + +SG V++WG G
Sbjct: 221 YTWGRGNYGRLGHGNFDDVLTPTLVTTLKGHTVVHVACGSGDSQTLCVTASGIVFSWGDG 280

Query: 351 YCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFP 410
             G LG G       P+ +  L     V+V    + +  L   G VY +G      LG  
Sbjct: 281 DYGKLGRGGTDGSKTPKIVDKLLDINVVKVFCGGQFSAALTAHGEVYTWGKGDAYRLG-- 338

Query: 411 DRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQL 462
             G  + V  P++++SLR   +  +S G  H + +T+   ++G+G N+  Q+
Sbjct: 339 -HGSEEHVRYPKVIESLRDKKIKDLSVGTTHILALTEDQFVYGWGRNDYGQI 389



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 80/271 (29%), Positives = 126/271 (46%), Gaps = 9/271 (3%)

Query: 170 ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
           A   H   + Q G V++ G+      GH DT      P+L+E+L       +  G  ++ 
Sbjct: 154 ADGKHYLALTQDGCVYSWGNGDGGRLGHGDT-VSYDEPKLIESLLDKNIVFIACGSTYSA 212

Query: 230 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA--AGPSYMLAVTGN 287
            L+  G ++T G   +G+LGHG+  D  TP  +  L+   +VV +A  +G S  L VT +
Sbjct: 213 ALSASGELYTWGRGNYGRLGHGNFDDVLTPTLVTTLKG-HTVVHVACGSGDSQTLCVTAS 271

Query: 288 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 347
           G+V+S+G G    LG G       P+ +       I+VV+V  G +   AL + G VYTW
Sbjct: 272 GIVFSWGDGDYGKLGRGGTDGSKTPKIVDKLL--DINVVKVFCGGQFSAALTAHGEVYTW 329

Query: 348 GKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSL 407
           GKG    LGHG E     P+ + SL+      +         L +   VYG+G   +G +
Sbjct: 330 GKGDAYRLGHGSEEHVRYPKVIESLRDKKIKDLSVGTTHILALTEDQFVYGWGRNDYGQI 389

Query: 408 GFPDRGVSDKVLRPRILDSLRAHHVSQISTG 438
              D  +   V  P +  +L +  V  +++G
Sbjct: 390 ---DPTLGPVVSEPTLCPTLSSKTVIGLASG 417



 Score = 96.7 bits (239), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 82/286 (28%), Positives = 136/286 (47%), Gaps = 20/286 (6%)

Query: 119 GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
           G+++  L  +  V+S G+   G LGHG +T        I      ++V ++    ++A +
Sbjct: 156 GKHYLALTQDGCVYSWGNGDGGRLGHG-DTVSYDEPKLIESLLDKNIVFIACGSTYSAAL 214

Query: 179 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT--AGLNFTGFLTIRGH 236
             SG+++T G  +    GH + +  +  P LV  LKG     V   +G + T  +T  G 
Sbjct: 215 SASGELYTWGRGNYGRLGHGNFDD-VLTPTLVTTLKGHTVVHVACGSGDSQTLCVTASGI 273

Query: 237 VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 296
           V + G   +G+LG G T    TPK +  L ++ +VV++  G  +  A+T +G VY++G G
Sbjct: 274 VFSWGDGDYGKLGRGGTDGSKTPKIVDKLLDI-NVVKVFCGGQFSAALTAHGEVYTWGKG 332

Query: 297 SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 356
             + LGHG +     P+ I++ R K I    +S G  H++AL    +VY WG+   G   
Sbjct: 333 DAYRLGHGSEEHVRYPKVIESLRDKKIK--DLSVGTTHILALTEDQFVYGWGRNDYG--- 387

Query: 357 HGDEIDKTLPEPLSSLKSHLAVQVCAR-KRKTFVLVDTGSVYGFGW 401
              +ID TL   +S         +C     KT + + +G    F W
Sbjct: 388 ---QIDPTLGPVVSE------PTLCPTLSSKTVIGLASGPTQSFAW 424



 Score = 95.5 bits (236), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 69/244 (28%), Positives = 116/244 (47%), Gaps = 10/244 (4%)

Query: 237  VHTCGSNTHGQLG--HGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 294
            V+  G N   QLG   G  +  P    +  L ++  +  IA G   +  V+  G +Y+ G
Sbjct: 2591 VYVWGLNDKDQLGGLKGSKIKLPIYSEV--LSKLKPI-HIAGGSKTLFIVSQEGKLYACG 2647

Query: 295  SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGA 354
             G+N  LG G+ ++  +P+AI    +  I  V V +G +H +AL   G V++WG+G  G 
Sbjct: 2648 EGTNGRLGLGDDNNVCEPKAIPFLSQFVIKKVAVHSGGKHALALTQDGKVFSWGEGEDGK 2707

Query: 355  LGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGV 414
            LGHG+ I    P+ +  LKS     +      +  +   G +Y +G   +G LG  D   
Sbjct: 2708 LGHGNCISLDKPKLIEILKSKRIRDIACGSGHSAAIASNGELYTWGLGEYGRLGHGD--- 2764

Query: 415  SDKVLRPRILDSLRAHHVSQISTGL--YHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLE 472
            +    RP+++ +L    V Q++ G     T+ +T  G ++ +GD +  +LG     GC  
Sbjct: 2765 TITQTRPKLVQALVGQRVVQVACGSRDAQTMALTTDGCVYSWGDGDFGKLGRGGSDGCYT 2824

Query: 473  PTEI 476
            P  +
Sbjct: 2825 PLAV 2828



 Score = 77.4 bits (189), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 61/218 (27%), Positives = 98/218 (44%), Gaps = 16/218 (7%)

Query: 258 TPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQT 317
           TP    P+  +G + Q+      ++ ++ NG  Y+   GS          +   P  +  
Sbjct: 93  TPFYCDPIAGLG-IKQLCCTERSLMILSLNGNAYNMYHGS----------ETQYPLRVHG 141

Query: 318 FRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLA 377
           F  K I ++   A  +H +AL   G VY+WG G  G LGHGD +    P+ + SL     
Sbjct: 142 FSDKPITMIASHADGKHYLALTQDGCVYSWGNGDGGRLGHGDTVSYDEPKLIESLLDKNI 201

Query: 378 VQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS- 436
           V +      +  L  +G +Y +G   +G LG    G  D VL P ++ +L+ H V  ++ 
Sbjct: 202 VFIACGSTYSAALSASGELYTWGRGNYGRLG---HGNFDDVLTPTLVTTLKGHTVVHVAC 258

Query: 437 -TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEP 473
            +G   T+ VT  G +F +GD +  +LG     G   P
Sbjct: 259 GSGDSQTLCVTASGIVFSWGDGDYGKLGRGGTDGSKTP 296



 Score = 39.7 bits (91), Expect = 3.7,   Method: Compositional matrix adjust.
 Identities = 28/108 (25%), Positives = 49/108 (45%), Gaps = 9/108 (8%)

Query: 367 EPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDS 426
           +P++ + SH      A  +    L   G VY +G    G LG  D    D+   P++++S
Sbjct: 145 KPITMIASH------ADGKHYLALTQDGCVYSWGNGDGGRLGHGDTVSYDE---PKLIES 195

Query: 427 LRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPT 474
           L   ++  I+ G  ++  ++  G L+ +G     +LGH      L PT
Sbjct: 196 LLDKNIVFIACGSTYSAALSASGELYTWGRGNYGRLGHGNFDDVLTPT 243



 Score = 38.9 bits (89), Expect = 5.8,   Method: Compositional matrix adjust.
 Identities = 20/69 (28%), Positives = 33/69 (47%)

Query: 332  DEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 391
            ++  ++ D SG +Y WG  + G LG  +     LP P  SL +   +Q+   ++  F + 
Sbjct: 3560 EDWTLSWDGSGAIYGWGHNHRGQLGGLEGPKVKLPAPCESLSALRPIQLAGGEQTLFAVT 3619

Query: 392  DTGSVYGFG 400
              G VY  G
Sbjct: 3620 ADGKVYSTG 3628


>gi|224053260|ref|XP_002297742.1| predicted protein [Populus trichocarpa]
 gi|222845000|gb|EEE82547.1| predicted protein [Populus trichocarpa]
          Length = 1063

 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 92/315 (29%), Positives = 152/315 (48%), Gaps = 22/315 (6%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V  ++    HAA V + G+VF+ G+      GH   +  +  P+ V+ LK    + V  G
Sbjct: 273 VQAIACGRQHAALVTKQGEVFSWGEELGGRLGH-GVDSDVSHPKFVDGLKNFNVELVACG 331

Query: 225 LNFTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSYM 281
              +  +T+ G ++  G N +  G LG G    +  P+ ++ PLE +  V  ++ GP + 
Sbjct: 332 EYLSCAVTLSGDLYIWGGNAYNFGLLGCGSEATQWVPRKLSGPLEGI-HVSSVSCGPWHT 390

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL--- 338
             VT  G +++FG G+   LGHG++     PR +++   KG+  +RV+ G  H  A+   
Sbjct: 391 AVVTSAGQLFTFGDGTFGVLGHGDRSSVSTPREVESL--KGLRTMRVACGVWHTAAVVEV 448

Query: 339 ---------DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFV 389
                     SSG ++TWG G  G LGHGD+  + +P  +++L      QV      T  
Sbjct: 449 MVGSSSSSNCSSGKLFTWGDGDKGRLGHGDKEARLVPTYVATLVEPSFCQVACGHSLTVA 508

Query: 390 LVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRG 449
           L  +G VY  G   +G LG P    +D  +  R+   L  + V +++ G YH  V+T R 
Sbjct: 509 LTTSGQVYTMGSPVYGQLGNPQ---ADGKVPTRVEGKLMKNFVEELACGAYHVAVLTSRT 565

Query: 450 RLFGFGDNERAQLGH 464
            ++ +G     +LGH
Sbjct: 566 EVYTWGKGANGRLGH 580



 Score =  111 bits (277), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 89/246 (36%), Positives = 116/246 (47%), Gaps = 16/246 (6%)

Query: 140 GVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRD 199
           G+LG G E TQ V           HV  VS    H A V  +GQ+FT GD +    GH D
Sbjct: 355 GLLGCGSEATQWVPRKLSGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGD 414

Query: 200 TNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT------------IRGHVHTCGSNTHGQ 247
            +  +  PR VE+LKG+   +V  G+  T  +               G + T G    G+
Sbjct: 415 RSS-VSTPREVESLKGLRTMRVACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDKGR 473

Query: 248 LGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH 307
           LGHGD   R  P  +A L E  S  Q+A G S  +A+T +G VY+ GS     LG+  Q 
Sbjct: 474 LGHGDKEARLVPTYVATLVEP-SFCQVACGHSLTVALTTSGQVYTMGSPVYGQLGN-PQA 531

Query: 308 DELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPE 367
           D   P  ++    K   V  ++ G  HV  L S   VYTWGKG  G LGHGD  D+  P 
Sbjct: 532 DGKVPTRVEGKLMKNF-VEELACGAYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPS 590

Query: 368 PLSSLK 373
            + +LK
Sbjct: 591 IVEALK 596



 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 85/307 (27%), Positives = 138/307 (44%), Gaps = 27/307 (8%)

Query: 196 GHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLD 255
           G  D     F P+ +E+   +  + +  G      +T +G V + G    G+LGHG   D
Sbjct: 251 GGSDIQMDSFVPKALESAVLLDVQAIACGRQHAALVTKQGEVFSWGEELGGRLGHGVDSD 310

Query: 256 RPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS-NF-CLGHGEQHDELQPR 313
              PK +  L+   +V  +A G     AVT +G +Y +G  + NF  LG G +  +  PR
Sbjct: 311 VSHPKFVDGLKNF-NVELVACGEYLSCAVTLSGDLYIWGGNAYNFGLLGCGSEATQWVPR 369

Query: 314 AIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
            + +   +GIHV  VS G  H   + S+G ++T+G G  G LGHGD    + P  + SLK
Sbjct: 370 KL-SGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRSSVSTPREVESLK 428

Query: 374 SHLAVQVCARKRKTFVLVDT------------GSVYGFGWMGFGSLGFPDRGVSDKVLRP 421
               ++V      T  +V+             G ++ +G    G LG  D+   +  L P
Sbjct: 429 GLRTMRVACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDKGRLGHGDK---EARLVP 485

Query: 422 RILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI----- 476
             + +L      Q++ G   TV +T  G+++  G     QLG+    G + PT +     
Sbjct: 486 TYVATLVEPSFCQVACGHSLTVALTTSGQVYTMGSPVYGQLGNPQADGKV-PTRVEGKLM 544

Query: 477 --FIQEM 481
             F++E+
Sbjct: 545 KNFVEEL 551



 Score = 86.3 bits (212), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 99/353 (28%), Positives = 146/353 (41%), Gaps = 38/353 (10%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRI-----NFPSAAHVVQVS 169
           I  GR H  L++    VFS G  L G LGHG ++   VS  +      NF    +V  V+
Sbjct: 276 IACGRQHAALVTKQGEVFSWGEELGGRLGHGVDSD--VSHPKFVDGLKNF----NVELVA 329

Query: 170 ASENHAAFVLQSGQVFTCGDNSS----FCCGHRDTNRPIFRPR-LVEALKGVPCKQVTAG 224
             E  +  V  SG ++  G N+       CG   T    + PR L   L+G+    V+ G
Sbjct: 330 CGEYLSCAVTLSGDLYIWGGNAYNFGLLGCGSEATQ---WVPRKLSGPLEGIHVSSVSCG 386

Query: 225 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 284
              T  +T  G + T G  T G LGHGD     TP+ +  L+ +   +++A G  +  AV
Sbjct: 387 PWHTAVVTSAGQLFTFGDGTFGVLGHGDRSSVSTPREVESLKGL-RTMRVACGVWHTAAV 445

Query: 285 T------------GNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGD 332
                         +G ++++G G    LGHG++   L P  + T         +V+ G 
Sbjct: 446 VEVMVGSSSSSNCSSGKLFTWGDGDKGRLGHGDKEARLVPTYVATLVEPSF--CQVACGH 503

Query: 333 EHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVD 392
              VAL +SG VYT G    G LG+     K        L  +   ++        VL  
Sbjct: 504 SLTVALTTSGQVYTMGSPVYGQLGNPQADGKVPTRVEGKLMKNFVEELACGAYHVAVLTS 563

Query: 393 TGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVV 445
              VY +G    G LG  D   +D    P I+++L+   V  I  G   T  +
Sbjct: 564 RTEVYTWGKGANGRLGHGD---TDDRNFPSIVEALKDKQVKGIICGTSFTAAI 613



 Score = 49.7 bits (117), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 53/194 (27%), Positives = 83/194 (42%), Gaps = 12/194 (6%)

Query: 92  RVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQC 151
           R +R    V H++ +VE       +  G   +   S+  +F+ G    G LGHG +  + 
Sbjct: 431 RTMRVACGVWHTAAVVE-------VMVGSSSSSNCSSGKLFTWGDGDKGRLGHGDKEARL 483

Query: 152 VSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVE 211
           V  T +         QV+   +    +  SGQV+T G       G+   +  +  P  VE
Sbjct: 484 VP-TYVATLVEPSFCQVACGHSLTVALTTSGQVYTMGSPVYGQLGNPQADGKV--PTRVE 540

Query: 212 A-LKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS 270
             L     +++  G      LT R  V+T G   +G+LGHGDT DR  P  +  L++   
Sbjct: 541 GKLMKNFVEELACGAYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSIVEALKD-KQ 599

Query: 271 VVQIAAGPSYMLAV 284
           V  I  G S+  A+
Sbjct: 600 VKGIICGTSFTAAI 613



 Score = 38.5 bits (88), Expect = 7.4,   Method: Compositional matrix adjust.
 Identities = 36/125 (28%), Positives = 61/125 (48%), Gaps = 5/125 (4%)

Query: 115 QITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ-VSASE 172
           Q+  G   T+ ++ S  V++ GS + G LG+ P+    V  TR+      + V+ ++   
Sbjct: 498 QVACGHSLTVALTTSGQVYTMGSPVYGQLGN-PQADGKVP-TRVEGKLMKNFVEELACGA 555

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            H A +    +V+T G  ++   GH DT+   F P +VEALK    K +  G +FT  + 
Sbjct: 556 YHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNF-PSIVEALKDKQVKGIICGTSFTAAIC 614

Query: 233 IRGHV 237
           +   V
Sbjct: 615 LHKWV 619


>gi|114657534|ref|XP_001174017.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 isoform 1 [Pan
            troglodytes]
 gi|410226250|gb|JAA10344.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
            RCC1 (CHC1)-like domain (RLD) 1 [Pan troglodytes]
 gi|410226252|gb|JAA10345.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
            RCC1 (CHC1)-like domain (RLD) 1 [Pan troglodytes]
 gi|410263976|gb|JAA19954.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
            RCC1 (CHC1)-like domain (RLD) 1 [Pan troglodytes]
 gi|410293838|gb|JAA25519.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
            RCC1 (CHC1)-like domain (RLD) 1 [Pan troglodytes]
 gi|410293840|gb|JAA25520.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
            RCC1 (CHC1)-like domain (RLD) 1 [Pan troglodytes]
 gi|410336799|gb|JAA37346.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
            RCC1 (CHC1)-like domain (RLD) 1 [Pan troglodytes]
          Length = 4861

 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 103/339 (30%), Positives = 166/339 (48%), Gaps = 17/339 (5%)

Query: 115  QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQV---SA 170
            Q+  G+  T +I +N +V +CG    G LG G      V  T I+      V Q+     
Sbjct: 4031 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHV-LTVISALQGFVVTQLVTSCG 4089

Query: 171  SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
            S+ H+  + +SG+VF+ GD      GH +++R   RPR +EAL+G    Q++ G   +  
Sbjct: 4090 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQMSCGFKHSAV 4148

Query: 231  LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSVVQIAAGPSYMLAVTGNG 288
            +T  G + T G+  +G+LG G+T ++  P+ +  LE  ++G   Q+A G ++ LAV+ +G
Sbjct: 4149 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIG---QVACGLNHTLAVSVDG 4205

Query: 289  -VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 347
             +V++FG G    LG G    +  P+ I      GI + +V+ G +  VAL   G+VYT+
Sbjct: 4206 SMVWAFGDGDYGKLGLGNSTAKSSPQKIDVL--CGIGIKKVACGTQFSVALTKDGHVYTF 4263

Query: 348  GKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSL 407
            G+     L  G   +   P+ +  L   +   V      T  L   G VY +G    G L
Sbjct: 4264 GQDRLIGLPEGRARNHNRPQQIPVLAGVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQL 4323

Query: 408  GFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT 446
            G    G ++ V  P ++  L+  +V QIS G  H+   T
Sbjct: 4324 GL---GHTNHVREPTLVTGLQGKNVRQISAGRCHSAAWT 4359



 Score =  109 bits (273), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 105/379 (27%), Positives = 165/379 (43%), Gaps = 29/379 (7%)

Query: 96  FLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFT 155
           F +    +SD   T A    I TG    ++     V+  GS+    L  G   TQ     
Sbjct: 340 FEEVCRMASDYSRTCASPDSIQTGDA-PIVSETCEVYVWGSNSSHQLVEG---TQEKILQ 395

Query: 156 RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTN------RPIFRPRL 209
               PS +    + A +     +   G V  CG  S    G  D+N      +  F P  
Sbjct: 396 PKLAPSFSDAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPH- 454

Query: 210 VEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG 269
             ++K V   + + G   T   T  G V + G   +G+LGHG++  +  PK I    +  
Sbjct: 455 -RSIKKVSSSKGSDG--HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGK 511

Query: 270 SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS 329
            VV ++AG  +  AVT +G +Y++G G    LGHG+ +     R I T  +   +V  VS
Sbjct: 512 VVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNS----RNIPTLVKDISNVGEVS 567

Query: 330 AGDEHVVALDSSGY-VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTF 388
            G  H +AL   G  V+++G G  G LGHGD      P+ + +L+     +VCA  + + 
Sbjct: 568 CGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSL 627

Query: 389 VLVDTGSVYGFG---WMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVV 445
            L  TG VY +G    +G GS            LRP++++ L A  +  +S G  H + +
Sbjct: 628 ALTSTGQVYAWGCGACLGCGS-------SEATALRPKLIEELAATRIVDVSIGDSHCLAL 680

Query: 446 TDRGRLFGFGDNERAQLGH 464
           +    ++ +G+N   Q G 
Sbjct: 681 SHDNEVYAWGNNSMGQCGQ 699



 Score = 99.0 bits (245), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 91/266 (34%), Positives = 128/266 (48%), Gaps = 14/266 (5%)

Query: 122 HTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
           HTL   +   VFS G    G LGHG  +TQ              VV VSA   H+A V +
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528

Query: 181 SGQVFTCGDNSSFCCGHRDTN-RPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH-VH 238
            G+++T G+      GH D+N R I  P LV+ +  V   +V+ G + T  L+  G  V 
Sbjct: 529 DGELYTWGEGDFGRLGHGDSNSRNI--PTLVKDISNV--GEVSCGSSHTIALSKDGRTVW 584

Query: 239 TCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
           + G   +G+LGHGDT     PK I  L+ +  + ++ AG    LA+T  G VY++G G+ 
Sbjct: 585 SFGGGDNGKLGHGDTNRVYKPKVIEALQGM-FIRKVCAGSQSSLALTSTGQVYAWGCGA- 642

Query: 299 FCLGHG-EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 357
            CLG G  +   L+P+ I+        +V VS GD H +AL     VY WG    G  G 
Sbjct: 643 -CLGCGSSEATALRPKLIEEL--AATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQ 699

Query: 358 GDEIDK-TLPEPLSSLKSHLAVQVCA 382
           G+     T P+ +S L      Q+ A
Sbjct: 700 GNSTGPITKPKKVSGLDGIAIQQISA 725



 Score = 96.3 bits (238), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 87/320 (27%), Positives = 147/320 (45%), Gaps = 13/320 (4%)

Query: 160  PSAAHVVQVSASENHAAFVLQS-GQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPC 218
            PS +   QV   +N   FV+Q+ G V  CG+ S    G  +++  +    ++ AL+G   
Sbjct: 4024 PSFSQAQQVICGQN-CTFVIQANGTVLACGEGSYGRLGQGNSDD-LHVLTVISALQGFVV 4081

Query: 219  KQVTAGLNFTGF---LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA 275
             Q+       G    LT  G V + G   +G+LGHG++  +  P+ I  L+    VVQ++
Sbjct: 4082 TQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQG-EEVVQMS 4140

Query: 276  AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHV 335
             G  +   VT +G +++FG+G    LG G   ++  P  +     +G  + +V+ G  H 
Sbjct: 4141 CGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTAL--EGYQIGQVACGLNHT 4198

Query: 336  VALDSSG-YVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 394
            +A+   G  V+ +G G  G LG G+   K+ P+ +  L      +V    + +  L   G
Sbjct: 4199 LAVSVDGSMVWAFGDGDYGKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDG 4258

Query: 395  SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 454
             VY FG      +G P+ G +    RP+ +  L    +  ++ G  HT+ +   G ++ +
Sbjct: 4259 HVYTFGQDRL--IGLPE-GRARNHNRPQQIPVLAGVIIEDVAVGAEHTLALASNGDVYAW 4315

Query: 455  GDNERAQLGHDTLRGCLEPT 474
            G N   QLG        EPT
Sbjct: 4316 GSNSEGQLGLGHTNHVREPT 4335



 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 68/230 (29%), Positives = 108/230 (46%), Gaps = 11/230 (4%)

Query: 237  VHTCGSNTHGQLGH-GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 295
            V+  G+  HGQL   G  +  P   + AP        Q+  G +    +  NG V + G 
Sbjct: 3999 VYLWGAGRHGQLAEAGRNVMVP---AAAP--SFSQAQQVICGQNCTFVIQANGTVLACGE 4053

Query: 296  GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG-DEHVVALDSSGYVYTWGKGYCGA 354
            GS   LG G   D      I   +   +  +  S G D H +AL  SG V++WG G  G 
Sbjct: 4054 GSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGK 4113

Query: 355  LGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGV 414
            LGHG+   +  P  + +L+    VQ+    + + V+   G ++ FG   +G LG  +   
Sbjct: 4114 LGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN--T 4171

Query: 415  SDKVLRPRILDSLRAHHVSQISTGLYHTVVVT-DRGRLFGFGDNERAQLG 463
            S+K L P  + +L  + + Q++ GL HT+ V+ D   ++ FGD +  +LG
Sbjct: 4172 SNKKL-PERVTALEGYQIGQVACGLNHTLAVSVDGSMVWAFGDGDYGKLG 4220



 Score = 49.3 bits (116), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 29/100 (29%), Positives = 48/100 (48%), Gaps = 2/100 (2%)

Query: 125 LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQV 184
           L S   V++ G   C  LG G      +    I   +A  +V VS  ++H   +    +V
Sbjct: 629 LTSTGQVYAWGCGAC--LGCGSSEATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEV 686

Query: 185 FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           +  G+NS   CG  ++  PI +P+ V  L G+  +Q++AG
Sbjct: 687 YAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAG 726



 Score = 49.3 bits (116), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 41/143 (28%), Positives = 67/143 (46%), Gaps = 9/143 (6%)

Query: 344  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 403
            VY WG G  G L    E  + +  P ++     A QV   +  TFV+   G+V   G   
Sbjct: 3999 VYLWGAGRHGQLA---EAGRNVMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGS 4055

Query: 404  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLY---HTVVVTDRGRLFGFGDNERA 460
            +G LG   +G SD +    ++ +L+   V+Q+ T      H++ +T+ G +F +GD +  
Sbjct: 4056 YGRLG---QGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYG 4112

Query: 461  QLGHDTLRGCLEPTEIFIQEMEE 483
            +LGH        P +I   + EE
Sbjct: 4113 KLGHGNSDRQRRPRQIEALQGEE 4135


>gi|431917309|gb|ELK16842.1| Putative E3 ubiquitin-protein ligase HERC2 [Pteropus alecto]
          Length = 3660

 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 92/286 (32%), Positives = 140/286 (48%), Gaps = 10/286 (3%)

Query: 183  QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 242
            +VF  G N     G    ++ I  P   E L  +   QV  G      +T+ G V+ CG 
Sbjct: 1795 KVFVWGLNDKDQLGGLKGSK-IKVPSFSETLSALNAVQVAGGSKSLFAVTVEGKVYACGE 1853

Query: 243  NTHGQLGHG-DTLDRPTPKSIAPLEE-VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 300
             T+G+LG G  +   P P+ +  L   V   V + +G  +  A+T +G V+S+G G +  
Sbjct: 1854 ATNGRLGLGVSSGTVPVPRQVTALSSYVVKKVAVHSGGRHATALTADGKVFSWGEGDDGK 1913

Query: 301  LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 360
            LGH  + +  +PR I+  + + I    ++ G  H  AL SSG +YTWG G  G LGHGD 
Sbjct: 1914 LGHFSRXNCDKPRLIEALKSRRIR--DIACGSSHSAALTSSGELYTWGLGEYGRLGHGDN 1971

Query: 361  IDKTLPEPLSSLKSHLAVQVC--ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKV 418
              +  P+ +  L  H  VQV   +R  +T  L D G V+ +G   FG LG   RG S+  
Sbjct: 1972 TTQLKPKMVKVLVGHRVVQVACGSRDAQTLALTDEGLVFSWGDGDFGKLG---RGGSEGC 2028

Query: 419  LRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 464
              P+ ++ L    V QI  G   ++ +T  G ++ +G  +  +LGH
Sbjct: 2029 NVPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGH 2074



 Score =  125 bits (314), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 94/326 (28%), Positives = 157/326 (48%), Gaps = 12/326 (3%)

Query: 161  SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQ 220
            SA + VQV+        V   G+V+ CG+ ++   G   ++  +  PR V AL     K+
Sbjct: 1825 SALNAVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGVSSGTVPVPRQVTALSSYVVKK 1884

Query: 221  VT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGP 278
            V   +G      LT  G V + G    G+LGH    +   P+ I  L+    +  IA G 
Sbjct: 1885 VAVHSGGRHATALTADGKVFSWGEGDDGKLGHFSRXNCDKPRLIEALKS-RRIRDIACGS 1943

Query: 279  SYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEHVV 336
            S+  A+T +G +Y++G G    LGHG+   +L+P+ ++     G  VV+V+ G  D   +
Sbjct: 1944 SHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVL--VGHRVVQVACGSRDAQTL 2001

Query: 337  ALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSV 396
            AL   G V++WG G  G LG G      +P+ +  L      Q+    + +  L  +G V
Sbjct: 2002 ALTDEGLVFSWGDGDFGKLGRGGSEGCNVPQNIERLNGQGVCQIECGAQFSLALTKSGVV 2061

Query: 397  YGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGD 456
            + +G   +  LG    G    V +P++++ LR   +  ++ G  H + VTD G+++ +GD
Sbjct: 2062 WTWGKGDYFRLG---HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGD 2118

Query: 457  NERAQLGHDTLRGCLEPTEIFIQEME 482
            N+  Q G+ T     +PT   +Q +E
Sbjct: 2119 NDHGQQGNGTTTVNRKPT--LVQGLE 2142



 Score =  122 bits (306), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 83/269 (30%), Positives = 132/269 (49%), Gaps = 6/269 (2%)

Query: 207  PRLVEALKGVPCKQV--TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP 264
            P L+E+++ V  K+V   +G      L+  G V++ G    G+LGHG+      P+ I  
Sbjct: 2864 PTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIES 2923

Query: 265  LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH 324
            L  +  VV +AAG ++   VT  G +Y++G G    LGH +  D+L+P+ ++  +   + 
Sbjct: 2924 LRGI-EVVDVAAGGAHSACVTAAGGLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVV 2982

Query: 325  VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARK 384
             V   +GD   + L     V++WG G  G LG G      +P  + +L    AV+V    
Sbjct: 2983 DVACGSGDAQTLCLTEDDTVWSWGDGDYGKLGRGGSDGCKVPMKVDALTGLGAVKVECGS 3042

Query: 385  RKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV 444
            + +  L  +G+VY +G   +  LG    G  D V RPR +  L+   V  I+TG  H V 
Sbjct: 3043 QFSVALTKSGAVYTWGKGDYHRLG---HGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 3099

Query: 445  VTDRGRLFGFGDNERAQLGHDTLRGCLEP 473
             T+ G ++ +GDN+  QLG  T      P
Sbjct: 3100 CTEDGEVYTWGDNDEGQLGDGTTNAIQRP 3128



 Score =  118 bits (295), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 83/280 (29%), Positives = 137/280 (48%), Gaps = 9/280 (3%)

Query: 166  VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 225
            V V++   H   +   G+V++ G+      GH + + P  RPR++E+L+G+    V AG 
Sbjct: 2878 VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRS-PCDRPRVIESLRGIEVVDVAAGG 2936

Query: 226  NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA--AGPSYMLA 283
              +  +T  G ++T G   +G+LGH D+ D+  PK +  L+    VV +A  +G +  L 
Sbjct: 2937 AHSACVTAAGGLYTWGKGRYGRLGHSDSEDQLKPKLVEALQG-HRVVDVACGSGDAQTLC 2995

Query: 284  VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 343
            +T +  V+S+G G    LG G       P  +      G+  V+V  G +  VAL  SG 
Sbjct: 2996 LTEDDTVWSWGDGDYGKLGRGGSDGCKVPMKVDAL--TGLGAVKVECGSQFSVALTKSGA 3053

Query: 344  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 403
            VYTWGKG    LGHG +     P  +  L+    + +           + G VY +G   
Sbjct: 3054 VYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDND 3113

Query: 404  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV 443
             G LG    G ++ + RPR++ +L+   V++++ G  HT+
Sbjct: 3114 EGQLG---DGTTNAIQRPRLVAALQGKKVNRVACGSAHTL 3150



 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 78/242 (32%), Positives = 116/242 (47%), Gaps = 7/242 (2%)

Query: 119  GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
            GR+ T L ++  VFS G    G LGH      C     I    +  +  ++   +H+A +
Sbjct: 1891 GRHATALTADGKVFSWGEGDDGKLGHF-SRXNCDKPRLIEALKSRRIRDIACGSSHSAAL 1949

Query: 179  LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN--FTGFLTIRGH 236
              SG+++T G       GH D N    +P++V+ L G    QV  G     T  LT  G 
Sbjct: 1950 TSSGELYTWGLGEYGRLGHGD-NTTQLKPKMVKVLVGHRVVQVACGSRDAQTLALTDEGL 2008

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 296
            V + G    G+LG G +     P++I  L   G V QI  G  + LA+T +GVV+++G G
Sbjct: 2009 VFSWGDGDFGKLGRGGSEGCNVPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTWGKG 2067

Query: 297  SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 356
              F LGHG      +P+ ++  R  G  +V V+ G  H +A+  +G VY WG    G  G
Sbjct: 2068 DYFRLGHGSDVHVRKPQVVEGLR--GKKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQG 2125

Query: 357  HG 358
            +G
Sbjct: 2126 NG 2127



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 83/265 (31%), Positives = 126/265 (47%), Gaps = 12/265 (4%)

Query: 96   FLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFT 155
             L+S++H    ++  A N   + G++   L S   V+S G +  G LGHG   + C    
Sbjct: 2866 LLESIQHV--FIKKVAVN---SGGKHCLALSSEGEVYSWGEAEDGKLGHG-NRSPCDRPR 2919

Query: 156  RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 215
             I       VV V+A   H+A V  +G ++T G       GH D+   + +P+LVEAL+G
Sbjct: 2920 VIESLRGIEVVDVAAGGAHSACVTAAGGLYTWGKGRYGRLGHSDSEDQL-KPKLVEALQG 2978

Query: 216  VPCKQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
                 V   +G   T  LT    V + G   +G+LG G +     P  +  L  +G+ V+
Sbjct: 2979 HRVVDVACGSGDAQTLCLTEDDTVWSWGDGDYGKLGRGGSDGCKVPMKVDALTGLGA-VK 3037

Query: 274  IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
            +  G  + +A+T +G VY++G G    LGHG      +PR +Q    +G  V+ ++ G  
Sbjct: 3038 VECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGL--QGKKVIAIATGSL 3095

Query: 334  HVVALDSSGYVYTWGKGYCGALGHG 358
            H V     G VYTWG    G LG G
Sbjct: 3096 HCVCCTEDGEVYTWGDNDEGQLGDG 3120



 Score = 97.4 bits (241), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 74/247 (29%), Positives = 124/247 (50%), Gaps = 12/247 (4%)

Query: 235  GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
            G V+  G N  GQLG   G  +  PTP +++A L       Q+  G   + AVT +G +Y
Sbjct: 2788 GTVYGWGHNHRGQLGGVEGAKVKVPTPCEALAALRPA----QLIGGEQTLFAVTADGKLY 2843

Query: 292  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 351
            + G G+   LG G       P  +++ +   I  V V++G +H +AL S G VY+WG+  
Sbjct: 2844 ATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAE 2903

Query: 352  CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 411
             G LGHG+      P  + SL+    V V A    +  +   G +Y +G   +G LG  D
Sbjct: 2904 DGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGGLYTWGKGRYGRLGHSD 2963

Query: 412  RGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG 469
               S+  L+P+++++L+ H V  ++  +G   T+ +T+   ++ +GD +  +LG     G
Sbjct: 2964 ---SEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTEDDTVWSWGDGDYGKLGRGGSDG 3020

Query: 470  CLEPTEI 476
            C  P ++
Sbjct: 3021 CKVPMKV 3027



 Score = 52.4 bits (124), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 48/167 (28%), Positives = 75/167 (44%), Gaps = 4/167 (2%)

Query: 118  TGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
            +G   TL L  + +V+S G    G LG G  +  C    +++  +    V+V      + 
Sbjct: 2988 SGDAQTLCLTEDDTVWSWGDGDYGKLGRG-GSDGCKVPMKVDALTGLGAVKVECGSQFSV 3046

Query: 177  FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
             + +SG V+T G       GH   +  + RPR V+ L+G     +  G       T  G 
Sbjct: 3047 ALTKSGAVYTWGKGDYHRLGHGSDDH-VRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGE 3105

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
            V+T G N  GQLG G T     P+ +A L+    V ++A G ++ LA
Sbjct: 3106 VYTWGDNDEGQLGDGTTNAIQRPRLVAALQG-KKVNRVACGSAHTLA 3151



 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 36/147 (24%), Positives = 70/147 (47%), Gaps = 5/147 (3%)

Query: 332  DEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 391
            D+  ++   SG VY WG  + G LG  +     +P P  +L +    Q+   ++  F + 
Sbjct: 2778 DDWTLSAGGSGTVYGWGHNHRGQLGGVEGAKVKVPTPCEALAALRPAQLIGGEQTLFAVT 2837

Query: 392  DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRG 449
              G +Y     G+G+ G    G ++ V  P +L+S++   + +++  +G  H + ++  G
Sbjct: 2838 ADGKLYA---TGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 2894

Query: 450  RLFGFGDNERAQLGHDTLRGCLEPTEI 476
             ++ +G+ E  +LGH     C  P  I
Sbjct: 2895 EVYSWGEAEDGKLGHGNRSPCDRPRVI 2921



 Score = 48.1 bits (113), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 43/139 (30%), Positives = 66/139 (47%), Gaps = 12/139 (8%)

Query: 344  VYTWGKGYCGALG--HGDEID-KTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 400
            V+ WG      LG   G +I   +  E LS+L    AVQV    +  F +   G VY  G
Sbjct: 1796 VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALN---AVQVAGGSKSLFAVTVEGKVYACG 1852

Query: 401  WMGFGSLGFPDRGVSD-KVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDN 457
                G LG    GVS   V  PR + +L ++ V +++  +G  H   +T  G++F +G+ 
Sbjct: 1853 EATNGRLGL---GVSSGTVPVPRQVTALSSYVVKKVAVHSGGRHATALTADGKVFSWGEG 1909

Query: 458  ERAQLGHDTLRGCLEPTEI 476
            +  +LGH +   C +P  I
Sbjct: 1910 DDGKLGHFSRXNCDKPRLI 1928


>gi|405355587|ref|ZP_11024762.1| hypothetical protein A176_0896 [Chondromyces apiculatus DSM 436]
 gi|397091294|gb|EJJ22112.1| hypothetical protein A176_0896 [Myxococcus sp. (contaminant ex DSM
           436)]
          Length = 1473

 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 113/352 (32%), Positives = 160/352 (45%), Gaps = 20/352 (5%)

Query: 114 MQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           M+I  G  H+L ++   +V++ G +  G LG    + Q +S  R+  P    +V V + +
Sbjct: 69  MRIAAGAQHSLFLTPTGAVWAWGGNSAGQLGGADTSFQRLSPARL--PVLEDIVSVVSGD 126

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            H+  +   G V+T G NSS   G   T      P+ VE    V    V AG   +  L 
Sbjct: 127 AHSLALGADGTVWTWGSNSSGQLGD-GTTTDRAEPQRVEGFTDVVA--VAAGDFHSLVLK 183

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
             G V   G+N HGQLG G T     PK +  LE    VV +AAG  + LAV  +G V S
Sbjct: 184 SDGTVWAWGTNFHGQLGQGHTQTGLWPKPVPGLE---GVVALAAGFDFTLAVHADGAVSS 240

Query: 293 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 352
           +G+ S   LG G     L P  I T       +  V+AG  H VAL   G V+TWG    
Sbjct: 241 WGANSFGQLGLGTFTQRLSPERIPTLS----GITSVAAGTYHAVALGKDGTVWTWGSNSS 296

Query: 353 GALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDR 412
           G LG G   D+ +P PL  +    A  V +    +  L++ G V  +G    G LG  D 
Sbjct: 297 GQLGDGTWNDRAVPAPLPGVGG--ARAVASLDAGSLALLEGGDVLAWGANNSGQLGDGD- 353

Query: 413 GVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 464
             +D+   P ++  L A  V+ +  G  H + +   G L+ +G     QLGH
Sbjct: 354 -TADRST-PSLVPELSA--VTAVVGGAQHALALRKDGTLWAWGGGLAGQLGH 401



 Score =  119 bits (297), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 111/366 (30%), Positives = 169/366 (46%), Gaps = 22/366 (6%)

Query: 115  QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
            ++  GR H LL+ ++ SV + G++  G LG G  TT       +   S A    V++   
Sbjct: 771  RLAAGRAHALLVRADGSVVAWGANASGQLGDG-GTTHGARAVTVRGVSCAR--SVASGGQ 827

Query: 174  HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
            H+  +   G V+T G+N     G   T+  +  P  VE L+G+    V  G + +  L  
Sbjct: 828  HSLVLACDGTVWTWGENQRGQLGDGTTSARVA-PGRVEGLEGIVA--VAGGGDTSLALRS 884

Query: 234  RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
             G V   G+N  GQ+G G   DR TP+ I  L +V   + IA G S+ LAV  +G V+++
Sbjct: 885  DGTVWAWGANASGQVGDGTVEDRLTPRRIEALSDV---MVIALGESHALAVGEDGTVWAW 941

Query: 294  GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVV-RVSAGDEHVVALDSSGYVYTWGKGYC 352
            G+ ++  LG G +   L P      R KG+  V  V+AG    +A+   G  + WG    
Sbjct: 942  GANASGQLGDGGETPSLLP-----ARVKGLEGVGSVAAGRAFSLAVRDDGTAWAWGANES 996

Query: 353  GALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDR 412
            G LG G    + +P  ++S+K   AV   A       L + G+V+ +G    G LG  D 
Sbjct: 997  GQLGDGSNQSRRVPHRVASVKGLRAVSAGAHH--AMALGEDGAVWAWGDNTLGQLG--DG 1052

Query: 413  GVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLE 472
              +  V+ P+ +  L    V  ++ G   +V V   G  F +G NE  QLG       L 
Sbjct: 1053 TSAFTVMWPQRVAEL--SDVESVAAGEQFSVAVAHDGTAFSWGSNEYGQLGDGKTGPRLS 1110

Query: 473  PTEIFI 478
            P E+ I
Sbjct: 1111 PAEVKI 1116



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 111/369 (30%), Positives = 161/369 (43%), Gaps = 18/369 (4%)

Query: 114  MQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
            M I  G  H L +  + +V++ G++  G LG G ET    S           V  V+A  
Sbjct: 920  MVIALGESHALAVGEDGTVWAWGANASGQLGDGGETP---SLLPARVKGLEGVGSVAAGR 976

Query: 173  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
              +  V   G  +  G N S   G   +N+    P  V ++KG+  + V+AG +    L 
Sbjct: 977  AFSLAVRDDGTAWAWGANESGQLGD-GSNQSRRVPHRVASVKGL--RAVSAGAHHAMALG 1033

Query: 233  IRGHVHTCGSNTHGQLGHGDT-LDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
              G V   G NT GQLG G +      P+ +A L +V SV   AAG  + +AV  +G  +
Sbjct: 1034 EDGAVWAWGDNTLGQLGDGTSAFTVMWPQRVAELSDVESV---AAGEQFSVAVAHDGTAF 1090

Query: 292  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 351
            S+GS     LG G+    L P  ++    K   VV V A  +H VAL + G +  WG   
Sbjct: 1091 SWGSNEYGQLGDGKTGPRLSPAEVKIGGSKARTVVTVGAWGQHAVALMADGTLQAWGDNA 1150

Query: 352  CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 411
             G LG G    ++ P  +  +    AV   A    +  L   G+V+ +G  GFG LG   
Sbjct: 1151 TGQLGDGTTTRRSSPGEIRGVTRVTAVSTGA--WHSLALRLDGTVWAWGANGFGQLG--- 1205

Query: 412  RGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCL 471
             G +     P  +  LR   V  I+ G YH+V V   G ++ +G N   QLG  T     
Sbjct: 1206 DGTTTARAVPVPVQGLR--DVVAIAAGGYHSVAVRSDGTVWTWGYNTFGQLGDGTSESRA 1263

Query: 472  EPTEIFIQE 480
             P ++   E
Sbjct: 1264 LPVQVHKLE 1272



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 87/270 (32%), Positives = 131/270 (48%), Gaps = 18/270 (6%)

Query: 208 RLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDT-LDRPTPKSIAPLE 266
           RL E L   P + + AG   + FLT  G V   G N+ GQLG  DT   R +P  +  LE
Sbjct: 61  RLAEPLS--PMR-IAAGAQHSLFLTPTGAVWAWGGNSAGQLGGADTSFQRLSPARLPVLE 117

Query: 267 EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVV 326
           ++ SVV   +G ++ LA+  +G V+++GS S+  LG G   D  +P+ ++ F      VV
Sbjct: 118 DIVSVV---SGDAHSLALGADGTVWTWGSNSSGQLGDGTTTDRAEPQRVEGF----TDVV 170

Query: 327 RVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRK 386
            V+AGD H + L S G V+ WG  + G LG G       P+P+  L+    V + A    
Sbjct: 171 AVAAGDFHSLVLKSDGTVWAWGTNFHGQLGQGHTQTGLWPKPVPGLEG--VVALAAGFDF 228

Query: 387 TFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT 446
           T  +   G+V  +G   FG LG    G   + L P  + +L    ++ ++ G YH V + 
Sbjct: 229 TLAVHADGAVSSWGANSFGQLGL---GTFTQRLSPERIPTLSG--ITSVAAGTYHAVALG 283

Query: 447 DRGRLFGFGDNERAQLGHDTLRGCLEPTEI 476
             G ++ +G N   QLG  T      P  +
Sbjct: 284 KDGTVWTWGSNSSGQLGDGTWNDRAVPAPL 313



 Score =  109 bits (272), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 123/472 (26%), Positives = 192/472 (40%), Gaps = 89/472 (18%)

Query: 50  PQKFRSLVDLAASQLCALHS--------IYA-GMSRNVQIELLNRCNGNWKRVLRFLQSV 100
           PQ+     D+ A      HS        ++A G + + Q+   +   G W + +  L+ V
Sbjct: 160 PQRVEGFTDVVAVAAGDFHSLVLKSDGTVWAWGTNFHGQLGQGHTQTGLWPKPVPGLEGV 219

Query: 101 EHSSDIVETSAGNMQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINF 159
                        + +  G   TL + ++ +V S G++  G LG G   TQ +S  RI  
Sbjct: 220 -------------VALAAGFDFTLAVHADGAVSSWGANSFGQLGLG-TFTQRLSPERI-- 263

Query: 160 PSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTN-RPIFRPRLVEALKGVPC 218
           P+ + +  V+A   HA  + + G V+T G NSS   G    N R +  P     L GV  
Sbjct: 264 PTLSGITSVAAGTYHAVALGKDGTVWTWGSNSSGQLGDGTWNDRAVPAP-----LPGVGG 318

Query: 219 KQVTAGLNFTGFLTIRG-HVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAG 277
            +  A L+      + G  V   G+N  GQLG GDT DR TP S+ P  E+ +V  +  G
Sbjct: 319 ARAVASLDAGSLALLEGGDVLAWGANNSGQLGDGDTADRSTP-SLVP--ELSAVTAVVGG 375

Query: 278 PSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTF------------------- 318
             + LA+  +G ++++G G    LGHG     + P  +                      
Sbjct: 376 AQHALALRKDGTLWAWGGGLAGQLGHGGSERHVVPATVMGLTNVTSMATGSFHSLAALED 435

Query: 319 --------------------------RRKGIHVVR-VSAGDEHVVALDSSGYVYTWGKGY 351
                                     R  G+  VR V+A   H +A+   G V+TWG+  
Sbjct: 436 GSVWAWGRNSYGQLGDGTVTERHVPVRVPGLPSVRAVAAAGHHSIAVAMDGTVWTWGRNA 495

Query: 352 CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 411
            G LG G   D+  P  +S L S LA  + A       L   G V+ +G+   G LG   
Sbjct: 496 AGQLGDGTTRDRARPVAVSGLTSVLA--IAAGGSHVLALRSDGDVWAWGYNALGQLG--- 550

Query: 412 RGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 463
            G S   L P  +  L    +  ++ G Y ++ + + G ++ +G+    QLG
Sbjct: 551 DGTSGDKLTPVRVPGLAP--IQSVAAGTYFSMALANDGTVWTWGEGFEGQLG 600



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 106/364 (29%), Positives = 169/364 (46%), Gaps = 25/364 (6%)

Query: 116 ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           +  G  H L L  + ++++ G  L G LGHG      V  T +      +V  ++    H
Sbjct: 372 VVGGAQHALALRKDGTLWAWGGGLAGQLGHGGSERHVVPATVMGL---TNVTSMATGSFH 428

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRD-TNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
           +   L+ G V+  G NS    G    T R +  P  V  L  V  + V A  + +  + +
Sbjct: 429 SLAALEDGSVWAWGRNSYGQLGDGTVTERHV--PVRVPGLPSV--RAVAAAGHHSIAVAM 484

Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
            G V T G N  GQLG G T DR  P +++ L    SV+ IAAG S++LA+  +G V+++
Sbjct: 485 DGTVWTWGRNAAGQLGDGTTRDRARPVAVSGLT---SVLAIAAGGSHVLALRSDGDVWAW 541

Query: 294 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVR-VSAGDEHVVALDSSGYVYTWGKGYC 352
           G  +   LG G   D+L P      R  G+  ++ V+AG    +AL + G V+TWG+G+ 
Sbjct: 542 GYNALGQLGDGTSGDKLTP-----VRVPGLAPIQSVAAGTYFSMALANDGTVWTWGEGFE 596

Query: 353 GALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDR 412
           G LG G  + +  P  +  L     + V +       +   G+V+ +G    G LG  D 
Sbjct: 597 GQLGDGGGVQRLSPVAVKGLSDIRNISVGS--AHALAVRGDGTVWAWGDNNEGQLG--DG 652

Query: 413 GVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLE 472
              D+   P  + +L    ++ +S G  H++ +   G +  +G N   QLG  TL   + 
Sbjct: 653 SWMDR-FAPVQVRNLTG--ITAVSGGRSHSLALHADGTVRAWGSNGYGQLGDGTLTSRVL 709

Query: 473 PTEI 476
           P+ I
Sbjct: 710 PSVI 713



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 102/360 (28%), Positives = 151/360 (41%), Gaps = 20/360 (5%)

Query: 107  VETSAGNMQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHV 165
            V +  G   ++ G +H + L  + +V++ G +  G LG G      +   R+   S   V
Sbjct: 1013 VASVKGLRAVSAGAHHAMALGEDGAVWAWGDNTLGQLGDGTSAFTVMWPQRVAELS--DV 1070

Query: 166  VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVE--ALKGVPCKQVTA 223
              V+A E  +  V   G  F+ G N     G   T  P   P  V+    K      V A
Sbjct: 1071 ESVAAGEQFSVAVAHDGTAFSWGSNEYGQLGDGKTG-PRLSPAEVKIGGSKARTVVTVGA 1129

Query: 224  GLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
                   L   G +   G N  GQLG G T  R +P  I     V  V  ++ G  + LA
Sbjct: 1130 WGQHAVALMADGTLQAWGDNATGQLGDGTTTRRSSPGEI---RGVTRVTAVSTGAWHSLA 1186

Query: 284  VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 343
            +  +G V+++G+     LG G       P  +Q  R     VV ++AG  H VA+ S G 
Sbjct: 1187 LRLDGTVWAWGANGFGQLGDGTTTARAVPVPVQGLR----DVVAIAAGGYHSVAVRSDGT 1242

Query: 344  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 403
            V+TWG    G LG G    + LP  +  L+   A  V      +  L   G+V G+G   
Sbjct: 1243 VWTWGYNTFGQLGDGTSESRALPVQVHKLEGVQA--VTGGDHHSLALHADGTVSGWGHNA 1300

Query: 404  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 463
             G LG   R  +D+    R+ D      ++++  G  HTV +   G ++ +GDN   QLG
Sbjct: 1301 SGQLGDGSR--TDRYTPVRLKD---VDGLTEVRAGAAHTVALGKDGTVWTWGDNAHGQLG 1355



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 118/485 (24%), Positives = 183/485 (37%), Gaps = 78/485 (16%)

Query: 50   PQKFRSLVDLAASQLCALHSIYAGMSRNVQIELLNRC----NGNWKRVLRFLQSVEHSSD 105
            P +  S+  L A    A H++  G    V     N      +G     + + Q V   SD
Sbjct: 1010 PHRVASVKGLRAVSAGAHHAMALGEDGAVWAWGDNTLGQLGDGTSAFTVMWPQRVAELSD 1069

Query: 106  IVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQ-CVSFTRINFPSAAH 164
            +   +AG       ++   +  + + FS GS+  G LG G    +   +  +I    A  
Sbjct: 1070 VESVAAGE------QFSVAVAHDGTAFSWGSNEYGQLGDGKTGPRLSPAEVKIGGSKART 1123

Query: 165  VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVP-CKQVTA 223
            VV V A   HA  ++  G +   GDN++   G   T R   R    E ++GV     V+ 
Sbjct: 1124 VVTVGAWGQHAVALMADGTLQAWGDNATGQLGDGTTTR---RSSPGE-IRGVTRVTAVST 1179

Query: 224  GLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
            G   +  L + G V   G+N  GQLG G T  R  P    P++ +  VV IAAG  + +A
Sbjct: 1180 GAWHSLALRLDGTVWAWGANGFGQLGDGTTTARAVP---VPVQGLRDVVAIAAGGYHSVA 1236

Query: 284  VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVV----------------- 326
            V  +G V+++G  +   LG G       P  +Q  + +G+  V                 
Sbjct: 1237 VRSDGTVWTWGYNTFGQLGDGTSESRALP--VQVHKLEGVQAVTGGDHHSLALHADGTVS 1294

Query: 327  -------------------------------RVSAGDEHVVALDSSGYVYTWGKGYCGAL 355
                                            V AG  H VAL   G V+TWG    G L
Sbjct: 1295 GWGHNASGQLGDGSRTDRYTPVRLKDVDGLTEVRAGAAHTVALGKDGTVWTWGDNAHGQL 1354

Query: 356  GHG--DEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRG 413
            G G      + +P+P+S L +  A  + A    +F        + +G    G LG  D  
Sbjct: 1355 GDGVTGPRMRLVPKPVSGLPA--ATAIGAGAWHSFASGPEEGAFTWGRNSHGQLGVGDNA 1412

Query: 414  VSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEP 473
               +  R ++L  L+      I+ G   ++ +T  G L  +G +    LG   L     P
Sbjct: 1413 PRAEPQRMKLLSGLKV-----IAGGADTSLAMTQEGVLMSWGSSLHGTLGLGVLGQRASP 1467

Query: 474  TEIFI 478
              + +
Sbjct: 1468 GRVLL 1472



 Score = 83.2 bits (204), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 102/411 (24%), Positives = 164/411 (39%), Gaps = 69/411 (16%)

Query: 116 ITTGRYHTLLISN-SSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           +  G Y ++ ++N  +V++ G    G LG G    +    + +     + +  +S    H
Sbjct: 572 VAAGTYFSMALANDGTVWTWGEGFEGQLGDGGGVQR---LSPVAVKGLSDIRNISVGSAH 628

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 234
           A  V   G V+  GDN+    G   +    F P  V  L G+    V+ G + +  L   
Sbjct: 629 ALAVRGDGTVWAWGDNNEGQLGD-GSWMDRFAPVQVRNLTGITA--VSGGRSHSLALHAD 685

Query: 235 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL----------------------------- 265
           G V   GSN +GQLG G    R  P  I  L                             
Sbjct: 686 GTVRAWGSNGYGQLGDGTLTSRVLPSVIPGLSGIQALHPGHLHVLALHADKTLRGWGYNR 745

Query: 266 ------------------EEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHG-EQ 306
                               +G V ++AAG ++ L V  +G V ++G+ ++  LG G   
Sbjct: 746 FGQLGLGAAGWSARPVQVRGIGRVERLAAGRAHALLVRADGSVVAWGANASGQLGDGGTT 805

Query: 307 HDELQPRAIQTFRRKGIHVVR-VSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTL 365
           H     RA+     +G+   R V++G +H + L   G V+TWG+   G LG G    +  
Sbjct: 806 HGA---RAVTV---RGVSCARSVASGGQHSLVLACDGTVWTWGENQRGQLGDGTTSARVA 859

Query: 366 PEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILD 425
           P  +  L+  +A  V      +  L   G+V+ +G    G +G  D  V D+ L PR ++
Sbjct: 860 PGRVEGLEGIVA--VAGGGDTSLALRSDGTVWAWGANASGQVG--DGTVEDR-LTPRRIE 914

Query: 426 SLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 476
           +L    V  I+ G  H + V + G ++ +G N   QLG       L P  +
Sbjct: 915 AL--SDVMVIALGESHALAVGEDGTVWAWGANASGQLGDGGETPSLLPARV 963



 Score = 49.3 bits (116), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 44/166 (26%), Positives = 76/166 (45%), Gaps = 9/166 (5%)

Query: 313 RAIQTFR-RKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGD-EIDKTLPEPLS 370
           RA Q  R  + +  +R++AG +H + L  +G V+ WG    G LG  D    +  P  L 
Sbjct: 55  RAAQAIRLAEPLSPMRIAAGAQHSLFLTPTGAVWAWGGNSAGQLGGADTSFQRLSPARLP 114

Query: 371 SLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAH 430
            L+    V V +    +  L   G+V+ +G    G LG  D   +D+   P+ ++     
Sbjct: 115 VLED--IVSVVSGDAHSLALGADGTVWTWGSNSSGQLG--DGTTTDRA-EPQRVEGFT-- 167

Query: 431 HVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 476
            V  ++ G +H++V+   G ++ +G N   QLG    +  L P  +
Sbjct: 168 DVVAVAAGDFHSLVLKSDGTVWAWGTNFHGQLGQGHTQTGLWPKPV 213


>gi|222623461|gb|EEE57593.1| hypothetical protein OsJ_07959 [Oryza sativa Japonica Group]
          Length = 976

 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 100/347 (28%), Positives = 160/347 (46%), Gaps = 21/347 (6%)

Query: 131 VFSCGSSLCGVLGHGPETTQCVSFTRI-NFPSAAHVVQVSASENHAAFVLQSGQVFTCGD 189
           +F  G     VL HG  +   VS  R+ N      V  V+  E HAA V + G+VF+ G 
Sbjct: 170 IFVWGEVPGNVLDHGDVSKANVSLPRLLNTTHIIDVQSVACGEKHAAIVTKQGEVFSWGV 229

Query: 190 NSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLG 249
           ++    GH+  +  +  P+++E+L     K +  G   T  ++I G ++  G  TH    
Sbjct: 230 DNGGRLGHK-VSVSVSDPKIIESLASTRVKAIAFGAKHTCAVSISGELYEWGEGTHCLGL 288

Query: 250 HGDTLDRPTP---KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ 306
            GD   R      K   PL+ + S+++IA G  +   ++  G ++++G G+   LGHG+ 
Sbjct: 289 WGDQYQRSQWFPHKLFGPLDGI-SILKIACGHWHTAIISSAGQLFAYGDGTFGVLGHGDT 347

Query: 307 HDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL----------DSSGYVYTWGKGYCGALG 356
               +P+ +++   KG+    ++ G  H  A+            SG ++TWG    G LG
Sbjct: 348 LTVARPKQVESL--KGVRAKAIACGPWHTAAIVERMGTVKSNAPSGKLFTWGDADRGKLG 405

Query: 357 HGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSD 416
           H D+  K +P  +  L      QV   K +T VL  TG V+  G    G LG P   +S+
Sbjct: 406 HADKKMKLVPTCVEPLNDFDFAQVSCAKAQTIVLTITGVVFTIGSKEHGRLGNP---LSE 462

Query: 417 KVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 463
                 I   L+   V +IS+G  H  V+T  G++F +G     QLG
Sbjct: 463 DTSICLIEGPLKTEFVREISSGSSHIAVLTMNGKVFTWGKGTEGQLG 509



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 84/312 (26%), Positives = 142/312 (45%), Gaps = 19/312 (6%)

Query: 167 QVSASENHAAFVLQS-GQVFTCGDNSSFCCGHRDTNRP-IFRPRLVEALKGVPCKQVTAG 224
           Q S+   H A+   S   +F  G+       H D ++  +  PRL+     +  + V  G
Sbjct: 152 QKSSEGLHVAYGATSLKDIFVWGEVPGNVLDHGDVSKANVSLPRLLNTTHIIDVQSVACG 211

Query: 225 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 284
                 +T +G V + G +  G+LGH  ++    PK I  L     V  IA G  +  AV
Sbjct: 212 EKHAAIVTKQGEVFSWGVDNGGRLGHKVSVSVSDPKIIESLAST-RVKAIAFGAKHTCAV 270

Query: 285 TGNGVVYSFGSGSNFCLG-HGEQHDELQPRAIQTF-RRKGIHVVRVSAGDEHVVALDSSG 342
           + +G +Y +G G++ CLG  G+Q+   Q    + F    GI +++++ G  H   + S+G
Sbjct: 271 SISGELYEWGEGTH-CLGLWGDQYQRSQWFPHKLFGPLDGISILKIACGHWHTAIISSAG 329

Query: 343 YVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVD---------- 392
            ++ +G G  G LGHGD +    P+ + SLK   A  +      T  +V+          
Sbjct: 330 QLFAYGDGTFGVLGHGDTLTVARPKQVESLKGVRAKAIACGPWHTAAIVERMGTVKSNAP 389

Query: 393 TGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLF 452
           +G ++ +G    G LG  D+ +    L P  ++ L     +Q+S     T+V+T  G +F
Sbjct: 390 SGKLFTWGDADRGKLGHADKKMK---LVPTCVEPLNDFDFAQVSCAKAQTIVLTITGVVF 446

Query: 453 GFGDNERAQLGH 464
             G  E  +LG+
Sbjct: 447 TIGSKEHGRLGN 458



 Score = 95.5 bits (236), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 75/264 (28%), Positives = 119/264 (45%), Gaps = 27/264 (10%)

Query: 133 SCGSSLCGVLGHGPETTQCV-----SFTRIN-FP-------SAAHVVQVSASENHAAFVL 179
           +C  S+ G L    E T C+      + R   FP           +++++    H A + 
Sbjct: 267 TCAVSISGELYEWGEGTHCLGLWGDQYQRSQWFPHKLFGPLDGISILKIACGHWHTAIIS 326

Query: 180 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR----- 234
            +GQ+F  GD +    GH DT   + RP+ VE+LKGV  K +  G   T  +  R     
Sbjct: 327 SAGQLFAYGDGTFGVLGHGDT-LTVARPKQVESLKGVRAKAIACGPWHTAAIVERMGTVK 385

Query: 235 -----GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 289
                G + T G    G+LGH D   +  P  + PL +     Q++   +  + +T  GV
Sbjct: 386 SNAPSGKLFTWGDADRGKLGHADKKMKLVPTCVEPLNDF-DFAQVSCAKAQTIVLTITGV 444

Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 349
           V++ GS  +  LG+    D      +     K   V  +S+G  H+  L  +G V+TWGK
Sbjct: 445 VFTIGSKEHGRLGNPLSED--TSICLIEGPLKTEFVREISSGSSHIAVLTMNGKVFTWGK 502

Query: 350 GYCGALGHGDEIDKTLPEPLSSLK 373
           G  G LG GD +D++ P  + +L+
Sbjct: 503 GTEGQLGLGDYVDRSYPTLVEALE 526



 Score = 75.9 bits (185), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 61/218 (27%), Positives = 101/218 (46%), Gaps = 20/218 (9%)

Query: 271 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 330
           V  +A G  +   VT  G V+S+G  +   LGH        P+ I++       V  ++ 
Sbjct: 205 VQSVACGEKHAAIVTKQGEVFSWGVDNGGRLGHKVSVSVSDPKIIESL--ASTRVKAIAF 262

Query: 331 GDEHVVALDSSGYVYTWGKG-YCGALGHGDEIDKT--LPEPL-SSLKSHLAVQVCARKRK 386
           G +H  A+  SG +Y WG+G +C  L  GD+  ++   P  L   L     +++      
Sbjct: 263 GAKHTCAVSISGELYEWGEGTHCLGLW-GDQYQRSQWFPHKLFGPLDGISILKIACGHWH 321

Query: 387 TFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT 446
           T ++   G ++ +G   FG LG  D   +  V RP+ ++SL+      I+ G +HT  + 
Sbjct: 322 TAIISSAGQLFAYGDGTFGVLGHGD---TLTVARPKQVESLKGVRAKAIACGPWHTAAIV 378

Query: 447 DR----------GRLFGFGDNERAQLGHDTLRGCLEPT 474
           +R          G+LF +GD +R +LGH   +  L PT
Sbjct: 379 ERMGTVKSNAPSGKLFTWGDADRGKLGHADKKMKLVPT 416



 Score = 58.2 bits (139), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 48/182 (26%), Positives = 85/182 (46%), Gaps = 7/182 (3%)

Query: 290 VYSFGSGSNFCLGHGE--QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 347
           ++ +G      L HG+  + +   PR + T     I V  V+ G++H   +   G V++W
Sbjct: 170 IFVWGEVPGNVLDHGDVSKANVSLPRLLNTTHI--IDVQSVACGEKHAAIVTKQGEVFSW 227

Query: 348 GKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSL 407
           G    G LGH   +  + P+ + SL S     +    + T  +  +G +Y +G  G   L
Sbjct: 228 GVDNGGRLGHKVSVSVSDPKIIESLASTRVKAIAFGAKHTCAVSISGELYEWG-EGTHCL 286

Query: 408 G-FPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH-D 465
           G + D+    +    ++   L    + +I+ G +HT +++  G+LF +GD     LGH D
Sbjct: 287 GLWGDQYQRSQWFPHKLFGPLDGISILKIACGHWHTAIISSAGQLFAYGDGTFGVLGHGD 346

Query: 466 TL 467
           TL
Sbjct: 347 TL 348



 Score = 52.0 bits (123), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 56/234 (23%), Positives = 89/234 (38%), Gaps = 66/234 (28%)

Query: 114 MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           ++I  G +HT +IS++  +F+ G    GVLGHG +T       ++          ++   
Sbjct: 313 LKIACGHWHTAIISSAGQLFAYGDGTFGVLGHG-DTLTVARPKQVESLKGVRAKAIACGP 371

Query: 173 NHAAFVLQ----------SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG-----VP 217
            H A +++          SG++FT GD      GH D    +  P  VE L       V 
Sbjct: 372 WHTAAIVERMGTVKSNAPSGKLFTWGDADRGKLGHADKKMKLV-PTCVEPLNDFDFAQVS 430

Query: 218 C-----------------------------------------------KQVTAGLNFTGF 230
           C                                               +++++G +    
Sbjct: 431 CAKAQTIVLTITGVVFTIGSKEHGRLGNPLSEDTSICLIEGPLKTEFVREISSGSSHIAV 490

Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 284
           LT+ G V T G  T GQLG GD +DR  P  +  LE+   V  IA G ++ +A+
Sbjct: 491 LTMNGKVFTWGKGTEGQLGLGDYVDRSYPTLVEALED-KQVHSIACGFNFTMAI 543


>gi|41052709|dbj|BAD07566.1| putative ZR1 protein [Oryza sativa Japonica Group]
 gi|50251941|dbj|BAD27877.1| putative ZR1 protein [Oryza sativa Japonica Group]
          Length = 978

 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 100/347 (28%), Positives = 160/347 (46%), Gaps = 21/347 (6%)

Query: 131 VFSCGSSLCGVLGHGPETTQCVSFTRI-NFPSAAHVVQVSASENHAAFVLQSGQVFTCGD 189
           +F  G     VL HG  +   VS  R+ N      V  V+  E HAA V + G+VF+ G 
Sbjct: 172 IFVWGEVPGNVLDHGDVSKANVSLPRLLNTTHIIDVQSVACGEKHAAIVTKQGEVFSWGV 231

Query: 190 NSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLG 249
           ++    GH+  +  +  P+++E+L     K +  G   T  ++I G ++  G  TH    
Sbjct: 232 DNGGRLGHK-VSVSVSDPKIIESLASTRVKAIAFGAKHTCAVSISGELYEWGEGTHCLGL 290

Query: 250 HGDTLDRPTP---KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ 306
            GD   R      K   PL+ + S+++IA G  +   ++  G ++++G G+   LGHG+ 
Sbjct: 291 WGDQYQRSQWFPHKLFGPLDGI-SILKIACGHWHTAIISSAGQLFAYGDGTFGVLGHGDT 349

Query: 307 HDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL----------DSSGYVYTWGKGYCGALG 356
               +P+ +++   KG+    ++ G  H  A+            SG ++TWG    G LG
Sbjct: 350 LTVARPKQVESL--KGVRAKAIACGPWHTAAIVERMGTVKSNAPSGKLFTWGDADRGKLG 407

Query: 357 HGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSD 416
           H D+  K +P  +  L      QV   K +T VL  TG V+  G    G LG P   +S+
Sbjct: 408 HADKKMKLVPTCVEPLNDFDFAQVSCAKAQTIVLTITGVVFTIGSKEHGRLGNP---LSE 464

Query: 417 KVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 463
                 I   L+   V +IS+G  H  V+T  G++F +G     QLG
Sbjct: 465 DTSICLIEGPLKTEFVREISSGSSHIAVLTMNGKVFTWGKGTEGQLG 511



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 79/294 (26%), Positives = 135/294 (45%), Gaps = 18/294 (6%)

Query: 184 VFTCGDNSSFCCGHRDTNRP-IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 242
           +F  G+       H D ++  +  PRL+     +  + V  G      +T +G V + G 
Sbjct: 172 IFVWGEVPGNVLDHGDVSKANVSLPRLLNTTHIIDVQSVACGEKHAAIVTKQGEVFSWGV 231

Query: 243 NTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLG 302
           +  G+LGH  ++    PK I  L     V  IA G  +  AV+ +G +Y +G G++ CLG
Sbjct: 232 DNGGRLGHKVSVSVSDPKIIESLAST-RVKAIAFGAKHTCAVSISGELYEWGEGTH-CLG 289

Query: 303 -HGEQHDELQPRAIQTF-RRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 360
             G+Q+   Q    + F    GI +++++ G  H   + S+G ++ +G G  G LGHGD 
Sbjct: 290 LWGDQYQRSQWFPHKLFGPLDGISILKIACGHWHTAIISSAGQLFAYGDGTFGVLGHGDT 349

Query: 361 IDKTLPEPLSSLKSHLAVQVCARKRKTFVLVD----------TGSVYGFGWMGFGSLGFP 410
           +    P+ + SLK   A  +      T  +V+          +G ++ +G    G LG  
Sbjct: 350 LTVARPKQVESLKGVRAKAIACGPWHTAAIVERMGTVKSNAPSGKLFTWGDADRGKLGHA 409

Query: 411 DRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 464
           D+ +    L P  ++ L     +Q+S     T+V+T  G +F  G  E  +LG+
Sbjct: 410 DKKMK---LVPTCVEPLNDFDFAQVSCAKAQTIVLTITGVVFTIGSKEHGRLGN 460



 Score = 95.5 bits (236), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 75/264 (28%), Positives = 119/264 (45%), Gaps = 27/264 (10%)

Query: 133 SCGSSLCGVLGHGPETTQCV-----SFTRIN-FP-------SAAHVVQVSASENHAAFVL 179
           +C  S+ G L    E T C+      + R   FP           +++++    H A + 
Sbjct: 269 TCAVSISGELYEWGEGTHCLGLWGDQYQRSQWFPHKLFGPLDGISILKIACGHWHTAIIS 328

Query: 180 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR----- 234
            +GQ+F  GD +    GH DT   + RP+ VE+LKGV  K +  G   T  +  R     
Sbjct: 329 SAGQLFAYGDGTFGVLGHGDT-LTVARPKQVESLKGVRAKAIACGPWHTAAIVERMGTVK 387

Query: 235 -----GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 289
                G + T G    G+LGH D   +  P  + PL +     Q++   +  + +T  GV
Sbjct: 388 SNAPSGKLFTWGDADRGKLGHADKKMKLVPTCVEPLNDF-DFAQVSCAKAQTIVLTITGV 446

Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 349
           V++ GS  +  LG+    D      +     K   V  +S+G  H+  L  +G V+TWGK
Sbjct: 447 VFTIGSKEHGRLGNPLSED--TSICLIEGPLKTEFVREISSGSSHIAVLTMNGKVFTWGK 504

Query: 350 GYCGALGHGDEIDKTLPEPLSSLK 373
           G  G LG GD +D++ P  + +L+
Sbjct: 505 GTEGQLGLGDYVDRSYPTLVEALE 528



 Score = 75.9 bits (185), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 61/218 (27%), Positives = 101/218 (46%), Gaps = 20/218 (9%)

Query: 271 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 330
           V  +A G  +   VT  G V+S+G  +   LGH        P+ I++       V  ++ 
Sbjct: 207 VQSVACGEKHAAIVTKQGEVFSWGVDNGGRLGHKVSVSVSDPKIIESL--ASTRVKAIAF 264

Query: 331 GDEHVVALDSSGYVYTWGKG-YCGALGHGDEIDKT--LPEPL-SSLKSHLAVQVCARKRK 386
           G +H  A+  SG +Y WG+G +C  L  GD+  ++   P  L   L     +++      
Sbjct: 265 GAKHTCAVSISGELYEWGEGTHCLGLW-GDQYQRSQWFPHKLFGPLDGISILKIACGHWH 323

Query: 387 TFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT 446
           T ++   G ++ +G   FG LG  D   +  V RP+ ++SL+      I+ G +HT  + 
Sbjct: 324 TAIISSAGQLFAYGDGTFGVLGHGD---TLTVARPKQVESLKGVRAKAIACGPWHTAAIV 380

Query: 447 DR----------GRLFGFGDNERAQLGHDTLRGCLEPT 474
           +R          G+LF +GD +R +LGH   +  L PT
Sbjct: 381 ERMGTVKSNAPSGKLFTWGDADRGKLGHADKKMKLVPT 418



 Score = 58.2 bits (139), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 48/182 (26%), Positives = 85/182 (46%), Gaps = 7/182 (3%)

Query: 290 VYSFGSGSNFCLGHGE--QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 347
           ++ +G      L HG+  + +   PR + T     I V  V+ G++H   +   G V++W
Sbjct: 172 IFVWGEVPGNVLDHGDVSKANVSLPRLLNTTHI--IDVQSVACGEKHAAIVTKQGEVFSW 229

Query: 348 GKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSL 407
           G    G LGH   +  + P+ + SL S     +    + T  +  +G +Y +G  G   L
Sbjct: 230 GVDNGGRLGHKVSVSVSDPKIIESLASTRVKAIAFGAKHTCAVSISGELYEWG-EGTHCL 288

Query: 408 G-FPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH-D 465
           G + D+    +    ++   L    + +I+ G +HT +++  G+LF +GD     LGH D
Sbjct: 289 GLWGDQYQRSQWFPHKLFGPLDGISILKIACGHWHTAIISSAGQLFAYGDGTFGVLGHGD 348

Query: 466 TL 467
           TL
Sbjct: 349 TL 350



 Score = 52.0 bits (123), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 56/234 (23%), Positives = 89/234 (38%), Gaps = 66/234 (28%)

Query: 114 MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           ++I  G +HT +IS++  +F+ G    GVLGHG +T       ++          ++   
Sbjct: 315 LKIACGHWHTAIISSAGQLFAYGDGTFGVLGHG-DTLTVARPKQVESLKGVRAKAIACGP 373

Query: 173 NHAAFVLQ----------SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG-----VP 217
            H A +++          SG++FT GD      GH D    +  P  VE L       V 
Sbjct: 374 WHTAAIVERMGTVKSNAPSGKLFTWGDADRGKLGHADKKMKLV-PTCVEPLNDFDFAQVS 432

Query: 218 C-----------------------------------------------KQVTAGLNFTGF 230
           C                                               +++++G +    
Sbjct: 433 CAKAQTIVLTITGVVFTIGSKEHGRLGNPLSEDTSICLIEGPLKTEFVREISSGSSHIAV 492

Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 284
           LT+ G V T G  T GQLG GD +DR  P  +  LE+   V  IA G ++ +A+
Sbjct: 493 LTMNGKVFTWGKGTEGQLGLGDYVDRSYPTLVEALED-KQVHSIACGFNFTMAI 545


>gi|327273159|ref|XP_003221348.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3-like [Anolis
           carolinensis]
          Length = 1109

 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 100/314 (31%), Positives = 149/314 (47%), Gaps = 21/314 (6%)

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPI-FRPRLVEALKGVPCKQVTAGLNFTGF 230
           EN     L+  ++   G  S    G   T +PI   PR    +     K+V  G N + F
Sbjct: 48  ENKLDDFLKGKKMLCWGYWSFGYPGTSSTVQPIILEPRTSGFIHERSVKEVACGGNHSIF 107

Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS-----VVQIAAGPSYMLAVT 285
           L   G V+TCG NT GQLGH     +P        E++G+     ++ +A G S+ LA++
Sbjct: 108 LLEDGEVYTCGVNTKGQLGHEKEGSKP--------EQIGALADQHIIHVACGESHSLALS 159

Query: 286 GNGVVYSFGSGSNFCLGHGEQHDELQ-PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
             G ++S+G+GS+  LG     D +  PR I+   ++ I  ++VS G+ H +AL + G  
Sbjct: 160 DQGRLFSWGAGSDGQLGLTTTEDSVAVPRLIKKLNQEMI--LQVSCGNWHCLALAADGQF 217

Query: 345 YTWGKGYCGALGHGDEI-DKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 403
           + WG+   G LG G E   +  P+ + SL      QV A    +F L  +G+V+G+G   
Sbjct: 218 FAWGQNSHGQLGLGKEFPSQASPQRVKSLDGIPLAQVAAGGAHSFALSLSGAVFGWGKNT 277

Query: 404 FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 463
            G LG  D    +    P  +  LR   V  IS G  HT V+T  G +F FG     QLG
Sbjct: 278 SGQLGLSDEQDRES---PCHVKLLRTQKVVYISCGSDHTAVLTKTGGVFTFGAGSCGQLG 334

Query: 464 HDTLRGCLEPTEIF 477
           HD+    + P  + 
Sbjct: 335 HDSFNDEVNPRRVL 348



 Score =  121 bits (304), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 98/316 (31%), Positives = 155/316 (49%), Gaps = 14/316 (4%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V +V+   NH+ F+L+ G+V+TCG N+    GH        +P  + AL       V  G
Sbjct: 95  VKEVACGGNHSIFLLEDGEVYTCGVNTKGQLGHEKEGS---KPEQIGALADQHIIHVACG 151

Query: 225 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDR-PTPKSIAPLEEVGSVVQIAAGPSYMLA 283
            + +  L+ +G + + G+ + GQLG   T D    P+ I  L +   ++Q++ G  + LA
Sbjct: 152 ESHSLALSDQGRLFSWGAGSDGQLGLTTTEDSVAVPRLIKKLNQ-EMILQVSCGNWHCLA 210

Query: 284 VTGNGVVYSFGSGSNFCLGHGEQH-DELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
           +  +G  +++G  S+  LG G++   +  P+ +++    GI + +V+AG  H  AL  SG
Sbjct: 211 LAADGQFFAWGQNSHGQLGLGKEFPSQASPQRVKSL--DGIPLAQVAAGGAHSFALSLSG 268

Query: 343 YVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWM 402
            V+ WGK   G LG  DE D+  P  +  L++   V +      T VL  TG V+ FG  
Sbjct: 269 AVFGWGKNTSGQLGLSDEQDRESPCHVKLLRTQKVVYISCGSDHTAVLTKTGGVFTFGAG 328

Query: 403 GFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV-VTDRGRLFGFGDNERAQ 461
             G LG      +D+V  PR +  L    VSQI+ G  HT+  V   G ++ FG   + Q
Sbjct: 329 SCGQLG--HDSFNDEV-NPRRVLELMGSEVSQIACGRQHTLAFVPSSGLIYAFGCGIKGQ 385

Query: 462 L--GHDTLRGCLEPTE 475
           L  GH     C  P +
Sbjct: 386 LGSGHTCNLKCPSPVK 401



 Score =  115 bits (288), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 85/309 (27%), Positives = 145/309 (46%), Gaps = 14/309 (4%)

Query: 102 HSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPS 161
           H   + E + G      G +   L+ +  V++CG +  G LGH  E ++     +I   +
Sbjct: 91  HERSVKEVACG------GNHSIFLLEDGEVYTCGVNTKGQLGHEKEGSKP---EQIGALA 141

Query: 162 AAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQV 221
             H++ V+  E+H+  +   G++F+ G  S    G   T   +  PRL++ L      QV
Sbjct: 142 DQHIIHVACGESHSLALSDQGRLFSWGAGSDGQLGLTTTEDSVAVPRLIKKLNQEMILQV 201

Query: 222 TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTL-DRPTPKSIAPLEEVGSVVQIAAGPSY 280
           + G      L   G     G N+HGQLG G     + +P+ +  L+ +  + Q+AAG ++
Sbjct: 202 SCGNWHCLALAADGQFFAWGQNSHGQLGLGKEFPSQASPQRVKSLDGI-PLAQVAAGGAH 260

Query: 281 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 340
             A++ +G V+ +G  ++  LG  ++ D   P  ++  R +   VV +S G +H   L  
Sbjct: 261 SFALSLSGAVFGWGKNTSGQLGLSDEQDRESPCHVKLLRTQ--KVVYISCGSDHTAVLTK 318

Query: 341 SGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGF 399
           +G V+T+G G CG LGH    D+  P  +  L      Q+ C R+     +  +G +Y F
Sbjct: 319 TGGVFTFGAGSCGQLGHDSFNDEVNPRRVLELMGSEVSQIACGRQHTLAFVPSSGLIYAF 378

Query: 400 GWMGFGSLG 408
           G    G LG
Sbjct: 379 GCGIKGQLG 387



 Score =  104 bits (260), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 87/267 (32%), Positives = 127/267 (47%), Gaps = 10/267 (3%)

Query: 114 MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSAS 171
           + +  G  H+L +S+   +FS G+   G LG    T   V+  R I   +   ++QVS  
Sbjct: 146 IHVACGESHSLALSDQGRLFSWGAGSDGQLGLT-TTEDSVAVPRLIKKLNQEMILQVSCG 204

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
             H   +   GQ F  G NS    G          P+ V++L G+P  QV AG   +  L
Sbjct: 205 NWHCLALAADGQFFAWGQNSHGQLGLGKEFPSQASPQRVKSLDGIPLAQVAAGGAHSFAL 264

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
           ++ G V   G NT GQLG  D  DR +P  +  L     VV I+ G  +   +T  G V+
Sbjct: 265 SLSGAVFGWGKNTSGQLGLSDEQDRESPCHVK-LLRTQKVVYISCGSDHTAVLTKTGGVF 323

Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA-LDSSGYVYTWGKG 350
           +FG+GS   LGH   +DE+ PR +      G  V +++ G +H +A + SSG +Y +G G
Sbjct: 324 TFGAGSCGQLGHDSFNDEVNPRRV--LELMGSEVSQIACGRQHTLAFVPSSGLIYAFGCG 381

Query: 351 YCGALGHGDEIDKTLPEPLSSLKSHLA 377
             G LG G   +   P P   +K H A
Sbjct: 382 IKGQLGSGHTCNLKCPSP---VKGHWA 405


>gi|357135039|ref|XP_003569119.1| PREDICTED: uncharacterized protein LOC100832036 [Brachypodium
           distachyon]
          Length = 913

 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 102/324 (31%), Positives = 151/324 (46%), Gaps = 22/324 (6%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V  V     HA+ V +SG+VFT G++S    GH  T      PRLVE+L       V  G
Sbjct: 79  VYHVDCGVRHASLVTRSGEVFTWGEDSGGRLGH-GTREDSVHPRLVESLAACNIDFVACG 137

Query: 225 LNFTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 282
              T  +T  G ++T G  TH  G LGHG  +    P+ I+   E   V  ++ G  +  
Sbjct: 138 EFHTCAVTTTGELYTWGDGTHNVGLLGHGTDVGHWIPRRISGALEGLQVAYVSCGTWHTA 197

Query: 283 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD--- 339
            +T  G +++FG GS   LGHG       PR +++    G+  + V+ G  H  A+    
Sbjct: 198 LITSMGQLFTFGDGSFGVLGHGNVKSISCPREVESL--SGLKTIAVACGVWHTAAIVEVI 255

Query: 340 --------SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 391
                   S+G ++TWG G    LGHGD+  +  P  ++SL  +   +V      T  L 
Sbjct: 256 VTQSSATVSAGKLFTWGDGDKHRLGHGDKEARLNPTCVASLIDYDFYRVACGHSLTVGLT 315

Query: 392 DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRIL-DSLRAHHVSQISTGLYHTVVVTDRGR 450
            +G V+  G   +G LG P+   SD   RP ++ D +   HV Q++ G YH  V+T R  
Sbjct: 316 TSGKVWTMGNSVYGQLGNPN---SDG--RPCLVGDKITNEHVLQVACGSYHVSVLTSRSE 370

Query: 451 LFGFGDNERAQLGHDTLRGCLEPT 474
           +F +G     +LGH  +     PT
Sbjct: 371 VFTWGKGANGRLGHGDIEDQKVPT 394



 Score = 92.0 bits (227), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 80/273 (29%), Positives = 122/273 (44%), Gaps = 21/273 (7%)

Query: 116 ITTGRYHTLLISNSS---VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +  G +HT  ++ +     +  G+   G+LGHG +    +            V  VS   
Sbjct: 134 VACGEFHTCAVTTTGELYTWGDGTHNVGLLGHGTDVGHWIPRRISGALEGLQVAYVSCGT 193

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            H A +   GQ+FT GD S    GH +  + I  PR VE+L G+    V  G+  T  + 
Sbjct: 194 WHTALITSMGQLFTFGDGSFGVLGHGNV-KSISCPREVESLSGLKTIAVACGVWHTAAIV 252

Query: 233 -----------IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 281
                        G + T G     +LGHGD   R  P  +A L +     ++A G S  
Sbjct: 253 EVIVTQSSATVSAGKLFTWGDGDKHRLGHGDKEARLNPTCVASLIDY-DFYRVACGHSLT 311

Query: 282 LAVTGNGVVYSFGSGSNFCLGH-GEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 340
           + +T +G V++ G   N   G  G  + + +P  +   +    HV++V+ G  HV  L S
Sbjct: 312 VGLTTSGKVWTMG---NSVYGQLGNPNSDGRP-CLVGDKITNEHVLQVACGSYHVSVLTS 367

Query: 341 SGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
              V+TWGKG  G LGHGD  D+ +P  + +LK
Sbjct: 368 RSEVFTWGKGANGRLGHGDIEDQKVPTLVEALK 400



 Score = 89.4 bits (220), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 74/243 (30%), Positives = 116/243 (47%), Gaps = 25/243 (10%)

Query: 252 DTLDRPTPKS----IAPLEE--VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGE 305
           DT+ R T K+      PLE   V  V  +  G  +   VT +G V+++G  S   LGHG 
Sbjct: 54  DTVIRSTGKTDFLLPKPLESNLVLDVYHVDCGVRHASLVTRSGEVFTWGEDSGGRLGHGT 113

Query: 306 QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY--CGALGHGDEIDK 363
           + D + PR +++      ++  V+ G+ H  A+ ++G +YTWG G    G LGHG ++  
Sbjct: 114 REDSVHPRLVESL--AACNIDFVACGEFHTCAVTTTGELYTWGDGTHNVGLLGHGTDVGH 171

Query: 364 TLPEPLSSLKSHLAVQ-VCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPR 422
            +P  +S     L V  V      T ++   G ++ FG   FG LG    G    +  PR
Sbjct: 172 WIPRRISGALEGLQVAYVSCGTWHTALITSMGQLFTFGDGSFGVLGH---GNVKSISCPR 228

Query: 423 ILDSLRAHHVSQISTGLYHT-----VVVTDR------GRLFGFGDNERAQLGHDTLRGCL 471
            ++SL       ++ G++HT     V+VT        G+LF +GD ++ +LGH      L
Sbjct: 229 EVESLSGLKTIAVACGVWHTAAIVEVIVTQSSATVSAGKLFTWGDGDKHRLGHGDKEARL 288

Query: 472 EPT 474
            PT
Sbjct: 289 NPT 291



 Score = 82.0 bits (201), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 80/280 (28%), Positives = 129/280 (46%), Gaps = 20/280 (7%)

Query: 207 PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 266
           P+ +E+   +    V  G+     +T  G V T G ++ G+LGHG   D   P+ +  L 
Sbjct: 68  PKPLESNLVLDVYHVDCGVRHASLVTRSGEVFTWGEDSGGRLGHGTREDSVHPRLVESLA 127

Query: 267 EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC--LGHGEQHDELQPRAIQTFRRKGIH 324
              ++  +A G  +  AVT  G +Y++G G++    LGHG       PR I +   +G+ 
Sbjct: 128 AC-NIDFVACGEFHTCAVTTTGELYTWGDGTHNVGLLGHGTDVGHWIPRRI-SGALEGLQ 185

Query: 325 VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP---EPLSSLKS------- 374
           V  VS G  H   + S G ++T+G G  G LGHG+    + P   E LS LK+       
Sbjct: 186 VAYVSCGTWHTALITSMGQLFTFGDGSFGVLGHGNVKSISCPREVESLSGLKTIAVACGV 245

Query: 375 -HLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVS 433
            H A  V     ++   V  G ++ +G      LG  D+   +  L P  + SL  +   
Sbjct: 246 WHTAAIVEVIVTQSSATVSAGKLFTWGDGDKHRLGHGDK---EARLNPTCVASLIDYDFY 302

Query: 434 QISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG--CL 471
           +++ G   TV +T  G+++  G++   QLG+    G  CL
Sbjct: 303 RVACGHSLTVGLTTSGKVWTMGNSVYGQLGNPNSDGRPCL 342



 Score = 73.2 bits (178), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 61/221 (27%), Positives = 104/221 (47%), Gaps = 18/221 (8%)

Query: 116 ITTGRYHTLLISN-SSVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSASEN 173
           ++ G +HT LI++   +F+ G    GVLGHG    + +S  R +   S    + V+    
Sbjct: 189 VSCGTWHTALITSMGQLFTFGDGSFGVLGHG--NVKSISCPREVESLSGLKTIAVACGVW 246

Query: 174 HAAFVLQ-----------SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 222
           H A +++           +G++FT GD      GH D       P  V +L      +V 
Sbjct: 247 HTAAIVEVIVTQSSATVSAGKLFTWGDGDKHRLGHGD-KEARLNPTCVASLIDYDFYRVA 305

Query: 223 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 282
            G + T  LT  G V T G++ +GQLG+ ++  RP         E   V+Q+A G  ++ 
Sbjct: 306 CGHSLTVGLTTSGKVWTMGNSVYGQLGNPNSDGRPCLVGDKITNE--HVLQVACGSYHVS 363

Query: 283 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGI 323
            +T    V+++G G+N  LGHG+  D+  P  ++  + + +
Sbjct: 364 VLTSRSEVFTWGKGANGRLGHGDIEDQKVPTLVEALKDRSV 404



 Score = 66.2 bits (160), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 49/155 (31%), Positives = 71/155 (45%), Gaps = 2/155 (1%)

Query: 323 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCA 382
           + V  V  G  H   +  SG V+TWG+   G LGHG   D   P  + SL +     V  
Sbjct: 77  LDVYHVDCGVRHASLVTRSGEVFTWGEDSGGRLGHGTREDSVHPRLVESLAACNIDFVAC 136

Query: 383 RKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPR-ILDSLRAHHVSQISTGLYH 441
            +  T  +  TG +Y +G  G  ++G    G       PR I  +L    V+ +S G +H
Sbjct: 137 GEFHTCAVTTTGELYTWG-DGTHNVGLLGHGTDVGHWIPRRISGALEGLQVAYVSCGTWH 195

Query: 442 TVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 476
           T ++T  G+LF FGD     LGH  ++    P E+
Sbjct: 196 TALITSMGQLFTFGDGSFGVLGHGNVKSISCPREV 230



 Score = 52.8 bits (125), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 46/149 (30%), Positives = 67/149 (44%), Gaps = 14/149 (9%)

Query: 339 DSSGYVYTWGKGYC--GALGHGDEI-------DKTLPEPLSSLKSHLAVQVCARKRKTFV 389
           DS G VY WG+  C   A    D +       D  LP+PL S        V    R   +
Sbjct: 32  DSLGDVYVWGEVVCDNSARTSSDTVIRSTGKTDFLLPKPLESNLVLDVYHVDCGVRHASL 91

Query: 390 LVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRG 449
           +  +G V+ +G    G LG    G  +  + PR+++SL A ++  ++ G +HT  VT  G
Sbjct: 92  VTRSGEVFTWGEDSGGRLGH---GTREDSVHPRLVESLAACNIDFVACGEFHTCAVTTTG 148

Query: 450 RLFGFGD--NERAQLGHDTLRGCLEPTEI 476
            L+ +GD  +    LGH T  G   P  I
Sbjct: 149 ELYTWGDGTHNVGLLGHGTDVGHWIPRRI 177


>gi|397515719|ref|XP_003828093.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Pan paniscus]
          Length = 4798

 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 103/339 (30%), Positives = 166/339 (48%), Gaps = 17/339 (5%)

Query: 115  QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQV---SA 170
            Q+  G+  T +I +N +V +CG    G LG G      V  T I+      V Q+     
Sbjct: 3968 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHV-LTVISALQGFVVTQLVTSCG 4026

Query: 171  SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
            S+ H+  + +SG+VF+ GD      GH +++R   RPR +EAL+G    Q++ G   +  
Sbjct: 4027 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQMSCGFKHSAV 4085

Query: 231  LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSVVQIAAGPSYMLAVTGNG 288
            +T  G + T G+  +G+LG G+T ++  P+ +  LE  ++G   Q+A G ++ LAV+ +G
Sbjct: 4086 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIG---QVACGLNHTLAVSVDG 4142

Query: 289  -VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 347
             +V++FG G    LG G    +  P+ I      GI + +V+ G +  VAL   G+VYT+
Sbjct: 4143 SMVWAFGDGDYGKLGLGNSTAKSSPQKIDVL--CGIGIKKVACGTQFSVALTKDGHVYTF 4200

Query: 348  GKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSL 407
            G+     L  G   +   P+ +  L   +   V      T  L   G VY +G    G L
Sbjct: 4201 GQDRLIGLPEGRARNHNRPQQIPVLAGVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQL 4260

Query: 408  GFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT 446
            G    G ++ V  P ++  L+  +V QIS G  H+   T
Sbjct: 4261 GL---GHTNHVREPTLVTGLQGKNVRQISAGRCHSAAWT 4296



 Score =  109 bits (273), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 105/379 (27%), Positives = 165/379 (43%), Gaps = 29/379 (7%)

Query: 96  FLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFT 155
           F +    +SD   T A    I TG    ++     V+  GS+    L  G   TQ     
Sbjct: 340 FEEVCRMASDYSRTCASPDSIQTGDA-PIVSETCEVYVWGSNSSHQLVEG---TQEKILQ 395

Query: 156 RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTN------RPIFRPRL 209
               PS +    + A +     +   G V  CG  S    G  D+N      +  F P  
Sbjct: 396 PKLAPSFSDAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPH- 454

Query: 210 VEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG 269
             ++K V   + + G   T   T  G V + G   +G+LGHG++  +  PK I    +  
Sbjct: 455 -RSIKKVSSSKGSDG--HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGK 511

Query: 270 SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS 329
            VV ++AG  +  AVT +G +Y++G G    LGHG+ +     R I T  +   +V  VS
Sbjct: 512 VVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNS----RNIPTLVKDISNVGEVS 567

Query: 330 AGDEHVVALDSSGY-VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTF 388
            G  H +AL   G  V+++G G  G LGHGD      P+ + +L+     +VCA  + + 
Sbjct: 568 CGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSL 627

Query: 389 VLVDTGSVYGFG---WMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVV 445
            L  TG VY +G    +G GS            LRP++++ L A  +  +S G  H + +
Sbjct: 628 ALTSTGQVYAWGCGACLGCGS-------SEATALRPKLIEELAATRIVDVSIGDSHCLAL 680

Query: 446 TDRGRLFGFGDNERAQLGH 464
           +    ++ +G+N   Q G 
Sbjct: 681 SHDNEVYAWGNNSMGQCGQ 699



 Score = 98.6 bits (244), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 93/267 (34%), Positives = 130/267 (48%), Gaps = 16/267 (5%)

Query: 122 HTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ-VSASENHAAFVL 179
           HTL   +   VFS G    G LGHG  +TQ      I  P    VV  VSA   H+A V 
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYP-KLIQGPLQGKVVVCVSAGYRHSAAVT 527

Query: 180 QSGQVFTCGDNSSFCCGHRDTN-RPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH-V 237
           + G+++T G+      GH D+N R I  P LV+ +  V   +V+ G + T  L+  G  V
Sbjct: 528 EDGELYTWGEGDFGRLGHGDSNSRNI--PTLVKDISNV--GEVSCGSSHTIALSKDGRTV 583

Query: 238 HTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 297
            + G   +G+LGHGDT     PK I  L+ +  + ++ AG    LA+T  G VY++G G+
Sbjct: 584 WSFGGGDNGKLGHGDTNRVYKPKVIEALQGM-FIRKVCAGSQSSLALTSTGQVYAWGCGA 642

Query: 298 NFCLGHG-EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 356
             CLG G  +   L+P+ I+        +V VS GD H +AL     VY WG    G  G
Sbjct: 643 --CLGCGSSEATALRPKLIEEL--AATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCG 698

Query: 357 HGDEIDK-TLPEPLSSLKSHLAVQVCA 382
            G+     T P+ +S L      Q+ A
Sbjct: 699 QGNSTGPITKPKKVSGLDGIAIQQISA 725



 Score = 96.3 bits (238), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 87/320 (27%), Positives = 147/320 (45%), Gaps = 13/320 (4%)

Query: 160  PSAAHVVQVSASENHAAFVLQS-GQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPC 218
            PS +   QV   +N   FV+Q+ G V  CG+ S    G  +++  +    ++ AL+G   
Sbjct: 3961 PSFSQAQQVICGQN-CTFVIQANGTVLACGEGSYGRLGQGNSDD-LHVLTVISALQGFVV 4018

Query: 219  KQVTAGLNFTGF---LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA 275
             Q+       G    LT  G V + G   +G+LGHG++  +  P+ I  L+    VVQ++
Sbjct: 4019 TQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQG-EEVVQMS 4077

Query: 276  AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHV 335
             G  +   VT +G +++FG+G    LG G   ++  P  +     +G  + +V+ G  H 
Sbjct: 4078 CGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTAL--EGYQIGQVACGLNHT 4135

Query: 336  VALDSSG-YVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 394
            +A+   G  V+ +G G  G LG G+   K+ P+ +  L      +V    + +  L   G
Sbjct: 4136 LAVSVDGSMVWAFGDGDYGKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDG 4195

Query: 395  SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 454
             VY FG      +G P+ G +    RP+ +  L    +  ++ G  HT+ +   G ++ +
Sbjct: 4196 HVYTFGQDRL--IGLPE-GRARNHNRPQQIPVLAGVIIEDVAVGAEHTLALASNGDVYAW 4252

Query: 455  GDNERAQLGHDTLRGCLEPT 474
            G N   QLG        EPT
Sbjct: 4253 GSNSEGQLGLGHTNHVREPT 4272



 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 68/230 (29%), Positives = 108/230 (46%), Gaps = 11/230 (4%)

Query: 237  VHTCGSNTHGQLGH-GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 295
            V+  G+  HGQL   G  +  P   + AP        Q+  G +    +  NG V + G 
Sbjct: 3936 VYLWGAGRHGQLAEAGRNVMVP---AAAP--SFSQAQQVICGQNCTFVIQANGTVLACGE 3990

Query: 296  GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG-DEHVVALDSSGYVYTWGKGYCGA 354
            GS   LG G   D      I   +   +  +  S G D H +AL  SG V++WG G  G 
Sbjct: 3991 GSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGK 4050

Query: 355  LGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGV 414
            LGHG+   +  P  + +L+    VQ+    + + V+   G ++ FG   +G LG  +   
Sbjct: 4051 LGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN--T 4108

Query: 415  SDKVLRPRILDSLRAHHVSQISTGLYHTVVVT-DRGRLFGFGDNERAQLG 463
            S+K L P  + +L  + + Q++ GL HT+ V+ D   ++ FGD +  +LG
Sbjct: 4109 SNKKL-PERVTALEGYQIGQVACGLNHTLAVSVDGSMVWAFGDGDYGKLG 4157



 Score = 49.3 bits (116), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 29/100 (29%), Positives = 48/100 (48%), Gaps = 2/100 (2%)

Query: 125 LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQV 184
           L S   V++ G   C  LG G      +    I   +A  +V VS  ++H   +    +V
Sbjct: 629 LTSTGQVYAWGCGAC--LGCGSSEATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEV 686

Query: 185 FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           +  G+NS   CG  ++  PI +P+ V  L G+  +Q++AG
Sbjct: 687 YAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAG 726



 Score = 49.3 bits (116), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 41/143 (28%), Positives = 67/143 (46%), Gaps = 9/143 (6%)

Query: 344  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 403
            VY WG G  G L    E  + +  P ++     A QV   +  TFV+   G+V   G   
Sbjct: 3936 VYLWGAGRHGQLA---EAGRNVMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGS 3992

Query: 404  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLY---HTVVVTDRGRLFGFGDNERA 460
            +G LG   +G SD +    ++ +L+   V+Q+ T      H++ +T+ G +F +GD +  
Sbjct: 3993 YGRLG---QGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYG 4049

Query: 461  QLGHDTLRGCLEPTEIFIQEMEE 483
            +LGH        P +I   + EE
Sbjct: 4050 KLGHGNSDRQRRPRQIEALQGEE 4072


>gi|326923406|ref|XP_003207927.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
           1 [Meleagris gallopavo]
          Length = 1048

 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 98/296 (33%), Positives = 139/296 (46%), Gaps = 12/296 (4%)

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
           H  FVL  G V+TCG N     GH    +   RP  V AL       V+ G   T  L  
Sbjct: 45  HTVFVLDDGTVYTCGCNDLGQLGHEKARK---RPEHVGALDAQNIVAVSCGEAHTLALND 101

Query: 234 RGHVHTCGSNTHGQLGHGDTLD-RPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
           +G V+  G  T GQLG   T +    P++I  L E+  +VQ+A G  + LA++    V+S
Sbjct: 102 KGQVYAWGLATDGQLGLPGTEECIRVPRNIKSLSEI-QIVQVACGYYHSLALSKGSEVFS 160

Query: 293 FGSGSNFCLGHG-EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 351
           +G      LG G E   +  P  I++    GI   +++AG  H   L  SG ++ WG+  
Sbjct: 161 WGQNKYGQLGLGYEYKKQNSPHVIKSLL--GIPFAQIAAGGAHSFVLTLSGAIFGWGRNK 218

Query: 352 CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 411
            G LG  D+ D+ +P  L SL++   V +C  +  T  L   G V+ FG  G+G LG   
Sbjct: 219 FGQLGLNDDNDRYVPTLLKSLRTQKVVHICCGEDHTAALTKEGGVFTFGAGGYGQLG--- 275

Query: 412 RGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV-VTDRGRLFGFGDNERAQLGHDT 466
              +   + PR +  L    V+QI+ G  HT   V   GR++ FG     QLG  T
Sbjct: 276 HNSTSHEINPRKVFELMGSLVTQITCGRQHTTAFVPSSGRIYSFGLGGNGQLGTGT 331



 Score =  122 bits (305), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 89/276 (32%), Positives = 137/276 (49%), Gaps = 10/276 (3%)

Query: 204 IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 263
           +  PR  +       + V  GL  T F+   G V+TCG N  GQLGH     R  P+ + 
Sbjct: 22  VLEPRKSDFFLNKRIRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKA--RKRPEHVG 79

Query: 264 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLG-HGEQHDELQPRAIQTFRRKG 322
            L+   ++V ++ G ++ LA+   G VY++G  ++  LG  G +     PR I++     
Sbjct: 80  ALD-AQNIVAVSCGEAHTLALNDKGQVYAWGLATDGQLGLPGTEECIRVPRNIKSLSE-- 136

Query: 323 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK-TLPEPLSSLKSHLAVQVC 381
           I +V+V+ G  H +AL     V++WG+   G LG G E  K   P  + SL      Q+ 
Sbjct: 137 IQIVQVACGYYHSLALSKGSEVFSWGQNKYGQLGLGYEYKKQNSPHVIKSLLGIPFAQIA 196

Query: 382 ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYH 441
           A    +FVL  +G+++G+G   FG LG  D   +D+ + P +L SLR   V  I  G  H
Sbjct: 197 AGGAHSFVLTLSGAIFGWGRNKFGQLGLNDD--NDRYV-PTLLKSLRTQKVVHICCGEDH 253

Query: 442 TVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF 477
           T  +T  G +F FG     QLGH++    + P ++F
Sbjct: 254 TAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVF 289



 Score =  105 bits (263), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 82/291 (28%), Positives = 135/291 (46%), Gaps = 8/291 (2%)

Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 179
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V VS  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKARKRPEHVGALD---AQNIVAVSCGEAHTLALN 100

Query: 180 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 239
             GQV+  G  +    G   T   I  PR +++L  +   QV  G   +  L+    V +
Sbjct: 101 DKGQVYAWGLATDGQLGLPGTEECIRVPRNIKSLSEIQIVQVACGYYHSLALSKGSEVFS 160

Query: 240 CGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
            G N +GQLG G +   + +P  I  L  +    QIAAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKYGQLGLGYEYKKQNSPHVIKSLLGI-PFAQIAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 299 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 358
             LG  + +D   P  +++ R +   VV +  G++H  AL   G V+T+G G  G LGH 
Sbjct: 220 GQLGLNDDNDRYVPTLLKSLRTQ--KVVHICCGEDHTAALTKEGGVFTFGAGGYGQLGHN 277

Query: 359 DEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLG 408
               +  P  +  L   L  Q+ C R+  T  +  +G +Y FG  G G LG
Sbjct: 278 STSHEINPRKVFELMGSLVTQITCGRQHTTAFVPSSGRIYSFGLGGNGQLG 328



 Score =  104 bits (260), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 79/254 (31%), Positives = 124/254 (48%), Gaps = 7/254 (2%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSASEN 173
           ++ G  HTL +++   V++ G +  G LG  P T +C+   R I   S   +VQV+    
Sbjct: 89  VSCGEAHTLALNDKGQVYAWGLATDGQLGL-PGTEECIRVPRNIKSLSEIQIVQVACGYY 147

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
           H+  + +  +VF+ G N     G     +    P ++++L G+P  Q+ AG   +  LT+
Sbjct: 148 HSLALSKGSEVFSWGQNKYGQLGLGYEYKKQNSPHVIKSLLGIPFAQIAAGGAHSFVLTL 207

Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
            G +   G N  GQLG  D  DR  P  +  L     VV I  G  +  A+T  G V++F
Sbjct: 208 SGAIFGWGRNKFGQLGLNDDNDRYVPTLLKSLR-TQKVVHICCGEDHTAALTKEGGVFTF 266

Query: 294 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA-LDSSGYVYTWGKGYC 352
           G+G    LGH     E+ PR +  F   G  V +++ G +H  A + SSG +Y++G G  
Sbjct: 267 GAGGYGQLGHNSTSHEINPRKV--FELMGSLVTQITCGRQHTTAFVPSSGRIYSFGLGGN 324

Query: 353 GALGHGDEIDKTLP 366
           G LG G   ++  P
Sbjct: 325 GQLGTGTTSNRKSP 338



 Score = 78.2 bits (191), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 67/206 (32%), Positives = 97/206 (47%), Gaps = 6/206 (2%)

Query: 114 MQITTGRYHTLLISN-SSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +Q+  G YH+L +S  S VFS G +  G LG G E  +  S   I         Q++A  
Sbjct: 140 VQVACGYYHSLALSKGSEVFSWGQNKYGQLGLGYEYKKQNSPHVIKSLLGIPFAQIAAGG 199

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            H+  +  SG +F  G N     G  D N   + P L+++L+      +  G + T  LT
Sbjct: 200 AHSFVLTLSGAIFGWGRNKFGQLGLNDDNDR-YVPTLLKSLRTQKVVHICCGEDHTAALT 258

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVV 290
             G V T G+  +GQLGH  T     P+ +   E +GS+V QI  G  +  A V  +G +
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSLVTQITCGRQHTTAFVPSSGRI 316

Query: 291 YSFGSGSNFCLGHGEQHDELQPRAIQ 316
           YSFG G N  LG G   +   P  ++
Sbjct: 317 YSFGLGGNGQLGTGTTSNRKSPFTVK 342


>gi|115461450|ref|NP_001054325.1| Os04g0686200 [Oryza sativa Japonica Group]
 gi|38345822|emb|CAD41927.2| OSJNBa0070M12.5 [Oryza sativa Japonica Group]
 gi|113565896|dbj|BAF16239.1| Os04g0686200 [Oryza sativa Japonica Group]
 gi|222629813|gb|EEE61945.1| hypothetical protein OsJ_16701 [Oryza sativa Japonica Group]
          Length = 1057

 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 100/332 (30%), Positives = 158/332 (47%), Gaps = 23/332 (6%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V  V+    HAA V +  +VFT G+  S   GH      IF+PRLVE+L     + +  G
Sbjct: 263 VSYVACGVKHAALVTRQAEVFTWGEECSGRLGH-GAGTSIFQPRLVESLSICNVETIACG 321

Query: 225 LNFTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSYM 281
              T  +T  G ++T G  TH  G LGHG  +    PK ++ PLE +  V  ++ G  + 
Sbjct: 322 EFHTCAITATGDLYTWGDGTHNAGLLGHGSNVSHWIPKRVSGPLEGL-QVSAVSCGTWHT 380

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL--- 338
             +T +G +Y+FG G+   LGHG +     P+ +++   KG+  + VS G  H  A+   
Sbjct: 381 ALITSSGKLYTFGDGTFGVLGHGNRETISYPKEVESL--KGLRTISVSCGVWHTAAVVEV 438

Query: 339 ------DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVD 392
                  SSG ++TWG G    LGHGD   K  P  + SL  +   +       T  L  
Sbjct: 439 IMAQSNTSSGKLFTWGDGDKYRLGHGDRSSKLKPTCVPSLIDYNFHKAVCGHTLTIGLTT 498

Query: 393 TGSVYGFGWMGFGSLGFPDRGVSDKVLRPRIL-DSLRAHHVSQISTGLYHTVVVTDRGRL 451
           +G ++  G   +G LG P+    +    PR++ + L    V +++ G YH  V+T  G +
Sbjct: 499 SGHIFTAGSSVYGQLGNPN----NDGRYPRLVEEKLGGGGVVEVACGAYHVAVLTQSGEV 554

Query: 452 FGFGDNERAQLGHDTLRGCLEPTEIFIQEMEE 483
           + +G     +LGH  +     PT  F++ + +
Sbjct: 555 YTWGKGANGRLGHGDIADRKTPT--FVEALRD 584



 Score = 96.3 bits (238), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 88/299 (29%), Positives = 137/299 (45%), Gaps = 22/299 (7%)

Query: 116 ITTGRYHTLLISNSS---VFSCGSSLCGVLGHGPETTQCVSFTRINFP-SAAHVVQVSAS 171
           I  G +HT  I+ +     +  G+   G+LGHG   +  +   R++ P     V  VS  
Sbjct: 318 IACGEFHTCAITATGDLYTWGDGTHNAGLLGHGSNVSHWIP-KRVSGPLEGLQVSAVSCG 376

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGH--RDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
             H A +  SG+++T GD +    GH  R+T   I  P+ VE+LKG+    V+ G+  T 
Sbjct: 377 TWHTALITSSGKLYTFGDGTFGVLGHGNRET---ISYPKEVESLKGLRTISVSCGVWHTA 433

Query: 230 FL---------TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 280
            +         T  G + T G     +LGHGD   +  P  +  L +  +  +   G + 
Sbjct: 434 AVVEVIMAQSNTSSGKLFTWGDGDKYRLGHGDRSSKLKPTCVPSLIDY-NFHKAVCGHTL 492

Query: 281 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 340
            + +T +G +++ GS     LG+   +D   PR ++  +  G  VV V+ G  HV  L  
Sbjct: 493 TIGLTTSGHIFTAGSSVYGQLGN-PNNDGRYPRLVEE-KLGGGGVVEVACGAYHVAVLTQ 550

Query: 341 SGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGF 399
           SG VYTWGKG  G LGHGD  D+  P  + +L+     ++      T  +    SV G 
Sbjct: 551 SGEVYTWGKGANGRLGHGDIADRKTPTFVEALRDRSVKRIACGSGFTAAICQHKSVSGM 609



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 85/338 (25%), Positives = 150/338 (44%), Gaps = 20/338 (5%)

Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 179
           ++  L+   + VF+ G    G LGHG  T+       +   S  +V  ++  E H   + 
Sbjct: 271 KHAALVTRQAEVFTWGEECSGRLGHGAGTS-IFQPRLVESLSICNVETIACGEFHTCAIT 329

Query: 180 QSGQVFTCGD--NSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHV 237
            +G ++T GD  +++   GH          R+   L+G+    V+ G   T  +T  G +
Sbjct: 330 ATGDLYTWGDGTHNAGLLGHGSNVSHWIPKRVSGPLEGLQVSAVSCGTWHTALITSSGKL 389

Query: 238 HTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV---------TGNG 288
           +T G  T G LGHG+      PK +  L+ +   + ++ G  +  AV         T +G
Sbjct: 390 YTFGDGTFGVLGHGNRETISYPKEVESLKGL-RTISVSCGVWHTAAVVEVIMAQSNTSSG 448

Query: 289 VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 348
            ++++G G  + LGHG++  +L+P  + +      H  +   G    + L +SG+++T G
Sbjct: 449 KLFTWGDGDKYRLGHGDRSSKLKPTCVPSLIDYNFH--KAVCGHTLTIGLTTSGHIFTAG 506

Query: 349 KGYCGALGHGDEIDKTLPEPL-SSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSL 407
               G LG+ +  D   P  +   L     V+V        VL  +G VY +G    G L
Sbjct: 507 SSVYGQLGNPNN-DGRYPRLVEEKLGGGGVVEVACGAYHVAVLTQSGEVYTWGKGANGRL 565

Query: 408 GFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVV 445
           G  D  ++D+   P  +++LR   V +I+ G   T  +
Sbjct: 566 GHGD--IADRKT-PTFVEALRDRSVKRIACGSGFTAAI 600



 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 75/272 (27%), Positives = 123/272 (45%), Gaps = 16/272 (5%)

Query: 204 IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 263
           I  P+ +E+   +    V  G+     +T +  V T G    G+LGHG       P+ + 
Sbjct: 249 ILVPKPLESNVMLDVSYVACGVKHAALVTRQAEVFTWGEECSGRLGHGAGTSIFQPRLVE 308

Query: 264 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC--LGHGEQHDELQPRAIQTFRRK 321
            L  + +V  IA G  +  A+T  G +Y++G G++    LGHG       P+ + +   +
Sbjct: 309 SL-SICNVETIACGEFHTCAITATGDLYTWGDGTHNAGLLGHGSNVSHWIPKRV-SGPLE 366

Query: 322 GIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVC 381
           G+ V  VS G  H   + SSG +YT+G G  G LGHG+    + P+ + SLK    + V 
Sbjct: 367 GLQVSAVSCGTWHTALITSSGKLYTFGDGTFGVLGHGNRETISYPKEVESLKGLRTISVS 426

Query: 382 ARKRKTFVLVD---------TGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHV 432
                T  +V+         +G ++ +G      LG  DR      L+P  + SL  ++ 
Sbjct: 427 CGVWHTAAVVEVIMAQSNTSSGKLFTWGDGDKYRLGHGDRSSK---LKPTCVPSLIDYNF 483

Query: 433 SQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 464
            +   G   T+ +T  G +F  G +   QLG+
Sbjct: 484 HKAVCGHTLTIGLTTSGHIFTAGSSVYGQLGN 515



 Score = 56.2 bits (134), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 44/155 (28%), Positives = 66/155 (42%), Gaps = 2/155 (1%)

Query: 323 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCA 382
           + V  V+ G +H   +     V+TWG+   G LGHG       P  + SL       +  
Sbjct: 261 LDVSYVACGVKHAALVTRQAEVFTWGEECSGRLGHGAGTSIFQPRLVESLSICNVETIAC 320

Query: 383 RKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRP-RILDSLRAHHVSQISTGLYH 441
            +  T  +  TG +Y +G  G  + G    G +     P R+   L    VS +S G +H
Sbjct: 321 GEFHTCAITATGDLYTWG-DGTHNAGLLGHGSNVSHWIPKRVSGPLEGLQVSAVSCGTWH 379

Query: 442 TVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 476
           T ++T  G+L+ FGD     LGH        P E+
Sbjct: 380 TALITSSGKLYTFGDGTFGVLGHGNRETISYPKEV 414


>gi|147857410|emb|CAN82853.1| hypothetical protein VITISV_028768 [Vitis vinifera]
          Length = 1156

 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 97/312 (31%), Positives = 148/312 (47%), Gaps = 19/312 (6%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V ++S    HAA V + G+VF  G+ S    GH+  N  +  P++VE+L GV  K V+ G
Sbjct: 309 VREISLGGKHAALVTKHGEVFCWGEGSGGXLGHK-VNMDMGNPKIVESLTGVLVKSVSCG 367

Query: 225 LNFTGFLTIRGHVHTCGSNTHG--QLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 282
              T  LT  G ++T G N  G   +G      +  P  ++      S+  +A G  +M 
Sbjct: 368 EYQTCALTHSGELYTWGDNGSGIDLVGERRKRSQWIPSRLSGPLNGTSISNVACGEWHMA 427

Query: 283 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL---- 338
            V+ +G ++++G G+   LGHG+     QP+ +++    G+ V   + G  H  A+    
Sbjct: 428 IVSTSGQLFTYGDGTFGVLGHGKLESISQPKEVESL--SGLWVKAAACGPWHTAAIVEVR 485

Query: 339 -------DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 391
                     G ++TWG G  G LGHGD+  K LP  ++ L  H  VQV   +  T  L 
Sbjct: 486 ADRLKFNTKGGKLFTWGDGDKGRLGHGDQERKLLPTCVAQLVDHDFVQVSCGRMLTVGLT 545

Query: 392 DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRL 451
             G+VY  G    G LG P     DK +   +   L+   V +IS+G YH   +T +G L
Sbjct: 546 CLGTVYTMGSAVHGQLGNPQ--AKDKSI-AIVGGKLKDEFVKEISSGSYHVAALTSKGSL 602

Query: 452 FGFGDNERAQLG 463
           + +G     QLG
Sbjct: 603 YTWGMGANGQLG 614



 Score = 99.0 bits (245), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 88/285 (30%), Positives = 138/285 (48%), Gaps = 22/285 (7%)

Query: 106 IVETSAGNM--QITTGRYHTLLISNS-SVFSCGSSLCGV--LGHGPETTQCVSFTRINFP 160
           IVE+  G +   ++ G Y T  +++S  +++ G +  G+  +G   + +Q +  +R++ P
Sbjct: 352 IVESLTGVLVKSVSCGEYQTCALTHSGELYTWGDNGSGIDLVGERRKRSQWIP-SRLSGP 410

Query: 161 -SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCK 219
            +   +  V+  E H A V  SGQ+FT GD +    GH      I +P+ VE+L G+  K
Sbjct: 411 LNGTSISNVACGEWHMAIVSTSGQLFTYGDGTFGVLGHGKLES-ISQPKEVESLSGLWVK 469

Query: 220 QVTAGLNFTG-----------FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEV 268
               G   T            F T  G + T G    G+LGHGD   +  P  +A L + 
Sbjct: 470 AAACGPWHTAAIVEVRADRLKFNTKGGKLFTWGDGDKGRLGHGDQERKLLPTCVAQLVD- 528

Query: 269 GSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRV 328
              VQ++ G    + +T  G VY+ GS  +  LG+ +  D  +  AI   + K   V  +
Sbjct: 529 HDFVQVSCGRMLTVGLTCLGTVYTMGSAVHGQLGNPQAKD--KSIAIVGGKLKDEFVKEI 586

Query: 329 SAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
           S+G  HV AL S G +YTWG G  G LG GD  D+  P  + +L+
Sbjct: 587 SSGSYHVAALTSKGSLYTWGMGANGQLGLGDTEDRNSPAVVEALR 631



 Score = 78.2 bits (191), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 53/187 (28%), Positives = 87/187 (46%), Gaps = 8/187 (4%)

Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 349
           VY FG+       +G Q D L P+ +++     + V  +S G +H   +   G V+ WG+
Sbjct: 282 VYRFGNQ------NGMQSDALLPKLLESTTM--LDVREISLGGKHAALVTKHGEVFCWGE 333

Query: 350 GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGF 409
           G  G LGH   +D   P+ + SL   L   V   + +T  L  +G +Y +G  G G    
Sbjct: 334 GSGGXLGHKVNMDMGNPKIVESLTGVLVKSVSCGEYQTCALTHSGELYTWGDNGSGIDLV 393

Query: 410 PDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG 469
            +R    + +  R+   L    +S ++ G +H  +V+  G+LF +GD     LGH  L  
Sbjct: 394 GERRKRSQWIPSRLSGPLNGTSISNVACGEWHMAIVSTSGQLFTYGDGTFGVLGHGKLES 453

Query: 470 CLEPTEI 476
             +P E+
Sbjct: 454 ISQPKEV 460



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 62/218 (28%), Positives = 100/218 (45%), Gaps = 19/218 (8%)

Query: 271 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 330
           V +I+ G  +   VT +G V+ +G GS   LGH    D   P+ +++    G+ V  VS 
Sbjct: 309 VREISLGGKHAALVTKHGEVFCWGEGSGGXLGHKVNMDMGNPKIVESL--TGVLVKSVSC 366

Query: 331 GDEHVVALDSSGYVYTWGKGYCGA--LGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTF 388
           G+    AL  SG +YTWG    G   +G   +  + +P  LS   +  ++   A      
Sbjct: 367 GEYQTCALTHSGELYTWGDNGSGIDLVGERRKRSQWIPSRLSGPLNGTSISNVACGEWHM 426

Query: 389 VLVDT-GSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVV-- 445
            +V T G ++ +G   FG LG    G  + + +P+ ++SL    V   + G +HT  +  
Sbjct: 427 AIVSTSGQLFTYGDGTFGVLG---HGKLESISQPKEVESLSGLWVKAAACGPWHTAAIVE 483

Query: 446 ---------TDRGRLFGFGDNERAQLGHDTLRGCLEPT 474
                    T  G+LF +GD ++ +LGH      L PT
Sbjct: 484 VRADRLKFNTKGGKLFTWGDGDKGRLGHGDQERKLLPT 521


>gi|410336797|gb|JAA37345.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
            RCC1 (CHC1)-like domain (RLD) 1 [Pan troglodytes]
          Length = 4854

 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 103/339 (30%), Positives = 166/339 (48%), Gaps = 17/339 (5%)

Query: 115  QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQV---SA 170
            Q+  G+  T +I +N +V +CG    G LG G      V  T I+      V Q+     
Sbjct: 4024 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHV-LTVISALQGFVVTQLVTSCG 4082

Query: 171  SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
            S+ H+  + +SG+VF+ GD      GH +++R   RPR +EAL+G    Q++ G   +  
Sbjct: 4083 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQMSCGFKHSAV 4141

Query: 231  LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSVVQIAAGPSYMLAVTGNG 288
            +T  G + T G+  +G+LG G+T ++  P+ +  LE  ++G   Q+A G ++ LAV+ +G
Sbjct: 4142 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIG---QVACGLNHTLAVSVDG 4198

Query: 289  -VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 347
             +V++FG G    LG G    +  P+ I      GI + +V+ G +  VAL   G+VYT+
Sbjct: 4199 SMVWAFGDGDYGKLGLGNSTAKSSPQKIDVL--CGIGIKKVACGTQFSVALTKDGHVYTF 4256

Query: 348  GKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSL 407
            G+     L  G   +   P+ +  L   +   V      T  L   G VY +G    G L
Sbjct: 4257 GQDRLIGLPEGRARNHNRPQQIPVLAGVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQL 4316

Query: 408  GFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT 446
            G    G ++ V  P ++  L+  +V QIS G  H+   T
Sbjct: 4317 GL---GHTNHVREPTLVTGLQGKNVRQISAGRCHSAAWT 4352



 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 105/379 (27%), Positives = 165/379 (43%), Gaps = 29/379 (7%)

Query: 96  FLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFT 155
           F +    +SD   T A    I TG    ++     V+  GS+    L  G   TQ     
Sbjct: 340 FEEVCRMASDYSRTCASPDSIQTGDA-PIVSETCEVYVWGSNSSHQLVEG---TQEKILQ 395

Query: 156 RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTN------RPIFRPRL 209
               PS +    + A +     +   G V  CG  S    G  D+N      +  F P  
Sbjct: 396 PKLAPSFSDAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPH- 454

Query: 210 VEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG 269
             ++K V   + + G   T   T  G V + G   +G+LGHG++  +  PK I    +  
Sbjct: 455 -RSIKKVSSSKGSDG--HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGK 511

Query: 270 SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS 329
            VV ++AG  +  AVT +G +Y++G G    LGHG+ +     R I T  +   +V  VS
Sbjct: 512 VVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNS----RNIPTLVKDISNVGEVS 567

Query: 330 AGDEHVVALDSSGY-VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTF 388
            G  H +AL   G  V+++G G  G LGHGD      P+ + +L+     +VCA  + + 
Sbjct: 568 CGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSL 627

Query: 389 VLVDTGSVYGFG---WMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVV 445
            L  TG VY +G    +G GS            LRP++++ L A  +  +S G  H + +
Sbjct: 628 ALTSTGQVYAWGCGACLGCGS-------SEATALRPKLIEELAATRIVDVSIGDSHCLAL 680

Query: 446 TDRGRLFGFGDNERAQLGH 464
           +    ++ +G+N   Q G 
Sbjct: 681 SHDNEVYAWGNNSMGQCGQ 699



 Score = 98.6 bits (244), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 91/266 (34%), Positives = 128/266 (48%), Gaps = 14/266 (5%)

Query: 122 HTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
           HTL   +   VFS G    G LGHG  +TQ              VV VSA   H+A V +
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528

Query: 181 SGQVFTCGDNSSFCCGHRDTN-RPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH-VH 238
            G+++T G+      GH D+N R I  P LV+ +  V   +V+ G + T  L+  G  V 
Sbjct: 529 DGELYTWGEGDFGRLGHGDSNSRNI--PTLVKDISNV--GEVSCGSSHTIALSKDGRTVW 584

Query: 239 TCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
           + G   +G+LGHGDT     PK I  L+ +  + ++ AG    LA+T  G VY++G G+ 
Sbjct: 585 SFGGGDNGKLGHGDTNRVYKPKVIEALQGM-FIRKVCAGSQSSLALTSTGQVYAWGCGA- 642

Query: 299 FCLGHG-EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 357
            CLG G  +   L+P+ I+        +V VS GD H +AL     VY WG    G  G 
Sbjct: 643 -CLGCGSSEATALRPKLIEEL--AATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQ 699

Query: 358 GDEIDK-TLPEPLSSLKSHLAVQVCA 382
           G+     T P+ +S L      Q+ A
Sbjct: 700 GNSTGPITKPKKVSGLDGIAIQQISA 725



 Score = 96.3 bits (238), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 87/320 (27%), Positives = 147/320 (45%), Gaps = 13/320 (4%)

Query: 160  PSAAHVVQVSASENHAAFVLQS-GQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPC 218
            PS +   QV   +N   FV+Q+ G V  CG+ S    G  +++  +    ++ AL+G   
Sbjct: 4017 PSFSQAQQVICGQN-CTFVIQANGTVLACGEGSYGRLGQGNSDD-LHVLTVISALQGFVV 4074

Query: 219  KQVTAGLNFTGF---LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA 275
             Q+       G    LT  G V + G   +G+LGHG++  +  P+ I  L+    VVQ++
Sbjct: 4075 TQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQG-EEVVQMS 4133

Query: 276  AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHV 335
             G  +   VT +G +++FG+G    LG G   ++  P  +     +G  + +V+ G  H 
Sbjct: 4134 CGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTAL--EGYQIGQVACGLNHT 4191

Query: 336  VALDSSG-YVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 394
            +A+   G  V+ +G G  G LG G+   K+ P+ +  L      +V    + +  L   G
Sbjct: 4192 LAVSVDGSMVWAFGDGDYGKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDG 4251

Query: 395  SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 454
             VY FG      +G P+ G +    RP+ +  L    +  ++ G  HT+ +   G ++ +
Sbjct: 4252 HVYTFGQDRL--IGLPE-GRARNHNRPQQIPVLAGVIIEDVAVGAEHTLALASNGDVYAW 4308

Query: 455  GDNERAQLGHDTLRGCLEPT 474
            G N   QLG        EPT
Sbjct: 4309 GSNSEGQLGLGHTNHVREPT 4328



 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 68/230 (29%), Positives = 108/230 (46%), Gaps = 11/230 (4%)

Query: 237  VHTCGSNTHGQLGH-GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 295
            V+  G+  HGQL   G  +  P   + AP        Q+  G +    +  NG V + G 
Sbjct: 3992 VYLWGAGRHGQLAEAGRNVMVP---AAAP--SFSQAQQVICGQNCTFVIQANGTVLACGE 4046

Query: 296  GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG-DEHVVALDSSGYVYTWGKGYCGA 354
            GS   LG G   D      I   +   +  +  S G D H +AL  SG V++WG G  G 
Sbjct: 4047 GSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGK 4106

Query: 355  LGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGV 414
            LGHG+   +  P  + +L+    VQ+    + + V+   G ++ FG   +G LG  +   
Sbjct: 4107 LGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN--T 4164

Query: 415  SDKVLRPRILDSLRAHHVSQISTGLYHTVVVT-DRGRLFGFGDNERAQLG 463
            S+K L P  + +L  + + Q++ GL HT+ V+ D   ++ FGD +  +LG
Sbjct: 4165 SNKKL-PERVTALEGYQIGQVACGLNHTLAVSVDGSMVWAFGDGDYGKLG 4213



 Score = 49.3 bits (116), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 29/100 (29%), Positives = 48/100 (48%), Gaps = 2/100 (2%)

Query: 125 LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQV 184
           L S   V++ G   C  LG G      +    I   +A  +V VS  ++H   +    +V
Sbjct: 629 LTSTGQVYAWGCGAC--LGCGSSEATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEV 686

Query: 185 FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           +  G+NS   CG  ++  PI +P+ V  L G+  +Q++AG
Sbjct: 687 YAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAG 726



 Score = 48.9 bits (115), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 41/143 (28%), Positives = 67/143 (46%), Gaps = 9/143 (6%)

Query: 344  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 403
            VY WG G  G L    E  + +  P ++     A QV   +  TFV+   G+V   G   
Sbjct: 3992 VYLWGAGRHGQLA---EAGRNVMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGS 4048

Query: 404  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLY---HTVVVTDRGRLFGFGDNERA 460
            +G LG   +G SD +    ++ +L+   V+Q+ T      H++ +T+ G +F +GD +  
Sbjct: 4049 YGRLG---QGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYG 4105

Query: 461  QLGHDTLRGCLEPTEIFIQEMEE 483
            +LGH        P +I   + EE
Sbjct: 4106 KLGHGNSDRQRRPRQIEALQGEE 4128


>gi|296213415|ref|XP_002753260.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 isoform 1
            [Callithrix jacchus]
 gi|390468428|ref|XP_003733941.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 isoform 2
            [Callithrix jacchus]
          Length = 4860

 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 102/339 (30%), Positives = 166/339 (48%), Gaps = 17/339 (5%)

Query: 115  QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQV---SA 170
            Q+  G+  T +I +N +V +CG    G LG G      V  T I+      V Q+     
Sbjct: 4030 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHV-LTVISALQGFVVTQLVTSCG 4088

Query: 171  SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
            S+ H+  + +SG+VF+ GD      GH +++R   RPR +EAL+G    Q++ G   +  
Sbjct: 4089 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQMSCGFKHSAV 4147

Query: 231  LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSVVQIAAGPSYMLAVTGNG 288
            +T  G + T G+  +G+LG G+T ++  P+ +  LE  ++G   Q+A G ++ LAV+ +G
Sbjct: 4148 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIG---QVACGLNHTLAVSADG 4204

Query: 289  -VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 347
             +V++FG G    LG G    +  P+ +      GI + +V+ G +  VAL   G+VYT+
Sbjct: 4205 SMVWAFGDGDYGKLGLGNSTAKSSPQKVDVL--CGIGIKKVACGTQFSVALTKDGHVYTF 4262

Query: 348  GKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSL 407
            G+     L  G   +   P+ +  L   +   V      T  L   G VY +G    G L
Sbjct: 4263 GQDRLIGLPEGRARNHNRPQQVPVLAGVVIEDVAVGAEHTLALASNGDVYAWGSNSEGQL 4322

Query: 408  GFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT 446
            G    G ++ V  P ++  L+  +V QIS G  H+   T
Sbjct: 4323 GL---GHTNHVREPTLVTGLQGKNVRQISAGRCHSAAWT 4358



 Score =  109 bits (273), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 90/315 (28%), Positives = 144/315 (45%), Gaps = 25/315 (7%)

Query: 160 PSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTN------RPIFRPRLVEAL 213
           PS +    + A +     +   G V  CG  S    G  D+N      +  F P    ++
Sbjct: 400 PSFSDAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPH--RSI 457

Query: 214 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
           K V   + + G   T   T  G V + G   +G+LGHG++  +  PK I    +   VV 
Sbjct: 458 KKVSSSKGSDG--HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVC 515

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           ++AG  +  AVT +G +Y++G G    LGHG+ +     R I T  +   +V  VS G  
Sbjct: 516 VSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNS----RNIPTLVKDISNVGEVSCGSS 571

Query: 334 HVVALDSSGY-VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVD 392
           H +AL   G  V+++G G  G LGHGD      P+ + +L+     +VCA  + +  L  
Sbjct: 572 HTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTS 631

Query: 393 TGSVYGFG---WMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRG 449
           TG VY +G    +G GS            LRP++++ L A  +  +S G  H + ++   
Sbjct: 632 TGQVYAWGCGACLGCGS-------SEATALRPKLIEELAATRIVDVSIGDSHCLALSHDN 684

Query: 450 RLFGFGDNERAQLGH 464
            ++ +G+N   Q G 
Sbjct: 685 EVYAWGNNSMGQCGQ 699



 Score = 98.6 bits (244), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 91/266 (34%), Positives = 128/266 (48%), Gaps = 14/266 (5%)

Query: 122 HTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
           HTL   +   VFS G    G LGHG  +TQ              VV VSA   H+A V +
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528

Query: 181 SGQVFTCGDNSSFCCGHRDTN-RPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH-VH 238
            G+++T G+      GH D+N R I  P LV+ +  V   +V+ G + T  L+  G  V 
Sbjct: 529 DGELYTWGEGDFGRLGHGDSNSRNI--PTLVKDISNV--GEVSCGSSHTIALSKDGRTVW 584

Query: 239 TCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
           + G   +G+LGHGDT     PK I  L+ +  + ++ AG    LA+T  G VY++G G+ 
Sbjct: 585 SFGGGDNGKLGHGDTNRVYKPKVIEALQGM-FIRKVCAGSQSSLALTSTGQVYAWGCGA- 642

Query: 299 FCLGHG-EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 357
            CLG G  +   L+P+ I+        +V VS GD H +AL     VY WG    G  G 
Sbjct: 643 -CLGCGSSEATALRPKLIEEL--AATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQ 699

Query: 358 GDEIDK-TLPEPLSSLKSHLAVQVCA 382
           G+     T P+ +S L      Q+ A
Sbjct: 700 GNSTGPITKPKKVSGLDGIAIQQISA 725



 Score = 96.7 bits (239), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 87/320 (27%), Positives = 148/320 (46%), Gaps = 13/320 (4%)

Query: 160  PSAAHVVQVSASENHAAFVLQS-GQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPC 218
            PS +   QV   +N   FV+Q+ G V  CG+ S    G  +++  +    ++ AL+G   
Sbjct: 4023 PSFSQAQQVICGQN-CTFVIQANGTVLACGEGSYGRLGQGNSDD-LHVLTVISALQGFVV 4080

Query: 219  KQVTAGLNFTGF---LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA 275
             Q+       G    LT  G V + G   +G+LGHG++  +  P+ I  L+    VVQ++
Sbjct: 4081 TQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQG-EEVVQMS 4139

Query: 276  AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHV 335
             G  +   VT +G +++FG+G    LG G   ++  P  +     +G  + +V+ G  H 
Sbjct: 4140 CGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTAL--EGYQIGQVACGLNHT 4197

Query: 336  VALDSSG-YVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 394
            +A+ + G  V+ +G G  G LG G+   K+ P+ +  L      +V    + +  L   G
Sbjct: 4198 LAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDG 4257

Query: 395  SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 454
             VY FG      +G P+ G +    RP+ +  L    +  ++ G  HT+ +   G ++ +
Sbjct: 4258 HVYTFGQDRL--IGLPE-GRARNHNRPQQVPVLAGVVIEDVAVGAEHTLALASNGDVYAW 4314

Query: 455  GDNERAQLGHDTLRGCLEPT 474
            G N   QLG        EPT
Sbjct: 4315 GSNSEGQLGLGHTNHVREPT 4334



 Score = 84.7 bits (208), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 68/230 (29%), Positives = 108/230 (46%), Gaps = 11/230 (4%)

Query: 237  VHTCGSNTHGQLGH-GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 295
            V+  G+  HGQL   G  +  P   + AP        Q+  G +    +  NG V + G 
Sbjct: 3998 VYLWGAGRHGQLAEAGRNVMVP---AAAP--SFSQAQQVICGQNCTFVIQANGTVLACGE 4052

Query: 296  GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG-DEHVVALDSSGYVYTWGKGYCGA 354
            GS   LG G   D      I   +   +  +  S G D H +AL  SG V++WG G  G 
Sbjct: 4053 GSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGK 4112

Query: 355  LGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGV 414
            LGHG+   +  P  + +L+    VQ+    + + V+   G ++ FG   +G LG  +   
Sbjct: 4113 LGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN--T 4170

Query: 415  SDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRL-FGFGDNERAQLG 463
            S+K L P  + +L  + + Q++ GL HT+ V+  G + + FGD +  +LG
Sbjct: 4171 SNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLG 4219



 Score = 60.1 bits (144), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 49/180 (27%), Positives = 82/180 (45%), Gaps = 13/180 (7%)

Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 349
           VY +GS S+  L  G Q   LQP+   +F         + AG      + + G V   GK
Sbjct: 374 VYVWGSNSSHQLVEGTQEKILQPKLAPSFS----DAQTIEAGQYCTFVISTDGSVRACGK 429

Query: 350 GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKR----KTFVLVDTGSVYGFGWMGFG 405
           G  G LG GD  +++  + L + + H +++  +  +     T      G V+ +G   +G
Sbjct: 430 GSYGRLGLGDSNNQSTLKKL-TFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYG 488

Query: 406 SLGFPDRGVSDKVLRPRILD-SLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 464
            LG    G S     P+++   L+   V  +S G  H+  VT+ G L+ +G+ +  +LGH
Sbjct: 489 KLG---HGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGH 545



 Score = 49.3 bits (116), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 29/100 (29%), Positives = 48/100 (48%), Gaps = 2/100 (2%)

Query: 125 LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQV 184
           L S   V++ G   C  LG G      +    I   +A  +V VS  ++H   +    +V
Sbjct: 629 LTSTGQVYAWGCGAC--LGCGSSEATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEV 686

Query: 185 FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           +  G+NS   CG  ++  PI +P+ V  L G+  +Q++AG
Sbjct: 687 YAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAG 726



 Score = 48.9 bits (115), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 41/143 (28%), Positives = 67/143 (46%), Gaps = 9/143 (6%)

Query: 344  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 403
            VY WG G  G L    E  + +  P ++     A QV   +  TFV+   G+V   G   
Sbjct: 3998 VYLWGAGRHGQLA---EAGRNVMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGS 4054

Query: 404  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLY---HTVVVTDRGRLFGFGDNERA 460
            +G LG   +G SD +    ++ +L+   V+Q+ T      H++ +T+ G +F +GD +  
Sbjct: 4055 YGRLG---QGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYG 4111

Query: 461  QLGHDTLRGCLEPTEIFIQEMEE 483
            +LGH        P +I   + EE
Sbjct: 4112 KLGHGNSDRQRRPRQIEALQGEE 4134


>gi|149574281|ref|XP_001514757.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1
            [Ornithorhynchus anatinus]
          Length = 4866

 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 101/339 (29%), Positives = 167/339 (49%), Gaps = 17/339 (5%)

Query: 115  QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQV---SA 170
            Q+  G+  T +I +N +V +CG    G LG G      V  T I+      V Q+     
Sbjct: 4036 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHV-LTVISALQGFVVTQLVTSCG 4094

Query: 171  SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
            S+ H+  + +SG+VF+ GD      GH +++R   RPR +EAL+G    Q++ G   +  
Sbjct: 4095 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQMSCGFKHSAV 4153

Query: 231  LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSVVQIAAGPSYMLAVTGNG 288
            +T  G + T G+  +G+LG G+T ++  P+ +  LE  ++G   Q+A G ++ LAV+ +G
Sbjct: 4154 VTADGKMFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIG---QVACGLNHTLAVSTDG 4210

Query: 289  -VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 347
             +V++FG G    LG G    +  P+ +      GI + +V+ G +  VAL   G+VYT+
Sbjct: 4211 SMVWAFGDGDYGKLGLGNSTAKSSPQKVDVL--CGIGIKKVACGTQFSVALTKDGHVYTF 4268

Query: 348  GKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSL 407
            G+     L  G   +   P+ +  L   +   V      T  +  TG VY +G    G L
Sbjct: 4269 GQDRLIGLPEGRARNHNRPQQVPVLAGVVIEDVAVGAEHTLAITSTGDVYAWGSNSEGQL 4328

Query: 408  GFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT 446
            G    G ++ V  P ++  L+  ++ QIS G  H+   T
Sbjct: 4329 GL---GHTNHVREPTLITVLQGKNIRQISAGRCHSAAWT 4364



 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 108/380 (28%), Positives = 168/380 (44%), Gaps = 31/380 (8%)

Query: 96  FLQSVEHSSDIVETSAGNMQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSF 154
           F +    +SD   T A    I TG   T ++S +  V+  GS+    L  G   TQ    
Sbjct: 340 FEEVCRMASDYSRTCASPDSIQTG--DTPIVSETCEVYVWGSNSSHQLVEG---TQEKIL 394

Query: 155 TRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTN------RPIFRPR 208
                PS +    + A +     +   G V  CG  S    G  D+N      +  F P 
Sbjct: 395 QPKLAPSFSDAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPH 454

Query: 209 LVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEV 268
              ++K V   + + G   T   T  G V + G   +G+LGHG++  +  PK I    + 
Sbjct: 455 --RSIKKVSSSKGSDG--HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQG 510

Query: 269 GSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRV 328
             VV ++AG  +  AVT +G +Y++G G    LGHG+ +     R I T  +   +V  V
Sbjct: 511 KVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNS----RNIPTLVKDISNVGEV 566

Query: 329 SAGDEHVVALDSSGY-VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKT 387
           S G  H +AL   G  V+++G G  G LGHGD      P+ + +L+     +VCA  + +
Sbjct: 567 SCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSS 626

Query: 388 FVLVDTGSVYGFG---WMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV 444
             L  TG VY +G    +G GS            LRP++++ L A  +  IS G  H + 
Sbjct: 627 LALTSTGQVYAWGCGACLGCGS-------SEATALRPKLVEELAATRIVDISIGDSHCLA 679

Query: 445 VTDRGRLFGFGDNERAQLGH 464
           ++    ++ +G+N   Q G 
Sbjct: 680 LSHDNEVYAWGNNSMGQCGQ 699



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 89/324 (27%), Positives = 151/324 (46%), Gaps = 13/324 (4%)

Query: 160  PSAAHVVQVSASENHAAFVLQS-GQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPC 218
            PS +   QV   +N   FV+Q+ G V  CG+ S    G  +++  +    ++ AL+G   
Sbjct: 4029 PSFSQAQQVICGQN-CTFVIQANGTVLACGEGSYGRLGQGNSDD-LHVLTVISALQGFVV 4086

Query: 219  KQVTAGLNFTGF---LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA 275
             Q+       G    LT  G V + G   +G+LGHG++  +  P+ I  L+    VVQ++
Sbjct: 4087 TQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQG-EEVVQMS 4145

Query: 276  AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHV 335
             G  +   VT +G +++FG+G    LG G   ++  P  +     +G  + +V+ G  H 
Sbjct: 4146 CGFKHSAVVTADGKMFTFGNGDYGRLGLGNTSNKKLPERVTAL--EGYQIGQVACGLNHT 4203

Query: 336  VALDSSG-YVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 394
            +A+ + G  V+ +G G  G LG G+   K+ P+ +  L      +V    + +  L   G
Sbjct: 4204 LAVSTDGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDG 4263

Query: 395  SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 454
             VY FG      +G P+ G +    RP+ +  L    +  ++ G  HT+ +T  G ++ +
Sbjct: 4264 HVYTFGQDRL--IGLPE-GRARNHNRPQQVPVLAGVVIEDVAVGAEHTLAITSTGDVYAW 4320

Query: 455  GDNERAQLGHDTLRGCLEPTEIFI 478
            G N   QLG        EPT I +
Sbjct: 4321 GSNSEGQLGLGHTNHVREPTLITV 4344



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 68/230 (29%), Positives = 106/230 (46%), Gaps = 11/230 (4%)

Query: 237  VHTCGSNTHGQLGH-GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 295
            V+  G+  HGQL   G  +  P     A         Q+  G +    +  NG V + G 
Sbjct: 4004 VYLWGAGRHGQLAEAGRNVMIP-----AGAPSFSQAQQVICGQNCTFVIQANGTVLACGE 4058

Query: 296  GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG-DEHVVALDSSGYVYTWGKGYCGA 354
            GS   LG G   D      I   +   +  +  S G D H +AL  SG V++WG G  G 
Sbjct: 4059 GSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGK 4118

Query: 355  LGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGV 414
            LGHG+   +  P  + +L+    VQ+    + + V+   G ++ FG   +G LG  +   
Sbjct: 4119 LGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTADGKMFTFGNGDYGRLGLGN--T 4176

Query: 415  SDKVLRPRILDSLRAHHVSQISTGLYHTVVV-TDRGRLFGFGDNERAQLG 463
            S+K L P  + +L  + + Q++ GL HT+ V TD   ++ FGD +  +LG
Sbjct: 4177 SNKKL-PERVTALEGYQIGQVACGLNHTLAVSTDGSMVWAFGDGDYGKLG 4225



 Score = 48.5 bits (114), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 28/100 (28%), Positives = 48/100 (48%), Gaps = 2/100 (2%)

Query: 125 LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQV 184
           L S   V++ G   C  LG G      +    +   +A  +V +S  ++H   +    +V
Sbjct: 629 LTSTGQVYAWGCGAC--LGCGSSEATALRPKLVEELAATRIVDISIGDSHCLALSHDNEV 686

Query: 185 FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           +  G+NS   CG  ++  PI +P+ V  L GV  +Q++AG
Sbjct: 687 YAWGNNSMGQCGQGNSTGPITKPKKVSGLDGVAIQQISAG 726



 Score = 47.8 bits (112), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 41/143 (28%), Positives = 66/143 (46%), Gaps = 9/143 (6%)

Query: 344  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 403
            VY WG G  G L    E  + +  P  +     A QV   +  TFV+   G+V   G   
Sbjct: 4004 VYLWGAGRHGQLA---EAGRNVMIPAGAPSFSQAQQVICGQNCTFVIQANGTVLACGEGS 4060

Query: 404  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLY---HTVVVTDRGRLFGFGDNERA 460
            +G LG   +G SD +    ++ +L+   V+Q+ T      H++ +T+ G +F +GD +  
Sbjct: 4061 YGRLG---QGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYG 4117

Query: 461  QLGHDTLRGCLEPTEIFIQEMEE 483
            +LGH        P +I   + EE
Sbjct: 4118 KLGHGNSDRQRRPRQIEALQGEE 4140


>gi|357439465|ref|XP_003590009.1| Serine/threonine protein kinase Nek9 [Medicago truncatula]
 gi|355479057|gb|AES60260.1| Serine/threonine protein kinase Nek9 [Medicago truncatula]
          Length = 1080

 Score =  126 bits (316), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 97/326 (29%), Positives = 154/326 (47%), Gaps = 23/326 (7%)

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
           +H A V + G++FT G++S    GH   ++   +PRLV++L       V  G   T  ++
Sbjct: 273 SHIALVTRQGEIFTWGEDSGGRLGH-GFDKDYGKPRLVDSLAITSVSFVACGEYHTCAVS 331

Query: 233 IRGHVHTCGSNTH--GQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 290
           I G ++T G  TH  G LGHG  +    PK +    E   VV IA G  +   +T NG +
Sbjct: 332 ISGDLYTWGDGTHNAGILGHGTDVSHSIPKRVTGPLEGHQVVSIACGAWHTALITSNGKL 391

Query: 291 YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL------------ 338
           ++FG G+   LGHG++     P+ +Q     G   V+V+ G  H  A+            
Sbjct: 392 FTFGDGTLGVLGHGDRESVAYPKELQLL--SGHKAVKVACGVWHTAAIIEVNDQSGSSSN 449

Query: 339 -DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVY 397
             SS  ++TWG G    LGH ++     P  +++L  +  +QV      T  L  +G V+
Sbjct: 450 TSSSKKLFTWGDGDQYRLGHANKETYLQPTCVAALADYNFLQVACGHSLTVALTASGHVF 509

Query: 398 GFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDN 457
             G   +G LG P    SD  +   + D L+   V +IS G +H  V+T R  L+ +G  
Sbjct: 510 TMGSKAYGQLGNP---TSDGKVPILVRDKLQGETVEEISCGTHHVAVLTSRSELYTWGRG 566

Query: 458 ERAQLGHDTLRGCLEPTEIFIQEMEE 483
              +LGH  +    + T I ++ ++E
Sbjct: 567 ANGRLGHGDIED--QKTPILVEALKE 590



 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 78/266 (29%), Positives = 125/266 (46%), Gaps = 29/266 (10%)

Query: 229 GFLTIRGHVHTCGSNTHGQLGHG--DTLDRPTPKSIAPLEE--VGSVVQIAAGPSYMLAV 284
           G + I G V   G+++ G LG      +D   PK   PLE   V  V  I  G S++  V
Sbjct: 223 GDVFIWGEVWAEGNSSDG-LGSQVPSKIDMLIPK---PLESDVVLDVNYIEPGVSHIALV 278

Query: 285 TGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           T  G ++++G  S   LGHG   D  +PR + +     +  V  + G+ H  A+  SG +
Sbjct: 279 TRQGEIFTWGEDSGGRLGHGFDKDYGKPRLVDSLAITSVSFV--ACGEYHTCAVSISGDL 336

Query: 345 YTWGKGY--CGALGHGDEIDKTLPEPLS-SLKSHLAVQVCARKRKTFVLVDTGSVYGFGW 401
           YTWG G    G LGHG ++  ++P+ ++  L+ H  V +      T ++   G ++ FG 
Sbjct: 337 YTWGDGTHNAGILGHGTDVSHSIPKRVTGPLEGHQVVSIACGAWHTALITSNGKLFTFGD 396

Query: 402 MGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTD-------------R 448
              G LG  DR   + V  P+ L  L  H   +++ G++HT  + +              
Sbjct: 397 GTLGVLGHGDR---ESVAYPKELQLLSGHKAVKVACGVWHTAAIIEVNDQSGSSSNTSSS 453

Query: 449 GRLFGFGDNERAQLGHDTLRGCLEPT 474
            +LF +GD ++ +LGH      L+PT
Sbjct: 454 KKLFTWGDGDQYRLGHANKETYLQPT 479



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 80/301 (26%), Positives = 137/301 (45%), Gaps = 16/301 (5%)

Query: 182 GQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCG 241
           G+V+  G++S        +   +  P+ +E+   +    +  G++    +T +G + T G
Sbjct: 229 GEVWAEGNSSDGLGSQVPSKIDMLIPKPLESDVVLDVNYIEPGVSHIALVTRQGEIFTWG 288

Query: 242 SNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC- 300
            ++ G+LGHG   D   P+ +  L  + SV  +A G  +  AV+ +G +Y++G G++   
Sbjct: 289 EDSGGRLGHGFDKDYGKPRLVDSL-AITSVSFVACGEYHTCAVSISGDLYTWGDGTHNAG 347

Query: 301 -LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGD 359
            LGHG       P+ + T   +G  VV ++ G  H   + S+G ++T+G G  G LGHGD
Sbjct: 348 ILGHGTDVSHSIPKRV-TGPLEGHQVVSIACGAWHTALITSNGKLFTFGDGTLGVLGHGD 406

Query: 360 EIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYG-----------FGWMGFGSLG 408
                 P+ L  L  H AV+V      T  +++     G           F W G G   
Sbjct: 407 RESVAYPKELQLLSGHKAVKVACGVWHTAAIIEVNDQSGSSSNTSSSKKLFTW-GDGDQY 465

Query: 409 FPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLR 468
                  +  L+P  + +L  ++  Q++ G   TV +T  G +F  G     QLG+ T  
Sbjct: 466 RLGHANKETYLQPTCVAALADYNFLQVACGHSLTVALTASGHVFTMGSKAYGQLGNPTSD 525

Query: 469 G 469
           G
Sbjct: 526 G 526



 Score = 90.1 bits (222), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 77/275 (28%), Positives = 128/275 (46%), Gaps = 22/275 (8%)

Query: 116 ITTGRYHTLLISNSS---VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAH-VVQVSAS 171
           +  G YHT  +S S     +  G+   G+LGHG + +  +   R+  P   H VV ++  
Sbjct: 320 VACGEYHTCAVSISGDLYTWGDGTHNAGILGHGTDVSHSIP-KRVTGPLEGHQVVSIACG 378

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
             H A +  +G++FT GD +    GH D    +  P+ ++ L G    +V  G+  T  +
Sbjct: 379 AWHTALITSNGKLFTFGDGTLGVLGHGD-RESVAYPKELQLLSGHKAVKVACGVWHTAAI 437

Query: 232 -------------TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGP 278
                        +    + T G     +LGH +      P  +A L +  + +Q+A G 
Sbjct: 438 IEVNDQSGSSSNTSSSKKLFTWGDGDQYRLGHANKETYLQPTCVAALADY-NFLQVACGH 496

Query: 279 SYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
           S  +A+T +G V++ GS +   LG+     ++ P  ++  + +G  V  +S G  HV  L
Sbjct: 497 SLTVALTASGHVFTMGSKAYGQLGNPTSDGKV-PILVRD-KLQGETVEEISCGTHHVAVL 554

Query: 339 DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
            S   +YTWG+G  G LGHGD  D+  P  + +LK
Sbjct: 555 TSRSELYTWGRGANGRLGHGDIEDQKTPILVEALK 589



 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 69/233 (29%), Positives = 111/233 (47%), Gaps = 21/233 (9%)

Query: 114 MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSAS 171
           + I  G +HT LI SN  +F+ G    GVLGHG    + V++ + +   S    V+V+  
Sbjct: 373 VSIACGAWHTALITSNGKLFTFGDGTLGVLGHG--DRESVAYPKELQLLSGHKAVKVACG 430

Query: 172 ENHAAFVLQ-------------SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPC 218
             H A +++             S ++FT GD   +  GH +      +P  V AL     
Sbjct: 431 VWHTAAIIEVNDQSGSSSNTSSSKKLFTWGDGDQYRLGHAN-KETYLQPTCVAALADYNF 489

Query: 219 KQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGP 278
            QV  G + T  LT  GHV T GS  +GQLG+  T D   P  +    +  +V +I+ G 
Sbjct: 490 LQVACGHSLTVALTASGHVFTMGSKAYGQLGN-PTSDGKVPILVRDKLQGETVEEISCGT 548

Query: 279 SYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG 331
            ++  +T    +Y++G G+N  LGHG+  D+  P  ++  + +  HV  ++ G
Sbjct: 549 HHVAVLTSRSELYTWGRGANGRLGHGDIEDQKTPILVEALKER--HVKNIACG 599


>gi|326923408|ref|XP_003207928.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
           2 [Meleagris gallopavo]
          Length = 1056

 Score =  126 bits (316), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 98/296 (33%), Positives = 139/296 (46%), Gaps = 12/296 (4%)

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
           H  FVL  G V+TCG N     GH    +   RP  V AL       V+ G   T  L  
Sbjct: 45  HTVFVLDDGTVYTCGCNDLGQLGHEKARK---RPEHVGALDAQNIVAVSCGEAHTLALND 101

Query: 234 RGHVHTCGSNTHGQLGHGDTLD-RPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
           +G V+  G  T GQLG   T +    P++I  L E+  +VQ+A G  + LA++    V+S
Sbjct: 102 KGQVYAWGLATDGQLGLPGTEECIRVPRNIKSLSEI-QIVQVACGYYHSLALSKGSEVFS 160

Query: 293 FGSGSNFCLGHG-EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 351
           +G      LG G E   +  P  I++    GI   +++AG  H   L  SG ++ WG+  
Sbjct: 161 WGQNKYGQLGLGYEYKKQNSPHVIKSLL--GIPFAQIAAGGAHSFVLTLSGAIFGWGRNK 218

Query: 352 CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 411
            G LG  D+ D+ +P  L SL++   V +C  +  T  L   G V+ FG  G+G LG   
Sbjct: 219 FGQLGLNDDNDRYVPTLLKSLRTQKVVHICCGEDHTAALTKEGGVFTFGAGGYGQLG--- 275

Query: 412 RGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV-VTDRGRLFGFGDNERAQLGHDT 466
              +   + PR +  L    V+QI+ G  HT   V   GR++ FG     QLG  T
Sbjct: 276 HNSTSHEINPRKVFELMGSLVTQITCGRQHTTAFVPSSGRIYSFGLGGNGQLGTGT 331



 Score =  122 bits (305), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 89/276 (32%), Positives = 137/276 (49%), Gaps = 10/276 (3%)

Query: 204 IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 263
           +  PR  +       + V  GL  T F+   G V+TCG N  GQLGH     R  P+ + 
Sbjct: 22  VLEPRKSDFFLNKRIRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKA--RKRPEHVG 79

Query: 264 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLG-HGEQHDELQPRAIQTFRRKG 322
            L+   ++V ++ G ++ LA+   G VY++G  ++  LG  G +     PR I++     
Sbjct: 80  ALD-AQNIVAVSCGEAHTLALNDKGQVYAWGLATDGQLGLPGTEECIRVPRNIKSLSE-- 136

Query: 323 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK-TLPEPLSSLKSHLAVQVC 381
           I +V+V+ G  H +AL     V++WG+   G LG G E  K   P  + SL      Q+ 
Sbjct: 137 IQIVQVACGYYHSLALSKGSEVFSWGQNKYGQLGLGYEYKKQNSPHVIKSLLGIPFAQIA 196

Query: 382 ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYH 441
           A    +FVL  +G+++G+G   FG LG  D   +D+ + P +L SLR   V  I  G  H
Sbjct: 197 AGGAHSFVLTLSGAIFGWGRNKFGQLGLNDD--NDRYV-PTLLKSLRTQKVVHICCGEDH 253

Query: 442 TVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF 477
           T  +T  G +F FG     QLGH++    + P ++F
Sbjct: 254 TAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVF 289



 Score =  105 bits (263), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 82/291 (28%), Positives = 135/291 (46%), Gaps = 8/291 (2%)

Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 179
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V VS  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKARKRPEHVGALD---AQNIVAVSCGEAHTLALN 100

Query: 180 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 239
             GQV+  G  +    G   T   I  PR +++L  +   QV  G   +  L+    V +
Sbjct: 101 DKGQVYAWGLATDGQLGLPGTEECIRVPRNIKSLSEIQIVQVACGYYHSLALSKGSEVFS 160

Query: 240 CGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
            G N +GQLG G +   + +P  I  L  +    QIAAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKYGQLGLGYEYKKQNSPHVIKSLLGI-PFAQIAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 299 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 358
             LG  + +D   P  +++ R +   VV +  G++H  AL   G V+T+G G  G LGH 
Sbjct: 220 GQLGLNDDNDRYVPTLLKSLRTQ--KVVHICCGEDHTAALTKEGGVFTFGAGGYGQLGHN 277

Query: 359 DEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLG 408
               +  P  +  L   L  Q+ C R+  T  +  +G +Y FG  G G LG
Sbjct: 278 STSHEINPRKVFELMGSLVTQITCGRQHTTAFVPSSGRIYSFGLGGNGQLG 328



 Score =  104 bits (260), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 79/254 (31%), Positives = 124/254 (48%), Gaps = 7/254 (2%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSASEN 173
           ++ G  HTL +++   V++ G +  G LG  P T +C+   R I   S   +VQV+    
Sbjct: 89  VSCGEAHTLALNDKGQVYAWGLATDGQLGL-PGTEECIRVPRNIKSLSEIQIVQVACGYY 147

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
           H+  + +  +VF+ G N     G     +    P ++++L G+P  Q+ AG   +  LT+
Sbjct: 148 HSLALSKGSEVFSWGQNKYGQLGLGYEYKKQNSPHVIKSLLGIPFAQIAAGGAHSFVLTL 207

Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
            G +   G N  GQLG  D  DR  P  +  L     VV I  G  +  A+T  G V++F
Sbjct: 208 SGAIFGWGRNKFGQLGLNDDNDRYVPTLLKSLR-TQKVVHICCGEDHTAALTKEGGVFTF 266

Query: 294 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA-LDSSGYVYTWGKGYC 352
           G+G    LGH     E+ PR +  F   G  V +++ G +H  A + SSG +Y++G G  
Sbjct: 267 GAGGYGQLGHNSTSHEINPRKV--FELMGSLVTQITCGRQHTTAFVPSSGRIYSFGLGGN 324

Query: 353 GALGHGDEIDKTLP 366
           G LG G   ++  P
Sbjct: 325 GQLGTGTTSNRKSP 338



 Score = 77.8 bits (190), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 67/206 (32%), Positives = 97/206 (47%), Gaps = 6/206 (2%)

Query: 114 MQITTGRYHTLLISN-SSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +Q+  G YH+L +S  S VFS G +  G LG G E  +  S   I         Q++A  
Sbjct: 140 VQVACGYYHSLALSKGSEVFSWGQNKYGQLGLGYEYKKQNSPHVIKSLLGIPFAQIAAGG 199

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            H+  +  SG +F  G N     G  D N   + P L+++L+      +  G + T  LT
Sbjct: 200 AHSFVLTLSGAIFGWGRNKFGQLGLNDDNDR-YVPTLLKSLRTQKVVHICCGEDHTAALT 258

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVV 290
             G V T G+  +GQLGH  T     P+ +   E +GS+V QI  G  +  A V  +G +
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSLVTQITCGRQHTTAFVPSSGRI 316

Query: 291 YSFGSGSNFCLGHGEQHDELQPRAIQ 316
           YSFG G N  LG G   +   P  ++
Sbjct: 317 YSFGLGGNGQLGTGTTSNRKSPFTVK 342


>gi|261405028|ref|YP_003241269.1| hypothetical protein GYMC10_1173 [Paenibacillus sp. Y412MC10]
 gi|261281491|gb|ACX63462.1| Listeria/Bacterioides repeat protein [Paenibacillus sp. Y412MC10]
          Length = 1280

 Score =  126 bits (316), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 110/377 (29%), Positives = 173/377 (45%), Gaps = 25/377 (6%)

Query: 115 QITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
           +I  G YHT  L+S+  V+S G    G LG G   T+       N     HV+ + +   
Sbjct: 37  KIVAGYYHTASLVSSGEVYSWGYGDRGQLGDGTWNTRTTPVMAKNL---NHVIDIHSGVR 93

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF-LT 232
            +  + Q G V+T G N +   G   T   +  P  V  L G+  K ++ GL + G  L+
Sbjct: 94  SSMALRQDGTVWTWGANENGQLG-IGTITNVNAPAQVPGLSGI--KAISGGLAYHGMALS 150

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
             G V T G N +G+LG+G T+ + +P  +A L +V     IAAG  Y LA+  +G V++
Sbjct: 151 ENGTVWTWGKNDNGELGNGTTIQQNSPVLVAGLSDV---TAIAAGGYYSLALKSDGTVWA 207

Query: 293 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 352
           +G   +  LG G   D   P  +         V+ ++AG  H +A+   G V+ WG    
Sbjct: 208 WGVNGSGELGDGTTTDRHVPVQVAGL----TDVMAIAAGGSHSLAIKQDGTVWAWGNNTY 263

Query: 353 GALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDR 412
           G LG G    +T P  + +L+ H+ V V      +  +   G+V+ +G      LG    
Sbjct: 264 GTLGDGTRTHRTRPVQVRNLQ-HI-VAVAGGGYHSLAVDRAGNVWSWGDNSQQQLGLNSN 321

Query: 413 GVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG---HDTLRG 469
             S   L P  +  +   HV +IS G +H+V +   G ++G+G N   Q+G   ++  RG
Sbjct: 322 ASS---LIPVPVPGIE--HVREISAGGFHSVAMKKDGTVWGWGYNSGGQIGDGTYNNTRG 376

Query: 470 CLEPTEIFIQEMEEDTG 486
               T+  +     DTG
Sbjct: 377 IPTLTKAVLDTTSPDTG 393


>gi|118092565|ref|XP_001231234.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 [Gallus
           gallus]
          Length = 1056

 Score =  126 bits (316), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 98/296 (33%), Positives = 139/296 (46%), Gaps = 12/296 (4%)

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
           H  FVL  G V+TCG N     GH    +   RP  V AL       V+ G   T  L  
Sbjct: 45  HTVFVLDDGTVYTCGCNDLGQLGHEKARK---RPEHVGALDAQNIVAVSCGEAHTLALND 101

Query: 234 RGHVHTCGSNTHGQLGHGDTLD-RPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
           +G V+  G  T GQLG   T +    P++I  L E+  +VQ+A G  + LA++    V+S
Sbjct: 102 KGQVYAWGLATDGQLGLPGTEECIRVPRNIKSLSEI-QIVQVACGYYHSLALSKGSEVFS 160

Query: 293 FGSGSNFCLGHG-EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 351
           +G      LG G E   +  P  I++    GI   +++AG  H   L  SG ++ WG+  
Sbjct: 161 WGQNKYGQLGLGYEYKKQNSPHVIKSLL--GIPFAQIAAGGAHSFVLTLSGAIFGWGRNK 218

Query: 352 CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 411
            G LG  D+ D+ +P  L SL++   V +C  +  T  L   G V+ FG  G+G LG   
Sbjct: 219 FGQLGLNDDNDRYVPTLLKSLRTQKVVHICCGEDHTAALTKEGGVFTFGAGGYGQLG--- 275

Query: 412 RGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV-VTDRGRLFGFGDNERAQLGHDT 466
              +   + PR +  L    V+QI+ G  HT   V   GR++ FG     QLG  T
Sbjct: 276 HNSTSHEINPRKVFELMGSLVTQITCGRQHTTAFVPSSGRIYSFGLGGNGQLGTGT 331



 Score =  122 bits (305), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 89/276 (32%), Positives = 137/276 (49%), Gaps = 10/276 (3%)

Query: 204 IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 263
           +  PR  +       + V  GL  T F+   G V+TCG N  GQLGH     R  P+ + 
Sbjct: 22  VLEPRKSDFFLNKRIRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKA--RKRPEHVG 79

Query: 264 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLG-HGEQHDELQPRAIQTFRRKG 322
            L+   ++V ++ G ++ LA+   G VY++G  ++  LG  G +     PR I++     
Sbjct: 80  ALD-AQNIVAVSCGEAHTLALNDKGQVYAWGLATDGQLGLPGTEECIRVPRNIKSLSE-- 136

Query: 323 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK-TLPEPLSSLKSHLAVQVC 381
           I +V+V+ G  H +AL     V++WG+   G LG G E  K   P  + SL      Q+ 
Sbjct: 137 IQIVQVACGYYHSLALSKGSEVFSWGQNKYGQLGLGYEYKKQNSPHVIKSLLGIPFAQIA 196

Query: 382 ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYH 441
           A    +FVL  +G+++G+G   FG LG  D   +D+ + P +L SLR   V  I  G  H
Sbjct: 197 AGGAHSFVLTLSGAIFGWGRNKFGQLGLNDD--NDRYV-PTLLKSLRTQKVVHICCGEDH 253

Query: 442 TVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF 477
           T  +T  G +F FG     QLGH++    + P ++F
Sbjct: 254 TAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVF 289



 Score =  105 bits (263), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 82/291 (28%), Positives = 135/291 (46%), Gaps = 8/291 (2%)

Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 179
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V VS  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKARKRPEHVGALD---AQNIVAVSCGEAHTLALN 100

Query: 180 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 239
             GQV+  G  +    G   T   I  PR +++L  +   QV  G   +  L+    V +
Sbjct: 101 DKGQVYAWGLATDGQLGLPGTEECIRVPRNIKSLSEIQIVQVACGYYHSLALSKGSEVFS 160

Query: 240 CGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
            G N +GQLG G +   + +P  I  L  +    QIAAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKYGQLGLGYEYKKQNSPHVIKSLLGI-PFAQIAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 299 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 358
             LG  + +D   P  +++ R +   VV +  G++H  AL   G V+T+G G  G LGH 
Sbjct: 220 GQLGLNDDNDRYVPTLLKSLRTQ--KVVHICCGEDHTAALTKEGGVFTFGAGGYGQLGHN 277

Query: 359 DEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLG 408
               +  P  +  L   L  Q+ C R+  T  +  +G +Y FG  G G LG
Sbjct: 278 STSHEINPRKVFELMGSLVTQITCGRQHTTAFVPSSGRIYSFGLGGNGQLG 328



 Score =  104 bits (260), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 79/254 (31%), Positives = 124/254 (48%), Gaps = 7/254 (2%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSASEN 173
           ++ G  HTL +++   V++ G +  G LG  P T +C+   R I   S   +VQV+    
Sbjct: 89  VSCGEAHTLALNDKGQVYAWGLATDGQLGL-PGTEECIRVPRNIKSLSEIQIVQVACGYY 147

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
           H+  + +  +VF+ G N     G     +    P ++++L G+P  Q+ AG   +  LT+
Sbjct: 148 HSLALSKGSEVFSWGQNKYGQLGLGYEYKKQNSPHVIKSLLGIPFAQIAAGGAHSFVLTL 207

Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
            G +   G N  GQLG  D  DR  P  +  L     VV I  G  +  A+T  G V++F
Sbjct: 208 SGAIFGWGRNKFGQLGLNDDNDRYVPTLLKSLR-TQKVVHICCGEDHTAALTKEGGVFTF 266

Query: 294 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA-LDSSGYVYTWGKGYC 352
           G+G    LGH     E+ PR +  F   G  V +++ G +H  A + SSG +Y++G G  
Sbjct: 267 GAGGYGQLGHNSTSHEINPRKV--FELMGSLVTQITCGRQHTTAFVPSSGRIYSFGLGGN 324

Query: 353 GALGHGDEIDKTLP 366
           G LG G   ++  P
Sbjct: 325 GQLGTGTTSNRKSP 338



 Score = 77.8 bits (190), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 67/206 (32%), Positives = 97/206 (47%), Gaps = 6/206 (2%)

Query: 114 MQITTGRYHTLLISN-SSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +Q+  G YH+L +S  S VFS G +  G LG G E  +  S   I         Q++A  
Sbjct: 140 VQVACGYYHSLALSKGSEVFSWGQNKYGQLGLGYEYKKQNSPHVIKSLLGIPFAQIAAGG 199

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            H+  +  SG +F  G N     G  D N   + P L+++L+      +  G + T  LT
Sbjct: 200 AHSFVLTLSGAIFGWGRNKFGQLGLNDDNDR-YVPTLLKSLRTQKVVHICCGEDHTAALT 258

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVV 290
             G V T G+  +GQLGH  T     P+ +   E +GS+V QI  G  +  A V  +G +
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSLVTQITCGRQHTTAFVPSSGRI 316

Query: 291 YSFGSGSNFCLGHGEQHDELQPRAIQ 316
           YSFG G N  LG G   +   P  ++
Sbjct: 317 YSFGLGGNGQLGTGTTSNRKSPFTVK 342


>gi|449442447|ref|XP_004138993.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein
           LOC101222790 [Cucumis sativus]
          Length = 982

 Score =  126 bits (316), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 90/308 (29%), Positives = 138/308 (44%), Gaps = 23/308 (7%)

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
           HA  V + G++F+ G+ S    GH      +  P++++ L G   + V  G   T  +T+
Sbjct: 301 HAVLVTRQGEIFSWGEESGGRLGH-GVEADVSHPKIIDTLSGTNVELVACGEYHTCAVTL 359

Query: 234 RGHVHTCGSNTH--GQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
            G ++T G  TH  G LGHG  +    P+ +    E   V  I+ G  +   VT  G ++
Sbjct: 360 SGDLYTWGDGTHNYGLLGHGSEVSHWIPQKVGGQMEGIRVSYISCGAWHTAVVTSAGQLF 419

Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL------------- 338
           +FG GS   LGHG+      PR ++T R  G+   +V+ G  H  A              
Sbjct: 420 TFGDGSFGALGHGDHITSNFPREVETLR--GLRTTKVACGVWHTAAAVEAINELSDSGTS 477

Query: 339 --DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSV 396
              SS  +YTWG G  G LGHGD   + +PE +++L      QV      T  L   G V
Sbjct: 478 ASPSSRKLYTWGDGDKGRLGHGDNEPRLVPECVAALIEERICQVACGNDLTVALTTAGRV 537

Query: 397 YGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGD 456
           Y  G   +G LG      ++  L   +   +    V +++ G YH  V+T +  ++ +G 
Sbjct: 538 YTMGSTAYGQLG---SATANGKLPTCVEGEIANSFVEEVACGSYHVAVLTSKNEVYTWGK 594

Query: 457 NERAQLGH 464
               QLGH
Sbjct: 595 GLNGQLGH 602



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 97/310 (31%), Positives = 135/310 (43%), Gaps = 23/310 (7%)

Query: 100 VEHSSDIVETSAGNMQ-ITTGRYHTLLISNSS---VFSCGSSLCGVLGHGPETTQCVSFT 155
           V H   I   S  N++ +  G YHT  ++ S     +  G+   G+LGHG E +  +   
Sbjct: 330 VSHPKIIDTLSGTNVELVACGEYHTCAVTLSGDLYTWGDGTHNYGLLGHGSEVSHWIPQK 389

Query: 156 RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 215
                    V  +S    H A V  +GQ+FT GD S    GH D     F PR VE L+G
Sbjct: 390 VGGQMEGIRVSYISCGAWHTAVVTSAGQLFTFGDGSFGALGHGDHITSNF-PREVETLRG 448

Query: 216 VPCKQVTAGLNFTGF-------LTIRG--------HVHTCGSNTHGQLGHGDTLDRPTPK 260
           +   +V  G+  T         L+  G         ++T G    G+LGHGD   R  P+
Sbjct: 449 LRTTKVACGVWHTAAAVEAINELSDSGTSASPSSRKLYTWGDGDKGRLGHGDNEPRLVPE 508

Query: 261 SIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRR 320
            +A L E   + Q+A G    +A+T  G VY+ GS +   LG    + +L P  ++    
Sbjct: 509 CVAALIE-ERICQVACGNDLTVALTTAGRVYTMGSTAYGQLGSATANGKL-PTCVEGEIA 566

Query: 321 KGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQV 380
               V  V+ G  HV  L S   VYTWGKG  G LGHGD   +  P  +  LK      V
Sbjct: 567 NSF-VEEVACGSYHVAVLTSKNEVYTWGKGLNGQLGHGDNNHRNTPTIVDVLKDKQVKNV 625

Query: 381 CARKRKTFVL 390
               + T V+
Sbjct: 626 ACGSKFTVVI 635



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 84/298 (28%), Positives = 136/298 (45%), Gaps = 28/298 (9%)

Query: 207 PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 266
           P+ +E+   +    +  G      +T +G + + G  + G+LGHG   D   PK I  L 
Sbjct: 281 PKALESTVVLDVHGIACGGRHAVLVTRQGEIFSWGEESGGRLGHGVEADVSHPKIIDTLS 340

Query: 267 EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS-NF-CLGHGEQHDELQPRAIQTFRRKGIH 324
              +V  +A G  +  AVT +G +Y++G G+ N+  LGHG +     P+ +   + +GI 
Sbjct: 341 GT-NVELVACGEYHTCAVTLSGDLYTWGDGTHNYGLLGHGSEVSHWIPQKVGG-QMEGIR 398

Query: 325 VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVC--- 381
           V  +S G  H   + S+G ++T+G G  GALGHGD I    P  + +L+     +V    
Sbjct: 399 VSYISCGAWHTAVVTSAGQLFTFGDGSFGALGHGDHITSNFPREVETLRGLRTTKVACGV 458

Query: 382 ----ARKRKTFVLVDTGS--------VYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRA 429
               A       L D+G+        +Y +G    G LG  D   ++  L P  + +L  
Sbjct: 459 WHTAAAVEAINELSDSGTSASPSSRKLYTWGDGDKGRLGHGD---NEPRLVPECVAALIE 515

Query: 430 HHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCL------EPTEIFIQEM 481
             + Q++ G   TV +T  GR++  G     QLG  T  G L      E    F++E+
Sbjct: 516 ERICQVACGNDLTVALTTAGRVYTMGSTAYGQLGSATANGKLPTCVEGEIANSFVEEV 573



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 91/345 (26%), Positives = 144/345 (41%), Gaps = 26/345 (7%)

Query: 119 GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSASENHAAF 177
           GR+  L+     +FS G    G LGHG E    VS  + I+  S  +V  V+  E H   
Sbjct: 299 GRHAVLVTRQGEIFSWGEESGGRLGHGVEAD--VSHPKIIDTLSGTNVELVACGEYHTCA 356

Query: 178 VLQSGQVFTCGDNSSF--CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRG 235
           V  SG ++T GD +      GH          ++   ++G+    ++ G   T  +T  G
Sbjct: 357 VTLSGDLYTWGDGTHNYGLLGHGSEVSHWIPQKVGGQMEGIRVSYISCGAWHTAVVTSAG 416

Query: 236 HVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS------VVQIAAGPSYMLAVTGNGV 289
            + T G  + G LGHGD +    P+ +  L  + +      V   AA    +  ++ +G 
Sbjct: 417 QLFTFGDGSFGALGHGDHITSNFPREVETLRGLRTTKVACGVWHTAAAVEAINELSDSGT 476

Query: 290 --------VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 341
                   +Y++G G    LGHG+    L P  +     +   + +V+ G++  VAL ++
Sbjct: 477 SASPSSRKLYTWGDGDKGRLGHGDNEPRLVPECVAALIEE--RICQVACGNDLTVALTTA 534

Query: 342 GYVYTWGKGYCGALGHGDEIDKTLPEPLS-SLKSHLAVQVCARKRKTFVLVDTGSVYGFG 400
           G VYT G    G LG      K LP  +   + +    +V        VL     VY +G
Sbjct: 535 GRVYTMGSTAYGQLGSATANGK-LPTCVEGEIANSFVEEVACGSYHVAVLTSKNEVYTWG 593

Query: 401 WMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVV 445
               G LG  D    +    P I+D L+   V  ++ G   TVV+
Sbjct: 594 KGLNGQLGHGDNNHRNT---PTIVDVLKDKQVKNVACGSKFTVVI 635


>gi|224062918|ref|XP_002300931.1| predicted protein [Populus trichocarpa]
 gi|222842657|gb|EEE80204.1| predicted protein [Populus trichocarpa]
          Length = 1114

 Score =  126 bits (316), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 93/305 (30%), Positives = 145/305 (47%), Gaps = 21/305 (6%)

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
           HAA V + G+VFT G+ S    GH    + + +PRLVE+L       +  G   T  +T+
Sbjct: 291 HAAMVTRQGEVFTWGEESGGRLGH-GVGKDVIQPRLVESLAMTTVDFIACGEFHTCAVTM 349

Query: 234 RGHVHTCGSNTH--GQLGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSYMLAVTGNGVV 290
            G ++T G   H  G LGHG  +    PK I+ PLE +  V  +  GP +   VT  G +
Sbjct: 350 AGEIYTWGDGMHYAGLLGHGTDISHWIPKRISGPLEGL-QVASVTCGPWHTALVTSTGQL 408

Query: 291 YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL-----------D 339
           ++FG G+   LGHG + +   P+ +++    G+  + V+ G  H  A+            
Sbjct: 409 FTFGDGTFGVLGHGNRENIAYPKEVESL--AGLRTIAVACGVWHTAAVVEVIVTQSSSSV 466

Query: 340 SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGF 399
           SSG ++TWG G    LGHGD+  +  P  + +L      ++      T  L  +G V+  
Sbjct: 467 SSGKLFTWGDGDKNRLGHGDKEPRLKPTCVPALIDFNFHKIACGHSLTVGLTTSGHVFTM 526

Query: 400 GWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNER 459
           G   +G LG P    +D  +   + D L    V +I+ G YH  V+T R  ++ +G    
Sbjct: 527 GSTVYGQLGNP---YADGKVPCLVEDKLSGESVEEIACGAYHVAVLTSRNEVYTWGKGAN 583

Query: 460 AQLGH 464
            +LGH
Sbjct: 584 GRLGH 588



 Score = 95.9 bits (237), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 71/227 (31%), Positives = 111/227 (48%), Gaps = 21/227 (9%)

Query: 264 PLEE--VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRK 321
           PLE   V  V  IA G  +   VT  G V+++G  S   LGHG   D +QPR +++    
Sbjct: 273 PLESNVVLDVHHIACGFRHAAMVTRQGEVFTWGEESGGRLGHGVGKDVIQPRLVESLAMT 332

Query: 322 GIHVVRVSAGDEHVVALDSSGYVYTWGKG--YCGALGHGDEIDKTLPEPLSSLKSHLAV- 378
            +  +  + G+ H  A+  +G +YTWG G  Y G LGHG +I   +P+ +S     L V 
Sbjct: 333 TVDFI--ACGEFHTCAVTMAGEIYTWGDGMHYAGLLGHGTDISHWIPKRISGPLEGLQVA 390

Query: 379 QVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTG 438
            V      T ++  TG ++ FG   FG LG  +R   + +  P+ ++SL       ++ G
Sbjct: 391 SVTCGPWHTALVTSTGQLFTFGDGTFGVLGHGNR---ENIAYPKEVESLAGLRTIAVACG 447

Query: 439 LYHTVVVTD-----------RGRLFGFGDNERAQLGHDTLRGCLEPT 474
           ++HT  V +            G+LF +GD ++ +LGH      L+PT
Sbjct: 448 VWHTAAVVEVIVTQSSSSVSSGKLFTWGDGDKNRLGHGDKEPRLKPT 494



 Score = 94.7 bits (234), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 85/282 (30%), Positives = 129/282 (45%), Gaps = 21/282 (7%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSL--CGVLGHGPETTQCVSFTRINFP-SAAHVVQVSAS 171
           I  G +HT  ++ +  +++ G  +   G+LGHG + +  +   RI+ P     V  V+  
Sbjct: 337 IACGEFHTCAVTMAGEIYTWGDGMHYAGLLGHGTDISHWIP-KRISGPLEGLQVASVTCG 395

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
             H A V  +GQ+FT GD +    GH +    I  P+ VE+L G+    V  G+  T  +
Sbjct: 396 PWHTALVTSTGQLFTFGDGTFGVLGHGNREN-IAYPKEVESLAGLRTIAVACGVWHTAAV 454

Query: 232 T-----------IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 280
                         G + T G     +LGHGD   R  P  +  L +  +  +IA G S 
Sbjct: 455 VEVIVTQSSSSVSSGKLFTWGDGDKNRLGHGDKEPRLKPTCVPALIDF-NFHKIACGHSL 513

Query: 281 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 340
            + +T +G V++ GS     LG+    D   P  ++  +  G  V  ++ G  HV  L S
Sbjct: 514 TVGLTTSGHVFTMGSTVYGQLGN-PYADGKVPCLVED-KLSGESVEEIACGAYHVAVLTS 571

Query: 341 SGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK-SHLAVQVC 381
              VYTWGKG  G LGHGD  D+  P  + +LK  H+    C
Sbjct: 572 RNEVYTWGKGANGRLGHGDGEDRKTPTLVEALKDKHVKYIAC 613



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 85/346 (24%), Positives = 142/346 (41%), Gaps = 34/346 (9%)

Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHVVQVSASE 172
           R+  ++     VF+ G    G LGHG       P   + ++ T ++F        ++  E
Sbjct: 290 RHAAMVTRQGEVFTWGEESGGRLGHGVGKDVIQPRLVESLAMTTVDF--------IACGE 341

Query: 173 NHAAFVLQSGQVFTCGDNSSFC--CGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
            H   V  +G+++T GD   +    GH          R+   L+G+    VT G   T  
Sbjct: 342 FHTCAVTMAGEIYTWGDGMHYAGLLGHGTDISHWIPKRISGPLEGLQVASVTCGPWHTAL 401

Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT----- 285
           +T  G + T G  T G LGHG+  +   PK +  L  + ++  +A G  +  AV      
Sbjct: 402 VTSTGQLFTFGDGTFGVLGHGNRENIAYPKEVESLAGLRTIA-VACGVWHTAAVVEVIVT 460

Query: 286 ------GNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 339
                  +G ++++G G    LGHG++   L+P  +        H  +++ G    V L 
Sbjct: 461 QSSSSVSSGKLFTWGDGDKNRLGHGDKEPRLKPTCVPALIDFNFH--KIACGHSLTVGLT 518

Query: 340 SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGF 399
           +SG+V+T G    G LG+     K        L      ++        VL     VY +
Sbjct: 519 TSGHVFTMGSTVYGQLGNPYADGKVPCLVEDKLSGESVEEIACGAYHVAVLTSRNEVYTW 578

Query: 400 GWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVV 445
           G    G LG  D G   K   P ++++L+  HV  I+ G  ++  +
Sbjct: 579 GKGANGRLGHGD-GEDRKT--PTLVEALKDKHVKYIACGANYSAAI 621



 Score = 85.1 bits (209), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 69/236 (29%), Positives = 112/236 (47%), Gaps = 19/236 (8%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSASEN 173
           +T G +HT L++++  +F+ G    GVLGHG    + +++ + +   +    + V+    
Sbjct: 392 VTCGPWHTALVTSTGQLFTFGDGTFGVLGHG--NRENIAYPKEVESLAGLRTIAVACGVW 449

Query: 174 HAAFVLQ-----------SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 222
           H A V++           SG++FT GD      GH D   P  +P  V AL      ++ 
Sbjct: 450 HTAAVVEVIVTQSSSSVSSGKLFTWGDGDKNRLGHGD-KEPRLKPTCVPALIDFNFHKIA 508

Query: 223 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 282
            G + T  LT  GHV T GS  +GQLG+    D   P  +       SV +IA G  ++ 
Sbjct: 509 CGHSLTVGLTTSGHVFTMGSTVYGQLGN-PYADGKVPCLVEDKLSGESVEEIACGAYHVA 567

Query: 283 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
            +T    VY++G G+N  LGHG+  D   P  ++  + K  HV  ++ G  +  A+
Sbjct: 568 VLTSRNEVYTWGKGANGRLGHGDGEDRKTPTLVEALKDK--HVKYIACGANYSAAI 621



 Score = 85.1 bits (209), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 80/300 (26%), Positives = 134/300 (44%), Gaps = 21/300 (7%)

Query: 200 TNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTP 259
           T   +  PR +E+   +    +  G      +T +G V T G  + G+LGHG   D   P
Sbjct: 264 TRADVLLPRPLESNVVLDVHHIACGFRHAAMVTRQGEVFTWGEESGGRLGHGVGKDVIQP 323

Query: 260 KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC--LGHGEQHDELQPRAIQT 317
           + +  L  + +V  IA G  +  AVT  G +Y++G G ++   LGHG       P+ I +
Sbjct: 324 RLVESL-AMTTVDFIACGEFHTCAVTMAGEIYTWGDGMHYAGLLGHGTDISHWIPKRI-S 381

Query: 318 FRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLA 377
              +G+ V  V+ G  H   + S+G ++T+G G  G LGHG+  +   P+ + SL     
Sbjct: 382 GPLEGLQVASVTCGPWHTALVTSTGQLFTFGDGTFGVLGHGNRENIAYPKEVESLAGLRT 441

Query: 378 VQVCARKRKTFVLVDT-----------GSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDS 426
           + V      T  +V+            G ++ +G      LG  D+   +  L+P  + +
Sbjct: 442 IAVACGVWHTAAVVEVIVTQSSSSVSSGKLFTWGDGDKNRLGHGDK---EPRLKPTCVPA 498

Query: 427 LRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG---CLEPTEIFIQEMEE 483
           L   +  +I+ G   TV +T  G +F  G     QLG+    G   CL   ++  + +EE
Sbjct: 499 LIDFNFHKIACGHSLTVGLTTSGHVFTMGSTVYGQLGNPYADGKVPCLVEDKLSGESVEE 558



 Score = 49.3 bits (116), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 39/128 (30%), Positives = 59/128 (46%), Gaps = 13/128 (10%)

Query: 339 DSSGYVYTWGKGYC-GALGHGDEIDKT---------LPEPLSSLKSHLAVQVCARKRKTF 388
           D+ G VY WG+  C  A+  G + + T         LP PL S        +    R   
Sbjct: 234 DALGDVYVWGEIICDNAVKVGADKNATYLSTRADVLLPRPLESNVVLDVHHIACGFRHAA 293

Query: 389 VLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDR 448
           ++   G V+ +G    G LG    GV   V++PR+++SL    V  I+ G +HT  VT  
Sbjct: 294 MVTRQGEVFTWGEESGGRLGH---GVGKDVIQPRLVESLAMTTVDFIACGEFHTCAVTMA 350

Query: 449 GRLFGFGD 456
           G ++ +GD
Sbjct: 351 GEIYTWGD 358


>gi|344275071|ref|XP_003409337.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
           1 [Loxodonta africana]
          Length = 1057

 Score =  126 bits (316), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 90/276 (32%), Positives = 141/276 (51%), Gaps = 10/276 (3%)

Query: 204 IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 263
           +  PR  +       + V  GL  T F+   G V+TCG N  GQLGH  +  R  P+ + 
Sbjct: 22  VLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKS--RKKPEQVV 79

Query: 264 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH-GEQHDELQPRAIQTFRRKG 322
            L+   ++V ++ G ++ LA+   G VY++G  S+  LG  G +     PR I++     
Sbjct: 80  ALD-AQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSL--AD 136

Query: 323 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTL-PEPLSSLKSHLAVQVC 381
           I +V+V+ G  H +AL  +  V+ WG+   G LG G +  K   P+ L SL     +QV 
Sbjct: 137 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGLDCKKQASPKLLKSLLGIPFMQVA 196

Query: 382 ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYH 441
           A    +FVL  +G+++G+G   FG LG  D   +D+ + P +L SLR+  +  I  G  H
Sbjct: 197 AGGAHSFVLTLSGAIFGWGRNKFGQLGLNDE--NDRYV-PNLLKSLRSQKIVYICCGEDH 253

Query: 442 TVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF 477
           T  +T  G +F FG     QLGH++    + P ++F
Sbjct: 254 TAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVF 289



 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 104/333 (31%), Positives = 154/333 (46%), Gaps = 13/333 (3%)

Query: 135 GSSLCGVLGHGPETTQCVSFTRI-NFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSF 193
           G++  G LG G    + V   R  +F     V  V     H  FVL  G V+TCG N   
Sbjct: 5   GNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLG 64

Query: 194 CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGH-GD 252
             GH  + +   +P  V AL       V+ G   T  L  +G V+  G ++ GQLG  G 
Sbjct: 65  QLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGS 121

Query: 253 TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHG-EQHDELQ 311
                 P++I  L ++  +VQ+A G  + LA++    V+ +G      LG G +   +  
Sbjct: 122 EECIRVPRNIKSLADI-QIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGLDCKKQAS 180

Query: 312 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSS 371
           P+ +++    GI  ++V+AG  H   L  SG ++ WG+   G LG  DE D+ +P  L S
Sbjct: 181 PKLLKSLL--GIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKS 238

Query: 372 LKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHH 431
           L+S   V +C  +  T  L   G V+ FG  G+G LG      +   + PR +  L    
Sbjct: 239 LRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG---HNSTSHEINPRKVFELMGSI 295

Query: 432 VSQISTGLYHT-VVVTDRGRLFGFGDNERAQLG 463
           V+QI+ G  HT   V   GR++ FG     QLG
Sbjct: 296 VTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 80/291 (27%), Positives = 138/291 (47%), Gaps = 8/291 (2%)

Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 179
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V VS  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVSCGEAHTLALN 100

Query: 180 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 239
             GQV+  G +S    G   +   I  PR +++L  +   QV  G   +  L+    V  
Sbjct: 101 DKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLADIQIVQVACGYYHSLALSKASEVFC 160

Query: 240 CGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
            G N +GQLG G D   + +PK +  L  +   +Q+AAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKYGQLGLGLDCKKQASPKLLKSLLGI-PFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 299 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 358
             LG  +++D   P  +++ R + I  V +  G++H  AL   G V+T+G G  G LGH 
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRSQKI--VYICCGEDHTAALTKEGGVFTFGAGGYGQLGHN 277

Query: 359 DEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLG 408
               +  P  +  L   +  Q+ C R+  +  +  +G +Y FG  G G LG
Sbjct: 278 STSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 85/275 (30%), Positives = 133/275 (48%), Gaps = 12/275 (4%)

Query: 98  QSVEHSSDIVETSAGNM-QITTGRYHTLLISNS-SVFSCGSSLCGVLGH-GPETTQCVSF 154
           +S +    +V   A N+  ++ G  HTL +++   V++ G    G LG  G E  +C+  
Sbjct: 70  KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSE--ECIRV 127

Query: 155 TRINFPSAA--HVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEA 212
            R N  S A   +VQV+    H+  + ++ +VF  G N     G     +    P+L+++
Sbjct: 128 PR-NIKSLADIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGLDCKKQASPKLLKS 186

Query: 213 LKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV 272
           L G+P  QV AG   +  LT+ G +   G N  GQLG  D  DR  P  +  L     +V
Sbjct: 187 LLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRS-QKIV 245

Query: 273 QIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGD 332
            I  G  +  A+T  G V++FG+G    LGH     E+ PR +  F   G  V +++ G 
Sbjct: 246 YICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGR 303

Query: 333 EHVVA-LDSSGYVYTWGKGYCGALGHGDEIDKTLP 366
           +H  A + SSG +Y++G G  G LG G   ++  P
Sbjct: 304 QHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338



 Score = 79.3 bits (194), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 66/206 (32%), Positives = 99/206 (48%), Gaps = 6/206 (2%)

Query: 114 MQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +Q+  G YH+L +S +S VF  G +  G LG G +  +  S   +        +QV+A  
Sbjct: 140 VQVACGYYHSLALSKASEVFCWGQNKYGQLGLGLDCKKQASPKLLKSLLGIPFMQVAAGG 199

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            H+  +  SG +F  G N     G  D N   + P L+++L+      +  G + T  LT
Sbjct: 200 AHSFVLTLSGAIFGWGRNKFGQLGLNDENDR-YVPNLLKSLRSQKIVYICCGEDHTAALT 258

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVV 290
             G V T G+  +GQLGH  T     P+ +   E +GS+V QIA G  +  A V  +G +
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRI 316

Query: 291 YSFGSGSNFCLGHGEQHDELQPRAIQ 316
           YSFG G N  LG G   +   P  ++
Sbjct: 317 YSFGLGGNGQLGTGSTSNRKSPFTVK 342


>gi|198462494|ref|XP_002135307.1| GA28417 [Drosophila pseudoobscura pseudoobscura]
 gi|198150848|gb|EDY73934.1| GA28417 [Drosophila pseudoobscura pseudoobscura]
          Length = 1052

 Score =  126 bits (316), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 103/341 (30%), Positives = 159/341 (46%), Gaps = 17/341 (4%)

Query: 130 SVFSCGSSLCGVLGHG-PETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCG 188
           +++  G +  G LG G  E  Q +  ++I F   + V Q++    H  F+  +GQV+ CG
Sbjct: 2   ALYCWGDASHGQLGLGGIENEQILLPSQIEFKPDSPVQQIACGHRHTLFLTANGQVYACG 61

Query: 189 DNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQL 248
           +N     GH     P  RP  +  L+     Q+  G   +  LT  G + + G N  GQ+
Sbjct: 62  NNDHHQLGHE---LPTKRPLPIPELQAYVVIQIACGSRHSMALTEWGQILSWGDNDCGQV 118

Query: 249 GHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHD 308
           GH    D      I       +VVQIA G ++ LA+T  G +YS+  GSN     G Q  
Sbjct: 119 GHSTDNDVIELPKILRFLVSRTVVQIACGNNHSLALTSCGELYSW--GSNIYGQLGVQSP 176

Query: 309 ELQPRAIQTFRRK---GIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTL 365
           +  P +    R     GI +  ++ G  H   +  S  V+ WGK  CG LG  DE ++  
Sbjct: 177 KDLPHSNAPLRLTTILGIPLATIACGGNHSFLISKSSAVFGWGKNTCGQLGLNDEQNRAY 236

Query: 366 PEPLSSLKSHLAVQ--VCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRI 423
           P  L S+++ L V+   C  +   F L + G V+  G   +G LG    G S+  + PR+
Sbjct: 237 PSQLKSMRT-LGVRFVTCGDEYSVF-LTNEGGVFTCGAGNYGQLG---HGASNNEMIPRM 291

Query: 424 LDSLRAHHVSQISTGLYHTV-VVTDRGRLFGFGDNERAQLG 463
           +  L    ++Q++ G  HT+ +V   GR++ FG     QLG
Sbjct: 292 VIELMGSTITQVACGNRHTLALVPSGGRVYSFGLGASGQLG 332



 Score =  118 bits (295), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 95/302 (31%), Positives = 142/302 (47%), Gaps = 17/302 (5%)

Query: 115 QITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
           QI  G  HTL L +N  V++CG++    LGH   T + +    +    A  V+Q++    
Sbjct: 40  QIACGHRHTLFLTANGQVYACGNNDHHQLGHELPTKRPLPIPEL---QAYVVIQIACGSR 96

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
           H+  + + GQ+ + GDN     GH   N  I  P+++  L      Q+  G N +  LT 
Sbjct: 97  HSMALTEWGQILSWGDNDCGQVGHSTDNDVIELPKILRFLVSRTVVQIACGNNHSLALTS 156

Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG----SVVQIAAGPSYMLAVTGNGV 289
            G +++ GSN +GQLG     D   P S APL         +  IA G ++   ++ +  
Sbjct: 157 CGELYSWGSNIYGQLGVQSPKD--LPHSNAPLRLTTILGIPLATIACGGNHSFLISKSSA 214

Query: 290 VYSFGSGSNFC--LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 347
           V  FG G N C  LG  ++ +   P  +++ R  G+    V+ GDE+ V L + G V+T 
Sbjct: 215 V--FGWGKNTCGQLGLNDEQNRAYPSQLKSMRTLGVRF--VTCGDEYSVFLTNEGGVFTC 270

Query: 348 GKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDT-GSVYGFGWMGFGS 406
           G G  G LGHG   ++ +P  +  L      QV    R T  LV + G VY FG    G 
Sbjct: 271 GAGNYGQLGHGASNNEMIPRMVIELMGSTITQVACGNRHTLALVPSGGRVYSFGLGASGQ 330

Query: 407 LG 408
           LG
Sbjct: 331 LG 332



 Score =  109 bits (273), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 85/271 (31%), Positives = 129/271 (47%), Gaps = 18/271 (6%)

Query: 201 NRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPK 260
           N  I  P  +E     P +Q+  G   T FLT  G V+ CG+N H QLGH     RP P 
Sbjct: 21  NEQILLPSQIEFKPDSPVQQIACGHRHTLFLTANGQVYACGNNDHHQLGHELPTKRPLP- 79

Query: 261 SIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQ-PRAIQTFR 319
              P  +   V+QIA G  + +A+T  G + S+G      +GH   +D ++ P+ ++   
Sbjct: 80  --IPELQAYVVIQIACGSRHSMALTEWGQILSWGDNDCGQVGHSTDNDVIELPKILRFLV 137

Query: 320 RKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPE---PL---SSLK 373
            +   VV+++ G+ H +AL S G +Y+WG    G LG   +  K LP    PL   + L 
Sbjct: 138 SRT--VVQIACGNNHSLALTSCGELYSWGSNIYGQLGV--QSPKDLPHSNAPLRLTTILG 193

Query: 374 SHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVS 433
             LA   C     +F++  + +V+G+G    G LG  D         P  L S+R   V 
Sbjct: 194 IPLATIACGGNH-SFLISKSSAVFGWGKNTCGQLGLNDE---QNRAYPSQLKSMRTLGVR 249

Query: 434 QISTGLYHTVVVTDRGRLFGFGDNERAQLGH 464
            ++ G  ++V +T+ G +F  G     QLGH
Sbjct: 250 FVTCGDEYSVFLTNEGGVFTCGAGNYGQLGH 280



 Score = 99.0 bits (245), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 75/262 (28%), Positives = 127/262 (48%), Gaps = 15/262 (5%)

Query: 114 MQITTGRYHTLLISN-SSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +QI  G  H++ ++    + S G + CG +GH  +         + F  +  VVQ++   
Sbjct: 89  IQIACGSRHSMALTEWGQILSWGDNDCGQVGHSTDNDVIELPKILRFLVSRTVVQIACGN 148

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRD------TNRPIFRPRLVEALKGVPCKQVTAGLN 226
           NH+  +   G++++ G N     G +       +N P+   RL   L G+P   +  G N
Sbjct: 149 NHSLALTSCGELYSWGSNIYGQLGVQSPKDLPHSNAPL---RLTTIL-GIPLATIACGGN 204

Query: 227 FTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTG 286
            +  ++    V   G NT GQLG  D  +R  P  +  +  +G V  +  G  Y + +T 
Sbjct: 205 HSFLISKSSAVFGWGKNTCGQLGLNDEQNRAYPSQLKSMRTLG-VRFVTCGDEYSVFLTN 263

Query: 287 NGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL-DSSGYVY 345
            G V++ G+G+   LGHG  ++E+ PR +      G  + +V+ G+ H +AL  S G VY
Sbjct: 264 EGGVFTCGAGNYGQLGHGASNNEMIPRMV--IELMGSTITQVACGNRHTLALVPSGGRVY 321

Query: 346 TWGKGYCGALGHGDEIDKTLPE 367
           ++G G  G LG  + I +TLP+
Sbjct: 322 SFGLGASGQLGTRNTISQTLPK 343



 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 67/246 (27%), Positives = 111/246 (45%), Gaps = 14/246 (5%)

Query: 237 VHTCGSNTHGQLGHG----DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
           ++  G  +HGQLG G    + +  P+     P      V QIA G  + L +T NG VY+
Sbjct: 3   LYCWGDASHGQLGLGGIENEQILLPSQIEFKP---DSPVQQIACGHRHTLFLTANGQVYA 59

Query: 293 FGSGSNFCLGHGEQHDEL-QPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 351
            G+  +  LGH     EL   R +     +   V++++ G  H +AL   G + +WG   
Sbjct: 60  CGNNDHHQLGH-----ELPTKRPLPIPELQAYVVIQIACGSRHSMALTEWGQILSWGDND 114

Query: 352 CGALGHGDEIDKT-LPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFP 410
           CG +GH  + D   LP+ L  L S   VQ+      +  L   G +Y +G   +G LG  
Sbjct: 115 CGQVGHSTDNDVIELPKILRFLVSRTVVQIACGNNHSLALTSCGELYSWGSNIYGQLGVQ 174

Query: 411 DRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGC 470
                     P  L ++    ++ I+ G  H+ +++    +FG+G N   QLG +  +  
Sbjct: 175 SPKDLPHSNAPLRLTTILGIPLATIACGGNHSFLISKSSAVFGWGKNTCGQLGLNDEQNR 234

Query: 471 LEPTEI 476
             P+++
Sbjct: 235 AYPSQL 240



 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 47/149 (31%), Positives = 69/149 (46%), Gaps = 4/149 (2%)

Query: 116 ITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           I  G  H+ LIS SS VF  G + CG LG   E  +    +++       V  V+  + +
Sbjct: 199 IACGGNHSFLISKSSAVFGWGKNTCGQLGLNDEQNRAYP-SQLKSMRTLGVRFVTCGDEY 257

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFT-GFLTI 233
           + F+   G VFTCG  +    GH  +N  +  PR+V  L G    QV  G   T   +  
Sbjct: 258 SVFLTNEGGVFTCGAGNYGQLGHGASNNEMI-PRMVIELMGSTITQVACGNRHTLALVPS 316

Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPTPKSI 262
            G V++ G    GQLG  +T+ +  PK +
Sbjct: 317 GGRVYSFGLGASGQLGTRNTISQTLPKVV 345


>gi|344275073|ref|XP_003409338.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
           2 [Loxodonta africana]
          Length = 1049

 Score =  126 bits (316), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 90/276 (32%), Positives = 141/276 (51%), Gaps = 10/276 (3%)

Query: 204 IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 263
           +  PR  +       + V  GL  T F+   G V+TCG N  GQLGH  +  R  P+ + 
Sbjct: 22  VLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKS--RKKPEQVV 79

Query: 264 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH-GEQHDELQPRAIQTFRRKG 322
            L+   ++V ++ G ++ LA+   G VY++G  S+  LG  G +     PR I++     
Sbjct: 80  ALD-AQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSL--AD 136

Query: 323 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTL-PEPLSSLKSHLAVQVC 381
           I +V+V+ G  H +AL  +  V+ WG+   G LG G +  K   P+ L SL     +QV 
Sbjct: 137 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGLDCKKQASPKLLKSLLGIPFMQVA 196

Query: 382 ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYH 441
           A    +FVL  +G+++G+G   FG LG  D   +D+ + P +L SLR+  +  I  G  H
Sbjct: 197 AGGAHSFVLTLSGAIFGWGRNKFGQLGLNDE--NDRYV-PNLLKSLRSQKIVYICCGEDH 253

Query: 442 TVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF 477
           T  +T  G +F FG     QLGH++    + P ++F
Sbjct: 254 TAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVF 289



 Score =  123 bits (308), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 104/333 (31%), Positives = 154/333 (46%), Gaps = 13/333 (3%)

Query: 135 GSSLCGVLGHGPETTQCVSFTRI-NFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSF 193
           G++  G LG G    + V   R  +F     V  V     H  FVL  G V+TCG N   
Sbjct: 5   GNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLG 64

Query: 194 CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGH-GD 252
             GH  + +   +P  V AL       V+ G   T  L  +G V+  G ++ GQLG  G 
Sbjct: 65  QLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGS 121

Query: 253 TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHG-EQHDELQ 311
                 P++I  L ++  +VQ+A G  + LA++    V+ +G      LG G +   +  
Sbjct: 122 EECIRVPRNIKSLADI-QIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGLDCKKQAS 180

Query: 312 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSS 371
           P+ +++    GI  ++V+AG  H   L  SG ++ WG+   G LG  DE D+ +P  L S
Sbjct: 181 PKLLKSLL--GIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKS 238

Query: 372 LKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHH 431
           L+S   V +C  +  T  L   G V+ FG  G+G LG      +   + PR +  L    
Sbjct: 239 LRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG---HNSTSHEINPRKVFELMGSI 295

Query: 432 VSQISTGLYHT-VVVTDRGRLFGFGDNERAQLG 463
           V+QI+ G  HT   V   GR++ FG     QLG
Sbjct: 296 VTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 80/291 (27%), Positives = 138/291 (47%), Gaps = 8/291 (2%)

Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 179
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V VS  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVSCGEAHTLALN 100

Query: 180 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 239
             GQV+  G +S    G   +   I  PR +++L  +   QV  G   +  L+    V  
Sbjct: 101 DKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLADIQIVQVACGYYHSLALSKASEVFC 160

Query: 240 CGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
            G N +GQLG G D   + +PK +  L  +   +Q+AAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKYGQLGLGLDCKKQASPKLLKSLLGI-PFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 299 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 358
             LG  +++D   P  +++ R + I  V +  G++H  AL   G V+T+G G  G LGH 
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRSQKI--VYICCGEDHTAALTKEGGVFTFGAGGYGQLGHN 277

Query: 359 DEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLG 408
               +  P  +  L   +  Q+ C R+  +  +  +G +Y FG  G G LG
Sbjct: 278 STSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 85/275 (30%), Positives = 133/275 (48%), Gaps = 12/275 (4%)

Query: 98  QSVEHSSDIVETSAGNM-QITTGRYHTLLISNS-SVFSCGSSLCGVLGH-GPETTQCVSF 154
           +S +    +V   A N+  ++ G  HTL +++   V++ G    G LG  G E  +C+  
Sbjct: 70  KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSE--ECIRV 127

Query: 155 TRINFPSAA--HVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEA 212
            R N  S A   +VQV+    H+  + ++ +VF  G N     G     +    P+L+++
Sbjct: 128 PR-NIKSLADIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGLDCKKQASPKLLKS 186

Query: 213 LKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV 272
           L G+P  QV AG   +  LT+ G +   G N  GQLG  D  DR  P  +  L     +V
Sbjct: 187 LLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRS-QKIV 245

Query: 273 QIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGD 332
            I  G  +  A+T  G V++FG+G    LGH     E+ PR +  F   G  V +++ G 
Sbjct: 246 YICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGR 303

Query: 333 EHVVA-LDSSGYVYTWGKGYCGALGHGDEIDKTLP 366
           +H  A + SSG +Y++G G  G LG G   ++  P
Sbjct: 304 QHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338



 Score = 79.3 bits (194), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 66/206 (32%), Positives = 99/206 (48%), Gaps = 6/206 (2%)

Query: 114 MQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +Q+  G YH+L +S +S VF  G +  G LG G +  +  S   +        +QV+A  
Sbjct: 140 VQVACGYYHSLALSKASEVFCWGQNKYGQLGLGLDCKKQASPKLLKSLLGIPFMQVAAGG 199

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            H+  +  SG +F  G N     G  D N   + P L+++L+      +  G + T  LT
Sbjct: 200 AHSFVLTLSGAIFGWGRNKFGQLGLNDENDR-YVPNLLKSLRSQKIVYICCGEDHTAALT 258

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVV 290
             G V T G+  +GQLGH  T     P+ +   E +GS+V QIA G  +  A V  +G +
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRI 316

Query: 291 YSFGSGSNFCLGHGEQHDELQPRAIQ 316
           YSFG G N  LG G   +   P  ++
Sbjct: 317 YSFGLGGNGQLGTGSTSNRKSPFTVK 342


>gi|413951231|gb|AFW83880.1| putative regulator of chromosome condensation (RCC1) family protein
           [Zea mays]
          Length = 959

 Score =  126 bits (316), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 100/323 (30%), Positives = 151/323 (46%), Gaps = 20/323 (6%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V  V     HAA V ++G+VFT G+ S    GH      +  PRLVE+L       V  G
Sbjct: 79  VYHVDCGVKHAALVTKNGEVFTWGEESGGRLGHGSREDSVH-PRLVESLAICNVDIVACG 137

Query: 225 LNFTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 282
              T  +T  G ++T G  TH  G LG+G  +    PK I+ + E   V  ++ G  +  
Sbjct: 138 EFHTCAVTTSGELYTWGDGTHNIGLLGNGTDVSHWIPKRISGVLEGHQVAYVSCGTWHTA 197

Query: 283 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL---- 338
            VT  G +++FG G+   LGHG +     PR +++    G+  + V+ G  H  A+    
Sbjct: 198 LVTSRGQLFTFGDGTFGVLGHGNRESFSCPREVESL--SGLKTIAVACGVWHTAAVVEVI 255

Query: 339 -------DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 391
                   SSG ++TWG G    LGHGD+  K  P  ++SL  +   ++      T  L 
Sbjct: 256 VTQSSSSMSSGKLFTWGDGDKHRLGHGDKEPKLKPTCVASLIDYDFCRIACGHSLTVGLT 315

Query: 392 DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRL 451
            +G V   G   +G LG P    SD  L P +++ +   HV Q++ G YH  V+T++  +
Sbjct: 316 TSGQVLSMGNTVYGQLGNPR---SDGKL-PCLIEDIMGEHVVQVACGSYHVAVLTNKSEV 371

Query: 452 FGFGDNERAQLGHDTLRGCLEPT 474
           F +G     +LGH  +     PT
Sbjct: 372 FTWGKGANGRLGHGDVEDRKIPT 394



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 85/273 (31%), Positives = 123/273 (45%), Gaps = 21/273 (7%)

Query: 116 ITTGRYHTLLISNSS---VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +  G +HT  ++ S     +  G+   G+LG+G + +  +            V  VS   
Sbjct: 134 VACGEFHTCAVTTSGELYTWGDGTHNIGLLGNGTDVSHWIPKRISGVLEGHQVAYVSCGT 193

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFR-PRLVEALKGVPCKQVTAGLNFTGFL 231
            H A V   GQ+FT GD +    GH   NR  F  PR VE+L G+    V  G+  T  +
Sbjct: 194 WHTALVTSRGQLFTFGDGTFGVLGH--GNRESFSCPREVESLSGLKTIAVACGVWHTAAV 251

Query: 232 T-----------IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 280
                         G + T G     +LGHGD   +  P  +A L +     +IA G S 
Sbjct: 252 VEVIVTQSSSSMSSGKLFTWGDGDKHRLGHGDKEPKLKPTCVASLIDY-DFCRIACGHSL 310

Query: 281 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 340
            + +T +G V S G+     LG+     +L P  I+     G HVV+V+ G  HV  L +
Sbjct: 311 TVGLTTSGQVLSMGNTVYGQLGNPRSDGKL-PCLIEDI--MGEHVVQVACGSYHVAVLTN 367

Query: 341 SGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
              V+TWGKG  G LGHGD  D+ +P  + SL+
Sbjct: 368 KSEVFTWGKGANGRLGHGDVEDRKIPTLVESLR 400



 Score = 95.9 bits (237), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 73/243 (30%), Positives = 118/243 (48%), Gaps = 25/243 (10%)

Query: 252 DTLDRPTPKS----IAPLEE--VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGE 305
           DT+ R T K+      PLE   V  V  +  G  +   VT NG V+++G  S   LGHG 
Sbjct: 54  DTVIRSTAKADFLLPKPLESKLVLDVYHVDCGVKHAALVTKNGEVFTWGEESGGRLGHGS 113

Query: 306 QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY--CGALGHGDEIDK 363
           + D + PR +++     + +  V+ G+ H  A+ +SG +YTWG G    G LG+G ++  
Sbjct: 114 REDSVHPRLVESLAICNVDI--VACGEFHTCAVTTSGELYTWGDGTHNIGLLGNGTDVSH 171

Query: 364 TLPEPLSS-LKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPR 422
            +P+ +S  L+ H    V      T ++   G ++ FG   FG LG  +R   +    PR
Sbjct: 172 WIPKRISGVLEGHQVAYVSCGTWHTALVTSRGQLFTFGDGTFGVLGHGNR---ESFSCPR 228

Query: 423 ILDSLRAHHVSQISTGLYHTVVVTD-----------RGRLFGFGDNERAQLGHDTLRGCL 471
            ++SL       ++ G++HT  V +            G+LF +GD ++ +LGH      L
Sbjct: 229 EVESLSGLKTIAVACGVWHTAAVVEVIVTQSSSSMSSGKLFTWGDGDKHRLGHGDKEPKL 288

Query: 472 EPT 474
           +PT
Sbjct: 289 KPT 291



 Score = 74.7 bits (182), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 64/223 (28%), Positives = 104/223 (46%), Gaps = 22/223 (9%)

Query: 116 ITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGP-ETTQCVSFTRINFPSAAHVVQVSASEN 173
           ++ G +HT L+ S   +F+ G    GVLGHG  E+  C     +   S    + V+    
Sbjct: 189 VSCGTWHTALVTSRGQLFTFGDGTFGVLGHGNRESFSCPR--EVESLSGLKTIAVACGVW 246

Query: 174 HAAFVLQ-----------SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 222
           H A V++           SG++FT GD      GH D   P  +P  V +L      ++ 
Sbjct: 247 HTAAVVEVIVTQSSSSMSSGKLFTWGDGDKHRLGHGD-KEPKLKPTCVASLIDYDFCRIA 305

Query: 223 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEV--GSVVQIAAGPSY 280
            G + T  LT  G V + G+  +GQLG+     R   K    +E++    VVQ+A G  +
Sbjct: 306 CGHSLTVGLTTSGQVLSMGNTVYGQLGN----PRSDGKLPCLIEDIMGEHVVQVACGSYH 361

Query: 281 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGI 323
           +  +T    V+++G G+N  LGHG+  D   P  +++ R + +
Sbjct: 362 VAVLTNKSEVFTWGKGANGRLGHGDVEDRKIPTLVESLRDRAV 404



 Score = 69.7 bits (169), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 53/170 (31%), Positives = 78/170 (45%), Gaps = 4/170 (2%)

Query: 308 DELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPE 367
           D L P+ +++  +  + V  V  G +H   +  +G V+TWG+   G LGHG   D   P 
Sbjct: 64  DFLLPKPLES--KLVLDVYHVDCGVKHAALVTKNGEVFTWGEESGGRLGHGSREDSVHPR 121

Query: 368 PLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRP-RILDS 426
            + SL       V   +  T  +  +G +Y +G  G  ++G    G       P RI   
Sbjct: 122 LVESLAICNVDIVACGEFHTCAVTTSGELYTWG-DGTHNIGLLGNGTDVSHWIPKRISGV 180

Query: 427 LRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 476
           L  H V+ +S G +HT +VT RG+LF FGD     LGH        P E+
Sbjct: 181 LEGHQVAYVSCGTWHTALVTSRGQLFTFGDGTFGVLGHGNRESFSCPREV 230


>gi|194748527|ref|XP_001956696.1| GF24453 [Drosophila ananassae]
 gi|190623978|gb|EDV39502.1| GF24453 [Drosophila ananassae]
          Length = 1058

 Score =  126 bits (316), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 104/355 (29%), Positives = 164/355 (46%), Gaps = 15/355 (4%)

Query: 125 LISNSSVFSCGSSLCGVLGHG-PETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQ 183
           + + + ++  G++  G LG G  E  Q ++ +++ +   + + QV+    H  F+  SG+
Sbjct: 1   MTAGTELYCWGNTSHGQLGLGGIEDEQILTPSQVPWTPDSAIKQVACGHRHTLFLTSSGR 60

Query: 184 VFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 243
           V+ CG N     GH   + P  RP L+  L      Q+  G   +  L+  G V + G N
Sbjct: 61  VYACGSNDHSQLGH---DLPTKRPLLIPELLDYVVVQIACGSRHSMALSEWGQVLSWGDN 117

Query: 244 THGQLGHGDTLD-RPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLG 302
             GQLG     D    PK +  L    +VVQIA G ++ LA+T  G +YS+GS     LG
Sbjct: 118 DCGQLGQATDQDIVQLPKIVRQLVS-KTVVQIACGNNHSLALTSCGELYSWGSNIYGQLG 176

Query: 303 ---HGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGD 359
                E     QP  + T    GI V  ++ G  H   +  S  V+ WG+  CG LG  D
Sbjct: 177 VNTPKEVTHSNQPVRLTTLL--GIPVAAIACGGNHSFIISKSSAVFGWGRNNCGQLGLND 234

Query: 360 EIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVL 419
           E  ++ P  L +L++     V      +  L + G V+  G   +G LG    G     +
Sbjct: 235 ETSRSYPTQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGAYGQLG---HGFGANEM 291

Query: 420 RPRILDSLRAHHVSQISTGLYHTV-VVTDRGRLFGFGDNERAQLGHDTLRGCLEP 473
            PR++  L    ++Q++ G  HT+ +V  RGR++GFG     QLG  + +    P
Sbjct: 292 LPRMVMELMGSTITQVACGNRHTLALVPSRGRVYGFGLGSSGQLGTRSTKSLTLP 346



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 95/306 (31%), Positives = 139/306 (45%), Gaps = 25/306 (8%)

Query: 115 QITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
           Q+  G  HTL +++S  V++CGS+    LGH   T + +    +       VVQ++    
Sbjct: 44  QVACGHRHTLFLTSSGRVYACGSNDHSQLGHDLPTKRPLLIPEL---LDYVVVQIACGSR 100

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
           H+  + + GQV + GDN     G       +  P++V  L      Q+  G N +  LT 
Sbjct: 101 HSMALSEWGQVLSWGDNDCGQLGQATDQDIVQLPKIVRQLVSKTVVQIACGNNHSLALTS 160

Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIA----PLEEVG----SVVQIAAGPSYMLAVT 285
            G +++ GSN +GQLG        TPK +     P+         V  IA G ++   ++
Sbjct: 161 CGELYSWGSNIYGQLGVN------TPKEVTHSNQPVRLTTLLGIPVAAIACGGNHSFIIS 214

Query: 286 GNGVVYSFGSGSNFC--LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 343
            +  V  FG G N C  LG  ++     P  ++T R  G+    V+ GDE  V L + G 
Sbjct: 215 KSSAV--FGWGRNNCGQLGLNDETSRSYPTQLKTLRTLGVRF--VACGDEFSVFLTNEGG 270

Query: 344 VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDT-GSVYGFGWM 402
           V+T G G  G LGHG   ++ LP  +  L      QV    R T  LV + G VYGFG  
Sbjct: 271 VFTCGAGAYGQLGHGFGANEMLPRMVMELMGSTITQVACGNRHTLALVPSRGRVYGFGLG 330

Query: 403 GFGSLG 408
             G LG
Sbjct: 331 SSGQLG 336



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 71/249 (28%), Positives = 112/249 (44%), Gaps = 8/249 (3%)

Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRP--TPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG 288
           +T    ++  G+ +HGQLG G   D    TP  + P     ++ Q+A G  + L +T +G
Sbjct: 1   MTAGTELYCWGNTSHGQLGLGGIEDEQILTPSQV-PWTPDSAIKQVACGHRHTLFLTSSG 59

Query: 289 VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 348
            VY+ GS  +  LGH    D    R +         VV+++ G  H +AL   G V +WG
Sbjct: 60  RVYACGSNDHSQLGH----DLPTKRPLLIPELLDYVVVQIACGSRHSMALSEWGQVLSWG 115

Query: 349 KGYCGALGHGDEIDKT-LPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSL 407
              CG LG   + D   LP+ +  L S   VQ+      +  L   G +Y +G   +G L
Sbjct: 116 DNDCGQLGQATDQDIVQLPKIVRQLVSKTVVQIACGNNHSLALTSCGELYSWGSNIYGQL 175

Query: 408 GFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTL 467
           G           +P  L +L    V+ I+ G  H+ +++    +FG+G N   QLG +  
Sbjct: 176 GVNTPKEVTHSNQPVRLTTLLGIPVAAIACGGNHSFIISKSSAVFGWGRNNCGQLGLNDE 235

Query: 468 RGCLEPTEI 476
                PT++
Sbjct: 236 TSRSYPTQL 244



 Score = 50.8 bits (120), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 47/149 (31%), Positives = 66/149 (44%), Gaps = 4/149 (2%)

Query: 116 ITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           I  G  H+ +IS SS VF  G + CG LG   ET++    T++       V  V+  +  
Sbjct: 203 IACGGNHSFIISKSSAVFGWGRNNCGQLGLNDETSRSYP-TQLKTLRTLGVRFVACGDEF 261

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFT-GFLTI 233
           + F+   G VFTCG  +    GH      +  PR+V  L G    QV  G   T   +  
Sbjct: 262 SVFLTNEGGVFTCGAGAYGQLGHGFGANEML-PRMVMELMGSTITQVACGNRHTLALVPS 320

Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPTPKSI 262
           RG V+  G  + GQLG   T     P+ +
Sbjct: 321 RGRVYGFGLGSSGQLGTRSTKSLTLPQVV 349


>gi|410975285|ref|XP_003994063.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like, partial
           [Felis catus]
          Length = 621

 Score =  125 bits (315), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 89/276 (32%), Positives = 140/276 (50%), Gaps = 10/276 (3%)

Query: 204 IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 263
           +  PR  +       + V  GL  T F+   G V+TCG N  GQLGH  +  R  P+ + 
Sbjct: 22  VLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKS--RKKPEQVV 79

Query: 264 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH-GEQHDELQPRAIQTFRRKG 322
            L+   ++V ++ G ++ LA+   G VY++G  S+  LG  G +     PR I++     
Sbjct: 80  ALD-AQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSL--SD 136

Query: 323 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTL-PEPLSSLKSHLAVQVC 381
           I +V+V+ G  H +AL  +  V+ WG+   G LG G +  K   P+ + SL     +QV 
Sbjct: 137 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQVA 196

Query: 382 ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYH 441
           A    +FVL  +G+++G+G   FG LG  D   +D+ + P +L SLR   +  I  G  H
Sbjct: 197 AGGAHSFVLTLSGAIFGWGRNKFGQLGLNDE--NDRYV-PNLLKSLRTQKIVYICCGEDH 253

Query: 442 TVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF 477
           T  +T  G +F FG     QLGH++    + P ++F
Sbjct: 254 TAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVF 289



 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 96/302 (31%), Positives = 142/302 (47%), Gaps = 12/302 (3%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V  V     H  FVL  G V+TCG N     GH  + +   +P  V AL       V+ G
Sbjct: 36  VRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRK---KPEQVVALDAQNIVAVSCG 92

Query: 225 LNFTGFLTIRGHVHTCGSNTHGQLGH-GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
              T  L  +G V+  G ++ GQLG  G       P++I  L ++  +VQ+A G  + LA
Sbjct: 93  EAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDI-QIVQVACGYYHSLA 151

Query: 284 VTGNGVVYSFGSGSNFCLGHG-EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
           ++    V+ +G      LG G +   +  P+ I++    GI  ++V+AG  H   L  SG
Sbjct: 152 LSKASEVFCWGQNKYGQLGLGIDCKKQASPQLIKSLL--GIPFMQVAAGGAHSFVLTLSG 209

Query: 343 YVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWM 402
            ++ WG+   G LG  DE D+ +P  L SL++   V +C  +  T  L   G V+ FG  
Sbjct: 210 AIFGWGRNKFGQLGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAG 269

Query: 403 GFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHT-VVVTDRGRLFGFGDNERAQ 461
           G+G LG      +   + PR +  L    V+QI+ G  HT   V   GR++ FG     Q
Sbjct: 270 GYGQLG---HNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQ 326

Query: 462 LG 463
           LG
Sbjct: 327 LG 328



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 80/291 (27%), Positives = 138/291 (47%), Gaps = 8/291 (2%)

Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 179
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V VS  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVSCGEAHTLALN 100

Query: 180 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 239
             GQV+  G +S    G   +   I  PR +++L  +   QV  G   +  L+    V  
Sbjct: 101 DKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFC 160

Query: 240 CGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
            G N +GQLG G D   + +P+ I  L  +   +Q+AAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKYGQLGLGIDCKKQASPQLIKSLLGI-PFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 299 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 358
             LG  +++D   P  +++ R + I  V +  G++H  AL   G V+T+G G  G LGH 
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRTQKI--VYICCGEDHTAALTKEGGVFTFGAGGYGQLGHN 277

Query: 359 DEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLG 408
               +  P  +  L   +  Q+ C R+  +  +  +G +Y FG  G G LG
Sbjct: 278 STSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 84/274 (30%), Positives = 132/274 (48%), Gaps = 10/274 (3%)

Query: 98  QSVEHSSDIVETSAGNM-QITTGRYHTLLISNS-SVFSCGSSLCGVLGH-GPETTQCVSF 154
           +S +    +V   A N+  ++ G  HTL +++   V++ G    G LG  G E  +C+  
Sbjct: 70  KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSE--ECIRV 127

Query: 155 TR-INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEAL 213
            R I   S   +VQV+    H+  + ++ +VF  G N     G     +    P+L+++L
Sbjct: 128 PRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQASPQLIKSL 187

Query: 214 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
            G+P  QV AG   +  LT+ G +   G N  GQLG  D  DR  P  +  L     +V 
Sbjct: 188 LGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLR-TQKIVY 246

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           I  G  +  A+T  G V++FG+G    LGH     E+ PR +  F   G  V +++ G +
Sbjct: 247 ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQ 304

Query: 334 HVVA-LDSSGYVYTWGKGYCGALGHGDEIDKTLP 366
           H  A + SSG +Y++G G  G LG G   ++  P
Sbjct: 305 HTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 77/251 (30%), Positives = 119/251 (47%), Gaps = 17/251 (6%)

Query: 70  IYA-GMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLISN 128
           +YA G+  + Q+ LL       +  +R  ++++  SDI       +Q+  G YH+L +S 
Sbjct: 105 VYAWGLDSDGQLGLLGS-----EECIRVPRNIKSLSDIQI-----VQVACGYYHSLALSK 154

Query: 129 SS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTC 187
           +S VF  G +  G LG G +  +  S   I        +QV+A   H+  +  SG +F  
Sbjct: 155 ASEVFCWGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGW 214

Query: 188 GDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQ 247
           G N     G  D N   + P L+++L+      +  G + T  LT  G V T G+  +GQ
Sbjct: 215 GRNKFGQLGLNDENDR-YVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQ 273

Query: 248 LGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVVYSFGSGSNFCLGHGE 305
           LGH  T     P+ +   E +GS+V QIA G  +  A V  +G +YSFG G N  LG G 
Sbjct: 274 LGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGS 331

Query: 306 QHDELQPRAIQ 316
             +   P  ++
Sbjct: 332 TSNRKSPFTVK 342


>gi|301755906|ref|XP_002913789.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
           2 [Ailuropoda melanoleuca]
          Length = 1049

 Score =  125 bits (315), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 89/276 (32%), Positives = 140/276 (50%), Gaps = 10/276 (3%)

Query: 204 IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 263
           +  PR  +       + V  GL  T F+   G V+TCG N  GQLGH  +  R  P+ + 
Sbjct: 22  VLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKS--RKKPEQVV 79

Query: 264 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH-GEQHDELQPRAIQTFRRKG 322
            L+   ++V ++ G ++ LA+   G VY++G  S+  LG  G +     PR I++     
Sbjct: 80  ALD-AQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSL--SD 136

Query: 323 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTL-PEPLSSLKSHLAVQVC 381
           I +V+V+ G  H +AL  +  V+ WG+   G LG G +  K   P+ + SL     +QV 
Sbjct: 137 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQVA 196

Query: 382 ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYH 441
           A    +FVL  +G+++G+G   FG LG  D   +D+ + P +L SLR   +  I  G  H
Sbjct: 197 AGGAHSFVLTLSGAIFGWGRNKFGQLGLNDE--NDRYV-PNLLKSLRTQKIVYICCGEDH 253

Query: 442 TVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF 477
           T  +T  G +F FG     QLGH++    + P ++F
Sbjct: 254 TAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVF 289



 Score =  123 bits (308), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 104/333 (31%), Positives = 154/333 (46%), Gaps = 13/333 (3%)

Query: 135 GSSLCGVLGHGPETTQCVSFTRI-NFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSF 193
           G++  G LG G    + V   R  +F     V  V     H  FVL  G V+TCG N   
Sbjct: 5   GNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLG 64

Query: 194 CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGH-GD 252
             GH  + +   +P  V AL       V+ G   T  L  +G V+  G ++ GQLG  G 
Sbjct: 65  QLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGS 121

Query: 253 TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHG-EQHDELQ 311
                 P++I  L ++  +VQ+A G  + LA++    V+ +G      LG G +   +  
Sbjct: 122 EECIRVPRNIKSLSDI-QIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQAS 180

Query: 312 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSS 371
           P+ I++    GI  ++V+AG  H   L  SG ++ WG+   G LG  DE D+ +P  L S
Sbjct: 181 PQLIKSLL--GIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKS 238

Query: 372 LKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHH 431
           L++   V +C  +  T  L   G V+ FG  G+G LG      +   + PR +  L    
Sbjct: 239 LRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG---HNSTSHEINPRKVFELMGSI 295

Query: 432 VSQISTGLYHT-VVVTDRGRLFGFGDNERAQLG 463
           V+QI+ G  HT   V   GR++ FG     QLG
Sbjct: 296 VTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 80/291 (27%), Positives = 138/291 (47%), Gaps = 8/291 (2%)

Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 179
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V VS  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVSCGEAHTLALN 100

Query: 180 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 239
             GQV+  G +S    G   +   I  PR +++L  +   QV  G   +  L+    V  
Sbjct: 101 DKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFC 160

Query: 240 CGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
            G N +GQLG G D   + +P+ I  L  +   +Q+AAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKYGQLGLGIDCKKQASPQLIKSLLGI-PFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 299 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 358
             LG  +++D   P  +++ R + I  V +  G++H  AL   G V+T+G G  G LGH 
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRTQKI--VYICCGEDHTAALTKEGGVFTFGAGGYGQLGHN 277

Query: 359 DEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLG 408
               +  P  +  L   +  Q+ C R+  +  +  +G +Y FG  G G LG
Sbjct: 278 STSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  101 bits (252), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 84/274 (30%), Positives = 132/274 (48%), Gaps = 10/274 (3%)

Query: 98  QSVEHSSDIVETSAGNM-QITTGRYHTLLISNS-SVFSCGSSLCGVLGH-GPETTQCVSF 154
           +S +    +V   A N+  ++ G  HTL +++   V++ G    G LG  G E  +C+  
Sbjct: 70  KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSE--ECIRV 127

Query: 155 TR-INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEAL 213
            R I   S   +VQV+    H+  + ++ +VF  G N     G     +    P+L+++L
Sbjct: 128 PRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQASPQLIKSL 187

Query: 214 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
            G+P  QV AG   +  LT+ G +   G N  GQLG  D  DR  P  +  L     +V 
Sbjct: 188 LGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLR-TQKIVY 246

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           I  G  +  A+T  G V++FG+G    LGH     E+ PR +  F   G  V +++ G +
Sbjct: 247 ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQ 304

Query: 334 HVVA-LDSSGYVYTWGKGYCGALGHGDEIDKTLP 366
           H  A + SSG +Y++G G  G LG G   ++  P
Sbjct: 305 HTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 77/251 (30%), Positives = 119/251 (47%), Gaps = 17/251 (6%)

Query: 70  IYA-GMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLISN 128
           +YA G+  + Q+ LL       +  +R  ++++  SDI       +Q+  G YH+L +S 
Sbjct: 105 VYAWGLDSDGQLGLLGS-----EECIRVPRNIKSLSDI-----QIVQVACGYYHSLALSK 154

Query: 129 SS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTC 187
           +S VF  G +  G LG G +  +  S   I        +QV+A   H+  +  SG +F  
Sbjct: 155 ASEVFCWGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGW 214

Query: 188 GDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQ 247
           G N     G  D N   + P L+++L+      +  G + T  LT  G V T G+  +GQ
Sbjct: 215 GRNKFGQLGLNDENDR-YVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQ 273

Query: 248 LGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVVYSFGSGSNFCLGHGE 305
           LGH  T     P+ +   E +GS+V QIA G  +  A V  +G +YSFG G N  LG G 
Sbjct: 274 LGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGS 331

Query: 306 QHDELQPRAIQ 316
             +   P  ++
Sbjct: 332 TSNRKSPFTVK 342


>gi|301755904|ref|XP_002913788.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
           1 [Ailuropoda melanoleuca]
 gi|281346973|gb|EFB22557.1| hypothetical protein PANDA_001627 [Ailuropoda melanoleuca]
          Length = 1057

 Score =  125 bits (315), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 89/276 (32%), Positives = 140/276 (50%), Gaps = 10/276 (3%)

Query: 204 IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 263
           +  PR  +       + V  GL  T F+   G V+TCG N  GQLGH  +  R  P+ + 
Sbjct: 22  VLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKS--RKKPEQVV 79

Query: 264 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH-GEQHDELQPRAIQTFRRKG 322
            L+   ++V ++ G ++ LA+   G VY++G  S+  LG  G +     PR I++     
Sbjct: 80  ALD-AQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSL--SD 136

Query: 323 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTL-PEPLSSLKSHLAVQVC 381
           I +V+V+ G  H +AL  +  V+ WG+   G LG G +  K   P+ + SL     +QV 
Sbjct: 137 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQVA 196

Query: 382 ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYH 441
           A    +FVL  +G+++G+G   FG LG  D   +D+ + P +L SLR   +  I  G  H
Sbjct: 197 AGGAHSFVLTLSGAIFGWGRNKFGQLGLNDE--NDRYV-PNLLKSLRTQKIVYICCGEDH 253

Query: 442 TVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF 477
           T  +T  G +F FG     QLGH++    + P ++F
Sbjct: 254 TAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVF 289



 Score =  123 bits (308), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 104/333 (31%), Positives = 154/333 (46%), Gaps = 13/333 (3%)

Query: 135 GSSLCGVLGHGPETTQCVSFTRI-NFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSF 193
           G++  G LG G    + V   R  +F     V  V     H  FVL  G V+TCG N   
Sbjct: 5   GNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLG 64

Query: 194 CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGH-GD 252
             GH  + +   +P  V AL       V+ G   T  L  +G V+  G ++ GQLG  G 
Sbjct: 65  QLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGS 121

Query: 253 TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHG-EQHDELQ 311
                 P++I  L ++  +VQ+A G  + LA++    V+ +G      LG G +   +  
Sbjct: 122 EECIRVPRNIKSLSDI-QIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQAS 180

Query: 312 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSS 371
           P+ I++    GI  ++V+AG  H   L  SG ++ WG+   G LG  DE D+ +P  L S
Sbjct: 181 PQLIKSLL--GIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKS 238

Query: 372 LKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHH 431
           L++   V +C  +  T  L   G V+ FG  G+G LG      +   + PR +  L    
Sbjct: 239 LRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG---HNSTSHEINPRKVFELMGSI 295

Query: 432 VSQISTGLYHT-VVVTDRGRLFGFGDNERAQLG 463
           V+QI+ G  HT   V   GR++ FG     QLG
Sbjct: 296 VTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  110 bits (275), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 80/291 (27%), Positives = 138/291 (47%), Gaps = 8/291 (2%)

Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 179
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V VS  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVSCGEAHTLALN 100

Query: 180 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 239
             GQV+  G +S    G   +   I  PR +++L  +   QV  G   +  L+    V  
Sbjct: 101 DKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFC 160

Query: 240 CGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
            G N +GQLG G D   + +P+ I  L  +   +Q+AAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKYGQLGLGIDCKKQASPQLIKSLLGI-PFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 299 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 358
             LG  +++D   P  +++ R + I  V +  G++H  AL   G V+T+G G  G LGH 
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRTQKI--VYICCGEDHTAALTKEGGVFTFGAGGYGQLGHN 277

Query: 359 DEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLG 408
               +  P  +  L   +  Q+ C R+  +  +  +G +Y FG  G G LG
Sbjct: 278 STSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  101 bits (251), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 84/274 (30%), Positives = 132/274 (48%), Gaps = 10/274 (3%)

Query: 98  QSVEHSSDIVETSAGNM-QITTGRYHTLLISNS-SVFSCGSSLCGVLGH-GPETTQCVSF 154
           +S +    +V   A N+  ++ G  HTL +++   V++ G    G LG  G E  +C+  
Sbjct: 70  KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSE--ECIRV 127

Query: 155 TR-INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEAL 213
            R I   S   +VQV+    H+  + ++ +VF  G N     G     +    P+L+++L
Sbjct: 128 PRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQASPQLIKSL 187

Query: 214 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
            G+P  QV AG   +  LT+ G +   G N  GQLG  D  DR  P  +  L     +V 
Sbjct: 188 LGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLR-TQKIVY 246

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           I  G  +  A+T  G V++FG+G    LGH     E+ PR +  F   G  V +++ G +
Sbjct: 247 ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQ 304

Query: 334 HVVA-LDSSGYVYTWGKGYCGALGHGDEIDKTLP 366
           H  A + SSG +Y++G G  G LG G   ++  P
Sbjct: 305 HTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 77/251 (30%), Positives = 119/251 (47%), Gaps = 17/251 (6%)

Query: 70  IYA-GMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLISN 128
           +YA G+  + Q+ LL       +  +R  ++++  SDI       +Q+  G YH+L +S 
Sbjct: 105 VYAWGLDSDGQLGLLGS-----EECIRVPRNIKSLSDI-----QIVQVACGYYHSLALSK 154

Query: 129 SS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTC 187
           +S VF  G +  G LG G +  +  S   I        +QV+A   H+  +  SG +F  
Sbjct: 155 ASEVFCWGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGW 214

Query: 188 GDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQ 247
           G N     G  D N   + P L+++L+      +  G + T  LT  G V T G+  +GQ
Sbjct: 215 GRNKFGQLGLNDENDR-YVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQ 273

Query: 248 LGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVVYSFGSGSNFCLGHGE 305
           LGH  T     P+ +   E +GS+V QIA G  +  A V  +G +YSFG G N  LG G 
Sbjct: 274 LGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGS 331

Query: 306 QHDELQPRAIQ 316
             +   P  ++
Sbjct: 332 TSNRKSPFTVK 342


>gi|27923073|gb|AAO27475.1| HERC2 [Homo sapiens]
          Length = 328

 Score =  125 bits (315), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 90/319 (28%), Positives = 154/319 (48%), Gaps = 16/319 (5%)

Query: 155 TRINFPS------AAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPR 208
           ++I  PS      A +VVQV+        V   G+V+ CG+ ++   G   ++  +  PR
Sbjct: 16  SKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPR 75

Query: 209 LVEALKGVPCKQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 266
            + AL     K+V   +G      LT+ G V   G    G+LGH   ++   P+ I  L+
Sbjct: 76  QITALSSYVVKKVAVHSGGRHATALTVDGKVFWWGEGDDGKLGHFSRMNCDKPRLIEALK 135

Query: 267 EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVV 326
               +  IA G S+  A+T +G +Y++G G    LGHG+   +L+P+ ++     G  V+
Sbjct: 136 -TKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLL--GHRVI 192

Query: 327 RVSAG--DEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARK 384
           +V+ G  D   +AL   G V++WG G  G LG G      +P+ +  L      Q+    
Sbjct: 193 QVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGA 252

Query: 385 RKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV 444
           + +  L  +G V+ +G   +  LG    G    V +P++++ LR   +  ++ G  H + 
Sbjct: 253 QFSLALTKSGVVWTWGKGDYFRLG---HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLA 309

Query: 445 VTDRGRLFGFGDNERAQLG 463
           VTD G+++ +GDN+  Q G
Sbjct: 310 VTDSGQVYAWGDNDHGQQG 328



 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 86/262 (32%), Positives = 130/262 (49%), Gaps = 9/262 (3%)

Query: 207 PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHG-DTLDRPTPKSIAPL 265
           P   E L  +   QV  G      +T+ G V+ CG  T+G+LG G  +   P P+ I  L
Sbjct: 21  PSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITAL 80

Query: 266 EE-VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH 324
              V   V + +G  +  A+T +G V+ +G G +  LGH  + +  +PR I+  + K I 
Sbjct: 81  SSYVVKKVAVHSGGRHATALTVDGKVFWWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIR 140

Query: 325 VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVC--A 382
              ++ G  H  AL SSG +YTWG G  G LGHGD   +  P+ +  L  H  +QV   +
Sbjct: 141 --DIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGS 198

Query: 383 RKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHT 442
           R  +T  L D G V+ +G   FG LG   RG S+    P+ ++ L    V QI  G   +
Sbjct: 199 RDAQTLALTDEGLVFSWGDGDFGKLG---RGGSEGCNIPQNIERLNGQGVCQIECGAQFS 255

Query: 443 VVVTDRGRLFGFGDNERAQLGH 464
           + +T  G ++ +G  +  +LGH
Sbjct: 256 LALTKSGVVWTWGKGDYFRLGH 277



 Score = 96.3 bits (238), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 75/232 (32%), Positives = 109/232 (46%), Gaps = 7/232 (3%)

Query: 119 GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
           GR+ T L  +  VF  G    G LGH      C     I       +  ++   +H+A +
Sbjct: 94  GRHATALTVDGKVFWWGEGDDGKLGH-FSRMNCDKPRLIEALKTKRIRDIACGSSHSAAL 152

Query: 179 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN--FTGFLTIRGH 236
             SG+++T G       GH D N    +P++V+ L G    QV  G     T  LT  G 
Sbjct: 153 TSSGELYTWGLGEYGRLGHGD-NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 211

Query: 237 VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 296
           V + G    G+LG G +     P++I  L   G V QI  G  + LA+T +GVV+++G G
Sbjct: 212 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTWGKG 270

Query: 297 SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 348
             F LGHG      +P+ ++  R K   +V V+ G  H +A+  SG VY WG
Sbjct: 271 DYFRLGHGSDVHVRKPQVVEGLRGK--KIVHVAVGALHCLAVTDSGQVYAWG 320



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 73/242 (30%), Positives = 112/242 (46%), Gaps = 13/242 (5%)

Query: 241 GSNTHGQLG--HGDTLDRPT-PKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 297
           G N   QLG   G  +  P+  ++++ L    +VVQ+A G   + AVT  G VY+ G  +
Sbjct: 3   GLNDKDQLGGLKGSKIKVPSFSETLSAL----NVVQVAGGSKSLFAVTVEGKVYACGEAT 58

Query: 298 NFCLGHGEQHDELQ-PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 356
           N  LG G     +  PR I       +  V V +G  H  AL   G V+ WG+G  G LG
Sbjct: 59  NGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFWWGEGDDGKLG 118

Query: 357 HGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSD 416
           H   ++   P  + +LK+     +      +  L  +G +Y +G   +G LG  D     
Sbjct: 119 HFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQ- 177

Query: 417 KVLRPRILDSLRAHHVSQISTGL--YHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPT 474
             L+P+++  L  H V Q++ G     T+ +TD G +F +GD +  +LG     GC  P 
Sbjct: 178 --LKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQ 235

Query: 475 EI 476
            I
Sbjct: 236 NI 237



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 58/194 (29%), Positives = 86/194 (44%), Gaps = 11/194 (5%)

Query: 116 ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           I  G  H+  L S+  +++ G    G LGHG  TTQ +    +       V+QV+     
Sbjct: 142 IACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQ-LKPKMVKVLLGHRVIQVACGSRD 200

Query: 175 AA--FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
           A    +   G VF+ GD      G R  +     P+ +E L G    Q+  G  F+  LT
Sbjct: 201 AQTLALTDEGLVFSWGDGDFGKLG-RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALT 259

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
             G V T G   + +LGHG  +    P+ +  L     +V +A G  + LAVT +G VY+
Sbjct: 260 KSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGK-KIVHVAVGALHCLAVTDSGQVYA 318

Query: 293 FGSGSNFCLGHGEQ 306
           +G        HG+Q
Sbjct: 319 WGDND-----HGQQ 327


>gi|410900470|ref|XP_003963719.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like
           [Takifugu rubripes]
          Length = 1042

 Score =  125 bits (315), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 91/278 (32%), Positives = 139/278 (50%), Gaps = 14/278 (5%)

Query: 204 IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 263
           +  PR  E   G     V  GL  T FL   G V+TCG N  GQLGH     R  P+ + 
Sbjct: 22  VIEPRKCEFFHGKKVCDVGCGLKHTVFLLDDGTVYTCGCNDLGQLGHEKP--RKKPEHVV 79

Query: 264 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQ-PRAIQTFRRKG 322
            L+    +V ++ G S+ LA+   G ++S+G GS+  LG     + ++ PR I+      
Sbjct: 80  ALD-AQIIVAVSGGESHTLALNDKGQIFSWGLGSDGQLGLNNFEECVRVPRNIKCL--SD 136

Query: 323 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG---HGDEIDKTLPEPLSSLKSHLAVQ 379
           + + +V+ G  H  AL   G V++WG+   G LG   HG  I  + P+ + SL+     Q
Sbjct: 137 VQIAQVACGYRHSHALSKGGQVFSWGQNQFGQLGLGMHGSSI--STPQIIQSLQGIPFAQ 194

Query: 380 VCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGL 439
           + A    +F +  +G+V+G+G   FG LG  D   +D+   P +L SLR+  V  +S G 
Sbjct: 195 LSAGGAHSFAITLSGAVFGWGRNKFGQLGLND--TNDRWF-PALLKSLRSQRVIYVSCGE 251

Query: 440 YHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF 477
            HT  +T  G +F FG     QLGH++    + P ++F
Sbjct: 252 DHTAALTKEGGVFTFGAGGYGQLGHNSTNHEINPRKVF 289



 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 104/333 (31%), Positives = 154/333 (46%), Gaps = 13/333 (3%)

Query: 135 GSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSF 193
           G++  G LG G    + V   R   F     V  V     H  F+L  G V+TCG N   
Sbjct: 5   GNASYGQLGLGGIDEEIVIEPRKCEFFHGKKVCDVGCGLKHTVFLLDDGTVYTCGCNDLG 64

Query: 194 CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDT 253
             GH    +P  +P  V AL       V+ G + T  L  +G + + G  + GQLG  + 
Sbjct: 65  QLGHE---KPRKKPEHVVALDAQIIVAVSGGESHTLALNDKGQIFSWGLGSDGQLGLNNF 121

Query: 254 LD-RPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQ- 311
            +    P++I  L +V  + Q+A G  +  A++  G V+S+G      LG G     +  
Sbjct: 122 EECVRVPRNIKCLSDV-QIAQVACGYRHSHALSKGGQVFSWGQNQFGQLGLGMHGSSIST 180

Query: 312 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSS 371
           P+ IQ+   +GI   ++SAG  H  A+  SG V+ WG+   G LG  D  D+  P  L S
Sbjct: 181 PQIIQSL--QGIPFAQLSAGGAHSFAITLSGAVFGWGRNKFGQLGLNDTNDRWFPALLKS 238

Query: 372 LKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHH 431
           L+S   + V   +  T  L   G V+ FG  G+G LG      ++  + PR +  L  + 
Sbjct: 239 LRSQRVIYVSCGEDHTAALTKEGGVFTFGAGGYGQLG---HNSTNHEINPRKVFELMGNI 295

Query: 432 VSQISTGLYHTVVVT-DRGRLFGFGDNERAQLG 463
           V+QIS G  HT+  T   G+++ FG     QLG
Sbjct: 296 VTQISCGRQHTLAFTPSSGKMYSFGLGGNGQLG 328



 Score =  112 bits (281), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 87/295 (29%), Positives = 141/295 (47%), Gaps = 13/295 (4%)

Query: 119 GRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAF 177
           G  HT+ L+ + +V++CG +  G LGH     +      ++   A  +V VS  E+H   
Sbjct: 42  GLKHTVFLLDDGTVYTCGCNDLGQLGHEKPRKKPEHVVALD---AQIIVAVSGGESHTLA 98

Query: 178 VLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHV 237
           +   GQ+F+ G  S    G  +    +  PR ++ L  V   QV  G   +  L+  G V
Sbjct: 99  LNDKGQIFSWGLGSDGQLGLNNFEECVRVPRNIKCLSDVQIAQVACGYRHSHALSKGGQV 158

Query: 238 HTCGSNTHGQLG---HGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 294
            + G N  GQLG   HG ++   TP+ I  L+ +    Q++AG ++  A+T +G V+ +G
Sbjct: 159 FSWGQNQFGQLGLGMHGSSIS--TPQIIQSLQGI-PFAQLSAGGAHSFAITLSGAVFGWG 215

Query: 295 SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGA 354
                 LG  + +D   P  +++ R +   V+ VS G++H  AL   G V+T+G G  G 
Sbjct: 216 RNKFGQLGLNDTNDRWFPALLKSLRSQ--RVIYVSCGEDHTAALTKEGGVFTFGAGGYGQ 273

Query: 355 LGHGDEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLG 408
           LGH     +  P  +  L  ++  Q+ C R+        +G +Y FG  G G LG
Sbjct: 274 LGHNSTNHEINPRKVFELMGNIVTQISCGRQHTLAFTPSSGKMYSFGLGGNGQLG 328



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 81/258 (31%), Positives = 128/258 (49%), Gaps = 7/258 (2%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSASEN 173
           ++ G  HTL +++   +FS G    G LG      +CV   R I   S   + QV+    
Sbjct: 89  VSGGESHTLALNDKGQIFSWGLGSDGQLGLN-NFEECVRVPRNIKCLSDVQIAQVACGYR 147

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
           H+  + + GQVF+ G N     G       I  P+++++L+G+P  Q++AG   +  +T+
Sbjct: 148 HSHALSKGGQVFSWGQNQFGQLGLGMHGSSISTPQIIQSLQGIPFAQLSAGGAHSFAITL 207

Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
            G V   G N  GQLG  DT DR  P  +  L     V+ ++ G  +  A+T  G V++F
Sbjct: 208 SGAVFGWGRNKFGQLGLNDTNDRWFPALLKSLRS-QRVIYVSCGEDHTAALTKEGGVFTF 266

Query: 294 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL-DSSGYVYTWGKGYC 352
           G+G    LGH   + E+ PR +  F   G  V ++S G +H +A   SSG +Y++G G  
Sbjct: 267 GAGGYGQLGHNSTNHEINPRKV--FELMGNIVTQISCGRQHTLAFTPSSGKMYSFGLGGN 324

Query: 353 GALGHGDEIDKTLPEPLS 370
           G LG     ++  P P+ 
Sbjct: 325 GQLGTRSTCNRKSPAPVK 342



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 51/168 (30%), Positives = 73/168 (43%), Gaps = 24/168 (14%)

Query: 115 QITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPS------AAHVVQ 167
           Q++ G  H+  I+ S +VF  G +  G LG      +        FP+      +  V+ 
Sbjct: 194 QLSAGGAHSFAITLSGAVFGWGRNKFGQLGLNDTNDRW-------FPALLKSLRSQRVIY 246

Query: 168 VSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF 227
           VS  E+H A + + G VFT G       GH  TN  I  PR V  L G    Q++ G   
Sbjct: 247 VSCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTNHEI-NPRKVFELMGNIVTQISCGRQH 305

Query: 228 T-GFLTIRGHVHTCGSNTHGQLGHGDTLDRPTP--------KSIAPLE 266
           T  F    G +++ G   +GQLG   T +R +P         S AP+E
Sbjct: 306 TLAFTPSSGKMYSFGLGGNGQLGTRSTCNRKSPAPVKGPFVASAAPIE 353


>gi|301755908|ref|XP_002913790.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
           3 [Ailuropoda melanoleuca]
          Length = 1054

 Score =  125 bits (315), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 89/276 (32%), Positives = 140/276 (50%), Gaps = 10/276 (3%)

Query: 204 IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 263
           +  PR  +       + V  GL  T F+   G V+TCG N  GQLGH  +  R  P+ + 
Sbjct: 22  VLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKS--RKKPEQVV 79

Query: 264 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH-GEQHDELQPRAIQTFRRKG 322
            L+   ++V ++ G ++ LA+   G VY++G  S+  LG  G +     PR I++     
Sbjct: 80  ALD-AQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSL--SD 136

Query: 323 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTL-PEPLSSLKSHLAVQVC 381
           I +V+V+ G  H +AL  +  V+ WG+   G LG G +  K   P+ + SL     +QV 
Sbjct: 137 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQVA 196

Query: 382 ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYH 441
           A    +FVL  +G+++G+G   FG LG  D   +D+ + P +L SLR   +  I  G  H
Sbjct: 197 AGGAHSFVLTLSGAIFGWGRNKFGQLGLNDE--NDRYV-PNLLKSLRTQKIVYICCGEDH 253

Query: 442 TVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF 477
           T  +T  G +F FG     QLGH++    + P ++F
Sbjct: 254 TAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVF 289



 Score =  122 bits (307), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 104/333 (31%), Positives = 154/333 (46%), Gaps = 13/333 (3%)

Query: 135 GSSLCGVLGHGPETTQCVSFTRI-NFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSF 193
           G++  G LG G    + V   R  +F     V  V     H  FVL  G V+TCG N   
Sbjct: 5   GNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLG 64

Query: 194 CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGH-GD 252
             GH  + +   +P  V AL       V+ G   T  L  +G V+  G ++ GQLG  G 
Sbjct: 65  QLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGS 121

Query: 253 TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHG-EQHDELQ 311
                 P++I  L ++  +VQ+A G  + LA++    V+ +G      LG G +   +  
Sbjct: 122 EECIRVPRNIKSLSDI-QIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQAS 180

Query: 312 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSS 371
           P+ I++    GI  ++V+AG  H   L  SG ++ WG+   G LG  DE D+ +P  L S
Sbjct: 181 PQLIKSLL--GIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKS 238

Query: 372 LKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHH 431
           L++   V +C  +  T  L   G V+ FG  G+G LG      +   + PR +  L    
Sbjct: 239 LRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG---HNSTSHEINPRKVFELMGSI 295

Query: 432 VSQISTGLYHT-VVVTDRGRLFGFGDNERAQLG 463
           V+QI+ G  HT   V   GR++ FG     QLG
Sbjct: 296 VTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 80/291 (27%), Positives = 138/291 (47%), Gaps = 8/291 (2%)

Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 179
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V VS  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVSCGEAHTLALN 100

Query: 180 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 239
             GQV+  G +S    G   +   I  PR +++L  +   QV  G   +  L+    V  
Sbjct: 101 DKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFC 160

Query: 240 CGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
            G N +GQLG G D   + +P+ I  L  +   +Q+AAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKYGQLGLGIDCKKQASPQLIKSLLGI-PFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 299 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 358
             LG  +++D   P  +++ R + I  V +  G++H  AL   G V+T+G G  G LGH 
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRTQKI--VYICCGEDHTAALTKEGGVFTFGAGGYGQLGHN 277

Query: 359 DEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLG 408
               +  P  +  L   +  Q+ C R+  +  +  +G +Y FG  G G LG
Sbjct: 278 STSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  101 bits (251), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 84/274 (30%), Positives = 132/274 (48%), Gaps = 10/274 (3%)

Query: 98  QSVEHSSDIVETSAGNM-QITTGRYHTLLISNS-SVFSCGSSLCGVLGH-GPETTQCVSF 154
           +S +    +V   A N+  ++ G  HTL +++   V++ G    G LG  G E  +C+  
Sbjct: 70  KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSE--ECIRV 127

Query: 155 TR-INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEAL 213
            R I   S   +VQV+    H+  + ++ +VF  G N     G     +    P+L+++L
Sbjct: 128 PRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQASPQLIKSL 187

Query: 214 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
            G+P  QV AG   +  LT+ G +   G N  GQLG  D  DR  P  +  L     +V 
Sbjct: 188 LGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLR-TQKIVY 246

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           I  G  +  A+T  G V++FG+G    LGH     E+ PR +  F   G  V +++ G +
Sbjct: 247 ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQ 304

Query: 334 HVVA-LDSSGYVYTWGKGYCGALGHGDEIDKTLP 366
           H  A + SSG +Y++G G  G LG G   ++  P
Sbjct: 305 HTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 77/251 (30%), Positives = 119/251 (47%), Gaps = 17/251 (6%)

Query: 70  IYA-GMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLISN 128
           +YA G+  + Q+ LL       +  +R  ++++  SDI       +Q+  G YH+L +S 
Sbjct: 105 VYAWGLDSDGQLGLLGS-----EECIRVPRNIKSLSDI-----QIVQVACGYYHSLALSK 154

Query: 129 SS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTC 187
           +S VF  G +  G LG G +  +  S   I        +QV+A   H+  +  SG +F  
Sbjct: 155 ASEVFCWGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGW 214

Query: 188 GDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQ 247
           G N     G  D N   + P L+++L+      +  G + T  LT  G V T G+  +GQ
Sbjct: 215 GRNKFGQLGLNDENDR-YVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQ 273

Query: 248 LGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVVYSFGSGSNFCLGHGE 305
           LGH  T     P+ +   E +GS+V QIA G  +  A V  +G +YSFG G N  LG G 
Sbjct: 274 LGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGS 331

Query: 306 QHDELQPRAIQ 316
             +   P  ++
Sbjct: 332 TSNRKSPFTVK 342


>gi|73952751|ref|XP_860006.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 9
           [Canis lupus familiaris]
          Length = 1054

 Score =  125 bits (315), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 89/276 (32%), Positives = 139/276 (50%), Gaps = 10/276 (3%)

Query: 204 IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 263
           +  PR  +       + V  GL  T F+   G V+TCG N  GQLGH  +  R  P+ + 
Sbjct: 22  VLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKS--RKKPEQVV 79

Query: 264 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH-GEQHDELQPRAIQTFRRKG 322
            L+   ++V ++ G ++ LA+   G VY++G  S+  LG  G +     PR I++     
Sbjct: 80  ALD-AQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSL--SD 136

Query: 323 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTL-PEPLSSLKSHLAVQVC 381
           I +V+V+ G  H +AL   G  + WG+   G LG G +  K   P+ + SL     +QV 
Sbjct: 137 IQIVQVACGYYHSLALSKEGEFFCWGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQVA 196

Query: 382 ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYH 441
           A    +FVL  +G+++G+G   FG LG  D   +D+ + P +L SLR   +  I  G  H
Sbjct: 197 AGGAHSFVLTLSGAIFGWGRNKFGQLGLNDE--NDRYV-PNLLKSLRTQKIVYICCGEDH 253

Query: 442 TVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF 477
           T  +T  G +F FG     QLGH++    + P ++F
Sbjct: 254 TAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVF 289



 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 104/333 (31%), Positives = 154/333 (46%), Gaps = 13/333 (3%)

Query: 135 GSSLCGVLGHGPETTQCVSFTRI-NFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSF 193
           G++  G LG G    + V   R  +F     V  V     H  FVL  G V+TCG N   
Sbjct: 5   GNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLG 64

Query: 194 CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGH-GD 252
             GH  + +   +P  V AL       V+ G   T  L  +G V+  G ++ GQLG  G 
Sbjct: 65  QLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGS 121

Query: 253 TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHG-EQHDELQ 311
                 P++I  L ++  +VQ+A G  + LA++  G  + +G      LG G +   +  
Sbjct: 122 EECIRVPRNIKSLSDI-QIVQVACGYYHSLALSKEGEFFCWGQNKYGQLGLGIDCKKQAS 180

Query: 312 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSS 371
           P+ I++    GI  ++V+AG  H   L  SG ++ WG+   G LG  DE D+ +P  L S
Sbjct: 181 PQLIKSLL--GIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKS 238

Query: 372 LKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHH 431
           L++   V +C  +  T  L   G V+ FG  G+G LG      +   + PR +  L    
Sbjct: 239 LRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG---HNSTSHEINPRKVFELMGSI 295

Query: 432 VSQISTGLYHT-VVVTDRGRLFGFGDNERAQLG 463
           V+QI+ G  HT   V   GR++ FG     QLG
Sbjct: 296 VTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  111 bits (277), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 80/291 (27%), Positives = 138/291 (47%), Gaps = 8/291 (2%)

Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 179
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V VS  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVSCGEAHTLALN 100

Query: 180 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 239
             GQV+  G +S    G   +   I  PR +++L  +   QV  G   +  L+  G    
Sbjct: 101 DKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKEGEFFC 160

Query: 240 CGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
            G N +GQLG G D   + +P+ I  L  +   +Q+AAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKYGQLGLGIDCKKQASPQLIKSLLGI-PFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 299 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 358
             LG  +++D   P  +++ R + I  V +  G++H  AL   G V+T+G G  G LGH 
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRTQKI--VYICCGEDHTAALTKEGGVFTFGAGGYGQLGHN 277

Query: 359 DEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLG 408
               +  P  +  L   +  Q+ C R+  +  +  +G +Y FG  G G LG
Sbjct: 278 STSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  101 bits (251), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 84/274 (30%), Positives = 131/274 (47%), Gaps = 10/274 (3%)

Query: 98  QSVEHSSDIVETSAGNM-QITTGRYHTLLISNS-SVFSCGSSLCGVLGH-GPETTQCVSF 154
           +S +    +V   A N+  ++ G  HTL +++   V++ G    G LG  G E  +C+  
Sbjct: 70  KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSE--ECIRV 127

Query: 155 TR-INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEAL 213
            R I   S   +VQV+    H+  + + G+ F  G N     G     +    P+L+++L
Sbjct: 128 PRNIKSLSDIQIVQVACGYYHSLALSKEGEFFCWGQNKYGQLGLGIDCKKQASPQLIKSL 187

Query: 214 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
            G+P  QV AG   +  LT+ G +   G N  GQLG  D  DR  P  +  L     +V 
Sbjct: 188 LGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLR-TQKIVY 246

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           I  G  +  A+T  G V++FG+G    LGH     E+ PR +  F   G  V +++ G +
Sbjct: 247 ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQ 304

Query: 334 HVVA-LDSSGYVYTWGKGYCGALGHGDEIDKTLP 366
           H  A + SSG +Y++G G  G LG G   ++  P
Sbjct: 305 HTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338



 Score = 79.0 bits (193), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 76/251 (30%), Positives = 117/251 (46%), Gaps = 17/251 (6%)

Query: 70  IYA-GMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLISN 128
           +YA G+  + Q+ LL       +  +R  ++++  SDI       +Q+  G YH+L +S 
Sbjct: 105 VYAWGLDSDGQLGLLGS-----EECIRVPRNIKSLSDI-----QIVQVACGYYHSLALSK 154

Query: 129 SSVFSC-GSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTC 187
              F C G +  G LG G +  +  S   I        +QV+A   H+  +  SG +F  
Sbjct: 155 EGEFFCWGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGW 214

Query: 188 GDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQ 247
           G N     G  D N   + P L+++L+      +  G + T  LT  G V T G+  +GQ
Sbjct: 215 GRNKFGQLGLNDENDR-YVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQ 273

Query: 248 LGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVVYSFGSGSNFCLGHGE 305
           LGH  T     P+ +   E +GS+V QIA G  +  A V  +G +YSFG G N  LG G 
Sbjct: 274 LGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGS 331

Query: 306 QHDELQPRAIQ 316
             +   P  ++
Sbjct: 332 TSNRKSPFTVK 342


>gi|395822793|ref|XP_003784693.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Otolemur
            garnettii]
          Length = 4828

 Score =  125 bits (315), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 101/339 (29%), Positives = 166/339 (48%), Gaps = 17/339 (5%)

Query: 115  QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQV---SA 170
            Q+  G+  T +I +N +V +CG    G LG G      V  T I+      V Q+     
Sbjct: 3998 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHV-LTVISALQGFVVTQLVTSCG 4056

Query: 171  SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
            S+ H+  + +SG+VF+ GD      GH +++R   RPR +EAL+G    Q++ G   +  
Sbjct: 4057 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQMSCGFKHSAV 4115

Query: 231  LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSVVQIAAGPSYMLAVTGNG 288
            +T  G + T G+  +G+LG G+T ++  P+ +  LE  ++G   Q+A G ++ LAV+ +G
Sbjct: 4116 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIG---QVACGLNHTLAVSADG 4172

Query: 289  -VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 347
             +V++FG G    LG G    +  P+ +      GI + +V+ G +  VAL   G+VYT+
Sbjct: 4173 SMVWAFGDGDYGKLGLGNSTAKSSPQKVDVL--CGIGIKKVACGTQFSVALTKDGHVYTF 4230

Query: 348  GKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSL 407
            G+     L  G   +   P+ +  L   +   V      T  L   G VY +G    G L
Sbjct: 4231 GQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASNGDVYAWGSNSEGQL 4290

Query: 408  GFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT 446
            G    G ++ V  P ++  L+  ++ QIS G  H+   T
Sbjct: 4291 GL---GHTNHVREPTLVTVLQGKNIRQISAGRCHSAAWT 4326



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 106/379 (27%), Positives = 165/379 (43%), Gaps = 29/379 (7%)

Query: 96  FLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFT 155
           F +    +SD   T A    I TG    ++     V+  GS+    L  G   TQ     
Sbjct: 340 FEEVCRMASDYSRTCASPDSIQTGDA-PIVSETCEVYVWGSNSSHQLVEG---TQEKILQ 395

Query: 156 RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTN------RPIFRPRL 209
               PS +    + A +     +   G V  CG  S    G  D+N      +  F P  
Sbjct: 396 PKLAPSFSDAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPH- 454

Query: 210 VEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG 269
             ++K V   + + G   T   T  G V + G   +G+LGHG++  +  PK I    +  
Sbjct: 455 -RSIKKVSSSKGSDG--HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGK 511

Query: 270 SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS 329
            VV ++AG  +  AVT +G +Y++G G    LGHG+ +     R I T  +   +V  VS
Sbjct: 512 VVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNS----RNIPTLVKDISNVGEVS 567

Query: 330 AGDEHVVALDSSGY-VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTF 388
            G  H +AL   G  V+++G G  G LGHGD      P+ + +L+     +VCA  + + 
Sbjct: 568 CGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSL 627

Query: 389 VLVDTGSVYGFG---WMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVV 445
            L  TG VY +G    +G GS            LRP++++ L A  +  IS G  H + +
Sbjct: 628 ALTSTGQVYAWGCGACLGCGS-------SEATALRPKLIEELAATRIVDISIGDSHCLAL 680

Query: 446 TDRGRLFGFGDNERAQLGH 464
           +    ++ +G+N   Q G 
Sbjct: 681 SHDNEVYAWGNNSMGQCGQ 699



 Score = 98.2 bits (243), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 92/267 (34%), Positives = 130/267 (48%), Gaps = 16/267 (5%)

Query: 122 HTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ-VSASENHAAFVL 179
           HTL   +   VFS G    G LGHG  +TQ      I  P    VV  VSA   H+A V 
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYP-KLIQGPLQGKVVVCVSAGYRHSAAVT 527

Query: 180 QSGQVFTCGDNSSFCCGHRDTN-RPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH-V 237
           + G+++T G+      GH D+N R I  P LV+ +  V   +V+ G + T  L+  G  V
Sbjct: 528 EDGELYTWGEGDFGRLGHGDSNSRNI--PTLVKDISNV--GEVSCGSSHTIALSKDGRTV 583

Query: 238 HTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 297
            + G   +G+LGHGDT     PK I  L+ +  + ++ AG    LA+T  G VY++G G+
Sbjct: 584 WSFGGGDNGKLGHGDTNRVYKPKVIEALQGM-FIRKVCAGSQSSLALTSTGQVYAWGCGA 642

Query: 298 NFCLGHG-EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 356
             CLG G  +   L+P+ I+        +V +S GD H +AL     VY WG    G  G
Sbjct: 643 --CLGCGSSEATALRPKLIEEL--AATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCG 698

Query: 357 HGDEIDK-TLPEPLSSLKSHLAVQVCA 382
            G+     T P+ +S L      Q+ A
Sbjct: 699 QGNSTGPITKPKKVSGLDGIAIQQISA 725



 Score = 97.4 bits (241), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 87/324 (26%), Positives = 150/324 (46%), Gaps = 13/324 (4%)

Query: 160  PSAAHVVQVSASENHAAFVLQS-GQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPC 218
            PS +   QV   +N   FV+Q+ G V  CG+ S    G  +++  +    ++ AL+G   
Sbjct: 3991 PSFSQAQQVICGQN-CTFVIQANGTVLACGEGSYGRLGQGNSDD-LHVLTVISALQGFVV 4048

Query: 219  KQVTAGLNFTGF---LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA 275
             Q+       G    LT  G V + G   +G+LGHG++  +  P+ I  L+    VVQ++
Sbjct: 4049 TQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQG-EEVVQMS 4107

Query: 276  AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHV 335
             G  +   VT +G +++FG+G    LG G   ++  P  +     +G  + +V+ G  H 
Sbjct: 4108 CGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTAL--EGYQIGQVACGLNHT 4165

Query: 336  VALDSSG-YVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 394
            +A+ + G  V+ +G G  G LG G+   K+ P+ +  L      +V    + +  L   G
Sbjct: 4166 LAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDG 4225

Query: 395  SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 454
             VY FG      +G P+ G +    RP+ +  L    +  ++ G  HT+ +   G ++ +
Sbjct: 4226 HVYTFGQDRL--IGLPE-GRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASNGDVYAW 4282

Query: 455  GDNERAQLGHDTLRGCLEPTEIFI 478
            G N   QLG        EPT + +
Sbjct: 4283 GSNSEGQLGLGHTNHVREPTLVTV 4306



 Score = 84.7 bits (208), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 68/230 (29%), Positives = 108/230 (46%), Gaps = 11/230 (4%)

Query: 237  VHTCGSNTHGQLGH-GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 295
            V+  G+  HGQL   G  +  P   + AP        Q+  G +    +  NG V + G 
Sbjct: 3966 VYLWGAGRHGQLAEAGRNVMVP---AAAP--SFSQAQQVICGQNCTFVIQANGTVLACGE 4020

Query: 296  GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG-DEHVVALDSSGYVYTWGKGYCGA 354
            GS   LG G   D      I   +   +  +  S G D H +AL  SG V++WG G  G 
Sbjct: 4021 GSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGK 4080

Query: 355  LGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGV 414
            LGHG+   +  P  + +L+    VQ+    + + V+   G ++ FG   +G LG  +   
Sbjct: 4081 LGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN--T 4138

Query: 415  SDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRL-FGFGDNERAQLG 463
            S+K L P  + +L  + + Q++ GL HT+ V+  G + + FGD +  +LG
Sbjct: 4139 SNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLG 4187



 Score = 48.9 bits (115), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 41/143 (28%), Positives = 67/143 (46%), Gaps = 9/143 (6%)

Query: 344  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 403
            VY WG G  G L    E  + +  P ++     A QV   +  TFV+   G+V   G   
Sbjct: 3966 VYLWGAGRHGQLA---EAGRNVMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGS 4022

Query: 404  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLY---HTVVVTDRGRLFGFGDNERA 460
            +G LG   +G SD +    ++ +L+   V+Q+ T      H++ +T+ G +F +GD +  
Sbjct: 4023 YGRLG---QGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYG 4079

Query: 461  QLGHDTLRGCLEPTEIFIQEMEE 483
            +LGH        P +I   + EE
Sbjct: 4080 KLGHGNSDRQRRPRQIEALQGEE 4102



 Score = 48.9 bits (115), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 28/100 (28%), Positives = 48/100 (48%), Gaps = 2/100 (2%)

Query: 125 LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQV 184
           L S   V++ G   C  LG G      +    I   +A  +V +S  ++H   +    +V
Sbjct: 629 LTSTGQVYAWGCGAC--LGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEV 686

Query: 185 FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           +  G+NS   CG  ++  PI +P+ V  L G+  +Q++AG
Sbjct: 687 YAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAG 726


>gi|73952739|ref|XP_849808.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
           [Canis lupus familiaris]
          Length = 1057

 Score =  125 bits (315), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 89/276 (32%), Positives = 140/276 (50%), Gaps = 10/276 (3%)

Query: 204 IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 263
           +  PR  +       + V  GL  T F+   G V+TCG N  GQLGH  +  R  P+ + 
Sbjct: 22  VLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKS--RKKPEQVV 79

Query: 264 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH-GEQHDELQPRAIQTFRRKG 322
            L+   ++V ++ G ++ LA+   G VY++G  S+  LG  G +     PR I++     
Sbjct: 80  ALD-AQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSL--SD 136

Query: 323 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTL-PEPLSSLKSHLAVQVC 381
           I +V+V+ G  H +AL  +  V+ WG+   G LG G +  K   P+ + SL     +QV 
Sbjct: 137 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQVA 196

Query: 382 ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYH 441
           A    +FVL  +G+++G+G   FG LG  D   +D+ + P +L SLR   +  I  G  H
Sbjct: 197 AGGAHSFVLTLSGAIFGWGRNKFGQLGLNDE--NDRYV-PNLLKSLRTQKIVYICCGEDH 253

Query: 442 TVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF 477
           T  +T  G +F FG     QLGH++    + P ++F
Sbjct: 254 TAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVF 289



 Score =  122 bits (307), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 104/333 (31%), Positives = 154/333 (46%), Gaps = 13/333 (3%)

Query: 135 GSSLCGVLGHGPETTQCVSFTRI-NFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSF 193
           G++  G LG G    + V   R  +F     V  V     H  FVL  G V+TCG N   
Sbjct: 5   GNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLG 64

Query: 194 CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGH-GD 252
             GH  + +   +P  V AL       V+ G   T  L  +G V+  G ++ GQLG  G 
Sbjct: 65  QLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGS 121

Query: 253 TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHG-EQHDELQ 311
                 P++I  L ++  +VQ+A G  + LA++    V+ +G      LG G +   +  
Sbjct: 122 EECIRVPRNIKSLSDI-QIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQAS 180

Query: 312 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSS 371
           P+ I++    GI  ++V+AG  H   L  SG ++ WG+   G LG  DE D+ +P  L S
Sbjct: 181 PQLIKSLL--GIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKS 238

Query: 372 LKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHH 431
           L++   V +C  +  T  L   G V+ FG  G+G LG      +   + PR +  L    
Sbjct: 239 LRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG---HNSTSHEINPRKVFELMGSI 295

Query: 432 VSQISTGLYHT-VVVTDRGRLFGFGDNERAQLG 463
           V+QI+ G  HT   V   GR++ FG     QLG
Sbjct: 296 VTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 80/291 (27%), Positives = 138/291 (47%), Gaps = 8/291 (2%)

Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 179
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V VS  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVSCGEAHTLALN 100

Query: 180 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 239
             GQV+  G +S    G   +   I  PR +++L  +   QV  G   +  L+    V  
Sbjct: 101 DKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFC 160

Query: 240 CGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
            G N +GQLG G D   + +P+ I  L  +   +Q+AAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKYGQLGLGIDCKKQASPQLIKSLLGI-PFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 299 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 358
             LG  +++D   P  +++ R + I  V +  G++H  AL   G V+T+G G  G LGH 
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRTQKI--VYICCGEDHTAALTKEGGVFTFGAGGYGQLGHN 277

Query: 359 DEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLG 408
               +  P  +  L   +  Q+ C R+  +  +  +G +Y FG  G G LG
Sbjct: 278 STSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 84/274 (30%), Positives = 132/274 (48%), Gaps = 10/274 (3%)

Query: 98  QSVEHSSDIVETSAGNM-QITTGRYHTLLISNS-SVFSCGSSLCGVLGH-GPETTQCVSF 154
           +S +    +V   A N+  ++ G  HTL +++   V++ G    G LG  G E  +C+  
Sbjct: 70  KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSE--ECIRV 127

Query: 155 TR-INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEAL 213
            R I   S   +VQV+    H+  + ++ +VF  G N     G     +    P+L+++L
Sbjct: 128 PRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQASPQLIKSL 187

Query: 214 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
            G+P  QV AG   +  LT+ G +   G N  GQLG  D  DR  P  +  L     +V 
Sbjct: 188 LGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLR-TQKIVY 246

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           I  G  +  A+T  G V++FG+G    LGH     E+ PR +  F   G  V +++ G +
Sbjct: 247 ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQ 304

Query: 334 HVVA-LDSSGYVYTWGKGYCGALGHGDEIDKTLP 366
           H  A + SSG +Y++G G  G LG G   ++  P
Sbjct: 305 HTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 77/251 (30%), Positives = 119/251 (47%), Gaps = 17/251 (6%)

Query: 70  IYA-GMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLISN 128
           +YA G+  + Q+ LL       +  +R  ++++  SDI       +Q+  G YH+L +S 
Sbjct: 105 VYAWGLDSDGQLGLLGS-----EECIRVPRNIKSLSDI-----QIVQVACGYYHSLALSK 154

Query: 129 SS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTC 187
           +S VF  G +  G LG G +  +  S   I        +QV+A   H+  +  SG +F  
Sbjct: 155 ASEVFCWGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGW 214

Query: 188 GDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQ 247
           G N     G  D N   + P L+++L+      +  G + T  LT  G V T G+  +GQ
Sbjct: 215 GRNKFGQLGLNDENDR-YVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQ 273

Query: 248 LGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVVYSFGSGSNFCLGHGE 305
           LGH  T     P+ +   E +GS+V QIA G  +  A V  +G +YSFG G N  LG G 
Sbjct: 274 LGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGS 331

Query: 306 QHDELQPRAIQ 316
             +   P  ++
Sbjct: 332 TSNRKSPFTVK 342


>gi|390335480|ref|XP_782620.3| PREDICTED: uncharacterized protein LOC577290 [Strongylocentrotus
           purpuratus]
          Length = 861

 Score =  125 bits (315), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 107/342 (31%), Positives = 168/342 (49%), Gaps = 23/342 (6%)

Query: 116 ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINF-PSAAHVVQVSASEN 173
           I+ G  HT +++    V + G+   G LG G + T   S  R+   P  + V  V+    
Sbjct: 71  ISCGSSHTAVVTGQDEVLTWGNGNSGQLGCGDKATH-TSPQRLRLGPHDSQVAGVACGSR 129

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGH----RDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
           H    L++G+ ++CG+N     G+    ++       P  +  +      QV+ G  FT 
Sbjct: 130 HTVVWLENGRAYSCGNNFYVQLGYDFRVKNYKENQVLPHFLRPIMHRKVVQVSCGEKFTL 189

Query: 230 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 289
           FL   G V  CG+N  GQLG+G   +  +PK   PL+   +V++IAAG  + LAVT  G 
Sbjct: 190 FLFESGQVAGCGANNFGQLGNGTRAEMVSPK---PLDNPENVIRIAAGSCHSLAVTATGE 246

Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 349
           +Y++G G   C   G + D+L     +T RR   +VV V+ G  H +AL ++G VY+WG 
Sbjct: 247 LYAWGMG-RAC---GSRRDDLLTPQRKTTRRS--NVVGVAGGSGHSLALTANGTVYSWGG 300

Query: 350 GYCGALGHGDEIDK-TLPEPLS--SLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGS 406
           G  G LGHG+++     PE L+  +L   +A   C       +L D GS+Y   W     
Sbjct: 301 GVDGQLGHGEDVQYLAQPEALADGALPGRVAQVACGDSYSAALLGD-GSLY--MWGKSSH 357

Query: 407 LGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDR 448
           +   D+  S KV RP +  SL    ++ ++ G +HT  +T +
Sbjct: 358 VIQADQPSSQKVYRP-VGISLNGRSIAMVTCGSWHTAAITGK 398



 Score = 53.1 bits (126), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 46/160 (28%), Positives = 67/160 (41%), Gaps = 5/160 (3%)

Query: 325 VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPL--SSLKSHLAVQVCA 382
           V  +S G  H   +     V TWG G  G LG GD+   T P+ L      S +A   C 
Sbjct: 68  VKHISCGSSHTAVVTGQDEVLTWGNGNSGQLGCGDKATHTSPQRLRLGPHDSQVAGVACG 127

Query: 383 RKRKTFVLVDTGSVYGFGWMGFGSLGFPDR--GVSDKVLRPRILDSLRAHHVSQISTGLY 440
             R T V ++ G  Y  G   +  LG+  R     +  + P  L  +    V Q+S G  
Sbjct: 128 -SRHTVVWLENGRAYSCGNNFYVQLGYDFRVKNYKENQVLPHFLRPIMHRKVVQVSCGEK 186

Query: 441 HTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQE 480
            T+ + + G++ G G N   QLG+ T    + P  +   E
Sbjct: 187 FTLFLFESGQVAGCGANNFGQLGNGTRAEMVSPKPLDNPE 226



 Score = 38.9 bits (89), Expect = 6.5,   Method: Compositional matrix adjust.
 Identities = 39/138 (28%), Positives = 56/138 (40%), Gaps = 9/138 (6%)

Query: 335 VVALDSS-GYVYTWGKGYCGALGHGDEIDKTLPEPL------SSLKSHLAVQVCARKRKT 387
           V  LD   G + +WG G  G  GHG   +    E        S ++SH    +      T
Sbjct: 19  VTDLDQDRGLLLSWGCGEFGQHGHGGSGENVSSEGALVDHGDSLVRSHRVKHISCGSSHT 78

Query: 388 FVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTD 447
            V+     V  +G    G LG  D+       R R+        V+ ++ G  HTVV  +
Sbjct: 79  AVVTGQDEVLTWGNGNSGQLGCGDKATHTSPQRLRL--GPHDSQVAGVACGSRHTVVWLE 136

Query: 448 RGRLFGFGDNERAQLGHD 465
            GR +  G+N   QLG+D
Sbjct: 137 NGRAYSCGNNFYVQLGYD 154


>gi|73952755|ref|XP_536367.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
           [Canis lupus familiaris]
          Length = 1049

 Score =  125 bits (315), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 89/276 (32%), Positives = 140/276 (50%), Gaps = 10/276 (3%)

Query: 204 IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 263
           +  PR  +       + V  GL  T F+   G V+TCG N  GQLGH  +  R  P+ + 
Sbjct: 22  VLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKS--RKKPEQVV 79

Query: 264 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH-GEQHDELQPRAIQTFRRKG 322
            L+   ++V ++ G ++ LA+   G VY++G  S+  LG  G +     PR I++     
Sbjct: 80  ALD-AQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSL--SD 136

Query: 323 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTL-PEPLSSLKSHLAVQVC 381
           I +V+V+ G  H +AL  +  V+ WG+   G LG G +  K   P+ + SL     +QV 
Sbjct: 137 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQVA 196

Query: 382 ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYH 441
           A    +FVL  +G+++G+G   FG LG  D   +D+ + P +L SLR   +  I  G  H
Sbjct: 197 AGGAHSFVLTLSGAIFGWGRNKFGQLGLNDE--NDRYV-PNLLKSLRTQKIVYICCGEDH 253

Query: 442 TVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF 477
           T  +T  G +F FG     QLGH++    + P ++F
Sbjct: 254 TAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVF 289



 Score =  122 bits (307), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 104/333 (31%), Positives = 154/333 (46%), Gaps = 13/333 (3%)

Query: 135 GSSLCGVLGHGPETTQCVSFTRI-NFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSF 193
           G++  G LG G    + V   R  +F     V  V     H  FVL  G V+TCG N   
Sbjct: 5   GNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLG 64

Query: 194 CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGH-GD 252
             GH  + +   +P  V AL       V+ G   T  L  +G V+  G ++ GQLG  G 
Sbjct: 65  QLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGS 121

Query: 253 TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHG-EQHDELQ 311
                 P++I  L ++  +VQ+A G  + LA++    V+ +G      LG G +   +  
Sbjct: 122 EECIRVPRNIKSLSDI-QIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQAS 180

Query: 312 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSS 371
           P+ I++    GI  ++V+AG  H   L  SG ++ WG+   G LG  DE D+ +P  L S
Sbjct: 181 PQLIKSLL--GIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKS 238

Query: 372 LKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHH 431
           L++   V +C  +  T  L   G V+ FG  G+G LG      +   + PR +  L    
Sbjct: 239 LRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG---HNSTSHEINPRKVFELMGSI 295

Query: 432 VSQISTGLYHT-VVVTDRGRLFGFGDNERAQLG 463
           V+QI+ G  HT   V   GR++ FG     QLG
Sbjct: 296 VTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 80/291 (27%), Positives = 138/291 (47%), Gaps = 8/291 (2%)

Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 179
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V VS  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVSCGEAHTLALN 100

Query: 180 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 239
             GQV+  G +S    G   +   I  PR +++L  +   QV  G   +  L+    V  
Sbjct: 101 DKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFC 160

Query: 240 CGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
            G N +GQLG G D   + +P+ I  L  +   +Q+AAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKYGQLGLGIDCKKQASPQLIKSLLGI-PFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 299 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 358
             LG  +++D   P  +++ R + I  V +  G++H  AL   G V+T+G G  G LGH 
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRTQKI--VYICCGEDHTAALTKEGGVFTFGAGGYGQLGHN 277

Query: 359 DEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLG 408
               +  P  +  L   +  Q+ C R+  +  +  +G +Y FG  G G LG
Sbjct: 278 STSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 84/274 (30%), Positives = 132/274 (48%), Gaps = 10/274 (3%)

Query: 98  QSVEHSSDIVETSAGNM-QITTGRYHTLLISNS-SVFSCGSSLCGVLGH-GPETTQCVSF 154
           +S +    +V   A N+  ++ G  HTL +++   V++ G    G LG  G E  +C+  
Sbjct: 70  KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSE--ECIRV 127

Query: 155 TR-INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEAL 213
            R I   S   +VQV+    H+  + ++ +VF  G N     G     +    P+L+++L
Sbjct: 128 PRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQASPQLIKSL 187

Query: 214 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
            G+P  QV AG   +  LT+ G +   G N  GQLG  D  DR  P  +  L     +V 
Sbjct: 188 LGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLR-TQKIVY 246

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           I  G  +  A+T  G V++FG+G    LGH     E+ PR +  F   G  V +++ G +
Sbjct: 247 ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQ 304

Query: 334 HVVA-LDSSGYVYTWGKGYCGALGHGDEIDKTLP 366
           H  A + SSG +Y++G G  G LG G   ++  P
Sbjct: 305 HTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 77/251 (30%), Positives = 119/251 (47%), Gaps = 17/251 (6%)

Query: 70  IYA-GMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLISN 128
           +YA G+  + Q+ LL       +  +R  ++++  SDI       +Q+  G YH+L +S 
Sbjct: 105 VYAWGLDSDGQLGLLGS-----EECIRVPRNIKSLSDI-----QIVQVACGYYHSLALSK 154

Query: 129 SS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTC 187
           +S VF  G +  G LG G +  +  S   I        +QV+A   H+  +  SG +F  
Sbjct: 155 ASEVFCWGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGW 214

Query: 188 GDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQ 247
           G N     G  D N   + P L+++L+      +  G + T  LT  G V T G+  +GQ
Sbjct: 215 GRNKFGQLGLNDENDR-YVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQ 273

Query: 248 LGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVVYSFGSGSNFCLGHGE 305
           LGH  T     P+ +   E +GS+V QIA G  +  A V  +G +YSFG G N  LG G 
Sbjct: 274 LGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGS 331

Query: 306 QHDELQPRAIQ 316
             +   P  ++
Sbjct: 332 TSNRKSPFTVK 342


>gi|270002050|gb|EEZ98497.1| hypothetical protein TcasGA2_TC000997 [Tribolium castaneum]
          Length = 1042

 Score =  125 bits (315), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 106/330 (32%), Positives = 164/330 (49%), Gaps = 17/330 (5%)

Query: 131 VFSCGSSLCGVLGHG-PETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGD 189
           +F  GS++ G LG G  E     +   +++  A  V++ +   NH  F+ + G+V++CG 
Sbjct: 1   MFGWGSTIHGELGLGGIEEEHVFTPKALDWFEAKSVMKAALGANHTLFLTKDGKVYSCGS 60

Query: 190 NSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLG 249
           N     GH   ++P  RP+LV  L       V  G   +  L+  G V + GS+ +GQLG
Sbjct: 61  NDYGQLGH---DQPRKRPQLVSGLDAYSIINVACGEMHSLALSRWGEVFSWGSDNYGQLG 117

Query: 250 H--GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGE-Q 306
           H  G TL +  PK I  L +   VVQIAAG  + +A+T  G ++ +G+     LG G   
Sbjct: 118 HQLGGTL-QIVPKLIKSLAKY-QVVQIAAGQRHSVALTNAGEIFVWGANDFGQLGLGTIT 175

Query: 307 HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP 366
             E  P  + +    GI    ++ G  H  A+  SG V+ WGK   G LG  D + K  P
Sbjct: 176 PYESTPTTVCSL--SGIPFALIACGANHTFAVSKSGAVFGWGKNINGQLGLNDTVSKKFP 233

Query: 367 EPLSSLK-SHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILD 425
             L +L+ S +    C  +  TF+ +D G V+  G   +G LG    G S+++L PR + 
Sbjct: 234 TQLRTLRNSRVRFISCGDEFSTFLTLD-GGVFSCGAGMYGQLG--HGGTSNEIL-PRQVL 289

Query: 426 SLRAHHVSQISTGLYHTVV-VTDRGRLFGF 454
            L    ++QIS G  H++  V  RGR++ +
Sbjct: 290 ELMGSTITQISCGRQHSLAFVPSRGRVYSY 319



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 87/277 (31%), Positives = 137/277 (49%), Gaps = 12/277 (4%)

Query: 204 IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 263
           +F P+ ++  +     +   G N T FLT  G V++CGSN +GQLGH     R  P+ ++
Sbjct: 22  VFTPKALDWFEAKSVMKAALGANHTLFLTKDGKVYSCGSNDYGQLGHDQP--RKRPQLVS 79

Query: 264 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQ--PRAIQTFRRK 321
            L+   S++ +A G  + LA++  G V+S+GS +   LGH +    LQ  P+ I++  + 
Sbjct: 80  GLDAY-SIINVACGEMHSLALSRWGEVFSWGSDNYGQLGH-QLGGTLQIVPKLIKSLAK- 136

Query: 322 GIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEID-KTLPEPLSSLKSHLAVQV 380
              VV+++AG  H VAL ++G ++ WG    G LG G     ++ P  + SL       +
Sbjct: 137 -YQVVQIAAGQRHSVALTNAGEIFVWGANDFGQLGLGTITPYESTPTTVCSLSGIPFALI 195

Query: 381 CARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLY 440
                 TF +  +G+V+G+G    G LG  D  VS K   P  L +LR   V  IS G  
Sbjct: 196 ACGANHTFAVSKSGAVFGWGKNINGQLGLNDT-VSKKF--PTQLRTLRNSRVRFISCGDE 252

Query: 441 HTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF 477
            +  +T  G +F  G     QLGH      + P ++ 
Sbjct: 253 FSTFLTLDGGVFSCGAGMYGQLGHGGTSNEILPRQVL 289



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 81/289 (28%), Positives = 135/289 (46%), Gaps = 9/289 (3%)

Query: 114 MQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           M+   G  HTL ++ +  V+SCGS+  G LGH     +    + ++   A  ++ V+  E
Sbjct: 37  MKAALGANHTLFLTKDGKVYSCGSNDYGQLGHDQPRKRPQLVSGLD---AYSIINVACGE 93

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            H+  + + G+VF+ G ++    GH+        P+L+++L      Q+ AG   +  LT
Sbjct: 94  MHSLALSRWGEVFSWGSDNYGQLGHQLGGTLQIVPKLIKSLAKYQVVQIAAGQRHSVALT 153

Query: 233 IRGHVHTCGSNTHGQLGHGD-TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
             G +   G+N  GQLG G  T    TP ++  L  +   + IA G ++  AV+ +G V+
Sbjct: 154 NAGEIFVWGANDFGQLGLGTITPYESTPTTVCSLSGIPFAL-IACGANHTFAVSKSGAVF 212

Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 351
            +G   N  LG  +   +  P  ++T R   +  +  S GDE    L   G V++ G G 
Sbjct: 213 GWGKNINGQLGLNDTVSKKFPTQLRTLRNSRVRFI--SCGDEFSTFLTLDGGVFSCGAGM 270

Query: 352 CGALGHGDEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGF 399
            G LGHG   ++ LP  +  L      Q+ C R+     +   G VY +
Sbjct: 271 YGQLGHGGTSNEILPRQVLELMGSTITQISCGRQHSLAFVPSRGRVYSY 319



 Score = 44.3 bits (103), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 25/74 (33%), Positives = 40/74 (54%), Gaps = 3/74 (4%)

Query: 396 VYGFGWMGFGSLGFPDRGVSDK-VLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 454
           ++G+G    G LG    G+ ++ V  P+ LD   A  V + + G  HT+ +T  G+++  
Sbjct: 1   MFGWGSTIHGELGL--GGIEEEHVFTPKALDWFEAKSVMKAALGANHTLFLTKDGKVYSC 58

Query: 455 GDNERAQLGHDTLR 468
           G N+  QLGHD  R
Sbjct: 59  GSNDYGQLGHDQPR 72


>gi|28874834|emb|CAC84086.1| ZR1 protein [Medicago sativa]
          Length = 1035

 Score =  125 bits (315), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 94/312 (30%), Positives = 148/312 (47%), Gaps = 21/312 (6%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V  V+   NHAA V + G+V+  G       G R  +  I  P++V++L  +  K+V  G
Sbjct: 306 VQNVALGGNHAAIVTKQGEVYCWGQGKCGRLGQR-IDMDISSPKIVDSLSDIRVKKVACG 364

Query: 225 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRP--TPKSIAPLEEVGSVVQIAAGPSYML 282
              T  LT  G V+T G ++   L     +     T K   P+E + S+  IA G  +  
Sbjct: 365 EYHTCALTDSGDVYTWGKDSCSDLVDEGRIRSQWLTHKFSLPVEGI-SISSIACGEWHTA 423

Query: 283 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL---- 338
            V+  G ++++G G+   LGHG  H    P+ +++   KG+ V  V+ G  H  A+    
Sbjct: 424 IVSSCGRLFTYGDGTFGVLGHGNYHSFSSPKEVESL--KGLCVRSVACGTWHTAAIIEVS 481

Query: 339 -------DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 391
                   S+G ++TWG    G LGH D ++K +P  +S L  +  VQV   +  T  L 
Sbjct: 482 AERFKYNTSTGKLFTWGDADEGRLGHADNVNKLVPTCVSQLVDYDFVQVSCGRMMTLALT 541

Query: 392 DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRL 451
           + G V+  G   +G LG P   V D+ +   +   L+  +V  IS G YH  V+T  G +
Sbjct: 542 NMGKVFAMGSAKYGQLGNPH--VKDRAV--VVEGMLKQEYVKMISCGSYHVAVLTSSGSV 597

Query: 452 FGFGDNERAQLG 463
           + +G  E  +LG
Sbjct: 598 YTWGKGENGELG 609



 Score = 95.5 bits (236), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 81/274 (29%), Positives = 130/274 (47%), Gaps = 22/274 (8%)

Query: 115 QITTGRYHTLLISNS-SVFSCGSSLCG-VLGHGPETTQCVSFTRINFP-SAAHVVQVSAS 171
           ++  G YHT  +++S  V++ G   C  ++  G   +Q ++  + + P     +  ++  
Sbjct: 360 KVACGEYHTCALTDSGDVYTWGKDSCSDLVDEGRIRSQWLTH-KFSLPVEGISISSIACG 418

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG-- 229
           E H A V   G++FT GD +    GH + +     P+ VE+LKG+  + V  G   T   
Sbjct: 419 EWHTAIVSSCGRLFTYGDGTFGVLGHGNYH-SFSSPKEVESLKGLCVRSVACGTWHTAAI 477

Query: 230 ---------FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 280
                    + T  G + T G    G+LGH D +++  P  ++ L +    VQ++ G   
Sbjct: 478 IEVSAERFKYNTSTGKLFTWGDADEGRLGHADNVNKLVPTCVSQLVDY-DFVQVSCGRMM 536

Query: 281 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTF-RRKGIHVVRVSAGDEHVVALD 339
            LA+T  G V++ GS     LG+    D    RA+      K  +V  +S G  HV  L 
Sbjct: 537 TLALTNMGKVFAMGSAKYGQLGNPHVKD----RAVVVEGMLKQEYVKMISCGSYHVAVLT 592

Query: 340 SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
           SSG VYTWGKG  G LG GD  ++  P  + +L+
Sbjct: 593 SSGSVYTWGKGENGELGLGDTENRYTPCFVEALR 626



 Score = 72.4 bits (176), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 49/163 (30%), Positives = 69/163 (42%), Gaps = 19/163 (11%)

Query: 323 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCA 382
           + V  V+ G  H   +   G VY WG+G CG LG   ++D + P+ + SL      +V  
Sbjct: 304 LDVQNVALGGNHAAIVTKQGEVYCWGQGKCGRLGQRIDMDISSPKIVDSLSDIRVKKVAC 363

Query: 383 RKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHH---------VS 433
            +  T  L D+G VY +G              SD V   RI      H          +S
Sbjct: 364 GEYHTCALTDSGDVYTWG----------KDSCSDLVDEGRIRSQWLTHKFSLPVEGISIS 413

Query: 434 QISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 476
            I+ G +HT +V+  GRLF +GD     LGH        P E+
Sbjct: 414 SIACGEWHTAIVSSCGRLFTYGDGTFGVLGHGNYHSFSSPKEV 456



 Score = 71.6 bits (174), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 61/217 (28%), Positives = 94/217 (43%), Gaps = 18/217 (8%)

Query: 271 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 330
           V  +A G ++   VT  G VY +G G    LG     D   P+ + +     I V +V+ 
Sbjct: 306 VQNVALGGNHAAIVTKQGEVYCWGQGKCGRLGQRIDMDISSPKIVDSL--SDIRVKKVAC 363

Query: 331 GDEHVVALDSSGYVYTWGKGYCGAL-GHGDEIDKTLPEPLSSLKSHLAVQ-VCARKRKTF 388
           G+ H  AL  SG VYTWGK  C  L   G    + L    S     +++  +   +  T 
Sbjct: 364 GEYHTCALTDSGDVYTWGKDSCSDLVDEGRIRSQWLTHKFSLPVEGISISSIACGEWHTA 423

Query: 389 VLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVV--- 445
           ++   G ++ +G   FG LG    G       P+ ++SL+   V  ++ G +HT  +   
Sbjct: 424 IVSSCGRLFTYGDGTFGVLG---HGNYHSFSSPKEVESLKGLCVRSVACGTWHTAAIIEV 480

Query: 446 --------TDRGRLFGFGDNERAQLGHDTLRGCLEPT 474
                   T  G+LF +GD +  +LGH      L PT
Sbjct: 481 SAERFKYNTSTGKLFTWGDADEGRLGHADNVNKLVPT 517



 Score = 70.1 bits (170), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 65/236 (27%), Positives = 103/236 (43%), Gaps = 20/236 (8%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHG-------PETTQ-----CVSFTRINFPSA 162
           I  G +HT ++S+   +F+ G    GVLGHG       P+  +     CV          
Sbjct: 415 IACGEWHTAIVSSCGRLFTYGDGTFGVLGHGNYHSFSSPKEVESLKGLCVRSVACGTWHT 474

Query: 163 AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 222
           A +++VSA      +   +G++FT GD      GH D    +  P  V  L      QV+
Sbjct: 475 AAIIEVSAE--RFKYNTSTGKLFTWGDADEGRLGHADNVNKLV-PTCVSQLVDYDFVQVS 531

Query: 223 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 282
            G   T  LT  G V   GS  +GQLG+    DR     +  + +   V  I+ G  ++ 
Sbjct: 532 CGRMMTLALTNMGKVFAMGSAKYGQLGNPHVKDRAV--VVEGMLKQEYVKMISCGSYHVA 589

Query: 283 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
            +T +G VY++G G N  LG G+  +   P  ++  R + +    ++ G    VA+
Sbjct: 590 VLTSSGSVYTWGKGENGELGLGDTENRYTPCFVEALRDRQVDT--ITCGPSFTVAI 643



 Score = 49.7 bits (117), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 52/186 (27%), Positives = 77/186 (41%), Gaps = 18/186 (9%)

Query: 102 HSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPS 161
           H++ I+E SA   +  T        S   +F+ G +  G LGH     + V  T ++   
Sbjct: 473 HTAAIIEVSAERFKYNT--------STGKLFTWGDADEGRLGHADNVNKLVP-TCVSQLV 523

Query: 162 AAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEA---LKGVPC 218
               VQVS        +   G+VF  G        +     P  + R V     LK    
Sbjct: 524 DYDFVQVSCGRMMTLALTNMGKVFAMGSAK-----YGQLGNPHVKDRAVVVEGMLKQEYV 578

Query: 219 KQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGP 278
           K ++ G      LT  G V+T G   +G+LG GDT +R TP  +  L +   V  I  GP
Sbjct: 579 KMISCGSYHVAVLTSSGSVYTWGKGENGELGLGDTENRYTPCFVEALRD-RQVDTITCGP 637

Query: 279 SYMLAV 284
           S+ +A+
Sbjct: 638 SFTVAI 643


>gi|307106699|gb|EFN54944.1| hypothetical protein CHLNCDRAFT_134694 [Chlorella variabilis]
          Length = 434

 Score =  125 bits (315), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 106/369 (28%), Positives = 159/369 (43%), Gaps = 21/369 (5%)

Query: 116 ITTGRYHTLLI----SNSSVFSCGSSLCGVLGHGP----ETTQCVSFTRINFPSAAHVVQ 167
           +  G  H+L +    S S V S G    G LGHG     +  Q V        ++ H   
Sbjct: 12  LACGSSHSLALISTPSGSMVLSWGRGEDGQLGHGDAEDRQEPQAVFSLLHRGATSVHC-- 69

Query: 168 VSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF 227
              +E   A      QV++ G       G  D  + +F P  + AL G     V  G   
Sbjct: 70  --GAEYSMAVAGGDKQVYSWGWGDFGRLGTGDV-KDVFIPCPLPALAGRRVASVACGDTH 126

Query: 228 TGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN 287
           T   T  G +   G N +GQ G G   D   P+ +  L+    VV +A G  + + VT  
Sbjct: 127 TLVATAEGQLFAFGRNQNGQCGLGSIQDCLEPQLVTALQGK-EVVAVACGAEHSMCVTSE 185

Query: 288 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 347
           G VY +G G    +G GE  D   P   +    +G+ V +V+ G  H +A+D  G +YTW
Sbjct: 186 GEVYCWGWGRYGNIGDGESQDRHLPTLAKGL--EGVKVAQVNCGWRHSIAVDEGGAMYTW 243

Query: 348 GKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSL 407
           G G    L  GD  D  +P+ + +++      V    R T      G ++  GW  FG  
Sbjct: 244 GWGAYAQLMQGDRKDHYVPKRVEAVQQ--VATVAGGWRHTMAADSQGRLFASGWNKFGQC 301

Query: 408 GFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTL 467
           G    G ++ V+R + +++L    V Q+ +G  HT+ VT  G+ F +G N   QLGH  +
Sbjct: 302 GV---GHNEDVVRVQQVEALAGERVVQVKSGWKHTMAVTHTGKFFSWGRNVNGQLGHSGM 358

Query: 468 RGCLEPTEI 476
           +    P E+
Sbjct: 359 QDSNSPVEL 367



 Score = 85.9 bits (211), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 59/169 (34%), Positives = 84/169 (49%), Gaps = 7/169 (4%)

Query: 324 HVVRVSAGDEHVVAL---DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQV 380
            V+ ++ G  H +AL    S   V +WG+G  G LGHGD  D+  P+ + SL    A  V
Sbjct: 8   EVIGLACGSSHSLALISTPSGSMVLSWGRGEDGQLGHGDAEDRQEPQAVFSLLHRGATSV 67

Query: 381 -CARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGL 439
            C  +    V      VY +GW  FG LG  D  V D V  P  L +L    V+ ++ G 
Sbjct: 68  HCGAEYSMAVAGGDKQVYSWGWGDFGRLGTGD--VKD-VFIPCPLPALAGRRVASVACGD 124

Query: 440 YHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQEMEEDTGLA 488
            HT+V T  G+LF FG N+  Q G  +++ CLEP  +   + +E   +A
Sbjct: 125 THTLVATAEGQLFAFGRNQNGQCGLGSIQDCLEPQLVTALQGKEVVAVA 173



 Score = 78.2 bits (191), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 73/277 (26%), Positives = 118/277 (42%), Gaps = 9/277 (3%)

Query: 116 ITTGRYHTLL-ISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           +  G  HTL+  +   +F+ G +  G  G G     C+    +       VV V+    H
Sbjct: 120 VACGDTHTLVATAEGQLFAFGRNQNGQCGLG-SIQDCLEPQLVTALQGKEVVAVACGAEH 178

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 234
           +  V   G+V+  G       G  ++      P L + L+GV   QV  G   +  +   
Sbjct: 179 SMCVTSEGEVYCWGWGRYGNIGDGESQDRHL-PTLAKGLEGVKVAQVNCGWRHSIAVDEG 237

Query: 235 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 294
           G ++T G   + QL  GD  D   PK +  +++V +V   A G  + +A    G +  F 
Sbjct: 238 GAMYTWGWGAYAQLMQGDRKDHYVPKRVEAVQQVATV---AGGWRHTMAADSQGRL--FA 292

Query: 295 SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGA 354
           SG N     G  H+E   R  Q     G  VV+V +G +H +A+  +G  ++WG+   G 
Sbjct: 293 SGWNKFGQCGVGHNEDVVRVQQVEALAGERVVQVKSGWKHTMAVTHTGKFFSWGRNVNGQ 352

Query: 355 LGHGDEIDKTLPEPLSSL-KSHLAVQVCARKRKTFVL 390
           LGH    D   P  L++L +  +      R+ +  VL
Sbjct: 353 LGHSGMQDSNSPVELAALSRGGINTDALTRQAQPVVL 389


>gi|149689920|ref|XP_001503636.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
           2 [Equus caballus]
          Length = 1057

 Score =  125 bits (314), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 89/276 (32%), Positives = 139/276 (50%), Gaps = 10/276 (3%)

Query: 204 IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 263
           +  PR  +       + V  GL  T F+   G V+TCG N  GQLGH  +  R  P+ + 
Sbjct: 22  VLEPRKSDFFINKKVRDVGCGLRHTVFVLHDGTVYTCGCNDLGQLGHEKS--RKKPEQVV 79

Query: 264 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH-GEQHDELQPRAIQTFRRKG 322
            L+   ++V ++ G ++ LA+   G VY++G  S+  LG  G +     PR I++     
Sbjct: 80  ALD-AQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSL--SD 136

Query: 323 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTL-PEPLSSLKSHLAVQVC 381
           I +V+V+ G  H +AL  +  V+ WG+   G LG G +  K   P+ + SL     +QV 
Sbjct: 137 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDYKKQASPQLIKSLLGIPFMQVA 196

Query: 382 ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYH 441
           A    +FVL  +G+++G+G   FG LG  D   +D+   P +L SLR   +  I  G  H
Sbjct: 197 AGGAHSFVLTLSGAIFGWGRNKFGQLGLNDE--NDRYF-PNLLKSLRTQKIVYICCGEDH 253

Query: 442 TVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF 477
           T  +T  G +F FG     QLGH++    + P ++F
Sbjct: 254 TAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVF 289



 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 104/333 (31%), Positives = 153/333 (45%), Gaps = 13/333 (3%)

Query: 135 GSSLCGVLGHGPETTQCVSFTRI-NFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSF 193
           G++  G LG G    + V   R  +F     V  V     H  FVL  G V+TCG N   
Sbjct: 5   GNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLHDGTVYTCGCNDLG 64

Query: 194 CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGH-GD 252
             GH  + +   +P  V AL       V+ G   T  L  +G V+  G ++ GQLG  G 
Sbjct: 65  QLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGS 121

Query: 253 TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHG-EQHDELQ 311
                 P++I  L ++  +VQ+A G  + LA++    V+ +G      LG G +   +  
Sbjct: 122 EECIRVPRNIKSLSDI-QIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDYKKQAS 180

Query: 312 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSS 371
           P+ I++    GI  ++V+AG  H   L  SG ++ WG+   G LG  DE D+  P  L S
Sbjct: 181 PQLIKSLL--GIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYFPNLLKS 238

Query: 372 LKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHH 431
           L++   V +C  +  T  L   G V+ FG  G+G LG      +   + PR +  L    
Sbjct: 239 LRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG---HNSTSHEINPRKVFELMGSI 295

Query: 432 VSQISTGLYHT-VVVTDRGRLFGFGDNERAQLG 463
           V+QI+ G  HT   V   GR++ FG     QLG
Sbjct: 296 VTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 80/291 (27%), Positives = 138/291 (47%), Gaps = 8/291 (2%)

Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 179
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V VS  E H   + 
Sbjct: 44  RHTVFVLHDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVSCGEAHTLALN 100

Query: 180 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 239
             GQV+  G +S    G   +   I  PR +++L  +   QV  G   +  L+    V  
Sbjct: 101 DKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFC 160

Query: 240 CGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
            G N +GQLG G D   + +P+ I  L  +   +Q+AAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKYGQLGLGIDYKKQASPQLIKSLLGI-PFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 299 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 358
             LG  +++D   P  +++ R + I  V +  G++H  AL   G V+T+G G  G LGH 
Sbjct: 220 GQLGLNDENDRYFPNLLKSLRTQKI--VYICCGEDHTAALTKEGGVFTFGAGGYGQLGHN 277

Query: 359 DEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLG 408
               +  P  +  L   +  Q+ C R+  +  +  +G +Y FG  G G LG
Sbjct: 278 STSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 84/274 (30%), Positives = 132/274 (48%), Gaps = 10/274 (3%)

Query: 98  QSVEHSSDIVETSAGNM-QITTGRYHTLLISNS-SVFSCGSSLCGVLGH-GPETTQCVSF 154
           +S +    +V   A N+  ++ G  HTL +++   V++ G    G LG  G E  +C+  
Sbjct: 70  KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSE--ECIRV 127

Query: 155 TR-INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEAL 213
            R I   S   +VQV+    H+  + ++ +VF  G N     G     +    P+L+++L
Sbjct: 128 PRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDYKKQASPQLIKSL 187

Query: 214 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
            G+P  QV AG   +  LT+ G +   G N  GQLG  D  DR  P  +  L     +V 
Sbjct: 188 LGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYFPNLLKSLR-TQKIVY 246

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           I  G  +  A+T  G V++FG+G    LGH     E+ PR +  F   G  V +++ G +
Sbjct: 247 ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQ 304

Query: 334 HVVA-LDSSGYVYTWGKGYCGALGHGDEIDKTLP 366
           H  A + SSG +Y++G G  G LG G   ++  P
Sbjct: 305 HTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338



 Score = 82.0 bits (201), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 78/251 (31%), Positives = 119/251 (47%), Gaps = 17/251 (6%)

Query: 70  IYA-GMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLISN 128
           +YA G+  + Q+ LL       +  +R  ++++  SDI       +Q+  G YH+L +S 
Sbjct: 105 VYAWGLDSDGQLGLLGS-----EECIRVPRNIKSLSDI-----QIVQVACGYYHSLALSK 154

Query: 129 SS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTC 187
           +S VF  G +  G LG G +  +  S   I        +QV+A   H+  +  SG +F  
Sbjct: 155 ASEVFCWGQNKYGQLGLGIDYKKQASPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGW 214

Query: 188 GDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQ 247
           G N     G  D N   F P L+++L+      +  G + T  LT  G V T G+  +GQ
Sbjct: 215 GRNKFGQLGLNDENDRYF-PNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQ 273

Query: 248 LGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVVYSFGSGSNFCLGHGE 305
           LGH  T     P+ +   E +GS+V QIA G  +  A V  +G +YSFG G N  LG G 
Sbjct: 274 LGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGS 331

Query: 306 QHDELQPRAIQ 316
             +   P  ++
Sbjct: 332 TSNRKSPFTVK 342


>gi|149689922|ref|XP_001503631.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
           1 [Equus caballus]
          Length = 1049

 Score =  125 bits (314), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 89/276 (32%), Positives = 139/276 (50%), Gaps = 10/276 (3%)

Query: 204 IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 263
           +  PR  +       + V  GL  T F+   G V+TCG N  GQLGH  +  R  P+ + 
Sbjct: 22  VLEPRKSDFFINKKVRDVGCGLRHTVFVLHDGTVYTCGCNDLGQLGHEKS--RKKPEQVV 79

Query: 264 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH-GEQHDELQPRAIQTFRRKG 322
            L+   ++V ++ G ++ LA+   G VY++G  S+  LG  G +     PR I++     
Sbjct: 80  ALD-AQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSL--SD 136

Query: 323 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTL-PEPLSSLKSHLAVQVC 381
           I +V+V+ G  H +AL  +  V+ WG+   G LG G +  K   P+ + SL     +QV 
Sbjct: 137 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDYKKQASPQLIKSLLGIPFMQVA 196

Query: 382 ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYH 441
           A    +FVL  +G+++G+G   FG LG  D   +D+   P +L SLR   +  I  G  H
Sbjct: 197 AGGAHSFVLTLSGAIFGWGRNKFGQLGLNDE--NDRYF-PNLLKSLRTQKIVYICCGEDH 253

Query: 442 TVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF 477
           T  +T  G +F FG     QLGH++    + P ++F
Sbjct: 254 TAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVF 289



 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 104/333 (31%), Positives = 153/333 (45%), Gaps = 13/333 (3%)

Query: 135 GSSLCGVLGHGPETTQCVSFTRI-NFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSF 193
           G++  G LG G    + V   R  +F     V  V     H  FVL  G V+TCG N   
Sbjct: 5   GNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLHDGTVYTCGCNDLG 64

Query: 194 CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGH-GD 252
             GH  + +   +P  V AL       V+ G   T  L  +G V+  G ++ GQLG  G 
Sbjct: 65  QLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGS 121

Query: 253 TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHG-EQHDELQ 311
                 P++I  L ++  +VQ+A G  + LA++    V+ +G      LG G +   +  
Sbjct: 122 EECIRVPRNIKSLSDI-QIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDYKKQAS 180

Query: 312 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSS 371
           P+ I++    GI  ++V+AG  H   L  SG ++ WG+   G LG  DE D+  P  L S
Sbjct: 181 PQLIKSLL--GIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYFPNLLKS 238

Query: 372 LKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHH 431
           L++   V +C  +  T  L   G V+ FG  G+G LG      +   + PR +  L    
Sbjct: 239 LRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG---HNSTSHEINPRKVFELMGSI 295

Query: 432 VSQISTGLYHT-VVVTDRGRLFGFGDNERAQLG 463
           V+QI+ G  HT   V   GR++ FG     QLG
Sbjct: 296 VTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  109 bits (272), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 80/291 (27%), Positives = 138/291 (47%), Gaps = 8/291 (2%)

Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 179
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V VS  E H   + 
Sbjct: 44  RHTVFVLHDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVSCGEAHTLALN 100

Query: 180 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 239
             GQV+  G +S    G   +   I  PR +++L  +   QV  G   +  L+    V  
Sbjct: 101 DKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFC 160

Query: 240 CGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
            G N +GQLG G D   + +P+ I  L  +   +Q+AAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKYGQLGLGIDYKKQASPQLIKSLLGI-PFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 299 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 358
             LG  +++D   P  +++ R + I  V +  G++H  AL   G V+T+G G  G LGH 
Sbjct: 220 GQLGLNDENDRYFPNLLKSLRTQKI--VYICCGEDHTAALTKEGGVFTFGAGGYGQLGHN 277

Query: 359 DEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLG 408
               +  P  +  L   +  Q+ C R+  +  +  +G +Y FG  G G LG
Sbjct: 278 STSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 84/274 (30%), Positives = 132/274 (48%), Gaps = 10/274 (3%)

Query: 98  QSVEHSSDIVETSAGNM-QITTGRYHTLLISNS-SVFSCGSSLCGVLGH-GPETTQCVSF 154
           +S +    +V   A N+  ++ G  HTL +++   V++ G    G LG  G E  +C+  
Sbjct: 70  KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSE--ECIRV 127

Query: 155 TR-INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEAL 213
            R I   S   +VQV+    H+  + ++ +VF  G N     G     +    P+L+++L
Sbjct: 128 PRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDYKKQASPQLIKSL 187

Query: 214 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
            G+P  QV AG   +  LT+ G +   G N  GQLG  D  DR  P  +  L     +V 
Sbjct: 188 LGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYFPNLLKSLR-TQKIVY 246

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           I  G  +  A+T  G V++FG+G    LGH     E+ PR +  F   G  V +++ G +
Sbjct: 247 ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQ 304

Query: 334 HVVA-LDSSGYVYTWGKGYCGALGHGDEIDKTLP 366
           H  A + SSG +Y++G G  G LG G   ++  P
Sbjct: 305 HTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338



 Score = 82.0 bits (201), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 78/251 (31%), Positives = 119/251 (47%), Gaps = 17/251 (6%)

Query: 70  IYA-GMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLISN 128
           +YA G+  + Q+ LL       +  +R  ++++  SDI       +Q+  G YH+L +S 
Sbjct: 105 VYAWGLDSDGQLGLLGS-----EECIRVPRNIKSLSDI-----QIVQVACGYYHSLALSK 154

Query: 129 SS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTC 187
           +S VF  G +  G LG G +  +  S   I        +QV+A   H+  +  SG +F  
Sbjct: 155 ASEVFCWGQNKYGQLGLGIDYKKQASPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGW 214

Query: 188 GDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQ 247
           G N     G  D N   F P L+++L+      +  G + T  LT  G V T G+  +GQ
Sbjct: 215 GRNKFGQLGLNDENDRYF-PNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQ 273

Query: 248 LGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVVYSFGSGSNFCLGHGE 305
           LGH  T     P+ +   E +GS+V QIA G  +  A V  +G +YSFG G N  LG G 
Sbjct: 274 LGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGS 331

Query: 306 QHDELQPRAIQ 316
             +   P  ++
Sbjct: 332 TSNRKSPFTVK 342


>gi|431911479|gb|ELK13685.1| Putative E3 ubiquitin-protein ligase HERC6 [Pteropus alecto]
          Length = 1010

 Score =  125 bits (314), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 86/253 (33%), Positives = 127/253 (50%), Gaps = 5/253 (1%)

Query: 215 GVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQI 274
           G   +Q   G   +  L   G VH+CG NT GQLG         P  I  LE +  V  +
Sbjct: 20  GAEVRQAACGERHSLLLLSDGTVHSCGDNTQGQLGRRGKPREERPGLIKALETL-LVGLV 78

Query: 275 AAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDEL-QPRAIQTFRRKGIHVVRVSAGDE 333
           + G  + LAV   G V+++G+GS   LG  E  +++  P+ I+T    GI +++VS G  
Sbjct: 79  SCGKEHSLAVCHKGRVFAWGAGSEGQLGIEECKEKIFTPKKIKTL--TGIKIIQVSCGHY 136

Query: 334 HVVALDSSGYVYTWGKGYCGALGHGDEI-DKTLPEPLSSLKSHLAVQVCARKRKTFVLVD 392
           H +AL   G VY+WGK   G LG G E   +  P+ + SL+     QV A    +F L  
Sbjct: 137 HSLALSEDGQVYSWGKNSQGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSL 196

Query: 393 TGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLF 452
           +G+ +G+G    G L         +  +P  + +L++  V  IS G  HT V+T  G++F
Sbjct: 197 SGTSFGWGSNNTGQLALSGNNTPVQRYKPHSIGALKSLDVIYISCGYEHTAVLTQNGKVF 256

Query: 453 GFGDNERAQLGHD 465
            FGDN   QLG++
Sbjct: 257 TFGDNSCGQLGYN 269



 Score =  111 bits (277), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 91/299 (30%), Positives = 144/299 (48%), Gaps = 14/299 (4%)

Query: 163 AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 222
           A V Q +  E H+  +L  G V +CGDN+    G R   R   RP L++AL+ +    V+
Sbjct: 21  AEVRQAACGERHSLLLLSDGTVHSCGDNTQGQLGRRGKPREE-RPGLIKALETLLVGLVS 79

Query: 223 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRP-TPKSIAPLEEVGSVVQIAAGPSYM 281
            G   +  +  +G V   G+ + GQLG  +  ++  TPK I  L  +  ++Q++ G  + 
Sbjct: 80  CGKEHSLAVCHKGRVFAWGAGSEGQLGIEECKEKIFTPKKIKTLTGI-KIIQVSCGHYHS 138

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQH-DELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 340
           LA++ +G VYS+G  S   LG G++   +  P+ +++   +GI + +V+AG  H  AL  
Sbjct: 139 LALSEDGQVYSWGKNSQGQLGLGKEFPSQASPQRVRSL--EGIPLAQVAAGGAHSFALSL 196

Query: 341 SGYVYTWGKGYCGAL---GHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVY 397
           SG  + WG    G L   G+   + +  P  + +LKS   + +      T VL   G V+
Sbjct: 197 SGTSFGWGSNNTGQLALSGNNTPVQRYKPHSIGALKSLDVIYISCGYEHTAVLTQNGKVF 256

Query: 398 GFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV-VTDRGRLFGFG 455
            FG    G LG+          +   +D L    VSQI  G YHT+  V   G +  FG
Sbjct: 257 TFGDNSCGQLGYNPTAKKRGPQQVEGIDGL----VSQIDCGSYHTLAYVYTTGEVVSFG 311



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 83/305 (27%), Positives = 138/305 (45%), Gaps = 18/305 (5%)

Query: 107 VETSAGNMQITTG----RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSA 162
           V T AG  ++       R+  LL+S+ +V SCG +  G LG   +  +     R     A
Sbjct: 14  VPTGAGGAEVRQAACGERHSLLLLSDGTVHSCGDNTQGQLGRRGKPRE----ERPGLIKA 69

Query: 163 AHVVQV---SASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCK 219
              + V   S  + H+  V   G+VF  G  S    G  +    IF P+ ++ L G+   
Sbjct: 70  LETLLVGLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGIEECKEKIFTPKKIKTLTGIKII 129

Query: 220 QVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTL-DRPTPKSIAPLEEVGSVVQIAAGP 278
           QV+ G   +  L+  G V++ G N+ GQLG G     + +P+ +  LE +  + Q+AAG 
Sbjct: 130 QVSCGHYHSLALSEDGQVYSWGKNSQGQLGLGKEFPSQASPQRVRSLEGI-PLAQVAAGG 188

Query: 279 SYMLAVTGNGVVYSFGSGSNFCL---GHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHV 335
           ++  A++ +G  + +GS +   L   G+       +P +I     K + V+ +S G EH 
Sbjct: 189 AHSFALSLSGTSFGWGSNNTGQLALSGNNTPVQRYKPHSIGAL--KSLDVIYISCGYEHT 246

Query: 336 VALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGS 395
             L  +G V+T+G   CG LG+     K  P+ +  +   ++   C        +  TG 
Sbjct: 247 AVLTQNGKVFTFGDNSCGQLGYNPTAKKRGPQQVEGIDGLVSQIDCGSYHTLAYVYTTGE 306

Query: 396 VYGFG 400
           V  FG
Sbjct: 307 VVSFG 311


>gi|426255642|ref|XP_004021457.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 3
           [Ovis aries]
          Length = 979

 Score =  125 bits (314), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 88/276 (31%), Positives = 140/276 (50%), Gaps = 10/276 (3%)

Query: 204 IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 263
           +  PR  +       + V  GL  T F+   G V+TCG N  GQLGH  +  R  P+ + 
Sbjct: 22  VLEPRKSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKS--RKKPEQVV 79

Query: 264 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH-GEQHDELQPRAIQTFRRKG 322
            L+   ++V ++ G ++ LA+   G VY++G  S+  LG  G +     PR I++     
Sbjct: 80  ALD-AQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSL--SD 136

Query: 323 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTL-PEPLSSLKSHLAVQVC 381
           I +V+V+ G  H +AL  +  V+ WG+   G LG G +  K   P+ + SL     +Q+ 
Sbjct: 137 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQIA 196

Query: 382 ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYH 441
           A    +FVL  +G+++G+G   FG LG  D   +D+ + P +L SLR   +  I  G  H
Sbjct: 197 AGGAHSFVLTLSGAIFGWGRNKFGQLGLNDE--NDRYV-PNLLKSLRTQKIVYICCGEDH 253

Query: 442 TVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF 477
           T  +T  G +F FG     QLGH++    + P ++F
Sbjct: 254 TAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVF 289



 Score =  122 bits (307), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 103/333 (30%), Positives = 154/333 (46%), Gaps = 13/333 (3%)

Query: 135 GSSLCGVLGHGPETTQCVSFTRI-NFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSF 193
           G++  G LG G    + V   R  +F     V  V     H  FVL  G V+TCG N   
Sbjct: 5   GNASFGQLGLGGIDEEIVLEPRKSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLG 64

Query: 194 CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGH-GD 252
             GH  + +   +P  V AL       V+ G   T  L  +G V+  G ++ GQLG  G 
Sbjct: 65  QLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGS 121

Query: 253 TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHG-EQHDELQ 311
                 P++I  L ++  +VQ+A G  + LA++    V+ +G      LG G +   +  
Sbjct: 122 EECIRVPRNIKSLSDI-QIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQAS 180

Query: 312 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSS 371
           P+ I++    GI  ++++AG  H   L  SG ++ WG+   G LG  DE D+ +P  L S
Sbjct: 181 PQLIKSLL--GIPFMQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKS 238

Query: 372 LKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHH 431
           L++   V +C  +  T  L   G V+ FG  G+G LG      +   + PR +  L    
Sbjct: 239 LRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG---HNSTSHEINPRKVFELMGSI 295

Query: 432 VSQISTGLYHT-VVVTDRGRLFGFGDNERAQLG 463
           V+QI+ G  HT   V   GR++ FG     QLG
Sbjct: 296 VTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 81/291 (27%), Positives = 138/291 (47%), Gaps = 8/291 (2%)

Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 179
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V VS  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVSCGEAHTLALN 100

Query: 180 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 239
             GQV+  G +S    G   +   I  PR +++L  +   QV  G   +  L+    V  
Sbjct: 101 DKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFC 160

Query: 240 CGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
            G N +GQLG G D   + +P+ I  L  +   +QIAAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKYGQLGLGIDCKKQASPQLIKSLLGI-PFMQIAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 299 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 358
             LG  +++D   P  +++ R + I  V +  G++H  AL   G V+T+G G  G LGH 
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRTQKI--VYICCGEDHTAALTKEGGVFTFGAGGYGQLGHN 277

Query: 359 DEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLG 408
               +  P  +  L   +  Q+ C R+  +  +  +G +Y FG  G G LG
Sbjct: 278 STSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 83/274 (30%), Positives = 132/274 (48%), Gaps = 10/274 (3%)

Query: 98  QSVEHSSDIVETSAGNM-QITTGRYHTLLISNS-SVFSCGSSLCGVLGH-GPETTQCVSF 154
           +S +    +V   A N+  ++ G  HTL +++   V++ G    G LG  G E  +C+  
Sbjct: 70  KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSE--ECIRV 127

Query: 155 TR-INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEAL 213
            R I   S   +VQV+    H+  + ++ +VF  G N     G     +    P+L+++L
Sbjct: 128 PRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQASPQLIKSL 187

Query: 214 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
            G+P  Q+ AG   +  LT+ G +   G N  GQLG  D  DR  P  +  L     +V 
Sbjct: 188 LGIPFMQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLR-TQKIVY 246

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           I  G  +  A+T  G V++FG+G    LGH     E+ PR +  F   G  V +++ G +
Sbjct: 247 ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQ 304

Query: 334 HVVA-LDSSGYVYTWGKGYCGALGHGDEIDKTLP 366
           H  A + SSG +Y++G G  G LG G   ++  P
Sbjct: 305 HTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 76/251 (30%), Positives = 119/251 (47%), Gaps = 17/251 (6%)

Query: 70  IYA-GMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLISN 128
           +YA G+  + Q+ LL       +  +R  ++++  SDI       +Q+  G YH+L +S 
Sbjct: 105 VYAWGLDSDGQLGLLGS-----EECIRVPRNIKSLSDI-----QIVQVACGYYHSLALSK 154

Query: 129 SS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTC 187
           +S VF  G +  G LG G +  +  S   I        +Q++A   H+  +  SG +F  
Sbjct: 155 ASEVFCWGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQIAAGGAHSFVLTLSGAIFGW 214

Query: 188 GDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQ 247
           G N     G  D N   + P L+++L+      +  G + T  LT  G V T G+  +GQ
Sbjct: 215 GRNKFGQLGLNDENDR-YVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQ 273

Query: 248 LGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVVYSFGSGSNFCLGHGE 305
           LGH  T     P+ +   E +GS+V QIA G  +  A V  +G +YSFG G N  LG G 
Sbjct: 274 LGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGS 331

Query: 306 QHDELQPRAIQ 316
             +   P  ++
Sbjct: 332 TSNRKSPFTVK 342


>gi|157111251|ref|XP_001651453.1| hect E3 ubiquitin ligase [Aedes aegypti]
 gi|108878447|gb|EAT42672.1| AAEL005820-PA [Aedes aegypti]
          Length = 1057

 Score =  125 bits (314), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 95/328 (28%), Positives = 162/328 (49%), Gaps = 12/328 (3%)

Query: 130 SVFSCGSSLCGVLGHG-PETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCG 188
           +V+  G+++ G LG G  E  Q +    +++  ++ V Q +   +H   + + G++F+CG
Sbjct: 2   AVYCWGNTVHGELGLGGIEDEQVLLPREMDWCHSSSVQQAACGTSHTLLLTKDGKLFSCG 61

Query: 189 DNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQL 248
           +N     GH     P  RP+ + +L+      V+ G   +  LT  G V + GSN+ GQL
Sbjct: 62  NNDHGQLGHDTDCLPNKRPQFISSLENYIVTHVSCGTTHSLALTNWGQVFSWGSNSIGQL 121

Query: 249 GHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHD 308
           GH   L   T   +       +VVQIA+G  + LA+T +G ++S+G+     LG G   +
Sbjct: 122 GHDTDLQTYTTPRMIKTIATKTVVQIASGQFHSLALTNSGELFSWGANGYGQLGLGTTGE 181

Query: 309 E-LQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPE 367
           + + P  +++    GI +  ++ G  H  A+  SG ++ WGK   G LG  D + +  P+
Sbjct: 182 KVVTPTLVKSL--AGIPIAFIACGGNHSFAVSKSGAIFGWGKNTFGQLGLNDLVSRCFPQ 239

Query: 368 PLSSLKSHLAVQV--CARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILD 425
            L +L+ +L V+   C      F L   G V+  G   FG LG    G     + PR++ 
Sbjct: 240 QLKTLR-NLGVRYISCGDDFSAF-LTQEGGVFTCGAGTFGQLG---HGTCSNEILPRMVF 294

Query: 426 SLRAHHVSQISTGLYHTVV-VTDRGRLF 452
            L    ++QI+ G  HT+  V  RG+++
Sbjct: 295 ELMGSKITQIACGRRHTLAFVPSRGKIY 322



 Score =  112 bits (281), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 90/282 (31%), Positives = 139/282 (49%), Gaps = 13/282 (4%)

Query: 201 NRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHG-DTLDRPTP 259
           +  +  PR ++       +Q   G + T  LT  G + +CG+N HGQLGH  D L    P
Sbjct: 21  DEQVLLPREMDWCHSSSVQQAACGTSHTLLLTKDGKLFSCGNNDHGQLGHDTDCLPNKRP 80

Query: 260 KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHG-EQHDELQPRAIQTF 318
           + I+ LE    V  ++ G ++ LA+T  G V+S+GS S   LGH  +      PR I+T 
Sbjct: 81  QFISSLENY-IVTHVSCGTTHSLALTNWGQVFSWGSNSIGQLGHDTDLQTYTTPRMIKTI 139

Query: 319 RRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTL-PEPLSSLKSHLA 377
             K   VV++++G  H +AL +SG +++WG    G LG G   +K + P  + SL     
Sbjct: 140 ATKT--VVQIASGQFHSLALTNSGELFSWGANGYGQLGLGTTGEKVVTPTLVKSLAGIPI 197

Query: 378 VQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLR--PRILDSLRAHHVSQI 435
             +      +F +  +G+++G+G   FG LG     ++D V R  P+ L +LR   V  I
Sbjct: 198 AFIACGGNHSFAVSKSGAIFGWGKNTFGQLG-----LNDLVSRCFPQQLKTLRNLGVRYI 252

Query: 436 STGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF 477
           S G   +  +T  G +F  G     QLGH T    + P  +F
Sbjct: 253 SCGDDFSAFLTQEGGVFTCGAGTFGQLGHGTCSNEILPRMVF 294



 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 87/294 (29%), Positives = 139/294 (47%), Gaps = 12/294 (4%)

Query: 110 SAGNMQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAH---V 165
           S+   Q   G  HTLL++ +  +FSCG++  G LGH    T C+   R  F S+     V
Sbjct: 35  SSSVQQAACGTSHTLLLTKDGKLFSCGNNDHGQLGHD---TDCLPNKRPQFISSLENYIV 91

Query: 166 VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 225
             VS    H+  +   GQVF+ G NS    GH    +    PR+++ +      Q+ +G 
Sbjct: 92  THVSCGTTHSLALTNWGQVFSWGSNSIGQLGHDTDLQTYTTPRMIKTIATKTVVQIASGQ 151

Query: 226 NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDR-PTPKSIAPLEEVGSVVQIAAGPSYMLAV 284
             +  LT  G + + G+N +GQLG G T ++  TP  +  L  +  +  IA G ++  AV
Sbjct: 152 FHSLALTNSGELFSWGANGYGQLGLGTTGEKVVTPTLVKSLAGI-PIAFIACGGNHSFAV 210

Query: 285 TGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           + +G ++ +G  +   LG  +      P+ ++T R  G+    +S GD+    L   G V
Sbjct: 211 SKSGAIFGWGKNTFGQLGLNDLVSRCFPQQLKTLRNLGVRY--ISCGDDFSAFLTQEGGV 268

Query: 345 YTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDT-GSVY 397
           +T G G  G LGHG   ++ LP  +  L      Q+   +R T   V + G +Y
Sbjct: 269 FTCGAGTFGQLGHGTCSNEILPRMVFELMGSKITQIACGRRHTLAFVPSRGKIY 322



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 71/237 (29%), Positives = 119/237 (50%), Gaps = 13/237 (5%)

Query: 237 VHTCGSNTHGQLGHGDTLDRPTPKSIAPLE----EVGSVVQIAAGPSYMLAVTGNGVVYS 292
           V+  G+  HG+LG G   D    + + P E       SV Q A G S+ L +T +G ++S
Sbjct: 3   VYCWGNTVHGELGLGGIEDE---QVLLPREMDWCHSSSVQQAACGTSHTLLLTKDGKLFS 59

Query: 293 FGSGSNFCLGHGEQ-HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 351
            G+  +  LGH        +P+ I +   +   V  VS G  H +AL + G V++WG   
Sbjct: 60  CGNNDHGQLGHDTDCLPNKRPQFISSL--ENYIVTHVSCGTTHSLALTNWGQVFSWGSNS 117

Query: 352 CGALGHGDEIDK-TLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFP 410
            G LGH  ++   T P  + ++ +   VQ+ + +  +  L ++G ++ +G  G+G LG  
Sbjct: 118 IGQLGHDTDLQTYTTPRMIKTIATKTVVQIASGQFHSLALTNSGELFSWGANGYGQLGLG 177

Query: 411 DRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTL 467
             G  +KV+ P ++ SL    ++ I+ G  H+  V+  G +FG+G N   QLG + L
Sbjct: 178 TTG--EKVVTPTLVKSLAGIPIAFIACGGNHSFAVSKSGAIFGWGKNTFGQLGLNDL 232



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 30/73 (41%), Positives = 43/73 (58%), Gaps = 3/73 (4%)

Query: 395 SVYGFGWMGFGSLGFPDRGVSD-KVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFG 453
           +VY +G    G LG    G+ D +VL PR +D   +  V Q + G  HT+++T  G+LF 
Sbjct: 2   AVYCWGNTVHGELGL--GGIEDEQVLLPREMDWCHSSSVQQAACGTSHTLLLTKDGKLFS 59

Query: 454 FGDNERAQLGHDT 466
            G+N+  QLGHDT
Sbjct: 60  CGNNDHGQLGHDT 72


>gi|345324538|ref|XP_003430830.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Ornithorhynchus
            anatinus]
          Length = 3053

 Score =  125 bits (314), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 84/281 (29%), Positives = 141/281 (50%), Gaps = 9/281 (3%)

Query: 166  VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 225
            V V++   H   +   G+V++ G+      GH + + P  RPR+VE+L+G+    + AG 
Sbjct: 2261 VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRS-PCDRPRVVESLRGIEVVDIAAGG 2319

Query: 226  NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA--AGPSYMLA 283
              +  +T+ G +++ G   +G+LGHGD+ D+  PK +  L+    V+ IA  +G +  L 
Sbjct: 2320 AHSACITVAGDLYSWGKGRYGRLGHGDSEDQLKPKLVEALQGY-RVIDIACGSGDAQTLC 2378

Query: 284  VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 343
            +T +  V+S+G G    LG G       P  I +    G+ VV+V  G +  VAL  SG 
Sbjct: 2379 LTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL--TGLGVVKVECGSQFSVALTKSGA 2436

Query: 344  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 403
            VYTWGKG    LGHG +     P  +  L+    + +           + G VY +G   
Sbjct: 2437 VYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDND 2496

Query: 404  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV 444
             G LG    G ++ + RPR++ +L+   +++++ G  HT+ 
Sbjct: 2497 EGQLG---DGTTNAIQRPRLVAALQGKKINRVACGSAHTLA 2534



 Score =  124 bits (312), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 95/310 (30%), Positives = 153/310 (49%), Gaps = 11/310 (3%)

Query: 161  SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQ 220
            +A  +++  AS   +A  +++ +VF  G N     G    ++ I  P   E L  +   Q
Sbjct: 1129 NAGSLIRKKASGLESAATIRT-KVFVWGLNDKDQLGGLKGSK-IKVPSFSETLSALNVVQ 1186

Query: 221  VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHG-DTLDRPTPKSIAPLEE-VGSVVQIAAGP 278
            V  G      +T+ G V+ CG  T+G+LG G  +   P P+ I  L   V   V + +G 
Sbjct: 1187 VAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPLPRQITALSNYVVKKVAVHSGG 1246

Query: 279  SYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
             + +A+T +G V+S+G G +  LGH  + +  +PR I+  + K I    ++ G  H  A+
Sbjct: 1247 RHAMALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIR--DIACGSSHSAAI 1304

Query: 339  DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVC--ARKRKTFVLVDTGSV 396
             SSG +YTWG G  G LGHGD   +  P+ +  L  H  +QV   +R  +T  L D G V
Sbjct: 1305 TSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLV 1364

Query: 397  YGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGD 456
            + +G   FG LG   RG S+    P+ ++ L    V QI  G   ++ +T  G ++ +G 
Sbjct: 1365 FSWGDGDFGKLG---RGGSEGCNVPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGR 1421

Query: 457  NERAQLGHDT 466
             +  +L  D+
Sbjct: 1422 GDFGELRPDS 1431



 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 83/269 (30%), Positives = 132/269 (49%), Gaps = 6/269 (2%)

Query: 207  PRLVEALKGVPCKQV--TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP 264
            P L+E+++ V  K+V   +G      L+  G V++ G    G+LGHG+      P+ +  
Sbjct: 2247 PTLLESIQHVFVKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVVES 2306

Query: 265  LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH 324
            L  +  VV IAAG ++   +T  G +YS+G G    LGHG+  D+L+P+ ++  +   + 
Sbjct: 2307 LRGI-EVVDIAAGGAHSACITVAGDLYSWGKGRYGRLGHGDSEDQLKPKLVEALQGYRVI 2365

Query: 325  VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARK 384
             +   +GD   + L     V++WG G  G LG G      +P  + SL     V+V    
Sbjct: 2366 DIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGS 2425

Query: 385  RKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV 444
            + +  L  +G+VY +G   +  LG    G  D V RPR +  L+   V  I+TG  H V 
Sbjct: 2426 QFSVALTKSGAVYTWGKGDYHRLG---HGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 2482

Query: 445  VTDRGRLFGFGDNERAQLGHDTLRGCLEP 473
             T+ G ++ +GDN+  QLG  T      P
Sbjct: 2483 CTEDGEVYTWGDNDEGQLGDGTTNAIQRP 2511



 Score =  115 bits (289), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 93/311 (29%), Positives = 150/311 (48%), Gaps = 24/311 (7%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V Q++ +E     + ++G+V+    NS       DT      P+LV+ L      +V A 
Sbjct: 158 VTQIACAEKRFLILSRNGRVYVQAYNS-------DT----LGPQLVQGLASRNIVKVAAH 206

Query: 225 LNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGS-VVQIAAGPS 279
            +   +L +   G V + G    G+LGHGDT+    PK I+ L  ++ G  VV IA G +
Sbjct: 207 SDGHHYLALAATGEVFSWGCGDGGRLGHGDTVPLEEPKMISALSGKQAGKHVVHIACGST 266

Query: 280 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS--AGDEHVVA 337
           Y  A+T  G +Y++G G+   LGHG   D+  P  +     KG+ V+ VS  +GD   +A
Sbjct: 267 YSAAITAEGELYTWGRGNYGRLGHGSSEDQTIPMLVTGL--KGLKVIDVSCGSGDAQTLA 324

Query: 338 LDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVY 397
           +  +G V++WG G  G LG G       P+ +  L+    V+V    + +  L   G VY
Sbjct: 325 VTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDIVKVRCGSQFSIALTKDGQVY 384

Query: 398 GFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDN 457
            +G      LG    G  + V  P++L+ L+   V  ++ G  H + +T+   +  +G N
Sbjct: 385 SWGKGDNQRLG---HGTEEHVRYPKLLEGLQGKKVVDVAAGSTHCLALTEDSEVHSWGSN 441

Query: 458 ERAQLGHDTLR 468
           ++ Q   DTLR
Sbjct: 442 DQCQ-HFDTLR 451



 Score =  102 bits (253), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 76/251 (30%), Positives = 118/251 (47%), Gaps = 13/251 (5%)

Query: 232  TIRGHVHTCGSNTHGQLG--HGDTLDRPT-PKSIAPLEEVGSVVQIAAGPSYMLAVTGNG 288
            TIR  V   G N   QLG   G  +  P+  ++++ L    +VVQ+A G   + AVT  G
Sbjct: 1146 TIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSAL----NVVQVAGGSKSLFAVTVEG 1201

Query: 289  VVYSFGSGSNFCLGHGEQHDELQ-PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 347
             VY+ G  +N  LG G     +  PR I       +  V V +G  H +AL   G V++W
Sbjct: 1202 KVYACGEATNGRLGLGISSGTVPLPRQITALSNYVVKKVAVHSGGRHAMALTVDGKVFSW 1261

Query: 348  GKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSL 407
            G+G  G LGH   ++   P  + +LK+     +      +  +  +G +Y +G   +G L
Sbjct: 1262 GEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGELYTWGLGEYGRL 1321

Query: 408  GFPDRGVSDKVLRPRILDSLRAHHVSQISTGL--YHTVVVTDRGRLFGFGDNERAQLGHD 465
            G  D       L+P+++  L  H V Q++ G     T+ +TD G +F +GD +  +LG  
Sbjct: 1322 GHGDNTTQ---LKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG 1378

Query: 466  TLRGCLEPTEI 476
               GC  P  I
Sbjct: 1379 GSEGCNVPQNI 1389



 Score = 99.8 bits (247), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 81/265 (30%), Positives = 126/265 (47%), Gaps = 12/265 (4%)

Query: 96   FLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFT 155
             L+S++H    V+  A N   + G++   L S   V+S G +  G LGHG   + C    
Sbjct: 2249 LLESIQHV--FVKKVAVN---SGGKHCLALSSEGEVYSWGEAEDGKLGHG-NRSPCDRPR 2302

Query: 156  RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 215
             +       VV ++A   H+A +  +G +++ G       GH D+   + +P+LVEAL+G
Sbjct: 2303 VVESLRGIEVVDIAAGGAHSACITVAGDLYSWGKGRYGRLGHGDSEDQL-KPKLVEALQG 2361

Query: 216  VPCKQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
                 +   +G   T  LT    V + G   +G+LG G +     P  I  L  +G VV+
Sbjct: 2362 YRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLG-VVK 2420

Query: 274  IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
            +  G  + +A+T +G VY++G G    LGHG      +PR +Q    +G  V+ ++ G  
Sbjct: 2421 VECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGL--QGKKVIAIATGSL 2478

Query: 334  HVVALDSSGYVYTWGKGYCGALGHG 358
            H V     G VYTWG    G LG G
Sbjct: 2479 HCVCCTEDGEVYTWGDNDEGQLGDG 2503



 Score = 99.0 bits (245), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 80/275 (29%), Positives = 130/275 (47%), Gaps = 23/275 (8%)

Query: 103 SSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHG-------PETTQCVSFT 155
           S +IV+ +A     + G ++  L +   VFS G    G LGHG       P+    +S  
Sbjct: 197 SRNIVKVAAH----SDGHHYLALAATGEVFSWGCGDGGRLGHGDTVPLEEPKMISALSGK 252

Query: 156 RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 215
           +    +  HVV ++    ++A +   G+++T G  +    GH  +      P LV  LKG
Sbjct: 253 Q----AGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDQTI-PMLVTGLKG 307

Query: 216 VPCKQVTAGLNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
           +    V+ G      L +   G V + G   +G+LG G +    TPK I  L+++  +V+
Sbjct: 308 LKVIDVSCGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL-DIVK 366

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           +  G  + +A+T +G VYS+G G N  LGHG +     P+ ++    +G  VV V+AG  
Sbjct: 367 VRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGL--QGKKVVDVAAGST 424

Query: 334 HVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEP 368
           H +AL     V++WG        H D +  T P+P
Sbjct: 425 HCLALTEDSEVHSWGSN--DQCQHFDTLRITKPQP 457



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 74/247 (29%), Positives = 125/247 (50%), Gaps = 12/247 (4%)

Query: 235  GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
            G ++  G N  GQLG   G  +  PTP +++A L  V    Q+  G   + AVT +G +Y
Sbjct: 2171 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPV----QLIGGEQTLFAVTADGKLY 2226

Query: 292  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 351
            + G G+   LG G       P  +++ +   +  V V++G +H +AL S G VY+WG+  
Sbjct: 2227 ATGYGAGGRLGIGGTESVSTPTLLESIQHVFVKKVAVNSGGKHCLALSSEGEVYSWGEAE 2286

Query: 352  CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 411
             G LGHG+      P  + SL+    V + A    +  +   G +Y +G   +G LG  D
Sbjct: 2287 DGKLGHGNRSPCDRPRVVESLRGIEVVDIAAGGAHSACITVAGDLYSWGKGRYGRLGHGD 2346

Query: 412  RGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG 469
               S+  L+P+++++L+ + V  I+  +G   T+ +TD   ++ +GD +  +LG     G
Sbjct: 2347 ---SEDQLKPKLVEALQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDG 2403

Query: 470  CLEPTEI 476
            C  P +I
Sbjct: 2404 CKVPMKI 2410



 Score = 76.6 bits (187), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 60/219 (27%), Positives = 100/219 (45%), Gaps = 21/219 (9%)

Query: 271 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 330
           V QIA      L ++ NG VY     S          D L P+ +Q    + I  V   +
Sbjct: 158 VTQIACAEKRFLILSRNGRVYVQAYNS----------DTLGPQLVQGLASRNIVKVAAHS 207

Query: 331 GDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLA----VQVCARKRK 386
              H +AL ++G V++WG G  G LGHGD +    P+ +S+L    A    V +      
Sbjct: 208 DGHHYLALAATGEVFSWGCGDGGRLGHGDTVPLEEPKMISALSGKQAGKHVVHIACGSTY 267

Query: 387 TFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVV 444
           +  +   G +Y +G   +G LG    G S+    P ++  L+   V  +S  +G   T+ 
Sbjct: 268 SAAITAEGELYTWGRGNYGRLG---HGSSEDQTIPMLVTGLKGLKVIDVSCGSGDAQTLA 324

Query: 445 VTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQEMEE 483
           VT+ G+++ +GD +  +LG     GC  P    I+++++
Sbjct: 325 VTENGQVWSWGDGDYGKLGRGGSDGCKTPK--LIEKLQD 361



 Score = 64.7 bits (156), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 56/180 (31%), Positives = 82/180 (45%), Gaps = 5/180 (2%)

Query: 119  GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
            GR+   L  +  VFS G    G LGH      C     I       +  ++   +H+A +
Sbjct: 1246 GRHAMALTVDGKVFSWGEGDDGKLGHF-SRMNCDKPRLIEALKTKRIRDIACGSSHSAAI 1304

Query: 179  LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN--FTGFLTIRGH 236
              SG+++T G       GH D N    +P++V+ L G    QV  G     T  LT  G 
Sbjct: 1305 TSSGELYTWGLGEYGRLGHGD-NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 1363

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 296
            V + G    G+LG G +     P++I  L   G V QI  G  + LA+T +GVV+++G G
Sbjct: 1364 VFSWGDGDFGKLGRGGSEGCNVPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTWGRG 1422



 Score = 55.1 bits (131), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 49/167 (29%), Positives = 76/167 (45%), Gaps = 4/167 (2%)

Query: 118  TGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
            +G   TL L  + +V+S G    G LG G  +  C    +I+  +   VV+V      + 
Sbjct: 2371 SGDAQTLCLTDDDTVWSWGDGDYGKLGRG-GSDGCKVPMKIDSLTGLGVVKVECGSQFSV 2429

Query: 177  FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
             + +SG V+T G       GH   +  + RPR V+ L+G     +  G       T  G 
Sbjct: 2430 ALTKSGAVYTWGKGDYHRLGHGSDDH-VRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGE 2488

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
            V+T G N  GQLG G T     P+ +A L+    + ++A G ++ LA
Sbjct: 2489 VYTWGDNDEGQLGDGTTNAIQRPRLVAALQG-KKINRVACGSAHTLA 2534



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 51/169 (30%), Positives = 76/169 (44%), Gaps = 8/169 (4%)

Query: 118 TGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
           +G   TL ++ N  V+S G    G LG G  +  C +   I       +V+V      + 
Sbjct: 317 SGDAQTLAVTENGQVWSWGDGDYGKLGRG-GSDGCKTPKLIEKLQDLDIVKVRCGSQFSI 375

Query: 177 FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
            + + GQV++ G   +   GH  T   +  P+L+E L+G     V AG      LT    
Sbjct: 376 ALTKDGQVYSWGKGDNQRLGH-GTEEHVRYPKLLEGLQGKKVVDVAAGSTHCLALTEDSE 434

Query: 237 VHTCGSNTHGQLGHGDTL--DRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
           VH+ GSN   Q  H DTL   +P P ++  L +   +V IA GP+   A
Sbjct: 435 VHSWGSNDQCQ--HFDTLRITKPQPSALPGL-DTKHIVGIACGPAQSFA 480



 Score = 52.8 bits (125), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 36/144 (25%), Positives = 70/144 (48%), Gaps = 5/144 (3%)

Query: 332  DEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 391
            D+  ++   SG +Y WG  + G LG  +     +P P  +L +   VQ+   ++  F + 
Sbjct: 2161 DDWTLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVT 2220

Query: 392  DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRG 449
              G +Y     G+G+ G    G ++ V  P +L+S++   V +++  +G  H + ++  G
Sbjct: 2221 ADGKLYA---TGYGAGGRLGIGGTESVSTPTLLESIQHVFVKKVAVNSGGKHCLALSSEG 2277

Query: 450  RLFGFGDNERAQLGHDTLRGCLEP 473
             ++ +G+ E  +LGH     C  P
Sbjct: 2278 EVYSWGEAEDGKLGHGNRSPCDRP 2301



 Score = 40.0 bits (92), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 66/252 (26%), Positives = 98/252 (38%), Gaps = 34/252 (13%)

Query: 116  ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
            I  G  H+  I++S  +++ G    G LGHG  TTQ +    +       V+QV+     
Sbjct: 1294 IACGSSHSAAITSSGELYTWGLGEYGRLGHGDNTTQ-LKPKMVKVLLGHRVIQVACGSRD 1352

Query: 175  AA--FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            A    +   G VF+ GD      G R  +     P+ +E L G    Q+  G  F+  LT
Sbjct: 1353 AQTLALTDEGLVFSWGDGDFGKLG-RGGSEGCNVPQNIERLNGQGVCQIECGAQFSLALT 1411

Query: 233  IRGHVHTCGSNTHGQL-------GHGDTLDR-----------PTP--KSIAPLEEVGSVV 272
              G V T G    G+L         G+  DR           P P    ++P E    +V
Sbjct: 1412 KSGVVWTWGRGDFGELRPDSHIVQSGNVSDRMRVRNKGACLIPLPFFGLVSPREMGWEIV 1471

Query: 273  QIA--AGPSYMLAVTGNG-----VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHV 325
             I   +G S      G        VY++G   +   G+G      +P  +Q    +G  +
Sbjct: 1472 GIERNSGISSFCGQQGERRERQLEVYAWGDNDHGQQGNGTTTVNRKPTLVQGL--EGQKI 1529

Query: 326  VRVSAGDEHVVA 337
             RV+ G  H VA
Sbjct: 1530 TRVACGSSHSVA 1541


>gi|327273047|ref|XP_003221294.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6-like [Anolis
           carolinensis]
          Length = 1081

 Score =  125 bits (314), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 84/251 (33%), Positives = 128/251 (50%), Gaps = 8/251 (3%)

Query: 221 VTAGLNFTGFLTIRGHVHTCGSNTHGQLGH----GDTLDRPTPKSIAPLEEVGSVVQIAA 276
           V  G   T  L   G V +CG N+ GQLG     G       P+ I  LE    VV ++ 
Sbjct: 42  VACGERHTLLLRDDGGVASCGDNSRGQLGRRLPSGQEKRSYGPELIQALE-TQKVVHVSC 100

Query: 277 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVV 336
           G  + LAV   G VYS+G+G+   LG GE  D L P+ I    +    V++V+ G +H +
Sbjct: 101 GKEHSLAVCNKGRVYSWGAGTFGQLGTGELGDRLIPKTINALSK--YKVIQVACGHDHSI 158

Query: 337 ALDSSGYVYTWGKGYCGALGHGDEID-KTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGS 395
           AL + G +++WG+   G LG G +I  +  P+ +S+L      QV A    +F L  +G 
Sbjct: 159 ALTNDGRIFSWGQNIHGQLGLGKDISSQASPQQVSALDGIPLAQVAAGGAHSFALSLSGV 218

Query: 396 VYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFG 455
           VYG+G      LG       +++ +P  + +LR+  V+ +S G  HT V+T  G ++ FG
Sbjct: 219 VYGWGRNNAHQLGLSQAKPKEQIFKPYSIAALRSLDVAFVSCGAEHTAVLTQNGSVYTFG 278

Query: 456 DNERAQLGHDT 466
           D+   QLG ++
Sbjct: 279 DDSAGQLGRNS 289



 Score =  114 bits (286), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 95/304 (31%), Positives = 146/304 (48%), Gaps = 14/304 (4%)

Query: 160 PSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHR---DTNRPIFRPRLVEALKGV 216
           P+   VV V+  E H   +   G V +CGDNS    G R      +  + P L++AL+  
Sbjct: 34  PADQAVVLVACGERHTLLLRDDGGVASCGDNSRGQLGRRLPSGQEKRSYGPELIQALETQ 93

Query: 217 PCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA 276
               V+ G   +  +  +G V++ G+ T GQLG G+  DR  PK+I  L +   V+Q+A 
Sbjct: 94  KVVHVSCGKEHSLAVCNKGRVYSWGAGTFGQLGTGELGDRLIPKTINALSKY-KVIQVAC 152

Query: 277 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ-HDELQPRAIQTFRRKGIHVVRVSAGDEHV 335
           G  + +A+T +G ++S+G   +  LG G+    +  P+ +      GI + +V+AG  H 
Sbjct: 153 GHDHSIALTNDGRIFSWGQNIHGQLGLGKDISSQASPQQVSAL--DGIPLAQVAAGGAHS 210

Query: 336 VALDSSGYVYTWGKGYCGALGHGDEIDKTL---PEPLSSLKSHLAVQVCARKRKTFVLVD 392
            AL  SG VY WG+     LG      K     P  +++L+S     V      T VL  
Sbjct: 211 FALSLSGVVYGWGRNNAHQLGLSQAKPKEQIFKPYSIAALRSLDVAFVSCGAEHTAVLTQ 270

Query: 393 TGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV-VTDRGRL 451
            GSVY FG    G LG      S     P+ ++ +    VS ++ G YHT+V ++  G+L
Sbjct: 271 NGSVYTFGDDSAGQLG--RNSSSSPKFGPQKVEWIDG-PVSLLACGSYHTLVRISTSGQL 327

Query: 452 FGFG 455
             FG
Sbjct: 328 LSFG 331



 Score = 88.2 bits (217), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 69/238 (28%), Positives = 117/238 (49%), Gaps = 19/238 (7%)

Query: 237 VHTCGSNTHGQLG-------HGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 289
           ++  G  + GQLG        G    RP P+  AP ++  +VV +A G  + L +  +G 
Sbjct: 2   LYCWGEGSAGQLGLGKGEGVSGPVPFRPGPR--APADQ--AVVLVACGERHTLLLRDDGG 57

Query: 290 VYSFGSGSNFCLGH----GEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVY 345
           V S G  S   LG     G++     P  IQ    +   VV VS G EH +A+ + G VY
Sbjct: 58  VASCGDNSRGQLGRRLPSGQEKRSYGPELIQALETQ--KVVHVSCGKEHSLAVCNKGRVY 115

Query: 346 TWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFG 405
           +WG G  G LG G+  D+ +P+ +++L  +  +QV      +  L + G ++ +G    G
Sbjct: 116 SWGAGTFGQLGTGELGDRLIPKTINALSKYKVIQVACGHDHSIALTNDGRIFSWGQNIHG 175

Query: 406 SLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 463
            LG   + +S +   P+ + +L    ++Q++ G  H+  ++  G ++G+G N   QLG
Sbjct: 176 QLGL-GKDISSQA-SPQQVSALDGIPLAQVAAGGAHSFALSLSGVVYGWGRNNAHQLG 231



 Score = 72.4 bits (176), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 68/243 (27%), Positives = 113/243 (46%), Gaps = 11/243 (4%)

Query: 114 MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           + ++ G+ H+L + N   V+S G+   G LG G    + +  T IN  S   V+QV+   
Sbjct: 96  VHVSCGKEHSLAVCNKGRVYSWGAGTFGQLGTGELGDRLIPKT-INALSKYKVIQVACGH 154

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
           +H+  +   G++F+ G N     G          P+ V AL G+P  QV AG   +  L+
Sbjct: 155 DHSIALTNDGRIFSWGQNIHGQLGLGKDISSQASPQQVSALDGIPLAQVAAGGAHSFALS 214

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRP---TPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 289
           + G V+  G N   QLG      +     P SIA L  +  V  ++ G  +   +T NG 
Sbjct: 215 LSGVVYGWGRNNAHQLGLSQAKPKEQIFKPYSIAALRSL-DVAFVSCGAEHTAVLTQNGS 273

Query: 290 VYSFGSGSNFCLG-HGEQHDELQPRAIQTFRRKGIHVVRVSAGDEH-VVALDSSGYVYTW 347
           VY+FG  S   LG +     +  P+ ++        V  ++ G  H +V + +SG + ++
Sbjct: 274 VYTFGDDSAGQLGRNSSSSPKFGPQKVEWIDGP---VSLLACGSYHTLVRISTSGQLLSF 330

Query: 348 GKG 350
           G+G
Sbjct: 331 GRG 333



 Score = 50.1 bits (118), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 41/139 (29%), Positives = 59/139 (42%), Gaps = 7/139 (5%)

Query: 344 VYTWGKGYCGALGHGDEIDKTLPEPLS----SLKSHLAVQVCARKRKTFVLVDTGSVYGF 399
           +Y WG+G  G LG G     + P P      +      V V   +R T +L D G V   
Sbjct: 2   LYCWGEGSAGQLGLGKGEGVSGPVPFRPGPRAPADQAVVLVACGERHTLLLRDDGGVASC 61

Query: 400 GWMGFGSLG--FPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDN 457
           G    G LG   P  G   +   P ++ +L    V  +S G  H++ V ++GR++ +G  
Sbjct: 62  GDNSRGQLGRRLPS-GQEKRSYGPELIQALETQKVVHVSCGKEHSLAVCNKGRVYSWGAG 120

Query: 458 ERAQLGHDTLRGCLEPTEI 476
              QLG   L   L P  I
Sbjct: 121 TFGQLGTGELGDRLIPKTI 139


>gi|426255638|ref|XP_004021455.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
           [Ovis aries]
          Length = 1057

 Score =  125 bits (314), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 88/276 (31%), Positives = 140/276 (50%), Gaps = 10/276 (3%)

Query: 204 IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 263
           +  PR  +       + V  GL  T F+   G V+TCG N  GQLGH  +  R  P+ + 
Sbjct: 22  VLEPRKSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKS--RKKPEQVV 79

Query: 264 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH-GEQHDELQPRAIQTFRRKG 322
            L+   ++V ++ G ++ LA+   G VY++G  S+  LG  G +     PR I++     
Sbjct: 80  ALD-AQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSL--SD 136

Query: 323 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTL-PEPLSSLKSHLAVQVC 381
           I +V+V+ G  H +AL  +  V+ WG+   G LG G +  K   P+ + SL     +Q+ 
Sbjct: 137 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQIA 196

Query: 382 ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYH 441
           A    +FVL  +G+++G+G   FG LG  D   +D+ + P +L SLR   +  I  G  H
Sbjct: 197 AGGAHSFVLTLSGAIFGWGRNKFGQLGLNDE--NDRYV-PNLLKSLRTQKIVYICCGEDH 253

Query: 442 TVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF 477
           T  +T  G +F FG     QLGH++    + P ++F
Sbjct: 254 TAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVF 289



 Score =  122 bits (307), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 103/333 (30%), Positives = 154/333 (46%), Gaps = 13/333 (3%)

Query: 135 GSSLCGVLGHGPETTQCVSFTRI-NFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSF 193
           G++  G LG G    + V   R  +F     V  V     H  FVL  G V+TCG N   
Sbjct: 5   GNASFGQLGLGGIDEEIVLEPRKSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLG 64

Query: 194 CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGH-GD 252
             GH  + +   +P  V AL       V+ G   T  L  +G V+  G ++ GQLG  G 
Sbjct: 65  QLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGS 121

Query: 253 TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHG-EQHDELQ 311
                 P++I  L ++  +VQ+A G  + LA++    V+ +G      LG G +   +  
Sbjct: 122 EECIRVPRNIKSLSDI-QIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQAS 180

Query: 312 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSS 371
           P+ I++    GI  ++++AG  H   L  SG ++ WG+   G LG  DE D+ +P  L S
Sbjct: 181 PQLIKSLL--GIPFMQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKS 238

Query: 372 LKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHH 431
           L++   V +C  +  T  L   G V+ FG  G+G LG      +   + PR +  L    
Sbjct: 239 LRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG---HNSTSHEINPRKVFELMGSI 295

Query: 432 VSQISTGLYHT-VVVTDRGRLFGFGDNERAQLG 463
           V+QI+ G  HT   V   GR++ FG     QLG
Sbjct: 296 VTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 81/291 (27%), Positives = 138/291 (47%), Gaps = 8/291 (2%)

Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 179
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V VS  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVSCGEAHTLALN 100

Query: 180 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 239
             GQV+  G +S    G   +   I  PR +++L  +   QV  G   +  L+    V  
Sbjct: 101 DKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFC 160

Query: 240 CGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
            G N +GQLG G D   + +P+ I  L  +   +QIAAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKYGQLGLGIDCKKQASPQLIKSLLGI-PFMQIAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 299 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 358
             LG  +++D   P  +++ R + I  V +  G++H  AL   G V+T+G G  G LGH 
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRTQKI--VYICCGEDHTAALTKEGGVFTFGAGGYGQLGHN 277

Query: 359 DEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLG 408
               +  P  +  L   +  Q+ C R+  +  +  +G +Y FG  G G LG
Sbjct: 278 STSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 83/274 (30%), Positives = 132/274 (48%), Gaps = 10/274 (3%)

Query: 98  QSVEHSSDIVETSAGNM-QITTGRYHTLLISNS-SVFSCGSSLCGVLGH-GPETTQCVSF 154
           +S +    +V   A N+  ++ G  HTL +++   V++ G    G LG  G E  +C+  
Sbjct: 70  KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSE--ECIRV 127

Query: 155 TR-INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEAL 213
            R I   S   +VQV+    H+  + ++ +VF  G N     G     +    P+L+++L
Sbjct: 128 PRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQASPQLIKSL 187

Query: 214 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
            G+P  Q+ AG   +  LT+ G +   G N  GQLG  D  DR  P  +  L     +V 
Sbjct: 188 LGIPFMQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLR-TQKIVY 246

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           I  G  +  A+T  G V++FG+G    LGH     E+ PR +  F   G  V +++ G +
Sbjct: 247 ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQ 304

Query: 334 HVVA-LDSSGYVYTWGKGYCGALGHGDEIDKTLP 366
           H  A + SSG +Y++G G  G LG G   ++  P
Sbjct: 305 HTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338



 Score = 79.7 bits (195), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 76/251 (30%), Positives = 119/251 (47%), Gaps = 17/251 (6%)

Query: 70  IYA-GMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLISN 128
           +YA G+  + Q+ LL       +  +R  ++++  SDI       +Q+  G YH+L +S 
Sbjct: 105 VYAWGLDSDGQLGLLGS-----EECIRVPRNIKSLSDI-----QIVQVACGYYHSLALSK 154

Query: 129 SS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTC 187
           +S VF  G +  G LG G +  +  S   I        +Q++A   H+  +  SG +F  
Sbjct: 155 ASEVFCWGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQIAAGGAHSFVLTLSGAIFGW 214

Query: 188 GDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQ 247
           G N     G  D N   + P L+++L+      +  G + T  LT  G V T G+  +GQ
Sbjct: 215 GRNKFGQLGLNDENDR-YVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQ 273

Query: 248 LGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVVYSFGSGSNFCLGHGE 305
           LGH  T     P+ +   E +GS+V QIA G  +  A V  +G +YSFG G N  LG G 
Sbjct: 274 LGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGS 331

Query: 306 QHDELQPRAIQ 316
             +   P  ++
Sbjct: 332 TSNRKSPFTVK 342


>gi|426255640|ref|XP_004021456.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
           [Ovis aries]
          Length = 1049

 Score =  125 bits (314), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 88/276 (31%), Positives = 140/276 (50%), Gaps = 10/276 (3%)

Query: 204 IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 263
           +  PR  +       + V  GL  T F+   G V+TCG N  GQLGH  +  R  P+ + 
Sbjct: 22  VLEPRKSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKS--RKKPEQVV 79

Query: 264 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH-GEQHDELQPRAIQTFRRKG 322
            L+   ++V ++ G ++ LA+   G VY++G  S+  LG  G +     PR I++     
Sbjct: 80  ALD-AQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSL--SD 136

Query: 323 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTL-PEPLSSLKSHLAVQVC 381
           I +V+V+ G  H +AL  +  V+ WG+   G LG G +  K   P+ + SL     +Q+ 
Sbjct: 137 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQIA 196

Query: 382 ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYH 441
           A    +FVL  +G+++G+G   FG LG  D   +D+ + P +L SLR   +  I  G  H
Sbjct: 197 AGGAHSFVLTLSGAIFGWGRNKFGQLGLNDE--NDRYV-PNLLKSLRTQKIVYICCGEDH 253

Query: 442 TVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF 477
           T  +T  G +F FG     QLGH++    + P ++F
Sbjct: 254 TAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVF 289



 Score =  122 bits (307), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 103/333 (30%), Positives = 154/333 (46%), Gaps = 13/333 (3%)

Query: 135 GSSLCGVLGHGPETTQCVSFTRI-NFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSF 193
           G++  G LG G    + V   R  +F     V  V     H  FVL  G V+TCG N   
Sbjct: 5   GNASFGQLGLGGIDEEIVLEPRKSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLG 64

Query: 194 CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGH-GD 252
             GH  + +   +P  V AL       V+ G   T  L  +G V+  G ++ GQLG  G 
Sbjct: 65  QLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGS 121

Query: 253 TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHG-EQHDELQ 311
                 P++I  L ++  +VQ+A G  + LA++    V+ +G      LG G +   +  
Sbjct: 122 EECIRVPRNIKSLSDI-QIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQAS 180

Query: 312 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSS 371
           P+ I++    GI  ++++AG  H   L  SG ++ WG+   G LG  DE D+ +P  L S
Sbjct: 181 PQLIKSLL--GIPFMQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKS 238

Query: 372 LKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHH 431
           L++   V +C  +  T  L   G V+ FG  G+G LG      +   + PR +  L    
Sbjct: 239 LRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG---HNSTSHEINPRKVFELMGSI 295

Query: 432 VSQISTGLYHT-VVVTDRGRLFGFGDNERAQLG 463
           V+QI+ G  HT   V   GR++ FG     QLG
Sbjct: 296 VTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 81/291 (27%), Positives = 138/291 (47%), Gaps = 8/291 (2%)

Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 179
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V VS  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVSCGEAHTLALN 100

Query: 180 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 239
             GQV+  G +S    G   +   I  PR +++L  +   QV  G   +  L+    V  
Sbjct: 101 DKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFC 160

Query: 240 CGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
            G N +GQLG G D   + +P+ I  L  +   +QIAAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKYGQLGLGIDCKKQASPQLIKSLLGI-PFMQIAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 299 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 358
             LG  +++D   P  +++ R + I  V +  G++H  AL   G V+T+G G  G LGH 
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRTQKI--VYICCGEDHTAALTKEGGVFTFGAGGYGQLGHN 277

Query: 359 DEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLG 408
               +  P  +  L   +  Q+ C R+  +  +  +G +Y FG  G G LG
Sbjct: 278 STSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 83/274 (30%), Positives = 132/274 (48%), Gaps = 10/274 (3%)

Query: 98  QSVEHSSDIVETSAGNM-QITTGRYHTLLISNS-SVFSCGSSLCGVLGH-GPETTQCVSF 154
           +S +    +V   A N+  ++ G  HTL +++   V++ G    G LG  G E  +C+  
Sbjct: 70  KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSE--ECIRV 127

Query: 155 TR-INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEAL 213
            R I   S   +VQV+    H+  + ++ +VF  G N     G     +    P+L+++L
Sbjct: 128 PRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQASPQLIKSL 187

Query: 214 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
            G+P  Q+ AG   +  LT+ G +   G N  GQLG  D  DR  P  +  L     +V 
Sbjct: 188 LGIPFMQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLR-TQKIVY 246

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           I  G  +  A+T  G V++FG+G    LGH     E+ PR +  F   G  V +++ G +
Sbjct: 247 ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQ 304

Query: 334 HVVA-LDSSGYVYTWGKGYCGALGHGDEIDKTLP 366
           H  A + SSG +Y++G G  G LG G   ++  P
Sbjct: 305 HTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338



 Score = 79.7 bits (195), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 76/251 (30%), Positives = 119/251 (47%), Gaps = 17/251 (6%)

Query: 70  IYA-GMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLISN 128
           +YA G+  + Q+ LL       +  +R  ++++  SDI       +Q+  G YH+L +S 
Sbjct: 105 VYAWGLDSDGQLGLLGS-----EECIRVPRNIKSLSDI-----QIVQVACGYYHSLALSK 154

Query: 129 SS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTC 187
           +S VF  G +  G LG G +  +  S   I        +Q++A   H+  +  SG +F  
Sbjct: 155 ASEVFCWGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQIAAGGAHSFVLTLSGAIFGW 214

Query: 188 GDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQ 247
           G N     G  D N   + P L+++L+      +  G + T  LT  G V T G+  +GQ
Sbjct: 215 GRNKFGQLGLNDENDR-YVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQ 273

Query: 248 LGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVVYSFGSGSNFCLGHGE 305
           LGH  T     P+ +   E +GS+V QIA G  +  A V  +G +YSFG G N  LG G 
Sbjct: 274 LGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGS 331

Query: 306 QHDELQPRAIQ 316
             +   P  ++
Sbjct: 332 TSNRKSPFTVK 342


>gi|164448576|ref|NP_001070362.2| probable E3 ubiquitin-protein ligase HERC4 [Bos taurus]
 gi|296472143|tpg|DAA14258.1| TPA: hect domain and RLD 4 [Bos taurus]
          Length = 1057

 Score =  125 bits (314), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 88/276 (31%), Positives = 140/276 (50%), Gaps = 10/276 (3%)

Query: 204 IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 263
           +  PR  +       + V  GL  T F+   G V+TCG N  GQLGH  +  R  P+ + 
Sbjct: 22  VLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKS--RKKPEQVV 79

Query: 264 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH-GEQHDELQPRAIQTFRRKG 322
            L+   ++V ++ G ++ LA+   G VY++G  S+  LG  G +     PR I++     
Sbjct: 80  ALD-AQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSL--SD 136

Query: 323 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTL-PEPLSSLKSHLAVQVC 381
           I +V+V+ G  H +AL  +  V+ WG+   G LG G +  K   P+ + SL     +Q+ 
Sbjct: 137 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQIA 196

Query: 382 ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYH 441
           A    +FVL  +G+++G+G   FG LG  D   +D+ + P +L SLR   +  I  G  H
Sbjct: 197 AGGAHSFVLTLSGAIFGWGRNKFGQLGLNDE--NDRYV-PNLLKSLRTQKIVYICCGEDH 253

Query: 442 TVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF 477
           T  +T  G +F FG     QLGH++    + P ++F
Sbjct: 254 TAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVF 289



 Score =  122 bits (306), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 103/333 (30%), Positives = 154/333 (46%), Gaps = 13/333 (3%)

Query: 135 GSSLCGVLGHGPETTQCVSFTRI-NFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSF 193
           G++  G LG G    + V   R  +F     V  V     H  FVL  G V+TCG N   
Sbjct: 5   GNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLG 64

Query: 194 CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGH-GD 252
             GH  + +   +P  V AL       V+ G   T  L  +G V+  G ++ GQLG  G 
Sbjct: 65  QLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGS 121

Query: 253 TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHG-EQHDELQ 311
                 P++I  L ++  +VQ+A G  + LA++    V+ +G      LG G +   +  
Sbjct: 122 EECIRVPRNIKSLSDI-QIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQAS 180

Query: 312 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSS 371
           P+ I++    GI  ++++AG  H   L  SG ++ WG+   G LG  DE D+ +P  L S
Sbjct: 181 PQLIKSLL--GIPFMQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKS 238

Query: 372 LKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHH 431
           L++   V +C  +  T  L   G V+ FG  G+G LG      +   + PR +  L    
Sbjct: 239 LRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG---HNSTSHEINPRKVFELMGSI 295

Query: 432 VSQISTGLYHT-VVVTDRGRLFGFGDNERAQLG 463
           V+QI+ G  HT   V   GR++ FG     QLG
Sbjct: 296 VTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 81/291 (27%), Positives = 138/291 (47%), Gaps = 8/291 (2%)

Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 179
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V VS  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVSCGEAHTLALN 100

Query: 180 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 239
             GQV+  G +S    G   +   I  PR +++L  +   QV  G   +  L+    V  
Sbjct: 101 DKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFC 160

Query: 240 CGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
            G N +GQLG G D   + +P+ I  L  +   +QIAAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKYGQLGLGIDCKKQASPQLIKSLLGI-PFMQIAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 299 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 358
             LG  +++D   P  +++ R + I  V +  G++H  AL   G V+T+G G  G LGH 
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRTQKI--VYICCGEDHTAALTKEGGVFTFGAGGYGQLGHN 277

Query: 359 DEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLG 408
               +  P  +  L   +  Q+ C R+  +  +  +G +Y FG  G G LG
Sbjct: 278 STSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 83/274 (30%), Positives = 132/274 (48%), Gaps = 10/274 (3%)

Query: 98  QSVEHSSDIVETSAGNM-QITTGRYHTLLISNS-SVFSCGSSLCGVLGH-GPETTQCVSF 154
           +S +    +V   A N+  ++ G  HTL +++   V++ G    G LG  G E  +C+  
Sbjct: 70  KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSE--ECIRV 127

Query: 155 TR-INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEAL 213
            R I   S   +VQV+    H+  + ++ +VF  G N     G     +    P+L+++L
Sbjct: 128 PRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQASPQLIKSL 187

Query: 214 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
            G+P  Q+ AG   +  LT+ G +   G N  GQLG  D  DR  P  +  L     +V 
Sbjct: 188 LGIPFMQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLR-TQKIVY 246

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           I  G  +  A+T  G V++FG+G    LGH     E+ PR +  F   G  V +++ G +
Sbjct: 247 ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQ 304

Query: 334 HVVA-LDSSGYVYTWGKGYCGALGHGDEIDKTLP 366
           H  A + SSG +Y++G G  G LG G   ++  P
Sbjct: 305 HTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338



 Score = 79.7 bits (195), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 76/251 (30%), Positives = 119/251 (47%), Gaps = 17/251 (6%)

Query: 70  IYA-GMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLISN 128
           +YA G+  + Q+ LL       +  +R  ++++  SDI       +Q+  G YH+L +S 
Sbjct: 105 VYAWGLDSDGQLGLLGS-----EECIRVPRNIKSLSDI-----QIVQVACGYYHSLALSK 154

Query: 129 SS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTC 187
           +S VF  G +  G LG G +  +  S   I        +Q++A   H+  +  SG +F  
Sbjct: 155 ASEVFCWGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQIAAGGAHSFVLTLSGAIFGW 214

Query: 188 GDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQ 247
           G N     G  D N   + P L+++L+      +  G + T  LT  G V T G+  +GQ
Sbjct: 215 GRNKFGQLGLNDENDR-YVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQ 273

Query: 248 LGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVVYSFGSGSNFCLGHGE 305
           LGH  T     P+ +   E +GS+V QIA G  +  A V  +G +YSFG G N  LG G 
Sbjct: 274 LGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGS 331

Query: 306 QHDELQPRAIQ 316
             +   P  ++
Sbjct: 332 TSNRKSPFTVK 342


>gi|58533115|gb|AAW78912.1| putative chromosome condensation factor [Triticum turgidum]
          Length = 882

 Score =  125 bits (314), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 102/327 (31%), Positives = 156/327 (47%), Gaps = 24/327 (7%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V  V     HA+ V ++G+VFT G++S    GH  T      PRLVE+L       V  G
Sbjct: 79  VYHVDCGVRHASLVTRNGEVFTWGEDSGGRLGH-GTREDSVHPRLVESLAACNIDFVACG 137

Query: 225 LNFTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSYM 281
              T  +T  G ++T G  TH  G LGHG  +    P+ I+ PLE +  +  ++ G  + 
Sbjct: 138 EFHTCAVTTTGELYTWGDGTHNVGLLGHGTDVGHWIPRRISGPLEGL-QIAYVSCGTWHT 196

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD-- 339
             +T  G +++FG GS   LGHG+      PR +++    G+  + V+ G  H  A+   
Sbjct: 197 ALITSMGQLFTFGDGSFGVLGHGDLKSISCPREVESL--SGLKTIAVACGVWHTAAIVEV 254

Query: 340 ---------SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVL 390
                    S+G ++TWG G    LGHGD+  +  P  ++SL  +   +V      T  L
Sbjct: 255 IVTQSSATVSAGKLFTWGDGDKHRLGHGDKEARLKPTCVASLIDYDFYRVACGHSLTVGL 314

Query: 391 VDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRIL-DSLRAHHVSQISTGLYHTVVVTDRG 449
             +G V+  G   +G LG  +   SD   RP ++ D + + HV QI+ G YH  V+T R 
Sbjct: 315 TTSGKVWTMGNSVYGQLGNLN---SDG--RPCLVEDKIASEHVLQIACGSYHVAVLTSRS 369

Query: 450 RLFGFGDNERAQLGHDTLRGCLEPTEI 476
            +F +G     +LGH  +     PT +
Sbjct: 370 EVFTWGKGANGRLGHGDIEDRKVPTTV 396



 Score = 96.3 bits (238), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 81/274 (29%), Positives = 127/274 (46%), Gaps = 23/274 (8%)

Query: 116 ITTGRYHTLLISNSS---VFSCGSSLCGVLGHGPETTQCVSFTRINFP-SAAHVVQVSAS 171
           +  G +HT  ++ +     +  G+   G+LGHG +    +   RI+ P     +  VS  
Sbjct: 134 VACGEFHTCAVTTTGELYTWGDGTHNVGLLGHGTDVGHWIP-RRISGPLEGLQIAYVSCG 192

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
             H A +   GQ+FT GD S    GH D  + I  PR VE+L G+    V  G+  T  +
Sbjct: 193 TWHTALITSMGQLFTFGDGSFGVLGHGDL-KSISCPREVESLSGLKTIAVACGVWHTAAI 251

Query: 232 T-----------IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 280
                         G + T G     +LGHGD   R  P  +A L +     ++A G S 
Sbjct: 252 VEVIVTQSSATVSAGKLFTWGDGDKHRLGHGDKEARLKPTCVASLIDY-DFYRVACGHSL 310

Query: 281 MLAVTGNGVVYSFGSGSNFCLGH-GEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 339
            + +T +G V++ G   N   G  G  + + +P  ++  +    HV++++ G  HV  L 
Sbjct: 311 TVGLTTSGKVWTMG---NSVYGQLGNLNSDGRPCLVED-KIASEHVLQIACGSYHVAVLT 366

Query: 340 SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
           S   V+TWGKG  G LGHGD  D+ +P  + +L+
Sbjct: 367 SRSEVFTWGKGANGRLGHGDIEDRKVPTTVEALR 400



 Score = 91.3 bits (225), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 74/243 (30%), Positives = 117/243 (48%), Gaps = 25/243 (10%)

Query: 252 DTLDRPTPKS----IAPLEE--VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGE 305
           DT+ R T K+      PLE   V  V  +  G  +   VT NG V+++G  S   LGHG 
Sbjct: 54  DTVIRSTGKTDFLLPKPLESNLVLDVYHVDCGVRHASLVTRNGEVFTWGEDSGGRLGHGT 113

Query: 306 QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY--CGALGHGDEIDK 363
           + D + PR +++      ++  V+ G+ H  A+ ++G +YTWG G    G LGHG ++  
Sbjct: 114 REDSVHPRLVESL--AACNIDFVACGEFHTCAVTTTGELYTWGDGTHNVGLLGHGTDVGH 171

Query: 364 TLPEPLSSLKSHLAVQ-VCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPR 422
            +P  +S     L +  V      T ++   G ++ FG   FG LG  D      +  PR
Sbjct: 172 WIPRRISGPLEGLQIAYVSCGTWHTALITSMGQLFTFGDGSFGVLGHGDL---KSISCPR 228

Query: 423 ILDSLRAHHVSQISTGLYHT-----VVVTDR------GRLFGFGDNERAQLGHDTLRGCL 471
            ++SL       ++ G++HT     V+VT        G+LF +GD ++ +LGH      L
Sbjct: 229 EVESLSGLKTIAVACGVWHTAAIVEVIVTQSSATVSAGKLFTWGDGDKHRLGHGDKEARL 288

Query: 472 EPT 474
           +PT
Sbjct: 289 KPT 291



 Score = 84.7 bits (208), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 77/271 (28%), Positives = 127/271 (46%), Gaps = 18/271 (6%)

Query: 207 PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 266
           P+ +E+   +    V  G+     +T  G V T G ++ G+LGHG   D   P+ +  L 
Sbjct: 68  PKPLESNLVLDVYHVDCGVRHASLVTRNGEVFTWGEDSGGRLGHGTREDSVHPRLVESLA 127

Query: 267 EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC--LGHGEQHDELQPRAIQTFRRKGIH 324
              ++  +A G  +  AVT  G +Y++G G++    LGHG       PR I +   +G+ 
Sbjct: 128 AC-NIDFVACGEFHTCAVTTTGELYTWGDGTHNVGLLGHGTDVGHWIPRRI-SGPLEGLQ 185

Query: 325 VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP---EPLSSLKS------- 374
           +  VS G  H   + S G ++T+G G  G LGHGD    + P   E LS LK+       
Sbjct: 186 IAYVSCGTWHTALITSMGQLFTFGDGSFGVLGHGDLKSISCPREVESLSGLKTIAVACGV 245

Query: 375 -HLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVS 433
            H A  V     ++   V  G ++ +G      LG  D+   +  L+P  + SL  +   
Sbjct: 246 WHTAAIVEVIVTQSSATVSAGKLFTWGDGDKHRLGHGDK---EARLKPTCVASLIDYDFY 302

Query: 434 QISTGLYHTVVVTDRGRLFGFGDNERAQLGH 464
           +++ G   TV +T  G+++  G++   QLG+
Sbjct: 303 RVACGHSLTVGLTTSGKVWTMGNSVYGQLGN 333



 Score = 84.7 bits (208), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 90/348 (25%), Positives = 148/348 (42%), Gaps = 39/348 (11%)

Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHVVQVSASE 172
           R+ +L+  N  VF+ G    G LGHG       P   + ++   I+F        V+  E
Sbjct: 87  RHASLVTRNGEVFTWGEDSGGRLGHGTREDSVHPRLVESLAACNIDF--------VACGE 138

Query: 173 NHAAFVLQSGQVFTCGDNSSFC--CGH-RDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
            H   V  +G+++T GD +      GH  D    I R R+   L+G+    V+ G   T 
Sbjct: 139 FHTCAVTTTGELYTWGDGTHNVGLLGHGTDVGHWIPR-RISGPLEGLQIAYVSCGTWHTA 197

Query: 230 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV----- 284
            +T  G + T G  + G LGHGD      P+ +  L  + ++  +A G  +  A+     
Sbjct: 198 LITSMGQLFTFGDGSFGVLGHGDLKSISCPREVESLSGLKTIA-VACGVWHTAAIVEVIV 256

Query: 285 ------TGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
                    G ++++G G    LGHG++   L+P  + +      +  RV+ G    V L
Sbjct: 257 TQSSATVSAGKLFTWGDGDKHRLGHGDKEARLKPTCVASLIDYDFY--RVACGHSLTVGL 314

Query: 339 DSSGYVYTWGKGYCGALGHGDEIDKT-LPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVY 397
            +SG V+T G    G LG+ +   +  L E    + S   +Q+        VL     V+
Sbjct: 315 TTSGKVWTMGNSVYGQLGNLNSDGRPCLVE--DKIASEHVLQIACGSYHVAVLTSRSEVF 372

Query: 398 GFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVV 445
            +G    G LG  D  + D+ + P  +++LR   V  I+ G   T  +
Sbjct: 373 TWGKGANGRLGHGD--IEDRKV-PTTVEALRDRAVRHIACGANFTAAI 417



 Score = 75.9 bits (185), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 63/221 (28%), Positives = 105/221 (47%), Gaps = 18/221 (8%)

Query: 116 ITTGRYHTLLISN-SSVFSCGSSLCGVLGHG-------PETTQCVSFTRI-----NFPSA 162
           ++ G +HT LI++   +F+ G    GVLGHG       P   + +S  +           
Sbjct: 189 VSCGTWHTALITSMGQLFTFGDGSFGVLGHGDLKSISCPREVESLSGLKTIAVACGVWHT 248

Query: 163 AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 222
           A +V+V  +++ A   + +G++FT GD      GH D      +P  V +L      +V 
Sbjct: 249 AAIVEVIVTQSSA--TVSAGKLFTWGDGDKHRLGHGD-KEARLKPTCVASLIDYDFYRVA 305

Query: 223 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 282
            G + T  LT  G V T G++ +GQLG+ ++  RP         E   V+QIA G  ++ 
Sbjct: 306 CGHSLTVGLTTSGKVWTMGNSVYGQLGNLNSDGRPCLVEDKIASE--HVLQIACGSYHVA 363

Query: 283 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGI 323
            +T    V+++G G+N  LGHG+  D   P  ++  R + +
Sbjct: 364 VLTSRSEVFTWGKGANGRLGHGDIEDRKVPTTVEALRDRAV 404



 Score = 64.7 bits (156), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 48/155 (30%), Positives = 70/155 (45%), Gaps = 2/155 (1%)

Query: 323 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCA 382
           + V  V  G  H   +  +G V+TWG+   G LGHG   D   P  + SL +     V  
Sbjct: 77  LDVYHVDCGVRHASLVTRNGEVFTWGEDSGGRLGHGTREDSVHPRLVESLAACNIDFVAC 136

Query: 383 RKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPR-ILDSLRAHHVSQISTGLYH 441
            +  T  +  TG +Y +G  G  ++G    G       PR I   L    ++ +S G +H
Sbjct: 137 GEFHTCAVTTTGELYTWG-DGTHNVGLLGHGTDVGHWIPRRISGPLEGLQIAYVSCGTWH 195

Query: 442 TVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 476
           T ++T  G+LF FGD     LGH  L+    P E+
Sbjct: 196 TALITSMGQLFTFGDGSFGVLGHGDLKSISCPREV 230



 Score = 52.4 bits (124), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 46/149 (30%), Positives = 66/149 (44%), Gaps = 14/149 (9%)

Query: 339 DSSGYVYTWGKGYC--GALGHGDEI-------DKTLPEPLSSLKSHLAVQVCARKRKTFV 389
           DS G VY WG+  C   A    D +       D  LP+PL S        V    R   +
Sbjct: 32  DSLGDVYVWGEVVCDNSARTSSDTVIRSTGKTDFLLPKPLESNLVLDVYHVDCGVRHASL 91

Query: 390 LVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRG 449
           +   G V+ +G    G LG    G  +  + PR+++SL A ++  ++ G +HT  VT  G
Sbjct: 92  VTRNGEVFTWGEDSGGRLGH---GTREDSVHPRLVESLAACNIDFVACGEFHTCAVTTTG 148

Query: 450 RLFGFGD--NERAQLGHDTLRGCLEPTEI 476
            L+ +GD  +    LGH T  G   P  I
Sbjct: 149 ELYTWGDGTHNVGLLGHGTDVGHWIPRRI 177


>gi|321474724|gb|EFX85688.1| hypothetical protein DAPPUDRAFT_98215 [Daphnia pulex]
          Length = 1052

 Score =  125 bits (314), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 104/308 (33%), Positives = 143/308 (46%), Gaps = 12/308 (3%)

Query: 159 FPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPC 218
           F     +VQV   ENH   V++ G++F+ G N     GH    R   R   V+ L+    
Sbjct: 30  FTLVDDIVQVGCGENHTILVMKDGKLFSFGLNDYGQLGH---CRSRTRAEPVDGLEAHNI 86

Query: 219 KQVTAGLNFTGFLTIRGHVHTCGSNTHGQLG-HGDTLDRPTPKSIAPLEEVGSVVQIAAG 277
            QV  G   T      G V   GSN++GQLG + +    PTPK +  L     VVQIA G
Sbjct: 87  TQVACGAQHTLAQNEWGEVFAWGSNSNGQLGLNVEESMMPTPKMVKSL-ATKQVVQIACG 145

Query: 278 PSYMLAVTGNGVVYSFGSGSNFCLGHGEQ-HDELQPRAIQTFRRKGIHVVRVSAGDEHVV 336
            S+ +A+T  G +Y +GS S+  LG G     E +P  ++    +GI +  +S G +   
Sbjct: 146 RSHSMALTNVGEIYCWGSNSHGQLGLGSSGTPETKPCLVKLL--QGIPISHISCGADFSF 203

Query: 337 ALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSV 396
           A+  SG VY WGK   G LG GD  D+  P  L SL+      +      T  L   G V
Sbjct: 204 AVTPSGAVYGWGKNSFGQLGLGDTTDRPQPTQLKSLRFQRVTYIRCGMDHTAALTRDGGV 263

Query: 397 YGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV-VTDRGRLFGFG 455
           + FG   +G LG      S   + PR +  L    V+QI  G  HT+  V  +GR++ FG
Sbjct: 264 FTFGAGMYGQLG---HCTSANEMLPRKVLELMGTTVTQICCGRCHTLAFVPSKGRIYAFG 320

Query: 456 DNERAQLG 463
                QLG
Sbjct: 321 LGGSGQLG 328



 Score =  122 bits (307), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 92/300 (30%), Positives = 143/300 (47%), Gaps = 13/300 (4%)

Query: 114 MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTR---INFPSAAHVVQVS 169
           +Q+  G  HT+L+  +  +FS G +  G LGH      C S TR   ++   A ++ QV+
Sbjct: 37  VQVGCGENHTILVMKDGKLFSFGLNDYGQLGH------CRSRTRAEPVDGLEAHNITQVA 90

Query: 170 ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
               H     + G+VF  G NS+   G       +  P++V++L      Q+  G + + 
Sbjct: 91  CGAQHTLAQNEWGEVFAWGSNSNGQLGLNVEESMMPTPKMVKSLATKQVVQIACGRSHSM 150

Query: 230 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 289
            LT  G ++  GSN+HGQLG G +    T   +  L +   +  I+ G  +  AVT +G 
Sbjct: 151 ALTNVGEIYCWGSNSHGQLGLGSSGTPETKPCLVKLLQGIPISHISCGADFSFAVTPSGA 210

Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 349
           VY +G  S   LG G+  D  QP  +++ R + +  +R   G +H  AL   G V+T+G 
Sbjct: 211 VYGWGKNSFGQLGLGDTTDRPQPTQLKSLRFQRVTYIR--CGMDHTAALTRDGGVFTFGA 268

Query: 350 GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDT-GSVYGFGWMGFGSLG 408
           G  G LGH    ++ LP  +  L      Q+C  +  T   V + G +Y FG  G G LG
Sbjct: 269 GMYGQLGHCTSANEMLPRKVLELMGTTVTQICCGRCHTLAFVPSKGRIYAFGLGGSGQLG 328



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 81/260 (31%), Positives = 124/260 (47%), Gaps = 10/260 (3%)

Query: 220 QVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPS 279
           QV  G N T  +   G + + G N +GQLGH  +  R  P       E  ++ Q+A G  
Sbjct: 38  QVGCGENHTILVMKDGKLFSFGLNDYGQLGHCRSRTRAEPVDGL---EAHNITQVACGAQ 94

Query: 280 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDEL-QPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
           + LA    G V+++GS SN  LG   +   +  P+ +++   K   VV+++ G  H +AL
Sbjct: 95  HTLAQNEWGEVFAWGSNSNGQLGLNVEESMMPTPKMVKSLATK--QVVQIACGRSHSMAL 152

Query: 339 DSSGYVYTWGKGYCGALGHGDE-IDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVY 397
            + G +Y WG    G LG G     +T P  +  L+      +      +F +  +G+VY
Sbjct: 153 TNVGEIYCWGSNSHGQLGLGSSGTPETKPCLVKLLQGIPISHISCGADFSFAVTPSGAVY 212

Query: 398 GFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDN 457
           G+G   FG LG  D   +D+  +P  L SLR   V+ I  G+ HT  +T  G +F FG  
Sbjct: 213 GWGKNSFGQLGLGD--TTDRP-QPTQLKSLRFQRVTYIRCGMDHTAALTRDGGVFTFGAG 269

Query: 458 ERAQLGHDTLRGCLEPTEIF 477
              QLGH T    + P ++ 
Sbjct: 270 MYGQLGHCTSANEMLPRKVL 289



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 58/221 (26%), Positives = 103/221 (46%), Gaps = 10/221 (4%)

Query: 258 TPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQT 317
           +P++ +P   V  +VQ+  G ++ + V  +G ++SFG      LGH       +P     
Sbjct: 24  SPRA-SPFTLVDDIVQVGCGENHTILVMKDGKLFSFGLNDYGQLGHCRSRTRAEP----V 78

Query: 318 FRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEP--LSSLKSH 375
              +  ++ +V+ G +H +A +  G V+ WG    G LG   E +  +P P  + SL + 
Sbjct: 79  DGLEAHNITQVACGAQHTLAQNEWGEVFAWGSNSNGQLGLNVE-ESMMPTPKMVKSLATK 137

Query: 376 LAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQI 435
             VQ+   +  +  L + G +Y +G    G LG    G  +   +P ++  L+   +S I
Sbjct: 138 QVVQIACGRSHSMALTNVGEIYCWGSNSHGQLGLGSSGTPET--KPCLVKLLQGIPISHI 195

Query: 436 STGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 476
           S G   +  VT  G ++G+G N   QLG        +PT++
Sbjct: 196 SCGADFSFAVTPSGAVYGWGKNSFGQLGLGDTTDRPQPTQL 236



 Score = 47.8 bits (112), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 28/104 (26%), Positives = 51/104 (49%), Gaps = 6/104 (5%)

Query: 378 VQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIST 437
           VQV   +  T +++  G ++ FG   +G LG           R   +D L AH+++Q++ 
Sbjct: 37  VQVGCGENHTILVMKDGKLFSFGLNDYGQLGH-----CRSRTRAEPVDGLEAHNITQVAC 91

Query: 438 GLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQEM 481
           G  HT+   + G +F +G N   QLG + +   + PT   ++ +
Sbjct: 92  GAQHTLAQNEWGEVFAWGSNSNGQLGLN-VEESMMPTPKMVKSL 134



 Score = 38.5 bits (88), Expect = 7.8,   Method: Compositional matrix adjust.
 Identities = 20/58 (34%), Positives = 28/58 (48%)

Query: 418 VLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTE 475
           +  PR         + Q+  G  HT++V   G+LF FG N+  QLGH   R   EP +
Sbjct: 22  ITSPRASPFTLVDDIVQVGCGENHTILVMKDGKLFSFGLNDYGQLGHCRSRTRAEPVD 79


>gi|260786461|ref|XP_002588276.1| hypothetical protein BRAFLDRAFT_124709 [Branchiostoma floridae]
 gi|229273436|gb|EEN44287.1| hypothetical protein BRAFLDRAFT_124709 [Branchiostoma floridae]
          Length = 1914

 Score =  125 bits (314), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 86/280 (30%), Positives = 131/280 (46%), Gaps = 16/280 (5%)

Query: 210 VEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG 269
           +E    +  +QV  GL     + +   V+T G  + GQLGHGD L R  P+ +  L+   
Sbjct: 635 IELPAKIKIRQVAVGLEHMVVVAMERAVYTWGEGSKGQLGHGDLLGRSKPEMVEALKG-K 693

Query: 270 SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS 329
           S+V+   G  + + V+ NG+V + G GSN CLGHG+     +PR I+      + V  +S
Sbjct: 694 SIVRACCGDGFSVFVSDNGIVMTCGDGSNGCLGHGDWMSASRPRLIEPLL--SVDVRAIS 751

Query: 330 AGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFV 389
            G  HVVA+ S G V+ WG+G  G LG GDE D   P+ +   +     +V      T  
Sbjct: 752 CGPHHVVAVGSDGEVFAWGRGKHGCLGLGDEEDHFSPQEVQISEPVFIREVKCGVDGTMF 811

Query: 390 LVDTGSVYGFGWMGFGSLGFPDRGVSDKVLR-------------PRILDSLRAHHVSQIS 436
           L D GSV   G      LG   R    + ++             P ++ +L  H    ++
Sbjct: 812 LTDMGSVLACGNNENNKLGLNHRQGFLRAMKNLLQKVEVPGRKVPTVVRALTNHRAIDMA 871

Query: 437 TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 476
            G +HT V+ + G+++ FG N   QLG    +    P E+
Sbjct: 872 VGPHHTSVLVEPGKVYTFGRNLEGQLGTGHTKPRDAPMEV 911



 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 94/331 (28%), Positives = 149/331 (45%), Gaps = 24/331 (7%)

Query: 149 TQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDT-NRPIFRP 207
           T  ++ T I  P+   + QV+    H   V     V+T G+ S    GH D   R   +P
Sbjct: 627 TCAMTLTPIELPAKIKIRQVAVGLEHMVVVAMERAVYTWGEGSKGQLGHGDLLGR--SKP 684

Query: 208 RLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEE 267
            +VEALKG    +   G  F+ F++  G V TCG  ++G LGHGD +    P+ I PL  
Sbjct: 685 EMVEALKGKSIVRACCGDGFSVFVSDNGIVMTCGDGSNGCLGHGDWMSASRPRLIEPLLS 744

Query: 268 VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVR 327
           V  V  I+ GP +++AV  +G V+++G G + CLG G++ D   P+ +Q    + + +  
Sbjct: 745 V-DVRAISCGPHHVVAVGSDGEVFAWGRGKHGCLGLGDEEDHFSPQEVQI--SEPVFIRE 801

Query: 328 VSAGDEHVVALDSSGYVYTWGKGYCGALG---------------HGDEID-KTLPEPLSS 371
           V  G +  + L   G V   G      LG                  E+  + +P  + +
Sbjct: 802 VKCGVDGTMFLTDMGSVLACGNNENNKLGLNHRQGFLRAMKNLLQKVEVPGRKVPTVVRA 861

Query: 372 LKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHH 431
           L +H A+ +      T VLV+ G VY FG    G LG       D  +  + L S+    
Sbjct: 862 LTNHRAIDMAVGPHHTSVLVEPGKVYTFGRNLEGQLGTGHTKPRDAPMEVKDL-SISDKT 920

Query: 432 VSQISTG-LYHTVVVTDRGRLFGFGDNERAQ 461
           V+ ++ G ++  V +     LF +G   R +
Sbjct: 921 VTMLACGDMFTAVGINSENALFFWGTRYRPK 951



 Score = 81.6 bits (200), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 58/212 (27%), Positives = 96/212 (45%), Gaps = 5/212 (2%)

Query: 271 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 330
           + Q+A G  +M+ V     VY++G GS   LGHG+     +P  ++    KG  +VR   
Sbjct: 643 IRQVAVGLEHMVVVAMERAVYTWGEGSKGQLGHGDLLGRSKPEMVEAL--KGKSIVRACC 700

Query: 331 GDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVL 390
           GD   V +  +G V T G G  G LGHGD +  + P  +  L S     +         +
Sbjct: 701 GDGFSVFVSDNGIVMTCGDGSNGCLGHGDWMSASRPRLIEPLLSVDVRAISCGPHHVVAV 760

Query: 391 VDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGR 450
              G V+ +G    G LG  D    +    P+ +       + ++  G+  T+ +TD G 
Sbjct: 761 GSDGEVFAWGRGKHGCLGLGDE---EDHFSPQEVQISEPVFIREVKCGVDGTMFLTDMGS 817

Query: 451 LFGFGDNERAQLGHDTLRGCLEPTEIFIQEME 482
           +   G+NE  +LG +  +G L   +  +Q++E
Sbjct: 818 VLACGNNENNKLGLNHRQGFLRAMKNLLQKVE 849



 Score = 77.8 bits (190), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 52/158 (32%), Positives = 76/158 (48%), Gaps = 3/158 (1%)

Query: 323 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCA 382
           I + +V+ G EH+V +     VYTWG+G  G LGHGD + ++ PE + +LK    V+ C 
Sbjct: 641 IKIRQVAVGLEHMVVVAMERAVYTWGEGSKGQLGHGDLLGRSKPEMVEALKGKSIVRACC 700

Query: 383 RKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHT 442
               +  + D G V   G    G LG  D   +    RPR+++ L +  V  IS G +H 
Sbjct: 701 GDGFSVFVSDNGIVMTCGDGSNGCLGHGDWMSAS---RPRLIEPLLSVDVRAISCGPHHV 757

Query: 443 VVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQE 480
           V V   G +F +G  +   LG         P E+ I E
Sbjct: 758 VAVGSDGEVFAWGRGKHGCLGLGDEEDHFSPQEVQISE 795



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 67/248 (27%), Positives = 101/248 (40%), Gaps = 20/248 (8%)

Query: 121 YHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFP-SAAHVVQVSASENHAAFVL 179
           +   +  N  V +CG    G LGHG   +   S  R+  P  +  V  +S   +H   V 
Sbjct: 704 FSVFVSDNGIVMTCGDGSNGCLGHGDWMS--ASRPRLIEPLLSVDVRAISCGPHHVVAVG 761

Query: 180 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 239
             G+VF  G     C G  D     F P+ V+  + V  ++V  G++ T FLT  G V  
Sbjct: 762 SDGEVFAWGRGKHGCLGLGD-EEDHFSPQEVQISEPVFIREVKCGVDGTMFLTDMGSVLA 820

Query: 240 CGSNTHGQLG--HGDTLDRPTP----KSIAPLEEVGSVVQ---------IAAGPSYMLAV 284
           CG+N + +LG  H     R       K   P  +V +VV+         +A GP +   +
Sbjct: 821 CGNNENNKLGLNHRQGFLRAMKNLLQKVEVPGRKVPTVVRALTNHRAIDMAVGPHHTSVL 880

Query: 285 TGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEH-VVALDSSGY 343
              G VY+FG      LG G       P  ++        V  ++ GD    V ++S   
Sbjct: 881 VEPGKVYTFGRNLEGQLGTGHTKPRDAPMEVKDLSISDKTVTMLACGDMFTAVGINSENA 940

Query: 344 VYTWGKGY 351
           ++ WG  Y
Sbjct: 941 LFFWGTRY 948


>gi|440895825|gb|ELR47919.1| Putative E3 ubiquitin-protein ligase HERC4 [Bos grunniens mutus]
          Length = 1056

 Score =  125 bits (314), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 88/276 (31%), Positives = 140/276 (50%), Gaps = 10/276 (3%)

Query: 204 IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 263
           +  PR  +       + V  GL  T F+   G V+TCG N  GQLGH  +  R  P+ + 
Sbjct: 22  VLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKS--RKKPEQVV 79

Query: 264 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH-GEQHDELQPRAIQTFRRKG 322
            L+   ++V ++ G ++ LA+   G VY++G  S+  LG  G +     PR I++     
Sbjct: 80  ALD-AQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSL--SD 136

Query: 323 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTL-PEPLSSLKSHLAVQVC 381
           I +V+V+ G  H +AL  +  V+ WG+   G LG G +  K   P+ + SL     +Q+ 
Sbjct: 137 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQIA 196

Query: 382 ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYH 441
           A    +FVL  +G+++G+G   FG LG  D   +D+ + P +L SLR   +  I  G  H
Sbjct: 197 AGGAHSFVLTLSGAIFGWGRNKFGQLGLNDE--NDRYV-PNLLKSLRTQKIVYICCGEDH 253

Query: 442 TVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF 477
           T  +T  G +F FG     QLGH++    + P ++F
Sbjct: 254 TAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVF 289



 Score =  122 bits (306), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 103/333 (30%), Positives = 154/333 (46%), Gaps = 13/333 (3%)

Query: 135 GSSLCGVLGHGPETTQCVSFTRI-NFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSF 193
           G++  G LG G    + V   R  +F     V  V     H  FVL  G V+TCG N   
Sbjct: 5   GNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLG 64

Query: 194 CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGH-GD 252
             GH  + +   +P  V AL       V+ G   T  L  +G V+  G ++ GQLG  G 
Sbjct: 65  QLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGS 121

Query: 253 TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHG-EQHDELQ 311
                 P++I  L ++  +VQ+A G  + LA++    V+ +G      LG G +   +  
Sbjct: 122 EECIRVPRNIKSLSDI-QIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQAS 180

Query: 312 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSS 371
           P+ I++    GI  ++++AG  H   L  SG ++ WG+   G LG  DE D+ +P  L S
Sbjct: 181 PQLIKSLL--GIPFMQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKS 238

Query: 372 LKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHH 431
           L++   V +C  +  T  L   G V+ FG  G+G LG      +   + PR +  L    
Sbjct: 239 LRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG---HNSTSHEINPRKVFELMGSI 295

Query: 432 VSQISTGLYHT-VVVTDRGRLFGFGDNERAQLG 463
           V+QI+ G  HT   V   GR++ FG     QLG
Sbjct: 296 VTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 81/291 (27%), Positives = 138/291 (47%), Gaps = 8/291 (2%)

Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 179
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V VS  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVSCGEAHTLALN 100

Query: 180 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 239
             GQV+  G +S    G   +   I  PR +++L  +   QV  G   +  L+    V  
Sbjct: 101 DKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFC 160

Query: 240 CGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
            G N +GQLG G D   + +P+ I  L  +   +QIAAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKYGQLGLGIDCKKQASPQLIKSLLGI-PFMQIAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 299 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 358
             LG  +++D   P  +++ R + I  V +  G++H  AL   G V+T+G G  G LGH 
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRTQKI--VYICCGEDHTAALTKEGGVFTFGAGGYGQLGHN 277

Query: 359 DEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLG 408
               +  P  +  L   +  Q+ C R+  +  +  +G +Y FG  G G LG
Sbjct: 278 STSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 83/274 (30%), Positives = 132/274 (48%), Gaps = 10/274 (3%)

Query: 98  QSVEHSSDIVETSAGNM-QITTGRYHTLLISNS-SVFSCGSSLCGVLGH-GPETTQCVSF 154
           +S +    +V   A N+  ++ G  HTL +++   V++ G    G LG  G E  +C+  
Sbjct: 70  KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSE--ECIRV 127

Query: 155 TR-INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEAL 213
            R I   S   +VQV+    H+  + ++ +VF  G N     G     +    P+L+++L
Sbjct: 128 PRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQASPQLIKSL 187

Query: 214 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
            G+P  Q+ AG   +  LT+ G +   G N  GQLG  D  DR  P  +  L     +V 
Sbjct: 188 LGIPFMQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLR-TQKIVY 246

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           I  G  +  A+T  G V++FG+G    LGH     E+ PR +  F   G  V +++ G +
Sbjct: 247 ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQ 304

Query: 334 HVVA-LDSSGYVYTWGKGYCGALGHGDEIDKTLP 366
           H  A + SSG +Y++G G  G LG G   ++  P
Sbjct: 305 HTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338



 Score = 79.7 bits (195), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 76/251 (30%), Positives = 119/251 (47%), Gaps = 17/251 (6%)

Query: 70  IYA-GMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLISN 128
           +YA G+  + Q+ LL       +  +R  ++++  SDI       +Q+  G YH+L +S 
Sbjct: 105 VYAWGLDSDGQLGLLGS-----EECIRVPRNIKSLSDI-----QIVQVACGYYHSLALSK 154

Query: 129 SS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTC 187
           +S VF  G +  G LG G +  +  S   I        +Q++A   H+  +  SG +F  
Sbjct: 155 ASEVFCWGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQIAAGGAHSFVLTLSGAIFGW 214

Query: 188 GDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQ 247
           G N     G  D N   + P L+++L+      +  G + T  LT  G V T G+  +GQ
Sbjct: 215 GRNKFGQLGLNDENDR-YVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQ 273

Query: 248 LGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVVYSFGSGSNFCLGHGE 305
           LGH  T     P+ +   E +GS+V QIA G  +  A V  +G +YSFG G N  LG G 
Sbjct: 274 LGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGS 331

Query: 306 QHDELQPRAIQ 316
             +   P  ++
Sbjct: 332 TSNRKSPFTVK 342


>gi|224011731|ref|XP_002295640.1| predicted protein [Thalassiosira pseudonana CCMP1335]
 gi|209583671|gb|ACI64357.1| predicted protein [Thalassiosira pseudonana CCMP1335]
          Length = 277

 Score =  125 bits (313), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 79/241 (32%), Positives = 116/241 (48%), Gaps = 6/241 (2%)

Query: 237 VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 296
           V + G    GQLG GDT D+  P  +  L  VG +  +  G  +  AV  NG +Y++G G
Sbjct: 1   VFSWGRGEDGQLGIGDTSDQDEPTYVDALRGVGIITHVTCGSYHTAAVASNGDLYTWGGG 60

Query: 297 SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 356
               LGHG +     PR ++     G+ +V ++ G  H   + S G +YTWG    G  G
Sbjct: 61  MYGKLGHGNESGHSTPRRVEAL--VGLSIVDIACGSRHTAVVTSKGCLYTWGDKENGVAG 118

Query: 357 HGD-EIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVS 415
           HGD E  +  P+ L  L     VQ+ A    T  L D    + +G   FG LG    G  
Sbjct: 119 HGDTEGHQYTPKLLERLNGKKVVQLSACGFHTACLTDDHETFAWGEGKFGRLG---NGTE 175

Query: 416 DKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTE 475
                PR+++SL   +  Q++ G +H+ V+T  G+++ FG  E  QLGH      L+PT 
Sbjct: 176 RNCHSPRLIESLIGKYPCQVACGGFHSAVITRDGKMYTFGGGEHGQLGHADKVNKLKPTL 235

Query: 476 I 476
           +
Sbjct: 236 V 236



 Score =  105 bits (261), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 77/247 (31%), Positives = 118/247 (47%), Gaps = 8/247 (3%)

Query: 206 RPRLVEALKGVPC-KQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP 264
            P  V+AL+GV     VT G   T  +   G ++T G   +G+LGHG+     TP+ +  
Sbjct: 22  EPTYVDALRGVGIITHVTCGSYHTAAVASNGDLYTWGGGMYGKLGHGNESGHSTPRRVEA 81

Query: 265 LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGE-QHDELQPRAIQTFRRKGI 323
           L  + S+V IA G  +   VT  G +Y++G   N   GHG+ +  +  P+ ++  R  G 
Sbjct: 82  LVGL-SIVDIACGSRHTAVVTSKGCLYTWGDKENGVAGHGDTEGHQYTPKLLE--RLNGK 138

Query: 324 HVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCAR 383
            VV++SA   H   L      + WG+G  G LG+G E +   P  + SL      QV   
Sbjct: 139 KVVQLSACGFHTACLTDDHETFAWGEGKFGRLGNGTERNCHSPRLIESLIGKYPCQVACG 198

Query: 384 KRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV 443
              + V+   G +Y FG    G LG  D+      L+P ++++L    V QI+ G  H+V
Sbjct: 199 GFHSAVITRDGKMYTFGGGEHGQLGHADK---VNKLKPTLVEALDGVVVKQITCGWSHSV 255

Query: 444 VVTDRGR 450
            +T  G 
Sbjct: 256 ALTSEGE 262



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 69/230 (30%), Positives = 112/230 (48%), Gaps = 7/230 (3%)

Query: 115 QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
            +T G YHT  + SN  +++ G  + G LGHG E+       R+       +V ++    
Sbjct: 37  HVTCGSYHTAAVASNGDLYTWGGGMYGKLGHGNESGHSTP-RRVEALVGLSIVDIACGSR 95

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
           H A V   G ++T GD  +   GH DT    + P+L+E L G    Q++A    T  LT 
Sbjct: 96  HTAVVTSKGCLYTWGDKENGVAGHGDTEGHQYTPKLLERLNGKKVVQLSACGFHTACLTD 155

Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSV-VQIAAGPSYMLAVTGNGVVYS 292
                  G    G+LG+G   +  +P+ I  L  +G    Q+A G  +   +T +G +Y+
Sbjct: 156 DHETFAWGEGKFGRLGNGTERNCHSPRLIESL--IGKYPCQVACGGFHSAVITRDGKMYT 213

Query: 293 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
           FG G +  LGH ++ ++L+P  ++     G+ V +++ G  H VAL S G
Sbjct: 214 FGGGEHGQLGHADKVNKLKPTLVEAL--DGVVVKQITCGWSHSVALTSEG 261



 Score = 83.2 bits (204), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 74/268 (27%), Positives = 119/268 (44%), Gaps = 5/268 (1%)

Query: 131 VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDN 190
           VFS G    G LG G  + Q              +  V+    H A V  +G ++T G  
Sbjct: 1   VFSWGRGEDGQLGIGDTSDQDEPTYVDALRGVGIITHVTCGSYHTAAVASNGDLYTWGGG 60

Query: 191 SSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGH 250
                GH + +     PR VEAL G+    +  G   T  +T +G ++T G   +G  GH
Sbjct: 61  MYGKLGHGNESGH-STPRRVEALVGLSIVDIACGSRHTAVVTSKGCLYTWGDKENGVAGH 119

Query: 251 GDTLD-RPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDE 309
           GDT   + TPK +  L     VVQ++A   +   +T +   +++G G    LG+G + + 
Sbjct: 120 GDTEGHQYTPKLLERLNGK-KVVQLSACGFHTACLTDDHETFAWGEGKFGRLGNGTERNC 178

Query: 310 LQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPL 369
             PR I++   K  +  +V+ G  H   +   G +YT+G G  G LGH D+++K  P  +
Sbjct: 179 HSPRLIESLIGK--YPCQVACGGFHSAVITRDGKMYTFGGGEHGQLGHADKVNKLKPTLV 236

Query: 370 SSLKSHLAVQVCARKRKTFVLVDTGSVY 397
            +L   +  Q+      +  L   G  +
Sbjct: 237 EALDGVVVKQITCGWSHSVALTSEGEYH 264


>gi|196004949|ref|XP_002112341.1| hypothetical protein TRIADDRAFT_56257 [Trichoplax adhaerens]
 gi|190584382|gb|EDV24451.1| hypothetical protein TRIADDRAFT_56257 [Trichoplax adhaerens]
          Length = 794

 Score =  125 bits (313), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 105/359 (29%), Positives = 169/359 (47%), Gaps = 20/359 (5%)

Query: 116 ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           I  G  HT++++ N  +F+ G++  G LG G   T+    T +       +  V+A   H
Sbjct: 40  IACGDEHTVVVTENGRLFTFGNNEWGQLGIGSNKTRNKPTT-VKALKPEKITHVAAGRFH 98

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 234
              V  S ++++ G  S    GH D    +  P  +E+L+      +  G   +  +T  
Sbjct: 99  TLAVTDSNKLYSFGQGSEGALGHGDET-DLNMPTSIESLEDKDVNIIACGGYHSAAITKN 157

Query: 235 GHVHTCGSNTHGQLG-HGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
           G ++  GSN+ GQLG   DT+  PT      L+   SV+ +A G  +   VT +G +Y+F
Sbjct: 158 GELYIWGSNSEGQLGLKNDTISYPTM-----LDLGKSVISVACGYYHTAVVTADGKLYTF 212

Query: 294 GS--GSNFCLGHGEQHDELQPRAIQTFRRKGI--HVVRVSAGDEHVVALDSSGYVYTWGK 349
           G   G    LG  E H   +P+ +     KGI   VV+V+ G  H VAL +SG VYT+G 
Sbjct: 213 GETEGGKLGLGDIEAHKVTKPKVV-----KGISGKVVKVACGGNHTVALTASGQVYTFGS 267

Query: 350 GYCGALGHGDEI-DKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLG 408
           G  G LG G +I D  +P+ + +L       +   +  T V+ D G ++ FG    G LG
Sbjct: 268 GQNGQLGLGSKIMDSNIPKLVEALSKRKIKHIACGESHTAVVSDKGELFTFGDGRHGKLG 327

Query: 409 FPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTL 467
             D   S+ + +P  +  L+   V  I+ G  HT+V  ++      GD++     +D +
Sbjct: 328 QGDESFSN-LFKPVKVQRLKEFIVLHIACGGCHTIVACNKIDKLANGDDDNESSSNDEV 385



 Score =  121 bits (304), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 105/351 (29%), Positives = 166/351 (47%), Gaps = 25/351 (7%)

Query: 146 PETTQCVSFTRINFPS---------AAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCG 196
           PET    +F +  F           +  V  ++  + H   V ++G++FT G+N     G
Sbjct: 9   PETGAVFTFGKSRFGDNRTNKFWIRSDKVTDIACGDEHTVVVTENGRLFTFGNNEWGQLG 68

Query: 197 HRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDR 256
              +N+   +P  V+ALK      V AG   T  +T    +++ G  + G LGHGD  D 
Sbjct: 69  I-GSNKTRNKPTTVKALKPEKITHVAAGRFHTLAVTDSNKLYSFGQGSEGALGHGDETDL 127

Query: 257 PTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQ 316
             P SI  LE+   V  IA G  +  A+T NG +Y +GS S   LG   ++D +   +  
Sbjct: 128 NMPTSIESLED-KDVNIIACGGYHSAAITKNGELYIWGSNSEGQLGL--KNDTI---SYP 181

Query: 317 TFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGD-EIDK-TLPEPLSSLKS 374
           T    G  V+ V+ G  H   + + G +YT+G+   G LG GD E  K T P+ +  + S
Sbjct: 182 TMLDLGKSVISVACGYYHTAVVTADGKLYTFGETEGGKLGLGDIEAHKVTKPKVVKGI-S 240

Query: 375 HLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQ 434
              V+V      T  L  +G VY FG    G LG   + +   +  P+++++L    +  
Sbjct: 241 GKVVKVACGGNHTVALTASGQVYTFGSGQNGQLGLGSKIMDSNI--PKLVEALSKRKIKH 298

Query: 435 ISTGLYHTVVVTDRGRLFGFGDNERAQLGH--DTLRGCLEPTEIFIQEMEE 483
           I+ G  HT VV+D+G LF FGD    +LG   ++     +P  + +Q ++E
Sbjct: 299 IACGESHTAVVSDKGELFTFGDGRHGKLGQGDESFSNLFKP--VKVQRLKE 347



 Score = 49.3 bits (116), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 34/99 (34%), Positives = 53/99 (53%), Gaps = 13/99 (13%)

Query: 390 LVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRG 449
           + +TG+V+ FG   FG         ++K         +R+  V+ I+ G  HTVVVT+ G
Sbjct: 8   IPETGAVFTFGKSRFGD------NRTNKFW-------IRSDKVTDIACGDEHTVVVTENG 54

Query: 450 RLFGFGDNERAQLGHDTLRGCLEPTEIFIQEMEEDTGLA 488
           RLF FG+NE  QLG  + +   +PT +   + E+ T +A
Sbjct: 55  RLFTFGNNEWGQLGIGSNKTRNKPTTVKALKPEKITHVA 93


>gi|260832820|ref|XP_002611355.1| hypothetical protein BRAFLDRAFT_120334 [Branchiostoma floridae]
 gi|229296726|gb|EEN67365.1| hypothetical protein BRAFLDRAFT_120334 [Branchiostoma floridae]
          Length = 1187

 Score =  125 bits (313), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 84/271 (30%), Positives = 137/271 (50%), Gaps = 10/271 (3%)

Query: 207 PRLVEALKGVPCKQV--TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP 264
           P L+E+++ V  K+V   +G      L+  G V + G    G+LGHG+      P+ I  
Sbjct: 378 PTLLESIQHVHIKKVAVNSGGKHCLALSSEGEVFSWGEAEDGKLGHGNRNSCDRPRVIES 437

Query: 265 LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH 324
           L     VV IAAG ++   +T  G ++++G G    LGHG+  D+++P+ ++    KG+ 
Sbjct: 438 LRG-KEVVDIAAGGAHSACITSTGELFTWGKGRYGRLGHGDSEDQMKPKLVEAL--KGVR 494

Query: 325 VVRVS--AGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCA 382
           V+ V+  +GD   + +     V++WG G  G LG G      +P+ + +L     V+V  
Sbjct: 495 VIDVACGSGDAQTLCITDDDSVWSWGDGDYGKLGRGGSDGCKIPQKVEALIGQGVVKVEC 554

Query: 383 RKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHT 442
             + +  L  +G VY +G   +  LG    G  D V RPR + +L+  +V  I+TG  H 
Sbjct: 555 GSQFSVALTKSGCVYTWGKGDYHRLG---HGSDDHVRRPRKVAALQGKNVISIATGSLHC 611

Query: 443 VVVTDRGRLFGFGDNERAQLGHDTLRGCLEP 473
           V  TD+G +F +GDN+  QLG  +      P
Sbjct: 612 VACTDQGEVFTWGDNDEGQLGDGSTSAIPRP 642



 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 82/279 (29%), Positives = 138/279 (49%), Gaps = 7/279 (2%)

Query: 166 VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 225
           V V++   H   +   G+VF+ G+      GH + N    RPR++E+L+G     + AG 
Sbjct: 392 VAVNSGGKHCLALSSEGEVFSWGEAEDGKLGHGNRNS-CDRPRVIESLRGKEVVDIAAGG 450

Query: 226 NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSV-VQIAAGPSYMLAV 284
             +  +T  G + T G   +G+LGHGD+ D+  PK +  L+ V  + V   +G +  L +
Sbjct: 451 AHSACITSTGELFTWGKGRYGRLGHGDSEDQMKPKLVEALKGVRVIDVACGSGDAQTLCI 510

Query: 285 TGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           T +  V+S+G G    LG G       P+ ++    +G  VV+V  G +  VAL  SG V
Sbjct: 511 TDDDSVWSWGDGDYGKLGRGGSDGCKIPQKVEALIGQG--VVKVECGSQFSVALTKSGCV 568

Query: 345 YTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGF 404
           YTWGKG    LGHG +     P  +++L+    + +           D G V+ +G    
Sbjct: 569 YTWGKGDYHRLGHGSDDHVRRPRKVAALQGKNVISIATGSLHCVACTDQGEVFTWGDNDE 628

Query: 405 GSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV 443
           G LG    G +  + RPR++ +L+   +++++ G  H++
Sbjct: 629 GQLG---DGSTSAIPRPRLVAALQGKKINRVACGSAHSL 664



 Score =  109 bits (273), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 112/398 (28%), Positives = 172/398 (43%), Gaps = 56/398 (14%)

Query: 96  FLQSVEHSSDIVETSAGNMQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSF 154
            L+S++H           + + +G  H L +S+   VFS G +  G LGHG   + C   
Sbjct: 380 LLESIQH------VHIKKVAVNSGGKHCLALSSEGEVFSWGEAEDGKLGHGNRNS-CDRP 432

Query: 155 TRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALK 214
             I       VV ++A   H+A +  +G++FT G       GH D+   + +P+LVEALK
Sbjct: 433 RVIESLRGKEVVDIAAGGAHSACITSTGELFTWGKGRYGRLGHGDSEDQM-KPKLVEALK 491

Query: 215 GVPCKQVTAGLNFTGFLTIRGH--VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV 272
           GV    V  G      L I     V + G   +G+LG G +     P+ +  L   G VV
Sbjct: 492 GVRVIDVACGSGDAQTLCITDDDSVWSWGDGDYGKLGRGGSDGCKIPQKVEALIGQG-VV 550

Query: 273 QIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGD 332
           ++  G  + +A+T +G VY++G G    LGHG      +PR +     +G +V+ ++ G 
Sbjct: 551 KVECGSQFSVALTKSGCVYTWGKGDYHRLGHGSDDHVRRPRKVAAL--QGKNVISIATGS 608

Query: 333 EHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVD 392
            H VA    G V+TWG    G LG G      +P P           V A + K    V 
Sbjct: 609 LHCVACTDQGEVFTWGDNDEGQLGDGST--SAIPRPR---------LVAALQGKKINRVA 657

Query: 393 TGSVYGFGW----------------MGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQI- 435
            GS +   W                M +  L    + ++  VLR R+   +  HH S + 
Sbjct: 658 CGSAHSLAWSTSKPVNAGKLPVQVPMEYNHL----QNITMPVLRNRL---VLLHHFSDLF 710

Query: 436 --STGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCL 471
             S  ++  +    RG+L    +  +  +G DTLRG L
Sbjct: 711 CPSIPMFDLL----RGKL-ADENGSKPLVGLDTLRGVL 743



 Score = 84.7 bits (208), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 69/247 (27%), Positives = 119/247 (48%), Gaps = 18/247 (7%)

Query: 235 GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
           G +   G N  GQLG   G  +  PTP  ++A L  V    Q+  G   + AV      Y
Sbjct: 308 GQIWGWGHNHRGQLGGVEGAKVKLPTPCDALAALRPV----QLIGGEQTLFAV------Y 357

Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 351
           + G G+   LG G       P  +++ +   I  V V++G +H +AL S G V++WG+  
Sbjct: 358 ATGYGAGGRLGIGGTESVSSPTLLESIQHVHIKKVAVNSGGKHCLALSSEGEVFSWGEAE 417

Query: 352 CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 411
            G LGHG+      P  + SL+    V + A    +  +  TG ++ +G   +G LG   
Sbjct: 418 DGKLGHGNRNSCDRPRVIESLRGKEVVDIAAGGAHSACITSTGELFTWGKGRYGRLG--- 474

Query: 412 RGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG 469
            G S+  ++P+++++L+   V  ++  +G   T+ +TD   ++ +GD +  +LG     G
Sbjct: 475 HGDSEDQMKPKLVEALKGVRVIDVACGSGDAQTLCITDDDSVWSWGDGDYGKLGRGGSDG 534

Query: 470 CLEPTEI 476
           C  P ++
Sbjct: 535 CKIPQKV 541



 Score = 52.0 bits (123), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 42/174 (24%), Positives = 80/174 (45%), Gaps = 23/174 (13%)

Query: 305 EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKT 364
           ++HDE   + +Q   R+          D+  ++   SG ++ WG  + G LG  +     
Sbjct: 283 QEHDE---QLLQWLSRRP---------DDWTLSWGGSGQIWGWGHNHRGQLGGVEGAKVK 330

Query: 365 LPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRIL 424
           LP P  +L +   VQ+   ++  F +  T         G+G+ G    G ++ V  P +L
Sbjct: 331 LPTPCDALAALRPVQLIGGEQTLFAVYAT---------GYGAGGRLGIGGTESVSSPTLL 381

Query: 425 DSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 476
           +S++  H+ +++  +G  H + ++  G +F +G+ E  +LGH     C  P  I
Sbjct: 382 ESIQHVHIKKVAVNSGGKHCLALSSEGEVFSWGEAEDGKLGHGNRNSCDRPRVI 435


>gi|312792299|ref|YP_004025222.1| regulator of chromosome condensation rcc1 [Caldicellulosiruptor
           kristjanssonii 177R1B]
 gi|312179439|gb|ADQ39609.1| regulator of chromosome condensation RCC1 [Caldicellulosiruptor
           kristjanssonii 177R1B]
          Length = 754

 Score =  125 bits (313), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 103/364 (28%), Positives = 162/364 (44%), Gaps = 20/364 (5%)

Query: 114 MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +QI  G YH+L L  + +V++ G +  G  G     T+  S   +       VV ++A  
Sbjct: 49  IQIAAGNYHSLALKGDGTVWAWGWNHWGQCG-----TEESSIIPVKVKGLKDVVAIAAGR 103

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            H+  + + G V+  G N     G+RD       P  V+ LK V    + AG  ++  L 
Sbjct: 104 YHSLTLKKDGTVWAWGSNKDGQLGNRDAGEYSIVPVQVKGLKDVVA--IAAGDGYSLGLK 161

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
             G V   G N   Q+  G   D   P  I  L++   VV IAAG  Y LA+  +G V+ 
Sbjct: 162 KDGTVWCWGLNESIQVIDGSNKDFSVPFQIKGLKD---VVAIAAGKDYSLALKKDGTVWM 218

Query: 293 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 352
           +    N+        DE  P  +Q    K   VV ++AG  H +AL   G V+ WG  Y 
Sbjct: 219 WEYKYNYYEQLRRGADEYSPVPVQVEGLK--DVVAIAAGRYHSLALKKDGTVWAWGNNYY 276

Query: 353 GALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDR 412
           G LG+G   D   P  + +LK    V + A +  +  L   G+++ +G   +G LG    
Sbjct: 277 GQLGNGKSEDSYDPVQVKNLKD--VVAIAAGENHSLALKKDGTIWAWGDNEWGQLG---N 331

Query: 413 GVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLE 472
            +S+K+  P    SL+   V  I+ G  H++ +   G ++ +G+N   QLG+        
Sbjct: 332 SISEKLCVPVQFKSLK--DVVAIAAGCEHSLALKKDGTVWSWGNNYYGQLGNGNSIDSYV 389

Query: 473 PTEI 476
           P ++
Sbjct: 390 PVQV 393



 Score =  118 bits (295), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 104/402 (25%), Positives = 182/402 (45%), Gaps = 68/402 (16%)

Query: 114 MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           + I  GRYH+L L  + +V++ G++  G LG+G       S+  +   +   VV ++A E
Sbjct: 250 VAIAAGRYHSLALKKDGTVWAWGNNYYGQLGNGKSED---SYDPVQVKNLKDVVAIAAGE 306

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
           NH+  + + G ++  GDN     G+  + + +  P   ++LK V    + AG   +  L 
Sbjct: 307 NHSLALKKDGTIWAWGDNEWGQLGNSISEK-LCVPVQFKSLKDVVA--IAAGCEHSLALK 363

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
             G V + G+N +GQLG+G+++D   P  +  L++V   V IA G ++ LA+  +G V++
Sbjct: 364 KDGTVWSWGNNYYGQLGNGNSIDSYVPVQVRGLKDV---VAIATGNAHSLALKKDGTVWA 420

Query: 293 FGSGSNFCLGHGEQHDELQPRAIQ----------------TFRRKGI------------- 323
           +G+     LG+G       P  ++                 F++ G              
Sbjct: 421 WGNNEFGQLGNGTNKSSFVPVQVKGLKDVVAIAAGSDHSLAFKKDGTVWAWGNNEFGQLG 480

Query: 324 --------------------HVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK 363
                                VV V+AG  H +AL   G ++ WG  Y G L  G++I++
Sbjct: 481 NGSGGYGQYYAVPVQVKGLKDVVAVAAGSVHSLALKKDGTIWAWGSNYHGLL--GNDIER 538

Query: 364 T-LPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPR 422
           + +P  +  LK    V + A    + VL   G+V+ +G + F  L    R V   V  P 
Sbjct: 539 SFVPVQVKGLKD--VVAIAAGSNHSLVLKKDGTVWAWGEVWFDLLNENSRLVYSSV--PV 594

Query: 423 ILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 464
            +  L+   V  I+ G +H++ +   G ++ +GDN   QLG+
Sbjct: 595 QIKGLK--DVVAIAAGEHHSLGLKKDGTVWAWGDNFFGQLGN 634



 Score =  115 bits (288), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 99/366 (27%), Positives = 168/366 (45%), Gaps = 22/366 (6%)

Query: 114 MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           + I  GRYH+L L  + +V++ GS+  G LG+        S   +       VV ++A +
Sbjct: 97  VAIAAGRYHSLTLKKDGTVWAWGSNKDGQLGN--RDAGEYSIVPVQVKGLKDVVAIAAGD 154

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            ++  + + G V+  G N S       +N+    P  ++ LK V    + AG +++  L 
Sbjct: 155 GYSLGLKKDGTVWCWGLNESIQV-IDGSNKDFSVPFQIKGLKDVVA--IAAGKDYSLALK 211

Query: 233 IRGHVHTC--GSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 290
             G V       N + QL  G     P P  +  L++V   V IAAG  + LA+  +G V
Sbjct: 212 KDGTVWMWEYKYNYYEQLRRGADEYSPVPVQVEGLKDV---VAIAAGRYHSLALKKDGTV 268

Query: 291 YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKG 350
           +++G+     LG+G+  D   P  ++  +     VV ++AG+ H +AL   G ++ WG  
Sbjct: 269 WAWGNNYYGQLGNGKSEDSYDPVQVKNLK----DVVAIAAGENHSLALKKDGTIWAWGDN 324

Query: 351 YCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFP 410
             G LG+       +P    SLK    V + A    +  L   G+V+ +G   +G LG  
Sbjct: 325 EWGQLGNSISEKLCVPVQFKSLKD--VVAIAAGCEHSLALKKDGTVWSWGNNYYGQLG-- 380

Query: 411 DRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGC 470
             G S     P  +  L+   V  I+TG  H++ +   G ++ +G+NE  QLG+ T +  
Sbjct: 381 -NGNSIDSYVPVQVRGLK--DVVAIATGNAHSLALKKDGTVWAWGNNEFGQLGNGTNKSS 437

Query: 471 LEPTEI 476
             P ++
Sbjct: 438 FVPVQV 443



 Score =  111 bits (278), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 111/433 (25%), Positives = 190/433 (43%), Gaps = 52/433 (12%)

Query: 48  LYPQKFRSLVDLAASQLCALHSI-------YAGMSRNVQIELLNRCNGNWKRVLRFLQSV 100
           + P K + L D+ A      HS+             N   +L NR  G +  V   ++ +
Sbjct: 85  IIPVKVKGLKDVVAIAAGRYHSLTLKKDGTVWAWGSNKDGQLGNRDAGEYSIVPVQVKGL 144

Query: 101 EHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINF- 159
           +   D+V  +AG+       Y   L  + +V+  G +         E+ Q +  +  +F 
Sbjct: 145 K---DVVAIAAGD------GYSLGLKKDGTVWCWGLN---------ESIQVIDGSNKDFS 186

Query: 160 -----PSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHR---DTNRPIFRPRLVE 211
                     VV ++A ++++  + + G V+      ++    R   D   P+  P  VE
Sbjct: 187 VPFQIKGLKDVVAIAAGKDYSLALKKDGTVWMWEYKYNYYEQLRRGADEYSPV--PVQVE 244

Query: 212 ALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSV 271
            LK V    + AG   +  L   G V   G+N +GQLG+G + D   P  +  L++V   
Sbjct: 245 GLKDVVA--IAAGRYHSLALKKDGTVWAWGNNYYGQLGNGKSEDSYDPVQVKNLKDV--- 299

Query: 272 VQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG 331
           V IAAG ++ LA+  +G ++++G      LG+        P   ++ +     VV ++AG
Sbjct: 300 VAIAAGENHSLALKKDGTIWAWGDNEWGQLGNSISEKLCVPVQFKSLK----DVVAIAAG 355

Query: 332 DEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 391
            EH +AL   G V++WG  Y G LG+G+ ID  +P  +  LK    V +      +  L 
Sbjct: 356 CEHSLALKKDGTVWSWGNNYYGQLGNGNSIDSYVPVQVRGLKD--VVAIATGNAHSLALK 413

Query: 392 DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRL 451
             G+V+ +G   FG LG    G +     P  +  L+   V  I+ G  H++     G +
Sbjct: 414 KDGTVWAWGNNEFGQLG---NGTNKSSFVPVQVKGLK--DVVAIAAGSDHSLAFKKDGTV 468

Query: 452 FGFGDNERAQLGH 464
           + +G+NE  QLG+
Sbjct: 469 WAWGNNEFGQLGN 481



 Score =  105 bits (263), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 97/359 (27%), Positives = 171/359 (47%), Gaps = 27/359 (7%)

Query: 114 MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           + I  G  H+L L  + +V+S G++  G LG+G       S+  +       VV ++   
Sbjct: 350 VAIAAGCEHSLALKKDGTVWSWGNNYYGQLGNGNSID---SYVPVQVRGLKDVVAIATGN 406

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            H+  + + G V+  G+N     G+  TN+  F P  V+ LK V    + AG + +    
Sbjct: 407 AHSLALKKDGTVWAWGNNEFGQLGN-GTNKSSFVPVQVKGLKDVVA--IAAGSDHSLAFK 463

Query: 233 IRGHVHTCGSNTHGQLGHGDT---LDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 289
             G V   G+N  GQLG+G          P  +  L++V   V +AAG  + LA+  +G 
Sbjct: 464 KDGTVWAWGNNEFGQLGNGSGGYGQYYAVPVQVKGLKDV---VAVAAGSVHSLALKKDGT 520

Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH-VVRVSAGDEHVVALDSSGYVYTWG 348
           ++++GS  N+   HG   ++++ R+    + KG+  VV ++AG  H + L   G V+ WG
Sbjct: 521 IWAWGS--NY---HGLLGNDIE-RSFVPVQVKGLKDVVAIAAGSNHSLVLKKDGTVWAWG 574

Query: 349 KGYCGALGHGDE-IDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSL 407
           + +   L      +  ++P  +  LK    V + A +  +  L   G+V+ +G   FG L
Sbjct: 575 EVWFDLLNENSRLVYSSVPVQIKGLKD--VVAIAAGEHHSLGLKKDGTVWAWGDNFFGQL 632

Query: 408 GFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDT 466
           G   R      L P  +  L+   +  I+TG +H++ +   G ++ +G+N   QLG++T
Sbjct: 633 GNSPR--EKYSLVPVQVKGLK--DILAIATGEWHSLAIKKDGTVWAWGENSTGQLGNET 687



 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 97/357 (27%), Positives = 160/357 (44%), Gaps = 24/357 (6%)

Query: 114 MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           + I TG  H+L L  + +V++ G++  G LG+G   T   SF  +       VV ++A  
Sbjct: 400 VAIATGNAHSLALKKDGTVWAWGNNEFGQLGNG---TNKSSFVPVQVKGLKDVVAIAAGS 456

Query: 173 NHAAFVLQSGQVFTCGDNS--SFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
           +H+    + G V+  G+N       G     +    P  V+ LK V    V AG   +  
Sbjct: 457 DHSLAFKKDGTVWAWGNNEFGQLGNGSGGYGQYYAVPVQVKGLKDVVA--VAAGSVHSLA 514

Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG--SVVQIAAGPSYMLAVTGNG 288
           L   G +   GSN HG LG+         +S  P++  G   VV IAAG ++ L +  +G
Sbjct: 515 LKKDGTIWAWGSNYHGLLGN------DIERSFVPVQVKGLKDVVAIAAGSNHSLVLKKDG 568

Query: 289 VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 348
            V+++G      L    ++  L   ++    +    VV ++AG+ H + L   G V+ WG
Sbjct: 569 TVWAWGEVWFDLL---NENSRLVYSSVPVQIKGLKDVVAIAAGEHHSLGLKKDGTVWAWG 625

Query: 349 KGYCGALGHGDEIDKTL-PEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSL 407
             + G LG+      +L P  +  LK  LA+     +  +  +   G+V+ +G    G L
Sbjct: 626 DNFFGQLGNSPREKYSLVPVQVKGLKDILAI--ATGEWHSLAIKKDGTVWAWGENSTGQL 683

Query: 408 GFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 464
           G    G       P  +  ++   V  IS G YH++ +   G ++G+G N R QLG+
Sbjct: 684 GNETSGKDKYSYVPVQVKGIK--DVLAISAGSYHSLALKKDGTVWGWGANARGQLGN 738



 Score =  102 bits (254), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 83/304 (27%), Positives = 135/304 (44%), Gaps = 14/304 (4%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           VV ++A   H+  + + G V+  G+N     G+  +    + P  V+ LK V    + AG
Sbjct: 249 VVAIAAGRYHSLALKKDGTVWAWGNNYYGQLGNGKSEDS-YDPVQVKNLKDVVA--IAAG 305

Query: 225 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 284
            N +  L   G +   G N  GQLG+  +     P     L++V   V IAAG  + LA+
Sbjct: 306 ENHSLALKKDGTIWAWGDNEWGQLGNSISEKLCVPVQFKSLKDV---VAIAAGCEHSLAL 362

Query: 285 TGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
             +G V+S+G+     LG+G   D   P  ++  +     VV ++ G+ H +AL   G V
Sbjct: 363 KKDGTVWSWGNNYYGQLGNGNSIDSYVPVQVRGLK----DVVAIATGNAHSLALKKDGTV 418

Query: 345 YTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGF 404
           + WG    G LG+G      +P  +  LK    V + A    +      G+V+ +G   F
Sbjct: 419 WAWGNNEFGQLGNGTNKSSFVPVQVKGLKD--VVAIAAGSDHSLAFKKDGTVWAWGNNEF 476

Query: 405 GSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 464
           G LG    G       P  +  L+   V  ++ G  H++ +   G ++ +G N    LG+
Sbjct: 477 GQLGNGSGGYGQYYAVPVQVKGLK--DVVAVAAGSVHSLALKKDGTIWAWGSNYHGLLGN 534

Query: 465 DTLR 468
           D  R
Sbjct: 535 DIER 538



 Score = 96.7 bits (239), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 89/317 (28%), Positives = 144/317 (45%), Gaps = 26/317 (8%)

Query: 164 HVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTA 223
           +++Q++A   H+  +   G V+  G N    CG  +++     P  V+ LK V    + A
Sbjct: 47  NIIQIAAGNYHSLALKGDGTVWAWGWNHWGQCGTEESS---IIPVKVKGLKDVVA--IAA 101

Query: 224 GLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG--SVVQIAAGPSYM 281
           G   +  L   G V   GSN  GQLG+ D  +     SI P++  G   VV IAAG  Y 
Sbjct: 102 GRYHSLTLKKDGTVWAWGSNKDGQLGNRDAGEY----SIVPVQVKGLKDVVAIAAGDGYS 157

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH-VVRVSAGDEHVVALDS 340
           L +  +G V+ +G   +  +  G   D   P     F+ KG+  VV ++AG ++ +AL  
Sbjct: 158 LGLKKDGTVWCWGLNESIQVIDGSNKDFSVP-----FQIKGLKDVVAIAAGKDYSLALKK 212

Query: 341 SGYVYTW--GKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYG 398
            G V+ W     Y   L  G +    +P  +  LK    V + A +  +  L   G+V+ 
Sbjct: 213 DGTVWMWEYKYNYYEQLRRGADEYSPVPVQVEGLKD--VVAIAAGRYHSLALKKDGTVWA 270

Query: 399 FGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNE 458
           +G   +G LG    G S+    P  + +L+   V  I+ G  H++ +   G ++ +GDNE
Sbjct: 271 WGNNYYGQLG---NGKSEDSYDPVQVKNLK--DVVAIAAGENHSLALKKDGTIWAWGDNE 325

Query: 459 RAQLGHDTLRGCLEPTE 475
             QLG+        P +
Sbjct: 326 WGQLGNSISEKLCVPVQ 342



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 73/268 (27%), Positives = 127/268 (47%), Gaps = 33/268 (12%)

Query: 100 VEHSSDIVETSAGNMQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRIN 158
           V+   D+V  +AG++       H+L L  + ++++ GS+  G+LG+  E     SF  + 
Sbjct: 496 VKGLKDVVAVAAGSV-------HSLALKKDGTIWAWGSNYHGLLGNDIER----SFVPVQ 544

Query: 159 FPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFR--PRLVEALKGV 216
                 VV ++A  NH+  + + G V+  G+   +     + +R ++   P  ++ LK V
Sbjct: 545 VKGLKDVVAIAAGSNHSLVLKKDGTVWAWGE--VWFDLLNENSRLVYSSVPVQIKGLKDV 602

Query: 217 PCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPK-SIAPLEEVG--SVVQ 273
               + AG + +  L   G V   G N  GQLG     + P  K S+ P++  G   ++ 
Sbjct: 603 VA--IAAGEHHSLGLKKDGTVWAWGDNFFGQLG-----NSPREKYSLVPVQVKGLKDILA 655

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGH---GEQHDELQPRAIQTFRRKGIHVVRVSA 330
           IA G  + LA+  +G V+++G  S   LG+   G+      P  ++  +     V+ +SA
Sbjct: 656 IATGEWHSLAIKKDGTVWAWGENSTGQLGNETSGKDKYSYVPVQVKGIK----DVLAISA 711

Query: 331 GDEHVVALDSSGYVYTWGKGYCGALGHG 358
           G  H +AL   G V+ WG    G LG+G
Sbjct: 712 GSYHSLALKKDGTVWGWGANARGQLGNG 739


>gi|115304951|gb|AAI23843.1| Hect domain and RLD 4 [Bos taurus]
          Length = 853

 Score =  125 bits (313), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 88/276 (31%), Positives = 140/276 (50%), Gaps = 10/276 (3%)

Query: 204 IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 263
           +  PR  +       + V  GL  T F+   G V+TCG N  GQLGH  +  R  P+ + 
Sbjct: 22  VLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKS--RKKPEQVV 79

Query: 264 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH-GEQHDELQPRAIQTFRRKG 322
            L+   ++V ++ G ++ LA+   G VY++G  S+  LG  G +     PR I++     
Sbjct: 80  ALD-AQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSL--SD 136

Query: 323 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTL-PEPLSSLKSHLAVQVC 381
           I +V+V+ G  H +AL  +  V+ WG+   G LG G +  K   P+ + SL     +Q+ 
Sbjct: 137 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQIA 196

Query: 382 ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYH 441
           A    +FVL  +G+++G+G   FG LG  D   +D+ + P +L SLR   +  I  G  H
Sbjct: 197 AGGAHSFVLTLSGAIFGWGRNKFGQLGLNDE--NDRYV-PNLLKSLRTQKIVYICCGEDH 253

Query: 442 TVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF 477
           T  +T  G +F FG     QLGH++    + P ++F
Sbjct: 254 TAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVF 289



 Score =  122 bits (306), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 103/333 (30%), Positives = 154/333 (46%), Gaps = 13/333 (3%)

Query: 135 GSSLCGVLGHGPETTQCVSFTRI-NFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSF 193
           G++  G LG G    + V   R  +F     V  V     H  FVL  G V+TCG N   
Sbjct: 5   GNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLG 64

Query: 194 CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGH-GD 252
             GH  + +   +P  V AL       V+ G   T  L  +G V+  G ++ GQLG  G 
Sbjct: 65  QLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGS 121

Query: 253 TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHG-EQHDELQ 311
                 P++I  L ++  +VQ+A G  + LA++    V+ +G      LG G +   +  
Sbjct: 122 EECIRVPRNIKSLSDI-QIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQAS 180

Query: 312 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSS 371
           P+ I++    GI  ++++AG  H   L  SG ++ WG+   G LG  DE D+ +P  L S
Sbjct: 181 PQLIKSLL--GIPFMQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKS 238

Query: 372 LKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHH 431
           L++   V +C  +  T  L   G V+ FG  G+G LG      +   + PR +  L    
Sbjct: 239 LRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG---HNSTSHEINPRKVFELMGSI 295

Query: 432 VSQISTGLYHT-VVVTDRGRLFGFGDNERAQLG 463
           V+QI+ G  HT   V   GR++ FG     QLG
Sbjct: 296 VTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 81/291 (27%), Positives = 138/291 (47%), Gaps = 8/291 (2%)

Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 179
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V VS  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVSCGEAHTLALN 100

Query: 180 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 239
             GQV+  G +S    G   +   I  PR +++L  +   QV  G   +  L+    V  
Sbjct: 101 DKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFC 160

Query: 240 CGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
            G N +GQLG G D   + +P+ I  L  +   +QIAAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKYGQLGLGIDCKKQASPQLIKSLLGI-PFMQIAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 299 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 358
             LG  +++D   P  +++ R + I  V +  G++H  AL   G V+T+G G  G LGH 
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRTQKI--VYICCGEDHTAALTKEGGVFTFGAGGYGQLGHN 277

Query: 359 DEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLG 408
               +  P  +  L   +  Q+ C R+  +  +  +G +Y FG  G G LG
Sbjct: 278 STSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 83/274 (30%), Positives = 132/274 (48%), Gaps = 10/274 (3%)

Query: 98  QSVEHSSDIVETSAGNM-QITTGRYHTLLISNS-SVFSCGSSLCGVLGH-GPETTQCVSF 154
           +S +    +V   A N+  ++ G  HTL +++   V++ G    G LG  G E  +C+  
Sbjct: 70  KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSE--ECIRV 127

Query: 155 TR-INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEAL 213
            R I   S   +VQV+    H+  + ++ +VF  G N     G     +    P+L+++L
Sbjct: 128 PRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQASPQLIKSL 187

Query: 214 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
            G+P  Q+ AG   +  LT+ G +   G N  GQLG  D  DR  P  +  L     +V 
Sbjct: 188 LGIPFMQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLR-TQKIVY 246

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           I  G  +  A+T  G V++FG+G    LGH     E+ PR +  F   G  V +++ G +
Sbjct: 247 ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQ 304

Query: 334 HVVA-LDSSGYVYTWGKGYCGALGHGDEIDKTLP 366
           H  A + SSG +Y++G G  G LG G   ++  P
Sbjct: 305 HTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338



 Score = 80.1 bits (196), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 76/251 (30%), Positives = 119/251 (47%), Gaps = 17/251 (6%)

Query: 70  IYA-GMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLISN 128
           +YA G+  + Q+ LL       +  +R  ++++  SDI       +Q+  G YH+L +S 
Sbjct: 105 VYAWGLDSDGQLGLLGS-----EECIRVPRNIKSLSDI-----QIVQVACGYYHSLALSK 154

Query: 129 SS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTC 187
           +S VF  G +  G LG G +  +  S   I        +Q++A   H+  +  SG +F  
Sbjct: 155 ASEVFCWGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQIAAGGAHSFVLTLSGAIFGW 214

Query: 188 GDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQ 247
           G N     G  D N   + P L+++L+      +  G + T  LT  G V T G+  +GQ
Sbjct: 215 GRNKFGQLGLNDENDR-YVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQ 273

Query: 248 LGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVVYSFGSGSNFCLGHGE 305
           LGH  T     P+ +   E +GS+V QIA G  +  A V  +G +YSFG G N  LG G 
Sbjct: 274 LGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGS 331

Query: 306 QHDELQPRAIQ 316
             +   P  ++
Sbjct: 332 TSNRKSPFTVK 342


>gi|301618542|ref|XP_002938670.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6-like [Xenopus
           (Silurana) tropicalis]
          Length = 1029

 Score =  125 bits (313), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 85/254 (33%), Positives = 138/254 (54%), Gaps = 16/254 (6%)

Query: 219 KQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGP 278
           ++V+ G   T +L   G + +CG N +GQLG     +  + + I+ LE   ++V I+ G 
Sbjct: 37  QKVSCGEKHTLYLLEDGTLLSCGQNPYGQLGRKS--NNSSIEQISSLE-AQTIVDISCGT 93

Query: 279 SYMLAVTGNGVVYSFGSGSNFCLGHGE-QHDELQPRAIQ-TFRRKGIHVVRVSAGDEHVV 336
           ++ +AV+  G +YS+G GS   LG G        P+ I   F  K   ++++S G+ H +
Sbjct: 94  NHSVAVSDEGSIYSWGDGSEGQLGTGNLSSRNFTPKKITGLFNTK---IIQISCGNFHSL 150

Query: 337 ALDSSGYVYTWGKGYCGALGHGDEI-DKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGS 395
           AL   G V++WG+  CG LG G +I ++  P+ + SLK    VQV A   ++F L  +G+
Sbjct: 151 ALSEDGRVFSWGQNKCGQLGLGSQIINQATPQLVKSLKGIPLVQVTAGGSQSFALSMSGT 210

Query: 396 VYGFGWMGFGSLGF---PDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLF 452
           V+ +G    G LGF   P +G      +P  ++SLR   V+ IS G  HT V++  G ++
Sbjct: 211 VFAWGKNNAGQLGFKSDPMKGT----FKPHAVNSLRNLGVAYISCGEEHTAVLSKDGSVY 266

Query: 453 GFGDNERAQLGHDT 466
            FGD+   QLG ++
Sbjct: 267 TFGDDTHGQLGQNS 280



 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 95/314 (30%), Positives = 152/314 (48%), Gaps = 21/314 (6%)

Query: 159 FPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPC 218
           F S   V +VS  E H  ++L+ G + +CG N     G +  N  I     + +L+    
Sbjct: 30  FQSQECVQKVSCGEKHTLYLLEDGTLLSCGQNPYGQLGRKSNNSSI---EQISSLEAQTI 86

Query: 219 KQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRP-TPKSIAPLEEVGSVVQIAAG 277
             ++ G N +  ++  G +++ G  + GQLG G+   R  TPK I  L     ++QI+ G
Sbjct: 87  VDISCGTNHSVAVSDEGSIYSWGDGSEGQLGTGNLSSRNFTPKKITGLFNT-KIIQISCG 145

Query: 278 PSYMLAVTGNGVVYSFGSGSNFCLGHGEQH-DELQPRAIQTFRRKGIHVVRVSAGDEHVV 336
             + LA++ +G V+S+G      LG G Q  ++  P+ +++   KGI +V+V+AG     
Sbjct: 146 NFHSLALSEDGRVFSWGQNKCGQLGLGSQIINQATPQLVKSL--KGIPLVQVTAGGSQSF 203

Query: 337 ALDSSGYVYTWGKGYCGALG-HGDEIDKTL-PEPLSSLKSHLAVQVCARKRKTFVLVDTG 394
           AL  SG V+ WGK   G LG   D +  T  P  ++SL++     +   +  T VL   G
Sbjct: 204 ALSMSGTVFAWGKNNAGQLGFKSDPMKGTFKPHAVNSLRNLGVAYISCGEEHTAVLSKDG 263

Query: 395 SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 454
           SVY FG    G LG   +   ++   P+ ++   A  VSQ++ G YHT+       L+ F
Sbjct: 264 SVYTFGDDTHGQLG---QNSGNQTSVPQKIEDY-AGQVSQVACGRYHTL-------LYVF 312

Query: 455 GDNERAQLGHDTLR 468
             N     G  +LR
Sbjct: 313 SCNRIVSFGKGSLR 326



 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 77/301 (25%), Positives = 137/301 (45%), Gaps = 10/301 (3%)

Query: 104 SDIVETSAGNMQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSA 162
           +D  ++     +++ G  HTL L+ + ++ SCG +  G LG     +   S  +I+   A
Sbjct: 27  NDYFQSQECVQKVSCGEKHTLYLLEDGTLLSCGQNPYGQLGRKSNNS---SIEQISSLEA 83

Query: 163 AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 222
             +V +S   NH+  V   G +++ GD S    G  + +   F P+ +  L      Q++
Sbjct: 84  QTIVDISCGTNHSVAVSDEGSIYSWGDGSEGQLGTGNLSSRNFTPKKITGLFNTKIIQIS 143

Query: 223 AGLNFTGFLTIRGHVHTCGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 281
            G   +  L+  G V + G N  GQLG G   +++ TP+ +  L+ +  +VQ+ AG S  
Sbjct: 144 CGNFHSLALSEDGRVFSWGQNKCGQLGLGSQIINQATPQLVKSLKGI-PLVQVTAGGSQS 202

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDE--LQPRAIQTFRRKGIHVVRVSAGDEHVVALD 339
            A++ +G V+++G  +   LG      +   +P A+ + R  G  V  +S G+EH   L 
Sbjct: 203 FALSMSGTVFAWGKNNAGQLGFKSDPMKGTFKPHAVNSLRNLG--VAYISCGEEHTAVLS 260

Query: 340 SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGF 399
             G VYT+G    G LG       ++P+ +      ++   C R      +     +  F
Sbjct: 261 KDGSVYTFGDDTHGQLGQNSGNQTSVPQKIEDYAGQVSQVACGRYHTLLYVFSCNRIVSF 320

Query: 400 G 400
           G
Sbjct: 321 G 321



 Score = 42.7 bits (99), Expect = 0.43,   Method: Compositional matrix adjust.
 Identities = 36/131 (27%), Positives = 55/131 (41%), Gaps = 17/131 (12%)

Query: 344 VYTWGKGYCG--ALGHGDEIDKTLPEPLSSLKSHLAVQVCARK-----RKTFVLVDTGSV 396
           +Y WG    G  AL  G++      E       +   Q C +K     + T  L++ G++
Sbjct: 1   MYCWGDNCFGQLALLQGEKEVVHFKE-----NDYFQSQECVQKVSCGEKHTLYLLEDGTL 55

Query: 397 YGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGD 456
              G   +G LG      S + +      SL A  +  IS G  H+V V+D G ++ +GD
Sbjct: 56  LSCGQNPYGQLGRKSNNSSIEQI-----SSLEAQTIVDISCGTNHSVAVSDEGSIYSWGD 110

Query: 457 NERAQLGHDTL 467
               QLG   L
Sbjct: 111 GSEGQLGTGNL 121


>gi|296486675|tpg|DAA28788.1| TPA: hect domain and RLD 6-like isoform 1 [Bos taurus]
          Length = 980

 Score =  125 bits (313), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 92/275 (33%), Positives = 135/275 (49%), Gaps = 7/275 (2%)

Query: 193 FCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGD 252
           + C      RP+ R R V A  G    Q  +G + +  L   G V +CG N+ GQLG   
Sbjct: 2   YFCWRAGGRRPL-RERQVCA-GGNTLLQAASGEHHSLLLLSDGTVQSCGDNSRGQLGRKG 59

Query: 253 TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGE-QHDELQ 311
           T     P+ I  LE + +V  ++ G  + LAV   G V+++G+ S   LG GE +     
Sbjct: 60  TPRGEQPERIPALETL-NVALVSCGKEHSLAVCHKGRVFAWGAASEGQLGIGEFKETTFI 118

Query: 312 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEI-DKTLPEPLS 370
           P+ I+T    GI +++V+ G  H VAL   G V++WG    G LG G E   +  P+ + 
Sbjct: 119 PKKIKTL--AGIKIIQVACGHYHSVALSEDGQVFSWGTNSHGQLGLGKEFPSQASPQRVR 176

Query: 371 SLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAH 430
           SL+     QV A    +F L  +G+ +G+G    G L         +  +P  + +L+  
Sbjct: 177 SLEGIPLAQVAAGGHHSFALSLSGTSFGWGSNSAGQLALSGNNAPVQRYKPVSIGALKTL 236

Query: 431 HVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHD 465
            V  IS G  HT V+T  G++F FGDN   QLGHD
Sbjct: 237 GVVSISCGYKHTAVLTQDGKVFTFGDNSYGQLGHD 271



 Score =  101 bits (252), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 84/297 (28%), Positives = 151/297 (50%), Gaps = 14/297 (4%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           ++Q ++ E+H+  +L  G V +CGDNS    G + T R   +P  + AL+ +    V+ G
Sbjct: 25  LLQAASGEHHSLLLLSDGTVQSCGDNSRGQLGRKGTPRGE-QPERIPALETLNVALVSCG 83

Query: 225 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRP-TPKSIAPLEEVGSVVQIAAGPSYMLA 283
              +  +  +G V   G+ + GQLG G+  +    PK I  L  +  ++Q+A G  + +A
Sbjct: 84  KEHSLAVCHKGRVFAWGAASEGQLGIGEFKETTFIPKKIKTLAGI-KIIQVACGHYHSVA 142

Query: 284 VTGNGVVYSFGSGSNFCLGHGEQH-DELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
           ++ +G V+S+G+ S+  LG G++   +  P+ +++   +GI + +V+AG  H  AL  SG
Sbjct: 143 LSEDGQVFSWGTNSHGQLGLGKEFPSQASPQRVRSL--EGIPLAQVAAGGHHSFALSLSG 200

Query: 343 YVYTWGKGYCGAL---GHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGF 399
             + WG    G L   G+   + +  P  + +LK+   V +    + T VL   G V+ F
Sbjct: 201 TSFGWGSNSAGQLALSGNNAPVQRYKPVSIGALKTLGVVSISCGYKHTAVLTQDGKVFTF 260

Query: 400 GWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV-VTDRGRLFGFG 455
           G   +G LG      + +   P++++ +    VSQI  G  HT+  +   G++  FG
Sbjct: 261 GDNSYGQLG---HDPTAEKRGPQLVERIEG-LVSQIDCGSDHTLAYIYTTGQVVSFG 313



 Score = 99.0 bits (245), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 85/294 (28%), Positives = 136/294 (46%), Gaps = 13/294 (4%)

Query: 114 MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHG--PETTQCVSFTRINFPSAAHVVQVSA 170
           +Q  +G +H+LL+ S+ +V SCG +  G LG    P   Q     RI      +V  VS 
Sbjct: 26  LQAASGEHHSLLLLSDGTVQSCGDNSRGQLGRKGTPRGEQP---ERIPALETLNVALVSC 82

Query: 171 SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
            + H+  V   G+VF  G  S    G  +     F P+ ++ L G+   QV  G   +  
Sbjct: 83  GKEHSLAVCHKGRVFAWGAASEGQLGIGEFKETTFIPKKIKTLAGIKIIQVACGHYHSVA 142

Query: 231 LTIRGHVHTCGSNTHGQLGHGDTL-DRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 289
           L+  G V + G+N+HGQLG G     + +P+ +  LE +  + Q+AAG  +  A++ +G 
Sbjct: 143 LSEDGQVFSWGTNSHGQLGLGKEFPSQASPQRVRSLEGI-PLAQVAAGGHHSFALSLSGT 201

Query: 290 VYSFGSGSNFCL---GHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYT 346
            + +GS S   L   G+       +P +I   +  G  VV +S G +H   L   G V+T
Sbjct: 202 SFGWGSNSAGQLALSGNNAPVQRYKPVSIGALKTLG--VVSISCGYKHTAVLTQDGKVFT 259

Query: 347 WGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 400
           +G    G LGH    +K  P+ +  ++  ++   C        +  TG V  FG
Sbjct: 260 FGDNSYGQLGHDPTAEKRGPQLVERIEGLVSQIDCGSDHTLAYIYTTGQVVSFG 313


>gi|338717875|ref|XP_001918080.2| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein ligase
            HERC1-like [Equus caballus]
          Length = 4860

 Score =  125 bits (313), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 101/339 (29%), Positives = 166/339 (48%), Gaps = 17/339 (5%)

Query: 115  QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQV---SA 170
            Q+  G+  T +I +N +V +CG    G LG G      V  T I+      V Q+     
Sbjct: 4030 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHV-LTVISALQGFVVTQLVTSCG 4088

Query: 171  SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
            S+ H+  + +SG+VF+ GD      GH +++R   RPR +EAL+G    Q++ G   +  
Sbjct: 4089 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQMSCGFKHSAV 4147

Query: 231  LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSVVQIAAGPSYMLAVTGNG 288
            +T  G + T G+  +G+LG G+T ++  P+ +  LE  ++G   Q+A G ++ LAV+ +G
Sbjct: 4148 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIG---QVACGLNHTLAVSTDG 4204

Query: 289  -VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 347
             +V++FG G    LG G    +  P+ +      GI + +V+ G +  VAL   G+VYT+
Sbjct: 4205 SMVWAFGDGDYGKLGLGNSTAKSSPQKVDVL--CGIGIKKVACGTQFSVALTKDGHVYTF 4262

Query: 348  GKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSL 407
            G+     L  G   +   P+ +  L   +   V      T  L   G VY +G    G L
Sbjct: 4263 GQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASNGDVYAWGSNSEGQL 4322

Query: 408  GFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT 446
            G    G ++ V  P ++  L+  ++ QIS G  H+   T
Sbjct: 4323 GL---GHTNHVREPTLVTVLQGKNIRQISAGRCHSAAWT 4358



 Score =  109 bits (273), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 91/315 (28%), Positives = 144/315 (45%), Gaps = 25/315 (7%)

Query: 160 PSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTN------RPIFRPRLVEAL 213
           PS +    + A +     +   G V  CG  S    G  D+N      +  F P    ++
Sbjct: 400 PSFSDAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPH--RSI 457

Query: 214 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
           K V   + + G   T   T  G V + G   +G+LGHG++  +  PK I    +   VV 
Sbjct: 458 KKVSSSKGSDG--HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVC 515

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           ++AG  +  AVT +G +Y++G G    LGHG+ +     R I T  +   +V  VS G  
Sbjct: 516 VSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNS----RNIPTLVKDISNVGEVSCGSS 571

Query: 334 HVVALDSSGY-VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVD 392
           H +AL   G  V+++G G  G LGHGD      P+ + +L+     +VCA  + +  L  
Sbjct: 572 HTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTS 631

Query: 393 TGSVYGFG---WMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRG 449
           TG VY +G    +G GS            LRP++++ L A  +  IS G  H + ++   
Sbjct: 632 TGQVYAWGCGACLGCGS-------SEATALRPKLVEELAATRIVDISIGDSHCLALSHDN 684

Query: 450 RLFGFGDNERAQLGH 464
            ++ +G+N   Q G 
Sbjct: 685 EVYAWGNNSMGQCGQ 699



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 89/266 (33%), Positives = 128/266 (48%), Gaps = 14/266 (5%)

Query: 122 HTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
           HTL   +   VFS G    G LGHG  +TQ              VV VSA   H+A V +
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528

Query: 181 SGQVFTCGDNSSFCCGHRDTN-RPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH-VH 238
            G+++T G+      GH D+N R I  P LV+ +  V   +V+ G + T  L+  G  V 
Sbjct: 529 DGELYTWGEGDFGRLGHGDSNSRNI--PTLVKDISNV--GEVSCGSSHTIALSKDGRTVW 584

Query: 239 TCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
           + G   +G+LGHGDT     PK I  L+ +  + ++ AG    LA+T  G VY++G G+ 
Sbjct: 585 SFGGGDNGKLGHGDTNRVYKPKVIEALQGM-FIRKVCAGSQSSLALTSTGQVYAWGCGA- 642

Query: 299 FCLGHG-EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 357
            CLG G  +   L+P+ ++        +V +S GD H +AL     VY WG    G  G 
Sbjct: 643 -CLGCGSSEATALRPKLVEEL--AATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQ 699

Query: 358 GDEIDK-TLPEPLSSLKSHLAVQVCA 382
           G+     T P+ +S L      Q+ A
Sbjct: 700 GNSTGPITKPKKVSGLDGIAIQQISA 725



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 87/324 (26%), Positives = 150/324 (46%), Gaps = 13/324 (4%)

Query: 160  PSAAHVVQVSASENHAAFVLQS-GQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPC 218
            PS +   QV   +N   FV+Q+ G V  CG+ S    G  +++  +    ++ AL+G   
Sbjct: 4023 PSFSQAQQVICGQN-CTFVIQANGTVLACGEGSYGRLGQGNSDD-LHVLTVISALQGFVV 4080

Query: 219  KQVTAGLNFTGF---LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA 275
             Q+       G    LT  G V + G   +G+LGHG++  +  P+ I  L+    VVQ++
Sbjct: 4081 TQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQG-EEVVQMS 4139

Query: 276  AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHV 335
             G  +   VT +G +++FG+G    LG G   ++  P  +     +G  + +V+ G  H 
Sbjct: 4140 CGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTAL--EGYQIGQVACGLNHT 4197

Query: 336  VALDSSG-YVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 394
            +A+ + G  V+ +G G  G LG G+   K+ P+ +  L      +V    + +  L   G
Sbjct: 4198 LAVSTDGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDG 4257

Query: 395  SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 454
             VY FG      +G P+ G +    RP+ +  L    +  ++ G  HT+ +   G ++ +
Sbjct: 4258 HVYTFGQDRL--IGLPE-GRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASNGDVYAW 4314

Query: 455  GDNERAQLGHDTLRGCLEPTEIFI 478
            G N   QLG        EPT + +
Sbjct: 4315 GSNSEGQLGLGHTNHVREPTLVTV 4338



 Score = 85.5 bits (210), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 69/230 (30%), Positives = 108/230 (46%), Gaps = 11/230 (4%)

Query: 237  VHTCGSNTHGQLGH-GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 295
            V+  G+  HGQL   G  +  P   + AP        Q+  G +    +  NG V + G 
Sbjct: 3998 VYLWGAGRHGQLAEAGRNVMVP---AAAP--SFSQAQQVICGQNCTFVIQANGTVLACGE 4052

Query: 296  GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG-DEHVVALDSSGYVYTWGKGYCGA 354
            GS   LG G   D      I   +   +  +  S G D H +AL  SG V++WG G  G 
Sbjct: 4053 GSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGK 4112

Query: 355  LGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGV 414
            LGHG+   +  P  + +L+    VQ+    + + V+   G ++ FG   +G LG  +   
Sbjct: 4113 LGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN--T 4170

Query: 415  SDKVLRPRILDSLRAHHVSQISTGLYHTVVV-TDRGRLFGFGDNERAQLG 463
            S+K L P  + +L  + + Q++ GL HT+ V TD   ++ FGD +  +LG
Sbjct: 4171 SNKKL-PERVTALEGYQIGQVACGLNHTLAVSTDGSMVWAFGDGDYGKLG 4219



 Score = 59.7 bits (143), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 49/180 (27%), Positives = 82/180 (45%), Gaps = 13/180 (7%)

Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 349
           VY +GS S+  L  G Q   LQP+   +F         + AG      + + G V   GK
Sbjct: 374 VYVWGSNSSHQLVEGTQEKILQPKLAPSFS----DAQTIEAGQYCTFVISTDGSVRACGK 429

Query: 350 GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKR----KTFVLVDTGSVYGFGWMGFG 405
           G  G LG GD  +++  + L + + H +++  +  +     T      G V+ +G   +G
Sbjct: 430 GSYGRLGLGDSNNQSTLKKL-TFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYG 488

Query: 406 SLGFPDRGVSDKVLRPRILD-SLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 464
            LG    G S     P+++   L+   V  +S G  H+  VT+ G L+ +G+ +  +LGH
Sbjct: 489 KLG---HGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGH 545



 Score = 48.9 bits (115), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 41/143 (28%), Positives = 67/143 (46%), Gaps = 9/143 (6%)

Query: 344  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 403
            VY WG G  G L    E  + +  P ++     A QV   +  TFV+   G+V   G   
Sbjct: 3998 VYLWGAGRHGQLA---EAGRNVMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGS 4054

Query: 404  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLY---HTVVVTDRGRLFGFGDNERA 460
            +G LG   +G SD +    ++ +L+   V+Q+ T      H++ +T+ G +F +GD +  
Sbjct: 4055 YGRLG---QGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYG 4111

Query: 461  QLGHDTLRGCLEPTEIFIQEMEE 483
            +LGH        P +I   + EE
Sbjct: 4112 KLGHGNSDRQRRPRQIEALQGEE 4134



 Score = 48.1 bits (113), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 27/100 (27%), Positives = 48/100 (48%), Gaps = 2/100 (2%)

Query: 125 LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQV 184
           L S   V++ G   C  LG G      +    +   +A  +V +S  ++H   +    +V
Sbjct: 629 LTSTGQVYAWGCGAC--LGCGSSEATALRPKLVEELAATRIVDISIGDSHCLALSHDNEV 686

Query: 185 FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           +  G+NS   CG  ++  PI +P+ V  L G+  +Q++AG
Sbjct: 687 YAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAG 726


>gi|118095631|ref|XP_413753.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Gallus gallus]
          Length = 4860

 Score =  125 bits (313), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 100/339 (29%), Positives = 166/339 (48%), Gaps = 17/339 (5%)

Query: 115  QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQV---SA 170
            Q+  G+  T +I +N +V +CG    G LG G      V  T I+      V Q+     
Sbjct: 4030 QVVCGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHV-LTVISALQGFVVTQLVTSCG 4088

Query: 171  SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
            S+ H+  + +SG+VF+ GD      GH +++R   RPR +EAL+G    Q++ G   +  
Sbjct: 4089 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQMSCGFKHSAV 4147

Query: 231  LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSVVQIAAGPSYMLAVTGNG 288
            +T  G + T G+  +G+LG G+T ++  P+ +  LE  ++G   Q+A G ++ +AV+ +G
Sbjct: 4148 VTADGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIG---QVACGLNHTVAVSTDG 4204

Query: 289  -VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 347
             +V++FG G    LG G    +  P+ +      GI + +V+ G +  VAL   G+VYT+
Sbjct: 4205 SMVWAFGDGDYGKLGLGNSTAKSSPQKVDIL--CGIGIKKVACGTQFSVALTKDGHVYTF 4262

Query: 348  GKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSL 407
            G+     L  G   +   P+ +  L       +      T  L  TG VY +G    G L
Sbjct: 4263 GQDRLIGLPEGRARNHNRPQQVPVLSGVFIEDIAVGAEHTLALSSTGDVYAWGSNSEGQL 4322

Query: 408  GFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT 446
            G    G ++ V  P ++  L+  ++ QIS G  H+   T
Sbjct: 4323 GL---GHTNHVREPTLITVLQGKNIRQISAGRCHSAAWT 4358



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 91/315 (28%), Positives = 144/315 (45%), Gaps = 25/315 (7%)

Query: 160 PSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTN------RPIFRPRLVEAL 213
           PS +    + A +     +   G V  CG  S    G  D+N      +  F P    ++
Sbjct: 400 PSFSDAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPH--RSI 457

Query: 214 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
           K V   + + G   T   T  G V + G   +G+LGHG++  +  PK I    +   VV 
Sbjct: 458 KKVSSSKGSDG--HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVC 515

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           ++AG  +  AVT +G +Y++G G    LGHG+ +     R I T  +   +V  VS G  
Sbjct: 516 VSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNS----RNIPTLVKDISNVGEVSCGSS 571

Query: 334 HVVALDSSGY-VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVD 392
           H +AL   G  V+++G G  G LGHGD      P+ + +L+     +VCA  + +  L  
Sbjct: 572 HTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTS 631

Query: 393 TGSVYGFG---WMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRG 449
           TG VY +G    +G GS            LRP++++ L A  +  IS G  H + ++   
Sbjct: 632 TGQVYAWGCGACLGCGS-------SEATALRPKLIEELAATRIVDISIGDSHCLALSHDN 684

Query: 450 RLFGFGDNERAQLGH 464
            ++ +G+N   Q G 
Sbjct: 685 EVYAWGNNSMGQCGQ 699



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 90/327 (27%), Positives = 152/327 (46%), Gaps = 13/327 (3%)

Query: 157  INFPSAAHVVQVSASENHAAFVLQS-GQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 215
            +  PS +   QV   +N   FV+Q+ G V  CG+ S    G  +++  +    ++ AL+G
Sbjct: 4020 VAAPSFSQAQQVVCGQN-CTFVIQANGTVLACGEGSYGRLGQGNSDD-LHVLTVISALQG 4077

Query: 216  VPCKQVTAGLNFTGF---LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV 272
                Q+       G    LT  G V + G   +G+LGHG++  +  P+ I  L+    VV
Sbjct: 4078 FVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQG-EEVV 4136

Query: 273  QIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGD 332
            Q++ G  +   VT +G +++FG+G    LG G   ++  P  +     +G  + +V+ G 
Sbjct: 4137 QMSCGFKHSAVVTADGKLFTFGNGDYGRLGLGNTSNKKLPERVTAL--EGYQIGQVACGL 4194

Query: 333  EHVVALDSSG-YVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 391
             H VA+ + G  V+ +G G  G LG G+   K+ P+ +  L      +V    + +  L 
Sbjct: 4195 NHTVAVSTDGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDILCGIGIKKVACGTQFSVALT 4254

Query: 392  DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRL 451
              G VY FG      +G P+ G +    RP+ +  L    +  I+ G  HT+ ++  G +
Sbjct: 4255 KDGHVYTFGQDRL--IGLPE-GRARNHNRPQQVPVLSGVFIEDIAVGAEHTLALSSTGDV 4311

Query: 452  FGFGDNERAQLGHDTLRGCLEPTEIFI 478
            + +G N   QLG        EPT I +
Sbjct: 4312 YAWGSNSEGQLGLGHTNHVREPTLITV 4338



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 92/267 (34%), Positives = 130/267 (48%), Gaps = 16/267 (5%)

Query: 122 HTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ-VSASENHAAFVL 179
           HTL   +   VFS G    G LGHG  +TQ      I  P    VV  VSA   H+A V 
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYP-KLIQGPLQGKVVVCVSAGYRHSAAVT 527

Query: 180 QSGQVFTCGDNSSFCCGHRDTN-RPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH-V 237
           + G+++T G+      GH D+N R I  P LV+ +  V   +V+ G + T  L+  G  V
Sbjct: 528 EDGELYTWGEGDFGRLGHGDSNSRNI--PTLVKDISNV--GEVSCGSSHTIALSKDGRTV 583

Query: 238 HTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 297
            + G   +G+LGHGDT     PK I  L+ +  + ++ AG    LA+T  G VY++G G+
Sbjct: 584 WSFGGGDNGKLGHGDTNRVYKPKVIEALQGM-FIRKVCAGSQSSLALTSTGQVYAWGCGA 642

Query: 298 NFCLGHG-EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 356
             CLG G  +   L+P+ I+        +V +S GD H +AL     VY WG    G  G
Sbjct: 643 --CLGCGSSEATALRPKLIEEL--AATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCG 698

Query: 357 HGDEIDK-TLPEPLSSLKSHLAVQVCA 382
            G+     T P+ +S L      Q+ A
Sbjct: 699 QGNSTGPITKPKKVSGLDGVSIQQISA 725



 Score = 86.3 bits (212), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 70/230 (30%), Positives = 107/230 (46%), Gaps = 11/230 (4%)

Query: 237  VHTCGSNTHGQLGH-GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 295
            V+  G+  HGQL   G  +  P     AP        Q+  G +    +  NG V + G 
Sbjct: 3998 VYLWGAGRHGQLAEAGRNVMVPV---AAP--SFSQAQQVVCGQNCTFVIQANGTVLACGE 4052

Query: 296  GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG-DEHVVALDSSGYVYTWGKGYCGA 354
            GS   LG G   D      I   +   +  +  S G D H +AL  SG V++WG G  G 
Sbjct: 4053 GSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGK 4112

Query: 355  LGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGV 414
            LGHG+   +  P  + +L+    VQ+    + + V+   G ++ FG   +G LG  +   
Sbjct: 4113 LGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTADGKLFTFGNGDYGRLGLGN--T 4170

Query: 415  SDKVLRPRILDSLRAHHVSQISTGLYHTVVV-TDRGRLFGFGDNERAQLG 463
            S+K L P  + +L  + + Q++ GL HTV V TD   ++ FGD +  +LG
Sbjct: 4171 SNKKL-PERVTALEGYQIGQVACGLNHTVAVSTDGSMVWAFGDGDYGKLG 4219



 Score = 59.7 bits (143), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 49/180 (27%), Positives = 82/180 (45%), Gaps = 13/180 (7%)

Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 349
           VY +GS S+  L  G Q   LQP+   +F         + AG      + + G V   GK
Sbjct: 374 VYVWGSNSSHQLVEGTQEKILQPKLAPSFS----DAQTIEAGQYCTFVISTDGSVRACGK 429

Query: 350 GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKR----KTFVLVDTGSVYGFGWMGFG 405
           G  G LG GD  +++  + L + + H +++  +  +     T      G V+ +G   +G
Sbjct: 430 GSYGRLGLGDSNNQSTLKKL-TFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYG 488

Query: 406 SLGFPDRGVSDKVLRPRILD-SLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 464
            LG    G S     P+++   L+   V  +S G  H+  VT+ G L+ +G+ +  +LGH
Sbjct: 489 KLG---HGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGH 545



 Score = 50.1 bits (118), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 41/143 (28%), Positives = 68/143 (47%), Gaps = 9/143 (6%)

Query: 344  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 403
            VY WG G  G L    E  + +  P+++     A QV   +  TFV+   G+V   G   
Sbjct: 3998 VYLWGAGRHGQLA---EAGRNVMVPVAAPSFSQAQQVVCGQNCTFVIQANGTVLACGEGS 4054

Query: 404  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLY---HTVVVTDRGRLFGFGDNERA 460
            +G LG   +G SD +    ++ +L+   V+Q+ T      H++ +T+ G +F +GD +  
Sbjct: 4055 YGRLG---QGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYG 4111

Query: 461  QLGHDTLRGCLEPTEIFIQEMEE 483
            +LGH        P +I   + EE
Sbjct: 4112 KLGHGNSDRQRRPRQIEALQGEE 4134



 Score = 49.3 bits (116), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 29/100 (29%), Positives = 48/100 (48%), Gaps = 2/100 (2%)

Query: 125 LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQV 184
           L S   V++ G   C  LG G      +    I   +A  +V +S  ++H   +    +V
Sbjct: 629 LTSTGQVYAWGCGAC--LGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEV 686

Query: 185 FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           +  G+NS   CG  ++  PI +P+ V  L GV  +Q++AG
Sbjct: 687 YAWGNNSMGQCGQGNSTGPITKPKKVSGLDGVSIQQISAG 726


>gi|325186854|emb|CCA21400.1| HECT E3 ubiquitin ligase putative [Albugo laibachii Nc14]
          Length = 4666

 Score =  125 bits (313), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 105/360 (29%), Positives = 166/360 (46%), Gaps = 33/360 (9%)

Query: 129 SSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCG 188
           + V+SCG +  G LGHG +T    SFTR+       V +++A   H+  + + G+V TCG
Sbjct: 580 AEVWSCGQNSYGELGHG-DTVARNSFTRVESLLQRSVKEIAAGNEHSVVLTEEGEVLTCG 638

Query: 189 DNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG-----FLTIRGHVHTCGSN 243
            N +  CGH  T R  +  ++ E    +   Q+++  +F G      L+  G V TCG N
Sbjct: 639 YNDNGQCGHNSTKRASYFKKVSE----LSSAQISSIYSFNGCEHSLLLSNDGRVATCGFN 694

Query: 244 THGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN------GVVYSFGSGS 297
            +GQLG G+T     P  I    +   V  I+    + +    +       ++++ G   
Sbjct: 695 DYGQLGQGNTNGLLVPNFINSFGK-RQVRNISCSYYHTIFACSDFGTLLPTLLFTCGRND 753

Query: 298 NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS------GYVYTWGKGY 351
              LG G+  +   P  +  F    I V  +  G  H + + ++      G +  +GK  
Sbjct: 754 FGQLGTGDIENRNIPTLVVKFPASAI-VQSLGCGQYHSIVIFTTRAKGDQGQICAFGKND 812

Query: 352 CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRK-----TFVLVDTGSVYGFGWMGFGS 406
           CG LG G    + LP  L S +S+   Q   +  K       VL + G V+GFG   +G 
Sbjct: 813 CGQLGCGKSGFQILPVILPSFRSNTTAQHNPKFIKCGYYHNIVLCEEGHVWGFGRNDYGQ 872

Query: 407 LGFPDRGVSDKV---LRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 463
           LGF +  ++D +    RP+++ SL    VS I+ G YHT+   + G L+ FG N   QLG
Sbjct: 873 LGF-ETNLNDGIPHSSRPQLIKSLEGKDVSTIACGSYHTIAACENGLLYVFGRNNHGQLG 931



 Score = 92.0 bits (227), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 88/308 (28%), Positives = 135/308 (43%), Gaps = 29/308 (9%)

Query: 180 QSGQVFTCGDNSSFCCGHRDT-NRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVH 238
           +  +V++CG NS    GH DT  R  F    VE+L     K++ AG   +  LT  G V 
Sbjct: 578 EKAEVWSCGQNSYGELGHGDTVARNSFTR--VESLLQRSVKEIAAGNEHSVVLTEEGEVL 635

Query: 239 TCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 296
           TCG N +GQ GH  T      K ++ L   ++ S+     G  + L ++ +G V + G  
Sbjct: 636 TCGYNDNGQCGHNSTKRASYFKKVSELSSAQISSIYSFN-GCEHSLLLSNDGRVATCGFN 694

Query: 297 SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS------GYVYTWGKG 350
               LG G  +  L P  I +F ++   V  +S    H +   S         ++T G+ 
Sbjct: 695 DYGQLGQGNTNGLLVPNFINSFGKR--QVRNISCSYYHTIFACSDFGTLLPTLLFTCGRN 752

Query: 351 YCGALGHGDEIDKTLPEPLSSLKSHLAVQV--CARKRKTFVLV-----DTGSVYGFGWMG 403
             G LG GD  ++ +P  +    +   VQ   C +     +       D G +  FG   
Sbjct: 753 DFGQLGTGDIENRNIPTLVVKFPASAIVQSLGCGQYHSIVIFTTRAKGDQGQICAFGKND 812

Query: 404 FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQ-----ISTGLYHTVVVTDRGRLFGFGDNE 458
            G LG    G     + P IL S R++  +Q     I  G YH +V+ + G ++GFG N+
Sbjct: 813 CGQLGCGKSGFQ---ILPVILPSFRSNTTAQHNPKFIKCGYYHNIVLCEEGHVWGFGRND 869

Query: 459 RAQLGHDT 466
             QLG +T
Sbjct: 870 YGQLGFET 877



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 81/306 (26%), Positives = 123/306 (40%), Gaps = 33/306 (10%)

Query: 122 HTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAF--- 177
           H+LL+SN   V +CG +  G LG G  T   +    IN      V  +S S  H  F   
Sbjct: 678 HSLLLSNDGRVATCGFNDYGQLGQG-NTNGLLVPNFINSFGKRQVRNISCSYYHTIFACS 736

Query: 178 ---VLQSGQVFTCGDNSSFCCGHRDT-NRPIFRPRLV------EALKGVPCKQVTAGLNF 227
               L    +FTCG N     G  D  NR I  P LV        ++ + C Q  + + F
Sbjct: 737 DFGTLLPTLLFTCGRNDFGQLGTGDIENRNI--PTLVVKFPASAIVQSLGCGQYHSIVIF 794

Query: 228 TGFLT-IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ-----IAAGPSYM 281
           T      +G +   G N  GQLG G +  +  P  I P     +  Q     I  G  + 
Sbjct: 795 TTRAKGDQGQICAFGKNDCGQLGCGKSGFQILP-VILPSFRSNTTAQHNPKFIKCGYYHN 853

Query: 282 LAVTGNGVVYSFGS------GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHV 335
           + +   G V+ FG       G    L  G  H   +P+ I++   +G  V  ++ G  H 
Sbjct: 854 IVLCEEGHVWGFGRNDYGQLGFETNLNDGIPHSS-RPQLIKSL--EGKDVSTIACGSYHT 910

Query: 336 VALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGS 395
           +A   +G +Y +G+   G LG  D  D   P P+ +  +    ++ A    T +L+    
Sbjct: 911 IAACENGLLYVFGRNNHGQLGTADNNDLATPFPVIAFINRHISRLSAGFYHTIILIGGAE 970

Query: 396 VYGFGW 401
           +   G+
Sbjct: 971 IKEIGY 976



 Score = 44.3 bits (103), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 35/140 (25%), Positives = 61/140 (43%), Gaps = 5/140 (3%)

Query: 339 DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYG 398
           D    V++ G+   G LGHGD + +     + SL      ++ A    + VL + G V  
Sbjct: 577 DEKAEVWSCGQNSYGELGHGDTVARNSFTRVESLLQRSVKEIAAGNEHSVVLTEEGEVLT 636

Query: 399 FGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIST--GLYHTVVVTDRGRLFGFGD 456
            G+   G  G      + +    + +  L +  +S I +  G  H++++++ GR+   G 
Sbjct: 637 CGYNDNGQCG---HNSTKRASYFKKVSELSSAQISSIYSFNGCEHSLLLSNDGRVATCGF 693

Query: 457 NERAQLGHDTLRGCLEPTEI 476
           N+  QLG     G L P  I
Sbjct: 694 NDYGQLGQGNTNGLLVPNFI 713



 Score = 39.7 bits (91), Expect = 3.9,   Method: Compositional matrix adjust.
 Identities = 41/156 (26%), Positives = 63/156 (40%), Gaps = 15/156 (9%)

Query: 119 GRYHTLLI-------SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPS---AAHVVQ- 167
           G+YH+++I           + + G + CG LG G    Q +     +F S   A H  + 
Sbjct: 786 GQYHSIVIFTTRAKGDQGQICAFGKNDCGQLGCGKSGFQILPVILPSFRSNTTAQHNPKF 845

Query: 168 VSASENHAAFVLQSGQVFTCGDNS----SFCCGHRDTNRPIFRPRLVEALKGVPCKQVTA 223
           +     H   + + G V+  G N      F     D      RP+L+++L+G     +  
Sbjct: 846 IKCGYYHNIVLCEEGHVWGFGRNDYGQLGFETNLNDGIPHSSRPQLIKSLEGKDVSTIAC 905

Query: 224 GLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTP 259
           G   T      G ++  G N HGQLG  D  D  TP
Sbjct: 906 GSYHTIAACENGLLYVFGRNNHGQLGTADNNDLATP 941


>gi|74002225|ref|XP_851549.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 [Canis lupus
           familiaris]
          Length = 1015

 Score =  125 bits (313), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 92/264 (34%), Positives = 130/264 (49%), Gaps = 7/264 (2%)

Query: 203 PIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSI 262
           P+ R R+   L GV  +Q  +G   +  L   G VH+CG N  GQLG          K I
Sbjct: 12  PVSRRRV--GLGGVELRQAASGERHSLLLLSNGQVHSCGDNGRGQLGQRGAPCSAQLKRI 69

Query: 263 APLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGE-QHDELQPRAIQTFRRK 321
             LE +  V  ++ G  + LAV   G V+++G+GS   LG GE +   L P  I+T    
Sbjct: 70  RALETL-HVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGTGEFKETNLIPMKIKTLN-- 126

Query: 322 GIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEI-DKTLPEPLSSLKSHLAVQV 380
            I + +VS G  H +AL   G V++WG    G LG G +   +  P+ + SL      QV
Sbjct: 127 DIKIKQVSCGHYHSLALSEGGQVFSWGSNSDGQLGLGKKFPSQASPQRVRSLDGIPLAQV 186

Query: 381 CARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLY 440
            A    +F L  +G+ +G+G    G L      VS +  +P  + +L+   V  IS G  
Sbjct: 187 AAGGAHSFALSLSGTSFGWGRNNAGQLALHKNNVSGQSYKPYSISALKNLGVIYISCGYE 246

Query: 441 HTVVVTDRGRLFGFGDNERAQLGH 464
           HTVV+T  G++F FGDN   QLGH
Sbjct: 247 HTVVLTQNGKVFTFGDNTYGQLGH 270



 Score = 97.4 bits (241), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 91/320 (28%), Positives = 150/320 (46%), Gaps = 15/320 (4%)

Query: 142 LGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTN 201
           L  GP     VS  R+       + Q ++ E H+  +L +GQV +CGDN     G R   
Sbjct: 3   LSWGPGPRGPVSRRRVGL-GGVELRQAASGERHSLLLLSNGQVHSCGDNGRGQLGQRGAP 61

Query: 202 RPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLD-RPTPK 260
                 R + AL+ +    V+ G   +  +  +G V   G+ + GQLG G+  +    P 
Sbjct: 62  CSAQLKR-IRALETLHVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGTGEFKETNLIPM 120

Query: 261 SIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH-DELQPRAIQTFR 319
            I  L ++  + Q++ G  + LA++  G V+S+GS S+  LG G++   +  P+ +++  
Sbjct: 121 KIKTLNDI-KIKQVSCGHYHSLALSEGGQVFSWGSNSDGQLGLGKKFPSQASPQRVRSL- 178

Query: 320 RKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG-HGDEI--DKTLPEPLSSLKSHL 376
             GI + +V+AG  H  AL  SG  + WG+   G L  H + +      P  +S+LK+  
Sbjct: 179 -DGIPLAQVAAGGAHSFALSLSGTSFGWGRNNAGQLALHKNNVSGQSYKPYSISALKNLG 237

Query: 377 AVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS 436
            + +      T VL   G V+ FG   +G LG            P++++ +    VSQI 
Sbjct: 238 VIYISCGYEHTVVLTQNGKVFTFGDNTYGQLGHSPTAEKSG---PQLVEGIDGL-VSQID 293

Query: 437 TGLYHTVV-VTDRGRLFGFG 455
            G YHT+  V   G++  FG
Sbjct: 294 CGSYHTLAYVYTTGKVVSFG 313



 Score = 95.5 bits (236), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 88/296 (29%), Positives = 134/296 (45%), Gaps = 19/296 (6%)

Query: 115 QITTGRYHTLLI-SNSSVFSCGSSLCGVLGH--GPETTQCVSFTRINFPSAAHVVQVSAS 171
           Q  +G  H+LL+ SN  V SCG +  G LG    P + Q     RI      HV  VS  
Sbjct: 27  QAASGERHSLLLLSNGQVHSCGDNGRGQLGQRGAPCSAQ---LKRIRALETLHVDLVSCG 83

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
           + H+  V   G+VF  G  S    G  +       P  ++ L  +  KQV+ G   +  L
Sbjct: 84  KEHSLAVCHKGRVFAWGAGSEGQLGTGEFKETNLIPMKIKTLNDIKIKQVSCGHYHSLAL 143

Query: 232 TIRGHVHTCGSNTHGQLGHGDTL-DRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 290
           +  G V + GSN+ GQLG G     + +P+ +  L+ +  + Q+AAG ++  A++ +G  
Sbjct: 144 SEGGQVFSWGSNSDGQLGLGKKFPSQASPQRVRSLDGI-PLAQVAAGGAHSFALSLSGT- 201

Query: 291 YSFGSGSNFCLGHGEQHDE------LQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
            SFG G N   G    H         +P +I   +  G  V+ +S G EH V L  +G V
Sbjct: 202 -SFGWGRNNA-GQLALHKNNVSGQSYKPYSISALKNLG--VIYISCGYEHTVVLTQNGKV 257

Query: 345 YTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 400
           +T+G    G LGH    +K+ P+ +  +   ++   C        +  TG V  FG
Sbjct: 258 FTFGDNTYGQLGHSPTAEKSGPQLVEGIDGLVSQIDCGSYHTLAYVYTTGKVVSFG 313


>gi|270001313|gb|EEZ97760.1| hect domain and RLD 2-like protein [Tribolium castaneum]
          Length = 816

 Score =  125 bits (313), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 96/345 (27%), Positives = 160/345 (46%), Gaps = 39/345 (11%)

Query: 141 VLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDT 200
           + G GP+    +S   I         Q+  S+     + Q+G+VF    +S   C     
Sbjct: 457 IFGVGPQNCDTLSELTIK--------QICCSDRTILILTQTGKVFFMYYSSDTQC----- 503

Query: 201 NRPIFRPRLVEALKGVPCKQVTA---GLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRP 257
                 P+ + AL      ++ A   G ++   LT    V++ G+   G+LGHGDT  + 
Sbjct: 504 ------PQEMTALDDKEVIKIAAHPEGKHYLA-LTKDYEVYSWGNGDGGRLGHGDTSTKE 556

Query: 258 TPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQT 317
            P  I  L+    ++ +  G +Y  A++ NG +Y++G G+   LGHG   D L P  I  
Sbjct: 557 EPTLIQALKG-KDIIDVECGGTYSAAISANGALYTWGRGNYGRLGHGTAEDCLTPTMISA 615

Query: 318 FRRKGIHVVRVSAGD--EHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSH 375
              +  H+++V+ G    H + + S G VY+WG G  G LG G      LP  +  L++ 
Sbjct: 616 LSDE--HIIKVACGSFYAHTLCITSQGKVYSWGDGDYGKLGRGGSDGSKLPRLIEKLQNV 673

Query: 376 LAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQI 435
             VQV    + +  L + G VY +G      LG P     + V  P +++ LR   V  +
Sbjct: 674 KIVQVYCGAQFSVALSEDGHVYTWGKGEGWKLGHP---TEENVRFPEMVEVLRDRKVVGV 730

Query: 436 STGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQE 480
           S G+ H + +TD+G ++G+G NE  Q+         + +E+F+Q+
Sbjct: 731 SLGVSHVLALTDQGEVYGWGKNENKQI--------CDSSELFVQQ 767



 Score =  103 bits (256), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 77/276 (27%), Positives = 128/276 (46%), Gaps = 7/276 (2%)

Query: 119 GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
           G+++  L  +  V+S G+   G LGHG  +T+    T I       ++ V     ++A +
Sbjct: 524 GKHYLALTKDYEVYSWGNGDGGRLGHGDTSTK-EEPTLIQALKGKDIIDVECGGTYSAAI 582

Query: 179 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI--RGH 236
             +G ++T G  +    GH  T      P ++ AL      +V  G  +   L I  +G 
Sbjct: 583 SANGALYTWGRGNYGRLGH-GTAEDCLTPTMISALSDEHIIKVACGSFYAHTLCITSQGK 641

Query: 237 VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 296
           V++ G   +G+LG G +     P+ I  L+ V  +VQ+  G  + +A++ +G VY++G G
Sbjct: 642 VYSWGDGDYGKLGRGGSDGSKLPRLIEKLQNV-KIVQVYCGAQFSVALSEDGHVYTWGKG 700

Query: 297 SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 356
             + LGH  + +   P  ++  R +   VV VS G  HV+AL   G VY WGK     + 
Sbjct: 701 EGWKLGHPTEENVRFPEMVEVLRDR--KVVGVSLGVSHVLALTDQGEVYGWGKNENKQIC 758

Query: 357 HGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVD 392
              E+    P  + +LK    V VC    ++F   D
Sbjct: 759 DSSELFVQQPRLIEALKGQKVVGVCCGPAQSFAWTD 794


>gi|219847608|ref|YP_002462041.1| chromosome condensation regulator RCC1 [Chloroflexus aggregans DSM
           9485]
 gi|219541867|gb|ACL23605.1| regulator of chromosome condensation RCC1 [Chloroflexus aggregans
           DSM 9485]
          Length = 778

 Score =  124 bits (312), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 111/355 (31%), Positives = 161/355 (45%), Gaps = 21/355 (5%)

Query: 116 ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           I  G YHT  L+S+  V+  G +  G LG G  T +         PS   V  ++A   H
Sbjct: 365 IAAGDYHTCALMSSGGVWCWGRNNSGQLGDGTTTARSTPAAVSGLPSG--VTAIAAGGLH 422

Query: 175 AAFVLQSGQVFTCGDNSSFCCGH---RDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
              ++ SG V+  G N+S   G     D++ P+    L   ++      + AG   T  L
Sbjct: 423 TCALMSSGGVWCWGLNNSGQLGDGSDTDSSTPVAVSGLASGVE-----TIAAGGWHTCAL 477

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
           T  G V   G N  GQLG G T+   TP +++ L     V  IAAG  +  A+TG+G V+
Sbjct: 478 TSSGGVWCWGRNNSGQLGDGSTIYHITPVAVSGLPS--GVTAIAAGDYHTCALTGSGGVW 535

Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 351
            +G   +  LG G   D   P A+         V  ++AG  H  AL SSG V+ WG  +
Sbjct: 536 CWGYNLSGQLGDGTTTDRSTPVAVSGLTSG---VTVIAAGRFHTCALTSSGGVWCWGANF 592

Query: 352 CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 411
            G LG G   ++T P  +S L S +   + A    T  L  +G V+ +G   +G LG   
Sbjct: 593 DGQLGDGTTTNRTTPVAVSGLPSGV-TAIAAGGWHTCALTSSGEVWCWGDNYYGQLG--- 648

Query: 412 RGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDT 466
            G +     P  +  L +  V+ I+ G  HT  +T  G ++ +GDN   QLG  T
Sbjct: 649 DGTTTNRSTPGAVSGLPSG-VTAIAAGWEHTCALTSSGEVWCWGDNYYGQLGDGT 702



 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 111/356 (31%), Positives = 162/356 (45%), Gaps = 19/356 (5%)

Query: 111 AGNMQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS 169
           +G   I  G  HT  L+S+  V+  G +  G LG G +T             A+ V  ++
Sbjct: 411 SGVTAIAAGGLHTCALMSSGGVWCWGLNNSGQLGDGSDTDSSTPVAVSGL--ASGVETIA 468

Query: 170 ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVP--CKQVTAGLNF 227
           A   H   +  SG V+  G N+S   G       I+    V A+ G+P     + AG   
Sbjct: 469 AGGWHTCALTSSGGVWCWGRNNS---GQLGDGSTIYHITPV-AVSGLPSGVTAIAAGDYH 524

Query: 228 TGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN 287
           T  LT  G V   G N  GQLG G T DR TP +++ L     V  IAAG  +  A+T +
Sbjct: 525 TCALTGSGGVWCWGYNLSGQLGDGTTTDRSTPVAVSGLTS--GVTVIAAGRFHTCALTSS 582

Query: 288 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 347
           G V+ +G+  +  LG G   +   P A+         V  ++AG  H  AL SSG V+ W
Sbjct: 583 GGVWCWGANFDGQLGDGTTTNRTTPVAVSGLPSG---VTAIAAGGWHTCALTSSGEVWCW 639

Query: 348 GKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSL 407
           G  Y G LG G   +++ P  +S L S +   + A    T  L  +G V+ +G   +G L
Sbjct: 640 GDNYYGQLGDGTTTNRSTPGAVSGLPSGV-TAIAAGWEHTCALTSSGEVWCWGDNYYGQL 698

Query: 408 GFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 463
           G    G +     P  +  L +  V+ I+ G+YHT  +T  G +  +G+N   QLG
Sbjct: 699 G---DGTTTNRSTPGAVSGLPSG-VTAIAAGVYHTCALTGSGGVMCWGNNGDGQLG 750



 Score =  119 bits (298), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 112/358 (31%), Positives = 160/358 (44%), Gaps = 17/358 (4%)

Query: 111 AGNMQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS 169
           +G   I  G YHT  ++ S  V+  G +  G LG G  T +         PS   V  ++
Sbjct: 309 SGVTAIAAGDYHTCALTGSGEVWCWGGNGFGQLGDGTTTARSTPAAVSGLPSG--VETIA 366

Query: 170 ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEAL-KGVPCKQVTAGLNFT 228
           A + H   ++ SG V+  G N+S   G   T      P  V  L  GV    + AG   T
Sbjct: 367 AGDYHTCALMSSGGVWCWGRNNSGQLGD-GTTTARSTPAAVSGLPSGV--TAIAAGGLHT 423

Query: 229 GFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG 288
             L   G V   G N  GQLG G   D  TP +++ L     V  IAAG  +  A+T +G
Sbjct: 424 CALMSSGGVWCWGLNNSGQLGDGSDTDSSTPVAVSGLAS--GVETIAAGGWHTCALTSSG 481

Query: 289 VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 348
            V+ +G  ++  LG G     + P A+         V  ++AGD H  AL  SG V+ WG
Sbjct: 482 GVWCWGRNNSGQLGDGSTIYHITPVAVSGLPSG---VTAIAAGDYHTCALTGSGGVWCWG 538

Query: 349 KGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLG 408
               G LG G   D++ P  +S L S + V + A +  T  L  +G V+ +G    G LG
Sbjct: 539 YNLSGQLGDGTTTDRSTPVAVSGLTSGVTV-IAAGRFHTCALTSSGGVWCWGANFDGQLG 597

Query: 409 FPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDT 466
               G +     P  +  L +  V+ I+ G +HT  +T  G ++ +GDN   QLG  T
Sbjct: 598 ---DGTTTNRTTPVAVSGLPS-GVTAIAAGGWHTCALTSSGEVWCWGDNYYGQLGDGT 651



 Score =  115 bits (288), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 113/369 (30%), Positives = 158/369 (42%), Gaps = 20/369 (5%)

Query: 112 GNMQITTGRYHTLLISNSSVFSC-GSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSA 170
           G   I  G  HT  ++ S    C G +  G LG G  TT+         PS   V  ++A
Sbjct: 54  GVTAIAAGGAHTCALTGSGGVMCWGGNDFGQLGDGTPTTRSTPGAVSGLPSG--VTAIAA 111

Query: 171 SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVP--CKQVTAGLNFT 228
              H   +  SG V   G N S   G    N   F      A+ G+P     + AG + T
Sbjct: 112 GNYHTCALTGSGGVRCWGANYSGQLG----NGLTFGRSTPGAVSGLPSGVTAIAAGGDHT 167

Query: 229 GFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG 288
             L   G V   G N +GQLG G T +R TP +++ L     V  IAAG  +  A+TG+G
Sbjct: 168 CALMSSGGVMCWGDNYYGQLGDGTTTNRRTPVAVSGLPS--GVTAIAAGGLHTCALTGSG 225

Query: 289 VVYSFGSGSNFCLGHGEQ-HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 347
            V+ +G      LG G   +    P A+         +  ++AG  H  AL SSG V+ W
Sbjct: 226 EVWCWGYNYYGQLGDGTTTYSRSTPAAVGGLPSG---MTAIAAGGLHTCALMSSGGVWCW 282

Query: 348 GKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSL 407
           G+   G LG G + D + P  +S L S +   + A    T  L  +G V+ +G  GFG L
Sbjct: 283 GRNDSGQLGDGSDTDSSTPVAVSGLPSGV-TAIAAGDYHTCALTGSGEVWCWGGNGFGQL 341

Query: 408 GFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTL 467
           G    G +     P  +  L +  V  I+ G YHT  +   G ++ +G N   QLG  T 
Sbjct: 342 G---DGTTTARSTPAAVSGLPS-GVETIAAGDYHTCALMSSGGVWCWGRNNSGQLGDGTT 397

Query: 468 RGCLEPTEI 476
                P  +
Sbjct: 398 TARSTPAAV 406



 Score =  112 bits (280), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 112/368 (30%), Positives = 160/368 (43%), Gaps = 17/368 (4%)

Query: 111 AGNMQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS 169
           +G   I  G  HT  L+S+  V+  G +  G LG G +T           PS   V  ++
Sbjct: 258 SGMTAIAAGGLHTCALMSSGGVWCWGRNDSGQLGDGSDTDSSTPVAVSGLPSG--VTAIA 315

Query: 170 ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEAL-KGVPCKQVTAGLNFT 228
           A + H   +  SG+V+  G N  F      T      P  V  L  GV  + + AG   T
Sbjct: 316 AGDYHTCALTGSGEVWCWGGNG-FGQLGDGTTTARSTPAAVSGLPSGV--ETIAAGDYHT 372

Query: 229 GFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG 288
             L   G V   G N  GQLG G T  R TP +++ L     V  IAAG  +  A+  +G
Sbjct: 373 CALMSSGGVWCWGRNNSGQLGDGTTTARSTPAAVSGLPS--GVTAIAAGGLHTCALMSSG 430

Query: 289 VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 348
            V+ +G  ++  LG G   D   P A+         V  ++AG  H  AL SSG V+ WG
Sbjct: 431 GVWCWGLNNSGQLGDGSDTDSSTPVAVSGLASG---VETIAAGGWHTCALTSSGGVWCWG 487

Query: 349 KGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLG 408
           +   G LG G  I    P  +S L S +   + A    T  L  +G V+ +G+   G LG
Sbjct: 488 RNNSGQLGDGSTIYHITPVAVSGLPSGV-TAIAAGDYHTCALTGSGGVWCWGYNLSGQLG 546

Query: 409 FPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLR 468
             D   +D+   P  +  L +  V+ I+ G +HT  +T  G ++ +G N   QLG  T  
Sbjct: 547 --DGTTTDRS-TPVAVSGLTSG-VTVIAAGRFHTCALTSSGGVWCWGANFDGQLGDGTTT 602

Query: 469 GCLEPTEI 476
               P  +
Sbjct: 603 NRTTPVAV 610



 Score =  109 bits (272), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 108/358 (30%), Positives = 155/358 (43%), Gaps = 22/358 (6%)

Query: 111 AGNMQITTGRYHTLLISNSSVFSC-GSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS 169
           +G   I  G YHT  ++ S    C G++  G LG+G    +         PS   V  ++
Sbjct: 104 SGVTAIAAGNYHTCALTGSGGVRCWGANYSGQLGNGLTFGRSTPGAVSGLPSG--VTAIA 161

Query: 170 ASENHAAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVP--CKQVTAGLN 226
           A  +H   ++ SG V   GDN     G    TNR     R   A+ G+P     + AG  
Sbjct: 162 AGGDHTCALMSSGGVMCWGDNYYGQLGDGTTTNR-----RTPVAVSGLPSGVTAIAAGGL 216

Query: 227 FTGFLTIRGHVHTCGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 285
            T  LT  G V   G N +GQLG G  T  R TP ++  L     +  IAAG  +  A+ 
Sbjct: 217 HTCALTGSGEVWCWGYNYYGQLGDGTTTYSRSTPAAVGGLPS--GMTAIAAGGLHTCALM 274

Query: 286 GNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVY 345
            +G V+ +G   +  LG G   D   P A+         V  ++AGD H  AL  SG V+
Sbjct: 275 SSGGVWCWGRNDSGQLGDGSDTDSSTPVAVSGLPSG---VTAIAAGDYHTCALTGSGEVW 331

Query: 346 TWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFG 405
            WG    G LG G    ++ P  +S L S +   + A    T  L+ +G V+ +G    G
Sbjct: 332 CWGGNGFGQLGDGTTTARSTPAAVSGLPSGVET-IAAGDYHTCALMSSGGVWCWGRNNSG 390

Query: 406 SLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 463
            LG    G +     P  +  L +  V+ I+ G  HT  +   G ++ +G N   QLG
Sbjct: 391 QLG---DGTTTARSTPAAVSGLPS-GVTAIAAGGLHTCALMSSGGVWCWGLNNSGQLG 444



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 94/303 (31%), Positives = 132/303 (43%), Gaps = 17/303 (5%)

Query: 110 SAGNMQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQV 168
           ++G   I  G +HT  L S+  V+  G +  G LG G              PS   V  +
Sbjct: 461 ASGVETIAAGGWHTCALTSSGGVWCWGRNNSGQLGDGSTIYHITPVAVSGLPSG--VTAI 518

Query: 169 SASENHAAFVLQSGQVFTCGDNSSFCCGH---RDTNRPIFRPRLVEALKGVPCKQVTAGL 225
           +A + H   +  SG V+  G N S   G     D + P+    L   +       + AG 
Sbjct: 519 AAGDYHTCALTGSGGVWCWGYNLSGQLGDGTTTDRSTPVAVSGLTSGVT-----VIAAGR 573

Query: 226 NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 285
             T  LT  G V   G+N  GQLG G T +R TP +++ L     V  IAAG  +  A+T
Sbjct: 574 FHTCALTSSGGVWCWGANFDGQLGDGTTTNRTTPVAVSGLPS--GVTAIAAGGWHTCALT 631

Query: 286 GNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVY 345
            +G V+ +G      LG G   +   P A+         V  ++AG EH  AL SSG V+
Sbjct: 632 SSGEVWCWGDNYYGQLGDGTTTNRSTPGAVSGLPSG---VTAIAAGWEHTCALTSSGEVW 688

Query: 346 TWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFG 405
            WG  Y G LG G   +++ P  +S L S +   + A    T  L  +G V  +G  G G
Sbjct: 689 CWGDNYYGQLGDGTTTNRSTPGAVSGLPSGV-TAIAAGVYHTCALTGSGGVMCWGNNGDG 747

Query: 406 SLG 408
            LG
Sbjct: 748 QLG 750



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 80/251 (31%), Positives = 117/251 (46%), Gaps = 11/251 (4%)

Query: 213 LKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV 272
           L+GV    + AG   T  LT  G V   G N  GQLG G    R TP +++ L     V 
Sbjct: 52  LQGV--TAIAAGGAHTCALTGSGGVMCWGGNDFGQLGDGTPTTRSTPGAVSGLPS--GVT 107

Query: 273 QIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGD 332
            IAAG  +  A+TG+G V  +G+  +  LG+G       P A+         V  ++AG 
Sbjct: 108 AIAAGNYHTCALTGSGGVRCWGANYSGQLGNGLTFGRSTPGAVSGLPSG---VTAIAAGG 164

Query: 333 EHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVD 392
           +H  AL SSG V  WG  Y G LG G   ++  P  +S L S +   + A    T  L  
Sbjct: 165 DHTCALMSSGGVMCWGDNYYGQLGDGTTTNRRTPVAVSGLPSGV-TAIAAGGLHTCALTG 223

Query: 393 TGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLF 452
           +G V+ +G+  +G LG  D   +     P  +  L +  ++ I+ G  HT  +   G ++
Sbjct: 224 SGEVWCWGYNYYGQLG--DGTTTYSRSTPAAVGGLPS-GMTAIAAGGLHTCALMSSGGVW 280

Query: 453 GFGDNERAQLG 463
            +G N+  QLG
Sbjct: 281 CWGRNDSGQLG 291



 Score = 82.0 bits (201), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 84/259 (32%), Positives = 111/259 (42%), Gaps = 14/259 (5%)

Query: 111 AGNMQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS 169
           +G   I  G YHT  ++ S  V+  G +L G LG G  T +          S   V  ++
Sbjct: 513 SGVTAIAAGDYHTCALTGSGGVWCWGYNLSGQLGDGTTTDRSTPVAVSGLTSG--VTVIA 570

Query: 170 ASENHAAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEAL-KGVPCKQVTAGLNF 227
           A   H   +  SG V+  G N     G    TNR    P  V  L  GV    + AG   
Sbjct: 571 AGRFHTCALTSSGGVWCWGANFDGQLGDGTTTNR--TTPVAVSGLPSGV--TAIAAGGWH 626

Query: 228 TGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN 287
           T  LT  G V   G N +GQLG G T +R TP +++ L     V  IAAG  +  A+T +
Sbjct: 627 TCALTSSGEVWCWGDNYYGQLGDGTTTNRSTPGAVSGLPS--GVTAIAAGWEHTCALTSS 684

Query: 288 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 347
           G V+ +G      LG G   +   P A+         V  ++AG  H  AL  SG V  W
Sbjct: 685 GEVWCWGDNYYGQLGDGTTTNRSTPGAVSGLPSG---VTAIAAGVYHTCALTGSGGVMCW 741

Query: 348 GKGYCGALGHGDEIDKTLP 366
           G    G LG G  + +T P
Sbjct: 742 GNNGDGQLGDGRPLYRTTP 760



 Score = 77.4 bits (189), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 71/222 (31%), Positives = 101/222 (45%), Gaps = 11/222 (4%)

Query: 110 SAGNMQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQV 168
           ++G   I  GR+HT  L S+  V+  G++  G LG G  T +         PS   V  +
Sbjct: 563 TSGVTVIAAGRFHTCALTSSGGVWCWGANFDGQLGDGTTTNRTTPVAVSGLPSG--VTAI 620

Query: 169 SASENHAAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEAL-KGVPCKQVTAGLN 226
           +A   H   +  SG+V+  GDN     G    TNR    P  V  L  GV    + AG  
Sbjct: 621 AAGGWHTCALTSSGEVWCWGDNYYGQLGDGTTTNRST--PGAVSGLPSGV--TAIAAGWE 676

Query: 227 FTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTG 286
            T  LT  G V   G N +GQLG G T +R TP +++ L     V  IAAG  +  A+TG
Sbjct: 677 HTCALTSSGEVWCWGDNYYGQLGDGTTTNRSTPGAVSGLPS--GVTAIAAGVYHTCALTG 734

Query: 287 NGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRV 328
           +G V  +G+  +  LG G       P  + T    G+++  +
Sbjct: 735 SGGVMCWGNNGDGQLGDGRPLYRTTPVDVVTSASWGVYLPMI 776


>gi|209878252|ref|XP_002140567.1| regulator of chromosome condensation family protein
           [Cryptosporidium muris RN66]
 gi|209556173|gb|EEA06218.1| regulator of chromosome condensation family protein
           [Cryptosporidium muris RN66]
          Length = 477

 Score =  124 bits (312), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 111/343 (32%), Positives = 163/343 (47%), Gaps = 22/343 (6%)

Query: 115 QITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
           ++  G +H+ +I++S  +   G   CG LG G    + +   R+   S  +V+ VS S+ 
Sbjct: 46  EVCCGGHHSAVITHSGELIVWGYGGCGQLGLGD--LKDIVIPRV-MTSIKNVINVSCSDR 102

Query: 174 HAAFVLQSGQVFTCGDNSSFCCG-----HRDTNRPIFRPRLVEALKGVPCKQVTAGLNFT 228
           H+A +L+ G+++T G N S   G         N  I  P+LVE L      +V+ G   T
Sbjct: 103 HSAAILEDGRLYTWGCNKSGKLGIGSLNVNLNNNIICTPQLVEKLLNEKVIKVSCGSFHT 162

Query: 229 GFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG 288
             LT     +T G    G+LGHGDT D  TPK I  L  + SV  I  G  +   +  NG
Sbjct: 163 ACLTDLNKAYTWGLGMQGRLGHGDTNDVYTPKLIESLAGL-SVKNIVCGGHHTAILLNNG 221

Query: 289 VVYSFGSGSNFCLGHGEQHDELQPRAIQ-TFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 347
            VY  G G+   LG G + D   P+ +Q +   K I    VS G +H   + + G VYTW
Sbjct: 222 KVYFCGGGAFGKLGFGSKEDIYIPKLLQGSLTNKSIK--EVSLGYQHSAVITTKGKVYTW 279

Query: 348 GKGYCGALGH---GDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGF 404
           G+G  G LGH   G E D   P+ +  L S +AV +      T V+ + G VY +G    
Sbjct: 280 GQG--GRLGHIYNGPEPDILSPKLVEKLNSIIAVNISCGHSHTVVISNIGDVYAWGVTRN 337

Query: 405 GSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTD 447
              G  D   +D  L P     L+  ++ Q+S G  HT+ ++D
Sbjct: 338 LGHGVIDSKPNDPTLHP----ILQNKNIVQVSCGKTHTIALSD 376



 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 76/268 (28%), Positives = 126/268 (47%), Gaps = 18/268 (6%)

Query: 205 FRPRLVEALKGVP-CKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 263
             P+L+E+L      K+V  G + +  +T  G +   G    GQLG GD  D   P+ + 
Sbjct: 30  IEPKLIESLYSFNRIKEVCCGGHHSAVITHSGELIVWGYGGCGQLGLGDLKDIVIPRVMT 89

Query: 264 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQ------PRAIQT 317
            ++   +V+ ++    +  A+  +G +Y++G   +  LG G  +  L       P+ ++ 
Sbjct: 90  SIK---NVINVSCSDRHSAAILEDGRLYTWGCNKSGKLGIGSLNVNLNNNIICTPQLVEK 146

Query: 318 FRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLA 377
              +   V++VS G  H   L      YTWG G  G LGHGD  D   P+ + SL     
Sbjct: 147 LLNE--KVIKVSCGSFHTACLTDLNKAYTWGLGMQGRLGHGDTNDVYTPKLIESLAGLSV 204

Query: 378 VQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILD-SLRAHHVSQIS 436
             +      T +L++ G VY  G   FG LGF   G  + +  P++L  SL    + ++S
Sbjct: 205 KNIVCGGHHTAILLNNGKVYFCGGGAFGKLGF---GSKEDIYIPKLLQGSLTNKSIKEVS 261

Query: 437 TGLYHTVVVTDRGRLFGFGDNERAQLGH 464
            G  H+ V+T +G+++ +G   R  LGH
Sbjct: 262 LGYQHSAVITTKGKVYTWGQGGR--LGH 287



 Score = 93.2 bits (230), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 89/334 (26%), Positives = 149/334 (44%), Gaps = 15/334 (4%)

Query: 129 SSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCG 188
           S V + GSS  G LG   E +        +  S   + +V    +H+A +  SG++   G
Sbjct: 8   SGVVAWGSSEYGQLGAIYEESNIEPKLIESLYSFNRIKEVCCGGHHSAVITHSGELIVWG 67

Query: 189 DNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQL 248
                  G  D  + I  PR++ ++K V    V+     +  +   G ++T G N  G+L
Sbjct: 68  YGGCGQLGLGDL-KDIVIPRVMTSIKNVI--NVSCSDRHSAAILEDGRLYTWGCNKSGKL 124

Query: 249 GHGDTLDRP------TPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLG 302
           G G            TP+ +  L     V++++ G  +   +T     Y++G G    LG
Sbjct: 125 GIGSLNVNLNNNIICTPQLVEKLLN-EKVIKVSCGSFHTACLTDLNKAYTWGLGMQGRLG 183

Query: 303 HGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEID 362
           HG+ +D   P+ I++    G+ V  +  G  H   L ++G VY  G G  G LG G + D
Sbjct: 184 HGDTNDVYTPKLIESLA--GLSVKNIVCGGHHTAILLNNGKVYFCGGGAFGKLGFGSKED 241

Query: 363 KTLPEPLS-SLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRP 421
             +P+ L  SL +    +V    + + V+   G VY   W   G LG    G    +L P
Sbjct: 242 IYIPKLLQGSLTNKSIKEVSLGYQHSAVITTKGKVYT--WGQGGRLGHIYNGPEPDILSP 299

Query: 422 RILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFG 455
           ++++ L +     IS G  HTVV+++ G ++ +G
Sbjct: 300 KLVEKLNSIIAVNISCGHSHTVVISNIGDVYAWG 333


>gi|326926479|ref|XP_003209427.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Meleagris
            gallopavo]
          Length = 4334

 Score =  124 bits (312), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 100/339 (29%), Positives = 166/339 (48%), Gaps = 17/339 (5%)

Query: 115  QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQV---SA 170
            Q+  G+  T +I +N +V +CG    G LG G      V  T I+      V Q+     
Sbjct: 3504 QVVCGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHV-LTVISALQGFVVTQLVTSCG 3562

Query: 171  SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
            S+ H+  + +SG+VF+ GD      GH +++R   RPR +EAL+G    Q++ G   +  
Sbjct: 3563 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQMSCGFKHSAV 3621

Query: 231  LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSVVQIAAGPSYMLAVTGNG 288
            +T  G + T G+  +G+LG G+T ++  P+ +  LE  ++G   Q+A G ++ +AV+ +G
Sbjct: 3622 VTADGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIG---QVACGLNHTVAVSMDG 3678

Query: 289  -VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 347
             +V++FG G    LG G    +  P+ +      GI + +V+ G +  VAL   G+VYT+
Sbjct: 3679 SMVWAFGDGDYGKLGLGNSTAKSSPQKVDIL--CGIGIKKVACGTQFSVALTKDGHVYTF 3736

Query: 348  GKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSL 407
            G+     L  G   +   P+ +  L       +      T  L  TG VY +G    G L
Sbjct: 3737 GQDRLIGLPEGRARNHNRPQQVPVLSGVFIEDIAVGAEHTLALSSTGDVYAWGSNSEGQL 3796

Query: 408  GFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT 446
            G    G ++ V  P ++  L+  ++ QIS G  H+   T
Sbjct: 3797 GL---GHTNHVREPTLITVLQGKNIRQISAGRCHSAAWT 3832



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 91/315 (28%), Positives = 144/315 (45%), Gaps = 25/315 (7%)

Query: 160 PSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTN------RPIFRPRLVEAL 213
           PS +    + A +     +   G V  CG  S    G  D+N      +  F P    ++
Sbjct: 400 PSFSDAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPH--RSI 457

Query: 214 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
           K V   + + G   T   T  G V + G   +G+LGHG++  +  PK I    +   VV 
Sbjct: 458 KKVSSSKGSDG--HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVC 515

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           ++AG  +  AVT +G +Y++G G    LGHG+ +     R I T  +   +V  VS G  
Sbjct: 516 VSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNS----RNIPTLVKDISNVGEVSCGSS 571

Query: 334 HVVALDSSGY-VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVD 392
           H +AL   G  V+++G G  G LGHGD      P+ + +L+     +VCA  + +  L  
Sbjct: 572 HTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTS 631

Query: 393 TGSVYGFG---WMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRG 449
           TG VY +G    +G GS            LRP++++ L A  +  IS G  H + ++   
Sbjct: 632 TGQVYAWGCGACLGCGS-------SEATALRPKLIEELAATRIVDISIGDSHCLALSHDN 684

Query: 450 RLFGFGDNERAQLGH 464
            ++ +G+N   Q G 
Sbjct: 685 EVYAWGNNSMGQCGQ 699



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 90/324 (27%), Positives = 150/324 (46%), Gaps = 13/324 (4%)

Query: 160  PSAAHVVQVSASENHAAFVLQS-GQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPC 218
            PS +   QV   +N   FV+Q+ G V  CG+ S    G  +++  +    ++ AL+G   
Sbjct: 3497 PSFSQAQQVVCGQN-CTFVIQANGTVLACGEGSYGRLGQGNSDD-LHVLTVISALQGFVV 3554

Query: 219  KQVTAGLNFTGF---LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA 275
             Q+       G    LT  G V + G   +G+LGHG++  +  P+ I  L+    VVQ++
Sbjct: 3555 TQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQG-EEVVQMS 3613

Query: 276  AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHV 335
             G  +   VT +G +++FG+G    LG G   ++  P  +     +G  + +V+ G  H 
Sbjct: 3614 CGFKHSAVVTADGKLFTFGNGDYGRLGLGNTSNKKLPERVTAL--EGYQIGQVACGLNHT 3671

Query: 336  VALDSSG-YVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 394
            VA+   G  V+ +G G  G LG G+   K+ P+ +  L      +V    + +  L   G
Sbjct: 3672 VAVSMDGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDILCGIGIKKVACGTQFSVALTKDG 3731

Query: 395  SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 454
             VY FG      +G P+ G +    RP+ +  L    +  I+ G  HT+ ++  G ++ +
Sbjct: 3732 HVYTFGQDRL--IGLPE-GRARNHNRPQQVPVLSGVFIEDIAVGAEHTLALSSTGDVYAW 3788

Query: 455  GDNERAQLGHDTLRGCLEPTEIFI 478
            G N   QLG        EPT I +
Sbjct: 3789 GSNSEGQLGLGHTNHVREPTLITV 3812



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 92/267 (34%), Positives = 130/267 (48%), Gaps = 16/267 (5%)

Query: 122 HTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ-VSASENHAAFVL 179
           HTL   +   VFS G    G LGHG  +TQ      I  P    VV  VSA   H+A V 
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYP-KLIQGPLQGKVVVCVSAGYRHSAAVT 527

Query: 180 QSGQVFTCGDNSSFCCGHRDTN-RPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH-V 237
           + G+++T G+      GH D+N R I  P LV+ +  V   +V+ G + T  L+  G  V
Sbjct: 528 EDGELYTWGEGDFGRLGHGDSNSRNI--PTLVKDISNV--GEVSCGSSHTIALSKDGRTV 583

Query: 238 HTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 297
            + G   +G+LGHGDT     PK I  L+ +  + ++ AG    LA+T  G VY++G G+
Sbjct: 584 WSFGGGDNGKLGHGDTNRVYKPKVIEALQGM-FIRKVCAGSQSSLALTSTGQVYAWGCGA 642

Query: 298 NFCLGHG-EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 356
             CLG G  +   L+P+ I+        +V +S GD H +AL     VY WG    G  G
Sbjct: 643 --CLGCGSSEATALRPKLIEEL--AATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCG 698

Query: 357 HGDEIDK-TLPEPLSSLKSHLAVQVCA 382
            G+     T P+ +S L      Q+ A
Sbjct: 699 QGNSTGPITKPKKVSGLDGVSIQQISA 725



 Score = 85.5 bits (210), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 72/246 (29%), Positives = 112/246 (45%), Gaps = 13/246 (5%)

Query: 237  VHTCGSNTHGQLGH-GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 295
            V+  G+  HGQL   G  +  P     AP        Q+  G +    +  NG V + G 
Sbjct: 3472 VYLWGAGRHGQLAEAGRNVMVPV---AAP--SFSQAQQVVCGQNCTFVIQANGTVLACGE 3526

Query: 296  GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG-DEHVVALDSSGYVYTWGKGYCGA 354
            GS   LG G   D      I   +   +  +  S G D H +AL  SG V++WG G  G 
Sbjct: 3527 GSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGK 3586

Query: 355  LGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGV 414
            LGHG+   +  P  + +L+    VQ+    + + V+   G ++ FG   +G LG  +   
Sbjct: 3587 LGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTADGKLFTFGNGDYGRLGLGN--T 3644

Query: 415  SDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRL---FGFGDNERAQLGHDTLRGCL 471
            S+K L P  + +L  + + Q++ GL HTV V+  G +   FG GD  +  LG+ T +   
Sbjct: 3645 SNKKL-PERVTALEGYQIGQVACGLNHTVAVSMDGSMVWAFGDGDYGKLGLGNSTAKSSP 3703

Query: 472  EPTEIF 477
            +  +I 
Sbjct: 3704 QKVDIL 3709



 Score = 59.7 bits (143), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 49/180 (27%), Positives = 82/180 (45%), Gaps = 13/180 (7%)

Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 349
           VY +GS S+  L  G Q   LQP+   +F         + AG      + + G V   GK
Sbjct: 374 VYVWGSNSSHQLVEGTQEKILQPKLAPSFS----DAQTIEAGQYCTFVISTDGSVRACGK 429

Query: 350 GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKR----KTFVLVDTGSVYGFGWMGFG 405
           G  G LG GD  +++  + L + + H +++  +  +     T      G V+ +G   +G
Sbjct: 430 GSYGRLGLGDSNNQSTLKKL-TFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYG 488

Query: 406 SLGFPDRGVSDKVLRPRILD-SLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 464
            LG    G S     P+++   L+   V  +S G  H+  VT+ G L+ +G+ +  +LGH
Sbjct: 489 KLG---HGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGH 545



 Score = 50.1 bits (118), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 41/143 (28%), Positives = 68/143 (47%), Gaps = 9/143 (6%)

Query: 344  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 403
            VY WG G  G L    E  + +  P+++     A QV   +  TFV+   G+V   G   
Sbjct: 3472 VYLWGAGRHGQLA---EAGRNVMVPVAAPSFSQAQQVVCGQNCTFVIQANGTVLACGEGS 3528

Query: 404  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLY---HTVVVTDRGRLFGFGDNERA 460
            +G LG   +G SD +    ++ +L+   V+Q+ T      H++ +T+ G +F +GD +  
Sbjct: 3529 YGRLG---QGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYG 3585

Query: 461  QLGHDTLRGCLEPTEIFIQEMEE 483
            +LGH        P +I   + EE
Sbjct: 3586 KLGHGNSDRQRRPRQIEALQGEE 3608



 Score = 49.3 bits (116), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 29/100 (29%), Positives = 48/100 (48%), Gaps = 2/100 (2%)

Query: 125 LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQV 184
           L S   V++ G   C  LG G      +    I   +A  +V +S  ++H   +    +V
Sbjct: 629 LTSTGQVYAWGCGAC--LGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEV 686

Query: 185 FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           +  G+NS   CG  ++  PI +P+ V  L GV  +Q++AG
Sbjct: 687 YAWGNNSMGQCGQGNSTGPITKPKKVSGLDGVSIQQISAG 726


>gi|357131779|ref|XP_003567511.1| PREDICTED: uncharacterized protein LOC100833487 [Brachypodium
           distachyon]
          Length = 913

 Score =  124 bits (312), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 99/327 (30%), Positives = 152/327 (46%), Gaps = 20/327 (6%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V  V     HAA V ++G+VFT G+ S    GH  +      P LVE+L       V  G
Sbjct: 94  VYHVDCGVKHAALVTKNGEVFTWGEESGGRLGH-GSREDYIHPSLVESLAVSNVDFVACG 152

Query: 225 LNFTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 282
              T  +T  G ++T G  TH  G LGHG  L    PK I+   E   V  ++ G  +  
Sbjct: 153 EFHTCAVTTAGELYTWGDGTHNIGLLGHGTDLSHWIPKRISGALEGQQVAYVSCGTWHTA 212

Query: 283 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL---- 338
            +T  G +++FG G+   LGHG +     PR +++    G+  + V+ G  H  A+    
Sbjct: 213 LITSTGQLFTFGDGTFGVLGHGNRESIPCPREVESL--SGLKTIAVACGVWHTAAVVEVI 270

Query: 339 -------DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 391
                   SSG ++TWG G    LGHGD+  +  P  ++SL  +   ++      T  L 
Sbjct: 271 VTQSSSSISSGKLFTWGDGDKHRLGHGDKEPRVKPTCVASLIDYDFHRIACGHSLTVGLT 330

Query: 392 DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRL 451
            +G V+G G   +G LG P    SD  L P +++ +   +V Q++ G YH  V+T +  +
Sbjct: 331 TSGQVWGMGNTVYGQLGNPR---SDGKL-PCLVEDIMGENVVQVACGSYHVAVLTVKSEV 386

Query: 452 FGFGDNERAQLGHDTLRGCLEPTEIFI 478
           F +G     +LGH  +     PT + +
Sbjct: 387 FTWGKGANGRLGHGDIEDRKIPTLVEV 413



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 90/354 (25%), Positives = 148/354 (41%), Gaps = 35/354 (9%)

Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHVVQVSASE 172
           ++  L+  N  VF+ G    G LGHG       P   + ++ + ++F        V+  E
Sbjct: 102 KHAALVTKNGEVFTWGEESGGRLGHGSREDYIHPSLVESLAVSNVDF--------VACGE 153

Query: 173 NHAAFVLQSGQVFTCGDNSSFC--CGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
            H   V  +G+++T GD +      GH          R+  AL+G     V+ G   T  
Sbjct: 154 FHTCAVTTAGELYTWGDGTHNIGLLGHGTDLSHWIPKRISGALEGQQVAYVSCGTWHTAL 213

Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT----- 285
           +T  G + T G  T G LGHG+    P P+ +  L  + ++  +A G  +  AV      
Sbjct: 214 ITSTGQLFTFGDGTFGVLGHGNRESIPCPREVESLSGLKTIA-VACGVWHTAAVVEVIVT 272

Query: 286 ------GNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 339
                  +G ++++G G    LGHG++   ++P  + +      H  R++ G    V L 
Sbjct: 273 QSSSSISSGKLFTWGDGDKHRLGHGDKEPRVKPTCVASLIDYDFH--RIACGHSLTVGLT 330

Query: 340 SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGF 399
           +SG V+  G    G LG+    D  LP  +  +     VQV        VL     V+ +
Sbjct: 331 TSGQVWGMGNTVYGQLGN-PRSDGKLPCLVEDIMGENVVQVACGSYHVAVLTVKSEVFTW 389

Query: 400 GWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFG 453
           G    G LG  D  + D+ + P +++ LR   V  I+ G   T  +  R  + G
Sbjct: 390 GKGANGRLGHGD--IEDRKI-PTLVEVLRDRGVRHIACGANFTAAICQRKWMSG 440



 Score = 92.4 bits (228), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 84/293 (28%), Positives = 128/293 (43%), Gaps = 29/293 (9%)

Query: 116 ITTGRYHTLLISNSS---VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +  G +HT  ++ +     +  G+   G+LGHG + +  +            V  VS   
Sbjct: 149 VACGEFHTCAVTTAGELYTWGDGTHNIGLLGHGTDLSHWIPKRISGALEGQQVAYVSCGT 208

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            H A +  +GQ+FT GD +    GH +    I  PR VE+L G+    V  G+  T  + 
Sbjct: 209 WHTALITSTGQLFTFGDGTFGVLGHGN-RESIPCPREVESLSGLKTIAVACGVWHTAAVV 267

Query: 233 -----------IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 281
                        G + T G     +LGHGD   R  P  +A L +     +IA G S  
Sbjct: 268 EVIVTQSSSSISSGKLFTWGDGDKHRLGHGDKEPRVKPTCVASLIDY-DFHRIACGHSLT 326

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 341
           + +T +G V+  G+     LG+     +L P  ++     G +VV+V+ G  HV  L   
Sbjct: 327 VGLTTSGQVWGMGNTVYGQLGNPRSDGKL-PCLVEDI--MGENVVQVACGSYHVAVLTVK 383

Query: 342 GYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKS----HLA------VQVCARK 384
             V+TWGKG  G LGHGD  D+ +P  +  L+     H+A        +C RK
Sbjct: 384 SEVFTWGKGANGRLGHGDIEDRKIPTLVEVLRDRGVRHIACGANFTAAICQRK 436



 Score = 82.4 bits (202), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 77/281 (27%), Positives = 125/281 (44%), Gaps = 18/281 (6%)

Query: 204 IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 263
           +  P+ +E+   +    V  G+     +T  G V T G  + G+LGHG   D   P  + 
Sbjct: 80  VLLPKPLESKLVLDVYHVDCGVKHAALVTKNGEVFTWGEESGGRLGHGSREDYIHPSLVE 139

Query: 264 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC--LGHGEQHDELQPRAIQTFRRK 321
            L  V +V  +A G  +  AVT  G +Y++G G++    LGHG       P+ I +   +
Sbjct: 140 SL-AVSNVDFVACGEFHTCAVTTAGELYTWGDGTHNIGLLGHGTDLSHWIPKRI-SGALE 197

Query: 322 GIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVC 381
           G  V  VS G  H   + S+G ++T+G G  G LGHG+      P  + SL     + V 
Sbjct: 198 GQQVAYVSCGTWHTALITSTGQLFTFGDGTFGVLGHGNRESIPCPREVESLSGLKTIAVA 257

Query: 382 ARKRKTFVLVDT-----------GSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAH 430
                T  +V+            G ++ +G      LG  D+   +  ++P  + SL  +
Sbjct: 258 CGVWHTAAVVEVIVTQSSSSISSGKLFTWGDGDKHRLGHGDK---EPRVKPTCVASLIDY 314

Query: 431 HVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCL 471
              +I+ G   TV +T  G+++G G+    QLG+    G L
Sbjct: 315 DFHRIACGHSLTVGLTTSGQVWGMGNTVYGQLGNPRSDGKL 355



 Score = 69.3 bits (168), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 54/186 (29%), Positives = 84/186 (45%), Gaps = 4/186 (2%)

Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 351
           S  +GS+  +    +HD L P+ +++  +  + V  V  G +H   +  +G V+TWG+  
Sbjct: 63  SVRAGSDAVIRSTVRHDVLLPKPLES--KLVLDVYHVDCGVKHAALVTKNGEVFTWGEES 120

Query: 352 CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 411
            G LGHG   D   P  + SL       V   +  T  +   G +Y +G  G  ++G   
Sbjct: 121 GGRLGHGSREDYIHPSLVESLAVSNVDFVACGEFHTCAVTTAGELYTWG-DGTHNIGLLG 179

Query: 412 RGVSDKVLRP-RILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGC 470
            G       P RI  +L    V+ +S G +HT ++T  G+LF FGD     LGH      
Sbjct: 180 HGTDLSHWIPKRISGALEGQQVAYVSCGTWHTALITSTGQLFTFGDGTFGVLGHGNRESI 239

Query: 471 LEPTEI 476
             P E+
Sbjct: 240 PCPREV 245



 Score = 50.1 bits (118), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 41/131 (31%), Positives = 61/131 (46%), Gaps = 20/131 (15%)

Query: 339 DSSGYVYTWGKGYC-GALGHGDEI--------DKTLPEPLSSLKSHLAVQV----CARKR 385
           DSSG VY WG+  C  ++  G +         D  LP+P   L+S L + V    C  K 
Sbjct: 47  DSSGDVYVWGEVICENSVRAGSDAVIRSTVRHDVLLPKP---LESKLVLDVYHVDCGVKH 103

Query: 386 KTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVV 445
              V    G V+ +G    G LG    G  +  + P +++SL   +V  ++ G +HT  V
Sbjct: 104 AALV-TKNGEVFTWGEESGGRLGH---GSREDYIHPSLVESLAVSNVDFVACGEFHTCAV 159

Query: 446 TDRGRLFGFGD 456
           T  G L+ +GD
Sbjct: 160 TTAGELYTWGD 170


>gi|224061683|ref|XP_002192615.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Taeniopygia
            guttata]
          Length = 4864

 Score =  124 bits (312), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 101/339 (29%), Positives = 166/339 (48%), Gaps = 17/339 (5%)

Query: 115  QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQV---SA 170
            Q+  G+  T +I +N +V +CG    G LG G      V  T I+      V Q+     
Sbjct: 4034 QVVCGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHV-LTVISALQGFVVTQLVTSCG 4092

Query: 171  SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
            S+ H+  + +SG+VF+ GD      GH +++R   RPR +EAL+G    Q++ G   +  
Sbjct: 4093 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQMSCGFKHSAV 4151

Query: 231  LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSVVQIAAGPSYMLAVTGNG 288
            +T  G + T G+  +G+LG G+T ++  P+ +  LE  ++G   Q+A G ++ +AV+ +G
Sbjct: 4152 VTADGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIG---QVACGLNHTVAVSTDG 4208

Query: 289  -VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 347
             +V++FG G    LG G    +  P+ +      GI + +V+ G +  VAL   G+VYT+
Sbjct: 4209 SMVWAFGDGDYGKLGLGNSTAKSSPQKVDIL--CGIGIKKVACGTQFSVALTKDGHVYTF 4266

Query: 348  GKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSL 407
            G+     L  G   +   P+ +  L       +      T  L  TG VY +G    G L
Sbjct: 4267 GQDRLIGLPEGRARNHNRPQQVPLLAGVFIEDIAVGAEHTLALSSTGDVYAWGSNSEGQL 4326

Query: 408  GFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT 446
            G    G ++ V  P ++  L+  +V QIS G  H+   T
Sbjct: 4327 GL---GHTNHVREPTLVTVLQGKNVRQISAGRCHSAAWT 4362



 Score =  112 bits (281), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 106/380 (27%), Positives = 168/380 (44%), Gaps = 31/380 (8%)

Query: 96  FLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFT 155
           F +    +SD   T A    I TG    ++     V+  GS+    L  G +        
Sbjct: 340 FEEVCRMASDYSRTCASPDSIQTGDA-PIVSETCEVYVWGSNSSHQLVEGTQE----KIL 394

Query: 156 RINFPSAAHVVQVSASENHAAFVLQS-GQVFTCGDNSSFCCGHRDTN------RPIFRPR 208
           +    S+    Q   +  +  FV+ + G V  CG  S    G  D+N      +  F P 
Sbjct: 395 QPKLASSFSDAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPH 454

Query: 209 LVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEV 268
              ++K V   + + G   T   T  G V + G   +G+LGHG++  +  PK I    + 
Sbjct: 455 --RSIKKVSSSKGSDG--HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQG 510

Query: 269 GSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRV 328
             VV ++AG  +  AVT +G +Y++G G    LGHG+ +     R I T  +  I+V  V
Sbjct: 511 KVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNS----RNIPTLVKDIINVGEV 566

Query: 329 SAGDEHVVALDSSGY-VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKT 387
           S G  H +AL   G  V+++G G  G LGHGD      P+ + +L+     +VCA  + +
Sbjct: 567 SCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSS 626

Query: 388 FVLVDTGSVYGFG---WMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV 444
             L  TG VY +G    +G GS            LRP++++ L A  +  IS G  H + 
Sbjct: 627 LALTSTGQVYAWGCGACLGCGS-------SEATALRPKLIEELAATRIVDISIGDSHCLA 679

Query: 445 VTDRGRLFGFGDNERAQLGH 464
           ++    ++ +G+N   Q G 
Sbjct: 680 LSHDNEVYAWGNNSMGQCGQ 699



 Score =  104 bits (260), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 77/263 (29%), Positives = 127/263 (48%), Gaps = 8/263 (3%)

Query: 217  PCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSVVQI 274
            P +QV  G N T  +   G V  CG  ++G+LG G++ D      I+ L+   V  +V  
Sbjct: 4031 PAQQVVCGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTS 4090

Query: 275  AAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEH 334
                 + +A+T +G V+S+G G    LGHG    + +PR I+    +G  VV++S G +H
Sbjct: 4091 CGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEAL--QGEEVVQMSCGFKH 4148

Query: 335  VVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDT 393
               + + G ++T+G G  G LG G+  +K LPE +++L+ +   QV C       V  D 
Sbjct: 4149 SAVVTADGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTVAVSTDG 4208

Query: 394  GSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFG 453
              V+ FG   +G LG    G S     P+ +D L    + +++ G   +V +T  G ++ 
Sbjct: 4209 SMVWAFGDGDYGKLGL---GNSTAKSSPQKVDILCGIGIKKVACGTQFSVALTKDGHVYT 4265

Query: 454  FGDNERAQLGHDTLRGCLEPTEI 476
            FG +    L     R    P ++
Sbjct: 4266 FGQDRLIGLPEGRARNHNRPQQV 4288



 Score = 98.6 bits (244), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 89/324 (27%), Positives = 151/324 (46%), Gaps = 13/324 (4%)

Query: 160  PSAAHVVQVSASENHAAFVLQS-GQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPC 218
            PS +   QV   +N   FV+Q+ G V  CG+ S    G  +++  +    ++ AL+G   
Sbjct: 4027 PSFSPAQQVVCGQN-CTFVIQANGTVLACGEGSYGRLGQGNSDD-LHVLTVISALQGFVV 4084

Query: 219  KQVTAGLNFTGF---LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA 275
             Q+       G    LT  G V + G   +G+LGHG++  +  P+ I  L+    VVQ++
Sbjct: 4085 TQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQG-EEVVQMS 4143

Query: 276  AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHV 335
             G  +   VT +G +++FG+G    LG G   ++  P  +     +G  + +V+ G  H 
Sbjct: 4144 CGFKHSAVVTADGKLFTFGNGDYGRLGLGNTSNKKLPERVTAL--EGYQIGQVACGLNHT 4201

Query: 336  VALDSSG-YVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 394
            VA+ + G  V+ +G G  G LG G+   K+ P+ +  L      +V    + +  L   G
Sbjct: 4202 VAVSTDGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDILCGIGIKKVACGTQFSVALTKDG 4261

Query: 395  SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 454
             VY FG      +G P+ G +    RP+ +  L    +  I+ G  HT+ ++  G ++ +
Sbjct: 4262 HVYTFGQDRL--IGLPE-GRARNHNRPQQVPLLAGVFIEDIAVGAEHTLALSSTGDVYAW 4318

Query: 455  GDNERAQLGHDTLRGCLEPTEIFI 478
            G N   QLG        EPT + +
Sbjct: 4319 GSNSEGQLGLGHTNHVREPTLVTV 4342



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 68/231 (29%), Positives = 108/231 (46%), Gaps = 13/231 (5%)

Query: 237  VHTCGSNTHGQLGHG--DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 294
            V+  G+  HGQL     + +      S +P +      Q+  G +    +  NG V + G
Sbjct: 4002 VYLWGAGRHGQLAEAGRNVMIPAAAPSFSPAQ------QVVCGQNCTFVIQANGTVLACG 4055

Query: 295  SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG-DEHVVALDSSGYVYTWGKGYCG 353
             GS   LG G   D      I   +   +  +  S G D H +AL  SG V++WG G  G
Sbjct: 4056 EGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYG 4115

Query: 354  ALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRG 413
             LGHG+   +  P  + +L+    VQ+    + + V+   G ++ FG   +G LG  +  
Sbjct: 4116 KLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTADGKLFTFGNGDYGRLGLGN-- 4173

Query: 414  VSDKVLRPRILDSLRAHHVSQISTGLYHTVVV-TDRGRLFGFGDNERAQLG 463
             S+K L P  + +L  + + Q++ GL HTV V TD   ++ FGD +  +LG
Sbjct: 4174 TSNKKL-PERVTALEGYQIGQVACGLNHTVAVSTDGSMVWAFGDGDYGKLG 4223



 Score = 48.5 bits (114), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 41/143 (28%), Positives = 67/143 (46%), Gaps = 9/143 (6%)

Query: 344  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 403
            VY WG G  G L    E  + +  P ++     A QV   +  TFV+   G+V   G   
Sbjct: 4002 VYLWGAGRHGQLA---EAGRNVMIPAAAPSFSPAQQVVCGQNCTFVIQANGTVLACGEGS 4058

Query: 404  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLY---HTVVVTDRGRLFGFGDNERA 460
            +G LG   +G SD +    ++ +L+   V+Q+ T      H++ +T+ G +F +GD +  
Sbjct: 4059 YGRLG---QGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYG 4115

Query: 461  QLGHDTLRGCLEPTEIFIQEMEE 483
            +LGH        P +I   + EE
Sbjct: 4116 KLGHGNSDRQRRPRQIEALQGEE 4138



 Score = 47.8 bits (112), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 28/100 (28%), Positives = 48/100 (48%), Gaps = 2/100 (2%)

Query: 125 LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQV 184
           L S   V++ G   C  LG G      +    I   +A  +V +S  ++H   +    +V
Sbjct: 629 LTSTGQVYAWGCGAC--LGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEV 686

Query: 185 FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           +  G+NS   CG  ++  PI +P+ V  L G+  +Q++AG
Sbjct: 687 YAWGNNSMGQCGQGNSTGPITKPKKVGGLDGIAIQQISAG 726


>gi|327286813|ref|XP_003228124.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein ligase
            HERC1-like [Anolis carolinensis]
          Length = 4963

 Score =  124 bits (312), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 100/337 (29%), Positives = 166/337 (49%), Gaps = 17/337 (5%)

Query: 115  QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQV---SA 170
            Q+  G+  T +I +N +V +CG    G LG G      V  T I+      V Q+     
Sbjct: 4122 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHV-LTVISALQGFVVTQLVTSCG 4180

Query: 171  SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
            S+ H+  + +SG+VF+ GD      GH +++R   RPR +EAL+G    Q++ G   +  
Sbjct: 4181 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQMSCGFKHSAV 4239

Query: 231  LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSVVQIAAGPSYMLAVTGNG 288
            +T  G + T G+  +G+LG G+T ++  P+ +A LE  ++G   ++A G ++ L V+ +G
Sbjct: 4240 VTADGKLFTFGNGDYGRLGLGNTSNKKLPERVAALEGYQIG---EVACGLNHTLVVSTDG 4296

Query: 289  -VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 347
             +V++FG G    LG G    +  P+ +      GI + +V+ G +  VAL   G+VYT+
Sbjct: 4297 SMVWAFGDGDYGKLGLGNSTAKSSPQKVDIL--CGIGIKKVACGTQFSVALTKDGHVYTF 4354

Query: 348  GKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSL 407
            G+     L  G   +   P+ + +L       +      T  L  +G VY +G    G L
Sbjct: 4355 GQDRLIGLPEGRARNHNRPQQVPALSGVFVEDIAVGAEHTLALSASGDVYAWGSNSEGQL 4414

Query: 408  GFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV 444
            G    G ++ V  P ++ SL+   V QIS G  H+  
Sbjct: 4415 GL---GHTNHVREPTLVTSLQGKSVRQISAGRCHSAA 4448



 Score =  112 bits (281), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 106/379 (27%), Positives = 165/379 (43%), Gaps = 28/379 (7%)

Query: 96  FLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFT 155
           F +    +SD   T A    I TG    ++     V+  GS+    L  G   TQ     
Sbjct: 341 FEEVCRMASDYSRTCASPDSIQTGGDAPVVSETCEVYVWGSNSSHQLVEG---TQEKILQ 397

Query: 156 RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTN------RPIFRPRL 209
               PS +    + A +     +   G V  CG  S    G  D+N      +  F P  
Sbjct: 398 PKLAPSFSDAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPH- 456

Query: 210 VEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG 269
             ++K V   + + G   T   T  G V + G   +G+LGHG++  +  PK I    +  
Sbjct: 457 -RSIKKVSSSKGSDG--HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGK 513

Query: 270 SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS 329
            VV ++AG  +  AVT +G +Y++G G    LGHG+ +     R I T  +   +V  VS
Sbjct: 514 VVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNS----RNIPTLVKDISNVGEVS 569

Query: 330 AGDEHVVALDSSGY-VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTF 388
            G  H +AL   G  V+++G G  G LGHGD      P+ + +L+     +VCA  + + 
Sbjct: 570 CGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSL 629

Query: 389 VLVDTGSVYGFG---WMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVV 445
            L  TG VY +G    +G GS            LRP++++ L A  +  IS G  H + +
Sbjct: 630 ALTSTGQVYAWGCGACLGCGS-------SEATALRPKLIEELAATRIVDISIGDSHCLAL 682

Query: 446 TDRGRLFGFGDNERAQLGH 464
           +    ++ +G+N   Q G 
Sbjct: 683 SHDNEVYAWGNNSMGQCGQ 701



 Score = 96.7 bits (239), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 88/320 (27%), Positives = 147/320 (45%), Gaps = 13/320 (4%)

Query: 160  PSAAHVVQVSASENHAAFVLQS-GQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPC 218
            PS     QV   +N   FV+Q+ G V  CG+ S    G  +++  +    ++ AL+G   
Sbjct: 4115 PSFCQAQQVICGQN-CTFVIQANGTVLACGEGSYGRLGQGNSDD-LHVLTVISALQGFVV 4172

Query: 219  KQVTAGLNFTGF---LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA 275
             Q+       G    LT  G V + G   +G+LGHG++  +  P+ I  L+    VVQ++
Sbjct: 4173 TQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQG-EEVVQMS 4231

Query: 276  AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHV 335
             G  +   VT +G +++FG+G    LG G   ++  P  +     +G  +  V+ G  H 
Sbjct: 4232 CGFKHSAVVTADGKLFTFGNGDYGRLGLGNTSNKKLPERVAAL--EGYQIGEVACGLNHT 4289

Query: 336  VALDSSG-YVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 394
            + + + G  V+ +G G  G LG G+   K+ P+ +  L      +V    + +  L   G
Sbjct: 4290 LVVSTDGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDILCGIGIKKVACGTQFSVALTKDG 4349

Query: 395  SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 454
             VY FG      +G P+ G +    RP+ + +L    V  I+ G  HT+ ++  G ++ +
Sbjct: 4350 HVYTFGQDRL--IGLPE-GRARNHNRPQQVPALSGVFVEDIAVGAEHTLALSASGDVYAW 4406

Query: 455  GDNERAQLGHDTLRGCLEPT 474
            G N   QLG        EPT
Sbjct: 4407 GSNSEGQLGLGHTNHVREPT 4426



 Score = 84.7 bits (208), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 68/230 (29%), Positives = 105/230 (45%), Gaps = 11/230 (4%)

Query: 237  VHTCGSNTHGQLGH-GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 295
            V   G+  HGQL   G     P P             Q+  G +    +  NG V + G 
Sbjct: 4090 VFLWGAGRHGQLAEAGRNAVSPPPSP-----SFCQAQQVICGQNCTFVIQANGTVLACGE 4144

Query: 296  GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG-DEHVVALDSSGYVYTWGKGYCGA 354
            GS   LG G   D      I   +   +  +  S G D H +AL  SG V++WG G  G 
Sbjct: 4145 GSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGK 4204

Query: 355  LGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGV 414
            LGHG+   +  P  + +L+    VQ+    + + V+   G ++ FG   +G LG  +   
Sbjct: 4205 LGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTADGKLFTFGNGDYGRLGLGN--T 4262

Query: 415  SDKVLRPRILDSLRAHHVSQISTGLYHTVVV-TDRGRLFGFGDNERAQLG 463
            S+K L P  + +L  + + +++ GL HT+VV TD   ++ FGD +  +LG
Sbjct: 4263 SNKKL-PERVAALEGYQIGEVACGLNHTLVVSTDGSMVWAFGDGDYGKLG 4311



 Score = 49.3 bits (116), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 29/100 (29%), Positives = 48/100 (48%), Gaps = 2/100 (2%)

Query: 125 LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQV 184
           L S   V++ G   C  LG G      +    I   +A  +V +S  ++H   +    +V
Sbjct: 631 LTSTGQVYAWGCGAC--LGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEV 688

Query: 185 FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           +  G+NS   CG  ++  PI +P+ V  L GV  +Q++AG
Sbjct: 689 YAWGNNSMGQCGQGNSTGPITKPKKVSGLDGVAIQQISAG 728



 Score = 46.6 bits (109), Expect = 0.028,   Method: Compositional matrix adjust.
 Identities = 41/143 (28%), Positives = 65/143 (45%), Gaps = 9/143 (6%)

Query: 344  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 403
            V+ WG G  G L      +   P P  S     A QV   +  TFV+   G+V   G   
Sbjct: 4090 VFLWGAGRHGQLAEAGR-NAVSPPPSPSFCQ--AQQVICGQNCTFVIQANGTVLACGEGS 4146

Query: 404  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLY---HTVVVTDRGRLFGFGDNERA 460
            +G LG   +G SD +    ++ +L+   V+Q+ T      H++ +T+ G +F +GD +  
Sbjct: 4147 YGRLG---QGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYG 4203

Query: 461  QLGHDTLRGCLEPTEIFIQEMEE 483
            +LGH        P +I   + EE
Sbjct: 4204 KLGHGNSDRQRRPRQIEALQGEE 4226


>gi|255081710|ref|XP_002508077.1| E3 ubiquitin-protein ligase [Micromonas sp. RCC299]
 gi|226523353|gb|ACO69335.1| E3 ubiquitin-protein ligase [Micromonas sp. RCC299]
          Length = 1348

 Score =  124 bits (312), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 103/326 (31%), Positives = 148/326 (45%), Gaps = 29/326 (8%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNS----SFCCGHRDTNRPIFRPRLVEALKGVP-CK 219
           V  V+    H+  V  +G+V+  GD S    +     R     I  P +      +P   
Sbjct: 210 VTHVAGGARHSVAVTSAGEVYAFGDCSGEGKALSAPTRLREAVIDPPEVTATTNAMPRVA 269

Query: 220 QVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLD------------RPTPKSIAPLEE 267
            V  G      +T  G + + G+   GQLG G   D            R    S+ P   
Sbjct: 270 TVACGQRHCAAVTTSGVLLSWGNEEFGQLGQGPPRDSSSKGDAKSLIRRRADASMMP-RL 328

Query: 268 VGS----VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGI 323
           VGS       +A G  + LA+T NG V+SFG G+   LGHG++ +   PR +      G+
Sbjct: 329 VGSGHVKFTSVACGAGHTLALTANGRVFSFGRGAFGALGHGDRLNCDVPRLVDAL--WGV 386

Query: 324 HVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSH--LAVQVC 381
            V +++AGD H  +L +SG VYTWG+G  GALGH D  +++ P P+ +L        Q+ 
Sbjct: 387 GVAQIAAGDNHSASLSASGRVYTWGRGKYGALGHRDVDNRSRPTPVQALDDAGVRCEQIA 446

Query: 382 ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDS--LRAHHVSQISTGL 439
                T  +   GS     W G GS G    G +  VL P I+D   L    V QIS G 
Sbjct: 447 CGGDHTLAIAGGGSGVLLAW-GRGSSGPAGTGATADVLTPTIIDRALLGDEKVFQISAGS 505

Query: 440 YHTVVVTDRGRLFGFGDNERAQLGHD 465
            H+V VT+ G ++ +G   + QLGH+
Sbjct: 506 KHSVAVTEGGCVYTWGARTQGQLGHE 531



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 68/244 (27%), Positives = 102/244 (41%), Gaps = 32/244 (13%)

Query: 257 PTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGE--------QHD 308
           PTP+S++ L+    V  +A G  + +AVT  G VY+FG     C G G+        +  
Sbjct: 197 PTPRSVSSLDGR-DVTHVAGGARHSVAVTSAGEVYAFGD----CSGEGKALSAPTRLREA 251

Query: 309 ELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEP 368
            + P  +         V  V+ G  H  A+ +SG + +WG    G LG G   D +    
Sbjct: 252 VIDPPEVTATTNAMPRVATVACGQRHCAAVTTSGVLLSWGNEEFGQLGQGPPRDSSSKGD 311

Query: 369 LSSLKSHLA----------------VQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDR 412
             SL    A                  V      T  L   G V+ FG   FG+LG  DR
Sbjct: 312 AKSLIRRRADASMMPRLVGSGHVKFTSVACGAGHTLALTANGRVFSFGRGAFGALGHGDR 371

Query: 413 GVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLE 472
              D    PR++D+L    V+QI+ G  H+  ++  GR++ +G  +   LGH  +     
Sbjct: 372 LNCDV---PRLVDALWGVGVAQIAAGDNHSASLSASGRVYTWGRGKYGALGHRDVDNRSR 428

Query: 473 PTEI 476
           PT +
Sbjct: 429 PTPV 432



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 72/197 (36%), Positives = 97/197 (49%), Gaps = 14/197 (7%)

Query: 116 ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           +  G  HTL L +N  VFS G    G LGHG +   C     ++      V Q++A +NH
Sbjct: 339 VACGAGHTLALTANGRVFSFGRGAFGALGHG-DRLNCDVPRLVDALWGVGVAQIAAGDNH 397

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDT-NRPIFRPRLVEALK--GVPCKQVTAGLNFTGFL 231
           +A +  SG+V+T G       GHRD  NR   RP  V+AL   GV C+Q+  G + T  L
Sbjct: 398 SASLSASGRVYTWGRGKYGALGHRDVDNRS--RPTPVQALDDAGVRCEQIACGGDHT--L 453

Query: 232 TIRGH----VHTCGSNTHGQLGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSYMLAVTG 286
            I G     +   G  + G  G G T D  TP  I   L     V QI+AG  + +AVT 
Sbjct: 454 AIAGGGSGVLLAWGRGSSGPAGTGATADVLTPTIIDRALLGDEKVFQISAGSKHSVAVTE 513

Query: 287 NGVVYSFGSGSNFCLGH 303
            G VY++G+ +   LGH
Sbjct: 514 GGCVYTWGARTQGQLGH 530


>gi|300798276|ref|NP_001179573.1| probable E3 ubiquitin-protein ligase HERC6 [Bos taurus]
          Length = 1016

 Score =  124 bits (312), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 92/275 (33%), Positives = 135/275 (49%), Gaps = 7/275 (2%)

Query: 193 FCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGD 252
           + C      RP+ R R V A  G    Q  +G + +  L   G V +CG N+ GQLG   
Sbjct: 2   YFCWRAGGRRPL-RERQVCA-GGNTLLQAASGEHHSLLLLSDGTVQSCGDNSRGQLGRKG 59

Query: 253 TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGE-QHDELQ 311
           T     P+ I  LE + +V  ++ G  + LAV   G V+++G+ S   LG GE +     
Sbjct: 60  TPRGEQPERIPALETL-NVALVSCGKEHSLAVCHKGRVFAWGAASEGQLGIGEFKETTFI 118

Query: 312 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEI-DKTLPEPLS 370
           P+ I+T    GI +++V+ G  H VAL   G V++WG    G LG G E   +  P+ + 
Sbjct: 119 PKKIKTL--AGIKIIQVACGHYHSVALSEDGQVFSWGTNSHGQLGLGKEFPSQASPQRVR 176

Query: 371 SLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAH 430
           SL+     QV A    +F L  +G+ +G+G    G L         +  +P  + +L+  
Sbjct: 177 SLEGIPLAQVAAGGHHSFALSLSGTSFGWGSNSAGQLALSGNNAPVQRYKPVSIGALKTL 236

Query: 431 HVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHD 465
            V  IS G  HT V+T  G++F FGDN   QLGHD
Sbjct: 237 GVVSISCGYKHTAVLTQDGKVFTFGDNSYGQLGHD 271



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 84/297 (28%), Positives = 151/297 (50%), Gaps = 14/297 (4%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           ++Q ++ E+H+  +L  G V +CGDNS    G + T R   +P  + AL+ +    V+ G
Sbjct: 25  LLQAASGEHHSLLLLSDGTVQSCGDNSRGQLGRKGTPRGE-QPERIPALETLNVALVSCG 83

Query: 225 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRP-TPKSIAPLEEVGSVVQIAAGPSYMLA 283
              +  +  +G V   G+ + GQLG G+  +    PK I  L  +  ++Q+A G  + +A
Sbjct: 84  KEHSLAVCHKGRVFAWGAASEGQLGIGEFKETTFIPKKIKTLAGI-KIIQVACGHYHSVA 142

Query: 284 VTGNGVVYSFGSGSNFCLGHGEQH-DELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
           ++ +G V+S+G+ S+  LG G++   +  P+ +++   +GI + +V+AG  H  AL  SG
Sbjct: 143 LSEDGQVFSWGTNSHGQLGLGKEFPSQASPQRVRSL--EGIPLAQVAAGGHHSFALSLSG 200

Query: 343 YVYTWGKGYCGAL---GHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGF 399
             + WG    G L   G+   + +  P  + +LK+   V +    + T VL   G V+ F
Sbjct: 201 TSFGWGSNSAGQLALSGNNAPVQRYKPVSIGALKTLGVVSISCGYKHTAVLTQDGKVFTF 260

Query: 400 GWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV-VTDRGRLFGFG 455
           G   +G LG      + +   P++++ +    VSQI  G  HT+  +   G++  FG
Sbjct: 261 GDNSYGQLG---HDPTAEKRGPQLVERIEG-LVSQIDCGSDHTLAYIYTTGQVVSFG 313



 Score = 98.2 bits (243), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 85/294 (28%), Positives = 136/294 (46%), Gaps = 13/294 (4%)

Query: 114 MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHG--PETTQCVSFTRINFPSAAHVVQVSA 170
           +Q  +G +H+LL+ S+ +V SCG +  G LG    P   Q     RI      +V  VS 
Sbjct: 26  LQAASGEHHSLLLLSDGTVQSCGDNSRGQLGRKGTPRGEQP---ERIPALETLNVALVSC 82

Query: 171 SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
            + H+  V   G+VF  G  S    G  +     F P+ ++ L G+   QV  G   +  
Sbjct: 83  GKEHSLAVCHKGRVFAWGAASEGQLGIGEFKETTFIPKKIKTLAGIKIIQVACGHYHSVA 142

Query: 231 LTIRGHVHTCGSNTHGQLGHGDTL-DRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 289
           L+  G V + G+N+HGQLG G     + +P+ +  LE +  + Q+AAG  +  A++ +G 
Sbjct: 143 LSEDGQVFSWGTNSHGQLGLGKEFPSQASPQRVRSLEGI-PLAQVAAGGHHSFALSLSGT 201

Query: 290 VYSFGSGSNFCL---GHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYT 346
            + +GS S   L   G+       +P +I   +  G  VV +S G +H   L   G V+T
Sbjct: 202 SFGWGSNSAGQLALSGNNAPVQRYKPVSIGALKTLG--VVSISCGYKHTAVLTQDGKVFT 259

Query: 347 WGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 400
           +G    G LGH    +K  P+ +  ++  ++   C        +  TG V  FG
Sbjct: 260 FGDNSYGQLGHDPTAEKRGPQLVERIEGLVSQIDCGSDHTLAYIYTTGQVVSFG 313


>gi|195482069|ref|XP_002101897.1| GE17877 [Drosophila yakuba]
 gi|194189421|gb|EDX03005.1| GE17877 [Drosophila yakuba]
          Length = 2660

 Score =  124 bits (312), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 101/347 (29%), Positives = 162/347 (46%), Gaps = 8/347 (2%)

Query: 129  SSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCG 188
            S+++  G +  G LG G E ++  + T     S    VQ++  E     V   G++F  G
Sbjct: 1797 STIYGWGHNHRGQLG-GLEGSRIKTPTPCEALSLLRPVQLAGGEQSLFAVTPDGKLFATG 1855

Query: 189  DNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQV--TAGLNFTGFLTIRGHVHTCGSNTHG 246
              S    G   ++     P L+ +L+ V  K+V   +G      LT  G V+  G    G
Sbjct: 1856 YGSGGRLGVGGSDSWAI-PTLLGSLQHVFVKKVAVNSGGKHCLALTTEGEVYAWGEGEDG 1914

Query: 247  QLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ 306
            +LGHG+ +    PK +  L  + SV  IA G ++  A+T +G V ++G G    LGHG+ 
Sbjct: 1915 KLGHGNRMSYDRPKLVEHLNGM-SVADIACGSAHSAAITASGHVLTWGKGRYGRLGHGDS 1973

Query: 307  HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP 366
             D+L+P+ ++         +   +GD   + +     V++WG G  G LG G      LP
Sbjct: 1974 EDQLRPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKLP 2033

Query: 367  EPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDS 426
              + SL     V+V    + +  L  +G+VY +G   F  LG    G  D V RP+ + +
Sbjct: 2034 YKIESLAGLGVVKVECGSQFSVALTKSGAVYTWGKGDFHRLG---HGSVDHVRRPKKVAA 2090

Query: 427  LRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEP 473
            L+   +  I+TG  H V  +D G ++ +GDN+  QLG  T+     P
Sbjct: 2091 LQGKKIISIATGSLHCVACSDSGEVYTWGDNDEGQLGDGTVTAIQRP 2137



 Score =  122 bits (307), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 86/283 (30%), Positives = 138/283 (48%), Gaps = 9/283 (3%)

Query: 166  VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIF-RPRLVEALKGVPCKQVTAG 224
            V V++   H   +   G+V+  G+      GH   NR  + RP+LVE L G+    +  G
Sbjct: 1887 VAVNSGGKHCLALTTEGEVYAWGEGEDGKLGH--GNRMSYDRPKLVEHLNGMSVADIACG 1944

Query: 225  LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSV-VQIAAGPSYMLA 283
               +  +T  GHV T G   +G+LGHGD+ D+  PK +  L    ++ +   +G +  L 
Sbjct: 1945 SAHSAAITASGHVLTWGKGRYGRLGHGDSEDQLRPKLVEALLGYRAIDIACGSGDAQTLC 2004

Query: 284  VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 343
            +T +  V+S+G G    LG G       P  I++    G+ VV+V  G +  VAL  SG 
Sbjct: 2005 ITDDDNVWSWGDGDYGKLGRGGSDGCKLPYKIESL--AGLGVVKVECGSQFSVALTKSGA 2062

Query: 344  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 403
            VYTWGKG    LGHG       P+ +++L+    + +           D+G VY +G   
Sbjct: 2063 VYTWGKGDFHRLGHGSVDHVRRPKKVAALQGKKIISIATGSLHCVACSDSGEVYTWGDND 2122

Query: 404  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT 446
             G LG    G    + RPR++ +L+  H+ +++ G  HT+ ++
Sbjct: 2123 EGQLG---DGTVTAIQRPRLVAALQGKHIVKVTCGSAHTLALS 2162



 Score =  121 bits (304), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 101/338 (29%), Positives = 157/338 (46%), Gaps = 17/338 (5%)

Query: 114  MQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTR---INFPSAAHVVQVS 169
            + I  G     ++S +  V++CG    G LG G   T  V       +        V V 
Sbjct: 768  IHIAGGSKSLFIVSQDGKVYACGEGTNGRLGLG--VTHNVPLPHQLPVLHQYVVKKVAVH 825

Query: 170  ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIF-RPRLVEALKGVPCKQVTAGLNFT 228
            +   HA  +   G+VF+ G+      GH   NR    +PRLVEAL+    + V  G + +
Sbjct: 826  SGGKHALALTLDGKVFSWGEGEDGKLGH--GNRTTLDKPRLVEALRAKKIRDVACGSSHS 883

Query: 229  GFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGP--SYMLAVTG 286
              ++ +G ++T G   +G+LGHGD   +  PK +  L     VVQ+A G   +  LA+T 
Sbjct: 884  AAISSQGELYTWGLGEYGRLGHGDNATQLKPKLVTALAGR-RVVQVACGSRDAQTLALTE 942

Query: 287  NGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYT 346
            +G V+S+G G    LG G       P  I+  R  GI VV++  G +  +AL  +G V+T
Sbjct: 943  DGAVFSWGDGDFGKLGRGGSEGSDTPHEIE--RLSGIGVVQIECGAQFSLALTRAGEVWT 1000

Query: 347  WGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGS 406
            WGKG    LGHG +     P+P+  L+    + V         + D G VY +G    G 
Sbjct: 1001 WGKGDYYRLGHGGDQHVRKPQPIGGLRGRRVIHVAVGALHCLAVTDAGQVYAWGDNDHGQ 1060

Query: 407  LGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV 444
             G  +  V+ K   P ++  L A  V++++ G  H++ 
Sbjct: 1061 QGSGNTFVNKK---PALVIGLDAVFVNRVACGSSHSIA 1095



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 87/294 (29%), Positives = 138/294 (46%), Gaps = 17/294 (5%)

Query: 177  FVLQSGQVFTCGDNSSFCCGHRDT-NRPIFRPRLVEALKGVPCKQVT--AGLNFTGFLTI 233
             V Q G+V+ CG+ ++   G   T N P+  P  +  L     K+V   +G      LT+
Sbjct: 779  IVSQDGKVYACGEGTNGRLGLGVTHNVPL--PHQLPVLHQYVVKKVAVHSGGKHALALTL 836

Query: 234  RGHVHTCGSNTHGQLGHGD--TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
             G V + G    G+LGHG+  TLD+P    +        +  +A G S+  A++  G +Y
Sbjct: 837  DGKVFSWGEGEDGKLGHGNRTTLDKP---RLVEALRAKKIRDVACGSSHSAAISSQGELY 893

Query: 292  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEHVVALDSSGYVYTWGK 349
            ++G G    LGHG+   +L+P+ +      G  VV+V+ G  D   +AL   G V++WG 
Sbjct: 894  TWGLGEYGRLGHGDNATQLKPKLVTAL--AGRRVVQVACGSRDAQTLALTEDGAVFSWGD 951

Query: 350  GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGF 409
            G  G LG G       P  +  L     VQ+    + +  L   G V+ +G   +  LG 
Sbjct: 952  GDFGKLGRGGSEGSDTPHEIERLSGIGVVQIECGAQFSLALTRAGEVWTWGKGDYYRLG- 1010

Query: 410  PDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 463
               G    V +P+ +  LR   V  ++ G  H + VTD G+++ +GDN+  Q G
Sbjct: 1011 --HGGDQHVRKPQPIGGLRGRRVIHVAVGALHCLAVTDAGQVYAWGDNDHGQQG 1062



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 82/284 (28%), Positives = 127/284 (44%), Gaps = 14/284 (4%)

Query: 113  NMQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTR---INFPSAAHVVQV 168
             + + +G  H L L +   V++ G    G LGHG      +S+ R   +   +   V  +
Sbjct: 1886 KVAVNSGGKHCLALTTEGEVYAWGEGEDGKLGHGNR----MSYDRPKLVEHLNGMSVADI 1941

Query: 169  SASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFT 228
            +    H+A +  SG V T G       GH D+   + RP+LVEAL G     +  G    
Sbjct: 1942 ACGSAHSAAITASGHVLTWGKGRYGRLGHGDSEDQL-RPKLVEALLGYRAIDIACGSGDA 2000

Query: 229  GFLTIRG--HVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTG 286
              L I    +V + G   +G+LG G +     P  I  L  +G VV++  G  + +A+T 
Sbjct: 2001 QTLCITDDDNVWSWGDGDYGKLGRGGSDGCKLPYKIESLAGLG-VVKVECGSQFSVALTK 2059

Query: 287  NGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYT 346
            +G VY++G G    LGHG      +P+ +     +G  ++ ++ G  H VA   SG VYT
Sbjct: 2060 SGAVYTWGKGDFHRLGHGSVDHVRRPKKVAAL--QGKKIISIATGSLHCVACSDSGEVYT 2117

Query: 347  WGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVL 390
            WG    G LG G       P  +++L+    V+V      T  L
Sbjct: 2118 WGDNDEGQLGDGTVTAIQRPRLVAALQGKHIVKVTCGSAHTLAL 2161



 Score = 93.2 bits (230), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 70/245 (28%), Positives = 114/245 (46%), Gaps = 12/245 (4%)

Query: 237 VHTCGSNTHGQLG--HGDTLDRPT-PKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
           V   G N   QLG   G  +  PT  ++I+ L  +     IA G   +  V+ +G VY+ 
Sbjct: 734 VMVWGLNDKEQLGGLKGSKVKVPTFSQTISRLRPI----HIAGGSKSLFIVSQDGKVYAC 789

Query: 294 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 353
           G G+N  LG G  H+   P  +    +  +  V V +G +H +AL   G V++WG+G  G
Sbjct: 790 GEGTNGRLGLGVTHNVPLPHQLPVLHQYVVKKVAVHSGGKHALALTLDGKVFSWGEGEDG 849

Query: 354 ALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRG 413
            LGHG+      P  + +L++     V      +  +   G +Y +G   +G LG  D  
Sbjct: 850 KLGHGNRTTLDKPRLVEALRAKKIRDVACGSSHSAAISSQGELYTWGLGEYGRLGHGDNA 909

Query: 414 VSDKVLRPRILDSLRAHHVSQISTGL--YHTVVVTDRGRLFGFGDNERAQLGHDTLRGCL 471
                L+P+++ +L    V Q++ G     T+ +T+ G +F +GD +  +LG     G  
Sbjct: 910 TQ---LKPKLVTALAGRRVVQVACGSRDAQTLALTEDGAVFSWGDGDFGKLGRGGSEGSD 966

Query: 472 EPTEI 476
            P EI
Sbjct: 967 TPHEI 971



 Score = 89.0 bits (219), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 75/258 (29%), Positives = 125/258 (48%), Gaps = 16/258 (6%)

Query: 224  GLNFTGFLTIRGHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSY 280
             L++ G  TI G  H    N  GQLG   G  +  PTP ++++ L  V    Q+A G   
Sbjct: 1790 ALSWGGASTIYGWGH----NHRGQLGGLEGSRIKTPTPCEALSLLRPV----QLAGGEQS 1841

Query: 281  MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 340
            + AVT +G +++ G GS   LG G       P  + + +   +  V V++G +H +AL +
Sbjct: 1842 LFAVTPDGKLFATGYGSGGRLGVGGSDSWAIPTLLGSLQHVFVKKVAVNSGGKHCLALTT 1901

Query: 341  SGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 400
             G VY WG+G  G LGHG+ +    P+ +  L       +      +  +  +G V  +G
Sbjct: 1902 EGEVYAWGEGEDGKLGHGNRMSYDRPKLVEHLNGMSVADIACGSAHSAAITASGHVLTWG 1961

Query: 401  WMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDNE 458
               +G LG  D   S+  LRP+++++L  +    I+  +G   T+ +TD   ++ +GD +
Sbjct: 1962 KGRYGRLGHGD---SEDQLRPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGD 2018

Query: 459  RAQLGHDTLRGCLEPTEI 476
              +LG     GC  P +I
Sbjct: 2019 YGKLGRGGSDGCKLPYKI 2036



 Score = 45.1 bits (105), Expect = 0.084,   Method: Compositional matrix adjust.
 Identities = 35/135 (25%), Positives = 63/135 (46%), Gaps = 5/135 (3%)

Query: 332  DEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 391
            D+  ++   +  +Y WG  + G LG  +      P P  +L     VQ+   ++  F + 
Sbjct: 1787 DDWALSWGGASTIYGWGHNHRGQLGGLEGSRIKTPTPCEALSLLRPVQLAGGEQSLFAVT 1846

Query: 392  DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRG 449
              G ++     G+GS G    G SD    P +L SL+   V +++  +G  H + +T  G
Sbjct: 1847 PDGKLFA---TGYGSGGRLGVGGSDSWAIPTLLGSLQHVFVKKVAVNSGGKHCLALTTEG 1903

Query: 450  RLFGFGDNERAQLGH 464
             ++ +G+ E  +LGH
Sbjct: 1904 EVYAWGEGEDGKLGH 1918


>gi|58533120|gb|AAW78916.1| putative chromosome condensation factor [Triticum aestivum]
          Length = 907

 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 102/327 (31%), Positives = 156/327 (47%), Gaps = 24/327 (7%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V  V     HA+ V ++G+VFT G++S    GH  T      PRLVE+L       V  G
Sbjct: 79  VYHVDCGVRHASLVTRNGEVFTWGEDSGGRLGH-GTREDSVHPRLVESLAACNIDFVACG 137

Query: 225 LNFTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSYM 281
              T  +T  G ++T G  TH  G LGHG  +    P+ I+ PLE +  +  ++ G  + 
Sbjct: 138 EFHTCAVTTTGELYTWGDGTHNVGLLGHGTDVGHWIPRRISGPLEGL-QIAYVSCGTWHT 196

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD-- 339
             +T  G +++FG GS   LGHG+      PR +++    G+  + V+ G  H  A+   
Sbjct: 197 ALITSMGQLFTFGDGSFGVLGHGDLKSISCPREVESL--SGLKTIAVACGVWHTAAIVEV 254

Query: 340 ---------SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVL 390
                    S+G ++TWG G    LGHGD+  +  P  ++SL  +   +V      T  L
Sbjct: 255 IVTQSSATVSAGKLFTWGDGDKHRLGHGDKEARLKPTCVASLIDYDFYRVACGHSLTVGL 314

Query: 391 VDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRIL-DSLRAHHVSQISTGLYHTVVVTDRG 449
             +G V+  G   +G LG  +   SD   RP ++ D + + HV QI+ G YH  V+T R 
Sbjct: 315 TTSGKVWTMGNSVYGQLGNLN---SDG--RPCLVEDKIASEHVLQIACGSYHVAVLTSRS 369

Query: 450 RLFGFGDNERAQLGHDTLRGCLEPTEI 476
            +F +G     +LGH  +     PT +
Sbjct: 370 EVFTWGKGANGRLGHGDIEDRKVPTTV 396



 Score = 95.5 bits (236), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 81/274 (29%), Positives = 127/274 (46%), Gaps = 23/274 (8%)

Query: 116 ITTGRYHTLLISNSS---VFSCGSSLCGVLGHGPETTQCVSFTRINFP-SAAHVVQVSAS 171
           +  G +HT  ++ +     +  G+   G+LGHG +    +   RI+ P     +  VS  
Sbjct: 134 VACGEFHTCAVTTTGELYTWGDGTHNVGLLGHGTDVGHWIP-RRISGPLEGLQIAYVSCG 192

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
             H A +   GQ+FT GD S    GH D  + I  PR VE+L G+    V  G+  T  +
Sbjct: 193 TWHTALITSMGQLFTFGDGSFGVLGHGDL-KSISCPREVESLSGLKTIAVACGVWHTAAI 251

Query: 232 T-----------IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 280
                         G + T G     +LGHGD   R  P  +A L +     ++A G S 
Sbjct: 252 VEVIVTQSSATVSAGKLFTWGDGDKHRLGHGDKEARLKPTCVASLIDY-DFYRVACGHSL 310

Query: 281 MLAVTGNGVVYSFGSGSNFCLGH-GEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 339
            + +T +G V++ G   N   G  G  + + +P  ++  +    HV++++ G  HV  L 
Sbjct: 311 TVGLTTSGKVWTMG---NSVYGQLGNLNSDGRPCLVED-KIASEHVLQIACGSYHVAVLT 366

Query: 340 SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
           S   V+TWGKG  G LGHGD  D+ +P  + +L+
Sbjct: 367 SRSEVFTWGKGANGRLGHGDIEDRKVPTTVEALR 400



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 74/243 (30%), Positives = 117/243 (48%), Gaps = 25/243 (10%)

Query: 252 DTLDRPTPKS----IAPLEE--VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGE 305
           DT+ R T K+      PLE   V  V  +  G  +   VT NG V+++G  S   LGHG 
Sbjct: 54  DTVIRSTGKTDFLLPKPLESNLVLDVYHVDCGVRHASLVTRNGEVFTWGEDSGGRLGHGT 113

Query: 306 QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY--CGALGHGDEIDK 363
           + D + PR +++      ++  V+ G+ H  A+ ++G +YTWG G    G LGHG ++  
Sbjct: 114 REDSVHPRLVESL--AACNIDFVACGEFHTCAVTTTGELYTWGDGTHNVGLLGHGTDVGH 171

Query: 364 TLPEPLSSLKSHLAVQ-VCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPR 422
            +P  +S     L +  V      T ++   G ++ FG   FG LG  D      +  PR
Sbjct: 172 WIPRRISGPLEGLQIAYVSCGTWHTALITSMGQLFTFGDGSFGVLGHGDL---KSISCPR 228

Query: 423 ILDSLRAHHVSQISTGLYHT-----VVVTDR------GRLFGFGDNERAQLGHDTLRGCL 471
            ++SL       ++ G++HT     V+VT        G+LF +GD ++ +LGH      L
Sbjct: 229 EVESLSGLKTIAVACGVWHTAAIVEVIVTQSSATVSAGKLFTWGDGDKHRLGHGDKEARL 288

Query: 472 EPT 474
           +PT
Sbjct: 289 KPT 291



 Score = 84.0 bits (206), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 90/348 (25%), Positives = 148/348 (42%), Gaps = 39/348 (11%)

Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHVVQVSASE 172
           R+ +L+  N  VF+ G    G LGHG       P   + ++   I+F        V+  E
Sbjct: 87  RHASLVTRNGEVFTWGEDSGGRLGHGTREDSVHPRLVESLAACNIDF--------VACGE 138

Query: 173 NHAAFVLQSGQVFTCGDNSSFC--CGH-RDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
            H   V  +G+++T GD +      GH  D    I R R+   L+G+    V+ G   T 
Sbjct: 139 FHTCAVTTTGELYTWGDGTHNVGLLGHGTDVGHWIPR-RISGPLEGLQIAYVSCGTWHTA 197

Query: 230 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV----- 284
            +T  G + T G  + G LGHGD      P+ +  L  + ++  +A G  +  A+     
Sbjct: 198 LITSMGQLFTFGDGSFGVLGHGDLKSISCPREVESLSGLKTIA-VACGVWHTAAIVEVIV 256

Query: 285 ------TGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
                    G ++++G G    LGHG++   L+P  + +      +  RV+ G    V L
Sbjct: 257 TQSSATVSAGKLFTWGDGDKHRLGHGDKEARLKPTCVASLIDYDFY--RVACGHSLTVGL 314

Query: 339 DSSGYVYTWGKGYCGALGHGDEIDKT-LPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVY 397
            +SG V+T G    G LG+ +   +  L E    + S   +Q+        VL     V+
Sbjct: 315 TTSGKVWTMGNSVYGQLGNLNSDGRPCLVE--DKIASEHVLQIACGSYHVAVLTSRSEVF 372

Query: 398 GFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVV 445
            +G    G LG  D  + D+ + P  +++LR   V  I+ G   T  +
Sbjct: 373 TWGKGANGRLGHGD--IEDRKV-PTTVEALRDRAVRHIACGANFTAAI 417



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 77/271 (28%), Positives = 127/271 (46%), Gaps = 18/271 (6%)

Query: 207 PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 266
           P+ +E+   +    V  G+     +T  G V T G ++ G+LGHG   D   P+ +  L 
Sbjct: 68  PKPLESNLVLDVYHVDCGVRHASLVTRNGEVFTWGEDSGGRLGHGTREDSVHPRLVESLA 127

Query: 267 EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC--LGHGEQHDELQPRAIQTFRRKGIH 324
              ++  +A G  +  AVT  G +Y++G G++    LGHG       PR I +   +G+ 
Sbjct: 128 AC-NIDFVACGEFHTCAVTTTGELYTWGDGTHNVGLLGHGTDVGHWIPRRI-SGPLEGLQ 185

Query: 325 VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP---EPLSSLKS------- 374
           +  VS G  H   + S G ++T+G G  G LGHGD    + P   E LS LK+       
Sbjct: 186 IAYVSCGTWHTALITSMGQLFTFGDGSFGVLGHGDLKSISCPREVESLSGLKTIAVACGV 245

Query: 375 -HLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVS 433
            H A  V     ++   V  G ++ +G      LG  D+   +  L+P  + SL  +   
Sbjct: 246 WHTAAIVEVIVTQSSATVSAGKLFTWGDGDKHRLGHGDK---EARLKPTCVASLIDYDFY 302

Query: 434 QISTGLYHTVVVTDRGRLFGFGDNERAQLGH 464
           +++ G   TV +T  G+++  G++   QLG+
Sbjct: 303 RVACGHSLTVGLTTSGKVWTMGNSVYGQLGN 333



 Score = 75.9 bits (185), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 63/221 (28%), Positives = 105/221 (47%), Gaps = 18/221 (8%)

Query: 116 ITTGRYHTLLISN-SSVFSCGSSLCGVLGHG-------PETTQCVSFTRI-----NFPSA 162
           ++ G +HT LI++   +F+ G    GVLGHG       P   + +S  +           
Sbjct: 189 VSCGTWHTALITSMGQLFTFGDGSFGVLGHGDLKSISCPREVESLSGLKTIAVACGVWHT 248

Query: 163 AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 222
           A +V+V  +++ A   + +G++FT GD      GH D      +P  V +L      +V 
Sbjct: 249 AAIVEVIVTQSSA--TVSAGKLFTWGDGDKHRLGHGD-KEARLKPTCVASLIDYDFYRVA 305

Query: 223 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 282
            G + T  LT  G V T G++ +GQLG+ ++  RP         E   V+QIA G  ++ 
Sbjct: 306 CGHSLTVGLTTSGKVWTMGNSVYGQLGNLNSDGRPCLVEDKIASE--HVLQIACGSYHVA 363

Query: 283 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGI 323
            +T    V+++G G+N  LGHG+  D   P  ++  R + +
Sbjct: 364 VLTSRSEVFTWGKGANGRLGHGDIEDRKVPTTVEALRDRAV 404



 Score = 64.3 bits (155), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 48/155 (30%), Positives = 70/155 (45%), Gaps = 2/155 (1%)

Query: 323 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCA 382
           + V  V  G  H   +  +G V+TWG+   G LGHG   D   P  + SL +     V  
Sbjct: 77  LDVYHVDCGVRHASLVTRNGEVFTWGEDSGGRLGHGTREDSVHPRLVESLAACNIDFVAC 136

Query: 383 RKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPR-ILDSLRAHHVSQISTGLYH 441
            +  T  +  TG +Y +G  G  ++G    G       PR I   L    ++ +S G +H
Sbjct: 137 GEFHTCAVTTTGELYTWG-DGTHNVGLLGHGTDVGHWIPRRISGPLEGLQIAYVSCGTWH 195

Query: 442 TVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 476
           T ++T  G+LF FGD     LGH  L+    P E+
Sbjct: 196 TALITSMGQLFTFGDGSFGVLGHGDLKSISCPREV 230



 Score = 52.0 bits (123), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 46/149 (30%), Positives = 66/149 (44%), Gaps = 14/149 (9%)

Query: 339 DSSGYVYTWGKGYC--GALGHGDEI-------DKTLPEPLSSLKSHLAVQVCARKRKTFV 389
           DS G VY WG+  C   A    D +       D  LP+PL S        V    R   +
Sbjct: 32  DSLGDVYVWGEVVCDNSARTSSDTVIRSTGKTDFLLPKPLESNLVLDVYHVDCGVRHASL 91

Query: 390 LVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRG 449
           +   G V+ +G    G LG    G  +  + PR+++SL A ++  ++ G +HT  VT  G
Sbjct: 92  VTRNGEVFTWGEDSGGRLGH---GTREDSVHPRLVESLAACNIDFVACGEFHTCAVTTTG 148

Query: 450 RLFGFGD--NERAQLGHDTLRGCLEPTEI 476
            L+ +GD  +    LGH T  G   P  I
Sbjct: 149 ELYTWGDGTHNVGLLGHGTDVGHWIPRRI 177


>gi|260802292|ref|XP_002596026.1| hypothetical protein BRAFLDRAFT_113678 [Branchiostoma floridae]
 gi|229281280|gb|EEN52038.1| hypothetical protein BRAFLDRAFT_113678 [Branchiostoma floridae]
          Length = 1015

 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 86/262 (32%), Positives = 135/262 (51%), Gaps = 11/262 (4%)

Query: 219 KQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGP 278
           ++V+ G   T F+   G V+TCGSN +GQLG      RPT   +    +  S+ Q++ G 
Sbjct: 37  REVSCGRQHTVFVLAEGTVYTCGSNDYGQLGQDKGHKRPT---VITALDTQSIQQVSCGD 93

Query: 279 SYMLAVTGNGVVYSFGSGSNFCLGHGEQ---HDELQPRAIQTFRRKGIHVVRVSAGDEHV 335
            + L V     V+S+G      LGH  +   ++  +PR ++      + +V+V+ G +H 
Sbjct: 94  YHNLVVNDKYQVFSWGYDDCGQLGHTLEAGGNNSRRPRMVKEL--SSLQIVQVACGGKHS 151

Query: 336 VALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGS 395
           +AL + G +++WG    G LG G   ++  P+ L+SL      Q+ A    +FVL  +G+
Sbjct: 152 LALSNDGRIFSWGNNSHGQLGIGSTKNQPKPQELTSLTGIPFCQIVAGGSHSFVLSKSGA 211

Query: 396 VYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFG 455
           V+GFG   FG LG  D G  D+   P  + SLR+  V+ IS G  HT V+T  G +  FG
Sbjct: 212 VFGFGRNTFGQLGLGDTG--DRKY-PTHVKSLRSLKVTHISCGEEHTAVLTLDGGVLTFG 268

Query: 456 DNERAQLGHDTLRGCLEPTEIF 477
                QLGH++      P ++F
Sbjct: 269 AGSYGQLGHNSNNHEALPRKVF 290



 Score =  122 bits (305), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 102/354 (28%), Positives = 163/354 (46%), Gaps = 20/354 (5%)

Query: 131 VFSCGSSLCGVLG-HGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGD 189
           +F  G++  G LG  G E    ++     F +   + +VS    H  FVL  G V+TCG 
Sbjct: 1   MFCWGAARNGELGLGGIEEDVILAPKEQPFGATKAMREVSCGRQHTVFVLAEGTVYTCGS 60

Query: 190 NSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLG 249
           N     G    ++   RP ++ AL     +QV+ G      +  +  V + G +  GQLG
Sbjct: 61  NDYGQLGQDKGHK---RPTVITALDTQSIQQVSCGDYHNLVVNDKYQVFSWGYDDCGQLG 117

Query: 250 H-----GDTLDRP-TPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH 303
           H     G+   RP   K ++ L+    +VQ+A G  + LA++ +G ++S+G+ S+  LG 
Sbjct: 118 HTLEAGGNNSRRPRMVKELSSLQ----IVQVACGGKHSLALSNDGRIFSWGNNSHGQLGI 173

Query: 304 GEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK 363
           G   ++ +P+ + +    GI   ++ AG  H   L  SG V+ +G+   G LG GD  D+
Sbjct: 174 GSTKNQPKPQELTSL--TGIPFCQIVAGGSHSFVLSKSGAVFGFGRNTFGQLGLGDTGDR 231

Query: 364 TLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRI 423
             P  + SL+S     +   +  T VL   G V  FG   +G LG      ++    PR 
Sbjct: 232 KYPTHVKSLRSLKVTHISCGEEHTAVLTLDGGVLTFGAGSYGQLG---HNSNNHEALPRK 288

Query: 424 LDSLRAHHVSQISTGLYHTVV-VTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 476
           +  L    V+Q++ G  HT+  V   GR++ FG     QLG      C  P  +
Sbjct: 289 VFELMGLEVTQLACGRMHTMAYVESSGRIYSFGLGGNGQLGSKGTTNCNTPITV 342



 Score =  121 bits (303), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 91/301 (30%), Positives = 144/301 (47%), Gaps = 16/301 (5%)

Query: 115 QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
           +++ GR HT+ + +  +V++CGS+  G LG      +    T ++  S   + QVS  + 
Sbjct: 38  EVSCGRQHTVFVLAEGTVYTCGSNDYGQLGQDKGHKRPTVITALDTQS---IQQVSCGDY 94

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHR-----DTNRPIFRPRLVEALKGVPCKQVTAGLNFT 228
           H   V    QVF+ G +     GH      + +R   RPR+V+ L  +   QV  G   +
Sbjct: 95  HNLVVNDKYQVFSWGYDDCGQLGHTLEAGGNNSR---RPRMVKELSSLQIVQVACGGKHS 151

Query: 229 GFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG 288
             L+  G + + G+N+HGQLG G T ++P P+ +  L  +    QI AG S+   ++ +G
Sbjct: 152 LALSNDGRIFSWGNNSHGQLGIGSTKNQPKPQELTSLTGI-PFCQIVAGGSHSFVLSKSG 210

Query: 289 VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 348
            V+ FG  +   LG G+  D   P  +++ R   + V  +S G+EH   L   G V T+G
Sbjct: 211 AVFGFGRNTFGQLGLGDTGDRKYPTHVKSLR--SLKVTHISCGEEHTAVLTLDGGVLTFG 268

Query: 349 KGYCGALGHGDEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSL 407
            G  G LGH     + LP  +  L      Q+ C R      +  +G +Y FG  G G L
Sbjct: 269 AGSYGQLGHNSNNHEALPRKVFELMGLEVTQLACGRMHTMAYVESSGRIYSFGLGGNGQL 328

Query: 408 G 408
           G
Sbjct: 329 G 329



 Score = 48.5 bits (114), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 54/183 (29%), Positives = 78/183 (42%), Gaps = 15/183 (8%)

Query: 115 QITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
           QI  G  H+ ++S S +VF  G +  G LG G +T      T +    +  V  +S  E 
Sbjct: 195 QIVAGGSHSFVLSKSGAVFGFGRNTFGQLGLG-DTGDRKYPTHVKSLRSLKVTHISCGEE 253

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG-LNFTGFLT 232
           H A +   G V T G  S    GH   N     PR V  L G+   Q+  G ++   ++ 
Sbjct: 254 HTAVLTLDGGVLTFGAGSYGQLGHNSNNHEAL-PRKVFELMGLEVTQLACGRMHTMAYVE 312

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSI----------APLEEVGSVVQ-IAAGPSYM 281
             G +++ G   +GQLG   T +  TP ++            LEE   VVQ I AG    
Sbjct: 313 SSGRIYSFGLGGNGQLGSKGTTNCNTPITVDGPFVPFAGDNSLEEQCYVVQAITAGGDQA 372

Query: 282 LAV 284
            A+
Sbjct: 373 FAL 375


>gi|329928889|ref|ZP_08282703.1| regulator of chromosome condensation (RCC1) repeat protein
           [Paenibacillus sp. HGF5]
 gi|328937260|gb|EGG33685.1| regulator of chromosome condensation (RCC1) repeat protein
           [Paenibacillus sp. HGF5]
          Length = 719

 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 109/377 (28%), Positives = 172/377 (45%), Gaps = 25/377 (6%)

Query: 115 QITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
           ++  G YHT  L+S+  V+S G    G LG G   T+       N     HV+ + +   
Sbjct: 37  KLVAGYYHTASLVSSGEVYSWGYGDRGQLGDGTWNTRTTPVMAKNLN---HVIDIHSGVR 93

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF-LT 232
            +  + Q G V+T G N +   G   T   +  P  V  L G+  K ++ GL + G  L+
Sbjct: 94  SSMALRQDGTVWTWGANENGQLG-IGTITNVNAPAQVPGLSGI--KAISGGLAYHGMALS 150

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
             G V T G N +G+LG+G T  + +P  +A L +V     IAAG  Y LA+  +G V++
Sbjct: 151 ENGTVWTWGKNDNGELGNGTTTQQNSPVLVAGLSDV---TAIAAGGYYSLALKSDGTVWA 207

Query: 293 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 352
           +G   +  LG G   +   P  +         V+ ++AG  H +A+   G V+ WG    
Sbjct: 208 WGVNGSGELGDGTTTERHVPVQVAGL----TDVMAIAAGGSHSLAIRQDGTVWAWGNNTY 263

Query: 353 GALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDR 412
           G LG G    +T P  + +L+ H+ V V      +  +   G+V+ +G      LG    
Sbjct: 264 GTLGDGTRTHRTRPVQVRNLQ-HI-VAVAGGGYHSLAVDQAGNVWSWGDNSQQQLGLSSN 321

Query: 413 GVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG---HDTLRG 469
             S   L P  +  +   HV +IS G +H+V +   G ++G+G N   QLG   ++  RG
Sbjct: 322 ASS---LIPVPVTGIE--HVREISAGGFHSVAMKKDGTVWGWGYNSGGQLGDGTYNNTRG 376

Query: 470 CLEPTEIFIQEMEEDTG 486
               T+  +     DTG
Sbjct: 377 IPTLTKAVLDTTSPDTG 393


>gi|296486676|tpg|DAA28789.1| TPA: hect domain and RLD 6-like isoform 2 [Bos taurus]
          Length = 1016

 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 92/275 (33%), Positives = 135/275 (49%), Gaps = 7/275 (2%)

Query: 193 FCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGD 252
           + C      RP+ R R V A  G    Q  +G + +  L   G V +CG N+ GQLG   
Sbjct: 2   YFCWRAGGRRPL-RERQVCA-GGNTLLQAASGEHHSLLLLSDGTVQSCGDNSRGQLGRKG 59

Query: 253 TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGE-QHDELQ 311
           T     P+ I  LE + +V  ++ G  + LAV   G V+++G+ S   LG GE +     
Sbjct: 60  TPRGEQPERIPALETL-NVALVSCGKEHSLAVCHKGRVFAWGAASEGQLGIGEFKETTFI 118

Query: 312 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEI-DKTLPEPLS 370
           P+ I+T    GI +++V+ G  H VAL   G V++WG    G LG G E   +  P+ + 
Sbjct: 119 PKKIKTL--AGIKIIQVACGHYHSVALSEDGQVFSWGTNSHGQLGLGKEFPSQASPQRVR 176

Query: 371 SLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAH 430
           SL+     QV A    +F L  +G+ +G+G    G L         +  +P  + +L+  
Sbjct: 177 SLEGIPLAQVAAGGHHSFALSLSGTSFGWGSNSAGQLALSGNNAPVQRYKPVSIGALKTL 236

Query: 431 HVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHD 465
            V  IS G  HT V+T  G++F FGDN   QLGHD
Sbjct: 237 GVVSISCGYKHTAVLTQDGKVFTFGDNSYGQLGHD 271



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 84/297 (28%), Positives = 151/297 (50%), Gaps = 14/297 (4%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           ++Q ++ E+H+  +L  G V +CGDNS    G + T R   +P  + AL+ +    V+ G
Sbjct: 25  LLQAASGEHHSLLLLSDGTVQSCGDNSRGQLGRKGTPRGE-QPERIPALETLNVALVSCG 83

Query: 225 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRP-TPKSIAPLEEVGSVVQIAAGPSYMLA 283
              +  +  +G V   G+ + GQLG G+  +    PK I  L  +  ++Q+A G  + +A
Sbjct: 84  KEHSLAVCHKGRVFAWGAASEGQLGIGEFKETTFIPKKIKTLAGI-KIIQVACGHYHSVA 142

Query: 284 VTGNGVVYSFGSGSNFCLGHGEQH-DELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
           ++ +G V+S+G+ S+  LG G++   +  P+ +++   +GI + +V+AG  H  AL  SG
Sbjct: 143 LSEDGQVFSWGTNSHGQLGLGKEFPSQASPQRVRSL--EGIPLAQVAAGGHHSFALSLSG 200

Query: 343 YVYTWGKGYCGAL---GHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGF 399
             + WG    G L   G+   + +  P  + +LK+   V +    + T VL   G V+ F
Sbjct: 201 TSFGWGSNSAGQLALSGNNAPVQRYKPVSIGALKTLGVVSISCGYKHTAVLTQDGKVFTF 260

Query: 400 GWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV-VTDRGRLFGFG 455
           G   +G LG      + +   P++++ +    VSQI  G  HT+  +   G++  FG
Sbjct: 261 GDNSYGQLG---HDPTAEKRGPQLVERIEG-LVSQIDCGSDHTLAYIYTTGQVVSFG 313



 Score = 98.2 bits (243), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 85/294 (28%), Positives = 136/294 (46%), Gaps = 13/294 (4%)

Query: 114 MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHG--PETTQCVSFTRINFPSAAHVVQVSA 170
           +Q  +G +H+LL+ S+ +V SCG +  G LG    P   Q     RI      +V  VS 
Sbjct: 26  LQAASGEHHSLLLLSDGTVQSCGDNSRGQLGRKGTPRGEQP---ERIPALETLNVALVSC 82

Query: 171 SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
            + H+  V   G+VF  G  S    G  +     F P+ ++ L G+   QV  G   +  
Sbjct: 83  GKEHSLAVCHKGRVFAWGAASEGQLGIGEFKETTFIPKKIKTLAGIKIIQVACGHYHSVA 142

Query: 231 LTIRGHVHTCGSNTHGQLGHGDTL-DRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 289
           L+  G V + G+N+HGQLG G     + +P+ +  LE +  + Q+AAG  +  A++ +G 
Sbjct: 143 LSEDGQVFSWGTNSHGQLGLGKEFPSQASPQRVRSLEGI-PLAQVAAGGHHSFALSLSGT 201

Query: 290 VYSFGSGSNFCL---GHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYT 346
            + +GS S   L   G+       +P +I   +  G  VV +S G +H   L   G V+T
Sbjct: 202 SFGWGSNSAGQLALSGNNAPVQRYKPVSIGALKTLG--VVSISCGYKHTAVLTQDGKVFT 259

Query: 347 WGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 400
           +G    G LGH    +K  P+ +  ++  ++   C        +  TG V  FG
Sbjct: 260 FGDNSYGQLGHDPTAEKRGPQLVERIEGLVSQIDCGSDHTLAYIYTTGQVVSFG 313


>gi|301610125|ref|XP_002934599.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Xenopus
            (Silurana) tropicalis]
          Length = 4842

 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 99/337 (29%), Positives = 166/337 (49%), Gaps = 13/337 (3%)

Query: 115  QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQV---SA 170
            Q+  G+  T +I +N +V +CG    G LG G      V  T I+      V Q+     
Sbjct: 4012 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHV-LTVISALQGFVVTQLVTSCG 4070

Query: 171  SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
            S+ H+  + +SG+VF+ GD      GH +++R   RPR +EAL+G    Q++ G   +  
Sbjct: 4071 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQMSCGFKHSAV 4129

Query: 231  LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG-V 289
            +T  G + T G+  +G+LG G+T ++  P+ +  LE +  + Q+A G ++ LAV+ +G +
Sbjct: 4130 VTADGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGL-HIGQVACGLNHTLAVSADGSL 4188

Query: 290  VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 349
            V++FG G    LG G    +  P+ +      GI + +V+ G +  VAL   G+VYT+G+
Sbjct: 4189 VWAFGDGDYGKLGLGNSTAKSSPQKVDVL--CGIGIKKVACGTQFSVALTKDGHVYTFGQ 4246

Query: 350  GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGF 409
                 L  G   +   P+ +  L       +      T  L  +G VY +G    G LG 
Sbjct: 4247 DRLIGLPEGRARNHNRPQLVPVLLGIFIDDIAVGAEHTLALSASGEVYAWGSNSEGQLGL 4306

Query: 410  PDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT 446
               G ++ V  P ++ +L+  ++ QIS G  H+   T
Sbjct: 4307 ---GHTNHVREPTLVTALQGKNIRQISAGRCHSAAWT 4340



 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 96/337 (28%), Positives = 160/337 (47%), Gaps = 16/337 (4%)

Query: 116 ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSAS--- 171
           I  G+Y T +IS + SV +CG    G LG G    Q  +  ++ F     + +VS+S   
Sbjct: 408 IEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQS-TLKKLTFEPHRSIKKVSSSKGS 466

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVE-ALKGVPCKQVTAGLNFTGF 230
           + H       G+VF+ GD      GH +++   + P+L++  L+G     V+AG   +  
Sbjct: 467 DGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKY-PKLIQGTLQGKVVVCVSAGYRHSAA 525

Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG-V 289
           +T  G ++T G    G+LGHGD+  R  P  +  +  VG   +++ G S+ +A++ +G  
Sbjct: 526 VTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG---EVSCGSSHTIALSKDGRT 582

Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 349
           V+SFG G N  LGHG+ +   +P+ ++    +G+   +V AG +  +AL S+G VY WG 
Sbjct: 583 VWSFGGGDNGKLGHGDTNRVYKPKVVEAL--QGMFTRKVCAGSQSSLALTSTGQVYAWGC 640

Query: 350 GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGF 409
           G C   G   E     P+ +  L +   V +         L     VY +G    G  G 
Sbjct: 641 GACLGCG-SSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCG- 698

Query: 410 PDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT 446
                +  + +P+ +  L    + QIS G  H++  T
Sbjct: 699 -QGNSTGPITKPKKVSGLDGVAIQQISAGTSHSLAWT 734



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 90/303 (29%), Positives = 142/303 (46%), Gaps = 26/303 (8%)

Query: 173 NHAAFVLQS-GQVFTCGDNSSFCCGHRDTN------RPIFRPRLVEALKGVPCKQVTAGL 225
            +  FV+ + G V  CG  S    G  D+N      +  F P    ++K V   + + G 
Sbjct: 412 QYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPH--RSIKKVSSSKGSDG- 468

Query: 226 NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 285
             T   T  G V + G   +G+LGHG++  +  PK I    +   VV ++AG  +  AVT
Sbjct: 469 -HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGTLQGKVVVCVSAGYRHSAAVT 527

Query: 286 GNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY-V 344
            +G +Y++G G    LGHG+ +     R I T  +   +V  VS G  H +AL   G  V
Sbjct: 528 EDGELYTWGEGDFGRLGHGDSNS----RNIPTLVKDISNVGEVSCGSSHTIALSKDGRTV 583

Query: 345 YTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG---W 401
           +++G G  G LGHGD      P+ + +L+     +VCA  + +  L  TG VY +G    
Sbjct: 584 WSFGGGDNGKLGHGDTNRVYKPKVVEALQGMFTRKVCAGSQSSLALTSTGQVYAWGCGAC 643

Query: 402 MGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQ 461
           +G GS            LRP++++ L A  +  IS G  H + ++    ++ +G+N   Q
Sbjct: 644 LGCGS-------SEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQ 696

Query: 462 LGH 464
            G 
Sbjct: 697 CGQ 699



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 90/327 (27%), Positives = 153/327 (46%), Gaps = 17/327 (5%)

Query: 157  INFPSAA----HVVQVSASENHAAFVLQS-GQVFTCGDNSSFCCGHRDTNRPIFRPRLVE 211
            +  PS A       QV   +N   FV+Q+ G V  CG+ S    G  +++  +    ++ 
Sbjct: 3998 VMIPSGAGSFSQAQQVICGQN-CTFVIQANGTVLACGEGSYGRLGQGNSDD-LHVLTVIS 4055

Query: 212  ALKGVPCKQVTAGLNFTGF---LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEV 268
            AL+G    Q+       G    LT  G V + G   +G+LGHG++  +  P+ I  L+  
Sbjct: 4056 ALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQG- 4114

Query: 269  GSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRV 328
              VVQ++ G  +   VT +G +++FG+G    LG G   ++  P  +     +G+H+ +V
Sbjct: 4115 EEVVQMSCGFKHSAVVTADGKLFTFGNGDYGRLGLGNTSNKKLPERVTAL--EGLHIGQV 4172

Query: 329  SAGDEHVVALDSSG-YVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKT 387
            + G  H +A+ + G  V+ +G G  G LG G+   K+ P+ +  L      +V    + +
Sbjct: 4173 ACGLNHTLAVSADGSLVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFS 4232

Query: 388  FVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTD 447
              L   G VY FG      +G P+ G +    RP+++  L    +  I+ G  HT+ ++ 
Sbjct: 4233 VALTKDGHVYTFGQDRL--IGLPE-GRARNHNRPQLVPVLLGIFIDDIAVGAEHTLALSA 4289

Query: 448  RGRLFGFGDNERAQLGHDTLRGCLEPT 474
             G ++ +G N   QLG        EPT
Sbjct: 4290 SGEVYAWGSNSEGQLGLGHTNHVREPT 4316



 Score = 59.7 bits (143), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 49/180 (27%), Positives = 82/180 (45%), Gaps = 13/180 (7%)

Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 349
           VY +GS S+  L  G Q   LQP+    F         + AG      + + G V   GK
Sbjct: 374 VYVWGSNSSHQLVEGTQEKILQPKLAPCFS----DAQTIEAGQYCTFVISTDGSVRACGK 429

Query: 350 GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKR----KTFVLVDTGSVYGFGWMGFG 405
           G  G LG GD  +++  + L + + H +++  +  +     T      G V+ +G   +G
Sbjct: 430 GSYGRLGLGDSNNQSTLKKL-TFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYG 488

Query: 406 SLGFPDRGVSDKVLRPRILD-SLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 464
            LG    G S     P+++  +L+   V  +S G  H+  VT+ G L+ +G+ +  +LGH
Sbjct: 489 KLG---HGNSSTQKYPKLIQGTLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGH 545



 Score = 45.1 bits (105), Expect = 0.079,   Method: Compositional matrix adjust.
 Identities = 40/143 (27%), Positives = 66/143 (46%), Gaps = 9/143 (6%)

Query: 344  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 403
            V+ WG G  G L    E  + +  P  +     A QV   +  TFV+   G+V   G   
Sbjct: 3980 VFLWGAGRHGQLA---EAGRNVMIPSGAGSFSQAQQVICGQNCTFVIQANGTVLACGEGS 4036

Query: 404  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLY---HTVVVTDRGRLFGFGDNERA 460
            +G LG   +G SD +    ++ +L+   V+Q+ T      H++ +T+ G +F +GD +  
Sbjct: 4037 YGRLG---QGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYG 4093

Query: 461  QLGHDTLRGCLEPTEIFIQEMEE 483
            +LGH        P +I   + EE
Sbjct: 4094 KLGHGNSDRQRRPRQIEALQGEE 4116


>gi|15088545|gb|AAK84081.1|AF326781_2 putative chromosome condensation factor [Triticum monococcum]
          Length = 907

 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 102/327 (31%), Positives = 156/327 (47%), Gaps = 24/327 (7%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V  V     HA+ V ++G+VFT G++S    GH  T      PRLVE+L       V  G
Sbjct: 79  VYHVDCGVRHASLVTRNGEVFTWGEDSGGRLGH-GTREDSVHPRLVESLAACNIDFVACG 137

Query: 225 LNFTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSYM 281
              T  +T  G ++T G  TH  G LGHG  +    P+ I+ PLE +  +  ++ G  + 
Sbjct: 138 EFHTCAVTTTGELYTWGDGTHNVGLLGHGTDVGHWIPRRISGPLEGL-QIAYVSCGTWHT 196

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD-- 339
             +T  G +++FG GS   LGHG+      PR +++    G+  + V+ G  H  A+   
Sbjct: 197 ALITSMGQLFTFGDGSFGVLGHGDLKSISCPREVESL--SGLKTIAVACGVWHTAAIVEV 254

Query: 340 ---------SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVL 390
                    S+G ++TWG G    LGHGD+  +  P  ++SL  +   +V      T  L
Sbjct: 255 IVTQSSATVSAGKLFTWGDGDKHRLGHGDKEARLKPTCVASLIDYDFYRVACGHSLTVGL 314

Query: 391 VDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRIL-DSLRAHHVSQISTGLYHTVVVTDRG 449
             +G V+  G   +G LG  +   SD   RP ++ D + + HV QI+ G YH  V+T R 
Sbjct: 315 TTSGKVWTMGNSVYGQLGNLN---SDG--RPCLVEDKIASEHVLQIACGSYHVAVLTSRS 369

Query: 450 RLFGFGDNERAQLGHDTLRGCLEPTEI 476
            +F +G     +LGH  +     PT +
Sbjct: 370 EVFTWGKGANGRLGHGDIEDRKVPTTV 396



 Score = 95.5 bits (236), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 81/274 (29%), Positives = 127/274 (46%), Gaps = 23/274 (8%)

Query: 116 ITTGRYHTLLISNSS---VFSCGSSLCGVLGHGPETTQCVSFTRINFP-SAAHVVQVSAS 171
           +  G +HT  ++ +     +  G+   G+LGHG +    +   RI+ P     +  VS  
Sbjct: 134 VACGEFHTCAVTTTGELYTWGDGTHNVGLLGHGTDVGHWIP-RRISGPLEGLQIAYVSCG 192

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
             H A +   GQ+FT GD S    GH D  + I  PR VE+L G+    V  G+  T  +
Sbjct: 193 TWHTALITSMGQLFTFGDGSFGVLGHGDL-KSISCPREVESLSGLKTIAVACGVWHTAAI 251

Query: 232 T-----------IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 280
                         G + T G     +LGHGD   R  P  +A L +     ++A G S 
Sbjct: 252 VEVIVTQSSATVSAGKLFTWGDGDKHRLGHGDKEARLKPTCVASLIDY-DFYRVACGHSL 310

Query: 281 MLAVTGNGVVYSFGSGSNFCLGH-GEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 339
            + +T +G V++ G   N   G  G  + + +P  ++  +    HV++++ G  HV  L 
Sbjct: 311 TVGLTTSGKVWTMG---NSVYGQLGNLNSDGRPCLVED-KIASEHVLQIACGSYHVAVLT 366

Query: 340 SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
           S   V+TWGKG  G LGHGD  D+ +P  + +L+
Sbjct: 367 SRSEVFTWGKGANGRLGHGDIEDRKVPTTVEALR 400



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 74/243 (30%), Positives = 117/243 (48%), Gaps = 25/243 (10%)

Query: 252 DTLDRPTPKS----IAPLEE--VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGE 305
           DT+ R T K+      PLE   V  V  +  G  +   VT NG V+++G  S   LGHG 
Sbjct: 54  DTVIRSTGKTDFLLPKPLESNLVLDVYHVDCGVRHASLVTRNGEVFTWGEDSGGRLGHGT 113

Query: 306 QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY--CGALGHGDEIDK 363
           + D + PR +++      ++  V+ G+ H  A+ ++G +YTWG G    G LGHG ++  
Sbjct: 114 REDSVHPRLVESL--AACNIDFVACGEFHTCAVTTTGELYTWGDGTHNVGLLGHGTDVGH 171

Query: 364 TLPEPLSSLKSHLAVQ-VCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPR 422
            +P  +S     L +  V      T ++   G ++ FG   FG LG  D      +  PR
Sbjct: 172 WIPRRISGPLEGLQIAYVSCGTWHTALITSMGQLFTFGDGSFGVLGHGDL---KSISCPR 228

Query: 423 ILDSLRAHHVSQISTGLYHT-----VVVTDR------GRLFGFGDNERAQLGHDTLRGCL 471
            ++SL       ++ G++HT     V+VT        G+LF +GD ++ +LGH      L
Sbjct: 229 EVESLSGLKTIAVACGVWHTAAIVEVIVTQSSATVSAGKLFTWGDGDKHRLGHGDKEARL 288

Query: 472 EPT 474
           +PT
Sbjct: 289 KPT 291



 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 90/348 (25%), Positives = 148/348 (42%), Gaps = 39/348 (11%)

Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHVVQVSASE 172
           R+ +L+  N  VF+ G    G LGHG       P   + ++   I+F        V+  E
Sbjct: 87  RHASLVTRNGEVFTWGEDSGGRLGHGTREDSVHPRLVESLAACNIDF--------VACGE 138

Query: 173 NHAAFVLQSGQVFTCGDNSSFC--CGH-RDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
            H   V  +G+++T GD +      GH  D    I R R+   L+G+    V+ G   T 
Sbjct: 139 FHTCAVTTTGELYTWGDGTHNVGLLGHGTDVGHWIPR-RISGPLEGLQIAYVSCGTWHTA 197

Query: 230 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV----- 284
            +T  G + T G  + G LGHGD      P+ +  L  + ++  +A G  +  A+     
Sbjct: 198 LITSMGQLFTFGDGSFGVLGHGDLKSISCPREVESLSGLKTIA-VACGVWHTAAIVEVIV 256

Query: 285 ------TGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
                    G ++++G G    LGHG++   L+P  + +      +  RV+ G    V L
Sbjct: 257 TQSSATVSAGKLFTWGDGDKHRLGHGDKEARLKPTCVASLIDYDFY--RVACGHSLTVGL 314

Query: 339 DSSGYVYTWGKGYCGALGHGDEIDKT-LPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVY 397
            +SG V+T G    G LG+ +   +  L E    + S   +Q+        VL     V+
Sbjct: 315 TTSGKVWTMGNSVYGQLGNLNSDGRPCLVE--DKIASEHVLQIACGSYHVAVLTSRSEVF 372

Query: 398 GFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVV 445
            +G    G LG  D  + D+ + P  +++LR   V  I+ G   T  +
Sbjct: 373 TWGKGANGRLGHGD--IEDRKV-PTTVEALRDRAVRHIACGANFTAAI 417



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 77/271 (28%), Positives = 127/271 (46%), Gaps = 18/271 (6%)

Query: 207 PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 266
           P+ +E+   +    V  G+     +T  G V T G ++ G+LGHG   D   P+ +  L 
Sbjct: 68  PKPLESNLVLDVYHVDCGVRHASLVTRNGEVFTWGEDSGGRLGHGTREDSVHPRLVESLA 127

Query: 267 EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC--LGHGEQHDELQPRAIQTFRRKGIH 324
              ++  +A G  +  AVT  G +Y++G G++    LGHG       PR I +   +G+ 
Sbjct: 128 AC-NIDFVACGEFHTCAVTTTGELYTWGDGTHNVGLLGHGTDVGHWIPRRI-SGPLEGLQ 185

Query: 325 VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP---EPLSSLKS------- 374
           +  VS G  H   + S G ++T+G G  G LGHGD    + P   E LS LK+       
Sbjct: 186 IAYVSCGTWHTALITSMGQLFTFGDGSFGVLGHGDLKSISCPREVESLSGLKTIAVACGV 245

Query: 375 -HLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVS 433
            H A  V     ++   V  G ++ +G      LG  D+   +  L+P  + SL  +   
Sbjct: 246 WHTAAIVEVIVTQSSATVSAGKLFTWGDGDKHRLGHGDK---EARLKPTCVASLIDYDFY 302

Query: 434 QISTGLYHTVVVTDRGRLFGFGDNERAQLGH 464
           +++ G   TV +T  G+++  G++   QLG+
Sbjct: 303 RVACGHSLTVGLTTSGKVWTMGNSVYGQLGN 333



 Score = 75.5 bits (184), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 63/221 (28%), Positives = 105/221 (47%), Gaps = 18/221 (8%)

Query: 116 ITTGRYHTLLISN-SSVFSCGSSLCGVLGHG-------PETTQCVSFTRI-----NFPSA 162
           ++ G +HT LI++   +F+ G    GVLGHG       P   + +S  +           
Sbjct: 189 VSCGTWHTALITSMGQLFTFGDGSFGVLGHGDLKSISCPREVESLSGLKTIAVACGVWHT 248

Query: 163 AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 222
           A +V+V  +++ A   + +G++FT GD      GH D      +P  V +L      +V 
Sbjct: 249 AAIVEVIVTQSSA--TVSAGKLFTWGDGDKHRLGHGD-KEARLKPTCVASLIDYDFYRVA 305

Query: 223 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 282
            G + T  LT  G V T G++ +GQLG+ ++  RP         E   V+QIA G  ++ 
Sbjct: 306 CGHSLTVGLTTSGKVWTMGNSVYGQLGNLNSDGRPCLVEDKIASE--HVLQIACGSYHVA 363

Query: 283 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGI 323
            +T    V+++G G+N  LGHG+  D   P  ++  R + +
Sbjct: 364 VLTSRSEVFTWGKGANGRLGHGDIEDRKVPTTVEALRDRAV 404



 Score = 64.3 bits (155), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 48/155 (30%), Positives = 70/155 (45%), Gaps = 2/155 (1%)

Query: 323 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCA 382
           + V  V  G  H   +  +G V+TWG+   G LGHG   D   P  + SL +     V  
Sbjct: 77  LDVYHVDCGVRHASLVTRNGEVFTWGEDSGGRLGHGTREDSVHPRLVESLAACNIDFVAC 136

Query: 383 RKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPR-ILDSLRAHHVSQISTGLYH 441
            +  T  +  TG +Y +G  G  ++G    G       PR I   L    ++ +S G +H
Sbjct: 137 GEFHTCAVTTTGELYTWG-DGTHNVGLLGHGTDVGHWIPRRISGPLEGLQIAYVSCGTWH 195

Query: 442 TVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 476
           T ++T  G+LF FGD     LGH  L+    P E+
Sbjct: 196 TALITSMGQLFTFGDGSFGVLGHGDLKSISCPREV 230



 Score = 52.0 bits (123), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 46/149 (30%), Positives = 66/149 (44%), Gaps = 14/149 (9%)

Query: 339 DSSGYVYTWGKGYC--GALGHGDEI-------DKTLPEPLSSLKSHLAVQVCARKRKTFV 389
           DS G VY WG+  C   A    D +       D  LP+PL S        V    R   +
Sbjct: 32  DSLGDVYVWGEVVCDNSARTSSDTVIRSTGKTDFLLPKPLESNLVLDVYHVDCGVRHASL 91

Query: 390 LVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRG 449
           +   G V+ +G    G LG    G  +  + PR+++SL A ++  ++ G +HT  VT  G
Sbjct: 92  VTRNGEVFTWGEDSGGRLGH---GTREDSVHPRLVESLAACNIDFVACGEFHTCAVTTTG 148

Query: 450 RLFGFGD--NERAQLGHDTLRGCLEPTEI 476
            L+ +GD  +    LGH T  G   P  I
Sbjct: 149 ELYTWGDGTHNVGLLGHGTDVGHWIPRRI 177


>gi|242074110|ref|XP_002446991.1| hypothetical protein SORBIDRAFT_06g026493 [Sorghum bicolor]
 gi|241938174|gb|EES11319.1| hypothetical protein SORBIDRAFT_06g026493 [Sorghum bicolor]
          Length = 1024

 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 96/311 (30%), Positives = 151/311 (48%), Gaps = 20/311 (6%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V  ++  E HAA + + G+V++ G+ SS   G++  N  + RP+LVE++  +  K V  G
Sbjct: 263 VQSIACGETHAAIITKQGEVYSWGNESSGGIGNQ-VNIKVSRPKLVESVASLHVKAVAYG 321

Query: 225 LNFTGFLTIRGHVHTCGSNTH-GQLG-HGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 282
                 +T+ G +   G   H GQL  + + L  P  K  +PL+ + SVV+IA GP +  
Sbjct: 322 SKHACAVTVSGELFEWGEGPHMGQLDCYANNLWFPH-KLFSPLDGI-SVVKIACGPWHTA 379

Query: 283 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL---- 338
            +T +G +Y++G G+   LGHG+     +P+ ++    KG  V  V+ G  H  A+    
Sbjct: 380 IITSSGQLYTYGDGTFGVLGHGDTQGTTRPKEVEYL--KGSRVKCVACGPWHTAAIVEVL 437

Query: 339 ------DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVD 392
                      ++TWG    G LGH D+  K +P  + SL  +  +QV      T VL  
Sbjct: 438 SDFKSNSPRSKLFTWGDADRGKLGHADKKMKLIPTCVDSLTDYDFIQVSCGMALTVVLSI 497

Query: 393 TGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLF 452
           TG V+  G    G LG P    +D      +   L+   V  IS+G  H  V+T  G++F
Sbjct: 498 TGVVFTIGSSMHGQLGNPH---ADGRTVCAVEGLLKTEFVRHISSGSSHVAVLTTNGKVF 554

Query: 453 GFGDNERAQLG 463
            +G  +  QLG
Sbjct: 555 TWGKGKEGQLG 565



 Score = 89.7 bits (221), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 78/288 (27%), Positives = 131/288 (45%), Gaps = 25/288 (8%)

Query: 107 VETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVL---GHGPETTQCVSF-TRINFP-- 160
           ++ S   +  +    H   ++  S  +C  ++ G L   G GP   Q   +   + FP  
Sbjct: 299 IKVSRPKLVESVASLHVKAVAYGSKHACAVTVSGELFEWGEGPHMGQLDCYANNLWFPHK 358

Query: 161 -----SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 215
                    VV+++    H A +  SGQ++T GD +    GH DT +   RP+ VE LKG
Sbjct: 359 LFSPLDGISVVKIACGPWHTAIITSSGQLYTYGDGTFGVLGHGDT-QGTTRPKEVEYLKG 417

Query: 216 VPCKQVTAGLNFTGFL----------TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL 265
              K V  G   T  +          + R  + T G    G+LGH D   +  P  +  L
Sbjct: 418 SRVKCVACGPWHTAAIVEVLSDFKSNSPRSKLFTWGDADRGKLGHADKKMKLIPTCVDSL 477

Query: 266 EEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHV 325
            +    +Q++ G +  + ++  GVV++ GS  +  LG+    D     A++   +    V
Sbjct: 478 TDY-DFIQVSCGMALTVVLSITGVVFTIGSSMHGQLGN-PHADGRTVCAVEGLLKTEF-V 534

Query: 326 VRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
             +S+G  HV  L ++G V+TWGKG  G LG GD ++++ P  + +L+
Sbjct: 535 RHISSGSSHVAVLTTNGKVFTWGKGKEGQLGLGDYLNRSTPTLVDALE 582



 Score = 89.7 bits (221), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 80/293 (27%), Positives = 134/293 (45%), Gaps = 21/293 (7%)

Query: 184 VFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 243
           VF  GD       + DT++ +  P LV++   +  + +  G      +T +G V++ G+ 
Sbjct: 231 VFFWGDAFGSILDYDDTSKSL--PMLVDSTNMLDVQSIACGETHAAIITKQGEVYSWGNE 288

Query: 244 THGQLGHGDTLDRPTPKSIAPLEEVGS--VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCL 301
           + G +G+   +    PK +   E V S  V  +A G  +  AVT +G ++ +G G +   
Sbjct: 289 SSGGIGNQVNIKVSRPKLV---ESVASLHVKAVAYGSKHACAVTVSGELFEWGEGPHMGQ 345

Query: 302 GHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEI 361
                ++   P  + +    GI VV+++ G  H   + SSG +YT+G G  G LGHGD  
Sbjct: 346 LDCYANNLWFPHKLFS-PLDGISVVKIACGPWHTAIITSSGQLYTYGDGTFGVLGHGDTQ 404

Query: 362 DKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGS----------VYGFGWMGFGSLGFPD 411
             T P+ +  LK      V      T  +V+  S          ++ +G    G LG  D
Sbjct: 405 GTTRPKEVEYLKGSRVKCVACGPWHTAAIVEVLSDFKSNSPRSKLFTWGDADRGKLGHAD 464

Query: 412 RGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 464
           + +    L P  +DSL  +   Q+S G+  TVV++  G +F  G +   QLG+
Sbjct: 465 KKMK---LIPTCVDSLTDYDFIQVSCGMALTVVLSITGVVFTIGSSMHGQLGN 514



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 92/345 (26%), Positives = 144/345 (41%), Gaps = 26/345 (7%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSASEN 173
           I  G  H  +I+    V+S G+   G  G G +    VS  + +   ++ HV  V+    
Sbjct: 266 IACGETHAAIITKQGEVYSWGNESSG--GIGNQVNIKVSRPKLVESVASLHVKAVAYGSK 323

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRD--TNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
           HA  V  SG++F  G+      G  D   N   F  +L   L G+   ++  G   T  +
Sbjct: 324 HACAVTVSGELFEWGEGPHM--GQLDCYANNLWFPHKLFSPLDGISVVKIACGPWHTAII 381

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ-IAAGPSYMLAV------ 284
           T  G ++T G  T G LGHGDT     PK +  L+  GS V+ +A GP +  A+      
Sbjct: 382 TSSGQLYTYGDGTFGVLGHGDTQGTTRPKEVEYLK--GSRVKCVACGPWHTAAIVEVLSD 439

Query: 285 ----TGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 340
               +    ++++G      LGH ++  +L P  + +        ++VS G    V L  
Sbjct: 440 FKSNSPRSKLFTWGDADRGKLGHADKKMKLIPTCVDSL--TDYDFIQVSCGMALTVVLSI 497

Query: 341 SGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 400
           +G V+T G    G LG+     +T+      LK+     + +      VL   G V+ +G
Sbjct: 498 TGVVFTIGSSMHGQLGNPHADGRTVCAVEGLLKTEFVRHISSGSSHVAVLTTNGKVFTWG 557

Query: 401 WMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVV 445
               G LG  D         P ++D+L    V  IS G  +T  V
Sbjct: 558 KGKEGQLGLGDYLNRST---PTLVDALEGRQVESISCGYNYTAAV 599



 Score = 77.8 bits (190), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 59/217 (27%), Positives = 102/217 (47%), Gaps = 20/217 (9%)

Query: 271 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 330
           V  IA G ++   +T  G VYS+G+ S+  +G+       +P+ +++     +HV  V+ 
Sbjct: 263 VQSIACGETHAAIITKQGEVYSWGNESSGGIGNQVNIKVSRPKLVESV--ASLHVKAVAY 320

Query: 331 GDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEP---LSSLKSHLAVQVCARKRKT 387
           G +H  A+  SG ++ WG+G    +G  D     L  P    S L     V++      T
Sbjct: 321 GSKHACAVTVSGELFEWGEG--PHMGQLDCYANNLWFPHKLFSPLDGISVVKIACGPWHT 378

Query: 388 FVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTD 447
            ++  +G +Y +G   FG LG  D   +    RP+ ++ L+   V  ++ G +HT  + +
Sbjct: 379 AIITSSGQLYTYGDGTFGVLGHGD---TQGTTRPKEVEYLKGSRVKCVACGPWHTAAIVE 435

Query: 448 ----------RGRLFGFGDNERAQLGHDTLRGCLEPT 474
                     R +LF +GD +R +LGH   +  L PT
Sbjct: 436 VLSDFKSNSPRSKLFTWGDADRGKLGHADKKMKLIPT 472



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 42/154 (27%), Positives = 70/154 (45%), Gaps = 2/154 (1%)

Query: 323 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCA 382
           + V  ++ G+ H   +   G VY+WG    G +G+   I  + P+ + S+ S L V+  A
Sbjct: 261 LDVQSIACGETHAAIITKQGEVYSWGNESSGGIGNQVNIKVSRPKLVESVAS-LHVKAVA 319

Query: 383 RKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHT 442
              K    V T S   F W     +G  D   ++     ++   L    V +I+ G +HT
Sbjct: 320 YGSKHACAV-TVSGELFEWGEGPHMGQLDCYANNLWFPHKLFSPLDGISVVKIACGPWHT 378

Query: 443 VVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 476
            ++T  G+L+ +GD     LGH   +G   P E+
Sbjct: 379 AIITSSGQLYTYGDGTFGVLGHGDTQGTTRPKEV 412


>gi|281361147|ref|NP_608388.2| HERC2 [Drosophila melanogaster]
 gi|91206848|sp|Q9VR91.3|HERC2_DROME RecName: Full=Probable E3 ubiquitin-protein ligase HERC2; AltName:
            Full=HECT domain and RCC1-like domain-containing protein
            2
 gi|272506184|gb|AAF50913.3| HERC2 [Drosophila melanogaster]
          Length = 4912

 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 101/347 (29%), Positives = 162/347 (46%), Gaps = 8/347 (2%)

Query: 129  SSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCG 188
            S+++  G +  G LG G E ++  + T     S    VQ++  E     V   G++F  G
Sbjct: 4049 STIYGWGHNHRGQLG-GLEGSRIKTPTPCEALSLLRPVQLAGGEQSLFAVTPDGKLFATG 4107

Query: 189  DNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQV--TAGLNFTGFLTIRGHVHTCGSNTHG 246
              S    G   ++     P L+ +L+ V  K+V   +G      LT  G V+  G    G
Sbjct: 4108 YGSGGRLGVGGSDSWAI-PTLLGSLQHVFVKKVAVNSGGKHCLALTTEGEVYAWGEGEDG 4166

Query: 247  QLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ 306
            +LGHG+ +    PK +  L  + SV  IA G ++  A+T +G V ++G G    LGHG+ 
Sbjct: 4167 KLGHGNRMSYDRPKLVEHLNGM-SVADIACGSAHSAAITASGHVLTWGKGRYGRLGHGDS 4225

Query: 307  HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP 366
             D+L+P+ ++         +   +GD   + +     V++WG G  G LG G      LP
Sbjct: 4226 EDQLRPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKLP 4285

Query: 367  EPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDS 426
              + SL     V+V    + +  L  +G+VY +G   F  LG    G  D V RP+ + +
Sbjct: 4286 YKIESLAGLGVVKVECGSQFSVALTKSGAVYTWGKGDFHRLG---HGSVDHVRRPKKVAA 4342

Query: 427  LRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEP 473
            L+   +  I+TG  H V  +D G ++ +GDN+  QLG  T+     P
Sbjct: 4343 LQGKKIISIATGSLHCVACSDSGEVYTWGDNDEGQLGDGTVTAIQRP 4389



 Score =  122 bits (307), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 86/283 (30%), Positives = 138/283 (48%), Gaps = 9/283 (3%)

Query: 166  VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIF-RPRLVEALKGVPCKQVTAG 224
            V V++   H   +   G+V+  G+      GH   NR  + RP+LVE L G+    +  G
Sbjct: 4139 VAVNSGGKHCLALTTEGEVYAWGEGEDGKLGH--GNRMSYDRPKLVEHLNGMSVADIACG 4196

Query: 225  LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSV-VQIAAGPSYMLA 283
               +  +T  GHV T G   +G+LGHGD+ D+  PK +  L    ++ +   +G +  L 
Sbjct: 4197 SAHSAAITASGHVLTWGKGRYGRLGHGDSEDQLRPKLVEALLGYRAIDIACGSGDAQTLC 4256

Query: 284  VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 343
            +T +  V+S+G G    LG G       P  I++    G+ VV+V  G +  VAL  SG 
Sbjct: 4257 ITDDDNVWSWGDGDYGKLGRGGSDGCKLPYKIESL--AGLGVVKVECGSQFSVALTKSGA 4314

Query: 344  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 403
            VYTWGKG    LGHG       P+ +++L+    + +           D+G VY +G   
Sbjct: 4315 VYTWGKGDFHRLGHGSVDHVRRPKKVAALQGKKIISIATGSLHCVACSDSGEVYTWGDND 4374

Query: 404  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT 446
             G LG    G    + RPR++ +L+  H+ +++ G  HT+ ++
Sbjct: 4375 EGQLG---DGTVTAIQRPRLVAALQGKHIVKVTCGSAHTLALS 4414



 Score =  121 bits (304), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 102/338 (30%), Positives = 159/338 (47%), Gaps = 17/338 (5%)

Query: 114  MQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ---VS 169
            + I  G     ++S +  V++CG    G LG G   T  V           +VV+   V 
Sbjct: 3022 IHIAGGSKSLFIVSQDGKVYACGEGTNGRLGLG--VTHNVPLPHQLPVLRQYVVKKVAVH 3079

Query: 170  ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIF-RPRLVEALKGVPCKQVTAGLNFT 228
            +   HA  +   G+VF+ G+      GH   NR    +PRLVEAL+    + V  G + +
Sbjct: 3080 SGGKHALALTLDGKVFSWGEGEDGKLGH--GNRTTLDKPRLVEALRAKKIRDVACGSSHS 3137

Query: 229  GFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGP--SYMLAVTG 286
              ++ +G ++T G   +G+LGHGD   +  PK +  L     VVQ+A G   +  LA+T 
Sbjct: 3138 AAISSQGELYTWGLGEYGRLGHGDNTTQLKPKLVTALAGR-RVVQVACGSRDAQTLALTE 3196

Query: 287  NGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYT 346
            +G V+S+G G    LG G       P  I+  R  GI VV++  G +  +AL  +G V+T
Sbjct: 3197 DGAVFSWGDGDFGKLGRGGSEGSDTPHEIE--RLSGIGVVQIECGAQFSLALTRAGEVWT 3254

Query: 347  WGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGS 406
            WGKG    LGHG +     P+P+  L+    + V         + D G VY +G    G 
Sbjct: 3255 WGKGDYYRLGHGGDQHVRKPQPIGGLRGRRVIHVAVGALHCLAVTDAGQVYAWGDNDHGQ 3314

Query: 407  LGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV 444
             G  +  V+ K   P ++  L A  V++++ G  H++ 
Sbjct: 3315 QGSGNTFVNKK---PALVIGLDAVFVNRVACGSSHSIA 3349



 Score =  115 bits (287), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 87/294 (29%), Positives = 139/294 (47%), Gaps = 17/294 (5%)

Query: 177  FVLQSGQVFTCGDNSSFCCGHRDT-NRPIFRPRLVEALKGVPCKQVT--AGLNFTGFLTI 233
             V Q G+V+ CG+ ++   G   T N P+  P  +  L+    K+V   +G      LT+
Sbjct: 3033 IVSQDGKVYACGEGTNGRLGLGVTHNVPL--PHQLPVLRQYVVKKVAVHSGGKHALALTL 3090

Query: 234  RGHVHTCGSNTHGQLGHGD--TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
             G V + G    G+LGHG+  TLD+P    +        +  +A G S+  A++  G +Y
Sbjct: 3091 DGKVFSWGEGEDGKLGHGNRTTLDKP---RLVEALRAKKIRDVACGSSHSAAISSQGELY 3147

Query: 292  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEHVVALDSSGYVYTWGK 349
            ++G G    LGHG+   +L+P+ +      G  VV+V+ G  D   +AL   G V++WG 
Sbjct: 3148 TWGLGEYGRLGHGDNTTQLKPKLVTAL--AGRRVVQVACGSRDAQTLALTEDGAVFSWGD 3205

Query: 350  GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGF 409
            G  G LG G       P  +  L     VQ+    + +  L   G V+ +G   +  LG 
Sbjct: 3206 GDFGKLGRGGSEGSDTPHEIERLSGIGVVQIECGAQFSLALTRAGEVWTWGKGDYYRLG- 3264

Query: 410  PDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 463
               G    V +P+ +  LR   V  ++ G  H + VTD G+++ +GDN+  Q G
Sbjct: 3265 --HGGDQHVRKPQPIGGLRGRRVIHVAVGALHCLAVTDAGQVYAWGDNDHGQQG 3316



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 82/269 (30%), Positives = 132/269 (49%), Gaps = 15/269 (5%)

Query: 184 VFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 243
            ++ G       GH DT+     P  + AL+    + V  G +++  +T  G++ T G  
Sbjct: 637 AYSWGTGEDHRLGHGDTHARAV-PTKIAALEQHCVQSVYCGCSYSAAITCGGNLLTWGRG 695

Query: 244 THGQLGHGDTLDRPTPKSIAPLEEVGSV-VQIAAGPSYMLAVTGNGVVYSFGSGSNFCLG 302
           T+ +LGHG++ DR  P  +  L +   V V + +G ++ LA+T  G+V+++G G    LG
Sbjct: 696 TYARLGHGNSDDRSLPTLVVALSDHMVVDVALGSGDAHSLALTSEGLVFAWGDGDYGKLG 755

Query: 303 HGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEID 362
           +G  +  LQP  +++  R    V RV AG +  VAL S G +YTWGK  C  LGH   ++
Sbjct: 756 NGNCNGSLQPILVESLPR----VQRVFAGSQFSVALSSEGQLYTWGKATC--LGH-QLVE 808

Query: 363 K-----TLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDK 417
           +     ++P  +SSL+    V V         L  +G V+G+G      +  P    S+ 
Sbjct: 809 RSVQGCSVPRLVSSLQHKRIVDVAVSVAHCLALSSSGEVFGWGRNDSQQI-CPASVSSEP 867

Query: 418 VLRPRILDSLRAHHVSQISTGLYHTVVVT 446
           +LR  IL SL     S I+     ++V T
Sbjct: 868 LLRTPILVSLPTFPASGIACTSAQSLVWT 896



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 82/284 (28%), Positives = 127/284 (44%), Gaps = 14/284 (4%)

Query: 113  NMQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTR---INFPSAAHVVQV 168
             + + +G  H L L +   V++ G    G LGHG      +S+ R   +   +   V  +
Sbjct: 4138 KVAVNSGGKHCLALTTEGEVYAWGEGEDGKLGHGNR----MSYDRPKLVEHLNGMSVADI 4193

Query: 169  SASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFT 228
            +    H+A +  SG V T G       GH D+   + RP+LVEAL G     +  G    
Sbjct: 4194 ACGSAHSAAITASGHVLTWGKGRYGRLGHGDSEDQL-RPKLVEALLGYRAIDIACGSGDA 4252

Query: 229  GFLTIRG--HVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTG 286
              L I    +V + G   +G+LG G +     P  I  L  +G VV++  G  + +A+T 
Sbjct: 4253 QTLCITDDDNVWSWGDGDYGKLGRGGSDGCKLPYKIESLAGLG-VVKVECGSQFSVALTK 4311

Query: 287  NGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYT 346
            +G VY++G G    LGHG      +P+ +     +G  ++ ++ G  H VA   SG VYT
Sbjct: 4312 SGAVYTWGKGDFHRLGHGSVDHVRRPKKVAAL--QGKKIISIATGSLHCVACSDSGEVYT 4369

Query: 347  WGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVL 390
            WG    G LG G       P  +++L+    V+V      T  L
Sbjct: 4370 WGDNDEGQLGDGTVTAIQRPRLVAALQGKHIVKVTCGSAHTLAL 4413



 Score = 95.1 bits (235), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 71/245 (28%), Positives = 115/245 (46%), Gaps = 12/245 (4%)

Query: 237  VHTCGSNTHGQLG--HGDTLDRPT-PKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
            V   G N   QLG   G  +  PT  ++I+ L  +     IA G   +  V+ +G VY+ 
Sbjct: 2988 VMVWGLNDKEQLGGLKGSKVKVPTFSQTISRLRPI----HIAGGSKSLFIVSQDGKVYAC 3043

Query: 294  GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 353
            G G+N  LG G  H+   P  +   R+  +  V V +G +H +AL   G V++WG+G  G
Sbjct: 3044 GEGTNGRLGLGVTHNVPLPHQLPVLRQYVVKKVAVHSGGKHALALTLDGKVFSWGEGEDG 3103

Query: 354  ALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRG 413
             LGHG+      P  + +L++     V      +  +   G +Y +G   +G LG  D  
Sbjct: 3104 KLGHGNRTTLDKPRLVEALRAKKIRDVACGSSHSAAISSQGELYTWGLGEYGRLGHGDNT 3163

Query: 414  VSDKVLRPRILDSLRAHHVSQISTGLY--HTVVVTDRGRLFGFGDNERAQLGHDTLRGCL 471
                 L+P+++ +L    V Q++ G     T+ +T+ G +F +GD +  +LG     G  
Sbjct: 3164 TQ---LKPKLVTALAGRRVVQVACGSRDAQTLALTEDGAVFSWGDGDFGKLGRGGSEGSD 3220

Query: 472  EPTEI 476
             P EI
Sbjct: 3221 TPHEI 3225



 Score = 91.3 bits (225), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 69/238 (28%), Positives = 113/238 (47%), Gaps = 12/238 (5%)

Query: 230 FLTIRGH--VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN 287
           FL I  +   ++ G+    +LGHGDT  R  P  IA LE+   V  +  G SY  A+T  
Sbjct: 628 FLAIDSNHNAYSWGTGEDHRLGHGDTHARAVPTKIAALEQ-HCVQSVYCGCSYSAAITCG 686

Query: 288 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 347
           G + ++G G+   LGHG   D   P  +       +  V + +GD H +AL S G V+ W
Sbjct: 687 GNLLTWGRGTYARLGHGNSDDRSLPTLVVALSDHMVVDVALGSGDAHSLALTSEGLVFAW 746

Query: 348 GKGYCGALGHGD---EIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGF 404
           G G  G LG+G+    +   L E L  ++     +V A  + +  L   G +Y +G    
Sbjct: 747 GDGDYGKLGNGNCNGSLQPILVESLPRVQ-----RVFAGSQFSVALSSEGQLYTWGKATC 801

Query: 405 GSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQL 462
                 +R V    + PR++ SL+   +  ++  + H + ++  G +FG+G N+  Q+
Sbjct: 802 LGHQLVERSVQGCSV-PRLVSSLQHKRIVDVAVSVAHCLALSSSGEVFGWGRNDSQQI 858



 Score = 89.0 bits (219), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 75/258 (29%), Positives = 125/258 (48%), Gaps = 16/258 (6%)

Query: 224  GLNFTGFLTIRGHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSY 280
             L++ G  TI G  H    N  GQLG   G  +  PTP ++++ L  V    Q+A G   
Sbjct: 4042 ALSWGGASTIYGWGH----NHRGQLGGLEGSRIKTPTPCEALSLLRPV----QLAGGEQS 4093

Query: 281  MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 340
            + AVT +G +++ G GS   LG G       P  + + +   +  V V++G +H +AL +
Sbjct: 4094 LFAVTPDGKLFATGYGSGGRLGVGGSDSWAIPTLLGSLQHVFVKKVAVNSGGKHCLALTT 4153

Query: 341  SGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 400
             G VY WG+G  G LGHG+ +    P+ +  L       +      +  +  +G V  +G
Sbjct: 4154 EGEVYAWGEGEDGKLGHGNRMSYDRPKLVEHLNGMSVADIACGSAHSAAITASGHVLTWG 4213

Query: 401  WMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDNE 458
               +G LG  D   S+  LRP+++++L  +    I+  +G   T+ +TD   ++ +GD +
Sbjct: 4214 KGRYGRLGHGD---SEDQLRPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGD 4270

Query: 459  RAQLGHDTLRGCLEPTEI 476
              +LG     GC  P +I
Sbjct: 4271 YGKLGRGGSDGCKLPYKI 4288



 Score = 62.4 bits (150), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 48/205 (23%), Positives = 91/205 (44%), Gaps = 15/205 (7%)

Query: 271 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 330
           + Q+A   + ML ++  G +Y++               E +P  ++         +    
Sbjct: 574 IKQVACCETQMLILSQEGKLYTWRLAK----------PEAEPLPMEEVAHDVFISIAGHC 623

Query: 331 GDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVL 390
              H +A+DS+   Y+WG G    LGHGD   + +P  +++L+ H    V      +  +
Sbjct: 624 EGRHFLAIDSNHNAYSWGTGEDHRLGHGDTHARAVPTKIAALEQHCVQSVYCGCSYSAAI 683

Query: 391 VDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDR 448
              G++  +G   +  LG    G SD    P ++ +L  H V  ++  +G  H++ +T  
Sbjct: 684 TCGGNLLTWGRGTYARLG---HGNSDDRSLPTLVVALSDHMVVDVALGSGDAHSLALTSE 740

Query: 449 GRLFGFGDNERAQLGHDTLRGCLEP 473
           G +F +GD +  +LG+    G L+P
Sbjct: 741 GLVFAWGDGDYGKLGNGNCNGSLQP 765



 Score = 45.1 bits (105), Expect = 0.087,   Method: Compositional matrix adjust.
 Identities = 35/135 (25%), Positives = 63/135 (46%), Gaps = 5/135 (3%)

Query: 332  DEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 391
            D+  ++   +  +Y WG  + G LG  +      P P  +L     VQ+   ++  F + 
Sbjct: 4039 DDWALSWGGASTIYGWGHNHRGQLGGLEGSRIKTPTPCEALSLLRPVQLAGGEQSLFAVT 4098

Query: 392  DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRG 449
              G ++     G+GS G    G SD    P +L SL+   V +++  +G  H + +T  G
Sbjct: 4099 PDGKLFA---TGYGSGGRLGVGGSDSWAIPTLLGSLQHVFVKKVAVNSGGKHCLALTTEG 4155

Query: 450  RLFGFGDNERAQLGH 464
             ++ +G+ E  +LGH
Sbjct: 4156 EVYAWGEGEDGKLGH 4170


>gi|328701601|ref|XP_001942852.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC1
           [Acyrthosiphon pisum]
          Length = 4257

 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 94/293 (32%), Positives = 146/293 (49%), Gaps = 10/293 (3%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           VV+   ++N A       +VF  G NSS       T      PRLV +L  V  +QV AG
Sbjct: 325 VVRTPLNQNSAELPQPLSEVFMWGSNSSNQHAEGATEVTDI-PRLVRSLSDV--QQVEAG 381

Query: 225 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 284
              T  +  +G V  CG N++G+LG G++ ++P PK I    ++  V        + LA+
Sbjct: 382 QYCTFIIDTKGCVSACGKNSYGRLGLGNSSNQPVPKRININCKIKQVSSSKGCDGHSLAL 441

Query: 285 TGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQ-TFRRKGIHVVRVSAGDEHVVALDSSGY 343
           +  G VYS+G G    LGHG+     +P+ IQ  F  K I +  VSAG  H  A+ S G 
Sbjct: 442 SDTGEVYSWGDGDYGKLGHGDVATHKEPKLIQGPFIGKVIEL--VSAGYRHSAAVTSDGQ 499

Query: 344 VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSH-LAVQVCARKRKTFVLVDTGSVYGFGWM 402
           +YTWG+G  G LGHGD   + +P  + SL    +    C          D  +V+ FG  
Sbjct: 500 LYTWGEGDHGRLGHGDCNPRFIPTLVKSLSDMPVGYVACGSTHTLACSRDGNTVWSFGSG 559

Query: 403 GFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFG 455
             G LG    G + ++ +P+ ++ LR + + +++ G++ +V +T  G +F +G
Sbjct: 560 DNGKLG---HGNTIRLYKPQKIEGLRHYKIKKVAAGIHFSVALTCTGEVFTWG 609



 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 111/351 (31%), Positives = 171/351 (48%), Gaps = 24/351 (6%)

Query: 106 IVETSAGNMQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAH 164
           +V + +   Q+  G+Y T +I +   V +CG +  G LG G  + Q V   RIN      
Sbjct: 368 LVRSLSDVQQVEAGQYCTFIIDTKGCVSACGKNSYGRLGLGNSSNQPVP-KRINI--NCK 424

Query: 165 VVQVSAS---ENHAAFVLQSGQVFTCGDNSSFCCGHRD--TNRPIFRPRLVE-ALKGVPC 218
           + QVS+S   + H+  +  +G+V++ GD      GH D  T++    P+L++    G   
Sbjct: 425 IKQVSSSKGCDGHSLALSDTGEVYSWGDGDYGKLGHGDVATHK---EPKLIQGPFIGKVI 481

Query: 219 KQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGP 278
           + V+AG   +  +T  G ++T G   HG+LGHGD   R  P  +  L ++  V  +A G 
Sbjct: 482 ELVSAGYRHSAAVTSDGQLYTWGEGDHGRLGHGDCNPRFIPTLVKSLSDM-PVGYVACGS 540

Query: 279 SYMLAVTGNG-VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
           ++ LA + +G  V+SFGSG N  LGHG      +P+ I+  R   I   +V+AG    VA
Sbjct: 541 THTLACSRDGNTVWSFGSGDNGKLGHGNTIRLYKPQKIEGLRHYKIK--KVAAGIHFSVA 598

Query: 338 LDSSGYVYTWGKGYCGALGHGD-EIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSV 396
           L  +G V+TWG+G    LG G  EI    P  +  L   + + +         L    +V
Sbjct: 599 LTCTGEVFTWGQG--SNLGCGSSEITLFSPAVVEDLMQQMIIDISVGDSHCLALTRNCAV 656

Query: 397 YGFGWMGFGSLGFPDRGVS-DKVLRPRILDSLRAHHVSQISTGLYHTVVVT 446
           Y +G  G G  G   +G S   V RP  + +L    ++QIS G  H+V  T
Sbjct: 657 YAWGSNGKGQCG---QGHSTSPVSRPSKVINLEGKQINQISAGTSHSVAWT 704



 Score =  105 bits (263), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 95/331 (28%), Positives = 148/331 (44%), Gaps = 22/331 (6%)

Query: 124  LLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSAS---ENHAAFVLQ 180
            +L S  +V SCG    G LGHG  +    + T I+      + QVS S   + H+  + +
Sbjct: 3440 VLTSQGTVLSCGEGNYGRLGHG-HSDSLPNLTMISALQGFVITQVSTSIGSDGHSLALTE 3498

Query: 181  SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTC 240
            +G+VF+ GD      GH +  R   +P+L+E+L  V   QV  G   +  L+  G V+  
Sbjct: 3499 TGEVFSWGDGDFGKLGHGNNERQ-RKPKLIESLYDVVVIQVACGHKHSAVLSQDGEVYVF 3557

Query: 241  GSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 300
            GS  HG+LG G  +++  P  I   +   ++  IA G ++ + + G  VV++FG G    
Sbjct: 3558 GSAEHGKLGLGGHINKKRPTKIVH-KGFLNIKYIACGQNHTICI-GENVVWAFGEGEGGK 3615

Query: 301  LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 360
            LG G + D   P+ I T   K I   +   G+   + L   G +Y+     CG+    D 
Sbjct: 3616 LGIGSKKDIYVPQEIITLNGKNIK--KAYCGNGFTMFLSEDGELYS-----CGSDNLQDA 3668

Query: 361  ID-----KTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVS 415
             D     K +PE +   +  +   V        VL   G V+ +G    G LGF   G  
Sbjct: 3669 TDVLYTEKLIPEKIFEFQGQIVTDVATGPDHVLVLTARGHVWAWGNNCEGILGF---GHD 3725

Query: 416  DKVLRPRILDSLRAHHVSQISTGLYHTVVVT 446
              V +P I+  L   ++ QI+T   H    T
Sbjct: 3726 LPVQKPMIIQILSDKNIKQIATSRTHCAAWT 3756



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 80/298 (26%), Positives = 142/298 (47%), Gaps = 14/298 (4%)

Query: 174  HAAFVLQS-GQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF-- 230
            +  FVL S G V +CG+ +    GH  ++  +    ++ AL+G    QV+  +   G   
Sbjct: 3436 NCTFVLTSQGTVLSCGEGNYGRLGHGHSDS-LPNLTMISALQGFVITQVSTSIGSDGHSL 3494

Query: 231  -LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 289
             LT  G V + G    G+LGHG+   +  PK I  L +V  V+Q+A G  +   ++ +G 
Sbjct: 3495 ALTETGEVFSWGDGDFGKLGHGNNERQRKPKLIESLYDV-VVIQVACGHKHSAVLSQDGE 3553

Query: 290  VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 349
            VY FGS  +  LG G   ++ +P  I    +  +++  ++ G  H + +     V+ +G+
Sbjct: 3554 VYVFGSAEHGKLGLGGHINKKRPTKI--VHKGFLNIKYIACGQNHTICI-GENVVWAFGE 3610

Query: 350  GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGF 409
            G  G LG G + D  +P+ + +L      +       T  L + G +Y  G         
Sbjct: 3611 GEGGKLGIGSKKDIYVPQEIITLNGKNIKKAYCGNGFTMFLSEDGELYSCGSDNLQDAT- 3669

Query: 410  PDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQL--GHD 465
             D   ++K++  +I +  +   V+ ++TG  H +V+T RG ++ +G+N    L  GHD
Sbjct: 3670 -DVLYTEKLIPEKIFE-FQGQIVTDVATGPDHVLVLTARGHVWAWGNNCEGILGFGHD 3725



 Score = 86.7 bits (213), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 72/276 (26%), Positives = 123/276 (44%), Gaps = 10/276 (3%)

Query: 204  IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 263
            I+ P  ++  K    +++  G N T  LT +G V +CG   +G+LGHG +   P    I+
Sbjct: 3416 IWSPIKIQNFK--IAQRIVCGQNCTFVLTSQGTVLSCGEGNYGRLGHGHSDSLPNLTMIS 3473

Query: 264  PLE--EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRK 321
             L+   +  V        + LA+T  G V+S+G G    LGHG    + +P+ I++    
Sbjct: 3474 ALQGFVITQVSTSIGSDGHSLALTETGEVFSWGDGDFGKLGHGNNERQRKPKLIESLY-- 3531

Query: 322  GIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVC 381
             + V++V+ G +H   L   G VY +G    G LG G  I+K  P  +   K  L ++  
Sbjct: 3532 DVVVIQVACGHKHSAVLSQDGEVYVFGSAEHGKLGLGGHINKKRPTKIVH-KGFLNIKYI 3590

Query: 382  ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYH 441
            A  +   + +    V+ FG    G LG    G    +  P+ + +L   ++ +   G   
Sbjct: 3591 ACGQNHTICIGENVVWAFGEGEGGKLGI---GSKKDIYVPQEIITLNGKNIKKAYCGNGF 3647

Query: 442  TVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF 477
            T+ +++ G L+  G +             L P +IF
Sbjct: 3648 TMFLSEDGELYSCGSDNLQDATDVLYTEKLIPEKIF 3683



 Score = 76.6 bits (187), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 69/243 (28%), Positives = 108/243 (44%), Gaps = 15/243 (6%)

Query: 241  GSNTHGQLGH---GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 297
            G+  +GQLG    G  ++  +P  I   +      +I  G +    +T  G V S G G+
Sbjct: 3398 GNGRNGQLGDTAVGQCINIWSPIKI---QNFKIAQRIVCGQNCTFVLTSQGTVLSCGEGN 3454

Query: 298  NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG---DEHVVALDSSGYVYTWGKGYCGA 354
               LGHG  H +  P        +G  + +VS     D H +AL  +G V++WG G  G 
Sbjct: 3455 YGRLGHG--HSDSLPNLTMISALQGFVITQVSTSIGSDGHSLALTETGEVFSWGDGDFGK 3512

Query: 355  LGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGV 414
            LGHG+   +  P+ + SL   + +QV    + + VL   G VY FG    G LG    G 
Sbjct: 3513 LGHGNNERQRKPKLIESLYDVVVIQVACGHKHSAVLSQDGEVYVFGSAEHGKLGL---GG 3569

Query: 415  SDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPT 474
                 RP  +      ++  I+ G  HT+ + +   ++ FG+ E  +LG  + +    P 
Sbjct: 3570 HINKKRPTKIVHKGFLNIKYIACGQNHTICIGE-NVVWAFGEGEGGKLGIGSKKDIYVPQ 3628

Query: 475  EIF 477
            EI 
Sbjct: 3629 EII 3631



 Score = 68.9 bits (167), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 68/245 (27%), Positives = 102/245 (41%), Gaps = 11/245 (4%)

Query: 235 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 294
             V   GSN+  Q   G T     P+ +  L +V    Q+ AG      +   G V + G
Sbjct: 342 SEVFMWGSNSSNQHAEGATEVTDIPRLVRSLSDVQ---QVEAGQYCTFIIDTKGCVSACG 398

Query: 295 SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG-DEHVVALDSSGYVYTWGKGYCG 353
             S   LG G   ++  P+ I    +  I  V  S G D H +AL  +G VY+WG G  G
Sbjct: 399 KNSYGRLGLGNSSNQPVPKRININCK--IKQVSSSKGCDGHSLALSDTGEVYSWGDGDYG 456

Query: 354 ALGHGDEIDKTLPEPLS-SLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDR 412
            LGHGD      P+ +       +   V A  R +  +   G +Y +G    G LG    
Sbjct: 457 KLGHGDVATHKEPKLIQGPFIGKVIELVSAGYRHSAAVTSDGQLYTWGEGDHGRLG---H 513

Query: 413 GVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGR-LFGFGDNERAQLGHDTLRGCL 471
           G  +    P ++ SL    V  ++ G  HT+  +  G  ++ FG  +  +LGH       
Sbjct: 514 GDCNPRFIPTLVKSLSDMPVGYVACGSTHTLACSRDGNTVWSFGSGDNGKLGHGNTIRLY 573

Query: 472 EPTEI 476
           +P +I
Sbjct: 574 KPQKI 578


>gi|242077750|ref|XP_002448811.1| hypothetical protein SORBIDRAFT_06g033680 [Sorghum bicolor]
 gi|241939994|gb|EES13139.1| hypothetical protein SORBIDRAFT_06g033680 [Sorghum bicolor]
          Length = 879

 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 98/323 (30%), Positives = 155/323 (47%), Gaps = 21/323 (6%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V  V+    HAA V +  +VFT G+  S   GH  T   +F+PRLVE+L     + +  G
Sbjct: 80  VSYVACGVKHAALVTRQSEVFTWGEECSGRLGH-GTGTNVFQPRLVESLSICNVELIACG 138

Query: 225 LNFTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSYM 281
              T  +T  G ++T G  TH  G LGHG  +    PK ++ PL+ +  V  ++ G  + 
Sbjct: 139 EFHTCAVTATGDLYTWGDGTHNAGLLGHGSNVSHWIPKRVSGPLDGL-PVSTVSCGTWHT 197

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL--- 338
             +T +G +Y+FG G+   LGHG +     P+ +++   KG+  + VS G  H  A+   
Sbjct: 198 ALITSSGQLYTFGDGTFGVLGHGNRASCSYPKEVESL--KGLRTISVSCGVWHTAAVVEV 255

Query: 339 ------DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVD 392
                  SSG ++TWG G    LGHGD   K  P  + SL  +   +       T  L  
Sbjct: 256 IISQSNASSGKLFTWGDGDKYRLGHGDRSSKLKPTCIPSLIDYNFHKAACGHTLTIGLTT 315

Query: 393 TGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDS-LRAHHVSQISTGLYHTVVVTDRGRL 451
           +G ++  G   +G LG P+    +    PR+++  L    V +++ G YH  V+T+ G +
Sbjct: 316 SGHIFTVGSSVYGQLGNPN----NDGRYPRLVEEQLGGGGVVEVACGSYHVAVLTNAGEV 371

Query: 452 FGFGDNERAQLGHDTLRGCLEPT 474
           + +G     +LGH  +     PT
Sbjct: 372 YTWGKGANGRLGHGDIADRKVPT 394



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 87/338 (25%), Positives = 151/338 (44%), Gaps = 20/338 (5%)

Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 179
           ++  L+   S VF+ G    G LGHG   T       +   S  +V  ++  E H   V 
Sbjct: 88  KHAALVTRQSEVFTWGEECSGRLGHG-TGTNVFQPRLVESLSICNVELIACGEFHTCAVT 146

Query: 180 QSGQVFTCGD--NSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHV 237
            +G ++T GD  +++   GH          R+   L G+P   V+ G   T  +T  G +
Sbjct: 147 ATGDLYTWGDGTHNAGLLGHGSNVSHWIPKRVSGPLDGLPVSTVSCGTWHTALITSSGQL 206

Query: 238 HTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV---------TGNG 288
           +T G  T G LGHG+      PK +  L+ +   + ++ G  +  AV           +G
Sbjct: 207 YTFGDGTFGVLGHGNRASCSYPKEVESLKGL-RTISVSCGVWHTAAVVEVIISQSNASSG 265

Query: 289 VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 348
            ++++G G  + LGHG++  +L+P  I +      H  + + G    + L +SG+++T G
Sbjct: 266 KLFTWGDGDKYRLGHGDRSSKLKPTCIPSLIDYNFH--KAACGHTLTIGLTTSGHIFTVG 323

Query: 349 KGYCGALGHGDEIDKTLPEPLSS-LKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSL 407
               G LG+ +  D   P  +   L     V+V        VL + G VY +G    G L
Sbjct: 324 SSVYGQLGNPNN-DGRYPRLVEEQLGGGGVVEVACGSYHVAVLTNAGEVYTWGKGANGRL 382

Query: 408 GFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVV 445
           G  D  ++D+ + P ++++LR   V +++ G   T  +
Sbjct: 383 GHGD--IADRKV-PTLVEALRDRSVKRVACGSSFTAAI 417



 Score = 95.1 bits (235), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 82/278 (29%), Positives = 132/278 (47%), Gaps = 18/278 (6%)

Query: 116 ITTGRYHTLLISNSS---VFSCGSSLCGVLGHGPETTQCVSFTRINFP-SAAHVVQVSAS 171
           I  G +HT  ++ +     +  G+   G+LGHG   +  +   R++ P     V  VS  
Sbjct: 135 IACGEFHTCAVTATGDLYTWGDGTHNAGLLGHGSNVSHWIP-KRVSGPLDGLPVSTVSCG 193

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
             H A +  SGQ++T GD +    GH +     + P+ VE+LKG+    V+ G+  T  +
Sbjct: 194 TWHTALITSSGQLYTFGDGTFGVLGHGNRASCSY-PKEVESLKGLRTISVSCGVWHTAAV 252

Query: 232 ---------TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 282
                       G + T G     +LGHGD   +  P  I  L +  +  + A G +  +
Sbjct: 253 VEVIISQSNASSGKLFTWGDGDKYRLGHGDRSSKLKPTCIPSLIDY-NFHKAACGHTLTI 311

Query: 283 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
            +T +G +++ GS     LG+   +D   PR ++  +  G  VV V+ G  HV  L ++G
Sbjct: 312 GLTTSGHIFTVGSSVYGQLGN-PNNDGRYPRLVEE-QLGGGGVVEVACGSYHVAVLTNAG 369

Query: 343 YVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQV 380
            VYTWGKG  G LGHGD  D+ +P  + +L+     +V
Sbjct: 370 EVYTWGKGANGRLGHGDIADRKVPTLVEALRDRSVKRV 407



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 79/287 (27%), Positives = 130/287 (45%), Gaps = 19/287 (6%)

Query: 189 DNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQL 248
           D S++  G   T   +  P+ +E+   +    V  G+     +T +  V T G    G+L
Sbjct: 54  DRSAYSPG---TTTDVLVPKPLESNVMLDVSYVACGVKHAALVTRQSEVFTWGEECSGRL 110

Query: 249 GHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC--LGHGEQ 306
           GHG   +   P+ +  L  + +V  IA G  +  AVT  G +Y++G G++    LGHG  
Sbjct: 111 GHGTGTNVFQPRLVESLS-ICNVELIACGEFHTCAVTATGDLYTWGDGTHNAGLLGHGSN 169

Query: 307 HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP 366
                P+ + +    G+ V  VS G  H   + SSG +YT+G G  G LGHG+    + P
Sbjct: 170 VSHWIPKRV-SGPLDGLPVSTVSCGTWHTALITSSGQLYTFGDGTFGVLGHGNRASCSYP 228

Query: 367 EPLSSLKSHLAVQVCARKRKTFVLVD---------TGSVYGFGWMGFGSLGFPDRGVSDK 417
           + + SLK    + V      T  +V+         +G ++ +G      LG  DR     
Sbjct: 229 KEVESLKGLRTISVSCGVWHTAAVVEVIISQSNASSGKLFTWGDGDKYRLGHGDRSSK-- 286

Query: 418 VLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 464
            L+P  + SL  ++  + + G   T+ +T  G +F  G +   QLG+
Sbjct: 287 -LKPTCIPSLIDYNFHKAACGHTLTIGLTTSGHIFTVGSSVYGQLGN 332



 Score = 59.3 bits (142), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 49/174 (28%), Positives = 76/174 (43%), Gaps = 4/174 (2%)

Query: 304 GEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK 363
           G   D L P+ +++     + V  V+ G +H   +     V+TWG+   G LGHG   + 
Sbjct: 61  GTTTDVLVPKPLES--NVMLDVSYVACGVKHAALVTRQSEVFTWGEECSGRLGHGTGTNV 118

Query: 364 TLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRP-R 422
             P  + SL       +   +  T  +  TG +Y +G  G  + G    G +     P R
Sbjct: 119 FQPRLVESLSICNVELIACGEFHTCAVTATGDLYTWG-DGTHNAGLLGHGSNVSHWIPKR 177

Query: 423 ILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 476
           +   L    VS +S G +HT ++T  G+L+ FGD     LGH     C  P E+
Sbjct: 178 VSGPLDGLPVSTVSCGTWHTALITSSGQLYTFGDGTFGVLGHGNRASCSYPKEV 231


>gi|194893471|ref|XP_001977881.1| GG19286 [Drosophila erecta]
 gi|190649530|gb|EDV46808.1| GG19286 [Drosophila erecta]
          Length = 4908

 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 101/347 (29%), Positives = 162/347 (46%), Gaps = 8/347 (2%)

Query: 129  SSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCG 188
            S+++  G +  G LG G E ++  + T     S    VQ++  E     V   G++F  G
Sbjct: 4045 STIYGWGHNHRGQLG-GLEGSRIKTPTPCEALSLLRPVQLAGGEQSLFAVTPDGKLFATG 4103

Query: 189  DNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQV--TAGLNFTGFLTIRGHVHTCGSNTHG 246
              S    G   ++     P L+ +L+ V  K+V   +G      LT  G V+  G    G
Sbjct: 4104 YGSGGRLGVGGSDSWAI-PTLLGSLQHVFVKKVAVNSGGKHCLALTTEGEVYAWGEGEDG 4162

Query: 247  QLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ 306
            +LGHG+ +    PK +  L  + SV  IA G ++  A+T +G V ++G G    LGHG+ 
Sbjct: 4163 KLGHGNRMSYDRPKLVEHLNGM-SVADIACGSAHSAAITASGHVLTWGKGRYGRLGHGDS 4221

Query: 307  HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP 366
             D+L+P+ ++         +   +GD   + +     V++WG G  G LG G      LP
Sbjct: 4222 EDQLRPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKLP 4281

Query: 367  EPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDS 426
              + SL     V+V    + +  L  +G+VY +G   F  LG    G  D V RP+ + +
Sbjct: 4282 YKIESLAGLGVVKVECGSQFSVALTKSGAVYTWGKGDFHRLG---HGSVDHVRRPKKVAA 4338

Query: 427  LRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEP 473
            L+   +  I+TG  H V  +D G ++ +GDN+  QLG  T+     P
Sbjct: 4339 LQGKKIISIATGSLHCVACSDSGEVYTWGDNDEGQLGDGTVTAIQRP 4385



 Score =  122 bits (307), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 86/283 (30%), Positives = 138/283 (48%), Gaps = 9/283 (3%)

Query: 166  VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIF-RPRLVEALKGVPCKQVTAG 224
            V V++   H   +   G+V+  G+      GH   NR  + RP+LVE L G+    +  G
Sbjct: 4135 VAVNSGGKHCLALTTEGEVYAWGEGEDGKLGH--GNRMSYDRPKLVEHLNGMSVADIACG 4192

Query: 225  LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSV-VQIAAGPSYMLA 283
               +  +T  GHV T G   +G+LGHGD+ D+  PK +  L    ++ +   +G +  L 
Sbjct: 4193 SAHSAAITASGHVLTWGKGRYGRLGHGDSEDQLRPKLVEALLGYRAIDIACGSGDAQTLC 4252

Query: 284  VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 343
            +T +  V+S+G G    LG G       P  I++    G+ VV+V  G +  VAL  SG 
Sbjct: 4253 ITDDDNVWSWGDGDYGKLGRGGSDGCKLPYKIESL--AGLGVVKVECGSQFSVALTKSGA 4310

Query: 344  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 403
            VYTWGKG    LGHG       P+ +++L+    + +           D+G VY +G   
Sbjct: 4311 VYTWGKGDFHRLGHGSVDHVRRPKKVAALQGKKIISIATGSLHCVACSDSGEVYTWGDND 4370

Query: 404  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT 446
             G LG    G    + RPR++ +L+  H+ +++ G  HT+ ++
Sbjct: 4371 EGQLG---DGTVTAIQRPRLVAALQGKHIVKVTCGSAHTLALS 4410



 Score =  122 bits (305), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 101/338 (29%), Positives = 158/338 (46%), Gaps = 17/338 (5%)

Query: 114  MQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTR---INFPSAAHVVQVS 169
            + I  G     ++S +  V++CG    G LG G   T  V       +        V V 
Sbjct: 3019 IHIAGGSKSLFIVSQDGKVYACGEGTNGRLGLG--VTHNVPLPHQLPVLHQYVVKKVAVH 3076

Query: 170  ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIF-RPRLVEALKGVPCKQVTAGLNFT 228
            +   HA  +   G+VF+ G+      GH   NR    +PRLVEAL+    + V  G + +
Sbjct: 3077 SGGKHALALTLDGKVFSWGEGEDGKLGH--GNRTTLDKPRLVEALRAKKIRDVACGSSHS 3134

Query: 229  GFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGP--SYMLAVTG 286
              ++ +G ++T G   +G+LGHGD + +  PK +  L     VVQ+A G   +  LA+T 
Sbjct: 3135 AAISSQGELYTWGLGEYGRLGHGDNVTQLKPKLVVALAG-RRVVQVACGSRDAQTLALTE 3193

Query: 287  NGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYT 346
            +G V+S+G G    LG G       P  I+  R  GI VV++  G +  +AL  +G V+T
Sbjct: 3194 DGAVFSWGDGDFGKLGRGGSEGSDTPHEIE--RLSGIGVVQIECGAQFSLALTRAGEVWT 3251

Query: 347  WGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGS 406
            WGKG    LGHG +     P+P+  L+    + V         + D G VY +G    G 
Sbjct: 3252 WGKGDYYRLGHGGDQHVRKPQPIGGLRGRRVIHVAVGALHCLAVTDAGQVYAWGDNDHGQ 3311

Query: 407  LGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV 444
             G  +  V+ K   P ++  L A  V++++ G  H++ 
Sbjct: 3312 QGSGNTFVNKK---PALVIGLDAVFVNRVACGSSHSIA 3346



 Score =  112 bits (281), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 87/294 (29%), Positives = 138/294 (46%), Gaps = 17/294 (5%)

Query: 177  FVLQSGQVFTCGDNSSFCCGHRDT-NRPIFRPRLVEALKGVPCKQVT--AGLNFTGFLTI 233
             V Q G+V+ CG+ ++   G   T N P+  P  +  L     K+V   +G      LT+
Sbjct: 3030 IVSQDGKVYACGEGTNGRLGLGVTHNVPL--PHQLPVLHQYVVKKVAVHSGGKHALALTL 3087

Query: 234  RGHVHTCGSNTHGQLGHGD--TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
             G V + G    G+LGHG+  TLD+P    +        +  +A G S+  A++  G +Y
Sbjct: 3088 DGKVFSWGEGEDGKLGHGNRTTLDKP---RLVEALRAKKIRDVACGSSHSAAISSQGELY 3144

Query: 292  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEHVVALDSSGYVYTWGK 349
            ++G G    LGHG+   +L+P+ +      G  VV+V+ G  D   +AL   G V++WG 
Sbjct: 3145 TWGLGEYGRLGHGDNVTQLKPKLVVAL--AGRRVVQVACGSRDAQTLALTEDGAVFSWGD 3202

Query: 350  GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGF 409
            G  G LG G       P  +  L     VQ+    + +  L   G V+ +G   +  LG 
Sbjct: 3203 GDFGKLGRGGSEGSDTPHEIERLSGIGVVQIECGAQFSLALTRAGEVWTWGKGDYYRLG- 3261

Query: 410  PDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 463
               G    V +P+ +  LR   V  ++ G  H + VTD G+++ +GDN+  Q G
Sbjct: 3262 --HGGDQHVRKPQPIGGLRGRRVIHVAVGALHCLAVTDAGQVYAWGDNDHGQQG 3313



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 82/284 (28%), Positives = 127/284 (44%), Gaps = 14/284 (4%)

Query: 113  NMQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTR---INFPSAAHVVQV 168
             + + +G  H L L +   V++ G    G LGHG      +S+ R   +   +   V  +
Sbjct: 4134 KVAVNSGGKHCLALTTEGEVYAWGEGEDGKLGHGNR----MSYDRPKLVEHLNGMSVADI 4189

Query: 169  SASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFT 228
            +    H+A +  SG V T G       GH D+   + RP+LVEAL G     +  G    
Sbjct: 4190 ACGSAHSAAITASGHVLTWGKGRYGRLGHGDSEDQL-RPKLVEALLGYRAIDIACGSGDA 4248

Query: 229  GFLTIRG--HVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTG 286
              L I    +V + G   +G+LG G +     P  I  L  +G VV++  G  + +A+T 
Sbjct: 4249 QTLCITDDDNVWSWGDGDYGKLGRGGSDGCKLPYKIESLAGLG-VVKVECGSQFSVALTK 4307

Query: 287  NGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYT 346
            +G VY++G G    LGHG      +P+ +     +G  ++ ++ G  H VA   SG VYT
Sbjct: 4308 SGAVYTWGKGDFHRLGHGSVDHVRRPKKVAAL--QGKKIISIATGSLHCVACSDSGEVYT 4365

Query: 347  WGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVL 390
            WG    G LG G       P  +++L+    V+V      T  L
Sbjct: 4366 WGDNDEGQLGDGTVTAIQRPRLVAALQGKHIVKVTCGSAHTLAL 4409



 Score = 94.7 bits (234), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 80/269 (29%), Positives = 132/269 (49%), Gaps = 15/269 (5%)

Query: 184 VFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 243
            ++ G       GH DT+     P  + AL+    + V  G +++  +T  G++ T G  
Sbjct: 634 AYSWGTGEDHRLGHGDTHARAV-PTKIAALEQHCVQSVYCGCSYSAAITCGGNLLTWGRG 692

Query: 244 THGQLGHGDTLDRPTPKSIAPLEEVGSV-VQIAAGPSYMLAVTGNGVVYSFGSGSNFCLG 302
           T+ +LGHG++ DR  P  +  L +   V V + +G ++ LA+T  G+V+++G G    LG
Sbjct: 693 TYARLGHGNSDDRSLPTLVVALSDHMVVDVALGSGDAHSLALTSEGLVFAWGDGDYGKLG 752

Query: 303 HGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEID 362
           +G  +  LQP  +++  R    V RV AG +  +AL S G +Y+WGK  C  LGH   ++
Sbjct: 753 NGNCNGSLQPILVESLPR----VQRVFAGSQFSLALSSEGQLYSWGKATC--LGH-QLVE 805

Query: 363 K-----TLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDK 417
           +     ++P  +SSL+    V V         L  +G V+G+G      +  P    S+ 
Sbjct: 806 RSVQGCSVPRLVSSLQHKRIVDVAVSVAHCLALSSSGEVFGWGRNDSQQI-CPASVSSEP 864

Query: 418 VLRPRILDSLRAHHVSQISTGLYHTVVVT 446
           +LR  IL SL     S I+     ++V T
Sbjct: 865 LLRTPILVSLPTFPASGIACTSAQSLVWT 893



 Score = 92.4 bits (228), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 69/238 (28%), Positives = 113/238 (47%), Gaps = 12/238 (5%)

Query: 230 FLTIRGH--VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN 287
           FL I  +   ++ G+    +LGHGDT  R  P  IA LE+   V  +  G SY  A+T  
Sbjct: 625 FLAIDSNHNAYSWGTGEDHRLGHGDTHARAVPTKIAALEQ-HCVQSVYCGCSYSAAITCG 683

Query: 288 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 347
           G + ++G G+   LGHG   D   P  +       +  V + +GD H +AL S G V+ W
Sbjct: 684 GNLLTWGRGTYARLGHGNSDDRSLPTLVVALSDHMVVDVALGSGDAHSLALTSEGLVFAW 743

Query: 348 GKGYCGALGHGD---EIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGF 404
           G G  G LG+G+    +   L E L  ++     +V A  + +  L   G +Y +G    
Sbjct: 744 GDGDYGKLGNGNCNGSLQPILVESLPRVQ-----RVFAGSQFSLALSSEGQLYSWGKATC 798

Query: 405 GSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQL 462
                 +R V    + PR++ SL+   +  ++  + H + ++  G +FG+G N+  Q+
Sbjct: 799 LGHQLVERSVQGCSV-PRLVSSLQHKRIVDVAVSVAHCLALSSSGEVFGWGRNDSQQI 855



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 70/245 (28%), Positives = 114/245 (46%), Gaps = 12/245 (4%)

Query: 237  VHTCGSNTHGQLG--HGDTLDRPT-PKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
            V   G N   QLG   G  +  PT  ++I+ L  +     IA G   +  V+ +G VY+ 
Sbjct: 2985 VMVWGLNDKEQLGGLKGSKVKVPTFSQTISRLRPI----HIAGGSKSLFIVSQDGKVYAC 3040

Query: 294  GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 353
            G G+N  LG G  H+   P  +    +  +  V V +G +H +AL   G V++WG+G  G
Sbjct: 3041 GEGTNGRLGLGVTHNVPLPHQLPVLHQYVVKKVAVHSGGKHALALTLDGKVFSWGEGEDG 3100

Query: 354  ALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRG 413
             LGHG+      P  + +L++     V      +  +   G +Y +G   +G LG  D  
Sbjct: 3101 KLGHGNRTTLDKPRLVEALRAKKIRDVACGSSHSAAISSQGELYTWGLGEYGRLGHGDNV 3160

Query: 414  VSDKVLRPRILDSLRAHHVSQISTGLY--HTVVVTDRGRLFGFGDNERAQLGHDTLRGCL 471
                 L+P+++ +L    V Q++ G     T+ +T+ G +F +GD +  +LG     G  
Sbjct: 3161 TQ---LKPKLVVALAGRRVVQVACGSRDAQTLALTEDGAVFSWGDGDFGKLGRGGSEGSD 3217

Query: 472  EPTEI 476
             P EI
Sbjct: 3218 TPHEI 3222



 Score = 89.0 bits (219), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 75/258 (29%), Positives = 125/258 (48%), Gaps = 16/258 (6%)

Query: 224  GLNFTGFLTIRGHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSY 280
             L++ G  TI G     G N  GQLG   G  +  PTP ++++ L  V    Q+A G   
Sbjct: 4038 ALSWGGASTIYG----WGHNHRGQLGGLEGSRIKTPTPCEALSLLRPV----QLAGGEQS 4089

Query: 281  MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 340
            + AVT +G +++ G GS   LG G       P  + + +   +  V V++G +H +AL +
Sbjct: 4090 LFAVTPDGKLFATGYGSGGRLGVGGSDSWAIPTLLGSLQHVFVKKVAVNSGGKHCLALTT 4149

Query: 341  SGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 400
             G VY WG+G  G LGHG+ +    P+ +  L       +      +  +  +G V  +G
Sbjct: 4150 EGEVYAWGEGEDGKLGHGNRMSYDRPKLVEHLNGMSVADIACGSAHSAAITASGHVLTWG 4209

Query: 401  WMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDNE 458
               +G LG  D   S+  LRP+++++L  +    I+  +G   T+ +TD   ++ +GD +
Sbjct: 4210 KGRYGRLGHGD---SEDQLRPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGD 4266

Query: 459  RAQLGHDTLRGCLEPTEI 476
              +LG     GC  P +I
Sbjct: 4267 YGKLGRGGSDGCKLPYKI 4284



 Score = 62.8 bits (151), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 48/205 (23%), Positives = 92/205 (44%), Gaps = 15/205 (7%)

Query: 271 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 330
           + Q+A   + ML ++  G +Y++               E +P  ++    +    +    
Sbjct: 571 IKQVACCETQMLILSQEGKLYTWRLAK----------PEAEPLPMEEVAHEVFISIAGHC 620

Query: 331 GDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVL 390
              H +A+DS+   Y+WG G    LGHGD   + +P  +++L+ H    V      +  +
Sbjct: 621 EGRHFLAIDSNHNAYSWGTGEDHRLGHGDTHARAVPTKIAALEQHCVQSVYCGCSYSAAI 680

Query: 391 VDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDR 448
              G++  +G   +  LG    G SD    P ++ +L  H V  ++  +G  H++ +T  
Sbjct: 681 TCGGNLLTWGRGTYARLG---HGNSDDRSLPTLVVALSDHMVVDVALGSGDAHSLALTSE 737

Query: 449 GRLFGFGDNERAQLGHDTLRGCLEP 473
           G +F +GD +  +LG+    G L+P
Sbjct: 738 GLVFAWGDGDYGKLGNGNCNGSLQP 762



 Score = 45.1 bits (105), Expect = 0.092,   Method: Compositional matrix adjust.
 Identities = 35/135 (25%), Positives = 63/135 (46%), Gaps = 5/135 (3%)

Query: 332  DEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 391
            D+  ++   +  +Y WG  + G LG  +      P P  +L     VQ+   ++  F + 
Sbjct: 4035 DDWALSWGGASTIYGWGHNHRGQLGGLEGSRIKTPTPCEALSLLRPVQLAGGEQSLFAVT 4094

Query: 392  DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRG 449
              G ++     G+GS G    G SD    P +L SL+   V +++  +G  H + +T  G
Sbjct: 4095 PDGKLFA---TGYGSGGRLGVGGSDSWAIPTLLGSLQHVFVKKVAVNSGGKHCLALTTEG 4151

Query: 450  RLFGFGDNERAQLGH 464
             ++ +G+ E  +LGH
Sbjct: 4152 EVYAWGEGEDGKLGH 4166


>gi|224135109|ref|XP_002327568.1| predicted protein [Populus trichocarpa]
 gi|222836122|gb|EEE74543.1| predicted protein [Populus trichocarpa]
          Length = 973

 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 97/313 (30%), Positives = 147/313 (46%), Gaps = 21/313 (6%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V  +S    HAA + + G+VF  G+ S    GH+  +  +  P++VE+L GV  K V  G
Sbjct: 307 VTNISLGRKHAALITKRGEVFCWGEGSRGKLGHK-VDMDVSSPKMVESLDGVHVKSVACG 365

Query: 225 LNFTGFLTIRGHVHTCGSNTHG-QLGHGD-TLDRPTPKSIA-PLEEVGSVVQIAAGPSYM 281
              T  LT  G ++  G N +G  LG  + +  +  P+ I+ PL  V  ++ +A G  + 
Sbjct: 366 EYQTCALTDSGELYAWGENKYGANLGCEERSRSQWLPRRISGPLTGV-CILNVACGDWHT 424

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS- 340
             V+ +G ++++G GS   LGHG      QP+ +++   KG+ V  V+ G  H  A+   
Sbjct: 425 AIVSSSGQLFTYGDGSFGVLGHGNLLSVSQPKEVESL--KGLLVKSVACGSWHTAAIVDI 482

Query: 341 ----------SGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVL 390
                      G ++TWG G  G LGH D   K LP  ++ L      QV   +  T  L
Sbjct: 483 IVDRFKFNGVGGKLFTWGDGDKGRLGHADLEKKLLPTCVAQLVELDFDQVSCGRMLTVAL 542

Query: 391 VDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGR 450
            +TG VY  G    G LG P       V+   +   L+   V +IS+G YH   +T  G 
Sbjct: 543 TNTGKVYTMGSSVHGQLGNPHAKDKSIVI---VEGKLKEEFVKEISSGSYHVAALTSSGS 599

Query: 451 LFGFGDNERAQLG 463
           L+ +G     QLG
Sbjct: 600 LYTWGKGTNGQLG 612



 Score =  101 bits (252), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 89/293 (30%), Positives = 136/293 (46%), Gaps = 28/293 (9%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGV-LGHGPETTQCVSFTRINFP-SAAHVVQVSASE 172
           +  G Y T  +++S  +++ G +  G  LG    +       RI+ P +   ++ V+  +
Sbjct: 362 VACGEYQTCALTDSGELYAWGENKYGANLGCEERSRSQWLPRRISGPLTGVCILNVACGD 421

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG--- 229
            H A V  SGQ+FT GD S    GH +    + +P+ VE+LKG+  K V  G   T    
Sbjct: 422 WHTAIVSSSGQLFTYGDGSFGVLGHGNL-LSVSQPKEVESLKGLLVKSVACGSWHTAAIV 480

Query: 230 --------FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 281
                   F  + G + T G    G+LGH D   +  P  +A L E+    Q++ G    
Sbjct: 481 DIIVDRFKFNGVGGKLFTWGDGDKGRLGHADLEKKLLPTCVAQLVEL-DFDQVSCGRMLT 539

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 341
           +A+T  G VY+ GS  +  LG+    D  +   I   + K   V  +S+G  HV AL SS
Sbjct: 540 VALTNTGKVYTMGSSVHGQLGNPHAKD--KSIVIVEGKLKEEFVKEISSGSYHVAALTSS 597

Query: 342 GYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK----------SHLAVQVCARK 384
           G +YTWGKG  G LG G+  D+  P  + +L+          S+L   +C  K
Sbjct: 598 GSLYTWGKGTNGQLGLGNVEDRNFPTLVEALRDMQVQSIACGSNLTAAICLHK 650



 Score = 99.8 bits (247), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 80/273 (29%), Positives = 130/273 (47%), Gaps = 22/273 (8%)

Query: 207 PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 266
           P+L+E+   +    ++ G      +T RG V   G  + G+LGH   +D  +PK +  L+
Sbjct: 296 PKLLESTVMLDVTNISLGRKHAALITKRGEVFCWGEGSRGKLGHKVDMDVSSPKMVESLD 355

Query: 267 EVGSVVQIAAGPSYMLAVTGNGVVYSFGS---GSNFCLGHGEQ-HDELQPRAIQTFRRKG 322
            V  V  +A G     A+T +G +Y++G    G+N  LG  E+   +  PR I +    G
Sbjct: 356 GV-HVKSVACGEYQTCALTDSGELYAWGENKYGAN--LGCEERSRSQWLPRRI-SGPLTG 411

Query: 323 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCA 382
           + ++ V+ GD H   + SSG ++T+G G  G LGHG+ +  + P+ + SLK  L   V  
Sbjct: 412 VCILNVACGDWHTAIVSSSGQLFTYGDGSFGVLGHGNLLSVSQPKEVESLKGLLVKSVAC 471

Query: 383 RKRKTFVLVDT-----------GSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHH 431
               T  +VD            G ++ +G    G LG  D    +K L P  +  L    
Sbjct: 472 GSWHTAAIVDIIVDRFKFNGVGGKLFTWGDGDKGRLGHADL---EKKLLPTCVAQLVELD 528

Query: 432 VSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 464
             Q+S G   TV +T+ G+++  G +   QLG+
Sbjct: 529 FDQVSCGRMLTVALTNTGKVYTMGSSVHGQLGN 561



 Score = 92.8 bits (229), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 100/383 (26%), Positives = 166/383 (43%), Gaps = 35/383 (9%)

Query: 89  NWKRVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPE 147
           N K+V   L  +  S+ +++ +     I+ GR H  LI+    VF  G    G LGH  +
Sbjct: 287 NTKQVDALLPKLLESTVMLDVT----NISLGRKHAALITKRGEVFCWGEGSRGKLGHKVD 342

Query: 148 TTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDN---SSFCCGHRDTNRPI 204
                S   +      HV  V+  E     +  SG+++  G+N   ++  C  R  ++ +
Sbjct: 343 M-DVSSPKMVESLDGVHVKSVACGEYQTCALTDSGELYAWGENKYGANLGCEERSRSQWL 401

Query: 205 FRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP 264
            R R+   L GV    V  G   T  ++  G + T G  + G LGHG+ L    PK +  
Sbjct: 402 PR-RISGPLTGVCILNVACGDWHTAIVSSSGQLFTYGDGSFGVLGHGNLLSVSQPKEVES 460

Query: 265 LEEVGSVVQIAAGPSYMLAVTG--------NGV---VYSFGSGSNFCLGHGEQHDELQPR 313
           L+ +  V  +A G  +  A+          NGV   ++++G G    LGH +   +L P 
Sbjct: 461 LKGL-LVKSVACGSWHTAAIVDIIVDRFKFNGVGGKLFTWGDGDKGRLGHADLEKKLLPT 519

Query: 314 AIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
            +       +   +VS G    VAL ++G VYT G    G LG+    DK++      LK
Sbjct: 520 CVAQLVE--LDFDQVSCGRMLTVALTNTGKVYTMGSSVHGQLGNPHAKDKSIVIVEGKLK 577

Query: 374 SHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVS 433
                ++ +       L  +GS+Y +G    G LG  +  V D+   P ++++LR   V 
Sbjct: 578 EEFVKEISSGSYHVAALTSSGSLYTWGKGTNGQLGLGN--VEDRNF-PTLVEALRDMQVQ 634

Query: 434 QISTG--------LYHTVVVTDR 448
            I+ G        L+ ++ V+D+
Sbjct: 635 SIACGSNLTAAICLHKSISVSDQ 657



 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 64/218 (29%), Positives = 104/218 (47%), Gaps = 19/218 (8%)

Query: 271 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 330
           V  I+ G  +   +T  G V+ +G GS   LGH    D   P+ +++    G+HV  V+ 
Sbjct: 307 VTNISLGRKHAALITKRGEVFCWGEGSRGKLGHKVDMDVSSPKMVESL--DGVHVKSVAC 364

Query: 331 GDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKT--LPEPLS-SLKSHLAVQVCARKRKT 387
           G+    AL  SG +Y WG+   GA    +E  ++  LP  +S  L     + V      T
Sbjct: 365 GEYQTCALTDSGELYAWGENKYGANLGCEERSRSQWLPRRISGPLTGVCILNVACGDWHT 424

Query: 388 FVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV---- 443
            ++  +G ++ +G   FG LG    G    V +P+ ++SL+   V  ++ G +HT     
Sbjct: 425 AIVSSSGQLFTYGDGSFGVLG---HGNLLSVSQPKEVESLKGLLVKSVACGSWHTAAIVD 481

Query: 444 VVTDR-------GRLFGFGDNERAQLGHDTLRGCLEPT 474
           ++ DR       G+LF +GD ++ +LGH  L   L PT
Sbjct: 482 IIVDRFKFNGVGGKLFTWGDGDKGRLGHADLEKKLLPT 519



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 59/196 (30%), Positives = 97/196 (49%), Gaps = 6/196 (3%)

Query: 284 VTGNGV-VYSFGSGSN-FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 341
           + G GV V + G   N F   + +Q D L P+ +++     + V  +S G +H   +   
Sbjct: 266 IWGEGVEVGNIGCVDNQFGYHNTKQVDALLPKLLESTVM--LDVTNISLGRKHAALITKR 323

Query: 342 GYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGW 401
           G V+ WG+G  G LGH  ++D + P+ + SL       V   + +T  L D+G +Y +G 
Sbjct: 324 GEVFCWGEGSRGKLGHKVDMDVSSPKMVESLDGVHVKSVACGEYQTCALTDSGELYAWGE 383

Query: 402 MGFGS-LGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERA 460
             +G+ LG  +R  S  + R RI   L    +  ++ G +HT +V+  G+LF +GD    
Sbjct: 384 NKYGANLGCEERSRSQWLPR-RISGPLTGVCILNVACGDWHTAIVSSSGQLFTYGDGSFG 442

Query: 461 QLGHDTLRGCLEPTEI 476
            LGH  L    +P E+
Sbjct: 443 VLGHGNLLSVSQPKEV 458


>gi|195133162|ref|XP_002011008.1| GI16306 [Drosophila mojavensis]
 gi|193906983|gb|EDW05850.1| GI16306 [Drosophila mojavensis]
          Length = 5077

 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 98/337 (29%), Positives = 161/337 (47%), Gaps = 15/337 (4%)

Query: 114  MQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTR---INFPSAAHVVQVS 169
            + I  G     ++S +  V++CG    G LG G   T  V       +        V V 
Sbjct: 3097 IHIAGGSKSLFVVSQDGKVYACGEGTNGRLGLG--VTHNVPLPHQLPVLHQYVVKKVAVH 3154

Query: 170  ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
            +   HA  +   G+VF+ G+      GH + +  + +PRLVEAL+    + +  G + + 
Sbjct: 3155 SGGKHALALTLDGKVFSWGEGEDGKLGHGNRST-LDKPRLVEALRAKKIRDIACGSSHSA 3213

Query: 230  FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGP--SYMLAVTGN 287
             ++ +G ++T G   +G+LGHGD   +  PK +A L     V+Q+A G   +  LA+T +
Sbjct: 3214 AISSQGELYTWGLGEYGRLGHGDNATQLKPKLVAALSG-RRVIQVACGSRDAQTLALTED 3272

Query: 288  GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 347
            G V+S+G G    LG G       P  I+  R  GI V+++  G +  +AL  +G V+TW
Sbjct: 3273 GAVFSWGDGDFGKLGRGGSEGSSTPHEIE--RLSGIGVIQIECGAQFSLALTRAGEVWTW 3330

Query: 348  GKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSL 407
            GKG    LGHG +     P+P++ L+ H  + V         + D G VY +G    G  
Sbjct: 3331 GKGDYYRLGHGGDQHVRKPQPIAGLRGHRVIHVAVGALHCLAVTDAGQVYAWGDNDHGQQ 3390

Query: 408  GFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV 444
            G  +  V+ K   P ++  L A  V++++ G  H++ 
Sbjct: 3391 GSGNTFVNKK---PALVIGLDAVIVNRVACGSSHSMA 3424



 Score =  122 bits (305), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 100/347 (28%), Positives = 162/347 (46%), Gaps = 8/347 (2%)

Query: 129  SSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCG 188
            S+++  G +  G LG G E ++  + T     S    VQ++  E     V   G++F  G
Sbjct: 4214 STIYGWGHNHRGQLG-GLEGSRIKTPTPCEALSLLRPVQLAGGEQSLFAVTPDGKLFATG 4272

Query: 189  DNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQV--TAGLNFTGFLTIRGHVHTCGSNTHG 246
              S    G   ++     P L+ +L+ V  K+V   +G      LT  G V+  G    G
Sbjct: 4273 YGSGGRLGVGGSDSWAI-PTLLGSLQHVFVKKVAVNSGGKHCLALTTDGEVYAWGEGEDG 4331

Query: 247  QLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ 306
            +LGHG+ +    PK +  L  + SV  IA G ++  A+T +G V ++G G    LGHG+ 
Sbjct: 4332 KLGHGNRMSYDRPKLVEHLNGM-SVADIACGSAHSAAITASGHVLTWGKGRYGRLGHGDS 4390

Query: 307  HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP 366
             D+L+P+ ++         +   +GD   + +     V++WG G  G LG G      LP
Sbjct: 4391 EDQLRPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKLP 4450

Query: 367  EPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDS 426
              + SL     ++V    + +  L  +G+VY +G   F  LG    G  + V RP+ + +
Sbjct: 4451 YKIESLAGLGVIKVECGSQFSVALTKSGAVYTWGKGDFHRLG---HGSVEHVRRPKKVAA 4507

Query: 427  LRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEP 473
            L+   +  I+TG  H V  +D G +F +GDN+  QLG  T+     P
Sbjct: 4508 LQGKKIISIATGSLHCVACSDAGEVFTWGDNDEGQLGDGTVTAIQRP 4554



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 84/283 (29%), Positives = 137/283 (48%), Gaps = 9/283 (3%)

Query: 166  VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIF-RPRLVEALKGVPCKQVTAG 224
            V V++   H   +   G+V+  G+      GH   NR  + RP+LVE L G+    +  G
Sbjct: 4304 VAVNSGGKHCLALTTDGEVYAWGEGEDGKLGH--GNRMSYDRPKLVEHLNGMSVADIACG 4361

Query: 225  LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSV-VQIAAGPSYMLA 283
               +  +T  GHV T G   +G+LGHGD+ D+  PK +  L    ++ +   +G +  L 
Sbjct: 4362 SAHSAAITASGHVLTWGKGRYGRLGHGDSEDQLRPKLVEALLGYRAIDIACGSGDAQTLC 4421

Query: 284  VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 343
            +T +  V+S+G G    LG G       P  I++    G+ V++V  G +  VAL  SG 
Sbjct: 4422 ITDDDNVWSWGDGDYGKLGRGGSDGCKLPYKIESL--AGLGVIKVECGSQFSVALTKSGA 4479

Query: 344  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 403
            VYTWGKG    LGHG       P+ +++L+    + +           D G V+ +G   
Sbjct: 4480 VYTWGKGDFHRLGHGSVEHVRRPKKVAALQGKKIISIATGSLHCVACSDAGEVFTWGDND 4539

Query: 404  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT 446
             G LG    G    + RPR++ +L+  H+ +++ G  HT+ ++
Sbjct: 4540 EGQLG---DGTVTAIQRPRLVAALQGKHIVKVTCGSAHTLALS 4579



 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 87/293 (29%), Positives = 140/293 (47%), Gaps = 17/293 (5%)

Query: 178  VLQSGQVFTCGDNSSFCCGHRDT-NRPIFRPRLVEALKGVPCKQVT--AGLNFTGFLTIR 234
            V Q G+V+ CG+ ++   G   T N P+  P  +  L     K+V   +G      LT+ 
Sbjct: 3109 VSQDGKVYACGEGTNGRLGLGVTHNVPL--PHQLPVLHQYVVKKVAVHSGGKHALALTLD 3166

Query: 235  GHVHTCGSNTHGQLGHGD--TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
            G V + G    G+LGHG+  TLD+P    +        +  IA G S+  A++  G +Y+
Sbjct: 3167 GKVFSWGEGEDGKLGHGNRSTLDKP---RLVEALRAKKIRDIACGSSHSAAISSQGELYT 3223

Query: 293  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEHVVALDSSGYVYTWGKG 350
            +G G    LGHG+   +L+P+ +      G  V++V+ G  D   +AL   G V++WG G
Sbjct: 3224 WGLGEYGRLGHGDNATQLKPKLVAAL--SGRRVIQVACGSRDAQTLALTEDGAVFSWGDG 3281

Query: 351  YCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFP 410
              G LG G     + P  +  L     +Q+    + +  L   G V+ +G   +  LG  
Sbjct: 3282 DFGKLGRGGSEGSSTPHEIERLSGIGVIQIECGAQFSLALTRAGEVWTWGKGDYYRLG-- 3339

Query: 411  DRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 463
              G    V +P+ +  LR H V  ++ G  H + VTD G+++ +GDN+  Q G
Sbjct: 3340 -HGGDQHVRKPQPIAGLRGHRVIHVAVGALHCLAVTDAGQVYAWGDNDHGQQG 3391



 Score = 94.7 bits (234), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 79/284 (27%), Positives = 128/284 (45%), Gaps = 14/284 (4%)

Query: 113  NMQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTR---INFPSAAHVVQV 168
             + + +G  H L L ++  V++ G    G LGHG      +S+ R   +   +   V  +
Sbjct: 4303 KVAVNSGGKHCLALTTDGEVYAWGEGEDGKLGHGNR----MSYDRPKLVEHLNGMSVADI 4358

Query: 169  SASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFT 228
            +    H+A +  SG V T G       GH D+   + RP+LVEAL G     +  G    
Sbjct: 4359 ACGSAHSAAITASGHVLTWGKGRYGRLGHGDSEDQL-RPKLVEALLGYRAIDIACGSGDA 4417

Query: 229  GFLTIRG--HVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTG 286
              L I    +V + G   +G+LG G +     P  I  L  +G V+++  G  + +A+T 
Sbjct: 4418 QTLCITDDDNVWSWGDGDYGKLGRGGSDGCKLPYKIESLAGLG-VIKVECGSQFSVALTK 4476

Query: 287  NGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYT 346
            +G VY++G G    LGHG      +P+ +     +G  ++ ++ G  H VA   +G V+T
Sbjct: 4477 SGAVYTWGKGDFHRLGHGSVEHVRRPKKVAAL--QGKKIISIATGSLHCVACSDAGEVFT 4534

Query: 347  WGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVL 390
            WG    G LG G       P  +++L+    V+V      T  L
Sbjct: 4535 WGDNDEGQLGDGTVTAIQRPRLVAALQGKHIVKVTCGSAHTLAL 4578



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 67/238 (28%), Positives = 111/238 (46%), Gaps = 7/238 (2%)

Query: 236 HVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 295
           + ++ G     +LGHGD   R  P  I  L  V  V  +  G SY  A+T  G +Y++G 
Sbjct: 666 NAYSWGVGDSRRLGHGDCHARELPTKIESL--VRLVKSVYCGCSYSAAITLGGNLYTWGR 723

Query: 296 GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGAL 355
           G+   LGHG   D+  P  +   +   +  V + +GD H + L S G V+ WG G  G L
Sbjct: 724 GTYGRLGHGTSDDQCLPAMVMALKDHQVVDVALGSGDAHTLCLTSEGLVFAWGDGDYGKL 783

Query: 356 GHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVS 415
           G+G      LP+ +  L      +V A  + +  L   G +Y +G          +R V 
Sbjct: 784 GNGSCNSSLLPQLIDCLPR--VQRVFAGAQFSLALSCEGQLYSWGKASCLGHQLVERNVQ 841

Query: 416 DKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEP 473
              + PR++  L+   +  ++ G+ H + ++  G +FG+G N+  Q+   ++  C EP
Sbjct: 842 GCSV-PRLITGLQHKRIVDVAVGVAHCLALSSSGEIFGWGRNDNQQICPASV--CSEP 896



 Score = 92.8 bits (229), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 68/244 (27%), Positives = 111/244 (45%), Gaps = 10/244 (4%)

Query: 237  VHTCGSNTHGQLG--HGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 294
            V   G N   QLG   G  +  PT    +P       + IA G   +  V+ +G VY+ G
Sbjct: 3063 VMVWGLNDKEQLGGLKGSKVKVPT---FSPTISRLRPIHIAGGSKSLFVVSQDGKVYACG 3119

Query: 295  SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGA 354
             G+N  LG G  H+   P  +    +  +  V V +G +H +AL   G V++WG+G  G 
Sbjct: 3120 EGTNGRLGLGVTHNVPLPHQLPVLHQYVVKKVAVHSGGKHALALTLDGKVFSWGEGEDGK 3179

Query: 355  LGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGV 414
            LGHG+      P  + +L++     +      +  +   G +Y +G   +G LG  D   
Sbjct: 3180 LGHGNRSTLDKPRLVEALRAKKIRDIACGSSHSAAISSQGELYTWGLGEYGRLGHGDNAT 3239

Query: 415  SDKVLRPRILDSLRAHHVSQISTGL--YHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLE 472
                L+P+++ +L    V Q++ G     T+ +T+ G +F +GD +  +LG     G   
Sbjct: 3240 Q---LKPKLVAALSGRRVIQVACGSRDAQTLALTEDGAVFSWGDGDFGKLGRGGSEGSST 3296

Query: 473  PTEI 476
            P EI
Sbjct: 3297 PHEI 3300



 Score = 89.0 bits (219), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 75/258 (29%), Positives = 125/258 (48%), Gaps = 16/258 (6%)

Query: 224  GLNFTGFLTIRGHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSY 280
             L++ G  TI G  H    N  GQLG   G  +  PTP ++++ L  V    Q+A G   
Sbjct: 4207 ALSWGGASTIYGWGH----NHRGQLGGLEGSRIKTPTPCEALSLLRPV----QLAGGEQS 4258

Query: 281  MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 340
            + AVT +G +++ G GS   LG G       P  + + +   +  V V++G +H +AL +
Sbjct: 4259 LFAVTPDGKLFATGYGSGGRLGVGGSDSWAIPTLLGSLQHVFVKKVAVNSGGKHCLALTT 4318

Query: 341  SGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 400
             G VY WG+G  G LGHG+ +    P+ +  L       +      +  +  +G V  +G
Sbjct: 4319 DGEVYAWGEGEDGKLGHGNRMSYDRPKLVEHLNGMSVADIACGSAHSAAITASGHVLTWG 4378

Query: 401  WMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDNE 458
               +G LG  D   S+  LRP+++++L  +    I+  +G   T+ +TD   ++ +GD +
Sbjct: 4379 KGRYGRLGHGD---SEDQLRPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGD 4435

Query: 459  RAQLGHDTLRGCLEPTEI 476
              +LG     GC  P +I
Sbjct: 4436 YGKLGRGGSDGCKLPYKI 4453



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 69/250 (27%), Positives = 123/250 (49%), Gaps = 15/250 (6%)

Query: 207 PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 266
           P  +E+L  +  K V  G +++  +T+ G+++T G  T+G+LGHG + D+  P  +  L+
Sbjct: 689 PTKIESLVRL-VKSVYCGCSYSAAITLGGNLYTWGRGTYGRLGHGTSDDQCLPAMVMALK 747

Query: 267 EVGSV-VQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHV 325
           +   V V + +G ++ L +T  G+V+++G G    LG+G  +  L P+ I    R    V
Sbjct: 748 DHQVVDVALGSGDAHTLCLTSEGLVFAWGDGDYGKLGNGSCNSSLLPQLIDCLPR----V 803

Query: 326 VRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK-----TLPEPLSSLKSHLAVQV 380
            RV AG +  +AL   G +Y+WGK  C  LGH   +++     ++P  ++ L+    V V
Sbjct: 804 QRVFAGAQFSLALSCEGQLYSWGKASC--LGH-QLVERNVQGCSVPRLITGLQHKRIVDV 860

Query: 381 CARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLY 440
                    L  +G ++G+G      +  P    S+ +LR  I  +L     S I+    
Sbjct: 861 AVGVAHCLALSSSGEIFGWGRNDNQQI-CPASVCSEPLLRQPIQVTLPTLPASGIACTAA 919

Query: 441 HTVVVTDRGR 450
            +++ T   R
Sbjct: 920 QSLIWTQSTR 929



 Score = 46.6 bits (109), Expect = 0.028,   Method: Compositional matrix adjust.
 Identities = 45/184 (24%), Positives = 83/184 (45%), Gaps = 13/184 (7%)

Query: 121 YHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHV-VQVSASENHAAFVL 179
           Y   +    ++++ G    G LGHG    QC+    +       V V + + + H   + 
Sbjct: 708 YSAAITLGGNLYTWGRGTYGRLGHGTSDDQCLPAMVMALKDHQVVDVALGSGDAHTLCLT 767

Query: 180 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 239
             G VF  GD      G+   N  +  P+L++ L  V  ++V AG  F+  L+  G +++
Sbjct: 768 SEGLVFAWGDGDYGKLGNGSCNSSLL-PQLIDCLPRV--QRVFAGAQFSLALSCEGQLYS 824

Query: 240 CGSNTHGQLGHGDTLDR-----PTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 294
            G  +   LGH   ++R       P+ I  L+    +V +A G ++ LA++ +G ++ +G
Sbjct: 825 WGKASC--LGH-QLVERNVQGCSVPRLITGLQH-KRIVDVAVGVAHCLALSSSGEIFGWG 880

Query: 295 SGSN 298
              N
Sbjct: 881 RNDN 884



 Score = 44.3 bits (103), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 35/135 (25%), Positives = 63/135 (46%), Gaps = 5/135 (3%)

Query: 332  DEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 391
            D+  ++   +  +Y WG  + G LG  +      P P  +L     VQ+   ++  F + 
Sbjct: 4204 DDWALSWGGASTIYGWGHNHRGQLGGLEGSRIKTPTPCEALSLLRPVQLAGGEQSLFAVT 4263

Query: 392  DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRG 449
              G ++     G+GS G    G SD    P +L SL+   V +++  +G  H + +T  G
Sbjct: 4264 PDGKLFA---TGYGSGGRLGVGGSDSWAIPTLLGSLQHVFVKKVAVNSGGKHCLALTTDG 4320

Query: 450  RLFGFGDNERAQLGH 464
             ++ +G+ E  +LGH
Sbjct: 4321 EVYAWGEGEDGKLGH 4335


>gi|432092257|gb|ELK24881.1| Putative E3 ubiquitin-protein ligase HERC1 [Myotis davidii]
          Length = 4856

 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 101/345 (29%), Positives = 166/345 (48%), Gaps = 20/345 (5%)

Query: 115  QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQV---SA 170
            Q+  G+  T +I +N +V +CG    G LG G      V  T I+      V Q+     
Sbjct: 4017 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHV-LTVISALQGFVVTQLVTSCG 4075

Query: 171  SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
            S+ H+  + +SG+VF+ GD      GH +++R   RPR +EAL+G    Q++ G   +  
Sbjct: 4076 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQMSCGFKHSAV 4134

Query: 231  LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGS------VVQIAAGPSYML 282
            +T  G + T G+  +G+LG G+T ++  P+ +  LE  ++G       +  +A G ++ L
Sbjct: 4135 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQARNKSIICSVACGLNHTL 4194

Query: 283  AVTGNG-VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 341
            AV+ +G +V++FG G    LG G    +  P+ +      GI + +V+ G +  VAL   
Sbjct: 4195 AVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVL--CGIGIKKVACGTQFSVALTKD 4252

Query: 342  GYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGW 401
            G VYT+G+     L  G   +   P+ +  L   +   V      T  L  TG +Y +G 
Sbjct: 4253 GQVYTFGQDRLIGLPEGRARNHNRPQQVPVLAGVVIEDVAVGAEHTLALTSTGDIYAWGS 4312

Query: 402  MGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT 446
               G LG    G ++ V  P ++  L+  +V QIS G  H+   T
Sbjct: 4313 NSEGQLGL---GHTNHVREPTLVTVLQGKNVRQISAGRCHSAAWT 4354



 Score =  102 bits (255), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 106/379 (27%), Positives = 165/379 (43%), Gaps = 29/379 (7%)

Query: 96  FLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFT 155
           F +    +SD   T A    I TG    ++     V+  GS+    L  G   TQ     
Sbjct: 340 FEEVCRMASDYSRTCASPDSIQTGDA-PIVSETCEVYVWGSNSSHQLVEG---TQEKILQ 395

Query: 156 RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTN------RPIFRPRL 209
               PS +    + A +     +   G V  CG  S    G  D+N      +  F P  
Sbjct: 396 PKLAPSFSDAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPH- 454

Query: 210 VEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG 269
             ++K V   + + G   T   T  G V + G   +G+LGHG++  +  PK I    +  
Sbjct: 455 -RSIKKVSSSKGSDG--HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGK 511

Query: 270 SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS 329
            VV ++AG  +  AVT +G +Y++G G    LGHG+ +     R I T  +   +V  VS
Sbjct: 512 VVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNS----RNIPTLVKDISNVGEVS 567

Query: 330 AGDEHVVALDSSGY-VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTF 388
            G  H +AL   G  V+++G G  G LGHGD      P+ + +L+     +VCA  + + 
Sbjct: 568 CGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSL 627

Query: 389 VLVDTGSVYGFG---WMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVV 445
            L  TG VY +G    +G GS            LRP++++ L A  +  IS G  H + +
Sbjct: 628 SLTSTGQVYAWGCGACLGCGS-------SEATALRPKLIEELAATRIVDISIGDSHCLAL 680

Query: 446 TDRGRLFGFGDNERAQLGH 464
           +    ++ +G+N   Q G 
Sbjct: 681 SHDNEVYAWGNNSMGQCGQ 699



 Score = 96.3 bits (238), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 90/332 (27%), Positives = 151/332 (45%), Gaps = 20/332 (6%)

Query: 160  PSAAHVVQVSASENHAAFVLQS-GQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPC 218
            PS +   QV   +N   FV+Q+ G V  CG+ S    G  +++  +    ++ AL+G   
Sbjct: 4010 PSFSQAQQVICGQN-CTFVIQANGTVLACGEGSYGRLGQGNSDD-LHVLTVISALQGFVV 4067

Query: 219  KQVTAGLNFTGF---LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA 275
             Q+       G    LT  G V + G   +G+LGHG++  +  P+ I  L+    VVQ++
Sbjct: 4068 TQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQG-EEVVQMS 4126

Query: 276  AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTF--------RRKGIHVVR 327
             G  +   VT +G +++FG+G    LG G   ++  P  +           R K I +  
Sbjct: 4127 CGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQARNKSI-ICS 4185

Query: 328  VSAGDEHVVALDSSG-YVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRK 386
            V+ G  H +A+ + G  V+ +G G  G LG G+   K+ P+ +  L      +V    + 
Sbjct: 4186 VACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQF 4245

Query: 387  TFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT 446
            +  L   G VY FG      +G P+ G +    RP+ +  L    +  ++ G  HT+ +T
Sbjct: 4246 SVALTKDGQVYTFGQDRL--IGLPE-GRARNHNRPQQVPVLAGVVIEDVAVGAEHTLALT 4302

Query: 447  DRGRLFGFGDNERAQLGHDTLRGCLEPTEIFI 478
              G ++ +G N   QLG        EPT + +
Sbjct: 4303 STGDIYAWGSNSEGQLGLGHTNHVREPTLVTV 4334



 Score = 91.7 bits (226), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 90/266 (33%), Positives = 128/266 (48%), Gaps = 14/266 (5%)

Query: 122 HTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
           HTL   +   VFS G    G LGHG  +TQ              VV VSA   H+A V +
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528

Query: 181 SGQVFTCGDNSSFCCGHRDTN-RPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH-VH 238
            G+++T G+      GH D+N R I  P LV+ +  V   +V+ G + T  L+  G  V 
Sbjct: 529 DGELYTWGEGDFGRLGHGDSNSRNI--PTLVKDISNV--GEVSCGSSHTIALSKDGRTVW 584

Query: 239 TCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
           + G   +G+LGHGDT     PK I  L+ +  + ++ AG    L++T  G VY++G G+ 
Sbjct: 585 SFGGGDNGKLGHGDTNRVYKPKVIEALQGM-FIRKVCAGSQSSLSLTSTGQVYAWGCGA- 642

Query: 299 FCLGHG-EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 357
            CLG G  +   L+P+ I+        +V +S GD H +AL     VY WG    G  G 
Sbjct: 643 -CLGCGSSEATALRPKLIEEL--AATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQ 699

Query: 358 GDEIDK-TLPEPLSSLKSHLAVQVCA 382
           G+     T P+ +S L      QV A
Sbjct: 700 GNSTGPITKPKKVSGLDGIAIQQVSA 725



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 68/239 (28%), Positives = 108/239 (45%), Gaps = 20/239 (8%)

Query: 237  VHTCGSNTHGQLGH-GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 295
            V+  G+  HGQL   G  +  P   + AP        Q+  G +    +  NG V + G 
Sbjct: 3985 VYLWGAGRHGQLAEAGRNVMVP---AAAP--SFSQAQQVICGQNCTFVIQANGTVLACGE 4039

Query: 296  GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG-DEHVVALDSSGYVYTWGKGYCGA 354
            GS   LG G   D      I   +   +  +  S G D H +AL  SG V++WG G  G 
Sbjct: 4040 GSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGK 4099

Query: 355  LGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGV 414
            LGHG+   +  P  + +L+    VQ+    + + V+   G ++ FG   +G LG  +   
Sbjct: 4100 LGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN--T 4157

Query: 415  SDKVLRPRILDSLRAHHVSQ---------ISTGLYHTVVVTDRGRL-FGFGDNERAQLG 463
            S+K L P  + +L  + + Q         ++ GL HT+ V+  G + + FGD +  +LG
Sbjct: 4158 SNKKL-PERVTALEGYQIGQARNKSIICSVACGLNHTLAVSADGSMVWAFGDGDYGKLG 4215



 Score = 48.9 bits (115), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 41/143 (28%), Positives = 67/143 (46%), Gaps = 9/143 (6%)

Query: 344  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 403
            VY WG G  G L    E  + +  P ++     A QV   +  TFV+   G+V   G   
Sbjct: 3985 VYLWGAGRHGQLA---EAGRNVMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGS 4041

Query: 404  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLY---HTVVVTDRGRLFGFGDNERA 460
            +G LG   +G SD +    ++ +L+   V+Q+ T      H++ +T+ G +F +GD +  
Sbjct: 4042 YGRLG---QGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYG 4098

Query: 461  QLGHDTLRGCLEPTEIFIQEMEE 483
            +LGH        P +I   + EE
Sbjct: 4099 KLGHGNSDRQRRPRQIEALQGEE 4121



 Score = 47.0 bits (110), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 27/94 (28%), Positives = 46/94 (48%), Gaps = 2/94 (2%)

Query: 131 VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDN 190
           V++ G   C  LG G      +    I   +A  +V +S  ++H   +    +V+  G+N
Sbjct: 635 VYAWGCGAC--LGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNN 692

Query: 191 SSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           S   CG  ++  PI +P+ V  L G+  +QV+AG
Sbjct: 693 SMGQCGQGNSTGPITKPKKVSGLDGIAIQQVSAG 726


>gi|440904419|gb|ELR54939.1| Putative E3 ubiquitin-protein ligase HERC6, partial [Bos grunniens
           mutus]
          Length = 1019

 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 84/248 (33%), Positives = 124/248 (50%), Gaps = 5/248 (2%)

Query: 220 QVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPS 279
           Q  +G + +  L   G V +CG N+ GQLG   T     P+ I  LE +  V  ++ G  
Sbjct: 27  QAASGEHHSLLLLSDGTVQSCGDNSRGQLGRKGTPRGEQPERIPALETL-HVALVSCGKE 85

Query: 280 YMLAVTGNGVVYSFGSGSNFCLGHGE-QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
           + LAV   G V+++G+ S   LG GE +     P+ I+T    GI +++V+ G  H VAL
Sbjct: 86  HSLAVCHKGRVFAWGAASEGQLGIGEFKETTFIPKKIKTL--AGIKIIQVACGHYHSVAL 143

Query: 339 DSSGYVYTWGKGYCGALGHGDEI-DKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVY 397
              G V++WG    G LG G E   +  P+ + SL+     QV A    +F L  +G+ +
Sbjct: 144 SEDGQVFSWGTNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGHHSFALSLSGTSF 203

Query: 398 GFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDN 457
           G+G    G L         +  +P  + +L+   V  IS G  HT V+T  G++F FGDN
Sbjct: 204 GWGSNNAGQLALSGNNAPVQRYKPVSIGALKTLGVVSISCGYKHTAVLTQDGKVFTFGDN 263

Query: 458 ERAQLGHD 465
              QLGHD
Sbjct: 264 SYGQLGHD 271



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 84/297 (28%), Positives = 151/297 (50%), Gaps = 14/297 (4%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           ++Q ++ E+H+  +L  G V +CGDNS    G + T R   +P  + AL+ +    V+ G
Sbjct: 25  LLQAASGEHHSLLLLSDGTVQSCGDNSRGQLGRKGTPRGE-QPERIPALETLHVALVSCG 83

Query: 225 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRP-TPKSIAPLEEVGSVVQIAAGPSYMLA 283
              +  +  +G V   G+ + GQLG G+  +    PK I  L  +  ++Q+A G  + +A
Sbjct: 84  KEHSLAVCHKGRVFAWGAASEGQLGIGEFKETTFIPKKIKTLAGI-KIIQVACGHYHSVA 142

Query: 284 VTGNGVVYSFGSGSNFCLGHGEQH-DELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
           ++ +G V+S+G+ S+  LG G++   +  P+ +++   +GI + +V+AG  H  AL  SG
Sbjct: 143 LSEDGQVFSWGTNSHGQLGLGKEFPSQASPQRVRSL--EGIPLAQVAAGGHHSFALSLSG 200

Query: 343 YVYTWGKGYCGAL---GHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGF 399
             + WG    G L   G+   + +  P  + +LK+   V +    + T VL   G V+ F
Sbjct: 201 TSFGWGSNNAGQLALSGNNAPVQRYKPVSIGALKTLGVVSISCGYKHTAVLTQDGKVFTF 260

Query: 400 GWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV-VTDRGRLFGFG 455
           G   +G LG      + +   P++++ +    VSQI  G  HT+  +   G++  FG
Sbjct: 261 GDNSYGQLG---HDPTAEKRGPQLVERIEG-LVSQIDCGSDHTLAYIYTTGQVVSFG 313



 Score = 99.8 bits (247), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 88/296 (29%), Positives = 136/296 (45%), Gaps = 17/296 (5%)

Query: 114 MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHG--PETTQCVSFTRINFPSAAHVVQVSA 170
           +Q  +G +H+LL+ S+ +V SCG +  G LG    P   Q     RI      HV  VS 
Sbjct: 26  LQAASGEHHSLLLLSDGTVQSCGDNSRGQLGRKGTPRGEQP---ERIPALETLHVALVSC 82

Query: 171 SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
            + H+  V   G+VF  G  S    G  +     F P+ ++ L G+   QV  G   +  
Sbjct: 83  GKEHSLAVCHKGRVFAWGAASEGQLGIGEFKETTFIPKKIKTLAGIKIIQVACGHYHSVA 142

Query: 231 LTIRGHVHTCGSNTHGQLGHGDTL-DRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 289
           L+  G V + G+N+HGQLG G     + +P+ +  LE +  + Q+AAG  +  A++ +G 
Sbjct: 143 LSEDGQVFSWGTNSHGQLGLGKEFPSQASPQRVRSLEGI-PLAQVAAGGHHSFALSLSGT 201

Query: 290 VYSFGSGSNFC-----LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
             SFG GSN        G+       +P +I   +  G  VV +S G +H   L   G V
Sbjct: 202 --SFGWGSNNAGQLALSGNNAPVQRYKPVSIGALKTLG--VVSISCGYKHTAVLTQDGKV 257

Query: 345 YTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 400
           +T+G    G LGH    +K  P+ +  ++  ++   C        +  TG V  FG
Sbjct: 258 FTFGDNSYGQLGHDPTAEKRGPQLVERIEGLVSQIDCGSDHTLAYIYTTGQVVSFG 313


>gi|354485549|ref|XP_003504946.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6-like
           [Cricetulus griseus]
          Length = 887

 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 84/264 (31%), Positives = 135/264 (51%), Gaps = 9/264 (3%)

Query: 206 RPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL 265
           +PR +    G+   Q  +G   +  L     V++CG N+ GQLG     +   P+   P+
Sbjct: 11  QPRRLNGRDGLELLQAASGERHSLLLFSNHRVYSCGDNSLGQLGQKREQNTEQPE---PI 67

Query: 266 EEVGS--VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGE-QHDELQPRAIQTFRRKG 322
           + +G+  +  ++ G  + +AV   G V+++G+GS   LG GE +   L P  I+T    G
Sbjct: 68  QALGTLDIDLVSCGKEHSIAVCHKGRVFAWGAGSEGQLGIGEFKEINLMPMRIKTL--GG 125

Query: 323 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG-DEIDKTLPEPLSSLKSHLAVQVC 381
           I +++VS G  H +AL   G V++WGK   G LG G     +  P+ ++SL+     QV 
Sbjct: 126 IKIIQVSCGHYHSLALSEDGQVFSWGKNSQGQLGLGMQSSSQASPQKVTSLEGIPLAQVA 185

Query: 382 ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYH 441
           A    +F L  TG+ YG+G    G L       + ++ +P  +D+L+   V  IS G  H
Sbjct: 186 AGGSHSFALSLTGTSYGWGSNSVGQLALSGENSTVQISKPHSIDALKNLGVIYISCGYEH 245

Query: 442 TVVVTDRGRLFGFGDNERAQLGHD 465
           T V+T  G++F FGDN   QL ++
Sbjct: 246 TAVLTKDGQVFTFGDNSSGQLQNN 269



 Score = 99.0 bits (245), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 86/311 (27%), Positives = 148/311 (47%), Gaps = 16/311 (5%)

Query: 156 RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEALK 214
           R+N      ++Q ++ E H+  +  + +V++CGDNS    G  R+ N    +P  ++AL 
Sbjct: 14  RLNGRDGLELLQAASGERHSLLLFSNHRVYSCGDNSLGQLGQKREQNTE--QPEPIQALG 71

Query: 215 GVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLD-RPTPKSIAPLEEVGSVVQ 273
            +    V+ G   +  +  +G V   G+ + GQLG G+  +    P  I  L  +  ++Q
Sbjct: 72  TLDIDLVSCGKEHSIAVCHKGRVFAWGAGSEGQLGIGEFKEINLMPMRIKTLGGI-KIIQ 130

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ-HDELQPRAIQTFRRKGIHVVRVSAGD 332
           ++ G  + LA++ +G V+S+G  S   LG G Q   +  P+ + +   +GI + +V+AG 
Sbjct: 131 VSCGHYHSLALSEDGQVFSWGKNSQGQLGLGMQSSSQASPQKVTSL--EGIPLAQVAAGG 188

Query: 333 EHVVALDSSGYVYTWGKGYCGAL---GHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFV 389
            H  AL  +G  Y WG    G L   G    +  + P  + +LK+   + +      T V
Sbjct: 189 SHSFALSLTGTSYGWGSNSVGQLALSGENSTVQISKPHSIDALKNLGVIYISCGYEHTAV 248

Query: 390 LVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV-VTDR 448
           L   G V+ FG    G L    RG   K   P++++ ++   VS+I  G YHT+  V   
Sbjct: 249 LTKDGQVFTFGDNSSGQLQNNPRG---KRRGPQLVEGIKG-QVSKIECGSYHTIAYVYTT 304

Query: 449 GRLFGFGDNER 459
           G++   G   R
Sbjct: 305 GQVVSLGHGPR 315



 Score = 92.8 bits (229), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 82/299 (27%), Positives = 131/299 (43%), Gaps = 23/299 (7%)

Query: 114 MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHV 165
           +Q  +G  H+LL+ SN  V+SCG +  G LG         PE  Q +    I+       
Sbjct: 24  LQAASGERHSLLLFSNHRVYSCGDNSLGQLGQKREQNTEQPEPIQALGTLDIDL------ 77

Query: 166 VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 225
             VS  + H+  V   G+VF  G  S    G  +       P  ++ L G+   QV+ G 
Sbjct: 78  --VSCGKEHSIAVCHKGRVFAWGAGSEGQLGIGEFKEINLMPMRIKTLGGIKIIQVSCGH 135

Query: 226 NFTGFLTIRGHVHTCGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 284
             +  L+  G V + G N+ GQLG G  +  + +P+ +  LE +  + Q+AAG S+  A+
Sbjct: 136 YHSLALSEDGQVFSWGKNSQGQLGLGMQSSSQASPQKVTSLEGI-PLAQVAAGGSHSFAL 194

Query: 285 TGNGVVYSFGSGSNFCLGHGEQHDELQ---PRAIQTFRRKGIHVVRVSAGDEHVVALDSS 341
           +  G  Y +GS S   L    ++  +Q   P +I   +  G  V+ +S G EH   L   
Sbjct: 195 SLTGTSYGWGSNSVGQLALSGENSTVQISKPHSIDALKNLG--VIYISCGYEHTAVLTKD 252

Query: 342 GYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 400
           G V+T+G    G L +     +  P+ +  +K  ++   C        +  TG V   G
Sbjct: 253 GQVFTFGDNSSGQLQNNPRGKRRGPQLVEGIKGQVSKIECGSYHTIAYVYTTGQVVSLG 311



 Score = 68.9 bits (167), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 44/156 (28%), Positives = 78/156 (50%), Gaps = 4/156 (2%)

Query: 308 DELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPE 367
           D  QPR +    R G+ +++ ++G+ H + L S+  VY+ G    G LG   E +   PE
Sbjct: 8   DSRQPRRLNG--RDGLELLQAASGERHSLLLFSNHRVYSCGDNSLGQLGQKREQNTEQPE 65

Query: 368 PLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSL 427
           P+ +L +     V   K  +  +   G V+ +G    G LG  +    +  L P  + +L
Sbjct: 66  PIQALGTLDIDLVSCGKEHSIAVCHKGRVFAWGAGSEGQLGIGE--FKEINLMPMRIKTL 123

Query: 428 RAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 463
               + Q+S G YH++ +++ G++F +G N + QLG
Sbjct: 124 GGIKIIQVSCGHYHSLALSEDGQVFSWGKNSQGQLG 159


>gi|351698259|gb|EHB01178.1| Putative E3 ubiquitin-protein ligase HERC1, partial [Heterocephalus
            glaber]
          Length = 3493

 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 101/343 (29%), Positives = 166/343 (48%), Gaps = 18/343 (5%)

Query: 115  QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQV---SA 170
            Q+  G+  T +I +N +V +CG    G LG G      V  T I+      V Q+     
Sbjct: 2656 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHV-LTVISALQGFVVTQLVTSCG 2714

Query: 171  SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
            S+ H+  + +SG+VF+ GD      GH +++R   RPR +EAL+G    Q++ G   +  
Sbjct: 2715 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQMSCGFKHSAV 2773

Query: 231  LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSV----VQIAAGPSYMLAV 284
            +T  G + T G+  +G+LG G+T ++  P+ +  LE  ++G        +A G ++ LAV
Sbjct: 2774 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQAWNKSYSVACGLNHTLAV 2833

Query: 285  TGNG-VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 343
            + +G +V++FG G    LG G    +  P+ +      GI + +V+ G +  VAL   G+
Sbjct: 2834 STDGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVL--CGIGIKKVACGTQFSVALTKDGH 2891

Query: 344  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 403
            VYT+G+     L  G   +   P+ +  L   +   V      T  L  TG VY +G   
Sbjct: 2892 VYTFGQDRLIGLPEGRARNHNRPQQVPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNS 2951

Query: 404  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT 446
             G LG    G ++ V  P ++  L+  ++ QIS G  H+   T
Sbjct: 2952 EGQLGL---GHTNHVREPTLVTVLQGKNIRQISAGRCHSAAWT 2991



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 87/329 (26%), Positives = 147/329 (44%), Gaps = 16/329 (4%)

Query: 160  PSAAHVVQVSASENHAAFVLQS-GQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPC 218
            PS +   QV   +N   FV+Q+ G V  CG+ S    G  +++  +    ++ AL+G   
Sbjct: 2649 PSFSQAQQVICGQN-CTFVIQANGTVLACGEGSYGRLGQGNSDD-LHVLTVISALQGFVV 2706

Query: 219  KQVTAGLNFTGF---LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA 275
             Q+       G    LT  G V + G   +G+LGHG++  +  P+ I  L+    VVQ++
Sbjct: 2707 TQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQG-EEVVQMS 2765

Query: 276  AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGI-----HVVRVSA 330
             G  +   VT +G +++FG+G    LG G   ++  P  +       I         V+ 
Sbjct: 2766 CGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQAWNKSYSVAC 2825

Query: 331  GDEHVVALDSSG-YVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFV 389
            G  H +A+ + G  V+ +G G  G LG G+   K+ P+ +  L      +V    + +  
Sbjct: 2826 GLNHTLAVSTDGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVA 2885

Query: 390  LVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRG 449
            L   G VY FG      +G P+ G +    RP+ +  L    +  ++ G  HT+ +   G
Sbjct: 2886 LTKDGHVYTFGQDRL--IGLPE-GRARNHNRPQQVPVLAGVVIEDVAVGAEHTLALASTG 2942

Query: 450  RLFGFGDNERAQLGHDTLRGCLEPTEIFI 478
             ++ +G N   QLG        EPT + +
Sbjct: 2943 DVYAWGSNSEGQLGLGHTNHVREPTLVTV 2971



 Score = 77.4 bits (189), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 69/237 (29%), Positives = 107/237 (45%), Gaps = 18/237 (7%)

Query: 237  VHTCGSNTHGQLGH-GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 295
            V   G+  HGQL   G  +  P   + AP        Q+  G +    +  NG V + G 
Sbjct: 2624 VFLWGAGRHGQLAEAGRNVMVP---AAAP--SFSQAQQVICGQNCTFVIQANGTVLACGE 2678

Query: 296  GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG-DEHVVALDSSGYVYTWGKGYCGA 354
            GS   LG G   D      I   +   +  +  S G D H +AL  SG V++WG G  G 
Sbjct: 2679 GSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGK 2738

Query: 355  LGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGV 414
            LGHG+   +  P  + +L+    VQ+    + + V+   G ++ FG   +G LG  +   
Sbjct: 2739 LGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN--T 2796

Query: 415  SDKVLRPRILDSLRAHHVSQ-------ISTGLYHTVVV-TDRGRLFGFGDNERAQLG 463
            S+K L P  + +L  + + Q       ++ GL HT+ V TD   ++ FGD +  +LG
Sbjct: 2797 SNKKL-PERVTALEGYQIGQAWNKSYSVACGLNHTLAVSTDGSMVWAFGDGDYGKLG 2852



 Score = 47.4 bits (111), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 40/143 (27%), Positives = 67/143 (46%), Gaps = 9/143 (6%)

Query: 344  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 403
            V+ WG G  G L    E  + +  P ++     A QV   +  TFV+   G+V   G   
Sbjct: 2624 VFLWGAGRHGQLA---EAGRNVMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGS 2680

Query: 404  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLY---HTVVVTDRGRLFGFGDNERA 460
            +G LG   +G SD +    ++ +L+   V+Q+ T      H++ +T+ G +F +GD +  
Sbjct: 2681 YGRLG---QGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYG 2737

Query: 461  QLGHDTLRGCLEPTEIFIQEMEE 483
            +LGH        P +I   + EE
Sbjct: 2738 KLGHGNSDRQRRPRQIEALQGEE 2760


>gi|148223431|ref|NP_001085755.1| HECT and RLD domain containing E3 ubiquitin protein ligase family
           member 6 [Xenopus laevis]
 gi|49115314|gb|AAH73297.1| MGC80684 protein [Xenopus laevis]
          Length = 1028

 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 83/250 (33%), Positives = 132/250 (52%), Gaps = 8/250 (3%)

Query: 219 KQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGP 278
           ++V+ G   + +L   G + +CG N +GQLG      R   + I+ LE   ++V ++ G 
Sbjct: 37  QKVSIGEKHSLYLLKDGTLLSCGQNPYGQLGRKGNNSRI--EQISSLE-AQTIVDVSCGT 93

Query: 279 SYMLAVTGNGVVYSFGSGSNFCLGHGE-QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
           ++ +A+   G +YS+G GS   LG G+       P+ I     + I  +++S G+ H VA
Sbjct: 94  NHSVAMCDEGNIYSWGDGSEGQLGTGKFSSKNFTPKRITGLLNRKI--IQISCGNFHSVA 151

Query: 338 LDSSGYVYTWGKGYCGALGHGDEI-DKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSV 396
           L   G V++WG+  CG LG G +I ++  P+ + SLK    VQV A   +TF L  +G+V
Sbjct: 152 LAEDGRVFSWGQNKCGQLGLGSQIINQATPQLVKSLKGIPLVQVTAGGSQTFALSMSGTV 211

Query: 397 YGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGD 456
           + +G    G LGF +        +P  +DSLR   V+ IS G  HT V+   G ++ FGD
Sbjct: 212 FAWGRNNAGQLGFKNDA-KKGTFKPYAVDSLRDLGVAYISCGEEHTAVLNKDGIVYTFGD 270

Query: 457 NERAQLGHDT 466
           +   QLG  +
Sbjct: 271 DTYGQLGQQS 280



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 96/341 (28%), Positives = 163/341 (47%), Gaps = 16/341 (4%)

Query: 131 VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ-VSASENHAAFVLQSGQVFTCGD 189
           ++  G +  G L    E  + V F   ++      VQ VS  E H+ ++L+ G + +CG 
Sbjct: 1   MYCWGDNCFGQLAVLEEEKEVVHFKENDYFQKKESVQKVSIGEKHSLYLLKDGTLLSCGQ 60

Query: 190 NSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLG 249
           N     G +  N    R   + +L+      V+ G N +  +   G++++ G  + GQLG
Sbjct: 61  NPYGQLGRKGNNS---RIEQISSLEAQTIVDVSCGTNHSVAMCDEGNIYSWGDGSEGQLG 117

Query: 250 HGDTLDRP-TPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH- 307
            G    +  TPK I  L     ++QI+ G  + +A+  +G V+S+G      LG G Q  
Sbjct: 118 TGKFSSKNFTPKRITGLLN-RKIIQISCGNFHSVALAEDGRVFSWGQNKCGQLGLGSQII 176

Query: 308 DELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPE 367
           ++  P+ +++   KGI +V+V+AG     AL  SG V+ WG+   G LG  ++  K   +
Sbjct: 177 NQATPQLVKSL--KGIPLVQVTAGGSQTFALSMSGTVFAWGRNNAGQLGFKNDAKKGTFK 234

Query: 368 P--LSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILD 425
           P  + SL+      +   +  T VL   G VY FG   +G LG   +   ++   P+ ++
Sbjct: 235 PYAVDSLRDLGVAYISCGEEHTAVLNKDGIVYTFGDDTYGQLG---QQSGNQTSVPQKIE 291

Query: 426 SLRAHHVSQISTGLYHTVV-VTDRGRLFGFGDNERAQLGHD 465
              +  VSQ++ G YHT++ V    R+  FG   + Q G+D
Sbjct: 292 EY-SRQVSQVACGRYHTLLYVFTCNRIVSFGKGSQRQQGND 331



 Score = 98.2 bits (243), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 75/301 (24%), Positives = 136/301 (45%), Gaps = 10/301 (3%)

Query: 104 SDIVETSAGNMQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSA 162
           +D  +      +++ G  H+L L+ + ++ SCG +  G LG     ++     +I+   A
Sbjct: 27  NDYFQKKESVQKVSIGEKHSLYLLKDGTLLSCGQNPYGQLGRKGNNSR---IEQISSLEA 83

Query: 163 AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 222
             +V VS   NH+  +   G +++ GD S    G    +   F P+ +  L      Q++
Sbjct: 84  QTIVDVSCGTNHSVAMCDEGNIYSWGDGSEGQLGTGKFSSKNFTPKRITGLLNRKIIQIS 143

Query: 223 AGLNFTGFLTIRGHVHTCGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 281
            G   +  L   G V + G N  GQLG G   +++ TP+ +  L+ +  +VQ+ AG S  
Sbjct: 144 CGNFHSVALAEDGRVFSWGQNKCGQLGLGSQIINQATPQLVKSLKGI-PLVQVTAGGSQT 202

Query: 282 LAVTGNGVVYSFGSGSNFCLG--HGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 339
            A++ +G V+++G  +   LG  +  +    +P A+ + R  G  V  +S G+EH   L+
Sbjct: 203 FALSMSGTVFAWGRNNAGQLGFKNDAKKGTFKPYAVDSLRDLG--VAYISCGEEHTAVLN 260

Query: 340 SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGF 399
             G VYT+G    G LG       ++P+ +      ++   C R      +     +  F
Sbjct: 261 KDGIVYTFGDDTYGQLGQQSGNQTSVPQKIEEYSRQVSQVACGRYHTLLYVFTCNRIVSF 320

Query: 400 G 400
           G
Sbjct: 321 G 321



 Score = 86.3 bits (212), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 71/265 (26%), Positives = 130/265 (49%), Gaps = 14/265 (5%)

Query: 114 MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           + ++ G  H++ + +  +++S G    G LG G  +++  +  RI       ++Q+S   
Sbjct: 87  VDVSCGTNHSVAMCDEGNIYSWGDGSEGQLGTGKFSSKNFTPKRITGLLNRKIIQISCGN 146

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFR---PRLVEALKGVPCKQVTAGLNFTG 229
            H+  + + G+VF+ G N    CG       I     P+LV++LKG+P  QVTAG + T 
Sbjct: 147 FHSVALAEDGRVFSWGQNK---CGQLGLGSQIINQATPQLVKSLKGIPLVQVTAGGSQTF 203

Query: 230 FLTIRGHVHTCGSNTHGQLGHGDTLDRPT--PKSIAPLEEVGSVVQIAAGPSYMLAVTGN 287
            L++ G V   G N  GQLG  +   + T  P ++  L ++G V  I+ G  +   +  +
Sbjct: 204 ALSMSGTVFAWGRNNAGQLGFKNDAKKGTFKPYAVDSLRDLG-VAYISCGEEHTAVLNKD 262

Query: 288 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEH-VVALDSSGYVYT 346
           G+VY+FG  +   LG    +    P+ I+ + R+   V +V+ G  H ++ + +   + +
Sbjct: 263 GIVYTFGDDTYGQLGQQSGNQTSVPQKIEEYSRQ---VSQVACGRYHTLLYVFTCNRIVS 319

Query: 347 WGKGYCGALGHGDEIDKTLPEPLSS 371
           +GKG     G+ +  D+     L S
Sbjct: 320 FGKGSQRQQGNDESSDQAEASQLPS 344


>gi|195060098|ref|XP_001995753.1| GH17927 [Drosophila grimshawi]
 gi|193896539|gb|EDV95405.1| GH17927 [Drosophila grimshawi]
          Length = 4933

 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 99/324 (30%), Positives = 154/324 (47%), Gaps = 18/324 (5%)

Query: 128  NSSVFSCGSSLCGVLGHGPETTQCVSFTR---INFPSAAHVVQVSASENHAAFVLQSGQV 184
            +  VF+CG    G LG G   T  V       +        V V +   HA  +   G+V
Sbjct: 2963 DGKVFACGEGTNGRLGLG--VTHNVPLPHQLPVLHQYVVKKVAVHSGGKHALALTLDGKV 3020

Query: 185  FTCGDNSSFCCGHRDTNRPIF-RPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 243
            F+ G+      GH   NR    +PRLVEAL+    + +  G + +  ++ +G ++T G  
Sbjct: 3021 FSWGEGEDGKLGH--GNRTTLDKPRLVEALRAKKIRDIACGSSHSAAISSQGELYTWGLG 3078

Query: 244  THGQLGHGDTLDRPTPKSIAPLEEVGS-VVQIAAGP--SYMLAVTGNGVVYSFGSGSNFC 300
             +G+LGHGD   +  PK +  L   GS V+Q+A G   +  LA+T +G V+S+G G    
Sbjct: 3079 EYGRLGHGDNATQLKPKLVTAL--CGSRVIQVACGSRDAQTLALTEDGAVFSWGDGDFGK 3136

Query: 301  LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 360
            LG G       P  I+  R  GI VV++  G +  +AL  +G V+TWGKG    LGHG +
Sbjct: 3137 LGRGGSEGSATPHEIE--RLSGIGVVQIECGAQFSLALTRAGEVWTWGKGDYYRLGHGGD 3194

Query: 361  IDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLR 420
                 P+P++ L+    + V         + D G VY +G    G  G  +  V+ K   
Sbjct: 3195 QHVRKPQPIAGLRGRRVIHVAVGALHCLAVTDAGQVYAWGDNDHGQQGSGNTFVNKK--- 3251

Query: 421  PRILDSLRAHHVSQISTGLYHTVV 444
            P ++  L A  V++++ G  H++ 
Sbjct: 3252 PALVIGLDAVFVNRVACGSSHSMA 3275



 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 101/347 (29%), Positives = 162/347 (46%), Gaps = 8/347 (2%)

Query: 129  SSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCG 188
            S+++  G +  G LG G E ++  + T     S    VQ++  E     V   G++F  G
Sbjct: 4070 STIYGWGHNHRGQLG-GLEGSRIKTPTPCEALSLLRPVQLAGGEQSLFAVTPDGKLFATG 4128

Query: 189  DNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQV--TAGLNFTGFLTIRGHVHTCGSNTHG 246
              S    G   ++     P L+ +L+ V  K+V   +G      LT  G V+  G    G
Sbjct: 4129 YGSGGRLGVGGSDSWSI-PTLLGSLQHVFVKKVAVNSGGKHCLALTTDGEVYAWGEGEDG 4187

Query: 247  QLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ 306
            +LGHG+ L    PK +  L  + SV  IA G ++  A+T +G V ++G G    LGHG+ 
Sbjct: 4188 KLGHGNRLSYDRPKLLEHLNGM-SVADIACGSAHSAAITASGHVLTWGKGRYGRLGHGDS 4246

Query: 307  HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP 366
             D+L+P+ ++         +   +GD   + +     V++WG G  G LG G      LP
Sbjct: 4247 EDQLRPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKLP 4306

Query: 367  EPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDS 426
              + SL     ++V    + +  L  +G+VY +G   F  LG    G  D V RP+ + +
Sbjct: 4307 YKIESLAGLGVIKVECGSQFSVALTKSGAVYTWGKGDFHRLG---HGSVDHVRRPKKVAA 4363

Query: 427  LRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEP 473
            L+   +  I+TG  H V  +D G ++ +GDN+  QLG  T+     P
Sbjct: 4364 LQGKKIISIATGSLHCVACSDAGEVYTWGDNDEGQLGDGTVTAIQRP 4410



 Score =  121 bits (303), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 84/283 (29%), Positives = 137/283 (48%), Gaps = 9/283 (3%)

Query: 166  VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIF-RPRLVEALKGVPCKQVTAG 224
            V V++   H   +   G+V+  G+      GH   NR  + RP+L+E L G+    +  G
Sbjct: 4160 VAVNSGGKHCLALTTDGEVYAWGEGEDGKLGH--GNRLSYDRPKLLEHLNGMSVADIACG 4217

Query: 225  LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSV-VQIAAGPSYMLA 283
               +  +T  GHV T G   +G+LGHGD+ D+  PK +  L    ++ +   +G +  L 
Sbjct: 4218 SAHSAAITASGHVLTWGKGRYGRLGHGDSEDQLRPKLVEALLGYRAIDIACGSGDAQTLC 4277

Query: 284  VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 343
            +T +  V+S+G G    LG G       P  I++    G+ V++V  G +  VAL  SG 
Sbjct: 4278 ITDDDNVWSWGDGDYGKLGRGGSDGCKLPYKIESL--AGLGVIKVECGSQFSVALTKSGA 4335

Query: 344  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 403
            VYTWGKG    LGHG       P+ +++L+    + +           D G VY +G   
Sbjct: 4336 VYTWGKGDFHRLGHGSVDHVRRPKKVAALQGKKIISIATGSLHCVACSDAGEVYTWGDND 4395

Query: 404  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT 446
             G LG    G    + RPR++ +L+  H+ +++ G  HT+ ++
Sbjct: 4396 EGQLG---DGTVTAIQRPRLVAALQGKHIVKVTCGSAHTLALS 4435



 Score =  114 bits (286), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 88/293 (30%), Positives = 138/293 (47%), Gaps = 17/293 (5%)

Query: 178  VLQSGQVFTCGDNSSFCCGHRDT-NRPIFRPRLVEALKGVPCKQVT--AGLNFTGFLTIR 234
            V Q G+VF CG+ ++   G   T N P+  P  +  L     K+V   +G      LT+ 
Sbjct: 2960 VSQDGKVFACGEGTNGRLGLGVTHNVPL--PHQLPVLHQYVVKKVAVHSGGKHALALTLD 3017

Query: 235  GHVHTCGSNTHGQLGHGD--TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
            G V + G    G+LGHG+  TLD+P    +        +  IA G S+  A++  G +Y+
Sbjct: 3018 GKVFSWGEGEDGKLGHGNRTTLDKP---RLVEALRAKKIRDIACGSSHSAAISSQGELYT 3074

Query: 293  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEHVVALDSSGYVYTWGKG 350
            +G G    LGHG+   +L+P+ +      G  V++V+ G  D   +AL   G V++WG G
Sbjct: 3075 WGLGEYGRLGHGDNATQLKPKLVTAL--CGSRVIQVACGSRDAQTLALTEDGAVFSWGDG 3132

Query: 351  YCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFP 410
              G LG G       P  +  L     VQ+    + +  L   G V+ +G   +  LG  
Sbjct: 3133 DFGKLGRGGSEGSATPHEIERLSGIGVVQIECGAQFSLALTRAGEVWTWGKGDYYRLG-- 3190

Query: 411  DRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 463
              G    V +P+ +  LR   V  ++ G  H + VTD G+++ +GDN+  Q G
Sbjct: 3191 -HGGDQHVRKPQPIAGLRGRRVIHVAVGALHCLAVTDAGQVYAWGDNDHGQQG 3242



 Score = 96.3 bits (238), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 80/284 (28%), Positives = 128/284 (45%), Gaps = 14/284 (4%)

Query: 113  NMQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTR---INFPSAAHVVQV 168
             + + +G  H L L ++  V++ G    G LGHG      +S+ R   +   +   V  +
Sbjct: 4159 KVAVNSGGKHCLALTTDGEVYAWGEGEDGKLGHGNR----LSYDRPKLLEHLNGMSVADI 4214

Query: 169  SASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFT 228
            +    H+A +  SG V T G       GH D+   + RP+LVEAL G     +  G    
Sbjct: 4215 ACGSAHSAAITASGHVLTWGKGRYGRLGHGDSEDQL-RPKLVEALLGYRAIDIACGSGDA 4273

Query: 229  GFLTIRG--HVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTG 286
              L I    +V + G   +G+LG G +     P  I  L  +G V+++  G  + +A+T 
Sbjct: 4274 QTLCITDDDNVWSWGDGDYGKLGRGGSDGCKLPYKIESLAGLG-VIKVECGSQFSVALTK 4332

Query: 287  NGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYT 346
            +G VY++G G    LGHG      +P+ +     +G  ++ ++ G  H VA   +G VYT
Sbjct: 4333 SGAVYTWGKGDFHRLGHGSVDHVRRPKKVAAL--QGKKIISIATGSLHCVACSDAGEVYT 4390

Query: 347  WGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVL 390
            WG    G LG G       P  +++L+    V+V      T  L
Sbjct: 4391 WGDNDEGQLGDGTVTAIQRPRLVAALQGKHIVKVTCGSAHTLAL 4434



 Score = 93.2 bits (230), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 66/238 (27%), Positives = 111/238 (46%), Gaps = 7/238 (2%)

Query: 236 HVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 295
           + ++ G+  + +LGHGD   R  P  I  L  V  V  +  G SY  A+T  G +Y++G 
Sbjct: 661 NAYSWGTGDNRRLGHGDCHSRELPTKIESL--VRRVKSVYCGCSYSAAITLRGNLYTWGR 718

Query: 296 GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGAL 355
           G+   LGHG   D+  P  +   +   +  V + +GD H + L + G VY WG G  G L
Sbjct: 719 GNYGRLGHGISDDQCLPTMVMALKDHQVVDVALGSGDAHTLCLTNEGLVYAWGDGDYGKL 778

Query: 356 GHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVS 415
           G+        P  +  L      +V A  + +  L   G +Y +G          +R V 
Sbjct: 779 GNASCNSSLQPLLIECLPR--VQRVFAGSQFSLALTGEGQLYSWGKASCLGHQLVERNVQ 836

Query: 416 DKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEP 473
              + PR++ SL+   +  ++ G+ H + ++  G +FG+G N+  Q+   ++  C EP
Sbjct: 837 GCSV-PRLITSLQHKRIVDVAVGVTHCLALSSAGEIFGWGRNDNQQICPASV--CSEP 891



 Score = 91.7 bits (226), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 78/272 (28%), Positives = 130/272 (47%), Gaps = 24/272 (8%)

Query: 188 GDNSSFCCGHRDTNR---PIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNT 244
           GDN     GH D +    P     LV  +K V C     G +++  +T+RG+++T G   
Sbjct: 668 GDNRRL--GHGDCHSRELPTKIESLVRRVKSVYC-----GCSYSAAITLRGNLYTWGRGN 720

Query: 245 HGQLGHGDTLDRPTPKSIAPLEEVGSV-VQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH 303
           +G+LGHG + D+  P  +  L++   V V + +G ++ L +T  G+VY++G G    LG+
Sbjct: 721 YGRLGHGISDDQCLPTMVMALKDHQVVDVALGSGDAHTLCLTNEGLVYAWGDGDYGKLGN 780

Query: 304 GEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK 363
              +  LQP  I+   R    V RV AG +  +AL   G +Y+WGK  C  LGH   +++
Sbjct: 781 ASCNSSLQPLLIECLPR----VQRVFAGSQFSLALTGEGQLYSWGKASC--LGH-QLVER 833

Query: 364 -----TLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKV 418
                ++P  ++SL+    V V         L   G ++G+G      +  P    S+ +
Sbjct: 834 NVQGCSVPRLITSLQHKRIVDVAVGVTHCLALSSAGEIFGWGRNDNQQI-CPASVCSEPL 892

Query: 419 LRPRILDSLRAHHVSQISTGLYHTVVVTDRGR 450
           LR  IL +L     S ++     +++ T   R
Sbjct: 893 LRQPILVTLPTLPASGMACTAVQSLIWTQSSR 924



 Score = 91.3 bits (225), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 68/245 (27%), Positives = 114/245 (46%), Gaps = 12/245 (4%)

Query: 237  VHTCGSNTHGQLG--HGDTLDRPT-PKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
            V   G N   QLG   G  +  PT  ++I+ L  +     IA G   +  V+ +G V++ 
Sbjct: 2914 VMVWGLNDKEQLGGLKGSKVKVPTFSQTISRLRPI----HIAGGSKSLFVVSQDGKVFAC 2969

Query: 294  GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 353
            G G+N  LG G  H+   P  +    +  +  V V +G +H +AL   G V++WG+G  G
Sbjct: 2970 GEGTNGRLGLGVTHNVPLPHQLPVLHQYVVKKVAVHSGGKHALALTLDGKVFSWGEGEDG 3029

Query: 354  ALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRG 413
             LGHG+      P  + +L++     +      +  +   G +Y +G   +G LG  D  
Sbjct: 3030 KLGHGNRTTLDKPRLVEALRAKKIRDIACGSSHSAAISSQGELYTWGLGEYGRLGHGDNA 3089

Query: 414  VSDKVLRPRILDSLRAHHVSQISTGLY--HTVVVTDRGRLFGFGDNERAQLGHDTLRGCL 471
                 L+P+++ +L    V Q++ G     T+ +T+ G +F +GD +  +LG     G  
Sbjct: 3090 TQ---LKPKLVTALCGSRVIQVACGSRDAQTLALTEDGAVFSWGDGDFGKLGRGGSEGSA 3146

Query: 472  EPTEI 476
             P EI
Sbjct: 3147 TPHEI 3151



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 76/258 (29%), Positives = 125/258 (48%), Gaps = 16/258 (6%)

Query: 224  GLNFTGFLTIRGHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSY 280
             L++ G  TI G  H    N  GQLG   G  +  PTP ++++ L  V    Q+A G   
Sbjct: 4063 ALSWGGASTIYGWGH----NHRGQLGGLEGSRIKTPTPCEALSLLRPV----QLAGGEQS 4114

Query: 281  MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 340
            + AVT +G +++ G GS   LG G       P  + + +   +  V V++G +H +AL +
Sbjct: 4115 LFAVTPDGKLFATGYGSGGRLGVGGSDSWSIPTLLGSLQHVFVKKVAVNSGGKHCLALTT 4174

Query: 341  SGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 400
             G VY WG+G  G LGHG+ +    P+ L  L       +      +  +  +G V  +G
Sbjct: 4175 DGEVYAWGEGEDGKLGHGNRLSYDRPKLLEHLNGMSVADIACGSAHSAAITASGHVLTWG 4234

Query: 401  WMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDNE 458
               +G LG  D   S+  LRP+++++L  +    I+  +G   T+ +TD   ++ +GD +
Sbjct: 4235 KGRYGRLGHGD---SEDQLRPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGD 4291

Query: 459  RAQLGHDTLRGCLEPTEI 476
              +LG     GC  P +I
Sbjct: 4292 YGKLGRGGSDGCKLPYKI 4309



 Score = 68.2 bits (165), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 53/209 (25%), Positives = 96/209 (45%), Gaps = 16/209 (7%)

Query: 271 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHD-ELQPRAIQTFRRKGIHVVRVS 329
           V Q+A     +L ++  G +Y++         H  + D E QP        +    +   
Sbjct: 597 VKQVACSKDIVLLLSKEGKLYNW---------HISKPDTEPQPLDFGDIGSETFISIASH 647

Query: 330 AGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFV 389
               H +A+D++   Y+WG G    LGHGD   + LP  + SL   +    C       +
Sbjct: 648 CEGRHFLAVDNNFNAYSWGTGDNRRLGHGDCHSRELPTKIESLVRRVKSVYCGCSYSAAI 707

Query: 390 LVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTD 447
            +  G++Y +G   +G LG    G+SD    P ++ +L+ H V  ++  +G  HT+ +T+
Sbjct: 708 TL-RGNLYTWGRGNYGRLG---HGISDDQCLPTMVMALKDHQVVDVALGSGDAHTLCLTN 763

Query: 448 RGRLFGFGDNERAQLGHDTLRGCLEPTEI 476
            G ++ +GD +  +LG+ +    L+P  I
Sbjct: 764 EGLVYAWGDGDYGKLGNASCNSSLQPLLI 792



 Score = 45.1 bits (105), Expect = 0.089,   Method: Compositional matrix adjust.
 Identities = 46/184 (25%), Positives = 82/184 (44%), Gaps = 13/184 (7%)

Query: 121 YHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHV-VQVSASENHAAFVL 179
           Y   +    ++++ G    G LGHG    QC+    +       V V + + + H   + 
Sbjct: 703 YSAAITLRGNLYTWGRGNYGRLGHGISDDQCLPTMVMALKDHQVVDVALGSGDAHTLCLT 762

Query: 180 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 239
             G V+  GD      G+   N  + +P L+E L  V  ++V AG  F+  LT  G +++
Sbjct: 763 NEGLVYAWGDGDYGKLGNASCNSSL-QPLLIECLPRV--QRVFAGSQFSLALTGEGQLYS 819

Query: 240 CGSNTHGQLGHGDTLDR-----PTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 294
            G  +   LGH   ++R       P+ I  L+    +V +A G ++ LA++  G ++ +G
Sbjct: 820 WGKASC--LGH-QLVERNVQGCSVPRLITSLQH-KRIVDVAVGVTHCLALSSAGEIFGWG 875

Query: 295 SGSN 298
              N
Sbjct: 876 RNDN 879



 Score = 43.9 bits (102), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 35/135 (25%), Positives = 63/135 (46%), Gaps = 5/135 (3%)

Query: 332  DEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 391
            D+  ++   +  +Y WG  + G LG  +      P P  +L     VQ+   ++  F + 
Sbjct: 4060 DDWALSWGGASTIYGWGHNHRGQLGGLEGSRIKTPTPCEALSLLRPVQLAGGEQSLFAVT 4119

Query: 392  DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRG 449
              G ++     G+GS G    G SD    P +L SL+   V +++  +G  H + +T  G
Sbjct: 4120 PDGKLFA---TGYGSGGRLGVGGSDSWSIPTLLGSLQHVFVKKVAVNSGGKHCLALTTDG 4176

Query: 450  RLFGFGDNERAQLGH 464
             ++ +G+ E  +LGH
Sbjct: 4177 EVYAWGEGEDGKLGH 4191


>gi|195432783|ref|XP_002064396.1| GK20144 [Drosophila willistoni]
 gi|194160481|gb|EDW75382.1| GK20144 [Drosophila willistoni]
          Length = 4996

 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 100/338 (29%), Positives = 158/338 (46%), Gaps = 17/338 (5%)

Query: 114  MQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTR---INFPSAAHVVQVS 169
            + I+ G     ++S +  VF+CG    G LG G   T  V       +        V V 
Sbjct: 3063 IHISGGSKSLFIVSQDGKVFACGEGTNGRLGLG--VTHNVPLPHQLPVLHQYVVKKVAVH 3120

Query: 170  ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIF-RPRLVEALKGVPCKQVTAGLNFT 228
            +   HA  +   G+VF+ G+      GH   NR    +PRLVEAL+    + V  G + +
Sbjct: 3121 SGGKHALALTLDGKVFSWGEGEDGKLGH--GNRTTLDKPRLVEALRAKKIRDVACGSSHS 3178

Query: 229  GFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGP--SYMLAVTG 286
              ++ +G ++T G   +G+LGHGD   +  PK +  L     V+Q+A G   +  LA+T 
Sbjct: 3179 AAISSQGELYTWGLGEYGRLGHGDNATQLKPKQVTALAG-RRVIQVACGSRDAQTLALTE 3237

Query: 287  NGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYT 346
            +G V+S+G G    LG G       P  I+  R  GI V+++  G +  +AL  +G V+T
Sbjct: 3238 DGAVFSWGDGDFGKLGRGGSEGSATPHEIE--RLSGIGVIQIECGAQFSLALTRAGEVWT 3295

Query: 347  WGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGS 406
            WGKG    LGHG +     P+P+  L+    + V         + D G VY +G    G 
Sbjct: 3296 WGKGDYYRLGHGGDQHVRKPQPIGGLRGRRVIHVAVGALHCLAVTDAGQVYAWGDNDHGQ 3355

Query: 407  LGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV 444
             G  +  V+ K   P ++  L A  V++++ G  H++ 
Sbjct: 3356 QGSGNTFVNKK---PALVIGLDAVFVNRVACGSSHSIA 3390



 Score =  122 bits (307), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 100/347 (28%), Positives = 162/347 (46%), Gaps = 8/347 (2%)

Query: 129  SSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCG 188
            S+++  G +  G LG G E ++  + T     S    VQ++  E     V   G++F  G
Sbjct: 4146 STIYGWGHNHRGQLG-GLEGSRIKTPTPCEALSLLRPVQLAGGEQSLFAVTPDGKLFATG 4204

Query: 189  DNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQV--TAGLNFTGFLTIRGHVHTCGSNTHG 246
              S    G   ++     P L+ +L+ V  K+V   +G      LT  G V+  G    G
Sbjct: 4205 YGSGGRLGVGGSDSWAI-PTLLGSLQHVFVKKVAVNSGGKHCLALTTEGEVYAWGEGEDG 4263

Query: 247  QLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ 306
            +LGHG+ +    PK +  L  + SV  IA G ++  A+T +G V ++G G    LGHG+ 
Sbjct: 4264 KLGHGNRMSYDRPKLVEHLNGM-SVADIACGSAHSAAITSSGHVLTWGKGRYGRLGHGDS 4322

Query: 307  HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP 366
             D+L+P+ ++         +   +GD   + +     V++WG G  G LG G      LP
Sbjct: 4323 EDQLRPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKLP 4382

Query: 367  EPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDS 426
              + SL     ++V    + +  L  +G+VY +G   F  LG    G  D V RP+ + +
Sbjct: 4383 YKIESLAGLGVIKVECGSQFSVALTKSGAVYTWGKGDFHRLG---HGSVDHVRRPKKVAA 4439

Query: 427  LRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEP 473
            L+   +  I+TG  H V  +D G ++ +GDN+  QLG  T+     P
Sbjct: 4440 LQGKKIISIATGSLHCVACSDAGEVYTWGDNDEGQLGDGTVTAIQRP 4486



 Score =  121 bits (303), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 85/283 (30%), Positives = 137/283 (48%), Gaps = 9/283 (3%)

Query: 166  VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIF-RPRLVEALKGVPCKQVTAG 224
            V V++   H   +   G+V+  G+      GH   NR  + RP+LVE L G+    +  G
Sbjct: 4236 VAVNSGGKHCLALTTEGEVYAWGEGEDGKLGH--GNRMSYDRPKLVEHLNGMSVADIACG 4293

Query: 225  LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSV-VQIAAGPSYMLA 283
               +  +T  GHV T G   +G+LGHGD+ D+  PK +  L    ++ +   +G +  L 
Sbjct: 4294 SAHSAAITSSGHVLTWGKGRYGRLGHGDSEDQLRPKLVEALLGYRAIDIACGSGDAQTLC 4353

Query: 284  VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 343
            +T +  V+S+G G    LG G       P  I++    G+ V++V  G +  VAL  SG 
Sbjct: 4354 ITDDDNVWSWGDGDYGKLGRGGSDGCKLPYKIESL--AGLGVIKVECGSQFSVALTKSGA 4411

Query: 344  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 403
            VYTWGKG    LGHG       P+ +++L+    + +           D G VY +G   
Sbjct: 4412 VYTWGKGDFHRLGHGSVDHVRRPKKVAALQGKKIISIATGSLHCVACSDAGEVYTWGDND 4471

Query: 404  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT 446
             G LG    G    + RPR++ +L+  H+ +++ G  HT+ ++
Sbjct: 4472 EGQLG---DGTVTAIQRPRLVAALQGKHIVKVTCGSAHTLALS 4511



 Score =  115 bits (287), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 87/305 (28%), Positives = 141/305 (46%), Gaps = 17/305 (5%)

Query: 166  VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDT-NRPIFRPRLVEALKGVPCKQVT-- 222
            + +S        V Q G+VF CG+ ++   G   T N P+  P  +  L     K+V   
Sbjct: 3063 IHISGGSKSLFIVSQDGKVFACGEGTNGRLGLGVTHNVPL--PHQLPVLHQYVVKKVAVH 3120

Query: 223  AGLNFTGFLTIRGHVHTCGSNTHGQLGHGD--TLDRPTPKSIAPLEEVGSVVQIAAGPSY 280
            +G      LT+ G V + G    G+LGHG+  TLD+P    +        +  +A G S+
Sbjct: 3121 SGGKHALALTLDGKVFSWGEGEDGKLGHGNRTTLDKP---RLVEALRAKKIRDVACGSSH 3177

Query: 281  MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEHVVAL 338
              A++  G +Y++G G    LGHG+   +L+P+ +      G  V++V+ G  D   +AL
Sbjct: 3178 SAAISSQGELYTWGLGEYGRLGHGDNATQLKPKQVTAL--AGRRVIQVACGSRDAQTLAL 3235

Query: 339  DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYG 398
               G V++WG G  G LG G       P  +  L     +Q+    + +  L   G V+ 
Sbjct: 3236 TEDGAVFSWGDGDFGKLGRGGSEGSATPHEIERLSGIGVIQIECGAQFSLALTRAGEVWT 3295

Query: 399  FGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNE 458
            +G   +  LG    G    V +P+ +  LR   V  ++ G  H + VTD G+++ +GDN+
Sbjct: 3296 WGKGDYYRLG---HGGDQHVRKPQPIGGLRGRRVIHVAVGALHCLAVTDAGQVYAWGDND 3352

Query: 459  RAQLG 463
              Q G
Sbjct: 3353 HGQQG 3357



 Score =  105 bits (261), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 82/307 (26%), Positives = 139/307 (45%), Gaps = 30/307 (9%)

Query: 164 HVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTA 223
            V Q++ SE+    + Q G+++ C              +P   P+ +E L       +  
Sbjct: 572 QVKQIACSESLLLLLSQDGKLYNC-----------RLGKPELEPQPIEELAQETILSIAG 620

Query: 224 GLNFTGFLTIRGH--VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 281
                 FL I  +   ++ G+    +LGHGDT  R  P  I+ L+    V  +  G SY 
Sbjct: 621 HCEGRHFLAIDSNRNAYSWGAGEDHRLGHGDTHARAVPTKISALDRC--VKAVFCGCSYS 678

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 341
            A+T +G +Y++G G+   LGHG   D+  P  +       I  V + +GD H + L S 
Sbjct: 679 AAITWSGNLYTWGRGTYGRLGHGNSDDQCVPAIVMALAEYEIIDVALGSGDAHSLCLTSE 738

Query: 342 GYVYTWGKGYCGALGHGD---EIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYG 398
           G VY WG G  G LG+G+    +   L E L  ++     ++ A  + +  L   G +Y 
Sbjct: 739 GLVYAWGDGDYGKLGNGNCNSSLQPILVETLPRVQ-----RIFAGAQSSMALTTEGHLYS 793

Query: 399 FG---WMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFG 455
           +G    +G   +    +G S     PR++ SL+   +  ++ G+ H + +T  G +FG+G
Sbjct: 794 WGKASCLGHQQVERSVQGCS----VPRLVSSLQHKRLVDVAVGVAHCLALTSCGEVFGWG 849

Query: 456 DNERAQL 462
            N+  Q+
Sbjct: 850 RNDSQQI 856



 Score = 95.5 bits (236), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 80/284 (28%), Positives = 127/284 (44%), Gaps = 14/284 (4%)

Query: 113  NMQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTR---INFPSAAHVVQV 168
             + + +G  H L L +   V++ G    G LGHG      +S+ R   +   +   V  +
Sbjct: 4235 KVAVNSGGKHCLALTTEGEVYAWGEGEDGKLGHGNR----MSYDRPKLVEHLNGMSVADI 4290

Query: 169  SASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFT 228
            +    H+A +  SG V T G       GH D+   + RP+LVEAL G     +  G    
Sbjct: 4291 ACGSAHSAAITSSGHVLTWGKGRYGRLGHGDSEDQL-RPKLVEALLGYRAIDIACGSGDA 4349

Query: 229  GFLTIRG--HVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTG 286
              L I    +V + G   +G+LG G +     P  I  L  +G V+++  G  + +A+T 
Sbjct: 4350 QTLCITDDDNVWSWGDGDYGKLGRGGSDGCKLPYKIESLAGLG-VIKVECGSQFSVALTK 4408

Query: 287  NGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYT 346
            +G VY++G G    LGHG      +P+ +     +G  ++ ++ G  H VA   +G VYT
Sbjct: 4409 SGAVYTWGKGDFHRLGHGSVDHVRRPKKVAAL--QGKKIISIATGSLHCVACSDAGEVYT 4466

Query: 347  WGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVL 390
            WG    G LG G       P  +++L+    V+V      T  L
Sbjct: 4467 WGDNDEGQLGDGTVTAIQRPRLVAALQGKHIVKVTCGSAHTLAL 4510



 Score = 89.0 bits (219), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 75/258 (29%), Positives = 125/258 (48%), Gaps = 16/258 (6%)

Query: 224  GLNFTGFLTIRGHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSY 280
             L++ G  TI G  H    N  GQLG   G  +  PTP ++++ L  V    Q+A G   
Sbjct: 4139 ALSWGGASTIYGWGH----NHRGQLGGLEGSRIKTPTPCEALSLLRPV----QLAGGEQS 4190

Query: 281  MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 340
            + AVT +G +++ G GS   LG G       P  + + +   +  V V++G +H +AL +
Sbjct: 4191 LFAVTPDGKLFATGYGSGGRLGVGGSDSWAIPTLLGSLQHVFVKKVAVNSGGKHCLALTT 4250

Query: 341  SGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 400
             G VY WG+G  G LGHG+ +    P+ +  L       +      +  +  +G V  +G
Sbjct: 4251 EGEVYAWGEGEDGKLGHGNRMSYDRPKLVEHLNGMSVADIACGSAHSAAITSSGHVLTWG 4310

Query: 401  WMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDNE 458
               +G LG  D   S+  LRP+++++L  +    I+  +G   T+ +TD   ++ +GD +
Sbjct: 4311 KGRYGRLGHGD---SEDQLRPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGD 4367

Query: 459  RAQLGHDTLRGCLEPTEI 476
              +LG     GC  P +I
Sbjct: 4368 YGKLGRGGSDGCKLPYKI 4385



 Score = 89.0 bits (219), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 68/245 (27%), Positives = 113/245 (46%), Gaps = 12/245 (4%)

Query: 237  VHTCGSNTHGQLG--HGDTLDRPT-PKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
            V   G N   QLG   G  +  PT  ++I+ L  +     I+ G   +  V+ +G V++ 
Sbjct: 3029 VMVWGLNDKEQLGGLKGSKVKVPTFSQTISRLRPI----HISGGSKSLFIVSQDGKVFAC 3084

Query: 294  GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 353
            G G+N  LG G  H+   P  +    +  +  V V +G +H +AL   G V++WG+G  G
Sbjct: 3085 GEGTNGRLGLGVTHNVPLPHQLPVLHQYVVKKVAVHSGGKHALALTLDGKVFSWGEGEDG 3144

Query: 354  ALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRG 413
             LGHG+      P  + +L++     V      +  +   G +Y +G   +G LG  D  
Sbjct: 3145 KLGHGNRTTLDKPRLVEALRAKKIRDVACGSSHSAAISSQGELYTWGLGEYGRLGHGDNA 3204

Query: 414  VSDKVLRPRILDSLRAHHVSQISTGLY--HTVVVTDRGRLFGFGDNERAQLGHDTLRGCL 471
                 L+P+ + +L    V Q++ G     T+ +T+ G +F +GD +  +LG     G  
Sbjct: 3205 TQ---LKPKQVTALAGRRVIQVACGSRDAQTLALTEDGAVFSWGDGDFGKLGRGGSEGSA 3261

Query: 472  EPTEI 476
             P EI
Sbjct: 3262 TPHEI 3266



 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 44/167 (26%), Positives = 83/167 (49%), Gaps = 6/167 (3%)

Query: 309 ELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEP 368
           EL+P+ I+   ++ I  +       H +A+DS+   Y+WG G    LGHGD   + +P  
Sbjct: 601 ELEPQPIEELAQETILSIAGHCEGRHFLAIDSNRNAYSWGAGEDHRLGHGDTHARAVPTK 660

Query: 369 LSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLR 428
           +S+L   +    C     +  +  +G++Y +G   +G LG    G SD    P I+ +L 
Sbjct: 661 ISALDRCVKAVFCGCS-YSAAITWSGNLYTWGRGTYGRLG---HGNSDDQCVPAIVMALA 716

Query: 429 AHHVSQIS--TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEP 473
            + +  ++  +G  H++ +T  G ++ +GD +  +LG+      L+P
Sbjct: 717 EYEIIDVALGSGDAHSLCLTSEGLVYAWGDGDYGKLGNGNCNSSLQP 763



 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 69/237 (29%), Positives = 112/237 (47%), Gaps = 16/237 (6%)

Query: 119 GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
           GR+   + SN + +S G+     LGHG    + V  T+I+      V  V    +++A +
Sbjct: 624 GRHFLAIDSNRNAYSWGAGEDHRLGHGDTHARAVP-TKISALDRC-VKAVFCGCSYSAAI 681

Query: 179 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT--AGLNFTGFLTIRGH 236
             SG ++T G  +    GH +++     P +V AL       V   +G   +  LT  G 
Sbjct: 682 TWSGNLYTWGRGTYGRLGHGNSDDQCV-PAIVMALAEYEIIDVALGSGDAHSLCLTSEGL 740

Query: 237 VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 296
           V+  G   +G+LG+G+      P  +   E +  V +I AG    +A+T  G +YS+G  
Sbjct: 741 VYAWGDGDYGKLGNGNCNSSLQPILV---ETLPRVQRIFAGAQSSMALTTEGHLYSWGKA 797

Query: 297 SNFCLGHGEQHDELQ----PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 349
           S  CLGH +    +Q    PR + + + K   +V V+ G  H +AL S G V+ WG+
Sbjct: 798 S--CLGHQQVERSVQGCSVPRLVSSLQHK--RLVDVAVGVAHCLALTSCGEVFGWGR 850



 Score = 45.1 bits (105), Expect = 0.093,   Method: Compositional matrix adjust.
 Identities = 35/135 (25%), Positives = 63/135 (46%), Gaps = 5/135 (3%)

Query: 332  DEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 391
            D+  ++   +  +Y WG  + G LG  +      P P  +L     VQ+   ++  F + 
Sbjct: 4136 DDWALSWGGASTIYGWGHNHRGQLGGLEGSRIKTPTPCEALSLLRPVQLAGGEQSLFAVT 4195

Query: 392  DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRG 449
              G ++     G+GS G    G SD    P +L SL+   V +++  +G  H + +T  G
Sbjct: 4196 PDGKLFA---TGYGSGGRLGVGGSDSWAIPTLLGSLQHVFVKKVAVNSGGKHCLALTTEG 4252

Query: 450  RLFGFGDNERAQLGH 464
             ++ +G+ E  +LGH
Sbjct: 4253 EVYAWGEGEDGKLGH 4267


>gi|242055697|ref|XP_002456994.1| hypothetical protein SORBIDRAFT_03g046900 [Sorghum bicolor]
 gi|241928969|gb|EES02114.1| hypothetical protein SORBIDRAFT_03g046900 [Sorghum bicolor]
          Length = 870

 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 98/323 (30%), Positives = 150/323 (46%), Gaps = 20/323 (6%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V  V     HAA V ++G+VFT G+ S    GH      +  PRLVE+L       V  G
Sbjct: 79  VYHVDCGVKHAALVTKNGEVFTWGEESGGRLGHGSREDSVH-PRLVESLAICNVDIVACG 137

Query: 225 LNFTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 282
              T  +T  G ++T G  TH  G LG+G  +    PK I+   E   V  ++ G  +  
Sbjct: 138 EFHTCAVTTAGELYTWGDGTHNIGLLGNGTDVSHWIPKRISGALEGHQVAYVSCGTWHTA 197

Query: 283 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL---- 338
            VT  G +++FG G+   LGHG +     PR +++    G+  + V+ G  H  A+    
Sbjct: 198 LVTSRGQLFTFGDGTFGVLGHGNRESFSCPREVESL--SGLKTIAVACGVWHTAAVVEVI 255

Query: 339 -------DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 391
                   SSG ++TWG G    LGHGD+  +  P  ++SL  +   ++      T  L 
Sbjct: 256 VTQSSSSMSSGKLFTWGDGDKHRLGHGDKEPRLKPTCVASLIDYDFCRIACGHSLTVGLT 315

Query: 392 DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRL 451
            +G +   G   +G LG P    SD  L P +++ +   HV Q++ G YH  V+T++  +
Sbjct: 316 TSGQILSMGNTVYGQLGNPR---SDGKL-PCLVEDIMGEHVVQVACGSYHVAVLTNKSEV 371

Query: 452 FGFGDNERAQLGHDTLRGCLEPT 474
           F +G     +LGH  +     PT
Sbjct: 372 FTWGKGANGRLGHGDIEDRKIPT 394



 Score = 95.5 bits (236), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 85/274 (31%), Positives = 127/274 (46%), Gaps = 23/274 (8%)

Query: 116 ITTGRYHTLLISNSS---VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAH-VVQVSAS 171
           +  G +HT  ++ +     +  G+   G+LG+G + +  +   RI+     H V  VS  
Sbjct: 134 VACGEFHTCAVTTAGELYTWGDGTHNIGLLGNGTDVSHWIP-KRISGALEGHQVAYVSCG 192

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFR-PRLVEALKGVPCKQVTAGLNFTGF 230
             H A V   GQ+FT GD +    GH   NR  F  PR VE+L G+    V  G+  T  
Sbjct: 193 TWHTALVTSRGQLFTFGDGTFGVLGH--GNRESFSCPREVESLSGLKTIAVACGVWHTAA 250

Query: 231 LT-----------IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPS 279
           +              G + T G     +LGHGD   R  P  +A L +     +IA G S
Sbjct: 251 VVEVIVTQSSSSMSSGKLFTWGDGDKHRLGHGDKEPRLKPTCVASLIDY-DFCRIACGHS 309

Query: 280 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 339
             + +T +G + S G+     LG+     +L P  ++     G HVV+V+ G  HV  L 
Sbjct: 310 LTVGLTTSGQILSMGNTVYGQLGNPRSDGKL-PCLVEDI--MGEHVVQVACGSYHVAVLT 366

Query: 340 SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
           +   V+TWGKG  G LGHGD  D+ +P  + +L+
Sbjct: 367 NKSEVFTWGKGANGRLGHGDIEDRKIPTLVEALR 400



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 72/243 (29%), Positives = 119/243 (48%), Gaps = 25/243 (10%)

Query: 252 DTLDRPTPKS----IAPLEE--VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGE 305
           DT+ R T K+      PLE   V  V  +  G  +   VT NG V+++G  S   LGHG 
Sbjct: 54  DTVIRSTGKADFLLPKPLESKLVLDVYHVDCGVKHAALVTKNGEVFTWGEESGGRLGHGS 113

Query: 306 QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY--CGALGHGDEIDK 363
           + D + PR +++     + +  V+ G+ H  A+ ++G +YTWG G    G LG+G ++  
Sbjct: 114 REDSVHPRLVESLAICNVDI--VACGEFHTCAVTTAGELYTWGDGTHNIGLLGNGTDVSH 171

Query: 364 TLPEPLS-SLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPR 422
            +P+ +S +L+ H    V      T ++   G ++ FG   FG LG  +R   +    PR
Sbjct: 172 WIPKRISGALEGHQVAYVSCGTWHTALVTSRGQLFTFGDGTFGVLGHGNR---ESFSCPR 228

Query: 423 ILDSLRAHHVSQISTGLYHTVVVTD-----------RGRLFGFGDNERAQLGHDTLRGCL 471
            ++SL       ++ G++HT  V +            G+LF +GD ++ +LGH      L
Sbjct: 229 EVESLSGLKTIAVACGVWHTAAVVEVIVTQSSSSMSSGKLFTWGDGDKHRLGHGDKEPRL 288

Query: 472 EPT 474
           +PT
Sbjct: 289 KPT 291



 Score = 85.1 bits (209), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 87/347 (25%), Positives = 146/347 (42%), Gaps = 37/347 (10%)

Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHVVQVSASE 172
           ++  L+  N  VF+ G    G LGHG       P   + ++   ++         V+  E
Sbjct: 87  KHAALVTKNGEVFTWGEESGGRLGHGSREDSVHPRLVESLAICNVDI--------VACGE 138

Query: 173 NHAAFVLQSGQVFTCGD---NSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
            H   V  +G+++T GD   N        D +  I + R+  AL+G     V+ G   T 
Sbjct: 139 FHTCAVTTAGELYTWGDGTHNIGLLGNGTDVSHWIPK-RISGALEGHQVAYVSCGTWHTA 197

Query: 230 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT---- 285
            +T RG + T G  T G LGHG+      P+ +  L  + ++  +A G  +  AV     
Sbjct: 198 LVTSRGQLFTFGDGTFGVLGHGNRESFSCPREVESLSGLKTIA-VACGVWHTAAVVEVIV 256

Query: 286 -------GNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
                   +G ++++G G    LGHG++   L+P  + +         R++ G    V L
Sbjct: 257 TQSSSSMSSGKLFTWGDGDKHRLGHGDKEPRLKPTCVASL--IDYDFCRIACGHSLTVGL 314

Query: 339 DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYG 398
            +SG + + G    G LG+    D  LP  +  +     VQV        VL +   V+ 
Sbjct: 315 TTSGQILSMGNTVYGQLGN-PRSDGKLPCLVEDIMGEHVVQVACGSYHVAVLTNKSEVFT 373

Query: 399 FGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVV 445
           +G    G LG  D  + D+ + P ++++LR   V  I+ G   T  +
Sbjct: 374 WGKGANGRLGHGD--IEDRKI-PTLVEALRDRGVRHIACGSNFTSAI 417



 Score = 77.4 bits (189), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 75/278 (26%), Positives = 123/278 (44%), Gaps = 18/278 (6%)

Query: 207 PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 266
           P+ +E+   +    V  G+     +T  G V T G  + G+LGHG   D   P+ +  L 
Sbjct: 68  PKPLESKLVLDVYHVDCGVKHAALVTKNGEVFTWGEESGGRLGHGSREDSVHPRLVESL- 126

Query: 267 EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC--LGHGEQHDELQPRAIQTFRRKGIH 324
            + +V  +A G  +  AVT  G +Y++G G++    LG+G       P+ I +   +G  
Sbjct: 127 AICNVDIVACGEFHTCAVTTAGELYTWGDGTHNIGLLGNGTDVSHWIPKRI-SGALEGHQ 185

Query: 325 VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARK 384
           V  VS G  H   + S G ++T+G G  G LGHG+    + P  + SL     + V    
Sbjct: 186 VAYVSCGTWHTALVTSRGQLFTFGDGTFGVLGHGNRESFSCPREVESLSGLKTIAVACGV 245

Query: 385 RKTFVLVDT-----------GSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVS 433
             T  +V+            G ++ +G      LG  D+   +  L+P  + SL  +   
Sbjct: 246 WHTAAVVEVIVTQSSSSMSSGKLFTWGDGDKHRLGHGDK---EPRLKPTCVASLIDYDFC 302

Query: 434 QISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCL 471
           +I+ G   TV +T  G++   G+    QLG+    G L
Sbjct: 303 RIACGHSLTVGLTTSGQILSMGNTVYGQLGNPRSDGKL 340



 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 64/223 (28%), Positives = 104/223 (46%), Gaps = 22/223 (9%)

Query: 116 ITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGP-ETTQCVSFTRINFPSAAHVVQVSASEN 173
           ++ G +HT L+ S   +F+ G    GVLGHG  E+  C     +   S    + V+    
Sbjct: 189 VSCGTWHTALVTSRGQLFTFGDGTFGVLGHGNRESFSCPR--EVESLSGLKTIAVACGVW 246

Query: 174 HAAFVLQ-----------SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 222
           H A V++           SG++FT GD      GH D   P  +P  V +L      ++ 
Sbjct: 247 HTAAVVEVIVTQSSSSMSSGKLFTWGDGDKHRLGHGD-KEPRLKPTCVASLIDYDFCRIA 305

Query: 223 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEV--GSVVQIAAGPSY 280
            G + T  LT  G + + G+  +GQLG+     R   K    +E++    VVQ+A G  +
Sbjct: 306 CGHSLTVGLTTSGQILSMGNTVYGQLGN----PRSDGKLPCLVEDIMGEHVVQVACGSYH 361

Query: 281 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGI 323
           +  +T    V+++G G+N  LGHG+  D   P  ++  R +G+
Sbjct: 362 VAVLTNKSEVFTWGKGANGRLGHGDIEDRKIPTLVEALRDRGV 404



 Score = 70.1 bits (170), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 53/170 (31%), Positives = 78/170 (45%), Gaps = 4/170 (2%)

Query: 308 DELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPE 367
           D L P+ +++  +  + V  V  G +H   +  +G V+TWG+   G LGHG   D   P 
Sbjct: 64  DFLLPKPLES--KLVLDVYHVDCGVKHAALVTKNGEVFTWGEESGGRLGHGSREDSVHPR 121

Query: 368 PLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRP-RILDS 426
            + SL       V   +  T  +   G +Y +G  G  ++G    G       P RI  +
Sbjct: 122 LVESLAICNVDIVACGEFHTCAVTTAGELYTWG-DGTHNIGLLGNGTDVSHWIPKRISGA 180

Query: 427 LRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 476
           L  H V+ +S G +HT +VT RG+LF FGD     LGH        P E+
Sbjct: 181 LEGHQVAYVSCGTWHTALVTSRGQLFTFGDGTFGVLGHGNRESFSCPREV 230



 Score = 52.0 bits (123), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 44/141 (31%), Positives = 65/141 (46%), Gaps = 24/141 (17%)

Query: 329 SAGDEHVVALDSSGYVYTWGKGYCG---------ALGHGDEIDKTLPEPLSSLKSHLAVQ 379
           SA D++    DSSG VY WG+  C           +    + D  LP+P   L+S L + 
Sbjct: 26  SAQDDY----DSSGDVYVWGEVICDNTVRVGPDTVIRSTGKADFLLPKP---LESKLVLD 78

Query: 380 V----CARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQI 435
           V    C  K    V    G V+ +G    G LG    G  +  + PR+++SL   +V  +
Sbjct: 79  VYHVDCGVKHAALV-TKNGEVFTWGEESGGRLGH---GSREDSVHPRLVESLAICNVDIV 134

Query: 436 STGLYHTVVVTDRGRLFGFGD 456
           + G +HT  VT  G L+ +GD
Sbjct: 135 ACGEFHTCAVTTAGELYTWGD 155


>gi|301755558|ref|XP_002913646.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein
           ligase HERC6-like [Ailuropoda melanoleuca]
          Length = 1189

 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 89/261 (34%), Positives = 129/261 (49%), Gaps = 6/261 (2%)

Query: 207 PRLVEA-LKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL 265
           PR  +A   G   +Q  +G   +  L   G +H+CG N+ GQLG         PK I  L
Sbjct: 13  PRRRQAGXAGAELRQAASGERHSLLLLSNGELHSCGDNSQGQLGRKGVQRDEHPKRIRTL 72

Query: 266 EEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGE-QHDELQPRAIQTFRRKGIH 324
           + +  V  ++ G  + LAV   G V+++G+GS   LG GE +   L P  I+T    GI 
Sbjct: 73  DNL-RVDLVSCGKEHSLAVCYKGRVFAWGAGSEGQLGVGEFKEINLIPTKIKTL--TGIK 129

Query: 325 VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEI-DKTLPEPLSSLKSHLAVQVCAR 383
           +++VS G  H +AL   G V++WG    G LG G E   +  P+ + SL      QV A 
Sbjct: 130 IIQVSCGHYHSLALSEGGQVFSWGSNSHGQLGLGKECPSQASPQRVRSLDGIPLTQVAAG 189

Query: 384 KRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV 443
              +F L  +G+ +G+G    G L      V  +  +PR + +L+   V  IS G  HT 
Sbjct: 190 GAHSFALSLSGASFGWGSNNAGQLALRQNNVPVQSHKPRSIGALKNLGVIYISCGYEHTA 249

Query: 444 VVTDRGRLFGFGDNERAQLGH 464
           V+T  G++F FG N   QLGH
Sbjct: 250 VLTQTGKVFTFGGNSYGQLGH 270



 Score =  101 bits (251), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 83/301 (27%), Positives = 145/301 (48%), Gaps = 14/301 (4%)

Query: 161 SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQ 220
           + A + Q ++ E H+  +L +G++ +CGDNS    G +   R    P+ +  L  +    
Sbjct: 21  AGAELRQAASGERHSLLLLSNGELHSCGDNSQGQLGRKGVQRDE-HPKRIRTLDNLRVDL 79

Query: 221 VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLD-RPTPKSIAPLEEVGSVVQIAAGPS 279
           V+ G   +  +  +G V   G+ + GQLG G+  +    P  I  L  +  ++Q++ G  
Sbjct: 80  VSCGKEHSLAVCYKGRVFAWGAGSEGQLGVGEFKEINLIPTKIKTLTGI-KIIQVSCGHY 138

Query: 280 YMLAVTGNGVVYSFGSGSNFCLGHGEQ-HDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
           + LA++  G V+S+GS S+  LG G++   +  P+ +++    GI + +V+AG  H  AL
Sbjct: 139 HSLALSEGGQVFSWGSNSHGQLGLGKECPSQASPQRVRSL--DGIPLTQVAAGGAHSFAL 196

Query: 339 DSSGYVYTWGKGYCGALG---HGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGS 395
             SG  + WG    G L    +   +    P  + +LK+   + +      T VL  TG 
Sbjct: 197 SLSGASFGWGSNNAGQLALRQNNVPVQSHKPRSIGALKNLGVIYISCGYEHTAVLTQTGK 256

Query: 396 VYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV-VTDRGRLFGF 454
           V+ FG   +G LG       +    P++++ +    VSQI  G YHT+  V   G++  F
Sbjct: 257 VFTFGGNSYGQLGHSPTAEKEG---PQLVEGIDG-LVSQIDCGSYHTLAYVYTTGKVVSF 312

Query: 455 G 455
           G
Sbjct: 313 G 313



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 81/298 (27%), Positives = 137/298 (45%), Gaps = 23/298 (7%)

Query: 115 QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHVV 166
           Q  +G  H+LL+ SN  + SCG +  G LG         P+  + +   R++        
Sbjct: 27  QAASGERHSLLLLSNGELHSCGDNSQGQLGRKGVQRDEHPKRIRTLDNLRVDL------- 79

Query: 167 QVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN 226
            VS  + H+  V   G+VF  G  S    G  +       P  ++ L G+   QV+ G  
Sbjct: 80  -VSCGKEHSLAVCYKGRVFAWGAGSEGQLGVGEFKEINLIPTKIKTLTGIKIIQVSCGHY 138

Query: 227 FTGFLTIRGHVHTCGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 285
            +  L+  G V + GSN+HGQLG G +   + +P+ +  L+ +  + Q+AAG ++  A++
Sbjct: 139 HSLALSEGGQVFSWGSNSHGQLGLGKECPSQASPQRVRSLDGI-PLTQVAAGGAHSFALS 197

Query: 286 GNGVVYSFGSGSNFCLGHGEQHDELQ---PRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
            +G  + +GS +   L   + +  +Q   PR+I   +  G  V+ +S G EH   L  +G
Sbjct: 198 LSGASFGWGSNNAGQLALRQNNVPVQSHKPRSIGALKNLG--VIYISCGYEHTAVLTQTG 255

Query: 343 YVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 400
            V+T+G    G LGH    +K  P+ +  +   ++   C        +  TG V  FG
Sbjct: 256 KVFTFGGNSYGQLGHSPTAEKEGPQLVEGIDGLVSQIDCGSYHTLAYVYTTGKVVSFG 313



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 65/187 (34%), Positives = 93/187 (49%), Gaps = 6/187 (3%)

Query: 114 MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +Q++ G YH+L +S    VFS GS+  G LG G E     S  R+       + QV+A  
Sbjct: 131 IQVSCGHYHSLALSEGGQVFSWGSNSHGQLGLGKECPSQASPQRVRSLDGIPLTQVAAGG 190

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPI--FRPRLVEALKGVPCKQVTAGLNFTGF 230
            H+  +  SG  F  G N++     R  N P+   +PR + ALK +    ++ G   T  
Sbjct: 191 AHSFALSLSGASFGWGSNNAGQLALRQNNVPVQSHKPRSIGALKNLGVIYISCGYEHTAV 250

Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA-VTGNGV 289
           LT  G V T G N++GQLGH  T ++  P+ +  ++  G V QI  G  + LA V   G 
Sbjct: 251 LTQTGKVFTFGGNSYGQLGHSPTAEKEGPQLVEGID--GLVSQIDCGSYHTLAYVYTTGK 308

Query: 290 VYSFGSG 296
           V SFG G
Sbjct: 309 VVSFGRG 315


>gi|281205822|gb|EFA80011.1| regulator of chromosome condensation domain-containing protein
            [Polysphondylium pallidum PN500]
          Length = 1800

 Score =  123 bits (308), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 88/309 (28%), Positives = 146/309 (47%), Gaps = 15/309 (4%)

Query: 166  VQVSASENHAAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVPCKQVTAG 224
            V V+    H A +   G++FT G+NS    GH  +  +    PR VE  K  P   ++ G
Sbjct: 1035 VSVACGWEHIAVISSDGELFTWGNNSQGQLGHGLNVGKYQSTPRRVETFKSSPIIMISCG 1094

Query: 225  LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 284
               +  +     +++ GS+ +GQLGHG    +  PK I        V+ IA G ++ + +
Sbjct: 1095 GEHSVAVDQSFQIYSWGSSRYGQLGHGVLTPQNLPKKIEDFTGGQKVLAIATGYAHTMVL 1154

Query: 285  TGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH---VVRVSAGDEHVVALDSS 341
              +G +++FG   +  LG G   +   P  I+T    GIH   +  ++AG  H +    +
Sbjct: 1155 KKSGDLFTFGWNDSGQLGLGNFKNRAVPMRIETSEIVGIHGERITAIAAGHSHSIMCLDN 1214

Query: 342  GYVYTWGKGYCGALGHGDEIDKTL-PEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 400
            G +Y+WG    G LGHG+ I+K+L P+ +  LK    +++      T  + +  SVY +G
Sbjct: 1215 GDIYSWGANSKGQLGHGN-IEKSLRPKQIDELKGKPIIKISCGHFHTVAISELNSVYCWG 1273

Query: 401  WMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT------DRGRLFGF 454
                  LG    G +   L P++++      + ++  GLYHT  VT      DRG ++  
Sbjct: 1274 QGEHMCLG---NGSNKNELSPKMIEFFINKKIEKVVCGLYHTATVTAAENGSDRGNVYIC 1330

Query: 455  GDNERAQLG 463
            G  E  +LG
Sbjct: 1331 GGGEHGKLG 1339



 Score =  118 bits (295), Expect = 7e-24,   Method: Composition-based stats.
 Identities = 106/396 (26%), Positives = 174/396 (43%), Gaps = 30/396 (7%)

Query: 106  IVETSAGNMQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAA 163
            +V+     + +  G  H  +IS +  +F+ G++  G LGHG    +  S  R +    ++
Sbjct: 1027 LVKNEKKAVSVACGWEHIAVISSDGELFTWGNNSQGQLGHGLNVGKYQSTPRRVETFKSS 1086

Query: 164  HVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG-VPCKQVT 222
             ++ +S    H+  V QS Q+++ G +     GH     P   P+ +E   G      + 
Sbjct: 1087 PIIMISCGGEHSVAVDQSFQIYSWGSSRYGQLGH-GVLTPQNLPKKIEDFTGGQKVLAIA 1145

Query: 223  AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG----SVVQIAAGP 278
             G   T  L   G + T G N  GQLG G+  +R  P  I   E VG     +  IAAG 
Sbjct: 1146 TGYAHTMVLKKSGDLFTFGWNDSGQLGLGNFKNRAVPMRIETSEIVGIHGERITAIAAGH 1205

Query: 279  SYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
            S+ +    NG +YS+G+ S   LGHG     L+P+ I     KG  ++++S G  H VA+
Sbjct: 1206 SHSIMCLDNGDIYSWGANSKGQLGHGNIEKSLRPKQIDEL--KGKPIIKISCGHFHTVAI 1263

Query: 339  DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSS-LKSHLAVQVCARKRKTFVLV-----D 392
                 VY WG+G    LG+G   ++  P+ +   +   +   VC       V       D
Sbjct: 1264 SELNSVYCWGQGEHMCLGNGSNKNELSPKMIEFFINKKIEKVVCGLYHTATVTAAENGSD 1323

Query: 393  TGSVYGFGWMGFGSLG--------FPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV 444
             G+VY  G    G LG        F D+        P ++ SL + ++   S+G   + +
Sbjct: 1324 RGNVYICGGGEHGKLGTGGDLKTPFFDKP------HPAVIPSLNSMNIVGFSSGSEFSAI 1377

Query: 445  VTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQE 480
            +T+ G L+ +G     Q+G+        PT+I + +
Sbjct: 1378 ITNNGALYTWGYGNFGQIGNGKTEDMWLPTKISLND 1413



 Score =  110 bits (276), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 70/232 (30%), Positives = 114/232 (49%), Gaps = 14/232 (6%)

Query: 252  DTLDRPTPKSIAPL-EEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDEL 310
            D L  P P    PL +     V +A G  ++  ++ +G ++++G+ S   LGHG    + 
Sbjct: 1018 DLLLNPMP----PLVKNEKKAVSVACGWEHIAVISSDGELFTWGNNSQGQLGHGLNVGKY 1073

Query: 311  Q--PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEP 368
            Q  PR ++TF+   I  + +S G EH VA+D S  +Y+WG    G LGHG    + LP+ 
Sbjct: 1074 QSTPRRVETFKSSPI--IMISCGGEHSVAVDQSFQIYSWGSSRYGQLGHGVLTPQNLPKK 1131

Query: 369  LSSLKSHLAVQVCARK-RKTFVLVDTGSVYGFGWMGFGSLG---FPDRGVSDKVLRPRIL 424
            +        V   A     T VL  +G ++ FGW   G LG   F +R V  ++    I+
Sbjct: 1132 IEDFTGGQKVLAIATGYAHTMVLKKSGDLFTFGWNDSGQLGLGNFKNRAVPMRIETSEIV 1191

Query: 425  DSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 476
              +    ++ I+ G  H+++  D G ++ +G N + QLGH  +   L P +I
Sbjct: 1192 -GIHGERITAIAAGHSHSIMCLDNGDIYSWGANSKGQLGHGNIEKSLRPKQI 1242



 Score =  105 bits (263), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 74/272 (27%), Positives = 132/272 (48%), Gaps = 14/272 (5%)

Query: 221  VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDR--PTPKSIAPLEEVGSVVQIAAGP 278
            V  G      ++  G + T G+N+ GQLGHG  + +   TP+ +   +    ++ I+ G 
Sbjct: 1037 VACGWEHIAVISSDGELFTWGNNSQGQLGHGLNVGKYQSTPRRVETFKS-SPIIMISCGG 1095

Query: 279  SYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
             + +AV  +  +YS+GS     LGHG    +  P+ I+ F   G  V+ ++ G  H + L
Sbjct: 1096 EHSVAVDQSFQIYSWGSSRYGQLGHGVLTPQNLPKKIEDFT-GGQKVLAIATGYAHTMVL 1154

Query: 339  DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSS-----LKSHLAVQVCARKRKTFVLVDT 393
              SG ++T+G    G LG G+  ++ +P  + +     +       + A    + + +D 
Sbjct: 1155 KKSGDLFTFGWNDSGQLGLGNFKNRAVPMRIETSEIVGIHGERITAIAAGHSHSIMCLDN 1214

Query: 394  GSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFG 453
            G +Y +G    G LG    G  +K LRP+ +D L+   + +IS G +HTV +++   ++ 
Sbjct: 1215 GDIYSWGANSKGQLG---HGNIEKSLRPKQIDELKGKPIIKISCGHFHTVAISELNSVYC 1271

Query: 454  FGDNERAQLGHDTLRGCLEPT--EIFIQEMEE 483
            +G  E   LG+ + +  L P   E FI +  E
Sbjct: 1272 WGQGEHMCLGNGSNKNELSPKMIEFFINKKIE 1303


>gi|194767960|ref|XP_001966082.1| GF19414 [Drosophila ananassae]
 gi|190622967|gb|EDV38491.1| GF19414 [Drosophila ananassae]
          Length = 5087

 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 100/347 (28%), Positives = 162/347 (46%), Gaps = 8/347 (2%)

Query: 129  SSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCG 188
            S+++  G +  G LG G E ++  + T     S    VQ++  E     V   G++F  G
Sbjct: 4224 STIYGWGHNHRGQLG-GLEGSRIKTPTPCEALSLLRPVQLAGGEQSLFAVTPDGKLFATG 4282

Query: 189  DNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQV--TAGLNFTGFLTIRGHVHTCGSNTHG 246
              S    G   ++     P L+ +L+ V  K+V   +G      LT  G V+  G    G
Sbjct: 4283 YGSGGRLGVGGSDSWAI-PTLLGSLQHVFVKKVAVNSGGKHCLALTTEGEVYAWGEGEDG 4341

Query: 247  QLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ 306
            +LGHG+ +    PK +  L  + SV  IA G ++  A+T +G V ++G G    LGHG+ 
Sbjct: 4342 KLGHGNRVSYDRPKLVEHLHGM-SVADIACGSAHSAAITASGQVLTWGKGRYGRLGHGDS 4400

Query: 307  HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP 366
             D+L+P+ ++         +   +GD   + +     V++WG G  G LG G      LP
Sbjct: 4401 EDQLRPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKLP 4460

Query: 367  EPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDS 426
              + SL     ++V    + +  L  +G+VY +G   F  LG    G  D V RP+ + +
Sbjct: 4461 YKIESLAGLGVIKVECGSQFSVALTKSGAVYTWGKGDFHRLG---HGSVDHVRRPKKVAA 4517

Query: 427  LRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEP 473
            L+   +  I+TG  H V  +D G ++ +GDN+  QLG  T+     P
Sbjct: 4518 LQGKKIISIATGSLHCVACSDSGEVYTWGDNDEGQLGDGTVTAIQRP 4564



 Score =  119 bits (299), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 84/283 (29%), Positives = 137/283 (48%), Gaps = 9/283 (3%)

Query: 166  VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIF-RPRLVEALKGVPCKQVTAG 224
            V V++   H   +   G+V+  G+      GH   NR  + RP+LVE L G+    +  G
Sbjct: 4314 VAVNSGGKHCLALTTEGEVYAWGEGEDGKLGH--GNRVSYDRPKLVEHLHGMSVADIACG 4371

Query: 225  LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSV-VQIAAGPSYMLA 283
               +  +T  G V T G   +G+LGHGD+ D+  PK +  L    ++ +   +G +  L 
Sbjct: 4372 SAHSAAITASGQVLTWGKGRYGRLGHGDSEDQLRPKLVEALLGYRAIDIACGSGDAQTLC 4431

Query: 284  VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 343
            +T +  V+S+G G    LG G       P  I++    G+ V++V  G +  VAL  SG 
Sbjct: 4432 ITDDDNVWSWGDGDYGKLGRGGSDGCKLPYKIESL--AGLGVIKVECGSQFSVALTKSGA 4489

Query: 344  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 403
            VYTWGKG    LGHG       P+ +++L+    + +           D+G VY +G   
Sbjct: 4490 VYTWGKGDFHRLGHGSVDHVRRPKKVAALQGKKIISIATGSLHCVACSDSGEVYTWGDND 4549

Query: 404  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT 446
             G LG    G    + RPR++ +L+  H+ +++ G  HT+ ++
Sbjct: 4550 EGQLG---DGTVTAIQRPRLVSALQGKHIVKVTCGSAHTLALS 4589



 Score =  119 bits (297), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 99/342 (28%), Positives = 159/342 (46%), Gaps = 25/342 (7%)

Query: 114  MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHV------- 165
            + I  G     ++S    VF+CG    G LG G      V++  +  P    V       
Sbjct: 3110 IHIAGGSKSLFIVSQEGRVFACGEGTNGRLGLG------VTYN-VPLPHQLPVLHQYVVK 3162

Query: 166  -VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
             V V +   HA  +   G+VF+ G+      GH +    + +PR VEAL+    + V  G
Sbjct: 3163 KVAVHSGGKHALALTLDGKVFSWGEGEDGKLGHGNRTT-LDKPRQVEALRAKKIRDVACG 3221

Query: 225  LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGP--SYML 282
             + +  ++ +G ++T G   +G+LGHGD   +  PK +A L     VVQ+A G   +  L
Sbjct: 3222 SSHSAAISSQGELYTWGLGEYGRLGHGDNATQLKPKLVAALAGR-RVVQVACGSRDAQTL 3280

Query: 283  AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
            A+T +G V+S+G G    LG G       P  I+  R  GI V+++  G +  +AL  +G
Sbjct: 3281 ALTEDGAVFSWGDGDFGKLGRGGSEGSDTPHEIE--RLSGIGVIQIECGAQFSLALTRAG 3338

Query: 343  YVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWM 402
             V+TWGKG    LGHG +     P+P+  L+    + V         + D+G VY +G  
Sbjct: 3339 EVWTWGKGDYYRLGHGGDQHVRKPQPIGGLRGRRVIHVAVGALHCLAVTDSGQVYAWGDN 3398

Query: 403  GFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV 444
              G  G  +  V+ K   P ++  L    V++++ G  H++ 
Sbjct: 3399 DHGQQGSGNTFVNKK---PALVIGLDDVFVNRVACGSSHSIA 3437



 Score =  114 bits (286), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 88/294 (29%), Positives = 140/294 (47%), Gaps = 17/294 (5%)

Query: 177  FVLQSGQVFTCGDNSSFCCGHRDT-NRPIFRPRLVEALKGVPCKQVT--AGLNFTGFLTI 233
             V Q G+VF CG+ ++   G   T N P+  P  +  L     K+V   +G      LT+
Sbjct: 3121 IVSQEGRVFACGEGTNGRLGLGVTYNVPL--PHQLPVLHQYVVKKVAVHSGGKHALALTL 3178

Query: 234  RGHVHTCGSNTHGQLGHGD--TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
             G V + G    G+LGHG+  TLD+P  + +  L     +  +A G S+  A++  G +Y
Sbjct: 3179 DGKVFSWGEGEDGKLGHGNRTTLDKP--RQVEALR-AKKIRDVACGSSHSAAISSQGELY 3235

Query: 292  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEHVVALDSSGYVYTWGK 349
            ++G G    LGHG+   +L+P+ +      G  VV+V+ G  D   +AL   G V++WG 
Sbjct: 3236 TWGLGEYGRLGHGDNATQLKPKLVAAL--AGRRVVQVACGSRDAQTLALTEDGAVFSWGD 3293

Query: 350  GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGF 409
            G  G LG G       P  +  L     +Q+    + +  L   G V+ +G   +  LG 
Sbjct: 3294 GDFGKLGRGGSEGSDTPHEIERLSGIGVIQIECGAQFSLALTRAGEVWTWGKGDYYRLG- 3352

Query: 410  PDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 463
               G    V +P+ +  LR   V  ++ G  H + VTD G+++ +GDN+  Q G
Sbjct: 3353 --HGGDQHVRKPQPIGGLRGRRVIHVAVGALHCLAVTDSGQVYAWGDNDHGQQG 3404



 Score =  101 bits (252), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 85/284 (29%), Positives = 127/284 (44%), Gaps = 14/284 (4%)

Query: 113  NMQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAH---VVQV 168
             + + +G  H L L +   V++ G    G LGHG      VS+ R       H   V  +
Sbjct: 4313 KVAVNSGGKHCLALTTEGEVYAWGEGEDGKLGHGNR----VSYDRPKLVEHLHGMSVADI 4368

Query: 169  SASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFT 228
            +    H+A +  SGQV T G       GH D+   + RP+LVEAL G     +  G    
Sbjct: 4369 ACGSAHSAAITASGQVLTWGKGRYGRLGHGDSEDQL-RPKLVEALLGYRAIDIACGSGDA 4427

Query: 229  GFLTIRG--HVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTG 286
              L I    +V + G   +G+LG G +     P  I  L  +G V+++  G  + +A+T 
Sbjct: 4428 QTLCITDDDNVWSWGDGDYGKLGRGGSDGCKLPYKIESLAGLG-VIKVECGSQFSVALTK 4486

Query: 287  NGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYT 346
            +G VY++G G    LGHG      +P+ +     +G  ++ ++ G  H VA   SG VYT
Sbjct: 4487 SGAVYTWGKGDFHRLGHGSVDHVRRPKKVAAL--QGKKIISIATGSLHCVACSDSGEVYT 4544

Query: 347  WGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVL 390
            WG    G LG G       P  +S+L+    V+V      T  L
Sbjct: 4545 WGDNDEGQLGDGTVTAIQRPRLVSALQGKHIVKVTCGSAHTLAL 4588



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 81/269 (30%), Positives = 133/269 (49%), Gaps = 15/269 (5%)

Query: 184 VFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 243
            ++ G       GH DT+     P  + AL+    + V  G  ++  +T  G++ T G  
Sbjct: 652 AYSWGAGEDHRLGHGDTHARAV-PTKIAALEQHCVQSVFCGCTYSAVITCGGNLLTWGRG 710

Query: 244 THGQLGHGDTLDRPTPKSIAPLEEVGSV-VQIAAGPSYMLAVTGNGVVYSFGSGSNFCLG 302
           T+ +LGHG++ DR  P  +A L E   V V + +G ++ LA+T  G+V+++G G    LG
Sbjct: 711 TYARLGHGNSDDRCLPTLVAALAEHTVVDVALGSGDAHSLALTSEGLVFAWGDGDYGKLG 770

Query: 303 HGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEID 362
           +G  +  LQP  +++  R    V R+ AG ++ VAL S G VYTWGK  C  LGH   ++
Sbjct: 771 NGNCNGSLQPILVESLPR----VQRIFAGSQYSVALSSEGQVYTWGKATC--LGH-QLVE 823

Query: 363 K-----TLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDK 417
           +     ++P  +SSL+    V +         L  +G V+G+G      +  P    S+ 
Sbjct: 824 RSVQGCSVPRLVSSLQHKRIVDMAVGVAHCLALSSSGEVFGWGRNDCQQV-CPSSVSSEP 882

Query: 418 VLRPRILDSLRAHHVSQISTGLYHTVVVT 446
           +LR  IL +L     S I+     +++ T
Sbjct: 883 LLRSPILVALPTLPASGIACTAGQSLIWT 911



 Score = 91.7 bits (226), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 78/304 (25%), Positives = 132/304 (43%), Gaps = 23/304 (7%)

Query: 164 HVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTA 223
            V QV  SEN    + Q G++                ++P   P+ +E         +  
Sbjct: 588 QVKQVVCSENQVLLLSQEGKLHAW-----------RLSKPEAEPQPLEEAGHETFISIAG 636

Query: 224 GLNFTGFLTIRGH--VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 281
                 F+ I  +   ++ G+    +LGHGDT  R  P  IA LE+   V  +  G +Y 
Sbjct: 637 HCEGRHFMAIDSNHNAYSWGAGEDHRLGHGDTHARAVPTKIAALEQ-HCVQSVFCGCTYS 695

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 341
             +T  G + ++G G+   LGHG   D   P  +       +  V + +GD H +AL S 
Sbjct: 696 AVITCGGNLLTWGRGTYARLGHGNSDDRCLPTLVAALAEHTVVDVALGSGDAHSLALTSE 755

Query: 342 GYVYTWGKGYCGALGHGD---EIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYG 398
           G V+ WG G  G LG+G+    +   L E L  ++     ++ A  + +  L   G VY 
Sbjct: 756 GLVFAWGDGDYGKLGNGNCNGSLQPILVESLPRVQ-----RIFAGSQYSVALSSEGQVYT 810

Query: 399 FGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNE 458
           +G          +R V    + PR++ SL+   +  ++ G+ H + ++  G +FG+G N+
Sbjct: 811 WGKATCLGHQLVERSVQGCSV-PRLVSSLQHKRIVDMAVGVAHCLALSSSGEVFGWGRND 869

Query: 459 RAQL 462
             Q+
Sbjct: 870 CQQV 873



 Score = 89.4 bits (220), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 75/258 (29%), Positives = 125/258 (48%), Gaps = 16/258 (6%)

Query: 224  GLNFTGFLTIRGHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSY 280
             L++ G  TI G  H    N  GQLG   G  +  PTP ++++ L  V    Q+A G   
Sbjct: 4217 ALSWGGASTIYGWGH----NHRGQLGGLEGSRIKTPTPCEALSLLRPV----QLAGGEQS 4268

Query: 281  MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 340
            + AVT +G +++ G GS   LG G       P  + + +   +  V V++G +H +AL +
Sbjct: 4269 LFAVTPDGKLFATGYGSGGRLGVGGSDSWAIPTLLGSLQHVFVKKVAVNSGGKHCLALTT 4328

Query: 341  SGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 400
             G VY WG+G  G LGHG+ +    P+ +  L       +      +  +  +G V  +G
Sbjct: 4329 EGEVYAWGEGEDGKLGHGNRVSYDRPKLVEHLHGMSVADIACGSAHSAAITASGQVLTWG 4388

Query: 401  WMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDNE 458
               +G LG  D   S+  LRP+++++L  +    I+  +G   T+ +TD   ++ +GD +
Sbjct: 4389 KGRYGRLGHGD---SEDQLRPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGD 4445

Query: 459  RAQLGHDTLRGCLEPTEI 476
              +LG     GC  P +I
Sbjct: 4446 YGKLGRGGSDGCKLPYKI 4463



 Score = 89.0 bits (219), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 68/245 (27%), Positives = 113/245 (46%), Gaps = 12/245 (4%)

Query: 237  VHTCGSNTHGQLG--HGDTLDRPT-PKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
            V   G N   QLG   G  +  PT  ++I+ L  +     IA G   +  V+  G V++ 
Sbjct: 3076 VMVWGLNDKEQLGGLKGSKVKVPTFSQTISRLRPI----HIAGGSKSLFIVSQEGRVFAC 3131

Query: 294  GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 353
            G G+N  LG G  ++   P  +    +  +  V V +G +H +AL   G V++WG+G  G
Sbjct: 3132 GEGTNGRLGLGVTYNVPLPHQLPVLHQYVVKKVAVHSGGKHALALTLDGKVFSWGEGEDG 3191

Query: 354  ALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRG 413
             LGHG+      P  + +L++     V      +  +   G +Y +G   +G LG  D  
Sbjct: 3192 KLGHGNRTTLDKPRQVEALRAKKIRDVACGSSHSAAISSQGELYTWGLGEYGRLGHGDNA 3251

Query: 414  VSDKVLRPRILDSLRAHHVSQISTGL--YHTVVVTDRGRLFGFGDNERAQLGHDTLRGCL 471
                 L+P+++ +L    V Q++ G     T+ +T+ G +F +GD +  +LG     G  
Sbjct: 3252 TQ---LKPKLVAALAGRRVVQVACGSRDAQTLALTEDGAVFSWGDGDFGKLGRGGSEGSD 3308

Query: 472  EPTEI 476
             P EI
Sbjct: 3309 TPHEI 3313



 Score = 65.1 bits (157), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 41/142 (28%), Positives = 72/142 (50%), Gaps = 5/142 (3%)

Query: 334 HVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDT 393
           H +A+DS+   Y+WG G    LGHGD   + +P  +++L+ H    V      + V+   
Sbjct: 642 HFMAIDSNHNAYSWGAGEDHRLGHGDTHARAVPTKIAALEQHCVQSVFCGCTYSAVITCG 701

Query: 394 GSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRL 451
           G++  +G   +  LG    G SD    P ++ +L  H V  ++  +G  H++ +T  G +
Sbjct: 702 GNLLTWGRGTYARLG---HGNSDDRCLPTLVAALAEHTVVDVALGSGDAHSLALTSEGLV 758

Query: 452 FGFGDNERAQLGHDTLRGCLEP 473
           F +GD +  +LG+    G L+P
Sbjct: 759 FAWGDGDYGKLGNGNCNGSLQP 780


>gi|414878660|tpg|DAA55791.1| TPA: putative regulator of chromosome condensation (RCC1) family
           protein [Zea mays]
          Length = 964

 Score =  123 bits (308), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 95/301 (31%), Positives = 142/301 (47%), Gaps = 21/301 (6%)

Query: 189 DNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTH--G 246
           D  +  CG R       + +L++AL  +  + V  G   T  +T+ G ++T G  T   G
Sbjct: 208 DVQNISCGGRHAALVTKQAKLIDALSHMNIELVACGEYHTCAVTLSGDLYTWGDGTFKFG 267

Query: 247 QLGHGDTLDRPTPKSI-APLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGE 305
            LGHG+ +    PK +  PLE +  V  I+ GP +   VT  G +++FG GS   LGHG+
Sbjct: 268 LLGHGNDVSHWVPKHVNGPLEGI-HVSSISCGPWHTALVTSAGQLFTFGDGSFGVLGHGD 326

Query: 306 QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL------------DSSGYVYTWGKGYCG 353
           +     PR +++   KG+  VR + G  H  A+             SSG ++TWG G  G
Sbjct: 327 RESISVPREVESL--KGLRTVRAACGVWHTAAVVEVMSVNSNSSNCSSGKIFTWGDGDKG 384

Query: 354 ALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRG 413
            LGHGD+  K +P  +++L      QV      T  L  +G VY  G   +G LG     
Sbjct: 385 RLGHGDKEPKLVPTCVAALVEPNFCQVACGHCLTVALTTSGHVYTMGSAVYGQLG---NA 441

Query: 414 VSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEP 473
            +D +L  R+   L  + V +IS G YH  V+T R  ++ +G     +LGH        P
Sbjct: 442 QADGMLPVRVEGKLYKNFVEEISCGAYHVAVLTSRTEVYTWGKGANGRLGHGDTEDKNTP 501

Query: 474 T 474
           T
Sbjct: 502 T 502



 Score =  115 bits (287), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 94/274 (34%), Positives = 128/274 (46%), Gaps = 21/274 (7%)

Query: 116 ITTGRYHTLLISNSS---VFSCGSSLCGVLGHGPETTQCVSFTRINFP-SAAHVVQVSAS 171
           +  G YHT  ++ S     +  G+   G+LGHG + +  V    +N P    HV  +S  
Sbjct: 240 VACGEYHTCAVTLSGDLYTWGDGTFKFGLLGHGNDVSHWVP-KHVNGPLEGIHVSSISCG 298

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
             H A V  +GQ+FT GD S    GH D    I  PR VE+LKG+   +   G+  T  +
Sbjct: 299 PWHTALVTSAGQLFTFGDGSFGVLGHGD-RESISVPREVESLKGLRTVRAACGVWHTAAV 357

Query: 232 T------------IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPS 279
                          G + T G    G+LGHGD   +  P  +A L E  +  Q+A G  
Sbjct: 358 VEVMSVNSNSSNCSSGKIFTWGDGDKGRLGHGDKEPKLVPTCVAALVEP-NFCQVACGHC 416

Query: 280 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 339
             +A+T +G VY+ GS     LG+  Q D + P  ++    K   V  +S G  HV  L 
Sbjct: 417 LTVALTTSGHVYTMGSAVYGQLGNA-QADGMLPVRVEGKLYKNF-VEEISCGAYHVAVLT 474

Query: 340 SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
           S   VYTWGKG  G LGHGD  DK  P  + +LK
Sbjct: 475 SRTEVYTWGKGANGRLGHGDTEDKNTPTLVEALK 508



 Score = 77.8 bits (190), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 68/225 (30%), Positives = 103/225 (45%), Gaps = 18/225 (8%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSASEN 173
           I+ G +HT L++++  +F+ G    GVLGHG    + +S  R +        V+ +    
Sbjct: 295 ISCGPWHTALVTSAGQLFTFGDGSFGVLGHGDR--ESISVPREVESLKGLRTVRAACGVW 352

Query: 174 HAAFVLQ------------SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQV 221
           H A V++            SG++FT GD      GH D   P   P  V AL      QV
Sbjct: 353 HTAAVVEVMSVNSNSSNCSSGKIFTWGDGDKGRLGHGD-KEPKLVPTCVAALVEPNFCQV 411

Query: 222 TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 281
             G   T  LT  GHV+T GS  +GQLG+    D   P  +        V +I+ G  ++
Sbjct: 412 ACGHCLTVALTTSGHVYTMGSAVYGQLGNAQA-DGMLPVRVEGKLYKNFVEEISCGAYHV 470

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVV 326
             +T    VY++G G+N  LGHG+  D+  P  ++  + K +  V
Sbjct: 471 AVLTSRTEVYTWGKGANGRLGHGDTEDKNTPTLVEALKDKQVRNV 515



 Score = 43.5 bits (101), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 37/106 (34%), Positives = 52/106 (49%), Gaps = 5/106 (4%)

Query: 374 SHLAVQVCA-RKRKTFVLVDTGSVY--GFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAH 430
           SH+ +++ A  +  T  +  +G +Y  G G   FG LG  +  VS  V +  +   L   
Sbjct: 233 SHMNIELVACGEYHTCAVTLSGDLYTWGDGTFKFGLLGHGN-DVSHWVPK-HVNGPLEGI 290

Query: 431 HVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 476
           HVS IS G +HT +VT  G+LF FGD     LGH        P E+
Sbjct: 291 HVSSISCGPWHTALVTSAGQLFTFGDGSFGVLGHGDRESISVPREV 336



 Score = 40.0 bits (92), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 38/128 (29%), Positives = 58/128 (45%), Gaps = 11/128 (8%)

Query: 115 QITTGRYHTLLISNSS-VFSCGSSLCGVLGH----GPETTQCVSFTRINFPSAAHVVQVS 169
           Q+  G   T+ ++ S  V++ GS++ G LG+    G    +       NF     V ++S
Sbjct: 410 QVACGHCLTVALTTSGHVYTMGSAVYGQLGNAQADGMLPVRVEGKLYKNF-----VEEIS 464

Query: 170 ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
               H A +    +V+T G  ++   GH DT      P LVEALK    + V  G+NFT 
Sbjct: 465 CGAYHVAVLTSRTEVYTWGKGANGRLGHGDTEDK-NTPTLVEALKDKQVRNVVCGINFTA 523

Query: 230 FLTIRGHV 237
            + I   V
Sbjct: 524 AICIHKWV 531


>gi|262368177|pdb|3KCI|A Chain A, The Third Rld Domain Of Herc2
          Length = 389

 Score =  123 bits (308), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 99/359 (27%), Positives = 164/359 (45%), Gaps = 8/359 (2%)

Query: 117 TTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
           ++GR +     + +++  G +  G LG G E  +    T     +    VQ+   E    
Sbjct: 8   SSGRENLYFQGSGTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLF 66

Query: 177 FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQV--TAGLNFTGFLTIR 234
            V   G+++  G  +    G   T   +  P L+E+++ V  K+V   +G      L+  
Sbjct: 67  AVTADGKLYATGYGAGGRLGIGGTE-SVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSE 125

Query: 235 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 294
           G V++ G    G+LGHG+      P+ I  L  +  VV +AAG ++   VT  G +Y++G
Sbjct: 126 GEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGI-EVVDVAAGGAHSACVTAAGDLYTWG 184

Query: 295 SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGA 354
            G    LGH +  D+L+P+ ++  +   +  +   +GD   + L     V++WG G  G 
Sbjct: 185 KGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGK 244

Query: 355 LGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGV 414
           LG G      +P  + SL     V+V    + +  L  +G+VY +G   +  LG    G 
Sbjct: 245 LGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGH---GS 301

Query: 415 SDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEP 473
            D V RPR +  L+   V  I+TG  H V  T+ G ++ +GDN+  QLG  T      P
Sbjct: 302 DDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRP 360



 Score =  122 bits (307), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 86/281 (30%), Positives = 139/281 (49%), Gaps = 9/281 (3%)

Query: 166 VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 225
           V V++   H   +   G+V++ G+      GH + + P  RPR++E+L+G+    V AG 
Sbjct: 110 VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRS-PCDRPRVIESLRGIEVVDVAAGG 168

Query: 226 NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA--AGPSYMLA 283
             +  +T  G ++T G   +G+LGH D+ D+  PK +  L+    VV IA  +G +  L 
Sbjct: 169 AHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGH-RVVDIACGSGDAQTLC 227

Query: 284 VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 343
           +T +  V+S+G G    LG G       P  I +    G+ VV+V  G +  VAL  SG 
Sbjct: 228 LTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL--TGLGVVKVECGSQFSVALTKSGA 285

Query: 344 VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 403
           VYTWGKG    LGHG +     P  +  L+    + +           + G VY +G   
Sbjct: 286 VYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDND 345

Query: 404 FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV 444
            G LG    G ++ + RPR++ +L+   V++++ G  HT+ 
Sbjct: 346 EGQLG---DGTTNAIQRPRLVAALQGKKVNRVACGSAHTLA 383



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 82/257 (31%), Positives = 128/257 (49%), Gaps = 16/257 (6%)

Query: 225 LNFTGFLTIRGHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYM 281
           L F G  TI G  H    N  GQLG   G  +  PTP +++A L  V    Q+  G   +
Sbjct: 14  LYFQGSGTIYGWGH----NHRGQLGGIEGAKVKVPTPCEALATLRPV----QLIGGEQTL 65

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 341
            AVT +G +Y+ G G+   LG G       P  +++ +   I  V V++G +H +AL S 
Sbjct: 66  FAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSE 125

Query: 342 GYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGW 401
           G VY+WG+   G LGHG+      P  + SL+    V V A    +  +   G +Y +G 
Sbjct: 126 GEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGK 185

Query: 402 MGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDNER 459
             +G LG  D   S+  L+P+++++L+ H V  I+  +G   T+ +TD   ++ +GD + 
Sbjct: 186 GRYGRLGHSD---SEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDY 242

Query: 460 AQLGHDTLRGCLEPTEI 476
            +LG     GC  P +I
Sbjct: 243 GKLGRGGSDGCKVPMKI 259



 Score = 70.1 bits (170), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 74/284 (26%), Positives = 113/284 (39%), Gaps = 60/284 (21%)

Query: 113 NMQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSAS 171
            + + +G  H L L S   V+S G +  G LGHG   + C     I       VV V+A 
Sbjct: 109 KVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHG-NRSPCDRPRVIESLRGIEVVDVAAG 167

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG---------------- 215
             H+A V  +G ++T G       GH D+   + +P+LVEAL+G                
Sbjct: 168 GAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQL-KPKLVEALQGHRVVDIACGSGDAQTL 226

Query: 216 ----------------------------VPCK----------QVTAGLNFTGFLTIRGHV 237
                                       VP K          +V  G  F+  LT  G V
Sbjct: 227 CLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAV 286

Query: 238 HTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 297
           +T G   + +LGHG       P+ +  L+    V+ IA G  + +  T +G VY++G   
Sbjct: 287 YTWGKGDYHRLGHGSDDHVRRPRQVQGLQGK-KVIAIATGSLHCVCCTEDGEVYTWGDND 345

Query: 298 NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 341
              LG G  +   +PR +   + K ++  RV+ G  H +A  +S
Sbjct: 346 EGQLGDGTTNAIQRPRLVAALQGKKVN--RVACGSAHTLAWSTS 387


>gi|427782019|gb|JAA56461.1| Putative hect e3 ubiquitin ligase hect e3 ubiquitin ligase
           [Rhipicephalus pulchellus]
          Length = 1480

 Score =  123 bits (308), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 91/315 (28%), Positives = 149/315 (47%), Gaps = 7/315 (2%)

Query: 161 SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQ 220
           SA   +QV   E     V   G+V+  G  +    G   T+  +  P L+E+L+ V  K+
Sbjct: 612 SALRPIQVVGGEQTLFAVTADGKVYATGYGAGGRLGIGGTDS-VSCPTLLESLQHVFIKK 670

Query: 221 V--TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGP 278
           V   +G      L+  G V++ G    G+LGHG+      P+ I  L     VV +A G 
Sbjct: 671 VVVNSGGKHCLALSAEGEVYSWGEGDDGKLGHGNKSSCERPRVIESLRG-KEVVDVACGG 729

Query: 279 SYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
           ++   +T +G +Y++G G    LGHG+  D+L+P+ ++      +  V   +GD   + +
Sbjct: 730 AHSACITASGELYTWGKGRYGRLGHGDSDDQLRPKKVEALSGWRVRCVACGSGDAQTLCV 789

Query: 339 DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYG 398
                V++WG G  G LG G      +P  +  L+    ++V    + +  L  +GSVY 
Sbjct: 790 TDDDCVWSWGDGDYGKLGRGGSDGCKVPLRVDLLQGMGVIRVECGSQFSVALTASGSVYT 849

Query: 399 FGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNE 458
           +G   +  LG    G  D V RP+ + +L+   V  I+ G  H V  TD G ++ +GDN+
Sbjct: 850 WGKGDYHRLG---HGTDDHVRRPKRVAALQGKKVICIAVGSLHCVACTDTGEVYTWGDND 906

Query: 459 RAQLGHDTLRGCLEP 473
             QLG  T+    +P
Sbjct: 907 EGQLGDGTVNAIHKP 921



 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 86/282 (30%), Positives = 139/282 (49%), Gaps = 11/282 (3%)

Query: 166 VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 225
           V V++   H   +   G+V++ G+      GH + +    RPR++E+L+G     V  G 
Sbjct: 671 VVVNSGGKHCLALSAEGEVYSWGEGDDGKLGHGNKSS-CERPRVIESLRGKEVVDVACGG 729

Query: 226 NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA---GPSYML 282
             +  +T  G ++T G   +G+LGHGD+ D+  PK +  L   G  V+  A   G +  L
Sbjct: 730 AHSACITASGELYTWGKGRYGRLGHGDSDDQLRPKKVEALS--GWRVRCVACGSGDAQTL 787

Query: 283 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
            VT +  V+S+G G    LG G       P  +     +G+ V+RV  G +  VAL +SG
Sbjct: 788 CVTDDDCVWSWGDGDYGKLGRGGSDGCKVPLRVDLL--QGMGVIRVECGSQFSVALTASG 845

Query: 343 YVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWM 402
            VYTWGKG    LGHG +     P+ +++L+    + +           DTG VY +G  
Sbjct: 846 SVYTWGKGDYHRLGHGTDDHVRRPKRVAALQGKKVICIAVGSLHCVACTDTGEVYTWGDN 905

Query: 403 GFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV 444
             G LG    G  + + +PR++ +L+   ++++S G  HTV 
Sbjct: 906 DEGQLG---DGTVNAIHKPRLVAALQGKKINRVSCGSAHTVA 944



 Score =  104 bits (260), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 85/263 (32%), Positives = 127/263 (48%), Gaps = 8/263 (3%)

Query: 207 PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 266
           P   EAL  +   QV  G      +T  G V+  G    G+LG G T     P  +  L+
Sbjct: 605 PMPCEALSALRPIQVVGGEQTLFAVTADGKVYATGYGAGGRLGIGGTDSVSCPTLLESLQ 664

Query: 267 EVG-SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHV 325
            V    V + +G  + LA++  G VYS+G G +  LGHG +    +PR I++ R  G  V
Sbjct: 665 HVFIKKVVVNSGGKHCLALSAEGEVYSWGEGDDGKLGHGNKSSCERPRVIESLR--GKEV 722

Query: 326 VRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLA--VQVCAR 383
           V V+ G  H   + +SG +YTWGKG  G LGHGD  D+  P+ + +L       V   + 
Sbjct: 723 VDVACGGAHSACITASGELYTWGKGRYGRLGHGDSDDQLRPKKVEALSGWRVRCVACGSG 782

Query: 384 KRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV 443
             +T  + D   V+ +G   +G LG   RG SD    P  +D L+   V ++  G   +V
Sbjct: 783 DAQTLCVTDDDCVWSWGDGDYGKLG---RGGSDGCKVPLRVDLLQGMGVIRVECGSQFSV 839

Query: 444 VVTDRGRLFGFGDNERAQLGHDT 466
            +T  G ++ +G  +  +LGH T
Sbjct: 840 ALTASGSVYTWGKGDYHRLGHGT 862



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 77/246 (31%), Positives = 120/246 (48%), Gaps = 8/246 (3%)

Query: 116 ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           + +G  H L +S    V+S G    G LGHG +++ C     I       VV V+    H
Sbjct: 673 VNSGGKHCLALSAEGEVYSWGEGDDGKLGHGNKSS-CERPRVIESLRGKEVVDVACGGAH 731

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG--VPCKQVTAGLNFTGFLT 232
           +A +  SG+++T G       GH D++  + RP+ VEAL G  V C    +G   T  +T
Sbjct: 732 SACITASGELYTWGKGRYGRLGHGDSDDQL-RPKKVEALSGWRVRCVACGSGDAQTLCVT 790

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
               V + G   +G+LG G +     P  +  L+ +G V+++  G  + +A+T +G VY+
Sbjct: 791 DDDCVWSWGDGDYGKLGRGGSDGCKVPLRVDLLQGMG-VIRVECGSQFSVALTASGSVYT 849

Query: 293 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 352
           +G G    LGHG      +P+ +     +G  V+ ++ G  H VA   +G VYTWG    
Sbjct: 850 WGKGDYHRLGHGTDDHVRRPKRVAAL--QGKKVICIAVGSLHCVACTDTGEVYTWGDNDE 907

Query: 353 GALGHG 358
           G LG G
Sbjct: 908 GQLGDG 913



 Score = 92.0 bits (227), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 74/247 (29%), Positives = 121/247 (48%), Gaps = 12/247 (4%)

Query: 235 GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
           G +   G N  GQLG   G  +  P P ++++ L  +    Q+  G   + AVT +G VY
Sbjct: 581 GTILGWGHNHRGQLGGVEGAKVKLPMPCEALSALRPI----QVVGGEQTLFAVTADGKVY 636

Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 351
           + G G+   LG G       P  +++ +   I  V V++G +H +AL + G VY+WG+G 
Sbjct: 637 ATGYGAGGRLGIGGTDSVSCPTLLESLQHVFIKKVVVNSGGKHCLALSAEGEVYSWGEGD 696

Query: 352 CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 411
            G LGHG++     P  + SL+    V V      +  +  +G +Y +G   +G LG   
Sbjct: 697 DGKLGHGNKSSCERPRVIESLRGKEVVDVACGGAHSACITASGELYTWGKGRYGRLG--- 753

Query: 412 RGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG 469
            G SD  LRP+ +++L    V  ++  +G   T+ VTD   ++ +GD +  +LG     G
Sbjct: 754 HGDSDDQLRPKKVEALSGWRVRCVACGSGDAQTLCVTDDDCVWSWGDGDYGKLGRGGSDG 813

Query: 470 CLEPTEI 476
           C  P  +
Sbjct: 814 CKVPLRV 820



 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 37/138 (26%), Positives = 66/138 (47%), Gaps = 5/138 (3%)

Query: 341 SGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 400
           SG +  WG  + G LG  +     LP P  +L +   +QV   ++  F +   G VY   
Sbjct: 580 SGTILGWGHNHRGQLGGVEGAKVKLPMPCEALSALRPIQVVGGEQTLFAVTADGKVYA-- 637

Query: 401 WMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQ--ISTGLYHTVVVTDRGRLFGFGDNE 458
             G+G+ G    G +D V  P +L+SL+   + +  +++G  H + ++  G ++ +G+ +
Sbjct: 638 -TGYGAGGRLGIGGTDSVSCPTLLESLQHVFIKKVVVNSGGKHCLALSAEGEVYSWGEGD 696

Query: 459 RAQLGHDTLRGCLEPTEI 476
             +LGH     C  P  I
Sbjct: 697 DGKLGHGNKSSCERPRVI 714



 Score = 49.3 bits (116), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 43/150 (28%), Positives = 65/150 (43%), Gaps = 3/150 (2%)

Query: 118 TGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
           +G   TL +++   V+S G    G LG G  +  C    R++      V++V      + 
Sbjct: 781 SGDAQTLCVTDDDCVWSWGDGDYGKLGRG-GSDGCKVPLRVDLLQGMGVIRVECGSQFSV 839

Query: 177 FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
            +  SG V+T G       GH  T+  + RP+ V AL+G     +  G       T  G 
Sbjct: 840 ALTASGSVYTWGKGDYHRLGH-GTDDHVRRPKRVAALQGKKVICIAVGSLHCVACTDTGE 898

Query: 237 VHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 266
           V+T G N  GQLG G       P+ +A L+
Sbjct: 899 VYTWGDNDEGQLGDGTVNAIHKPRLVAALQ 928


>gi|355694504|gb|AER99691.1| hect domain and RLD 6 [Mustela putorius furo]
          Length = 1014

 Score =  123 bits (308), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 92/274 (33%), Positives = 134/274 (48%), Gaps = 6/274 (2%)

Query: 199 DTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPT 258
           +TNRP    R      G   +Q  +G   +  L   G +H+ G N+HGQLG  D   +  
Sbjct: 6   NTNRPGPLRRRPAGRGGAELRQAASGERHSLLLLSNGELHSYGDNSHGQLGRRDVQRQEQ 65

Query: 259 PKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHD-ELQPRAIQT 317
           PK I  LE +  V  ++ G  + LAV   G V+++G+GS   LG GE ++  L PR I+T
Sbjct: 66  PKRIPALETL-RVDLVSCGKEHSLAVCYKGRVFAWGAGSEGQLGIGEFNEINLIPRKIKT 124

Query: 318 FRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEI-DKTLPEPLSSLKSHL 376
                I +++VS G  H +AL   G ++TWG    G LG G E   +  P+ +  L    
Sbjct: 125 L--TDIKIIQVSCGHHHSLALSEDGRLFTWGSNSHGQLGLGKECPSQASPQRVQFLDGIP 182

Query: 377 AVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSD-KVLRPRILDSLRAHHVSQI 435
             QV A    +F L  +G+ +G+G    G L    + V   +  +P  +D+L    V  I
Sbjct: 183 LTQVAAGGAHSFALSLSGASFGWGSNSEGQLALRKKNVPVVQSSKPCSVDALENLGVVYI 242

Query: 436 STGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG 469
           S G  HT V+T  G++F FG N   QLG+    G
Sbjct: 243 SCGYEHTAVLTQTGKVFTFGGNSYGQLGYSPTAG 276



 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 86/301 (28%), Positives = 152/301 (50%), Gaps = 17/301 (5%)

Query: 163 AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 222
           A + Q ++ E H+  +L +G++ + GDNS    G RD  R   +P+ + AL+ +    V+
Sbjct: 23  AELRQAASGERHSLLLLSNGELHSYGDNSHGQLGRRDVQRQE-QPKRIPALETLRVDLVS 81

Query: 223 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLD-RPTPKSIAPLEEVGSVVQIAAGPSYM 281
            G   +  +  +G V   G+ + GQLG G+  +    P+ I  L ++  ++Q++ G  + 
Sbjct: 82  CGKEHSLAVCYKGRVFAWGAGSEGQLGIGEFNEINLIPRKIKTLTDI-KIIQVSCGHHHS 140

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQ-HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 340
           LA++ +G ++++GS S+  LG G++   +  P+ +Q     GI + +V+AG  H  AL  
Sbjct: 141 LALSEDGRLFTWGSNSHGQLGLGKECPSQASPQRVQFL--DGIPLTQVAAGGAHSFALSL 198

Query: 341 SGYVYTWGKGYCGALGHGDE----IDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSV 396
           SG  + WG    G L    +    +  + P  + +L++   V +      T VL  TG V
Sbjct: 199 SGASFGWGSNSEGQLALRKKNVPVVQSSKPCSVDALENLGVVYISCGYEHTAVLTQTGKV 258

Query: 397 YGFGWMGFGSLGF-PDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV-VTDRGRLFGF 454
           + FG   +G LG+ P  G       P++++ +    VSQI  G YHT+  V   G++  F
Sbjct: 259 FTFGGNSYGQLGYSPTAGKEG----PQLVEGIDG-LVSQIDCGSYHTLAYVYTTGKVVSF 313

Query: 455 G 455
           G
Sbjct: 314 G 314



 Score = 82.4 bits (202), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 81/292 (27%), Positives = 133/292 (45%), Gaps = 10/292 (3%)

Query: 115 QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
           Q  +G  H+LL+ SN  + S G +  G LG      Q     RI       V  VS  + 
Sbjct: 27  QAASGERHSLLLLSNGELHSYGDNSHGQLGRRDVQRQ-EQPKRIPALETLRVDLVSCGKE 85

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
           H+  V   G+VF  G  S    G  + N     PR ++ L  +   QV+ G + +  L+ 
Sbjct: 86  HSLAVCYKGRVFAWGAGSEGQLGIGEFNEINLIPRKIKTLTDIKIIQVSCGHHHSLALSE 145

Query: 234 RGHVHTCGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
            G + T GSN+HGQLG G +   + +P+ +  L+ +  + Q+AAG ++  A++ +G  + 
Sbjct: 146 DGRLFTWGSNSHGQLGLGKECPSQASPQRVQFLDGI-PLTQVAAGGAHSFALSLSGASFG 204

Query: 293 FGSGSNFCLGHGEQHDEL----QPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 348
           +GS S   L   +++  +    +P ++      G  VV +S G EH   L  +G V+T+G
Sbjct: 205 WGSNSEGQLALRKKNVPVVQSSKPCSVDALENLG--VVYISCGYEHTAVLTQTGKVFTFG 262

Query: 349 KGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 400
               G LG+     K  P+ +  +   ++   C        +  TG V  FG
Sbjct: 263 GNSYGQLGYSPTAGKEGPQLVEGIDGLVSQIDCGSYHTLAYVYTTGKVVSFG 314


>gi|449522147|ref|XP_004168089.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3-like, partial
           [Cucumis sativus]
          Length = 302

 Score =  123 bits (308), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 78/225 (34%), Positives = 116/225 (51%), Gaps = 6/225 (2%)

Query: 240 CGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNF 299
            G N +GQLG G T D   P+ I   E + S+  +AAG  +  AVT +G ++ +G G   
Sbjct: 1   WGRNQNGQLGLGTTEDSLVPQKIQAFEGI-SIKMVAAGAEHTAAVTEDGELFGWGWGRYG 59

Query: 300 CLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGD 359
            LG G+++D L P+ + +    G  +V V+ G  H +++ S G +YT+G    G LGHGD
Sbjct: 60  NLGLGDRNDRLVPQKVSSV--DGDKMVMVACGWRHTISVSSLGGLYTYGWSKYGQLGHGD 117

Query: 360 EIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVL 419
             D+ +P  L +L+     Q+    R T  L   G +YG+GW  FG +G  D   +    
Sbjct: 118 FEDRLVPHRLEALRGDNISQISGGWRHTMALTTDGKLYGWGWNKFGQVGAGD---NIDHC 174

Query: 420 RPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 464
            P  +   +   V QIS G  HT+ VTD+  +F +G     QLGH
Sbjct: 175 SPIQIKFPQDQKVIQISCGWRHTLAVTDKQNVFSWGRGTNGQLGH 219



 Score = 93.2 bits (230), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 70/239 (29%), Positives = 113/239 (47%), Gaps = 5/239 (2%)

Query: 134 CGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSF 193
            G +  G LG G  T   +   +I       +  V+A   H A V + G++F  G     
Sbjct: 1   WGRNQNGQLGLG-TTEDSLVPQKIQAFEGISIKMVAAGAEHTAAVTEDGELFGWGWGRYG 59

Query: 194 CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDT 253
             G  D N  +  P+ V ++ G     V  G   T  ++  G ++T G + +GQLGHGD 
Sbjct: 60  NLGLGDRNDRLV-PQKVSSVDGDKMVMVACGWRHTISVSSLGGLYTYGWSKYGQLGHGDF 118

Query: 254 LDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPR 313
            DR  P  +  L    ++ QI+ G  + +A+T +G +Y +G      +G G+  D   P 
Sbjct: 119 EDRLVPHRLEALRG-DNISQISGGWRHTMALTTDGKLYGWGWNKFGQVGAGDNIDHCSP- 176

Query: 314 AIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSL 372
            IQ    +   V+++S G  H +A+     V++WG+G  G LGHG+ +D+  P  L +L
Sbjct: 177 -IQIKFPQDQKVIQISCGWRHTLAVTDKQNVFSWGRGTNGQLGHGESVDRNTPMILEAL 234



 Score = 82.4 bits (202), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 63/209 (30%), Positives = 97/209 (46%), Gaps = 6/209 (2%)

Query: 116 ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           +  G  HT  ++ +  +F  G    G LG G    + V   +++      +V V+    H
Sbjct: 34  VAAGAEHTAAVTEDGELFGWGWGRYGNLGLGDRNDRLVP-QKVSSVDGDKMVMVACGWRH 92

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 234
              V   G ++T G +     GH D    +  P  +EAL+G    Q++ G   T  LT  
Sbjct: 93  TISVSSLGGLYTYGWSKYGQLGHGDFEDRLV-PHRLEALRGDNISQISGGWRHTMALTTD 151

Query: 235 GHVHTCGSNTHGQLGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
           G ++  G N  GQ+G GD +D  +P  I  P ++   V+QI+ G  + LAVT    V+S+
Sbjct: 152 GKLYGWGWNKFGQVGAGDNIDHCSPIQIKFPQDQ--KVIQISCGWRHTLAVTDKQNVFSW 209

Query: 294 GSGSNFCLGHGEQHDELQPRAIQTFRRKG 322
           G G+N  LGHGE  D   P  ++     G
Sbjct: 210 GRGTNGQLGHGESVDRNTPMILEALSVDG 238



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 36/127 (28%), Positives = 65/127 (51%), Gaps = 3/127 (2%)

Query: 347 WGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGS 406
           WG+   G LG G   D  +P+ + + +      V A    T  + + G ++G+GW  +G+
Sbjct: 1   WGRNQNGQLGLGTTEDSLVPQKIQAFEGISIKMVAAGAEHTAAVTEDGELFGWGWGRYGN 60

Query: 407 LGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDT 466
           LG  DR  +D+++ P+ + S+    +  ++ G  HT+ V+  G L+ +G ++  QLGH  
Sbjct: 61  LGLGDR--NDRLV-PQKVSSVDGDKMVMVACGWRHTISVSSLGGLYTYGWSKYGQLGHGD 117

Query: 467 LRGCLEP 473
               L P
Sbjct: 118 FEDRLVP 124


>gi|354584103|ref|ZP_09003000.1| Listeria/Bacterioides repeat-containing protein [Paenibacillus
           lactis 154]
 gi|353197365|gb|EHB62858.1| Listeria/Bacterioides repeat-containing protein [Paenibacillus
           lactis 154]
          Length = 1286

 Score =  123 bits (308), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 110/362 (30%), Positives = 167/362 (46%), Gaps = 22/362 (6%)

Query: 115 QITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
           ++  G YHT  L+S+  V+S G    G LG+G   T     T +      HV+ V     
Sbjct: 37  KLVAGYYHTASLVSSGEVYSWGYGDRGQLGNG---TWSARTTPVMAKGLNHVIDVHTGVR 93

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF-LT 232
               +   G V+T G N +   G   T   +  P  V  L G+  K V+ GL +    L+
Sbjct: 94  STMALRSDGTVWTWGSNENGQLG-IGTVTDMNVPGQVSGLSGI--KAVSGGLGYHSMALS 150

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
             G V T G N +G+LG+G TL + TP  +A L +V     IAAG  + LA+  +G V++
Sbjct: 151 EDGSVWTWGKNDNGELGNGTTLQQNTPVQVAGLNDV---TAIAAGGYFSLALKSDGTVWA 207

Query: 293 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 352
           +G   +  LG G   D   P  +         V+ ++AG  H +A+   G V+ WGK   
Sbjct: 208 WGVNGDGELGDGTTTDRYVPVQVAGL----TDVMAIAAGGSHSLAVTQDGTVWAWGKNTY 263

Query: 353 GALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDR 412
           G LG G   ++T P  + +L+ H+ V V      +  L  TG+V+ +G      LG    
Sbjct: 264 GTLGDGTRTNRTRPVQIKNLQ-HI-VAVAGGGYHSLALDRTGNVWSWGDNSQRQLGV--- 318

Query: 413 GVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLE 472
           G +   L P  +  +   HV +I+ G +H+V +   G ++G+G N   QLG  T      
Sbjct: 319 GSNASSLIPVPVSGI--EHVREIAAGGFHSVAMKKDGTVWGWGFNGGGQLGDGTSSTRDT 376

Query: 473 PT 474
           PT
Sbjct: 377 PT 378



 Score = 95.5 bits (236), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 83/304 (27%), Positives = 140/304 (46%), Gaps = 18/304 (5%)

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
           H A ++ SG+V++ G       G+  T      P + + L  V    V  G+  T  L  
Sbjct: 44  HTASLVSSGEVYSWGYGDRGQLGN-GTWSARTTPVMAKGLNHV--IDVHTGVRSTMALRS 100

Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY-MLAVTGNGVVYS 292
            G V T GSN +GQLG G   D   P  ++ L  + +V   + G  Y  +A++ +G V++
Sbjct: 101 DGTVWTWGSNENGQLGIGTVTDMNVPGQVSGLSGIKAV---SGGLGYHSMALSEDGSVWT 157

Query: 293 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 352
           +G   N  LG+G    +  P  +         V  ++AG    +AL S G V+ WG    
Sbjct: 158 WGKNDNGELGNGTTLQQNTPVQVAGLN----DVTAIAAGGYFSLALKSDGTVWAWGVNGD 213

Query: 353 GALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDR 412
           G LG G   D+ +P  ++ L   +A+   A    +  +   G+V+ +G   +G+LG    
Sbjct: 214 GELGDGTTTDRYVPVQVAGLTDVMAI--AAGGSHSLAVTQDGTVWAWGKNTYGTLG---D 268

Query: 413 GVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLE 472
           G      RP  + +L+  H+  ++ G YH++ +   G ++ +GDN + QLG  +    L 
Sbjct: 269 GTRTNRTRPVQIKNLQ--HIVAVAGGGYHSLALDRTGNVWSWGDNSQRQLGVGSNASSLI 326

Query: 473 PTEI 476
           P  +
Sbjct: 327 PVPV 330


>gi|119578073|gb|EAW57669.1| hCG2006901, isoform CRA_f [Homo sapiens]
          Length = 1319

 Score =  123 bits (308), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 86/281 (30%), Positives = 139/281 (49%), Gaps = 9/281 (3%)

Query: 166  VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 225
            V V++   H   +   G+V++ G+      GH + + P  RPR++E+L+G+    V AG 
Sbjct: 847  VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRS-PCDRPRVIESLRGIEVVDVAAGG 905

Query: 226  NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA--AGPSYMLA 283
              +  +T  G ++T G   +G+LGH D+ D+  PK +  L+    VV IA  +G +  L 
Sbjct: 906  AHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQG-HRVVDIACGSGDAQTLC 964

Query: 284  VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 343
            +T +  V+S+G G    LG G       P  I +    G+ VV+V  G +  VAL  SG 
Sbjct: 965  LTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL--TGLGVVKVECGSQFSVALTKSGA 1022

Query: 344  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 403
            VYTWGKG    LGHG +     P  +  L+    + +           + G VY +G   
Sbjct: 1023 VYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDND 1082

Query: 404  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV 444
             G LG    G ++ + RPR++ +L+   V++++ G  HT+ 
Sbjct: 1083 EGQLG---DGTTNAIQRPRLVAALQGKKVNRVACGSAHTLA 1120



 Score =  122 bits (305), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 82/269 (30%), Positives = 131/269 (48%), Gaps = 6/269 (2%)

Query: 207  PRLVEALKGVPCKQV--TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP 264
            P L+E+++ V  K+V   +G      L+  G V++ G    G+LGHG+      P+ I  
Sbjct: 833  PTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIES 892

Query: 265  LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH 324
            L  +  VV +AAG ++   VT  G +Y++G G    LGH +  D+L+P+ ++  +   + 
Sbjct: 893  LRGI-EVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVV 951

Query: 325  VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARK 384
             +   +GD   + L     V++WG G  G LG G      +P  + SL     V+V    
Sbjct: 952  DIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGS 1011

Query: 385  RKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV 444
            + +  L  +G+VY +G   +  LG    G  D V RPR +  L+   V  I+TG  H V 
Sbjct: 1012 QFSVALTKSGAVYTWGKGDYHRLG---HGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 1068

Query: 445  VTDRGRLFGFGDNERAQLGHDTLRGCLEP 473
             T+ G ++ +GDN+  QLG  T      P
Sbjct: 1069 CTEDGEVYTWGDNDEGQLGDGTTNAIQRP 1097



 Score =  102 bits (254), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 84/265 (31%), Positives = 126/265 (47%), Gaps = 12/265 (4%)

Query: 96   FLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFT 155
             L+S++H    ++  A N   + G++   L S   V+S G +  G LGHG   + C    
Sbjct: 835  LLESIQHV--FIKKVAVN---SGGKHCLALSSEGEVYSWGEAEDGKLGHG-NRSPCDRPR 888

Query: 156  RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 215
             I       VV V+A   H+A V  +G ++T G       GH D+   + +P+LVEAL+G
Sbjct: 889  VIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQL-KPKLVEALQG 947

Query: 216  VPCKQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
                 +   +G   T  LT    V + G   +G+LG G +     P  I  L  +G VV+
Sbjct: 948  HRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLG-VVK 1006

Query: 274  IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
            +  G  + +A+T +G VY++G G    LGHG      +PR +Q    +G  V+ ++ G  
Sbjct: 1007 VECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGL--QGKKVIAIATGSL 1064

Query: 334  HVVALDSSGYVYTWGKGYCGALGHG 358
            H V     G VYTWG    G LG G
Sbjct: 1065 HCVCCTEDGEVYTWGDNDEGQLGDG 1089



 Score =  101 bits (252), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 77/247 (31%), Positives = 125/247 (50%), Gaps = 12/247 (4%)

Query: 235 GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
           G ++  G N  GQLG   G  +  PTP +++A L  V    Q+  G   + AVT +G +Y
Sbjct: 757 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPV----QLIGGEQTLFAVTADGKLY 812

Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 351
           + G G+   LG G       P  +++ +   I  V V++G +H +AL S G VY+WG+  
Sbjct: 813 ATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAE 872

Query: 352 CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 411
            G LGHG+      P  + SL+    V V A    +  +   G +Y +G   +G LG  D
Sbjct: 873 DGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD 932

Query: 412 RGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG 469
              S+  L+P+++++L+ H V  I+  +G   T+ +TD   ++ +GD +  +LG     G
Sbjct: 933 ---SEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDG 989

Query: 470 CLEPTEI 476
           C  P +I
Sbjct: 990 CKVPMKI 996



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 60/179 (33%), Positives = 90/179 (50%), Gaps = 14/179 (7%)

Query: 311 QPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLS 370
           +PR I+  + K I    ++ G  H  AL SSG +YTWG G  G LGHGD   +  P+ + 
Sbjct: 5   KPRLIEALKTKRIR--DIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVK 62

Query: 371 SLKSHLAVQVC--ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLR 428
            L  H  +QV   +R  +T  L D G V+ +G   FG LG   RG S+    P+ ++ L 
Sbjct: 63  VLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLG---RGGSEGCNIPQNIERLN 119

Query: 429 AHHVSQISTGLYHTVVVTDRG-----RLFGFGDNERAQLGHDTLRGCLEPTEIFIQEME 482
              V QI  G   ++ +T  G     +++ +GDN+  Q G+ T     +PT   +Q +E
Sbjct: 120 GQGVCQIECGAQFSLALTKSGVVWTWQVYAWGDNDHGQQGNGTTTVNRKPT--LVQGLE 176



 Score = 75.9 bits (185), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 54/158 (34%), Positives = 82/158 (51%), Gaps = 7/158 (4%)

Query: 206 RPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL 265
           +PRL+EALK    + +  G + +  LT  G ++T G   +G+LGHGD   +  PK +  L
Sbjct: 5   KPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVL 64

Query: 266 EEVG-SVVQIAAGP--SYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKG 322
             +G  V+Q+A G   +  LA+T  G+V+S+G G    LG G       P+ I+  R  G
Sbjct: 65  --LGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIE--RLNG 120

Query: 323 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 360
             V ++  G +  +AL  SG V+TW     G   HG +
Sbjct: 121 QGVCQIECGAQFSLALTKSGVVWTWQVYAWGDNDHGQQ 158



 Score = 71.6 bits (174), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 50/192 (26%), Positives = 91/192 (47%), Gaps = 7/192 (3%)

Query: 259 PKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTF 318
           P+ I  L+    +  IA G S+  A+T +G +Y++G G    LGHG+   +L+P+ ++  
Sbjct: 6   PRLIEALK-TKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVL 64

Query: 319 RRKGIHVVRVSAG--DEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHL 376
              G  V++V+ G  D   +AL   G V++WG G  G LG G      +P+ +  L    
Sbjct: 65  L--GHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG 122

Query: 377 AVQVCARKRKTFVLVDTGSVYGFGWMGFGSL--GFPDRGVSDKVLRPRILDSLRAHHVSQ 434
             Q+    + +  L  +G V+ +    +G    G    G +    +P ++  L    +++
Sbjct: 123 VCQIECGAQFSLALTKSGVVWTWQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITR 182

Query: 435 ISTGLYHTVVVT 446
           ++ G  H+V  T
Sbjct: 183 VACGSSHSVAWT 194



 Score = 55.5 bits (132), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 50/167 (29%), Positives = 76/167 (45%), Gaps = 4/167 (2%)

Query: 118  TGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
            +G   TL L  + +V+S G    G LG G  +  C    +I+  +   VV+V      + 
Sbjct: 957  SGDAQTLCLTDDDTVWSWGDGDYGKLGRG-GSDGCKVPMKIDSLTGLGVVKVECGSQFSV 1015

Query: 177  FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
             + +SG V+T G       GH   +  + RPR V+ L+G     +  G       T  G 
Sbjct: 1016 ALTKSGAVYTWGKGDYHRLGHGSDDH-VRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGE 1074

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
            V+T G N  GQLG G T     P+ +A L+    V ++A G ++ LA
Sbjct: 1075 VYTWGDNDEGQLGDGTTNAIQRPRLVAALQG-KKVNRVACGSAHTLA 1120



 Score = 52.4 bits (124), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 36/147 (24%), Positives = 71/147 (48%), Gaps = 5/147 (3%)

Query: 332 DEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 391
           D+  ++   SG +Y WG  + G LG  +     +P P  +L +   VQ+   ++  F + 
Sbjct: 747 DDWTLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVT 806

Query: 392 DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRG 449
             G +Y     G+G+ G    G ++ V  P +L+S++   + +++  +G  H + ++  G
Sbjct: 807 ADGKLYA---TGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 863

Query: 450 RLFGFGDNERAQLGHDTLRGCLEPTEI 476
            ++ +G+ E  +LGH     C  P  I
Sbjct: 864 EVYSWGEAEDGKLGHGNRSPCDRPRVI 890



 Score = 47.4 bits (111), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 52/178 (29%), Positives = 76/178 (42%), Gaps = 11/178 (6%)

Query: 116 ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           I  G  H+  L S+  +++ G    G LGHG  TTQ +    +       V+QV+     
Sbjct: 20  IACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQ-LKPKMVKVLLGHRVIQVACGSRD 78

Query: 175 AA--FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
           A    +   G VF+ GD      G R  +     P+ +E L G    Q+  G  F+  LT
Sbjct: 79  AQTLALTDEGLVFSWGDGDFGKLG-RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALT 137

Query: 233 IRG-----HVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 285
             G      V+  G N HGQ G+G T     P  +  LE    + ++A G S+ +A T
Sbjct: 138 KSGVVWTWQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEG-QKITRVACGSSHSVAWT 194


>gi|357506539|ref|XP_003623558.1| Chromosome condensation regulator-like protein [Medicago
           truncatula]
 gi|355498573|gb|AES79776.1| Chromosome condensation regulator-like protein [Medicago
           truncatula]
          Length = 1108

 Score =  122 bits (307), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 101/351 (28%), Positives = 159/351 (45%), Gaps = 22/351 (6%)

Query: 146 PETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIF 205
           P TT  +    +       V Q+++   H A V + G+VFT G+ S    GH   ++   
Sbjct: 247 PSTTDVLVPKPLESSVVLDVHQIASGVRHMALVTRQGEVFTWGEESGGRLGH-GIDKDFG 305

Query: 206 RPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSI- 262
           RP+LVE L     + V  G N T  ++I   + + G   +  G LGHG  +    PK I 
Sbjct: 306 RPQLVEFLAVTNVESVACGENHTCAVSISDELFSWGDGKYNVGLLGHGTDVSHWVPKRIN 365

Query: 263 APLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKG 322
            PLE +  V+ IA G  +    T NG +++FG G+   LGHG +     P+ +Q     G
Sbjct: 366 GPLEGL-QVISIACGTWHSALATSNGKLFTFGDGTFGVLGHGNRESVAYPKEVQLL--SG 422

Query: 323 IHVVRVSAGDEHVVALD----------SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSL 372
           +  + V+ G  H  A+           SS  ++TWG G    LGHG++     P  +S+L
Sbjct: 423 LKTITVACGVWHTAAIVEVTFQSGSNVSSRKLFTWGDGDKYRLGHGNKETYLQPTCVSTL 482

Query: 373 KSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHV 432
             +   Q+      T  L  +G ++  G   FG LG     +SD  +   + D+L    V
Sbjct: 483 IEYNFHQIACGHTMTIALTTSGHLFTMGGTEFGQLG---NSLSDGKIPILVQDALVGEFV 539

Query: 433 SQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQEMEE 483
            +IS G +H   +T R  L+ +G     +LGH  +     PT   ++ ++E
Sbjct: 540 EEISCGAHHVAALTSRSELYTWGKGANGRLGHGDIDDRKSPT--LVEALKE 588



 Score = 85.9 bits (211), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 94/375 (25%), Positives = 152/375 (40%), Gaps = 34/375 (9%)

Query: 115 QITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR---INFPSAAHVVQVSA 170
           QI +G  H  L++    VF+ G    G LGHG +      F R   + F +  +V  V+ 
Sbjct: 268 QIASGVRHMALVTRQGEVFTWGEESGGRLGHGIDK----DFGRPQLVEFLAVTNVESVAC 323

Query: 171 SENHAAFVLQSGQVFTCGDNSSFC--CGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFT 228
            ENH   V  S ++F+ GD        GH          R+   L+G+    +  G   +
Sbjct: 324 GENHTCAVSISDELFSWGDGKYNVGLLGHGTDVSHWVPKRINGPLEGLQVISIACGTWHS 383

Query: 229 GFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV---- 284
              T  G + T G  T G LGHG+      PK +  L  + ++  +A G  +  A+    
Sbjct: 384 ALATSNGKLFTFGDGTFGVLGHGNRESVAYPKEVQLLSGLKTIT-VACGVWHTAAIVEVT 442

Query: 285 --TGNGV----VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
             +G+ V    ++++G G  + LGHG +   LQP  + T      H  +++ G    +AL
Sbjct: 443 FQSGSNVSSRKLFTWGDGDKYRLGHGNKETYLQPTCVSTLIEYNFH--QIACGHTMTIAL 500

Query: 339 DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYG 398
            +SG+++T G    G LG+     K       +L      ++         L     +Y 
Sbjct: 501 TTSGHLFTMGGTEFGQLGNSLSDGKIPILVQDALVGEFVEEISCGAHHVAALTSRSELYT 560

Query: 399 FGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNE 458
           +G    G LG    G  D    P ++++L+  HV  IS G   T  +     + G     
Sbjct: 561 WGKGANGRLG---HGDIDDRKSPTLVEALKERHVKNISCGSSFTSCICIHKWVSG----- 612

Query: 459 RAQLGHDTLRGCLEP 473
              +   T  GC +P
Sbjct: 613 ---VDQSTCTGCRQP 624



 Score = 72.0 bits (175), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 65/230 (28%), Positives = 104/230 (45%), Gaps = 18/230 (7%)

Query: 114 MQITTGRYHTLL-ISNSSVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSAS 171
           + I  G +H+ L  SN  +F+ G    GVLGHG    + V++ + +   S    + V+  
Sbjct: 374 ISIACGTWHSALATSNGKLFTFGDGTFGVLGHG--NRESVAYPKEVQLLSGLKTITVACG 431

Query: 172 ENHAAFVL----QSG------QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQV 221
             H A ++    QSG      ++FT GD   +  GH +      +P  V  L      Q+
Sbjct: 432 VWHTAAIVEVTFQSGSNVSSRKLFTWGDGDKYRLGHGN-KETYLQPTCVSTLIEYNFHQI 490

Query: 222 TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 281
             G   T  LT  GH+ T G    GQLG+  + D   P  +        V +I+ G  ++
Sbjct: 491 ACGHTMTIALTTSGHLFTMGGTEFGQLGNSLS-DGKIPILVQDALVGEFVEEISCGAHHV 549

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG 331
            A+T    +Y++G G+N  LGHG+  D   P  ++  + +  HV  +S G
Sbjct: 550 AALTSRSELYTWGKGANGRLGHGDIDDRKSPTLVEALKER--HVKNISCG 597



 Score = 58.2 bits (139), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 60/206 (29%), Positives = 85/206 (41%), Gaps = 18/206 (8%)

Query: 277 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVV 336
           G  Y+        V   G+G+ F        D L P+ +++     +H  ++++G  H+ 
Sbjct: 224 GDVYIWGEVWADAVAPDGNGTQF----PSTTDVLVPKPLESSVVLDVH--QIASGVRHMA 277

Query: 337 ALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQ-----VCARKRKTFVLV 391
            +   G V+TWG+   G LGHG  IDK    P   L   LAV       C       V +
Sbjct: 278 LVTRQGEVFTWGEESGGRLGHG--IDKDFGRP--QLVEFLAVTNVESVACGENHTCAVSI 333

Query: 392 -DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGR 450
            D    +G G    G LG     VS  V + RI   L    V  I+ G +H+ + T  G+
Sbjct: 334 SDELFSWGDGKYNVGLLGH-GTDVSHWVPK-RINGPLEGLQVISIACGTWHSALATSNGK 391

Query: 451 LFGFGDNERAQLGHDTLRGCLEPTEI 476
           LF FGD     LGH        P E+
Sbjct: 392 LFTFGDGTFGVLGHGNRESVAYPKEV 417


>gi|414585739|tpg|DAA36310.1| TPA: putative regulator of chromosome condensation (RCC1) family
           protein [Zea mays]
          Length = 1044

 Score =  122 bits (307), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 93/312 (29%), Positives = 151/312 (48%), Gaps = 22/312 (7%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V  ++  E HAA + + G+V++ G+ SS   G++  N  + RP++V++L  +  K V  G
Sbjct: 266 VQSIACGETHAAIITKQGEVYSWGNESSGRIGNQ-VNIKVSRPKVVQSLASLHVKDVAYG 324

Query: 225 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTP---KSIAPLEEVGSVVQIAAGPSYM 281
              T  +T+ G +   G   +  +G  D+  R      K  +PL+ + SVV+IA GP + 
Sbjct: 325 SKHTCAVTVSGELIEWGEGPY--MGQLDSYARNQWFPHKLFSPLDGI-SVVKIACGPWHT 381

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL--- 338
             +T +G +Y++G G+   LGHG+     +P+ +++   KG  V  V+ G  H  A+   
Sbjct: 382 AIITSSGQLYTYGDGTFGVLGHGDTQGTTRPKEVESL--KGSRVKCVACGPWHTAAIVEV 439

Query: 339 -------DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 391
                       ++TWG    G LGH D+  K +P  + SL  +  +QV      T  L 
Sbjct: 440 ISDFKSNSPRSKLFTWGDADRGKLGHADKKMKLIPTCVDSLTDYDFIQVSCGTALTVALS 499

Query: 392 DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRL 451
            TG V+  G    G LG P    +D      +   L++  V  IS+G  H  VVT  G++
Sbjct: 500 VTGVVFTSGSSMHGQLGNPH---ADGKTVSAVEGLLKSEFVRHISSGSSHVAVVTTNGKV 556

Query: 452 FGFGDNERAQLG 463
           F +G  +  QLG
Sbjct: 557 FTWGKGKEGQLG 568



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 80/273 (29%), Positives = 129/273 (47%), Gaps = 25/273 (9%)

Query: 122 HTLLISNSSVFSCGSSLCGVL---GHGPETTQCVSFTRIN-FP-------SAAHVVQVSA 170
           H   ++  S  +C  ++ G L   G GP   Q  S+ R   FP           VV+++ 
Sbjct: 317 HVKDVAYGSKHTCAVTVSGELIEWGEGPYMGQLDSYARNQWFPHKLFSPLDGISVVKIAC 376

Query: 171 SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
              H A +  SGQ++T GD +    GH DT +   RP+ VE+LKG   K V  G   T  
Sbjct: 377 GPWHTAIITSSGQLYTYGDGTFGVLGHGDT-QGTTRPKEVESLKGSRVKCVACGPWHTAA 435

Query: 231 L----------TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 280
           +          + R  + T G    G+LGH D   +  P  +  L +    +Q++ G + 
Sbjct: 436 IVEVISDFKSNSPRSKLFTWGDADRGKLGHADKKMKLIPTCVDSLTDY-DFIQVSCGTAL 494

Query: 281 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 340
            +A++  GVV++ GS  +  LG+    D     A++    K   V  +S+G  HV  + +
Sbjct: 495 TVALSVTGVVFTSGSSMHGQLGN-PHADGKTVSAVEGLL-KSEFVRHISSGSSHVAVVTT 552

Query: 341 SGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
           +G V+TWGKG  G LG GD ++++ P  + +L+
Sbjct: 553 NGKVFTWGKGKEGQLGLGDFLNRSTPTLVDALE 585



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 84/294 (28%), Positives = 136/294 (46%), Gaps = 23/294 (7%)

Query: 184 VFTCGD--NSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCG 241
           VF  GD   S   CG  DT++P+  P LV++   +  + +  G      +T +G V++ G
Sbjct: 234 VFFWGDAFGSILECG--DTSKPL--PMLVDSTNMLDVQSIACGETHAAIITKQGEVYSWG 289

Query: 242 SNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCL 301
           + + G++G+   +    PK +  L  +  V  +A G  +  AVT +G +  +G G    +
Sbjct: 290 NESSGRIGNQVNIKVSRPKVVQSLASL-HVKDVAYGSKHTCAVTVSGELIEWGEGPY--M 346

Query: 302 GHGEQHDELQPRAIQTFRR-KGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 360
           G  + +   Q    + F    GI VV+++ G  H   + SSG +YT+G G  G LGHGD 
Sbjct: 347 GQLDSYARNQWFPHKLFSPLDGISVVKIACGPWHTAIITSSGQLYTYGDGTFGVLGHGDT 406

Query: 361 IDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGS----------VYGFGWMGFGSLGFP 410
              T P+ + SLK      V      T  +V+  S          ++ +G    G LG  
Sbjct: 407 QGTTRPKEVESLKGSRVKCVACGPWHTAAIVEVISDFKSNSPRSKLFTWGDADRGKLGHA 466

Query: 411 DRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 464
           D+ +    L P  +DSL  +   Q+S G   TV ++  G +F  G +   QLG+
Sbjct: 467 DKKMK---LIPTCVDSLTDYDFIQVSCGTALTVALSVTGVVFTSGSSMHGQLGN 517



 Score = 88.2 bits (217), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 92/348 (26%), Positives = 147/348 (42%), Gaps = 32/348 (9%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAA-HVVQVSASEN 173
           I  G  H  +I+    V+S G+   G +G+  +    VS  ++    A+ HV  V+    
Sbjct: 269 IACGETHAAIITKQGEVYSWGNESSGRIGN--QVNIKVSRPKVVQSLASLHVKDVAYGSK 326

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDT--NRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
           H   V  SG++   G+      G  D+      F  +L   L G+   ++  G   T  +
Sbjct: 327 HTCAVTVSGELIEWGEGPYM--GQLDSYARNQWFPHKLFSPLDGISVVKIACGPWHTAII 384

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ-IAAGPSYMLAV------ 284
           T  G ++T G  T G LGHGDT     PK +  L+  GS V+ +A GP +  A+      
Sbjct: 385 TSSGQLYTYGDGTFGVLGHGDTQGTTRPKEVESLK--GSRVKCVACGPWHTAAIVEVISD 442

Query: 285 ----TGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 340
               +    ++++G      LGH ++  +L P  + +        ++VS G    VAL  
Sbjct: 443 FKSNSPRSKLFTWGDADRGKLGHADKKMKLIPTCVDSL--TDYDFIQVSCGTALTVALSV 500

Query: 341 SGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 400
           +G V+T G    G LG+     KT+      LKS     + +      V+   G V+ +G
Sbjct: 501 TGVVFTSGSSMHGQLGNPHADGKTVSAVEGLLKSEFVRHISSGSSHVAVVTTNGKVFTWG 560

Query: 401 WMGFGSLG---FPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVV 445
               G LG   F +R        P ++D+L   HV  +S G  +T  V
Sbjct: 561 KGKEGQLGLGDFLNRST------PTLVDALEGRHVESLSCGYNYTAAV 602



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 67/236 (28%), Positives = 112/236 (47%), Gaps = 20/236 (8%)

Query: 251 GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDEL 310
           GDT  +P P  +     +  V  IA G ++   +T  G VYS+G+ S+  +G+       
Sbjct: 248 GDT-SKPLPMLVDSTNML-DVQSIACGETHAAIITKQGEVYSWGNESSGRIGNQVNIKVS 305

Query: 311 QPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKG-YCGALGHGDEIDKTLPEPL 369
           +P+ +Q+     +HV  V+ G +H  A+  SG +  WG+G Y G L      ++  P  L
Sbjct: 306 RPKVVQSL--ASLHVKDVAYGSKHTCAVTVSGELIEWGEGPYMGQLDSYAR-NQWFPHKL 362

Query: 370 -SSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLR 428
            S L     V++      T ++  +G +Y +G   FG LG  D   +    RP+ ++SL+
Sbjct: 363 FSPLDGISVVKIACGPWHTAIITSSGQLYTYGDGTFGVLGHGD---TQGTTRPKEVESLK 419

Query: 429 AHHVSQISTGLYHTVVVTD----------RGRLFGFGDNERAQLGHDTLRGCLEPT 474
              V  ++ G +HT  + +          R +LF +GD +R +LGH   +  L PT
Sbjct: 420 GSRVKCVACGPWHTAAIVEVISDFKSNSPRSKLFTWGDADRGKLGHADKKMKLIPT 475



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 38/154 (24%), Positives = 70/154 (45%), Gaps = 2/154 (1%)

Query: 323 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCA 382
           + V  ++ G+ H   +   G VY+WG    G +G+   I  + P+ + SL S     V  
Sbjct: 264 LDVQSIACGETHAAIITKQGEVYSWGNESSGRIGNQVNIKVSRPKVVQSLASLHVKDVAY 323

Query: 383 RKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHT 442
             + T  +  +G +  +G   +  +G  D    ++    ++   L    V +I+ G +HT
Sbjct: 324 GSKHTCAVTVSGELIEWGEGPY--MGQLDSYARNQWFPHKLFSPLDGISVVKIACGPWHT 381

Query: 443 VVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 476
            ++T  G+L+ +GD     LGH   +G   P E+
Sbjct: 382 AIITSSGQLYTYGDGTFGVLGHGDTQGTTRPKEV 415


>gi|348542108|ref|XP_003458528.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Oreochromis
            niloticus]
          Length = 4936

 Score =  122 bits (307), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 101/337 (29%), Positives = 163/337 (48%), Gaps = 13/337 (3%)

Query: 115  QITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQV---SA 170
            Q+  G+  T +I  N +V +CG    G LG G      V  T I+      V Q+     
Sbjct: 4106 QVVCGQNCTFVIQPNGTVLACGEGSYGRLGQGNSDDLHV-LTVISALQGFVVTQLVTSCG 4164

Query: 171  SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
            S+ H+  + +SG+VF+ GD      GH +++R   RPR +EAL+G    Q++ G   +  
Sbjct: 4165 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQMSCGFKHSAV 4223

Query: 231  LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG-V 289
            +T  G + T G+  +G+LG G+T ++  P+ +  LE    V Q+A G ++ L V+ +G +
Sbjct: 4224 VTADGKLFTFGNGDYGRLGLGNTSNKKLPEKVTALEGY-HVGQVACGLNHTLVVSADGMM 4282

Query: 290  VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 349
            V++FG G    LG G    +  P+ +      GI + +V+ G +  VAL   G V+T+G+
Sbjct: 4283 VWAFGDGDYGKLGLGNSTAKSSPQKVDVL--CGIGIKKVACGTQFSVALTKDGKVFTFGQ 4340

Query: 350  GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGF 409
                 L  G   +   P+ +  L       V      T VL  TG VY +G    G LG 
Sbjct: 4341 DRLIGLPEGRARNHNRPQQVPGLSGIHIQDVAVGAEHTLVLSSTGDVYTWGSNSEGQLGL 4400

Query: 410  PDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT 446
               G ++ V  P ++ +L+  ++ QIS G  H+   T
Sbjct: 4401 ---GHTNHVREPTLVTTLQGKNIHQISAGRCHSAAWT 4434



 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 91/303 (30%), Positives = 141/303 (46%), Gaps = 26/303 (8%)

Query: 173 NHAAFVLQS-GQVFTCGDNSSFCCGHRDTN------RPIFRPRLVEALKGVPCKQVTAGL 225
            +  FV+ S G V  CG  S    G  D+N      +  F P    A+K V   + + G 
Sbjct: 419 QYCTFVISSDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPH--RAIKKVSSSKGSDG- 475

Query: 226 NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 285
             T   T  G V + G   +G+LGHG++  +  PK I    +   VV ++AG  +  AV+
Sbjct: 476 -HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVS 534

Query: 286 GNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY-V 344
            +G +Y++G G    LGHG+ +     R I T  +   +V  VS G  H +AL   G  V
Sbjct: 535 EDGELYTWGEGDFGRLGHGDSNS----RNIPTLVKDISNVGEVSCGSSHTIALSKDGRTV 590

Query: 345 YTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG---W 401
           +++G G  G LGHGD      P+ + +L+     +VCA  + +  L  TG VY +G    
Sbjct: 591 WSFGGGDNGKLGHGDTNRVYKPKVVEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGAC 650

Query: 402 MGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQ 461
           +G GS            LRP++++ L    V  IS G  H + ++    ++ +G+N   Q
Sbjct: 651 LGCGS-------SEATALRPKLIEELATTRVVDISIGDSHCLALSHDNEVYAWGNNSMGQ 703

Query: 462 LGH 464
            G 
Sbjct: 704 CGQ 706



 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 86/319 (26%), Positives = 148/319 (46%), Gaps = 11/319 (3%)

Query: 160  PSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCK 219
            PS +   QV   +N    +  +G V  CG+ S    G  +++  +    ++ AL+G    
Sbjct: 4099 PSFSQAQQVVCGQNCTFVIQPNGTVLACGEGSYGRLGQGNSDD-LHVLTVISALQGFVVT 4157

Query: 220  QVTAGLNFTGF---LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA 276
            Q+       G    LT  G V + G   +G+LGHG++  +  P+ I  L+    VVQ++ 
Sbjct: 4158 QLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQG-EEVVQMSC 4216

Query: 277  GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVV 336
            G  +   VT +G +++FG+G    LG G   ++  P  +     +G HV +V+ G  H +
Sbjct: 4217 GFKHSAVVTADGKLFTFGNGDYGRLGLGNTSNKKLPEKVTAL--EGYHVGQVACGLNHTL 4274

Query: 337  ALDSSGY-VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGS 395
             + + G  V+ +G G  G LG G+   K+ P+ +  L      +V    + +  L   G 
Sbjct: 4275 VVSADGMMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGK 4334

Query: 396  VYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFG 455
            V+ FG      +G P+ G +    RP+ +  L   H+  ++ G  HT+V++  G ++ +G
Sbjct: 4335 VFTFGQDRL--IGLPE-GRARNHNRPQQVPGLSGIHIQDVAVGAEHTLVLSSTGDVYTWG 4391

Query: 456  DNERAQLGHDTLRGCLEPT 474
             N   QLG        EPT
Sbjct: 4392 SNSEGQLGLGHTNHVREPT 4410



 Score = 91.3 bits (225), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 73/230 (31%), Positives = 110/230 (47%), Gaps = 11/230 (4%)

Query: 237  VHTCGSNTHGQLGH-GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 295
            V   G+  HGQL   G  +  PT   IAP        Q+  G +    +  NG V + G 
Sbjct: 4074 VFLWGAGRHGQLAEAGRNILVPT---IAP--SFSQAQQVVCGQNCTFVIQPNGTVLACGE 4128

Query: 296  GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG-DEHVVALDSSGYVYTWGKGYCGA 354
            GS   LG G   D      I   +   +  +  S G D H +AL  SG V++WG G  G 
Sbjct: 4129 GSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGK 4188

Query: 355  LGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGV 414
            LGHG+   +  P  + +L+    VQ+    + + V+   G ++ FG   +G LG  +   
Sbjct: 4189 LGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTADGKLFTFGNGDYGRLGLGN--T 4246

Query: 415  SDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRL-FGFGDNERAQLG 463
            S+K L P  + +L  +HV Q++ GL HT+VV+  G + + FGD +  +LG
Sbjct: 4247 SNKKL-PEKVTALEGYHVGQVACGLNHTLVVSADGMMVWAFGDGDYGKLG 4295



 Score = 47.0 bits (110), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 40/143 (27%), Positives = 66/143 (46%), Gaps = 9/143 (6%)

Query: 344  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 403
            V+ WG G  G L    E  + +  P  +     A QV   +  TFV+   G+V   G   
Sbjct: 4074 VFLWGAGRHGQLA---EAGRNILVPTIAPSFSQAQQVVCGQNCTFVIQPNGTVLACGEGS 4130

Query: 404  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLY---HTVVVTDRGRLFGFGDNERA 460
            +G LG   +G SD +    ++ +L+   V+Q+ T      H++ +T+ G +F +GD +  
Sbjct: 4131 YGRLG---QGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYG 4187

Query: 461  QLGHDTLRGCLEPTEIFIQEMEE 483
            +LGH        P +I   + EE
Sbjct: 4188 KLGHGNSDRQRRPRQIEALQGEE 4210



 Score = 46.6 bits (109), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 29/100 (29%), Positives = 47/100 (47%), Gaps = 2/100 (2%)

Query: 125 LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQV 184
           L S   V++ G   C  LG G      +    I   +   VV +S  ++H   +    +V
Sbjct: 636 LTSTGQVYAWGCGAC--LGCGSSEATALRPKLIEELATTRVVDISIGDSHCLALSHDNEV 693

Query: 185 FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           +  G+NS   CG  ++  PI +P+ V  L GV  +Q++AG
Sbjct: 694 YAWGNNSMGQCGQGNSTGPITKPKKVIGLDGVAIQQISAG 733


>gi|443704116|gb|ELU01328.1| hypothetical protein CAPTEDRAFT_228560 [Capitella teleta]
          Length = 1874

 Score =  122 bits (307), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 97/334 (29%), Positives = 159/334 (47%), Gaps = 14/334 (4%)

Query: 115  QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSAS-- 171
            QI  G+  T +I +N +V +CG    G LG G  +    S T ++      V Q+  S  
Sbjct: 1025 QIICGQNCTFVIQANGTVLACGEGSYGRLGQG-NSDDLHSLTIVSALQGFVVTQLVTSVG 1083

Query: 172  -ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
             + H+  + +SG+VF+ GD      GH +++R   RPR +EAL+G    Q+  G   +  
Sbjct: 1084 SDGHSLALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVIQIACGFKHSAV 1142

Query: 231  LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG-V 289
            +T+ G + T G+  +G+LG G   +R TP+ +  LE    +  +A G ++ + V+ +G  
Sbjct: 1143 VTVDGKLLTFGNGDYGRLGLGTVCNRKTPERVKALENY-HIGHVACGLNHTVCVSADGST 1201

Query: 290  VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 349
             ++FG G    LG G    +  P  I+     G+ V +V+ G +  VAL   G+V TWG+
Sbjct: 1202 TWAFGDGDYGKLGLGNTSAKSTPVKIEAL--SGLKVKKVACGTQFSVALTRDGFVLTWGQ 1259

Query: 350  GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGF 409
                            P+ +++L  H   +V      T  L   G+V+G+G    G LG 
Sbjct: 1260 DRLIGQTEAQMRGHCTPQKVTTLAGHFIEEVVVGSEHTLALTSDGNVWGWGLNADGQLGL 1319

Query: 410  PDRGVSDKVLRPRILDSL-RAHHVSQISTGLYHT 442
               G +  V  P++L  L  +  + QIS G  H+
Sbjct: 1320 ---GHTGTVREPQLLGGLGSSEPIKQISAGRTHS 1350



 Score = 89.4 bits (220), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 85/321 (26%), Positives = 147/321 (45%), Gaps = 25/321 (7%)

Query: 154  FTRINFPSAAHVVQVSASENHAAFVLQS-GQVFTCGDNSSFCCGHRDTNRPIFRPRLVEA 212
             T ++  S +   Q+   +N   FV+Q+ G V  CG+ S    G  +++  +    +V A
Sbjct: 1012 LTPLHTSSFSSAQQIICGQN-CTFVIQANGTVLACGEGSYGRLGQGNSDD-LHSLTIVSA 1069

Query: 213  LKGVPCKQVTAGLNFTGF---LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG 269
            L+G    Q+   +   G    LT  G V + G   +G+LGHG++  +  P+ I  L+   
Sbjct: 1070 LQGFVVTQLVTSVGSDGHSLALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQG-E 1128

Query: 270  SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS 329
             V+QIA G  +   VT +G + +FG+G    LG G   +   P  ++    +  H+  V+
Sbjct: 1129 EVIQIACGFKHSAVVTVDGKLLTFGNGDYGRLGLGTVCNRKTPERVKAL--ENYHIGHVA 1186

Query: 330  AGDEHVVALDSSG-YVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTF 388
             G  H V + + G   + +G G  G LG G+   K+ P  + +L      +V    + + 
Sbjct: 1187 CGLNHTVCVSADGSTTWAFGDGDYGKLGLGNTSAKSTPVKIEALSGLKVKKVACGTQFSV 1246

Query: 389  VLVDTGSVYGFGWMGFGSLGFPDR--GVSDKVLR----PRILDSLRAHHVSQISTGLYHT 442
             L   G V  +G          DR  G ++  +R    P+ + +L  H + ++  G  HT
Sbjct: 1247 ALTRDGFVLTWG---------QDRLIGQTEAQMRGHCTPQKVTTLAGHFIEEVVVGSEHT 1297

Query: 443  VVVTDRGRLFGFGDNERAQLG 463
            + +T  G ++G+G N   QLG
Sbjct: 1298 LALTSDGNVWGWGLNADGQLG 1318



 Score = 62.8 bits (151), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 45/159 (28%), Positives = 78/159 (49%), Gaps = 8/159 (5%)

Query: 327  RVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCAR--- 383
            ++  G      + ++G V   G+G  G LG G+  D      +S+L+  +  Q+      
Sbjct: 1025 QIICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHSLTIVSALQGFVVTQLVTSVGS 1084

Query: 384  KRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV 443
               +  L ++G V+ +G   +G LG    G SD+  RPR +++L+   V QI+ G  H+ 
Sbjct: 1085 DGHSLALTESGEVFSWGDGDYGKLG---HGNSDRQRRPRQIEALQGEEVIQIACGFKHSA 1141

Query: 444  VVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQEME 482
            VVT  G+L  FG+ +  +LG  T+  C   T   ++ +E
Sbjct: 1142 VVTVDGKLLTFGNGDYGRLGLGTV--CNRKTPERVKALE 1178



 Score = 49.7 bits (117), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 42/147 (28%), Positives = 70/147 (47%), Gaps = 9/147 (6%)

Query: 345  YTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGF 404
            Y WG G  G L    E  +++  PL +     A Q+   +  TFV+   G+V   G   +
Sbjct: 994  YLWGGGRHGQLC---EAGRSVLTPLHTSSFSSAQQIICGQNCTFVIQANGTVLACGEGSY 1050

Query: 405  GSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLY---HTVVVTDRGRLFGFGDNERAQ 461
            G LG   +G SD +    I+ +L+   V+Q+ T +    H++ +T+ G +F +GD +  +
Sbjct: 1051 GRLG---QGNSDDLHSLTIVSALQGFVVTQLVTSVGSDGHSLALTESGEVFSWGDGDYGK 1107

Query: 462  LGHDTLRGCLEPTEIFIQEMEEDTGLA 488
            LGH        P +I   + EE   +A
Sbjct: 1108 LGHGNSDRQRRPRQIEALQGEEVIQIA 1134



 Score = 39.7 bits (91), Expect = 3.4,   Method: Compositional matrix adjust.
 Identities = 48/178 (26%), Positives = 72/178 (40%), Gaps = 14/178 (7%)

Query: 116  ITTGRYHTLLIS--NSSVFSCGSSLCGVLGHGPETTQCV-----SFTRINFPSAAHVVQV 168
            +  G  HT+ +S   S+ ++ G    G LG G  + +       + + +     A   Q 
Sbjct: 1185 VACGLNHTVCVSADGSTTWAFGDGDYGKLGLGNTSAKSTPVKIEALSGLKVKKVACGTQF 1244

Query: 169  SASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFT 228
            S +     FVL  GQ    G   +   GH         P+ V  L G   ++V  G   T
Sbjct: 1245 SVALTRDGFVLTWGQDRLIGQTEAQMRGH-------CTPQKVTTLAGHFIEEVVVGSEHT 1297

Query: 229  GFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTG 286
              LT  G+V   G N  GQLG G T     P+ +  L     + QI+AG ++  A +G
Sbjct: 1298 LALTSDGNVWGWGLNADGQLGLGHTGTVREPQLLGGLGSSEPIKQISAGRTHSAAWSG 1355


>gi|195441394|ref|XP_002068495.1| GK20388 [Drosophila willistoni]
 gi|194164580|gb|EDW79481.1| GK20388 [Drosophila willistoni]
          Length = 1054

 Score =  122 bits (307), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 109/356 (30%), Positives = 168/356 (47%), Gaps = 21/356 (5%)

Query: 131 VFSCGSSLCGVLGHG-PETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGD 189
           +F  G++  G LG G  E  Q +  ++I +   A + Q++    H  F+  +G+V+ CG+
Sbjct: 3   LFCWGNASHGQLGMGGIEDEQILIPSQIPWKPDAPLRQIACGHRHTLFLTANGKVYACGN 62

Query: 190 NSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLG 249
           N     GH   N P  RP L+  L+      +  G   +  LT  G V + G N  GQLG
Sbjct: 63  NDQAQLGH---NLPTKRPLLIPELQNYVVVAIACGSRHSMALTEWGQVLSWGDNDCGQLG 119

Query: 250 HG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHD 308
              D      PK I  L     VVQIA G ++ LA+T  G +YS+GS     LG  +   
Sbjct: 120 QSTDQSIIELPKIIRSLVS-KHVVQIACGNNHSLALTSCGELYSWGSNIYGQLG-VKPPQ 177

Query: 309 ELQ----PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKT 364
           EL     P  + T    GI +  ++ G  H   +  S  V+ +G+  CG LG  DE ++ 
Sbjct: 178 ELSHCNYPLRLTTLL--GIPLATIACGGNHSFLISKSSAVFGFGRNNCGQLGLNDESNRA 235

Query: 365 LPEPLSSLKSHLAVQ--VCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPR 422
            P  L +L++ L V+   C  +   F L + G V+  G   +G LG    G +   + PR
Sbjct: 236 YPTQLKTLRT-LGVRFVACGDEFSVF-LTNEGGVFTCGAGTYGQLG---HGSNTNEMLPR 290

Query: 423 ILDSLRAHHVSQISTGLYHTV-VVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF 477
           ++  L    ++Q++ G  HT+ +V  RGR++GFG     QLG+ +      P E+ 
Sbjct: 291 MVMELMGSTITQVACGNRHTLALVPSRGRVYGFGLGSSGQLGNRSTNSVTLPQEVL 346



 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 92/304 (30%), Positives = 137/304 (45%), Gaps = 21/304 (6%)

Query: 115 QITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
           QI  G  HTL L +N  V++CG++    LGH   T + +    +       VV ++    
Sbjct: 40  QIACGHRHTLFLTANGKVYACGNNDQAQLGHNLPTKRPLLIPEL---QNYVVVAIACGSR 96

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
           H+  + + GQV + GDN     G       I  P+++ +L      Q+  G N +  LT 
Sbjct: 97  HSMALTEWGQVLSWGDNDCGQLGQSTDQSIIELPKIIRSLVSKHVVQIACGNNHSLALTS 156

Query: 234 RGHVHTCGSNTHGQLG--------HGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 285
            G +++ GSN +GQLG        H +   R T     PL        IA G ++   ++
Sbjct: 157 CGELYSWGSNIYGQLGVKPPQELSHCNYPLRLTTLLGIPL------ATIACGGNHSFLIS 210

Query: 286 GNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVY 345
            +  V+ FG  +   LG  ++ +   P  ++T R  G+    V+ GDE  V L + G V+
Sbjct: 211 KSSAVFGFGRNNCGQLGLNDESNRAYPTQLKTLRTLGVRF--VACGDEFSVFLTNEGGVF 268

Query: 346 TWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDT-GSVYGFGWMGF 404
           T G G  G LGHG   ++ LP  +  L      QV    R T  LV + G VYGFG    
Sbjct: 269 TCGAGTYGQLGHGSNTNEMLPRMVMELMGSTITQVACGNRHTLALVPSRGRVYGFGLGSS 328

Query: 405 GSLG 408
           G LG
Sbjct: 329 GQLG 332



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 49/150 (32%), Positives = 69/150 (46%), Gaps = 6/150 (4%)

Query: 116 ITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           I  G  H+ LIS SS VF  G + CG LG   E+ +    T++       V  V+  +  
Sbjct: 199 IACGGNHSFLISKSSAVFGFGRNNCGQLGLNDESNRAYP-TQLKTLRTLGVRFVACGDEF 257

Query: 175 AAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVPCKQVTAGLNFT-GFLT 232
           + F+   G VFTCG  +    GH  +TN  +  PR+V  L G    QV  G   T   + 
Sbjct: 258 SVFLTNEGGVFTCGAGTYGQLGHGSNTNEML--PRMVMELMGSTITQVACGNRHTLALVP 315

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSI 262
            RG V+  G  + GQLG+  T     P+ +
Sbjct: 316 SRGRVYGFGLGSSGQLGNRSTNSVTLPQEV 345


>gi|344239412|gb|EGV95515.1| putative E3 ubiquitin-protein ligase HERC2 [Cricetulus griseus]
          Length = 958

 Score =  122 bits (307), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 85/280 (30%), Positives = 139/280 (49%), Gaps = 9/280 (3%)

Query: 166 VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 225
           V V++   H   +   G+V++ G+      GH + + P  RPR++E+L+G+    V AG 
Sbjct: 313 VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRS-PCDRPRVIESLRGIEVVDVAAGG 371

Query: 226 NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA--AGPSYMLA 283
             +  +T  G ++T G   +G+LGH D+ D+  PK +  L+    V+ IA  +G +  L 
Sbjct: 372 AHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQG-HRVIDIACGSGDAQTLC 430

Query: 284 VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 343
           +T +  V+S+G G    LG G       P  I +    G+ VV+V  G +  VAL  SG 
Sbjct: 431 LTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL--TGLGVVKVECGSQFSVALTKSGA 488

Query: 344 VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 403
           VYTWGKG    LGHG +     P  +  L+    + +           + G VY +G   
Sbjct: 489 VYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDND 548

Query: 404 FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV 443
            G LG    G ++ + RPR++ +L+   V++++ G  HT+
Sbjct: 549 EGQLG---DGTTNAIQRPRLVAALQGKKVNRVACGSAHTL 585



 Score =  122 bits (305), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 82/269 (30%), Positives = 131/269 (48%), Gaps = 6/269 (2%)

Query: 207 PRLVEALKGVPCKQV--TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP 264
           P L+E+++ V  K+V   +G      L+  G V++ G    G+LGHG+      P+ I  
Sbjct: 299 PTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIES 358

Query: 265 LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH 324
           L  +  VV +AAG ++   VT  G +Y++G G    LGH +  D+L+P+ ++  +   + 
Sbjct: 359 LRGI-EVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVI 417

Query: 325 VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARK 384
            +   +GD   + L     V++WG G  G LG G      +P  + SL     V+V    
Sbjct: 418 DIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGS 477

Query: 385 RKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV 444
           + +  L  +G+VY +G   +  LG    G  D V RPR +  L+   V  I+TG  H V 
Sbjct: 478 QFSVALTKSGAVYTWGKGDYHRLG---HGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 534

Query: 445 VTDRGRLFGFGDNERAQLGHDTLRGCLEP 473
            T+ G ++ +GDN+  QLG  T      P
Sbjct: 535 CTEDGEVYTWGDNDEGQLGDGTTNAIQRP 563



 Score =  102 bits (254), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 86/280 (30%), Positives = 132/280 (47%), Gaps = 12/280 (4%)

Query: 96  FLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFT 155
            L+S++H    ++  A N   + G++   L S   V+S G +  G LGHG   + C    
Sbjct: 301 LLESIQHV--FIKKVAVN---SGGKHCLALSSEGEVYSWGEAEDGKLGHG-NRSPCDRPR 354

Query: 156 RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 215
            I       VV V+A   H+A V  +G ++T G       GH D+   + +P+LVEAL+G
Sbjct: 355 VIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQL-KPKLVEALQG 413

Query: 216 VPCKQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
                +   +G   T  LT    V + G   +G+LG G +     P  I  L  +G VV+
Sbjct: 414 HRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLG-VVK 472

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           +  G  + +A+T +G VY++G G    LGHG      +PR +Q    +G  V+ ++ G  
Sbjct: 473 VECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGL--QGKKVIAIATGSL 530

Query: 334 HVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
           H V     G VYTWG    G LG G       P  +++L+
Sbjct: 531 HCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQ 570



 Score =  101 bits (252), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 77/247 (31%), Positives = 125/247 (50%), Gaps = 12/247 (4%)

Query: 235 GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
           G ++  G N  GQLG   G  +  PTP +++A L  V    Q+  G   + AVT +G +Y
Sbjct: 223 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPV----QLIGGEQTLFAVTADGKLY 278

Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 351
           + G G+   LG G       P  +++ +   I  V V++G +H +AL S G VY+WG+  
Sbjct: 279 ATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAE 338

Query: 352 CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 411
            G LGHG+      P  + SL+    V V A    +  +   G +Y +G   +G LG  D
Sbjct: 339 DGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD 398

Query: 412 RGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG 469
              S+  L+P+++++L+ H V  I+  +G   T+ +TD   ++ +GD +  +LG     G
Sbjct: 399 ---SEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDG 455

Query: 470 CLEPTEI 476
           C  P +I
Sbjct: 456 CKVPMKI 462



 Score = 55.5 bits (132), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 50/167 (29%), Positives = 77/167 (46%), Gaps = 4/167 (2%)

Query: 118 TGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
           +G   TL L  + +V+S G    G LG G  +  C    +I+  +   VV+V      + 
Sbjct: 423 SGDAQTLCLTDDDTVWSWGDGDYGKLGRG-GSDGCKVPMKIDSLTGLGVVKVECGSQFSV 481

Query: 177 FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
            + +SG V+T G       GH  ++  + RPR V+ L+G     +  G       T  G 
Sbjct: 482 ALTKSGAVYTWGKGDYHRLGH-GSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGE 540

Query: 237 VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
           V+T G N  GQLG G T     P+ +A L+    V ++A G ++ LA
Sbjct: 541 VYTWGDNDEGQLGDGTTNAIQRPRLVAALQG-KKVNRVACGSAHTLA 586



 Score = 52.4 bits (124), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 36/147 (24%), Positives = 71/147 (48%), Gaps = 5/147 (3%)

Query: 332 DEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 391
           D+  ++   SG +Y WG  + G LG  +     +P P  +L +   VQ+   ++  F + 
Sbjct: 213 DDWTLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVT 272

Query: 392 DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRG 449
             G +Y     G+G+ G    G ++ V  P +L+S++   + +++  +G  H + ++  G
Sbjct: 273 ADGKLYA---TGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 329

Query: 450 RLFGFGDNERAQLGHDTLRGCLEPTEI 476
            ++ +G+ E  +LGH     C  P  I
Sbjct: 330 EVYSWGEAEDGKLGHGNRSPCDRPRVI 356


>gi|357137056|ref|XP_003570117.1| PREDICTED: uncharacterized protein LOC100825305 isoform 2
           [Brachypodium distachyon]
          Length = 940

 Score =  122 bits (306), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 102/350 (29%), Positives = 153/350 (43%), Gaps = 27/350 (7%)

Query: 131 VFSCGSSLCGVLGHGPETTQCVSFTRI-NFPSAAHVVQVSASENHAAFVLQSGQVFTCGD 189
           +F  G  L  VL     +   VS  R+ N      V  VS  E HAA V + G+VF+ G 
Sbjct: 170 IFVWGDVLGSVLDDRDTSKANVSLPRLLNSTQILDVQNVSCGEKHAAIVTKQGEVFSWGK 229

Query: 190 NSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLG 249
                 GH+  +  +  P+++E+L     K +  G   T  L I G +   G  TH    
Sbjct: 230 EDGGRLGHK-VSVGVLHPKIIESLAFTHVKAIAFGAKHTCALAISGELFEWGEGTHSLGV 288

Query: 250 HGDTLDRPTP---KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ 306
             D   R      K   PLE V SVV++A G  +   ++ +G ++++G G+   LGHG+ 
Sbjct: 289 WDDQCQRSQWYPHKLFGPLEGV-SVVKMACGQWHTAIISSSGQLFTYGDGTFGVLGHGDT 347

Query: 307 HDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL----------DSSGYVYTWGKGYCGALG 356
               +P+ +++   KG+ V  V+ G  H  A+            SG ++TWG    G LG
Sbjct: 348 SSVARPKEVESL--KGLRVKAVACGPWHTAAIVEILGTVKSNAPSGKLFTWGDADRGKLG 405

Query: 357 HGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLG---FPDRG 413
           H D+  K +P  + +L      QV   K  T  L  TG V+  G    G LG     D  
Sbjct: 406 HSDKESKLVPTCVKALTDSDFAQVSCAKALTVALTITGVVFTIGSKEHGQLGSHRLDDSS 465

Query: 414 VSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 463
           +        +   L+   V +IS+G  H  V+T  G++F +G     QLG
Sbjct: 466 ICS------VEGPLKTEFVREISSGSSHVAVLTMNGKVFTWGKGTEGQLG 509



 Score = 94.7 bits (234), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 70/221 (31%), Positives = 111/221 (50%), Gaps = 18/221 (8%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           VV+++  + H A +  SGQ+FT GD +    GH DT+  + RP+ VE+LKG+  K V  G
Sbjct: 312 VVKMACGQWHTAIISSSGQLFTYGDGTFGVLGHGDTS-SVARPKEVESLKGLRVKAVACG 370

Query: 225 LNFTGFL-----TIR-----GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQI 274
              T  +     T++     G + T G    G+LGH D   +  P  +  L +     Q+
Sbjct: 371 PWHTAAIVEILGTVKSNAPSGKLFTWGDADRGKLGHSDKESKLVPTCVKALTD-SDFAQV 429

Query: 275 AAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFR--RKGIHVVRVSAGD 332
           +   +  +A+T  GVV++ GS  +  LG     D     +I +     K   V  +S+G 
Sbjct: 430 SCAKALTVALTITGVVFTIGSKEHGQLGSHRLDDS----SICSVEGPLKTEFVREISSGS 485

Query: 333 EHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
            HV  L  +G V+TWGKG  G LG G+ +D++ P  + +L+
Sbjct: 486 SHVAVLTMNGKVFTWGKGTEGQLGLGNYVDRSSPTLVEALE 526



 Score = 90.1 bits (222), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 83/308 (26%), Positives = 136/308 (44%), Gaps = 17/308 (5%)

Query: 173 NHAAFVLQS-GQVFTCGDNSSFCCGHRDTNRP-IFRPRLVEALKGVPCKQVTAGLNFTGF 230
           +H A+   S   +F  GD        RDT++  +  PRL+ + + +  + V+ G      
Sbjct: 158 SHVAYGTDSLKDIFVWGDVLGSVLDDRDTSKANVSLPRLLNSTQILDVQNVSCGEKHAAI 217

Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 290
           +T +G V + G    G+LGH  ++    PK I  L     V  IA G  +  A+  +G +
Sbjct: 218 VTKQGEVFSWGKEDGGRLGHKVSVGVLHPKIIESLA-FTHVKAIAFGAKHTCALAISGEL 276

Query: 291 YSFGSGSNFCLGHGEQHDELQPRAIQTF-RRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 349
           + +G G++      +Q    Q    + F   +G+ VV+++ G  H   + SSG ++T+G 
Sbjct: 277 FEWGEGTHSLGVWDDQCQRSQWYPHKLFGPLEGVSVVKMACGQWHTAIISSSGQLFTYGD 336

Query: 350 GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVD----------TGSVYGF 399
           G  G LGHGD      P+ + SLK      V      T  +V+          +G ++ +
Sbjct: 337 GTFGVLGHGDTSSVARPKEVESLKGLRVKAVACGPWHTAAIVEILGTVKSNAPSGKLFTW 396

Query: 400 GWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNER 459
           G    G LG  D+   +  L P  + +L     +Q+S     TV +T  G +F  G  E 
Sbjct: 397 GDADRGKLGHSDK---ESKLVPTCVKALTDSDFAQVSCAKALTVALTITGVVFTIGSKEH 453

Query: 460 AQLGHDTL 467
            QLG   L
Sbjct: 454 GQLGSHRL 461



 Score = 82.8 bits (203), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 71/236 (30%), Positives = 108/236 (45%), Gaps = 16/236 (6%)

Query: 114 MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +++  G++HT +IS+S  +F+ G    GVLGHG +T+       +       V  V+   
Sbjct: 313 VKMACGQWHTAIISSSGQLFTYGDGTFGVLGHG-DTSSVARPKEVESLKGLRVKAVACGP 371

Query: 173 NHAAFVLQ----------SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 222
            H A +++          SG++FT GD      GH D    +  P  V+AL      QV+
Sbjct: 372 WHTAAIVEILGTVKSNAPSGKLFTWGDADRGKLGHSDKESKLV-PTCVKALTDSDFAQVS 430

Query: 223 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 282
                T  LTI G V T GS  HGQLG     D        PL +   V +I++G S++ 
Sbjct: 431 CAKALTVALTITGVVFTIGSKEHGQLGSHRLDDSSICSVEGPL-KTEFVREISSGSSHVA 489

Query: 283 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
            +T NG V+++G G+   LG G   D   P  ++    K   V  ++ G    VA+
Sbjct: 490 VLTMNGKVFTWGKGTEGQLGLGNYVDRSSPTLVEALEDK--QVDSIACGSNFTVAV 543



 Score = 78.6 bits (192), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 66/248 (26%), Positives = 110/248 (44%), Gaps = 29/248 (11%)

Query: 251 GDTL-----DRPTPKSIAPLE------EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNF 299
           GD L     DR T K+   L       ++  V  ++ G  +   VT  G V+S+G     
Sbjct: 174 GDVLGSVLDDRDTSKANVSLPRLLNSTQILDVQNVSCGEKHAAIVTKQGEVFSWGKEDGG 233

Query: 300 CLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGD 359
            LGH      L P+ I++      HV  ++ G +H  AL  SG ++ WG+G        D
Sbjct: 234 RLGHKVSVGVLHPKIIESL--AFTHVKAIAFGAKHTCALAISGELFEWGEGTHSLGVWDD 291

Query: 360 EIDKTLPEP---LSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSD 416
           +  ++   P      L+    V++   +  T ++  +G ++ +G   FG LG  D   + 
Sbjct: 292 QCQRSQWYPHKLFGPLEGVSVVKMACGQWHTAIISSSGQLFTYGDGTFGVLGHGD---TS 348

Query: 417 KVLRPRILDSLRAHHVSQISTGLYHTVVVTD----------RGRLFGFGDNERAQLGHDT 466
            V RP+ ++SL+   V  ++ G +HT  + +           G+LF +GD +R +LGH  
Sbjct: 349 SVARPKEVESLKGLRVKAVACGPWHTAAIVEILGTVKSNAPSGKLFTWGDADRGKLGHSD 408

Query: 467 LRGCLEPT 474
               L PT
Sbjct: 409 KESKLVPT 416



 Score = 61.6 bits (148), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 42/155 (27%), Positives = 69/155 (44%), Gaps = 2/155 (1%)

Query: 323 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCA 382
           + V  VS G++H   +   G V++WGK   G LGH   +    P+ + SL       +  
Sbjct: 203 LDVQNVSCGEKHAAIVTKQGEVFSWGKEDGGRLGHKVSVGVLHPKIIESLAFTHVKAIAF 262

Query: 383 RKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRP-RILDSLRAHHVSQISTGLYH 441
             + T  L  +G ++ +G  G  SLG  D         P ++   L    V +++ G +H
Sbjct: 263 GAKHTCALAISGELFEWG-EGTHSLGVWDDQCQRSQWYPHKLFGPLEGVSVVKMACGQWH 321

Query: 442 TVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 476
           T +++  G+LF +GD     LGH        P E+
Sbjct: 322 TAIISSSGQLFTYGDGTFGVLGHGDTSSVARPKEV 356


>gi|428170910|gb|EKX39831.1| hypothetical protein GUITHDRAFT_164838 [Guillardia theta CCMP2712]
          Length = 1983

 Score =  122 bits (306), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 93/287 (32%), Positives = 142/287 (49%), Gaps = 15/287 (5%)

Query: 95  RFLQSVEHSSDIVETSAGN--MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQC 151
           R  +SV+H   I ET A    + I  G+  T  ++++  V++ G S  G LG G      
Sbjct: 536 RSEESVKHPKRI-ETLAKMSVVFIACGKDSTAALTDTGKVYTWGKSAQGKLGLGSGKPLA 594

Query: 152 VSFTRINFPSAAHVV-QVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLV 210
           +   ++    ++HVV Q+S   NHAA      + F  G N+    G    +  +  P  +
Sbjct: 595 IVVPQLVQDLSSHVVCQISLGRNHAACSTDMHKFFVWGSNTFGQLGIPHISSYMPDPYEI 654

Query: 211 EALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGD-----TLDRPTPKSIAPL 265
            +L+    + +  G   T   T  G V +CG   HGQLGHGD      L +  P     +
Sbjct: 655 TSLREANIRSIACGGWHTLISTNTGSVMSCGKGWHGQLGHGDYESLTALSKTLPYFKKIV 714

Query: 266 EEVGS--VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGI 323
           E  G   +V+++AG     A+T  G ++++G G  + LGH    +E  PR ++ F +  I
Sbjct: 715 EGFGDSFIVKVSAGKESSAAITNKGRLFTWGKGDEYQLGHESSKNEAYPREVEFFAK--I 772

Query: 324 HVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK-TLPEPL 369
            VV VS GD H++ALD SG  Y+WG G  G LGHG+  ++ TLP P+
Sbjct: 773 RVVDVSIGDSHMLALDYSGLPYSWGNGSAGQLGHGEMCERETLPRPI 819



 Score =  121 bits (304), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 92/296 (31%), Positives = 143/296 (48%), Gaps = 18/296 (6%)

Query: 179 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVH 238
           LQ   VF  GD  +   G++ +      P +V A + V  K    G   T FL+  G V 
Sbjct: 87  LQGSHVFMWGDGENGKLGNQ-SEEIQHVPYIVPAFRNVLVKVCALGKQHTLFLSADGVVL 145

Query: 239 TCGSNTHGQLGHGD-TLDRPTP-------KSIAPLEEV----GSVVQIAAGPSYMLAVTG 286
           +CGSN +GQLG GD  L R TP       KS+  L+ +     ++V IAAG  + LA+  
Sbjct: 146 SCGSNVYGQLGMGDHMLSRSTPVSEPSKQKSLDKLQAIIQSLNNIVGIAAGYYHSLALND 205

Query: 287 NGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYT 346
            G ++S+GSGS   LG G   +   PR + + +     VV ++ G  H  A+ + G V+T
Sbjct: 206 TGKIFSWGSGSWGKLGIGSDANAESPRFVASLQNS--KVVHIACGAHHTAAITTVGDVWT 263

Query: 347 WGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGS 406
           WGKG  G LGH    ++  P   +SL+   A ++      T V++ +G +Y  G    G 
Sbjct: 264 WGKGLRGQLGHKSVKEEFSPRLNASLRKCGAQKIRCGDDHTLVILRSGQLYSMGANTHGQ 323

Query: 407 LGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQL 462
           LG  D   +D+++ P ++       V  I      ++ +T+ G++F FG+     L
Sbjct: 324 LGLGD--ATDRII-PTLVTGFANEKVIDIDAKGCRSIALTNTGKVFAFGNETEPHL 376



 Score = 89.7 bits (221), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 79/287 (27%), Positives = 127/287 (44%), Gaps = 15/287 (5%)

Query: 182  GQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCG 241
            G VF  G+++    G R   +    P L+++L       ++A  + + F+T  G ++  G
Sbjct: 1610 GCVFVWGEDTCGQLGIRGL-QAARSPSLMQSLLATSIVHISANSDMSAFVTDSGSLYVSG 1668

Query: 242  SNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCL 301
             + HG+LG G     PTP  I  L  V  ++++A G  + LA+T    VY++G G     
Sbjct: 1669 GSEHGRLGLGHMAPAPTPVEIRSLNTV-KIMKVACGTYHCLALTEEKRVYAWGDGKWGNA 1727

Query: 302  GHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGD-E 360
            G    +D L+P+ + +       ++ V AG  H  AL   G ++ WGK   G LG G   
Sbjct: 1728 GVSNTNDVLEPQELSSL--AACSIIGVHAGGFHSAALSQYGDLFMWGKNSNGQLGLGTTS 1785

Query: 361  IDKTLPEPLSSLKSH-LAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLG---FPDRGVSD 416
              +  P  +S+L    + V + A      + V + +++  G    G LG   F DR    
Sbjct: 1786 AAEDSPTKISNLDGVVMDVSLGANHSAVLMQVTSPNLFTCGLNANGQLGLGDFVDRSTLT 1845

Query: 417  KVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 463
             V      D+L    +   S G  HT  V+  G L  +G+    QLG
Sbjct: 1846 AV------DALDDRQIVSASCGAAHTAAVSQYGDLITWGNGRNGQLG 1886



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 100/411 (24%), Positives = 164/411 (39%), Gaps = 67/411 (16%)

Query: 112 GNMQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSA 170
           G  +I  G  HTL+I  S  ++S G++  G LG G  T + +      F +   V+ + A
Sbjct: 293 GAQKIRCGDDHTLVILRSGQLYSMGANTHGQLGLGDATDRIIPTLVTGFANE-KVIDIDA 351

Query: 171 SENHAAFVLQSGQVFTCGDNSS--------FCCGHRDTNRPIFRPRLV----------EA 212
               +  +  +G+VF  G+ +         F  G   ++  I   R            + 
Sbjct: 352 KGCRSIALTNTGKVFAFGNETEPHLNRIPRFVAGLPKSDLIIAVARTAHFDFAISDTGQL 411

Query: 213 LKGVP-CKQVTAGLNFTGFLTIRGHVHT-CGSN------------THGQLGHGDTLDRPT 258
            +  P   +  +      F  I+G V   CG N            T   +    +    +
Sbjct: 412 FRWRPFSSEEESSRMLESFHAIKGVVRMFCGHNHMAVICSPEMGCTQAMISRNKSTSFSS 471

Query: 259 PKSIAPLEEVGS------------------VVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 300
             S A LE+  S                   VQ+   PS      G+G +Y++G G    
Sbjct: 472 DISRASLEKFPSEKILPALGTNTEYLDEFATVQVRDSPSR----EGDGYIYTYGKGVFGR 527

Query: 301 LGHGEQHDELQ-----PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG-- 353
           LGHG ++   +     P+ I+T  +  + VV ++ G +   AL  +G VYTWGK   G  
Sbjct: 528 LGHGVEYTRSEESVKHPKRIETLAK--MSVVFIACGKDSTAALTDTGKVYTWGKSAQGKL 585

Query: 354 ALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRG 413
            LG G  +   +P+ +  L SH+  Q+   +       D    + +G   FG LG P   
Sbjct: 586 GLGSGKPLAIVVPQLVQDLSSHVVCQISLGRNHAACSTDMHKFFVWGSNTFGQLGIPH-- 643

Query: 414 VSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 464
           +S  +  P  + SLR  ++  I+ G +HT++ T+ G +   G     QLGH
Sbjct: 644 ISSYMPDPYEITSLREANIRSIACGGWHTLISTNTGSVMSCGKGWHGQLGH 694



 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 114/430 (26%), Positives = 169/430 (39%), Gaps = 81/430 (18%)

Query: 114  MQITTGRYHTL-LISNSSVFSCGSSLCGVLGH----GPETTQCVSFTRINFPSAAHVVQV 168
            + I  GR+H + L S   V S G+   G LG        T Q V       P      ++
Sbjct: 1274 LSIACGRWHNMTLTSERQVLSWGAGEFGQLGLDHNLSKGTPQMVKALDGRAP-----CKI 1328

Query: 169  SASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL--N 226
                 H+A +L+SG++   G N     GH DT +    PR+ + L+ +  K  TAGL  N
Sbjct: 1329 LCGGWHSAAILESGKILLWGKNVYGQLGHGDT-KSCSAPRVNQYLR-LEGKVRTAGLGAN 1386

Query: 227  FTGFLTIRGHVHTCGSNTHGQLGHGDTLDRP--TPKSI-APLEEVG--SVVQIAAGPSYM 281
             T  + +   V   GSN  GQLG    LD P  T K++   +EE+   ++ Q+AAG  + 
Sbjct: 1387 HTLVVMVANKVFAMGSNIDGQLG----LDDPSRTGKNVPVSIEELNGKNICQVAAGDQHS 1442

Query: 282  LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 341
            LA++  G V+S+G      LGH    D+L P  +    +    V  ++ G     A+ + 
Sbjct: 1443 LALSVFGEVWSWGGSPFGQLGHETITDKLAPTPLLERHKIPPDVKSIACGYTFSAAMSAK 1502

Query: 342  GYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK---------SHLAVQVCARKRKTFVLVD 392
            G V+TWG G  G LGH  ++    P  +              H+A  V   + KT  L  
Sbjct: 1503 GEVFTWGNGESGELGHAPKVLTYAPSLIKDFSEVVQIACGFKHMAGIVFKPRMKTIELTG 1562

Query: 393  T----------------------------------------------GSVYGFGWMGFGS 406
            +                                              G V+ +G    G 
Sbjct: 1563 SSNIGDNSTTFSGSIAAGSVSGSTRSHTTGHHTTRTSAFSASNQKRHGCVFVWGEDTCGQ 1622

Query: 407  LGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDT 466
            LG   RG+      P ++ SL A  +  IS     +  VTD G L+  G +E  +LG   
Sbjct: 1623 LGI--RGL-QAARSPSLMQSLLATSIVHISANSDMSAFVTDSGSLYVSGGSEHGRLGLGH 1679

Query: 467  LRGCLEPTEI 476
            +     P EI
Sbjct: 1680 MAPAPTPVEI 1689



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 66/253 (26%), Positives = 112/253 (44%), Gaps = 12/253 (4%)

Query: 236  HVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 295
            H++T G   +G+LGHG      TP+ I        +V++A G  + LA + +G VY++G+
Sbjct: 1180 HIYTWGCGVNGRLGHGFHTGYSTPQEITSFPSNTKIVEVACGCEHSLARSFDGGVYAWGA 1239

Query: 296  GSNFCLGHGEQHD------ELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 349
            G    LG  E  D         P+ +   +R    ++ ++ G  H + L S   V +WG 
Sbjct: 1240 GDRGQLGSLENFDCVKINYAFNPQPVLNLKR--YFILSIACGRWHNMTLTSERQVLSWGA 1297

Query: 350  GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGF 409
            G  G LG    + K  P+ + +L      ++      +  ++++G +  +G   +G LG 
Sbjct: 1298 GEFGQLGLDHNLSKGTPQMVKALDGRAPCKILCGGWHSAAILESGKILLWGKNVYGQLGH 1357

Query: 410  PDRGVSDKVLRPRILDSLRAH-HVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLR 468
             D   +     PR+   LR    V     G  HT+VV    ++F  G N   QLG D   
Sbjct: 1358 GD---TKSCSAPRVNQYLRLEGKVRTAGLGANHTLVVMVANKVFAMGSNIDGQLGLDDPS 1414

Query: 469  GCLEPTEIFIQEM 481
               +   + I+E+
Sbjct: 1415 RTGKNVPVSIEEL 1427



 Score = 86.7 bits (213), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 86/308 (27%), Positives = 132/308 (42%), Gaps = 17/308 (5%)

Query: 131 VFSCGSSLCGVLGHGPETTQCVSFT----RINFPSAAHVVQVSASENHAAFVLQSGQVFT 186
           +++ G  + G LGHG E T+         RI   +   VV ++  ++  A +  +G+V+T
Sbjct: 517 IYTYGKGVFGRLGHGVEYTRSEESVKHPKRIETLAKMSVVFIACGKDSTAALTDTGKVYT 576

Query: 187 CGDNSSFCCGHRDTNRP--IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNT 244
            G ++    G   + +P  I  P+LV+ L      Q++ G N     T        GSNT
Sbjct: 577 WGKSAQGKLG-LGSGKPLAIVVPQLVQDLSSHVVCQISLGRNHAACSTDMHKFFVWGSNT 635

Query: 245 HGQLG--HGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLG 302
            GQLG  H  +   P P  I  L E  ++  IA G  + L  T  G V S G G +  LG
Sbjct: 636 FGQLGIPHISSY-MPDPYEITSLREA-NIRSIACGGWHTLISTNTGSVMSCGKGWHGQLG 693

Query: 303 HGEQHDELQPRAIQTFRRKGIH------VVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 356
           HG+            + +K +       +V+VSAG E   A+ + G ++TWGKG    LG
Sbjct: 694 HGDYESLTALSKTLPYFKKIVEGFGDSFIVKVSAGKESSAAITNKGRLFTWGKGDEYQLG 753

Query: 357 HGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSD 416
           H    ++  P  +        V V         L  +G  Y +G    G LG  +    +
Sbjct: 754 HESSKNEAYPREVEFFAKIRVVDVSIGDSHMLALDYSGLPYSWGNGSAGQLGHGEMCERE 813

Query: 417 KVLRPRIL 424
            + RP +L
Sbjct: 814 TLPRPIML 821



 Score = 85.1 bits (209), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 81/302 (26%), Positives = 131/302 (43%), Gaps = 27/302 (8%)

Query: 119 GRYHTLLIS-NSSVFSCGSSLCGVLGHG------------PETTQCVSFTRINFPSAAHV 165
           G+ HTL +S +  V SCGS++ G LG G            P   + +   +    S  ++
Sbjct: 131 GKQHTLFLSADGVVLSCGSNVYGQLGMGDHMLSRSTPVSEPSKQKSLDKLQAIIQSLNNI 190

Query: 166 VQVSASENHAAFVLQSGQVFTCGDNSSFCCG-HRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V ++A   H+  +  +G++F+ G  S    G   D N     PR V +L+      +  G
Sbjct: 191 VGIAAGYYHSLALNDTGKIFSWGSGSWGKLGIGSDANAE--SPRFVASLQNSKVVHIACG 248

Query: 225 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 284
            + T  +T  G V T G    GQLGH    +  +P+  A L + G+  +I  G  + L +
Sbjct: 249 AHHTAAITTVGDVWTWGKGLRGQLGHKSVKEEFSPRLNASLRKCGA-QKIRCGDDHTLVI 307

Query: 285 TGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
             +G +YS G+ ++  LG G+  D + P  +  F  +   V+ + A     +AL ++G V
Sbjct: 308 LRSGQLYSMGANTHGQLGLGDATDRIIPTLVTGFANE--KVIDIDAKGCRSIALTNTGKV 365

Query: 345 YTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGF 404
           + +G      L         LP      KS L + V       F + DTG +  F W  F
Sbjct: 366 FAFGNETEPHLNRIPRFVAGLP------KSDLIIAVARTAHFDFAISDTGQL--FRWRPF 417

Query: 405 GS 406
            S
Sbjct: 418 SS 419



 Score = 85.1 bits (209), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 88/353 (24%), Positives = 142/353 (40%), Gaps = 12/353 (3%)

Query: 120  RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 179
            RY   L     +++ G  + G LGHG  T         +FPS   +V+V+    H+    
Sbjct: 1170 RYEVDLEGEYHIYTWGCGVNGRLGHGFHTGYSTPQEITSFPSNTKIVEVACGCEHSLARS 1229

Query: 180  QSGQVFTCGDNSSFCCGHRDTNRPI-----FRPRLVEALKGVPCKQVTAGLNFTGFLTIR 234
              G V+  G       G  +    +     F P+ V  LK      +  G      LT  
Sbjct: 1230 FDGGVYAWGAGDRGQLGSLENFDCVKINYAFNPQPVLNLKRYFILSIACGRWHNMTLTSE 1289

Query: 235  GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 294
              V + G+   GQLG    L + TP+ +  L+   +  +I  G  +  A+  +G +  +G
Sbjct: 1290 RQVLSWGAGEFGQLGLDHNLSKGTPQMVKALDGR-APCKILCGGWHSAAILESGKILLWG 1348

Query: 295  SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGA 354
                  LGHG+      PR  Q  R +G  V     G  H + +  +  V+  G    G 
Sbjct: 1349 KNVYGQLGHGDTKSCSAPRVNQYLRLEG-KVRTAGLGANHTLVVMVANKVFAMGSNIDGQ 1407

Query: 355  LGHGD--EIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDR 412
            LG  D     K +P  +  L      QV A  + +  L   G V+ +G   FG LG    
Sbjct: 1408 LGLDDPSRTGKNVPVSIEELNGKNICQVAAGDQHSLALSVFGEVWSWGGSPFGQLGH--E 1465

Query: 413  GVSDKVLRPRILDSLR-AHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 464
             ++DK+    +L+  +    V  I+ G   +  ++ +G +F +G+ E  +LGH
Sbjct: 1466 TITDKLAPTPLLERHKIPPDVKSIACGYTFSAAMSAKGEVFTWGNGESGELGH 1518



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 73/257 (28%), Positives = 115/257 (44%), Gaps = 20/257 (7%)

Query: 235 GHVHTCGSNTHGQLGHGDTLDRPT-----PKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 289
           G+++T G    G+LGHG    R       PK I  L ++ SVV IA G     A+T  G 
Sbjct: 515 GYIYTYGKGVFGRLGHGVEYTRSEESVKHPKRIETLAKM-SVVFIACGKDSTAALTDTGK 573

Query: 290 VYSFGSGS--NFCLGHGEQHDELQPRAIQTFRRKGIHVV-RVSAGDEHVVALDSSGYVYT 346
           VY++G  +     LG G+    + P+ +Q       HVV ++S G  H          + 
Sbjct: 574 VYTWGKSAQGKLGLGSGKPLAIVVPQLVQDLSS---HVVCQISLGRNHAACSTDMHKFFV 630

Query: 347 WGKGYCGALGHGDEIDKTLPEP--LSSLKSHLAVQVCARKRKTFVLVDTGSVY--GFGWM 402
           WG    G LG    I   +P+P  ++SL+      +      T +  +TGSV   G GW 
Sbjct: 631 WGSNTFGQLGI-PHISSYMPDPYEITSLREANIRSIACGGWHTLISTNTGSVMSCGKGWH 689

Query: 403 G-FGSLGFPDRGVSDKVLR--PRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNER 459
           G  G   +       K L    +I++      + ++S G   +  +T++GRLF +G  + 
Sbjct: 690 GQLGHGDYESLTALSKTLPYFKKIVEGFGDSFIVKVSAGKESSAAITNKGRLFTWGKGDE 749

Query: 460 AQLGHDTLRGCLEPTEI 476
            QLGH++ +    P E+
Sbjct: 750 YQLGHESSKNEAYPREV 766



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 102/417 (24%), Positives = 166/417 (39%), Gaps = 65/417 (15%)

Query: 119  GRYHTLLIS-NSSVFSCGSSLCGVLG-HGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
            G  HTL++   + VF+ GS++ G LG   P  T       I   +  ++ QV+A + H+ 
Sbjct: 1384 GANHTLVVMVANKVFAMGSNIDGQLGLDDPSRTGKNVPVSIEELNGKNICQVAAGDQHSL 1443

Query: 177  FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVP-CKQVTAGLNFTGFLTIRG 235
             +   G+V++ G +     GH      +    L+E  K  P  K +  G  F+  ++ +G
Sbjct: 1444 ALSVFGEVWSWGGSPFGQLGHETITDKLAPTPLLERHKIPPDVKSIACGYTFSAAMSAKG 1503

Query: 236  HVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM-----------LAV 284
             V T G+   G+LGH   +    P  I    EV   VQIA G  +M           + +
Sbjct: 1504 EVFTWGNGESGELGHAPKVLTYAPSLIKDFSEV---VQIACGFKHMAGIVFKPRMKTIEL 1560

Query: 285  TG------NGVVYS--FGSGS------------------NFCLGHGEQHD---------- 308
            TG      N   +S    +GS                   F   + ++H           
Sbjct: 1561 TGSSNIGDNSTTFSGSIAAGSVSGSTRSHTTGHHTTRTSAFSASNQKRHGCVFVWGEDTC 1620

Query: 309  -ELQPRAIQTFRRKGI-------HVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 360
             +L  R +Q  R   +        +V +SA  +    +  SG +Y  G    G LG G  
Sbjct: 1621 GQLGIRGLQAARSPSLMQSLLATSIVHISANSDMSAFVTDSGSLYVSGGSEHGRLGLGHM 1680

Query: 361  IDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLR 420
                 P  + SL +   ++V         L +   VY +G   +G+ G  +   ++ VL 
Sbjct: 1681 APAPTPVEIRSLNTVKIMKVACGTYHCLALTEEKRVYAWGDGKWGNAGVSN---TNDVLE 1737

Query: 421  PRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLE-PTEI 476
            P+ L SL A  +  +  G +H+  ++  G LF +G N   QLG  T     + PT+I
Sbjct: 1738 PQELSSLAACSIIGVHAGGFHSAALSQYGDLFMWGKNSNGQLGLGTTSAAEDSPTKI 1794



 Score = 79.3 bits (194), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 57/204 (27%), Positives = 90/204 (44%), Gaps = 10/204 (4%)

Query: 276  AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHV 335
            A   Y + + G   +Y++G G N  LGHG       P+ I +F      +V V+ G EH 
Sbjct: 1167 ANKRYEVDLEGEYHIYTWGCGVNGRLGHGFHTGYSTPQEITSFPSN-TKIVEVACGCEHS 1225

Query: 336  VALDSSGYVYTWGKGYCGALGHGDEIDKTL------PEPLSSLKSHLAVQVCARKRKTFV 389
            +A    G VY WG G  G LG  +  D         P+P+ +LK +  + +   +     
Sbjct: 1226 LARSFDGGVYAWGAGDRGQLGSLENFDCVKINYAFNPQPVLNLKRYFILSIACGRWHNMT 1285

Query: 390  LVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRG 449
            L     V  +G   FG LG  D  +S     P+++ +L      +I  G +H+  + + G
Sbjct: 1286 LTSERQVLSWGAGEFGQLGL-DHNLSKGT--PQMVKALDGRAPCKILCGGWHSAAILESG 1342

Query: 450  RLFGFGDNERAQLGHDTLRGCLEP 473
            ++  +G N   QLGH   + C  P
Sbjct: 1343 KILLWGKNVYGQLGHGDTKSCSAP 1366



 Score = 74.7 bits (182), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 93/366 (25%), Positives = 153/366 (41%), Gaps = 28/366 (7%)

Query: 131  VFSCGSSLCGVLG-HGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCG- 188
            VF  G   CG LG  G +  +  S  +     A  +V +SA+ + +AFV  SG ++  G 
Sbjct: 1612 VFVWGEDTCGQLGIRGLQAARSPSLMQSLL--ATSIVHISANSDMSAFVTDSGSLYVSGG 1669

Query: 189  -DNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQ 247
             ++     GH     P   P  + +L  V   +V  G      LT    V+  G    G 
Sbjct: 1670 SEHGRLGLGHM---APAPTPVEIRSLNTVKIMKVACGTYHCLALTEEKRVYAWGDGKWGN 1726

Query: 248  LGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGE-Q 306
             G  +T D   P+ ++ L    S++ + AG  +  A++  G ++ +G  SN  LG G   
Sbjct: 1727 AGVSNTNDVLEPQELSSLAAC-SIIGVHAGGFHSAALSQYGDLFMWGKNSNGQLGLGTTS 1785

Query: 307  HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD--SSGYVYTWGKGYCGALGHGDEIDKT 364
              E  P  I      G+ V+ VS G  H   L   +S  ++T G    G LG GD +D++
Sbjct: 1786 AAEDSPTKISNL--DGV-VMDVSLGANHSAVLMQVTSPNLFTCGLNANGQLGLGDFVDRS 1842

Query: 365  LPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRIL 424
                + +L     V        T  +   G +  +G    G LG    G+S  +  P  L
Sbjct: 1843 TLTAVDALDDRQIVSASCGAAHTAAVSQYGDLITWGNGRNGQLGL-KAGLSKDIENPVQL 1901

Query: 425  DSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLR------------GCLE 472
             ++    + ++  G   T+VV+++G L+  G      LG ++ R            G ++
Sbjct: 1902 PAICNDPMVKVVCGQEVTIVVSEKGELYMAGYESTIGLGGNSSRRREFDVSFREVEGLIQ 1961

Query: 473  PTEIFI 478
            PT+I +
Sbjct: 1962 PTQIAV 1967



 Score = 69.7 bits (169), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 60/200 (30%), Positives = 95/200 (47%), Gaps = 24/200 (12%)

Query: 290 VYSFGSGSNFCLGHGEQHDELQ--PRAIQTFRRKGIHVVRVSA-GDEHVVALDSSGYVYT 346
           V+ +G G N  LG+  Q +E+Q  P  +  FR     +V+V A G +H + L + G V +
Sbjct: 92  VFMWGDGENGKLGN--QSEEIQHVPYIVPAFRNV---LVKVCALGKQHTLFLSADGVVLS 146

Query: 347 WGKGYCGALGHGDE-IDKTLP--EP-----LSSLKSHLA-----VQVCARKRKTFVLVDT 393
            G    G LG GD  + ++ P  EP     L  L++ +      V + A    +  L DT
Sbjct: 147 CGSNVYGQLGMGDHMLSRSTPVSEPSKQKSLDKLQAIIQSLNNIVGIAAGYYHSLALNDT 206

Query: 394 GSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFG 453
           G ++ +G   +G LG    G       PR + SL+   V  I+ G +HT  +T  G ++ 
Sbjct: 207 GKIFSWGSGSWGKLGI---GSDANAESPRFVASLQNSKVVHIACGAHHTAAITTVGDVWT 263

Query: 454 FGDNERAQLGHDTLRGCLEP 473
           +G   R QLGH +++    P
Sbjct: 264 WGKGLRGQLGHKSVKEEFSP 283



 Score = 68.2 bits (165), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 69/250 (27%), Positives = 111/250 (44%), Gaps = 12/250 (4%)

Query: 114  MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
            M++  G YH L L     V++ G    G  G    T   +    ++  +A  ++ V A  
Sbjct: 1698 MKVACGTYHCLALTEEKRVYAWGDGKWGNAGVS-NTNDVLEPQELSSLAACSIIGVHAGG 1756

Query: 173  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL- 231
             H+A + Q G +F  G NS+   G   T+     P  +  L GV    V+ G N +  L 
Sbjct: 1757 FHSAALSQYGDLFMWGKNSNGQLGLGTTSAAEDSPTKISNLDGV-VMDVSLGANHSAVLM 1815

Query: 232  -TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 290
                 ++ TCG N +GQLG GD +DR T  ++  L++   +V  + G ++  AV+  G +
Sbjct: 1816 QVTSPNLFTCGLNANGQLGLGDFVDRSTLTAVDALDDR-QIVSASCGAAHTAAVSQYGDL 1874

Query: 291  YSFGSGSNFCLG--HGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 348
             ++G+G N  LG   G   D   P  +       +  V+V  G E  + +   G +Y   
Sbjct: 1875 ITWGNGRNGQLGLKAGLSKDIENPVQLPAICNDPM--VKVVCGQEVTIVVSEKGELYM-- 1930

Query: 349  KGYCGALGHG 358
             GY   +G G
Sbjct: 1931 AGYESTIGLG 1940



 Score = 55.8 bits (133), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 40/151 (26%), Positives = 69/151 (45%), Gaps = 4/151 (2%)

Query: 319  RRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLA- 377
             +K    +R  A   + V L+   ++YTWG G  G LGHG     + P+ ++S  S+   
Sbjct: 1156 EKKHFEQIRDRANKRYEVDLEGEYHIYTWGCGVNGRLGHGFHTGYSTPQEITSFPSNTKI 1215

Query: 378  VQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKV---LRPRILDSLRAHHVSQ 434
            V+V      +      G VY +G    G LG  +     K+     P+ + +L+ + +  
Sbjct: 1216 VEVACGCEHSLARSFDGGVYAWGAGDRGQLGSLENFDCVKINYAFNPQPVLNLKRYFILS 1275

Query: 435  ISTGLYHTVVVTDRGRLFGFGDNERAQLGHD 465
            I+ G +H + +T   ++  +G  E  QLG D
Sbjct: 1276 IACGRWHNMTLTSERQVLSWGAGEFGQLGLD 1306



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 103/470 (21%), Positives = 188/470 (40%), Gaps = 72/470 (15%)

Query: 50  PQKFRSLVDLAASQLCALHSI-------YAGMSRNVQIELLNRCNGNWKRV--------- 93
           P K +SL  L A  + +L++I       Y  ++ N   ++ +  +G+W ++         
Sbjct: 171 PSKQKSLDKLQAI-IQSLNNIVGIAAGYYHSLALNDTGKIFSWGSGSWGKLGIGSDANAE 229

Query: 94  -LRFLQSVEHSSDIVETSAGNMQITTGRYHTLLISN-SSVFSCGSSLCGVLGHGPETTQC 151
             RF+ S+++S  +         I  G +HT  I+    V++ G  L G LGH  ++ + 
Sbjct: 230 SPRFVASLQNSKVV--------HIACGAHHTAAITTVGDVWTWGKGLRGQLGH--KSVKE 279

Query: 152 VSFTRINFP-SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLV 210
               R+N         ++   ++H   +L+SGQ+++ G N+    G  D    I  P LV
Sbjct: 280 EFSPRLNASLRKCGAQKIRCGDDHTLVILRSGQLYSMGANTHGQLGLGDATDRII-PTLV 338

Query: 211 EALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS 270
                     + A    +  LT  G V   G+ T   L          P+ +A L +   
Sbjct: 339 TGFANEKVIDIDAKGCRSIALTNTGKVFAFGNETEPHLNR-------IPRFVAGLPKSDL 391

Query: 271 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRR-KGIHVVRVS 329
           ++ +A    +  A++  G ++ +   S+         +E   R +++F   KG  VVR+ 
Sbjct: 392 IIAVARTAHFDFAISDTGQLFRWRPFSS---------EEESSRMLESFHAIKG--VVRMF 440

Query: 330 AGDEHVVALDSSGYVYTWGK-GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTF 388
            G  H+  + S     T        +     +I +   E   S K   A+         F
Sbjct: 441 CGHNHMAVICSPEMGCTQAMISRNKSTSFSSDISRASLEKFPSEKILPALGTNTEYLDEF 500

Query: 389 VLVDT---------GSVYGFGWMGFGSLGFPDRGV-----SDKVLRPRILDSLRAHHVSQ 434
             V           G +Y +G   FG LG    GV      + V  P+ +++L    V  
Sbjct: 501 ATVQVRDSPSREGDGYIYTYGKGVFGRLG---HGVEYTRSEESVKHPKRIETLAKMSVVF 557

Query: 435 ISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQEMEED 484
           I+ G   T  +TD G+++ +G + + +LG     G  +P  I + ++ +D
Sbjct: 558 IACGKDSTAALTDTGKVYTWGKSAQGKLG----LGSGKPLAIVVPQLVQD 603


>gi|198421655|ref|XP_002121487.1| PREDICTED: similar to hect domain and RLD 4 [Ciona intestinalis]
          Length = 1029

 Score =  122 bits (306), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 104/316 (32%), Positives = 146/316 (46%), Gaps = 22/316 (6%)

Query: 155 TRINFPSAAHVVQVSASENHAAFVLQSGQVFTCG---DNSSFCCGHRDTNRPIFRPRLVE 211
           T IN      +  V  S   A F+L+ G V T G   DN     G             V 
Sbjct: 23  TEINCFGKTIIKSVRVSRTIAVFLLEDGTVHTFGAENDNIGHSAGSTK----------VS 72

Query: 212 ALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSV 271
           AL+ V    +  G +    +  +G V+  G N   QLG  D    P+PK I  L     +
Sbjct: 73  ALETVHIVDIALGDSHILAIDDKGKVYGWGGNDKDQLGWTDGNCYPSPKKIKSLS--NKI 130

Query: 272 VQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHD-ELQPRAIQTFRRKGIHVVRVSA 330
           VQ+A G S+ L +  NG ++S GS +   LG G++   EL+P        KGI   ++SA
Sbjct: 131 VQVACGHSHSLFLGSNGALWSAGSNNYGQLGFGDKSSTELRP----LISLKGIPFSQISA 186

Query: 331 GDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVL 390
           G  H   +  SG V+ WG+   G LG GD +D+ +P  L +L+S     +CA +  T  L
Sbjct: 187 GFWHSFCVTHSGAVFCWGRNDNGQLGLGDCVDRNVPVLLKALRSLSVKYICAGELHTAAL 246

Query: 391 VDTGSVYGFGWMGFGSLGFPDRGVSD-KVLRPRILDSLRAHHVSQISTGLYHTV-VVTDR 448
              G V+ FG   FG LG    G     V  PR +  L  + V+QI+ G  HTV  V   
Sbjct: 247 TLDGGVFTFGSNQFGQLGHGSSGPEPLPVSTPRKIFELMGNEVTQIACGAQHTVCYVGKT 306

Query: 449 GRLFGFGDNERAQLGH 464
           G ++ FG+N  +QLG+
Sbjct: 307 GNVYTFGNNNHSQLGY 322



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 71/204 (34%), Positives = 105/204 (51%), Gaps = 18/204 (8%)

Query: 114 MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQ----CVSFTRINFPSAAHVVQV 168
           +Q+  G  H+L + SN +++S GS+  G LG G +++      +S   I F       Q+
Sbjct: 131 VQVACGHSHSLFLGSNGALWSAGSNNYGQLGFGDKSSTELRPLISLKGIPFS------QI 184

Query: 169 SASENHAAFVLQSGQVFTCGDNSSFCCGHRD-TNRPIFRPRLVEALKGVPCKQVTAGLNF 227
           SA   H+  V  SG VF  G N +   G  D  +R +  P L++AL+ +  K + AG   
Sbjct: 185 SAGFWHSFCVTHSGAVFCWGRNDNGQLGLGDCVDRNV--PVLLKALRSLSVKYICAGELH 242

Query: 228 TGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP--LEEVGS-VVQIAAGPSYMLAV 284
           T  LT+ G V T GSN  GQLGHG +   P P S      E +G+ V QIA G  + +  
Sbjct: 243 TAALTLDGGVFTFGSNQFGQLGHGSSGPEPLPVSTPRKIFELMGNEVTQIACGAQHTVCY 302

Query: 285 TGN-GVVYSFGSGSNFCLGHGEQH 307
            G  G VY+FG+ ++  LG+  +H
Sbjct: 303 VGKTGNVYTFGNNNHSQLGYIPKH 326


>gi|27882442|gb|AAH44667.1| Herc2 protein, partial [Mus musculus]
          Length = 1183

 Score =  122 bits (306), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 85/281 (30%), Positives = 139/281 (49%), Gaps = 9/281 (3%)

Query: 166 VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 225
           V V++   H   +   G+V++ G+      GH + + P  RPR++E+L+G+    V AG 
Sbjct: 391 VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRS-PCDRPRVIESLRGIEVVDVAAGG 449

Query: 226 NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA--AGPSYMLA 283
             +  +T  G ++T G   +G+LGH D+ D+  PK +  L+    V+ IA  +G +  L 
Sbjct: 450 AHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQG-HRVIDIACGSGDAQTLC 508

Query: 284 VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 343
           +T +  V+S+G G    LG G       P  I +    G+ VV+V  G +  VAL  SG 
Sbjct: 509 LTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL--TGLGVVKVECGSQFSVALTKSGA 566

Query: 344 VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 403
           VYTWGKG    LGHG +     P  +  L+    + +           + G VY +G   
Sbjct: 567 VYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDND 626

Query: 404 FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV 444
            G LG    G ++ + RPR++ +L+   V++++ G  HT+ 
Sbjct: 627 EGQLG---DGTTNAIQRPRLVAALQGKKVNRVACGSAHTLA 664



 Score =  122 bits (305), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 82/269 (30%), Positives = 131/269 (48%), Gaps = 6/269 (2%)

Query: 207 PRLVEALKGVPCKQV--TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP 264
           P L+E+++ V  K+V   +G      L+  G V++ G    G+LGHG+      P+ I  
Sbjct: 377 PTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIES 436

Query: 265 LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH 324
           L  +  VV +AAG ++   VT  G +Y++G G    LGH +  D+L+P+ ++  +   + 
Sbjct: 437 LRGI-EVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVI 495

Query: 325 VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARK 384
            +   +GD   + L     V++WG G  G LG G      +P  + SL     V+V    
Sbjct: 496 DIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGS 555

Query: 385 RKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV 444
           + +  L  +G+VY +G   +  LG    G  D V RPR +  L+   V  I+TG  H V 
Sbjct: 556 QFSVALTKSGAVYTWGKGDYHRLG---HGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 612

Query: 445 VTDRGRLFGFGDNERAQLGHDTLRGCLEP 473
            T+ G ++ +GDN+  QLG  T      P
Sbjct: 613 CTEDGEVYTWGDNDEGQLGDGTTNAIQRP 641



 Score =  102 bits (255), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 84/265 (31%), Positives = 126/265 (47%), Gaps = 12/265 (4%)

Query: 96  FLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFT 155
            L+S++H    ++  A N   + G++   L S   V+S G +  G LGHG   + C    
Sbjct: 379 LLESIQHV--FIKKVAVN---SGGKHCLALSSEGEVYSWGEAEDGKLGHG-NRSPCDRPR 432

Query: 156 RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 215
            I       VV V+A   H+A V  +G ++T G       GH D+   + +P+LVEAL+G
Sbjct: 433 VIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQL-KPKLVEALQG 491

Query: 216 VPCKQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
                +   +G   T  LT    V + G   +G+LG G +     P  I  L  +G VV+
Sbjct: 492 HRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLG-VVK 550

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           +  G  + +A+T +G VY++G G    LGHG      +PR +Q    +G  V+ ++ G  
Sbjct: 551 VECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGL--QGKKVIAIATGSL 608

Query: 334 HVVALDSSGYVYTWGKGYCGALGHG 358
           H V     G VYTWG    G LG G
Sbjct: 609 HCVCCTEDGEVYTWGDNDEGQLGDG 633



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 77/247 (31%), Positives = 125/247 (50%), Gaps = 12/247 (4%)

Query: 235 GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
           G ++  G N  GQLG   G  +  PTP +++A L  V    Q+  G   + AVT +G +Y
Sbjct: 301 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPV----QLIGGEQTLFAVTADGKLY 356

Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 351
           + G G+   LG G       P  +++ +   I  V V++G +H +AL S G VY+WG+  
Sbjct: 357 ATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAE 416

Query: 352 CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 411
            G LGHG+      P  + SL+    V V A    +  +   G +Y +G   +G LG  D
Sbjct: 417 DGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD 476

Query: 412 RGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG 469
              S+  L+P+++++L+ H V  I+  +G   T+ +TD   ++ +GD +  +LG     G
Sbjct: 477 ---SEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDG 533

Query: 470 CLEPTEI 476
           C  P +I
Sbjct: 534 CKVPMKI 540



 Score = 55.5 bits (132), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 50/167 (29%), Positives = 76/167 (45%), Gaps = 4/167 (2%)

Query: 118 TGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
           +G   TL L  + +V+S G    G LG G  +  C    +I+  +   VV+V      + 
Sbjct: 501 SGDAQTLCLTDDDTVWSWGDGDYGKLGRG-GSDGCKVPMKIDSLTGLGVVKVECGSQFSV 559

Query: 177 FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
            + +SG V+T G       GH   +  + RPR V+ L+G     +  G       T  G 
Sbjct: 560 ALTKSGAVYTWGKGDYHRLGHGSDDH-VRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGE 618

Query: 237 VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
           V+T G N  GQLG G T     P+ +A L+    V ++A G ++ LA
Sbjct: 619 VYTWGDNDEGQLGDGTTNAIQRPRLVAALQG-KKVNRVACGSAHTLA 664



 Score = 52.0 bits (123), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 36/147 (24%), Positives = 71/147 (48%), Gaps = 5/147 (3%)

Query: 332 DEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 391
           D+  ++   SG +Y WG  + G LG  +     +P P  +L +   VQ+   ++  F + 
Sbjct: 291 DDWTLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVT 350

Query: 392 DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRG 449
             G +Y     G+G+ G    G ++ V  P +L+S++   + +++  +G  H + ++  G
Sbjct: 351 ADGKLYA---TGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 407

Query: 450 RLFGFGDNERAQLGHDTLRGCLEPTEI 476
            ++ +G+ E  +LGH     C  P  I
Sbjct: 408 EVYSWGEAEDGKLGHGNRSPCDRPRVI 434


>gi|357460713|ref|XP_003600638.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
 gi|355489686|gb|AES70889.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
          Length = 1032

 Score =  122 bits (306), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 94/317 (29%), Positives = 147/317 (46%), Gaps = 30/317 (9%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V  V+   NHAA V + G+V+  G       G R  +  I  P++V+ L  +  K V  G
Sbjct: 306 VQNVALGGNHAAIVTKQGEVYCWGQGKCGRLGQR-IDMDISSPKIVDTLSDIRVKNVACG 364

Query: 225 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRP-------TPKSIAPLEEVGSVVQIAAG 277
              T  LT  G V+  G++    +   D +D         T K   P+E + S+  IA G
Sbjct: 365 EYHTCALTDSGEVYAWGND----VSCSDLVDEGRIRSQWLTHKLSLPVEGI-SISSIACG 419

Query: 278 PSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
             +   V+  G ++++G G+   LGHG  H    P+ +++   KG+ V  V+ G  H  A
Sbjct: 420 EWHTAIVSSCGRLFTYGDGTFGVLGHGSYHSFSSPKEVESL--KGLCVRSVACGTWHTAA 477

Query: 338 L-----------DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRK 386
           +            S+G ++TWG    G LGH D ++K +P  +S L  +  VQV   +  
Sbjct: 478 IIEISAERFKYNTSTGKLFTWGDADEGRLGHADNVNKLVPTCVSQLVDYDFVQVSCGRMM 537

Query: 387 TFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT 446
           T  L + G V+  G   +G LG P   V D+ +   +   L+  +V  IS G YH  V+T
Sbjct: 538 TLALTNMGKVFAMGSAKYGQLGNPH--VKDRAV--VVEGMLKQEYVKMISCGSYHVAVLT 593

Query: 447 DRGRLFGFGDNERAQLG 463
             G ++ +G  E  +LG
Sbjct: 594 SSGSVYTWGKGENGELG 610



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 80/267 (29%), Positives = 126/267 (47%), Gaps = 23/267 (8%)

Query: 116 ITTGRYHTLLISNS-SVFSCGS--SLCGVLGHGPETTQCVSFTRINFP-SAAHVVQVSAS 171
           +  G YHT  +++S  V++ G+  S   ++  G   +Q ++  +++ P     +  ++  
Sbjct: 361 VACGEYHTCALTDSGEVYAWGNDVSCSDLVDEGRIRSQWLTH-KLSLPVEGISISSIACG 419

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG-- 229
           E H A V   G++FT GD +    GH  +      P+ VE+LKG+  + V  G   T   
Sbjct: 420 EWHTAIVSSCGRLFTYGDGTFGVLGH-GSYHSFSSPKEVESLKGLCVRSVACGTWHTAAI 478

Query: 230 ---------FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 280
                    + T  G + T G    G+LGH D +++  P  ++ L +    VQ++ G   
Sbjct: 479 IEISAERFKYNTSTGKLFTWGDADEGRLGHADNVNKLVPTCVSQLVDY-DFVQVSCGRMM 537

Query: 281 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTF-RRKGIHVVRVSAGDEHVVALD 339
            LA+T  G V++ GS     LG+    D    RA+      K  +V  +S G  HV  L 
Sbjct: 538 TLALTNMGKVFAMGSAKYGQLGNPHVKD----RAVVVEGMLKQEYVKMISCGSYHVAVLT 593

Query: 340 SSGYVYTWGKGYCGALGHGDEIDKTLP 366
           SSG VYTWGKG  G LG GD  ++  P
Sbjct: 594 SSGSVYTWGKGENGELGLGDTENRYTP 620



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 49/163 (30%), Positives = 70/163 (42%), Gaps = 18/163 (11%)

Query: 323 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCA 382
           + V  V+ G  H   +   G VY WG+G CG LG   ++D + P+ + +L       V  
Sbjct: 304 LDVQNVALGGNHAAIVTKQGEVYCWGQGKCGRLGQRIDMDISSPKIVDTLSDIRVKNVAC 363

Query: 383 RKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHH---------VS 433
            +  T  L D+G VY +G          D   SD V   RI      H          +S
Sbjct: 364 GEYHTCALTDSGEVYAWG---------NDVSCSDLVDEGRIRSQWLTHKLSLPVEGISIS 414

Query: 434 QISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 476
            I+ G +HT +V+  GRLF +GD     LGH +      P E+
Sbjct: 415 SIACGEWHTAIVSSCGRLFTYGDGTFGVLGHGSYHSFSSPKEV 457



 Score = 69.7 bits (169), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 64/236 (27%), Positives = 103/236 (43%), Gaps = 20/236 (8%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHG-------PETTQ-----CVSFTRINFPSA 162
           I  G +HT ++S+   +F+ G    GVLGHG       P+  +     CV          
Sbjct: 416 IACGEWHTAIVSSCGRLFTYGDGTFGVLGHGSYHSFSSPKEVESLKGLCVRSVACGTWHT 475

Query: 163 AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 222
           A ++++SA      +   +G++FT GD      GH D    +  P  V  L      QV+
Sbjct: 476 AAIIEISAE--RFKYNTSTGKLFTWGDADEGRLGHADNVNKLV-PTCVSQLVDYDFVQVS 532

Query: 223 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 282
            G   T  LT  G V   GS  +GQLG+    DR     +  + +   V  I+ G  ++ 
Sbjct: 533 CGRMMTLALTNMGKVFAMGSAKYGQLGNPHVKDRAV--VVEGMLKQEYVKMISCGSYHVA 590

Query: 283 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
            +T +G VY++G G N  LG G+  +   P  ++  R + +    ++ G    VA+
Sbjct: 591 VLTSSGSVYTWGKGENGELGLGDTENRYTPCFVEALRDRQVDT--ITCGPSFTVAI 644



 Score = 66.2 bits (160), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 61/218 (27%), Positives = 92/218 (42%), Gaps = 19/218 (8%)

Query: 271 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 330
           V  +A G ++   VT  G VY +G G    LG     D   P+ + T     I V  V+ 
Sbjct: 306 VQNVALGGNHAAIVTKQGEVYCWGQGKCGRLGQRIDMDISSPKIVDTL--SDIRVKNVAC 363

Query: 331 GDEHVVALDSSGYVYTWGKGY-CGAL-GHGDEIDKTLPEPLSSLKSHLAVQ-VCARKRKT 387
           G+ H  AL  SG VY WG    C  L   G    + L   LS     +++  +   +  T
Sbjct: 364 GEYHTCALTDSGEVYAWGNDVSCSDLVDEGRIRSQWLTHKLSLPVEGISISSIACGEWHT 423

Query: 388 FVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVV-- 445
            ++   G ++ +G   FG LG    G       P+ ++SL+   V  ++ G +HT  +  
Sbjct: 424 AIVSSCGRLFTYGDGTFGVLG---HGSYHSFSSPKEVESLKGLCVRSVACGTWHTAAIIE 480

Query: 446 ---------TDRGRLFGFGDNERAQLGHDTLRGCLEPT 474
                    T  G+LF +GD +  +LGH      L PT
Sbjct: 481 ISAERFKYNTSTGKLFTWGDADEGRLGHADNVNKLVPT 518



 Score = 49.3 bits (116), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 53/186 (28%), Positives = 78/186 (41%), Gaps = 18/186 (9%)

Query: 102 HSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPS 161
           H++ I+E SA   +  T        S   +F+ G +  G LGH     + V  T ++   
Sbjct: 474 HTAAIIEISAERFKYNT--------STGKLFTWGDADEGRLGHADNVNKLVP-TCVSQLV 524

Query: 162 AAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEA---LKGVPC 218
               VQVS        +   G+VF  G       G+     P  + R V     LK    
Sbjct: 525 DYDFVQVSCGRMMTLALTNMGKVFAMGSAKYGQLGN-----PHVKDRAVVVEGMLKQEYV 579

Query: 219 KQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGP 278
           K ++ G      LT  G V+T G   +G+LG GDT +R TP  +  L +   V  I  GP
Sbjct: 580 KMISCGSYHVAVLTSSGSVYTWGKGENGELGLGDTENRYTPCFVEALRD-RQVDTITCGP 638

Query: 279 SYMLAV 284
           S+ +A+
Sbjct: 639 SFTVAI 644


>gi|395746465|ref|XP_002825266.2| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
            HERC2-like [Pongo abelii]
          Length = 4581

 Score =  122 bits (306), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 86/280 (30%), Positives = 139/280 (49%), Gaps = 9/280 (3%)

Query: 166  VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 225
            V V++   H   +   G+V++ G+      GH + + P  RPR++E+L+G+    V AG 
Sbjct: 3789 VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRS-PCDRPRVIESLRGIEVVDVAAGG 3847

Query: 226  NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA--AGPSYMLA 283
              +  +T  G ++T G   +G+LGH D+ D+  PK +  L+    VV IA  +G +  L 
Sbjct: 3848 AHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQG-HRVVDIACGSGDAQTLC 3906

Query: 284  VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 343
            +T +  V+S+G G    LG G       P  I +    G+ VV+V  G +  VAL  SG 
Sbjct: 3907 LTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL--TGLGVVKVECGSQFSVALTKSGA 3964

Query: 344  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 403
            VYTWGKG    LGHG +     P  +  L+    + +           + G VY +G   
Sbjct: 3965 VYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDND 4024

Query: 404  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV 443
             G LG    G ++ + RPR++ +L+   V++++ G  HT+
Sbjct: 4025 EGQLG---DGTTNAIQRPRLVAALQGKKVNRVACGSAHTL 4061



 Score =  121 bits (304), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 82/269 (30%), Positives = 131/269 (48%), Gaps = 6/269 (2%)

Query: 207  PRLVEALKGVPCKQV--TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP 264
            P L+E+++ V  K+V   +G      L+  G V++ G    G+LGHG+      P+ I  
Sbjct: 3775 PTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIES 3834

Query: 265  LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH 324
            L  +  VV +AAG ++   VT  G +Y++G G    LGH +  D+L+P+ ++  +   + 
Sbjct: 3835 LRGI-EVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVV 3893

Query: 325  VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARK 384
             +   +GD   + L     V++WG G  G LG G      +P  + SL     V+V    
Sbjct: 3894 DIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGS 3953

Query: 385  RKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV 444
            + +  L  +G+VY +G   +  LG    G  D V RPR +  L+   V  I+TG  H V 
Sbjct: 3954 QFSVALTKSGAVYTWGKGDYHRLG---HGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 4010

Query: 445  VTDRGRLFGFGDNERAQLGHDTLRGCLEP 473
             T+ G ++ +GDN+  QLG  T      P
Sbjct: 4011 CTEDGEVYTWGDNDEGQLGDGTTNAIQRP 4039



 Score =  117 bits (294), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 92/311 (29%), Positives = 151/311 (48%), Gaps = 24/311 (7%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V Q++ +E     + ++G+V+T   NS       DT      P+LV+ L      ++ A 
Sbjct: 453 VTQIACAEKRFLILSRNGRVYTQAYNS-------DT----LAPQLVQGLASRNIVKIAAH 501

Query: 225 LNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGS-VVQIAAGPS 279
            +   +L +   G V++ G    G+LGHGDT+    PK I+    ++ G  VV IA G +
Sbjct: 502 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGST 561

Query: 280 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS--AGDEHVVA 337
           Y  A+T  G +Y++G G+   LGHG   DE  P  +     KG+ V+ V+  +GD   +A
Sbjct: 562 YSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGL--KGLKVIDVACGSGDAQTLA 619

Query: 338 LDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVY 397
           +  +G V++WG G  G LG G       P+ +  L+    V+V    + +  L   G VY
Sbjct: 620 VTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVY 679

Query: 398 GFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDN 457
            +G      LG    G  + V  P++L+ L+   V  ++ G  H + +T+   +  +G N
Sbjct: 680 SWGKGDNQRLG---HGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSN 736

Query: 458 ERAQLGHDTLR 468
           ++ Q   DTLR
Sbjct: 737 DQCQ-HFDTLR 746



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 94/332 (28%), Positives = 159/332 (47%), Gaps = 24/332 (7%)

Query: 161  SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCC---GHRDTNRPIFRPR-LVEALKGV 216
            SA +VVQV+        V   G+V+ CG+ + +     G      PI  P   + AL   
Sbjct: 2741 SALNVVQVAGGSKSLFAVTVEGKVYACGEATKWPAWGLGISSGTVPI--PHGXITALSSY 2798

Query: 217  PCKQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQI 274
              K+V   +G + TGF  + G V + G    G+LGH   +    P+ I  L+    +  I
Sbjct: 2799 VVKKVAVHSGTSQTGFXPVDGKVFSWGEGDDGKLGHFSRM----PRLIEALK-TKRIRDI 2853

Query: 275  AAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--D 332
            A G S+  A+T +G +Y++G G    LGHG+   +L+P+ ++     G  V++V+ G  D
Sbjct: 2854 ACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLL--GHRVIQVACGSRD 2911

Query: 333  EHVVALDSSGYVYTWGKGYCGALGHGDEIDK-TLPEPLSSLKSHLAVQVCARKRKTFVLV 391
               +AL   G V++ G G    +G G E+    +P+ +  L      Q+    + +  L 
Sbjct: 2912 AQTLALTDEGLVFSLGDGDLWKIGPGPEVKGCNIPQNIERLNGQGVCQIECGAQFSLALT 2971

Query: 392  DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS-TGLYHTVVVTDRGR 450
             +G V+ +G   +  LG    G    V +P++++ LR   +   S +G  H + VTD G+
Sbjct: 2972 KSGVVWTWGKGDYFRLG---HGSDVHVRKPQVVEGLRGKKIVACSCSGALHCLAVTDSGQ 3028

Query: 451  LFGFGDNERAQLGHDTLRGCLEPTEIFIQEME 482
            ++ +GDN+  Q G+ T     +PT   +Q +E
Sbjct: 3029 VYAWGDNDHGQQGNGTTTVNRKPT--LVQGLE 3058



 Score =  102 bits (254), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 84/265 (31%), Positives = 126/265 (47%), Gaps = 12/265 (4%)

Query: 96   FLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFT 155
             L+S++H    ++  A N   + G++   L S   V+S G +  G LGHG   + C    
Sbjct: 3777 LLESIQHV--FIKKVAVN---SGGKHCLALSSEGEVYSWGEAEDGKLGHG-NRSPCDRPR 3830

Query: 156  RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 215
             I       VV V+A   H+A V  +G ++T G       GH D+   + +P+LVEAL+G
Sbjct: 3831 VIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQL-KPKLVEALQG 3889

Query: 216  VPCKQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
                 +   +G   T  LT    V + G   +G+LG G +     P  I  L  +G VV+
Sbjct: 3890 HRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLG-VVK 3948

Query: 274  IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
            +  G  + +A+T +G VY++G G    LGHG      +PR +Q    +G  V+ ++ G  
Sbjct: 3949 VECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGL--QGKKVIAIATGSL 4006

Query: 334  HVVALDSSGYVYTWGKGYCGALGHG 358
            H V     G VYTWG    G LG G
Sbjct: 4007 HCVCCTEDGEVYTWGDNDEGQLGDG 4031



 Score =  101 bits (251), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 77/247 (31%), Positives = 125/247 (50%), Gaps = 12/247 (4%)

Query: 235  GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
            G ++  G N  GQLG   G  +  PTP +++A L  V    Q+  G   + AVT +G +Y
Sbjct: 3699 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPV----QLIGGEQTLFAVTADGKLY 3754

Query: 292  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 351
            + G G+   LG G       P  +++ +   I  V V++G +H +AL S G VY+WG+  
Sbjct: 3755 ATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAE 3814

Query: 352  CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 411
             G LGHG+      P  + SL+    V V A    +  +   G +Y +G   +G LG  D
Sbjct: 3815 DGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD 3874

Query: 412  RGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG 469
               S+  L+P+++++L+ H V  I+  +G   T+ +TD   ++ +GD +  +LG     G
Sbjct: 3875 ---SEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDG 3931

Query: 470  CLEPTEI 476
            C  P +I
Sbjct: 3932 CKVPMKI 3938



 Score = 98.2 bits (243), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 88/328 (26%), Positives = 149/328 (45%), Gaps = 26/328 (7%)

Query: 50  PQKFRSLVDLAASQLCALHSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVET 109
           P +   L +L  +Q+      +  +SRN ++    +   +     + +Q +  S +IV+ 
Sbjct: 442 PIQCEGLANLGVTQIACAEKRFLILSRNGRV--YTQAYNSDTLAPQLVQGLA-SRNIVKI 498

Query: 110 SAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSA 162
           +A     + G ++  L +   V+S G    G LGHG       P+     S  +    + 
Sbjct: 499 AAH----SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQ----AG 550

Query: 163 AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 222
            HVV ++    ++A +   G+++T G  +    GH  +      P LV  LKG+    V 
Sbjct: 551 KHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVA 609

Query: 223 AGLNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 280
            G      L +   G V + G   +G+LG G +    TPK I  L+++  VV++  G  +
Sbjct: 610 CGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL-DVVKVRCGSQF 668

Query: 281 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 340
            +A+T +G VYS+G G N  LGHG +     P+ ++    +G  V+ V+AG  H +AL  
Sbjct: 669 SIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGL--QGKKVIDVAAGSTHCLALTE 726

Query: 341 SGYVYTWGKGYCGALGHGDEIDKTLPEP 368
              V++WG        H D +  T PEP
Sbjct: 727 DSEVHSWGSN--DQCQHFDTLRVTKPEP 752



 Score = 76.3 bits (186), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 58/219 (26%), Positives = 100/219 (45%), Gaps = 21/219 (9%)

Query: 271 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 330
           V QIA      L ++ NG VY+    S          D L P+ +Q    + I  +   +
Sbjct: 453 VTQIACAEKRFLILSRNGRVYTQAYNS----------DTLAPQLVQGLASRNIVKIAAHS 502

Query: 331 GDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLA----VQVCARKRK 386
              H +AL ++G VY+WG G  G LGHGD +    P+ +S+     A    V +      
Sbjct: 503 DGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTY 562

Query: 387 TFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVV 444
           +  +   G +Y +G   +G LG    G S+    P ++  L+   V  ++  +G   T+ 
Sbjct: 563 SAAITAEGELYTWGRGNYGRLG---HGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLA 619

Query: 445 VTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQEMEE 483
           VT+ G+++ +GD +  +LG     GC  P    I+++++
Sbjct: 620 VTENGQVWSWGDGDYGKLGRGGSDGCKTPK--LIEKLQD 656



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 64/225 (28%), Positives = 98/225 (43%), Gaps = 6/225 (2%)

Query: 116  ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
            I  G  H+  L S+  +++ G    G LGHG  TTQ +    +       V+QV+     
Sbjct: 2853 IACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQ-LKPKMVKVLLGHRVIQVACGSRD 2911

Query: 175  AA--FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            A    +   G VF+ GD   +  G     +    P+ +E L G    Q+  G  F+  LT
Sbjct: 2912 AQTLALTDEGLVFSLGDGDLWKIGPGPEVKGCNIPQNIERLNGQGVCQIECGAQFSLALT 2971

Query: 233  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
              G V T G   + +LGHG  +    P+ +  L     V    +G  + LAVT +G VY+
Sbjct: 2972 KSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVACSCSGALHCLAVTDSGQVYA 3031

Query: 293  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
            +G   +   G+G      +P  +Q    +G  + RV+ G  H VA
Sbjct: 3032 WGDNDHGQQGNGTTTVNRKPTLVQGL--EGQKITRVACGSSHSVA 3074



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 50/167 (29%), Positives = 76/167 (45%), Gaps = 4/167 (2%)

Query: 118  TGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
            +G   TL L  + +V+S G    G LG G  +  C    +I+  +   VV+V      + 
Sbjct: 3899 SGDAQTLCLTDDDTVWSWGDGDYGKLGRG-GSDGCKVPMKIDSLTGLGVVKVECGSQFSV 3957

Query: 177  FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
             + +SG V+T G       GH   +  + RPR V+ L+G     +  G       T  G 
Sbjct: 3958 ALTKSGAVYTWGKGDYHRLGHGSDDH-VRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGE 4016

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
            V+T G N  GQLG G T     P+ +A L+    V ++A G ++ LA
Sbjct: 4017 VYTWGDNDEGQLGDGTTNAIQRPRLVAALQG-KKVNRVACGSAHTLA 4062



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 52/169 (30%), Positives = 76/169 (44%), Gaps = 8/169 (4%)

Query: 118 TGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
           +G   TL ++ N  V+S G    G LG G  +  C +   I       VV+V      + 
Sbjct: 612 SGDAQTLAVTENGQVWSWGDGDYGKLGRG-GSDGCKTPKLIEKLQDLDVVKVRCGSQFSI 670

Query: 177 FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
            + + GQV++ G   +   GH  T   +  P+L+E L+G     V AG      LT    
Sbjct: 671 ALTKDGQVYSWGKGDNQRLGH-GTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSE 729

Query: 237 VHTCGSNTHGQLGHGDTL--DRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
           VH+ GSN   Q  H DTL   +P P ++  L +   +V IA GP+   A
Sbjct: 730 VHSWGSNDQCQ--HFDTLRVTKPEPAALPGL-DTKHIVGIACGPAQSFA 775



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 49/169 (28%), Positives = 77/169 (45%), Gaps = 10/169 (5%)

Query: 122  HTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
             TL +++   VFS G      +G GPE   C     I   +   V Q+      +  + +
Sbjct: 2913 QTLALTDEGLVFSLGDGDLWKIGPGPEVKGCNIPQNIERLNGQGVCQIECGAQFSLALTK 2972

Query: 181  SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTA----GLNFTGFLTIRGH 236
            SG V+T G    F  GH  ++  + +P++VE L+G   K++ A    G      +T  G 
Sbjct: 2973 SGVVWTWGKGDYFRLGH-GSDVHVRKPQVVEGLRG---KKIVACSCSGALHCLAVTDSGQ 3028

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 285
            V+  G N HGQ G+G T     P  +  LE    + ++A G S+ +A T
Sbjct: 3029 VYAWGDNDHGQQGNGTTTVNRKPTLVQGLEG-QKITRVACGSSHSVAWT 3076



 Score = 52.0 bits (123), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 36/147 (24%), Positives = 71/147 (48%), Gaps = 5/147 (3%)

Query: 332  DEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 391
            D+  ++   SG +Y WG  + G LG  +     +P P  +L +   VQ+   ++  F + 
Sbjct: 3689 DDWTLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVT 3748

Query: 392  DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRG 449
              G +Y     G+G+ G    G ++ V  P +L+S++   + +++  +G  H + ++  G
Sbjct: 3749 ADGKLYA---TGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 3805

Query: 450  RLFGFGDNERAQLGHDTLRGCLEPTEI 476
             ++ +G+ E  +LGH     C  P  I
Sbjct: 3806 EVYSWGEAEDGKLGHGNRSPCDRPRVI 3832


>gi|242014091|ref|XP_002427731.1| hect E3 ubiquitin ligase, putative [Pediculus humanus corporis]
 gi|212512172|gb|EEB14993.1| hect E3 ubiquitin ligase, putative [Pediculus humanus corporis]
          Length = 4834

 Score =  122 bits (306), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 93/317 (29%), Positives = 153/317 (48%), Gaps = 11/317 (3%)

Query: 161  SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQ 220
            SA   VQ+   E     V   G+V+  G  +    G   T+  I  P L+E+++ +  K+
Sbjct: 3999 SALRPVQLVGGEQTLLAVTSDGKVYATGYGAGGRLGLGGTDT-ILTPTLLESIQHIFIKK 4057

Query: 221  V--TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGP 278
            V   +G      L+  G V++ G    G+LGHG+      P+ I  L+    +V IA G 
Sbjct: 4058 VAVNSGGKHCLALSTDGKVYSWGEGDDGKLGHGNKNGCDHPQLIDALQG-KEIVDIACGG 4116

Query: 279  SYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS--AGDEHVV 336
            ++  AVT  G +Y++G G    LGHG+  D+++P+ ++T    G  V+ ++  +GD   +
Sbjct: 4117 AHSAAVTAGGEIYTWGKGRYGRLGHGDSEDQMKPKLVETL--IGFKVIDIACGSGDAQTL 4174

Query: 337  ALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSV 396
             +     V++WG G  G LG G      +P  + SL     V+V    + +  L  +GSV
Sbjct: 4175 CITDDDNVWSWGDGDYGKLGRGGSDGCKIPMKIESLAGLGVVKVECGSQFSVALTRSGSV 4234

Query: 397  YGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGD 456
            Y +G   +  LG    G  + V  P+ + +L+   +  I+TG  H V  +D G +F +GD
Sbjct: 4235 YTWGKGDYHRLG---HGSDEHVRHPKKIAALQGKKIICIATGSLHCVACSDLGEVFTWGD 4291

Query: 457  NERAQLGHDTLRGCLEP 473
            N+  QLG  T+     P
Sbjct: 4292 NDEGQLGDGTMNAIHRP 4308



 Score =  118 bits (296), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 91/327 (27%), Positives = 158/327 (48%), Gaps = 10/327 (3%)

Query: 152  VSFTRINFPSAAHVVQVSASENHAAFVLQS-GQVFTCGDNSSFCCGHRDTNRPIFRPRLV 210
            VSF   ++     V  +S + +H+     S  +VF  G N     G    ++ +  P   
Sbjct: 2954 VSFLATDYEEIPEVKTLSETSSHSKLWSDSPTKVFVWGLNDKDQLGGLKGSK-VKVPVYS 3012

Query: 211  EALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEE-VG 269
            E+L  +    +  G      ++  G ++ CG  T+G+LG G + +  TP  +  L + V 
Sbjct: 3013 ESLTALKPIHIAGGSKSLFIVSYDGKLYACGEGTNGRLGLGHSNNVATPCQLTSLNQYVI 3072

Query: 270  SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS 329
              V + +G  + +A+T +G V+S+G G +  LGH  +    +P+ I+  + K I    ++
Sbjct: 3073 KKVAVHSGGKHAMALTLDGKVFSWGEGEDGKLGHDNRLSLDRPKMIEALKSKRIR--DIA 3130

Query: 330  AGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVC--ARKRKT 387
             G  H  A+ S+G ++TWG G  G LGHGD + +  P+ + +L  H  VQV   +R  +T
Sbjct: 3131 CGSSHSAAISSTGELFTWGLGEYGRLGHGDNLTQLRPKLVKALLGHHIVQVACGSRDAQT 3190

Query: 388  FVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTD 447
              L   G V+ +G   FG LG   RG S+    P  ++ L    V  I  G   ++ +T 
Sbjct: 3191 LALSAEGLVFSWGDGDFGKLG---RGGSEGCDIPHNIERLNGLGVCMIECGAQFSLALTK 3247

Query: 448  RGRLFGFGDNERAQLGHDTLRGCLEPT 474
             G+++ +G  +  +LGH + +   +PT
Sbjct: 3248 FGQVYTWGKGDYFRLGHGSDQHVRKPT 3274



 Score =  114 bits (286), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 84/323 (26%), Positives = 150/323 (46%), Gaps = 15/323 (4%)

Query: 161  SAAHVVQVSASENHAAFVLQSGQVFTCGD--NSSFCCGHRDTNRPIFRPRLVEALKGVPC 218
            +A   + ++        V   G+++ CG+  N     GH +    +  P  + +L     
Sbjct: 3016 TALKPIHIAGGSKSLFIVSYDGKLYACGEGTNGRLGLGHSNN---VATPCQLTSLNQYVI 3072

Query: 219  KQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA 276
            K+V   +G      LT+ G V + G    G+LGH + L    PK I  L+    +  IA 
Sbjct: 3073 KKVAVHSGGKHAMALTLDGKVFSWGEGEDGKLGHDNRLSLDRPKMIEALKS-KRIRDIAC 3131

Query: 277  GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEH 334
            G S+  A++  G ++++G G    LGHG+   +L+P+ ++     G H+V+V+ G  D  
Sbjct: 3132 GSSHSAAISSTGELFTWGLGEYGRLGHGDNLTQLRPKLVKALL--GHHIVQVACGSRDAQ 3189

Query: 335  VVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 394
             +AL + G V++WG G  G LG G      +P  +  L       +    + +  L   G
Sbjct: 3190 TLALSAEGLVFSWGDGDFGKLGRGGSEGCDIPHNIERLNGLGVCMIECGAQFSLALTKFG 3249

Query: 395  SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 454
             VY +G   +  LG    G    V +P +++SL    +  ++ G  H +  TD+G+++ +
Sbjct: 3250 QVYTWGKGDYFRLG---HGSDQHVRKPTLVESLSEKKIVHVAVGALHCLCATDQGQVYAW 3306

Query: 455  GDNERAQLGHDTLRGCLEPTEIF 477
            GDN+  Q G+ T+    +P+ + 
Sbjct: 3307 GDNDHGQQGNGTILVNRKPSLVL 3329



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 93/341 (27%), Positives = 156/341 (45%), Gaps = 27/341 (7%)

Query: 137 SLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCG 196
           S C  LG  P++  C S   +       V Q+  +E     +  +G+V+    +S   C 
Sbjct: 459 SSCHDLGTSPQS--CDSIRELG------VKQIVCAERWLLILTLTGKVYIMYYSSETQC- 509

Query: 197 HRDTNRPIFRPRLVEALKGVPCKQVTAGLN--FTGFLTIRGHVHTCGSNTHGQLGHGDTL 254
                     P  +E   G    ++ A  +   +  L+  G V++ G+   G+LGHGD  
Sbjct: 510 ----------PEQIEGFDGKEISKLAAHADGKHSLALSCDGDVYSWGNGDGGRLGHGDNN 559

Query: 255 DRPTPKSIAPLEEVG-SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPR 313
            R  P  I  L  VG +V+ I+ G +Y  AVT +G VY++G G+   LGHG   D   P 
Sbjct: 560 SRDQPTKITEL--VGKNVIHISCGATYSAAVTSSGEVYTWGRGNYGRLGHGTSEDHTVPT 617

Query: 314 AIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
            +   +   I  +   +GD   +A+ ++G V++WG G  G LG G       P+ +  L+
Sbjct: 618 LVVGLKDYFIVDIACGSGDAQTLAVTNTGLVFSWGDGGYGKLGTGGSDGSKTPKLIEKLQ 677

Query: 374 SHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVS 433
                +V    + +  L  +GSVY +G      LG    G  + V  P++++ L    + 
Sbjct: 678 DIEVARVYCGSQFSLALTKSGSVYTWGKGDNHRLG---HGSENHVRFPKLVEGLNGKCIK 734

Query: 434 QISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPT 474
           +++ G  H + +TD G ++G+G N+  Q+G  +     EPT
Sbjct: 735 KVAVGSGHVLALTDDGEVYGWGRNDNGQVGETSETNVSEPT 775



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 72/244 (29%), Positives = 122/244 (50%), Gaps = 6/244 (2%)

Query: 235  GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 294
            G ++  G N  GQLG  +      P S   L  +  V Q+  G   +LAVT +G VY+ G
Sbjct: 3968 GTIYGWGHNHRGQLGGVEGPKVKIPTSCEALSALRPV-QLVGGEQTLLAVTSDGKVYATG 4026

Query: 295  SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGA 354
             G+   LG G     L P  +++ +   I  V V++G +H +AL + G VY+WG+G  G 
Sbjct: 4027 YGAGGRLGLGGTDTILTPTLLESIQHIFIKKVAVNSGGKHCLALSTDGKVYSWGEGDDGK 4086

Query: 355  LGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGV 414
            LGHG++     P+ + +L+    V +      +  +   G +Y +G   +G LG    G 
Sbjct: 4087 LGHGNKNGCDHPQLIDALQGKEIVDIACGGAHSAAVTAGGEIYTWGKGRYGRLG---HGD 4143

Query: 415  SDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLE 472
            S+  ++P+++++L    V  I+  +G   T+ +TD   ++ +GD +  +LG     GC  
Sbjct: 4144 SEDQMKPKLVETLIGFKVIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKI 4203

Query: 473  PTEI 476
            P +I
Sbjct: 4204 PMKI 4207



 Score = 92.4 bits (228), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 76/266 (28%), Positives = 119/266 (44%), Gaps = 14/266 (5%)

Query: 96   FLQSVEHSSDIVETSAGNMQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSF 154
             L+S++H           + + +G  H L +S +  V+S G    G LGHG     C   
Sbjct: 4046 LLESIQH------IFIKKVAVNSGGKHCLALSTDGKVYSWGEGDDGKLGHG-NKNGCDHP 4098

Query: 155  TRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALK 214
              I+      +V ++    H+A V   G+++T G       GH D+   + +P+LVE L 
Sbjct: 4099 QLIDALQGKEIVDIACGGAHSAAVTAGGEIYTWGKGRYGRLGHGDSEDQM-KPKLVETLI 4157

Query: 215  GVPCKQVTAGLNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV 272
            G     +  G      L I    +V + G   +G+LG G +     P  I  L  +G VV
Sbjct: 4158 GFKVIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKIPMKIESLAGLG-VV 4216

Query: 273  QIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGD 332
            ++  G  + +A+T +G VY++G G    LGHG       P+ I     +G  ++ ++ G 
Sbjct: 4217 KVECGSQFSVALTRSGSVYTWGKGDYHRLGHGSDEHVRHPKKIAAL--QGKKIICIATGS 4274

Query: 333  EHVVALDSSGYVYTWGKGYCGALGHG 358
             H VA    G V+TWG    G LG G
Sbjct: 4275 LHCVACSDLGEVFTWGDNDEGQLGDG 4300



 Score = 89.7 bits (221), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 77/249 (30%), Positives = 110/249 (44%), Gaps = 21/249 (8%)

Query: 119  GRYHTLLISNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHVVQVSAS 171
            G++   L  +  VFS G    G LGH        P+  + +   RI          ++  
Sbjct: 3081 GKHAMALTLDGKVFSWGEGEDGKLGHDNRLSLDRPKMIEALKSKRIR--------DIACG 3132

Query: 172  ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN--FTG 229
             +H+A +  +G++FT G       GH D N    RP+LV+AL G    QV  G     T 
Sbjct: 3133 SSHSAAISSTGELFTWGLGEYGRLGHGD-NLTQLRPKLVKALLGHHIVQVACGSRDAQTL 3191

Query: 230  FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 289
             L+  G V + G    G+LG G +     P +I  L  +G V  I  G  + LA+T  G 
Sbjct: 3192 ALSAEGLVFSWGDGDFGKLGRGGSEGCDIPHNIERLNGLG-VCMIECGAQFSLALTKFGQ 3250

Query: 290  VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 349
            VY++G G  F LGHG      +P  +++   K I  V V+ G  H +     G VY WG 
Sbjct: 3251 VYTWGKGDYFRLGHGSDQHVRKPTLVESLSEKKI--VHVAVGALHCLCATDQGQVYAWGD 3308

Query: 350  GYCGALGHG 358
               G  G+G
Sbjct: 3309 NDHGQQGNG 3317



 Score = 89.4 bits (220), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 84/285 (29%), Positives = 131/285 (45%), Gaps = 18/285 (6%)

Query: 119 GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
           G++   L  +  V+S G+   G LGHG   ++    T+I      +V+ +S    ++A V
Sbjct: 530 GKHSLALSCDGDVYSWGNGDGGRLGHGDNNSRDQP-TKITELVGKNVIHISCGATYSAAV 588

Query: 179 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR--GH 236
             SG+V+T G  +    GH  T+     P LV  LK      +  G      L +   G 
Sbjct: 589 TSSGEVYTWGRGNYGRLGH-GTSEDHTVPTLVVGLKDYFIVDIACGSGDAQTLAVTNTGL 647

Query: 237 VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 296
           V + G   +G+LG G +    TPK I  L+++  V ++  G  + LA+T +G VY++G G
Sbjct: 648 VFSWGDGGYGKLGTGGSDGSKTPKLIEKLQDI-EVARVYCGSQFSLALTKSGSVYTWGKG 706

Query: 297 SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 356
            N  LGHG ++    P+ ++    K I  V V +G  HV+AL   G VY WG+   G +G
Sbjct: 707 DNHRLGHGSENHVRFPKLVEGLNGKCIKKVAVGSG--HVLALTDDGEVYGWGRNDNGQVG 764

Query: 357 HGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGW 401
              E + + P  L+ L+            K  V +D G      W
Sbjct: 765 ETSETNVSEPTLLTLLQG-----------KNIVDIDCGPNQSIAW 798



 Score = 49.7 bits (117), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 47/155 (30%), Positives = 68/155 (43%), Gaps = 3/155 (1%)

Query: 131  VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDN 190
            VFS G    G LG G  +  C     I   +   V  +      +  + + GQV+T G  
Sbjct: 3199 VFSWGDGDFGKLGRGG-SEGCDIPHNIERLNGLGVCMIECGAQFSLALTKFGQVYTWGKG 3257

Query: 191  SSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGH 250
              F  GH  +++ + +P LVE+L       V  G       T +G V+  G N HGQ G+
Sbjct: 3258 DYFRLGH-GSDQHVRKPTLVESLSEKKIVHVAVGALHCLCATDQGQVYAWGDNDHGQQGN 3316

Query: 251  GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 285
            G  L    P  +  LE V  V ++A G S+ +A T
Sbjct: 3317 GTILVNRKPSLVLNLEGV-RVNRVACGSSHSIAWT 3350



 Score = 47.8 bits (112), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 35/138 (25%), Positives = 68/138 (49%), Gaps = 5/138 (3%)

Query: 341  SGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 400
            SG +Y WG  + G LG  +     +P    +L +   VQ+   ++    +   G VY   
Sbjct: 3967 SGTIYGWGHNHRGQLGGVEGPKVKIPTSCEALSALRPVQLVGGEQTLLAVTSDGKVYA-- 4024

Query: 401  WMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDNE 458
              G+G+ G    G +D +L P +L+S++   + +++  +G  H + ++  G+++ +G+ +
Sbjct: 4025 -TGYGAGGRLGLGGTDTILTPTLLESIQHIFIKKVAVNSGGKHCLALSTDGKVYSWGEGD 4083

Query: 459  RAQLGHDTLRGCLEPTEI 476
              +LGH    GC  P  I
Sbjct: 4084 DGKLGHGNKNGCDHPQLI 4101


>gi|355694483|gb|AER99684.1| hect domain and RLD 2 [Mustela putorius furo]
          Length = 1082

 Score =  122 bits (306), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 83/269 (30%), Positives = 131/269 (48%), Gaps = 6/269 (2%)

Query: 207 PRLVEALKGVPCKQV--TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP 264
           P L+E+++ V  K+V   +G      L+  G V++ G    G+LGHG+      P+ I  
Sbjct: 277 PTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIES 336

Query: 265 LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH 324
           L  +  VV +AAG ++   VT  G +Y++G G    LGH +  D+L+P+ ++  +   + 
Sbjct: 337 LRGI-EVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVV 395

Query: 325 VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARK 384
            V   +GD   + L     V++WG G  G LG G      +P  + SL     V+V    
Sbjct: 396 DVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGS 455

Query: 385 RKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV 444
           + +  L  +G+VY +G   +  LG    G  D V RPR +  L+   V  I+TG  H V 
Sbjct: 456 QFSVALTKSGAVYTWGKGDYHRLG---HGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 512

Query: 445 VTDRGRLFGFGDNERAQLGHDTLRGCLEP 473
            T+ G ++ +GDN+  QLG  T      P
Sbjct: 513 CTEDGEVYTWGDNDEGQLGDGTTNAIQRP 541



 Score =  122 bits (305), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 85/281 (30%), Positives = 139/281 (49%), Gaps = 9/281 (3%)

Query: 166 VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 225
           V V++   H   +   G+V++ G+      GH + + P  RPR++E+L+G+    V AG 
Sbjct: 291 VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRS-PCDRPRVIESLRGIEVVDVAAGG 349

Query: 226 NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA--AGPSYMLA 283
             +  +T  G ++T G   +G+LGH D+ D+  PK +  L+    VV +A  +G +  L 
Sbjct: 350 AHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQG-HRVVDVACGSGDAQTLC 408

Query: 284 VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 343
           +T +  V+S+G G    LG G       P  I +    G+ VV+V  G +  VAL  SG 
Sbjct: 409 LTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL--TGLGVVKVECGSQFSVALTKSGA 466

Query: 344 VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 403
           VYTWGKG    LGHG +     P  +  L+    + +           + G VY +G   
Sbjct: 467 VYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDND 526

Query: 404 FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV 444
            G LG    G ++ + RPR++ +L+   V++++ G  HT+ 
Sbjct: 527 EGQLG---DGTTNAIQRPRLVAALQGKKVNRVACGSAHTLA 564



 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 85/265 (32%), Positives = 126/265 (47%), Gaps = 12/265 (4%)

Query: 96  FLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFT 155
            L+S++H    ++  A N   + G++   L S   V+S G +  G LGHG   + C    
Sbjct: 279 LLESIQHV--FIKKVAVN---SGGKHCLALSSEGEVYSWGEAEDGKLGHG-NRSPCDRPR 332

Query: 156 RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 215
            I       VV V+A   H+A V  +G ++T G       GH D+   + +P+LVEAL+G
Sbjct: 333 VIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQL-KPKLVEALQG 391

Query: 216 VPCKQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
                V   +G   T  LT    V + G   +G+LG G +     P  I  L  +G VV+
Sbjct: 392 HRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLG-VVK 450

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           +  G  + +A+T +G VY++G G    LGHG      +PR +Q    +G  V+ ++ G  
Sbjct: 451 VECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGL--QGKKVIAIATGSL 508

Query: 334 HVVALDSSGYVYTWGKGYCGALGHG 358
           H V     G VYTWG    G LG G
Sbjct: 509 HCVCCTEDGEVYTWGDNDEGQLGDG 533



 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 76/247 (30%), Positives = 125/247 (50%), Gaps = 12/247 (4%)

Query: 235 GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
           G ++  G N  GQLG   G  +  PTP +++A L  V    Q+  G   + AVT +G +Y
Sbjct: 201 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPV----QLIGGEQTLFAVTADGKLY 256

Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 351
           + G G+   LG G       P  +++ +   I  V V++G +H +AL S G VY+WG+  
Sbjct: 257 ATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAE 316

Query: 352 CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 411
            G LGHG+      P  + SL+    V V A    +  +   G +Y +G   +G LG  D
Sbjct: 317 DGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD 376

Query: 412 RGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG 469
              S+  L+P+++++L+ H V  ++  +G   T+ +TD   ++ +GD +  +LG     G
Sbjct: 377 ---SEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDG 433

Query: 470 CLEPTEI 476
           C  P +I
Sbjct: 434 CKVPMKI 440



 Score = 55.5 bits (132), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 50/167 (29%), Positives = 76/167 (45%), Gaps = 4/167 (2%)

Query: 118 TGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
           +G   TL L  + +V+S G    G LG G  +  C    +I+  +   VV+V      + 
Sbjct: 401 SGDAQTLCLTDDDTVWSWGDGDYGKLGRG-GSDGCKVPMKIDSLTGLGVVKVECGSQFSV 459

Query: 177 FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
            + +SG V+T G       GH   +  + RPR V+ L+G     +  G       T  G 
Sbjct: 460 ALTKSGAVYTWGKGDYHRLGHGSDDH-VRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGE 518

Query: 237 VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
           V+T G N  GQLG G T     P+ +A L+    V ++A G ++ LA
Sbjct: 519 VYTWGDNDEGQLGDGTTNAIQRPRLVAALQG-KKVNRVACGSAHTLA 564



 Score = 53.1 bits (126), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 36/147 (24%), Positives = 72/147 (48%), Gaps = 5/147 (3%)

Query: 332 DEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 391
           D+ +++   SG +Y WG  + G LG  +     +P P  +L +   VQ+   ++  F + 
Sbjct: 191 DDWILSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVT 250

Query: 392 DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRG 449
             G +Y     G+G+ G    G ++ V  P +L+S++   + +++  +G  H + ++  G
Sbjct: 251 ADGKLYA---TGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 307

Query: 450 RLFGFGDNERAQLGHDTLRGCLEPTEI 476
            ++ +G+ E  +LGH     C  P  I
Sbjct: 308 EVYSWGEAEDGKLGHGNRSPCDRPRVI 334


>gi|357137054|ref|XP_003570116.1| PREDICTED: uncharacterized protein LOC100825305 isoform 1
           [Brachypodium distachyon]
          Length = 1005

 Score =  122 bits (306), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 102/350 (29%), Positives = 153/350 (43%), Gaps = 27/350 (7%)

Query: 131 VFSCGSSLCGVLGHGPETTQCVSFTRI-NFPSAAHVVQVSASENHAAFVLQSGQVFTCGD 189
           +F  G  L  VL     +   VS  R+ N      V  VS  E HAA V + G+VF+ G 
Sbjct: 235 IFVWGDVLGSVLDDRDTSKANVSLPRLLNSTQILDVQNVSCGEKHAAIVTKQGEVFSWGK 294

Query: 190 NSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLG 249
                 GH+  +  +  P+++E+L     K +  G   T  L I G +   G  TH    
Sbjct: 295 EDGGRLGHK-VSVGVLHPKIIESLAFTHVKAIAFGAKHTCALAISGELFEWGEGTHSLGV 353

Query: 250 HGDTLDRPTP---KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ 306
             D   R      K   PLE V SVV++A G  +   ++ +G ++++G G+   LGHG+ 
Sbjct: 354 WDDQCQRSQWYPHKLFGPLEGV-SVVKMACGQWHTAIISSSGQLFTYGDGTFGVLGHGDT 412

Query: 307 HDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL----------DSSGYVYTWGKGYCGALG 356
               +P+ +++   KG+ V  V+ G  H  A+            SG ++TWG    G LG
Sbjct: 413 SSVARPKEVESL--KGLRVKAVACGPWHTAAIVEILGTVKSNAPSGKLFTWGDADRGKLG 470

Query: 357 HGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLG---FPDRG 413
           H D+  K +P  + +L      QV   K  T  L  TG V+  G    G LG     D  
Sbjct: 471 HSDKESKLVPTCVKALTDSDFAQVSCAKALTVALTITGVVFTIGSKEHGQLGSHRLDDSS 530

Query: 414 VSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 463
           +        +   L+   V +IS+G  H  V+T  G++F +G     QLG
Sbjct: 531 ICS------VEGPLKTEFVREISSGSSHVAVLTMNGKVFTWGKGTEGQLG 574



 Score = 94.7 bits (234), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 70/221 (31%), Positives = 111/221 (50%), Gaps = 18/221 (8%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           VV+++  + H A +  SGQ+FT GD +    GH DT+  + RP+ VE+LKG+  K V  G
Sbjct: 377 VVKMACGQWHTAIISSSGQLFTYGDGTFGVLGHGDTS-SVARPKEVESLKGLRVKAVACG 435

Query: 225 LNFTGFL-----TIR-----GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQI 274
              T  +     T++     G + T G    G+LGH D   +  P  +  L +     Q+
Sbjct: 436 PWHTAAIVEILGTVKSNAPSGKLFTWGDADRGKLGHSDKESKLVPTCVKALTD-SDFAQV 494

Query: 275 AAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFR--RKGIHVVRVSAGD 332
           +   +  +A+T  GVV++ GS  +  LG     D     +I +     K   V  +S+G 
Sbjct: 495 SCAKALTVALTITGVVFTIGSKEHGQLGSHRLDDS----SICSVEGPLKTEFVREISSGS 550

Query: 333 EHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
            HV  L  +G V+TWGKG  G LG G+ +D++ P  + +L+
Sbjct: 551 SHVAVLTMNGKVFTWGKGTEGQLGLGNYVDRSSPTLVEALE 591



 Score = 89.7 bits (221), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 83/308 (26%), Positives = 136/308 (44%), Gaps = 17/308 (5%)

Query: 173 NHAAFVLQS-GQVFTCGDNSSFCCGHRDTNRP-IFRPRLVEALKGVPCKQVTAGLNFTGF 230
           +H A+   S   +F  GD        RDT++  +  PRL+ + + +  + V+ G      
Sbjct: 223 SHVAYGTDSLKDIFVWGDVLGSVLDDRDTSKANVSLPRLLNSTQILDVQNVSCGEKHAAI 282

Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 290
           +T +G V + G    G+LGH  ++    PK I  L     V  IA G  +  A+  +G +
Sbjct: 283 VTKQGEVFSWGKEDGGRLGHKVSVGVLHPKIIESLA-FTHVKAIAFGAKHTCALAISGEL 341

Query: 291 YSFGSGSNFCLGHGEQHDELQPRAIQTF-RRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 349
           + +G G++      +Q    Q    + F   +G+ VV+++ G  H   + SSG ++T+G 
Sbjct: 342 FEWGEGTHSLGVWDDQCQRSQWYPHKLFGPLEGVSVVKMACGQWHTAIISSSGQLFTYGD 401

Query: 350 GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVD----------TGSVYGF 399
           G  G LGHGD      P+ + SLK      V      T  +V+          +G ++ +
Sbjct: 402 GTFGVLGHGDTSSVARPKEVESLKGLRVKAVACGPWHTAAIVEILGTVKSNAPSGKLFTW 461

Query: 400 GWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNER 459
           G    G LG  D+   +  L P  + +L     +Q+S     TV +T  G +F  G  E 
Sbjct: 462 GDADRGKLGHSDK---ESKLVPTCVKALTDSDFAQVSCAKALTVALTITGVVFTIGSKEH 518

Query: 460 AQLGHDTL 467
            QLG   L
Sbjct: 519 GQLGSHRL 526



 Score = 82.4 bits (202), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 71/236 (30%), Positives = 108/236 (45%), Gaps = 16/236 (6%)

Query: 114 MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +++  G++HT +IS+S  +F+ G    GVLGHG +T+       +       V  V+   
Sbjct: 378 VKMACGQWHTAIISSSGQLFTYGDGTFGVLGHG-DTSSVARPKEVESLKGLRVKAVACGP 436

Query: 173 NHAAFVLQ----------SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 222
            H A +++          SG++FT GD      GH D    +  P  V+AL      QV+
Sbjct: 437 WHTAAIVEILGTVKSNAPSGKLFTWGDADRGKLGHSDKESKLV-PTCVKALTDSDFAQVS 495

Query: 223 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 282
                T  LTI G V T GS  HGQLG     D        PL +   V +I++G S++ 
Sbjct: 496 CAKALTVALTITGVVFTIGSKEHGQLGSHRLDDSSICSVEGPL-KTEFVREISSGSSHVA 554

Query: 283 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
            +T NG V+++G G+   LG G   D   P  ++    K   V  ++ G    VA+
Sbjct: 555 VLTMNGKVFTWGKGTEGQLGLGNYVDRSSPTLVEALEDK--QVDSIACGSNFTVAV 608



 Score = 78.6 bits (192), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 67/248 (27%), Positives = 110/248 (44%), Gaps = 29/248 (11%)

Query: 251 GDTL-----DRPTPKSIAPLEEVGSVVQI------AAGPSYMLAVTGNGVVYSFGSGSNF 299
           GD L     DR T K+   L  + +  QI      + G  +   VT  G V+S+G     
Sbjct: 239 GDVLGSVLDDRDTSKANVSLPRLLNSTQILDVQNVSCGEKHAAIVTKQGEVFSWGKEDGG 298

Query: 300 CLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGD 359
            LGH      L P+ I++      HV  ++ G +H  AL  SG ++ WG+G        D
Sbjct: 299 RLGHKVSVGVLHPKIIESL--AFTHVKAIAFGAKHTCALAISGELFEWGEGTHSLGVWDD 356

Query: 360 EIDKTLPEP---LSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSD 416
           +  ++   P      L+    V++   +  T ++  +G ++ +G   FG LG  D   + 
Sbjct: 357 QCQRSQWYPHKLFGPLEGVSVVKMACGQWHTAIISSSGQLFTYGDGTFGVLGHGD---TS 413

Query: 417 KVLRPRILDSLRAHHVSQISTGLYHTVVVTD----------RGRLFGFGDNERAQLGHDT 466
            V RP+ ++SL+   V  ++ G +HT  + +           G+LF +GD +R +LGH  
Sbjct: 414 SVARPKEVESLKGLRVKAVACGPWHTAAIVEILGTVKSNAPSGKLFTWGDADRGKLGHSD 473

Query: 467 LRGCLEPT 474
               L PT
Sbjct: 474 KESKLVPT 481



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 42/155 (27%), Positives = 69/155 (44%), Gaps = 2/155 (1%)

Query: 323 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCA 382
           + V  VS G++H   +   G V++WGK   G LGH   +    P+ + SL       +  
Sbjct: 268 LDVQNVSCGEKHAAIVTKQGEVFSWGKEDGGRLGHKVSVGVLHPKIIESLAFTHVKAIAF 327

Query: 383 RKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRP-RILDSLRAHHVSQISTGLYH 441
             + T  L  +G ++ +G  G  SLG  D         P ++   L    V +++ G +H
Sbjct: 328 GAKHTCALAISGELFEWG-EGTHSLGVWDDQCQRSQWYPHKLFGPLEGVSVVKMACGQWH 386

Query: 442 TVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 476
           T +++  G+LF +GD     LGH        P E+
Sbjct: 387 TAIISSSGQLFTYGDGTFGVLGHGDTSSVARPKEV 421


>gi|198471444|ref|XP_001355626.2| GA11166 [Drosophila pseudoobscura pseudoobscura]
 gi|198145920|gb|EAL32685.2| GA11166 [Drosophila pseudoobscura pseudoobscura]
          Length = 5072

 Score =  122 bits (305), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 99/347 (28%), Positives = 162/347 (46%), Gaps = 8/347 (2%)

Query: 129  SSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCG 188
            S+++  G +  G LG G E ++  + T     S    VQ++  E     V   G++F  G
Sbjct: 4236 STIYGWGHNHRGQLG-GLEGSRIKTPTPCEALSLLRPVQLAGGEQSLFAVTPDGKLFATG 4294

Query: 189  DNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQV--TAGLNFTGFLTIRGHVHTCGSNTHG 246
              S    G    +     P L+ +L+ V  K+V   +G      LT  G V+  G    G
Sbjct: 4295 YGSGGRLGVGGADSWAI-PTLLGSLQHVFVKKVAVNSGGKHCLALTTEGEVYAWGEGEDG 4353

Query: 247  QLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ 306
            +LGHG+ +    PK +  L  + +V  IA G ++  A+T +G V ++G G    LGHG+ 
Sbjct: 4354 KLGHGNRMSYDRPKLVEHLNGM-NVADIACGSAHSAAITASGHVLTWGKGRYGRLGHGDS 4412

Query: 307  HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP 366
             D+L+P+ ++         +   +GD   + ++    V++WG G  G LG G      LP
Sbjct: 4413 EDQLRPQLVEALLGYRAIDIACGSGDAQTLCINDDDNVWSWGDGDYGKLGRGGSDGCKLP 4472

Query: 367  EPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDS 426
              + SL     ++V    + +  L  +G+VY +G   F  LG    G  D V RP+ + +
Sbjct: 4473 YKIESLAGLGVIKVECGSQFSVALTKSGAVYTWGKGDFHRLG---HGSVDHVRRPKKVAA 4529

Query: 427  LRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEP 473
            L+   +  I+TG  H V  +D G ++ +GDN+  QLG  T+     P
Sbjct: 4530 LQGKKIISIATGSLHCVACSDSGEVYTWGDNDEGQLGDGTVTAIQRP 4576



 Score =  121 bits (303), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 97/323 (30%), Positives = 152/323 (47%), Gaps = 16/323 (4%)

Query: 128  NSSVFSCGSSLCGVLGHGPETTQCVSFTR---INFPSAAHVVQVSASENHAAFVLQSGQV 184
            N  V++CG    G LG G   T  V       +        V V +   HA  +   G+V
Sbjct: 3146 NGKVYACGEGTNGRLGLG--VTHNVPLPHQLPVLHQYVVKKVAVHSGGKHALALTLDGKV 3203

Query: 185  FTCGDNSSFCCGHRDTNRPIF-RPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 243
            F+ G+      GH   NR    +PRLVE L+    + V  G + +  ++ +G ++T G  
Sbjct: 3204 FSWGEGEDGKLGH--GNRTTLDKPRLVETLRSKKIRDVACGSSHSAAISSQGELYTWGLG 3261

Query: 244  THGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGP--SYMLAVTGNGVVYSFGSGSNFCL 301
             +G+LGHGD   +  PK +A L     V+Q+A G   +  LA+T +G V+S+G G    L
Sbjct: 3262 EYGRLGHGDNSTQLKPKLVAALAG-RRVIQVACGSRDAQTLALTEDGAVFSWGDGDFGKL 3320

Query: 302  GHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEI 361
            G G       P  I+  R  GI V+++  G +  +AL  +G V+TWGKG    LGHG + 
Sbjct: 3321 GRGGSEGSDTPHEIE--RLSGIGVIQIECGAQFSLALTRAGEVWTWGKGDYYRLGHGGDQ 3378

Query: 362  DKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRP 421
                P+P++ L+    + V         + D G VY +G    G  G  +  V+ K   P
Sbjct: 3379 HVRKPQPIAGLRGRRVIHVAVGALHCLAVTDAGQVYAWGDNDHGQQGSGNTFVNKK---P 3435

Query: 422  RILDSLRAHHVSQISTGLYHTVV 444
             ++  L A  V++++ G  H++ 
Sbjct: 3436 ALVIGLDAVFVNRVACGSSHSIA 3458



 Score =  118 bits (296), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 83/283 (29%), Positives = 137/283 (48%), Gaps = 9/283 (3%)

Query: 166  VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIF-RPRLVEALKGVPCKQVTAG 224
            V V++   H   +   G+V+  G+      GH   NR  + RP+LVE L G+    +  G
Sbjct: 4326 VAVNSGGKHCLALTTEGEVYAWGEGEDGKLGH--GNRMSYDRPKLVEHLNGMNVADIACG 4383

Query: 225  LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSV-VQIAAGPSYMLA 283
               +  +T  GHV T G   +G+LGHGD+ D+  P+ +  L    ++ +   +G +  L 
Sbjct: 4384 SAHSAAITASGHVLTWGKGRYGRLGHGDSEDQLRPQLVEALLGYRAIDIACGSGDAQTLC 4443

Query: 284  VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 343
            +  +  V+S+G G    LG G       P  I++    G+ V++V  G +  VAL  SG 
Sbjct: 4444 INDDDNVWSWGDGDYGKLGRGGSDGCKLPYKIESL--AGLGVIKVECGSQFSVALTKSGA 4501

Query: 344  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 403
            VYTWGKG    LGHG       P+ +++L+    + +           D+G VY +G   
Sbjct: 4502 VYTWGKGDFHRLGHGSVDHVRRPKKVAALQGKKIISIATGSLHCVACSDSGEVYTWGDND 4561

Query: 404  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT 446
             G LG    G    + RPR++ +L+  H+ +++ G  HT+ ++
Sbjct: 4562 EGQLG---DGTVTAIQRPRLVAALQGKHIVKVTCGSAHTLALS 4601



 Score =  112 bits (279), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 85/294 (28%), Positives = 139/294 (47%), Gaps = 17/294 (5%)

Query: 177  FVLQSGQVFTCGDNSSFCCGHRDT-NRPIFRPRLVEALKGVPCKQVT--AGLNFTGFLTI 233
             V Q+G+V+ CG+ ++   G   T N P+  P  +  L     K+V   +G      LT+
Sbjct: 3142 IVGQNGKVYACGEGTNGRLGLGVTHNVPL--PHQLPVLHQYVVKKVAVHSGGKHALALTL 3199

Query: 234  RGHVHTCGSNTHGQLGHGD--TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
             G V + G    G+LGHG+  TLD+P    +        +  +A G S+  A++  G +Y
Sbjct: 3200 DGKVFSWGEGEDGKLGHGNRTTLDKP---RLVETLRSKKIRDVACGSSHSAAISSQGELY 3256

Query: 292  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEHVVALDSSGYVYTWGK 349
            ++G G    LGHG+   +L+P+ +      G  V++V+ G  D   +AL   G V++WG 
Sbjct: 3257 TWGLGEYGRLGHGDNSTQLKPKLVAAL--AGRRVIQVACGSRDAQTLALTEDGAVFSWGD 3314

Query: 350  GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGF 409
            G  G LG G       P  +  L     +Q+    + +  L   G V+ +G   +  LG 
Sbjct: 3315 GDFGKLGRGGSEGSDTPHEIERLSGIGVIQIECGAQFSLALTRAGEVWTWGKGDYYRLG- 3373

Query: 410  PDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 463
               G    V +P+ +  LR   V  ++ G  H + VTD G+++ +GDN+  Q G
Sbjct: 3374 --HGGDQHVRKPQPIAGLRGRRVIHVAVGALHCLAVTDAGQVYAWGDNDHGQQG 3425



 Score = 99.0 bits (245), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 81/251 (32%), Positives = 116/251 (46%), Gaps = 9/251 (3%)

Query: 119  GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSASENHAAF 177
            G++   L  +  VFS G    G LGHG  TT  +   R +    +  +  V+   +H+A 
Sbjct: 3191 GKHALALTLDGKVFSWGEGEDGKLGHGNRTT--LDKPRLVETLRSKKIRDVACGSSHSAA 3248

Query: 178  VLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN--FTGFLTIRG 235
            +   G+++T G       GH D N    +P+LV AL G    QV  G     T  LT  G
Sbjct: 3249 ISSQGELYTWGLGEYGRLGHGD-NSTQLKPKLVAALAGRRVIQVACGSRDAQTLALTEDG 3307

Query: 236  HVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 295
             V + G    G+LG G +    TP  I  L  +G V+QI  G  + LA+T  G V+++G 
Sbjct: 3308 AVFSWGDGDFGKLGRGGSEGSDTPHEIERLSGIG-VIQIECGAQFSLALTRAGEVWTWGK 3366

Query: 296  GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGAL 355
            G  + LGHG      +P+ I   R  G  V+ V+ G  H +A+  +G VY WG    G  
Sbjct: 3367 GDYYRLGHGGDQHVRKPQPIAGLR--GRRVIHVAVGALHCLAVTDAGQVYAWGDNDHGQQ 3424

Query: 356  GHGDEIDKTLP 366
            G G+      P
Sbjct: 3425 GSGNTFVNKKP 3435



 Score = 96.7 bits (239), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 81/284 (28%), Positives = 128/284 (45%), Gaps = 14/284 (4%)

Query: 113  NMQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTR---INFPSAAHVVQV 168
             + + +G  H L L +   V++ G    G LGHG      +S+ R   +   +  +V  +
Sbjct: 4325 KVAVNSGGKHCLALTTEGEVYAWGEGEDGKLGHGNR----MSYDRPKLVEHLNGMNVADI 4380

Query: 169  SASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFT 228
            +    H+A +  SG V T G       GH D+   + RP+LVEAL G     +  G    
Sbjct: 4381 ACGSAHSAAITASGHVLTWGKGRYGRLGHGDSEDQL-RPQLVEALLGYRAIDIACGSGDA 4439

Query: 229  GFLTIRG--HVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTG 286
              L I    +V + G   +G+LG G +     P  I  L  +G V+++  G  + +A+T 
Sbjct: 4440 QTLCINDDDNVWSWGDGDYGKLGRGGSDGCKLPYKIESLAGLG-VIKVECGSQFSVALTK 4498

Query: 287  NGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYT 346
            +G VY++G G    LGHG      +P+ +     +G  ++ ++ G  H VA   SG VYT
Sbjct: 4499 SGAVYTWGKGDFHRLGHGSVDHVRRPKKVAAL--QGKKIISIATGSLHCVACSDSGEVYT 4556

Query: 347  WGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVL 390
            WG    G LG G       P  +++L+    V+V      T  L
Sbjct: 4557 WGDNDEGQLGDGTVTAIQRPRLVAALQGKHIVKVTCGSAHTLAL 4600



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 70/263 (26%), Positives = 120/263 (45%), Gaps = 7/263 (2%)

Query: 202 RPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTP 259
           +P   P+L+E +       + +      F+ I    + ++ G+    +LGHGDT  R  P
Sbjct: 604 KPETEPQLLEEIAHETIVSIASHCEGRHFMAIDINRNAYSWGNGEDHRLGHGDTHARAVP 663

Query: 260 KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFR 319
             I  L+    V  +  G SY  A+T +G +Y++G G+   LGHG   D+  P  +    
Sbjct: 664 TKITLLDRC--VKAVFCGCSYSAAITCSGNLYTWGRGTYARLGHGNSDDQPLPTVVMALT 721

Query: 320 RKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQ 379
              I  V + +GD H + L S G+VY WG    G LG+G+      P  + SL      +
Sbjct: 722 EHEIIDVALGSGDAHSLCLTSEGHVYAWGDADYGKLGNGNLNGSMSPVLVESLPK--VQR 779

Query: 380 VCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGL 439
           V A  + +  L   G +Y +G          +R  +     PR++  L+   +  ++ G+
Sbjct: 780 VFAGAQFSMALTTDGQLYSWGKASCLGHQLVERS-AQWCSVPRLISGLQHKRIVDVAVGV 838

Query: 440 YHTVVVTDRGRLFGFGDNERAQL 462
            H + ++  G +FG+G N+  Q+
Sbjct: 839 AHCLALSSCGEVFGWGRNDSQQI 861



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 72/245 (29%), Positives = 113/245 (46%), Gaps = 12/245 (4%)

Query: 237  VHTCGSNTHGQLG--HGDTLDRPT-PKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
            V   G N   QLG   G  +  PT  ++I+ L  +     IA G   +  V  NG VY+ 
Sbjct: 3097 VMVWGLNDKEQLGGLKGSKVKVPTFSQTISRLRPI----HIAGGSKSLFIVGQNGKVYAC 3152

Query: 294  GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 353
            G G+N  LG G  H+   P  +    +  +  V V +G +H +AL   G V++WG+G  G
Sbjct: 3153 GEGTNGRLGLGVTHNVPLPHQLPVLHQYVVKKVAVHSGGKHALALTLDGKVFSWGEGEDG 3212

Query: 354  ALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRG 413
             LGHG+      P  + +L+S     V      +  +   G +Y +G   +G LG  D  
Sbjct: 3213 KLGHGNRTTLDKPRLVETLRSKKIRDVACGSSHSAAISSQGELYTWGLGEYGRLGHGDNS 3272

Query: 414  VSDKVLRPRILDSLRAHHVSQISTGLY--HTVVVTDRGRLFGFGDNERAQLGHDTLRGCL 471
                 L+P+++ +L    V Q++ G     T+ +T+ G +F +GD +  +LG     G  
Sbjct: 3273 TQ---LKPKLVAALAGRRVIQVACGSRDAQTLALTEDGAVFSWGDGDFGKLGRGGSEGSD 3329

Query: 472  EPTEI 476
             P EI
Sbjct: 3330 TPHEI 3334



 Score = 85.9 bits (211), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 74/258 (28%), Positives = 124/258 (48%), Gaps = 16/258 (6%)

Query: 224  GLNFTGFLTIRGHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSY 280
             L++ G  TI G     G N  GQLG   G  +  PTP ++++ L  V    Q+A G   
Sbjct: 4229 ALSWGGASTIYG----WGHNHRGQLGGLEGSRIKTPTPCEALSLLRPV----QLAGGEQS 4280

Query: 281  MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 340
            + AVT +G +++ G GS   LG G       P  + + +   +  V V++G +H +AL +
Sbjct: 4281 LFAVTPDGKLFATGYGSGGRLGVGGADSWAIPTLLGSLQHVFVKKVAVNSGGKHCLALTT 4340

Query: 341  SGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 400
             G VY WG+G  G LGHG+ +    P+ +  L       +      +  +  +G V  +G
Sbjct: 4341 EGEVYAWGEGEDGKLGHGNRMSYDRPKLVEHLNGMNVADIACGSAHSAAITASGHVLTWG 4400

Query: 401  WMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDNE 458
               +G LG  D   S+  LRP+++++L  +    I+  +G   T+ + D   ++ +GD +
Sbjct: 4401 KGRYGRLGHGD---SEDQLRPQLVEALLGYRAIDIACGSGDAQTLCINDDDNVWSWGDGD 4457

Query: 459  RAQLGHDTLRGCLEPTEI 476
              +LG     GC  P +I
Sbjct: 4458 YGKLGRGGSDGCKLPYKI 4475



 Score = 64.3 bits (155), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 51/217 (23%), Positives = 97/217 (44%), Gaps = 16/217 (7%)

Query: 259 PKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTF 318
           P S+  L     V QI    S +L ++ +G +Y++     F         E +P+ ++  
Sbjct: 566 PSSLPLLNCKFQVQQIVCSESIVLILSEDGKLYNW---RMF-------KPETEPQLLEEI 615

Query: 319 RRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAV 378
             + I  +       H +A+D +   Y+WG G    LGHGD   + +P  ++ L   +  
Sbjct: 616 AHETIVSIASHCEGRHFMAIDINRNAYSWGNGEDHRLGHGDTHARAVPTKITLLDRCVKA 675

Query: 379 QVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS-- 436
             C       +   +G++Y +G   +  LG    G SD    P ++ +L  H +  ++  
Sbjct: 676 VFCGCSYSAAITC-SGNLYTWGRGTYARLG---HGNSDDQPLPTVVMALTEHEIIDVALG 731

Query: 437 TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEP 473
           +G  H++ +T  G ++ +GD +  +LG+  L G + P
Sbjct: 732 SGDAHSLCLTSEGHVYAWGDADYGKLGNGNLNGSMSP 768



 Score = 43.9 bits (102), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 34/135 (25%), Positives = 63/135 (46%), Gaps = 5/135 (3%)

Query: 332  DEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 391
            D+  ++   +  +Y WG  + G LG  +      P P  +L     VQ+   ++  F + 
Sbjct: 4226 DDWALSWGGASTIYGWGHNHRGQLGGLEGSRIKTPTPCEALSLLRPVQLAGGEQSLFAVT 4285

Query: 392  DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRG 449
              G ++     G+GS G    G +D    P +L SL+   V +++  +G  H + +T  G
Sbjct: 4286 PDGKLFA---TGYGSGGRLGVGGADSWAIPTLLGSLQHVFVKKVAVNSGGKHCLALTTEG 4342

Query: 450  RLFGFGDNERAQLGH 464
             ++ +G+ E  +LGH
Sbjct: 4343 EVYAWGEGEDGKLGH 4357


>gi|440801355|gb|ELR22375.1| regulator of chromosome condensation, RCC1, putative [Acanthamoeba
           castellanii str. Neff]
          Length = 395

 Score =  122 bits (305), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 100/306 (32%), Positives = 146/306 (47%), Gaps = 25/306 (8%)

Query: 188 GDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQ 247
           G + S   G   T   +  P  + AL+      V+AG + +  LT  G V + G+  HG+
Sbjct: 11  GQHGSLGQGDAVTQLSVLTP--IRALEAHRVVAVSAGGHHSLVLTEEGRVFSFGNGLHGR 68

Query: 248 LGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH 307
           LGHG+      P+ IA  +    V +I+AG ++ LA+T +G  YSFG G    LGHG++ 
Sbjct: 69  LGHGNEETCFEPRRIAFFDTTAGVAKISAGTTHSLALTKDGKAYSFGFGMFGRLGHGDET 128

Query: 308 DELQPRAIQTFRRKGIH---------------VVRVSAGDEHVVALDSSGYVYTWGKGYC 352
           D+L PR I T R  G                 +  V+AG  H + L + G VY++G G  
Sbjct: 129 DQLLPREI-TLRGHGASPPVGDRVEENETDPVIEHVAAGYFHSLLLTTDGRVYSFGAGVM 187

Query: 353 GALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDR 412
           GALGHGD   +  P  + +L     V +      T VL D G V+ FG + +        
Sbjct: 188 GALGHGDRDKRLRPTMIEALADRRIVSMACGSANTLVLDDEGRVFFFG-LDYSEFPKFTE 246

Query: 413 GVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRL--FGFGDNERAQLGHDTLRGC 470
           G +  VL P  L    A  ++++  G  H +++T  G+L  FG G N R  LG +T R  
Sbjct: 247 GQARFVLLPSALG--LAEEITEVRAGEGHCLLLTREGKLLAFGLGKNGRLGLGDETNR-- 302

Query: 471 LEPTEI 476
           L PT +
Sbjct: 303 LAPTAV 308



 Score =  118 bits (296), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 83/240 (34%), Positives = 121/240 (50%), Gaps = 22/240 (9%)

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
           +RG V + G   HG LG GD + + +  +     E   VV ++AG  + L +T  G V+S
Sbjct: 1   MRGVVLSAGGGQHGSLGQGDAVTQLSVLTPIRALEAHRVVAVSAGGHHSLVLTEEGRVFS 60

Query: 293 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 352
           FG+G +  LGHG +    +PR I  F      V ++SAG  H +AL   G  Y++G G  
Sbjct: 61  FGNGLHGRLGHGNEETCFEPRRIAFFDTTA-GVAKISAGTTHSLALTKDGKAYSFGFGMF 119

Query: 353 GALGHGDEIDKTLPEPLSSLKSHLAV-----------------QVCARKRKTFVLVDTGS 395
           G LGHGDE D+ LP  + +L+ H A                   V A    + +L   G 
Sbjct: 120 GRLGHGDETDQLLPREI-TLRGHGASPPVGDRVEENETDPVIEHVAAGYFHSLLLTTDGR 178

Query: 396 VYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFG 455
           VY FG    G+LG  DR   DK LRP ++++L    +  ++ G  +T+V+ D GR+F FG
Sbjct: 179 VYSFGAGVMGALGHGDR---DKRLRPTMIEALADRRIVSMACGSANTLVLDDEGRVFFFG 235



 Score = 95.1 bits (235), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 103/371 (27%), Positives = 156/371 (42%), Gaps = 37/371 (9%)

Query: 131 VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDN 190
           V S G    G LG G   TQ    T I    A  VV VSA  +H+  + + G+VF+ G+ 
Sbjct: 5   VLSAGGGQHGSLGQGDAVTQLSVLTPIRALEAHRVVAVSAGGHHSLVLTEEGRVFSFGNG 64

Query: 191 SSFCCGHRDTNRPIFRPRLV---EALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQ 247
                GH +     F PR +   +   GV   +++AG   +  LT  G  ++ G    G+
Sbjct: 65  LHGRLGHGN-EETCFEPRRIAFFDTTAGV--AKISAGTTHSLALTKDGKAYSFGFGMFGR 121

Query: 248 LGHGDTLDRPTPKSIA--------PL------EEVGSVVQ-IAAGPSYMLAVTGNGVVYS 292
           LGHGD  D+  P+ I         P+       E   V++ +AAG  + L +T +G VYS
Sbjct: 122 LGHGDETDQLLPREITLRGHGASPPVGDRVEENETDPVIEHVAAGYFHSLLLTTDGRVYS 181

Query: 293 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 352
           FG+G    LGHG++   L+P  I+    +   +V ++ G  + + LD  G V+ +G  Y 
Sbjct: 182 FGAGVMGALGHGDRDKRLRPTMIEALADR--RIVSMACGSANTLVLDDEGRVFFFGLDYS 239

Query: 353 --GALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFP 410
                  G      LP  L   +     +V A +    +L   G +  FG    G LG  
Sbjct: 240 EFPKFTEGQARFVLLPSALGLAEE--ITEVRAGEGHCLLLTREGKLLAFGLGKNGRLGLG 297

Query: 411 DRGVSDKVLRPRILDSLRAHHVS---QISTGLYHTVVVTD----RGRLFGFGDNERAQLG 463
           D       L P  +        S    I+ G  H + + D      RL+ FG  ++ QL 
Sbjct: 298 DE---TNRLAPTAVTFPSNGTTSVEIDIACGAKHGLALVDVPGEGPRLYAFGSGDQGQLA 354

Query: 464 HDTLRGCLEPT 474
           +   +    PT
Sbjct: 355 NGHRQDRASPT 365



 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 99/363 (27%), Positives = 152/363 (41%), Gaps = 39/363 (10%)

Query: 114 MQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRIN-FPSAAHVVQVSAS 171
           + ++ G +H+L+++    VFS G+ L G LGHG E T C    RI  F + A V ++SA 
Sbjct: 40  VAVSAGGHHSLVLTEEGRVFSFGNGLHGRLGHGNEET-CFEPRRIAFFDTTAGVAKISAG 98

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTN---------------RPIFRPRLVEALKGV 216
             H+  + + G+ ++ G       GH D                  P    R+ E     
Sbjct: 99  TTHSLALTKDGKAYSFGFGMFGRLGHGDETDQLLPREITLRGHGASPPVGDRVEENETDP 158

Query: 217 PCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA 276
             + V AG   +  LT  G V++ G+   G LGHGD   R  P  I  L +   +V +A 
Sbjct: 159 VIEHVAAGYFHSLLLTTDGRVYSFGAGVMGALGHGDRDKRLRPTMIEALADR-RIVSMAC 217

Query: 277 GPSYMLAVTGNGVVYSFG-SGSNFC-LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEH 334
           G +  L +   G V+ FG   S F     G+    L P A+         +  V AG+ H
Sbjct: 218 GSANTLVLDDEGRVFFFGLDYSEFPKFTEGQARFVLLPSALGLAEE----ITEVRAGEGH 273

Query: 335 VVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPL---SSLKSHLAVQVCARKRKTFVLV 391
            + L   G +  +G G  G LG GDE ++  P  +   S+  + + + +    +    LV
Sbjct: 274 CLLLTREGKLLAFGLGKNGRLGLGDETNRLAPTAVTFPSNGTTSVEIDIACGAKHGLALV 333

Query: 392 DTGS----VYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRA---HHV--SQISTGLYHT 442
           D       +Y FG    G L    R   D+        SL A    H+  + IS G  H+
Sbjct: 334 DVPGEGPRLYAFGSGDQGQLANGHR--QDRASPTATTTSLPALLHQHIVPAAISAGKAHS 391

Query: 443 VVV 445
           +V+
Sbjct: 392 LVL 394



 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 42/139 (30%), Positives = 68/139 (48%), Gaps = 3/139 (2%)

Query: 342 GYVYTWGKGYCGALGHGDEIDK-TLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 400
           G V + G G  G+LG GD + + ++  P+ +L++H  V V A    + VL + G V+ FG
Sbjct: 3   GVVLSAGGGQHGSLGQGDAVTQLSVLTPIRALEAHRVVAVSAGGHHSLVLTEEGRVFSFG 62

Query: 401 WMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERA 460
               G LG  +     +  R    D+     V++IS G  H++ +T  G+ + FG     
Sbjct: 63  NGLHGRLGHGNEETCFEPRRIAFFDTTAG--VAKISAGTTHSLALTKDGKAYSFGFGMFG 120

Query: 461 QLGHDTLRGCLEPTEIFIQ 479
           +LGH      L P EI ++
Sbjct: 121 RLGHGDETDQLLPREITLR 139


>gi|255585556|ref|XP_002533468.1| Ran GTPase binding protein, putative [Ricinus communis]
 gi|223526683|gb|EEF28920.1| Ran GTPase binding protein, putative [Ricinus communis]
          Length = 1097

 Score =  122 bits (305), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 101/323 (31%), Positives = 145/323 (44%), Gaps = 20/323 (6%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V Q++    H A V + G+VFT G+ S    GH         PRLVE L       V  G
Sbjct: 267 VQQIACGVRHVALVTRQGEVFTWGEESGGRLGH-GFETDFSCPRLVEFLAVTNVDFVACG 325

Query: 225 LNFTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSYM 281
              T  +T  G ++T G  T   G LG G  +    PK ++ PLE +  V  IA G  + 
Sbjct: 326 EYHTCAVTTSGDLYTWGDGTRNAGLLGQGTDVSHWIPKRVSGPLEGL-QVFSIACGTWHS 384

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD-- 339
              T NG +++FG G+   LGHG++     P+ +Q     G+  ++V+ G  H  A+   
Sbjct: 385 ALATSNGKLFTFGDGAFGVLGHGDRESLSFPKEVQLL--SGLKTIKVACGVWHTAAIVEV 442

Query: 340 --------SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 391
                   SS  ++TWG G    LGHG +    LP  +SSL  +   Q+   +  T  L 
Sbjct: 443 MSQSGANVSSRKLFTWGDGDKNRLGHGSKDTYLLPTCVSSLIDYNFHQIACGQTLTVALT 502

Query: 392 DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRL 451
            +G V+  G    G LG P    SD  +   + DSL    V ++S G +H  V+T R  L
Sbjct: 503 TSGHVFTMGGTAHGQLGNP---ASDGKMPTLVQDSLVGEFVEEVSCGAHHVAVLTSRSEL 559

Query: 452 FGFGDNERAQLGHDTLRGCLEPT 474
           + +G     +LGH        PT
Sbjct: 560 YTWGKGANGRLGHGDTEDRRTPT 582



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 79/281 (28%), Positives = 127/281 (45%), Gaps = 14/281 (4%)

Query: 204 IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 263
           +  P+ +E+   +  +Q+  G+     +T +G V T G  + G+LGHG   D   P+ + 
Sbjct: 253 VLTPKPLESNVVLDVQQIACGVRHVALVTRQGEVFTWGEESGGRLGHGFETDFSCPRLVE 312

Query: 264 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC--LGHGEQHDELQPRAIQTFRRK 321
            L  V +V  +A G  +  AVT +G +Y++G G+     LG G       P+ + +   +
Sbjct: 313 FL-AVTNVDFVACGEYHTCAVTTSGDLYTWGDGTRNAGLLGQGTDVSHWIPKRV-SGPLE 370

Query: 322 GIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVC 381
           G+ V  ++ G  H     S+G ++T+G G  G LGHGD    + P+ +  L     ++V 
Sbjct: 371 GLQVFSIACGTWHSALATSNGKLFTFGDGAFGVLGHGDRESLSFPKEVQLLSGLKTIKVA 430

Query: 382 ARKRKTFVLVDTGSVYG--------FGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVS 433
                T  +V+  S  G        F W G G       G  D  L P  + SL  ++  
Sbjct: 431 CGVWHTAAIVEVMSQSGANVSSRKLFTW-GDGDKNRLGHGSKDTYLLPTCVSSLIDYNFH 489

Query: 434 QISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPT 474
           QI+ G   TV +T  G +F  G     QLG+    G + PT
Sbjct: 490 QIACGQTLTVALTTSGHVFTMGGTAHGQLGNPASDGKM-PT 529



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 78/272 (28%), Positives = 123/272 (45%), Gaps = 19/272 (6%)

Query: 116 ITTGRYHTLLISNSS---VFSCGSSLCGVLGHGPETTQCVSFTRINFP-SAAHVVQVSAS 171
           +  G YHT  ++ S     +  G+   G+LG G + +  +   R++ P     V  ++  
Sbjct: 322 VACGEYHTCAVTTSGDLYTWGDGTRNAGLLGQGTDVSHWIP-KRVSGPLEGLQVFSIACG 380

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG------- 224
             H+A    +G++FT GD +    GH D     F P+ V+ L G+   +V  G       
Sbjct: 381 TWHSALATSNGKLFTFGDGAFGVLGHGDRESLSF-PKEVQLLSGLKTIKVACGVWHTAAI 439

Query: 225 ---LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 281
              ++ +G       + T G     +LGHG       P  ++ L +  +  QIA G +  
Sbjct: 440 VEVMSQSGANVSSRKLFTWGDGDKNRLGHGSKDTYLLPTCVSSLIDY-NFHQIACGQTLT 498

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 341
           +A+T +G V++ G  ++  LG+    D   P  +Q     G  V  VS G  HV  L S 
Sbjct: 499 VALTTSGHVFTMGGTAHGQLGN-PASDGKMPTLVQD-SLVGEFVEEVSCGAHHVAVLTSR 556

Query: 342 GYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
             +YTWGKG  G LGHGD  D+  P  + +LK
Sbjct: 557 SELYTWGKGANGRLGHGDTEDRRTPTLVEALK 588



 Score = 77.4 bits (189), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 70/238 (29%), Positives = 110/238 (46%), Gaps = 24/238 (10%)

Query: 116 ITTGRYHTLL-ISNSSVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSASEN 173
           I  G +H+ L  SN  +F+ G    GVLGHG    + +SF + +   S    ++V+    
Sbjct: 377 IACGTWHSALATSNGKLFTFGDGAFGVLGHGDR--ESLSFPKEVQLLSGLKTIKVACGVW 434

Query: 174 HAAFVL----QSG------QVFTCGDNSSFCCGH--RDTNRPIFRPRLVEALKGVPCKQV 221
           H A ++    QSG      ++FT GD      GH  +DT      P  V +L      Q+
Sbjct: 435 HTAAIVEVMSQSGANVSSRKLFTWGDGDKNRLGHGSKDT---YLLPTCVSSLIDYNFHQI 491

Query: 222 TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ-IAAGPSY 280
             G   T  LT  GHV T G   HGQLG+  + D   P ++     VG  V+ ++ G  +
Sbjct: 492 ACGQTLTVALTTSGHVFTMGGTAHGQLGNPAS-DGKMP-TLVQDSLVGEFVEEVSCGAHH 549

Query: 281 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
           +  +T    +Y++G G+N  LGHG+  D   P  ++  + +  HV  +S G     ++
Sbjct: 550 VAVLTSRSELYTWGKGANGRLGHGDTEDRRTPTLVEALKDR--HVKNISCGSNFTTSI 605



 Score = 62.8 bits (151), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 54/201 (26%), Positives = 88/201 (43%), Gaps = 8/201 (3%)

Query: 277 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVV 336
           G  Y+     +  V+  GS S+  +    ++D L P+ +++     + V +++ G  HV 
Sbjct: 225 GDVYLWGEVWSDAVFPDGSMSSVPI----KNDVLTPKPLES--NVVLDVQQIACGVRHVA 278

Query: 337 ALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSV 396
            +   G V+TWG+   G LGHG E D + P  +  L       V   +  T  +  +G +
Sbjct: 279 LVTRQGEVFTWGEESGGRLGHGFETDFSCPRLVEFLAVTNVDFVACGEYHTCAVTTSGDL 338

Query: 397 YGFGWMGFGSLGFPDRGVSDKVLRP-RILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFG 455
           Y +G  G  + G   +G       P R+   L    V  I+ G +H+ + T  G+LF FG
Sbjct: 339 YTWG-DGTRNAGLLGQGTDVSHWIPKRVSGPLEGLQVFSIACGTWHSALATSNGKLFTFG 397

Query: 456 DNERAQLGHDTLRGCLEPTEI 476
           D     LGH        P E+
Sbjct: 398 DGAFGVLGHGDRESLSFPKEV 418


>gi|195399111|ref|XP_002058164.1| GJ15642 [Drosophila virilis]
 gi|194150588|gb|EDW66272.1| GJ15642 [Drosophila virilis]
          Length = 5062

 Score =  122 bits (305), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 99/347 (28%), Positives = 162/347 (46%), Gaps = 8/347 (2%)

Query: 129  SSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCG 188
            S+++  G +  G LG G E ++  + T     S    +Q++  E     V   G++F  G
Sbjct: 4199 STIYGWGHNHRGQLG-GLEGSRIKTPTPCEALSLLRPIQLAGGEQSLFAVTPDGKLFATG 4257

Query: 189  DNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQV--TAGLNFTGFLTIRGHVHTCGSNTHG 246
              S    G   ++     P L+ +L+ V  K+V   +G      LT  G V+  G    G
Sbjct: 4258 YGSGGRLGVGGSDSWAI-PTLLGSLQHVFVKKVAVNSGGKHCLALTTDGEVYAWGEGEDG 4316

Query: 247  QLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ 306
            +LGHG+ +    PK +  L  + SV  IA G ++  A+T +G V ++G G    LGHG+ 
Sbjct: 4317 KLGHGNRMSYDRPKLLEHLNGM-SVADIACGSAHSAAITASGHVLTWGKGRYGRLGHGDS 4375

Query: 307  HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP 366
             D+L+P+ ++         +   +GD   + +     V++WG G  G LG G      LP
Sbjct: 4376 EDQLRPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKLP 4435

Query: 367  EPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDS 426
              + SL     ++V    + +  L  +G+VY +G   F  LG    G  D V RP+ + +
Sbjct: 4436 YKIESLAGLGVIKVECGSQFSVALTKSGAVYTWGKGDFHRLG---HGSVDHVRRPKKVAA 4492

Query: 427  LRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEP 473
            L+   +  I+TG  H V  +D G ++ +GDN+  QLG  T+     P
Sbjct: 4493 LQGKKIISIATGSLHCVACSDAGEVYTWGDNDEGQLGDGTVTAIQRP 4539



 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 84/283 (29%), Positives = 137/283 (48%), Gaps = 9/283 (3%)

Query: 166  VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIF-RPRLVEALKGVPCKQVTAG 224
            V V++   H   +   G+V+  G+      GH   NR  + RP+L+E L G+    +  G
Sbjct: 4289 VAVNSGGKHCLALTTDGEVYAWGEGEDGKLGH--GNRMSYDRPKLLEHLNGMSVADIACG 4346

Query: 225  LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSV-VQIAAGPSYMLA 283
               +  +T  GHV T G   +G+LGHGD+ D+  PK +  L    ++ +   +G +  L 
Sbjct: 4347 SAHSAAITASGHVLTWGKGRYGRLGHGDSEDQLRPKLVEALLGYRAIDIACGSGDAQTLC 4406

Query: 284  VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 343
            +T +  V+S+G G    LG G       P  I++    G+ V++V  G +  VAL  SG 
Sbjct: 4407 ITDDDNVWSWGDGDYGKLGRGGSDGCKLPYKIESL--AGLGVIKVECGSQFSVALTKSGA 4464

Query: 344  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 403
            VYTWGKG    LGHG       P+ +++L+    + +           D G VY +G   
Sbjct: 4465 VYTWGKGDFHRLGHGSVDHVRRPKKVAALQGKKIISIATGSLHCVACSDAGEVYTWGDND 4524

Query: 404  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT 446
             G LG    G    + RPR++ +L+  H+ +++ G  HT+ ++
Sbjct: 4525 EGQLG---DGTVTAIQRPRLVAALQGKHIVKVTCGSAHTLALS 4564



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 93/322 (28%), Positives = 153/322 (47%), Gaps = 14/322 (4%)

Query: 128  NSSVFSCGSSLCGVLGHGPETTQCVSFTR---INFPSAAHVVQVSASENHAAFVLQSGQV 184
            +  V++CG    G LG G   T  V       +        V V +   HA  +   G+V
Sbjct: 3096 DGKVYACGEGTNGRLGLG--VTHNVPLPHQLPVLHQYVVKKVAVHSGGKHALALTLDGKV 3153

Query: 185  FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNT 244
            F+ G+      GH + +  + +PRLVEAL+    + +  G + +  ++ +G ++T G   
Sbjct: 3154 FSWGEGEDGKLGHGNRST-LDKPRLVEALRAKKIRDIACGSSHSAAISSQGELYTWGLGE 3212

Query: 245  HGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGP--SYMLAVTGNGVVYSFGSGSNFCLG 302
            +G+LGHGD   +  PK +  L     V+Q+A G   +  LA+T +G V+S+G G    LG
Sbjct: 3213 YGRLGHGDNATQLKPKLVTALHG-RRVIQVACGSRDAQTLALTEDGAVFSWGDGDFGKLG 3271

Query: 303  HGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEID 362
             G       P  I+  R  GI V+++  G +  +AL  +G V+TWGKG    LGHG +  
Sbjct: 3272 RGGSEGSATPHEIE--RLSGIGVIQIECGAQFSLALTRAGEVWTWGKGDYYRLGHGGDQH 3329

Query: 363  KTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPR 422
               P+P++ L+    + V         + D G VY +G    G  G  +  V+ K   P 
Sbjct: 3330 VRKPQPIAGLRGRRVIHVAVGALHCLAVTDAGQVYAWGDNDHGQQGSGNTFVNKK---PA 3386

Query: 423  ILDSLRAHHVSQISTGLYHTVV 444
            ++  L A  V++++ G  H++ 
Sbjct: 3387 LVIGLDAVFVNRVACGSSHSMA 3408



 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 86/293 (29%), Positives = 138/293 (47%), Gaps = 17/293 (5%)

Query: 178  VLQSGQVFTCGDNSSFCCGHRDT-NRPIFRPRLVEALKGVPCKQVT--AGLNFTGFLTIR 234
            V Q G+V+ CG+ ++   G   T N P+  P  +  L     K+V   +G      LT+ 
Sbjct: 3093 VSQDGKVYACGEGTNGRLGLGVTHNVPL--PHQLPVLHQYVVKKVAVHSGGKHALALTLD 3150

Query: 235  GHVHTCGSNTHGQLGHGD--TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
            G V + G    G+LGHG+  TLD+P    +        +  IA G S+  A++  G +Y+
Sbjct: 3151 GKVFSWGEGEDGKLGHGNRSTLDKP---RLVEALRAKKIRDIACGSSHSAAISSQGELYT 3207

Query: 293  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEHVVALDSSGYVYTWGKG 350
            +G G    LGHG+   +L+P+ +      G  V++V+ G  D   +AL   G V++WG G
Sbjct: 3208 WGLGEYGRLGHGDNATQLKPKLVTALH--GRRVIQVACGSRDAQTLALTEDGAVFSWGDG 3265

Query: 351  YCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFP 410
              G LG G       P  +  L     +Q+    + +  L   G V+ +G   +  LG  
Sbjct: 3266 DFGKLGRGGSEGSATPHEIERLSGIGVIQIECGAQFSLALTRAGEVWTWGKGDYYRLG-- 3323

Query: 411  DRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 463
              G    V +P+ +  LR   V  ++ G  H + VTD G+++ +GDN+  Q G
Sbjct: 3324 -HGGDQHVRKPQPIAGLRGRRVIHVAVGALHCLAVTDAGQVYAWGDNDHGQQG 3375



 Score = 95.5 bits (236), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 80/284 (28%), Positives = 128/284 (45%), Gaps = 14/284 (4%)

Query: 113  NMQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTR---INFPSAAHVVQV 168
             + + +G  H L L ++  V++ G    G LGHG      +S+ R   +   +   V  +
Sbjct: 4288 KVAVNSGGKHCLALTTDGEVYAWGEGEDGKLGHGNR----MSYDRPKLLEHLNGMSVADI 4343

Query: 169  SASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFT 228
            +    H+A +  SG V T G       GH D+   + RP+LVEAL G     +  G    
Sbjct: 4344 ACGSAHSAAITASGHVLTWGKGRYGRLGHGDSEDQL-RPKLVEALLGYRAIDIACGSGDA 4402

Query: 229  GFLTIRG--HVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTG 286
              L I    +V + G   +G+LG G +     P  I  L  +G V+++  G  + +A+T 
Sbjct: 4403 QTLCITDDDNVWSWGDGDYGKLGRGGSDGCKLPYKIESLAGLG-VIKVECGSQFSVALTK 4461

Query: 287  NGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYT 346
            +G VY++G G    LGHG      +P+ +     +G  ++ ++ G  H VA   +G VYT
Sbjct: 4462 SGAVYTWGKGDFHRLGHGSVDHVRRPKKVAAL--QGKKIISIATGSLHCVACSDAGEVYT 4519

Query: 347  WGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVL 390
            WG    G LG G       P  +++L+    V+V      T  L
Sbjct: 4520 WGDNDEGQLGDGTVTAIQRPRLVAALQGKHIVKVTCGSAHTLAL 4563



 Score = 95.5 bits (236), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 80/314 (25%), Positives = 138/314 (43%), Gaps = 22/314 (7%)

Query: 164 HVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTA 223
            + QV+ SE+    + Q G+++           +    +P   P+L++  +      V+ 
Sbjct: 572 QLKQVACSEDMVVLLCQEGKLY-----------NWPIAKPETEPQLLDFAEIANETFVSI 620

Query: 224 GLNFTG--FLTIRGH--VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPS 279
             +  G  FL +  +   ++ G     +LGHGD   R  P  I  L  V  V  +  G S
Sbjct: 621 AAHCEGRHFLAVDSNHNAYSWGVGDSRRLGHGDCHARELPTKIESL--VRRVQSVYCGCS 678

Query: 280 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 339
           Y  A+T  G +Y++G G+   LGHG   D+  P  +   +   +  V + +GD H + L 
Sbjct: 679 YSAAITLRGNLYTWGRGTYGRLGHGNSDDQCMPAMVMALKDHQVLDVALGSGDAHTLCLT 738

Query: 340 SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGF 399
             G VY WG G  G LG+G       P  +  L      +V A  + +  L   G +Y +
Sbjct: 739 RGGLVYAWGDGDYGKLGNGSCNSSLQPLLIECLPR--VQRVFAGSQFSLALTCEGQLYSW 796

Query: 400 GWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNER 459
           G          +R V    + PR++ SL+   +  ++ G+ H + ++  G +FG+G N+ 
Sbjct: 797 GKASCLGHQLVERNVQGCSV-PRLITSLQHKRIVHVAVGVAHCLALSSNGEIFGWGRNDN 855

Query: 460 AQLGHDTLRGCLEP 473
            Q+   ++  C EP
Sbjct: 856 QQICPASV--CSEP 867



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 69/245 (28%), Positives = 114/245 (46%), Gaps = 12/245 (4%)

Query: 237  VHTCGSNTHGQLG--HGDTLDRPT-PKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
            V   G N   QLG   G  +  PT  ++I+ L  +     IA G   +  V+ +G VY+ 
Sbjct: 3047 VMVWGLNDKEQLGGLKGSKVKVPTFSQTISRLRPI----HIAGGSKSLFVVSQDGKVYAC 3102

Query: 294  GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 353
            G G+N  LG G  H+   P  +    +  +  V V +G +H +AL   G V++WG+G  G
Sbjct: 3103 GEGTNGRLGLGVTHNVPLPHQLPVLHQYVVKKVAVHSGGKHALALTLDGKVFSWGEGEDG 3162

Query: 354  ALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRG 413
             LGHG+      P  + +L++     +      +  +   G +Y +G   +G LG  D  
Sbjct: 3163 KLGHGNRSTLDKPRLVEALRAKKIRDIACGSSHSAAISSQGELYTWGLGEYGRLGHGDNA 3222

Query: 414  VSDKVLRPRILDSLRAHHVSQISTGLY--HTVVVTDRGRLFGFGDNERAQLGHDTLRGCL 471
                 L+P+++ +L    V Q++ G     T+ +T+ G +F +GD +  +LG     G  
Sbjct: 3223 TQ---LKPKLVTALHGRRVIQVACGSRDAQTLALTEDGAVFSWGDGDFGKLGRGGSEGSA 3279

Query: 472  EPTEI 476
             P EI
Sbjct: 3280 TPHEI 3284



 Score = 89.7 bits (221), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 75/258 (29%), Positives = 125/258 (48%), Gaps = 16/258 (6%)

Query: 224  GLNFTGFLTIRGHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSY 280
             L++ G  TI G  H    N  GQLG   G  +  PTP ++++ L  +    Q+A G   
Sbjct: 4192 ALSWGGASTIYGWGH----NHRGQLGGLEGSRIKTPTPCEALSLLRPI----QLAGGEQS 4243

Query: 281  MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 340
            + AVT +G +++ G GS   LG G       P  + + +   +  V V++G +H +AL +
Sbjct: 4244 LFAVTPDGKLFATGYGSGGRLGVGGSDSWAIPTLLGSLQHVFVKKVAVNSGGKHCLALTT 4303

Query: 341  SGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 400
             G VY WG+G  G LGHG+ +    P+ L  L       +      +  +  +G V  +G
Sbjct: 4304 DGEVYAWGEGEDGKLGHGNRMSYDRPKLLEHLNGMSVADIACGSAHSAAITASGHVLTWG 4363

Query: 401  WMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDNE 458
               +G LG  D   S+  LRP+++++L  +    I+  +G   T+ +TD   ++ +GD +
Sbjct: 4364 KGRYGRLGHGD---SEDQLRPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGD 4420

Query: 459  RAQLGHDTLRGCLEPTEI 476
              +LG     GC  P +I
Sbjct: 4421 YGKLGRGGSDGCKLPYKI 4438



 Score = 66.2 bits (160), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 72/244 (29%), Positives = 111/244 (45%), Gaps = 30/244 (12%)

Query: 119 GRYHTLLISNSSVFSCGSSLCGVLGHG-----PETTQCVSFTRINFPSAAHVVQVSASEN 173
           GR+   + SN + +S G      LGHG        T+  S  R        V  V    +
Sbjct: 626 GRHFLAVDSNHNAYSWGVGDSRRLGHGDCHARELPTKIESLVR-------RVQSVYCGCS 678

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT--AGLNFTGFL 231
           ++A +   G ++T G  +    GH +++     P +V ALK      V   +G   T  L
Sbjct: 679 YSAAITLRGNLYTWGRGTYGRLGHGNSDDQCM-PAMVMALKDHQVLDVALGSGDAHTLCL 737

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGSVVQIAAGPSYMLAVTGNGV 289
           T  G V+  G   +G+LG+G         S+ PL  E +  V ++ AG  + LA+T  G 
Sbjct: 738 TRGGLVYAWGDGDYGKLGNGS-----CNSSLQPLLIECLPRVQRVFAGSQFSLALTCEGQ 792

Query: 290 VYSFGSGSNFCLGHGEQHDELQ----PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVY 345
           +YS+G  S  CLGH      +Q    PR I + + K   +V V+ G  H +AL S+G ++
Sbjct: 793 LYSWGKAS--CLGHQLVERNVQGCSVPRLITSLQHK--RIVHVAVGVAHCLALSSNGEIF 848

Query: 346 TWGK 349
            WG+
Sbjct: 849 GWGR 852



 Score = 48.1 bits (113), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 46/184 (25%), Positives = 84/184 (45%), Gaps = 13/184 (7%)

Query: 121 YHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHV-VQVSASENHAAFVL 179
           Y   +    ++++ G    G LGHG    QC+    +       + V + + + H   + 
Sbjct: 679 YSAAITLRGNLYTWGRGTYGRLGHGNSDDQCMPAMVMALKDHQVLDVALGSGDAHTLCLT 738

Query: 180 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 239
           + G V+  GD      G+   N  + +P L+E L  V  ++V AG  F+  LT  G +++
Sbjct: 739 RGGLVYAWGDGDYGKLGNGSCNSSL-QPLLIECLPRV--QRVFAGSQFSLALTCEGQLYS 795

Query: 240 CGSNTHGQLGHGDTLDR-----PTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 294
            G  +   LGH   ++R       P+ I  L+    +V +A G ++ LA++ NG ++ +G
Sbjct: 796 WGKASC--LGH-QLVERNVQGCSVPRLITSLQH-KRIVHVAVGVAHCLALSSNGEIFGWG 851

Query: 295 SGSN 298
              N
Sbjct: 852 RNDN 855



 Score = 43.9 bits (102), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 34/135 (25%), Positives = 63/135 (46%), Gaps = 5/135 (3%)

Query: 332  DEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 391
            D+  ++   +  +Y WG  + G LG  +      P P  +L     +Q+   ++  F + 
Sbjct: 4189 DDWALSWGGASTIYGWGHNHRGQLGGLEGSRIKTPTPCEALSLLRPIQLAGGEQSLFAVT 4248

Query: 392  DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRG 449
              G ++     G+GS G    G SD    P +L SL+   V +++  +G  H + +T  G
Sbjct: 4249 PDGKLFA---TGYGSGGRLGVGGSDSWAIPTLLGSLQHVFVKKVAVNSGGKHCLALTTDG 4305

Query: 450  RLFGFGDNERAQLGH 464
             ++ +G+ E  +LGH
Sbjct: 4306 EVYAWGEGEDGKLGH 4320


>gi|224075844|ref|XP_002304793.1| predicted protein [Populus trichocarpa]
 gi|222842225|gb|EEE79772.1| predicted protein [Populus trichocarpa]
          Length = 1099

 Score =  122 bits (305), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 92/315 (29%), Positives = 150/315 (47%), Gaps = 22/315 (6%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V  ++    HAA V + G+VF+ G+      GH   +  +  P+ V+ LK    + V  G
Sbjct: 307 VQAIACGRQHAALVTKQGEVFSWGEELGGRLGH-GVDSDVSHPKFVDGLKNFNVELVACG 365

Query: 225 LNFTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSI-APLEEVGSVVQIAAGPSYM 281
              +  +T+ G ++  G N +  G LG G    +  P+ +  PLE +  V  ++ GP + 
Sbjct: 366 EYHSCAVTLSGDLYIWGGNAYNFGLLGCGSEATQWVPRKLDGPLEGI-HVSSVSCGPWHT 424

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL--- 338
             VT  G +++FG G+   LGHG++     PR +++   KG+  +R + G  H  A+   
Sbjct: 425 AVVTSAGQLFTFGDGTFGVLGHGDRISVSIPREVESL--KGLRTMRAACGVWHTAAVVEI 482

Query: 339 ---------DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFV 389
                     SSG ++TWG G    LGHGD+  + +P  +++L      QV      T  
Sbjct: 483 MVGSSNSSNCSSGKLFTWGDGDKCRLGHGDKEARLVPTCVATLVEPNFCQVACGHSLTAA 542

Query: 390 LVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRG 449
           L  TG VY  G   +G LG P    +D +L  R+   L  + V +++ G YH  V+T R 
Sbjct: 543 LTTTGQVYTMGSPVYGQLGNPQ---ADGMLPTRVEGKLMKNFVEELACGAYHVAVLTSRT 599

Query: 450 RLFGFGDNERAQLGH 464
            ++ +G     +LGH
Sbjct: 600 EVYTWGKGANGRLGH 614



 Score =  104 bits (260), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 91/274 (33%), Positives = 127/274 (46%), Gaps = 21/274 (7%)

Query: 116 ITTGRYHTLLISNSS---VFSCGSSLCGVLGHGPETTQCVSFTRINFP-SAAHVVQVSAS 171
           +  G YH+  ++ S    ++   +   G+LG G E TQ V   +++ P    HV  VS  
Sbjct: 362 VACGEYHSCAVTLSGDLYIWGGNAYNFGLLGCGSEATQWVP-RKLDGPLEGIHVSSVSCG 420

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
             H A V  +GQ+FT GD +    GH D    +  PR VE+LKG+   +   G+  T  +
Sbjct: 421 PWHTAVVTSAGQLFTFGDGTFGVLGHGD-RISVSIPREVESLKGLRTMRAACGVWHTAAV 479

Query: 232 T------------IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPS 279
                          G + T G     +LGHGD   R  P  +A L E  +  Q+A G S
Sbjct: 480 VEIMVGSSNSSNCSSGKLFTWGDGDKCRLGHGDKEARLVPTCVATLVEP-NFCQVACGHS 538

Query: 280 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 339
              A+T  G VY+ GS     LG+  Q D + P  ++    K   V  ++ G  HV  L 
Sbjct: 539 LTAALTTTGQVYTMGSPVYGQLGN-PQADGMLPTRVEGKLMKNF-VEELACGAYHVAVLT 596

Query: 340 SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
           S   VYTWGKG  G LGHGD  D+  P  + +LK
Sbjct: 597 SRTEVYTWGKGANGRLGHGDADDRNSPSVVEALK 630



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 98/354 (27%), Positives = 151/354 (42%), Gaps = 40/354 (11%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRI-----NFPSAAHVVQVS 169
           I  GR H  L++    VFS G  L G LGHG ++   VS  +      NF    +V  V+
Sbjct: 310 IACGRQHAALVTKQGEVFSWGEELGGRLGHGVDSD--VSHPKFVDGLKNF----NVELVA 363

Query: 170 ASENHAAFVLQSGQVFTCGDNSS----FCCGHRDTNRPIFRPRLVEA-LKGVPCKQVTAG 224
             E H+  V  SG ++  G N+       CG   T    + PR ++  L+G+    V+ G
Sbjct: 364 CGEYHSCAVTLSGDLYIWGGNAYNFGLLGCGSEATQ---WVPRKLDGPLEGIHVSSVSCG 420

Query: 225 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE------------EVGSVV 272
              T  +T  G + T G  T G LGHGD +    P+ +  L+               +VV
Sbjct: 421 PWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSIPREVESLKGLRTMRAACGVWHTAAVV 480

Query: 273 QIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGD 332
           +I  G S   +   +G ++++G G    LGHG++   L P  + T      +  +V+ G 
Sbjct: 481 EIMVG-SSNSSNCSSGKLFTWGDGDKCRLGHGDKEARLVPTCVATLVEP--NFCQVACGH 537

Query: 333 EHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLS-SLKSHLAVQVCARKRKTFVLV 391
               AL ++G VYT G    G LG+  + D  LP  +   L  +   ++        VL 
Sbjct: 538 SLTAALTTTGQVYTMGSPVYGQLGN-PQADGMLPTRVEGKLMKNFVEELACGAYHVAVLT 596

Query: 392 DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVV 445
               VY +G    G LG  D   +D    P ++++L+   V  I  G   T  +
Sbjct: 597 SRTEVYTWGKGANGRLGHGD---ADDRNSPSVVEALKDKQVKGIVCGTSFTAAI 647



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 82/298 (27%), Positives = 137/298 (45%), Gaps = 27/298 (9%)

Query: 205 FRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP 264
           F P+ +E+   +  + +  G      +T +G V + G    G+LGHG   D   PK +  
Sbjct: 294 FVPKALESAVLLDVQAIACGRQHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKFVDG 353

Query: 265 LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS-NF-CLGHGEQHDELQPRAIQTFRRKG 322
           L+   +V  +A G  +  AVT +G +Y +G  + NF  LG G +  +  PR +     +G
Sbjct: 354 LKNF-NVELVACGEYHSCAVTLSGDLYIWGGNAYNFGLLGCGSEATQWVPRKLDG-PLEG 411

Query: 323 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCA 382
           IHV  VS G  H   + S+G ++T+G G  G LGHGD I  ++P  + SLK    ++   
Sbjct: 412 IHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSIPREVESLKGLRTMRAAC 471

Query: 383 RKRKTFVLVD------------TGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAH 430
               T  +V+            +G ++ +G      LG  D+   +  L P  + +L   
Sbjct: 472 GVWHTAAVVEIMVGSSNSSNCSSGKLFTWGDGDKCRLGHGDK---EARLVPTCVATLVEP 528

Query: 431 HVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI-------FIQEM 481
           +  Q++ G   T  +T  G+++  G     QLG+    G L PT +       F++E+
Sbjct: 529 NFCQVACGHSLTAALTTTGQVYTMGSPVYGQLGNPQADGML-PTRVEGKLMKNFVEEL 585



 Score = 47.4 bits (111), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 42/129 (32%), Positives = 61/129 (47%), Gaps = 14/129 (10%)

Query: 339 DSSGYVYTWGKGYCGAL---------GHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFV 389
           D+ G VY WG+G    +         G G ++D  +P+ L S    L VQ  A  R+   
Sbjct: 260 DALGDVYIWGEGTGDGILGGGVHRIGGSGVQMDSFVPKALESA-VLLDVQAIACGRQHAA 318

Query: 390 LV-DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDR 448
           LV   G V+ +G    G LG    GV   V  P+ +D L+  +V  ++ G YH+  VT  
Sbjct: 319 LVTKQGEVFSWGEELGGRLGH---GVDSDVSHPKFVDGLKNFNVELVACGEYHSCAVTLS 375

Query: 449 GRLFGFGDN 457
           G L+ +G N
Sbjct: 376 GDLYIWGGN 384


>gi|414586169|tpg|DAA36740.1| TPA: putative regulator of chromosome condensation (RCC1) family
           protein [Zea mays]
          Length = 1056

 Score =  122 bits (305), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 99/324 (30%), Positives = 156/324 (48%), Gaps = 23/324 (7%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHR-DTNRPIFRPRLVEALKGVPCKQVTA 223
           V  V+    HAA V +  +VFT G+  S   GH   TN  +F+PRLVE+L     + +  
Sbjct: 265 VSYVACGVKHAALVTRQAEVFTWGEECSGRLGHGIGTN--VFQPRLVESLSTCNVELIAC 322

Query: 224 GLNFTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSY 280
           G   T  +T  G ++T G  TH  G LGHG  +    PK ++ PL+ +  V  ++ G  +
Sbjct: 323 GEFHTCAVTATGDLYTWGDGTHNAGLLGHGSNVSHWIPKRVSGPLDGL-PVSAVSCGTWH 381

Query: 281 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL-- 338
              +T +G +Y+FG G+   LGHG +     P+ +++   KG+  + VS G  H  A+  
Sbjct: 382 TALITSSGQLYTFGDGTFGVLGHGNRASCSYPKEVESL--KGLRTISVSCGVWHTAAVVE 439

Query: 339 -------DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 391
                   SSG ++TWG G    LGHGD   K  P  + SL  +   +       T  L 
Sbjct: 440 VIISQSNASSGKLFTWGDGDKYRLGHGDRSSKLKPTCVPSLIDYNFHKAACGHTLTIGLT 499

Query: 392 DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDS-LRAHHVSQISTGLYHTVVVTDRGR 450
            +G ++  G   +G LG P+    +    PR+++  L    V +++ G YH  V+T+ G 
Sbjct: 500 TSGHIFTVGSPVYGQLGNPN----NDGRYPRLVEEQLGGGGVVEVACGSYHVAVLTNAGE 555

Query: 451 LFGFGDNERAQLGHDTLRGCLEPT 474
           ++ +G     +LGH  +     PT
Sbjct: 556 VYTWGKGTNGRLGHGDIADRKVPT 579



 Score = 95.5 bits (236), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 82/278 (29%), Positives = 132/278 (47%), Gaps = 18/278 (6%)

Query: 116 ITTGRYHTLLISNSS---VFSCGSSLCGVLGHGPETTQCVSFTRINFP-SAAHVVQVSAS 171
           I  G +HT  ++ +     +  G+   G+LGHG   +  +   R++ P     V  VS  
Sbjct: 320 IACGEFHTCAVTATGDLYTWGDGTHNAGLLGHGSNVSHWIP-KRVSGPLDGLPVSAVSCG 378

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
             H A +  SGQ++T GD +    GH +     + P+ VE+LKG+    V+ G+  T  +
Sbjct: 379 TWHTALITSSGQLYTFGDGTFGVLGHGNRASCSY-PKEVESLKGLRTISVSCGVWHTAAV 437

Query: 232 ---------TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 282
                       G + T G     +LGHGD   +  P  +  L +  +  + A G +  +
Sbjct: 438 VEVIISQSNASSGKLFTWGDGDKYRLGHGDRSSKLKPTCVPSLIDY-NFHKAACGHTLTI 496

Query: 283 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
            +T +G +++ GS     LG+   +D   PR ++  +  G  VV V+ G  HV  L ++G
Sbjct: 497 GLTTSGHIFTVGSPVYGQLGN-PNNDGRYPRLVEE-QLGGGGVVEVACGSYHVAVLTNAG 554

Query: 343 YVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQV 380
            VYTWGKG  G LGHGD  D+ +P  + +LK     +V
Sbjct: 555 EVYTWGKGTNGRLGHGDIADRKVPTLVEALKDRSVKRV 592



 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 79/287 (27%), Positives = 128/287 (44%), Gaps = 19/287 (6%)

Query: 189 DNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQL 248
           D S++  G   T   +  P+ +E+   +    V  G+     +T +  V T G    G+L
Sbjct: 239 DRSAYSPG---TTTDVLVPKPLESNVMLDVSYVACGVKHAALVTRQAEVFTWGEECSGRL 295

Query: 249 GHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC--LGHGEQ 306
           GHG   +   P+ +  L    +V  IA G  +  AVT  G +Y++G G++    LGHG  
Sbjct: 296 GHGIGTNVFQPRLVESLSTC-NVELIACGEFHTCAVTATGDLYTWGDGTHNAGLLGHGSN 354

Query: 307 HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP 366
                P+ + +    G+ V  VS G  H   + SSG +YT+G G  G LGHG+    + P
Sbjct: 355 VSHWIPKRV-SGPLDGLPVSAVSCGTWHTALITSSGQLYTFGDGTFGVLGHGNRASCSYP 413

Query: 367 EPLSSLKSHLAVQVCARKRKTFVLVD---------TGSVYGFGWMGFGSLGFPDRGVSDK 417
           + + SLK    + V      T  +V+         +G ++ +G      LG  DR     
Sbjct: 414 KEVESLKGLRTISVSCGVWHTAAVVEVIISQSNASSGKLFTWGDGDKYRLGHGDRSSK-- 471

Query: 418 VLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 464
            L+P  + SL  ++  + + G   T+ +T  G +F  G     QLG+
Sbjct: 472 -LKPTCVPSLIDYNFHKAACGHTLTIGLTTSGHIFTVGSPVYGQLGN 517



 Score = 59.3 bits (142), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 49/174 (28%), Positives = 77/174 (44%), Gaps = 4/174 (2%)

Query: 304 GEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK 363
           G   D L P+ +++     + V  V+ G +H   +     V+TWG+   G LGHG   + 
Sbjct: 246 GTTTDVLVPKPLES--NVMLDVSYVACGVKHAALVTRQAEVFTWGEECSGRLGHGIGTNV 303

Query: 364 TLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRP-R 422
             P  + SL +     +   +  T  +  TG +Y +G  G  + G    G +     P R
Sbjct: 304 FQPRLVESLSTCNVELIACGEFHTCAVTATGDLYTWG-DGTHNAGLLGHGSNVSHWIPKR 362

Query: 423 ILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 476
           +   L    VS +S G +HT ++T  G+L+ FGD     LGH     C  P E+
Sbjct: 363 VSGPLDGLPVSAVSCGTWHTALITSSGQLYTFGDGTFGVLGHGNRASCSYPKEV 416



 Score = 42.0 bits (97), Expect = 0.62,   Method: Compositional matrix adjust.
 Identities = 35/114 (30%), Positives = 55/114 (48%), Gaps = 7/114 (6%)

Query: 122 HTL---LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
           HTL   L ++  +F+ GS + G LG+     +              VV+V+    H A +
Sbjct: 492 HTLTIGLTTSGHIFTVGSPVYGQLGNPNNDGRYPRLVEEQL-GGGGVVEVACGSYHVAVL 550

Query: 179 LQSGQVFTCGDNSSFCCGHRD-TNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
             +G+V+T G  ++   GH D  +R +  P LVEALK    K+V  G +FT  +
Sbjct: 551 TNAGEVYTWGKGTNGRLGHGDIADRKV--PTLVEALKDRSVKRVACGSSFTAAI 602


>gi|90399178|emb|CAJ86040.1| H0723C07.10 [Oryza sativa Indica Group]
          Length = 1082

 Score =  122 bits (305), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 100/332 (30%), Positives = 157/332 (47%), Gaps = 23/332 (6%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V  V+    HAA V +  +VFT G+  S   GH      IF+PRLVE+L     + +  G
Sbjct: 288 VSYVACGVKHAALVTRQAEVFTWGEECSGRLGH-GAGTSIFQPRLVESLSICNVETIACG 346

Query: 225 LNFTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSYM 281
              T  +T  G ++T G  TH  G LGHG  +    PK ++ PLE +  V  ++ G  + 
Sbjct: 347 EFHTCAITATGDLYTWGDGTHNAGLLGHGSNVSHWIPKRVSGPLEGL-QVSAVSCGTWHT 405

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL--- 338
             +T +G +Y+FG G+   LGHG +     P+ +++   KG+  + VS G  H  A+   
Sbjct: 406 ALITSSGKLYTFGDGTFGVLGHGNRETISYPKEVESL--KGLRTISVSCGVWHTAAVVEV 463

Query: 339 ------DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVD 392
                  SSG ++TWG G    LGHGD   K  P  + SL  +   +       T  L  
Sbjct: 464 IMAQSNTSSGKLFTWGDGDKYRLGHGDRSSKLKPTCVPSLIDYNFHKAVCGHTLTIGLTT 523

Query: 393 TGSVYGFGWMGFGSLGFPDRGVSDKVLRPRIL-DSLRAHHVSQISTGLYHTVVVTDRGRL 451
           +G ++  G   +G LG P+    +    PR++ + L    V ++  G YH  V+T  G +
Sbjct: 524 SGHIFTAGSSVYGQLGNPN----NDGRYPRLVEEKLGGGGVVEVVCGAYHVAVLTQSGEV 579

Query: 452 FGFGDNERAQLGHDTLRGCLEPTEIFIQEMEE 483
           + +G     +LGH  +     PT  F++ + +
Sbjct: 580 YTWGKGANGRLGHGDIADRKTPT--FVEALRD 609



 Score = 88.6 bits (218), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 85/338 (25%), Positives = 150/338 (44%), Gaps = 20/338 (5%)

Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 179
           ++  L+   + VF+ G    G LGHG  T+       +   S  +V  ++  E H   + 
Sbjct: 296 KHAALVTRQAEVFTWGEECSGRLGHGAGTS-IFQPRLVESLSICNVETIACGEFHTCAIT 354

Query: 180 QSGQVFTCGD--NSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHV 237
            +G ++T GD  +++   GH          R+   L+G+    V+ G   T  +T  G +
Sbjct: 355 ATGDLYTWGDGTHNAGLLGHGSNVSHWIPKRVSGPLEGLQVSAVSCGTWHTALITSSGKL 414

Query: 238 HTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV---------TGNG 288
           +T G  T G LGHG+      PK +  L+ +   + ++ G  +  AV         T +G
Sbjct: 415 YTFGDGTFGVLGHGNRETISYPKEVESLKGL-RTISVSCGVWHTAAVVEVIMAQSNTSSG 473

Query: 289 VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 348
            ++++G G  + LGHG++  +L+P  + +      H  +   G    + L +SG+++T G
Sbjct: 474 KLFTWGDGDKYRLGHGDRSSKLKPTCVPSLIDYNFH--KAVCGHTLTIGLTTSGHIFTAG 531

Query: 349 KGYCGALGHGDEIDKTLPEPL-SSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSL 407
               G LG+ +  D   P  +   L     V+V        VL  +G VY +G    G L
Sbjct: 532 SSVYGQLGNPNN-DGRYPRLVEEKLGGGGVVEVVCGAYHVAVLTQSGEVYTWGKGANGRL 590

Query: 408 GFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVV 445
           G  D  ++D+   P  +++LR   V +I+ G   T  +
Sbjct: 591 GHGD--IADRKT-PTFVEALRDRSVKRIACGSGFTAAI 625



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 84/273 (30%), Positives = 129/273 (47%), Gaps = 22/273 (8%)

Query: 116 ITTGRYHTLLISNSS---VFSCGSSLCGVLGHGPETTQCVSFTRINFP-SAAHVVQVSAS 171
           I  G +HT  I+ +     +  G+   G+LGHG   +  +   R++ P     V  VS  
Sbjct: 343 IACGEFHTCAITATGDLYTWGDGTHNAGLLGHGSNVSHWIP-KRVSGPLEGLQVSAVSCG 401

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGH--RDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
             H A +  SG+++T GD +    GH  R+T   I  P+ VE+LKG+    V+ G+  T 
Sbjct: 402 TWHTALITSSGKLYTFGDGTFGVLGHGNRET---ISYPKEVESLKGLRTISVSCGVWHTA 458

Query: 230 FL---------TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 280
            +         T  G + T G     +LGHGD   +  P  +  L +  +  +   G + 
Sbjct: 459 AVVEVIMAQSNTSSGKLFTWGDGDKYRLGHGDRSSKLKPTCVPSLIDY-NFHKAVCGHTL 517

Query: 281 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 340
            + +T +G +++ GS     LG+   +D   PR ++  +  G  VV V  G  HV  L  
Sbjct: 518 TIGLTTSGHIFTAGSSVYGQLGN-PNNDGRYPRLVEE-KLGGGGVVEVVCGAYHVAVLTQ 575

Query: 341 SGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
           SG VYTWGKG  G LGHGD  D+  P  + +L+
Sbjct: 576 SGEVYTWGKGANGRLGHGDIADRKTPTFVEALR 608



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 75/272 (27%), Positives = 123/272 (45%), Gaps = 16/272 (5%)

Query: 204 IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 263
           I  P+ +E+   +    V  G+     +T +  V T G    G+LGHG       P+ + 
Sbjct: 274 ILVPKPLESNVMLDVSYVACGVKHAALVTRQAEVFTWGEECSGRLGHGAGTSIFQPRLVE 333

Query: 264 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC--LGHGEQHDELQPRAIQTFRRK 321
            L  + +V  IA G  +  A+T  G +Y++G G++    LGHG       P+ + +   +
Sbjct: 334 SL-SICNVETIACGEFHTCAITATGDLYTWGDGTHNAGLLGHGSNVSHWIPKRV-SGPLE 391

Query: 322 GIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVC 381
           G+ V  VS G  H   + SSG +YT+G G  G LGHG+    + P+ + SLK    + V 
Sbjct: 392 GLQVSAVSCGTWHTALITSSGKLYTFGDGTFGVLGHGNRETISYPKEVESLKGLRTISVS 451

Query: 382 ARKRKTFVLVD---------TGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHV 432
                T  +V+         +G ++ +G      LG  DR      L+P  + SL  ++ 
Sbjct: 452 CGVWHTAAVVEVIMAQSNTSSGKLFTWGDGDKYRLGHGDRSSK---LKPTCVPSLIDYNF 508

Query: 433 SQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 464
            +   G   T+ +T  G +F  G +   QLG+
Sbjct: 509 HKAVCGHTLTIGLTTSGHIFTAGSSVYGQLGN 540



 Score = 56.2 bits (134), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 44/155 (28%), Positives = 66/155 (42%), Gaps = 2/155 (1%)

Query: 323 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCA 382
           + V  V+ G +H   +     V+TWG+   G LGHG       P  + SL       +  
Sbjct: 286 LDVSYVACGVKHAALVTRQAEVFTWGEECSGRLGHGAGTSIFQPRLVESLSICNVETIAC 345

Query: 383 RKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRP-RILDSLRAHHVSQISTGLYH 441
            +  T  +  TG +Y +G  G  + G    G +     P R+   L    VS +S G +H
Sbjct: 346 GEFHTCAITATGDLYTWG-DGTHNAGLLGHGSNVSHWIPKRVSGPLEGLQVSAVSCGTWH 404

Query: 442 TVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 476
           T ++T  G+L+ FGD     LGH        P E+
Sbjct: 405 TALITSSGKLYTFGDGTFGVLGHGNRETISYPKEV 439


>gi|379719198|ref|YP_005311329.1| protein ChiA12 [Paenibacillus mucilaginosus 3016]
 gi|378567870|gb|AFC28180.1| ChiA12 [Paenibacillus mucilaginosus 3016]
          Length = 1205

 Score =  121 bits (304), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 119/395 (30%), Positives = 179/395 (45%), Gaps = 44/395 (11%)

Query: 93  VLRFLQSVEHSSDIV----ETSAGNMQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPE 147
           +L  LQ+V   SD V     T +G      G  HTL L +N +V++ G    G LG+G  
Sbjct: 17  LLLPLQAVADESDSVVAAKSTYSGIRMAAGGESHTLALNANGTVWAWGG---GQLGNGST 73

Query: 148 TTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDT---NRPI 204
           T         +  S   V  ++A  +H   +   G V+  G N     G   T   N P+
Sbjct: 74  TGSPAPVQVQDLHS---VEAIAAGGSHNLAIKSDGTVWAWGFNGYGQLGDGSTTGRNTPV 130

Query: 205 FRPRLVEALKGVPCKQVTAGLNFTGFLTIR--GHVHTCGSNTHGQLGHGDTLDRPTPKSI 262
                VE L+ +    V A  ++   L ++  G V   G N +GQLG G   DR TP  +
Sbjct: 131 ----QVEGLRSI----VGAAAHYDHSLALKSDGTVWAWGRNEYGQLGDGSKTDRHTPVRV 182

Query: 263 APLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKG 322
             L+   SVV I++G  Y LAV  +G V+++G      LG+G       P  +Q     G
Sbjct: 183 KGLD---SVVAISSGFGYSLAVKSDGTVWAWGKNEYGQLGNGSTTQSSAPVQVQ-----G 234

Query: 323 IH-VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVC 381
           +H V  V++GD H +A+   G V++WG    G LG G ++D+  P  +    S  AV V 
Sbjct: 235 LHSVTAVASGDYHNLAIKRDGTVWSWGPNLAGQLGDGSDMDRYTPVQVEGFSS--AVDVD 292

Query: 382 ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYH 441
           A    +  L   G+V+ +G   F   GF     S   ++ + LDS     V  I+ G  H
Sbjct: 293 AGFGHSLALKSDGTVWAWGNYQFNEWGFG----SSTPVQVQELDS-----VVDIAAGTQH 343

Query: 442 TVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 476
           ++ V + G ++ +G N+  QLG  T    L P ++
Sbjct: 344 SLAVRNDGTVWAWGKNDNGQLGDGTSTARLTPIKV 378



 Score = 62.4 bits (150), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 59/207 (28%), Positives = 97/207 (46%), Gaps = 16/207 (7%)

Query: 114 MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           + I++G  ++L + S+ +V++ G +  G LG+G  TTQ  +  ++       V  V++ +
Sbjct: 189 VAISSGFGYSLAVKSDGTVWAWGKNEYGQLGNG-STTQSSAPVQVQ--GLHSVTAVASGD 245

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
            H   + + G V++ G N +   G   D +R  + P  VE         V AG   +  L
Sbjct: 246 YHNLAIKRDGTVWSWGPNLAGQLGDGSDMDR--YTPVQVEGFSS--AVDVDAGFGHSLAL 301

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
              G V   G+    + G G +    TP  +   +E+ SVV IAAG  + LAV  +G V+
Sbjct: 302 KSDGTVWAWGNYQFNEWGFGSS----TPVQV---QELDSVVDIAAGTQHSLAVRNDGTVW 354

Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTF 318
           ++G   N  LG G     L P  +Q F
Sbjct: 355 AWGKNDNGQLGDGTSTARLTPIKVQGF 381


>gi|405954128|gb|EKC21651.1| Putative E3 ubiquitin-protein ligase HERC1 [Crassostrea gigas]
          Length = 826

 Score =  121 bits (304), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 105/340 (30%), Positives = 166/340 (48%), Gaps = 21/340 (6%)

Query: 115 QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSAS-- 171
           Q+  G++ T LI S+ +V +CG    G LG G ++  C S  +       +V ++S+S  
Sbjct: 432 QVEAGQFCTFLIYSDGTVGACGKGSYGRLGLG-DSNNC-SVPKKPLFDKKYVKKISSSKG 489

Query: 172 -ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEA-LKGVPCKQVTAGLNFTG 229
            + H+  +  +G+V++ GD      GH  T+     P+LV+  L G   K V+AG   + 
Sbjct: 490 SDGHSLALTTTGEVYSWGDGDYGKLGH-GTHSTQKIPKLVKGPLVGKVVKCVSAGYRHSA 548

Query: 230 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG- 288
            +T  G ++T G    G+LGH  T  +  P  +  +E VG V   A G S+ LAV+ +G 
Sbjct: 549 AVTEDGELYTWGDGEFGRLGHDYTSSKNFPTKVQSIESVGLV---ACGGSHTLAVSQDGK 605

Query: 289 VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 348
            ++SFG G N  LGHG+ + +L+P+ I+     G+++ +V+ G +  +A+ SSG +Y WG
Sbjct: 606 TIWSFGGGENGKLGHGDTNRQLKPKVIEALN--GLYIRKVACGSQSSLAVTSSGQLYAWG 663

Query: 349 KGYCGA-LGHGD-EIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGS 406
              CGA LG G  E     P  +  L+S   V +         L     VY +G    G 
Sbjct: 664 ---CGAILGCGSAEYTALRPRLVEDLQSKRMVDIACGDSHVIALTHESEVYAWGNNAMGQ 720

Query: 407 LGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT 446
            G         + RP+ +  L    V Q+S G  H+V  T
Sbjct: 721 CG--QGHAQSPITRPKRVIGLDGVSVHQVSAGTSHSVAWT 758



 Score =  107 bits (268), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 86/293 (29%), Positives = 139/293 (47%), Gaps = 19/293 (6%)

Query: 169 SASENHAAFVLQSGQVFTCGDNSSFCCGHRDT---NRPIFRPRLVEALKGVPCKQVTAGL 225
           S S ++A      G+V+  G N    C H+        I  P+         C+QV AG 
Sbjct: 384 STSHSNANLSGSCGEVYVWGSN----CTHQLAEGGQEKITTPKYSAVF--TDCQQVEAGQ 437

Query: 226 NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPS---YML 282
             T  +   G V  CG  ++G+LG GD+ +   PK   PL +   V +I++      + L
Sbjct: 438 FCTFLIYSDGTVGACGKGSYGRLGLGDSNNCSVPKK--PLFDKKYVKKISSSKGSDGHSL 495

Query: 283 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
           A+T  G VYS+G G    LGHG    +  P+ ++     G  V  VSAG  H  A+   G
Sbjct: 496 ALTTTGEVYSWGDGDYGKLGHGTHSTQKIPKLVKG-PLVGKVVKCVSAGYRHSAAVTEDG 554

Query: 343 YVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWM 402
            +YTWG G  G LGH     K  P  + S++S + +  C       V  D  +++ FG  
Sbjct: 555 ELYTWGDGEFGRLGHDYTSSKNFPTKVQSIES-VGLVACGGSHTLAVSQDGKTIWSFGGG 613

Query: 403 GFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFG 455
             G LG  D   +++ L+P+++++L   ++ +++ G   ++ VT  G+L+ +G
Sbjct: 614 ENGKLGHGD---TNRQLKPKVIEALNGLYIRKVACGSQSSLAVTSSGQLYAWG 663



 Score =  102 bits (255), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 84/310 (27%), Positives = 145/310 (46%), Gaps = 30/310 (9%)

Query: 167 QVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTN------RPIFRPRLVEALKGVPCKQ 220
           QV A +     +   G V  CG  S    G  D+N      +P+F  + V   K +   +
Sbjct: 432 QVEAGQFCTFLIYSDGTVGACGKGSYGRLGLGDSNNCSVPKKPLFDKKYV---KKISSSK 488

Query: 221 VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSI-APLEEVGSVVQ-IAAGP 278
            + G +    LT  G V++ G   +G+LGHG    +  PK +  PL  VG VV+ ++AG 
Sbjct: 489 GSDGHSLA--LTTTGEVYSWGDGDYGKLGHGTHSTQKIPKLVKGPL--VGKVVKCVSAGY 544

Query: 279 SYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
            +  AVT +G +Y++G G    LGH     +  P  +Q+    G+    V+ G  H +A+
Sbjct: 545 RHSAAVTEDGELYTWGDGEFGRLGHDYTSSKNFPTKVQSIESVGL----VACGGSHTLAV 600

Query: 339 DSSGY-VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVY 397
              G  ++++G G  G LGHGD   +  P+ + +L      +V    + +  +  +G +Y
Sbjct: 601 SQDGKTIWSFGGGENGKLGHGDTNRQLKPKVIEALNGLYIRKVACGSQSSLAVTSSGQLY 660

Query: 398 GFGW---MGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 454
            +G    +G GS  +         LRPR+++ L++  +  I+ G  H + +T    ++ +
Sbjct: 661 AWGCGAILGCGSAEY-------TALRPRLVEDLQSKRMVDIACGDSHVIALTHESEVYAW 713

Query: 455 GDNERAQLGH 464
           G+N   Q G 
Sbjct: 714 GNNAMGQCGQ 723



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 88/308 (28%), Positives = 132/308 (42%), Gaps = 33/308 (10%)

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTA--GLNFTGFL 231
           +AA +L     F   D +S CC   D N                C   T+    N +G  
Sbjct: 353 YAAVILLEELYFLASDYASNCCSGPDEN----------------CNNSTSHSNANLSGSC 396

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
              G V+  GSN   QL  G      TPK  A   +     Q+ AG      +  +G V 
Sbjct: 397 ---GEVYVWGSNCTHQLAEGGQEKITTPKYSAVFTDCQ---QVEAGQFCTFLIYSDGTVG 450

Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG-DEHVVALDSSGYVYTWGKG 350
           + G GS   LG G+ ++   P+    F +K +  +  S G D H +AL ++G VY+WG G
Sbjct: 451 ACGKGSYGRLGLGDSNNCSVPKK-PLFDKKYVKKISSSKGSDGHSLALTTTGEVYSWGDG 509

Query: 351 YCGALGHGDEIDKTLPEPLS-SLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGF 409
             G LGHG    + +P+ +   L   +   V A  R +  + + G +Y +G   FG LG 
Sbjct: 510 DYGKLGHGTHSTQKIPKLVKGPLVGKVVKCVSAGYRHSAAVTEDGELYTWGDGEFGRLGH 569

Query: 410 PDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGR-LFGFGDNERAQLGHDTLR 468
            D   S     P  + S+ +  V  ++ G  HT+ V+  G+ ++ FG  E  +LGH    
Sbjct: 570 -DYTSSKNF--PTKVQSIES--VGLVACGGSHTLAVSQDGKTIWSFGGGENGKLGHGDTN 624

Query: 469 GCLEPTEI 476
             L+P  I
Sbjct: 625 RQLKPKVI 632


>gi|156396932|ref|XP_001637646.1| predicted protein [Nematostella vectensis]
 gi|156224760|gb|EDO45583.1| predicted protein [Nematostella vectensis]
          Length = 1345

 Score =  121 bits (304), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 89/282 (31%), Positives = 140/282 (49%), Gaps = 12/282 (4%)

Query: 199 DTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPT 258
           ++ R +  P + ++L     +QV  G N T  + + G +  CG  ++G+LG G++ D  T
Sbjct: 503 ESGRGVNVPTVTKSLAS--AQQVVCGQNCTFVVQVNGTILACGEGSYGRLGMGNSDDLFT 560

Query: 259 PKSIAPLEEVGSVVQIAAG---PSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAI 315
              I+ L+    V+QIA       + LA+T +G V+S+G G    LGHG    + +PR I
Sbjct: 561 LSPISALQGY-VVIQIATSRGSDGHSLALTDSGEVFSWGDGDYGKLGHGNSDRQRRPRQI 619

Query: 316 QTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSH 375
           +  R  G  VV ++ G +H   +   G ++T+G G  G LGHG+  +K  PE +++L+ H
Sbjct: 620 EALR--GEEVVNMACGFKHSAVVTVDGKLFTFGNGDYGRLGHGNSANKKTPERVTALEKH 677

Query: 376 LAVQVCARKRKTFVL-VDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQ 434
              QV      T VL  D  +V+ FG   +G LG    G       P+ +D L      +
Sbjct: 678 AIGQVACGLNHTLVLSADGNTVWAFGDGDYGKLGL---GSCTAKTSPQAIDVLAGIGCKK 734

Query: 435 ISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 476
           I  G   +VV+T+ GR+F FG           LRG  +P +I
Sbjct: 735 ICCGTQFSVVLTNDGRVFSFGQERLTGQPEGRLRGPQKPQQI 776



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 89/317 (28%), Positives = 147/317 (46%), Gaps = 19/317 (5%)

Query: 157 INFP----SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEA 212
           +N P    S A   QV   +N    V  +G +  CG+ S    G  +++  +F    + A
Sbjct: 508 VNVPTVTKSLASAQQVVCGQNCTFVVQVNGTILACGEGSYGRLGMGNSDD-LFTLSPISA 566

Query: 213 LKGVPCKQVTAGLNFTGF---LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EE 267
           L+G    Q+       G    LT  G V + G   +G+LGHG++  +  P+ I  L  EE
Sbjct: 567 LQGYVVIQIATSRGSDGHSLALTDSGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALRGEE 626

Query: 268 VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVR 327
           V   V +A G  +   VT +G +++FG+G    LGHG   ++  P  +    +  I   +
Sbjct: 627 V---VNMACGFKHSAVVTVDGKLFTFGNGDYGRLGHGNSANKKTPERVTALEKHAIG--Q 681

Query: 328 VSAGDEHVVALDSSG-YVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRK 386
           V+ G  H + L + G  V+ +G G  G LG G    KT P+ +  L      ++C   + 
Sbjct: 682 VACGLNHTLVLSADGNTVWAFGDGDYGKLGLGSCTAKTSPQAIDVLAGIGCKKICCGTQF 741

Query: 387 TFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT 446
           + VL + G V+ FG       G P+ G      +P+ + +L +H +  +  G  H + +T
Sbjct: 742 SVVLTNDGRVFSFGQERL--TGQPE-GRLRGPQKPQQIQALASHFIDDVCVGAEHVLALT 798

Query: 447 DRGRLFGFGDNERAQLG 463
             G ++G+G+N   QLG
Sbjct: 799 STGEVWGWGNNVDGQLG 815



 Score = 98.6 bits (244), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 84/332 (25%), Positives = 146/332 (43%), Gaps = 58/332 (17%)

Query: 106 IVETSAGNMQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAH 164
           + ++ A   Q+  G+  T ++  N ++ +CG    G LG G  +    + + I+      
Sbjct: 513 VTKSLASAQQVVCGQNCTFVVQVNGTILACGEGSYGRLGMG-NSDDLFTLSPISALQGYV 571

Query: 165 VVQVSAS---ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQV 221
           V+Q++ S   + H+  +  SG+VF+ GD      GH +++R   RPR +EAL+G     +
Sbjct: 572 VIQIATSRGSDGHSLALTDSGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALRGEEVVNM 630

Query: 222 TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 281
             G   +  +T+ G + T G+  +G+LGHG++ ++ TP+ +  LE+  ++ Q+A G ++ 
Sbjct: 631 ACGFKHSAVVTVDGKLFTFGNGDYGRLGHGNSANKKTPERVTALEK-HAIGQVACGLNHT 689

Query: 282 LAVTGNG-VVYSFGSGSNFCLGHGEQHDELQPRAIQTF---------------------- 318
           L ++ +G  V++FG G    LG G    +  P+AI                         
Sbjct: 690 LVLSADGNTVWAFGDGDYGKLGLGSCTAKTSPQAIDVLAGIGCKKICCGTQFSVVLTNDG 749

Query: 319 ----------------RRKGIH------------VVRVSAGDEHVVALDSSGYVYTWGKG 350
                           R +G              +  V  G EHV+AL S+G V+ WG  
Sbjct: 750 RVFSFGQERLTGQPEGRLRGPQKPQQIQALASHFIDDVCVGAEHVLALTSTGEVWGWGNN 809

Query: 351 YCGALGHGDEIDKTLPEPLSSLKSHLAVQVCA 382
             G LG G    +  P  +  LK     Q+ A
Sbjct: 810 VDGQLGLGHSNAQREPCVIPDLKGKNIRQISA 841



 Score = 75.1 bits (183), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 50/177 (28%), Positives = 86/177 (48%), Gaps = 11/177 (6%)

Query: 291 YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKG 350
           Y +G G      HG+  +  +   + T  +      +V  G      +  +G +   G+G
Sbjct: 491 YLWGGGR-----HGQLAESGRGVNVPTVTKSLASAQQVVCGQNCTFVVQVNGTILACGEG 545

Query: 351 YCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRK---TFVLVDTGSVYGFGWMGFGSL 407
             G LG G+  D     P+S+L+ ++ +Q+   +     +  L D+G V+ +G   +G L
Sbjct: 546 SYGRLGMGNSDDLFTLSPISALQGYVVIQIATSRGSDGHSLALTDSGEVFSWGDGDYGKL 605

Query: 408 GFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 464
           G    G SD+  RPR +++LR   V  ++ G  H+ VVT  G+LF FG+ +  +LGH
Sbjct: 606 G---HGNSDRQRRPRQIEALRGEEVVNMACGFKHSAVVTVDGKLFTFGNGDYGRLGH 659



 Score = 48.1 bits (113), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 44/147 (29%), Positives = 65/147 (44%), Gaps = 9/147 (6%)

Query: 345 YTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGF 404
           Y WG G  G L         +P    SL S  A QV   +  TFV+   G++   G   +
Sbjct: 491 YLWGGGRHGQLAESGR-GVNVPTVTKSLAS--AQQVVCGQNCTFVVQVNGTILACGEGSY 547

Query: 405 GSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLY---HTVVVTDRGRLFGFGDNERAQ 461
           G LG    G SD +     + +L+ + V QI+T      H++ +TD G +F +GD +  +
Sbjct: 548 GRLGM---GNSDDLFTLSPISALQGYVVIQIATSRGSDGHSLALTDSGEVFSWGDGDYGK 604

Query: 462 LGHDTLRGCLEPTEIFIQEMEEDTGLA 488
           LGH        P +I     EE   +A
Sbjct: 605 LGHGNSDRQRRPRQIEALRGEEVVNMA 631


>gi|357128620|ref|XP_003565969.1| PREDICTED: uncharacterized protein LOC100827763 [Brachypodium
           distachyon]
          Length = 1007

 Score =  121 bits (304), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 94/323 (29%), Positives = 151/323 (46%), Gaps = 20/323 (6%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V Q+S    H A   + G+VFT G+      GH  T+  I RP+LVE+L     + +  G
Sbjct: 256 VQQISCGSRHIALTTRQGEVFTWGEELGGRLGH-GTDEDISRPKLVESLAVSNVEYIACG 314

Query: 225 LNFTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSYM 281
              T  +T  G ++  G  ++  G LGHG       PK ++ PLE +  V+ +A G  + 
Sbjct: 315 EFHTCAVTASGDLYNWGDGSYNAGLLGHGIGASHWLPKRVSGPLEGL-QVLSVACGSWHS 373

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS- 340
                +G V++FG G+   LGHG + +   P+ +++    G   ++V+ G  H  A+   
Sbjct: 374 ALAMSSGKVFTFGDGTFGALGHGNRENVAYPKEVESL--SGFRTMKVACGVWHSAAIVET 431

Query: 341 ---------SGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 391
                    S  ++TWG G    LGHGD+  + +P  + +L  +   QV      T  L 
Sbjct: 432 TSQTGVNMVSRKLFTWGDGDKNRLGHGDKEARLVPTVVQALVDNNFHQVACGYSMTIALA 491

Query: 392 DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRL 451
            +G V+  G   +G LG P    +D     ++ D L +  V +IS G YH  V+T R  +
Sbjct: 492 TSGHVFTMGSSNYGQLGNPK---ADGKQPCQVQDKLSSELVEEISCGSYHVAVLTSRSEV 548

Query: 452 FGFGDNERAQLGHDTLRGCLEPT 474
           + +G     +LGH  +    +PT
Sbjct: 549 YTWGMGANGRLGHGGIEDKKKPT 571



 Score = 98.2 bits (243), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 83/290 (28%), Positives = 133/290 (45%), Gaps = 17/290 (5%)

Query: 190 NSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLG 249
           +S+  C   D    +  P+ +E+   +  +Q++ G       T +G V T G    G+LG
Sbjct: 232 SSNLVCSKTD----VLIPKPLESDVVLDVQQISCGSRHIALTTRQGEVFTWGEELGGRLG 287

Query: 250 HGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC--LGHGEQH 307
           HG   D   PK +  L  V +V  IA G  +  AVT +G +Y++G GS     LGHG   
Sbjct: 288 HGTDEDISRPKLVESLA-VSNVEYIACGEFHTCAVTASGDLYNWGDGSYNAGLLGHGIGA 346

Query: 308 DELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPE 367
               P+ + +   +G+ V+ V+ G  H     SSG V+T+G G  GALGHG+  +   P+
Sbjct: 347 SHWLPKRV-SGPLEGLQVLSVACGSWHSALAMSSGKVFTFGDGTFGALGHGNRENVAYPK 405

Query: 368 PLSSLKSHLAVQVCARKRKTFVLVDTGSVYG--------FGWMGFGSLGFPDRGVSDKVL 419
            + SL     ++V      +  +V+T S  G        F W G G       G  +  L
Sbjct: 406 EVESLSGFRTMKVACGVWHSAAIVETTSQTGVNMVSRKLFTW-GDGDKNRLGHGDKEARL 464

Query: 420 RPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG 469
            P ++ +L  ++  Q++ G   T+ +   G +F  G +   QLG+    G
Sbjct: 465 VPTVVQALVDNNFHQVACGYSMTIALATSGHVFTMGSSNYGQLGNPKADG 514



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 97/346 (28%), Positives = 149/346 (43%), Gaps = 22/346 (6%)

Query: 114 MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSAS 171
            QI+ G  H  L +    VF+ G  L G LGHG  T + +S  + +   + ++V  ++  
Sbjct: 257 QQISCGSRHIALTTRQGEVFTWGEELGGRLGHG--TDEDISRPKLVESLAVSNVEYIACG 314

Query: 172 ENHAAFVLQSGQVFTCGDNS--SFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
           E H   V  SG ++  GD S  +   GH          R+   L+G+    V  G   + 
Sbjct: 315 EFHTCAVTASGDLYNWGDGSYNAGLLGHGIGASHWLPKRVSGPLEGLQVLSVACGSWHSA 374

Query: 230 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV----- 284
                G V T G  T G LGHG+  +   PK +  L      +++A G  +  A+     
Sbjct: 375 LAMSSGKVFTFGDGTFGALGHGNRENVAYPKEVESLSGF-RTMKVACGVWHSAAIVETTS 433

Query: 285 -TGNGVV----YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 339
            TG  +V    +++G G    LGHG++   L P  +Q       H  +V+ G    +AL 
Sbjct: 434 QTGVNMVSRKLFTWGDGDKNRLGHGDKEARLVPTVVQALVDNNFH--QVACGYSMTIALA 491

Query: 340 SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGF 399
           +SG+V+T G    G LG+     K   +    L S L  ++        VL     VY +
Sbjct: 492 TSGHVFTMGSSNYGQLGNPKADGKQPCQVQDKLSSELVEEISCGSYHVAVLTSRSEVYTW 551

Query: 400 GWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVV 445
           G    G LG    G+ DK  +P I+D+L+  HV  I+ G   T  +
Sbjct: 552 GMGANGRLGH--GGIEDK-KKPTIVDALKDRHVKSIACGSNFTTCI 594



 Score = 95.1 bits (235), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 87/291 (29%), Positives = 132/291 (45%), Gaps = 20/291 (6%)

Query: 116 ITTGRYHTLLISNSS---VFSCGSSLCGVLGHGPETTQCVSFTRINFP-SAAHVVQVSAS 171
           I  G +HT  ++ S     +  GS   G+LGHG   +  +   R++ P     V+ V+  
Sbjct: 311 IACGEFHTCAVTASGDLYNWGDGSYNAGLLGHGIGASHWLP-KRVSGPLEGLQVLSVACG 369

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL------ 225
             H+A  + SG+VFT GD +    GH +     + P+ VE+L G    +V  G+      
Sbjct: 370 SWHSALAMSSGKVFTFGDGTFGALGHGNRENVAY-PKEVESLSGFRTMKVACGVWHSAAI 428

Query: 226 ----NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 281
               + TG   +   + T G     +LGHGD   R  P  +  L +  +  Q+A G S  
Sbjct: 429 VETTSQTGVNMVSRKLFTWGDGDKNRLGHGDKEARLVPTVVQALVD-NNFHQVACGYSMT 487

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 341
           +A+  +G V++ GS +   LG+  + D  QP  +Q      + V  +S G  HV  L S 
Sbjct: 488 IALATSGHVFTMGSSNYGQLGN-PKADGKQPCQVQDKLSSEL-VEEISCGSYHVAVLTSR 545

Query: 342 GYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKS-HLAVQVCARKRKTFVLV 391
             VYTWG G  G LGHG   DK  P  + +LK  H+    C     T + +
Sbjct: 546 SEVYTWGMGANGRLGHGGIEDKKKPTIVDALKDRHVKSIACGSNFTTCICI 596



 Score = 82.0 bits (201), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 62/228 (27%), Positives = 109/228 (47%), Gaps = 20/228 (8%)

Query: 264 PLEE--VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRK 321
           PLE   V  V QI+ G  ++   T  G V+++G      LGHG   D  +P+ +++    
Sbjct: 247 PLESDVVLDVQQISCGSRHIALTTRQGEVFTWGEELGGRLGHGTDEDISRPKLVESLAVS 306

Query: 322 GIHVVRVSAGDEHVVALDSSGYVYTWGKGY--CGALGHGDEIDKTLPEPLS-SLKSHLAV 378
            +  +  + G+ H  A+ +SG +Y WG G    G LGHG      LP+ +S  L+    +
Sbjct: 307 NVEYI--ACGEFHTCAVTASGDLYNWGDGSYNAGLLGHGIGASHWLPKRVSGPLEGLQVL 364

Query: 379 QVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTG 438
            V      + + + +G V+ FG   FG+LG  +R   + V  P+ ++SL      +++ G
Sbjct: 365 SVACGSWHSALAMSSGKVFTFGDGTFGALGHGNR---ENVAYPKEVESLSGFRTMKVACG 421

Query: 439 LYHTVVVTDRG----------RLFGFGDNERAQLGHDTLRGCLEPTEI 476
           ++H+  + +            +LF +GD ++ +LGH      L PT +
Sbjct: 422 VWHSAAIVETTSQTGVNMVSRKLFTWGDGDKNRLGHGDKEARLVPTVV 469



 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 51/201 (25%), Positives = 87/201 (43%), Gaps = 8/201 (3%)

Query: 277 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVV 336
           G  Y+       V+ S GS +  C     + D L P+ +++     + V ++S G  H+ 
Sbjct: 214 GDVYVWGEVWTDVIPSEGSSNLVC----SKTDVLIPKPLES--DVVLDVQQISCGSRHIA 267

Query: 337 ALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSV 396
                G V+TWG+   G LGHG + D + P+ + SL       +   +  T  +  +G +
Sbjct: 268 LTTRQGEVFTWGEELGGRLGHGTDEDISRPKLVESLAVSNVEYIACGEFHTCAVTASGDL 327

Query: 397 YGFGWMGFGSLGFPDRGV-SDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFG 455
           Y +G  G  + G    G+ +   L  R+   L    V  ++ G +H+ +    G++F FG
Sbjct: 328 YNWG-DGSYNAGLLGHGIGASHWLPKRVSGPLEGLQVLSVACGSWHSALAMSSGKVFTFG 386

Query: 456 DNERAQLGHDTLRGCLEPTEI 476
           D     LGH        P E+
Sbjct: 387 DGTFGALGHGNRENVAYPKEV 407


>gi|348550629|ref|XP_003461134.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Cavia porcellus]
          Length = 4725

 Score =  121 bits (304), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 86/280 (30%), Positives = 139/280 (49%), Gaps = 9/280 (3%)

Query: 166  VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 225
            V V++   H   +   G+V++ G+      GH + + P  RPR++E+L+G+    V AG 
Sbjct: 3933 VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRS-PCDRPRVIESLRGIEVVDVAAGG 3991

Query: 226  NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA--AGPSYMLA 283
              +  +T  G ++T G   +G+LGH D+ D+  PK +  L+    VV IA  +G +  L 
Sbjct: 3992 AHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEVLQG-HRVVDIACGSGDAQTLC 4050

Query: 284  VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 343
            +T +  V+S+G G    LG G       P  I +    G+ VV+V  G +  VAL  SG 
Sbjct: 4051 LTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL--TGLGVVKVECGSQFSVALTKSGA 4108

Query: 344  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 403
            VYTWGKG    LGHG +     P  +  L+    + +           + G VY +G   
Sbjct: 4109 VYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDND 4168

Query: 404  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV 443
             G LG    G ++ + RPR++ +L+   V++++ G  HT+
Sbjct: 4169 EGQLG---DGTTNAIQRPRLVAALQGKKVNRVACGSAHTL 4205



 Score =  121 bits (304), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 82/269 (30%), Positives = 131/269 (48%), Gaps = 6/269 (2%)

Query: 207  PRLVEALKGVPCKQV--TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP 264
            P L+E+++ V  K+V   +G      L+  G V++ G    G+LGHG+      P+ I  
Sbjct: 3919 PTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIES 3978

Query: 265  LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH 324
            L  +  VV +AAG ++   VT  G +Y++G G    LGH +  D+L+P+ ++  +   + 
Sbjct: 3979 LRGI-EVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEVLQGHRVV 4037

Query: 325  VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARK 384
             +   +GD   + L     V++WG G  G LG G      +P  + SL     V+V    
Sbjct: 4038 DIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGS 4097

Query: 385  RKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV 444
            + +  L  +G+VY +G   +  LG    G  D V RPR +  L+   V  I+TG  H V 
Sbjct: 4098 QFSVALTKSGAVYTWGKGDYHRLG---HGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 4154

Query: 445  VTDRGRLFGFGDNERAQLGHDTLRGCLEP 473
             T+ G ++ +GDN+  QLG  T      P
Sbjct: 4155 CTEDGEVYTWGDNDEGQLGDGTTNAIQRP 4183



 Score =  118 bits (296), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 92/298 (30%), Positives = 146/298 (48%), Gaps = 11/298 (3%)

Query: 161  SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQ 220
            S+  +++  A+   +A  +++ +VF  G N     G    ++ I  P   E L  +   Q
Sbjct: 2940 SSGSLIRKKAAGLESAATIRT-KVFVWGLNDKDQLGGLKGSK-IKVPSFSETLSALNVVQ 2997

Query: 221  VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHG-DTLDRPTPKSIAPLEE-VGSVVQIAAGP 278
            V  G      +T+ G V+ CG  T+G+LG G  +   P P+ I  L   V   V + +G 
Sbjct: 2998 VAGGSKSLFAVTVEGKVYACGEATNGRLGLGLSSGTVPIPRQITALSSYVVKKVAVHSGG 3057

Query: 279  SYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
             +  A+T +G V+S+G G +  LGH  + +  +PR I+  + K I    ++ G  H  AL
Sbjct: 3058 RHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIR--DIACGSSHSAAL 3115

Query: 339  DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVC--ARKRKTFVLVDTGSV 396
             SSG +YTWG G  G LGHGD   +  P+ +  L  H  +QV   +R  +T  L D G V
Sbjct: 3116 TSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLV 3175

Query: 397  YGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 454
            + +G   FG LG   RG S+    P+ ++ L    V QI  G   ++ +T  G ++ +
Sbjct: 3176 FSWGDGDFGKLG---RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTW 3230



 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 92/311 (29%), Positives = 151/311 (48%), Gaps = 24/311 (7%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V Q++ +E     + ++G+V+T   NS       DT      P+LV+ L      ++ A 
Sbjct: 454 VTQIACAEKRFLILSRNGRVYTQAYNS-------DT----LAPQLVQGLASRNIVKIAAH 502

Query: 225 LNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGS-VVQIAAGPS 279
            +   +L +   G V++ G    G+LGHGDTL    PK I+    ++ G  VV IA G +
Sbjct: 503 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTLPLEEPKVISAFSGKQGGKHVVHIACGST 562

Query: 280 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS--AGDEHVVA 337
           Y  A+T  G +Y++G G+   LGHG   DE  P  +     KG+ V+ V+  +GD   +A
Sbjct: 563 YSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGL--KGLKVIDVACGSGDAQTLA 620

Query: 338 LDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVY 397
           +  +G V++WG G  G LG G       P+ +  L+    ++V    + +  L   G VY
Sbjct: 621 VTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVIKVRCGSQFSIALTKDGQVY 680

Query: 398 GFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDN 457
            +G      LG    G  + V  P++L+ L+   V  ++ G  H + +T+   +  +G N
Sbjct: 681 SWGKGDNQRLG---HGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSN 737

Query: 458 ERAQLGHDTLR 468
           ++ Q   DTLR
Sbjct: 738 DQCQ-HFDTLR 747



 Score =  102 bits (254), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 80/264 (30%), Positives = 122/264 (46%), Gaps = 15/264 (5%)

Query: 219  KQVTAGLNFTGFLTIRGHVHTCGSNTHGQLG--HGDTLDRPT-PKSIAPLEEVGSVVQIA 275
            ++  AGL      TIR  V   G N   QLG   G  +  P+  ++++ L    +VVQ+A
Sbjct: 2946 RKKAAGLESAA--TIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSAL----NVVQVA 2999

Query: 276  AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQ-PRAIQTFRRKGIHVVRVSAGDEH 334
             G   + AVT  G VY+ G  +N  LG G     +  PR I       +  V V +G  H
Sbjct: 3000 GGSKSLFAVTVEGKVYACGEATNGRLGLGLSSGTVPIPRQITALSSYVVKKVAVHSGGRH 3059

Query: 335  VVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 394
              AL   G V++WG+G  G LGH   ++   P  + +LK+     +      +  L  +G
Sbjct: 3060 ATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSG 3119

Query: 395  SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLY--HTVVVTDRGRLF 452
             +Y +G   +G LG  D       L+P+++  L  H V Q++ G     T+ +TD G +F
Sbjct: 3120 ELYTWGLGEYGRLGHGDNTTQ---LKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVF 3176

Query: 453  GFGDNERAQLGHDTLRGCLEPTEI 476
             +GD +  +LG     GC  P  I
Sbjct: 3177 SWGDGDFGKLGRGGSEGCNIPQNI 3200



 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 83/265 (31%), Positives = 125/265 (47%), Gaps = 12/265 (4%)

Query: 96   FLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFT 155
             L+S++H    ++  A N   + G++   L S   V+S G +  G LGHG   + C    
Sbjct: 3921 LLESIQHV--FIKKVAVN---SGGKHCLALSSEGEVYSWGEAEDGKLGHG-NRSPCDRPR 3974

Query: 156  RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 215
             I       VV V+A   H+A V  +G ++T G       GH D+   + +P+LVE L+G
Sbjct: 3975 VIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQL-KPKLVEVLQG 4033

Query: 216  VPCKQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
                 +   +G   T  LT    V + G   +G+LG G +     P  I  L  +G VV+
Sbjct: 4034 HRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLG-VVK 4092

Query: 274  IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
            +  G  + +A+T +G VY++G G    LGHG      +PR +Q    +G  V+ ++ G  
Sbjct: 4093 VECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGL--QGKKVIAIATGSL 4150

Query: 334  HVVALDSSGYVYTWGKGYCGALGHG 358
            H V     G VYTWG    G LG G
Sbjct: 4151 HCVCCTEDGEVYTWGDNDEGQLGDG 4175



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 76/247 (30%), Positives = 124/247 (50%), Gaps = 12/247 (4%)

Query: 235  GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
            G ++  G N  GQLG   G  +  PTP +++A L  +    Q+  G   + AVT +G +Y
Sbjct: 3843 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPI----QLIGGEQTLFAVTADGKLY 3898

Query: 292  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 351
            + G G+   LG G       P  +++ +   I  V V++G +H +AL S G VY+WG+  
Sbjct: 3899 ATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAE 3958

Query: 352  CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 411
             G LGHG+      P  + SL+    V V A    +  +   G +Y +G   +G LG  D
Sbjct: 3959 DGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD 4018

Query: 412  RGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG 469
               S+  L+P++++ L+ H V  I+  +G   T+ +TD   ++ +GD +  +LG     G
Sbjct: 4019 ---SEDQLKPKLVEVLQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDG 4075

Query: 470  CLEPTEI 476
            C  P +I
Sbjct: 4076 CKVPMKI 4082



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 87/328 (26%), Positives = 148/328 (45%), Gaps = 26/328 (7%)

Query: 50  PQKFRSLVDLAASQLCALHSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVET 109
           P +   L +L  +Q+      +  +SRN ++    +   +     + +Q +  S +IV+ 
Sbjct: 443 PIQCEGLANLGVTQIACAEKRFLILSRNGRV--YTQAYNSDTLAPQLVQGLA-SRNIVKI 499

Query: 110 SAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSA 162
           +A     + G ++  L +   V+S G    G LGHG       P+     S  +      
Sbjct: 500 AAH----SDGHHYLALAATGEVYSWGCGDGGRLGHGDTLPLEEPKVISAFSGKQ----GG 551

Query: 163 AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 222
            HVV ++    ++A +   G+++T G  +    GH  +      P LV  LKG+    V 
Sbjct: 552 KHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVA 610

Query: 223 AGLNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 280
            G      L +   G V + G   +G+LG G +    TPK I  L+++  V+++  G  +
Sbjct: 611 CGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL-DVIKVRCGSQF 669

Query: 281 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 340
            +A+T +G VYS+G G N  LGHG +     P+ ++    +G  V+ V+AG  H +AL  
Sbjct: 670 SIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGL--QGKKVIDVAAGSTHCLALTE 727

Query: 341 SGYVYTWGKGYCGALGHGDEIDKTLPEP 368
              V++WG        H D +  T PEP
Sbjct: 728 DSEVHSWGSN--DQCQHFDTLRVTKPEP 753



 Score = 61.6 bits (148), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 55/177 (31%), Positives = 81/177 (45%), Gaps = 5/177 (2%)

Query: 119  GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
            GR+ T L  +  VFS G    G LGH      C     I       +  ++   +H+A +
Sbjct: 3057 GRHATALTVDGKVFSWGEGDDGKLGHF-SRMNCDKPRLIEALKTKRIRDIACGSSHSAAL 3115

Query: 179  LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN--FTGFLTIRGH 236
              SG+++T G       GH D N    +P++V+ L G    QV  G     T  LT  G 
Sbjct: 3116 TSSGELYTWGLGEYGRLGHGD-NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 3174

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
            V + G    G+LG G +     P++I  L   G V QI  G  + LA+T +GVV+++
Sbjct: 3175 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTW 3230



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 50/167 (29%), Positives = 76/167 (45%), Gaps = 4/167 (2%)

Query: 118  TGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
            +G   TL L  + +V+S G    G LG G  +  C    +I+  +   VV+V      + 
Sbjct: 4043 SGDAQTLCLTDDDTVWSWGDGDYGKLGRG-GSDGCKVPMKIDSLTGLGVVKVECGSQFSV 4101

Query: 177  FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
             + +SG V+T G       GH   +  + RPR V+ L+G     +  G       T  G 
Sbjct: 4102 ALTKSGAVYTWGKGDYHRLGHGSDDH-VRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGE 4160

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
            V+T G N  GQLG G T     P+ +A L+    V ++A G ++ LA
Sbjct: 4161 VYTWGDNDEGQLGDGTTNAIQRPRLVAALQG-KKVNRVACGSAHTLA 4206



 Score = 51.6 bits (122), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 35/147 (23%), Positives = 71/147 (48%), Gaps = 5/147 (3%)

Query: 332  DEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 391
            D+  ++   SG +Y WG  + G LG  +     +P P  +L +   +Q+   ++  F + 
Sbjct: 3833 DDWTLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPIQLIGGEQTLFAVT 3892

Query: 392  DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRG 449
              G +Y     G+G+ G    G ++ V  P +L+S++   + +++  +G  H + ++  G
Sbjct: 3893 ADGKLYA---TGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 3949

Query: 450  RLFGFGDNERAQLGHDTLRGCLEPTEI 476
             ++ +G+ E  +LGH     C  P  I
Sbjct: 3950 EVYSWGEAEDGKLGHGNRSPCDRPRVI 3976


>gi|219847606|ref|YP_002462039.1| chromosome condensation regulator RCC1 [Chloroflexus aggregans DSM
           9485]
 gi|219541865|gb|ACL23603.1| regulator of chromosome condensation RCC1 [Chloroflexus aggregans
           DSM 9485]
          Length = 784

 Score =  121 bits (304), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 112/356 (31%), Positives = 159/356 (44%), Gaps = 19/356 (5%)

Query: 111 AGNMQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS 169
           +G   I  G YHT  ++ S  V+  G +  G LG G  T +         PS   V  ++
Sbjct: 417 SGVTAIAAGNYHTCALTGSDGVWCWGDNFYGQLGDGTTTNRSTPGAVSGLPSG--VTAIA 474

Query: 170 ASENHAAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEAL-KGVPCKQVTAGLNF 227
           A   H   +  SG V+  G N S   G    TNR    P  V  L  GV    + AG   
Sbjct: 475 AGNYHTCALTSSGGVWCWGRNDSGQLGDGTTTNRST--PGAVGGLPSGV--TAIAAGDYH 530

Query: 228 TGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN 287
           T  L   G V   G N  GQLG G   D  TP ++  L     V+ IAAG  +  A+TG+
Sbjct: 531 TCALMSSGGVWCWGLNNRGQLGDGSYTDSSTPVAVGGLPS--GVMAIAAGNYHTCALTGS 588

Query: 288 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 347
             V+ +G+ S+  LG G   +   P A+         V  ++AG+ H  AL SSG V+ W
Sbjct: 589 DGVWCWGTNSDGQLGDGTTTNRSTPVAVSGLPSG---VTAIAAGNYHTCALTSSGGVWCW 645

Query: 348 GKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSL 407
           G    G LG G   +++ P  +S L S +   + A    T  L  +G V+ +G   +G L
Sbjct: 646 GYNLSGQLGDGTTTNRSTPGAVSGLPSGV-TAIAAGDEHTCALTGSGGVWCWGDNYYGQL 704

Query: 408 GFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 463
           G    G +     P  +  L +  V+ I+ G+YHT  +T  G +  +G+N   QLG
Sbjct: 705 G---DGTTTNRSTPGAVSGLPSG-VTAIAAGVYHTCALTGSGGVMCWGNNGDGQLG 756



 Score =  118 bits (295), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 116/383 (30%), Positives = 165/383 (43%), Gaps = 21/383 (5%)

Query: 89  NWKRVLRFLQSVEHSSDIVETS--AGNMQITTGRYHTL-LISNSSVFSCGSSLCGVLGHG 145
           NW   L      + S+ +  +   +G   I  G  HT  L S+  V   G +  G LG G
Sbjct: 87  NWSGQLGDGSYTDRSTPVAVSGLPSGVTAIAAGGAHTCALTSSGGVMCWGGNYFGQLGDG 146

Query: 146 PETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIF 205
             T +         PS   V  ++A   H   ++ SG V+  G N S   G       I+
Sbjct: 147 SYTDRSTPVAVSGLPSG--VTAIAAGGAHTCALMSSGGVWCWGYNLS---GQLGDGSTIY 201

Query: 206 RPRLVEALKGVPCK--QVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 263
               V A+ G+P +   + AG   T  LT  G V   G N  GQLG G   D  TP ++ 
Sbjct: 202 HITPV-AVSGLPSEVTAIAAGYAHTCALTGSGGVWCWGDNGFGQLGDGSFTDSSTPAAVG 260

Query: 264 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGI 323
            L     V  IAAG  Y  A+T +G V+ +G   +  LG G   +   P A+        
Sbjct: 261 GLPS--GVTAIAAGGRYTCALTSSGGVWCWGRNDSGQLGDGSFTNRSTPGAVGGLPSG-- 316

Query: 324 HVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCAR 383
            V  ++AG  H  AL SSG V+ WG    G LG G   D++ P  +S L S +   + A 
Sbjct: 317 -VTAIAAGGAHTCALTSSGGVWCWGGNDSGQLGDGSYTDRSTPGAVSGLPSGV-TAIAAG 374

Query: 384 KRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV 443
              T     +G V+ +G   +G LG  D   +D+   P  +  L +  V+ I+ G YHT 
Sbjct: 375 GAHTCARTSSGGVWCWGGNFYGQLG--DGTTTDRS-TPGAVSGLPS-GVTAIAAGNYHTC 430

Query: 444 VVTDRGRLFGFGDNERAQLGHDT 466
            +T    ++ +GDN   QLG  T
Sbjct: 431 ALTGSDGVWCWGDNFYGQLGDGT 453



 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 108/353 (30%), Positives = 155/353 (43%), Gaps = 24/353 (6%)

Query: 119 GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
           GRY   L S+  V+  G +  G LG G  T +         PS   V  ++A   H   +
Sbjct: 273 GRYTCALTSSGGVWCWGRNDSGQLGDGSFTNRSTPGAVGGLPSG--VTAIAAGGAHTCAL 330

Query: 179 LQSGQVFTCGDNSSFCCG---HRDTNRPIFRPRLVEALKGVPC--KQVTAGLNFTGFLTI 233
             SG V+  G N S   G   + D + P        A+ G+P     + AG   T   T 
Sbjct: 331 TSSGGVWCWGGNDSGQLGDGSYTDRSTP-------GAVSGLPSGVTAIAAGGAHTCARTS 383

Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
            G V   G N +GQLG G T DR TP +++ L     V  IAAG  +  A+TG+  V+ +
Sbjct: 384 SGGVWCWGGNFYGQLGDGTTTDRSTPGAVSGLPS--GVTAIAAGNYHTCALTGSDGVWCW 441

Query: 294 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 353
           G      LG G   +   P A+         V  ++AG+ H  AL SSG V+ WG+   G
Sbjct: 442 GDNFYGQLGDGTTTNRSTPGAVSGLPSG---VTAIAAGNYHTCALTSSGGVWCWGRNDSG 498

Query: 354 ALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRG 413
            LG G   +++ P  +  L S +   + A    T  L+ +G V+ +G    G LG  D  
Sbjct: 499 QLGDGTTTNRSTPGAVGGLPSGV-TAIAAGDYHTCALMSSGGVWCWGLNNRGQLG--DGS 555

Query: 414 VSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDT 466
            +D    P  +  L +  V  I+ G YHT  +T    ++ +G N   QLG  T
Sbjct: 556 YTDSS-TPVAVGGLPSG-VMAIAAGNYHTCALTGSDGVWCWGTNSDGQLGDGT 606



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 112/369 (30%), Positives = 159/369 (43%), Gaps = 29/369 (7%)

Query: 116 ITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSA-----AHVVQVS 169
           I  G  HT  ++ S  V+  G +  G LG G       SFT  + P+A     + V  ++
Sbjct: 218 IAAGYAHTCALTGSGGVWCWGDNGFGQLGDG-------SFTDSSTPAAVGGLPSGVTAIA 270

Query: 170 ASENHAAFVLQSGQVFTCGDNSSFCCGHRD-TNRPIFRPRLVEAL-KGVPCKQVTAGLNF 227
           A   +   +  SG V+  G N S   G    TNR    P  V  L  GV    + AG   
Sbjct: 271 AGGRYTCALTSSGGVWCWGRNDSGQLGDGSFTNRST--PGAVGGLPSGV--TAIAAGGAH 326

Query: 228 TGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN 287
           T  LT  G V   G N  GQLG G   DR TP +++ L     V  IAAG ++  A T +
Sbjct: 327 TCALTSSGGVWCWGGNDSGQLGDGSYTDRSTPGAVSGLPS--GVTAIAAGGAHTCARTSS 384

Query: 288 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 347
           G V+ +G      LG G   D   P A+         V  ++AG+ H  AL  S  V+ W
Sbjct: 385 GGVWCWGGNFYGQLGDGTTTDRSTPGAVSGLPSG---VTAIAAGNYHTCALTGSDGVWCW 441

Query: 348 GKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSL 407
           G  + G LG G   +++ P  +S L S +   + A    T  L  +G V+ +G    G L
Sbjct: 442 GDNFYGQLGDGTTTNRSTPGAVSGLPSGV-TAIAAGNYHTCALTSSGGVWCWGRNDSGQL 500

Query: 408 GFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTL 467
           G    G +     P  +  L +  V+ I+ G YHT  +   G ++ +G N R QLG  + 
Sbjct: 501 G---DGTTTNRSTPGAVGGLPS-GVTAIAAGDYHTCALMSSGGVWCWGLNNRGQLGDGSY 556

Query: 468 RGCLEPTEI 476
                P  +
Sbjct: 557 TDSSTPVAV 565



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 110/359 (30%), Positives = 154/359 (42%), Gaps = 19/359 (5%)

Query: 111 AGNMQITTGRYHTLL-ISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS 169
           +G   I  G  HT    S+  V+  G +  G LG G  T +         PS   V  ++
Sbjct: 366 SGVTAIAAGGAHTCARTSSGGVWCWGGNFYGQLGDGTTTDRSTPGAVSGLPSG--VTAIA 423

Query: 170 ASENHAAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEAL-KGVPCKQVTAGLNF 227
           A   H   +  S  V+  GDN     G    TNR    P  V  L  GV    + AG   
Sbjct: 424 AGNYHTCALTGSDGVWCWGDNFYGQLGDGTTTNRST--PGAVSGLPSGV--TAIAAGNYH 479

Query: 228 TGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN 287
           T  LT  G V   G N  GQLG G T +R TP ++  L     V  IAAG  +  A+  +
Sbjct: 480 TCALTSSGGVWCWGRNDSGQLGDGTTTNRSTPGAVGGLPS--GVTAIAAGDYHTCALMSS 537

Query: 288 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 347
           G V+ +G  +   LG G   D   P A+         V+ ++AG+ H  AL  S  V+ W
Sbjct: 538 GGVWCWGLNNRGQLGDGSYTDSSTPVAVGGLPSG---VMAIAAGNYHTCALTGSDGVWCW 594

Query: 348 GKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSL 407
           G    G LG G   +++ P  +S L S +   + A    T  L  +G V+ +G+   G L
Sbjct: 595 GTNSDGQLGDGTTTNRSTPVAVSGLPSGV-TAIAAGNYHTCALTSSGGVWCWGYNLSGQL 653

Query: 408 GFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDT 466
           G    G +     P  +  L +  V+ I+ G  HT  +T  G ++ +GDN   QLG  T
Sbjct: 654 G---DGTTTNRSTPGAVSGLPSG-VTAIAAGDEHTCALTGSGGVWCWGDNYYGQLGDGT 708



 Score =  103 bits (256), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 111/359 (30%), Positives = 154/359 (42%), Gaps = 19/359 (5%)

Query: 111 AGNMQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS 169
           +G   I  G  HT  L S+  V+  G +  G LG G  T +         PS   V  ++
Sbjct: 315 SGVTAIAAGGAHTCALTSSGGVWCWGGNDSGQLGDGSYTDRSTPGAVSGLPSG--VTAIA 372

Query: 170 ASENHAAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEAL-KGVPCKQVTAGLNF 227
           A   H      SG V+  G N     G    T+R    P  V  L  GV    + AG   
Sbjct: 373 AGGAHTCARTSSGGVWCWGGNFYGQLGDGTTTDRST--PGAVSGLPSGV--TAIAAGNYH 428

Query: 228 TGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN 287
           T  LT    V   G N +GQLG G T +R TP +++ L     V  IAAG  +  A+T +
Sbjct: 429 TCALTGSDGVWCWGDNFYGQLGDGTTTNRSTPGAVSGLPS--GVTAIAAGNYHTCALTSS 486

Query: 288 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 347
           G V+ +G   +  LG G   +   P A+         V  ++AGD H  AL SSG V+ W
Sbjct: 487 GGVWCWGRNDSGQLGDGTTTNRSTPGAVGGLPSG---VTAIAAGDYHTCALMSSGGVWCW 543

Query: 348 GKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSL 407
           G    G LG G   D + P  +  L S + + + A    T  L  +  V+ +G    G L
Sbjct: 544 GLNNRGQLGDGSYTDSSTPVAVGGLPSGV-MAIAAGNYHTCALTGSDGVWCWGTNSDGQL 602

Query: 408 GFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDT 466
           G    G +     P  +  L +  V+ I+ G YHT  +T  G ++ +G N   QLG  T
Sbjct: 603 G---DGTTTNRSTPVAVSGLPSG-VTAIAAGNYHTCALTSSGGVWCWGYNLSGQLGDGT 657



 Score = 97.4 bits (241), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 85/251 (33%), Positives = 116/251 (46%), Gaps = 12/251 (4%)

Query: 213 LKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV 272
           L+GV    + AG   T  LT  G V   G N  GQLG G   DR TP +++ L     V 
Sbjct: 59  LQGV--TAIAAGSWHTCALTGSGEVWCWGYNWSGQLGDGSYTDRSTPVAVSGLPS--GVT 114

Query: 273 QIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGD 332
            IAAG ++  A+T +G V  +G      LG G   D   P A+         V  ++AG 
Sbjct: 115 AIAAGGAHTCALTSSGGVMCWGGNYFGQLGDGSYTDRSTPVAVSGLPSG---VTAIAAGG 171

Query: 333 EHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVD 392
            H  AL SSG V+ WG    G LG G  I    P  +S L S +   + A    T  L  
Sbjct: 172 AHTCALMSSGGVWCWGYNLSGQLGDGSTIYHITPVAVSGLPSEV-TAIAAGYAHTCALTG 230

Query: 393 TGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLF 452
           +G V+ +G  GFG LG  D   +D    P  +  L +  V+ I+ G  +T  +T  G ++
Sbjct: 231 SGGVWCWGDNGFGQLG--DGSFTDSS-TPAAVGGLPS-GVTAIAAGGRYTCALTSSGGVW 286

Query: 453 GFGDNERAQLG 463
            +G N+  QLG
Sbjct: 287 CWGRNDSGQLG 297



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 68/217 (31%), Positives = 101/217 (46%), Gaps = 11/217 (5%)

Query: 260 KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFR 319
            S +PL+    V  IAAG  +  A+TG+G V+ +G   +  LG G   D   P A+    
Sbjct: 54  SSFSPLQ---GVTAIAAGSWHTCALTGSGEVWCWGYNWSGQLGDGSYTDRSTPVAVSGLP 110

Query: 320 RKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQ 379
                V  ++AG  H  AL SSG V  WG  Y G LG G   D++ P  +S L S +   
Sbjct: 111 SG---VTAIAAGGAHTCALTSSGGVMCWGGNYFGQLGDGSYTDRSTPVAVSGLPSGV-TA 166

Query: 380 VCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGL 439
           + A    T  L+ +G V+ +G+   G LG    G +   + P  +  L +  V+ I+ G 
Sbjct: 167 IAAGGAHTCALMSSGGVWCWGYNLSGQLG---DGSTIYHITPVAVSGLPS-EVTAIAAGY 222

Query: 440 YHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 476
            HT  +T  G ++ +GDN   QLG  +      P  +
Sbjct: 223 AHTCALTGSGGVWCWGDNGFGQLGDGSFTDSSTPAAV 259



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 86/259 (33%), Positives = 112/259 (43%), Gaps = 14/259 (5%)

Query: 111 AGNMQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS 169
           +G   I  G YHT  L+S+  V+  G +  G LG G  T           PS   V+ ++
Sbjct: 519 SGVTAIAAGDYHTCALMSSGGVWCWGLNNRGQLGDGSYTDSSTPVAVGGLPSG--VMAIA 576

Query: 170 ASENHAAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEAL-KGVPCKQVTAGLNF 227
           A   H   +  S  V+  G NS    G    TNR    P  V  L  GV    + AG   
Sbjct: 577 AGNYHTCALTGSDGVWCWGTNSDGQLGDGTTTNRST--PVAVSGLPSGV--TAIAAGNYH 632

Query: 228 TGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN 287
           T  LT  G V   G N  GQLG G T +R TP +++ L     V  IAAG  +  A+TG+
Sbjct: 633 TCALTSSGGVWCWGYNLSGQLGDGTTTNRSTPGAVSGLPS--GVTAIAAGDEHTCALTGS 690

Query: 288 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 347
           G V+ +G      LG G   +   P A+         V  ++AG  H  AL  SG V  W
Sbjct: 691 GGVWCWGDNYYGQLGDGTTTNRSTPGAVSGLPSG---VTAIAAGVYHTCALTGSGGVMCW 747

Query: 348 GKGYCGALGHGDEIDKTLP 366
           G    G LG G  + +T P
Sbjct: 748 GNNGDGQLGDGRPLYRTTP 766



 Score = 72.8 bits (177), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 71/221 (32%), Positives = 99/221 (44%), Gaps = 11/221 (4%)

Query: 111 AGNMQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS 169
           +G M I  G YHT  ++ S  V+  G++  G LG G  T +         PS   V  ++
Sbjct: 570 SGVMAIAAGNYHTCALTGSDGVWCWGTNSDGQLGDGTTTNRSTPVAVSGLPSG--VTAIA 627

Query: 170 ASENHAAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEAL-KGVPCKQVTAGLNF 227
           A   H   +  SG V+  G N S   G    TNR    P  V  L  GV    + AG   
Sbjct: 628 AGNYHTCALTSSGGVWCWGYNLSGQLGDGTTTNRST--PGAVSGLPSGV--TAIAAGDEH 683

Query: 228 TGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN 287
           T  LT  G V   G N +GQLG G T +R TP +++ L     V  IAAG  +  A+TG+
Sbjct: 684 TCALTGSGGVWCWGDNYYGQLGDGTTTNRSTPGAVSGLPS--GVTAIAAGVYHTCALTGS 741

Query: 288 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRV 328
           G V  +G+  +  LG G       P  + T    G+++  +
Sbjct: 742 GGVMCWGNNGDGQLGDGRPLYRTTPVDVVTSASWGVYLPMI 782


>gi|301615126|ref|XP_002937025.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein ligase
            HERC2-like [Xenopus (Silurana) tropicalis]
          Length = 4845

 Score =  121 bits (304), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 83/280 (29%), Positives = 138/280 (49%), Gaps = 9/280 (3%)

Query: 166  VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 225
            V V++   H   +   G+V++ G+      GH + + P  RPR++E+L+G     + AG 
Sbjct: 4055 VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRS-PCDRPRVIESLRGTEVVDIAAGG 4113

Query: 226  NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA--AGPSYMLA 283
              +  +T  G ++T G   +G+LGHGD+ D+  PK +  L+    V+ IA  +G +  L 
Sbjct: 4114 AHSACITAAGELYTWGKGRYGRLGHGDSEDQLKPKLVEALQGY-RVIDIACGSGDAQTLC 4172

Query: 284  VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 343
            +T +  V+S+G G    LG G       P  I +    G+ V +V  G +  VAL  SG 
Sbjct: 4173 LTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL--TGVGVTKVECGSQFSVALTKSGA 4230

Query: 344  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 403
            VYTWGKG    LGHG +     P  +  L+    + +           + G VY +G   
Sbjct: 4231 VYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDND 4290

Query: 404  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV 443
             G LG    G ++ + RPR++ +L+   +++++ G  HT+
Sbjct: 4291 EGQLG---DGTTNAIQRPRLVAALQGKKINRVACGSAHTL 4327



 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 82/269 (30%), Positives = 130/269 (48%), Gaps = 6/269 (2%)

Query: 207  PRLVEALKGVPCKQV--TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP 264
            P L+E+++ V  K+V   +G      L+  G V++ G    G+LGHG+      P+ I  
Sbjct: 4041 PTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIES 4100

Query: 265  LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH 324
            L     VV IAAG ++   +T  G +Y++G G    LGHG+  D+L+P+ ++  +   + 
Sbjct: 4101 LRGT-EVVDIAAGGAHSACITAAGELYTWGKGRYGRLGHGDSEDQLKPKLVEALQGYRVI 4159

Query: 325  VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARK 384
             +   +GD   + L     V++WG G  G LG G      +P  + SL      +V    
Sbjct: 4160 DIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGVGVTKVECGS 4219

Query: 385  RKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV 444
            + +  L  +G+VY +G   +  LG    G  D V RPR +  L+   V  I+TG  H V 
Sbjct: 4220 QFSVALTKSGAVYTWGKGDYHRLG---HGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 4276

Query: 445  VTDRGRLFGFGDNERAQLGHDTLRGCLEP 473
             T+ G ++ +GDN+  QLG  T      P
Sbjct: 4277 CTEDGEVYTWGDNDEGQLGDGTTNAIQRP 4305



 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 88/276 (31%), Positives = 133/276 (48%), Gaps = 10/276 (3%)

Query: 183  QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 242
            +VF  G N     G    ++ I  P   E L  +   QV  G      +T  G V+ CG 
Sbjct: 2964 KVFVWGLNDKDQLGGLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTAEGKVYACGE 3022

Query: 243  NTHGQLGHG-DTLDRPTPKSIAPLEE-VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 300
             T+G+LG G  +   P P+ I  L   V   V + +G  +  A+T +G V+S+G G +  
Sbjct: 3023 ATNGRLGLGISSGTVPIPRQITALSNYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGK 3082

Query: 301  LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 360
            LGH  + +  +PR I+  + K I    ++ G  H  A+ SSG +YTWG G  G LGHGD 
Sbjct: 3083 LGHFSRMNCDKPRLIEALKTKRIR--DIACGSSHSAAITSSGELYTWGLGEYGRLGHGDN 3140

Query: 361  IDKTLPEPLSSLKSHLAVQVC--ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKV 418
              +  P+ +  L  H  +QV   +R  +T  L D G V+ +G   FG LG   RG S+  
Sbjct: 3141 TTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLG---RGGSEGC 3197

Query: 419  LRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 454
              P+ ++ L    V QI  G   ++ +T  G ++ +
Sbjct: 3198 NIPQNIERLNGQAVCQIECGAQFSLALTKSGVVWTW 3233



 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 86/311 (27%), Positives = 152/311 (48%), Gaps = 24/311 (7%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V QV+ +E     + ++G+++T   N++              P+LV+ L      ++ A 
Sbjct: 453 VTQVACAEKCFLILSRNGKLYTQAYNNN-----------TLGPQLVQGLASRNIVKIAAH 501

Query: 225 LNFTGFLTIRG--HVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGS-VVQIAAGPS 279
            +   +L +     + + G    G+LGHGDT+    PK ++ L  ++ G  V+ IA G +
Sbjct: 502 PDGQHYLALSATSELFSWGCGDGGRLGHGDTVSLEEPKLVSALSGKQTGKQVIHIACGST 561

Query: 280 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS--AGDEHVVA 337
           Y  A+T +G +Y++G G+   LGHG   D+  P  +     KG+ VV VS  +GD   ++
Sbjct: 562 YSAAITADGELYTWGRGNYGRLGHGSSEDQTVPMLVTGL--KGLKVVDVSCGSGDAQTLS 619

Query: 338 LDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVY 397
           +  +G V++WG G  G LG G       P+ +  L+    V+V    + +  +   G VY
Sbjct: 620 VTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDIVKVRCGSQFSIAITKDGQVY 679

Query: 398 GFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDN 457
            +G      LG    G  + V  P+I++ L+   V  ++ G  H + +T+ G ++ +G N
Sbjct: 680 SWGKGDNQRLG---HGTEEHVRYPKIMNGLQGKKVVDVAVGSTHCLALTESGEVYSWGSN 736

Query: 458 ERAQLGHDTLR 468
           ++ Q   DTLR
Sbjct: 737 DQCQ-HFDTLR 746



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 81/264 (30%), Positives = 124/264 (46%), Gaps = 15/264 (5%)

Query: 219  KQVTAGLNFTGFLTIRGHVHTCGSNTHGQLG--HGDTLDRPT-PKSIAPLEEVGSVVQIA 275
            ++ TAGL  T   TIR  V   G N   QLG   G  +  P+  ++++ L    +VVQ+A
Sbjct: 2949 RKKTAGLESTA--TIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSAL----NVVQVA 3002

Query: 276  AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQ-PRAIQTFRRKGIHVVRVSAGDEH 334
             G   + AVT  G VY+ G  +N  LG G     +  PR I       +  V V +G  H
Sbjct: 3003 GGSKSLFAVTAEGKVYACGEATNGRLGLGISSGTVPIPRQITALSNYVVKKVAVHSGGRH 3062

Query: 335  VVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 394
              AL   G V++WG+G  G LGH   ++   P  + +LK+     +      +  +  +G
Sbjct: 3063 ATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSG 3122

Query: 395  SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLY--HTVVVTDRGRLF 452
             +Y +G   +G LG  D       L+P+++  L  H V Q++ G     T+ +TD G +F
Sbjct: 3123 ELYTWGLGEYGRLGHGDNTTQ---LKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVF 3179

Query: 453  GFGDNERAQLGHDTLRGCLEPTEI 476
             +GD +  +LG     GC  P  I
Sbjct: 3180 SWGDGDFGKLGRGGSEGCNIPQNI 3203



 Score =  102 bits (253), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 100/363 (27%), Positives = 159/363 (43%), Gaps = 39/363 (10%)

Query: 50  PQKFRSLVDLAASQLCALHSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVET 109
           P +  +L +L  +Q+      +  +SRN +  L  +   N     + +Q +  S +IV+ 
Sbjct: 442 PIQCEALANLGVTQVACAEKCFLILSRNGK--LYTQAYNNNTLGPQLVQGLA-SRNIVKI 498

Query: 110 SAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSA------- 162
           +A       G+++  L + S +FS G    G LGHG      VS       SA       
Sbjct: 499 AAH----PDGQHYLALSATSELFSWGCGDGGRLGHG----DTVSLEEPKLVSALSGKQTG 550

Query: 163 AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 222
             V+ ++    ++A +   G+++T G  +    GH  +      P LV  LKG+    V+
Sbjct: 551 KQVIHIACGSTYSAAITADGELYTWGRGNYGRLGHGSSEDQTV-PMLVTGLKGLKVVDVS 609

Query: 223 AGLNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 280
            G      L++   G V + G   +G+LG G +    TPK I  L+++  +V++  G  +
Sbjct: 610 CGSGDAQTLSVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL-DIVKVRCGSQF 668

Query: 281 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 340
            +A+T +G VYS+G G N  LGHG +     P+ +     +G  VV V+ G  H +AL  
Sbjct: 669 SIAITKDGQVYSWGKGDNQRLGHGTEEHVRYPKIMNGL--QGKKVVDVAVGSTHCLALTE 726

Query: 341 SGYVYTWGKGYCGALGHGD--EIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYG 398
           SG VY+WG        H D   I K +P  L  L S           K  V +  G    
Sbjct: 727 SGEVYSWGSN--DQCQHFDTLRIAKPVPSVLPGLDS-----------KHIVGISCGPAQS 773

Query: 399 FGW 401
           F W
Sbjct: 774 FAW 776



 Score =  101 bits (252), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 82/265 (30%), Positives = 126/265 (47%), Gaps = 12/265 (4%)

Query: 96   FLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFT 155
             L+S++H    ++  A N   + G++   L S   V+S G +  G LGHG   + C    
Sbjct: 4043 LLESIQHV--FIKKVAVN---SGGKHCLALSSEGEVYSWGEAEDGKLGHG-NRSPCDRPR 4096

Query: 156  RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 215
             I       VV ++A   H+A +  +G+++T G       GH D+   + +P+LVEAL+G
Sbjct: 4097 VIESLRGTEVVDIAAGGAHSACITAAGELYTWGKGRYGRLGHGDSEDQL-KPKLVEALQG 4155

Query: 216  VPCKQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
                 +   +G   T  LT    V + G   +G+LG G +     P  I  L  VG V +
Sbjct: 4156 YRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGVG-VTK 4214

Query: 274  IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
            +  G  + +A+T +G VY++G G    LGHG      +PR +Q    +G  V+ ++ G  
Sbjct: 4215 VECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGL--QGKKVIAIATGSL 4272

Query: 334  HVVALDSSGYVYTWGKGYCGALGHG 358
            H V     G VYTWG    G LG G
Sbjct: 4273 HCVCCTEDGEVYTWGDNDEGQLGDG 4297



 Score = 99.0 bits (245), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 75/247 (30%), Positives = 125/247 (50%), Gaps = 12/247 (4%)

Query: 235  GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
            G ++  G N  GQLG   G  +  PTP +++A L  V    Q+  G   + AVT +G +Y
Sbjct: 3965 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPV----QLIGGEQTLFAVTADGKLY 4020

Query: 292  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 351
            + G G+   LG G       P  +++ +   I  V V++G +H +AL S G VY+WG+  
Sbjct: 4021 ATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAE 4080

Query: 352  CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 411
             G LGHG+      P  + SL+    V + A    +  +   G +Y +G   +G LG   
Sbjct: 4081 DGKLGHGNRSPCDRPRVIESLRGTEVVDIAAGGAHSACITAAGELYTWGKGRYGRLG--- 4137

Query: 412  RGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG 469
             G S+  L+P+++++L+ + V  I+  +G   T+ +TD   ++ +GD +  +LG     G
Sbjct: 4138 HGDSEDQLKPKLVEALQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDG 4197

Query: 470  CLEPTEI 476
            C  P +I
Sbjct: 4198 CKVPMKI 4204



 Score = 96.3 bits (238), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 72/245 (29%), Positives = 115/245 (46%), Gaps = 11/245 (4%)

Query: 161  SAAHVVQVSASENHAAFVLQSGQVFTCGD--NSSFCCGHRDTNRPIFRPRLVEALKGVPC 218
            SA +VVQV+        V   G+V+ CG+  N     G      PI  PR + AL     
Sbjct: 2994 SALNVVQVAGGSKSLFAVTAEGKVYACGEATNGRLGLGISSGTVPI--PRQITALSNYVV 3051

Query: 219  KQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA 276
            K+V   +G      LT+ G V + G    G+LGH   ++   P+ I  L+    +  IA 
Sbjct: 3052 KKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALK-TKRIRDIAC 3110

Query: 277  GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEH 334
            G S+  A+T +G +Y++G G    LGHG+   +L+P+ ++     G  V++V+ G  D  
Sbjct: 3111 GSSHSAAITSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLL--GHRVIQVACGSRDAQ 3168

Query: 335  VVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 394
             +AL   G V++WG G  G LG G      +P+ +  L      Q+    + +  L  +G
Sbjct: 3169 TLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQAVCQIECGAQFSLALTKSG 3228

Query: 395  SVYGF 399
             V+ +
Sbjct: 3229 VVWTW 3233



 Score = 68.9 bits (167), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 56/213 (26%), Positives = 95/213 (44%), Gaps = 21/213 (9%)

Query: 271 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 330
           V Q+A      L ++ NG +Y+    +N           L P+ +Q    + I  +    
Sbjct: 453 VTQVACAEKCFLILSRNGKLYTQAYNNN----------TLGPQLVQGLASRNIVKIAAHP 502

Query: 331 GDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK-SHLAVQV----CARKR 385
             +H +AL ++  +++WG G  G LGHGD +    P+ +S+L       QV    C    
Sbjct: 503 DGQHYLALSATSELFSWGCGDGGRLGHGDTVSLEEPKLVSALSGKQTGKQVIHIACGSTY 562

Query: 386 KTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTV 443
              +  D G +Y +G   +G LG    G S+    P ++  L+   V  +S  +G   T+
Sbjct: 563 SAAITAD-GELYTWGRGNYGRLG---HGSSEDQTVPMLVTGLKGLKVVDVSCGSGDAQTL 618

Query: 444 VVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 476
            VT+ G+++ +GD +  +LG     GC  P  I
Sbjct: 619 SVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLI 651



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 54/177 (30%), Positives = 81/177 (45%), Gaps = 5/177 (2%)

Query: 119  GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
            GR+ T L  +  VFS G    G LGH      C     I       +  ++   +H+A +
Sbjct: 3060 GRHATALTVDGKVFSWGEGDDGKLGHFSRMN-CDKPRLIEALKTKRIRDIACGSSHSAAI 3118

Query: 179  LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN--FTGFLTIRGH 236
              SG+++T G       GH D N    +P++V+ L G    QV  G     T  LT  G 
Sbjct: 3119 TSSGELYTWGLGEYGRLGHGD-NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 3177

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
            V + G    G+LG G +     P++I  L    +V QI  G  + LA+T +GVV+++
Sbjct: 3178 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNG-QAVCQIECGAQFSLALTKSGVVWTW 3233



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 47/205 (22%), Positives = 86/205 (41%), Gaps = 19/205 (9%)

Query: 278  PSYMLAVTGNGVVYSFGSGSNFCLGHGEQHD----ELQPRAIQTFRRKGIHVVRVSAGDE 333
            P   L      +        N   GH E HD    E   + +Q   R+          D+
Sbjct: 3907 PRQFLDEVAKKIRELMADNENMNAGH-ESHDTFKREQDEQLVQWMNRRP---------DD 3956

Query: 334  HVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDT 393
              ++   SG +Y WG  + G LG  +     +P P  +L +   VQ+   ++  F +   
Sbjct: 3957 WTLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTAD 4016

Query: 394  GSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRL 451
            G +Y     G+G+ G    G ++ V  P +L+S++   + +++  +G  H + ++  G +
Sbjct: 4017 GKLYA---TGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEV 4073

Query: 452  FGFGDNERAQLGHDTLRGCLEPTEI 476
            + +G+ E  +LGH     C  P  I
Sbjct: 4074 YSWGEAEDGKLGHGNRSPCDRPRVI 4098



 Score = 52.4 bits (124), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 48/167 (28%), Positives = 75/167 (44%), Gaps = 4/167 (2%)

Query: 118  TGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
            +G   TL L  + +V+S G    G LG G  +  C    +I+  +   V +V      + 
Sbjct: 4165 SGDAQTLCLTDDDTVWSWGDGDYGKLGRG-GSDGCKVPMKIDSLTGVGVTKVECGSQFSV 4223

Query: 177  FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
             + +SG V+T G       GH   +  + RPR V+ L+G     +  G       T  G 
Sbjct: 4224 ALTKSGAVYTWGKGDYHRLGHGSDDH-VRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGE 4282

Query: 237  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
            V+T G N  GQLG G T     P+ +A L+    + ++A G ++ LA
Sbjct: 4283 VYTWGDNDEGQLGDGTTNAIQRPRLVAALQG-KKINRVACGSAHTLA 4328


>gi|91202557|emb|CAJ72196.1| hypothetical protein kustd1451 [Candidatus Kuenenia
           stuttgartiensis]
          Length = 1413

 Score =  121 bits (304), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 104/372 (27%), Positives = 165/372 (44%), Gaps = 21/372 (5%)

Query: 115 QITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
           QI+ G YHTL L  + +V++ G++    LG G  T    S T +        + ++    
Sbjct: 595 QISAGAYHTLTLKPDGTVWAYGANWNSQLGDGSTTD---SSTPVQVSGLTDAIAIAGGVY 651

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
           H   +   G V+T G N+S   G   T   I R   V+ +       +  G   T  L  
Sbjct: 652 HTIALKSDGTVWTWGWNNSGQLGDGTT---INRSTPVQVIGLTDVIAIAGGDYHTIALKS 708

Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
            G V T G N +GQLG G T +R TP  +  L ++   + IA G  + +A+  +G V+++
Sbjct: 709 DGTVWTWGFNYYGQLGGGATTNRSTPVQVKGLADI---IAIAGGYVHSIALKSDGTVWAW 765

Query: 294 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 353
           G      LG G   D L P  +         ++ ++ G  H +AL S G V+ WG    G
Sbjct: 766 GYNGYGQLGDGSTTDHLTPVQVSGLT----DIIAIAGGYIHTIALKSDGTVWAWGHNEGG 821

Query: 354 ALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRG 413
            LG G   + + P  +S L   +AV   AR   T  L   G+V+ +G   +G LG  D  
Sbjct: 822 QLGDGTTTNSSTPVQVSGLTDVIAV--TARLYHTIALKSDGTVWTWGRNIYGQLG--DGS 877

Query: 414 VSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEP 473
            +++ L  +++       V  I+ G YHT+ +   G ++ +G N   QLG+ + +    P
Sbjct: 878 TTERSLPVQVIG---LTDVIAIAGGYYHTIALKSDGAVWAWGYNGNNQLGNWSTKNSSTP 934

Query: 474 TEIFIQEMEEDT 485
                 +M   T
Sbjct: 935 VRSLRYDMNSVT 946



 Score =  119 bits (298), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 101/369 (27%), Positives = 159/369 (43%), Gaps = 23/369 (6%)

Query: 115  QITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
            QI+ G YHTL L  + +V++CG++  G LG G    +    T +       V+ ++  + 
Sbjct: 1043 QISAGAYHTLTLKPDGTVWACGANWNGQLGDGTTINRS---TPVQVSGLTDVIAIAGGDY 1099

Query: 174  HAAFVLQSGQVFTCGDNSSFCCGHRD-TNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            H   +     V+  G NS    G    TNR I  P  V  L  +    +  G   T  L 
Sbjct: 1100 HTIALKSDNTVWAWGSNSYGQLGDGTITNRSI--PTPVTYLTNIIA--IAGGYVHTIALK 1155

Query: 233  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
              G V   G N +GQLG G T +R TP  ++ L +V   + IA    + +A+  +G V++
Sbjct: 1156 SDGTVWAWGYNGYGQLGDGSTTNRSTPVQVSGLTDV---IAIAGEYVHTVALKSDGTVWA 1212

Query: 293  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 352
            +G      LG G   +   P  +         V+ ++ G  H +AL S G V+TWG    
Sbjct: 1213 WGYNGYGQLGDGSTTNRSTPVQVSGLT----DVIAIAGGYVHTIALKSDGTVWTWGWNNS 1268

Query: 353  GALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDR 412
            G LG G  I++  P  +S L    A+ +      T  L    +V+ +G   +G LG    
Sbjct: 1269 GQLGDGTTINRLTPVQVSGLTD--AIAIAGGDYHTIALKSDNTVWAWGSNSYGQLG---D 1323

Query: 413  GVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLE 472
            G +   L P  +  L       I+ G YHT+ +     ++ +G N   QLG  +    L 
Sbjct: 1324 GTTINRLTPVQVSGLT--DAIAIAGGDYHTIALKSDNTVWAWGSNSYGQLGDVSTANSLT 1381

Query: 473  PTEIFIQEM 481
            P +  +  +
Sbjct: 1382 PAQCLLSPI 1390



 Score =  112 bits (281), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 93/373 (24%), Positives = 160/373 (42%), Gaps = 27/373 (7%)

Query: 115 QITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
           QI+ G YHTL L  + +V++ G++  G LG    T +    T +       V+ ++    
Sbjct: 147 QISAGAYHTLTLKPDGAVWTWGANWNGQLGDESTTNRS---TPVQVSGLTDVIAIAGGAY 203

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGH---RDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
           H   +   G V+  G+N     G     D + P+    L + +       +  G   T  
Sbjct: 204 HTIALKSDGTVWAWGNNEGGQLGDGSTTDRSTPVQVSGLTDVIA------IAGGYAHTIA 257

Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 290
           L   G V   G N  G+LG G T +R  P  +  L +V   + IA G ++ +A+  +G V
Sbjct: 258 LKSDGTVWAWGDNEGGRLGDGSTTNRSIPVKVGGLSDV---IAIAGGNAHTIALKSDGTV 314

Query: 291 YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKG 350
           +++G      LG G   +   P  +         V+ ++ G  H + L S G V+TWG  
Sbjct: 315 WAWGDNEGGQLGDGSTTNRSTPVKVSGLA----DVIAIAGGYSHTIVLRSDGTVWTWGHN 370

Query: 351 YCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFP 410
             G LG G   +++ P  +S L   +A+        T  +   G+++ +G+  +G LG  
Sbjct: 371 EGGQLGDGSTTNRSTPVQVSGLADVIAI--AGGVYHTIAVKSDGTMWAWGYNWYGQLG-- 426

Query: 411 DRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGC 470
             G +     P  ++ L    V  I+ G YHT+ +   G ++ +G N   QLG  ++   
Sbjct: 427 -DGTTINSSTPVQVNGLT--DVIAIAGGYYHTIAMKSDGAVWTWGFNYYGQLGDGSITNR 483

Query: 471 LEPTEIFIQEMEE 483
             P +  +  M+ 
Sbjct: 484 STPAQRSLSGMKS 496



 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 79/261 (30%), Positives = 127/261 (48%), Gaps = 14/261 (5%)

Query: 216  VPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA 275
            +P  Q++AG   T  L   G V  CG+N +GQLG G T++R TP  ++ L +   V+ IA
Sbjct: 1039 LPRSQISAGAYHTLTLKPDGTVWACGANWNGQLGDGTTINRSTPVQVSGLTD---VIAIA 1095

Query: 276  AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHV 335
             G  + +A+  +  V+++GS S   LG G     +  R+I T      +++ ++ G  H 
Sbjct: 1096 GGDYHTIALKSDNTVWAWGSNSYGQLGDG----TITNRSIPTPVTYLTNIIAIAGGYVHT 1151

Query: 336  VALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGS 395
            +AL S G V+ WG    G LG G   +++ P  +S L   +A  +      T  L   G+
Sbjct: 1152 IALKSDGTVWAWGYNGYGQLGDGSTTNRSTPVQVSGLTDVIA--IAGEYVHTVALKSDGT 1209

Query: 396  VYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFG 455
            V+ +G+ G+G LG    G +     P  +  L    V  I+ G  HT+ +   G ++ +G
Sbjct: 1210 VWAWGYNGYGQLG---DGSTTNRSTPVQVSGLT--DVIAIAGGYVHTIALKSDGTVWTWG 1264

Query: 456  DNERAQLGHDTLRGCLEPTEI 476
             N   QLG  T    L P ++
Sbjct: 1265 WNNSGQLGDGTTINRLTPVQV 1285



 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 76/261 (29%), Positives = 124/261 (47%), Gaps = 14/261 (5%)

Query: 216 VPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA 275
           +P  Q++AG   T  L   G V   G+N + QLG G T D  TP  ++ L +    + IA
Sbjct: 591 MPRTQISAGAYHTLTLKPDGTVWAYGANWNSQLGDGSTTDSSTPVQVSGLTDA---IAIA 647

Query: 276 AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHV 335
            G  + +A+  +G V+++G  ++  LG G   +   P  +         V+ ++ GD H 
Sbjct: 648 GGVYHTIALKSDGTVWTWGWNNSGQLGDGTTINRSTPVQVIGLT----DVIAIAGGDYHT 703

Query: 336 VALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGS 395
           +AL S G V+TWG  Y G LG G   +++ P  +  L   +A  +      +  L   G+
Sbjct: 704 IALKSDGTVWTWGFNYYGQLGGGATTNRSTPVQVKGLADIIA--IAGGYVHSIALKSDGT 761

Query: 396 VYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFG 455
           V+ +G+ G+G LG  D   +D  L P  +  L    +  I+ G  HT+ +   G ++ +G
Sbjct: 762 VWAWGYNGYGQLG--DGSTTDH-LTPVQVSGLT--DIIAIAGGYIHTIALKSDGTVWAWG 816

Query: 456 DNERAQLGHDTLRGCLEPTEI 476
            NE  QLG  T      P ++
Sbjct: 817 HNEGGQLGDGTTTNSSTPVQV 837



 Score =  101 bits (252), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 75/261 (28%), Positives = 120/261 (45%), Gaps = 14/261 (5%)

Query: 216 VPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA 275
           +P  Q++AG   T  L   G V T G+N +GQLG   T +R TP  ++ L +   V+ IA
Sbjct: 143 IPRSQISAGAYHTLTLKPDGAVWTWGANWNGQLGDESTTNRSTPVQVSGLTD---VIAIA 199

Query: 276 AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHV 335
            G  + +A+  +G V+++G+     LG G   D   P  +         V+ ++ G  H 
Sbjct: 200 GGAYHTIALKSDGTVWAWGNNEGGQLGDGSTTDRSTPVQVSGLT----DVIAIAGGYAHT 255

Query: 336 VALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGS 395
           +AL S G V+ WG    G LG G   ++++P  +  L   +A  +      T  L   G+
Sbjct: 256 IALKSDGTVWAWGDNEGGRLGDGSTTNRSIPVKVGGLSDVIA--IAGGNAHTIALKSDGT 313

Query: 396 VYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFG 455
           V+ +G    G LG    G +     P  +  L    V  I+ G  HT+V+   G ++ +G
Sbjct: 314 VWAWGDNEGGQLG---DGSTTNRSTPVKVSGLA--DVIAIAGGYSHTIVLRSDGTVWTWG 368

Query: 456 DNERAQLGHDTLRGCLEPTEI 476
            NE  QLG  +      P ++
Sbjct: 369 HNEGGQLGDGSTTNRSTPVQV 389



 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 88/328 (26%), Positives = 147/328 (44%), Gaps = 21/328 (6%)

Query: 114 MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           + I  G YHT+ L S+ +V++ G++  G LG G  T +    T +       V+ ++   
Sbjct: 196 IAIAGGAYHTIALKSDGTVWAWGNNEGGQLGDGSTTDRS---TPVQVSGLTDVIAIAGGY 252

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
            H   +   G V+  GDN     G    TNR I  P  V  L  V    +  G   T  L
Sbjct: 253 AHTIALKSDGTVWAWGDNEGGRLGDGSTTNRSI--PVKVGGLSDVIA--IAGGNAHTIAL 308

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
              G V   G N  GQLG G T +R TP  ++ L +V   + IA G S+ + +  +G V+
Sbjct: 309 KSDGTVWAWGDNEGGQLGDGSTTNRSTPVKVSGLADV---IAIAGGYSHTIVLRSDGTVW 365

Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 351
           ++G      LG G   +   P  +         V+ ++ G  H +A+ S G ++ WG  +
Sbjct: 366 TWGHNEGGQLGDGSTTNRSTPVQVSGLA----DVIAIAGGVYHTIAVKSDGTMWAWGYNW 421

Query: 352 CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 411
            G LG G  I+ + P  ++ L   +A  +      T  +   G+V+ +G+  +G LG  D
Sbjct: 422 YGQLGDGTTINSSTPVQVNGLTDVIA--IAGGYYHTIAMKSDGAVWTWGFNYYGQLG--D 477

Query: 412 RGVSDK-VLRPRILDSLRAHHVSQISTG 438
             ++++     R L  +++     ++TG
Sbjct: 478 GSITNRSTPAQRSLSGMKSVATPTVTTG 505



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 88/323 (27%), Positives = 140/323 (43%), Gaps = 19/323 (5%)

Query: 89  NWKRVLRFLQSVEHSSDI-VETSAGNMQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGP 146
           NW   L    + + S+ + V      + I  G YHT+ L S+ +V++ G +  G LG G 
Sbjct: 618 NWNSQLGDGSTTDSSTPVQVSGLTDAIAIAGGVYHTIALKSDGTVWTWGWNNSGQLGDGT 677

Query: 147 ETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNS-SFCCGHRDTNRPIF 205
              +      I       V+ ++  + H   +   G V+T G N      G   TNR   
Sbjct: 678 TINRSTPVQVIGL---TDVIAIAGGDYHTIALKSDGTVWTWGFNYYGQLGGGATTNRS-- 732

Query: 206 RPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL 265
            P  V+ L  +    +  G   +  L   G V   G N +GQLG G T D  TP  ++ L
Sbjct: 733 TPVQVKGLADIIA--IAGGYVHSIALKSDGTVWAWGYNGYGQLGDGSTTDHLTPVQVSGL 790

Query: 266 EEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHV 325
            ++   + IA G  + +A+  +G V+++G      LG G   +   P  +         V
Sbjct: 791 TDI---IAIAGGYIHTIALKSDGTVWAWGHNEGGQLGDGTTTNSSTPVQVSGLT----DV 843

Query: 326 VRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKR 385
           + V+A   H +AL S G V+TWG+   G LG G   +++LP  +  L   +A  +     
Sbjct: 844 IAVTARLYHTIALKSDGTVWTWGRNIYGQLGDGSTTERSLPVQVIGLTDVIA--IAGGYY 901

Query: 386 KTFVLVDTGSVYGFGWMGFGSLG 408
            T  L   G+V+ +G+ G   LG
Sbjct: 902 HTIALKSDGAVWAWGYNGNNQLG 924



 Score = 72.8 bits (177), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 100/407 (24%), Positives = 155/407 (38%), Gaps = 59/407 (14%)

Query: 114  MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
            + I  G YHT+ L S+ +V++ G +  G LG G  T +    T +     A ++ ++   
Sbjct: 694  IAIAGGDYHTIALKSDGTVWTWGFNYYGQLGGGATTNRS---TPVQVKGLADIIAIAGGY 750

Query: 173  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
             H+  +   G V+  G N     G   T   +  P  V  L  +    +  G   T  L 
Sbjct: 751  VHSIALKSDGTVWAWGYNGYGQLGDGSTTDHL-TPVQVSGLTDIIA--IAGGYIHTIALK 807

Query: 233  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
              G V   G N  GQLG G T +  TP  ++ L +V   + + A   + +A+  +G V++
Sbjct: 808  SDGTVWAWGHNEGGQLGDGTTTNSSTPVQVSGLTDV---IAVTARLYHTIALKSDGTVWT 864

Query: 293  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 352
            +G      LG G   +   P  +         V+ ++ G  H +AL S G V+ W  GY 
Sbjct: 865  WGRNIYGQLGDGSTTERSLPVQVIGLT----DVIAIAGGYYHTIALKSDGAVWAW--GYN 918

Query: 353  GALGHGDEIDKTLPEPLSSLKSHL-AVQVCARKRKTFVLVDTGSVYGFGWMG---FGSLG 408
            G    G+   K    P+ SL+  + +V   A    +   V   SV   GW+      +  
Sbjct: 919  GNNQLGNWSTKNSSTPVRSLRYDMNSVTTPAVITGSTTCVSLSSVLLNGWVDGNRAATTA 978

Query: 409  FPDRGVSDKV-----------------------LRPRILDSLR--AHHV----------- 432
            + D G S  V                       L P      R  A +            
Sbjct: 979  WFDYGTSSGVYFDTTATIPCGTSSAYISATLGSLTPWTTYYYRIAAQNSRGISYGSETIF 1038

Query: 433  ---SQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 476
               SQIS G YHT+ +   G ++  G N   QLG  T      P ++
Sbjct: 1039 LPRSQISAGAYHTLTLKPDGTVWACGANWNGQLGDGTTINRSTPVQV 1085


>gi|357620246|gb|EHJ72511.1| hypothetical protein KGM_11261 [Danaus plexippus]
          Length = 4305

 Score =  121 bits (304), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 91/303 (30%), Positives = 150/303 (49%), Gaps = 15/303 (4%)

Query: 168  VSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNR---PIFRPRLVEALKGVPCKQVTAG 224
            VS   N  +      +VF  G N     G    ++   P+F P L  AL+ V    +  G
Sbjct: 3043 VSVDNNPPSLPNDCPKVFVWGLNDKDQLGGVKGSKVKVPVFSPAL-SALRPV---HIAGG 3098

Query: 225  LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEV-GSVVQIAAGPSYMLA 283
                  ++  G +  CG  T+G+LG G + +  TP++   L  V    V + +G  + LA
Sbjct: 3099 SKTLFIVSHDGKLFACGEGTNGRLGLGHSNNVSTPRANPYLSHVLVRRVAVHSGGKHALA 3158

Query: 284  VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 343
            +T +G VYS+G G +  LGHG +     PR I++    G  V+ ++ G  H   + + G+
Sbjct: 3159 LTADGKVYSWGEGEDGKLGHGNRITLEAPRLIESL--AGERVISIACGSAHSACVTARGH 3216

Query: 344  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVC--ARKRKTFVLVDTGSVYGFGW 401
            +YTWG G  G LGHGD+  + +P+ + +L ++  +QV   +R  +T  L   G V+ +G 
Sbjct: 3217 LYTWGLGEYGRLGHGDDNIQLVPKMVEALANYRVIQVACGSRDAQTLALTACGKVFSWGD 3276

Query: 402  MGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQ 461
              FG LG   RG SD    P  ++ L +  V+Q+  G   ++ +T  G ++ +G  +  +
Sbjct: 3277 GDFGKLG---RGGSDGCAIPMNVERLNSLGVTQVECGAQFSLALTRDGEVWTWGKGDYFR 3333

Query: 462  LGH 464
            LGH
Sbjct: 3334 LGH 3336



 Score =  116 bits (290), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 87/310 (28%), Positives = 141/310 (45%), Gaps = 11/310 (3%)

Query: 161  SAAHVVQVSASENHAAFVLQSGQVFTCGD--NSSFCCGHRDTNRPIFRPRLVEALKGVPC 218
            SA   V ++        V   G++F CG+  N     GH +    +  PR    L  V  
Sbjct: 3088 SALRPVHIAGGSKTLFIVSHDGKLFACGEGTNGRLGLGHSNN---VSTPRANPYLSHVLV 3144

Query: 219  KQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA 276
            ++V   +G      LT  G V++ G    G+LGHG+ +    P+ I  L     V+ IA 
Sbjct: 3145 RRVAVHSGGKHALALTADGKVYSWGEGEDGKLGHGNRITLEAPRLIESLAG-ERVISIAC 3203

Query: 277  GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVV 336
            G ++   VT  G +Y++G G    LGHG+ + +L P+ ++      +  V   + D   +
Sbjct: 3204 GSAHSACVTARGHLYTWGLGEYGRLGHGDDNIQLVPKMVEALANYRVIQVACGSRDAQTL 3263

Query: 337  ALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSV 396
            AL + G V++WG G  G LG G      +P  +  L S    QV    + +  L   G V
Sbjct: 3264 ALTACGKVFSWGDGDFGKLGRGGSDGCAIPMNVERLNSLGVTQVECGAQFSLALTRDGEV 3323

Query: 397  YGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGD 456
            + +G   +  LG    G    V RP ++++LR   V  ++ G  H + VT   +++ +GD
Sbjct: 3324 WTWGKGDYFRLGH---GCDAHVRRPTLVEALRGRRVIHVAVGALHCLAVTSENQVWAWGD 3380

Query: 457  NERAQLGHDT 466
            N+  Q G+ T
Sbjct: 3381 NDHGQQGNGT 3390



 Score =  115 bits (288), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 96/346 (27%), Positives = 158/346 (45%), Gaps = 8/346 (2%)

Query: 130  SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGD 189
            +V+  G +  G LG G E  +  + T  +  +A + VQ+   E     V   G+V+  G 
Sbjct: 3952 AVYGWGHNHRGQLG-GVEGAKVRTPTPCHALAALNPVQLVGGEQTLFAVTPDGKVYATGY 4010

Query: 190  NSSFCCGHRDTNRPIFRPRLVEALKGVPCKQV--TAGLNFTGFLTIRGHVHTCGSNTHGQ 247
             +    G    +  + +P L+ +++ V   +V   +G      L+  G V++ G    G+
Sbjct: 4011 GAGGRLGIGGIDS-VSQPTLLASIQHVFITKVACNSGGKHCLALSADGEVYSWGEGEDGK 4069

Query: 248  LGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH 307
            LGHG+ +    PK I  L  +  VV IA G ++   +T  G +Y++G G    LGHG+  
Sbjct: 4070 LGHGNRVSYDRPKLITALSGL-EVVCIACGGAHSACLTARGRIYTWGKGRYGRLGHGDSE 4128

Query: 308  DELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPE 367
            D+L P+ ++      +  V   +GD   + +     V++WG G  G LG G      LP 
Sbjct: 4129 DQLIPKLVEALSSFRVIDVACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSEGCKLPM 4188

Query: 368  PLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSL 427
             +  LK    ++V    + +  L   GSVY +G   +  LG    G  + V RP  +  +
Sbjct: 4189 RIDCLKGLRVIKVECGSQFSVALCQCGSVYTWGKGDYHRLGH---GSYEHVRRPMRVTGM 4245

Query: 428  RAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEP 473
            +   +  I+TG  H V  TD G ++ +GDN+  QLG  T      P
Sbjct: 4246 QGKMIVSIATGSLHCVACTDTGEVYTWGDNDEGQLGDGTTLAAQRP 4291



 Score = 95.5 bits (236), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 69/244 (28%), Positives = 113/244 (46%), Gaps = 10/244 (4%)

Query: 237  VHTCGSNTHGQLG--HGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 294
            V   G N   QLG   G  +  P     +P       V IA G   +  V+ +G +++ G
Sbjct: 3059 VFVWGLNDKDQLGGVKGSKVKVPV---FSPALSALRPVHIAGGSKTLFIVSHDGKLFACG 3115

Query: 295  SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGA 354
             G+N  LG G  ++   PRA        +  V V +G +H +AL + G VY+WG+G  G 
Sbjct: 3116 EGTNGRLGLGHSNNVSTPRANPYLSHVLVRRVAVHSGGKHALALTADGKVYSWGEGEDGK 3175

Query: 355  LGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGV 414
            LGHG+ I    P  + SL     + +      +  +   G +Y +G   +G LG  D  +
Sbjct: 3176 LGHGNRITLEAPRLIESLAGERVISIACGSAHSACVTARGHLYTWGLGEYGRLGHGDDNI 3235

Query: 415  SDKVLRPRILDSLRAHHVSQISTGLY--HTVVVTDRGRLFGFGDNERAQLGHDTLRGCLE 472
                L P+++++L  + V Q++ G     T+ +T  G++F +GD +  +LG     GC  
Sbjct: 3236 Q---LVPKMVEALANYRVIQVACGSRDAQTLALTACGKVFSWGDGDFGKLGRGGSDGCAI 3292

Query: 473  PTEI 476
            P  +
Sbjct: 3293 PMNV 3296



 Score = 92.4 bits (228), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 74/245 (30%), Positives = 121/245 (49%), Gaps = 12/245 (4%)

Query: 237  VHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
            V+  G N  GQLG   G  +  PTP  ++A L  V    Q+  G   + AVT +G VY+ 
Sbjct: 3953 VYGWGHNHRGQLGGVEGAKVRTPTPCHALAALNPV----QLVGGEQTLFAVTPDGKVYAT 4008

Query: 294  GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 353
            G G+   LG G      QP  + + +   I  V  ++G +H +AL + G VY+WG+G  G
Sbjct: 4009 GYGAGGRLGIGGIDSVSQPTLLASIQHVFITKVACNSGGKHCLALSADGEVYSWGEGEDG 4068

Query: 354  ALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRG 413
             LGHG+ +    P+ +++L     V +      +  L   G +Y +G   +G LG  D  
Sbjct: 4069 KLGHGNRVSYDRPKLITALSGLEVVCIACGGAHSACLTARGRIYTWGKGRYGRLGHGD-- 4126

Query: 414  VSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCL 471
             S+  L P+++++L +  V  ++  +G   T+ +TD   ++ +GD +  +LG     GC 
Sbjct: 4127 -SEDQLIPKLVEALSSFRVIDVACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSEGCK 4185

Query: 472  EPTEI 476
             P  I
Sbjct: 4186 LPMRI 4190



 Score = 92.0 bits (227), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 75/243 (30%), Positives = 113/243 (46%), Gaps = 9/243 (3%)

Query: 119  GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSASENHAAF 177
            G++   L ++  V+S G    G LGHG   T  +   R I   +   V+ ++    H+A 
Sbjct: 3153 GKHALALTADGKVYSWGEGEDGKLGHGNRIT--LEAPRLIESLAGERVISIACGSAHSAC 3210

Query: 178  VLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN--FTGFLTIRG 235
            V   G ++T G       GH D N  +  P++VEAL      QV  G     T  LT  G
Sbjct: 3211 VTARGHLYTWGLGEYGRLGHGDDNIQLV-PKMVEALANYRVIQVACGSRDAQTLALTACG 3269

Query: 236  HVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 295
             V + G    G+LG G +     P ++  L  +G V Q+  G  + LA+T +G V+++G 
Sbjct: 3270 KVFSWGDGDFGKLGRGGSDGCAIPMNVERLNSLG-VTQVECGAQFSLALTRDGEVWTWGK 3328

Query: 296  GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGAL 355
            G  F LGHG      +P  ++  R  G  V+ V+ G  H +A+ S   V+ WG    G  
Sbjct: 3329 GDYFRLGHGCDAHVRRPTLVEALR--GRRVIHVAVGALHCLAVTSENQVWAWGDNDHGQQ 3386

Query: 356  GHG 358
            G+G
Sbjct: 3387 GNG 3389



 Score = 86.3 bits (212), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 76/263 (28%), Positives = 119/263 (45%), Gaps = 13/263 (4%)

Query: 119  GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTR---INFPSAAHVVQVSASENHA 175
            G++   L ++  V+S G    G LGHG      VS+ R   I   S   VV ++    H+
Sbjct: 4047 GKHCLALSADGEVYSWGEGEDGKLGHGNR----VSYDRPKLITALSGLEVVCIACGGAHS 4102

Query: 176  AFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRG 235
            A +   G+++T G       GH D+   +  P+LVEAL       V  G      L I  
Sbjct: 4103 ACLTARGRIYTWGKGRYGRLGHGDSEDQLI-PKLVEALSSFRVIDVACGSGDAQTLCITD 4161

Query: 236  --HVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
              +V + G   +G+LG G +     P  I  L+ +  V+++  G  + +A+   G VY++
Sbjct: 4162 DDNVWSWGDGDYGKLGRGGSEGCKLPMRIDCLKGL-RVIKVECGSQFSVALCQCGSVYTW 4220

Query: 294  GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 353
            G G    LGHG      +P  +     +G  +V ++ G  H VA   +G VYTWG    G
Sbjct: 4221 GKGDYHRLGHGSYEHVRRPMRVTGM--QGKMIVSIATGSLHCVACTDTGEVYTWGDNDEG 4278

Query: 354  ALGHGDEIDKTLPEPLSSLKSHL 376
             LG G  +    P  L +L+ ++
Sbjct: 4279 QLGDGTTLAAQRPRLLMALQVNI 4301



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 77/307 (25%), Positives = 129/307 (42%), Gaps = 38/307 (12%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           + Q++ +E  A  +   G V+T   ++               P LV  L+     QV+  
Sbjct: 485 IQQIACAEKLALLLTHDGAVYTLPYDT-------------MTPHLVPGLESKTITQVSCH 531

Query: 225 LNFTGFLTIR--GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG--SVVQIAAGPSY 280
                +L     G   + G    G+LGHGDT  R  P+   PL  +    VV++AAG + 
Sbjct: 532 SLGRHYLCRSSCGGAWSWGIGEDGRLGHGDTAARDAPQ---PLHHLAHHEVVRVAAGLAC 588

Query: 281 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHV---VRVSAGDEHVVA 337
              +T  G +Y++G G+   LGHG   + L P+ + +F    I     V +  G+   + 
Sbjct: 589 SAVITSRGALYTWGRGAQGRLGHGTIENCLTPQPV-SFNAHNIERIIDVALGWGEGSTLC 647

Query: 338 LDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVY 397
               G V  +G+G  G            P  LS+L      +V   +     L D G VY
Sbjct: 648 CTWEGAVQVFGEGEAGT-----------PRALSALAMFRVTRVYTGEHWHAALTDGGQVY 696

Query: 398 GFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDN 457
            +G      LG    G  +    P+++++L+   +  +S G  H + ++  G LF +G +
Sbjct: 697 TWGKGDGYRLGH---GNMESTKIPKLVEALQGIKIVDLSLGASHGIALSSEGVLFVWGTH 753

Query: 458 ERAQLGH 464
           ER Q+ +
Sbjct: 754 ERTQISN 760



 Score = 65.9 bits (159), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 55/193 (28%), Positives = 90/193 (46%), Gaps = 24/193 (12%)

Query: 288 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 347
           G  +S+G G +  LGHG+      P+ +         VVRV+AG      + S G +YTW
Sbjct: 544 GGAWSWGIGEDGRLGHGDTAARDAPQPLHHLAHH--EVVRVAAGLACSAVITSRGALYTW 601

Query: 348 GKGYCGALGHGDEIDKTLPEPLS----SLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 403
           G+G  G LGHG   +   P+P+S    +++  + V +   +  T      G+V  FG   
Sbjct: 602 GRGAQGRLGHGTIENCLTPQPVSFNAHNIERIIDVALGWGEGSTLCCTWEGAVQVFGEGE 661

Query: 404 FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 463
            G+              PR L +L    V+++ TG +    +TD G+++ +G  +  +LG
Sbjct: 662 AGT--------------PRALSALAMFRVTRVYTGEHWHAALTDGGQVYTWGKGDGYRLG 707

Query: 464 HDTLRGCLEPTEI 476
           H    G +E T+I
Sbjct: 708 H----GNMESTKI 716



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 40/156 (25%), Positives = 63/156 (40%), Gaps = 17/156 (10%)

Query: 323 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCA 382
           I + +++  ++  + L   G VYT               D   P  +  L+S    QV  
Sbjct: 483 IRIQQIACAEKLALLLTHDGAVYTL------------PYDTMTPHLVPGLESKTITQVSC 530

Query: 383 RK--RKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLY 440
               R        G  + +G    G LG  D    D    P+ L  L  H V +++ GL 
Sbjct: 531 HSLGRHYLCRSSCGGAWSWGIGEDGRLGHGDTAARDA---PQPLHHLAHHEVVRVAAGLA 587

Query: 441 HTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 476
            + V+T RG L+ +G   + +LGH T+  CL P  +
Sbjct: 588 CSAVITSRGALYTWGRGAQGRLGHGTIENCLTPQPV 623



 Score = 49.7 bits (117), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 44/144 (30%), Positives = 61/144 (42%), Gaps = 2/144 (1%)

Query: 125  LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQV 184
            L +   VFS G    G LG G  +  C     +   ++  V QV      +  + + G+V
Sbjct: 3265 LTACGKVFSWGDGDFGKLGRG-GSDGCAIPMNVERLNSLGVTQVECGAQFSLALTRDGEV 3323

Query: 185  FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNT 244
            +T G    F  GH   +  + RP LVEAL+G     V  G      +T    V   G N 
Sbjct: 3324 WTWGKGDYFRLGH-GCDAHVRRPTLVEALRGRRVIHVAVGALHCLAVTSENQVWAWGDND 3382

Query: 245  HGQLGHGDTLDRPTPKSIAPLEEV 268
            HGQ G+G T     P  +A +E V
Sbjct: 3383 HGQQGNGTTCVNRRPALVAGVEGV 3406


>gi|156396924|ref|XP_001637642.1| predicted protein [Nematostella vectensis]
 gi|156224756|gb|EDO45579.1| predicted protein [Nematostella vectensis]
          Length = 1152

 Score =  121 bits (303), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 105/340 (30%), Positives = 160/340 (47%), Gaps = 20/340 (5%)

Query: 115 QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPS---AAHVVQVSA 170
           QI  G+Y T +I  +  V +CG    G LG G  T Q     R+NF +      V     
Sbjct: 399 QIEAGQYCTFVIFPDGFVHACGKGSYGRLGLGDSTNQ-TQLKRLNFDNECLVKSVSSSKG 457

Query: 171 SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG---VPCKQVTAGLNF 227
           S+ H   +   G+V++ GD      GH ++      P+LVE   G   V C  + AG   
Sbjct: 458 SDGHTLALTLDGKVYSWGDGDYGKLGHGNSQTQKI-PKLVEGALGNKVVCC--IAAGYRH 514

Query: 228 TGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN 287
           +  +T  G ++T G   +G+LGHGD   R  P  +   ++V +V Q+A G ++ + V+ +
Sbjct: 515 SAAVTEDGELYTWGEGDYGRLGHGDNNSRNVPVQV---KDVANVGQVACGSAHTVCVSQD 571

Query: 288 G-VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYT 346
           G  V+SFGSG N  LGH + +   +P+ I+  +  G+ + +V  G +  +AL S+G VY 
Sbjct: 572 GQTVWSFGSGDNGKLGHSDTNRVYKPKVIEALQ--GMVIRKVCCGSQCSLALTSTGQVYV 629

Query: 347 WGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGS 406
           WG G     G  D    T P+ L +L+SH  V +         L    +VY +G    G 
Sbjct: 630 WGCGPSLGTGSVDATSAT-PKLLLALQSHSVVDISVGDSHCVALTQDNNVYAWGNNSMGQ 688

Query: 407 LGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT 446
            G      +  + +P+ +  L    V QIS G  HTV  T
Sbjct: 689 CG--QGHCTTPITKPKKVLGLDGVAVHQISAGTSHTVAWT 726



 Score =  102 bits (255), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 97/345 (28%), Positives = 150/345 (43%), Gaps = 22/345 (6%)

Query: 127 SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFT 186
           SN  V+  GS+    L  G      V     +F SA    Q+ A +     +   G V  
Sbjct: 362 SNEEVYVWGSNSSHQLAEGSMDKILVPKLATSFGSAQ---QIEAGQYCTFVIFPDGFVHA 418

Query: 187 CGDNSSFCCGHRDTNRPIFRPRLV---EALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 243
           CG  S    G  D+       RL    E L         +  + T  LT+ G V++ G  
Sbjct: 419 CGKGSYGRLGLGDSTNQTQLKRLNFDNECLVKSVSSSKGSDGH-TLALTLDGKVYSWGDG 477

Query: 244 THGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH 303
            +G+LGHG++  +  PK +        V  IAAG  +  AVT +G +Y++G G    LGH
Sbjct: 478 DYGKLGHGNSQTQKIPKLVEGALGNKVVCCIAAGYRHSAAVTEDGELYTWGEGDYGRLGH 537

Query: 304 GEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY-VYTWGKGYCGALGHGDEID 362
           G+ +    P  ++     G    +V+ G  H V +   G  V+++G G  G LGH D   
Sbjct: 538 GDNNSRNVPVQVKDVANVG----QVACGSAHTVCVSQDGQTVWSFGSGDNGKLGHSDTNR 593

Query: 363 KTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGW---MGFGSLGFPDRGVSDKVL 419
              P+ + +L+  +  +VC   + +  L  TG VY +G    +G GS       V     
Sbjct: 594 VYKPKVIEALQGMVIRKVCCGSQCSLALTSTGQVYVWGCGPSLGTGS-------VDATSA 646

Query: 420 RPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 464
            P++L +L++H V  IS G  H V +T    ++ +G+N   Q G 
Sbjct: 647 TPKLLLALQSHSVVDISVGDSHCVALTQDNNVYAWGNNSMGQCGQ 691


>gi|159039902|ref|YP_001539155.1| chromosome condensation regulator RCC1 [Salinispora arenicola
           CNS-205]
 gi|157918737|gb|ABW00165.1| regulator of chromosome condensation RCC1 [Salinispora arenicola
           CNS-205]
          Length = 546

 Score =  121 bits (303), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 109/363 (30%), Positives = 163/363 (44%), Gaps = 9/363 (2%)

Query: 127 SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFT 186
           ++ ++ + GS+  G LG+G  TT   +   ++ P+    V ++A + H+  +  +G V  
Sbjct: 52  ASDTILAWGSNFFGELGNG-TTTNSSTPVDVSLPADTAAVAIAAGDAHSVALTAAGTVLA 110

Query: 187 CGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHG 246
            GDNS    G   T      P  V    GV    V AG + +  LT  G V   G N+ G
Sbjct: 111 WGDNSHGQLGD-GTGADSLTPVGVSLPAGVTASAVAAGRDHSVALTSAGTVLAWGGNSFG 169

Query: 247 QLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ 306
           QLG G  +DR TP ++A L    +V  +AAG ++ +A+T  G V ++G      LG G  
Sbjct: 170 QLGDGTVVDRSTPVAVA-LPPSTTVTAVAAGATHSVALTSAGTVLAWGGNPFGQLGDGTV 228

Query: 307 HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP 366
            D   P A+         V  V+AG  H VAL S+G V  WG+ + G LG G  +D++ P
Sbjct: 229 VDRSTPVAVA--LPPSTTVTAVAAGGNHSVALTSAGTVLAWGRNFFGQLGDGTVVDRSTP 286

Query: 367 EPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDS 426
             +S      A  V A +  +  L   G V  +G   FG LG    G +     P  +  
Sbjct: 287 TVVSLPAGVTASAVAAGRIHSLALTTAGGVLAWGNNTFGQLG---DGTTTTSSTPVSVTL 343

Query: 427 LRAHHVSQIST-GLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQEMEEDT 485
             A  ++ IS     H+V +T  G    +G N R QLG  T      P ++ +      T
Sbjct: 344 PAATTITAISARDSQHSVAMTSAGAALSWGRNLRGQLGDGTTTTRSTPVDVHLPTGVTVT 403

Query: 486 GLA 488
            +A
Sbjct: 404 AIA 406



 Score = 53.1 bits (126), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 66/227 (29%), Positives = 97/227 (42%), Gaps = 11/227 (4%)

Query: 116 ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           +  G  H++ L S  +V + G +  G LG G    +      +  P +  V  V+A  NH
Sbjct: 196 VAAGATHSVALTSAGTVLAWGGNPFGQLGDGTVVDRSTPV-AVALPPSTTVTAVAAGGNH 254

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFR--PRLVEALKGVPCKQVTAGLNFTGFLT 232
           +  +  +G V   G N     G       + R  P +V    GV    V AG   +  LT
Sbjct: 255 SVALTSAGTVLAWGRN---FFGQLGDGTVVDRSTPTVVSLPAGVTASAVAAGRIHSLALT 311

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPS-YMLAVTGNGVVY 291
             G V   G+NT GQLG G T    TP S+  L    ++  I+A  S + +A+T  G   
Sbjct: 312 TAGGVLAWGNNTFGQLGDGTTTTSSTPVSVT-LPAATTITAISARDSQHSVAMTSAGAAL 370

Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
           S+G      LG G       P  +      G+ V  ++AGD+H +AL
Sbjct: 371 SWGRNLRGQLGDGTTTTRSTP--VDVHLPTGVTVTAIAAGDDHSLAL 415


>gi|426232148|ref|XP_004010096.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 [Ovis aries]
          Length = 992

 Score =  121 bits (303), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 80/234 (34%), Positives = 120/234 (51%), Gaps = 5/234 (2%)

Query: 235 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 294
           G V +CG N+ GQLG   T     P+ I  LE +  V  ++ G  + LAV   G V+++G
Sbjct: 14  GTVQSCGDNSRGQLGRKGTPRGEQPERIPALETL-HVALVSCGKEHSLAVCHKGRVFAWG 72

Query: 295 SGSNFCLGHGE-QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 353
           + S   LG GE +     P+ I+T     I +++V+ G  H +AL   G V++WGK   G
Sbjct: 73  AASEGQLGIGELKETTFIPKKIKTL--ADIKIIQVACGHYHSLALSEDGQVFSWGKNSHG 130

Query: 354 ALGHGDEI-DKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDR 412
            LG G E   +  P+ + SL+     QV A    +F L  +G+ +G+G    G L     
Sbjct: 131 QLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGTSFGWGSNNAGQLALSGN 190

Query: 413 GVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDT 466
               +  +P ++ +L+   V  IS G  HT V+T  G++F FGDN   QLGHD+
Sbjct: 191 NAPVQRYKPVLVGALKTLSVVFISCGYEHTAVLTQDGKVFTFGDNSYGQLGHDS 244



 Score =  102 bits (254), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 86/290 (29%), Positives = 146/290 (50%), Gaps = 14/290 (4%)

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
           E+H+  +L  G V +CGDNS    G + T R   +P  + AL+ +    V+ G   +  +
Sbjct: 4   EHHSLLLLSDGTVQSCGDNSRGQLGRKGTPRGE-QPERIPALETLHVALVSCGKEHSLAV 62

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRP-TPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 290
             +G V   G+ + GQLG G+  +    PK I  L ++  ++Q+A G  + LA++ +G V
Sbjct: 63  CHKGRVFAWGAASEGQLGIGELKETTFIPKKIKTLADI-KIIQVACGHYHSLALSEDGQV 121

Query: 291 YSFGSGSNFCLGHGEQH-DELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 349
           +S+G  S+  LG G++   +  P+ +++   +GI + +V+AG  H  AL  SG  + WG 
Sbjct: 122 FSWGKNSHGQLGLGKEFPSQASPQRVRSL--EGIPLAQVAAGGAHSFALSLSGTSFGWGS 179

Query: 350 GYCGAL---GHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGS 406
              G L   G+   + +  P  + +LK+   V +      T VL   G V+ FG   +G 
Sbjct: 180 NNAGQLALSGNNAPVQRYKPVLVGALKTLSVVFISCGYEHTAVLTQDGKVFTFGDNSYGQ 239

Query: 407 LGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV-VTDRGRLFGFG 455
           LG      + +   P++++ +    VSQI  G YHT+  V   G++  FG
Sbjct: 240 LG---HDSTAEKRGPQLVERIEGL-VSQIDCGSYHTLAYVYTTGQVVSFG 285



 Score = 94.7 bits (234), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 82/288 (28%), Positives = 132/288 (45%), Gaps = 9/288 (3%)

Query: 118 TGRYHTLLI-SNSSVFSCGSSLCGVLGHG--PETTQCVSFTRINFPSAAHVVQVSASENH 174
           +G +H+LL+ S+ +V SCG +  G LG    P   Q     RI      HV  VS  + H
Sbjct: 2   SGEHHSLLLLSDGTVQSCGDNSRGQLGRKGTPRGEQP---ERIPALETLHVALVSCGKEH 58

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 234
           +  V   G+VF  G  S    G  +     F P+ ++ L  +   QV  G   +  L+  
Sbjct: 59  SLAVCHKGRVFAWGAASEGQLGIGELKETTFIPKKIKTLADIKIIQVACGHYHSLALSED 118

Query: 235 GHVHTCGSNTHGQLGHGDTL-DRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
           G V + G N+HGQLG G     + +P+ +  LE +  + Q+AAG ++  A++ +G  + +
Sbjct: 119 GQVFSWGKNSHGQLGLGKEFPSQASPQRVRSLEGI-PLAQVAAGGAHSFALSLSGTSFGW 177

Query: 294 GSGSNFCLGHGEQHDELQP-RAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 352
           GS +   L     +  +Q  + +     K + VV +S G EH   L   G V+T+G    
Sbjct: 178 GSNNAGQLALSGNNAPVQRYKPVLVGALKTLSVVFISCGYEHTAVLTQDGKVFTFGDNSY 237

Query: 353 GALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 400
           G LGH    +K  P+ +  ++  ++   C        +  TG V  FG
Sbjct: 238 GQLGHDSTAEKRGPQLVERIEGLVSQIDCGSYHTLAYVYTTGQVVSFG 285



 Score = 56.6 bits (135), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 53/208 (25%), Positives = 82/208 (39%), Gaps = 49/208 (23%)

Query: 114 MQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +Q+  G YH+L +S +  VFS G +  G LG G E     S  R+       + QV+A  
Sbjct: 103 IQVACGHYHSLALSEDGQVFSWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGG 162

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPI--FRPRLVEALKGVPCKQVTAGLNFTGF 230
            H+  +  SG  F  G N++        N P+  ++P LV ALK +    ++ G   T  
Sbjct: 163 AHSFALSLSGTSFGWGSNNAGQLALSGNNAPVQRYKPVLVGALKTLSVVFISCGYEHTAV 222

Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDR---------------------------------- 256
           LT  G V T G N++GQLGH  T ++                                  
Sbjct: 223 LTQDGKVFTFGDNSYGQLGHDSTAEKRGPQLVERIEGLVSQIDCGSYHTLAYVYTTGQVV 282

Query: 257 ------------PTPKSIAPLEEVGSVV 272
                       P P+++A   +V  ++
Sbjct: 283 SFGRGPGCTRSSPHPEALAESSDVSCLI 310


>gi|357520079|ref|XP_003630328.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
 gi|355524350|gb|AET04804.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
          Length = 316

 Score =  121 bits (303), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 89/318 (27%), Positives = 150/318 (47%), Gaps = 26/318 (8%)

Query: 161 SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQ 220
           S  HV+ +SA  +H   +L          +  F          I  P L E+ +   C +
Sbjct: 10  SPPHVLLISAGASHTVALL----------SKQFESSEMLARFLISTPLLPESWR--LCSK 57

Query: 221 VTA-GLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPS 279
           V A  +NF G +     V + G    GQLGHGDT DR  P  ++  +    +V +  G  
Sbjct: 58  VNASAVNFPGNV-----VCSWGRGEDGQLGHGDTDDRLLPTKLSAFDGQ-DIVSVTCGAD 111

Query: 280 YMLAVTGNGV-VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
           Y +A + +G  VYS+G G    LGHG+  D   P  I+    +G+ + ++S GD H +A+
Sbjct: 112 YTVARSKSGKDVYSWGWGDFGRLGHGDPSDLFIPHPIRAL--QGLRIKQISCGDCHCLAV 169

Query: 339 DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYG 398
                V +WG+   G LG G   D  +P+ + + +      V A    +  + + G +YG
Sbjct: 170 TMENKVLSWGRNQNGELGLGTTKDSHVPQKILAFEGIRIKMVAAGAEHSVAITEDGDLYG 229

Query: 399 FGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNE 458
           +GW  +G+LG  D   +D+++  ++  ++    +  +S G  HT+ ++  G L+  G ++
Sbjct: 230 WGWGRYGNLGLGD--TNDRLIPEKV--NIDGDKIVMVSCGWRHTISISSSGGLYTHGWSK 285

Query: 459 RAQLGHDTLRGCLEPTEI 476
             QLGH     CL P ++
Sbjct: 286 YGQLGHGDFEDCLVPRKV 303



 Score =  103 bits (256), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 79/251 (31%), Positives = 125/251 (49%), Gaps = 7/251 (2%)

Query: 131 VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQ-VFTCGD 189
           V S G    G LGHG +T   +  T+++      +V V+   ++     +SG+ V++ G 
Sbjct: 70  VCSWGRGEDGQLGHG-DTDDRLLPTKLSAFDGQDIVSVTCGADYTVARSKSGKDVYSWGW 128

Query: 190 NSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLG 249
                 GH D +  +F P  + AL+G+  KQ++ G      +T+   V + G N +G+LG
Sbjct: 129 GDFGRLGHGDPSD-LFIPHPIRALQGLRIKQISCGDCHCLAVTMENKVLSWGRNQNGELG 187

Query: 250 HGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDE 309
            G T D   P+ I   E +  +  +AAG  + +A+T +G +Y +G G    LG G+ +D 
Sbjct: 188 LGTTKDSHVPQKILAFEGI-RIKMVAAGAEHSVAITEDGDLYGWGWGRYGNLGLGDTNDR 246

Query: 310 LQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPL 369
           L P  +      G  +V VS G  H +++ SSG +YT G    G LGHGD  D  +P  +
Sbjct: 247 LIPEKVNI---DGDKIVMVSCGWRHTISISSSGGLYTHGWSKYGQLGHGDFEDCLVPRKV 303

Query: 370 SSLKSHLAVQV 380
            +L   L  QV
Sbjct: 304 QALSDKLISQV 314



 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 57/192 (29%), Positives = 87/192 (45%), Gaps = 6/192 (3%)

Query: 289 VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY-VYTW 347
           VV S+G G +  LGHG+  D L P  +  F   G  +V V+ G ++ VA   SG  VY+W
Sbjct: 69  VVCSWGRGEDGQLGHGDTDDRLLPTKLSAF--DGQDIVSVTCGADYTVARSKSGKDVYSW 126

Query: 348 GKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSL 407
           G G  G LGHGD  D  +P P+ +L+     Q+         +     V  +G    G L
Sbjct: 127 GWGDFGRLGHGDPSDLFIPHPIRALQGLRIKQISCGDCHCLAVTMENKVLSWGRNQNGEL 186

Query: 408 GFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTL 467
           G    G +     P+ + +     +  ++ G  H+V +T+ G L+G+G      LG    
Sbjct: 187 GL---GTTKDSHVPQKILAFEGIRIKMVAAGAEHSVAITEDGDLYGWGWGRYGNLGLGDT 243

Query: 468 RGCLEPTEIFIQ 479
              L P ++ I 
Sbjct: 244 NDRLIPEKVNID 255



 Score = 69.3 bits (168), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 45/138 (32%), Positives = 64/138 (46%), Gaps = 4/138 (2%)

Query: 344 VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGS-VYGFGWM 402
           V +WG+G  G LGHGD  D+ LP  LS+      V V      T     +G  VY +GW 
Sbjct: 70  VCSWGRGEDGQLGHGDTDDRLLPTKLSAFDGQDIVSVTCGADYTVARSKSGKDVYSWGWG 129

Query: 403 GFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQL 462
            FG LG  D      +  P  + +L+   + QIS G  H + VT   ++  +G N+  +L
Sbjct: 130 DFGRLGHGD---PSDLFIPHPIRALQGLRIKQISCGDCHCLAVTMENKVLSWGRNQNGEL 186

Query: 463 GHDTLRGCLEPTEIFIQE 480
           G  T +    P +I   E
Sbjct: 187 GLGTTKDSHVPQKILAFE 204


>gi|270002031|gb|EEZ98478.1| hypothetical protein TcasGA2_TC000971 [Tribolium castaneum]
          Length = 4191

 Score =  121 bits (303), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 103/335 (30%), Positives = 152/335 (45%), Gaps = 12/335 (3%)

Query: 115 QITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSA-SE 172
           Q+  G+Y T  I  + SV +CG    G LG G  + Q +   RI        +  S  S+
Sbjct: 383 QVEAGQYCTFAIHWDGSVSACGKGSYGRLGLGESSNQSLP-KRILLDCVVKKLSSSKGSD 441

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            H   + ++G V++ GD      GH +        R+     G   K + AG   +  +T
Sbjct: 442 GHTLALAETGVVYSWGDGDYGKLGHGNCATHKQPERITGPFLGKTIKYIHAGYRHSAAVT 501

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG-VVY 291
             G ++T G   HG+LGHGD+  R  P  +A L EVGSV   A G S+ L V+ +G  V+
Sbjct: 502 DDGKLYTWGEGDHGRLGHGDSNARYVPTQVAGLAEVGSV---ACGSSHTLVVSKDGKTVW 558

Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 351
           SFGSG +  LG GE     +P+ ++    +G+ + +V AG    +AL ++G VYTWG G 
Sbjct: 559 SFGSGEHGKLGTGELGKVYRPQVVEAL--QGLTIQKVCAGTWFSMALTTAGEVYTWGSGA 616

Query: 352 CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 411
               G  D I   LP  +  L  +  V + A       L D   V+ +G    G  G   
Sbjct: 617 ILGKGSADAI-VNLPMYVEDLAQYRIVDISAGDNHCLALTDEHEVFAWGTNSMGQCG--Q 673

Query: 412 RGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT 446
                 + RP  +  L    + QIS G  H++  T
Sbjct: 674 GHTCSPITRPLKVIGLEGVSIRQISAGTSHSMAWT 708



 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 96/353 (27%), Positives = 157/353 (44%), Gaps = 22/353 (6%)

Query: 104 SDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAA 163
           S I++  +G  +I +  +     S  SV+    +L  +L              I+F    
Sbjct: 282 SAIMQLESGKYKIKSDLWKGQTSSEVSVYEAAINLMEILAG----------MAIDFGGVC 331

Query: 164 HVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTA 223
             V+ + SE+    V +   V+  G NSS      +  + I  P  V++      +QV A
Sbjct: 332 SAVE-TTSESEVG-VYEKSDVYVWGSNSSHQLAEGNQEK-ILMP--VKSKMFTQVQQVEA 386

Query: 224 GLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
           G   T  +   G V  CG  ++G+LG G++ ++  PK I     V  +        + LA
Sbjct: 387 GQYCTFAIHWDGSVSACGKGSYGRLGLGESSNQSLPKRILLDCVVKKLSSSKGSDGHTLA 446

Query: 284 VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQ-TFRRKGIHVVRVSAGDEHVVALDSSG 342
           +   GVVYS+G G    LGHG      QP  I   F  K I  +   AG  H  A+   G
Sbjct: 447 LAETGVVYSWGDGDYGKLGHGNCATHKQPERITGPFLGKTIKYIH--AGYRHSAAVTDDG 504

Query: 343 YVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWM 402
            +YTWG+G  G LGHGD   + +P  ++ L + +    C       V  D  +V+ FG  
Sbjct: 505 KLYTWGEGDHGRLGHGDSNARYVPTQVAGL-AEVGSVACGSSHTLVVSKDGKTVWSFGSG 563

Query: 403 GFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFG 455
             G LG  + G   KV RP+++++L+   + ++  G + ++ +T  G ++ +G
Sbjct: 564 EHGKLGTGELG---KVYRPQVVEALQGLTIQKVCAGTWFSMALTTAGEVYTWG 613



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 100/374 (26%), Positives = 161/374 (43%), Gaps = 24/374 (6%)

Query: 107  VETSAGNMQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHV 165
            VE+ +   +I  G+  T +I S+ +V +CG    G LG G  +    S + I+      +
Sbjct: 3353 VESFSIARKIICGQNCTFVIQSDGTVLACGEGSYGRLGQG-NSDDLHSLSVISSLQGFVI 3411

Query: 166  VQVSAS---ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 222
              ++ S   + H+  + +SG+VF+ GD      GH + +R   RPR +EAL+     QV 
Sbjct: 3412 TDLATSVGSDGHSLALAESGEVFSWGDGDFGKLGHGNPDRQ-RRPRQIEALQTEQVVQVA 3470

Query: 223  AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 282
             G   +  +T  G + T G+   G+LG G   ++  P+ +  LE    + Q+A G ++  
Sbjct: 3471 CGFKHSAVVTSDGKLFTFGNGDFGKLGLGSVANKKLPERVMALEGY-RIGQVACGLNHTA 3529

Query: 283  AVTGNGV-VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 341
             V+ +G+ V++FG G    LG G    +L P+ ++T    GI   +V  G    + L   
Sbjct: 3530 CVSTDGMTVWTFGEGDYGKLGLGYATMKLLPQKVETVCNLGIK--KVGCGTHLTLFLTKD 3587

Query: 342  GYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGW 401
            G V+  G           E     P+ ++SL  +    +         L   G V G+G 
Sbjct: 3588 GKVFVCGIDRMPWHSLFRERAVFKPQIMTSLSDYSIEDLAVGTEHVLFLTTCGKVLGWGM 3647

Query: 402  MGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT-----------DRGR 450
             G G LG P   +   V  P I+  L    + QISTG  H+   +            R  
Sbjct: 3648 TGEGQLGLPHVSL---VRHPEIITELSDKGIRQISTGRTHSAAWSAPPLPQRVPGVTRSL 3704

Query: 451  LFGFGDNERAQLGH 464
             FG   N  +Q  H
Sbjct: 3705 TFGLPANIPSQYDH 3718



 Score = 88.2 bits (217), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 71/236 (30%), Positives = 111/236 (47%), Gaps = 13/236 (5%)

Query: 238  HTCGSNTHGQLGH-GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 296
            +  GS+ HGQL   G +   P       +E      +I  G +    +  +G V + G G
Sbjct: 3330 YMWGSDRHGQLAELGYSASVP-----VQVESFSIARKIICGQNCTFVIQSDGTVLACGEG 3384

Query: 297  SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG-DEHVVALDSSGYVYTWGKGYCGAL 355
            S   LG G   D      I + +   I  +  S G D H +AL  SG V++WG G  G L
Sbjct: 3385 SYGRLGQGNSDDLHSLSVISSLQGFVITDLATSVGSDGHSLALAESGEVFSWGDGDFGKL 3444

Query: 356  GHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVS 415
            GHG+   +  P  + +L++   VQV    + + V+   G ++ FG   FG LG     V+
Sbjct: 3445 GHGNPDRQRRPRQIEALQTEQVVQVACGFKHSAVVTSDGKLFTFGNGDFGKLGL--GSVA 3502

Query: 416  DKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGR---LFGFGDNERAQLGHDTLR 468
            +K L  R++ +L  + + Q++ GL HT  V+  G     FG GD  +  LG+ T++
Sbjct: 3503 NKKLPERVM-ALEGYRIGQVACGLNHTACVSTDGMTVWTFGEGDYGKLGLGYATMK 3557



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 55/190 (28%), Positives = 86/190 (45%), Gaps = 11/190 (5%)

Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 349
           VY +GS S+  L  G Q   L P   + F +    V +V AG     A+   G V   GK
Sbjct: 350 VYVWGSNSSHQLAEGNQEKILMPVKSKMFTQ----VQQVEAGQYCTFAIHWDGSVSACGK 405

Query: 350 GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRK---TFVLVDTGSVYGFGWMGFGS 406
           G  G LG G+  +++LP+ +  L   +  ++ + K     T  L +TG VY +G   +G 
Sbjct: 406 GSYGRLGLGESSNQSLPKRI--LLDCVVKKLSSSKGSDGHTLALAETGVVYSWGDGDYGK 463

Query: 407 LGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDT 466
           LG  +     +    RI        +  I  G  H+  VTD G+L+ +G+ +  +LGH  
Sbjct: 464 LGHGNCATHKQ--PERITGPFLGKTIKYIHAGYRHSAAVTDDGKLYTWGEGDHGRLGHGD 521

Query: 467 LRGCLEPTEI 476
                 PT++
Sbjct: 522 SNARYVPTQV 531


>gi|108761023|ref|YP_629150.1| RCC1 repeat-containing protein [Myxococcus xanthus DK 1622]
 gi|108464903|gb|ABF90088.1| RCC1 repeat domain protein [Myxococcus xanthus DK 1622]
          Length = 1466

 Score =  121 bits (303), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 108/366 (29%), Positives = 166/366 (45%), Gaps = 20/366 (5%)

Query: 115  QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
            +++ GR HTL++ ++ +V + G +  G LG G  T +      ++ P    V  V++   
Sbjct: 763  RLSVGRAHTLMVRADGTVMAWGENGSGQLGDGTSTHRT---GPVSVPGVPCVRSVASGIQ 819

Query: 174  HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
            H+  +   G V+  G N+    G   T  P   P LVE L+GV    + AG + +  L  
Sbjct: 820  HSLALACDGTVWAWGANARGQLGD-GTTTPRVTPGLVEGLRGVVA--LAAGGDASVALRA 876

Query: 234  RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
             G V + G N  GQLG G   DR  P   A +E + + V +A G ++ LAV  +G ++++
Sbjct: 877  DGSVWSWGGNASGQLGDGTLTDRALP---AHVEHLSNAVAVAVGETHALAVGEDGALWAW 933

Query: 294  GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 353
            G+  +  LG G     L P  ++   R    V  V+AG    VA+   G  + WG    G
Sbjct: 934  GANGSGQLGDGGTAPSLTPVRVKGLER----VASVAAGRAFSVAVRDDGTAWAWGTNPSG 989

Query: 354  ALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRG 413
             LG G    +++P  ++SLK   A+   A       L   G+V+ +G    G LG  D  
Sbjct: 990  QLGDGTNHARSVPNQVTSLKGIRAMSAGA--HHVVALSADGTVWTWGDNTLGQLG--DGS 1045

Query: 414  VSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEP 473
             S   + PR +  LR   V  ++ G   TV V   G    +G NE  QLG       L P
Sbjct: 1046 SSPTGMWPRQVPELRG--VEAVAAGEQFTVAVLLDGTARAWGSNEYGQLGDGKTGPQLTP 1103

Query: 474  TEIFIQ 479
              + I+
Sbjct: 1104 MAVKIE 1109



 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 108/360 (30%), Positives = 168/360 (46%), Gaps = 33/360 (9%)

Query: 111 AGNMQITTGRYHTLL-ISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS 169
           AG   + TG +H+L  + + SV++ G +  G LG G  T +  +  R+       V  V+
Sbjct: 409 AGVTSMATGSFHSLAALGDGSVWAWGRNTYGQLGDG-STAERHAAVRVE--GLGGVRSVA 465

Query: 170 ASENHAAFVLQSGQVFTCGDNSSFCCGHR---DTNRPIFRPRLVEALKGVPCKQVTAGLN 226
           ++ +H+  V   G V+  G N++   G     D  RP+  P L           V AG +
Sbjct: 466 SAAHHSLAVGMDGTVWAWGRNAAGQLGDGTTLDRARPVAVPGLTS------VTAVAAGGS 519

Query: 227 FTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTG 286
               L   G V   G N  GQLG G T+DR TP  ++ L   G+VV +AAG  + +A+  
Sbjct: 520 HVLALRSDGSVWAWGYNALGQLGDGTTVDRLTPVRVSGL---GAVVAVAAGSYFSMALQS 576

Query: 287 NGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYT 346
           +G V+++G G    LG G     L P  ++       ++ RV+AG  H +A+   G V+ 
Sbjct: 577 DGTVWTWGEGFEGQLGDGGGVQRLSPVRVEGL----ANITRVAAGSAHALAVRGDGTVWA 632

Query: 347 WGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGS 406
           WG    G LG G   D+  P  +  L+   A  V   +  +  L   G+V  +G+ G+G 
Sbjct: 633 WGDNGEGQLGDGSWADRFRPVQVPGLQGITA--VSGGRSHSMALQGDGTVRAWGYNGYGQ 690

Query: 407 LGFPDRGVSDKVLRPRI---LDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 463
           LG  D  ++ +V RP +   L  ++A H S +     H + +   G L G+G N   QLG
Sbjct: 691 LG--DGTLTSRV-RPALIPGLTGIQALHPSHL-----HVLALHADGTLRGWGYNRFGQLG 742



 Score =  115 bits (289), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 115/381 (30%), Positives = 168/381 (44%), Gaps = 28/381 (7%)

Query: 100  VEHSSDIVETSAGNMQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRIN 158
            VEH S+ V        +  G  H L +  + ++++ G++  G LG G       S T + 
Sbjct: 905  VEHLSNAVA-------VAVGETHALAVGEDGALWAWGANGSGQLGDG---GTAPSLTPVR 954

Query: 159  FPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPC 218
                  V  V+A    +  V   G  +  G N S   G   TN     P  V +LKG+  
Sbjct: 955  VKGLERVASVAAGRAFSVAVRDDGTAWAWGTNPSGQLGD-GTNHARSVPNQVTSLKGI-- 1011

Query: 219  KQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP--LEEVGSVVQIAA 276
            + ++AG +    L+  G V T G NT GQLG G +    +P  + P  + E+  V  +AA
Sbjct: 1012 RAMSAGAHHVVALSADGTVWTWGDNTLGQLGDGSS----SPTGMWPRQVPELRGVEAVAA 1067

Query: 277  GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVR-VSAGDEHV 335
            G  + +AV  +G   ++GS     LG G+   +L P A++    K    VR V A  +H 
Sbjct: 1068 GEQFTVAVLLDGTARAWGSNEYGQLGDGKTGPQLTPMAVKIEGPKIRPPVRTVRAWGQHA 1127

Query: 336  VALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGS 395
            V   S G V TWG    G LG G    + +P  +  L S +AV   A    +  L+  G+
Sbjct: 1128 VVQMSDGTVQTWGDNTFGQLGDGTTTRRAVPLTVYGLASVVAVSSGAWH--SLALLSDGT 1185

Query: 396  VYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFG 455
            V+ +G  GFG LG    G S    RP  +  L    V  I +G YH + V   G ++ +G
Sbjct: 1186 VWAWGANGFGQLG---DGTSTPRTRPVQVAGL--GDVVAIGSGGYHALAVCSDGSVWTWG 1240

Query: 456  DNERAQLGHDTLRGCLEPTEI 476
             N   QLG  T      PT +
Sbjct: 1241 YNAFGQLGDGTAESRSLPTRV 1261



 Score =  114 bits (286), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 104/353 (29%), Positives = 159/353 (45%), Gaps = 22/353 (6%)

Query: 125 LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQV 184
           L+   +VF+ G++  G LG G  T +    T    P    V  V     HA  + + G +
Sbjct: 324 LLDTGAVFAWGANGSGQLGDGDTTDRA---TPGPVPGLNAVASVVGGAQHALVLRKDGTL 380

Query: 185 FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNT 244
           +  G   S   GH  + R +  P  V  L GV     T   +    L   G V   G NT
Sbjct: 381 WAWGGGLSGQLGHGGSERHVV-PAPVMRLAGV-TSMATGSFHSLAALG-DGSVWAWGRNT 437

Query: 245 HGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHG 304
           +GQLG G T +R    +   +E +G V  +A+   + LAV  +G V+++G  +   LG G
Sbjct: 438 YGQLGDGSTAER---HAAVRVEGLGGVRSVASAAHHSLAVGMDGTVWAWGRNAAGQLGDG 494

Query: 305 EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKT 364
              D  +P A+         V  V+AG  HV+AL S G V+ WG    G LG G  +D+ 
Sbjct: 495 TTLDRARPVAVPGL----TSVTAVAAGGSHVLALRSDGSVWAWGYNALGQLGDGTTVDRL 550

Query: 365 LPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGF-GSLGFPDRGVSDKVLRPRI 423
            P  +S L +   V V A    +  L   G+V+ +G  GF G LG    G   + L P  
Sbjct: 551 TPVRVSGLGA--VVAVAAGSYFSMALQSDGTVWTWG-EGFEGQLG---DGGGVQRLSPVR 604

Query: 424 LDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 476
           ++ L   ++++++ G  H + V   G ++ +GDN   QLG  +      P ++
Sbjct: 605 VEGL--ANITRVAAGSAHALAVRGDGTVWAWGDNGEGQLGDGSWADRFRPVQV 655



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 116/360 (32%), Positives = 169/360 (46%), Gaps = 22/360 (6%)

Query: 107 VETSAGNMQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHV 165
           V  +A  M+I  G  H+L +S    V++ G +  G LG    + Q ++  R+   +  ++
Sbjct: 54  VVVTAPPMRIAAGTQHSLYLSPGGDVWAWGGNGSGQLGGAETSLQGLAPVRL--AALENI 111

Query: 166 VQVSASENHAAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V V + + H+  +   G V+T G NSS   G    T+R    P  V  L  V    V AG
Sbjct: 112 VSVVSGDAHSLALGADGSVWTWGGNSSGQLGDGTTTDRAT--PMRVAGLDSVVA--VAAG 167

Query: 225 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 284
              +  L   G V   G+N HGQLG G T    TP+ +  L     VV +AAG  + LAV
Sbjct: 168 DFHSLALREDGTVWAWGTNFHGQLGRGHTQPGLTPEQVPGLN---GVVALAAGFDFTLAV 224

Query: 285 TGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
             +G V ++GS  +  LG G     L P  ++     GI  VR  AG  H +AL   G V
Sbjct: 225 LEDGTVRAWGSNGSGQLGDGTSTQRLSP--VKVSELSGITEVR--AGTYHALALGKDGGV 280

Query: 345 YTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGF 404
           +TWG    G LG G   D+ +P  +  L+   A  V +    +  L+DTG+V+ +G  G 
Sbjct: 281 WTWGSNASGQLGDGTWNDRAVPMQVPGLERVKA--VASMDSDSLALLDTGAVFAWGANGS 338

Query: 405 GSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 464
           G LG  D   +D+   P  +  L A  V+ +  G  H +V+   G L+ +G     QLGH
Sbjct: 339 GQLGDGD--TTDRAT-PGPVPGLNA--VASVVGGAQHALVLRKDGTLWAWGGGLSGQLGH 393



 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 114/401 (28%), Positives = 169/401 (42%), Gaps = 31/401 (7%)

Query: 87   NGNWKRVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGP 146
             G W R +  L+ VE        +AG       ++   ++ + +  + GS+  G LG G 
Sbjct: 1049 TGMWPRQVPELRGVE------AVAAGE------QFTVAVLLDGTARAWGSNEYGQLGDGK 1096

Query: 147  ETTQCVSFT-RINFPSAAHVVQ-VSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPI 204
               Q      +I  P     V+ V A   HA   +  G V T GDN+    G   T R  
Sbjct: 1097 TGPQLTPMAVKIEGPKIRPPVRTVRAWGQHAVVQMSDGTVQTWGDNTFGQLGDGTTTRRA 1156

Query: 205  FRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP 264
              P  V  L  V    V++G   +  L   G V   G+N  GQLG G +  R  P  +A 
Sbjct: 1157 V-PLTVYGLASVVA--VSSGAWHSLALLSDGTVWAWGANGFGQLGDGTSTPRTRPVQVAG 1213

Query: 265  LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH 324
            L   G VV I +G  + LAV  +G V+++G  +   LG G       P  ++        
Sbjct: 1214 L---GDVVAIGSGGYHALAVCSDGSVWTWGYNAFGQLGDGTAESRSLPTRVEGLE----G 1266

Query: 325  VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARK 384
            VV V+ GD + +AL S G +  WG    G LG  D    T    ++       V V A  
Sbjct: 1267 VVAVAGGDHYSLALHSDGTLSAWGNNASGQLG--DGTGTTRYSRVAVKGVDGVVDVRAGA 1324

Query: 385  RKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV 444
              T  L   G+V+ +G   FG LG    G   +++ PR + +L +  VS +  G  HT  
Sbjct: 1325 THTVALRGDGTVWTWGDNAFGQLGDGASGTRMRLV-PRPVPNLSS--VSAVGAGARHTFA 1381

Query: 445  VTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQEMEEDT 485
            V  +G ++ +G N   QLG        EP  + ++E+ + T
Sbjct: 1382 VALKGTVWTWGRNSHGQLGLGDNTNRTEP--LRVRELSDVT 1420



 Score = 93.2 bits (230), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 104/347 (29%), Positives = 151/347 (43%), Gaps = 22/347 (6%)

Query: 119  GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
            G++  + +S+ +V + G +  G LG G  T + V  T       A VV VS+   H+  +
Sbjct: 1124 GQHAVVQMSDGTVQTWGDNTFGQLGDGTTTRRAVPLTVYGL---ASVVAVSSGAWHSLAL 1180

Query: 179  LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVH 238
            L  G V+  G N     G   T+ P  RP  V  L  V    + +G      +   G V 
Sbjct: 1181 LSDGTVWAWGANGFGQLGD-GTSTPRTRPVQVAGLGDVVA--IGSGGYHALAVCSDGSVW 1237

Query: 239  TCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
            T G N  GQLG G    R  P  +  LE    VV +A G  Y LA+  +G + ++G+ ++
Sbjct: 1238 TWGYNAFGQLGDGTAESRSLPTRVEGLE---GVVAVAGGDHYSLALHSDGTLSAWGNNAS 1294

Query: 299  FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 358
              LG G        R  +   +    VV V AG  H VAL   G V+TWG    G LG G
Sbjct: 1295 GQLGDGTG----TTRYSRVAVKGVDGVVDVRAGATHTVALRGDGTVWTWGDNAFGQLGDG 1350

Query: 359  DEIDKT--LPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSD 416
                +   +P P+ +L S  AV   AR   TF +   G+V+ +G    G LG  D     
Sbjct: 1351 ASGTRMRLVPRPVPNLSSVSAVGAGARH--TFAVALKGTVWTWGRNSHGQLGLGDNTNRT 1408

Query: 417  KVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 463
            + LR R L       V+ +S G   ++ +   G +  +G +    LG
Sbjct: 1409 EPLRVRELSD-----VTVVSGGADFSLAMKRDGTVLSWGSSLYGSLG 1450



 Score = 88.2 bits (217), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 95/353 (26%), Positives = 147/353 (41%), Gaps = 23/353 (6%)

Query: 116  ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
            ++ G +H + +S + +V++ G +  G LG G  +   +   ++  P    V  V+A E  
Sbjct: 1014 MSAGAHHVVALSADGTVWTWGDNTLGQLGDGSSSPTGMWPRQV--PELRGVEAVAAGEQF 1071

Query: 175  AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGV----PCKQVTAGLNFTGF 230
               VL  G     G N     G   T  P   P  V+ ++G     P + V A       
Sbjct: 1072 TVAVLLDGTARAWGSNEYGQLGDGKTG-PQLTPMAVK-IEGPKIRPPVRTVRAWGQHAVV 1129

Query: 231  LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 290
                G V T G NT GQLG G T  R  P ++  L    SVV +++G  + LA+  +G V
Sbjct: 1130 QMSDGTVQTWGDNTFGQLGDGTTTRRAVPLTVYGLA---SVVAVSSGAWHSLALLSDGTV 1186

Query: 291  YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKG 350
            +++G+     LG G      +P  +         VV + +G  H +A+ S G V+TWG  
Sbjct: 1187 WAWGANGFGQLGDGTSTPRTRPVQVAGLG----DVVAIGSGGYHALAVCSDGSVWTWGYN 1242

Query: 351  YCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFP 410
              G LG G    ++LP  +  L+    V V      +  L   G++  +G    G LG  
Sbjct: 1243 AFGQLGDGTAESRSLPTRVEGLEG--VVAVAGGDHYSLALHSDGTLSAWGNNASGQLGD- 1299

Query: 411  DRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 463
                     R   +       V  +  G  HTV +   G ++ +GDN   QLG
Sbjct: 1300 ----GTGTTRYSRVAVKGVDGVVDVRAGATHTVALRGDGTVWTWGDNAFGQLG 1348



 Score = 85.1 bits (209), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 99/358 (27%), Positives = 155/358 (43%), Gaps = 27/358 (7%)

Query: 114 MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           + +  G Y ++ L S+ +V++ G    G LG G    Q +S  R+     A++ +V+A  
Sbjct: 562 VAVAAGSYFSMALQSDGTVWTWGEGFEGQLGDG-GGVQRLSPVRVE--GLANITRVAAGS 618

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRD-TNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
            HA  V   G V+  GDN     G     +R  FRP  V  L+G+    V+ G + +  L
Sbjct: 619 AHALAVRGDGTVWAWGDNGEGQLGDGSWADR--FRPVQVPGLQGITA--VSGGRSHSMAL 674

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM--LAVTGNGV 289
              G V   G N +GQLG G    R  P  I  L  +      A  PS++  LA+  +G 
Sbjct: 675 QGDGTVRAWGYNGYGQLGDGTLTSRVRPALIPGLTGI-----QALHPSHLHVLALHADGT 729

Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 349
           +  +G      LG G       P  ++   R    V R+S G  H + + + G V  WG+
Sbjct: 730 LRGWGYNRFGQLGLGAAGWSAVPVQVRGIGR----VDRLSVGRAHTLMVRADGTVMAWGE 785

Query: 350 GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGF 409
              G LG G    +T   P+S         V +  + +  L   G+V+ +G    G LG 
Sbjct: 786 NGSGQLGDGTSTHRT--GPVSVPGVPCVRSVASGIQHSLALACDGTVWAWGANARGQLG- 842

Query: 410 PDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTL 467
              G +   + P +++ LR   V  ++ G   +V +   G ++ +G N   QLG  TL
Sbjct: 843 --DGTTTPRVTPGLVEGLRG--VVALAAGGDASVALRADGSVWSWGGNASGQLGDGTL 896



 Score = 83.2 bits (204), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 91/304 (29%), Positives = 140/304 (46%), Gaps = 25/304 (8%)

Query: 114  MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSAS 171
            + +++G +H+L L+S+ +V++ G++  G LG G  T +    TR +       VV + + 
Sbjct: 1168 VAVSSGAWHSLALLSDGTVWAWGANGFGQLGDGTSTPR----TRPVQVAGLGDVVAIGSG 1223

Query: 172  ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
              HA  V   G V+T G N+    G   T      P  VE L+GV    V  G +++  L
Sbjct: 1224 GYHALAVCSDGSVWTWGYNAFGQLGD-GTAESRSLPTRVEGLEGVVA--VAGGDHYSLAL 1280

Query: 232  TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
               G +   G+N  GQLG G    R    S   ++ V  VV + AG ++ +A+ G+G V+
Sbjct: 1281 HSDGTLSAWGNNASGQLGDGTGTTR---YSRVAVKGVDGVVDVRAGATHTVALRGDGTVW 1337

Query: 292  SFGSGSNFCLGHGEQHDELQ--PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 349
            ++G  +   LG G     ++  PR +         V  V AG  H  A+   G V+TWG+
Sbjct: 1338 TWGDNAFGQLGDGASGTRMRLVPRPVPNLS----SVSAVGAGARHTFAVALKGTVWTWGR 1393

Query: 350  GYCGALGHGDEIDKTLPEPLSSLKSHLAVQ-----VCARKRKTFVLVDTGSVYGFGWMGF 404
               G LG GD  ++T P  +  L     V        A KR   VL    S+YG   +G 
Sbjct: 1394 NSHGQLGLGDNTNRTEPLRVRELSDVTVVSGGADFSLAMKRDGTVLSWGSSLYGS--LGL 1451

Query: 405  GSLG 408
            G+ G
Sbjct: 1452 GATG 1455



 Score = 83.2 bits (204), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 83/279 (29%), Positives = 128/279 (45%), Gaps = 24/279 (8%)

Query: 216 VPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDT-LDRPTPKSIAPLEEVGSVVQI 274
            P  ++ AG   + +L+  G V   G N  GQLG  +T L    P  +A LE + SVV  
Sbjct: 58  APPMRIAAGTQHSLYLSPGGDVWAWGGNGSGQLGGAETSLQGLAPVRLAALENIVSVV-- 115

Query: 275 AAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH-VVRVSAGDE 333
            +G ++ LA+  +G V+++G  S+  LG G   D   P      R  G+  VV V+AGD 
Sbjct: 116 -SGDAHSLALGADGSVWTWGGNSSGQLGDGTTTDRATP-----MRVAGLDSVVAVAAGDF 169

Query: 334 HVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDT 393
           H +AL   G V+ WG  + G LG G       PE +  L     V + A    T  +++ 
Sbjct: 170 HSLALREDGTVWAWGTNFHGQLGRGHTQPGLTPEQVPGLNG--VVALAAGFDFTLAVLED 227

Query: 394 GSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFG 453
           G+V  +G  G G LG    G S + L P  +  L    ++++  G YH + +   G ++ 
Sbjct: 228 GTVRAWGSNGSGQLG---DGTSTQRLSPVKVSELSG--ITEVRAGTYHALALGKDGGVWT 282

Query: 454 FGDNERAQLGHDTLRGCLEPTEI-------FIQEMEEDT 485
           +G N   QLG  T      P ++        +  M+ D+
Sbjct: 283 WGSNASGQLGDGTWNDRAVPMQVPGLERVKAVASMDSDS 321



 Score = 69.7 bits (169), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 64/208 (30%), Positives = 97/208 (46%), Gaps = 10/208 (4%)

Query: 107  VETSAGNMQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHV 165
            VE   G + +  G +++L + S+ ++ + G++  G LG G  TT+   ++R+       V
Sbjct: 1261 VEGLEGVVAVAGGDHYSLALHSDGTLSAWGNNASGQLGDGTGTTR---YSRVAVKGVDGV 1317

Query: 166  VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTN-RPIFRPRLVEALKGVPCKQVTAG 224
            V V A   H   +   G V+T GDN+    G   +  R    PR V  L  V    V AG
Sbjct: 1318 VDVRAGATHTVALRGDGTVWTWGDNAFGQLGDGASGTRMRLVPRPVPNLSSVSA--VGAG 1375

Query: 225  LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 284
               T  + ++G V T G N+HGQLG GD  +R  P  +    E+  V  ++ G  + LA+
Sbjct: 1376 ARHTFAVALKGTVWTWGRNSHGQLGLGDNTNRTEPLRV---RELSDVTVVSGGADFSLAM 1432

Query: 285  TGNGVVYSFGSGSNFCLGHGEQHDELQP 312
              +G V S+GS     LG G       P
Sbjct: 1433 KRDGTVLSWGSSLYGSLGLGATGHRSSP 1460


>gi|195345959|ref|XP_002039536.1| GM23027 [Drosophila sechellia]
 gi|194134762|gb|EDW56278.1| GM23027 [Drosophila sechellia]
          Length = 3806

 Score =  121 bits (303), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 101/338 (29%), Positives = 157/338 (46%), Gaps = 17/338 (5%)

Query: 114  MQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTR---INFPSAAHVVQVS 169
            + I  G     ++S +  V++CG    G LG G   T  V       +        V V 
Sbjct: 2677 IHIAGGSKSLFIVSQDGKVYACGEGTNGRLGLG--VTHNVPLPHQLPVLHQYVVKKVAVH 2734

Query: 170  ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIF-RPRLVEALKGVPCKQVTAGLNFT 228
            +   HA  +   G+VF+ G+      GH   NR    +PRLVEAL+    + V  G + +
Sbjct: 2735 SGGKHALALTLDGKVFSWGEGEDGKLGH--GNRTTLDKPRLVEALRAKKIRDVACGSSHS 2792

Query: 229  GFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGP--SYMLAVTG 286
              ++ +G ++T G   +G+LGHGD   +  PK +  L     VVQ+A G   +  LA+T 
Sbjct: 2793 AAISSQGELYTWGLGEYGRLGHGDNTTQLKPKLVTALAGR-RVVQVACGSRDAQTLALTE 2851

Query: 287  NGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYT 346
            +G V+S+G G    LG G       P  I+  R  GI VV++  G +  +AL  +G V+T
Sbjct: 2852 DGAVFSWGDGDFGKLGRGGSEGSDTPHEIE--RLSGIGVVQIECGAQFSLALTRAGEVWT 2909

Query: 347  WGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGS 406
            WGKG    LGHG +     P+P+  L+    + V         + D G VY +G    G 
Sbjct: 2910 WGKGDYYRLGHGGDQHVRKPQPIGGLRGRRVIHVAVGALHCLAVTDAGQVYAWGDNDHGQ 2969

Query: 407  LGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV 444
             G  +  V+ K   P ++  L A  V++++ G  H++ 
Sbjct: 2970 QGSGNTFVNKK---PALVIGLDAVFVNRVACGSSHSIA 3004



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 87/294 (29%), Positives = 138/294 (46%), Gaps = 17/294 (5%)

Query: 177  FVLQSGQVFTCGDNSSFCCGHRDT-NRPIFRPRLVEALKGVPCKQVT--AGLNFTGFLTI 233
             V Q G+V+ CG+ ++   G   T N P+  P  +  L     K+V   +G      LT+
Sbjct: 2688 IVSQDGKVYACGEGTNGRLGLGVTHNVPL--PHQLPVLHQYVVKKVAVHSGGKHALALTL 2745

Query: 234  RGHVHTCGSNTHGQLGHGD--TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
             G V + G    G+LGHG+  TLD+P    +        +  +A G S+  A++  G +Y
Sbjct: 2746 DGKVFSWGEGEDGKLGHGNRTTLDKP---RLVEALRAKKIRDVACGSSHSAAISSQGELY 2802

Query: 292  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEHVVALDSSGYVYTWGK 349
            ++G G    LGHG+   +L+P+ +      G  VV+V+ G  D   +AL   G V++WG 
Sbjct: 2803 TWGLGEYGRLGHGDNTTQLKPKLVTAL--AGRRVVQVACGSRDAQTLALTEDGAVFSWGD 2860

Query: 350  GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGF 409
            G  G LG G       P  +  L     VQ+    + +  L   G V+ +G   +  LG 
Sbjct: 2861 GDFGKLGRGGSEGSDTPHEIERLSGIGVVQIECGAQFSLALTRAGEVWTWGKGDYYRLG- 2919

Query: 410  PDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 463
               G    V +P+ +  LR   V  ++ G  H + VTD G+++ +GDN+  Q G
Sbjct: 2920 --HGGDQHVRKPQPIGGLRGRRVIHVAVGALHCLAVTDAGQVYAWGDNDHGQQG 2971



 Score = 97.4 bits (241), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 82/269 (30%), Positives = 132/269 (49%), Gaps = 15/269 (5%)

Query: 184 VFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 243
            ++ G       GH DT+     P  + AL+    + V  G +++  +T  G++ T G  
Sbjct: 291 AYSWGTGEDHRLGHGDTHARAV-PTKIAALEQHCVQSVYCGCSYSAAITCGGNLLTWGRG 349

Query: 244 THGQLGHGDTLDRPTPKSIAPLEEVGSV-VQIAAGPSYMLAVTGNGVVYSFGSGSNFCLG 302
           T+ +LGHG++ DR  P  +  L +   V V + +G ++ LA+T  G+V+++G G    LG
Sbjct: 350 TYARLGHGNSDDRSLPTLVVALSDHMVVDVALGSGDAHSLALTSEGLVFAWGDGDYGKLG 409

Query: 303 HGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEID 362
           +G  +  LQP  +++  R    V RV AG +  VAL S G +YTWGK  C  LGH   ++
Sbjct: 410 NGNCNGSLQPILVESLPR----VQRVFAGSQFSVALSSEGQLYTWGKATC--LGH-QLVE 462

Query: 363 K-----TLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDK 417
           +     ++P  +SSL+    V V         L  +G V+G+G      +  P    S+ 
Sbjct: 463 RSVQGCSVPRLVSSLQHKRIVDVAVSVAHCLALSSSGEVFGWGRNDSQQI-CPASVSSEP 521

Query: 418 VLRPRILDSLRAHHVSQISTGLYHTVVVT 446
           +LR  IL SL     S I+     ++V T
Sbjct: 522 LLRTPILVSLPTFPASGIACTSAQSLVWT 550



 Score = 92.4 bits (228), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 70/245 (28%), Positives = 114/245 (46%), Gaps = 12/245 (4%)

Query: 237  VHTCGSNTHGQLG--HGDTLDRPT-PKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
            V   G N   QLG   G  +  PT  ++I+ L  +     IA G   +  V+ +G VY+ 
Sbjct: 2643 VMVWGLNDKEQLGGLKGSKVKVPTFSQTISRLRPI----HIAGGSKSLFIVSQDGKVYAC 2698

Query: 294  GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 353
            G G+N  LG G  H+   P  +    +  +  V V +G +H +AL   G V++WG+G  G
Sbjct: 2699 GEGTNGRLGLGVTHNVPLPHQLPVLHQYVVKKVAVHSGGKHALALTLDGKVFSWGEGEDG 2758

Query: 354  ALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRG 413
             LGHG+      P  + +L++     V      +  +   G +Y +G   +G LG  D  
Sbjct: 2759 KLGHGNRTTLDKPRLVEALRAKKIRDVACGSSHSAAISSQGELYTWGLGEYGRLGHGDNT 2818

Query: 414  VSDKVLRPRILDSLRAHHVSQISTGLY--HTVVVTDRGRLFGFGDNERAQLGHDTLRGCL 471
                 L+P+++ +L    V Q++ G     T+ +T+ G +F +GD +  +LG     G  
Sbjct: 2819 TQ---LKPKLVTALAGRRVVQVACGSRDAQTLALTEDGAVFSWGDGDFGKLGRGGSEGSD 2875

Query: 472  EPTEI 476
             P EI
Sbjct: 2876 TPHEI 2880



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 69/238 (28%), Positives = 113/238 (47%), Gaps = 12/238 (5%)

Query: 230 FLTIRGH--VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN 287
           FL I  +   ++ G+    +LGHGDT  R  P  IA LE+   V  +  G SY  A+T  
Sbjct: 282 FLAIDSNHNAYSWGTGEDHRLGHGDTHARAVPTKIAALEQ-HCVQSVYCGCSYSAAITCG 340

Query: 288 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 347
           G + ++G G+   LGHG   D   P  +       +  V + +GD H +AL S G V+ W
Sbjct: 341 GNLLTWGRGTYARLGHGNSDDRSLPTLVVALSDHMVVDVALGSGDAHSLALTSEGLVFAW 400

Query: 348 GKGYCGALGHGD---EIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGF 404
           G G  G LG+G+    +   L E L  ++     +V A  + +  L   G +Y +G    
Sbjct: 401 GDGDYGKLGNGNCNGSLQPILVESLPRVQ-----RVFAGSQFSVALSSEGQLYTWGKATC 455

Query: 405 GSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQL 462
                 +R V    + PR++ SL+   +  ++  + H + ++  G +FG+G N+  Q+
Sbjct: 456 LGHQLVERSVQGCSV-PRLVSSLQHKRIVDVAVSVAHCLALSSSGEVFGWGRNDSQQI 512



 Score = 62.4 bits (150), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 40/142 (28%), Positives = 71/142 (50%), Gaps = 5/142 (3%)

Query: 334 HVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDT 393
           H +A+DS+   Y+WG G    LGHGD   + +P  +++L+ H    V      +  +   
Sbjct: 281 HFLAIDSNHNAYSWGTGEDHRLGHGDTHARAVPTKIAALEQHCVQSVYCGCSYSAAITCG 340

Query: 394 GSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRL 451
           G++  +G   +  LG    G SD    P ++ +L  H V  ++  +G  H++ +T  G +
Sbjct: 341 GNLLTWGRGTYARLG---HGNSDDRSLPTLVVALSDHMVVDVALGSGDAHSLALTSEGLV 397

Query: 452 FGFGDNERAQLGHDTLRGCLEP 473
           F +GD +  +LG+    G L+P
Sbjct: 398 FAWGDGDYGKLGNGNCNGSLQP 419


>gi|428181106|gb|EKX49971.1| hypothetical protein GUITHDRAFT_161991 [Guillardia theta CCMP2712]
          Length = 658

 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 97/335 (28%), Positives = 163/335 (48%), Gaps = 28/335 (8%)

Query: 168 VSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF 227
           ++   +H   +  SG++ + G   S   GH   +     P +++ L     K+V  G+ F
Sbjct: 114 ITCGSDHVLALDASGKIRSWGRGESGQLGHASFSHS-STPSIIDELASQRVKEVACGVAF 172

Query: 228 TGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN 287
           +  L   G ++T G N +GQLG GD      P+ +  +     V  +A G ++++ +T +
Sbjct: 173 SAALMEGGQLYTWGCNRYGQLGQGDRTSSAIPRMLPSMNHR-HVHLMACGAAHIVVLTTS 231

Query: 288 GVVYSFGSGSNFCLGHGEQHDE-LQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYT 346
             VY++G+ S   LGHG +    LQP++++     G+ + ++ AG+ H   + S G +YT
Sbjct: 232 RDVYTWGNNSYGQLGHGFRKKHCLQPKSVRVM--SGLDIKQIVAGENHSCVMTSFGDIYT 289

Query: 347 WGKGYCGALGHGDEIDKTLPEPLSSL--KSHLAVQVCARKRKTFVLVDT--GSVYGFGWM 402
           WG+G  G LGHGD   K +P  LS L  K+  ++ V       F++  T  G+VY +G  
Sbjct: 290 WGRGDFGQLGHGDMESKDIPTLLSPLDPKTQASLIVSG---ADFIMAMTYSGAVYSWGRN 346

Query: 403 GFGSLGF--------PDRGVSDKVLRPRILDSLRAHH------VSQISTGLYHTVVVTD- 447
            FG LG          +R  SD V+ P+I+    A        +S IS G +H + +T+ 
Sbjct: 347 CFGQLGHGVDMHYSKSNRFPSD-VISPKIISFFAASEEHDAISLSSISCGSHHVLAITEK 405

Query: 448 RGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQEME 482
           +  LF +G  E  QLG D       P    +++M+
Sbjct: 406 KDTLFAWGRGEHGQLGLDPRDTSFRPIPQEVKKMK 440



 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 85/316 (26%), Positives = 141/316 (44%), Gaps = 30/316 (9%)

Query: 121 YHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSA--AHVVQVSASENHAAFV 178
           +   L+    +++ G +  G LG G  T+  +       PS    HV  ++    H   +
Sbjct: 172 FSAALMEGGQLYTWGCNRYGQLGQGDRTSSAIPRM---LPSMNHRHVHLMACGAAHIVVL 228

Query: 179 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVH 238
             S  V+T G+NS    GH    +   +P+ V  + G+  KQ+ AG N +  +T  G ++
Sbjct: 229 TTSRDVYTWGNNSYGQLGHGFRKKHCLQPKSVRVMSGLDIKQIVAGENHSCVMTSFGDIY 288

Query: 239 TCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
           T G    GQLGHGD   +  P  ++PL+       I +G  +++A+T +G VYS+G    
Sbjct: 289 TWGRGDFGQLGHGDMESKDIPTLLSPLDPKTQASLIVSGADFIMAMTYSGAVYSWGRNCF 348

Query: 299 FCLGHG-EQH---------DELQPRAIQTF----RRKGIHVVRVSAGDEHVVAL-DSSGY 343
             LGHG + H         D + P+ I  F        I +  +S G  HV+A+ +    
Sbjct: 349 GQLGHGVDMHYSKSNRFPSDVISPKIISFFAASEEHDAISLSSISCGSHHVLAITEKKDT 408

Query: 344 VYTWGKGYCGALG--HGDEIDKTLPEPLSSLKSHLAV-QVCARKRKTFVLVDTGS----- 395
           ++ WG+G  G LG    D   + +P+ +  +K  + +   C+      V    GS     
Sbjct: 409 LFAWGRGEHGQLGLDPRDTSFRPIPQEVKKMKGMIVLAAACSENHSVVVATMPGSGPKGD 468

Query: 396 --VYGFGWMGFGSLGF 409
             V+ +G   FG LG+
Sbjct: 469 MKVFSWGRGSFGQLGY 484



 Score = 85.1 bits (209), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 50/158 (31%), Positives = 82/158 (51%), Gaps = 4/158 (2%)

Query: 322 GIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVC 381
           G+ +  ++ G +HV+ALD+SG + +WG+G  G LGH      + P  +  L S    +V 
Sbjct: 108 GLSIKLITCGSDHVLALDASGKIRSWGRGESGQLGHASFSHSSTPSIIDELASQRVKEVA 167

Query: 382 ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYH 441
                +  L++ G +Y +G   +G LG  DR  S     PR+L S+   HV  ++ G  H
Sbjct: 168 CGVAFSAALMEGGQLYTWGCNRYGQLGQGDRTSS---AIPRMLPSMNHRHVHLMACGAAH 224

Query: 442 TVVVTDRGRLFGFGDNERAQLGHDTLRG-CLEPTEIFI 478
            VV+T    ++ +G+N   QLGH   +  CL+P  + +
Sbjct: 225 IVVLTTSRDVYTWGNNSYGQLGHGFRKKHCLQPKSVRV 262



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 72/262 (27%), Positives = 119/262 (45%), Gaps = 30/262 (11%)

Query: 124 LLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQ 183
           +L ++  V++ G++  G LGHG     C+    +   S   + Q+ A ENH+  +   G 
Sbjct: 227 VLTTSRDVYTWGNNSYGQLGHGFRKKHCLQPKSVRVMSGLDIKQIVAGENHSCVMTSFGD 286

Query: 184 VFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQ---VTAGLNFTGFLTIRGHVHTC 240
           ++T G       GH D       P L+  L   P  Q   + +G +F   +T  G V++ 
Sbjct: 287 IYTWGRGDFGQLGHGDMESKDI-PTLLSPLD--PKTQASLIVSGADFIMAMTYSGAVYSW 343

Query: 241 GSNTHGQLGHGDTL----------DRPTPKSI---APLEE--VGSVVQIAAGPSYMLAVT 285
           G N  GQLGHG  +          D  +PK I   A  EE    S+  I+ G  ++LA+T
Sbjct: 344 GRNCFGQLGHGVDMHYSKSNRFPSDVISPKIISFFAASEEHDAISLSSISCGSHHVLAIT 403

Query: 286 -GNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEH---VVALDSS 341
                ++++G G +  LG   +    +P   +  + KG+ V+  +  + H   V  +  S
Sbjct: 404 EKKDTLFAWGRGEHGQLGLDPRDTSFRPIPQEVKKMKGMIVLAAACSENHSVVVATMPGS 463

Query: 342 G-----YVYTWGKGYCGALGHG 358
           G      V++WG+G  G LG+G
Sbjct: 464 GPKGDMKVFSWGRGSFGQLGYG 485


>gi|47216552|emb|CAG04730.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 1036

 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 92/278 (33%), Positives = 137/278 (49%), Gaps = 14/278 (5%)

Query: 204 IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 263
           +  PR  E   G     V  GL  T FL   G V+TCG N  GQLGH  +  R  P+ + 
Sbjct: 22  VVEPRKCEFFHGKRVCDVGCGLKHTVFLLDDGTVYTCGCNDLGQLGHEKS--RKKPEHVV 79

Query: 264 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQ-PRAIQTFRRKG 322
            L+    +V ++ G S+ LA+   G V+S+G GSN  LG     + ++ PR I+      
Sbjct: 80  ALD-AQIIVAVSCGESHTLALNDKGQVFSWGLGSNGQLGLNNFEECVRVPRNIKCL--SD 136

Query: 323 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG---HGDEIDKTLPEPLSSLKSHLAVQ 379
           + + +V+ G  H  AL   G V++WG+   G LG   HG  I  + P+ + SL+     Q
Sbjct: 137 VQIAQVACGYWHSHALSKGGQVFSWGQNQFGQLGLGMHGSSI--STPQIIQSLQGIPFAQ 194

Query: 380 VCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGL 439
           + A    +F +  +G+V+G+G   FG LG  D    D+   P +L SLR+  V  +S G 
Sbjct: 195 LSAGGAHSFAITLSGAVFGWGKNKFGQLGLND--TKDRWF-PALLKSLRSQRVIFVSCGE 251

Query: 440 YHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF 477
            HT  +T    +F FG     QLGH+     + P ++F
Sbjct: 252 DHTAALTKLRGVFTFGAGGYGQLGHNCTNHEINPRKVF 289



 Score =  106 bits (265), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 95/307 (30%), Positives = 141/307 (45%), Gaps = 12/307 (3%)

Query: 135 GSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSF 193
           G++  G LG G    + V   R   F     V  V     H  F+L  G V+TCG N   
Sbjct: 5   GNASYGQLGLGGIDEEIVVEPRKCEFFHGKRVCDVGCGLKHTVFLLDDGTVYTCGCNDLG 64

Query: 194 CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDT 253
             GH  + +   +P  V AL       V+ G + T  L  +G V + G  ++GQLG  + 
Sbjct: 65  QLGHEKSRK---KPEHVVALDAQIIVAVSCGESHTLALNDKGQVFSWGLGSNGQLGLNNF 121

Query: 254 LD-RPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQ- 311
            +    P++I  L +V  + Q+A G  +  A++  G V+S+G      LG G     +  
Sbjct: 122 EECVRVPRNIKCLSDV-QIAQVACGYWHSHALSKGGQVFSWGQNQFGQLGLGMHGSSIST 180

Query: 312 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSS 371
           P+ IQ+   +GI   ++SAG  H  A+  SG V+ WGK   G LG  D  D+  P  L S
Sbjct: 181 PQIIQSL--QGIPFAQLSAGGAHSFAITLSGAVFGWGKNKFGQLGLNDTKDRWFPALLKS 238

Query: 372 LKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHH 431
           L+S   + V   +  T  L     V+ FG  G+G LG      ++  + PR +  L  + 
Sbjct: 239 LRSQRVIFVSCGEDHTAALTKLRGVFTFGAGGYGQLG---HNCTNHEINPRKVFELMGNV 295

Query: 432 VSQISTG 438
           V+QIS G
Sbjct: 296 VTQISCG 302



 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 79/272 (29%), Positives = 129/272 (47%), Gaps = 13/272 (4%)

Query: 119 GRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAF 177
           G  HT+ L+ + +V++CG +  G LGH     +      ++   A  +V VS  E+H   
Sbjct: 42  GLKHTVFLLDDGTVYTCGCNDLGQLGHEKSRKKPEHVVALD---AQIIVAVSCGESHTLA 98

Query: 178 VLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHV 237
           +   GQVF+ G  S+   G  +    +  PR ++ L  V   QV  G   +  L+  G V
Sbjct: 99  LNDKGQVFSWGLGSNGQLGLNNFEECVRVPRNIKCLSDVQIAQVACGYWHSHALSKGGQV 158

Query: 238 HTCGSNTHGQLG---HGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 294
            + G N  GQLG   HG ++   TP+ I  L+ +    Q++AG ++  A+T +G V+ +G
Sbjct: 159 FSWGQNQFGQLGLGMHGSSIS--TPQIIQSLQGI-PFAQLSAGGAHSFAITLSGAVFGWG 215

Query: 295 SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGA 354
                 LG  +  D   P  +++ R +   V+ VS G++H  AL     V+T+G G  G 
Sbjct: 216 KNKFGQLGLNDTKDRWFPALLKSLRSQ--RVIFVSCGEDHTAALTKLRGVFTFGAGGYGQ 273

Query: 355 LGHGDEIDKTLPEPLSSLKSHLAVQV-CARKR 385
           LGH     +  P  +  L  ++  Q+ C   R
Sbjct: 274 LGHNCTNHEINPRKVFELMGNVVTQISCGSTR 305


>gi|297800804|ref|XP_002868286.1| hypothetical protein ARALYDRAFT_493465 [Arabidopsis lyrata subsp.
            lyrata]
 gi|297314122|gb|EFH44545.1| hypothetical protein ARALYDRAFT_493465 [Arabidopsis lyrata subsp.
            lyrata]
          Length = 1867

 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 94/311 (30%), Positives = 142/311 (45%), Gaps = 18/311 (5%)

Query: 166  VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 225
            + ++    H A V + G+VFT G+ +    GH      + RP+LVE L       V  G 
Sbjct: 1084 IDIACGVRHIALVTRQGEVFTWGEEAGGRLGH-GIQVDVSRPKLVEFLALTNIDFVACGE 1142

Query: 226  NFTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
              T  ++  G + T G   H  G LGHG  L    PK ++   E   V+ +A G  +   
Sbjct: 1143 YHTCAVSTSGDLFTWGDGIHNVGLLGHGSDLSHWIPKRVSGPVEGLQVLSVACGTWHSAL 1202

Query: 284  VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL----- 338
             T NG +++FG G+   LGHG++     P+ ++     G+  ++V+ G  H VA+     
Sbjct: 1203 ATANGKLFTFGDGAFGVLGHGDRESVSYPKEVKML--SGLKTMKVACGVWHTVAIVEVMN 1260

Query: 339  -----DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDT 393
                  SS  ++TWG G    LGHG++    LP  +SSL  +   Q+      T  L  +
Sbjct: 1261 QTGTSMSSKKLFTWGDGDKNRLGHGNKETYLLPTCVSSLIDYNFQQIACGHTLTVALTTS 1320

Query: 394  GSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFG 453
            G V+  G    G LG  +   SD  L   + D L    V +IS G +H  V+T R  +F 
Sbjct: 1321 GHVFTMGGTSHGQLGSSN---SDGKLPCLVQDRLVGEFVEEISCGDHHVAVLTSRSEVFT 1377

Query: 454  FGDNERAQLGH 464
            +G     +LGH
Sbjct: 1378 WGKGSNGRLGH 1388



 Score =  105 bits (263), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 88/282 (31%), Positives = 135/282 (47%), Gaps = 20/282 (7%)

Query: 116  ITTGRYHTLLISNS-SVFSCGSSL--CGVLGHGPETTQCVSFTRINFP-SAAHVVQVSAS 171
            +  G YHT  +S S  +F+ G  +   G+LGHG + +  +   R++ P     V+ V+  
Sbjct: 1138 VACGEYHTCAVSTSGDLFTWGDGIHNVGLLGHGSDLSHWIP-KRVSGPVEGLQVLSVACG 1196

Query: 172  ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG------- 224
              H+A    +G++FT GD +    GH D    +  P+ V+ L G+   +V  G       
Sbjct: 1197 TWHSALATANGKLFTFGDGAFGVLGHGD-RESVSYPKEVKMLSGLKTMKVACGVWHTVAI 1255

Query: 225  ---LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 281
               +N TG       + T G     +LGHG+      P  ++ L +  +  QIA G +  
Sbjct: 1256 VEVMNQTGTSMSSKKLFTWGDGDKNRLGHGNKETYLLPTCVSSLIDY-NFQQIACGHTLT 1314

Query: 282  LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 341
            +A+T +G V++ G  S+  LG      +L P  +Q  R  G  V  +S GD HV  L S 
Sbjct: 1315 VALTTSGHVFTMGGTSHGQLGSSNSDGKL-PCLVQD-RLVGEFVEEISCGDHHVAVLTSR 1372

Query: 342  GYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKS-HLAVQVCA 382
              V+TWGKG  G LGHGD+ D+  P  + +LK  H+    CA
Sbjct: 1373 SEVFTWGKGSNGRLGHGDKEDRKTPTLVEALKERHVKSISCA 1414



 Score = 59.7 bits (143), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 51/207 (24%), Positives = 80/207 (38%), Gaps = 58/207 (28%)

Query: 272  VQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG 331
            + IA G  ++  VT  G V+++G  +   LGHG Q D  +P+ ++      I  V  + G
Sbjct: 1084 IDIACGVRHIALVTRQGEVFTWGEEAGGRLGHGIQVDVSRPKLVEFLALTNIDFV--ACG 1141

Query: 332  DEHVVALDSSGYVYTWGKGY--CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFV 389
            + H  A+ +SG ++TWG G    G LGHG ++   +P+ +S                   
Sbjct: 1142 EYHTCAVSTSGDLFTWGDGIHNVGLLGHGSDLSHWIPKRVS------------------- 1182

Query: 390  LVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRG 449
                G V G                                 V  ++ G +H+ + T  G
Sbjct: 1183 ----GPVEGL-------------------------------QVLSVACGTWHSALATANG 1207

Query: 450  RLFGFGDNERAQLGHDTLRGCLEPTEI 476
            +LF FGD     LGH        P E+
Sbjct: 1208 KLFTFGDGAFGVLGHGDRESVSYPKEV 1234


>gi|196012194|ref|XP_002115960.1| hypothetical protein TRIADDRAFT_59918 [Trichoplax adhaerens]
 gi|190581736|gb|EDV21812.1| hypothetical protein TRIADDRAFT_59918 [Trichoplax adhaerens]
          Length = 897

 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 95/319 (29%), Positives = 157/319 (49%), Gaps = 16/319 (5%)

Query: 131 VFSCGSSLCGVLGHGPETTQCV-SFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGD 189
           +F+ G ++ G LG G     C+   T ++  +   +  +S   NH   +LQ GQ+++CG 
Sbjct: 1   MFAWGKAIEGQLGLGGIDENCILKATHVDLTTNHTIKLISCGLNHTILLLQDGQIYSCGS 60

Query: 190 NSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTA-GLNFTGFLTIRGHVHTCGSNTHGQL 248
           N     G +  N+   R   ++A + +    V++ G N    +  +  ++  G N+ GQL
Sbjct: 61  NDYGQTGRQRNNKRFAR---IDAFESMRITNVSSNGANHNLAINDKNCIYAWGDNSDGQL 117

Query: 249 GHGDTLDRP---TPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGE 305
           G  D   +    TP+ I  L +  +VVQ+A G S+ LAV  +G V+S+GS     LG   
Sbjct: 118 GVTDQNLKQFYRTPRQIKSLSKF-AVVQVACGQSHSLAVINDGTVFSWGSNRYGQLGIDS 176

Query: 306 QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTL 365
               ++P+  Q  +  G ++V+++AG  H +A+ +SG + TWGK   G LG G       
Sbjct: 177 NVSSVEPK--QILKLSGFYIVQIAAGGAHSLAITNSGALLTWGKNSFGQLGLGTNDGVLS 234

Query: 366 PEPLSSLKS-HLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRIL 424
           P  +SSL+S H+A   C     T VL   G V+ FG    G LG     +S     P+++
Sbjct: 235 PTCVSSLRSQHIAYAACGEDH-TAVLTKEGGVFTFGAGSSGQLG--HNSLSHHC-SPQMV 290

Query: 425 DSLRAHHVSQISTGLYHTV 443
             L    V+QI+ G ++ +
Sbjct: 291 VDLMGIVVTQITCGRFYAL 309



 Score =  116 bits (290), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 76/252 (30%), Positives = 125/252 (49%), Gaps = 10/252 (3%)

Query: 219 KQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGP 278
           K ++ GLN T  L   G +++CGSN +GQ G      R     I   E +      + G 
Sbjct: 37  KLISCGLNHTILLLQDGQIYSCGSNDYGQTGRQRNNKRFA--RIDAFESMRITNVSSNGA 94

Query: 279 SYMLAVTGNGVVYSFGSGSNFCLGHGEQHDEL---QPRAIQTFRRKGIHVVRVSAGDEHV 335
           ++ LA+     +Y++G  S+  LG  +Q+ +     PR I++  +    VV+V+ G  H 
Sbjct: 95  NHNLAINDKNCIYAWGDNSDGQLGVTDQNLKQFYRTPRQIKSLSK--FAVVQVACGQSHS 152

Query: 336 VALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGS 395
           +A+ + G V++WG    G LG    +    P+ +  L     VQ+ A    +  + ++G+
Sbjct: 153 LAVINDGTVFSWGSNRYGQLGIDSNVSSVEPKQILKLSGFYIVQIAAGGAHSLAITNSGA 212

Query: 396 VYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFG 455
           +  +G   FG LG    G +D VL P  + SLR+ H++  + G  HT V+T  G +F FG
Sbjct: 213 LLTWGKNSFGQLGL---GTNDGVLSPTCVSSLRSQHIAYAACGEDHTAVLTKEGGVFTFG 269

Query: 456 DNERAQLGHDTL 467
                QLGH++L
Sbjct: 270 AGSSGQLGHNSL 281



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 82/273 (30%), Positives = 127/273 (46%), Gaps = 11/273 (4%)

Query: 116 ITTGRYHT-LLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSAS-EN 173
           I+ G  HT LL+ +  ++SCGS+  G  G      +   F RI+   +  +  VS++  N
Sbjct: 39  ISCGLNHTILLLQDGQIYSCGSNDYGQTGRQRNNKR---FARIDAFESMRITNVSSNGAN 95

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIF--RPRLVEALKGVPCKQVTAGLNFTGFL 231
           H   +     ++  GDNS    G  D N   F   PR +++L      QV  G + +  +
Sbjct: 96  HNLAINDKNCIYAWGDNSDGQLGVTDQNLKQFYRTPRQIKSLSKFAVVQVACGQSHSLAV 155

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
              G V + GSN +GQLG    +    PK I  L     +VQIAAG ++ LA+T +G + 
Sbjct: 156 INDGTVFSWGSNRYGQLGIDSNVSSVEPKQILKLSGF-YIVQIAAGGAHSLAITNSGALL 214

Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 351
           ++G  S   LG G     L P  + + R +  H+   + G++H   L   G V+T+G G 
Sbjct: 215 TWGKNSFGQLGLGTNDGVLSPTCVSSLRSQ--HIAYAACGEDHTAVLTKEGGVFTFGAGS 272

Query: 352 CGALGHGDEIDKTLPEPLSSLKSHLAVQV-CAR 383
            G LGH        P+ +  L   +  Q+ C R
Sbjct: 273 SGQLGHNSLSHHCSPQMVVDLMGIVVTQITCGR 305



 Score = 79.7 bits (195), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 68/238 (28%), Positives = 107/238 (44%), Gaps = 10/238 (4%)

Query: 241 GSNTHGQLGHGDTLDRPTPKSI-APLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNF 299
           G    GQLG G   +    K+    L    ++  I+ G ++ + +  +G +YS   GSN 
Sbjct: 5   GKAIEGQLGLGGIDENCILKATHVDLTTNHTIKLISCGLNHTILLLQDGQIYS--CGSND 62

Query: 300 CLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGD 359
               G Q +  +   I  F    I  V  S G  H +A++    +Y WG    G LG  D
Sbjct: 63  YGQTGRQRNNKRFARIDAFESMRITNVS-SNGANHNLAINDKNCIYAWGDNSDGQLGVTD 121

Query: 360 EIDKTL---PEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSD 416
           +  K     P  + SL     VQV   +  +  +++ G+V+ +G   +G LG  D  VS 
Sbjct: 122 QNLKQFYRTPRQIKSLSKFAVVQVACGQSHSLAVINDGTVFSWGSNRYGQLGI-DSNVSS 180

Query: 417 KVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPT 474
             + P+ +  L   ++ QI+ G  H++ +T+ G L  +G N   QLG  T  G L PT
Sbjct: 181 --VEPKQILKLSGFYIVQIAAGGAHSLAITNSGALLTWGKNSFGQLGLGTNDGVLSPT 236



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 39/156 (25%), Positives = 67/156 (42%), Gaps = 4/156 (2%)

Query: 324 HVVR-VSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCA 382
           H ++ +S G  H + L   G +Y+ G    G  G   + +      + + +S     V +
Sbjct: 34  HTIKLISCGLNHTILLLQDGQIYSCGSNDYGQTGR--QRNNKRFARIDAFESMRITNVSS 91

Query: 383 R-KRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYH 441
                   + D   +Y +G    G LG  D+ +      PR + SL    V Q++ G  H
Sbjct: 92  NGANHNLAINDKNCIYAWGDNSDGQLGVTDQNLKQFYRTPRQIKSLSKFAVVQVACGQSH 151

Query: 442 TVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF 477
           ++ V + G +F +G N   QLG D+    +EP +I 
Sbjct: 152 SLAVINDGTVFSWGSNRYGQLGIDSNVSSVEPKQIL 187


>gi|195168456|ref|XP_002025047.1| GL26839 [Drosophila persimilis]
 gi|194108492|gb|EDW30535.1| GL26839 [Drosophila persimilis]
          Length = 3840

 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 95/322 (29%), Positives = 151/322 (46%), Gaps = 14/322 (4%)

Query: 128  NSSVFSCGSSLCGVLGHGPETTQCVSFTR---INFPSAAHVVQVSASENHAAFVLQSGQV 184
            N  V++CG    G LG G   T  V       +        V V +   HA  +   G+V
Sbjct: 1883 NGKVYACGEGTNGRLGLG--VTHNVPLPHQLPVLHQYVVKKVAVHSGGKHALALTLDGKV 1940

Query: 185  FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNT 244
            F+ G+      GH +    + +PRLVE L+    + V  G + +  ++ +G ++T G   
Sbjct: 1941 FSWGEGEDGKLGHGNRTT-LDKPRLVETLRSKKIRDVACGSSHSAAISSQGELYTWGLGE 1999

Query: 245  HGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGP--SYMLAVTGNGVVYSFGSGSNFCLG 302
            +G+LGHGD   +  PK +A L     V+Q+A G   +  LA+T +G V+S+G G    LG
Sbjct: 2000 YGRLGHGDNATQLKPKLVAALAGR-RVIQVACGSRDAQTLALTEDGSVFSWGDGDFGKLG 2058

Query: 303  HGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEID 362
             G       P  I+  R  GI V+++  G +  +AL  +G V+TWGKG    LGHG +  
Sbjct: 2059 RGGSEGSDTPHEIE--RLSGIGVIQIECGAQFSLALTRAGEVWTWGKGDYYRLGHGGDQH 2116

Query: 363  KTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPR 422
               P+P+  L+    + V         + D G VY +G    G  G  +  V+ K   P 
Sbjct: 2117 VRKPQPIGGLRGRRVIHVAVGALHCLAVTDAGQVYAWGDNDHGQQGSGNTFVNKK---PA 2173

Query: 423  ILDSLRAHHVSQISTGLYHTVV 444
            ++  L A  V++++ G  H++ 
Sbjct: 2174 LVIGLDAVFVNRVACGSSHSIA 2195



 Score =  119 bits (297), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 98/347 (28%), Positives = 160/347 (46%), Gaps = 8/347 (2%)

Query: 129  SSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCG 188
            S+++  G +  G LG G E ++  + T     S    VQ++  E     V   G++F  G
Sbjct: 2977 STIYGWGHNHRGQLG-GLEGSRIKTPTPCEALSLLRPVQLAGGEQSLFAVTPDGKLFATG 3035

Query: 189  DNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQV--TAGLNFTGFLTIRGHVHTCGSNTHG 246
              S    G    +     P L+ +L+ V  K+V   +G      LT  G V+  G    G
Sbjct: 3036 YGSGGRLGVGGADSWAI-PTLLGSLQHVFVKKVAVNSGGKHCLALTTEGEVYAWGEGEDG 3094

Query: 247  QLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ 306
            +LGHG+ +    PK +  L  + +V  IA G ++  A+T +G V ++G G    LGHG+ 
Sbjct: 3095 KLGHGNRMSYDRPKLVEHLNGM-NVADIACGSAHSAAITASGHVLTWGKGRYGRLGHGDS 3153

Query: 307  HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP 366
             D+L+P+ ++         +   +GD   + +     V++WG G  G LG G      LP
Sbjct: 3154 EDQLRPQLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKLP 3213

Query: 367  EPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDS 426
              + SL     ++V    + +  L  +G+VY +    F  LG    G  D V RP+ + +
Sbjct: 3214 YKIESLAGLGVIKVECGSQFSVALTKSGAVYTWSKGDFHRLG---HGSVDHVRRPKKVAA 3270

Query: 427  LRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEP 473
            L+   +  I+TG  H V  +D G ++ +GDN+  QLG  T+     P
Sbjct: 3271 LQGKKIISIATGSLHCVACSDSGEVYTWGDNDEGQLGDGTVTAIQRP 3317



 Score =  118 bits (295), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 83/283 (29%), Positives = 137/283 (48%), Gaps = 9/283 (3%)

Query: 166  VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIF-RPRLVEALKGVPCKQVTAG 224
            V V++   H   +   G+V+  G+      GH   NR  + RP+LVE L G+    +  G
Sbjct: 3067 VAVNSGGKHCLALTTEGEVYAWGEGEDGKLGH--GNRMSYDRPKLVEHLNGMNVADIACG 3124

Query: 225  LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSV-VQIAAGPSYMLA 283
               +  +T  GHV T G   +G+LGHGD+ D+  P+ +  L    ++ +   +G +  L 
Sbjct: 3125 SAHSAAITASGHVLTWGKGRYGRLGHGDSEDQLRPQLVEALLGYRAIDIACGSGDAQTLC 3184

Query: 284  VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 343
            +T +  V+S+G G    LG G       P  I++    G+ V++V  G +  VAL  SG 
Sbjct: 3185 ITDDDNVWSWGDGDYGKLGRGGSDGCKLPYKIESL--AGLGVIKVECGSQFSVALTKSGA 3242

Query: 344  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 403
            VYTW KG    LGHG       P+ +++L+    + +           D+G VY +G   
Sbjct: 3243 VYTWSKGDFHRLGHGSVDHVRRPKKVAALQGKKIISIATGSLHCVACSDSGEVYTWGDND 3302

Query: 404  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT 446
             G LG    G    + RPR++ +L+  H+ +++ G  HT+ ++
Sbjct: 3303 EGQLG---DGTVTAIQRPRLVAALQGKHIVKVTCGSAHTLALS 3342



 Score =  111 bits (278), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 85/294 (28%), Positives = 139/294 (47%), Gaps = 17/294 (5%)

Query: 177  FVLQSGQVFTCGDNSSFCCGHRDT-NRPIFRPRLVEALKGVPCKQVT--AGLNFTGFLTI 233
             V Q+G+V+ CG+ ++   G   T N P+  P  +  L     K+V   +G      LT+
Sbjct: 1879 IVGQNGKVYACGEGTNGRLGLGVTHNVPL--PHQLPVLHQYVVKKVAVHSGGKHALALTL 1936

Query: 234  RGHVHTCGSNTHGQLGHGD--TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
             G V + G    G+LGHG+  TLD+P    +        +  +A G S+  A++  G +Y
Sbjct: 1937 DGKVFSWGEGEDGKLGHGNRTTLDKP---RLVETLRSKKIRDVACGSSHSAAISSQGELY 1993

Query: 292  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEHVVALDSSGYVYTWGK 349
            ++G G    LGHG+   +L+P+ +      G  V++V+ G  D   +AL   G V++WG 
Sbjct: 1994 TWGLGEYGRLGHGDNATQLKPKLVAAL--AGRRVIQVACGSRDAQTLALTEDGSVFSWGD 2051

Query: 350  GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGF 409
            G  G LG G       P  +  L     +Q+    + +  L   G V+ +G   +  LG 
Sbjct: 2052 GDFGKLGRGGSEGSDTPHEIERLSGIGVIQIECGAQFSLALTRAGEVWTWGKGDYYRLG- 2110

Query: 410  PDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 463
               G    V +P+ +  LR   V  ++ G  H + VTD G+++ +GDN+  Q G
Sbjct: 2111 --HGGDQHVRKPQPIGGLRGRRVIHVAVGALHCLAVTDAGQVYAWGDNDHGQQG 2162



 Score = 99.0 bits (245), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 81/251 (32%), Positives = 116/251 (46%), Gaps = 9/251 (3%)

Query: 119  GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSASENHAAF 177
            G++   L  +  VFS G    G LGHG  TT  +   R +    +  +  V+   +H+A 
Sbjct: 1928 GKHALALTLDGKVFSWGEGEDGKLGHGNRTT--LDKPRLVETLRSKKIRDVACGSSHSAA 1985

Query: 178  VLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN--FTGFLTIRG 235
            +   G+++T G       GH D N    +P+LV AL G    QV  G     T  LT  G
Sbjct: 1986 ISSQGELYTWGLGEYGRLGHGD-NATQLKPKLVAALAGRRVIQVACGSRDAQTLALTEDG 2044

Query: 236  HVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 295
             V + G    G+LG G +    TP  I  L  +G V+QI  G  + LA+T  G V+++G 
Sbjct: 2045 SVFSWGDGDFGKLGRGGSEGSDTPHEIERLSGIG-VIQIECGAQFSLALTRAGEVWTWGK 2103

Query: 296  GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGAL 355
            G  + LGHG      +P+ I   R  G  V+ V+ G  H +A+  +G VY WG    G  
Sbjct: 2104 GDYYRLGHGGDQHVRKPQPIGGLR--GRRVIHVAVGALHCLAVTDAGQVYAWGDNDHGQQ 2161

Query: 356  GHGDEIDKTLP 366
            G G+      P
Sbjct: 2162 GSGNTFVNKKP 2172



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 80/284 (28%), Positives = 127/284 (44%), Gaps = 14/284 (4%)

Query: 113  NMQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTR---INFPSAAHVVQV 168
             + + +G  H L L +   V++ G    G LGHG      +S+ R   +   +  +V  +
Sbjct: 3066 KVAVNSGGKHCLALTTEGEVYAWGEGEDGKLGHGNR----MSYDRPKLVEHLNGMNVADI 3121

Query: 169  SASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFT 228
            +    H+A +  SG V T G       GH D+   + RP+LVEAL G     +  G    
Sbjct: 3122 ACGSAHSAAITASGHVLTWGKGRYGRLGHGDSEDQL-RPQLVEALLGYRAIDIACGSGDA 3180

Query: 229  GFLTIRG--HVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTG 286
              L I    +V + G   +G+LG G +     P  I  L  +G V+++  G  + +A+T 
Sbjct: 3181 QTLCITDDDNVWSWGDGDYGKLGRGGSDGCKLPYKIESLAGLG-VIKVECGSQFSVALTK 3239

Query: 287  NGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYT 346
            +G VY++  G    LGHG      +P+ +     +G  ++ ++ G  H VA   SG VYT
Sbjct: 3240 SGAVYTWSKGDFHRLGHGSVDHVRRPKKVAAL--QGKKIISIATGSLHCVACSDSGEVYT 3297

Query: 347  WGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVL 390
            WG    G LG G       P  +++L+    V+V      T  L
Sbjct: 3298 WGDNDEGQLGDGTVTAIQRPRLVAALQGKHIVKVTCGSAHTLAL 3341



 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 72/245 (29%), Positives = 113/245 (46%), Gaps = 12/245 (4%)

Query: 237  VHTCGSNTHGQLG--HGDTLDRPT-PKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
            V   G N   QLG   G  +  PT  ++I+ L  +     IA G   +  V  NG VY+ 
Sbjct: 1834 VMVWGLNDKEQLGGLKGSKVKVPTFSQTISRLRPI----HIAGGSKSLFIVGQNGKVYAC 1889

Query: 294  GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 353
            G G+N  LG G  H+   P  +    +  +  V V +G +H +AL   G V++WG+G  G
Sbjct: 1890 GEGTNGRLGLGVTHNVPLPHQLPVLHQYVVKKVAVHSGGKHALALTLDGKVFSWGEGEDG 1949

Query: 354  ALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRG 413
             LGHG+      P  + +L+S     V      +  +   G +Y +G   +G LG  D  
Sbjct: 1950 KLGHGNRTTLDKPRLVETLRSKKIRDVACGSSHSAAISSQGELYTWGLGEYGRLGHGDNA 2009

Query: 414  VSDKVLRPRILDSLRAHHVSQISTGLY--HTVVVTDRGRLFGFGDNERAQLGHDTLRGCL 471
                 L+P+++ +L    V Q++ G     T+ +T+ G +F +GD +  +LG     G  
Sbjct: 2010 TQ---LKPKLVAALAGRRVIQVACGSRDAQTLALTEDGSVFSWGDGDFGKLGRGGSEGSD 2066

Query: 472  EPTEI 476
             P EI
Sbjct: 2067 TPHEI 2071



 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 75/258 (29%), Positives = 125/258 (48%), Gaps = 16/258 (6%)

Query: 224  GLNFTGFLTIRGHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSY 280
             L++ G  TI G     G N  GQLG   G  +  PTP ++++ L  V    Q+A G   
Sbjct: 2970 ALSWGGASTIYG----WGHNHRGQLGGLEGSRIKTPTPCEALSLLRPV----QLAGGEQS 3021

Query: 281  MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 340
            + AVT +G +++ G GS   LG G       P  + + +   +  V V++G +H +AL +
Sbjct: 3022 LFAVTPDGKLFATGYGSGGRLGVGGADSWAIPTLLGSLQHVFVKKVAVNSGGKHCLALTT 3081

Query: 341  SGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 400
             G VY WG+G  G LGHG+ +    P+ +  L       +      +  +  +G V  +G
Sbjct: 3082 EGEVYAWGEGEDGKLGHGNRMSYDRPKLVEHLNGMNVADIACGSAHSAAITASGHVLTWG 3141

Query: 401  WMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDNE 458
               +G LG  D   S+  LRP+++++L  +    I+  +G   T+ +TD   ++ +GD +
Sbjct: 3142 KGRYGRLGHGD---SEDQLRPQLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGD 3198

Query: 459  RAQLGHDTLRGCLEPTEI 476
              +LG     GC  P +I
Sbjct: 3199 YGKLGRGGSDGCKLPYKI 3216



 Score = 43.9 bits (102), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 34/135 (25%), Positives = 63/135 (46%), Gaps = 5/135 (3%)

Query: 332  DEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 391
            D+  ++   +  +Y WG  + G LG  +      P P  +L     VQ+   ++  F + 
Sbjct: 2967 DDWALSWGGASTIYGWGHNHRGQLGGLEGSRIKTPTPCEALSLLRPVQLAGGEQSLFAVT 3026

Query: 392  DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRG 449
              G ++     G+GS G    G +D    P +L SL+   V +++  +G  H + +T  G
Sbjct: 3027 PDGKLFA---TGYGSGGRLGVGGADSWAIPTLLGSLQHVFVKKVAVNSGGKHCLALTTEG 3083

Query: 450  RLFGFGDNERAQLGH 464
             ++ +G+ E  +LGH
Sbjct: 3084 EVYAWGEGEDGKLGH 3098


>gi|413946332|gb|AFW78981.1| putative regulator of chromosome condensation (RCC1) family protein
           [Zea mays]
          Length = 1009

 Score =  120 bits (301), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 99/323 (30%), Positives = 147/323 (45%), Gaps = 20/323 (6%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V Q++    H A   + G+VF  G+      GH  T+  I RP+LVEAL     + V  G
Sbjct: 245 VQQIACGYRHIALTTRQGEVFAWGEELGGRLGH-GTDADISRPKLVEALAVSNVEYVACG 303

Query: 225 LNFTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSYM 281
              T  +T  G ++T G   +  G LGHG       PK ++ PLE V  V+ ++ G  + 
Sbjct: 304 EFHTCAITASGDLYTWGDGYYNAGLLGHGAGTSHWLPKRVSGPLEGV-QVLSVSCGSWHS 362

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS- 340
              T +G V++FG G+   LGHG +H    P+ ++T    G   ++V+ G  H  A+   
Sbjct: 363 ALTTSSGKVFTFGDGTFGALGHGNRHTVAYPKEVETL--SGFRTIKVACGLWHSAAIVET 420

Query: 341 ---------SGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 391
                    S  ++TWG G    LGHGD+  + +P  + SL  +   QV      T  L 
Sbjct: 421 TNQAGVNVISRKLFTWGAGDKNPLGHGDKDARLVPTCVQSLIDYNFHQVACGHSMTIALS 480

Query: 392 DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRL 451
            +G V+  G    G LG P    SD      + D L    V +IS G  H  V+T R  +
Sbjct: 481 TSGHVFTMGSSSNGQLGNPK---SDGKHPTPVQDRLAGELVEEISCGSCHVAVLTSRSEV 537

Query: 452 FGFGDNERAQLGHDTLRGCLEPT 474
           + +G     +LGH  +    +PT
Sbjct: 538 YTWGMGANGRLGHGGVEDKKKPT 560



 Score =  104 bits (260), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 93/291 (31%), Positives = 134/291 (46%), Gaps = 20/291 (6%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSL--CGVLGHGPETTQCVSFTRINFP-SAAHVVQVSAS 171
           +  G +HT  I+ S  +++ G      G+LGHG  T+  +   R++ P     V+ VS  
Sbjct: 300 VACGEFHTCAITASGDLYTWGDGYYNAGLLGHGAGTSHWLP-KRVSGPLEGVQVLSVSCG 358

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL------ 225
             H+A    SG+VFT GD +    GH + +   + P+ VE L G    +V  GL      
Sbjct: 359 SWHSALTTSSGKVFTFGDGTFGALGHGNRHTVAY-PKEVETLSGFRTIKVACGLWHSAAI 417

Query: 226 ----NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 281
               N  G   I   + T G+     LGHGD   R  P  +  L +  +  Q+A G S  
Sbjct: 418 VETTNQAGVNVISRKLFTWGAGDKNPLGHGDKDARLVPTCVQSLIDY-NFHQVACGHSMT 476

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 341
           +A++ +G V++ GS SN  LG+  + D   P  +Q  R  G  V  +S G  HV  L S 
Sbjct: 477 IALSTSGHVFTMGSSSNGQLGN-PKSDGKHPTPVQD-RLAGELVEEISCGSCHVAVLTSR 534

Query: 342 GYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKS-HLAVQVCARKRKTFVLV 391
             VYTWG G  G LGHG   DK  P  + +LK  H+    C     T + +
Sbjct: 535 SEVYTWGMGANGRLGHGGVEDKKKPTLVEALKDRHVKSIACGSNFTTCICI 585



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 79/285 (27%), Positives = 130/285 (45%), Gaps = 17/285 (5%)

Query: 190 NSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLG 249
           ++++ C   D    I  P+ +E+   +  +Q+  G       T +G V   G    G+LG
Sbjct: 221 SANYLCSKAD----ILIPKPLESDVVLDVQQIACGYRHIALTTRQGEVFAWGEELGGRLG 276

Query: 250 HGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG--SNFCLGHGEQH 307
           HG   D   PK +  L  V +V  +A G  +  A+T +G +Y++G G  +   LGHG   
Sbjct: 277 HGTDADISRPKLVEAL-AVSNVEYVACGEFHTCAITASGDLYTWGDGYYNAGLLGHGAGT 335

Query: 308 DELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPE 367
               P+ + +   +G+ V+ VS G  H     SSG V+T+G G  GALGHG+      P+
Sbjct: 336 SHWLPKRV-SGPLEGVQVLSVSCGSWHSALTTSSGKVFTFGDGTFGALGHGNRHTVAYPK 394

Query: 368 PLSSLKSHLAVQVCARKRKTFVLVDTGSVYG--------FGWMGFGSLGFPDRGVSDKVL 419
            + +L     ++V      +  +V+T +  G        F W G G       G  D  L
Sbjct: 395 EVETLSGFRTIKVACGLWHSAAIVETTNQAGVNVISRKLFTW-GAGDKNPLGHGDKDARL 453

Query: 420 RPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 464
            P  + SL  ++  Q++ G   T+ ++  G +F  G +   QLG+
Sbjct: 454 VPTCVQSLIDYNFHQVACGHSMTIALSTSGHVFTMGSSSNGQLGN 498



 Score = 96.3 bits (238), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 98/347 (28%), Positives = 152/347 (43%), Gaps = 24/347 (6%)

Query: 114 MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSAS 171
            QI  G  H  L +    VF+ G  L G LGHG  T   +S  + +   + ++V  V+  
Sbjct: 246 QQIACGYRHIALTTRQGEVFAWGEELGGRLGHG--TDADISRPKLVEALAVSNVEYVACG 303

Query: 172 ENHAAFVLQSGQVFTCGDN--SSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
           E H   +  SG ++T GD   ++   GH          R+   L+GV    V+ G   + 
Sbjct: 304 EFHTCAITASGDLYTWGDGYYNAGLLGHGAGTSHWLPKRVSGPLEGVQVLSVSCGSWHSA 363

Query: 230 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV----- 284
             T  G V T G  T G LGHG+      PK +  L      +++A G  +  A+     
Sbjct: 364 LTTSSGKVFTFGDGTFGALGHGNRHTVAYPKEVETLSGF-RTIKVACGLWHSAAIVETTN 422

Query: 285 -TGNGVV----YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 339
             G  V+    +++G+G    LGHG++   L P  +Q+      H  +V+ G    +AL 
Sbjct: 423 QAGVNVISRKLFTWGAGDKNPLGHGDKDARLVPTCVQSLIDYNFH--QVACGHSMTIALS 480

Query: 340 SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSS-LKSHLAVQVCARKRKTFVLVDTGSVYG 398
           +SG+V+T G    G LG+  + D   P P+   L   L  ++        VL     VY 
Sbjct: 481 TSGHVFTMGSSSNGQLGN-PKSDGKHPTPVQDRLAGELVEEISCGSCHVAVLTSRSEVYT 539

Query: 399 FGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVV 445
           +G    G LG    GV DK  +P ++++L+  HV  I+ G   T  +
Sbjct: 540 WGMGANGRLGHG--GVEDKK-KPTLVEALKDRHVKSIACGSNFTTCI 583



 Score = 62.4 bits (150), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 49/201 (24%), Positives = 87/201 (43%), Gaps = 8/201 (3%)

Query: 277 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVV 336
           G  Y+       ++ + GS +  C     + D L P+ +++     + V +++ G  H+ 
Sbjct: 203 GDVYVWGEVWTDMIPAEGSANYLC----SKADILIPKPLES--DVVLDVQQIACGYRHIA 256

Query: 337 ALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSV 396
                G V+ WG+   G LGHG + D + P+ + +L       V   +  T  +  +G +
Sbjct: 257 LTTRQGEVFAWGEELGGRLGHGTDADISRPKLVEALAVSNVEYVACGEFHTCAITASGDL 316

Query: 397 YGFGWMGFGSLGFPDRGV-SDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFG 455
           Y +G  G+ + G    G  +   L  R+   L    V  +S G +H+ + T  G++F FG
Sbjct: 317 YTWG-DGYYNAGLLGHGAGTSHWLPKRVSGPLEGVQVLSVSCGSWHSALTTSSGKVFTFG 375

Query: 456 DNERAQLGHDTLRGCLEPTEI 476
           D     LGH        P E+
Sbjct: 376 DGTFGALGHGNRHTVAYPKEV 396


>gi|148672794|gb|EDL04741.1| mCG16651 [Mus musculus]
          Length = 462

 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 81/260 (31%), Positives = 133/260 (51%), Gaps = 6/260 (2%)

Query: 206 RPRLVEA-LKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP 264
           +PR ++A   G+   Q  +G + +  L     V++CG N+ GQLG         P+ I  
Sbjct: 11  KPRRLKAGTSGIELLQAASGEHHSLLLFSNHRVYSCGDNSWGQLGQRRDQSTERPEPIQA 70

Query: 265 LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGE-QHDELQPRAIQTFRRKGI 323
           L ++  V  ++ G  + +AV   G V+++G+GS   LG GE +     P  I+     GI
Sbjct: 71  LNDL-HVDLVSCGKEHSVAVCHKGKVFAWGAGSEGQLGIGEFKEISFMPTKIKAL--AGI 127

Query: 324 HVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG-DEIDKTLPEPLSSLKSHLAVQVCA 382
            +++VS G  H +AL   G+V++WG+   G LG G +   + +P+ + SL+     QV A
Sbjct: 128 KIIQVSCGHYHSLALSEDGHVFSWGRNSEGQLGLGKNSRSQAIPQKVKSLEGIPLAQVAA 187

Query: 383 RKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHT 442
               +F L  TG+ +G+G    G L      V +++ +P  + +L+   V  IS G  HT
Sbjct: 188 GGTHSFALSLTGTSFGWGSNRSGQLALSGNKVKEQIYKPHSIGALKNLSVIYISCGYEHT 247

Query: 443 VVVTDRGRLFGFGDNERAQL 462
            V+T+ G++F FG N   QL
Sbjct: 248 AVLTEEGQVFTFGGNSSGQL 267



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 83/299 (27%), Positives = 135/299 (45%), Gaps = 23/299 (7%)

Query: 114 MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHV 165
           +Q  +G +H+LL+ SN  V+SCG +  G LG         PE  Q ++          HV
Sbjct: 25  LQAASGEHHSLLLFSNHRVYSCGDNSWGQLGQRRDQSTERPEPIQALN--------DLHV 76

Query: 166 VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 225
             VS  + H+  V   G+VF  G  S    G  +     F P  ++AL G+   QV+ G 
Sbjct: 77  DLVSCGKEHSVAVCHKGKVFAWGAGSEGQLGIGEFKEISFMPTKIKALAGIKIIQVSCGH 136

Query: 226 NFTGFLTIRGHVHTCGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 284
             +  L+  GHV + G N+ GQLG G ++  +  P+ +  LE +  + Q+AAG ++  A+
Sbjct: 137 YHSLALSEDGHVFSWGRNSEGQLGLGKNSRSQAIPQKVKSLEGI-PLAQVAAGGTHSFAL 195

Query: 285 TGNGVVYSFGSGSNFCL---GHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 341
           +  G  + +GS  +  L   G+  +    +P +I     K + V+ +S G EH   L   
Sbjct: 196 SLTGTSFGWGSNRSGQLALSGNKVKEQIYKPHSIGAL--KNLSVIYISCGYEHTAVLTEE 253

Query: 342 GYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 400
           G V+T+G    G L       +  P+ +  +   ++   CA       +  TG V   G
Sbjct: 254 GQVFTFGGNSSGQLQPSPRSGQRGPQLIEGIGGRVSQIECASYHTIAYVYTTGQVVSLG 312



 Score = 95.1 bits (235), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 80/301 (26%), Positives = 147/301 (48%), Gaps = 14/301 (4%)

Query: 161 SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQ 220
           S   ++Q ++ E+H+  +  + +V++CGDNS    G R  ++   RP  ++AL  +    
Sbjct: 20  SGIELLQAASGEHHSLLLFSNHRVYSCGDNSWGQLGQRR-DQSTERPEPIQALNDLHVDL 78

Query: 221 VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRP-TPKSIAPLEEVGSVVQIAAGPS 279
           V+ G   +  +  +G V   G+ + GQLG G+  +    P  I  L  +  ++Q++ G  
Sbjct: 79  VSCGKEHSVAVCHKGKVFAWGAGSEGQLGIGEFKEISFMPTKIKALAGI-KIIQVSCGHY 137

Query: 280 YMLAVTGNGVVYSFGSGSNFCLGHGEQ-HDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
           + LA++ +G V+S+G  S   LG G+    +  P+ +++   +GI + +V+AG  H  AL
Sbjct: 138 HSLALSEDGHVFSWGRNSEGQLGLGKNSRSQAIPQKVKSL--EGIPLAQVAAGGTHSFAL 195

Query: 339 DSSGYVYTWGKGYCGALG-HGDEIDKTL--PEPLSSLKSHLAVQVCARKRKTFVLVDTGS 395
             +G  + WG    G L   G+++ + +  P  + +LK+   + +      T VL + G 
Sbjct: 196 SLTGTSFGWGSNRSGQLALSGNKVKEQIYKPHSIGALKNLSVIYISCGYEHTAVLTEEGQ 255

Query: 396 VYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV-VTDRGRLFGF 454
           V+ FG    G L    R        P++++ +    VSQI    YHT+  V   G++   
Sbjct: 256 VFTFGGNSSGQLQPSPRSGQRG---PQLIEGIGG-RVSQIECASYHTIAYVYTTGQVVSL 311

Query: 455 G 455
           G
Sbjct: 312 G 312



 Score = 62.0 bits (149), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 41/154 (26%), Positives = 75/154 (48%), Gaps = 5/154 (3%)

Query: 311 QPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLS 370
           +PR ++     GI +++ ++G+ H + L S+  VY+ G    G LG   +     PEP+ 
Sbjct: 11  KPRRLKA-GTSGIELLQAASGEHHSLLLFSNHRVYSCGDNSWGQLGQRRDQSTERPEPIQ 69

Query: 371 SLKS-HLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRA 429
           +L   H+ +  C  K  +  +   G V+ +G    G LG  +    +    P  + +L  
Sbjct: 70  ALNDLHVDLVSCG-KEHSVAVCHKGKVFAWGAGSEGQLGIGE--FKEISFMPTKIKALAG 126

Query: 430 HHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 463
             + Q+S G YH++ +++ G +F +G N   QLG
Sbjct: 127 IKIIQVSCGHYHSLALSEDGHVFSWGRNSEGQLG 160


>gi|339234781|ref|XP_003378945.1| putative HECT-domain protein [Trichinella spiralis]
 gi|316978479|gb|EFV61464.1| putative HECT-domain protein [Trichinella spiralis]
          Length = 994

 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 96/355 (27%), Positives = 175/355 (49%), Gaps = 25/355 (7%)

Query: 124 LLISNSSVFSCGSSLCGVLGHGPETTQCV-SFTRI-NFPSAAHVVQVSASENHAAFVLQS 181
           L++ + S+  CG++  G LG G    + V S T + +  +   + Q++   +H+  +L  
Sbjct: 11  LILKSMSLLCCGNTSDGQLGLGGIAEENVRSLTLVESTKNFLKIRQIACGRHHSVMLLDD 70

Query: 182 GQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG-VPCKQVTAGLNFTGF---------L 231
           G VF+CG+N  +  GH    R   +P L E L   +  KQ   G++             L
Sbjct: 71  GSVFSCGNNDFYQLGHDGIKR---KPNLYENLHWYIDVKQSFVGIHVISVACGDAHCVAL 127

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEV--GSVVQIAAGPSYMLAV-TGNG 288
           T  GH+ + GSN +GQLG  + ++         ++E+   ++VQIA G ++ LA+ + +G
Sbjct: 128 TNDGHLFSWGSNVYGQLG-VERMNVVAKARYPRIQEINLANIVQIACGSNHSLALESTDG 186

Query: 289 VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 348
           V++++G   +  LG G +   + P  +   +  GI + +++AG  H + L  SG V+ WG
Sbjct: 187 VLHAWGLNDHGQLGIGTRESFIGPTTVN--KLMGIPICQLAAGASHSLVLTPSGTVFGWG 244

Query: 349 KGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLG 408
           K   G +G  ++ D   P  +  L++   +++   +  +  +  TG ++ FG   +G LG
Sbjct: 245 KNMFGQIGQNEQRDILYPSLVKLLRTQKVIRLACGEDFSVAVTATGGLFTFGAGTYGQLG 304

Query: 409 FPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 463
               G  +  L P+ +  L    V  ++ G  HT+ +T+  +L+ FG N   QLG
Sbjct: 305 ---HGNQNSELFPKQVMELMGSVVLDVACGRCHTLAITE-NKLYAFGLNTSGQLG 355



 Score =  105 bits (261), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 89/327 (27%), Positives = 154/327 (47%), Gaps = 20/327 (6%)

Query: 94  LRFLQSVEHSSDIVETSAGNMQITTGRYHT-LLISNSSVFSCGSSLCGVLGHGPETTQCV 152
           +R L  VE + + ++      QI  GR+H+ +L+ + SVFSCG++    LGH     +  
Sbjct: 39  VRSLTLVESTKNFLKIR----QIACGRHHSVMLLDDGSVFSCGNNDFYQLGHDGIKRKPN 94

Query: 153 SFTRINFP-------SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTN--RP 203
            +  +++           HV+ V+  + H   +   G +F+ G N     G    N    
Sbjct: 95  LYENLHWYIDVKQSFVGIHVISVACGDAHCVALTNDGHLFSWGSNVYGQLGVERMNVVAK 154

Query: 204 IFRPRLVEALKGVPCKQVTAGLNFTGFL-TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSI 262
              PR+ E +      Q+  G N +  L +  G +H  G N HGQLG G       P ++
Sbjct: 155 ARYPRIQE-INLANIVQIACGSNHSLALESTDGVLHAWGLNDHGQLGIGTRESFIGPTTV 213

Query: 263 APLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKG 322
             L  +  + Q+AAG S+ L +T +G V+ +G      +G  EQ D L P  ++  R + 
Sbjct: 214 NKLMGI-PICQLAAGASHSLVLTPSGTVFGWGKNMFGQIGQNEQRDILYPSLVKLLRTQ- 271

Query: 323 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCA 382
             V+R++ G++  VA+ ++G ++T+G G  G LGHG++  +  P+ +  L   + + V  
Sbjct: 272 -KVIRLACGEDFSVAVTATGGLFTFGAGTYGQLGHGNQNSELFPKQVMELMGSVVLDVAC 330

Query: 383 RKRKTFVLVDTGSVYGFGWMGFGSLGF 409
            +  T  + +   +Y FG    G LG 
Sbjct: 331 GRCHTLAITEN-KLYAFGLNTSGQLGL 356



 Score = 84.7 bits (208), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 68/261 (26%), Positives = 120/261 (45%), Gaps = 16/261 (6%)

Query: 240 CGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV---QIAAGPSYMLAVTGNGVVYSFGSG 296
           CG+ + GQLG G   +    +S+  +E   + +   QIA G  + + +  +G V+S G+ 
Sbjct: 21  CGNTSDGQLGLGGIAEENV-RSLTLVESTKNFLKIRQIACGRHHSVMLLDDGSVFSCGNN 79

Query: 297 SNFCLGHG------EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKG 350
             + LGH         ++ L           GIHV+ V+ GD H VAL + G++++WG  
Sbjct: 80  DFYQLGHDGIKRKPNLYENLHWYIDVKQSFVGIHVISVACGDAHCVALTNDGHLFSWGSN 139

Query: 351 YCGALG--HGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDT-GSVYGFGWMGFGSL 407
             G LG    + + K     +  +     VQ+      +  L  T G ++ +G    G L
Sbjct: 140 VYGQLGVERMNVVAKARYPRIQEINLANIVQIACGSNHSLALESTDGVLHAWGLNDHGQL 199

Query: 408 GFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTL 467
           G    G  +  + P  ++ L    + Q++ G  H++V+T  G +FG+G N   Q+G +  
Sbjct: 200 GI---GTRESFIGPTTVNKLMGIPICQLAAGASHSLVLTPSGTVFGWGKNMFGQIGQNEQ 256

Query: 468 RGCLEPTEIFIQEMEEDTGLA 488
           R  L P+ + +   ++   LA
Sbjct: 257 RDILYPSLVKLLRTQKVIRLA 277


>gi|158253947|gb|AAI48319.1| HERC2 protein [Homo sapiens]
          Length = 703

 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 84/253 (33%), Positives = 126/253 (49%), Gaps = 9/253 (3%)

Query: 207 PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHG-DTLDRPTPKSIAPL 265
           P   E L  +   QV  G      +T+ G V+ CG  T+G+LG G  +   P P+ I  L
Sbjct: 450 PSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITAL 509

Query: 266 EE-VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH 324
              V   V + +G  +  A+T +G V+S+G G +  LGH  + +  +PR I+  + K I 
Sbjct: 510 SSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIR 569

Query: 325 VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVC--A 382
              ++ G  H  AL SSG +YTWG G  G LGHGD   +  P+ +  L  H  +QV   +
Sbjct: 570 --DIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGS 627

Query: 383 RKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHT 442
           R  +T  L D G V+ +G   FG LG   RG S+    P+ ++ L    V QI  G   +
Sbjct: 628 RDAQTLALTDEGLVFSWGDGDFGKLG---RGGSEGCNIPQNIERLNGQGVCQIECGAQFS 684

Query: 443 VVVTDRGRLFGFG 455
           + +T  G ++ +G
Sbjct: 685 LALTKSGVVWTWG 697



 Score =  102 bits (255), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 80/264 (30%), Positives = 122/264 (46%), Gaps = 15/264 (5%)

Query: 219 KQVTAGLNFTGFLTIRGHVHTCGSNTHGQLG--HGDTLDRPT-PKSIAPLEEVGSVVQIA 275
           ++  AGL      TIR  V   G N   QLG   G  +  P+  ++++ L    +VVQ+A
Sbjct: 412 RKKAAGLESAA--TIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSAL----NVVQVA 465

Query: 276 AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQ-PRAIQTFRRKGIHVVRVSAGDEH 334
            G   + AVT  G VY+ G  +N  LG G     +  PR I       +  V V +G  H
Sbjct: 466 GGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRH 525

Query: 335 VVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 394
             AL   G V++WG+G  G LGH   ++   P  + +LK+     +      +  L  +G
Sbjct: 526 ATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSG 585

Query: 395 SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLY--HTVVVTDRGRLF 452
            +Y +G   +G LG  D       L+P+++  L  H V Q++ G     T+ +TD G +F
Sbjct: 586 ELYTWGLGEYGRLGHGDNTTQ---LKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVF 642

Query: 453 GFGDNERAQLGHDTLRGCLEPTEI 476
            +GD +  +LG     GC  P  I
Sbjct: 643 SWGDGDFGKLGRGGSEGCNIPQNI 666



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 73/246 (29%), Positives = 116/246 (47%), Gaps = 11/246 (4%)

Query: 161 SAAHVVQVSASENHAAFVLQSGQVFTCGD--NSSFCCGHRDTNRPIFRPRLVEALKGVPC 218
           SA +VVQV+        V   G+V+ CG+  N     G      PI  PR + AL     
Sbjct: 457 SALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPI--PRQITALSSYVV 514

Query: 219 KQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA 276
           K+V   +G      LT+ G V + G    G+LGH   ++   P+ I  L+    +  IA 
Sbjct: 515 KKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALK-TKRIRDIAC 573

Query: 277 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEH 334
           G S+  A+T +G +Y++G G    LGHG+   +L+P+ ++     G  V++V+ G  D  
Sbjct: 574 GSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLL--GHRVIQVACGSRDAQ 631

Query: 335 VVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 394
            +AL   G V++WG G  G LG G      +P+ +  L      Q+    + +  L  +G
Sbjct: 632 TLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSG 691

Query: 395 SVYGFG 400
            V+ +G
Sbjct: 692 VVWTWG 697



 Score = 92.0 bits (227), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 74/226 (32%), Positives = 116/226 (51%), Gaps = 12/226 (5%)

Query: 131 VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ---VSASENHAAFVLQSGQVFTC 187
           V++CG +  G LG G  ++  V   R     +++VV+   V +   HA  +   G+VF+ 
Sbjct: 480 VYACGEATNGRLGLGI-SSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSW 538

Query: 188 GDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQ 247
           G+      GH  +     +PRL+EALK    + +  G + +  LT  G ++T G   +G+
Sbjct: 539 GEGDDGKLGHF-SRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGR 597

Query: 248 LGHGDTLDRPTPKSIAPLEEVG-SVVQIAAGP--SYMLAVTGNGVVYSFGSGSNFCLGHG 304
           LGHGD   +  PK +  L  +G  V+Q+A G   +  LA+T  G+V+S+G G    LG G
Sbjct: 598 LGHGDNTTQLKPKMVKVL--LGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG 655

Query: 305 EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKG 350
                  P+ I+  R  G  V ++  G +  +AL  SG V+TWGKG
Sbjct: 656 GSEGCNIPQNIE--RLNGQGVCQIECGAQFSLALTKSGVVWTWGKG 699



 Score = 66.2 bits (160), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 57/180 (31%), Positives = 83/180 (46%), Gaps = 5/180 (2%)

Query: 119 GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
           GR+ T L  +  VFS G    G LGH      C     I       +  ++   +H+A +
Sbjct: 523 GRHATALTVDGKVFSWGEGDDGKLGHFSRMN-CDKPRLIEALKTKRIRDIACGSSHSAAL 581

Query: 179 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN--FTGFLTIRGH 236
             SG+++T G       GH D N    +P++V+ L G    QV  G     T  LT  G 
Sbjct: 582 TSSGELYTWGLGEYGRLGHGD-NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 640

Query: 237 VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 296
           V + G    G+LG G +     P++I  L   G V QI  G  + LA+T +GVV+++G G
Sbjct: 641 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTWGKG 699


>gi|452823021|gb|EME30035.1| E3 ubiquitin-protein ligase HERC2 [Galdieria sulphuraria]
          Length = 432

 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 104/338 (30%), Positives = 164/338 (48%), Gaps = 18/338 (5%)

Query: 116 ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           +  G   T  IS +  V++ GS   G LGH  ++ + +    +      ++V+VS   NH
Sbjct: 96  VAAGDSCTAAISLDGDVYTWGSGEYGKLGHNDDSNENLP-RLVEALKGKNIVKVSIGGNH 154

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEA-LKGVPCKQVTAGLNFTGFLTI 233
            A + + G ++  G  +S   G  +    +F PRL++  L+      V+ G + T  +T 
Sbjct: 155 MAAIDKDGHLYCWGRAASAGSGGTEH---VFIPRLIKGDLEKEKVISVSCGRSHTAAVTE 211

Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
           +G V T G+   G+LGHG+   +  PK +  L E   VV +A G  + + V  +G+ YS 
Sbjct: 212 KGEVWTWGNGYEGELGHGEKNSQYQPKKVQSLTE--KVVDVACGRDFTIFVCESGL-YSC 268

Query: 294 GSGSNFCLGHGEQHDELQPRAIQTFRRKGI-HVVRVSAGDEHVVALDSSGYVYTWGKGYC 352
           G+     LG G  H E   +  ++    G+  VV +SAGD HV AL   G VYTWG G  
Sbjct: 269 GADDYGQLGLGRSHGERFVQTPRSLSGTGLSDVVAISAGDYHVCALGRDGLVYTWGLGRE 328

Query: 353 GALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDR 412
           G LGHG++ D +L +P+ +L++   VQV      T  +   G +Y +G    G LG   R
Sbjct: 329 GQLGHGEKADCSLAKPVDNLRNFEIVQVACGGGHTAAVTKDGVLYTWGRGRDGQLG---R 385

Query: 413 G-----VSDKVLRPRILDSLRAHHVSQISTGLYHTVVV 445
           G     ++     P  + SL A  V  ++ G  H+ V+
Sbjct: 386 GGELESIASYRTSPVQVTSLPAGAVLYVTLGSDHSAVL 423



 Score =  119 bits (297), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 85/269 (31%), Positives = 125/269 (46%), Gaps = 6/269 (2%)

Query: 202 RPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKS 261
           RP  RP  VEAL G     V AG + T  +++ G V+T GS  +G+LGH D  +   P+ 
Sbjct: 77  RPADRPFPVEALSGKRIVYVAAGDSCTAAISLDGDVYTWGSGEYGKLGHNDDSNENLPRL 136

Query: 262 IAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRK 321
           +  L+   ++V+++ G ++M A+  +G +Y +G  ++   G G       PR I+    K
Sbjct: 137 VEALKGK-NIVKVSIGGNHMAAIDKDGHLYCWGRAAS--AGSGGTEHVFIPRLIKGDLEK 193

Query: 322 GIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVC 381
              V+ VS G  H  A+   G V+TWG GY G LGHG++  +  P+ + SL   +    C
Sbjct: 194 -EKVISVSCGRSHTAAVTEKGEVWTWGNGYEGELGHGEKNSQYQPKKVQSLTEKVVDVAC 252

Query: 382 ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYH 441
            R    FV      +Y  G   +G LG         V  PR L       V  IS G YH
Sbjct: 253 GRDFTIFVC--ESGLYSCGADDYGQLGLGRSHGERFVQTPRSLSGTGLSDVVAISAGDYH 310

Query: 442 TVVVTDRGRLFGFGDNERAQLGHDTLRGC 470
              +   G ++ +G     QLGH     C
Sbjct: 311 VCALGRDGLVYTWGLGREGQLGHGEKADC 339



 Score =  111 bits (278), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 106/349 (30%), Positives = 160/349 (45%), Gaps = 17/349 (4%)

Query: 120 RYHTLLISNSSVFSC-GSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
           R     + N ++ +  G +L G LG G E      F  +   S   +V V+A ++  A +
Sbjct: 48  RMKKAALENGTLLTTFGLNLIGQLGQGHERPADRPFP-VEALSGKRIVYVAAGDSCTAAI 106

Query: 179 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVH 238
              G V+T G       GH D +     PRLVEALKG    +V+ G N    +   GH++
Sbjct: 107 SLDGDVYTWGSGEYGKLGHNDDSNENL-PRLVEALKGKNIVKVSIGGNHMAAIDKDGHLY 165

Query: 239 TCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
             G       G G T     P+ I    E   V+ ++ G S+  AVT  G V+++G+G  
Sbjct: 166 CWGRAA--SAGSGGTEHVFIPRLIKGDLEKEKVISVSCGRSHTAAVTEKGEVWTWGNGYE 223

Query: 299 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG-- 356
             LGHGE++ + QP+ +Q+   K   VV V+ G +  + +  SG +Y+ G    G LG  
Sbjct: 224 GELGHGEKNSQYQPKKVQSLTEK---VVDVACGRDFTIFVCESG-LYSCGADDYGQLGLG 279

Query: 357 --HGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGV 414
             HG+   +T P  LS       V + A       L   G VY +G    G LG  ++  
Sbjct: 280 RSHGERFVQT-PRSLSGTGLSDVVAISAGDYHVCALGRDGLVYTWGLGREGQLGHGEK-- 336

Query: 415 SDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 463
           +D  L  + +D+LR   + Q++ G  HT  VT  G L+ +G     QLG
Sbjct: 337 ADCSL-AKPVDNLRNFEIVQVACGGGHTAAVTKDGVLYTWGRGRDGQLG 384



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 50/177 (28%), Positives = 81/177 (45%), Gaps = 8/177 (4%)

Query: 301 LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 360
           LG G +    +P  ++     G  +V V+AGD    A+   G VYTWG G  G LGH D+
Sbjct: 71  LGQGHERPADRPFPVEAL--SGKRIVYVAAGDSCTAAISLDGDVYTWGSGEYGKLGHNDD 128

Query: 361 IDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLR 420
            ++ LP  + +LK    V+V         +   G +Y      +G       G ++ V  
Sbjct: 129 SNENLPRLVEALKGKNIVKVSIGGNHMAAIDKDGHLY-----CWGRAASAGSGGTEHVFI 183

Query: 421 PRILD-SLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 476
           PR++   L    V  +S G  HT  VT++G ++ +G+    +LGH       +P ++
Sbjct: 184 PRLIKGDLEKEKVISVSCGRSHTAAVTEKGEVWTWGNGYEGELGHGEKNSQYQPKKV 240


>gi|407003324|gb|EKE19915.1| hypothetical protein ACD_8C00086G0006 [uncultured bacterium]
          Length = 2770

 Score =  120 bits (300), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 107/378 (28%), Positives = 168/378 (44%), Gaps = 23/378 (6%)

Query: 96  FLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFT 155
           F+ S +    I  +S G+       Y   L S+ +V++ G    GVLG+G      V + 
Sbjct: 627 FVPSSQEIKSIATSSGGSYG-----YSLALKSDKTVWAWGYGGSGVLGNGTGEQMLVGYP 681

Query: 156 RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 215
             +      V Q+SA E H+  +   G  +  GDN+    G+  T      P  V  L G
Sbjct: 682 VRDLTG---VEQISAGEGHSLALRSDGTAWAWGDNAYGMLGNNSTVTSSI-PVQVSGLTG 737

Query: 216 VPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA 275
           V    V AG   +  L   G V   G NT GQLG G T  R  P  ++ LE+V   + I+
Sbjct: 738 V--SSVKAGRLHSMALKSDGTVWAWGYNTEGQLGDGSTTQRLVPVQVSGLEDV---IAIS 792

Query: 276 AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHV 335
           AG  + + +  +G V+++G  SN  LG+      L P  +Q     G+ ++  SAG    
Sbjct: 793 AGDYHSMVIKSDGTVWAWGRNSNGQLGNNSTTGSLVP--VQVPGLTGVALI--SAGTNTS 848

Query: 336 VALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGS 395
            A+ S G    WG    G L  G  I + +P  +S      A+ +      + +L   G+
Sbjct: 849 AAVKSDGTALAWGSNTYGQLCDGSNIQRLIPVQVSEPVGVGALSMVVANSHSLILKLDGT 908

Query: 396 VYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFG 455
           V+G G   +G +G  +  ++D  +    + +L    V  IS GLYH++ +   G ++G+G
Sbjct: 909 VWGCGRNDYGPIG--NNSITDSKVP---VQTLGLAGVVSISAGLYHSMALKSDGTIWGWG 963

Query: 456 DNERAQLGHDTLRGCLEP 473
            N   QLG ++    L P
Sbjct: 964 YNGYGQLGDNSTTSRLAP 981



 Score =  103 bits (257), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 116/446 (26%), Positives = 194/446 (43%), Gaps = 43/446 (9%)

Query: 55  SLVDLAASQLCALHSIYAGMSRNVQIELLNRCNGN-WKRVLRFLQSVEHSS---DIVETS 110
           SLV +  S L  + SI A  S N    L  + +G  W         + ++S    +V   
Sbjct: 406 SLVPIQVSGLTGVTSISATSSNNYSHSLALKSDGTVWGWGYNSTGQLGNNSATQSLVPVQ 465

Query: 111 A----GNMQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHV 165
           A    G + I+ G  H++ L S+ + +  G +  G LG+   T Q  S   +  P  + V
Sbjct: 466 ALGLTGVVSISAGSNHSMALKSDGTAWIWGGNSDGQLGNN-STAQ--SLVPVQVPGLSGV 522

Query: 166 VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 225
             +SA   H+  +   G V+  G NSS   G+  T   +     ++ L G     V+AG 
Sbjct: 523 SAISAGNYHSMALKSDGTVWAWGRNSSGQLGNNSTTVSLVP---IQVLTGT--TSVSAGT 577

Query: 226 NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA--------------PLEEVGSV 271
             +  L   G V   G+N + ++     LD+  P   A                +E+ S+
Sbjct: 578 YHSMALKSDGAVWGWGNNEYKKIISNTNLDQLVPVKTAMNAYISDFNDGFVPSSQEIKSI 637

Query: 272 VQIAAGP-SYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 330
              + G   Y LA+  +  V+++G G +  LG+G     L    +    R    V ++SA
Sbjct: 638 ATSSGGSYGYSLALKSDKTVWAWGYGGSGVLGNGTGEQMLVGYPV----RDLTGVEQISA 693

Query: 331 GDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVL 390
           G+ H +AL S G  + WG    G LG+   +  ++P  +S L    +V+  A +  +  L
Sbjct: 694 GEGHSLALRSDGTAWAWGDNAYGMLGNNSTVTSSIPVQVSGLTGVSSVK--AGRLHSMAL 751

Query: 391 VDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGR 450
              G+V+ +G+   G LG    G + + L P  +  L    V  IS G YH++V+   G 
Sbjct: 752 KSDGTVWAWGYNTEGQLG---DGSTTQRLVPVQVSGLE--DVIAISAGDYHSMVIKSDGT 806

Query: 451 LFGFGDNERAQLGHDTLRGCLEPTEI 476
           ++ +G N   QLG+++  G L P ++
Sbjct: 807 VWAWGRNSNGQLGNNSTTGSLVPVQV 832



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 71/259 (27%), Positives = 122/259 (47%), Gaps = 16/259 (6%)

Query: 220 QVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPS 279
           QV AG      L   G V   G N +G+LG G T++R  P  ++ L EV +   I+A   
Sbjct: 272 QVVAGYYHNLALKSDGTVWAWGYNYYGRLGDGSTINRIVPVQVSGLTEVSA---ISAAFG 328

Query: 280 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 339
           + +A+  +G ++++G  +   LG+      L P  + T       V  +SAG ++ +A+ 
Sbjct: 329 HSMALKSDGTLWTWGYNNRGQLGNNSITQSLVPVQVLT------GVASISAGYDYSLAVK 382

Query: 340 SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKR--KTFVLVDTGSVY 397
           S G V+ WG+ Y G  G+   ID  +P  +S L    ++   +      +  L   G+V+
Sbjct: 383 SDGTVWAWGRNYYGQFGNNSTIDSLVPIQVSGLTGVTSISATSSNNYSHSLALKSDGTVW 442

Query: 398 GFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDN 457
           G+G+   G LG      + + L P  + +L    V  IS G  H++ +   G  + +G N
Sbjct: 443 GWGYNSTGQLG---NNSATQSLVP--VQALGLTGVVSISAGSNHSMALKSDGTAWIWGGN 497

Query: 458 ERAQLGHDTLRGCLEPTEI 476
              QLG+++    L P ++
Sbjct: 498 SDGQLGNNSTAQSLVPVQV 516


>gi|356539788|ref|XP_003538375.1| PREDICTED: uncharacterized protein LOC100794953 [Glycine max]
          Length = 1046

 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 92/305 (30%), Positives = 145/305 (47%), Gaps = 22/305 (7%)

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            HAA V + G+VF  G       G +  +  I  P++V++L G+  K V  G   T  LT
Sbjct: 314 KHAALVTKQGEVFCWGQGKWGRLGQK-IDMDISSPKIVDSLNGLHVKTVACGEYHTCALT 372

Query: 233 IRGHVHTCGSNT--HGQLGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSYMLAVTGNGV 289
             G V+T G++      L  G T  +  P+ +  PL+ + S+  +A G  +   V+  G 
Sbjct: 373 DSGEVYTWGNDVCCADLLNEGRTRSQWIPQRLGGPLDGI-SISSVACGEWHTAIVSSCGR 431

Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL----------- 338
           ++++G G+   LGHG+      P+ +++    G+ V   + G  H  A+           
Sbjct: 432 LFTYGDGTFGVLGHGDLRSYSSPKEVESL--NGLRVRSAACGSWHTAAIVEVMFDRFRYN 489

Query: 339 DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYG 398
            +SG ++TWG G  G LGH D  +K +P  ++ L  +  VQV   +  T  L + G V+ 
Sbjct: 490 SASGKLFTWGDGDEGRLGHVDNGNKIVPTRVTQLVDYDFVQVSCGRMLTVALTNMGKVFA 549

Query: 399 FGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNE 458
            G   +G LG P     DKV+   +   L+   V  ISTG YH  V+T  G ++ +G  E
Sbjct: 550 MGSAKYGQLGNPH--ARDKVV--IVEGQLKQEFVKVISTGSYHVAVLTSAGSVYTWGRGE 605

Query: 459 RAQLG 463
             QLG
Sbjct: 606 IGQLG 610



 Score = 98.2 bits (243), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 97/347 (27%), Positives = 154/347 (44%), Gaps = 25/347 (7%)

Query: 44  GSHGLYPQKFRSLVDLAASQLCALHSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHS 103
           G + L P+   S   L    + AL   +A +    Q E+     G W R+ + +     S
Sbjct: 289 GIYSLVPKLLESTAMLDVHNI-ALGGKHAALVTK-QGEVFCWGQGKWGRLGQKIDMDISS 346

Query: 104 SDIVETSAG--NMQITTGRYHTLLISNS-SVFSCGSSLC--GVLGHGPETTQCVSFTRIN 158
             IV++  G     +  G YHT  +++S  V++ G+ +C   +L  G   +Q +   R+ 
Sbjct: 347 PKIVDSLNGLHVKTVACGEYHTCALTDSGEVYTWGNDVCCADLLNEGRTRSQWIP-QRLG 405

Query: 159 FP-SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVP 217
            P     +  V+  E H A V   G++FT GD +    GH D  R    P+ VE+L G+ 
Sbjct: 406 GPLDGISISSVACGEWHTAIVSSCGRLFTYGDGTFGVLGHGDL-RSYSSPKEVESLNGLR 464

Query: 218 CKQVTAGLNFTG-----------FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 266
            +    G   T            + +  G + T G    G+LGH D  ++  P  +  L 
Sbjct: 465 VRSAACGSWHTAAIVEVMFDRFRYNSASGKLFTWGDGDEGRLGHVDNGNKIVPTRVTQLV 524

Query: 267 EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVV 326
           +    VQ++ G    +A+T  G V++ GS     LG+    D++    I   + K   V 
Sbjct: 525 DY-DFVQVSCGRMLTVALTNMGKVFAMGSAKYGQLGNPHARDKV---VIVEGQLKQEFVK 580

Query: 327 RVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
            +S G  HV  L S+G VYTWG+G  G LG GD  D+  P  + +L+
Sbjct: 581 VISTGSYHVAVLTSAGSVYTWGRGEIGQLGLGDTEDRYTPCFVEALR 627



 Score = 82.0 bits (201), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 72/277 (25%), Positives = 123/277 (44%), Gaps = 22/277 (7%)

Query: 207 PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 266
           P+L+E+   +    +  G      +T +G V   G    G+LG    +D  +PK +  L 
Sbjct: 295 PKLLESTAMLDVHNIALGGKHAALVTKQGEVFCWGQGKWGRLGQKIDMDISSPKIVDSLN 354

Query: 267 EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC----LGHGEQHDELQPRAIQTFRRKG 322
            +  V  +A G  +  A+T +G VY++G+  + C    L  G    +  P+ +      G
Sbjct: 355 GL-HVKTVACGEYHTCALTDSGEVYTWGN--DVCCADLLNEGRTRSQWIPQRLGG-PLDG 410

Query: 323 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCA 382
           I +  V+ G+ H   + S G ++T+G G  G LGHGD    + P+ + SL          
Sbjct: 411 ISISSVACGEWHTAIVSSCGRLFTYGDGTFGVLGHGDLRSYSSPKEVESLNGLRVRSAAC 470

Query: 383 RKRKTFVLVD-----------TGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHH 431
               T  +V+           +G ++ +G    G LG  D G  +K++  R+   L  + 
Sbjct: 471 GSWHTAAIVEVMFDRFRYNSASGKLFTWGDGDEGRLGHVDNG--NKIVPTRVTQ-LVDYD 527

Query: 432 VSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLR 468
             Q+S G   TV +T+ G++F  G  +  QLG+   R
Sbjct: 528 FVQVSCGRMLTVALTNMGKVFAMGSAKYGQLGNPHAR 564



 Score = 76.3 bits (186), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 65/221 (29%), Positives = 98/221 (44%), Gaps = 21/221 (9%)

Query: 271 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 330
           V  IA G  +   VT  G V+ +G G    LG     D   P+ + +    G+HV  V+ 
Sbjct: 306 VHNIALGGKHAALVTKQGEVFCWGQGKWGRLGQKIDMDISSPKIVDSL--NGLHVKTVAC 363

Query: 331 GDEHVVALDSSGYVYTWGKGYCGA--LGHGDEIDKTLPEPLSSLKSHLAVQ-VCARKRKT 387
           G+ H  AL  SG VYTWG   C A  L  G    + +P+ L      +++  V   +  T
Sbjct: 364 GEYHTCALTDSGEVYTWGNDVCCADLLNEGRTRSQWIPQRLGGPLDGISISSVACGEWHT 423

Query: 388 FVLVDTGSVYGFGWMGFGSLGFPD-RGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT 446
            ++   G ++ +G   FG LG  D R  S     P+ ++SL    V   + G +HT  + 
Sbjct: 424 AIVSSCGRLFTYGDGTFGVLGHGDLRSYSS----PKEVESLNGLRVRSAACGSWHTAAIV 479

Query: 447 ----DR-------GRLFGFGDNERAQLGHDTLRGCLEPTEI 476
               DR       G+LF +GD +  +LGH      + PT +
Sbjct: 480 EVMFDRFRYNSASGKLFTWGDGDEGRLGHVDNGNKIVPTRV 520



 Score = 68.2 bits (165), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 45/167 (26%), Positives = 77/167 (46%), Gaps = 2/167 (1%)

Query: 310 LQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPL 369
           L P+ +++     +H   ++ G +H   +   G V+ WG+G  G LG   ++D + P+ +
Sbjct: 293 LVPKLLESTAMLDVH--NIALGGKHAALVTKQGEVFCWGQGKWGRLGQKIDMDISSPKIV 350

Query: 370 SSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRA 429
            SL       V   +  T  L D+G VY +G     +    +     + +  R+   L  
Sbjct: 351 DSLNGLHVKTVACGEYHTCALTDSGEVYTWGNDVCCADLLNEGRTRSQWIPQRLGGPLDG 410

Query: 430 HHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 476
             +S ++ G +HT +V+  GRLF +GD     LGH  LR    P E+
Sbjct: 411 ISISSVACGEWHTAIVSSCGRLFTYGDGTFGVLGHGDLRSYSSPKEV 457



 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 63/225 (28%), Positives = 100/225 (44%), Gaps = 20/225 (8%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPS-----A 162
           +  G +HT ++S+   +F+ G    GVLGHG       P+  + ++  R+   +      
Sbjct: 416 VACGEWHTAIVSSCGRLFTYGDGTFGVLGHGDLRSYSSPKEVESLNGLRVRSAACGSWHT 475

Query: 163 AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 222
           A +V+V    +   +   SG++FT GD      GH D    I  P  V  L      QV+
Sbjct: 476 AAIVEVMF--DRFRYNSASGKLFTWGDGDEGRLGHVDNGNKIV-PTRVTQLVDYDFVQVS 532

Query: 223 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 282
            G   T  LT  G V   GS  +GQLG+    D+     I   +     V++ +  SY +
Sbjct: 533 CGRMLTVALTNMGKVFAMGSAKYGQLGNPHARDKVV---IVEGQLKQEFVKVISTGSYHV 589

Query: 283 AV-TGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVV 326
           AV T  G VY++G G    LG G+  D   P  ++  R + ++ +
Sbjct: 590 AVLTSAGSVYTWGRGEIGQLGLGDTEDRYTPCFVEALRDRQVNTI 634



 Score = 45.1 bits (105), Expect = 0.091,   Method: Compositional matrix adjust.
 Identities = 54/186 (29%), Positives = 77/186 (41%), Gaps = 18/186 (9%)

Query: 102 HSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPS 161
           H++ IVE     +     RY++   ++  +F+ G    G LGH     + V  TR+    
Sbjct: 474 HTAAIVE-----VMFDRFRYNS---ASGKLFTWGDGDEGRLGHVDNGNKIVP-TRVTQLV 524

Query: 162 AAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEA---LKGVPC 218
               VQVS        +   G+VF  G        +     P  R ++V     LK    
Sbjct: 525 DYDFVQVSCGRMLTVALTNMGKVFAMGSAK-----YGQLGNPHARDKVVIVEGQLKQEFV 579

Query: 219 KQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGP 278
           K ++ G      LT  G V+T G    GQLG GDT DR TP  +  L +   V  I  GP
Sbjct: 580 KVISTGSYHVAVLTSAGSVYTWGRGEIGQLGLGDTEDRYTPCFVEALRD-RQVNTITCGP 638

Query: 279 SYMLAV 284
           S+  A+
Sbjct: 639 SFTAAI 644


>gi|357166808|ref|XP_003580861.1| PREDICTED: uncharacterized protein LOC100835494 [Brachypodium
           distachyon]
          Length = 1068

 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 103/345 (29%), Positives = 162/345 (46%), Gaps = 22/345 (6%)

Query: 144 HGP-ETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNR 202
           HGP  TT  +    +       V  V+    HAA + +  +VFT G+  S   GH     
Sbjct: 242 HGPGATTDILVPKPLESNVMLDVSYVACGVKHAALITRQAEVFTWGEECSGRLGH-GAGT 300

Query: 203 PIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPK 260
            IF+PRL+E+L     + +  G   T  +T  G ++T G  TH  G LGHG T+    PK
Sbjct: 301 SIFQPRLLESLSICNVEIIACGEFHTCAVTATGDLYTWGDGTHNAGLLGHGSTVSHWIPK 360

Query: 261 SIA-PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFR 319
            ++ PLE +  V  ++ G  +   +T +G +Y+FG G+   LGHG +     P+ +++  
Sbjct: 361 RVSGPLEGL-QVSTVSCGTWHTALITSSGQLYTFGDGTFGALGHGNRETISYPKEVESL- 418

Query: 320 RKGIHVVRVSAGDEHVVAL---------DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLS 370
            KG+  + VS G  H  A+          SSG ++TWG G    LGHGD   K  P  + 
Sbjct: 419 -KGLRTISVSCGVWHSAAVVEVIMTQSNASSGKLFTWGDGDKYRLGHGDRSAKLKPTCVP 477

Query: 371 SLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRIL-DSLRA 429
           SL  +   +       T  L  +G ++  G   +G LG P+    +    PR++ D +  
Sbjct: 478 SLIDYNFHKSACGHTLTIGLTTSGHMFTVGSSVYGQLGNPN----NDGRYPRLVEDKVGG 533

Query: 430 HHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPT 474
             V +++ G YH  V+T+ G ++ +G     +LGH  +     PT
Sbjct: 534 GGVVEVACGSYHVAVLTNTGEVYTWGKGANGRLGHGDIADRKVPT 578



 Score = 89.4 bits (220), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 82/273 (30%), Positives = 132/273 (48%), Gaps = 22/273 (8%)

Query: 116 ITTGRYHTLLISNSS---VFSCGSSLCGVLGHGPETTQCVSFTRINFP-SAAHVVQVSAS 171
           I  G +HT  ++ +     +  G+   G+LGHG   +  +   R++ P     V  VS  
Sbjct: 319 IACGEFHTCAVTATGDLYTWGDGTHNAGLLGHGSTVSHWIP-KRVSGPLEGLQVSTVSCG 377

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGH--RDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
             H A +  SGQ++T GD +    GH  R+T   I  P+ VE+LKG+    V+ G+  + 
Sbjct: 378 TWHTALITSSGQLYTFGDGTFGALGHGNRET---ISYPKEVESLKGLRTISVSCGVWHSA 434

Query: 230 FL---------TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 280
            +            G + T G     +LGHGD   +  P  +  L +  +  + A G + 
Sbjct: 435 AVVEVIMTQSNASSGKLFTWGDGDKYRLGHGDRSAKLKPTCVPSLIDY-NFHKSACGHTL 493

Query: 281 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 340
            + +T +G +++ GS     LG+   +D   PR ++  +  G  VV V+ G  HV  L +
Sbjct: 494 TIGLTTSGHMFTVGSSVYGQLGN-PNNDGRYPRLVED-KVGGGGVVEVACGSYHVAVLTN 551

Query: 341 SGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
           +G VYTWGKG  G LGHGD  D+ +P  + +L+
Sbjct: 552 TGEVYTWGKGANGRLGHGDIADRKVPTLVEALR 584



 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 71/250 (28%), Positives = 120/250 (48%), Gaps = 17/250 (6%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSASEN 173
           ++ G +HT LI++S  +++ G    G LGHG   T  +S+ + +        + VS    
Sbjct: 374 VSCGTWHTALITSSGQLYTFGDGTFGALGHGNRET--ISYPKEVESLKGLRTISVSCGVW 431

Query: 174 HAAFVLQ---------SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           H+A V++         SG++FT GD   +  GH D +  + +P  V +L      +   G
Sbjct: 432 HSAAVVEVIMTQSNASSGKLFTWGDGDKYRLGHGDRSAKL-KPTCVPSLIDYNFHKSACG 490

Query: 225 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 284
              T  LT  GH+ T GS+ +GQLG+ +   R  P+ +      G VV++A G  ++  +
Sbjct: 491 HTLTIGLTTSGHMFTVGSSVYGQLGNPNNDGR-YPRLVEDKVGGGGVVEVACGSYHVAVL 549

Query: 285 TGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           T  G VY++G G+N  LGHG+  D   P  ++  R + +   R++ G     A+    +V
Sbjct: 550 TNTGEVYTWGKGANGRLGHGDIADRKVPTLVEALRDRSVK--RIACGSSFTAAISQHKWV 607

Query: 345 YTWGKGYCGA 354
               +  C A
Sbjct: 608 SGVEQSQCSA 617



 Score = 58.5 bits (140), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 51/177 (28%), Positives = 78/177 (44%), Gaps = 6/177 (3%)

Query: 302 GHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEI 361
           G G   D L P+ +++     + V  V+ G +H   +     V+TWG+   G LGHG   
Sbjct: 243 GPGATTDILVPKPLES--NVMLDVSYVACGVKHAALITRQAEVFTWGEECSGRLGHGAGT 300

Query: 362 DKTLPEPLSSLK-SHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLR 420
               P  L SL   ++ +  C  +  T  +  TG +Y +G  G  + G    G +     
Sbjct: 301 SIFQPRLLESLSICNVEIIACG-EFHTCAVTATGDLYTWG-DGTHNAGLLGHGSTVSHWI 358

Query: 421 P-RILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 476
           P R+   L    VS +S G +HT ++T  G+L+ FGD     LGH        P E+
Sbjct: 359 PKRVSGPLEGLQVSTVSCGTWHTALITSSGQLYTFGDGTFGALGHGNRETISYPKEV 415


>gi|391344583|ref|XP_003746575.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like
           [Metaseiulus occidentalis]
          Length = 1152

 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 82/251 (32%), Positives = 128/251 (50%), Gaps = 10/251 (3%)

Query: 207 PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 266
           PR +  L+G+  +Q+  G + T  LT  G V +CGSN H QLG   +  +P P +     
Sbjct: 42  PRSIPQLEGIRVRQIATGAHHTLVLTSHGRVLSCGSNDHDQLGQEVSTTKPEPVTAL--- 98

Query: 267 EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGE-QHDELQPRAIQTFRRKGIHV 325
           +   +VQ+  G  + +A+T  G VY +GS S   LG+GE Q   L PR ++T       V
Sbjct: 99  QCLRIVQVCCGQQHSMALTEAGQVYMWGSNSKGQLGNGEGQESRLSPRFVKTL--APFTV 156

Query: 326 VRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEID-KTLPEPLSSLKSHLAVQVCARK 384
           V+++ G  H +AL ++G +Y WG    G LG G   + + +P  +++L      Q+    
Sbjct: 157 VQIACGSNHCLALLNNGALYAWGDNGNGQLGIGTVGEPQRVPVEVTNLLGLPLSQIACGA 216

Query: 385 RKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV 444
             + VL  +G ++ +G   FG LG  D    D+   P +L +LR  HV  I+ G  H+  
Sbjct: 217 NHSMVLSKSGVIFVWGSNRFGQLGLSDN--KDRAF-PTLLKTLRQQHVKFIAAGGAHSAA 273

Query: 445 VTDRGRLFGFG 455
           +T  G +F FG
Sbjct: 274 LTAHGGVFTFG 284



 Score =  112 bits (281), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 105/352 (29%), Positives = 162/352 (46%), Gaps = 24/352 (6%)

Query: 115 QITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
           QI TG +HTL L S+  V SCGS+    LG    TT+    T +       +VQV   + 
Sbjct: 55  QIATGAHHTLVLTSHGRVLSCGSNDHDQLGQEVSTTKPEPVTALQ---CLRIVQVCCGQQ 111

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
           H+  + ++GQV+  G NS    G+ +       PR V+ L      Q+  G N    L  
Sbjct: 112 HSMALTEAGQVYMWGSNSKGQLGNGEGQESRLSPRFVKTLAPFTVVQIACGSNHCLALLN 171

Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG-SVVQIAAGPSYMLAVTGNGVVYS 292
            G ++  G N +GQLG G T+  P    +     +G  + QIA G ++ + ++ +GV++ 
Sbjct: 172 NGALYAWGDNGNGQLGIG-TVGEPQRVPVEVTNLLGLPLSQIACGANHSMVLSKSGVIFV 230

Query: 293 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 352
           +GS     LG  +  D   P  ++T R++  HV  ++AG  H  AL + G V+T+G  + 
Sbjct: 231 WGSNRFGQLGLSDNKDRAFPTLLKTLRQQ--HVKFIAAGGAHSAALTAHGGVFTFGWSFY 288

Query: 353 GALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDR 412
                  E+  +L    S+ +S LA       RK F L++      F    +GS G    
Sbjct: 289 ----ESHEVRISLRGTESNPQSALA-------RKLFSLIER----EFCRHSYGSYGQLGH 333

Query: 413 GVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDR-GRLFGFGDNERAQLG 463
           G  +  L P  +  L    ++QI+ G  HTV      G++F FG     QLG
Sbjct: 334 GSKNDQLTPMKIQELMGTTITQIALGRCHTVCYAPTVGKVFTFGLGGNGQLG 385



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 85/299 (28%), Positives = 132/299 (44%), Gaps = 46/299 (15%)

Query: 114 MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +Q+  G+ H++ ++ +  V+  GS+  G LG+G      +S   +   +   VVQ++   
Sbjct: 104 VQVCCGQQHSMALTEAGQVYMWGSNSKGQLGNGEGQESRLSPRFVKTLAPFTVVQIACGS 163

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
           NH   +L +G ++  GDN +   G      P   P  V  L G+P  Q+  G N +  L+
Sbjct: 164 NHCLALLNNGALYAWGDNGNGQLGIGTVGEPQRVPVEVTNLLGLPLSQIACGANHSMVLS 223

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
             G +   GSN  GQLG  D  DR  P  +  L +   V  IAAG ++  A+T +G V++
Sbjct: 224 KSGVIFVWGSNRFGQLGLSDNKDRAFPTLLKTLRQ-QHVKFIAAGGAHSAALTAHGGVFT 282

Query: 293 F---------------GSGSN----------------FC---------LGHGEQHDELQP 312
           F               G+ SN                FC         LGHG ++D+L P
Sbjct: 283 FGWSFYESHEVRISLRGTESNPQSALARKLFSLIEREFCRHSYGSYGQLGHGSKNDQLTP 342

Query: 313 RAIQTFRRKGIHVVRVSAGDEHVVALDSS-GYVYTWGKGYCGALGHGDEIDKTLPEPLS 370
             IQ     G  + +++ G  H V    + G V+T+G G  G LG    +  T P PL+
Sbjct: 343 MKIQEL--MGTTITQIALGRCHTVCYAPTVGKVFTFGLGGNGQLGSSVSMVST-PTPLA 398



 Score = 78.2 bits (191), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 58/176 (32%), Positives = 89/176 (50%), Gaps = 14/176 (7%)

Query: 293 FGSGSNFCLGHG--EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKG 350
           FG+ ++  LG G  E H    PR+I     +GI V +++ G  H + L S G V +    
Sbjct: 21  FGNTNSGELGLGGIEDHIVRVPRSIPQL--EGIRVRQIATGAHHTLVLTSHGRVLS---- 74

Query: 351 YCGALGH---GDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSL 407
            CG+  H   G E+  T PEP+++L+    VQVC  ++ +  L + G VY +G    G L
Sbjct: 75  -CGSNDHDQLGQEVSTTKPEPVTALQCLRIVQVCCGQQHSMALTEAGQVYMWGSNSKGQL 133

Query: 408 GFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 463
           G  +    +  L PR + +L    V QI+ G  H + + + G L+ +GDN   QLG
Sbjct: 134 G--NGEGQESRLSPRFVKTLAPFTVVQIACGSNHCLALLNNGALYAWGDNGNGQLG 187



 Score = 49.3 bits (116), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 30/78 (38%), Positives = 41/78 (52%), Gaps = 3/78 (3%)

Query: 398 GFGWMGFGSLGFPDRGVSDKVLR-PRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGD 456
           GFG    G LG    G+ D ++R PR +  L    V QI+TG +HT+V+T  GR+   G 
Sbjct: 20  GFGNTNSGELGL--GGIEDHIVRVPRSIPQLEGIRVRQIATGAHHTLVLTSHGRVLSCGS 77

Query: 457 NERAQLGHDTLRGCLEPT 474
           N+  QLG +      EP 
Sbjct: 78  NDHDQLGQEVSTTKPEPV 95


>gi|393912010|gb|EJD76548.1| hect domain and RLD 4, variant [Loa loa]
          Length = 1017

 Score =  119 bits (299), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 103/356 (28%), Positives = 164/356 (46%), Gaps = 29/356 (8%)

Query: 131 VFSCGSSLCGVLGHGPETT----QCVSFTRINF--PSAAHVVQVSA---SENHAAFVLQS 181
           VF C S   G L   P +     Q + F  + +  P+  H V V A    E H  F+   
Sbjct: 8   VFGCASD--GQLAFRPNSAGNDAQMMLFPHLVYGAPTGQHGVTVKAVASGEKHTLFLAND 65

Query: 182 GQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCG 241
           G+V++CG N +   G        +    V     V   Q++AG + +  ++  G +   G
Sbjct: 66  GKVWSCGSNYNGELGRGGVKEGSYTIYPVHISNAVRIIQISAGRSHSMAVSDDGRLFAWG 125

Query: 242 SNTHGQLG-HGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 300
           SN+HGQL   GD L   TPK +  L E    VQ+A G S+ +++ G G V+ +G  S+  
Sbjct: 126 SNSHGQLAMSGDILISDTPKRVPSLPE---TVQVACGASHTVSLNGGGRVFIWGQQSDGR 182

Query: 301 LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 360
           + H        P  ++ F    + ++++SAG+   +AL +SG ++ WG+   G LG+   
Sbjct: 183 IRHS-------PAEVELF--VSVPIIQISAGNLFTMALTASGTLFAWGRNEEGQLGNFTN 233

Query: 361 IDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLR 420
            D   P  + ++ S + V+ C     +  L   G V+  G   FG LG      S   +R
Sbjct: 234 RDVINPREVPNINSVVVVE-CGDSH-SIALTHEGRVFSCGSDSFGQLGCGQPSRSQNCMR 291

Query: 421 PRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 476
              +  +   HV++I+ G  HT+VV + G++  FG N   QLGH   R  + P  I
Sbjct: 292 G--ITEMLGSHVTRIACGRCHTIVVAN-GKMHTFGLNSNGQLGHGNTRNQITPRMI 344



 Score = 99.0 bits (245), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 86/312 (27%), Positives = 133/312 (42%), Gaps = 59/312 (18%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           + +G  HTL ++N   V+SCGS+  G LG G       +   ++  +A  ++Q+SA  +H
Sbjct: 52  VASGEKHTLFLANDGKVWSCGSNYNGELGRGGVKEGSYTIYPVHISNAVRIIQISAGRSH 111

Query: 175 AAFVLQSGQVFTCGDNSS------------------------------------------ 192
           +  V   G++F  G NS                                           
Sbjct: 112 SMAVSDDGRLFAWGSNSHGQLAMSGDILISDTPKRVPSLPETVQVACGASHTVSLNGGGR 171

Query: 193 -FCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHG 251
            F  G +   R    P  VE    VP  Q++AG  FT  LT  G +   G N  GQLG+ 
Sbjct: 172 VFIWGQQSDGRIRHSPAEVELFVSVPIIQISAGNLFTMALTASGTLFAWGRNEEGQLGNF 231

Query: 252 DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQ 311
              D   P+ +     + SVV +  G S+ +A+T  G V+S GS S   LG G      Q
Sbjct: 232 TNRDVINPREVP---NINSVVVVECGDSHSIALTHEGRVFSCGSDSFGQLGCG------Q 282

Query: 312 PRAIQTFRR-----KGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP 366
           P   Q   R      G HV R++ G  H + + ++G ++T+G    G LGHG+  ++  P
Sbjct: 283 PSRSQNCMRGITEMLGSHVTRIACGRCHTIVV-ANGKMHTFGLNSNGQLGHGNTRNQITP 341

Query: 367 EPLSSLKSHLAV 378
             + S+++  +V
Sbjct: 342 RMIDSVENVASV 353



 Score = 62.0 bits (149), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 54/177 (30%), Positives = 89/177 (50%), Gaps = 11/177 (6%)

Query: 100 VEHSSDIVE--TSAGNMQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTR 156
           + HS   VE   S   +QI+ G   T+ L ++ ++F+ G +  G LG+   T + V   R
Sbjct: 183 IRHSPAEVELFVSVPIIQISAGNLFTMALTASGTLFAWGRNEEGQLGNF--TNRDVINPR 240

Query: 157 INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNS--SFCCGHRDTNRPIFRPRLVEALK 214
              P+   VV V   ++H+  +   G+VF+CG +S     CG    ++   R   +  + 
Sbjct: 241 -EVPNINSVVVVECGDSHSIALTHEGRVFSCGSDSFGQLGCGQPSRSQNCMRG--ITEML 297

Query: 215 GVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSV 271
           G    ++  G   T  +   G +HT G N++GQLGHG+T ++ TP+ I  +E V SV
Sbjct: 298 GSHVTRIACGRCHT-IVVANGKMHTFGLNSNGQLGHGNTRNQITPRMIDSVENVASV 353


>gi|383453805|ref|YP_005367794.1| hypothetical protein COCOR_01791, partial [Corallococcus
           coralloides DSM 2259]
 gi|380728287|gb|AFE04289.1| hypothetical protein COCOR_01791 [Corallococcus coralloides DSM
           2259]
          Length = 827

 Score =  119 bits (299), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 107/363 (29%), Positives = 166/363 (45%), Gaps = 22/363 (6%)

Query: 116 ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           +  G+ H+L L+++ +V++ G +    LG G E     S T +  P  A V  ++A EN 
Sbjct: 482 VAAGKTHSLALLADGTVWAWGDNSFSALGLGDE--PGASPTPVQVPKLAGVRSLAAGENS 539

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFR-PRLVEALKGVPCKQVTAGLNFTGFLTI 233
           +  VL +G V   G       G    +  IF+ P  +  L G+    V  G  ++  L  
Sbjct: 540 SLAVLANGTVMAWGYGLFGQLGSESAS--IFQIPEPIFGLSGITA--VAMGHWYSLALRE 595

Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
            G V + G N  GQLG G T +RP P  +A L +V     IAAG S+ LA+  +G V+++
Sbjct: 596 DGTVWSWGYNASGQLGDGTTDERPRPGQVAGLTQV---TAIAAGASHALALRADGTVWAW 652

Query: 294 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 353
           GS +   LG G Q     P  +Q        V+ V+AG+ H +AL   G V++WG    G
Sbjct: 653 GSNALGTLGDGTQTSRSTPVQVQGL----TGVIAVAAGEYHSLALREDGTVWSWGNNNEG 708

Query: 354 ALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRG 413
            LG      +  P  +  L      ++ A ++     V+ G +  FG    G LG  +R 
Sbjct: 709 QLGDVTASSRQSPGQVPGLAG--VQRIAAGEKHALAAVEGGPLVAFGKNTSGQLGLGER- 765

Query: 414 VSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEP 473
             +   R  I  SLR  +   I+ G+ HT+ V   G ++ +G N   QLG+       +P
Sbjct: 766 -KENQSRGEIA-SLR--NPRGIAAGIAHTLAVAADGTVWAWGANATGQLGNGEAANSPQP 821

Query: 474 TEI 476
             +
Sbjct: 822 ITV 824



 Score = 99.0 bits (245), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 96/365 (26%), Positives = 153/365 (41%), Gaps = 19/365 (5%)

Query: 100 VEHSSDIVETSAGNMQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRIN 158
           + H+   V    G   ++ G  H + ++S+ S    G +    LG  PE+        + 
Sbjct: 415 IRHTPTPVPGLTGVTAVSAGEDHVVAVLSDGSPRVWGDNQFMQLGRPPESVN--RGGPVQ 472

Query: 159 FPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPC 218
            P       V+A + H+  +L  G V+  GDNS    G  D   P   P  V+  K    
Sbjct: 473 VPGLTEASLVAAGKTHSLALLADGTVWAWGDNSFSALGLGD--EPGASPTPVQVPKLAGV 530

Query: 219 KQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGP 278
           + + AG N +  +   G V   G    GQLG         P+   P+  +  +  +A G 
Sbjct: 531 RSLAAGENSSLAVLANGTVMAWGYGLFGQLGSESASIFQIPE---PIFGLSGITAVAMGH 587

Query: 279 SYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
            Y LA+  +G V+S+G  ++  LG G   +  +P  +         V  ++AG  H +AL
Sbjct: 588 WYSLALREDGTVWSWGYNASGQLGDGTTDERPRPGQVAGL----TQVTAIAAGASHALAL 643

Query: 339 DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYG 398
            + G V+ WG    G LG G +  ++ P  +  L   +A  V A +  +  L + G+V+ 
Sbjct: 644 RADGTVWAWGSNALGTLGDGTQTSRSTPVQVQGLTGVIA--VAAGEYHSLALREDGTVWS 701

Query: 399 FGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNE 458
           +G    G LG  D   S +   P  +  L    V +I+ G  H +   + G L  FG N 
Sbjct: 702 WGNNNEGQLG--DVTASSR-QSPGQVPGLAG--VQRIAAGEKHALAAVEGGPLVAFGKNT 756

Query: 459 RAQLG 463
             QLG
Sbjct: 757 SGQLG 761



 Score = 98.2 bits (243), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 109/378 (28%), Positives = 153/378 (40%), Gaps = 35/378 (9%)

Query: 104 SDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAA 163
           +D+   S G      G Y   L+ + +V S G++  G LG G      +  T    P   
Sbjct: 377 TDVATVSVG------GYYAVALMGDGTVRSWGNNDSGQLGDG----TYIRHTPTPVPGLT 426

Query: 164 HVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGH--RDTNR--PIFRPRLVEALKGVPCK 219
            V  VSA E+H   VL  G     GDN     G      NR  P+  P L EA       
Sbjct: 427 GVTAVSAGEDHVVAVLSDGSPRVWGDNQFMQLGRPPESVNRGGPVQVPGLTEA------S 480

Query: 220 QVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLD-RPTPKSIAPLEEVGSVVQIAAGP 278
            V AG   +  L   G V   G N+   LG GD     PTP  +  L  V S   +AAG 
Sbjct: 481 LVAAGKTHSLALLADGTVWAWGDNSFSALGLGDEPGASPTPVQVPKLAGVRS---LAAGE 537

Query: 279 SYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
           +  LAV  NG V ++G G    LG         P  I  F   GI  V +  G  + +AL
Sbjct: 538 NSSLAVLANGTVMAWGYGLFGQLGSESASIFQIPEPI--FGLSGITAVAM--GHWYSLAL 593

Query: 339 DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYG 398
              G V++WG    G LG G   ++  P  ++ L    A+   A       L   G+V+ 
Sbjct: 594 REDGTVWSWGYNASGQLGDGTTDERPRPGQVAGLTQVTAI--AAGASHALALRADGTVWA 651

Query: 399 FGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNE 458
           +G    G+LG    G       P  +  L    V  ++ G YH++ + + G ++ +G+N 
Sbjct: 652 WGSNALGTLG---DGTQTSRSTPVQVQGLTG--VIAVAAGEYHSLALREDGTVWSWGNNN 706

Query: 459 RAQLGHDTLRGCLEPTEI 476
             QLG  T      P ++
Sbjct: 707 EGQLGDVTASSRQSPGQV 724



 Score = 95.1 bits (235), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 107/393 (27%), Positives = 171/393 (43%), Gaps = 32/393 (8%)

Query: 94  LRF---LQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQ 150
           LRF   ++ V   +D+   SAGN       +   L ++ +V++ GS+  G LG G +T++
Sbjct: 162 LRFDGGVRPVPGLTDVRAVSAGN------EHALALRTDGTVWAWGSNFAGQLGDGTKTSR 215

Query: 151 CVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLV 210
                 +       V+ VSA+   +  + + G V+  GDN S   G   T      P  V
Sbjct: 216 STPVQVVGL---TEVIAVSAAGYSSLALRKDGTVWAWGDNESGQLGD-GTMEGRLTP--V 269

Query: 211 EALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS 270
           + L  V    + AG   +  +   G V   G+N +GQLG G       P+ +A + ++  
Sbjct: 270 QVLDLVRVTGLAAGRGHSLAVLADGTVRAWGANIYGQLGDGGFSLEGNPRPVA-VSKLTD 328

Query: 271 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 330
           VV +AA  S   AV  +G V S+GS  +  LG  ++ +   P  +         V  VS 
Sbjct: 329 VVSVAASTSLSFAVHSDGTVSSWGSNVDGALGVEQRSNSRVPSKVFGL----TDVATVSV 384

Query: 331 GDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVL 390
           G  + VAL   G V +WG    G LG G  I  T P P+  L    A  V A +     +
Sbjct: 385 GGYYAVALMGDGTVRSWGNNDSGQLGDGTYIRHT-PTPVPGLTGVTA--VSAGEDHVVAV 441

Query: 391 VDTGSVYGFGWMGFGSLGFPDRGVS--DKVLRPRILDSLRAHHVSQISTGLYHTVVVTDR 448
           +  GS   +G   F  LG P   V+    V  P + ++      S ++ G  H++ +   
Sbjct: 442 LSDGSPRVWGDNQFMQLGRPPESVNRGGPVQVPGLTEA------SLVAAGKTHSLALLAD 495

Query: 449 GRLFGFGDNERAQLGHDTLRGCLEPTEIFIQEM 481
           G ++ +GDN  + LG     G   PT + + ++
Sbjct: 496 GTVWAWGDNSFSALGLGDEPGA-SPTPVQVPKL 527



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 91/337 (27%), Positives = 145/337 (43%), Gaps = 36/337 (10%)

Query: 47  GLYPQKFRSLVDLAASQLCALHSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDI 106
           GL  +   S   +   +L  + S+ AG + ++ + L N     W   L F Q    S+ I
Sbjct: 510 GLGDEPGASPTPVQVPKLAGVRSLAAGENSSLAV-LANGTVMAWGYGL-FGQLGSESASI 567

Query: 107 VETS------AGNMQITTGRYHTL-LISNSSVFSCGSSLCGVLGHG-----PETTQCVSF 154
            +        +G   +  G +++L L  + +V+S G +  G LG G     P   Q    
Sbjct: 568 FQIPEPIFGLSGITAVAMGHWYSLALREDGTVWSWGYNASGQLGDGTTDERPRPGQVAGL 627

Query: 155 TRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALK 214
           T+        V  ++A  +HA  +   G V+  G N+    G   T      P  V+ L 
Sbjct: 628 TQ--------VTAIAAGASHALALRADGTVWAWGSNALGTLGD-GTQTSRSTPVQVQGLT 678

Query: 215 GVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQI 274
           GV    V AG   +  L   G V + G+N  GQLG      R +P  +  L     V +I
Sbjct: 679 GVIA--VAAGEYHSLALREDGTVWSWGNNNEGQLGDVTASSRQSPGQVPGLA---GVQRI 733

Query: 275 AAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRR-KGIHVVRVSAGDE 333
           AAG  + LA    G + +FG  ++  LG GE+ +      I + R  +GI     +AG  
Sbjct: 734 AAGEKHALAAVEGGPLVAFGKNTSGQLGLGERKENQSRGEIASLRNPRGI-----AAGIA 788

Query: 334 HVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLS 370
           H +A+ + G V+ WG    G LG+G+  +   P+P++
Sbjct: 789 HTLAVAADGTVWAWGANATGQLGNGEAANS--PQPIT 823



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 60/202 (29%), Positives = 99/202 (49%), Gaps = 10/202 (4%)

Query: 116 ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           I  G  H L L ++ +V++ GS+  G LG G +T++    T +       V+ V+A E H
Sbjct: 633 IAAGASHALALRADGTVWAWGSNALGTLGDGTQTSRS---TPVQVQGLTGVIAVAAGEYH 689

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 234
           +  + + G V++ G+N+    G   T      P  V  L GV  +++ AG          
Sbjct: 690 SLALREDGTVWSWGNNNEGQLGDV-TASSRQSPGQVPGLAGV--QRIAAGEKHALAAVEG 746

Query: 235 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 294
           G +   G NT GQLG G+  +  +   IA L    +   IAAG ++ LAV  +G V+++G
Sbjct: 747 GPLVAFGKNTSGQLGLGERKENQSRGEIASLR---NPRGIAAGIAHTLAVAADGTVWAWG 803

Query: 295 SGSNFCLGHGEQHDELQPRAIQ 316
           + +   LG+GE  +  QP  ++
Sbjct: 804 ANATGQLGNGEAANSPQPITVK 825



 Score = 69.7 bits (169), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 98/361 (27%), Positives = 136/361 (37%), Gaps = 42/361 (11%)

Query: 112 GNMQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRIN-----FPSAAHV 165
           G   +  GRYH+L++  + +V   G                +S+ R +      P    V
Sbjct: 134 GAPAVAAGRYHSLMVRPDGTVLEWG----------------LSYLRFDGGVRPVPGLTDV 177

Query: 166 VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 225
             VSA   HA  +   G V+  G N     G         R   V+ +       V+A  
Sbjct: 178 RAVSAGNEHALALRTDGTVWAWGSN---FAGQLGDGTKTSRSTPVQVVGLTEVIAVSAAG 234

Query: 226 NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 285
             +  L   G V   G N  GQLG G    R TP  +  L     V  +AAG  + LAV 
Sbjct: 235 YSSLALRKDGTVWAWGDNESGQLGDGTMEGRLTPVQVLDLVR---VTGLAAGRGHSLAVL 291

Query: 286 GNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVY 345
            +G V ++G+     LG G    E  PR +     K   VV V+A      A+ S G V 
Sbjct: 292 ADGTVRAWGANIYGQLGDGGFSLEGNPRPVAV--SKLTDVVSVAASTSLSFAVHSDGTVS 349

Query: 346 TWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFG 405
           +WG    GALG     +  +P  +  L     V V         L+  G+V  +G    G
Sbjct: 350 SWGSNVDGALGVEQRSNSRVPSKVFGLTDVATVSVGG--YYAVALMGDGTVRSWGNNDSG 407

Query: 406 SLGFPDRGVSDKVLR--PRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 463
            LG          +R  P  +  L    V+ +S G  H V V   G    +GDN+  QLG
Sbjct: 408 QLG------DGTYIRHTPTPVPGLTG--VTAVSAGEDHVVAVLSDGSPRVWGDNQFMQLG 459

Query: 464 H 464
            
Sbjct: 460 R 460



 Score = 43.5 bits (101), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 43/161 (26%), Positives = 65/161 (40%), Gaps = 17/161 (10%)

Query: 328 VSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKT 387
           V+AG  H + +   G V  WG  Y          D  +  P+  L    AV   A     
Sbjct: 138 VAAGRYHSLMVRPDGTVLEWGLSYL-------RFDGGV-RPVPGLTDVRAV--SAGNEHA 187

Query: 388 FVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTD 447
             L   G+V+ +G    G LG        K  R   +  +    V  +S   Y ++ +  
Sbjct: 188 LALRTDGTVWAWGSNFAGQLGD-----GTKTSRSTPVQVVGLTEVIAVSAAGYSSLALRK 242

Query: 448 RGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQEMEEDTGLA 488
            G ++ +GDNE  QLG  T+ G L P ++   ++   TGLA
Sbjct: 243 DGTVWAWGDNESGQLGDGTMEGRLTPVQVL--DLVRVTGLA 281


>gi|444919546|ref|ZP_21239558.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
 gi|444708349|gb|ELW49424.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
          Length = 494

 Score =  119 bits (299), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 109/363 (30%), Positives = 164/363 (45%), Gaps = 20/363 (5%)

Query: 116 ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           +  G  H+L L S+ +V++ G++  G LG G  T   V    +     + VV V A  +H
Sbjct: 1   MAAGSSHSLALRSDGTVWAWGANSSGQLGDGTTTYSPVPVP-VQVQGLSEVVAVDAGSSH 59

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 234
           +  V   G V+  G N+S   G   T   I R   V+ L       V AG +    L   
Sbjct: 60  SLAVRSDGTVWAWGSNASGQLGDETT---ISRSTPVQVLGLSGVLFVAAGSSHVLALRYD 116

Query: 235 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 294
           G V   GSN+ GQ G G T +R  P     L     V+ +AAG ++ LAV  +G  +++G
Sbjct: 117 GTVWAWGSNSSGQRGDGTTNNRALPVQAQGLS---GVMAVAAGDNHSLAVRSDGSAWAWG 173

Query: 295 SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGA 354
           S ++  LG G   +  +P  +Q        VV V+AG  H +A+ S G V+ WG    G 
Sbjct: 174 SNASGQLGEGTTSNRPEPVQVQGLS----GVVAVAAGSAHSLAVRSDGTVWAWGANASGQ 229

Query: 355 LGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGV 414
           LG G   D+ +P  +  L     V V A    +  + + G+V+G+G      LG   +G 
Sbjct: 230 LGDGTTTDRLVPVQVQGLSG--VVAVAAGHHHSLAVRNDGTVWGWGRNDSNQLG---KG- 283

Query: 415 SDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPT 474
           S ++L P  +  L A  V  ++ G  H++ V   G ++  G N   QLG  T    L P 
Sbjct: 284 SMRLLVPAQVQGLSA--VVAVAAGDTHSLAVGSDGTVWAVGSNNNGQLGDGTTTYRLVPV 341

Query: 475 EIF 477
            + 
Sbjct: 342 PVL 344



 Score =  118 bits (295), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 108/364 (29%), Positives = 165/364 (45%), Gaps = 24/364 (6%)

Query: 114 MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           + +  G  H+L + S+ +V++ GS+  G LG   ETT   S T +     + V+ V+A  
Sbjct: 51  VAVDAGSSHSLAVRSDGTVWAWGSNASGQLGD--ETTISRS-TPVQVLGLSGVLFVAAGS 107

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
           +H   +   G V+  G NSS   G   TN     P   + L GV    V AG N +  + 
Sbjct: 108 SHVLALRYDGTVWAWGSNSSGQRGDGTTNNRAL-PVQAQGLSGVMA--VAAGDNHSLAVR 164

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
             G     GSN  GQLG G T +RP P  +  L     VV +AAG ++ LAV  +G V++
Sbjct: 165 SDGSAWAWGSNASGQLGEGTTSNRPEPVQVQGLS---GVVAVAAGSAHSLAVRSDGTVWA 221

Query: 293 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 352
           +G+ ++  LG G   D L P  +Q        VV V+AG  H +A+ + G V+ WG+   
Sbjct: 222 WGANASGQLGDGTTTDRLVPVQVQGLS----GVVAVAAGHHHSLAVRNDGTVWGWGRNDS 277

Query: 353 GALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDR 412
             LG G  +   +P  +  L +   V V A    +  +   G+V+  G    G LG    
Sbjct: 278 NQLGKG-SMRLLVPAQVQGLSA--VVAVAAGDTHSLAVGSDGTVWAVGSNNNGQLG---- 330

Query: 413 GVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLE 472
              D     R++       V  ++   YH++ V   G ++ +G N   QLG  T    L 
Sbjct: 331 ---DGTTTYRLVPVPVLSGVVSVAANDYHSLAVRSDGTVWAWGYNSTGQLGDGTTTTRLV 387

Query: 473 PTEI 476
           P ++
Sbjct: 388 PVQV 391



 Score =  102 bits (255), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 105/360 (29%), Positives = 161/360 (44%), Gaps = 34/360 (9%)

Query: 111 AGNMQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHG-----PETTQCVSFTRINFPSAAH 164
           +G M +  G  H+L + S+ S ++ GS+  G LG G     PE  Q    +         
Sbjct: 148 SGVMAVAAGDNHSLAVRSDGSAWAWGSNASGQLGEGTTSNRPEPVQVQGLS--------G 199

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           VV V+A   H+  V   G V+  G N+S   G   T   +  P  V+ L GV    V AG
Sbjct: 200 VVAVAAGSAHSLAVRSDGTVWAWGANASGQLGDGTTTDRLV-PVQVQGLSGVVA--VAAG 256

Query: 225 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 284
            + +  +   G V   G N   QLG G ++    P  +  L    +VV +AAG ++ LAV
Sbjct: 257 HHHSLAVRNDGTVWGWGRNDSNQLGKG-SMRLLVPAQVQGLS---AVVAVAAGDTHSLAV 312

Query: 285 TGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
             +G V++ GS +N  LG G     L P  + +       VV V+A D H +A+ S G V
Sbjct: 313 GSDGTVWAVGSNNNGQLGDGTTTYRLVPVPVLS------GVVSVAANDYHSLAVRSDGTV 366

Query: 345 YTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGF 404
           + WG    G LG G    + +P  +S L     V V A    +  +   GS + +G   +
Sbjct: 367 WAWGYNSTGQLGDGTTTTRLVPVQVSGLSE--VVSVVAGGYHSLAVRSDGSAWDWGSNAY 424

Query: 405 GSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 464
           G LG    G +  +  P  +  L    V  +++G  H++ +   G ++ +G N   QLG+
Sbjct: 425 GQLG---DGSTTYLPVPVRVQQLSG--VGAVASGSSHSLALRSDGTVWTWGYNSFGQLGN 479



 Score = 79.3 bits (194), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 82/265 (30%), Positives = 118/265 (44%), Gaps = 33/265 (12%)

Query: 107 VETSAGNMQITTGRYHTLLISNS-SVFSCGSSLCGVLGHG------PETTQCVSFTRINF 159
           V+  +G + +  G +H+L + N  +V+  G +    LG G      P   Q +S      
Sbjct: 244 VQGLSGVVAVAAGHHHSLAVRNDGTVWGWGRNDSNQLGKGSMRLLVPAQVQGLSA----- 298

Query: 160 PSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCK 219
                VV V+A + H+  V   G V+  G N++   G   T    +R   V  L GV   
Sbjct: 299 -----VVAVAAGDTHSLAVGSDGTVWAVGSNNNGQLGDGTTT---YRLVPVPVLSGV--- 347

Query: 220 QVTAGLNFTGFLTIR--GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAG 277
            V+   N    L +R  G V   G N+ GQLG G T  R  P  ++ L EV SVV   AG
Sbjct: 348 -VSVAANDYHSLAVRSDGTVWAWGYNSTGQLGDGTTTTRLVPVQVSGLSEVVSVV---AG 403

Query: 278 PSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
             + LAV  +G  + +GS +   LG G       P  +Q     G     V++G  H +A
Sbjct: 404 GYHSLAVRSDGSAWDWGSNAYGQLGDGSTTYLPVPVRVQQLSGVGA----VASGSSHSLA 459

Query: 338 LDSSGYVYTWGKGYCGALGHGDEID 362
           L S G V+TWG    G LG+G  ++
Sbjct: 460 LRSDGTVWTWGYNSFGQLGNGPPLN 484



 Score = 49.3 bits (116), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 46/150 (30%), Positives = 70/150 (46%), Gaps = 9/150 (6%)

Query: 111 AGNMQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS 169
           +G + +    YH+L + S+ +V++ G +  G LG G  TT+ V    +     + VV V 
Sbjct: 345 SGVVSVAANDYHSLAVRSDGTVWAWGYNSTGQLGDGTTTTRLVP---VQVSGLSEVVSVV 401

Query: 170 ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNR-PIFRPRLVEALKGVPCKQVTAGLNFT 228
           A   H+  V   G  +  G N+    G   T   P+  P  V+ L GV    V +G + +
Sbjct: 402 AGGYHSLAVRSDGSAWDWGSNAYGQLGDGSTTYLPV--PVRVQQLSGVGA--VASGSSHS 457

Query: 229 GFLTIRGHVHTCGSNTHGQLGHGDTLDRPT 258
             L   G V T G N+ GQLG+G  L+  T
Sbjct: 458 LALRSDGTVWTWGYNSFGQLGNGPPLNTAT 487


>gi|444730943|gb|ELW71312.1| putative E3 ubiquitin-protein ligase HERC1 [Tupaia chinensis]
          Length = 4409

 Score =  119 bits (299), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 99/337 (29%), Positives = 161/337 (47%), Gaps = 24/337 (7%)

Query: 115  QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQV---SA 170
            Q+  G+  T +I +N +V +CG    G LG G      V  T I+      V Q+     
Sbjct: 3569 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHV-LTVISALQGFVVTQLVTSCG 3627

Query: 171  SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
            S+ H+  + +SG+VF+ GD      GH +++R   RPR +EAL+G    Q++ G   +  
Sbjct: 3628 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQMSCGFKHSAV 3686

Query: 231  LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG-V 289
            +T  G + T G+  +G+LG G+T ++  P+            ++A G ++ LAV+ +G +
Sbjct: 3687 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPE------------RVACGLNHTLAVSADGSM 3734

Query: 290  VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 349
            V++FG G    LG G    +  P+ +      GI + +V+ G +  VAL   G+VYT+G+
Sbjct: 3735 VWAFGDGDYGKLGLGNSTAKSSPQKVDVL--CGIGIKKVACGTQFSVALTKDGHVYTFGQ 3792

Query: 350  GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGF 409
                 L  G   +   P+ +  L   +   V      T  L  TG VY +G    G LG 
Sbjct: 3793 DRLIGLPEGRARNHNRPQQVPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGL 3852

Query: 410  PDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT 446
               G ++ V  P ++  L+  +V QIS G  H+   T
Sbjct: 3853 ---GHTNHVREPTLVTVLQGKNVRQISAGRCHSAAWT 3886



 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 91/315 (28%), Positives = 144/315 (45%), Gaps = 25/315 (7%)

Query: 160 PSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTN------RPIFRPRLVEAL 213
           PS +    + A +     +   G V  CG  S    G  D+N      +  F P    ++
Sbjct: 398 PSFSDAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPH--RSI 455

Query: 214 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
           K V   + + G   T   T  G V + G   +G+LGHG++  +  PK I    +   VV 
Sbjct: 456 KKVSSSKGSDG--HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVC 513

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           ++AG  +  AVT +G +Y++G G    LGHG+ +     R I T  +   +V  VS G  
Sbjct: 514 VSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNS----RNIPTLVKDISNVGEVSCGSS 569

Query: 334 HVVALDSSGY-VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVD 392
           H +AL   G  V+++G G  G LGHGD      P+ + +L+     +VCA  + +  L  
Sbjct: 570 HTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTS 629

Query: 393 TGSVYGFG---WMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRG 449
           TG VY +G    +G GS            LRP++++ L A  +  IS G  H + ++   
Sbjct: 630 TGQVYAWGCGACLGCGS-------SEATALRPKLIEELAATRIVDISIGDSHCLALSHDN 682

Query: 450 RLFGFGDNERAQLGH 464
            ++ +G+N   Q G 
Sbjct: 683 EVYAWGNNSMGQCGQ 697



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 92/267 (34%), Positives = 130/267 (48%), Gaps = 16/267 (5%)

Query: 122 HTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ-VSASENHAAFVL 179
           HTL   +   VFS G    G LGHG  +TQ      I  P    VV  VSA   H+A V 
Sbjct: 467 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYP-KLIQGPLQGKVVVCVSAGYRHSAAVT 525

Query: 180 QSGQVFTCGDNSSFCCGHRDTN-RPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH-V 237
           + G+++T G+      GH D+N R I  P LV+ +  V   +V+ G + T  L+  G  V
Sbjct: 526 EDGELYTWGEGDFGRLGHGDSNSRNI--PTLVKDISNV--GEVSCGSSHTIALSKDGRTV 581

Query: 238 HTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 297
            + G   +G+LGHGDT     PK I  L+ +  + ++ AG    LA+T  G VY++G G+
Sbjct: 582 WSFGGGDNGKLGHGDTNRVYKPKVIEALQGM-FIRKVCAGSQSSLALTSTGQVYAWGCGA 640

Query: 298 NFCLGHG-EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 356
             CLG G  +   L+P+ I+        +V +S GD H +AL     VY WG    G  G
Sbjct: 641 --CLGCGSSEATALRPKLIEEL--AATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCG 696

Query: 357 HGDEIDK-TLPEPLSSLKSHLAVQVCA 382
            G+     T P+ +S L      Q+ A
Sbjct: 697 QGNSTGPITKPKKVSGLDGIAIQQISA 723



 Score = 91.3 bits (225), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 87/324 (26%), Positives = 146/324 (45%), Gaps = 24/324 (7%)

Query: 160  PSAAHVVQVSASENHAAFVLQS-GQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPC 218
            PS +   QV   +N   FV+Q+ G V  CG+ S    G  +++  +    ++ AL+G   
Sbjct: 3562 PSFSQAQQVICGQN-CTFVIQANGTVLACGEGSYGRLGQGNSDD-LHVLTVISALQGFVV 3619

Query: 219  KQVTAGLNFTGF---LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA 275
             Q+       G    LT  G V + G   +G+LGHG++  +  P+ I  L+    VVQ++
Sbjct: 3620 TQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQG-EEVVQMS 3678

Query: 276  AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHV 335
             G  +   VT +G +++FG+G    LG G   ++  P              RV+ G  H 
Sbjct: 3679 CGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPE-------------RVACGLNHT 3725

Query: 336  VALDSSG-YVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 394
            +A+ + G  V+ +G G  G LG G+   K+ P+ +  L      +V    + +  L   G
Sbjct: 3726 LAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDG 3785

Query: 395  SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 454
             VY FG      +G P+ G +    RP+ +  L    +  ++ G  HT+ +   G ++ +
Sbjct: 3786 HVYTFGQDRL--IGLPE-GRARNHNRPQQVPVLAGVVIEDVAVGAEHTLALASTGDVYAW 3842

Query: 455  GDNERAQLGHDTLRGCLEPTEIFI 478
            G N   QLG        EPT + +
Sbjct: 3843 GSNSEGQLGLGHTNHVREPTLVTV 3866



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 66/230 (28%), Positives = 102/230 (44%), Gaps = 22/230 (9%)

Query: 237  VHTCGSNTHGQLGH-GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 295
            V+  G+  HGQL   G  +  P   + AP        Q+  G +    +  NG V + G 
Sbjct: 3537 VYLWGAGRHGQLAEAGRNVMVP---AAAP--SFSQAQQVICGQNCTFVIQANGTVLACGE 3591

Query: 296  GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG-DEHVVALDSSGYVYTWGKGYCGA 354
            GS   LG G   D      I   +   +  +  S G D H +AL  SG V++WG G  G 
Sbjct: 3592 GSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGK 3651

Query: 355  LGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGV 414
            LGHG+   +  P  + +L+    VQ+    + + V+   G ++ FG   +G LG  +   
Sbjct: 3652 LGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN--T 3709

Query: 415  SDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRL-FGFGDNERAQLG 463
            S+K L  R            ++ GL HT+ V+  G + + FGD +  +LG
Sbjct: 3710 SNKKLPER------------VACGLNHTLAVSADGSMVWAFGDGDYGKLG 3747



 Score = 59.7 bits (143), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 49/180 (27%), Positives = 82/180 (45%), Gaps = 13/180 (7%)

Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 349
           VY +GS S+  L  G Q   LQP+   +F         + AG      + + G V   GK
Sbjct: 372 VYVWGSNSSHQLVEGTQEKILQPKLAPSFS----DAQTIEAGQYCTFVISTDGSVRACGK 427

Query: 350 GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKR----KTFVLVDTGSVYGFGWMGFG 405
           G  G LG GD  +++  + L + + H +++  +  +     T      G V+ +G   +G
Sbjct: 428 GSYGRLGLGDSNNQSTLKKL-TFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYG 486

Query: 406 SLGFPDRGVSDKVLRPRILD-SLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 464
            LG    G S     P+++   L+   V  +S G  H+  VT+ G L+ +G+ +  +LGH
Sbjct: 487 KLG---HGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGH 543



 Score = 49.3 bits (116), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 41/143 (28%), Positives = 67/143 (46%), Gaps = 9/143 (6%)

Query: 344  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 403
            VY WG G  G L    E  + +  P ++     A QV   +  TFV+   G+V   G   
Sbjct: 3537 VYLWGAGRHGQLA---EAGRNVMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGS 3593

Query: 404  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLY---HTVVVTDRGRLFGFGDNERA 460
            +G LG   +G SD +    ++ +L+   V+Q+ T      H++ +T+ G +F +GD +  
Sbjct: 3594 YGRLG---QGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYG 3650

Query: 461  QLGHDTLRGCLEPTEIFIQEMEE 483
            +LGH        P +I   + EE
Sbjct: 3651 KLGHGNSDRQRRPRQIEALQGEE 3673



 Score = 48.9 bits (115), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 28/100 (28%), Positives = 48/100 (48%), Gaps = 2/100 (2%)

Query: 125 LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQV 184
           L S   V++ G   C  LG G      +    I   +A  +V +S  ++H   +    +V
Sbjct: 627 LTSTGQVYAWGCGAC--LGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEV 684

Query: 185 FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           +  G+NS   CG  ++  PI +P+ V  L G+  +Q++AG
Sbjct: 685 YAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAG 724


>gi|348666178|gb|EGZ06006.1| hypothetical protein PHYSODRAFT_533148 [Phytophthora sojae]
          Length = 429

 Score =  119 bits (299), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 88/297 (29%), Positives = 142/297 (47%), Gaps = 20/297 (6%)

Query: 176 AFVLQSGQVFTCGDNSSFCCGHRDTNRPIFR-------PRLVEALKGVPCKQVTAGLNFT 228
           AF  QS  V+T G+ +    GH    +   R       P+L+EA +G     V  G + +
Sbjct: 37  AFSTQS-SVYTWGNGTLGQLGHGPVVKSGIRNAYEELTPKLLEAFEGKAITHVEFGASHS 95

Query: 229 GFLTIRGHVHTCGSNTHGQLGHGDTLDRPT-PKSIAPLEEVGSVVQIAAGPSYMLAVTGN 287
             +   G ++  GSN + +LG G++ +  T P+ +  L+ V  +V ++ G  +  AV  +
Sbjct: 96  AAIDEDGKLYVWGSNEYSKLGLGESSEMETLPREVEALKGV-KIVDVSCGDYFTAAVDAD 154

Query: 288 GVVYSFGSGSN-----FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
           G +YS+G G +       LGH    DE  PR + T   +G+ ++ V  G+ H VAL   G
Sbjct: 155 GKMYSWGWGGSTMKGAGGLGHAGGKDEPTPRLLTTLVDQGVPILTVECGEFHTVALSKDG 214

Query: 343 YVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWM 402
            ++ WG G  G LG+G+     +PEP+        V + A +  +F L D G +Y +G  
Sbjct: 215 EIWAWGNGEYGRLGNGESDTCEVPEPIEFFSKDNVVSIAAGRDFSFALTDNGELYSWGGN 274

Query: 403 GFGSLGFPDRGVSDKVLR----PRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFG 455
               LG    G++  V      P ++++     V QI+ G  H   VTD GRL+ +G
Sbjct: 275 SQNQLGIGG-GLAMDVYNIESIPVLVEAFNGLSVKQIAAGYDHAAAVTDDGRLYMWG 330



 Score =  108 bits (269), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 92/370 (24%), Positives = 168/370 (45%), Gaps = 37/370 (10%)

Query: 127 SNSSVFSCGSSLCGVLGHGPETTQCV--SFTRIN------FPSAAHVVQVSASENHAAFV 178
           + SSV++ G+   G LGHGP     +  ++  +       F   A +  V    +H+A +
Sbjct: 40  TQSSVYTWGNGTLGQLGHGPVVKSGIRNAYEELTPKLLEAFEGKA-ITHVEFGASHSAAI 98

Query: 179 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVH 238
            + G+++  G N     G  +++     PR VEALKGV    V+ G  FT  +   G ++
Sbjct: 99  DEDGKLYVWGSNEYSKLGLGESSEMETLPREVEALKGVKIVDVSCGDYFTAAVDADGKMY 158

Query: 239 TCG-----SNTHGQLGHGDTLDRPTPKSIAPLEEVG-SVVQIAAGPSYMLAVTGNGVVYS 292
           + G         G LGH    D PTP+ +  L + G  ++ +  G  + +A++ +G +++
Sbjct: 159 SWGWGGSTMKGAGGLGHAGGKDEPTPRLLTTLVDQGVPILTVECGEFHTVALSKDGEIWA 218

Query: 293 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 352
           +G+G    LG+GE      P  I+ F +   +VV ++AG +   AL  +G +Y+WG    
Sbjct: 219 WGNGEYGRLGNGESDTCEVPEPIEFFSKD--NVVSIAAGRDFSFALTDNGELYSWGGNSQ 276

Query: 353 GALGHGDEID------KTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGS 406
             LG G  +       +++P  + +       Q+ A       + D G +Y +G      
Sbjct: 277 NQLGIGGGLAMDVYNIESIPVLVEAFNGLSVKQIAAGYDHAAAVTDDGRLYMWG------ 330

Query: 407 LGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDT 466
                   S   + P  + ++  + + Q++ G  +TV +++ G +F FG      LGH  
Sbjct: 331 --------SKIWIEPHEMTAVNEYKMVQVACGRQYTVALSENGEVFTFGKGSSNCLGHGD 382

Query: 467 LRGCLEPTEI 476
            +  L+P +I
Sbjct: 383 RKNQLQPVQI 392



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 66/231 (28%), Positives = 117/231 (50%), Gaps = 21/231 (9%)

Query: 114 MQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           + +  G +HT+ +S +  +++ G+   G LG+G E+  C     I F S  +VV ++A  
Sbjct: 198 LTVECGEFHTVALSKDGEIWAWGNGEYGRLGNG-ESDTCEVPEPIEFFSKDNVVSIAAGR 256

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCG-----HRDTNRPIFRPRLVEALKGVPCKQVTAGLNF 227
           + +  +  +G++++ G NS    G       D       P LVEA  G+  KQ+ AG + 
Sbjct: 257 DFSFALTDNGELYSWGGNSQNQLGIGGGLAMDVYNIESIPVLVEAFNGLSVKQIAAGYDH 316

Query: 228 TGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN 287
              +T  G ++  GS    +           P  +  + E   +VQ+A G  Y +A++ N
Sbjct: 317 AAAVTDDGRLYMWGSKIWIE-----------PHEMTAVNEY-KMVQVACGRQYTVALSEN 364

Query: 288 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
           G V++FG GS+ CLGHG++ ++LQP  I+      +++  +S GD H+ A+
Sbjct: 365 GEVFTFGKGSSNCLGHGDRKNQLQPVQIEALAD--VNITSISCGDYHMGAI 413



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 94/341 (27%), Positives = 152/341 (44%), Gaps = 40/341 (11%)

Query: 119 GRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSASENHAA 176
           G  H+  I  +  ++  GS+    LG G E+++  +  R +       +V VS  +   A
Sbjct: 91  GASHSAAIDEDGKLYVWGSNEYSKLGLG-ESSEMETLPREVEALKGVKIVDVSCGDYFTA 149

Query: 177 FVLQSGQVFTCGDNSSFCCGHRDTNRPIFR----PRLVEAL--KGVPCKQVTAGLNFTGF 230
            V   G++++ G   S   G         +    PRL+  L  +GVP   V  G   T  
Sbjct: 150 AVDADGKMYSWGWGGSTMKGAGGLGHAGGKDEPTPRLLTTLVDQGVPILTVECGEFHTVA 209

Query: 231 LTIRGHVHTCGSNTHGQLGHG--DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG 288
           L+  G +   G+  +G+LG+G  DT + P P      +   +VV IAAG  +  A+T NG
Sbjct: 210 LSKDGEIWAWGNGEYGRLGNGESDTCEVPEPIEFFSKD---NVVSIAAGRDFSFALTDNG 266

Query: 289 VVYSFGSGSNFCLGHGE------QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
            +YS+G  S   LG G        + E  P  ++ F   G+ V +++AG +H  A+   G
Sbjct: 267 ELYSWGGNSQNQLGIGGGLAMDVYNIESIPVLVEAFN--GLSVKQIAAGYDHAAAVTDDG 324

Query: 343 YVYTWGKGYCGALGHGDEIDKTLPEP--LSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 400
            +Y WG              K   EP  ++++  +  VQV   ++ T  L + G V+ FG
Sbjct: 325 RLYMWGS-------------KIWIEPHEMTAVNEYKMVQVACGRQYTVALSENGEVFTFG 371

Query: 401 WMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYH 441
                 LG  DR      L+P  +++L   +++ IS G YH
Sbjct: 372 KGSSNCLGHGDR---KNQLQPVQIEALADVNITSISCGDYH 409



 Score = 75.9 bits (185), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 59/206 (28%), Positives = 92/206 (44%), Gaps = 17/206 (8%)

Query: 290 VYSFGSGSNFCLGHG--------EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 341
           VY++G+G+   LGHG          ++EL P+ ++ F  K I    V  G  H  A+D  
Sbjct: 44  VYTWGNGTLGQLGHGPVVKSGIRNAYEELTPKLLEAFEGKAI--THVEFGASHSAAIDED 101

Query: 342 GYVYTWGKGYCGALGHGDEID-KTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 400
           G +Y WG      LG G+  + +TLP  + +LK    V V      T  +   G +Y +G
Sbjct: 102 GKLYVWGSNEYSKLGLGESSEMETLPREVEALKGVKIVDVSCGDYFTAAVDADGKMYSWG 161

Query: 401 WMG--FGSLGFPDRGVSDKVLRPRILDSLRAHHVS--QISTGLYHTVVVTDRGRLFGFGD 456
           W G      G            PR+L +L    V    +  G +HTV ++  G ++ +G+
Sbjct: 162 WGGSTMKGAGGLGHAGGKDEPTPRLLTTLVDQGVPILTVECGEFHTVALSKDGEIWAWGN 221

Query: 457 NERAQLGHDTLRGCL--EPTEIFIQE 480
            E  +LG+     C   EP E F ++
Sbjct: 222 GEYGRLGNGESDTCEVPEPIEFFSKD 247


>gi|356506490|ref|XP_003522014.1| PREDICTED: uncharacterized protein LOC100798841 [Glycine max]
          Length = 1162

 Score =  119 bits (299), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 102/344 (29%), Positives = 152/344 (44%), Gaps = 25/344 (7%)

Query: 149 TQCVSFTRINFPSAAH-----VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRP 203
           TQ  S T +  P A       V  ++   +H A   + G VFT G  S    GH   ++ 
Sbjct: 178 TQIPSKTDVLIPKALESNVLDVCHIATGAHHIAIATRQGHVFTWGQESGGRLGH-GIDKD 236

Query: 204 IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKS 261
              P LVE L+G   + V  G   T  L+    ++T G  TH  G LGHG       PK 
Sbjct: 237 FSSPVLVEFLEGNNFEFVACGEYHTSALSKSFELYTWGDGTHNVGLLGHGSEASHWIPKM 296

Query: 262 I-APLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRR 320
           +  PLE +  VV IA G  +    T NG +++FG G+   LGHG+Q     P+ +Q    
Sbjct: 297 VNGPLEGL-QVVSIACGTWHSALATSNGKLFTFGDGAFGVLGHGDQESVWYPKEVQLL-- 353

Query: 321 KGIHVVRVSAGDEHVVAL----------DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLS 370
            G+  ++V+ G  H  A+           SS  ++TWG G    LGHG++     P  ++
Sbjct: 354 TGLKTIKVACGVWHTAAIIEVAFQSGSNSSSWKLFTWGDGDMHRLGHGNKETYLQPTRVA 413

Query: 371 SLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAH 430
            L  +   QV      T  L  +G V+  G    G LG P   +S   +   + D L   
Sbjct: 414 PLMEYNFHQVECGHNMTIALTTSGHVFTMGGTEHGQLGNP---MSLGKIPTLVQDKLLGE 470

Query: 431 HVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPT 474
            V +IS G +H  ++T++  ++ +G     +LGH  +     PT
Sbjct: 471 FVEKISCGAHHVAILTNKSEIYTWGMGANGRLGHGDVEDRKSPT 514



 Score = 92.8 bits (229), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 78/272 (28%), Positives = 127/272 (46%), Gaps = 19/272 (6%)

Query: 116 ITTGRYHTLLISNS---SVFSCGSSLCGVLGHGPETTQCVSFTRINFP-SAAHVVQVSAS 171
           +  G YHT  +S S     +  G+   G+LGHG E +  +    +N P     VV ++  
Sbjct: 254 VACGEYHTSALSKSFELYTWGDGTHNVGLLGHGSEASHWIP-KMVNGPLEGLQVVSIACG 312

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
             H+A    +G++FT GD +    GH D    ++ P+ V+ L G+   +V  G+  T  +
Sbjct: 313 TWHSALATSNGKLFTFGDGAFGVLGHGD-QESVWYPKEVQLLTGLKTIKVACGVWHTAAI 371

Query: 232 ----------TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 281
                     +    + T G     +LGHG+      P  +APL E  +  Q+  G +  
Sbjct: 372 IEVAFQSGSNSSSWKLFTWGDGDMHRLGHGNKETYLQPTRVAPLMEY-NFHQVECGHNMT 430

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 341
           +A+T +G V++ G   +  LG+     ++ P  +Q  +  G  V ++S G  HV  L + 
Sbjct: 431 IALTTSGHVFTMGGTEHGQLGNPMSLGKI-PTLVQD-KLLGEFVEKISCGAHHVAILTNK 488

Query: 342 GYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
             +YTWG G  G LGHGD  D+  P  + +LK
Sbjct: 489 SEIYTWGMGANGRLGHGDVEDRKSPTLVVALK 520



 Score = 77.8 bits (190), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 65/234 (27%), Positives = 104/234 (44%), Gaps = 26/234 (11%)

Query: 259 PKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTF 318
           PK++     V  V  IA G  ++   T  G V+++G  S   LGHG   D   P  ++  
Sbjct: 189 PKALE--SNVLDVCHIATGAHHIAIATRQGHVFTWGQESGGRLGHGIDKDFSSPVLVEFL 246

Query: 319 RRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY--CGALGHGDEIDKTLPE----PLSSL 372
             +G +   V+ G+ H  AL  S  +YTWG G    G LGHG E    +P+    PL  L
Sbjct: 247 --EGNNFEFVACGEYHTSALSKSFELYTWGDGTHNVGLLGHGSEASHWIPKMVNGPLEGL 304

Query: 373 KSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHV 432
           +    V +      + +    G ++ FG   FG LG  D+   + V  P+ +  L     
Sbjct: 305 Q---VVSIACGTWHSALATSNGKLFTFGDGAFGVLGHGDQ---ESVWYPKEVQLLTGLKT 358

Query: 433 SQISTGLYHTVVVTDRG----------RLFGFGDNERAQLGHDTLRGCLEPTEI 476
            +++ G++HT  + +            +LF +GD +  +LGH      L+PT +
Sbjct: 359 IKVACGVWHTAAIIEVAFQSGSNSSSWKLFTWGDGDMHRLGHGNKETYLQPTRV 412



 Score = 76.3 bits (186), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 66/226 (29%), Positives = 103/226 (45%), Gaps = 18/226 (7%)

Query: 114 MQITTGRYHTLL-ISNSSVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSAS 171
           + I  G +H+ L  SN  +F+ G    GVLGHG +  + V + + +   +    ++V+  
Sbjct: 307 VSIACGTWHSALATSNGKLFTFGDGAFGVLGHGDQ--ESVWYPKEVQLLTGLKTIKVACG 364

Query: 172 ENHAAFVLQ----------SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQV 221
             H A +++          S ++FT GD      GH +      +P  V  L      QV
Sbjct: 365 VWHTAAIIEVAFQSGSNSSSWKLFTWGDGDMHRLGHGN-KETYLQPTRVAPLMEYNFHQV 423

Query: 222 TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDR-PTPKSIAPLEEVGSVVQIAAGPSY 280
             G N T  LT  GHV T G   HGQLG+  +L + PT      L E   V +I+ G  +
Sbjct: 424 ECGHNMTIALTTSGHVFTMGGTEHGQLGNPMSLGKIPTLVQDKLLGEF--VEKISCGAHH 481

Query: 281 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVV 326
           +  +T    +Y++G G+N  LGHG+  D   P  +   + + I  V
Sbjct: 482 VAILTNKSEIYTWGMGANGRLGHGDVEDRKSPTLVVALKDRNIKNV 527



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 46/170 (27%), Positives = 78/170 (45%), Gaps = 5/170 (2%)

Query: 308 DELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPE 367
           D L P+A+++     + V  ++ G  H+      G+V+TWG+   G LGHG + D + P 
Sbjct: 185 DVLIPKALES---NVLDVCHIATGAHHIAIATRQGHVFTWGQESGGRLGHGIDKDFSSPV 241

Query: 368 PLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILD-S 426
            +  L+ +    V   +  T  L  +  +Y +G  G  ++G    G       P++++  
Sbjct: 242 LVEFLEGNNFEFVACGEYHTSALSKSFELYTWG-DGTHNVGLLGHGSEASHWIPKMVNGP 300

Query: 427 LRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 476
           L    V  I+ G +H+ + T  G+LF FGD     LGH        P E+
Sbjct: 301 LEGLQVVSIACGTWHSALATSNGKLFTFGDGAFGVLGHGDQESVWYPKEV 350



 Score = 48.9 bits (115), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 49/171 (28%), Positives = 77/171 (45%), Gaps = 15/171 (8%)

Query: 109 TSAGNMQITTGRYHTLLI--------SNSS---VFSCGSSLCGVLGHGPETTQCVSFTRI 157
           T    +++  G +HT  I        SNSS   +F+ G      LGHG + T  +  TR+
Sbjct: 354 TGLKTIKVACGVWHTAAIIEVAFQSGSNSSSWKLFTWGDGDMHRLGHGNKETY-LQPTRV 412

Query: 158 NFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVE-ALKGV 216
                 +  QV    N    +  SG VFT G       G+  +   I  P LV+  L G 
Sbjct: 413 APLMEYNFHQVECGHNMTIALTTSGHVFTMGGTEHGQLGNPMSLGKI--PTLVQDKLLGE 470

Query: 217 PCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEE 267
             ++++ G +    LT +  ++T G   +G+LGHGD  DR +P  +  L++
Sbjct: 471 FVEKISCGAHHVAILTNKSEIYTWGMGANGRLGHGDVEDRKSPTLVVALKD 521


>gi|334186523|ref|NP_001154232.2| regulator of chromosome condensation repeat-containing protein
           [Arabidopsis thaliana]
 gi|332658030|gb|AEE83430.1| regulator of chromosome condensation repeat-containing protein
           [Arabidopsis thaliana]
          Length = 1106

 Score =  119 bits (299), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 95/312 (30%), Positives = 142/312 (45%), Gaps = 18/312 (5%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V Q++    H A V + G+VFT  + +    GH      + RP+LVE L       V  G
Sbjct: 272 VHQIACGVRHIALVTRQGEVFTWEEEAGGRLGH-GIQVDVCRPKLVEFLALTNIDFVACG 330

Query: 225 LNFTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 282
              T  ++  G + T G   H  G LGHG  L    PK ++   E   V+ +A G  +  
Sbjct: 331 EYHTCAVSTSGDLFTWGDGIHNVGLLGHGSDLSHWIPKRVSGPVEGLQVLSVACGTWHSA 390

Query: 283 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL---- 338
             T NG +++FG G+   LGHG++     P+ ++     G+  ++V+ G  H VA+    
Sbjct: 391 LATANGKLFTFGDGAFGVLGHGDRESVSYPKEVKML--SGLKTLKVACGVWHTVAIVEVM 448

Query: 339 ------DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVD 392
                  SS  ++TWG G    LGHG++    LP  +SSL  +   Q+      T  L  
Sbjct: 449 NQTGTSTSSRKLFTWGDGDKNRLGHGNKETYLLPTCVSSLIDYNFNQIACGHTFTVALTT 508

Query: 393 TGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLF 452
           +G V+  G    G LG  +   SD  L   + D L    V +IS G +H  V+T R  +F
Sbjct: 509 SGHVFTMGGTSHGQLGSSN---SDGKLPCLVQDRLVGEFVEEISCGDHHVAVLTSRSEVF 565

Query: 453 GFGDNERAQLGH 464
            +G     +LGH
Sbjct: 566 TWGKGSNGRLGH 577



 Score =  105 bits (263), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 85/272 (31%), Positives = 133/272 (48%), Gaps = 19/272 (6%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSL--CGVLGHGPETTQCVSFTRINFP-SAAHVVQVSAS 171
           +  G YHT  +S S  +F+ G  +   G+LGHG + +  +   R++ P     V+ V+  
Sbjct: 327 VACGEYHTCAVSTSGDLFTWGDGIHNVGLLGHGSDLSHWIP-KRVSGPVEGLQVLSVACG 385

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG------- 224
             H+A    +G++FT GD +    GH D    +  P+ V+ L G+   +V  G       
Sbjct: 386 TWHSALATANGKLFTFGDGAFGVLGHGD-RESVSYPKEVKMLSGLKTLKVACGVWHTVAI 444

Query: 225 ---LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 281
              +N TG  T    + T G     +LGHG+      P  ++ L +  +  QIA G ++ 
Sbjct: 445 VEVMNQTGTSTSSRKLFTWGDGDKNRLGHGNKETYLLPTCVSSLIDY-NFNQIACGHTFT 503

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 341
           +A+T +G V++ G  S+  LG      +L P  +Q  R  G  V  +S GD HV  L S 
Sbjct: 504 VALTTSGHVFTMGGTSHGQLGSSNSDGKL-PCLVQD-RLVGEFVEEISCGDHHVAVLTSR 561

Query: 342 GYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
             V+TWGKG  G LGHGD+ D+  P  + +L+
Sbjct: 562 SEVFTWGKGSNGRLGHGDKDDRKTPTLVEALR 593



 Score = 84.7 bits (208), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 71/236 (30%), Positives = 111/236 (47%), Gaps = 23/236 (9%)

Query: 254 LDRPTPKSIAPLEE--VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQ 311
           +D   PK   PLE   V  V QIA G  ++  VT  G V+++   +   LGHG Q D  +
Sbjct: 256 IDVLIPK---PLESNVVLDVHQIACGVRHIALVTRQGEVFTWEEEAGGRLGHGIQVDVCR 312

Query: 312 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY--CGALGHGDEIDKTLPEPL 369
           P+ ++      I  V  + G+ H  A+ +SG ++TWG G    G LGHG ++   +P+ +
Sbjct: 313 PKLVEFLALTNIDFV--ACGEYHTCAVSTSGDLFTWGDGIHNVGLLGHGSDLSHWIPKRV 370

Query: 370 SSLKSHLAV-QVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLR 428
           S     L V  V      + +    G ++ FG   FG LG  DR   + V  P+ +  L 
Sbjct: 371 SGPVEGLQVLSVACGTWHSALATANGKLFTFGDGAFGVLGHGDR---ESVSYPKEVKMLS 427

Query: 429 AHHVSQISTGLYHTVVV----------TDRGRLFGFGDNERAQLGHDTLRGCLEPT 474
                +++ G++HTV +          T   +LF +GD ++ +LGH      L PT
Sbjct: 428 GLKTLKVACGVWHTVAIVEVMNQTGTSTSSRKLFTWGDGDKNRLGHGNKETYLLPT 483



 Score = 83.2 bits (204), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 90/345 (26%), Positives = 142/345 (41%), Gaps = 36/345 (10%)

Query: 115 QITTGRYHTLLISNS-SVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHVV 166
           QI  G  H  L++    VF+      G LGHG       P+  + ++ T I+F       
Sbjct: 274 QIACGVRHIALVTRQGEVFTWEEEAGGRLGHGIQVDVCRPKLVEFLALTNIDF------- 326

Query: 167 QVSASENHAAFVLQSGQVFTCGD--NSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
            V+  E H   V  SG +FT GD  ++    GH          R+   ++G+    V  G
Sbjct: 327 -VACGEYHTCAVSTSGDLFTWGDGIHNVGLLGHGSDLSHWIPKRVSGPVEGLQVLSVACG 385

Query: 225 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 284
              +   T  G + T G    G LGHGD      PK +  L  +   +++A G  + +A+
Sbjct: 386 TWHSALATANGKLFTFGDGAFGVLGHGDRESVSYPKEVKMLSGL-KTLKVACGVWHTVAI 444

Query: 285 ----------TGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEH 334
                     T +  ++++G G    LGHG +   L P  + +      +  +++ G   
Sbjct: 445 VEVMNQTGTSTSSRKLFTWGDGDKNRLGHGNKETYLLPTCVSSLIDYNFN--QIACGHTF 502

Query: 335 VVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSS-LKSHLAVQVCARKRKTFVLVDT 393
            VAL +SG+V+T G    G LG  +  D  LP  +   L      ++        VL   
Sbjct: 503 TVALTTSGHVFTMGGTSHGQLGSSNS-DGKLPCLVQDRLVGEFVEEISCGDHHVAVLTSR 561

Query: 394 GSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTG 438
             V+ +G    G LG  D+   D    P ++++LR  HV  IS G
Sbjct: 562 SEVFTWGKGSNGRLGHGDK---DDRKTPTLVEALRERHVKSISCG 603



 Score = 80.9 bits (198), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 71/250 (28%), Positives = 114/250 (45%), Gaps = 24/250 (9%)

Query: 114 MQITTGRYHTLL-ISNSSVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSAS 171
           + +  G +H+ L  +N  +F+ G    GVLGHG    + VS+ + +   S    ++V+  
Sbjct: 380 LSVACGTWHSALATANGKLFTFGDGAFGVLGHGDR--ESVSYPKEVKMLSGLKTLKVACG 437

Query: 172 ENHAAFVLQ----------SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQV 221
             H   +++          S ++FT GD      GH +    +  P  V +L      Q+
Sbjct: 438 VWHTVAIVEVMNQTGTSTSSRKLFTWGDGDKNRLGHGNKETYLL-PTCVSSLIDYNFNQI 496

Query: 222 TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ-IAAGPSY 280
             G  FT  LT  GHV T G  +HGQLG  ++ D   P  +     VG  V+ I+ G  +
Sbjct: 497 ACGHTFTVALTTSGHVFTMGGTSHGQLGSSNS-DGKLP-CLVQDRLVGEFVEEISCGDHH 554

Query: 281 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 340
           +  +T    V+++G GSN  LGHG++ D   P  ++  R +  HV  +S G        S
Sbjct: 555 VAVLTSRSEVFTWGKGSNGRLGHGDKDDRKTPTLVEALRER--HVKSISCGSN----FTS 608

Query: 341 SGYVYTWGKG 350
           S  ++ W  G
Sbjct: 609 SICIHKWVSG 618


>gi|393912009|gb|EJD76547.1| hect domain and RLD 4 [Loa loa]
          Length = 1043

 Score =  119 bits (299), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 103/356 (28%), Positives = 164/356 (46%), Gaps = 29/356 (8%)

Query: 131 VFSCGSSLCGVLGHGPETT----QCVSFTRINF--PSAAHVVQVSA---SENHAAFVLQS 181
           VF C S   G L   P +     Q + F  + +  P+  H V V A    E H  F+   
Sbjct: 8   VFGCASD--GQLAFRPNSAGNDAQMMLFPHLVYGAPTGQHGVTVKAVASGEKHTLFLAND 65

Query: 182 GQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCG 241
           G+V++CG N +   G        +    V     V   Q++AG + +  ++  G +   G
Sbjct: 66  GKVWSCGSNYNGELGRGGVKEGSYTIYPVHISNAVRIIQISAGRSHSMAVSDDGRLFAWG 125

Query: 242 SNTHGQLG-HGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 300
           SN+HGQL   GD L   TPK +  L E    VQ+A G S+ +++ G G V+ +G  S+  
Sbjct: 126 SNSHGQLAMSGDILISDTPKRVPSLPE---TVQVACGASHTVSLNGGGRVFIWGQQSDGR 182

Query: 301 LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 360
           + H        P  ++ F    + ++++SAG+   +AL +SG ++ WG+   G LG+   
Sbjct: 183 IRHS-------PAEVELF--VSVPIIQISAGNLFTMALTASGTLFAWGRNEEGQLGNFTN 233

Query: 361 IDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLR 420
            D   P  + ++ S + V+ C     +  L   G V+  G   FG LG      S   +R
Sbjct: 234 RDVINPREVPNINSVVVVE-CGDSH-SIALTHEGRVFSCGSDSFGQLGCGQPSRSQNCMR 291

Query: 421 PRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 476
              +  +   HV++I+ G  HT+VV + G++  FG N   QLGH   R  + P  I
Sbjct: 292 G--ITEMLGSHVTRIACGRCHTIVVAN-GKMHTFGLNSNGQLGHGNTRNQITPRMI 344



 Score = 99.0 bits (245), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 86/312 (27%), Positives = 133/312 (42%), Gaps = 59/312 (18%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           + +G  HTL ++N   V+SCGS+  G LG G       +   ++  +A  ++Q+SA  +H
Sbjct: 52  VASGEKHTLFLANDGKVWSCGSNYNGELGRGGVKEGSYTIYPVHISNAVRIIQISAGRSH 111

Query: 175 AAFVLQSGQVFTCGDNSS------------------------------------------ 192
           +  V   G++F  G NS                                           
Sbjct: 112 SMAVSDDGRLFAWGSNSHGQLAMSGDILISDTPKRVPSLPETVQVACGASHTVSLNGGGR 171

Query: 193 -FCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHG 251
            F  G +   R    P  VE    VP  Q++AG  FT  LT  G +   G N  GQLG+ 
Sbjct: 172 VFIWGQQSDGRIRHSPAEVELFVSVPIIQISAGNLFTMALTASGTLFAWGRNEEGQLGNF 231

Query: 252 DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQ 311
              D   P+ +     + SVV +  G S+ +A+T  G V+S GS S   LG G      Q
Sbjct: 232 TNRDVINPREVP---NINSVVVVECGDSHSIALTHEGRVFSCGSDSFGQLGCG------Q 282

Query: 312 PRAIQTFRR-----KGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP 366
           P   Q   R      G HV R++ G  H + + ++G ++T+G    G LGHG+  ++  P
Sbjct: 283 PSRSQNCMRGITEMLGSHVTRIACGRCHTIVV-ANGKMHTFGLNSNGQLGHGNTRNQITP 341

Query: 367 EPLSSLKSHLAV 378
             + S+++  +V
Sbjct: 342 RMIDSVENVASV 353



 Score = 62.0 bits (149), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 54/177 (30%), Positives = 89/177 (50%), Gaps = 11/177 (6%)

Query: 100 VEHSSDIVE--TSAGNMQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTR 156
           + HS   VE   S   +QI+ G   T+ L ++ ++F+ G +  G LG+   T + V   R
Sbjct: 183 IRHSPAEVELFVSVPIIQISAGNLFTMALTASGTLFAWGRNEEGQLGNF--TNRDVINPR 240

Query: 157 INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNS--SFCCGHRDTNRPIFRPRLVEALK 214
              P+   VV V   ++H+  +   G+VF+CG +S     CG    ++   R   +  + 
Sbjct: 241 -EVPNINSVVVVECGDSHSIALTHEGRVFSCGSDSFGQLGCGQPSRSQNCMRG--ITEML 297

Query: 215 GVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSV 271
           G    ++  G   T  +   G +HT G N++GQLGHG+T ++ TP+ I  +E V SV
Sbjct: 298 GSHVTRIACGRCHT-IVVANGKMHTFGLNSNGQLGHGNTRNQITPRMIDSVENVASV 353


>gi|302824131|ref|XP_002993711.1| hypothetical protein SELMODRAFT_431761 [Selaginella moellendorffii]
 gi|300138435|gb|EFJ05203.1| hypothetical protein SELMODRAFT_431761 [Selaginella moellendorffii]
          Length = 991

 Score =  119 bits (299), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 95/326 (29%), Positives = 155/326 (47%), Gaps = 24/326 (7%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V  ++    HAA V + G VF  G+      GH   +  +  P+LV+AL GV  + V  G
Sbjct: 291 VSSIACGSRHAALVTKQGDVFCWGEEYGGRLGH-GIDVDVSEPQLVQALAGVNAELVACG 349

Query: 225 LNFTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSYM 281
              T  +T+ G ++T G++    G +GH + +    PK ++ PLE V  +  IA G  + 
Sbjct: 350 DFHTCAVTLSGELYTWGADAQSGGLVGHSNPVSHWMPKRMSSPLEGV-RISSIACGAWHT 408

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD-- 339
             V+  G +++FG G+   LGHG++ +   P+ +++   KG+  VR + G  H  A+   
Sbjct: 409 ALVSSAGQLFTFGDGTFGVLGHGDKRNLAIPKEVESL--KGLKTVRAACGIWHTAAVVEV 466

Query: 340 ----------SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFV 389
                     SSG ++TWG G    LGHGD+  K +P  +++L  +   QV      T  
Sbjct: 467 IVGYSSATSCSSGKLFTWGDGDKYRLGHGDKEQKLVPTCVAALVDYNFRQVACGHSLTVA 526

Query: 390 LVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILD-SLRAHHVSQISTGLYHTVVVTDR 448
           L  +G V+  G   +G LG P      KV  P ++D  L    V +I  G +H   ++ +
Sbjct: 527 LTTSGRVFTMGSTIYGQLGNPK--ADGKV--PGMVDGELARTFVEEIGCGAHHVAALSSK 582

Query: 449 GRLFGFGDNERAQLGHDTLRGCLEPT 474
             ++ +G     +LGH  +     PT
Sbjct: 583 TEIYTWGKGANGRLGHGDVEDRTAPT 608



 Score = 91.3 bits (225), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 78/274 (28%), Positives = 127/274 (46%), Gaps = 21/274 (7%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLC--GVLGHGPETTQCVSFTRINFP-SAAHVVQVSAS 171
           +  G +HT  ++ S  +++ G+     G++GH    +  +   R++ P     +  ++  
Sbjct: 346 VACGDFHTCAVTLSGELYTWGADAQSGGLVGHSNPVSHWMP-KRMSSPLEGVRISSIACG 404

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
             H A V  +GQ+FT GD +    GH D  R +  P+ VE+LKG+   +   G+  T  +
Sbjct: 405 AWHTALVSSAGQLFTFGDGTFGVLGHGD-KRNLAIPKEVESLKGLKTVRAACGIWHTAAV 463

Query: 232 T------------IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPS 279
                          G + T G     +LGHGD   +  P  +A L +  +  Q+A G S
Sbjct: 464 VEVIVGYSSATSCSSGKLFTWGDGDKYRLGHGDKEQKLVPTCVAALVDY-NFRQVACGHS 522

Query: 280 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 339
             +A+T +G V++ GS     LG+ +   ++         R    V  +  G  HV AL 
Sbjct: 523 LTVALTTSGRVFTMGSTIYGQLGNPKADGKVPGMVDGELAR--TFVEEIGCGAHHVAALS 580

Query: 340 SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
           S   +YTWGKG  G LGHGD  D+T P  + +L+
Sbjct: 581 SKTEIYTWGKGANGRLGHGDVEDRTAPTLVEALR 614



 Score = 83.2 bits (204), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 67/236 (28%), Positives = 105/236 (44%), Gaps = 16/236 (6%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           I  G +HT L+S++  +F+ G    GVLGHG +    +    +        V+ +    H
Sbjct: 401 IACGAWHTALVSSAGQLFTFGDGTFGVLGHGDKRNLAIP-KEVESLKGLKTVRAACGIWH 459

Query: 175 AAFVLQ------------SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 222
            A V++            SG++FT GD   +  GH D  + +  P  V AL     +QV 
Sbjct: 460 TAAVVEVIVGYSSATSCSSGKLFTWGDGDKYRLGHGDKEQKLV-PTCVAALVDYNFRQVA 518

Query: 223 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 282
            G + T  LT  G V T GS  +GQLG+    D   P  +        V +I  G  ++ 
Sbjct: 519 CGHSLTVALTTSGRVFTMGSTIYGQLGNPKA-DGKVPGMVDGELARTFVEEIGCGAHHVA 577

Query: 283 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
           A++    +Y++G G+N  LGHG+  D   P  ++  R K +  V   +    V+ L
Sbjct: 578 ALSSKTEIYTWGKGANGRLGHGDVEDRTAPTLVEALRDKQVKTVACGSSFTAVICL 633



 Score = 82.8 bits (203), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 73/295 (24%), Positives = 135/295 (45%), Gaps = 25/295 (8%)

Query: 207 PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 266
           P+ ++A   +    +  G      +T +G V   G    G+LGHG  +D   P+ +  L 
Sbjct: 280 PKALQAAVVLDVSSIACGSRHAALVTKQGDVFCWGEEYGGRLGHGIDVDVSEPQLVQALA 339

Query: 267 EVGSVVQIAAGPSYMLAVTGNGVVYSFGSG--SNFCLGHGEQHDELQPRAIQTFRRKGIH 324
            V + + +A G  +  AVT +G +Y++G+   S   +GH        P+ + +   +G+ 
Sbjct: 340 GVNAEL-VACGDFHTCAVTLSGELYTWGADAQSGGLVGHSNPVSHWMPKRMSS-PLEGVR 397

Query: 325 VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARK 384
           +  ++ G  H   + S+G ++T+G G  G LGHGD+ +  +P+ + SLK    V+     
Sbjct: 398 ISSIACGAWHTALVSSAGQLFTFGDGTFGVLGHGDKRNLAIPKEVESLKGLKTVRAACGI 457

Query: 385 RKTFVLVD------------TGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHV 432
             T  +V+            +G ++ +G      LG  D+   ++ L P  + +L  ++ 
Sbjct: 458 WHTAAVVEVIVGYSSATSCSSGKLFTWGDGDKYRLGHGDK---EQKLVPTCVAALVDYNF 514

Query: 433 SQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCL------EPTEIFIQEM 481
            Q++ G   TV +T  GR+F  G     QLG+    G +      E    F++E+
Sbjct: 515 RQVACGHSLTVALTTSGRVFTMGSTIYGQLGNPKADGKVPGMVDGELARTFVEEI 569



 Score = 68.9 bits (167), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 53/176 (30%), Positives = 82/176 (46%), Gaps = 4/176 (2%)

Query: 302 GHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEI 361
           G G + D L P+A+Q      + V  ++ G  H   +   G V+ WG+ Y G LGHG ++
Sbjct: 270 GAGSRVDSLVPKALQAAVV--LDVSSIACGSRHAALVTKQGDVFCWGEEYGGRLGHGIDV 327

Query: 362 DKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG-FGSLGFPDRGVSDKVLR 420
           D + P+ + +L    A  V      T  +  +G +Y +G     G L      VS  + +
Sbjct: 328 DVSEPQLVQALAGVNAELVACGDFHTCAVTLSGELYTWGADAQSGGLVGHSNPVSHWMPK 387

Query: 421 PRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 476
            R+   L    +S I+ G +HT +V+  G+LF FGD     LGH   R    P E+
Sbjct: 388 -RMSSPLEGVRISSIACGAWHTALVSSAGQLFTFGDGTFGVLGHGDKRNLAIPKEV 442


>gi|302822159|ref|XP_002992739.1| hypothetical protein SELMODRAFT_430894 [Selaginella moellendorffii]
 gi|300139480|gb|EFJ06220.1| hypothetical protein SELMODRAFT_430894 [Selaginella moellendorffii]
          Length = 982

 Score =  119 bits (298), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 95/326 (29%), Positives = 155/326 (47%), Gaps = 24/326 (7%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V  ++    HAA V + G VF  G+      GH   +  +  P+LV+AL GV  + V  G
Sbjct: 282 VSSIACGSRHAALVTKQGDVFCWGEEYGGRLGH-GIDVDVSEPQLVQALAGVNTELVACG 340

Query: 225 LNFTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSYM 281
              T  +T+ G ++T G++    G +GH + +    PK ++ PLE V  +  IA G  + 
Sbjct: 341 DFHTCAVTLSGELYTWGADAQSGGLVGHSNPVSHWMPKRMSSPLEGV-RISSIACGAWHT 399

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD-- 339
             V+  G +++FG G+   LGHG++ +   P+ +++   KG+  VR + G  H  A+   
Sbjct: 400 ALVSSAGQLFTFGDGTFGVLGHGDKRNLAIPKEVESL--KGLKTVRAACGIWHTAAVVEV 457

Query: 340 ----------SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFV 389
                     SSG ++TWG G    LGHGD+  K +P  +++L  +   QV      T  
Sbjct: 458 IVGYSSATSCSSGKLFTWGDGDKYRLGHGDKEQKLVPTCVAALVDYNFRQVACGHSLTVA 517

Query: 390 LVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILD-SLRAHHVSQISTGLYHTVVVTDR 448
           L  +G V+  G   +G LG P      KV  P ++D  L    V +I  G +H   ++ +
Sbjct: 518 LTTSGRVFTMGSTIYGQLGNPK--ADGKV--PGMVDGELARTFVEEIGCGAHHVAALSSK 573

Query: 449 GRLFGFGDNERAQLGHDTLRGCLEPT 474
             ++ +G     +LGH  +     PT
Sbjct: 574 TEIYTWGKGANGRLGHGDVEDRTAPT 599



 Score = 91.3 bits (225), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 78/274 (28%), Positives = 127/274 (46%), Gaps = 21/274 (7%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLC--GVLGHGPETTQCVSFTRINFP-SAAHVVQVSAS 171
           +  G +HT  ++ S  +++ G+     G++GH    +  +   R++ P     +  ++  
Sbjct: 337 VACGDFHTCAVTLSGELYTWGADAQSGGLVGHSNPVSHWMP-KRMSSPLEGVRISSIACG 395

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
             H A V  +GQ+FT GD +    GH D  R +  P+ VE+LKG+   +   G+  T  +
Sbjct: 396 AWHTALVSSAGQLFTFGDGTFGVLGHGD-KRNLAIPKEVESLKGLKTVRAACGIWHTAAV 454

Query: 232 T------------IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPS 279
                          G + T G     +LGHGD   +  P  +A L +  +  Q+A G S
Sbjct: 455 VEVIVGYSSATSCSSGKLFTWGDGDKYRLGHGDKEQKLVPTCVAALVDY-NFRQVACGHS 513

Query: 280 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 339
             +A+T +G V++ GS     LG+ +   ++         R    V  +  G  HV AL 
Sbjct: 514 LTVALTTSGRVFTMGSTIYGQLGNPKADGKVPGMVDGELAR--TFVEEIGCGAHHVAALS 571

Query: 340 SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
           S   +YTWGKG  G LGHGD  D+T P  + +L+
Sbjct: 572 SKTEIYTWGKGANGRLGHGDVEDRTAPTLVEALR 605



 Score = 83.2 bits (204), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 67/236 (28%), Positives = 105/236 (44%), Gaps = 16/236 (6%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           I  G +HT L+S++  +F+ G    GVLGHG +    +    +        V+ +    H
Sbjct: 392 IACGAWHTALVSSAGQLFTFGDGTFGVLGHGDKRNLAIP-KEVESLKGLKTVRAACGIWH 450

Query: 175 AAFVLQ------------SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 222
            A V++            SG++FT GD   +  GH D  + +  P  V AL     +QV 
Sbjct: 451 TAAVVEVIVGYSSATSCSSGKLFTWGDGDKYRLGHGDKEQKLV-PTCVAALVDYNFRQVA 509

Query: 223 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 282
            G + T  LT  G V T GS  +GQLG+    D   P  +        V +I  G  ++ 
Sbjct: 510 CGHSLTVALTTSGRVFTMGSTIYGQLGNPKA-DGKVPGMVDGELARTFVEEIGCGAHHVA 568

Query: 283 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
           A++    +Y++G G+N  LGHG+  D   P  ++  R K +  V   +    V+ L
Sbjct: 569 ALSSKTEIYTWGKGANGRLGHGDVEDRTAPTLVEALRDKQVKTVACGSSFTAVICL 624



 Score = 82.8 bits (203), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 73/295 (24%), Positives = 135/295 (45%), Gaps = 25/295 (8%)

Query: 207 PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 266
           P+ ++A   +    +  G      +T +G V   G    G+LGHG  +D   P+ +  L 
Sbjct: 271 PKALQAAVVLDVSSIACGSRHAALVTKQGDVFCWGEEYGGRLGHGIDVDVSEPQLVQALA 330

Query: 267 EVGSVVQIAAGPSYMLAVTGNGVVYSFGSG--SNFCLGHGEQHDELQPRAIQTFRRKGIH 324
            V + + +A G  +  AVT +G +Y++G+   S   +GH        P+ + +   +G+ 
Sbjct: 331 GVNTEL-VACGDFHTCAVTLSGELYTWGADAQSGGLVGHSNPVSHWMPKRMSS-PLEGVR 388

Query: 325 VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARK 384
           +  ++ G  H   + S+G ++T+G G  G LGHGD+ +  +P+ + SLK    V+     
Sbjct: 389 ISSIACGAWHTALVSSAGQLFTFGDGTFGVLGHGDKRNLAIPKEVESLKGLKTVRAACGI 448

Query: 385 RKTFVLVD------------TGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHV 432
             T  +V+            +G ++ +G      LG  D+   ++ L P  + +L  ++ 
Sbjct: 449 WHTAAVVEVIVGYSSATSCSSGKLFTWGDGDKYRLGHGDK---EQKLVPTCVAALVDYNF 505

Query: 433 SQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCL------EPTEIFIQEM 481
            Q++ G   TV +T  GR+F  G     QLG+    G +      E    F++E+
Sbjct: 506 RQVACGHSLTVALTTSGRVFTMGSTIYGQLGNPKADGKVPGMVDGELARTFVEEI 560



 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 52/176 (29%), Positives = 81/176 (46%), Gaps = 4/176 (2%)

Query: 302 GHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEI 361
           G G + D L P+A+Q      + V  ++ G  H   +   G V+ WG+ Y G LGHG ++
Sbjct: 261 GAGSRVDSLVPKALQAAVV--LDVSSIACGSRHAALVTKQGDVFCWGEEYGGRLGHGIDV 318

Query: 362 DKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG-FGSLGFPDRGVSDKVLR 420
           D + P+ + +L       V      T  +  +G +Y +G     G L      VS  + +
Sbjct: 319 DVSEPQLVQALAGVNTELVACGDFHTCAVTLSGELYTWGADAQSGGLVGHSNPVSHWMPK 378

Query: 421 PRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 476
            R+   L    +S I+ G +HT +V+  G+LF FGD     LGH   R    P E+
Sbjct: 379 -RMSSPLEGVRISSIACGAWHTALVSSAGQLFTFGDGTFGVLGHGDKRNLAIPKEV 433


>gi|224079652|ref|XP_002305904.1| predicted protein [Populus trichocarpa]
 gi|222848868|gb|EEE86415.1| predicted protein [Populus trichocarpa]
          Length = 1078

 Score =  119 bits (298), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 94/313 (30%), Positives = 142/313 (45%), Gaps = 21/313 (6%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V  +S   NHAA + + G+VF  G+ S    GH+  +  +  P +VE+L G   K V  G
Sbjct: 307 VRNISLGRNHAALITKRGEVFCWGEGSRGKLGHK-VDMDVSSPTIVESLDGFLVKFVACG 365

Query: 225 LNFTGFLTIRGHVHTCGSNTHG--QLGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSYM 281
              T  LT  G +   G N +G   +    T  +  P+ I+ PL  V S+  +A G  + 
Sbjct: 366 EYQTCALTDSGELFVWGENKYGGNLVCEERTGSQWLPRQISGPLAGV-SISNVACGDWHT 424

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS- 340
            AV+ +G ++++G G+   LGHG       P+ +++   KG+ V  V+ G  H  A+   
Sbjct: 425 AAVSSSGQLFTYGDGTFGVLGHGNLQSVSHPKEVESL--KGLWVKSVACGSWHTAAIVDV 482

Query: 341 ----------SGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVL 390
                      G ++TWG G  G LGH D   K  P  ++ L  H  VQV   +  T  L
Sbjct: 483 IFDRFKFNGVGGKLFTWGDGDKGRLGHADLEKKLQPTCVAQLVEHDFVQVSCGRMLTVAL 542

Query: 391 VDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGR 450
             TG +Y  G    G LG P        +   +   L+   V +IS+G YH   +T  G 
Sbjct: 543 TRTGKIYTMGSSVHGQLGNPQAKNKSIAI---VEGKLKEEFVKEISSGSYHVAALTSGGS 599

Query: 451 LFGFGDNERAQLG 463
           ++ +G     QLG
Sbjct: 600 VYTWGKGTNGQLG 612



 Score = 97.4 bits (241), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 95/308 (30%), Positives = 142/308 (46%), Gaps = 30/308 (9%)

Query: 103 SSDIVETSAGNMQ--ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR-IN 158
           S  IVE+  G +   +  G Y T  +++S  +F  G +  G      E T      R I+
Sbjct: 347 SPTIVESLDGFLVKFVACGEYQTCALTDSGELFVWGENKYGGNLVCEERTGSQWLPRQIS 406

Query: 159 FPSA-AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVP 217
            P A   +  V+  + H A V  SGQ+FT GD +    GH +  + +  P+ VE+LKG+ 
Sbjct: 407 GPLAGVSISNVACGDWHTAAVSSSGQLFTYGDGTFGVLGHGNL-QSVSHPKEVESLKGLW 465

Query: 218 CKQVTAGLNFTG-----------FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 266
            K V  G   T            F  + G + T G    G+LGH D   +  P  +A L 
Sbjct: 466 VKSVACGSWHTAAIVDVIFDRFKFNGVGGKLFTWGDGDKGRLGHADLEKKLQPTCVAQLV 525

Query: 267 EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVV 326
           E    VQ++ G    +A+T  G +Y+ GS  +  LG+ +  +  +  AI   + K   V 
Sbjct: 526 E-HDFVQVSCGRMLTVALTRTGKIYTMGSSVHGQLGNPQAKN--KSIAIVEGKLKEEFVK 582

Query: 327 RVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK----------SHL 376
            +S+G  HV AL S G VYTWGKG  G LG G+  D+ +P  + +L+          S+L
Sbjct: 583 EISSGSYHVAALTSGGSVYTWGKGTNGQLGLGNVEDRNVPTLVEALRDRQVQSIACGSNL 642

Query: 377 AVQVCARK 384
              +C  K
Sbjct: 643 TAAICLHK 650



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 77/273 (28%), Positives = 126/273 (46%), Gaps = 22/273 (8%)

Query: 207 PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 266
           P+L+E    +  + ++ G N    +T RG V   G  + G+LGH   +D  +P  +  L+
Sbjct: 296 PKLLEPTVMLDVRNISLGRNHAALITKRGEVFCWGEGSRGKLGHKVDMDVSSPTIVESLD 355

Query: 267 EVGSVVQ-IAAGPSYMLAVTGNGVVYSFGS---GSNFCLGHGEQHDELQPRAIQTFRRKG 322
             G +V+ +A G     A+T +G ++ +G    G N  +       +  PR I +    G
Sbjct: 356 --GFLVKFVACGEYQTCALTDSGELFVWGENKYGGNL-VCEERTGSQWLPRQI-SGPLAG 411

Query: 323 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCA 382
           + +  V+ GD H  A+ SSG ++T+G G  G LGHG+    + P+ + SLK      V  
Sbjct: 412 VSISNVACGDWHTAAVSSSGQLFTYGDGTFGVLGHGNLQSVSHPKEVESLKGLWVKSVAC 471

Query: 383 RKRKTFVLVDT-----------GSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHH 431
               T  +VD            G ++ +G    G LG  D    +K L+P  +  L  H 
Sbjct: 472 GSWHTAAIVDVIFDRFKFNGVGGKLFTWGDGDKGRLGHADL---EKKLQPTCVAQLVEHD 528

Query: 432 VSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 464
             Q+S G   TV +T  G+++  G +   QLG+
Sbjct: 529 FVQVSCGRMLTVALTRTGKIYTMGSSVHGQLGN 561



 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 64/235 (27%), Positives = 107/235 (45%), Gaps = 20/235 (8%)

Query: 254 LDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPR 313
           +D   PK + P   +  V  I+ G ++   +T  G V+ +G GS   LGH    D   P 
Sbjct: 291 VDSLLPKLLEPTVML-DVRNISLGRNHAALITKRGEVFCWGEGSRGKLGHKVDMDVSSPT 349

Query: 314 AIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKG-YCGALGHGDEI-DKTLPEPLSS 371
            +++    G  V  V+ G+    AL  SG ++ WG+  Y G L   +    + LP  +S 
Sbjct: 350 IVESL--DGFLVKFVACGEYQTCALTDSGELFVWGENKYGGNLVCEERTGSQWLPRQISG 407

Query: 372 LKSHLAV-QVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAH 430
             + +++  V      T  +  +G ++ +G   FG LG    G    V  P+ ++SL+  
Sbjct: 408 PLAGVSISNVACGDWHTAAVSSSGQLFTYGDGTFGVLG---HGNLQSVSHPKEVESLKGL 464

Query: 431 HVSQISTGLYHTVVVTDR-----------GRLFGFGDNERAQLGHDTLRGCLEPT 474
            V  ++ G +HT  + D            G+LF +GD ++ +LGH  L   L+PT
Sbjct: 465 WVKSVACGSWHTAAIVDVIFDRFKFNGVGGKLFTWGDGDKGRLGHADLEKKLQPT 519



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 48/171 (28%), Positives = 79/171 (46%), Gaps = 2/171 (1%)

Query: 306 QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTL 365
           Q D L P+ ++      + V  +S G  H   +   G V+ WG+G  G LGH  ++D + 
Sbjct: 290 QVDSLLPKLLEPTVM--LDVRNISLGRNHAALITKRGEVFCWGEGSRGKLGHKVDMDVSS 347

Query: 366 PEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILD 425
           P  + SL   L   V   + +T  L D+G ++ +G   +G     +     + L  +I  
Sbjct: 348 PTIVESLDGFLVKFVACGEYQTCALTDSGELFVWGENKYGGNLVCEERTGSQWLPRQISG 407

Query: 426 SLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 476
            L    +S ++ G +HT  V+  G+LF +GD     LGH  L+    P E+
Sbjct: 408 PLAGVSISNVACGDWHTAAVSSSGQLFTYGDGTFGVLGHGNLQSVSHPKEV 458


>gi|149033232|gb|EDL88033.1| potential ubiquitin ligase, isoform CRA_a [Rattus norvegicus]
          Length = 449

 Score =  119 bits (298), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 80/266 (30%), Positives = 130/266 (48%), Gaps = 5/266 (1%)

Query: 206 RPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL 265
           +PR +EA  G+   +  +G   +  L     V++CG N+ GQLG         P+ I  L
Sbjct: 11  QPRRLEAGTGLKLLKAASGERHSLLLFSNHRVYSCGDNSRGQLGQKSPQSTKRPEPIQAL 70

Query: 266 EEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHD-ELQPRAIQTFRRKGIH 324
             V  +  ++ G  + +AV   G V+++G+GS   LG GE  +    P  I +    GI 
Sbjct: 71  STV-HIDLVSCGKEHSVAVCHQGRVFTWGAGSEGQLGIGESKEISFMPTKINSL--AGIK 127

Query: 325 VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEI-DKTLPEPLSSLKSHLAVQVCAR 383
           +++VS G  H +AL   G V++WG    G LG G+ +  +  P+ + SL+     QV A 
Sbjct: 128 IIQVSCGHYHSLALSEDGQVFSWGSNRQGQLGLGNNLCSQASPQKVKSLEGIPLAQVAAG 187

Query: 384 KRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV 443
              +F L   G+ +G+G    G L        +++ +P  + +L+  +V  IS G  HT 
Sbjct: 188 GTHSFALSLMGTSFGWGNNRSGQLALSGNSAKEQIYKPHSIGALKTLNVVYISCGYEHTS 247

Query: 444 VVTDRGRLFGFGDNERAQLGHDTLRG 469
           V+T+ G++F FG +   QL H    G
Sbjct: 248 VLTEDGQVFTFGGSSSEQLQHSPRSG 273



 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 84/293 (28%), Positives = 137/293 (46%), Gaps = 11/293 (3%)

Query: 114 MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGH-GPETTQCVSFTRINFPSAAHVVQVSAS 171
           ++  +G  H+LL+ SN  V+SCG +  G LG   P++T+      I   S  H+  VS  
Sbjct: 24  LKAASGERHSLLLFSNHRVYSCGDNSRGQLGQKSPQSTK--RPEPIQALSTVHIDLVSCG 81

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
           + H+  V   G+VFT G  S    G  ++    F P  + +L G+   QV+ G   +  L
Sbjct: 82  KEHSVAVCHQGRVFTWGAGSEGQLGIGESKEISFMPTKINSLAGIKIIQVSCGHYHSLAL 141

Query: 232 TIRGHVHTCGSNTHGQLGHGDTL-DRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 290
           +  G V + GSN  GQLG G+ L  + +P+ +  LE +  + Q+AAG ++  A++  G  
Sbjct: 142 SEDGQVFSWGSNRQGQLGLGNNLCSQASPQKVKSLEGI-PLAQVAAGGTHSFALSLMGTS 200

Query: 291 YSFG---SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 347
           + +G   SG     G+  +    +P +I     K ++VV +S G EH   L   G V+T+
Sbjct: 201 FGWGNNRSGQLALSGNSAKEQIYKPHSIGAL--KTLNVVYISCGYEHTSVLTEDGQVFTF 258

Query: 348 GKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 400
           G      L H     +  P+ +  +  H++   C        +  TG V   G
Sbjct: 259 GGSSSEQLQHSPRSGRGGPQLIEGIGGHVSQIECGSYHTIAYVYTTGQVVSLG 311



 Score = 95.1 bits (235), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 82/306 (26%), Positives = 147/306 (48%), Gaps = 14/306 (4%)

Query: 156 RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 215
           R+   +   +++ ++ E H+  +  + +V++CGDNS    G + + +   RP  ++AL  
Sbjct: 14  RLEAGTGLKLLKAASGERHSLLLFSNHRVYSCGDNSRGQLGQK-SPQSTKRPEPIQALST 72

Query: 216 VPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRP-TPKSIAPLEEVGSVVQI 274
           V    V+ G   +  +  +G V T G+ + GQLG G++ +    P  I  L  +  ++Q+
Sbjct: 73  VHIDLVSCGKEHSVAVCHQGRVFTWGAGSEGQLGIGESKEISFMPTKINSLAGI-KIIQV 131

Query: 275 AAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH-DELQPRAIQTFRRKGIHVVRVSAGDE 333
           + G  + LA++ +G V+S+GS     LG G     +  P+ +++   +GI + +V+AG  
Sbjct: 132 SCGHYHSLALSEDGQVFSWGSNRQGQLGLGNNLCSQASPQKVKSL--EGIPLAQVAAGGT 189

Query: 334 HVVALDSSGYVYTWGKGYCGALG-HGDEIDKTL--PEPLSSLKSHLAVQVCARKRKTFVL 390
           H  AL   G  + WG    G L   G+   + +  P  + +LK+   V +      T VL
Sbjct: 190 HSFALSLMGTSFGWGNNRSGQLALSGNSAKEQIYKPHSIGALKTLNVVYISCGYEHTSVL 249

Query: 391 VDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV-VTDRG 449
            + G V+ FG      L    R        P++++ +   HVSQI  G YHT+  V   G
Sbjct: 250 TEDGQVFTFGGSSSEQLQHSPRSGRGG---PQLIEGI-GGHVSQIECGSYHTIAYVYTTG 305

Query: 450 RLFGFG 455
           ++   G
Sbjct: 306 QVVSLG 311



 Score = 55.5 bits (132), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 51/187 (27%), Positives = 77/187 (41%), Gaps = 21/187 (11%)

Query: 114 MQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +Q++ G YH+L +S +  VFS GS+  G LG G       S  ++       + QV+A  
Sbjct: 129 IQVSCGHYHSLALSEDGQVFSWGSNRQGQLGLGNNLCSQASPQKVKSLEGIPLAQVAAGG 188

Query: 173 NHAAFVLQSGQVFTCGDNSS--FCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
            H+  +   G  F  G+N S             I++P  + ALK +    ++ G   T  
Sbjct: 189 THSFALSLMGTSFGWGNNRSGQLALSGNSAKEQIYKPHSIGALKTLNVVYISCGYEHTSV 248

Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPK------------------SIAPLEEVGSVV 272
           LT  G V T G ++  QL H     R  P+                  +IA +   G VV
Sbjct: 249 LTEDGQVFTFGGSSSEQLQHSPRSGRGGPQLIEGIGGHVSQIECGSYHTIAYVYTTGQVV 308

Query: 273 QIAAGPS 279
            +  GPS
Sbjct: 309 SLGRGPS 315


>gi|90657578|gb|ABD96878.1| hypothetical protein [Cleome spinosa]
          Length = 393

 Score =  119 bits (298), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 107/354 (30%), Positives = 159/354 (44%), Gaps = 34/354 (9%)

Query: 125 LISNSSVFSCGSSLCGVLGHGP-ETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQ 183
           + ++++V + GS   G LG G  +  + V       P A   V VS S N  A +   G 
Sbjct: 1   MAASTTVIAWGSGEDGQLGLGTNDEKEWVCVVEALEPYAVRSV-VSGSRNSLA-ICDDGT 58

Query: 184 VFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 243
           +FT G N     GH    +    P  V+AL  V   Q   G      +  +G  +  G N
Sbjct: 59  LFTWGWNQRGTLGHPPETKTENIPSQVKALANVKIVQAAIGGWHCLAVDDQGRAYAWGGN 118

Query: 244 THGQLGH---GDTLDRP------TPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 294
            +GQ G     D ++RP       PK  AP      V Q+AAG ++ + +T  G V+S+G
Sbjct: 119 EYGQCGEEPGKDEMERPLRRDIVIPKRCAPKL---VVRQVAAGGTHSVVLTREGHVWSWG 175

Query: 295 SGSNFCLGHGEQHDELQPRAIQTF----RRKGIHVVR-VSAGDEHVVALDSSGYVYTWGK 349
                            P  I+      R +G+  VR ++ G  H +AL+ +G ++ WG 
Sbjct: 176 Q-------------PWPPGDIKQISIPVRVQGLENVRLIAVGAFHNLALEENGTLWAWGN 222

Query: 350 GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGF 409
              G LG GD   ++ P P+  L S   V + A    +  L D G VYG+G    G LGF
Sbjct: 223 NEYGQLGTGDTQPRSQPIPVQGLDSLTLVDIAAGGWHSTALTDKGEVYGWGRGEHGRLGF 282

Query: 410 PDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 463
            D   S K+L P+ ++ L    + Q+S G  H+V +T  GR+F FG  +  +LG
Sbjct: 283 GDNDKSSKML-PQKVNLLAGEDIIQVSCGGTHSVALTRDGRIFSFGRGDHGRLG 335



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 87/309 (28%), Positives = 134/309 (43%), Gaps = 32/309 (10%)

Query: 116 ITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           + +G  ++L I  + ++F+ G +  G LGH PET      +++   +   +VQ +    H
Sbjct: 43  VVSGSRNSLAICDDGTLFTWGWNQRGTLGHPPETKTENIPSQVKALANVKIVQAAIGGWH 102

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHR----DTNRPIFR---------PRLVEALKGVPCKQV 221
              V   G+ +  G N    CG      +  RP+ R         P+LV        +QV
Sbjct: 103 CLAVDDQGRAYAWGGNEYGQCGEEPGKDEMERPLRRDIVIPKRCAPKLV-------VRQV 155

Query: 222 TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 281
            AG   +  LT  GHV + G         GD      P  +  LE   +V  IA G  + 
Sbjct: 156 AAGGTHSVVLTREGHVWSWGQ----PWPPGDIKQISIPVRVQGLE---NVRLIAVGAFHN 208

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 341
           LA+  NG ++++G+     LG G+     QP  +Q      + +V ++AG  H  AL   
Sbjct: 209 LALEENGTLWAWGNNEYGQLGTGDTQPRSQPIPVQGL--DSLTLVDIAAGGWHSTALTDK 266

Query: 342 GYVYTWGKGYCGALGHG--DEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGF 399
           G VY WG+G  G LG G  D+  K LP+ ++ L     +QV      +  L   G ++ F
Sbjct: 267 GEVYGWGRGEHGRLGFGDNDKSSKMLPQKVNLLAGEDIIQVSCGGTHSVALTRDGRIFSF 326

Query: 400 GWMGFGSLG 408
           G    G LG
Sbjct: 327 GRGDHGRLG 335



 Score = 63.2 bits (152), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 36/135 (26%), Positives = 66/135 (48%), Gaps = 2/135 (1%)

Query: 338 LDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVY 397
           + +S  V  WG G  G LG G   +K     + +L+ +    V +  R +  + D G+++
Sbjct: 1   MAASTTVIAWGSGEDGQLGLGTNDEKEWVCVVEALEPYAVRSVVSGSRNSLAICDDGTLF 60

Query: 398 GFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDN 457
            +GW   G+LG P    ++ +  P  + +L    + Q + G +H + V D+GR + +G N
Sbjct: 61  TWGWNQRGTLGHPPETKTENI--PSQVKALANVKIVQAAIGGWHCLAVDDQGRAYAWGGN 118

Query: 458 ERAQLGHDTLRGCLE 472
           E  Q G +  +  +E
Sbjct: 119 EYGQCGEEPGKDEME 133



 Score = 40.0 bits (92), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 42/157 (26%), Positives = 68/157 (43%), Gaps = 7/157 (4%)

Query: 116 ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           I  G +H L L  N ++++ G++  G LG G +T        +    +  +V ++A   H
Sbjct: 201 IAVGAFHNLALEENGTLWAWGNNEYGQLGTG-DTQPRSQPIPVQGLDSLTLVDIAAGGWH 259

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTNRP-IFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
           +  +   G+V+  G       G  D ++     P+ V  L G    QV+ G   +  LT 
Sbjct: 260 STALTDKGEVYGWGRGEHGRLGFGDNDKSSKMLPQKVNLLAGEDIIQVSCGGTHSVALTR 319

Query: 234 RGHVHTCGSNTHGQLGHGD--TLDRP--TPKSIAPLE 266
            G + + G   HG+LG G   T  +P   P  I P E
Sbjct: 320 DGRIFSFGRGDHGRLGCGRKVTTGQPLDVPVKIPPPE 356


>gi|295696487|ref|YP_003589725.1| S-layer protein [Kyrpidia tusciae DSM 2912]
 gi|295412089|gb|ADG06581.1| S-layer domain protein [Kyrpidia tusciae DSM 2912]
          Length = 1423

 Score =  119 bits (297), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 102/326 (31%), Positives = 157/326 (48%), Gaps = 21/326 (6%)

Query: 159 FPSAAHVV---QVSASENHAAFVLQSGQ-VFTCGDNSSFCCGH-RDTNRPIFRPRLVEAL 213
           +P++A V+    VSA  +H+  VL S Q V+  GDN++   G    T R    P      
Sbjct: 63  YPASAAVLGEAAVSAGGSHS-LVLTSDQTVWAWGDNTNGQLGDGTTTGRQTPTPA----- 116

Query: 214 KGVP-CKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV 272
           +G+P   QV+AG + +  LT  G V   G N+ GQLG G T D  TP  +  L    ++ 
Sbjct: 117 QGLPSVAQVSAGESHSLALTDDGRVFAWGLNSSGQLGDGTTADSRTPVQVQGLATDSTIK 176

Query: 273 QIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGD 332
            +AAG ++ LA+T +G V+++G  S+  LG+    D   P  +Q       +V  V+AG 
Sbjct: 177 VVAAGGNHSLALTSDGRVFAWGKNSSGQLGNNSTVDSSIPVQVQGLPA---NVTAVAAGG 233

Query: 333 EHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKS-HLAVQVCARKRKTFVLV 391
            H +AL S G +Y WG    G LG G   + + P  ++ L +    V V A K  +  L+
Sbjct: 234 NHSLALTSDGRIYAWGLNSSGQLGDGTTSNSSTPVLVAGLPAGSKPVAVSAGKDHSLALM 293

Query: 392 DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRL 451
             G+VY +G   +G LG    G +     P  +  L   +V+ +S G   ++ +T  G +
Sbjct: 294 QDGTVYAWGGNSYGQLG---NGTTTASEMPVQVTGL--ANVTAVSAGGSDSLALTSDGYV 348

Query: 452 FGFGDNERAQLGHDTLRGCLEPTEIF 477
           + +G N   QLG  T      P  +F
Sbjct: 349 YAWGLNSSGQLGDGTTSNRNTPVRVF 374



 Score =  114 bits (286), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 98/301 (32%), Positives = 139/301 (46%), Gaps = 15/301 (4%)

Query: 112 GNMQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSA 170
           G   ++ G  H+L L S+ +V++ G +  G LG G  T +         PS   V QVSA
Sbjct: 71  GEAAVSAGGSHSLVLTSDQTVWAWGDNTNGQLGDGTTTGRQTPTPAQGLPS---VAQVSA 127

Query: 171 SENHAAFVLQSGQVFTCGDNSSFCCGH---RDTNRPIFRPRLVEALKGVPCKQVTAGLNF 227
            E+H+  +   G+VF  G NSS   G     D+  P+    L         K V AG N 
Sbjct: 128 GESHSLALTDDGRVFAWGLNSSGQLGDGTTADSRTPVQVQGLATDST---IKVVAAGGNH 184

Query: 228 TGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN 287
           +  LT  G V   G N+ GQLG+  T+D   P  +  L    +V  +AAG ++ LA+T +
Sbjct: 185 SLALTSDGRVFAWGKNSSGQLGNNSTVDSSIPVQVQGLPA--NVTAVAAGGNHSLALTSD 242

Query: 288 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 347
           G +Y++G  S+  LG G   +   P  +      G   V VSAG +H +AL   G VY W
Sbjct: 243 GRIYAWGLNSSGQLGDGTTSNSSTPVLVAGL-PAGSKPVAVSAGKDHSLALMQDGTVYAW 301

Query: 348 GKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSL 407
           G    G LG+G      +P  ++ L +  A  V A    +  L   G VY +G    G L
Sbjct: 302 GGNSYGQLGNGTTTASEMPVQVTGLANVTA--VSAGGSDSLALTSDGYVYAWGLNSSGQL 359

Query: 408 G 408
           G
Sbjct: 360 G 360



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 80/258 (31%), Positives = 119/258 (46%), Gaps = 17/258 (6%)

Query: 115 QITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
           Q++ G  H+L L  +  VF+ G +  G LG G               + + +  V+A  N
Sbjct: 124 QVSAGESHSLALTDDGRVFAWGLNSSGQLGDGTTADSRTPVQVQGLATDSTIKVVAAGGN 183

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHR---DTNRPIFRPRLVEALKGVPCK--QVTAGLNFT 228
           H+  +   G+VF  G NSS   G+    D++ P+        ++G+P     V AG N +
Sbjct: 184 HSLALTSDGRVFAWGKNSSGQLGNNSTVDSSIPV-------QVQGLPANVTAVAAGGNHS 236

Query: 229 GFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG 288
             LT  G ++  G N+ GQLG G T +  TP  +A L      V ++AG  + LA+  +G
Sbjct: 237 LALTSDGRIYAWGLNSSGQLGDGTTSNSSTPVLVAGLPAGSKPVAVSAGKDHSLALMQDG 296

Query: 289 VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 348
            VY++G  S   LG+G       P  +        +V  VSAG    +AL S GYVY WG
Sbjct: 297 TVYAWGGNSYGQLGNGTTTASEMPVQVTGLA----NVTAVSAGGSDSLALTSDGYVYAWG 352

Query: 349 KGYCGALGHGDEIDKTLP 366
               G LG G   ++  P
Sbjct: 353 LNSSGQLGDGTTSNRNTP 370



 Score = 59.3 bits (142), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 51/174 (29%), Positives = 85/174 (48%), Gaps = 7/174 (4%)

Query: 116 ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           +  G  H+L L S+  +++ G +  G LG G  +           P+ +  V VSA ++H
Sbjct: 229 VAAGGNHSLALTSDGRIYAWGLNSSGQLGDGTTSNSSTPVLVAGLPAGSKPVAVSAGKDH 288

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 234
           +  ++Q G V+  G NS    G+  T      P  V  L  V    V+AG + +  LT  
Sbjct: 289 SLALMQDGTVYAWGGNSYGQLGNGTTTASEM-PVQVTGLANVTA--VSAGGSDSLALTSD 345

Query: 235 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSV---VQIAAGPSYMLAVT 285
           G+V+  G N+ GQLG G T +R TP  +  +   G++   +Q++ G S  +A++
Sbjct: 346 GYVYAWGLNSSGQLGDGTTSNRNTPVRVFSVLSTGALLTDLQLSDGSSNPIALS 399


>gi|66826123|ref|XP_646416.1| regulator of chromosome condensation  domain-containing protein
            [Dictyostelium discoideum AX4]
 gi|60474380|gb|EAL72317.1| regulator of chromosome condensation  domain-containing protein
            [Dictyostelium discoideum AX4]
          Length = 2044

 Score =  119 bits (297), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 89/292 (30%), Positives = 139/292 (47%), Gaps = 14/292 (4%)

Query: 161  SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQ 220
            S + VV VS    H A V  +G++ T G   +   GH DTN  I  P+++++L      Q
Sbjct: 802  SLSDVVSVSIGFCHGAAVRANGELLTWGVGENGQLGHGDTNNQI-EPKIIQSLTSFWITQ 860

Query: 221  VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 280
            V  G   T  LT  G V++ G++ +GQLG GD     +P  ++ LE+  +V+QIA+G ++
Sbjct: 861  VQCGEKHTICLTKNGKVYSWGASEYGQLGLGDVTQHSSPMQVSALEKY-NVLQIASGSTH 919

Query: 281  MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 340
               +T +  V  FG+G+            L P        K +H+ R+  G     A+  
Sbjct: 920  CAVLTTSKEVLVFGNGAAMGAASVVSLPTLVPSL------KYLHIDRLCCGHYSTAAITE 973

Query: 341  SGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 400
             G VYTWG G    LGHG    +T P+ + +L++    Q+    R T  L D+G ++  G
Sbjct: 974  CGDVYTWGTGQ--ELGHGGNSTETSPKLIEALRNQSIRQISCGGRHTAFLTDSGRIFTCG 1031

Query: 401  WMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLF 452
               FG LG     +S    +P+ ++SL       +S G  + V + D  R F
Sbjct: 1032 KDSFGQLG----QMSGDQNKPKRIESLTKTTFISVSCGENYNVALFDTTRSF 1079



 Score =  100 bits (248), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 77/260 (29%), Positives = 122/260 (46%), Gaps = 18/260 (6%)

Query: 207  PRLVEALKGVPCKQVTAGLNFTGFLTIR--GHVHTCGSNTHGQLGHGDTLDRPTPKSIAP 264
            P  +E+L  V    V+  + F     +R  G + T G   +GQLGHGDT ++  PK I  
Sbjct: 797  PFKLESLSDV----VSVSIGFCHGAAVRANGELLTWGVGENGQLGHGDTNNQIEPKIIQS 852

Query: 265  LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH 324
            L     + Q+  G  + + +T NG VYS+G+     LG G+      P  +    +   +
Sbjct: 853  LTSFW-ITQVQCGEKHTICLTKNGKVYSWGASEYGQLGLGDVTQHSSPMQVSALEK--YN 909

Query: 325  VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARK 384
            V+++++G  H   L +S  V  +G G   A+G    +  +LP  + SLK     ++C   
Sbjct: 910  VLQIASGSTHCAVLTTSKEVLVFGNG--AAMGAASVV--SLPTLVPSLKYLHIDRLCCGH 965

Query: 385  RKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV 444
              T  + + G VY   W     LG    G +     P+++++LR   + QIS G  HT  
Sbjct: 966  YSTAAITECGDVYT--WGTGQELG---HGGNSTETSPKLIEALRNQSIRQISCGGRHTAF 1020

Query: 445  VTDRGRLFGFGDNERAQLGH 464
            +TD GR+F  G +   QLG 
Sbjct: 1021 LTDSGRIFTCGKDSFGQLGQ 1040



 Score = 82.8 bits (203), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 73/233 (31%), Positives = 113/233 (48%), Gaps = 17/233 (7%)

Query: 232 TIRGHVHTCGSNTHGQLGHGDTL---DRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG 288
           T RG + T GS ++ +LG   T     +PTP+ + P   +  +  I++G  Y   +T NG
Sbjct: 711 TSRG-LMTWGSASNCKLGFKVTAKDQSQPTPERL-PNFNIPDICSISSGSYYSSVLTENG 768

Query: 289 VVYSFGSGSNFC-----LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 343
            VY +G G+        LG  +  D+L P  +++       VV VS G  H  A+ ++G 
Sbjct: 769 DVYLWGRGAVKTPAVPILGIPQIEDQLLPFKLESLS----DVVSVSIGFCHGAAVRANGE 824

Query: 344 VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 403
           + TWG G  G LGHGD  ++  P+ + SL S    QV   ++ T  L   G VY +G   
Sbjct: 825 LLTWGVGENGQLGHGDTNNQIEPKIIQSLTSFWITQVQCGEKHTICLTKNGKVYSWGASE 884

Query: 404 FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGD 456
           +G LG  D         P  + +L  ++V QI++G  H  V+T    +  FG+
Sbjct: 885 YGQLGLGDVTQHSS---PMQVSALEKYNVLQIASGSTHCAVLTTSKEVLVFGN 934



 Score = 73.2 bits (178), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 57/216 (26%), Positives = 93/216 (43%), Gaps = 49/216 (22%)

Query: 115  QITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
            Q+  G  HT+ L  N  V+S G+S  G LG G + TQ  S  +++     +V+Q+++   
Sbjct: 860  QVQCGEKHTICLTKNGKVYSWGASEYGQLGLG-DVTQHSSPMQVSALEKYNVLQIASGST 918

Query: 174  HAAFVLQSGQVFTCGDNSS-----------------------FCCGHRDT---------- 200
            H A +  S +V   G+ ++                        CCGH  T          
Sbjct: 919  HCAVLTTSKEVLVFGNGAAMGAASVVSLPTLVPSLKYLHIDRLCCGHYSTAAITECGDVY 978

Query: 201  ------------NRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQL 248
                        N     P+L+EAL+    +Q++ G   T FLT  G + TCG ++ GQL
Sbjct: 979  TWGTGQELGHGGNSTETSPKLIEALRNQSIRQISCGGRHTAFLTDSGRIFTCGKDSFGQL 1038

Query: 249  GHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 284
            G     D+  PK I  L +  + + ++ G +Y +A+
Sbjct: 1039 GQMSG-DQNKPKRIESLTKT-TFISVSCGENYNVAL 1072



 Score = 50.4 bits (119), Expect = 0.002,   Method: Composition-based stats.
 Identities = 48/182 (26%), Positives = 80/182 (43%), Gaps = 19/182 (10%)

Query: 292 SFGSGSNFCLGH---GEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 348
           ++GS SN  LG     +   +  P  +  F    I  +   +    V  L  +G VY WG
Sbjct: 717 TWGSASNCKLGFKVTAKDQSQPTPERLPNFNIPDICSISSGSYYSSV--LTENGDVYLWG 774

Query: 349 KGYCGA-----LGHGDEIDKTLPEPLSSLKSHLAVQV--CARKRKTFVLVDTGSVYGFGW 401
           +G         LG     D+ LP  L SL   ++V +  C        +   G +  +G 
Sbjct: 775 RGAVKTPAVPILGIPQIEDQLLPFKLESLSDVVSVSIGFC----HGAAVRANGELLTWGV 830

Query: 402 MGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQ 461
              G LG  D   ++  + P+I+ SL +  ++Q+  G  HT+ +T  G+++ +G +E  Q
Sbjct: 831 GENGQLGHGD---TNNQIEPKIIQSLTSFWITQVQCGEKHTICLTKNGKVYSWGASEYGQ 887

Query: 462 LG 463
           LG
Sbjct: 888 LG 889



 Score = 42.4 bits (98), Expect = 0.52,   Method: Composition-based stats.
 Identities = 42/154 (27%), Positives = 61/154 (39%), Gaps = 9/154 (5%)

Query: 329 SAGDEHVVALDSSGYVYTWGKGYCGALGH---GDEIDKTLPEPLSSLKSHLAVQVCARKR 385
           S      + LD+S  + TWG      LG      +  +  PE L +        + +   
Sbjct: 700 STAHRSAIHLDTSRGLMTWGSASNCKLGFKVTAKDQSQPTPERLPNFNIPDICSISSGSY 759

Query: 386 KTFVLVDTGSVYGFGWMGFGSLGFPDRGV---SDKVLRPRILDSLRAHHVSQISTGLYHT 442
            + VL + G VY +G     +   P  G+    D++L P  L+SL    V  +S G  H 
Sbjct: 760 YSSVLTENGDVYLWGRGAVKTPAVPILGIPQIEDQLL-PFKLESLS--DVVSVSIGFCHG 816

Query: 443 VVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 476
             V   G L  +G  E  QLGH      +EP  I
Sbjct: 817 AAVRANGELLTWGVGENGQLGHGDTNNQIEPKII 850


>gi|449475602|ref|XP_004154499.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein
           LOC101229506 [Cucumis sativus]
          Length = 1079

 Score =  119 bits (297), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 87/314 (27%), Positives = 143/314 (45%), Gaps = 19/314 (6%)

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
           H+A V + G+VFT G+ +    G     + + +PRLVEAL       V  G   T  +T+
Sbjct: 248 HSAIVTRQGEVFTWGEETGGRLG-LGMGKDVTQPRLVEALAATTVDLVACGEFHTCAVTM 306

Query: 234 RGHVHTCGSNTH--GQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
            G ++T G   H  G LG+G  +    PK I+ + E   V  +A GP +   ++  G ++
Sbjct: 307 DGELYTWGDGVHNAGLLGNGTDVSHWMPKRISGILEGLQVAYVACGPWHTALISSTGQLF 366

Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS----------- 340
           +FG G+   LGHG++     PR + +    G+  + V+ G  H  A+             
Sbjct: 367 TFGDGTFGVLGHGDKXSISYPREVDSL--TGLRTIAVACGVWHTAAVVEVIMTQSSTSIP 424

Query: 341 SGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 400
           SG ++TWG G    LGHGD+  +  P  + +L  +   ++      T  L  +G V+  G
Sbjct: 425 SGKLFTWGDGDKNRLGHGDKEPRLKPTCVPALIDYNFHKIACGHSITIGLTTSGQVFTVG 484

Query: 401 WMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERA 460
              +G LG P        L   + D L      +++ G YH +V+T +  ++ +G     
Sbjct: 485 SSVYGQLGNPHADGKQPCL---VEDKLLGESAEEVACGAYHVMVLTSKNEVYTWGKGANG 541

Query: 461 QLGHDTLRGCLEPT 474
           +LGH  +     PT
Sbjct: 542 RLGHGDVEDRKSPT 555



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 82/281 (29%), Positives = 127/281 (45%), Gaps = 19/281 (6%)

Query: 116 ITTGRYHTLLIS-NSSVFSCGSSL--CGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +  G +HT  ++ +  +++ G  +   G+LG+G + +  +            V  V+   
Sbjct: 294 VACGEFHTCAVTMDGELYTWGDGVHNAGLLGNGTDVSHWMPKRISGILEGLQVAYVACGP 353

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            H A +  +GQ+FT GD +    GH D    I  PR V++L G+    V  G+  T  + 
Sbjct: 354 WHTALISSTGQLFTFGDGTFGVLGHGD-KXSISYPREVDSLTGLRTIAVACGVWHTAAVV 412

Query: 233 -----------IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 281
                        G + T G     +LGHGD   R  P  +  L +  +  +IA G S  
Sbjct: 413 EVIMTQSSTSIPSGKLFTWGDGDKNRLGHGDKEPRLKPTCVPALIDY-NFHKIACGHSIT 471

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 341
           + +T +G V++ GS     LG+    D  QP  ++  +  G     V+ G  HV+ L S 
Sbjct: 472 IGLTTSGQVFTVGSSVYGQLGN-PHADGKQPCLVED-KLLGESAEEVACGAYHVMVLTSK 529

Query: 342 GYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK-SHLAVQVC 381
             VYTWGKG  G LGHGD  D+  P  + SLK  H+ +  C
Sbjct: 530 NEVYTWGKGANGRLGHGDVEDRKSPTLVESLKDKHVKIIAC 570



 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 72/238 (30%), Positives = 116/238 (48%), Gaps = 23/238 (9%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSASEN 173
           +  G +HT LIS++  +F+ G    GVLGHG + +  +S+ R ++  +    + V+    
Sbjct: 349 VACGPWHTALISSTGQLFTFGDGTFGVLGHGDKXS--ISYPREVDSLTGLRTIAVACGVW 406

Query: 174 HAAFVLQ-----------SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 222
           H A V++           SG++FT GD      GH D   P  +P  V AL      ++ 
Sbjct: 407 HTAAVVEVIMTQSSTSIPSGKLFTWGDGDKNRLGHGD-KEPRLKPTCVPALIDYNFHKIA 465

Query: 223 AGLNFTGFLTIRGHVHTCGSNTHGQLG--HGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 280
            G + T  LT  G V T GS+ +GQLG  H D   +P       L E  S  ++A G  +
Sbjct: 466 CGHSITIGLTTSGQVFTVGSSVYGQLGNPHADG-KQPCLVEDKLLGE--SAEEVACGAYH 522

Query: 281 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
           ++ +T    VY++G G+N  LGHG+  D   P  +++ + K  HV  ++ G  +  A+
Sbjct: 523 VMVLTSKNEVYTWGKGANGRLGHGDVEDRKSPTLVESLKDK--HVKIIACGSNYSAAI 578



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 73/275 (26%), Positives = 127/275 (46%), Gaps = 21/275 (7%)

Query: 225 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 284
           +  +  +T +G V T G  T G+LG G   D   P+ +  L    +V  +A G  +  AV
Sbjct: 246 IRHSAIVTRQGEVFTWGEETGGRLGLGMGKDVTQPRLVEALAAT-TVDLVACGEFHTCAV 304

Query: 285 TGNGVVYSFGSGSNFC--LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
           T +G +Y++G G +    LG+G       P+ I     +G+ V  V+ G  H   + S+G
Sbjct: 305 TMDGELYTWGDGVHNAGLLGNGTDVSHWMPKRISGIL-EGLQVAYVACGPWHTALISSTG 363

Query: 343 YVYTWGKGYCGALGHGDEIDKTLPEPLSSLKS-----------HLAVQVCARKRKTFVLV 391
            ++T+G G  G LGHGD+   + P  + SL             H A  V     ++   +
Sbjct: 364 QLFTFGDGTFGVLGHGDKXSISYPREVDSLTGLRTIAVACGVWHTAAVVEVIMTQSSTSI 423

Query: 392 DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRL 451
            +G ++ +G      LG  D+   +  L+P  + +L  ++  +I+ G   T+ +T  G++
Sbjct: 424 PSGKLFTWGDGDKNRLGHGDK---EPRLKPTCVPALIDYNFHKIACGHSITIGLTTSGQV 480

Query: 452 FGFGDNERAQLGH---DTLRGCLEPTEIFIQEMEE 483
           F  G +   QLG+   D  + CL   ++  +  EE
Sbjct: 481 FTVGSSVYGQLGNPHADGKQPCLVEDKLLGESAEE 515


>gi|282722850|gb|ADA84471.1| retinitis pigmentosa GTPase regulator protein 1 [Danio rerio]
          Length = 1697

 Score =  119 bits (297), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 91/304 (29%), Positives = 144/304 (47%), Gaps = 18/304 (5%)

Query: 166 VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 225
           V +S  ++H+AFV + G++F  GDN+    G +    P+ +P  V+ LKG   + V  G 
Sbjct: 37  VHISCGQSHSAFVTEQGRLFVFGDNNRGQLGLQ-IKGPVTKPVCVKVLKGERAQSVACGT 95

Query: 226 NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 285
           + T   T +G +   G N+ GQLG G   D  + + + P  +   +  ++AG     A+T
Sbjct: 96  DHTLVSTSQGEILAAGGNSDGQLGLGHCNDSISFQRLRPFCDYAPIKLLSAGDHTSAALT 155

Query: 286 GNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVY 345
            +G ++ +G  S   LG G     L P+ +      G  +  VS G  H   +  SG VY
Sbjct: 156 EDGRLFLWGDNSAGQLGFGNDSHALLPQELNM----GQSIHWVSCGYRHSALVTDSGDVY 211

Query: 346 TWGKGYCGALGHGDE--IDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYG---FG 400
           T+G+   G LG       + + P+ + SL+S L V  C  K    +  D    +G   FG
Sbjct: 212 TFGESADGRLGLSAHQLANHSYPQRVESLRSVLQV-ACGGKHTLALTEDELYCFGGGEFG 270

Query: 401 WMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERA 460
            +G G L F    V+D    P  +   R   V+ ++ G  H+ ++TD G L+ FGD    
Sbjct: 271 QLGLGMLVF----VADS---PVAVGHFRKDRVTHVTCGEQHSALITDSGLLYTFGDGRHG 323

Query: 461 QLGH 464
           +LGH
Sbjct: 324 KLGH 327



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 76/250 (30%), Positives = 121/250 (48%), Gaps = 15/250 (6%)

Query: 116 ITTGRYHTLL-ISNSSVFSCGSSLCGVLGHGPETTQCVSFTRIN-FPSAAHVVQVSASEN 173
           +  G  HTL+  S   + + G +  G LG G      +SF R+  F   A +  +SA ++
Sbjct: 91  VACGTDHTLVSTSQGEILAAGGNSDGQLGLG-HCNDSISFQRLRPFCDYAPIKLLSAGDH 149

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
            +A + + G++F  GDNS+   G  + +  +  P+  E   G     V+ G   +  +T 
Sbjct: 150 TSAALTEDGRLFLWGDNSAGQLGFGNDSHALL-PQ--ELNMGQSIHWVSCGYRHSALVTD 206

Query: 234 RGHVHTCGSNTHGQLGHG--DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
            G V+T G +  G+LG       +   P+ +   E + SV+Q+A G  + LA+T + + Y
Sbjct: 207 SGDVYTFGESADGRLGLSAHQLANHSYPQRV---ESLRSVLQVACGGKHTLALTEDEL-Y 262

Query: 292 SFGSGSNFCLGHGEQ-HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKG 350
            FG G    LG G        P A+  FR+    V  V+ G++H   +  SG +YT+G G
Sbjct: 263 CFGGGEFGQLGLGMLVFVADSPVAVGHFRKD--RVTHVTCGEQHSALITDSGLLYTFGDG 320

Query: 351 YCGALGHGDE 360
             G LGHGDE
Sbjct: 321 RHGKLGHGDE 330



 Score = 56.6 bits (135), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 59/220 (26%), Positives = 99/220 (45%), Gaps = 17/220 (7%)

Query: 125 LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQV 184
           L  +  +F  G +  G LG G ++   +    +N   + H   VS    H+A V  SG V
Sbjct: 154 LTEDGRLFLWGDNSAGQLGFGNDSHALLP-QELNMGQSIH--WVSCGYRHSALVTDSGDV 210

Query: 185 FTCGDNSSFCCG---HRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCG 241
           +T G+++    G   H+  N     P+ VE+L+ V   QV  G   T  LT    ++  G
Sbjct: 211 YTFGESADGRLGLSAHQLANHSY--PQRVESLRSV--LQVACGGKHTLALT-EDELYCFG 265

Query: 242 SNTHGQLGHGD-TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 300
               GQLG G       +P ++    +   V  +  G  +   +T +G++Y+FG G +  
Sbjct: 266 GGEFGQLGLGMLVFVADSPVAVGHFRK-DRVTHVTCGEQHSALITDSGLLYTFGDGRHGK 324

Query: 301 LGHGEQH--DELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
           LGHG+++  ++  P   Q F      V+ V+ G  H++  
Sbjct: 325 LGHGDENFTNQFTPTVCQRFFEYS--VMTVACGSSHMLVF 362



 Score = 45.8 bits (107), Expect = 0.043,   Method: Composition-based stats.
 Identities = 40/151 (26%), Positives = 59/151 (39%), Gaps = 2/151 (1%)

Query: 326 VRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKR 385
           V +S G  H   +   G ++ +G    G LG   +   T P  +  LK   A  V     
Sbjct: 37  VHISCGQSHSAFVTEQGRLFVFGDNNRGQLGLQIKGPVTKPVCVKVLKGERAQSVACGTD 96

Query: 386 KTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVV 445
            T V    G +   G    G LG      +D +   R+        +  +S G + +  +
Sbjct: 97  HTLVSTSQGEILAAGGNSDGQLGLGH--CNDSISFQRLRPFCDYAPIKLLSAGDHTSAAL 154

Query: 446 TDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 476
           T+ GRLF +GDN   QLG       L P E+
Sbjct: 155 TEDGRLFLWGDNSAGQLGFGNDSHALLPQEL 185


>gi|60097906|ref|NP_080268.1| E3 ISG15--protein ligase Herc6 [Mus musculus]
 gi|403399416|sp|F2Z461.1|HERC6_MOUSE RecName: Full=E3 ISG15--protein ligase Herc6
          Length = 1003

 Score =  119 bits (297), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 81/260 (31%), Positives = 133/260 (51%), Gaps = 6/260 (2%)

Query: 206 RPRLVEA-LKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP 264
           +PR ++A   G+   Q  +G + +  L     V++CG N+ GQLG         P+ I  
Sbjct: 11  KPRRLKAGTSGIELLQAASGEHHSLLLFSNHRVYSCGDNSWGQLGQRRDQSTERPEPIQA 70

Query: 265 LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGE-QHDELQPRAIQTFRRKGI 323
           L ++  V  ++ G  + +AV   G V+++G+GS   LG GE +     P  I+     GI
Sbjct: 71  LNDL-HVDLVSCGKEHSVAVCHKGKVFAWGAGSEGQLGIGEFKEISFMPTKIKAL--AGI 127

Query: 324 HVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG-DEIDKTLPEPLSSLKSHLAVQVCA 382
            +++VS G  H +AL   G+V++WG+   G LG G +   + +P+ + SL+     QV A
Sbjct: 128 KIIQVSCGHYHSLALSEDGHVFSWGRNSEGQLGLGKNSRSQAIPQKVKSLEGIPLAQVAA 187

Query: 383 RKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHT 442
               +F L  TG+ +G+G    G L      V +++ +P  + +L+   V  IS G  HT
Sbjct: 188 GGTHSFALSLTGTSFGWGSNRSGQLALSGNKVKEQIYKPHSIGALKNLSVIYISCGYEHT 247

Query: 443 VVVTDRGRLFGFGDNERAQL 462
            V+T+ G++F FG N   QL
Sbjct: 248 AVLTEEGQVFTFGGNSSGQL 267



 Score = 96.3 bits (238), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 86/301 (28%), Positives = 137/301 (45%), Gaps = 27/301 (8%)

Query: 114 MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHV 165
           +Q  +G +H+LL+ SN  V+SCG +  G LG         PE  Q ++          HV
Sbjct: 25  LQAASGEHHSLLLFSNHRVYSCGDNSWGQLGQRRDQSTERPEPIQALN--------DLHV 76

Query: 166 VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 225
             VS  + H+  V   G+VF  G  S    G  +     F P  ++AL G+   QV+ G 
Sbjct: 77  DLVSCGKEHSVAVCHKGKVFAWGAGSEGQLGIGEFKEISFMPTKIKALAGIKIIQVSCGH 136

Query: 226 NFTGFLTIRGHVHTCGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 284
             +  L+  GHV + G N+ GQLG G ++  +  P+ +  LE +  + Q+AAG ++  A+
Sbjct: 137 YHSLALSEDGHVFSWGRNSEGQLGLGKNSRSQAIPQKVKSLEGI-PLAQVAAGGTHSFAL 195

Query: 285 TGNGVVYSFGSGSN----FCLGHGEQHDEL-QPRAIQTFRRKGIHVVRVSAGDEHVVALD 339
           +  G   SFG GSN      L   +  +++ +P +I     K + V+ +S G EH   L 
Sbjct: 196 SLTGT--SFGWGSNRSGQLALSGNKVKEQIYKPHSIGAL--KNLSVIYISCGYEHTAVLT 251

Query: 340 SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGF 399
             G V+T+G    G L       +  P+ +  +   ++   CA       +  TG V   
Sbjct: 252 EEGQVFTFGGNSSGQLQPSPRSGQRGPQLIEGIGGRVSQIECASYHTIAYVYTTGQVVSL 311

Query: 400 G 400
           G
Sbjct: 312 G 312



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 80/301 (26%), Positives = 148/301 (49%), Gaps = 14/301 (4%)

Query: 161 SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQ 220
           S   ++Q ++ E+H+  +  + +V++CGDNS    G R  ++   RP  ++AL  +    
Sbjct: 20  SGIELLQAASGEHHSLLLFSNHRVYSCGDNSWGQLGQR-RDQSTERPEPIQALNDLHVDL 78

Query: 221 VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRP-TPKSIAPLEEVGSVVQIAAGPS 279
           V+ G   +  +  +G V   G+ + GQLG G+  +    P  I  L  +  ++Q++ G  
Sbjct: 79  VSCGKEHSVAVCHKGKVFAWGAGSEGQLGIGEFKEISFMPTKIKALAGI-KIIQVSCGHY 137

Query: 280 YMLAVTGNGVVYSFGSGSNFCLGHGEQ-HDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
           + LA++ +G V+S+G  S   LG G+    +  P+ +++   +GI + +V+AG  H  AL
Sbjct: 138 HSLALSEDGHVFSWGRNSEGQLGLGKNSRSQAIPQKVKSL--EGIPLAQVAAGGTHSFAL 195

Query: 339 DSSGYVYTWGKGYCGALG-HGDEIDKTLPEP--LSSLKSHLAVQVCARKRKTFVLVDTGS 395
             +G  + WG    G L   G+++ + + +P  + +LK+   + +      T VL + G 
Sbjct: 196 SLTGTSFGWGSNRSGQLALSGNKVKEQIYKPHSIGALKNLSVIYISCGYEHTAVLTEEGQ 255

Query: 396 VYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV-VTDRGRLFGF 454
           V+ FG    G L    R        P++++ +    VSQI    YHT+  V   G++   
Sbjct: 256 VFTFGGNSSGQLQPSPRSGQRG---PQLIEGI-GGRVSQIECASYHTIAYVYTTGQVVSL 311

Query: 455 G 455
           G
Sbjct: 312 G 312



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 39/143 (27%), Positives = 70/143 (48%), Gaps = 4/143 (2%)

Query: 322 GIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKS-HLAVQV 380
           GI +++ ++G+ H + L S+  VY+ G    G LG   +     PEP+ +L   H+ +  
Sbjct: 21  GIELLQAASGEHHSLLLFSNHRVYSCGDNSWGQLGQRRDQSTERPEPIQALNDLHVDLVS 80

Query: 381 CARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLY 440
           C  K  +  +   G V+ +G    G LG  +    +    P  + +L    + Q+S G Y
Sbjct: 81  CG-KEHSVAVCHKGKVFAWGAGSEGQLGIGE--FKEISFMPTKIKALAGIKIIQVSCGHY 137

Query: 441 HTVVVTDRGRLFGFGDNERAQLG 463
           H++ +++ G +F +G N   QLG
Sbjct: 138 HSLALSEDGHVFSWGRNSEGQLG 160


>gi|332233498|ref|XP_003265939.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 isoform 2
           [Nomascus leucogenys]
          Length = 984

 Score =  119 bits (297), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 91/276 (32%), Positives = 131/276 (47%), Gaps = 12/276 (4%)

Query: 193 FCCG--HRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGH 250
           FC G   R+  R     R  E   G    Q  +G   +  L     V +CG N+ GQLG 
Sbjct: 3   FCWGADSRELQR-----RRTEGSPGAELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGR 57

Query: 251 GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHD-E 309
                   P+ I  LE + +V  ++ G  + LAV   G V+++G+GS   LG GE  +  
Sbjct: 58  RGAPRGELPEPIQALETL-NVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGELKEIS 116

Query: 310 LQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEI-DKTLPEP 368
             P+ I T    GI +++VS G  H +AL     V++WGK   G LG G E   +  P+ 
Sbjct: 117 FTPKKITTL--NGIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEFPSQASPQR 174

Query: 369 LSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLR 428
           + SL+     QV A    +F L   G+ +G+G    G L    R V  +  +P  + +L+
Sbjct: 175 VRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSVGALK 234

Query: 429 AHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 464
              V  IS G  HT V+T  G++F FGDN   QLG+
Sbjct: 235 NLGVVYISCGAEHTAVLTQDGKVFTFGDNRSGQLGY 270



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 88/302 (29%), Positives = 147/302 (48%), Gaps = 20/302 (6%)

Query: 163 AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 222
           A ++Q ++ E H+  +L + +V +CGDNS    G R   R    P  ++AL+ +    V+
Sbjct: 23  AELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAPRGEL-PEPIQALETLNVDLVS 81

Query: 223 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRP-TPKSIAPLEEVGSVVQIAAGPSYM 281
            G   +  +  +G V   G+ + GQLG G+  +   TPK I  L  +  ++Q++ G  + 
Sbjct: 82  CGKEHSLAVCHKGRVFAWGAGSEGQLGIGELKEISFTPKKITTLNGI-KIIQVSCGHYHS 140

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQH-DELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 340
           LA++ +  V+S+G  S+  LG G++   +  P+ +++   +GI + +V+AG  H  AL  
Sbjct: 141 LALSKDSQVFSWGKNSHGQLGLGKEFPSQASPQRVRSL--EGIPLAQVAAGGAHSFALSL 198

Query: 341 SGYVYTWGKGYCGAL---GHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVY 397
            G  + WG    G L   G    +    P  + +LK+   V +      T VL   G V+
Sbjct: 199 CGTSFGWGSNSAGQLALSGRNVPVQSNKPLSVGALKNLGVVYISCGAEHTAVLTQDGKVF 258

Query: 398 GFGWMGFGSLGF---PDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV-VTDRGRLFG 453
            FG    G LG+   P++     V    I+D L    VSQ+  G YHT+  V   G++  
Sbjct: 259 TFGDNRSGQLGYSPTPEKRGPQLV---EIIDGL----VSQVDCGSYHTLAYVHTTGQVVS 311

Query: 454 FG 455
           FG
Sbjct: 312 FG 313



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 85/298 (28%), Positives = 132/298 (44%), Gaps = 21/298 (7%)

Query: 114 MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHV 165
           +Q  +G  H+LL+ +N  V SCG +  G LG         PE  Q +    ++       
Sbjct: 26  LQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAPRGELPEPIQALETLNVDL------ 79

Query: 166 VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 225
             VS  + H+  V   G+VF  G  S    G  +     F P+ +  L G+   QV+ G 
Sbjct: 80  --VSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGELKEISFTPKKITTLNGIKIIQVSCGH 137

Query: 226 NFTGFLTIRGHVHTCGSNTHGQLGHGDTL-DRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 284
             +  L+    V + G N+HGQLG G     + +P+ +  LE +  + Q+AAG ++  A+
Sbjct: 138 YHSLALSKDSQVFSWGKNSHGQLGLGKEFPSQASPQRVRSLEGI-PLAQVAAGGAHSFAL 196

Query: 285 TGNGVVYSFGSGSNFCLGHGEQHDELQP-RAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 343
           +  G  + +GS S   L    ++  +Q  + +     K + VV +S G EH   L   G 
Sbjct: 197 SLCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSVGALKNLGVVYISCGAEHTAVLTQDGK 256

Query: 344 VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV-DTGSVYGFG 400
           V+T+G    G LG+    +K  P+ L  +   L  QV      T   V  TG V  FG
Sbjct: 257 VFTFGDNRSGQLGYSPTPEKRGPQ-LVEIIDGLVSQVDCGSYHTLAYVHTTGQVVSFG 313


>gi|297811737|ref|XP_002873752.1| regulator of chromosome condensation family protein [Arabidopsis
           lyrata subsp. lyrata]
 gi|297319589|gb|EFH50011.1| regulator of chromosome condensation family protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 396

 Score =  119 bits (297), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 108/369 (29%), Positives = 161/369 (43%), Gaps = 34/369 (9%)

Query: 125 LISNSSVFSCGSSLCGVLGHG-PETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQ 183
           + S +SV + GS   G LG G  E  +  S      P     V V  S N  A +   G+
Sbjct: 1   MASATSVIAWGSGEDGQLGLGTDEEKELASVVEALEPFNVRSV-VGGSRNSLA-ICDDGK 58

Query: 184 VFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 243
           +FT G N     GH    +    P LV++L  V   Q   G      +  +G  +  G N
Sbjct: 59  LFTWGWNQRGTLGHPPETKTESTPSLVKSLASVKIVQAAIGGWHCLAVDDQGRAYAWGGN 118

Query: 244 THGQLGHGDTLD---RPT------PKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 294
            +GQ G   + D   RP       PK  AP     +V Q+AAG ++ + +T  G V+++G
Sbjct: 119 EYGQCGEEPSKDETGRPVRRDIVIPKRCAPQL---TVRQVAAGGTHSVVLTREGYVWTWG 175

Query: 295 SGSNFCLGHGEQHDELQPRAIQTF----RRKGIHVVR-VSAGDEHVVALDSSGYVYTWGK 349
                            P  I+      R +G+  VR ++ G  H +AL   G ++ WG 
Sbjct: 176 Q-------------PWPPGDIKQISIPVRVQGLENVRLIAVGAFHNLALKEDGTLWAWGN 222

Query: 350 GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGF 409
              G LG GD   ++ P P+  L     V + A    +  L + G VYG+G    G LGF
Sbjct: 223 NEYGQLGTGDTQPRSFPIPVQGLDDLTLVDIAAGGWHSTALTNEGEVYGWGRGEHGRLGF 282

Query: 410 PDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG 469
            D   S K+L P+ ++ L    + Q+S G  H+V +T  GR+F FG  +  +LG+     
Sbjct: 283 GDNDKSSKML-PQKVNLLAGEDIIQVSCGGTHSVALTRDGRIFSFGRGDHGRLGYGRKVT 341

Query: 470 CLEPTEIFI 478
             +P E+ I
Sbjct: 342 TGQPLELPI 350


>gi|332233496|ref|XP_003265938.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 isoform 1
           [Nomascus leucogenys]
          Length = 1020

 Score =  119 bits (297), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 91/276 (32%), Positives = 131/276 (47%), Gaps = 12/276 (4%)

Query: 193 FCCG--HRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGH 250
           FC G   R+  R     R  E   G    Q  +G   +  L     V +CG N+ GQLG 
Sbjct: 3   FCWGADSRELQR-----RRTEGSPGAELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGR 57

Query: 251 GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHD-E 309
                   P+ I  LE + +V  ++ G  + LAV   G V+++G+GS   LG GE  +  
Sbjct: 58  RGAPRGELPEPIQALETL-NVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGELKEIS 116

Query: 310 LQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEI-DKTLPEP 368
             P+ I T    GI +++VS G  H +AL     V++WGK   G LG G E   +  P+ 
Sbjct: 117 FTPKKITTL--NGIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEFPSQASPQR 174

Query: 369 LSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLR 428
           + SL+     QV A    +F L   G+ +G+G    G L    R V  +  +P  + +L+
Sbjct: 175 VRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSVGALK 234

Query: 429 AHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 464
              V  IS G  HT V+T  G++F FGDN   QLG+
Sbjct: 235 NLGVVYISCGAEHTAVLTQDGKVFTFGDNRSGQLGY 270



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 88/302 (29%), Positives = 147/302 (48%), Gaps = 20/302 (6%)

Query: 163 AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 222
           A ++Q ++ E H+  +L + +V +CGDNS    G R   R    P  ++AL+ +    V+
Sbjct: 23  AELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAPRGEL-PEPIQALETLNVDLVS 81

Query: 223 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRP-TPKSIAPLEEVGSVVQIAAGPSYM 281
            G   +  +  +G V   G+ + GQLG G+  +   TPK I  L  +  ++Q++ G  + 
Sbjct: 82  CGKEHSLAVCHKGRVFAWGAGSEGQLGIGELKEISFTPKKITTLNGI-KIIQVSCGHYHS 140

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQH-DELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 340
           LA++ +  V+S+G  S+  LG G++   +  P+ +++   +GI + +V+AG  H  AL  
Sbjct: 141 LALSKDSQVFSWGKNSHGQLGLGKEFPSQASPQRVRSL--EGIPLAQVAAGGAHSFALSL 198

Query: 341 SGYVYTWGKGYCGAL---GHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVY 397
            G  + WG    G L   G    +    P  + +LK+   V +      T VL   G V+
Sbjct: 199 CGTSFGWGSNSAGQLALSGRNVPVQSNKPLSVGALKNLGVVYISCGAEHTAVLTQDGKVF 258

Query: 398 GFGWMGFGSLGF---PDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV-VTDRGRLFG 453
            FG    G LG+   P++     V    I+D L    VSQ+  G YHT+  V   G++  
Sbjct: 259 TFGDNRSGQLGYSPTPEKRGPQLV---EIIDGL----VSQVDCGSYHTLAYVHTTGQVVS 311

Query: 454 FG 455
           FG
Sbjct: 312 FG 313



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 85/298 (28%), Positives = 132/298 (44%), Gaps = 21/298 (7%)

Query: 114 MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHV 165
           +Q  +G  H+LL+ +N  V SCG +  G LG         PE  Q +    ++       
Sbjct: 26  LQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAPRGELPEPIQALETLNVDL------ 79

Query: 166 VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 225
             VS  + H+  V   G+VF  G  S    G  +     F P+ +  L G+   QV+ G 
Sbjct: 80  --VSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGELKEISFTPKKITTLNGIKIIQVSCGH 137

Query: 226 NFTGFLTIRGHVHTCGSNTHGQLGHGDTL-DRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 284
             +  L+    V + G N+HGQLG G     + +P+ +  LE +  + Q+AAG ++  A+
Sbjct: 138 YHSLALSKDSQVFSWGKNSHGQLGLGKEFPSQASPQRVRSLEGI-PLAQVAAGGAHSFAL 196

Query: 285 TGNGVVYSFGSGSNFCLGHGEQHDELQP-RAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 343
           +  G  + +GS S   L    ++  +Q  + +     K + VV +S G EH   L   G 
Sbjct: 197 SLCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSVGALKNLGVVYISCGAEHTAVLTQDGK 256

Query: 344 VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV-DTGSVYGFG 400
           V+T+G    G LG+    +K  P+ L  +   L  QV      T   V  TG V  FG
Sbjct: 257 VFTFGDNRSGQLGYSPTPEKRGPQ-LVEIIDGLVSQVDCGSYHTLAYVHTTGQVVSFG 313


>gi|47219890|emb|CAF97160.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 4588

 Score =  118 bits (296), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 91/321 (28%), Positives = 147/321 (45%), Gaps = 11/321 (3%)

Query: 160  PSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCK 219
            P  +   QV   +N +  +  +G V   G+      G  +++  +F P ++ A +G    
Sbjct: 3708 PCLSQTQQVVCGQNCSFLIQSNGAVMAVGEGQYGRLGQGNSDD-LFVPTIISAFQGYVVT 3766

Query: 220  QVTAGLNFTGF---LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA 276
            Q+       G    LT  G V + G    G+LGHG+   +  PK I  L+    VVQ+A 
Sbjct: 3767 QLVTSCGSDGHSMALTETGEVFSWGDGDFGKLGHGNNERQRRPKQIEALQG-EDVVQLAC 3825

Query: 277  GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVV 336
            G  +   VT +G +++FGSG +  LG     +++QP  +     +G HV +VS G  H +
Sbjct: 3826 GFRHSAVVTADGKLFTFGSGESGRLGQRSTSNKMQPERVAAL--EGYHVGQVSCGLNHTL 3883

Query: 337  ALDSSGY-VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGS 395
             L   G  V+ +G G  G LG G    K  P+ +  L +    +VC   + + VL   G 
Sbjct: 3884 VLSLDGMAVWAFGDGDYGKLGAGSSTAKYYPQKVEQLCNKGMKKVCCGAQFSVVLATDGH 3943

Query: 396  VYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFG 455
            VY FG      +G PD  + ++   P+++ SL    +  I+ G  H + ++  G ++ +G
Sbjct: 3944 VYTFGQERL--IGLPDSMLKNRS-NPQVVPSLEGLFIEDIAVGCEHVLALSSTGDIYAWG 4000

Query: 456  DNERAQLGHDTLRGCLEPTEI 476
             N   QLG        EPT I
Sbjct: 4001 CNSEGQLGLGHCNLVKEPTLI 4021



 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 98/342 (28%), Positives = 150/342 (43%), Gaps = 18/342 (5%)

Query: 116 ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFP--SAAHVVQVSASE 172
           I  G+Y T  +S + SV +CG    G LG G    Q +    +  P  +   V     S+
Sbjct: 374 IEAGQYCTFSVSTDGSVKACGKGSYGRLGLGDSNNQSMPKKLVLEPHRNIKKVFSSKGSD 433

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVE-ALKGVPCKQVTAGLNFTGFL 231
            H   +   G+VF+ GD      GH ++    + P++V+  L        +AG   +  +
Sbjct: 434 GHTLAITVDGEVFSWGDGEYGKLGHGNSATQKY-PKIVQGPLFSKIVVSASAGYRHSAAV 492

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG-VV 290
           T  G ++T G    G+LGH D+  R TP  +  +  VG   Q+A G S+ +AV  +G  +
Sbjct: 493 TNDGELYTWGEGDFGRLGHSDSQSRNTPTLVKDISGVG---QVACGSSHTIAVAQDGRTM 549

Query: 291 YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKG 350
           +SFG G N  LGHG+ +   +P+ I+     G  + +V AG +  +AL S+G V+ WG G
Sbjct: 550 WSFGGGDNGKLGHGDTNRVYRPKVIEALH--GFIIRKVCAGSQSSLALTSAGQVFAWGCG 607

Query: 351 YCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFP 410
            C   G   E     P  +  L     + +         L     VY +G    G  G  
Sbjct: 608 SCLGCG-SSETTSLRPRFVEDLSITKIIDISCGDSHCLALSHENEVYAWGNNTMGQCG-- 664

Query: 411 DRGVSDKVLRPRILDSLRAHHVSQISTGLYH----TVVVTDR 448
               S  + RP+ +  L    + QI+ G  H    T V TDR
Sbjct: 665 QGHTSTPITRPKKVLGLEGVSIQQITAGTSHSLAWTAVPTDR 706



 Score =  109 bits (272), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 92/336 (27%), Positives = 156/336 (46%), Gaps = 11/336 (3%)

Query: 115  QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPS--AAHVVQVSAS 171
            Q+  G+  + LI SN +V + G    G LG G      V      F       +V    S
Sbjct: 3715 QVVCGQNCSFLIQSNGAVMAVGEGQYGRLGQGNSDDLFVPTIISAFQGYVVTQLVTSCGS 3774

Query: 172  ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
            + H+  + ++G+VF+ GD      GH +  R   RP+ +EAL+G    Q+  G   +  +
Sbjct: 3775 DGHSMALTETGEVFSWGDGDFGKLGHGNNERQ-RRPKQIEALQGEDVVQLACGFRHSAVV 3833

Query: 232  TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV-V 290
            T  G + T GS   G+LG   T ++  P+ +A LE    V Q++ G ++ L ++ +G+ V
Sbjct: 3834 TADGKLFTFGSGESGRLGQRSTSNKMQPERVAALEGY-HVGQVSCGLNHTLVLSLDGMAV 3892

Query: 291  YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKG 350
            ++FG G    LG G    +  P+ ++    KG+   +V  G +  V L + G+VYT+G+ 
Sbjct: 3893 WAFGDGDYGKLGAGSSTAKYYPQKVEQLCNKGMK--KVCCGAQFSVVLATDGHVYTFGQE 3950

Query: 351  YCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFP 410
                L      +++ P+ + SL+      +         L  TG +Y +G    G LG  
Sbjct: 3951 RLIGLPDSMLKNRSNPQVVPSLEGLFIEDIAVGCEHVLALSSTGDIYAWGCNSEGQLGL- 4009

Query: 411  DRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT 446
              G  + V  P ++ +L+  ++ QIS G  H+   T
Sbjct: 4010 --GHCNLVKEPTLITALQGKNIKQISAGRCHSSAWT 4043



 Score =  109 bits (272), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 78/274 (28%), Positives = 129/274 (47%), Gaps = 10/274 (3%)

Query: 184 VFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 243
           V+  G NSS       T   I  P+L +       + + AG   T  ++  G V  CG  
Sbjct: 340 VYVWGSNSSHQLAE-GTLEKILLPKLTQGFSDA--QTIEAGQYCTFSVSTDGSVKACGKG 396

Query: 244 THGQLGHGDTLDRPTPKSIA--PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCL 301
           ++G+LG GD+ ++  PK +   P   +  V        + LA+T +G V+S+G G    L
Sbjct: 397 SYGRLGLGDSNNQSMPKKLVLEPHRNIKKVFSSKGSDGHTLAITVDGEVFSWGDGEYGKL 456

Query: 302 GHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEI 361
           GHG    +  P+ +Q      I VV  SAG  H  A+ + G +YTWG+G  G LGH D  
Sbjct: 457 GHGNSATQKYPKIVQGPLFSKI-VVSASAGYRHSAAVTNDGELYTWGEGDFGRLGHSDSQ 515

Query: 362 DKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRP 421
            +  P  +  + S +    C       V  D  +++ FG    G LG    G +++V RP
Sbjct: 516 SRNTPTLVKDI-SGVGQVACGSSHTIAVAQDGRTMWSFGGGDNGKLG---HGDTNRVYRP 571

Query: 422 RILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFG 455
           +++++L    + ++  G   ++ +T  G++F +G
Sbjct: 572 KVIEALHGFIIRKVCAGSQSSLALTSAGQVFAWG 605



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 74/233 (31%), Positives = 116/233 (49%), Gaps = 11/233 (4%)

Query: 234  RGHVHTCGSNTHGQL-GHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
            +  V+  G+  +GQL G G  L  PT   +AP   +    Q+  G +    +  NG V +
Sbjct: 3680 KSDVYLWGNGRYGQLAGTGTNLTLPT---LAPC--LSQTQQVVCGQNCSFLIQSNGAVMA 3734

Query: 293  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG-DEHVVALDSSGYVYTWGKGY 351
             G G    LG G   D   P  I  F+   +  +  S G D H +AL  +G V++WG G 
Sbjct: 3735 VGEGQYGRLGQGNSDDLFVPTIISAFQGYVVTQLVTSCGSDGHSMALTETGEVFSWGDGD 3794

Query: 352  CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 411
             G LGHG+   +  P+ + +L+    VQ+    R + V+   G ++ FG    G LG   
Sbjct: 3795 FGKLGHGNNERQRRPKQIEALQGEDVVQLACGFRHSAVVTADGKLFTFGSGESGRLG--Q 3852

Query: 412  RGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT-DRGRLFGFGDNERAQLG 463
            R  S+K ++P  + +L  +HV Q+S GL HT+V++ D   ++ FGD +  +LG
Sbjct: 3853 RSTSNK-MQPERVAALEGYHVGQVSCGLNHTLVLSLDGMAVWAFGDGDYGKLG 3904



 Score = 95.1 bits (235), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 79/291 (27%), Positives = 130/291 (44%), Gaps = 21/291 (7%)

Query: 182 GQVFTCGDNSSFCCGHRDTNRPIFRPRLV----EALKGVPCKQVTAGLNFTGFLTIRGHV 237
           G V  CG  S    G  D+N      +LV      +K V   + + G   T  +T+ G V
Sbjct: 388 GSVKACGKGSYGRLGLGDSNNQSMPKKLVLEPHRNIKKVFSSKGSDG--HTLAITVDGEV 445

Query: 238 HTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 297
            + G   +G+LGHG++  +  PK +        VV  +AG  +  AVT +G +Y++G G 
Sbjct: 446 FSWGDGEYGKLGHGNSATQKYPKIVQGPLFSKIVVSASAGYRHSAAVTNDGELYTWGEGD 505

Query: 298 NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG-YVYTWGKGYCGALG 356
              LGH +      P  ++     G    +V+ G  H +A+   G  ++++G G  G LG
Sbjct: 506 FGRLGHSDSQSRNTPTLVKDISGVG----QVACGSSHTIAVAQDGRTMWSFGGGDNGKLG 561

Query: 357 HGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGW---MGFGSLGFPDRG 413
           HGD      P+ + +L   +  +VCA  + +  L   G V+ +G    +G GS       
Sbjct: 562 HGDTNRVYRPKVIEALHGFIIRKVCAGSQSSLALTSAGQVFAWGCGSCLGCGS------- 614

Query: 414 VSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 464
                LRPR ++ L    +  IS G  H + ++    ++ +G+N   Q G 
Sbjct: 615 SETTSLRPRFVEDLSITKIIDISCGDSHCLALSHENEVYAWGNNTMGQCGQ 665



 Score = 62.8 bits (151), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 94/364 (25%), Positives = 146/364 (40%), Gaps = 51/364 (14%)

Query: 81  ELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLISNS--SVFSCGSSL 138
           EL     G++ R+        ++  +V+  +G  Q+  G  HT+ ++    +++S G   
Sbjct: 497 ELYTWGEGDFGRLGHSDSQSRNTPTLVKDISGVGQVACGSSHTIAVAQDGRTMWSFGGGD 556

Query: 139 CGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHR 198
            G LGHG +T +      I       + +V A    +  +  +GQVF  G  S   CG  
Sbjct: 557 NGKLGHG-DTNRVYRPKVIEALHGFIIRKVCAGSQSSLALTSAGQVFAWGCGSCLGCGSS 615

Query: 199 DTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPT 258
           +T     RPR VE L       ++ G +    L+    V+  G+NT GQ G G T    T
Sbjct: 616 ETTS--LRPRFVEDLSITKIIDISCGDSHCLALSHENEVYAWGNNTMGQCGQGHTSTPIT 673

Query: 259 -PKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQT 317
            PK +  LE V S+ QI AG S+ LA T                            A+ T
Sbjct: 674 RPKKVLGLEGV-SIQQITAGTSHSLAWT----------------------------AVPT 704

Query: 318 FRRKGIHVVRVSAGDEHVVALDSSGYVY--TWGKGYCGALGHGDEIDKTLPEP-LSSLKS 374
            R+       V+      V L+ S + Y   + K YC  L      D T P P LS    
Sbjct: 705 DRQ------LVAWHRPFCVDLEESTFTYLCNFLKCYCDGLE-----DDTPPTPFLSKRDH 753

Query: 375 HLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQ 434
           H  + +C +     V +      G G M  GS G P R +  +++   +  S++   ++ 
Sbjct: 754 HQFILLCMKLLS--VHLSLAHAGGTGAMVLGSQGRPLRNLLFRLIDSNMPGSIQQAVLNT 811

Query: 435 ISTG 438
           +S G
Sbjct: 812 LSIG 815



 Score = 59.3 bits (142), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 53/190 (27%), Positives = 84/190 (44%), Gaps = 13/190 (6%)

Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 349
           VY +GS S+  L  G     L P+  Q F         + AG     ++ + G V   GK
Sbjct: 340 VYVWGSNSSHQLAEGTLEKILLPKLTQGFS----DAQTIEAGQYCTFSVSTDGSVKACGK 395

Query: 350 GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKR----KTFVLVDTGSVYGFGWMGFG 405
           G  G LG GD  ++++P+ L  L+ H  ++     +     T  +   G V+ +G   +G
Sbjct: 396 GSYGRLGLGDSNNQSMPKKLV-LEPHRNIKKVFSSKGSDGHTLAITVDGEVFSWGDGEYG 454

Query: 406 SLGFPDRGVSDKVLRPRILD-SLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 464
            LG    G S     P+I+   L +  V   S G  H+  VT+ G L+ +G+ +  +LGH
Sbjct: 455 KLG---HGNSATQKYPKIVQGPLFSKIVVSASAGYRHSAAVTNDGELYTWGEGDFGRLGH 511

Query: 465 DTLRGCLEPT 474
              +    PT
Sbjct: 512 SDSQSRNTPT 521



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 44/148 (29%), Positives = 71/148 (47%), Gaps = 9/148 (6%)

Query: 344  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 403
            VY WG G  G L  G   + TLP  L+   S     VC  +  +F++   G+V   G   
Sbjct: 3683 VYLWGNGRYGQLA-GTGTNLTLPT-LAPCLSQTQQVVCG-QNCSFLIQSNGAVMAVGEGQ 3739

Query: 404  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLY---HTVVVTDRGRLFGFGDNERA 460
            +G LG   +G SD +  P I+ + + + V+Q+ T      H++ +T+ G +F +GD +  
Sbjct: 3740 YGRLG---QGNSDDLFVPTIISAFQGYVVTQLVTSCGSDGHSMALTETGEVFSWGDGDFG 3796

Query: 461  QLGHDTLRGCLEPTEIFIQEMEEDTGLA 488
            +LGH        P +I   + E+   LA
Sbjct: 3797 KLGHGNNERQRRPKQIEALQGEDVVQLA 3824


>gi|323451188|gb|EGB07066.1| hypothetical protein AURANDRAFT_71888 [Aureococcus anophagefferens]
          Length = 1060

 Score =  118 bits (296), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 96/290 (33%), Positives = 131/290 (45%), Gaps = 16/290 (5%)

Query: 184 VFTCGDNSS--FCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCG 241
           V+ CG N++    CG R++    +R R     KG     V  G +++  + + G V +CG
Sbjct: 34  VYACGYNATGQLGCGDRESRVVPWRVRTSRLGKGR-VDGVACGSSYS-VVVVAGQVASCG 91

Query: 242 SNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCL 301
            N HGQLGHG   +   P+ +  L  V  VV +AA  ++ LA+   G VYS+G G    L
Sbjct: 92  KNVHGQLGHGGRDEETAPRVVEGLRGV-RVVAVAARGAHTLALDDRGRVYSWGRGDEGQL 150

Query: 302 GHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEI 361
           GHG       PR I    R    VV V AG  H +ALD+ G VY+WG G  GALGHGD  
Sbjct: 151 GHGAFEAVPHPRRIA---RLPTSVVAVGAGRTHSLALDADGAVYSWGCGDDGALGHGDRR 207

Query: 362 DKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRP 421
            +  P  +   K+  A  V    R   V+   G++  +GW  +G  G    G     LRP
Sbjct: 208 RQLAPRAVEFFKTRPAAAVSCGSRHNAVVTADGALVTWGWAAYGQCGASAGG---DGLRP 264

Query: 422 R--ILDSLRAHHVSQISTGLYHTVVVTDRGR---LFGFGDNERAQLGHDT 466
               L           + G  HT+  T       ++ FG N   Q G  T
Sbjct: 265 AEVPLPGDGGAECVLAACGYRHTLCATRHASGDAIWAFGWNAYGQCGGST 314



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 83/241 (34%), Positives = 114/241 (47%), Gaps = 8/241 (3%)

Query: 237 VHTCGSNTHGQLGHGDTLDRPTPKSIAPLE-EVGSVVQIAAGPSYMLAVTGNGVVYSFGS 295
           V+ CG N  GQLG GD   R  P  +       G V  +A G SY + V   G V S G 
Sbjct: 34  VYACGYNATGQLGCGDRESRVVPWRVRTSRLGKGRVDGVACGSSYSVVVVA-GQVASCGK 92

Query: 296 GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGAL 355
             +  LGHG + +E  PR ++  R  G+ VV V+A   H +ALD  G VY+WG+G  G L
Sbjct: 93  NVHGQLGHGGRDEETAPRVVEGLR--GVRVVAVAARGAHTLALDDRGRVYSWGRGDEGQL 150

Query: 356 GHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVS 415
           GHG       P  ++ L + + V V A +  +  L   G+VY +G    G+LG  DR   
Sbjct: 151 GHGAFEAVPHPRRIARLPTSV-VAVGAGRTHSLALDADGAVYSWGCGDDGALGHGDR--- 206

Query: 416 DKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTE 475
            + L PR ++  +    + +S G  H  VVT  G L  +G     Q G       L P E
Sbjct: 207 RRQLAPRAVEFFKTRPAAAVSCGSRHNAVVTADGALVTWGWAAYGQCGASAGGDGLRPAE 266

Query: 476 I 476
           +
Sbjct: 267 V 267



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 85/360 (23%), Positives = 137/360 (38%), Gaps = 42/360 (11%)

Query: 116 ITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHA 175
           +  G  +++++    V SCG ++ G LGHG    +      +       VV V+A   H 
Sbjct: 72  VACGSSYSVVVVAGQVASCGKNVHGQLGHGGRDEETAPRV-VEGLRGVRVVAVAARGAHT 130

Query: 176 AFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRG 235
             +   G+V++ G       GH      +  PR +  L       V AG   +  L   G
Sbjct: 131 LALDDRGRVYSWGRGDEGQLGH-GAFEAVPHPRRIARLP-TSVVAVGAGRTHSLALDADG 188

Query: 236 HVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 295
            V++ G    G LGHGD   +  P+++    +      ++ G  +   VT +G + ++G 
Sbjct: 189 AVYSWGCGDDGALGHGDRRRQLAPRAVE-FFKTRPAAAVSCGSRHNAVVTADGALVTWGW 247

Query: 296 GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVV-----ALDSSGYVYTWGK- 349
            +    G     D L+P  +      G   V  + G  H +     A   + + + W   
Sbjct: 248 AAYGQCGASAGGDGLRPAEVPLPGDGGAECVLAACGYRHTLCATRHASGDAIWAFGWNAY 307

Query: 350 GYCGA---------------LGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 394
           G CG                LG  +  D  + E LS+   H    VC  +     L   G
Sbjct: 308 GQCGGSTCSAAAPRRVGGKFLGSQEGGDGAVVEALSAGGRH---SVCCVR-----LPGGG 359

Query: 395 SV-YGFGWMGFGSLGFPDRGVSDKVLRPRI-LDSLRAHHVSQ-----ISTGLYHTVVVTD 447
           +  Y +G    G LG  DR   D+   PR+   + R + V Q     ++ G  HTV V D
Sbjct: 360 TATYAWGRGDDGQLGSGDR--RDRRANPRVAATAARVNSVGQRPLRGLACGWAHTVFVVD 417


>gi|297598384|ref|NP_001045490.2| Os01g0964800 [Oryza sativa Japonica Group]
 gi|255674106|dbj|BAF07404.2| Os01g0964800, partial [Oryza sativa Japonica Group]
          Length = 496

 Score =  118 bits (296), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 95/323 (29%), Positives = 150/323 (46%), Gaps = 20/323 (6%)

Query: 167 QVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN 226
            V     H+A V ++G+VFT G+ S    GH      I  PRL+E+L       V  G  
Sbjct: 81  HVDCGVKHSALVTKNGEVFTWGEESGGRLGHGSREDSI-HPRLIESLAVCNVDIVACGEF 139

Query: 227 FTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 284
            T  +T  G ++T G  TH  G LGHG  +    PK IA   E  +V  ++ G  +   +
Sbjct: 140 HTCAVTTAGELYTWGDGTHNVGLLGHGKDVSHWIPKRIAGALEGLAVAYVSCGTWHTALI 199

Query: 285 TGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL------ 338
           T  G +++FG G+   LGHG +     P+ +++    G+  + V+ G  H  A+      
Sbjct: 200 TTMGQLFTFGDGTFGVLGHGNRESISCPKEVESL--SGLKTISVACGVWHTAAIVEVIVT 257

Query: 339 -----DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDT 393
                 SSG ++TWG G    LGHGD+  +  P  ++SL  +   ++      T  L  +
Sbjct: 258 QSSSSISSGKLFTWGDGDKHRLGHGDKEPRLKPTCVASLIDYDFHRIACGHSLTVGLTTS 317

Query: 394 GSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFG 453
           G V   G   +G LG P    SD  + P +++ +   +V Q++ G YH  V+T +  +F 
Sbjct: 318 GKVLSMGNTVYGQLGNPR---SDGKI-PCLVEEIVGENVVQVACGSYHVAVLTIKSEVFT 373

Query: 454 FGDNERAQLGHDTLRGCLEPTEI 476
           +G     +LGH  +     PT +
Sbjct: 374 WGKGANGRLGHGDIEDRKIPTLV 396



 Score = 94.7 bits (234), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 70/243 (28%), Positives = 118/243 (48%), Gaps = 25/243 (10%)

Query: 252 DTLDRPTPKSIA----PLEE--VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGE 305
           DT+ R T ++      PLE   V     +  G  +   VT NG V+++G  S   LGHG 
Sbjct: 54  DTVVRSTVRTDVLRPKPLESNLVLDAYHVDCGVKHSALVTKNGEVFTWGEESGGRLGHGS 113

Query: 306 QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY--CGALGHGDEIDK 363
           + D + PR I++     + +  V+ G+ H  A+ ++G +YTWG G    G LGHG ++  
Sbjct: 114 REDSIHPRLIESLAVCNVDI--VACGEFHTCAVTTAGELYTWGDGTHNVGLLGHGKDVSH 171

Query: 364 TLPEPLSSLKSHLAVQ-VCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPR 422
            +P+ ++     LAV  V      T ++   G ++ FG   FG LG  +R   + +  P+
Sbjct: 172 WIPKRIAGALEGLAVAYVSCGTWHTALITTMGQLFTFGDGTFGVLGHGNR---ESISCPK 228

Query: 423 ILDSLRAHHVSQISTGLYHTVVVTD-----------RGRLFGFGDNERAQLGHDTLRGCL 471
            ++SL       ++ G++HT  + +            G+LF +GD ++ +LGH      L
Sbjct: 229 EVESLSGLKTISVACGVWHTAAIVEVIVTQSSSSISSGKLFTWGDGDKHRLGHGDKEPRL 288

Query: 472 EPT 474
           +PT
Sbjct: 289 KPT 291



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 79/272 (29%), Positives = 121/272 (44%), Gaps = 19/272 (6%)

Query: 116 ITTGRYHTLLISNSS---VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +  G +HT  ++ +     +  G+   G+LGHG + +  +            V  VS   
Sbjct: 134 VACGEFHTCAVTTAGELYTWGDGTHNVGLLGHGKDVSHWIPKRIAGALEGLAVAYVSCGT 193

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            H A +   GQ+FT GD +    GH +    I  P+ VE+L G+    V  G+  T  + 
Sbjct: 194 WHTALITTMGQLFTFGDGTFGVLGHGN-RESISCPKEVESLSGLKTISVACGVWHTAAIV 252

Query: 233 -----------IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 281
                        G + T G     +LGHGD   R  P  +A L +     +IA G S  
Sbjct: 253 EVIVTQSSSSISSGKLFTWGDGDKHRLGHGDKEPRLKPTCVASLIDY-DFHRIACGHSLT 311

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 341
           + +T +G V S G+     LG+  + D   P  ++     G +VV+V+ G  HV  L   
Sbjct: 312 VGLTTSGKVLSMGNTVYGQLGN-PRSDGKIPCLVEEI--VGENVVQVACGSYHVAVLTIK 368

Query: 342 GYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
             V+TWGKG  G LGHGD  D+ +P  + +L+
Sbjct: 369 SEVFTWGKGANGRLGHGDIEDRKIPTLVEALR 400



 Score = 75.1 bits (183), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 64/223 (28%), Positives = 104/223 (46%), Gaps = 22/223 (9%)

Query: 116 ITTGRYHTLLISN-SSVFSCGSSLCGVLGHGP-ETTQCVSFTRINFPSAAHVVQVSASEN 173
           ++ G +HT LI+    +F+ G    GVLGHG  E+  C     +   S    + V+    
Sbjct: 189 VSCGTWHTALITTMGQLFTFGDGTFGVLGHGNRESISCPK--EVESLSGLKTISVACGVW 246

Query: 174 HAAFVLQ-----------SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 222
           H A +++           SG++FT GD      GH D   P  +P  V +L      ++ 
Sbjct: 247 HTAAIVEVIVTQSSSSISSGKLFTWGDGDKHRLGHGD-KEPRLKPTCVASLIDYDFHRIA 305

Query: 223 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEV--GSVVQIAAGPSY 280
            G + T  LT  G V + G+  +GQLG+     R   K    +EE+   +VVQ+A G  +
Sbjct: 306 CGHSLTVGLTTSGKVLSMGNTVYGQLGN----PRSDGKIPCLVEEIVGENVVQVACGSYH 361

Query: 281 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGI 323
           +  +T    V+++G G+N  LGHG+  D   P  ++  R + +
Sbjct: 362 VAVLTIKSEVFTWGKGANGRLGHGDIEDRKIPTLVEALRDRSV 404



 Score = 62.8 bits (151), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 52/186 (27%), Positives = 82/186 (44%), Gaps = 4/186 (2%)

Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 351
           S  +GS+  +    + D L+P+ +++     +    V  G +H   +  +G V+TWG+  
Sbjct: 48  SVRTGSDTVVRSTVRTDVLRPKPLES--NLVLDAYHVDCGVKHSALVTKNGEVFTWGEES 105

Query: 352 CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 411
            G LGHG   D   P  + SL       V   +  T  +   G +Y +G  G  ++G   
Sbjct: 106 GGRLGHGSREDSIHPRLIESLAVCNVDIVACGEFHTCAVTTAGELYTWG-DGTHNVGLLG 164

Query: 412 RGVSDKVLRP-RILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGC 470
            G       P RI  +L    V+ +S G +HT ++T  G+LF FGD     LGH      
Sbjct: 165 HGKDVSHWIPKRIAGALEGLAVAYVSCGTWHTALITTMGQLFTFGDGTFGVLGHGNRESI 224

Query: 471 LEPTEI 476
             P E+
Sbjct: 225 SCPKEV 230


>gi|443698344|gb|ELT98382.1| hypothetical protein CAPTEDRAFT_123860, partial [Capitella teleta]
          Length = 409

 Score =  118 bits (296), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 89/277 (32%), Positives = 134/277 (48%), Gaps = 23/277 (8%)

Query: 207 PRLVEAL-KGVPCKQVTAGLNFTGFLTIRGHVHTCG-----SNTHGQLGHGDTLDRPTPK 260
           P+ +E   KG    QV+AG      +T+   ++T       ++  GQLGHGDT     PK
Sbjct: 11  PQQLEVFTKGHSALQVSAGHAHFAVVTVERELYTWANAQGLTSMAGQLGHGDTASYKAPK 70

Query: 261 SIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHD----ELQPRAIQ 316
            +  L+++ +V Q++ G  + + VT +G VYSFGS    CLG+G+Q D       P  + 
Sbjct: 71  RVEALDKI-AVNQVSCGEDFTVCVTDDGAVYSFGSDYYGCLGNGDQGDGEDCACSPSLVS 129

Query: 317 TFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHL 376
            F  +   V++VS GD HV+AL   G VYTWG G  G LG G E D + P+ +++   H 
Sbjct: 130 FFVNR--PVLQVSCGDAHVIALTKEGEVYTWGSGEFGRLGIGTEDDHSSPQKVATRGRHG 187

Query: 377 AVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD--RGVSDKVLRPRI--------LDS 426
              V A    +F+L   G +   G      LG     +G+  K +   I        +  
Sbjct: 188 IRSVHAGPDGSFILRTNGRLQSCGSNEHNKLGLNSCAKGLRSKQVSYDIPCNYNFTTVKP 247

Query: 427 LRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 463
           L  +++  +S G  H+ V+   G L  FG N+  QLG
Sbjct: 248 LSKYNIVAVSPGQTHSAVIDGFGHLITFGSNKYGQLG 284



 Score = 84.7 bits (208), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 86/326 (26%), Positives = 143/326 (43%), Gaps = 26/326 (7%)

Query: 159 FPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCC-----GHRDTNRPIFRPRLVEAL 213
           F      +QVSA   H A V    +++T  +           GH DT      P+ VEAL
Sbjct: 17  FTKGHSALQVSAGHAHFAVVTVERELYTWANAQGLTSMAGQLGHGDT-ASYKAPKRVEAL 75

Query: 214 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDT---LDRPTPKSIAPLEEVGS 270
             +   QV+ G +FT  +T  G V++ GS+ +G LG+GD     D     S+        
Sbjct: 76  DKIAVNQVSCGEDFTVCVTDDGAVYSFGSDYYGCLGNGDQGDGEDCACSPSLVSFFVNRP 135

Query: 271 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 330
           V+Q++ G ++++A+T  G VY++GSG    LG G + D   P+ + T  R GI  V   A
Sbjct: 136 VLQVSCGDAHVIALTKEGEVYTWGSGEFGRLGIGTEDDHSSPQKVATRGRHGIRSVH--A 193

Query: 331 GDEHVVALDSSGYVYTWGKGYCGALG--------HGDEIDKTLP-----EPLSSLKSHLA 377
           G +    L ++G + + G      LG           ++   +P       +  L  +  
Sbjct: 194 GPDGSFILRTNGRLQSCGSNEHNKLGLNSCAKGLRSKQVSYDIPCNYNFTTVKPLSKYNI 253

Query: 378 VQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIST 437
           V V   +  + V+   G +  FG   +G LG  D    ++     +  SL   +V++++ 
Sbjct: 254 VAVSPGQTHSAVIDGFGHLITFGSNKYGQLGVGD--FKERKTVTMVTGSLVGKNVTKVAC 311

Query: 438 GLYHTVVVTDRGRLFGFGDNERAQLG 463
           G   TV+ T    ++  G +E  +LG
Sbjct: 312 GDRSTVIATSDNLIYSCGFSENGRLG 337



 Score = 73.2 bits (178), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 58/230 (25%), Positives = 101/230 (43%), Gaps = 14/230 (6%)

Query: 256 RPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC-----LGHGEQHDEL 310
           + TP+ +    +  S +Q++AG ++   VT    +Y++ +          LGHG+     
Sbjct: 8   KLTPQQLEVFTKGHSALQVSAGHAHFAVVTVERELYTWANAQGLTSMAGQLGHGDTASYK 67

Query: 311 QPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEID----KTLP 366
            P+ ++   +  I V +VS G++  V +   G VY++G  Y G LG+GD+ D       P
Sbjct: 68  APKRVEALDK--IAVNQVSCGEDFTVCVTDDGAVYSFGSDYYGCLGNGDQGDGEDCACSP 125

Query: 367 EPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDS 426
             +S   +   +QV         L   G VY +G   FG LG    G  D    P+ + +
Sbjct: 126 SLVSFFVNRPVLQVSCGDAHVIALTKEGEVYTWGSGEFGRLGI---GTEDDHSSPQKVAT 182

Query: 427 LRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 476
              H +  +  G   + ++   GRL   G NE  +LG ++    L   ++
Sbjct: 183 RGRHGIRSVHAGPDGSFILRTNGRLQSCGSNEHNKLGLNSCAKGLRSKQV 232



 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 53/180 (29%), Positives = 79/180 (43%), Gaps = 19/180 (10%)

Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 349
           VYS+G G            +L P+ ++ F  KG   ++VSAG  H   +     +YTW  
Sbjct: 1   VYSWGGG------------KLTPQQLEVFT-KGHSALQVSAGHAHFAVVTVERELYTWAN 47

Query: 350 G-----YCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGF 404
                   G LGHGD      P+ + +L      QV   +  T  + D G+VY FG   +
Sbjct: 48  AQGLTSMAGQLGHGDTASYKAPKRVEALDKIAVNQVSCGEDFTVCVTDDGAVYSFGSDYY 107

Query: 405 GSLGFPDRGV-SDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 463
           G LG  D+G   D    P ++       V Q+S G  H + +T  G ++ +G  E  +LG
Sbjct: 108 GCLGNGDQGDGEDCACSPSLVSFFVNRPVLQVSCGDAHVIALTKEGEVYTWGSGEFGRLG 167



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 68/262 (25%), Positives = 115/262 (43%), Gaps = 26/262 (9%)

Query: 115 QITTGRYHTLLISNS-SVFSCGSSLCGVLGHGP----ETTQCVSFTRINFPSAAHVVQVS 169
           Q++ G   T+ +++  +V+S GS   G LG+G     E   C S + ++F     V+QVS
Sbjct: 82  QVSCGEDFTVCVTDDGAVYSFGSDYYGCLGNGDQGDGEDCAC-SPSLVSFFVNRPVLQVS 140

Query: 170 ASENHAAFVLQSGQVFTCGDNS--SFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF 227
             + H   + + G+V+T G         G  D +     P+ V        + V AG + 
Sbjct: 141 CGDAHVIALTKEGEVYTWGSGEFGRLGIGTEDDHSS---PQKVATRGRHGIRSVHAGPDG 197

Query: 228 TGFLTIRGHVHTCGSNTHGQLGHGD----------TLDRPTP---KSIAPLEEVGSVVQI 274
           +  L   G + +CGSN H +LG             + D P      ++ PL +  ++V +
Sbjct: 198 SFILRTNGRLQSCGSNEHNKLGLNSCAKGLRSKQVSYDIPCNYNFTTVKPLSKY-NIVAV 256

Query: 275 AAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEH 334
           + G ++   + G G + +FGS     LG G+   E +   + T    G +V +V+ GD  
Sbjct: 257 SPGQTHSAVIDGFGHLITFGSNKYGQLGVGD-FKERKTVTMVTGSLVGKNVTKVACGDRS 315

Query: 335 VVALDSSGYVYTWGKGYCGALG 356
            V   S   +Y+ G    G LG
Sbjct: 316 TVIATSDNLIYSCGFSENGRLG 337



 Score = 42.7 bits (99), Expect = 0.46,   Method: Compositional matrix adjust.
 Identities = 49/205 (23%), Positives = 83/205 (40%), Gaps = 20/205 (9%)

Query: 114 MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +Q++ G  H + L     V++ GS   G LG G E     S  ++       +  V A  
Sbjct: 137 LQVSCGDAHVIALTKEGEVYTWGSGEFGRLGIGTEDDHS-SPQKVATRGRHGIRSVHAGP 195

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCK------------- 219
           + +  +  +G++ +CG N     G     + +   R  +    +PC              
Sbjct: 196 DGSFILRTNGRLQSCGSNEHNKLGLNSCAKGL---RSKQVSYDIPCNYNFTTVKPLSKYN 252

Query: 220 --QVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAG 277
              V+ G   +  +   GH+ T GSN +GQLG GD  +R T   +       +V ++A G
Sbjct: 253 IVAVSPGQTHSAVIDGFGHLITFGSNKYGQLGVGDFKERKTVTMVTGSLVGKNVTKVACG 312

Query: 278 PSYMLAVTGNGVVYSFGSGSNFCLG 302
               +  T + ++YS G   N  LG
Sbjct: 313 DRSTVIATSDNLIYSCGFSENGRLG 337


>gi|74204005|dbj|BAE29004.1| unnamed protein product [Mus musculus]
          Length = 926

 Score =  118 bits (296), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 81/260 (31%), Positives = 133/260 (51%), Gaps = 6/260 (2%)

Query: 206 RPRLVEA-LKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP 264
           +PR ++A   G+   Q  +G + +  L     V++CG N+ GQLG         P+ I  
Sbjct: 11  KPRRLKAGTSGIELLQAASGEHHSLLLFSNHRVYSCGDNSWGQLGQRRDQSTERPEPIQA 70

Query: 265 LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGE-QHDELQPRAIQTFRRKGI 323
           L ++  V  ++ G  + +AV   G V+++G+GS   LG GE +     P  I+     GI
Sbjct: 71  LNDL-HVDLVSCGKEHSVAVCHKGKVFAWGAGSEGQLGIGEFKEISFMPTKIKAL--AGI 127

Query: 324 HVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG-DEIDKTLPEPLSSLKSHLAVQVCA 382
            +++VS G  H +AL   G+V++WG+   G LG G +   + +P+ + SL+     QV A
Sbjct: 128 KIIQVSCGHYHSLALSEDGHVFSWGRNSEGQLGLGKNSRSQAIPQKVKSLEGIPLAQVAA 187

Query: 383 RKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHT 442
               +F L  TG+ +G+G    G L      V +++ +P  + +L+   V  IS G  HT
Sbjct: 188 GGTHSFALSLTGTSFGWGSNRSGQLALSGNKVKEQIYKPHSIGALKNLSVIYISCGYEHT 247

Query: 443 VVVTDRGRLFGFGDNERAQL 462
            V+T+ G++F FG N   QL
Sbjct: 248 AVLTEEGQVFTFGGNSSGQL 267



 Score = 96.3 bits (238), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 86/301 (28%), Positives = 137/301 (45%), Gaps = 27/301 (8%)

Query: 114 MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHV 165
           +Q  +G +H+LL+ SN  V+SCG +  G LG         PE  Q ++          HV
Sbjct: 25  LQAASGEHHSLLLFSNHRVYSCGDNSWGQLGQRRDQSTERPEPIQALN--------DLHV 76

Query: 166 VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 225
             VS  + H+  V   G+VF  G  S    G  +     F P  ++AL G+   QV+ G 
Sbjct: 77  DLVSCGKEHSVAVCHKGKVFAWGAGSEGQLGIGEFKEISFMPTKIKALAGIKIIQVSCGH 136

Query: 226 NFTGFLTIRGHVHTCGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 284
             +  L+  GHV + G N+ GQLG G ++  +  P+ +  LE +  + Q+AAG ++  A+
Sbjct: 137 YHSLALSEDGHVFSWGRNSEGQLGLGKNSRSQAIPQKVKSLEGI-PLAQVAAGGTHSFAL 195

Query: 285 TGNGVVYSFGSGSN----FCLGHGEQHDEL-QPRAIQTFRRKGIHVVRVSAGDEHVVALD 339
           +  G   SFG GSN      L   +  +++ +P +I     K + V+ +S G EH   L 
Sbjct: 196 SLTGT--SFGWGSNRSGQLALSGNKVKEQIYKPHSIGAL--KNLSVIYISCGYEHTAVLT 251

Query: 340 SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGF 399
             G V+T+G    G L       +  P+ +  +   ++   CA       +  TG V   
Sbjct: 252 EEGQVFTFGGNSSGQLQPSPRSGQRGPQLIEGIGGRVSQIECASYHTIAYVYTTGQVVSL 311

Query: 400 G 400
           G
Sbjct: 312 G 312



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 80/301 (26%), Positives = 148/301 (49%), Gaps = 14/301 (4%)

Query: 161 SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQ 220
           S   ++Q ++ E+H+  +  + +V++CGDNS    G R  ++   RP  ++AL  +    
Sbjct: 20  SGIELLQAASGEHHSLLLFSNHRVYSCGDNSWGQLGQR-RDQSTERPEPIQALNDLHVDL 78

Query: 221 VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRP-TPKSIAPLEEVGSVVQIAAGPS 279
           V+ G   +  +  +G V   G+ + GQLG G+  +    P  I  L  +  ++Q++ G  
Sbjct: 79  VSCGKEHSVAVCHKGKVFAWGAGSEGQLGIGEFKEISFMPTKIKALAGI-KIIQVSCGHY 137

Query: 280 YMLAVTGNGVVYSFGSGSNFCLGHGEQ-HDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
           + LA++ +G V+S+G  S   LG G+    +  P+ +++   +GI + +V+AG  H  AL
Sbjct: 138 HSLALSEDGHVFSWGRNSEGQLGLGKNSRSQAIPQKVKSL--EGIPLAQVAAGGTHSFAL 195

Query: 339 DSSGYVYTWGKGYCGALG-HGDEIDKTLPEP--LSSLKSHLAVQVCARKRKTFVLVDTGS 395
             +G  + WG    G L   G+++ + + +P  + +LK+   + +      T VL + G 
Sbjct: 196 SLTGTSFGWGSNRSGQLALSGNKVKEQIYKPHSIGALKNLSVIYISCGYEHTAVLTEEGQ 255

Query: 396 VYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV-VTDRGRLFGF 454
           V+ FG    G L    R        P++++ +    VSQI    YHT+  V   G++   
Sbjct: 256 VFTFGGNSSGQLQPSPRSGQRG---PQLIEGI-GGRVSQIECASYHTIAYVYTTGQVVSL 311

Query: 455 G 455
           G
Sbjct: 312 G 312



 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 39/143 (27%), Positives = 70/143 (48%), Gaps = 4/143 (2%)

Query: 322 GIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKS-HLAVQV 380
           GI +++ ++G+ H + L S+  VY+ G    G LG   +     PEP+ +L   H+ +  
Sbjct: 21  GIELLQAASGEHHSLLLFSNHRVYSCGDNSWGQLGQRRDQSTERPEPIQALNDLHVDLVS 80

Query: 381 CARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLY 440
           C  K  +  +   G V+ +G    G LG  +    +    P  + +L    + Q+S G Y
Sbjct: 81  CG-KEHSVAVCHKGKVFAWGAGSEGQLGIGE--FKEISFMPTKIKALAGIKIIQVSCGHY 137

Query: 441 HTVVVTDRGRLFGFGDNERAQLG 463
           H++ +++ G +F +G N   QLG
Sbjct: 138 HSLALSEDGHVFSWGRNSEGQLG 160


>gi|357520083|ref|XP_003630330.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
 gi|355524352|gb|AET04806.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
          Length = 279

 Score =  118 bits (296), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 91/276 (32%), Positives = 131/276 (47%), Gaps = 9/276 (3%)

Query: 161 SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQ 220
           S  HV+ +SA  +H   +L    V + G       GH DT+  +  P  + A  G     
Sbjct: 10  SPPHVLLISAGASHTVALLTGNVVCSWGRGEDGQLGHGDTDDRLL-PTKLSAFDGQDIVS 68

Query: 221 VTAGLNFTGFLTIRGH-VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPS 279
           VT G ++T   +  G  V++ G    G+LGHGD  D   P  I  L+ +  + QI+ G  
Sbjct: 69  VTCGADYTVARSKSGKDVYSWGWGDFGRLGHGDPSDLFIPHPIRALQGL-RIKQISCGDC 127

Query: 280 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 339
           + LAVT    V S+G   N  LG G   D   P+ I  F  +GI +  V+AG EH VA+ 
Sbjct: 128 HCLAVTMENKVLSWGRNQNGELGLGTTKDSHVPQKILAF--EGIRIKMVAAGAEHSVAIT 185

Query: 340 SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGF 399
             G +Y WG G  G LG GD  D+ +PE + ++     V V    R T  +  +G +Y  
Sbjct: 186 EDGDLYGWGWGRYGNLGLGDTNDRLIPEKV-NIDGDKIVMVSCGWRHTISISSSGGLYTH 244

Query: 400 GWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQI 435
           GW  +G LG  D    +  L PR + +L    +SQ+
Sbjct: 245 GWSKYGQLGHGD---FEDCLVPRKVQALSDKLISQV 277



 Score =  118 bits (296), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 75/257 (29%), Positives = 129/257 (50%), Gaps = 8/257 (3%)

Query: 221 VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 280
           ++AG + T  L     V + G    GQLGHGDT DR  P  ++  +    +V +  G  Y
Sbjct: 17  ISAGASHTVALLTGNVVCSWGRGEDGQLGHGDTDDRLLPTKLSAFDGQ-DIVSVTCGADY 75

Query: 281 MLAVTGNGV-VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 339
            +A + +G  VYS+G G    LGHG+  D   P  I+    +G+ + ++S GD H +A+ 
Sbjct: 76  TVARSKSGKDVYSWGWGDFGRLGHGDPSDLFIPHPIRAL--QGLRIKQISCGDCHCLAVT 133

Query: 340 SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGF 399
               V +WG+   G LG G   D  +P+ + + +      V A    +  + + G +YG+
Sbjct: 134 MENKVLSWGRNQNGELGLGTTKDSHVPQKILAFEGIRIKMVAAGAEHSVAITEDGDLYGW 193

Query: 400 GWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNER 459
           GW  +G+LG  D   +D+++  ++  ++    +  +S G  HT+ ++  G L+  G ++ 
Sbjct: 194 GWGRYGNLGLGD--TNDRLIPEKV--NIDGDKIVMVSCGWRHTISISSSGGLYTHGWSKY 249

Query: 460 AQLGHDTLRGCLEPTEI 476
            QLGH     CL P ++
Sbjct: 250 GQLGHGDFEDCLVPRKV 266



 Score =  108 bits (271), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 84/269 (31%), Positives = 136/269 (50%), Gaps = 8/269 (2%)

Query: 114 MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           + I+ G  HT+ L++ + V S G    G LGHG +T   +  T+++      +V V+   
Sbjct: 15  LLISAGASHTVALLTGNVVCSWGRGEDGQLGHG-DTDDRLLPTKLSAFDGQDIVSVTCGA 73

Query: 173 NHAAFVLQSGQ-VFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
           ++     +SG+ V++ G       GH D +  +F P  + AL+G+  KQ++ G      +
Sbjct: 74  DYTVARSKSGKDVYSWGWGDFGRLGHGDPS-DLFIPHPIRALQGLRIKQISCGDCHCLAV 132

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
           T+   V + G N +G+LG G T D   P+ I   E +  +  +AAG  + +A+T +G +Y
Sbjct: 133 TMENKVLSWGRNQNGELGLGTTKDSHVPQKILAFEGI-RIKMVAAGAEHSVAITEDGDLY 191

Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 351
            +G G    LG G+ +D L P  +      G  +V VS G  H +++ SSG +YT G   
Sbjct: 192 GWGWGRYGNLGLGDTNDRLIPEKVNI---DGDKIVMVSCGWRHTISISSSGGLYTHGWSK 248

Query: 352 CGALGHGDEIDKTLPEPLSSLKSHLAVQV 380
            G LGHGD  D  +P  + +L   L  QV
Sbjct: 249 YGQLGHGDFEDCLVPRKVQALSDKLISQV 277



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 54/158 (34%), Positives = 76/158 (48%), Gaps = 4/158 (2%)

Query: 324 HVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCAR 383
           HV+ +SAG  H VAL +   V +WG+G  G LGHGD  D+ LP  LS+      V V   
Sbjct: 13  HVLLISAGASHTVALLTGNVVCSWGRGEDGQLGHGDTDDRLLPTKLSAFDGQDIVSVTCG 72

Query: 384 KRKTFVLVDTG-SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHT 442
              T     +G  VY +GW  FG LG  D      +  P  + +L+   + QIS G  H 
Sbjct: 73  ADYTVARSKSGKDVYSWGWGDFGRLGHGD---PSDLFIPHPIRALQGLRIKQISCGDCHC 129

Query: 443 VVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQE 480
           + VT   ++  +G N+  +LG  T +    P +I   E
Sbjct: 130 LAVTMENKVLSWGRNQNGELGLGTTKDSHVPQKILAFE 167


>gi|449443826|ref|XP_004139677.1| PREDICTED: uncharacterized protein LOC101214149 [Cucumis sativus]
          Length = 1118

 Score =  118 bits (296), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 87/314 (27%), Positives = 143/314 (45%), Gaps = 19/314 (6%)

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
           H+A V + G+VFT G+ +    G     + + +PRLVEAL       V  G   T  +T+
Sbjct: 287 HSAIVTRQGEVFTWGEETGGRLG-LGMGKDVTQPRLVEALAATTVDLVACGEFHTCAVTM 345

Query: 234 RGHVHTCGSNTH--GQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
            G ++T G   H  G LG+G  +    PK I+ + E   V  +A GP +   ++  G ++
Sbjct: 346 DGELYTWGDGVHNAGLLGNGTDVSHWMPKRISGILEGLQVAYVACGPWHTALISSTGQLF 405

Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS----------- 340
           +FG G+   LGHG++     PR + +    G+  + V+ G  H  A+             
Sbjct: 406 TFGDGTFGVLGHGDKKSISYPREVDSL--TGLRTIAVACGVWHTAAVVEVIMTQSSTSIP 463

Query: 341 SGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 400
           SG ++TWG G    LGHGD+  +  P  + +L  +   ++      T  L  +G V+  G
Sbjct: 464 SGKLFTWGDGDKNRLGHGDKEPRLKPTCVPALIDYNFHKIACGHSITIGLTTSGQVFTVG 523

Query: 401 WMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERA 460
              +G LG P        L   + D L      +++ G YH +V+T +  ++ +G     
Sbjct: 524 SSVYGQLGNPHADGKQPCL---VEDKLLGESAEEVACGAYHVMVLTSKNEVYTWGKGANG 580

Query: 461 QLGHDTLRGCLEPT 474
           +LGH  +     PT
Sbjct: 581 RLGHGDVEDRKSPT 594



 Score = 95.1 bits (235), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 82/281 (29%), Positives = 128/281 (45%), Gaps = 19/281 (6%)

Query: 116 ITTGRYHTLLIS-NSSVFSCGSSL--CGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +  G +HT  ++ +  +++ G  +   G+LG+G + +  +            V  V+   
Sbjct: 333 VACGEFHTCAVTMDGELYTWGDGVHNAGLLGNGTDVSHWMPKRISGILEGLQVAYVACGP 392

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            H A +  +GQ+FT GD +    GH D  + I  PR V++L G+    V  G+  T  + 
Sbjct: 393 WHTALISSTGQLFTFGDGTFGVLGHGD-KKSISYPREVDSLTGLRTIAVACGVWHTAAVV 451

Query: 233 -----------IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 281
                        G + T G     +LGHGD   R  P  +  L +  +  +IA G S  
Sbjct: 452 EVIMTQSSTSIPSGKLFTWGDGDKNRLGHGDKEPRLKPTCVPALIDY-NFHKIACGHSIT 510

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 341
           + +T +G V++ GS     LG+    D  QP  ++  +  G     V+ G  HV+ L S 
Sbjct: 511 IGLTTSGQVFTVGSSVYGQLGN-PHADGKQPCLVED-KLLGESAEEVACGAYHVMVLTSK 568

Query: 342 GYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK-SHLAVQVC 381
             VYTWGKG  G LGHGD  D+  P  + SLK  H+ +  C
Sbjct: 569 NEVYTWGKGANGRLGHGDVEDRKSPTLVESLKDKHVKIIAC 609



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 72/238 (30%), Positives = 116/238 (48%), Gaps = 23/238 (9%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSASEN 173
           +  G +HT LIS++  +F+ G    GVLGHG +  + +S+ R ++  +    + V+    
Sbjct: 388 VACGPWHTALISSTGQLFTFGDGTFGVLGHGDK--KSISYPREVDSLTGLRTIAVACGVW 445

Query: 174 HAAFVLQ-----------SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 222
           H A V++           SG++FT GD      GH D   P  +P  V AL      ++ 
Sbjct: 446 HTAAVVEVIMTQSSTSIPSGKLFTWGDGDKNRLGHGD-KEPRLKPTCVPALIDYNFHKIA 504

Query: 223 AGLNFTGFLTIRGHVHTCGSNTHGQLG--HGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 280
            G + T  LT  G V T GS+ +GQLG  H D   +P       L E  S  ++A G  +
Sbjct: 505 CGHSITIGLTTSGQVFTVGSSVYGQLGNPHADG-KQPCLVEDKLLGE--SAEEVACGAYH 561

Query: 281 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
           ++ +T    VY++G G+N  LGHG+  D   P  +++ + K  HV  ++ G  +  A+
Sbjct: 562 VMVLTSKNEVYTWGKGANGRLGHGDVEDRKSPTLVESLKDK--HVKIIACGSNYSAAI 617



 Score = 86.3 bits (212), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 76/296 (25%), Positives = 137/296 (46%), Gaps = 21/296 (7%)

Query: 204 IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 263
           +  P+ +E+   +  + +  G+  +  +T +G V T G  T G+LG G   D   P+ + 
Sbjct: 264 VLLPKPLESNIVLDAQHIACGVRHSAIVTRQGEVFTWGEETGGRLGLGMGKDVTQPRLVE 323

Query: 264 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC--LGHGEQHDELQPRAIQTFRRK 321
            L    +V  +A G  +  AVT +G +Y++G G +    LG+G       P+ I     +
Sbjct: 324 ALAAT-TVDLVACGEFHTCAVTMDGELYTWGDGVHNAGLLGNGTDVSHWMPKRISGIL-E 381

Query: 322 GIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKS------- 374
           G+ V  V+ G  H   + S+G ++T+G G  G LGHGD+   + P  + SL         
Sbjct: 382 GLQVAYVACGPWHTALISSTGQLFTFGDGTFGVLGHGDKKSISYPREVDSLTGLRTIAVA 441

Query: 375 ----HLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAH 430
               H A  V     ++   + +G ++ +G      LG  D+   +  L+P  + +L  +
Sbjct: 442 CGVWHTAAVVEVIMTQSSTSIPSGKLFTWGDGDKNRLGHGDK---EPRLKPTCVPALIDY 498

Query: 431 HVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH---DTLRGCLEPTEIFIQEMEE 483
           +  +I+ G   T+ +T  G++F  G +   QLG+   D  + CL   ++  +  EE
Sbjct: 499 NFHKIACGHSITIGLTTSGQVFTVGSSVYGQLGNPHADGKQPCLVEDKLLGESAEE 554



 Score = 49.7 bits (117), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 36/127 (28%), Positives = 58/127 (45%), Gaps = 12/127 (9%)

Query: 339 DSSGYVYTWGK---------GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFV 389
           D+ G ++ WG+         G   A       D  LP+PL S     A  +    R + +
Sbjct: 231 DALGDIFVWGEVISDNFMKPGADRASNVSSRTDVLLPKPLESNIVLDAQHIACGVRHSAI 290

Query: 390 LVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRG 449
           +   G V+ +G    G LG    G+   V +PR++++L A  V  ++ G +HT  VT  G
Sbjct: 291 VTRQGEVFTWGEETGGRLGL---GMGKDVTQPRLVEALAATTVDLVACGEFHTCAVTMDG 347

Query: 450 RLFGFGD 456
            L+ +GD
Sbjct: 348 ELYTWGD 354


>gi|444915471|ref|ZP_21235603.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
 gi|444713402|gb|ELW54302.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
          Length = 752

 Score =  118 bits (296), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 102/371 (27%), Positives = 165/371 (44%), Gaps = 16/371 (4%)

Query: 107 VETSAGNMQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHV 165
           VE  +G + +  G+YH+L +  + +V++ G +L G LG G          +   P    V
Sbjct: 244 VEDVSGVVAVAAGQYHSLAVRYDGTVWAWGDNLYGQLGDGKLEGNSRWLPK-QVPGLGGV 302

Query: 166 VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 225
           V VSA   H+  V   G V+  G+N+    G   +      P  V  + G     V AG 
Sbjct: 303 VAVSAGFYHSLVVRSDGTVWAWGNNAYGQLGG-GSRAHAASPVQVLGVSG--AVAVAAGY 359

Query: 226 NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 285
             +  +   G +   GSN  GQ G G     PTP  +  L     VV +AAG  ++LA+ 
Sbjct: 360 RHSLVVNSDGTLWAWGSNLDGQRGDGTLTRYPTPGRVPGLS---GVVSVAAGGGHVLALL 416

Query: 286 GNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVY 345
            +G V+++G  ++  LG G +H    PR +         VV V+AG    +A+   G V+
Sbjct: 417 SDGTVWAWGDNASGQLGDGTRHSRWVPRQVPELS----GVVAVAAGSSFSLAVRYDGSVW 472

Query: 346 TWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFG 405
           +WG    G LGHG     ++P  +  L     V V A       +   G+V+G+G+  +G
Sbjct: 473 SWGDNAYGQLGHGSTDASSVPLHVRELSE--VVAVAAGSMHALAVRADGTVWGWGFNDYG 530

Query: 406 SLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHD 465
            LG    G+S +   P  +  L    +  ++    H++ V   G ++ +G+N  ++LG  
Sbjct: 531 QLGDGFEGISARRYSPVQVPGLSG--MVSVAADFGHSLAVRADGTVWAWGNNTDSELGDG 588

Query: 466 TLRGCLEPTEI 476
           T    L P  +
Sbjct: 589 TTTRRLVPLRV 599



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 107/357 (29%), Positives = 163/357 (45%), Gaps = 25/357 (7%)

Query: 111 AGNMQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS 169
           +G + +  G  H+L + S+ SV++ G++  G LG  PE    V + R+   S   VV V+
Sbjct: 198 SGVVSVAAGGNHSLAVRSDGSVWAWGNNASGQLGGAPEAAYPVPW-RVEDVSG--VVAVA 254

Query: 170 ASENHAAFVLQSGQVFTCGDN--SSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF 227
           A + H+  V   G V+  GDN       G  + N   + P+ V  L GV    V+AG   
Sbjct: 255 AGQYHSLAVRYDGTVWAWGDNLYGQLGDGKLEGNSR-WLPKQVPGLGGVVA--VSAGFYH 311

Query: 228 TGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN 287
           +  +   G V   G+N +GQLG G      +P  +     V   V +AAG  + L V  +
Sbjct: 312 SLVVRSDGTVWAWGNNAYGQLGGGSRAHAASPVQVL---GVSGAVAVAAGYRHSLVVNSD 368

Query: 288 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH-VVRVSAGDEHVVALDSSGYVYT 346
           G ++++GS  +     G++ D    R     R  G+  VV V+AG  HV+AL S G V+ 
Sbjct: 369 GTLWAWGSNLD-----GQRGDGTLTRYPTPGRVPGLSGVVSVAAGGGHVLALLSDGTVWA 423

Query: 347 WGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGS 406
           WG    G LG G    + +P  +  L     V V A    +  +   GSV+ +G   +G 
Sbjct: 424 WGDNASGQLGDGTRHSRWVPRQVPELSG--VVAVAAGSSFSLAVRYDGSVWSWGDNAYGQ 481

Query: 407 LGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 463
           LG      S   L  R L  + A     ++ G  H + V   G ++G+G N+  QLG
Sbjct: 482 LGHGSTDASSVPLHVRELSEVVA-----VAAGSMHALAVRADGTVWGWGFNDYGQLG 533



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 106/377 (28%), Positives = 166/377 (44%), Gaps = 27/377 (7%)

Query: 111 AGNMQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS 169
           +G + +  G  H+L + S+ SV++ G +  G LG G    + V    +     + VV V+
Sbjct: 148 SGVVSVVAGDTHSLAVRSDGSVWAWGRNTSGQLGDGTRDDRAVP---VQVTGLSGVVSVA 204

Query: 170 ASENHAAFVLQSGQVFTCGDNSSF-CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFT 228
           A  NH+  V   G V+  G+N+S    G  +   P+  P  VE + GV    V AG   +
Sbjct: 205 AGGNHSLAVRSDGSVWAWGNNASGQLGGAPEAAYPV--PWRVEDVSGVVA--VAAGQYHS 260

Query: 229 GFLTIRGHVHTCGSNTHGQLGHG--DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTG 286
             +   G V   G N +GQLG G  +   R  PK +  L   G VV ++AG  + L V  
Sbjct: 261 LAVRYDGTVWAWGDNLYGQLGDGKLEGNSRWLPKQVPGL---GGVVAVSAGFYHSLVVRS 317

Query: 287 NGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYT 346
           +G V+++G+ +   LG G +     P  +Q     G   V V+AG  H + ++S G ++ 
Sbjct: 318 DGTVWAWGNNAYGQLGGGSRAHAASP--VQVLGVSG--AVAVAAGYRHSLVVNSDGTLWA 373

Query: 347 WGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGS 406
           WG    G  G G       P  +  L     V V A       L+  G+V+ +G    G 
Sbjct: 374 WGSNLDGQRGDGTLTRYPTPGRVPGLSG--VVSVAAGGGHVLALLSDGTVWAWGDNASGQ 431

Query: 407 LGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDT 466
           LG    G       PR +  L    V  ++ G   ++ V   G ++ +GDN   QLGH +
Sbjct: 432 LG---DGTRHSRWVPRQVPELSG--VVAVAAGSSFSLAVRYDGSVWSWGDNAYGQLGHGS 486

Query: 467 LRGCLEPTEIFIQEMEE 483
                 P  + ++E+ E
Sbjct: 487 TDASSVP--LHVRELSE 501



 Score = 98.6 bits (244), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 79/241 (32%), Positives = 114/241 (47%), Gaps = 16/241 (6%)

Query: 231 LTIR--GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG 288
           L +R  G V T G N HGQLG G TL R TP  +  L  V +V   AAG  + LA+  +G
Sbjct: 61  LAVRPDGTVWTTGGNGHGQLGDGTTLSRRTPVQVQGLSGVAAV---AAGHGHSLALRYDG 117

Query: 289 VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 348
            V+++G+ +   LG   + +   P  +Q     G  VV V AGD H +A+ S G V+ WG
Sbjct: 118 TVWAWGNNAYGQLGDDTRDNRTVP--VQVTGLSG--VVSVVAGDTHSLAVRSDGSVWAWG 173

Query: 349 KGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLG 408
           +   G LG G   D+ +P  ++ L     V V A    +  +   GSV+ +G    G LG
Sbjct: 174 RNTSGQLGDGTRDDRAVPVQVTGLSG--VVSVAAGGNHSLAVRSDGSVWAWGNNASGQLG 231

Query: 409 FPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLR 468
                      R   +  + A     ++ G YH++ V   G ++ +GDN   QLG   L 
Sbjct: 232 GAPEAAYPVPWRVEDVSGVVA-----VAAGQYHSLAVRYDGTVWAWGDNLYGQLGDGKLE 286

Query: 469 G 469
           G
Sbjct: 287 G 287



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 89/304 (29%), Positives = 136/304 (44%), Gaps = 15/304 (4%)

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
           H+  V   G V+T G N     G   T      P  V+ L GV    V AG   +  L  
Sbjct: 59  HSLAVRPDGTVWTTGGNGHGQLGD-GTTLSRRTPVQVQGLSGVAA--VAAGHGHSLALRY 115

Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
            G V   G+N +GQLG     +R  P  +  L     VV + AG ++ LAV  +G V+++
Sbjct: 116 DGTVWAWGNNAYGQLGDDTRDNRTVPVQVTGLS---GVVSVVAGDTHSLAVRSDGSVWAW 172

Query: 294 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 353
           G  ++  LG G + D   P  +Q     G  VV V+AG  H +A+ S G V+ WG    G
Sbjct: 173 GRNTSGQLGDGTRDDRAVP--VQVTGLSG--VVSVAAGGNHSLAVRSDGSVWAWGNNASG 228

Query: 354 ALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRG 413
            LG   E    +P  +  +     V V A +  +  +   G+V+ +G   +G LG     
Sbjct: 229 QLGGAPEAAYPVPWRVEDVSG--VVAVAAGQYHSLAVRYDGTVWAWGDNLYGQLGDGKLE 286

Query: 414 VSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEP 473
            + + L P+ +  L    V  +S G YH++VV   G ++ +G+N   QLG  +      P
Sbjct: 287 GNSRWL-PKQVPGLGG--VVAVSAGFYHSLVVRSDGTVWAWGNNAYGQLGGGSRAHAASP 343

Query: 474 TEIF 477
            ++ 
Sbjct: 344 VQVL 347



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 106/375 (28%), Positives = 161/375 (42%), Gaps = 27/375 (7%)

Query: 107 VETSAGNMQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHV 165
           V+  +G   +  G  H+L +  + +V++ G++  G LG      + V    +     + V
Sbjct: 94  VQGLSGVAAVAAGHGHSLALRYDGTVWAWGNNAYGQLGDDTRDNRTVP---VQVTGLSGV 150

Query: 166 VQVSASENHAAFVLQSGQVFTCGDNSS--FCCGHRDTNRPIFRPRLVEALKGVPCKQVTA 223
           V V A + H+  V   G V+  G N+S     G RD +R +  P  V  L GV    V A
Sbjct: 151 VSVVAGDTHSLAVRSDGSVWAWGRNTSGQLGDGTRD-DRAV--PVQVTGLSGV--VSVAA 205

Query: 224 GLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
           G N +  +   G V   G+N  GQLG       P P  +   E+V  VV +AAG  + LA
Sbjct: 206 GGNHSLAVRSDGSVWAWGNNASGQLGGAPEAAYPVPWRV---EDVSGVVAVAAGQYHSLA 262

Query: 284 VTGNGVVYSFGSGSNFCLGHG--EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 341
           V  +G V+++G      LG G  E +    P+ +         VV VSAG  H + + S 
Sbjct: 263 VRYDGTVWAWGDNLYGQLGDGKLEGNSRWLPKQVPGLG----GVVAVSAGFYHSLVVRSD 318

Query: 342 GYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGW 401
           G V+ WG    G LG G         P+  L    AV V A  R + V+   G+++ +G 
Sbjct: 319 GTVWAWGNNAYGQLGGGSRAHAA--SPVQVLGVSGAVAVAAGYRHSLVVNSDGTLWAWGS 376

Query: 402 MGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQ 461
              G  G    G   +   P  +  L    V  ++ G  H + +   G ++ +GDN   Q
Sbjct: 377 NLDGQRG---DGTLTRYPTPGRVPGLSG--VVSVAAGGGHVLALLSDGTVWAWGDNASGQ 431

Query: 462 LGHDTLRGCLEPTEI 476
           LG  T      P ++
Sbjct: 432 LGDGTRHSRWVPRQV 446



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 104/402 (25%), Positives = 167/402 (41%), Gaps = 64/402 (15%)

Query: 111 AGNMQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS 169
           +G + +  G  H+L++ S+ ++++ GS+L G  G G  T      T    P  + VV V+
Sbjct: 350 SGAVAVAAGYRHSLVVNSDGTLWAWGSNLDGQRGDGTLTRYP---TPGRVPGLSGVVSVA 406

Query: 170 ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
           A   H   +L  G V+  GDN+S   G   T    + PR V  L GV    V AG +F+ 
Sbjct: 407 AGGGHVLALLSDGTVWAWGDNASGQLGD-GTRHSRWVPRQVPELSGVVA--VAAGSSFSL 463

Query: 230 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 289
            +   G V + G N +GQLGHG T     P  +  L EV   V +AAG  + LAV  +G 
Sbjct: 464 AVRYDGSVWSWGDNAYGQLGHGSTDASSVPLHVRELSEV---VAVAAGSMHALAVRADGT 520

Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH-VVRVSAGDEHVVALDSSGYVYTWG 348
           V+ +G      LG G   + +  R     +  G+  +V V+A   H +A+ + G V+ WG
Sbjct: 521 VWGWGFNDYGQLGDG--FEGISARRYSPVQVPGLSGMVSVAADFGHSLAVRADGTVWAWG 578

Query: 349 KGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLG 408
                 LG G    + +P  +++  +     + A    +  +   GS++ +G    G LG
Sbjct: 579 NNTDSELGDGTTTRRLVPLRVNAPGT--VALLSAGYNYSMAMRADGSLWAWGTNFAGQLG 636

Query: 409 FPDRGVSDKVLRPRILDSLRA------------------------------------HH- 431
             D   + + +  R+   +RA                                    HH 
Sbjct: 637 --DGSTTSRAVPVRVQGPVRASTLAAGQSHSMAVGSDGFLWAWGFNFEGQLGDGTLTHHA 694

Query: 432 ----------VSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 463
                     V  +   L  ++ V   G L+ +G+N+  QLG
Sbjct: 695 LPVRVPGMSGVVAVDVTLNLSLAVRSDGSLWAWGNNDVGQLG 736



 Score = 82.4 bits (202), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 87/316 (27%), Positives = 137/316 (43%), Gaps = 28/316 (8%)

Query: 98  QSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRI 157
           + V   S +V  +AG+      RY      + SV+S G +  G LGHG      V    +
Sbjct: 444 RQVPELSGVVAVAAGSSFSLAVRY------DGSVWSWGDNAYGQLGHGSTDASSVP---L 494

Query: 158 NFPSAAHVVQVSASENHAAFVLQSGQVFTCG--DNSSFCCGHRDTNRPIFRPRLVEALKG 215
           +    + VV V+A   HA  V   G V+  G  D      G    +   + P  V  L G
Sbjct: 495 HVRELSEVVAVAAGSMHALAVRADGTVWGWGFNDYGQLGDGFEGISARRYSPVQVPGLSG 554

Query: 216 VPCKQVTAGLNFTGFLTIR--GHVHTCGSNTHGQLGHGDTLDRPTPKSI-APLEEVGSVV 272
           +    V+   +F   L +R  G V   G+NT  +LG G T  R  P  + AP    G+V 
Sbjct: 555 M----VSVAADFGHSLAVRADGTVWAWGNNTDSELGDGTTTRRLVPLRVNAP----GTVA 606

Query: 273 QIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGD 332
            ++AG +Y +A+  +G ++++G+     LG G       P  +Q   R       ++AG 
Sbjct: 607 LLSAGYNYSMAMRADGSLWAWGTNFAGQLGDGSTTSRAVPVRVQGPVRAST----LAAGQ 662

Query: 333 EHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVD 392
            H +A+ S G+++ WG  + G LG G      LP  +  +   +AV V      +  +  
Sbjct: 663 SHSMAVGSDGFLWAWGFNFEGQLGDGTLTHHALPVRVPGMSGVVAVDVT--LNLSLAVRS 720

Query: 393 TGSVYGFGWMGFGSLG 408
            GS++ +G    G LG
Sbjct: 721 DGSLWAWGNNDVGQLG 736


>gi|444910459|ref|ZP_21230644.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
 gi|444719396|gb|ELW60193.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
          Length = 693

 Score =  118 bits (296), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 126/437 (28%), Positives = 190/437 (43%), Gaps = 39/437 (8%)

Query: 48  LYPQKFRSLVDLAASQLCALHSIYAGMSRNVQIELLNRC----NGNWKRVLRFLQSVEHS 103
           L P +   L D+ A      HS+       V     N      +G   R L  +Q V   
Sbjct: 137 LAPVQVPGLTDVVALSSGIYHSLALRTDGTVWAWGDNASGQLGDGTATRRLSPVQ-VPGL 195

Query: 104 SDIVETSAGNMQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSA 162
           +D+V  SAG        YH+L + ++ +V++ GS+  G LG G  T +    + +     
Sbjct: 196 TDVVALSAGG-------YHSLAVRTDGTVWAWGSNFSGQLGDGTATPR---LSPVQVSGL 245

Query: 163 AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 222
            +VV +SA +++   +   G V+  G NS    G   T  P   P  V  L  V    ++
Sbjct: 246 TNVVALSADDSYTLALRTDGTVWAWGYNSYGQLGD-GTTTPRLSPVQVPGLTNVVA--LS 302

Query: 223 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSYM 281
           AG + +  L   G V   G N +GQLG+G     PT +S + P+  +  VV ++AG S+ 
Sbjct: 303 AGYSHSLALRTDGTVWAWGYNYNGQLGNG----IPTQRSPSIPVFGLIDVVALSAGYSHS 358

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 341
           LA+  +G V+++G  S   LG G       P  +         VV +SAGD H +AL + 
Sbjct: 359 LALRTDGTVWAWGYNSLGQLGDGTTIPRPSPVQVPDL----TDVVALSAGDSHSLALRTD 414

Query: 342 GYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGW 401
           G V  WG  Y G LG G    +  P  +  L     V + A    T  L   G+V+ +G 
Sbjct: 415 GTVRAWGVNYSGQLGDGTTTHRLSPVQVPDLTD--VVALSAGGNHTLALRTNGTVWAWGS 472

Query: 402 MGFGSLGFPDRGVSDKVLRPRI--LDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNER 459
              G LG       D    PR+  +  L   +V  +S G YH++ V   G ++ +G N  
Sbjct: 473 NSDGQLG-------DGTTTPRLSPVQMLGLTNVVALSAGYYHSLAVHTDGTVWAWGSNSD 525

Query: 460 AQLGHDTLRGCLEPTEI 476
            QLG  T    L P ++
Sbjct: 526 GQLGDGTTTHRLTPVQV 542



 Score =  115 bits (287), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 101/350 (28%), Positives = 162/350 (46%), Gaps = 21/350 (6%)

Query: 116 ITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           +  G  H+L + ++ +V++ GS+  G LG G  T +    + +  P    VV +SA  +H
Sbjct: 1   MAAGYSHSLALHTDGTVWAWGSNSSGQLGDGTTTPRG---SPVQVPGLTDVVALSAGNHH 57

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 234
              +   G V+  G NSS   G   T  P      V  L  V    ++AG ++T  L   
Sbjct: 58  CLALRTDGTVWAWGSNSSGQLGD-GTTTPRLSSVQVPGLTDVVA--LSAGSSYTLALRTD 114

Query: 235 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 294
           G V   G N +GQLG G T  R  P  +  L +V   V +++G  + LA+  +G V+++G
Sbjct: 115 GTVWAWGYNFYGQLGDGTTTPRLAPVQVPGLTDV---VALSSGIYHSLALRTDGTVWAWG 171

Query: 295 SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGA 354
             ++  LG G     L P  +         VV +SAG  H +A+ + G V+ WG  + G 
Sbjct: 172 DNASGQLGDGTATRRLSPVQVPGL----TDVVALSAGGYHSLAVRTDGTVWAWGSNFSGQ 227

Query: 355 LGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGV 414
           LG G    +  P  +S L +   V + A    T  L   G+V+ +G+  +G LG    G 
Sbjct: 228 LGDGTATPRLSPVQVSGLTN--VVALSADDSYTLALRTDGTVWAWGYNSYGQLG---DGT 282

Query: 415 SDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 464
           +   L P  +  L   +V  +S G  H++ +   G ++ +G N   QLG+
Sbjct: 283 TTPRLSPVQVPGLT--NVVALSAGYSHSLALRTDGTVWAWGYNYNGQLGN 330



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 107/371 (28%), Positives = 169/371 (45%), Gaps = 35/371 (9%)

Query: 114 MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           + ++ G  H+L L ++ +V++ G +  G LG G   T     + +  P    VV +SA +
Sbjct: 349 VALSAGYSHSLALRTDGTVWAWGYNSLGQLGDG---TTIPRPSPVQVPDLTDVVALSAGD 405

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTN---RPIFRPRLVEALKGVPCKQVTAGLNFTG 229
           +H+  +   G V   G N S   G   T     P+  P L + +       ++AG N T 
Sbjct: 406 SHSLALRTDGTVRAWGVNYSGQLGDGTTTHRLSPVQVPDLTDVVA------LSAGGNHTL 459

Query: 230 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG--SVVQIAAGPSYMLAVTGN 287
            L   G V   GSN+ GQLG G T    TP+ ++P++ +G  +VV ++AG  + LAV  +
Sbjct: 460 ALRTNGTVWAWGSNSDGQLGDGTT----TPR-LSPVQMLGLTNVVALSAGYYHSLAVHTD 514

Query: 288 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 347
           G V+++GS S+  LG G     L P  +         VV +SAGD H +AL + G V+ W
Sbjct: 515 GTVWAWGSNSDGQLGDGTTTHRLTPVQVPGL----TDVVALSAGDSHSLALRTDGTVWAW 570

Query: 348 GKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSL 407
           G      LG G    +  P  +  L     V + A    +  L   G+V+ +G   +G L
Sbjct: 571 GSNSSSQLGDGTTTPRGSPVQVPGLTD--VVALSAGGAHSLALRTDGTVWAWGSNYYGQL 628

Query: 408 GFPDRGVSDKVLRPRILDSLRAH--HVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHD 465
           G       D    PR+   L ++    S +  G  H++ +   G    +G+N   QLG  
Sbjct: 629 G-------DGTTTPRLFPVLVSNLTGTSNLYAGAGHSLALRTDGTGRAWGNNYGGQLGDG 681

Query: 466 TLRGCLEPTEI 476
           T    L P ++
Sbjct: 682 TSAFFLHPVQV 692



 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 96/356 (26%), Positives = 159/356 (44%), Gaps = 20/356 (5%)

Query: 121 YHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
           Y   L ++ +V++ G +  G LG G  T +    + +  P   +VV +SA  +H+  +  
Sbjct: 257 YTLALRTDGTVWAWGYNSYGQLGDGTTTPR---LSPVQVPGLTNVVALSAGYSHSLALRT 313

Query: 181 SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTC 240
            G V+  G N +   G+     P  R   +     +    ++AG + +  L   G V   
Sbjct: 314 DGTVWAWGYNYNGQLGN---GIPTQRSPSIPVFGLIDVVALSAGYSHSLALRTDGTVWAW 370

Query: 241 GSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 300
           G N+ GQLG G T+ RP+P  +  L +V   V ++AG S+ LA+  +G V ++G   +  
Sbjct: 371 GYNSLGQLGDGTTIPRPSPVQVPDLTDV---VALSAGDSHSLALRTDGTVRAWGVNYSGQ 427

Query: 301 LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 360
           LG G     L P  +         VV +SAG  H +AL ++G V+ WG    G LG G  
Sbjct: 428 LGDGTTTHRLSPVQVPDL----TDVVALSAGGNHTLALRTNGTVWAWGSNSDGQLGDGTT 483

Query: 361 IDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLR 420
             +  P  +  L +   V + A    +  +   G+V+ +G    G LG    G +   L 
Sbjct: 484 TPRLSPVQMLGLTN--VVALSAGYYHSLAVHTDGTVWAWGSNSDGQLG---DGTTTHRLT 538

Query: 421 PRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 476
           P  +  L    V  +S G  H++ +   G ++ +G N  +QLG  T      P ++
Sbjct: 539 PVQVPGLT--DVVALSAGDSHSLALRTDGTVWAWGSNSSSQLGDGTTTPRGSPVQV 592



 Score = 99.4 bits (246), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 87/275 (31%), Positives = 128/275 (46%), Gaps = 21/275 (7%)

Query: 100 VEHSSDIVETSAGNMQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRIN 158
           V   +D+V  SAG+        H+L L ++ +V + G +  G LG G  T +    + + 
Sbjct: 392 VPDLTDVVALSAGDS-------HSLALRTDGTVRAWGVNYSGQLGDGTTTHR---LSPVQ 441

Query: 159 FPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPC 218
            P    VV +SA  NH   +  +G V+  G NS    G   T  P   P  V+ L     
Sbjct: 442 VPDLTDVVALSAGGNHTLALRTNGTVWAWGSNSDGQLGD-GTTTPRLSP--VQMLGLTNV 498

Query: 219 KQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGP 278
             ++AG   +  +   G V   GSN+ GQLG G T  R TP  +  L +V   V ++AG 
Sbjct: 499 VALSAGYYHSLAVHTDGTVWAWGSNSDGQLGDGTTTHRLTPVQVPGLTDV---VALSAGD 555

Query: 279 SYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
           S+ LA+  +G V+++GS S+  LG G       P  +         VV +SAG  H +AL
Sbjct: 556 SHSLALRTDGTVWAWGSNSSSQLGDGTTTPRGSPVQVPGL----TDVVALSAGGAHSLAL 611

Query: 339 DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
            + G V+ WG  Y G LG G    +  P  +S+L 
Sbjct: 612 RTDGTVWAWGSNYYGQLGDGTTTPRLFPVLVSNLT 646



 Score = 98.6 bits (244), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 104/367 (28%), Positives = 162/367 (44%), Gaps = 27/367 (7%)

Query: 114 MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           + ++ G  H+L L ++ +V++ G +  G LG+G  T +  S           VV +SA  
Sbjct: 299 VALSAGYSHSLALRTDGTVWAWGYNYNGQLGNGIPTQRSPSIPVFGL---IDVVALSAGY 355

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
           +H+  +   G V+  G NS    G   T   I RP  V+         ++AG + +  L 
Sbjct: 356 SHSLALRTDGTVWAWGYNSLGQLGDGTT---IPRPSPVQVPDLTDVVALSAGDSHSLALR 412

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
             G V   G N  GQLG G T  R +P  +  L +V   V ++AG ++ LA+  NG V++
Sbjct: 413 TDGTVRAWGVNYSGQLGDGTTTHRLSPVQVPDLTDV---VALSAGGNHTLALRTNGTVWA 469

Query: 293 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 352
           +GS S+  LG G     L P  +        +VV +SAG  H +A+ + G V+ WG    
Sbjct: 470 WGSNSDGQLGDGTTTPRLSPVQMLGL----TNVVALSAGYYHSLAVHTDGTVWAWGSNSD 525

Query: 353 GALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLG---F 409
           G LG G    +  P  +  L     V + A    +  L   G+V+ +G      LG    
Sbjct: 526 GQLGDGTTTHRLTPVQVPGLTD--VVALSAGDSHSLALRTDGTVWAWGSNSSSQLGDGTT 583

Query: 410 PDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG 469
             RG   +V  P + D      V  +S G  H++ +   G ++ +G N   QLG  T   
Sbjct: 584 TPRGSPVQV--PGLTD------VVALSAGGAHSLALRTDGTVWAWGSNYYGQLGDGTTTP 635

Query: 470 CLEPTEI 476
            L P  +
Sbjct: 636 RLFPVLV 642



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 61/203 (30%), Positives = 96/203 (47%), Gaps = 11/203 (5%)

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           +AAG S+ LA+  +G V+++GS S+  LG G       P  +         VV +SAG+ 
Sbjct: 1   MAAGYSHSLALHTDGTVWAWGSNSSGQLGDGTTTPRGSPVQVPGL----TDVVALSAGNH 56

Query: 334 HVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDT 393
           H +AL + G V+ WG    G LG G    +     +  L     V + A    T  L   
Sbjct: 57  HCLALRTDGTVWAWGSNSSGQLGDGTTTPRLSSVQVPGLTD--VVALSAGSSYTLALRTD 114

Query: 394 GSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFG 453
           G+V+ +G+  +G LG    G +   L P  +  L    V  +S+G+YH++ +   G ++ 
Sbjct: 115 GTVWAWGYNFYGQLG---DGTTTPRLAPVQVPGLT--DVVALSSGIYHSLALRTDGTVWA 169

Query: 454 FGDNERAQLGHDTLRGCLEPTEI 476
           +GDN   QLG  T    L P ++
Sbjct: 170 WGDNASGQLGDGTATRRLSPVQV 192


>gi|325180310|emb|CCA14713.1| regulator of chromosome condensation (RCC1)like protein putative
           [Albugo laibachii Nc14]
          Length = 393

 Score =  118 bits (295), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 89/316 (28%), Positives = 144/316 (45%), Gaps = 29/316 (9%)

Query: 184 VFTCGDNSSFCCGHRDTNRPIFR-------PRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
           VFT G  +    GH    +   R       PR++E  +G    ++  G   +  +   G 
Sbjct: 7   VFTWGTGTQGQLGHGSFEKTGIRSSYEELSPRILETFEGKNIAKLDFGATHSAAIDKEGK 66

Query: 237 VHTCGSNTHGQLGHGDTLD--RPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 294
           ++T GSN + QLGHG +    +  P+ +  L  +  +V I+ G  +  AV   G ++++G
Sbjct: 67  LYTWGSNEYHQLGHGSSNQDIQSIPRVVDALRGI-KIVDISCGEYHTGAVDEEGKLFTWG 125

Query: 295 SGSNF-----CLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 349
            G +       LGH    DE  PR ++T   +G+ V  V  G+ H VAL   G ++ WG 
Sbjct: 126 WGGSTMKGSGALGHAGGEDESIPRLVRTLVDQGVPVKSVECGELHTVALTKDGEIWAWGN 185

Query: 350 GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGF 409
           G  G LG+G   +  +PEP+          + A +  TF + + G VY +G      LG 
Sbjct: 186 GEYGRLGNGASDNFEVPEPVEYFADENIASISAGRDFTFAITEHGEVYSWGINSHSQLGL 245

Query: 410 PDRGVSDKV---LRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDT 466
                 D       P ++++L   +V+Q+S G  H   VT+ G++F +G    A+L    
Sbjct: 246 GGGLTVDYYNMETIPVVVEALSNVNVAQVSAGYDHAAAVTNDGKMFMWG----AKL---- 297

Query: 467 LRGCLEPTEIFIQEME 482
               LEP E+ I + E
Sbjct: 298 ---WLEPHEMTILKDE 310



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 75/249 (30%), Positives = 126/249 (50%), Gaps = 21/249 (8%)

Query: 231 LTIRGHVHTCGSNTHGQLGHG---DTLDRPTPKSIAP--LE--EVGSVVQIAAGPSYMLA 283
           ++ +  V T G+ T GQLGHG    T  R + + ++P  LE  E  ++ ++  G ++  A
Sbjct: 1   MSTQSTVFTWGTGTQGQLGHGSFEKTGIRSSYEELSPRILETFEGKNIAKLDFGATHSAA 60

Query: 284 VTGNGVVYSFGSGSNFCLGHGEQHDELQ--PRAIQTFRRKGIHVVRVSAGDEHVVALDSS 341
           +   G +Y++GS     LGHG  + ++Q  PR +   R  GI +V +S G+ H  A+D  
Sbjct: 61  IDKEGKLYTWGSNEYHQLGHGSSNQDIQSIPRVVDALR--GIKIVDISCGEYHTGAVDEE 118

Query: 342 GYVYTWGKG-----YCGALGHGDEIDKTLPEPLSSLKSH-LAVQ-VCARKRKTFVLVDTG 394
           G ++TWG G       GALGH    D+++P  + +L    + V+ V   +  T  L   G
Sbjct: 119 GKLFTWGWGGSTMKGSGALGHAGGEDESIPRLVRTLVDQGVPVKSVECGELHTVALTKDG 178

Query: 395 SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 454
            ++ +G   +G LG    G SD    P  ++     +++ IS G   T  +T+ G ++ +
Sbjct: 179 EIWAWGNGEYGRLG---NGASDNFEVPEPVEYFADENIASISAGRDFTFAITEHGEVYSW 235

Query: 455 GDNERAQLG 463
           G N  +QLG
Sbjct: 236 GINSHSQLG 244



 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 94/340 (27%), Positives = 138/340 (40%), Gaps = 66/340 (19%)

Query: 101 EHSSDIVETSAGN--MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRI 157
           E S  I+ET  G    ++  G  H+  I     +++ GS+    LGHG       S  R+
Sbjct: 34  ELSPRILETFEGKNIAKLDFGATHSAAIDKEGKLYTWGSNEYHQLGHGSSNQDIQSIPRV 93

Query: 158 -NFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSF-----CCGHRDTNRPIFRPRLVE 211
            +      +V +S  E H   V + G++FT G   S        GH         PRLV 
Sbjct: 94  VDALRGIKIVDISCGEYHTGAVDEEGKLFTWGWGGSTMKGSGALGHAGGEDESI-PRLVR 152

Query: 212 AL--KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHG--DTLDRPTPKSIAPLEE 267
            L  +GVP K V  G   T  LT  G +   G+  +G+LG+G  D  + P P      E 
Sbjct: 153 TLVDQGVPVKSVECGELHTVALTKDGEIWAWGNGEYGRLGNGASDNFEVPEPVEYFADEN 212

Query: 268 VGSVVQIAAGPSYMLAVTGNGVVYSFG--SGSNFCLGHGEQHD----ELQPRAIQTFRRK 321
           + S   I+AG  +  A+T +G VYS+G  S S   LG G   D    E  P  ++     
Sbjct: 213 IAS---ISAGRDFTFAITEHGEVYSWGINSHSQLGLGGGLTVDYYNMETIPVVVEALSN- 268

Query: 322 GIHVVRVSAGDEHVVA-----------------------------------------LDS 340
            ++V +VSAG +H  A                                         L +
Sbjct: 269 -VNVAQVSAGYDHAAAVTNDGKMFMWGAKLWLEPHEMTILKDETIISVQCGRYYTAALSA 327

Query: 341 SGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQV 380
           SG ++T+GKG+   LGHG+   +  P  + SL  +  V +
Sbjct: 328 SGNLFTFGKGHSNCLGHGERKTQLQPLLVESLNRYNVVSM 367



 Score = 69.7 bits (169), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 57/229 (24%), Positives = 107/229 (46%), Gaps = 21/229 (9%)

Query: 116 ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           +  G  HT+ L  +  +++ G+   G LG+G      V    + + +  ++  +SA  + 
Sbjct: 164 VECGELHTVALTKDGEIWAWGNGEYGRLGNGASDNFEVP-EPVEYFADENIASISAGRDF 222

Query: 175 AAFVLQSGQVFTCGDNSSFCCG-----HRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
              + + G+V++ G NS    G       D       P +VEAL  V   QV+AG +   
Sbjct: 223 TFAITEHGEVYSWGINSHSQLGLGGGLTVDYYNMETIPVVVEALSNVNVAQVSAGYDHAA 282

Query: 230 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 289
            +T  G +   G+    +           P  +  L++  +++ +  G  Y  A++ +G 
Sbjct: 283 AVTNDGKMFMWGAKLWLE-----------PHEMTILKDE-TIISVQCGRYYTAALSASGN 330

Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
           +++FG G + CLGHGE+  +LQP  +++  R   +VV ++ G  H+ AL
Sbjct: 331 LFTFGKGHSNCLGHGERKTQLQPLLVESLNR--YNVVSMTCGYSHMGAL 377


>gi|55249804|gb|AAH85921.1| Herc6 protein, partial [Rattus norvegicus]
          Length = 1034

 Score =  118 bits (295), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 80/266 (30%), Positives = 130/266 (48%), Gaps = 5/266 (1%)

Query: 206 RPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL 265
           +PR +EA  G+   +  +G   +  L     V++CG N+ GQLG         P+ I  L
Sbjct: 18  QPRRLEAGTGLKLLKAASGERHSLLLFSNHRVYSCGDNSRGQLGQKSPQSTKRPEPIQAL 77

Query: 266 EEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHD-ELQPRAIQTFRRKGIH 324
             V  +  ++ G  + +AV   G V+++G+GS   LG GE  +    P  I +    GI 
Sbjct: 78  STV-HIDLVSCGKEHSVAVCHQGRVFTWGAGSEGQLGIGESKEISFMPTKINSL--AGIK 134

Query: 325 VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEI-DKTLPEPLSSLKSHLAVQVCAR 383
           +++VS G  H +AL   G V++WG    G LG G+ +  +  P+ + SL+     QV A 
Sbjct: 135 IIQVSCGHYHSLALSEDGQVFSWGSNRQGQLGLGNNLCSQASPQKVKSLEGIPLAQVAAG 194

Query: 384 KRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV 443
              +F L   G+ +G+G    G L        +++ +P  + +L+  +V  IS G  HT 
Sbjct: 195 GTHSFALSLMGTSFGWGNNRSGQLALSGNSAKEQIYKPHSIGALKTLNVVYISCGYEHTS 254

Query: 444 VVTDRGRLFGFGDNERAQLGHDTLRG 469
           V+T+ G++F FG +   QL H    G
Sbjct: 255 VLTEDGQVFTFGGSSSEQLQHSPRSG 280



 Score = 99.4 bits (246), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 84/293 (28%), Positives = 137/293 (46%), Gaps = 11/293 (3%)

Query: 114 MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGH-GPETTQCVSFTRINFPSAAHVVQVSAS 171
           ++  +G  H+LL+ SN  V+SCG +  G LG   P++T+      I   S  H+  VS  
Sbjct: 31  LKAASGERHSLLLFSNHRVYSCGDNSRGQLGQKSPQSTK--RPEPIQALSTVHIDLVSCG 88

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
           + H+  V   G+VFT G  S    G  ++    F P  + +L G+   QV+ G   +  L
Sbjct: 89  KEHSVAVCHQGRVFTWGAGSEGQLGIGESKEISFMPTKINSLAGIKIIQVSCGHYHSLAL 148

Query: 232 TIRGHVHTCGSNTHGQLGHGDTL-DRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 290
           +  G V + GSN  GQLG G+ L  + +P+ +  LE +  + Q+AAG ++  A++  G  
Sbjct: 149 SEDGQVFSWGSNRQGQLGLGNNLCSQASPQKVKSLEGI-PLAQVAAGGTHSFALSLMGTS 207

Query: 291 YSFG---SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 347
           + +G   SG     G+  +    +P +I     K ++VV +S G EH   L   G V+T+
Sbjct: 208 FGWGNNRSGQLALSGNSAKEQIYKPHSIGAL--KTLNVVYISCGYEHTSVLTEDGQVFTF 265

Query: 348 GKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 400
           G      L H     +  P+ +  +  H++   C        +  TG V   G
Sbjct: 266 GGSSSEQLQHSPRSGRGGPQLIEGIGGHVSQIECGSYHTIAYVYTTGQVVSLG 318



 Score = 93.2 bits (230), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 82/306 (26%), Positives = 146/306 (47%), Gaps = 14/306 (4%)

Query: 156 RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 215
           R+   +   +++ ++ E H+  +  + +V++CGDNS    G + + +   RP  ++AL  
Sbjct: 21  RLEAGTGLKLLKAASGERHSLLLFSNHRVYSCGDNSRGQLGQK-SPQSTKRPEPIQALST 79

Query: 216 VPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRP-TPKSIAPLEEVGSVVQI 274
           V    V+ G   +  +  +G V T G+ + GQLG G++ +    P  I  L  +  ++Q+
Sbjct: 80  VHIDLVSCGKEHSVAVCHQGRVFTWGAGSEGQLGIGESKEISFMPTKINSLAGI-KIIQV 138

Query: 275 AAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH-DELQPRAIQTFRRKGIHVVRVSAGDE 333
           + G  + LA++ +G V+S+GS     LG G     +  P+ +++   +GI + +V+AG  
Sbjct: 139 SCGHYHSLALSEDGQVFSWGSNRQGQLGLGNNLCSQASPQKVKSL--EGIPLAQVAAGGT 196

Query: 334 HVVALDSSGYVYTWGKGYCGAL---GHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVL 390
           H  AL   G  + WG    G L   G+  +     P  + +LK+   V +      T VL
Sbjct: 197 HSFALSLMGTSFGWGNNRSGQLALSGNSAKEQIYKPHSIGALKTLNVVYISCGYEHTSVL 256

Query: 391 VDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV-VTDRG 449
            + G V+ FG      L    R        P++++ +   HVSQI  G YHT+  V   G
Sbjct: 257 TEDGQVFTFGGSSSEQLQHSPRSGRGG---PQLIEGI-GGHVSQIECGSYHTIAYVYTTG 312

Query: 450 RLFGFG 455
           ++   G
Sbjct: 313 QVVSLG 318



 Score = 55.5 bits (132), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 51/187 (27%), Positives = 77/187 (41%), Gaps = 21/187 (11%)

Query: 114 MQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +Q++ G YH+L +S +  VFS GS+  G LG G       S  ++       + QV+A  
Sbjct: 136 IQVSCGHYHSLALSEDGQVFSWGSNRQGQLGLGNNLCSQASPQKVKSLEGIPLAQVAAGG 195

Query: 173 NHAAFVLQSGQVFTCGDNSS--FCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
            H+  +   G  F  G+N S             I++P  + ALK +    ++ G   T  
Sbjct: 196 THSFALSLMGTSFGWGNNRSGQLALSGNSAKEQIYKPHSIGALKTLNVVYISCGYEHTSV 255

Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPK------------------SIAPLEEVGSVV 272
           LT  G V T G ++  QL H     R  P+                  +IA +   G VV
Sbjct: 256 LTEDGQVFTFGGSSSEQLQHSPRSGRGGPQLIEGIGGHVSQIECGSYHTIAYVYTTGQVV 315

Query: 273 QIAAGPS 279
            +  GPS
Sbjct: 316 SLGRGPS 322


>gi|348529614|ref|XP_003452308.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 [Oreochromis
           niloticus]
          Length = 1004

 Score =  118 bits (295), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 99/353 (28%), Positives = 163/353 (46%), Gaps = 12/353 (3%)

Query: 135 GSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFC 194
           G++  G LG G E          +  S   + +V     H+ F++  G V+TCG NS   
Sbjct: 5   GNAKDGQLGIGVEKNPVFEPRNCHVFSGRGLKEVGCGGQHSVFLMHDGSVYTCGSNS--- 61

Query: 195 CGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDT- 253
           CG    ++    P +V AL       V+ G   +  +  +G +   G+   GQLG G T 
Sbjct: 62  CGQLGHDKAGISPEVVGALDTQKITMVSCGRGHSMAVNEQGQLFAWGAGDGGQLGLGTTE 121

Query: 254 LDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGE-QHDELQP 312
                P+ +  L +   + Q+  G  + +A++ +G ++++G  ++  LG G+ +  +L P
Sbjct: 122 TTVRIPRLVKRLCD-HRISQVMCGNQHCVALSRDGQLFTWGQNTSGQLGLGKGEPSKLFP 180

Query: 313 RAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSL 372
             +++    GI + +++AG +H  AL  SG V+ WGK   G LG  D+ D+ +P  +  L
Sbjct: 181 HPLKSL--AGIPLAQITAGGDHSFALSLSGAVFGWGKNRAGQLGLNDKQDRAVPCHIKFL 238

Query: 373 KSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHV 432
           +S   V +      T  L   G ++ FG   +G LG    G ++  L PR +  L    V
Sbjct: 239 RSQKVVYISCGDEHTAALTKDGGLFTFGDGSWGQLG---HGSTNSELLPRRVLELMGTEV 295

Query: 433 SQISTGLYHTVV-VTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQEMEED 484
           SQI+ G +HT+  V   G ++ FG N   QLG   L     P  +      ED
Sbjct: 296 SQIACGRHHTLAFVPSSGVVYAFGCNSHGQLGTGILGDARSPFPVKTSVPSED 348



 Score =  115 bits (287), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 93/298 (31%), Positives = 132/298 (44%), Gaps = 20/298 (6%)

Query: 119 GRYHTLLISNSSVFSCGSSLCGVLGH-----GPETTQCVSFTRINFPSAAHVVQVSASEN 173
           G++   L+ + SV++CGS+ CG LGH      PE    +   +I          VS    
Sbjct: 42  GQHSVFLMHDGSVYTCGSNSCGQLGHDKAGISPEVVGALDTQKITM--------VSCGRG 93

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
           H+  V + GQ+F  G       G   T   +  PRLV+ L      QV  G      L+ 
Sbjct: 94  HSMAVNEQGQLFAWGAGDGGQLGLGTTETTVRIPRLVKRLCDHRISQVMCGNQHCVALSR 153

Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSV--VQIAAGPSYMLAVTGNGVVY 291
            G + T G NT GQLG G     P+     PL+ +  +   QI AG  +  A++ +G V+
Sbjct: 154 DGQLFTWGQNTSGQLGLGK--GEPSKLFPHPLKSLAGIPLAQITAGGDHSFALSLSGAVF 211

Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 351
            +G      LG  ++ D   P  I+  R +   VV +S GDEH  AL   G ++T+G G 
Sbjct: 212 GWGKNRAGQLGLNDKQDRAVPCHIKFLRSQ--KVVYISCGDEHTAALTKDGGLFTFGDGS 269

Query: 352 CGALGHGDEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLG 408
            G LGHG    + LP  +  L      Q+ C R      +  +G VY FG    G LG
Sbjct: 270 WGQLGHGSTNSELLPRRVLELMGTEVSQIACGRHHTLAFVPSSGVVYAFGCNSHGQLG 327


>gi|170578406|ref|XP_001894395.1| hypothetical protein [Brugia malayi]
 gi|158599034|gb|EDP36761.1| conserved hypothetical protein [Brugia malayi]
          Length = 988

 Score =  118 bits (295), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 103/356 (28%), Positives = 164/356 (46%), Gaps = 29/356 (8%)

Query: 131 VFSCGSSLCGVLGHGPETT----QCVSFTRINFPSAAH-----VVQVSASENHAAFVLQS 181
           VF C     G LG  P++     Q +   R+ + +        V  +++ E H  F+   
Sbjct: 8   VFGCAGD--GQLGFRPDSVESDAQMMIVPRLVYGAPTRQNGVIVKSIASGERHTLFLSDD 65

Query: 182 GQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCG 241
           G+V++CG N +   G        +    V     V   Q++AG + +  ++  G +   G
Sbjct: 66  GKVWSCGSNYNGELGRGGVREGSYTIYPVHISSTVSIIQISAGRSHSMAVSDDGRLFAWG 125

Query: 242 SNTHGQLG-HGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 300
           SN+HGQL   GD L   TPK +  L E    VQ+A G S+ +++ G G V+ +G  S+  
Sbjct: 126 SNSHGQLAMSGDILASDTPKRVPSLPE---TVQVACGASHTVSLNGGGRVFIWGQQSDGR 182

Query: 301 LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 360
           + H        P  ++ F    I +V++SAG+   +AL +SG ++ WGK   G LG    
Sbjct: 183 IRHS-------PAEVEIF--ISIPIVQISAGNLFTMALTASGTLFAWGKNEEGQLGDFTN 233

Query: 361 IDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLR 420
            D   P  + ++ S +AV+ C     +  L   G V+  G   FG LG      S   +R
Sbjct: 234 KDVVNPCAVPNINSVVAVE-CGDSH-SIALTHEGRVFSCGSDSFGQLGCGQPNRSQNCMR 291

Query: 421 PRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 476
              +  +   HV++I+ G  HT+VV + G++  FG N   QLGH   R  + P  I
Sbjct: 292 G--ITEMLGSHVTRIACGRCHTIVVAN-GKMHTFGLNSNGQLGHGNTRNQITPRVI 344



 Score = 96.3 bits (238), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 86/312 (27%), Positives = 131/312 (41%), Gaps = 59/312 (18%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           I +G  HTL +S+   V+SCGS+  G LG G       +   ++  S   ++Q+SA  +H
Sbjct: 52  IASGERHTLFLSDDGKVWSCGSNYNGELGRGGVREGSYTIYPVHISSTVSIIQISAGRSH 111

Query: 175 AAFVLQSGQVFTCGDNS------------------------------------------- 191
           +  V   G++F  G NS                                           
Sbjct: 112 SMAVSDDGRLFAWGSNSHGQLAMSGDILASDTPKRVPSLPETVQVACGASHTVSLNGGGR 171

Query: 192 SFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHG 251
            F  G +   R    P  VE    +P  Q++AG  FT  LT  G +   G N  GQLG  
Sbjct: 172 VFIWGQQSDGRIRHSPAEVEIFISIPIVQISAGNLFTMALTASGTLFAWGKNEEGQLGDF 231

Query: 252 DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQ 311
              D   P ++     + SVV +  G S+ +A+T  G V+S GS S   LG G      Q
Sbjct: 232 TNKDVVNPCAVP---NINSVVAVECGDSHSIALTHEGRVFSCGSDSFGQLGCG------Q 282

Query: 312 PRAIQTFRR-----KGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP 366
           P   Q   R      G HV R++ G  H + + ++G ++T+G    G LGHG+  ++  P
Sbjct: 283 PNRSQNCMRGITEMLGSHVTRIACGRCHTIVV-ANGKMHTFGLNSNGQLGHGNTRNQITP 341

Query: 367 EPLSSLKSHLAV 378
             + S+++  +V
Sbjct: 342 RVIDSVENVASV 353



 Score = 69.7 bits (169), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 71/256 (27%), Positives = 109/256 (42%), Gaps = 29/256 (11%)

Query: 234 RGHVHTCGSNTHGQLG------HGDTLDRPTPKSI--APLEEVGSVVQ-IAAGPSYMLAV 284
           R  ++  G    GQLG        D      P+ +  AP  + G +V+ IA+G  + L +
Sbjct: 3   RRQLYVFGCAGDGQLGFRPDSVESDAQMMIVPRLVYGAPTRQNGVIVKSIASGERHTLFL 62

Query: 285 TGNGVVYSFGSGSNFCLGHG---EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 341
           + +G V+S GS  N  LG G   E    + P  I +     + ++++SAG  H +A+   
Sbjct: 63  SDDGKVWSCGSNYNGELGRGGVREGSYTIYPVHISS----TVSIIQISAGRSHSMAVSDD 118

Query: 342 GYVYTWGKGYCGALG-HGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 400
           G ++ WG    G L   GD +    P+ + SL     VQV      T  L   G V+ +G
Sbjct: 119 GRLFAWGSNSHGQLAMSGDILASDTPKRVPSLPE--TVQVACGASHTVSLNGGGRVFIWG 176

Query: 401 WMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERA 460
               G +      V   +  P          + QIS G   T+ +T  G LF +G NE  
Sbjct: 177 QQSDGRIRHSPAEVEIFISIP----------IVQISAGNLFTMALTASGTLFAWGKNEEG 226

Query: 461 QLGHDTLRGCLEPTEI 476
           QLG  T +  + P  +
Sbjct: 227 QLGDFTNKDVVNPCAV 242



 Score = 63.2 bits (152), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 50/166 (30%), Positives = 81/166 (48%), Gaps = 10/166 (6%)

Query: 106 IVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHV 165
           IV+ SAGN+      +   L ++ ++F+ G +  G LG   + T          P+   V
Sbjct: 198 IVQISAGNL------FTMALTASGTLFAWGKNEEGQLG---DFTNKDVVNPCAVPNINSV 248

Query: 166 VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 225
           V V   ++H+  +   G+VF+CG +S    G    NR     R +  + G    ++  G 
Sbjct: 249 VAVECGDSHSIALTHEGRVFSCGSDSFGQLGCGQPNRSQNCMRGITEMLGSHVTRIACGR 308

Query: 226 NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSV 271
             T  +   G +HT G N++GQLGHG+T ++ TP+ I  +E V SV
Sbjct: 309 CHT-IVVANGKMHTFGLNSNGQLGHGNTRNQITPRVIDSVENVASV 353


>gi|2244793|emb|CAB10216.1| disease resistance N like protein [Arabidopsis thaliana]
 gi|7268142|emb|CAB78479.1| disease resistance N like protein [Arabidopsis thaliana]
          Length = 1996

 Score =  118 bits (295), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 93/311 (29%), Positives = 141/311 (45%), Gaps = 18/311 (5%)

Query: 166  VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 225
            + ++    H A V + G+VFT  + +    GH      + RP+LVE L       V  G 
Sbjct: 1205 IDIACGVRHIALVTRQGEVFTWEEEAGGRLGH-GIQVDVCRPKLVEFLALTNIDFVACGE 1263

Query: 226  NFTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
              T  ++  G + T G   H  G LGHG  L    PK ++   E   V+ +A G  +   
Sbjct: 1264 YHTCAVSTSGDLFTWGDGIHNVGLLGHGSDLSHWIPKRVSGPVEGLQVLSVACGTWHSAL 1323

Query: 284  VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL----- 338
             T NG +++FG G+   LGHG++     P+ ++     G+  ++V+ G  H VA+     
Sbjct: 1324 ATANGKLFTFGDGAFGVLGHGDRESVSYPKEVKML--SGLKTLKVACGVWHTVAIVEVMN 1381

Query: 339  -----DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDT 393
                  SS  ++TWG G    LGHG++    LP  +SSL  +   Q+      T  L  +
Sbjct: 1382 QTGTSTSSRKLFTWGDGDKNRLGHGNKETYLLPTCVSSLIDYNFNQIACGHTFTVALTTS 1441

Query: 394  GSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFG 453
            G V+  G    G LG  +   SD  L   + D L    V +IS G +H  V+T R  +F 
Sbjct: 1442 GHVFTMGGTSHGQLGSSN---SDGKLPCLVQDRLVGEFVEEISCGDHHVAVLTSRSEVFT 1498

Query: 454  FGDNERAQLGH 464
            +G     +LGH
Sbjct: 1499 WGKGSNGRLGH 1509



 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 85/272 (31%), Positives = 133/272 (48%), Gaps = 19/272 (6%)

Query: 116  ITTGRYHTLLISNS-SVFSCGSSL--CGVLGHGPETTQCVSFTRINFP-SAAHVVQVSAS 171
            +  G YHT  +S S  +F+ G  +   G+LGHG + +  +   R++ P     V+ V+  
Sbjct: 1259 VACGEYHTCAVSTSGDLFTWGDGIHNVGLLGHGSDLSHWIP-KRVSGPVEGLQVLSVACG 1317

Query: 172  ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG------- 224
              H+A    +G++FT GD +    GH D    +  P+ V+ L G+   +V  G       
Sbjct: 1318 TWHSALATANGKLFTFGDGAFGVLGHGD-RESVSYPKEVKMLSGLKTLKVACGVWHTVAI 1376

Query: 225  ---LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 281
               +N TG  T    + T G     +LGHG+      P  ++ L +  +  QIA G ++ 
Sbjct: 1377 VEVMNQTGTSTSSRKLFTWGDGDKNRLGHGNKETYLLPTCVSSLIDY-NFNQIACGHTFT 1435

Query: 282  LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 341
            +A+T +G V++ G  S+  LG      +L P  +Q  R  G  V  +S GD HV  L S 
Sbjct: 1436 VALTTSGHVFTMGGTSHGQLGSSNSDGKL-PCLVQD-RLVGEFVEEISCGDHHVAVLTSR 1493

Query: 342  GYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
              V+TWGKG  G LGHGD+ D+  P  + +L+
Sbjct: 1494 SEVFTWGKGSNGRLGHGDKDDRKTPTLVEALR 1525



 Score = 85.5 bits (210), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 95/370 (25%), Positives = 154/370 (41%), Gaps = 37/370 (10%)

Query: 106  IVETSAGNMQITTGRYHTLLISNS-SVFSCGSSLCGVLGHG-------PETTQCVSFTRI 157
            +V ++   + I  G  H  L++    VF+      G LGHG       P+  + ++ T I
Sbjct: 1197 VVNSTTVKIDIACGVRHIALVTRQGEVFTWEEEAGGRLGHGIQVDVCRPKLVEFLALTNI 1256

Query: 158  NFPSAAHVVQVSASENHAAFVLQSGQVFTCGD--NSSFCCGHRDTNRPIFRPRLVEALKG 215
            +F        V+  E H   V  SG +FT GD  ++    GH          R+   ++G
Sbjct: 1257 DF--------VACGEYHTCAVSTSGDLFTWGDGIHNVGLLGHGSDLSHWIPKRVSGPVEG 1308

Query: 216  VPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA 275
            +    V  G   +   T  G + T G    G LGHGD      PK +  L  + + +++A
Sbjct: 1309 LQVLSVACGTWHSALATANGKLFTFGDGAFGVLGHGDRESVSYPKEVKMLSGLKT-LKVA 1367

Query: 276  AGPSYMLAV----------TGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHV 325
             G  + +A+          T +  ++++G G    LGHG +   L P  + +      + 
Sbjct: 1368 CGVWHTVAIVEVMNQTGTSTSSRKLFTWGDGDKNRLGHGNKETYLLPTCVSSLIDYNFN- 1426

Query: 326  VRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSS-LKSHLAVQVCARK 384
             +++ G    VAL +SG+V+T G    G LG  +  D  LP  +   L      ++    
Sbjct: 1427 -QIACGHTFTVALTTSGHVFTMGGTSHGQLGSSNS-DGKLPCLVQDRLVGEFVEEISCGD 1484

Query: 385  RKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV 444
                VL     V+ +G    G LG  D+   D    P ++++LR  HV  IS G   +V 
Sbjct: 1485 HHVAVLTSRSEVFTWGKGSNGRLGHGDK---DDRKTPTLVEALRERHVKSISCGADQSVC 1541

Query: 445  VTDRGRLFGF 454
               R + FGF
Sbjct: 1542 SGCR-QAFGF 1550



 Score = 82.0 bits (201), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 81/293 (27%), Positives = 128/293 (43%), Gaps = 27/293 (9%)

Query: 114  MQITTGRYHTLL-ISNSSVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSAS 171
            + +  G +H+ L  +N  +F+ G    GVLGHG    + VS+ + +   S    ++V+  
Sbjct: 1312 LSVACGTWHSALATANGKLFTFGDGAFGVLGHGDR--ESVSYPKEVKMLSGLKTLKVACG 1369

Query: 172  ENHAAFVLQ----------SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQV 221
              H   +++          S ++FT GD      GH +    +  P  V +L      Q+
Sbjct: 1370 VWHTVAIVEVMNQTGTSTSSRKLFTWGDGDKNRLGHGNKETYLL-PTCVSSLIDYNFNQI 1428

Query: 222  TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ-IAAGPSY 280
              G  FT  LT  GHV T G  +HGQLG  ++ D   P  +     VG  V+ I+ G  +
Sbjct: 1429 ACGHTFTVALTTSGHVFTMGGTSHGQLGSSNS-DGKLP-CLVQDRLVGEFVEEISCGDHH 1486

Query: 281  MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG-DEHVVALD 339
            +  +T    V+++G GSN  LGHG++ D   P  ++  R +  HV  +S G D+ V +  
Sbjct: 1487 VAVLTSRSEVFTWGKGSNGRLGHGDKDDRKTPTLVEALRER--HVKSISCGADQSVCSGC 1544

Query: 340  SSGYVYTWGKGYCGALG----HGDEIDKTLPEPLSSL--KSHLAVQVCARKRK 386
               + +T  +  C   G    H     K L   L+    K H     C  K K
Sbjct: 1545 RQAFGFTRKRHNCYNCGLVHCHACSSKKALKAALAPTPGKPHRVCDACYTKLK 1597



 Score = 81.6 bits (200), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 62/216 (28%), Positives = 102/216 (47%), Gaps = 18/216 (8%)

Query: 272  VQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG 331
            + IA G  ++  VT  G V+++   +   LGHG Q D  +P+ ++      I  V  + G
Sbjct: 1205 IDIACGVRHIALVTRQGEVFTWEEEAGGRLGHGIQVDVCRPKLVEFLALTNIDFV--ACG 1262

Query: 332  DEHVVALDSSGYVYTWGKGY--CGALGHGDEIDKTLPEPLSSLKSHLAV-QVCARKRKTF 388
            + H  A+ +SG ++TWG G    G LGHG ++   +P+ +S     L V  V      + 
Sbjct: 1263 EYHTCAVSTSGDLFTWGDGIHNVGLLGHGSDLSHWIPKRVSGPVEGLQVLSVACGTWHSA 1322

Query: 389  VLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVV--- 445
            +    G ++ FG   FG LG  DR   + V  P+ +  L      +++ G++HTV +   
Sbjct: 1323 LATANGKLFTFGDGAFGVLGHGDR---ESVSYPKEVKMLSGLKTLKVACGVWHTVAIVEV 1379

Query: 446  -------TDRGRLFGFGDNERAQLGHDTLRGCLEPT 474
                   T   +LF +GD ++ +LGH      L PT
Sbjct: 1380 MNQTGTSTSSRKLFTWGDGDKNRLGHGNKETYLLPT 1415


>gi|340505900|gb|EGR32173.1| regulator of chromosome condensation, putative [Ichthyophthirius
           multifiliis]
          Length = 427

 Score =  118 bits (295), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 93/398 (23%), Positives = 179/398 (44%), Gaps = 38/398 (9%)

Query: 90  WKRVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLISNS----SVFSCGSSLCGVLGHG 145
           ++++  F +   ++  +   S   + +T+G +   + +++    +V++ G    G LG  
Sbjct: 3   YQKMYNFFKQKTNTKRLFTAS---LLVTSGFFAQSIFTDTPPQKTVYAWGYGNFGQLGLA 59

Query: 146 PETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRD-TNRPI 204
            E  Q  S   +   S  ++++V A+++ +  + Q G+V+T G N     GH D T+  +
Sbjct: 60  NENNQ-YSPQEVEKLSDRNIIKVKANKSVSMALSQDGKVYTWGKNKGGILGHYDITSFNM 118

Query: 205 FRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGH-------------- 250
            +P LVE L+ +  KQ++ G      ++  G ++T G+  HG+LGH              
Sbjct: 119 IQPELVEKLENIQIKQISCGPFHMAAISQDGELYTWGNKDHGKLGHEIQQKSNKVEIKRG 178

Query: 251 GDTLDRPT----PKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH-GE 305
               D       P  +  L  +    Q++ G  + + +T NG VYSFG+     LG+  E
Sbjct: 179 NQNYDYAEGSMLPTKVQSLNGI-KCKQVSCGGQFTVVLTENGEVYSFGNSMKGQLGYQSE 237

Query: 306 QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTL 365
           +    QP+ I   +    +++ +  G +   A+ SSG VYTWG    G LG+   I +  
Sbjct: 238 ETGNFQPKKIPDLQ----NIINIDCGQQFSAAVSSSGKVYTWGNNDHGQLGNNQSIYQAR 293

Query: 366 PEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILD 425
           P  ++    +  + +         L + G ++ +G+   G LG  +R   + +  P+ ++
Sbjct: 294 PNQVTGFGGNKIINISCGDNFIAALSNEGKLFTWGYGNDGQLGHSNR---NDLYAPKQIE 350

Query: 426 SLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 463
                 + ++  G  HT  +T   +L+ FG     QLG
Sbjct: 351 --FKEKIIKVDCGGTHTAFLTQNNQLYLFGRGNEGQLG 386



 Score = 92.8 bits (229), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 65/227 (28%), Positives = 110/227 (48%), Gaps = 17/227 (7%)

Query: 119 GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
           G++  +L  N  V+S G+S+ G LG+  E T   +F     P   +++ +   +  +A V
Sbjct: 209 GQFTVVLTENGEVYSFGNSMKGQLGYQSEETG--NFQPKKIPDLQNIINIDCGQQFSAAV 266

Query: 179 LQSGQVFTCGDNSSFCCGHRDTNRPIF--RPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
             SG+V+T G+N     G    N+ I+  RP  V    G     ++ G NF   L+  G 
Sbjct: 267 SSSGKVYTWGNNDH---GQLGNNQSIYQARPNQVTGFGGNKIINISCGDNFIAALSNEGK 323

Query: 237 VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 296
           + T G    GQLGH +  D   PK I   E++   +++  G ++   +T N  +Y FG G
Sbjct: 324 LFTWGYGNDGQLGHSNRNDLYAPKQIEFKEKI---IKVDCGGTHTAFLTQNNQLYLFGRG 380

Query: 297 SNFCLGHGEQHD-----ELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
           +   LG GE  +        P+ ++ F++  + VV V+ G E+ +A+
Sbjct: 381 NEGQLGIGENIESEAAIRTTPKIVEFFKK--MKVVDVTCGGEYTLAI 425



 Score = 91.7 bits (226), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 79/297 (26%), Positives = 134/297 (45%), Gaps = 29/297 (9%)

Query: 205 FRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGD--TLDRPTPKSI 262
           + P+ VE L      +V A  + +  L+  G V+T G N  G LGH D  + +   P+ +
Sbjct: 65  YSPQEVEKLSDRNIIKVKANKSVSMALSQDGKVYTWGKNKGGILGHYDITSFNMIQPELV 124

Query: 263 APLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH-------------GEQHDE 309
             LE +  + QI+ GP +M A++ +G +Y++G+  +  LGH             G Q+ +
Sbjct: 125 EKLENI-QIKQISCGPFHMAAISQDGELYTWGNKDHGKLGHEIQQKSNKVEIKRGNQNYD 183

Query: 310 -----LQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH-GDEIDK 363
                + P  +Q+    GI   +VS G +  V L  +G VY++G    G LG+  +E   
Sbjct: 184 YAEGSMLPTKVQSLN--GIKCKQVSCGGQFTVVLTENGEVYSFGNSMKGQLGYQSEETGN 241

Query: 364 TLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRI 423
             P+ +  L++ + +  C ++    V   +G VY +G    G LG      S    RP  
Sbjct: 242 FQPKKIPDLQNIINID-CGQQFSAAV-SSSGKVYTWGNNDHGQLG---NNQSIYQARPNQ 296

Query: 424 LDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQE 480
           +     + +  IS G      +++ G+LF +G     QLGH        P +I  +E
Sbjct: 297 VTGFGGNKIINISCGDNFIAALSNEGKLFTWGYGNDGQLGHSNRNDLYAPKQIEFKE 353



 Score = 78.2 bits (191), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 55/206 (26%), Positives = 95/206 (46%), Gaps = 20/206 (9%)

Query: 289 VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 348
            VY++G G+   LG   ++++  P+ ++    +  ++++V A     +AL   G VYTWG
Sbjct: 44  TVYAWGYGNFGQLGLANENNQYSPQEVEKLSDR--NIIKVKANKSVSMALSQDGKVYTWG 101

Query: 349 KGYCGALGHGD--EIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGS 406
           K   G LGH D    +   PE +  L++    Q+         +   G +Y +G    G 
Sbjct: 102 KNKGGILGHYDITSFNMIQPELVEKLENIQIKQISCGPFHMAAISQDGELYTWGNKDHGK 161

Query: 407 LGFPDRGVSDKV---------------LRPRILDSLRAHHVSQISTGLYHTVVVTDRGRL 451
           LG   +  S+KV               + P  + SL      Q+S G   TVV+T+ G +
Sbjct: 162 LGHEIQQKSNKVEIKRGNQNYDYAEGSMLPTKVQSLNGIKCKQVSCGGQFTVVLTENGEV 221

Query: 452 FGFGDNERAQLGHDTLR-GCLEPTEI 476
           + FG++ + QLG+ +   G  +P +I
Sbjct: 222 YSFGNSMKGQLGYQSEETGNFQPKKI 247


>gi|119578071|gb|EAW57667.1| hCG2006901, isoform CRA_d [Homo sapiens]
          Length = 1677

 Score =  118 bits (295), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 92/311 (29%), Positives = 151/311 (48%), Gaps = 24/311 (7%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V Q++ +E     + ++G+V+T   NS       DT      P+LV+ L      ++ A 
Sbjct: 444 VTQIACAEKRFLILSRNGRVYTQAYNS-------DT----LAPQLVQGLASRNIVKIAAH 492

Query: 225 LNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGS-VVQIAAGPS 279
            +   +L +   G V++ G    G+LGHGDT+    PK I+    ++ G  VV IA G +
Sbjct: 493 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGST 552

Query: 280 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS--AGDEHVVA 337
           Y  A+T  G +Y++G G+   LGHG   DE  P  +     KG+ V+ V+  +GD   +A
Sbjct: 553 YSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGL--KGLKVIDVACGSGDAQTLA 610

Query: 338 LDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVY 397
           +  +G V++WG G  G LG G       P+ +  L+    V+V    + +  L   G VY
Sbjct: 611 VTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVY 670

Query: 398 GFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDN 457
            +G      LG    G  + V  P++L+ L+   V  ++ G  H + +T+   +  +G N
Sbjct: 671 SWGKGDNQRLG---HGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSN 727

Query: 458 ERAQLGHDTLR 468
           ++ Q   DTLR
Sbjct: 728 DQCQ-HFDTLR 737



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 88/328 (26%), Positives = 149/328 (45%), Gaps = 26/328 (7%)

Query: 50  PQKFRSLVDLAASQLCALHSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVET 109
           P +   L +L  +Q+      +  +SRN ++    +   +     + +Q +  S +IV+ 
Sbjct: 433 PIQCEGLANLGVTQIACAEKRFLILSRNGRV--YTQAYNSDTLAPQLVQGLA-SRNIVKI 489

Query: 110 SAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSA 162
           +A     + G ++  L +   V+S G    G LGHG       P+     S  +    + 
Sbjct: 490 AAH----SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQ----AG 541

Query: 163 AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 222
            HVV ++    ++A +   G+++T G  +    GH  +      P LV  LKG+    V 
Sbjct: 542 KHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVA 600

Query: 223 AGLNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 280
            G      L +   G V + G   +G+LG G +    TPK I  L+++  VV++  G  +
Sbjct: 601 CGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL-DVVKVRCGSQF 659

Query: 281 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 340
            +A+T +G VYS+G G N  LGHG +     P+ ++    +G  V+ V+AG  H +AL  
Sbjct: 660 SIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGL--QGKKVIDVAAGSTHCLALTE 717

Query: 341 SGYVYTWGKGYCGALGHGDEIDKTLPEP 368
              V++WG        H D +  T PEP
Sbjct: 718 DSEVHSWGSN--DQCQHFDTLRVTKPEP 743



 Score = 76.3 bits (186), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 58/212 (27%), Positives = 95/212 (44%), Gaps = 19/212 (8%)

Query: 271 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 330
           V QIA      L ++ NG VY+    S          D L P+ +Q    + I  +   +
Sbjct: 444 VTQIACAEKRFLILSRNGRVYTQAYNS----------DTLAPQLVQGLASRNIVKIAAHS 493

Query: 331 GDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLA----VQVCARKRK 386
              H +AL ++G VY+WG G  G LGHGD +    P+ +S+     A    V +      
Sbjct: 494 DGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTY 553

Query: 387 TFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVV 444
           +  +   G +Y +G   +G LG    G S+    P ++  L+   V  ++  +G   T+ 
Sbjct: 554 SAAITAEGELYTWGRGNYGRLG---HGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLA 610

Query: 445 VTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 476
           VT+ G+++ +GD +  +LG     GC  P  I
Sbjct: 611 VTENGQVWSWGDGDYGKLGRGGSDGCKTPKLI 642



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 52/169 (30%), Positives = 76/169 (44%), Gaps = 8/169 (4%)

Query: 118 TGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
           +G   TL ++ N  V+S G    G LG G  +  C +   I       VV+V      + 
Sbjct: 603 SGDAQTLAVTENGQVWSWGDGDYGKLGRG-GSDGCKTPKLIEKLQDLDVVKVRCGSQFSI 661

Query: 177 FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
            + + GQV++ G   +   GH  T   +  P+L+E L+G     V AG      LT    
Sbjct: 662 ALTKDGQVYSWGKGDNQRLGH-GTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSE 720

Query: 237 VHTCGSNTHGQLGHGDTL--DRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
           VH+ GSN   Q  H DTL   +P P ++  L +   +V IA GP+   A
Sbjct: 721 VHSWGSNDQCQ--HFDTLRVTKPEPAALPGL-DTKHIVGIACGPAQSFA 766


>gi|12325184|gb|AAG52535.1|AC013289_2 putative regulator of chromosome condensation; 48393-44372
           [Arabidopsis thaliana]
          Length = 1028

 Score =  118 bits (295), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 104/386 (26%), Positives = 166/386 (43%), Gaps = 28/386 (7%)

Query: 119 GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN----- 173
           G YH    +   VF  G S+   +  G   +   +      P A     V  ++N     
Sbjct: 237 GSYHEDFDALGDVFVWGESISDGVLSGTGNSLNSTTEDALLPKALESTIVLDAQNIACGK 296

Query: 174 -HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            HA  V + G++F+ G+                +P+ + +++G+  K +  G   T  +T
Sbjct: 297 CHAVLVTKQGEIFSWGEGKGGK-LGHGLETDAQKPKFISSVRGLGFKSLACGDFHTCAIT 355

Query: 233 IRGHVHTCGSNTHGQ--LGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 290
             G +++ G  TH    LGHG+      PK +    +   V  +A GP +   V  +G +
Sbjct: 356 QSGDLYSWGDGTHNVDLLGHGNESSCWIPKRVTGDLQGLYVSDVACGPWHTAVVASSGQL 415

Query: 291 YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL------------ 338
           ++FG G+   LGHG++     PR +++    G+ V +V+ G  H  A+            
Sbjct: 416 FTFGDGTFGALGHGDRRSTSVPREVESL--IGLIVTKVACGVWHTAAVVEVTNEASEAEV 473

Query: 339 DSS-GYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVY 397
           DSS G V+TWG G  G LGHGD   K LPE + SL +    QV      T      G VY
Sbjct: 474 DSSRGQVFTWGDGEKGQLGHGDNDTKLLPECVISLTNENICQVACGHSLTVSRTSRGHVY 533

Query: 398 GFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDN 457
             G   +G LG P    +      R+   +    V +I+ G YH  V+T +  ++ +G  
Sbjct: 534 TMGSTAYGQLGNP---TAKGNFPERVEGDIVEASVEEIACGSYHVAVLTSKSEIYTWGKG 590

Query: 458 ERAQLGHDTLRGCLEPTEI-FIQEME 482
              QLGH  +    EP  + F++E +
Sbjct: 591 LNGQLGHGNVENKREPAVVGFLREKQ 616



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 73/250 (29%), Positives = 111/250 (44%), Gaps = 31/250 (12%)

Query: 101 EHSSDIVETSAGNMQ------ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVS 153
           E S  I +   G++Q      +  G +HT ++++S  +F+ G    G LGHG   +  V 
Sbjct: 378 ESSCWIPKRVTGDLQGLYVSDVACGPWHTAVVASSGQLFTFGDGTFGALGHGDRRSTSVP 437

Query: 154 ----------FTRI--NFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTN 201
                      T++       A VV+V+   + A      GQVFT GD      GH D +
Sbjct: 438 REVESLIGLIVTKVACGVWHTAAVVEVTNEASEAEVDSSRGQVFTWGDGEKGQLGHGDND 497

Query: 202 RPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKS 261
             +  P  V +L      QV  G + T   T RGHV+T GS  +GQLG+      PT K 
Sbjct: 498 TKLL-PECVISLTNENICQVACGHSLTVSRTSRGHVYTMGSTAYGQLGN------PTAKG 550

Query: 262 IAPLEEVGSVVQ-----IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQ 316
             P    G +V+     IA G  ++  +T    +Y++G G N  LGHG   ++ +P  + 
Sbjct: 551 NFPERVEGDIVEASVEEIACGSYHVAVLTSKSEIYTWGKGLNGQLGHGNVENKREPAVVG 610

Query: 317 TFRRKGIHVV 326
             R K +  +
Sbjct: 611 FLREKQVKAI 620



 Score = 64.3 bits (155), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 112/443 (25%), Positives = 176/443 (39%), Gaps = 51/443 (11%)

Query: 26  RLSAVDLAHLELTSKTFGGSHGLYPQKFRSLVDLAASQLCALHSIYAGMSRNVQIELLNR 85
           R S  D   L L+S     SHG Y + F +L D+          + +G          N 
Sbjct: 216 RFSTNDPFRLSLSSAVSTSSHGSYHEDFDALGDVFVWGESISDGVLSGTG--------NS 267

Query: 86  CNGNWKRVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLISNS-SVFSCGSSLCGVLGH 144
            N   +  L  L     S+ +++       I  G+ H +L++    +FS G    G LGH
Sbjct: 268 LNSTTEDAL--LPKALESTIVLDA----QNIACGKCHAVLVTKQGEIFSWGEGKGGKLGH 321

Query: 145 GPET----TQCVSFTR-INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFC--CGH 197
           G ET     + +S  R + F S A        + H   + QSG +++ GD +      GH
Sbjct: 322 GLETDAQKPKFISSVRGLGFKSLA------CGDFHTCAITQSGDLYSWGDGTHNVDLLGH 375

Query: 198 RDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRP 257
            + +      R+   L+G+    V  G   T  +   G + T G  T G LGHGD     
Sbjct: 376 GNESSCWIPKRVTGDLQGLYVSDVACGPWHTAVVASSGQLFTFGDGTFGALGHGDRRSTS 435

Query: 258 TPKSIAPLEEVGSVV-QIAAGPSYMLAV-------------TGNGVVYSFGSGSNFCLGH 303
            P+ +  L  +G +V ++A G  +  AV             +  G V+++G G    LGH
Sbjct: 436 VPREVESL--IGLIVTKVACGVWHTAAVVEVTNEASEAEVDSSRGQVFTWGDGEKGQLGH 493

Query: 304 GEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK 363
           G+   +L P  + +   + I   +V+ G    V+  S G+VYT G    G LG+      
Sbjct: 494 GDNDTKLLPECVISLTNENI--CQVACGHSLTVSRTSRGHVYTMGSTAYGQLGN-PTAKG 550

Query: 364 TLPEPLSSLKSHLAV-QVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPR 422
             PE +       +V ++        VL     +Y +G    G LG    G  +    P 
Sbjct: 551 NFPERVEGDIVEASVEEIACGSYHVAVLTSKSEIYTWGKGLNGQLG---HGNVENKREPA 607

Query: 423 ILDSLRAHHVSQISTGLYHTVVV 445
           ++  LR   V  I+ G   T V+
Sbjct: 608 VVGFLREKQVKAITCGSNFTAVI 630


>gi|145528624|ref|XP_001450106.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124417706|emb|CAK82709.1| unnamed protein product [Paramecium tetraurelia]
          Length = 387

 Score =  117 bits (294), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 100/336 (29%), Positives = 156/336 (46%), Gaps = 29/336 (8%)

Query: 145 GPETTQCVSFTR--------INFPSA---AHVVQVSASENHAAFVLQSGQVFTCGDNSSF 193
           G E+T C++  R        I  P       + Q++AS+ H  F     QVF CG N   
Sbjct: 28  GAESTFCITIQRKVFMWGSGIQIPQQLDLQEIEQIAASKEHW-FAWSETQVFGCGSNKQG 86

Query: 194 CCGHRDT-NRPIFRPRLVEALK-GVPCKQVTAGLNFTGFLTI---RGHVHTCGSNTHGQL 248
             G  ++ N P       EA + G   +++  GL+ +  L        +   GSNT+ QL
Sbjct: 87  KLGMNNSVNTPTLFDIFSEASQYGWQLQKIAVGLDHSVALIEVEEENKIFVWGSNTYQQL 146

Query: 249 GHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHD 308
           G   +            + +  +V I A  +Y +A+   G ++S+GS     LG      
Sbjct: 147 GFDASEQFVAIPHQLDSDNLPRIVDIYAQHNYTMAIDEEGRIFSWGSNEFGRLGQNAFAK 206

Query: 309 ELQ-PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPE 367
            ++ P  I +     I   +++ G  HV+A+D+ G +Y+WG+G  G LGHG+  D   P 
Sbjct: 207 CMKLPSPITSLGNAKI--AKLALGTFHVLAIDTQGNLYSWGRGLQGQLGHGNSNDCNKPT 264

Query: 368 PLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSL 427
            +SSL++    +V   +  +  L + GSVY FG   FG LG  D    D    P++L   
Sbjct: 265 QISSLQA--IREVTCGEAHSMALQNNGSVYVFGSGQFGQLGLGDYKQQDT---PQMLQI- 318

Query: 428 RAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 463
              H   I+ G +H+ V+T  G LF FG+NE++QLG
Sbjct: 319 ---HGEMIACGRHHSGVLTKNGALFMFGNNEQSQLG 351



 Score = 86.7 bits (213), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 75/294 (25%), Positives = 132/294 (44%), Gaps = 19/294 (6%)

Query: 115 QITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPS--AAHVVQVSASE 172
           QI   + H    S + VF CGS+  G LG          F   +  S     + +++   
Sbjct: 61  QIAASKEHWFAWSETQVFGCGSNKQGKLGMNNSVNTPTLFDIFSEASQYGWQLQKIAVGL 120

Query: 173 NHAAFVL---QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
           +H+  ++   +  ++F  G N+    G   + + +  P  +++        + A  N+T 
Sbjct: 121 DHSVALIEVEEENKIFVWGSNTYQQLGFDASEQFVAIPHQLDSDNLPRIVDIYAQHNYTM 180

Query: 230 FLTIRGHVHTCGSNTHGQLGH---GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTG 286
            +   G + + GSN  G+LG       +  P+P  I  L     + ++A G  ++LA+  
Sbjct: 181 AIDEEGRIFSWGSNEFGRLGQNAFAKCMKLPSP--ITSLGNA-KIAKLALGTFHVLAIDT 237

Query: 287 NGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYT 346
            G +YS+G G    LGHG  +D  +P  I + +     +  V+ G+ H +AL ++G VY 
Sbjct: 238 QGNLYSWGRGLQGQLGHGNSNDCNKPTQISSLQA----IREVTCGEAHSMALQNNGSVYV 293

Query: 347 WGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 400
           +G G  G LG GD   +  P+    L+ H  +  C R   + VL   G+++ FG
Sbjct: 294 FGSGQFGQLGLGDYKQQDTPQ---MLQIHGEMIACGR-HHSGVLTKNGALFMFG 343



 Score = 65.9 bits (159), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 53/217 (24%), Positives = 93/217 (42%), Gaps = 12/217 (5%)

Query: 267 EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFR---RKGI 323
           ++  + QIAA   +  A +   V   FG GSN     G  +    P     F    + G 
Sbjct: 55  DLQEIEQIAASKEHWFAWSETQV---FGCGSNKQGKLGMNNSVNTPTLFDIFSEASQYGW 111

Query: 324 HVVRVSAGDEHVVAL---DSSGYVYTWGKGYCGALG-HGDEIDKTLPEPLSSLKSHLAVQ 379
            + +++ G +H VAL   +    ++ WG      LG    E    +P  L S      V 
Sbjct: 112 QLQKIAVGLDHSVALIEVEEENKIFVWGSNTYQQLGFDASEQFVAIPHQLDSDNLPRIVD 171

Query: 380 VCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGL 439
           + A+   T  + + G ++ +G   FG LG      +  +  P  + SL    +++++ G 
Sbjct: 172 IYAQHNYTMAIDEEGRIFSWGSNEFGRLG--QNAFAKCMKLPSPITSLGNAKIAKLALGT 229

Query: 440 YHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 476
           +H + +  +G L+ +G   + QLGH     C +PT+I
Sbjct: 230 FHVLAIDTQGNLYSWGRGLQGQLGHGNSNDCNKPTQI 266


>gi|282722854|gb|ADA84473.1| retinitis pigmentosa GTPase regulator protein 2 1-17 isoform [Danio
           rerio]
          Length = 708

 Score =  117 bits (294), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 94/329 (28%), Positives = 151/329 (45%), Gaps = 20/329 (6%)

Query: 146 PETTQCVSFTRINFPSAAHV---------VQVSASENHAAFVLQSGQVFTCGDNSSFCCG 196
           PE+    +F +  F   A           +++S  + H A V ++G++F  G N+    G
Sbjct: 10  PESGAVFTFGKSKFADNAPSKFWLKNDVPLRISCGDEHTALVTENGKLFMFGSNNWGQLG 69

Query: 197 HRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDR 256
              T   + +P  V+AL+    K    G   T   T RG+++ CG N  GQLG GD  DR
Sbjct: 70  -LGTKTTVNKPTCVKALRSERVKLTACGRTHTLVFTSRGNLYACGGNNEGQLGLGDCNDR 128

Query: 257 PTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQ 316
            +   +    + G +  +AAG +   A+T +G +Y  G  S   +G G++ + L P+ + 
Sbjct: 129 TSFHLVEFFNKQGPIKMLAAGSNTSAALTQDGRLYMRGDNSEGQIGLGKESNALTPQEVS 188

Query: 317 TFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE--IDKTLPEPLSSLKS 374
             +R    V  VS G  H   +   G +YT+G+   G LG   E   +  +P+ ++ +  
Sbjct: 189 VGKR----VFWVSCGYYHSAFVTVDGALYTFGEKDSGKLGLSTEKLANHKVPQQVTDIPD 244

Query: 375 HLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQ 434
            + VQV      T  L +   VY FG   FG LG        ++  PR+++  R   V  
Sbjct: 245 RV-VQVACGGGHTVALTEN-EVYSFGLGQFGQLGHGTFIFESRL--PRVVEHFRKGRVKH 300

Query: 435 ISTGLYHTVVVTDRGRLFGFGDNERAQLG 463
            + G  HT ++TD G L+ FGD    +LG
Sbjct: 301 AACGENHTALITDNGLLYTFGDGRHGKLG 329



 Score = 95.5 bits (236), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 101/346 (29%), Positives = 157/346 (45%), Gaps = 33/346 (9%)

Query: 114 MQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETT----QCVSFTRINFPSAAHVVQV 168
           ++I+ G  HT L++ N  +F  GS+  G LG G +TT     CV   R     +  V   
Sbjct: 39  LRISCGDEHTALVTENGKLFMFGSNNWGQLGLGTKTTVNKPTCVKALR-----SERVKLT 93

Query: 169 SASENHAAFVLQSGQVFTCGDNSSFCCGHRDTN-RPIFRPRLVEAL-KGVPCKQVTAGLN 226
           +    H       G ++ CG N+    G  D N R  F   LVE   K  P K + AG N
Sbjct: 94  ACGRTHTLVFTSRGNLYACGGNNEGQLGLGDCNDRTSF--HLVEFFNKQGPIKMLAAGSN 151

Query: 227 FTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS-VVQIAAGPSYMLAVT 285
            +  LT  G ++  G N+ GQ+G G   +  TP+ ++    VG  V  ++ G  +   VT
Sbjct: 152 TSAALTQDGRLYMRGDNSEGQIGLGKESNALTPQEVS----VGKRVFWVSCGYYHSAFVT 207

Query: 286 GNGVVYSFGSGSNFCLGHGEQH--DELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 343
            +G +Y+FG   +  LG   +   +   P+ +     +   VV+V+ G  H VAL +   
Sbjct: 208 VDGALYTFGEKDSGKLGLSTEKLANHKVPQQVTDIPDR---VVQVACGGGHTVAL-TENE 263

Query: 344 VYTWGKGYCGALGHGDEI-DKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWM 402
           VY++G G  G LGHG  I +  LP  +   +          +  T ++ D G +Y FG  
Sbjct: 264 VYSFGLGQFGQLGHGTFIFESRLPRVVEHFRKGRVKHAACGENHTALITDNGLLYTFGDG 323

Query: 403 GFGSLGFPDRGVSDK---VLRPRILDSLRAHHVSQISTGLYHTVVV 445
             G LG  +   +++    L PR LD    +HV  ++ G  H +V+
Sbjct: 324 RHGKLGLGEENFTNQFKPTLCPRFLD----YHVHSVTCGGCHMLVL 365



 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 52/198 (26%), Positives = 85/198 (42%), Gaps = 8/198 (4%)

Query: 272 VQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG 331
           ++I+ G  +   VT NG ++ FGS +   LG G +    +P  ++  R + + +   + G
Sbjct: 39  LRISCGDEHTALVTENGKLFMFGSNNWGQLGLGTKTTVNKPTCVKALRSERVKLT--ACG 96

Query: 332 DEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKT-FVL 390
             H +   S G +Y  G    G LG GD  D+T    +        +++ A    T   L
Sbjct: 97  RTHTLVFTSRGNLYACGGNNEGQLGLGDCNDRTSFHLVEFFNKQGPIKMLAAGSNTSAAL 156

Query: 391 VDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGR 450
              G +Y  G    G +G    G     L P+ +       V  +S G YH+  VT  G 
Sbjct: 157 TQDGRLYMRGDNSEGQIGL---GKESNALTPQEVSV--GKRVFWVSCGYYHSAFVTVDGA 211

Query: 451 LFGFGDNERAQLGHDTLR 468
           L+ FG+ +  +LG  T +
Sbjct: 212 LYTFGEKDSGKLGLSTEK 229



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 48/185 (25%), Positives = 78/185 (42%), Gaps = 8/185 (4%)

Query: 295 SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGA 354
           SG+ F  G  +  D     A   F  K    +R+S GDEH   +  +G ++ +G    G 
Sbjct: 12  SGAVFTFGKSKFAD----NAPSKFWLKNDVPLRISCGDEHTALVTENGKLFMFGSNNWGQ 67

Query: 355 LGHGDEIDKTLPEPLSSLKSH-LAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRG 413
           LG G +     P  + +L+S  + +  C R   T V    G++Y  G    G LG  D  
Sbjct: 68  LGLGTKTTVNKPTCVKALRSERVKLTACGRTH-TLVFTSRGNLYACGGNNEGQLGLGD-- 124

Query: 414 VSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEP 473
            +D+     +    +   +  ++ G   +  +T  GRL+  GDN   Q+G       L P
Sbjct: 125 CNDRTSFHLVEFFNKQGPIKMLAAGSNTSAALTQDGRLYMRGDNSEGQIGLGKESNALTP 184

Query: 474 TEIFI 478
            E+ +
Sbjct: 185 QEVSV 189


>gi|334183781|ref|NP_177129.2| regulator of chromosome condensation and FYVE zinc finger
           domain-containing protein [Arabidopsis thaliana]
 gi|332196844|gb|AEE34965.1| regulator of chromosome condensation and FYVE zinc finger
           domain-containing protein [Arabidopsis thaliana]
          Length = 1041

 Score =  117 bits (294), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 104/386 (26%), Positives = 166/386 (43%), Gaps = 28/386 (7%)

Query: 119 GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN----- 173
           G YH    +   VF  G S+   +  G   +   +      P A     V  ++N     
Sbjct: 250 GSYHEDFDALGDVFVWGESISDGVLSGTGNSLNSTTEDALLPKALESTIVLDAQNIACGK 309

Query: 174 -HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            HA  V + G++F+ G+                +P+ + +++G+  K +  G   T  +T
Sbjct: 310 CHAVLVTKQGEIFSWGEGKGGK-LGHGLETDAQKPKFISSVRGLGFKSLACGDFHTCAIT 368

Query: 233 IRGHVHTCGSNTHG--QLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 290
             G +++ G  TH    LGHG+      PK +    +   V  +A GP +   V  +G +
Sbjct: 369 QSGDLYSWGDGTHNVDLLGHGNESSCWIPKRVTGDLQGLYVSDVACGPWHTAVVASSGQL 428

Query: 291 YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL------------ 338
           ++FG G+   LGHG++     PR +++    G+ V +V+ G  H  A+            
Sbjct: 429 FTFGDGTFGALGHGDRRSTSVPREVESL--IGLIVTKVACGVWHTAAVVEVTNEASEAEV 486

Query: 339 DSS-GYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVY 397
           DSS G V+TWG G  G LGHGD   K LPE + SL +    QV      T      G VY
Sbjct: 487 DSSRGQVFTWGDGEKGQLGHGDNDTKLLPECVISLTNENICQVACGHSLTVSRTSRGHVY 546

Query: 398 GFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDN 457
             G   +G LG P    +      R+   +    V +I+ G YH  V+T +  ++ +G  
Sbjct: 547 TMGSTAYGQLGNP---TAKGNFPERVEGDIVEASVEEIACGSYHVAVLTSKSEIYTWGKG 603

Query: 458 ERAQLGHDTLRGCLEPTEI-FIQEME 482
              QLGH  +    EP  + F++E +
Sbjct: 604 LNGQLGHGNVENKREPAVVGFLREKQ 629



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 73/250 (29%), Positives = 111/250 (44%), Gaps = 31/250 (12%)

Query: 101 EHSSDIVETSAGNMQ------ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVS 153
           E S  I +   G++Q      +  G +HT ++++S  +F+ G    G LGHG   +  V 
Sbjct: 391 ESSCWIPKRVTGDLQGLYVSDVACGPWHTAVVASSGQLFTFGDGTFGALGHGDRRSTSVP 450

Query: 154 ----------FTRI--NFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTN 201
                      T++       A VV+V+   + A      GQVFT GD      GH D +
Sbjct: 451 REVESLIGLIVTKVACGVWHTAAVVEVTNEASEAEVDSSRGQVFTWGDGEKGQLGHGDND 510

Query: 202 RPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKS 261
             +  P  V +L      QV  G + T   T RGHV+T GS  +GQLG+      PT K 
Sbjct: 511 TKLL-PECVISLTNENICQVACGHSLTVSRTSRGHVYTMGSTAYGQLGN------PTAKG 563

Query: 262 IAPLEEVGSVVQ-----IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQ 316
             P    G +V+     IA G  ++  +T    +Y++G G N  LGHG   ++ +P  + 
Sbjct: 564 NFPERVEGDIVEASVEEIACGSYHVAVLTSKSEIYTWGKGLNGQLGHGNVENKREPAVVG 623

Query: 317 TFRRKGIHVV 326
             R K +  +
Sbjct: 624 FLREKQVKAI 633



 Score = 64.3 bits (155), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 112/443 (25%), Positives = 176/443 (39%), Gaps = 51/443 (11%)

Query: 26  RLSAVDLAHLELTSKTFGGSHGLYPQKFRSLVDLAASQLCALHSIYAGMSRNVQIELLNR 85
           R S  D   L L+S     SHG Y + F +L D+          + +G          N 
Sbjct: 229 RFSTNDPFRLSLSSAVSTSSHGSYHEDFDALGDVFVWGESISDGVLSGTG--------NS 280

Query: 86  CNGNWKRVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLISNS-SVFSCGSSLCGVLGH 144
            N   +  L  L     S+ +++       I  G+ H +L++    +FS G    G LGH
Sbjct: 281 LNSTTEDAL--LPKALESTIVLDA----QNIACGKCHAVLVTKQGEIFSWGEGKGGKLGH 334

Query: 145 GPET----TQCVSFTR-INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFC--CGH 197
           G ET     + +S  R + F S A        + H   + QSG +++ GD +      GH
Sbjct: 335 GLETDAQKPKFISSVRGLGFKSLA------CGDFHTCAITQSGDLYSWGDGTHNVDLLGH 388

Query: 198 RDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRP 257
            + +      R+   L+G+    V  G   T  +   G + T G  T G LGHGD     
Sbjct: 389 GNESSCWIPKRVTGDLQGLYVSDVACGPWHTAVVASSGQLFTFGDGTFGALGHGDRRSTS 448

Query: 258 TPKSIAPLEEVGSVV-QIAAGPSYMLAV-------------TGNGVVYSFGSGSNFCLGH 303
            P+ +  L  +G +V ++A G  +  AV             +  G V+++G G    LGH
Sbjct: 449 VPREVESL--IGLIVTKVACGVWHTAAVVEVTNEASEAEVDSSRGQVFTWGDGEKGQLGH 506

Query: 304 GEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK 363
           G+   +L P  + +   + I   +V+ G    V+  S G+VYT G    G LG+      
Sbjct: 507 GDNDTKLLPECVISLTNENI--CQVACGHSLTVSRTSRGHVYTMGSTAYGQLGN-PTAKG 563

Query: 364 TLPEPLSSLKSHLAV-QVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPR 422
             PE +       +V ++        VL     +Y +G    G LG    G  +    P 
Sbjct: 564 NFPERVEGDIVEASVEEIACGSYHVAVLTSKSEIYTWGKGLNGQLG---HGNVENKREPA 620

Query: 423 ILDSLRAHHVSQISTGLYHTVVV 445
           ++  LR   V  I+ G   T V+
Sbjct: 621 VVGFLREKQVKAITCGSNFTAVI 643


>gi|449447492|ref|XP_004141502.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein
           ligase HERC1-like [Cucumis sativus]
          Length = 390

 Score =  117 bits (294), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 101/366 (27%), Positives = 158/366 (43%), Gaps = 27/366 (7%)

Query: 125 LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQV 184
           + + +++ + GS   G LG G    +      I    + +V  V A   ++  + + G++
Sbjct: 1   MAAGTAIIAWGSGEDGQLGLG-NNEEREWVCAIKALESQNVCSVVAGSRNSLAITEDGKL 59

Query: 185 FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNT 244
           FT G N     GH    +    P  V+AL  V   Q   G      +  +G  +  G N 
Sbjct: 60  FTWGWNQRGTLGHPAGTKSENVPSQVKALSNVKIVQAAIGGWHCLAVDDQGRAYAWGGNE 119

Query: 245 HGQLGH----GDTLDRPTPKSIAPLEEVGS---VVQIAAGPSYMLAVTGNGVVYSFGSGS 297
           +GQ G      D   RP  + IA  +       V Q+AAG ++ + +T  G V+++G   
Sbjct: 120 YGQCGEEPEKKDNTGRPPRRDIAIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWTWGQ-- 177

Query: 298 NFCLGHGEQHDELQPRAIQTF----RRKGIHVVR-VSAGDEHVVALDSSGYVYTWGKGYC 352
                         P  I       R +G+ +VR ++ G  H +AL   G ++ WG    
Sbjct: 178 -----------PWPPGDITQISVPVRVQGLDMVRLIAVGAFHNLALQEDGTLWAWGNNEY 226

Query: 353 GALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDR 412
           G LG GD   ++ P P+  L     V + A    +  L D G VYG+G    G LGF D 
Sbjct: 227 GQLGTGDTQPRSQPIPVQGLSGLTLVDIAAGGWHSTALTDNGEVYGWGRGEHGRLGFGDN 286

Query: 413 GVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLE 472
             S K++ P+ +  L    + QIS G  H+V VT  GR+F FG  +  +LG+       +
Sbjct: 287 DKSSKMV-PQKVQLLSGEEIVQISCGGTHSVAVTSDGRMFSFGRGDHGRLGYGRKVTTGQ 345

Query: 473 PTEIFI 478
           P E+ I
Sbjct: 346 PEEVPI 351



 Score = 92.0 bits (227), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 93/356 (26%), Positives = 147/356 (41%), Gaps = 42/356 (11%)

Query: 70  IYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLISNS 129
           I  G   + Q+ L N     W   ++ L+S ++   +V  S  ++ IT          + 
Sbjct: 8   IAWGSGEDGQLGLGNNEEREWVCAIKALES-QNVCSVVAGSRNSLAIT---------EDG 57

Query: 130 SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGD 189
            +F+ G +  G LGH   T      +++   S   +VQ +    H   V   G+ +  G 
Sbjct: 58  KLFTWGWNQRGTLGHPAGTKSENVPSQVKALSNVKIVQAAIGGWHCLAVDDQGRAYAWGG 117

Query: 190 NSSFCCGHR-----DTNRPIFR---------PRLVEALKGVPCKQVTAGLNFTGFLTIRG 235
           N    CG       +T RP  R         P+L+        +QV AG   +  LT  G
Sbjct: 118 NEYGQCGEEPEKKDNTGRPPRRDIAIPQRCAPKLI-------VRQVAAGGTHSVVLTREG 170

Query: 236 HVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 295
           HV T G         GD      P  +  L+    V  IA G  + LA+  +G ++++G+
Sbjct: 171 HVWTWGQ----PWPPGDITQISVPVRVQGLD---MVRLIAVGAFHNLALQEDGTLWAWGN 223

Query: 296 GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGAL 355
                LG G+     QP  +Q     G+ +V ++AG  H  AL  +G VY WG+G  G L
Sbjct: 224 NEYGQLGTGDTQPRSQPIPVQGL--SGLTLVDIAAGGWHSTALTDNGEVYGWGRGEHGRL 281

Query: 356 GHG--DEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGF 409
           G G  D+  K +P+ +  L     VQ+      +  +   G ++ FG    G LG+
Sbjct: 282 GFGDNDKSSKMVPQKVQLLSGEEIVQISCGGTHSVAVTSDGRMFSFGRGDHGRLGY 337


>gi|145594515|ref|YP_001158812.1| regulator of chromosome condensation, RCC1 [Salinispora tropica
           CNB-440]
 gi|145303852|gb|ABP54434.1| regulator of chromosome condensation, RCC1 [Salinispora tropica
           CNB-440]
          Length = 554

 Score =  117 bits (294), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 94/338 (27%), Positives = 147/338 (43%), Gaps = 11/338 (3%)

Query: 130 SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGD 189
           +V + G +  G LG G  T +    T +  P+   +  ++A  +H+  +  +G V   G 
Sbjct: 58  TVLAWGDNFSGQLGDGTTTARSTPVT-VGLPAGTTITALAAGGSHSLALTDTGVVLAWGS 116

Query: 190 NSSFCCGH-RDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQL 248
           NS    G    T+R    P  V    G     + AG   +  LT  G V   GSN++GQL
Sbjct: 117 NSRGQLGDGTTTDR--STPVTVGLPAGTTITALAAGRRHSLALTDTGAVLAWGSNSNGQL 174

Query: 249 GHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHD 308
           G G T  R TP ++      G+ +   A  +Y LA+T  G   ++GS S   LG G   D
Sbjct: 175 GDGTTTARSTPVTVG--LPAGTTITALAASTYSLALTDTGAALAWGSNSRGQLGDGTTTD 232

Query: 309 ELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEP 368
              P  +      G  +  ++A  +H +AL  +G V  WG    G LG G   +++ P  
Sbjct: 233 RSTPVTVS--LPAGTTITALAASYDHSLALTDTGAVLAWGSNSNGQLGDGTTTNRSTPVT 290

Query: 369 LSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLR 428
           +          + A +  T VL   G+V  +G    G LG  D   +D+   P  +    
Sbjct: 291 VGLPAGTTITALAAGRSHTLVLTSAGAVLAWGSNSNGQLG--DGTTTDRS-TPVTVGLPA 347

Query: 429 AHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDT 466
              ++ ++ G YH++ +TD G +  +G N   QLG  T
Sbjct: 348 GTTITALAAGYYHSLALTDTGAVLAWGGNSYGQLGDGT 385



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 84/294 (28%), Positives = 130/294 (44%), Gaps = 13/294 (4%)

Query: 119 GRYHTLLISNSSV-FSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAF 177
           G  H+L ++++ V  + GS+  G LG G  T +    T +  P+   +  ++A   H+  
Sbjct: 98  GGSHSLALTDTGVVLAWGSNSRGQLGDGTTTDRSTPVT-VGLPAGTTITALAAGRRHSLA 156

Query: 178 VLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF---LTIR 234
           +  +G V   G NS+   G   T       R      G+P       L  + +   LT  
Sbjct: 157 LTDTGAVLAWGSNSNGQLGDGTTTA-----RSTPVTVGLPAGTTITALAASTYSLALTDT 211

Query: 235 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 294
           G     GSN+ GQLG G T DR TP +++ L    ++  +AA   + LA+T  G V ++G
Sbjct: 212 GAALAWGSNSRGQLGDGTTTDRSTPVTVS-LPAGTTITALAASYDHSLALTDTGAVLAWG 270

Query: 295 SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGA 354
           S SN  LG G   +   P  +      G  +  ++AG  H + L S+G V  WG    G 
Sbjct: 271 SNSNGQLGDGTTTNRSTP--VTVGLPAGTTITALAAGRSHTLVLTSAGAVLAWGSNSNGQ 328

Query: 355 LGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLG 408
           LG G   D++ P  +          + A    +  L DTG+V  +G   +G LG
Sbjct: 329 LGDGTTTDRSTPVTVGLPAGTTITALAAGYYHSLALTDTGAVLAWGGNSYGQLG 382



 Score = 99.4 bits (246), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 88/305 (28%), Positives = 127/305 (41%), Gaps = 8/305 (2%)

Query: 184 VFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 243
           V   GDN S   G   T      P  V    G     + AG + +  LT  G V   GSN
Sbjct: 59  VLAWGDNFSGQLGDGTTTA-RSTPVTVGLPAGTTITALAAGGSHSLALTDTGVVLAWGSN 117

Query: 244 THGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH 303
           + GQLG G T DR TP ++  L    ++  +AAG  + LA+T  G V ++GS SN  LG 
Sbjct: 118 SRGQLGDGTTTDRSTPVTVG-LPAGTTITALAAGRRHSLALTDTGAVLAWGSNSNGQLGD 176

Query: 304 GEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK 363
           G       P  +      G  +  ++A   + +AL  +G    WG    G LG G   D+
Sbjct: 177 GTTTARSTP--VTVGLPAGTTITALAA-STYSLALTDTGAALAWGSNSRGQLGDGTTTDR 233

Query: 364 TLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRI 423
           + P  +S         + A    +  L DTG+V  +G    G LG    G +     P  
Sbjct: 234 STPVTVSLPAGTTITALAASYDHSLALTDTGAVLAWGSNSNGQLG---DGTTTNRSTPVT 290

Query: 424 LDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQEMEE 483
           +       ++ ++ G  HT+V+T  G +  +G N   QLG  T      P  + +     
Sbjct: 291 VGLPAGTTITALAAGRSHTLVLTSAGAVLAWGSNSNGQLGDGTTTDRSTPVTVGLPAGTT 350

Query: 484 DTGLA 488
            T LA
Sbjct: 351 ITALA 355



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 78/250 (31%), Positives = 117/250 (46%), Gaps = 9/250 (3%)

Query: 119 GRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAF 177
           GR H+L ++++ +V + GS+  G LG G  T +    T +  P+   +  ++AS    A 
Sbjct: 150 GRRHSLALTDTGAVLAWGSNSNGQLGDGTTTARSTPVT-VGLPAGTTITALAASTYSLAL 208

Query: 178 VLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
              +G     G NS    G    T+R    P  V    G     + A  + +  LT  G 
Sbjct: 209 T-DTGAALAWGSNSRGQLGDGTTTDR--STPVTVSLPAGTTITALAASYDHSLALTDTGA 265

Query: 237 VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 296
           V   GSN++GQLG G T +R TP ++  L    ++  +AAG S+ L +T  G V ++GS 
Sbjct: 266 VLAWGSNSNGQLGDGTTTNRSTPVTVG-LPAGTTITALAAGRSHTLVLTSAGAVLAWGSN 324

Query: 297 SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 356
           SN  LG G   D   P  +      G  +  ++AG  H +AL  +G V  WG    G LG
Sbjct: 325 SNGQLGDGTTTDRSTP--VTVGLPAGTTITALAAGYYHSLALTDTGAVLAWGGNSYGQLG 382

Query: 357 HGDEIDKTLP 366
            G   D++ P
Sbjct: 383 DGTTTDRSTP 392



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 43/143 (30%), Positives = 68/143 (47%), Gaps = 5/143 (3%)

Query: 122 HTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
           H+L ++++ +V + GS+  G LG G  T +    T +  P+   +  ++A  +H   +  
Sbjct: 256 HSLALTDTGAVLAWGSNSNGQLGDGTTTNRSTPVT-VGLPAGTTITALAAGRSHTLVLTS 314

Query: 181 SGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 239
           +G V   G NS+   G    T+R    P  V    G     + AG   +  LT  G V  
Sbjct: 315 AGAVLAWGSNSNGQLGDGTTTDR--STPVTVGLPAGTTITALAAGYYHSLALTDTGAVLA 372

Query: 240 CGSNTHGQLGHGDTLDRPTPKSI 262
            G N++GQLG G T DR TP ++
Sbjct: 373 WGGNSYGQLGDGTTTDRSTPVTV 395


>gi|387540886|gb|AFJ71070.1| putative E3 ubiquitin-protein ligase HERC6 isoform 1 [Macaca
           mulatta]
          Length = 1020

 Score =  117 bits (294), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 89/274 (32%), Positives = 131/274 (47%), Gaps = 8/274 (2%)

Query: 193 FCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGD 252
           FC G   T+    + R  E   G    Q  +G   +  L     V +CG N+ GQLG   
Sbjct: 3   FCWG---TDSRELQRRRTERSPGAELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRR 59

Query: 253 TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGE-QHDELQ 311
                 P+ I  LE + +V  ++ G  + LAV   G V+++G+GS   LG GE +     
Sbjct: 60  APRGELPEPIQALETL-NVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFT 118

Query: 312 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEI-DKTLPEPLS 370
           P+ I T    GI +++VS G  H +AL     V++WGK   G LG G E+  +  P+ + 
Sbjct: 119 PKKITTL--NGIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEVPSQASPQRVR 176

Query: 371 SLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAH 430
           SL+     QV A    +F L   G+ +G+G    G L    R V  +  +P  + +L+  
Sbjct: 177 SLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSIGALKNL 236

Query: 431 HVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 464
            V  IS G  HT V+   G++F FGDN   QLG+
Sbjct: 237 GVIYISCGDEHTAVLIQDGKVFTFGDNSSGQLGY 270



 Score =  103 bits (256), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 88/302 (29%), Positives = 148/302 (49%), Gaps = 20/302 (6%)

Query: 163 AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 222
           A ++Q ++ E H+  +L + +V +CGDNS    G R   R    P  ++AL+ +    V+
Sbjct: 23  AELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRRAPRGEL-PEPIQALETLNVDLVS 81

Query: 223 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRP-TPKSIAPLEEVGSVVQIAAGPSYM 281
            G   +  +  +G V   G+ + GQLG G+  +   TPK I  L  +  ++Q++ G  + 
Sbjct: 82  CGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKITTLNGI-KIIQVSCGHYHS 140

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQ-HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 340
           LA++ +  V+S+G  S+  LG G++   +  P+ +++   +GI + +V+AG  H  AL  
Sbjct: 141 LALSKDSQVFSWGKNSHGQLGLGKEVPSQASPQRVRSL--EGIPLAQVAAGGAHSFALSL 198

Query: 341 SGYVYTWGKGYCGAL---GHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVY 397
            G  + WG    G L   G    +    P  + +LK+   + +      T VL+  G V+
Sbjct: 199 CGTSFGWGSNSAGQLALSGRNVPVQSNKPLSIGALKNLGVIYISCGDEHTAVLIQDGKVF 258

Query: 398 GFGWMGFGSLGF---PDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV-VTDRGRLFG 453
            FG    G LG+   P++     V R   +D L    VSQI  G YHT+  V   G++  
Sbjct: 259 TFGDNSSGQLGYSPTPEKRGPQLVER---IDGL----VSQIDCGSYHTLAYVHTTGQVIS 311

Query: 454 FG 455
           FG
Sbjct: 312 FG 313



 Score = 92.8 bits (229), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 82/299 (27%), Positives = 134/299 (44%), Gaps = 23/299 (7%)

Query: 114 MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHV 165
           +Q  +G  H+LL+ +N  V SCG +  G LG         PE  Q +    ++       
Sbjct: 26  LQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRRAPRGELPEPIQALETLNVDL------ 79

Query: 166 VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 225
             VS  + H+  V   G+VF  G  S    G  +     F P+ +  L G+   QV+ G 
Sbjct: 80  --VSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKITTLNGIKIIQVSCGH 137

Query: 226 NFTGFLTIRGHVHTCGSNTHGQLGHGDTL-DRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 284
             +  L+    V + G N+HGQLG G  +  + +P+ +  LE +  + Q+AAG ++  A+
Sbjct: 138 YHSLALSKDSQVFSWGKNSHGQLGLGKEVPSQASPQRVRSLEGI-PLAQVAAGGAHSFAL 196

Query: 285 TGNGVVYSFGSGSNFCLGHGEQHDELQ---PRAIQTFRRKGIHVVRVSAGDEHVVALDSS 341
           +  G  + +GS S   L    ++  +Q   P +I   +  G  V+ +S GDEH   L   
Sbjct: 197 SLCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSIGALKNLG--VIYISCGDEHTAVLIQD 254

Query: 342 GYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 400
           G V+T+G    G LG+    +K  P+ +  +   ++   C        +  TG V  FG
Sbjct: 255 GKVFTFGDNSSGQLGYSPTPEKRGPQLVERIDGLVSQIDCGSYHTLAYVHTTGQVISFG 313


>gi|384939244|gb|AFI33227.1| putative E3 ubiquitin-protein ligase HERC6 isoform 1 [Macaca
           mulatta]
          Length = 1020

 Score =  117 bits (294), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 89/274 (32%), Positives = 131/274 (47%), Gaps = 8/274 (2%)

Query: 193 FCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGD 252
           FC G   T+    + R  E   G    Q  +G   +  L     V +CG N+ GQLG   
Sbjct: 3   FCWG---TDSRELQRRRTERSPGAELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRR 59

Query: 253 TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGE-QHDELQ 311
                 P+ I  LE + +V  ++ G  + LAV   G V+++G+GS   LG GE +     
Sbjct: 60  APRGELPEPIQALETL-NVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFT 118

Query: 312 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEI-DKTLPEPLS 370
           P+ I T    GI +++VS G  H +AL     V++WGK   G LG G E+  +  P+ + 
Sbjct: 119 PKKITTL--NGIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEVPSQASPQRVR 176

Query: 371 SLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAH 430
           SL+     QV A    +F L   G+ +G+G    G L    R V  +  +P  + +L+  
Sbjct: 177 SLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSIGALKNL 236

Query: 431 HVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 464
            V  IS G  HT V+   G++F FGDN   QLG+
Sbjct: 237 GVIYISCGDEHTAVLIQDGKVFTFGDNSSGQLGY 270



 Score =  103 bits (256), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 88/302 (29%), Positives = 148/302 (49%), Gaps = 20/302 (6%)

Query: 163 AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 222
           A ++Q ++ E H+  +L + +V +CGDNS    G R   R    P  ++AL+ +    V+
Sbjct: 23  AELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRRAPRGEL-PEPIQALETLNVDLVS 81

Query: 223 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRP-TPKSIAPLEEVGSVVQIAAGPSYM 281
            G   +  +  +G V   G+ + GQLG G+  +   TPK I  L  +  ++Q++ G  + 
Sbjct: 82  CGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKITTLNGI-KIIQVSCGHYHS 140

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQ-HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 340
           LA++ +  V+S+G  S+  LG G++   +  P+ +++   +GI + +V+AG  H  AL  
Sbjct: 141 LALSKDSQVFSWGKNSHGQLGLGKEVPSQASPQRVRSL--EGIPLAQVAAGGAHSFALSL 198

Query: 341 SGYVYTWGKGYCGAL---GHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVY 397
            G  + WG    G L   G    +    P  + +LK+   + +      T VL+  G V+
Sbjct: 199 CGTSFGWGSNSAGQLALSGRNVPVQSNKPLSIGALKNLGVIYISCGDEHTAVLIQDGKVF 258

Query: 398 GFGWMGFGSLGF---PDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV-VTDRGRLFG 453
            FG    G LG+   P++     V R   +D L    VSQI  G YHT+  V   G++  
Sbjct: 259 TFGDNSSGQLGYSPTPEKRGPQLVER---IDGL----VSQIDCGSYHTLAYVHTTGQVIS 311

Query: 454 FG 455
           FG
Sbjct: 312 FG 313



 Score = 92.8 bits (229), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 82/299 (27%), Positives = 134/299 (44%), Gaps = 23/299 (7%)

Query: 114 MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHV 165
           +Q  +G  H+LL+ +N  V SCG +  G LG         PE  Q +    ++       
Sbjct: 26  LQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRRAPRGELPEPIQALETLNVDL------ 79

Query: 166 VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 225
             VS  + H+  V   G+VF  G  S    G  +     F P+ +  L G+   QV+ G 
Sbjct: 80  --VSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKITTLNGIKIIQVSCGH 137

Query: 226 NFTGFLTIRGHVHTCGSNTHGQLGHGDTL-DRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 284
             +  L+    V + G N+HGQLG G  +  + +P+ +  LE +  + Q+AAG ++  A+
Sbjct: 138 YHSLALSKDSQVFSWGKNSHGQLGLGKEVPSQASPQRVRSLEGI-PLAQVAAGGAHSFAL 196

Query: 285 TGNGVVYSFGSGSNFCLGHGEQHDELQ---PRAIQTFRRKGIHVVRVSAGDEHVVALDSS 341
           +  G  + +GS S   L    ++  +Q   P +I   +  G  V+ +S GDEH   L   
Sbjct: 197 SLCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSIGALKNLG--VIYISCGDEHTAVLIQD 254

Query: 342 GYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 400
           G V+T+G    G LG+    +K  P+ +  +   ++   C        +  TG V  FG
Sbjct: 255 GKVFTFGDNSSGQLGYSPTPEKRGPQLVERIDGLVSQIDCGSYHTLAYVHTTGQVISFG 313


>gi|326670703|ref|XP_003199276.1| PREDICTED: hypothetical protein LOC571327 [Danio rerio]
          Length = 1698

 Score =  117 bits (294), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 90/304 (29%), Positives = 144/304 (47%), Gaps = 18/304 (5%)

Query: 166 VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 225
           V +S  ++H+AFV + G++F  GDN+    G +    P+ +P  V+ LKG   + V  G 
Sbjct: 37  VHISCGQSHSAFVTEQGRLFVFGDNNRGQLGLQ-IKGPVTKPVCVKVLKGERAQSVACGT 95

Query: 226 NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 285
           + T   T +G +   G N+ GQLG G   D  + + + P  +   +  ++AG     A+T
Sbjct: 96  DHTLVSTSQGEILAAGGNSDGQLGLGHCNDSISFQRLRPFCDYAPIKLLSAGDHTSAALT 155

Query: 286 GNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVY 345
            +G ++ +G  S   LG G     L P+ +      G  +  VS G  H   +  SG VY
Sbjct: 156 EDGRLFLWGDNSAGQLGFGNDSHALLPKELNM----GQSIHWVSCGYRHSALVTDSGDVY 211

Query: 346 TWGKGYCGALGHGDE--IDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYG---FG 400
           ++G+   G LG       + + P+ + SL S L V  C  K    +  D    +G   FG
Sbjct: 212 SFGESADGRLGLSAHQLANHSYPQRVESLHSVLQV-ACGGKHTLALTEDELYCFGGGEFG 270

Query: 401 WMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERA 460
            +G G+L F    V+D    P  +   R   V+ ++ G  H+ ++TD G L+ FGD    
Sbjct: 271 QLGLGTLVF----VADS---PVAVGHFRKGRVTHVTCGEQHSALITDSGLLYTFGDGRHG 323

Query: 461 QLGH 464
           +LGH
Sbjct: 324 KLGH 327



 Score = 82.8 bits (203), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 75/250 (30%), Positives = 121/250 (48%), Gaps = 15/250 (6%)

Query: 116 ITTGRYHTLL-ISNSSVFSCGSSLCGVLGHGPETTQCVSFTRIN-FPSAAHVVQVSASEN 173
           +  G  HTL+  S   + + G +  G LG G      +SF R+  F   A +  +SA ++
Sbjct: 91  VACGTDHTLVSTSQGEILAAGGNSDGQLGLG-HCNDSISFQRLRPFCDYAPIKLLSAGDH 149

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
            +A + + G++F  GDNS+   G  + +  +  P+  E   G     V+ G   +  +T 
Sbjct: 150 TSAALTEDGRLFLWGDNSAGQLGFGNDSHALL-PK--ELNMGQSIHWVSCGYRHSALVTD 206

Query: 234 RGHVHTCGSNTHGQLGHG--DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
            G V++ G +  G+LG       +   P+ +   E + SV+Q+A G  + LA+T + + Y
Sbjct: 207 SGDVYSFGESADGRLGLSAHQLANHSYPQRV---ESLHSVLQVACGGKHTLALTEDEL-Y 262

Query: 292 SFGSGSNFCLGHGEQ-HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKG 350
            FG G    LG G        P A+  FR+    V  V+ G++H   +  SG +YT+G G
Sbjct: 263 CFGGGEFGQLGLGTLVFVADSPVAVGHFRKG--RVTHVTCGEQHSALITDSGLLYTFGDG 320

Query: 351 YCGALGHGDE 360
             G LGHGDE
Sbjct: 321 RHGKLGHGDE 330



 Score = 57.8 bits (138), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 59/220 (26%), Positives = 99/220 (45%), Gaps = 17/220 (7%)

Query: 125 LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQV 184
           L  +  +F  G +  G LG G ++   +    +N   + H   VS    H+A V  SG V
Sbjct: 154 LTEDGRLFLWGDNSAGQLGFGNDSHALLP-KELNMGQSIH--WVSCGYRHSALVTDSGDV 210

Query: 185 FTCGDNSSFCCG---HRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCG 241
           ++ G+++    G   H+  N     P+ VE+L  V   QV  G   T  LT    ++  G
Sbjct: 211 YSFGESADGRLGLSAHQLANHSY--PQRVESLHSV--LQVACGGKHTLALT-EDELYCFG 265

Query: 242 SNTHGQLGHGD-TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 300
               GQLG G       +P ++    + G V  +  G  +   +T +G++Y+FG G +  
Sbjct: 266 GGEFGQLGLGTLVFVADSPVAVGHFRK-GRVTHVTCGEQHSALITDSGLLYTFGDGRHGK 324

Query: 301 LGHGEQH--DELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
           LGHG+++  ++  P   Q F      V+ V+ G  H++  
Sbjct: 325 LGHGDENFTNQFTPTVCQRFFEYS--VMTVACGSSHMLVF 362



 Score = 45.8 bits (107), Expect = 0.044,   Method: Composition-based stats.
 Identities = 40/151 (26%), Positives = 59/151 (39%), Gaps = 2/151 (1%)

Query: 326 VRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKR 385
           V +S G  H   +   G ++ +G    G LG   +   T P  +  LK   A  V     
Sbjct: 37  VHISCGQSHSAFVTEQGRLFVFGDNNRGQLGLQIKGPVTKPVCVKVLKGERAQSVACGTD 96

Query: 386 KTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVV 445
            T V    G +   G    G LG      +D +   R+        +  +S G + +  +
Sbjct: 97  HTLVSTSQGEILAAGGNSDGQLGLGH--CNDSISFQRLRPFCDYAPIKLLSAGDHTSAAL 154

Query: 446 TDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 476
           T+ GRLF +GDN   QLG       L P E+
Sbjct: 155 TEDGRLFLWGDNSAGQLGFGNDSHALLPKEL 185


>gi|296196030|ref|XP_002745681.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 [Callithrix
           jacchus]
          Length = 1006

 Score =  117 bits (294), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 83/260 (31%), Positives = 126/260 (48%), Gaps = 5/260 (1%)

Query: 208 RLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEE 267
           R  E   G    Q  +G      L     VH+CG N+ GQLG         P+ +  L+ 
Sbjct: 15  RRTEGSPGAELLQAASGERHALLLLTNSSVHSCGENSRGQLGRRGAPRGDLPEPVQALKT 74

Query: 268 VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGE-QHDELQPRAIQTFRRKGIHVV 326
           +   + ++ G  + LAV   G V+++G+GS   LG GE +     P+ I T    GI ++
Sbjct: 75  LKFNL-VSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEINFTPKKITTL--TGIKII 131

Query: 327 RVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEID-KTLPEPLSSLKSHLAVQVCARKR 385
           +VS G  H +AL     V++WGK   G LG G E+  +  P+ + SL+     QV A   
Sbjct: 132 QVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKELSSQASPQRVRSLEGIPVAQVAAGGA 191

Query: 386 KTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVV 445
            +F L   G+ +G+G    G L    R V  +  +P  + +L+   V  IS G  HT V+
Sbjct: 192 HSFALSLCGTSFGWGSNSAGQLALSGRNVQVQSNKPLSIGALKNLGVIYISCGDEHTAVL 251

Query: 446 TDRGRLFGFGDNERAQLGHD 465
           +  G++F FGDN   QLG++
Sbjct: 252 SQDGKVFTFGDNSSGQLGYN 271



 Score =  101 bits (252), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 88/299 (29%), Positives = 133/299 (44%), Gaps = 23/299 (7%)

Query: 114 MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHV 165
           +Q  +G  H LL+ +NSSV SCG +  G LG         PE  Q +   + N       
Sbjct: 26  LQAASGERHALLLLTNSSVHSCGENSRGQLGRRGAPRGDLPEPVQALKTLKFNL------ 79

Query: 166 VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 225
             VS  + H+  V   G+VF  G  S    G  +     F P+ +  L G+   QV+ G 
Sbjct: 80  --VSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEINFTPKKITTLTGIKIIQVSCGH 137

Query: 226 NFTGFLTIRGHVHTCGSNTHGQLGHGDTL-DRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 284
             +  L+    V + G N+HGQLG G  L  + +P+ +  LE +  V Q+AAG ++  A+
Sbjct: 138 YHSLALSKDSQVFSWGKNSHGQLGLGKELSSQASPQRVRSLEGI-PVAQVAAGGAHSFAL 196

Query: 285 TGNGVVYSFGSGSNFCL---GHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 341
           +  G  + +GS S   L   G   Q    +P +I   +  G  V+ +S GDEH   L   
Sbjct: 197 SLCGTSFGWGSNSAGQLALSGRNVQVQSNKPLSIGALKNLG--VIYISCGDEHTAVLSQD 254

Query: 342 GYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 400
           G V+T+G    G LG+     K  P+ +  +   ++   C        +  TG V  FG
Sbjct: 255 GKVFTFGDNSSGQLGYNPTPKKRGPQIVERIDGLVSQIDCGGDHTIAYVHTTGQVVSFG 313



 Score =  101 bits (252), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 88/299 (29%), Positives = 146/299 (48%), Gaps = 14/299 (4%)

Query: 163 AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 222
           A ++Q ++ E HA  +L +  V +CG+NS    G R   R    P  V+ALK +    V+
Sbjct: 23  AELLQAASGERHALLLLTNSSVHSCGENSRGQLGRRGAPRGDL-PEPVQALKTLKFNLVS 81

Query: 223 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLD-RPTPKSIAPLEEVGSVVQIAAGPSYM 281
            G   +  +  +G V   G+ + GQLG G+  +   TPK I  L  +  ++Q++ G  + 
Sbjct: 82  CGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEINFTPKKITTLTGI-KIIQVSCGHYHS 140

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQ-HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 340
           LA++ +  V+S+G  S+  LG G++   +  P+ +++   +GI V +V+AG  H  AL  
Sbjct: 141 LALSKDSQVFSWGKNSHGQLGLGKELSSQASPQRVRSL--EGIPVAQVAAGGAHSFALSL 198

Query: 341 SGYVYTWGKGYCGAL---GHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVY 397
            G  + WG    G L   G   ++    P  + +LK+   + +      T VL   G V+
Sbjct: 199 CGTSFGWGSNSAGQLALSGRNVQVQSNKPLSIGALKNLGVIYISCGDEHTAVLSQDGKVF 258

Query: 398 GFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV-VTDRGRLFGFG 455
            FG    G LG+     + K   P+I++ +    VSQI  G  HT+  V   G++  FG
Sbjct: 259 TFGDNSSGQLGY---NPTPKKRGPQIVERIDG-LVSQIDCGGDHTIAYVHTTGQVVSFG 313


>gi|218189796|gb|EEC72223.1| hypothetical protein OsI_05329 [Oryza sativa Indica Group]
 gi|222619928|gb|EEE56060.1| hypothetical protein OsJ_04872 [Oryza sativa Japonica Group]
          Length = 910

 Score =  117 bits (294), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 94/314 (29%), Positives = 148/314 (47%), Gaps = 20/314 (6%)

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
           H+A V ++G+VFT G+ S    GH      I  PRL+E+L       V  G   T  +T 
Sbjct: 88  HSALVTKNGEVFTWGEESGGRLGHGSREDSIH-PRLIESLAVCNVDIVACGEFHTCAVTT 146

Query: 234 RGHVHTCGSNTH--GQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
            G ++T G  TH  G LGHG  +    PK IA   E  +V  ++ G  +   +T  G ++
Sbjct: 147 AGELYTWGDGTHNVGLLGHGKDVSHWIPKRIAGALEGLAVAYVSCGTWHTALITTMGQLF 206

Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL-----------DS 340
           +FG G+   LGHG +     P+ +++    G+  + V+ G  H  A+            S
Sbjct: 207 TFGDGTFGVLGHGNRESISCPKEVESL--SGLKTISVACGVWHTAAIVEVIVTQSSSSIS 264

Query: 341 SGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 400
           SG ++TWG G    LGHGD+  +  P  ++SL  +   ++      T  L  +G V   G
Sbjct: 265 SGKLFTWGDGDKHRLGHGDKEPRLKPTCVASLIDYDFHRIACGHSLTVGLTTSGKVLSMG 324

Query: 401 WMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERA 460
              +G LG P    SD  + P +++ +   +V Q++ G YH  V+T +  +F +G     
Sbjct: 325 NTVYGQLGNPR---SDGKI-PCLVEEIVGENVVQVACGSYHVAVLTIKSEVFTWGKGANG 380

Query: 461 QLGHDTLRGCLEPT 474
           +LGH  +     PT
Sbjct: 381 RLGHGDIEDRKIPT 394



 Score = 93.2 bits (230), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 70/243 (28%), Positives = 118/243 (48%), Gaps = 25/243 (10%)

Query: 252 DTLDRPTPKS----IAPLEE--VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGE 305
           DT+ R T ++      PLE   V     +  G  +   VT NG V+++G  S   LGHG 
Sbjct: 54  DTVVRSTVRTDVLRPKPLESNLVLDAYHVDCGVKHSALVTKNGEVFTWGEESGGRLGHGS 113

Query: 306 QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY--CGALGHGDEIDK 363
           + D + PR I++     + +  V+ G+ H  A+ ++G +YTWG G    G LGHG ++  
Sbjct: 114 REDSIHPRLIESLAVCNVDI--VACGEFHTCAVTTAGELYTWGDGTHNVGLLGHGKDVSH 171

Query: 364 TLPEPLSSLKSHLAVQ-VCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPR 422
            +P+ ++     LAV  V      T ++   G ++ FG   FG LG  +R   + +  P+
Sbjct: 172 WIPKRIAGALEGLAVAYVSCGTWHTALITTMGQLFTFGDGTFGVLGHGNR---ESISCPK 228

Query: 423 ILDSLRAHHVSQISTGLYHTVVVTD-----------RGRLFGFGDNERAQLGHDTLRGCL 471
            ++SL       ++ G++HT  + +            G+LF +GD ++ +LGH      L
Sbjct: 229 EVESLSGLKTISVACGVWHTAAIVEVIVTQSSSSISSGKLFTWGDGDKHRLGHGDKEPRL 288

Query: 472 EPT 474
           +PT
Sbjct: 289 KPT 291



 Score = 89.4 bits (220), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 78/272 (28%), Positives = 121/272 (44%), Gaps = 19/272 (6%)

Query: 116 ITTGRYHTLLISNSS---VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +  G +HT  ++ +     +  G+   G+LGHG + +  +            V  VS   
Sbjct: 134 VACGEFHTCAVTTAGELYTWGDGTHNVGLLGHGKDVSHWIPKRIAGALEGLAVAYVSCGT 193

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            H A +   GQ+FT GD +    GH +    I  P+ VE+L G+    V  G+  T  + 
Sbjct: 194 WHTALITTMGQLFTFGDGTFGVLGHGN-RESISCPKEVESLSGLKTISVACGVWHTAAIV 252

Query: 233 -----------IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 281
                        G + T G     +LGHGD   R  P  +A L +     +IA G S  
Sbjct: 253 EVIVTQSSSSISSGKLFTWGDGDKHRLGHGDKEPRLKPTCVASLIDY-DFHRIACGHSLT 311

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 341
           + +T +G V S G+     LG+     ++ P  ++     G +VV+V+ G  HV  L   
Sbjct: 312 VGLTTSGKVLSMGNTVYGQLGNPRSDGKI-PCLVEEI--VGENVVQVACGSYHVAVLTIK 368

Query: 342 GYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
             V+TWGKG  G LGHGD  D+ +P  + +L+
Sbjct: 369 SEVFTWGKGANGRLGHGDIEDRKIPTLVEALR 400



 Score = 74.7 bits (182), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 64/223 (28%), Positives = 104/223 (46%), Gaps = 22/223 (9%)

Query: 116 ITTGRYHTLLISN-SSVFSCGSSLCGVLGHGP-ETTQCVSFTRINFPSAAHVVQVSASEN 173
           ++ G +HT LI+    +F+ G    GVLGHG  E+  C     +   S    + V+    
Sbjct: 189 VSCGTWHTALITTMGQLFTFGDGTFGVLGHGNRESISCPK--EVESLSGLKTISVACGVW 246

Query: 174 HAAFVLQ-----------SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 222
           H A +++           SG++FT GD      GH D   P  +P  V +L      ++ 
Sbjct: 247 HTAAIVEVIVTQSSSSISSGKLFTWGDGDKHRLGHGD-KEPRLKPTCVASLIDYDFHRIA 305

Query: 223 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEV--GSVVQIAAGPSY 280
            G + T  LT  G V + G+  +GQLG+     R   K    +EE+   +VVQ+A G  +
Sbjct: 306 CGHSLTVGLTTSGKVLSMGNTVYGQLGN----PRSDGKIPCLVEEIVGENVVQVACGSYH 361

Query: 281 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGI 323
           +  +T    V+++G G+N  LGHG+  D   P  ++  R + +
Sbjct: 362 VAVLTIKSEVFTWGKGANGRLGHGDIEDRKIPTLVEALRDRSV 404



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 54/187 (28%), Positives = 84/187 (44%), Gaps = 6/187 (3%)

Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 351
           S  +GS+  +    + D L+P+ +++     +    V  G +H   +  +G V+TWG+  
Sbjct: 48  SVRTGSDTVVRSTVRTDVLRPKPLES--NLVLDAYHVDCGVKHSALVTKNGEVFTWGEES 105

Query: 352 CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVY--GFGWMGFGSLGF 409
            G LGHG   D   P  + SL       V   +  T  +   G +Y  G G    G LG 
Sbjct: 106 GGRLGHGSREDSIHPRLIESLAVCNVDIVACGEFHTCAVTTAGELYTWGDGTHNVGLLGH 165

Query: 410 PDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG 469
             + VS  + + RI  +L    V+ +S G +HT ++T  G+LF FGD     LGH     
Sbjct: 166 -GKDVSHWIPK-RIAGALEGLAVAYVSCGTWHTALITTMGQLFTFGDGTFGVLGHGNRES 223

Query: 470 CLEPTEI 476
              P E+
Sbjct: 224 ISCPKEV 230


>gi|449481449|ref|XP_004156186.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein
           ligase HERC1-like [Cucumis sativus]
          Length = 390

 Score =  117 bits (294), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 101/366 (27%), Positives = 158/366 (43%), Gaps = 27/366 (7%)

Query: 125 LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQV 184
           + + +++ + GS   G LG G    +      I    + +V  V A   ++  + + G++
Sbjct: 1   MAAGTAIIAWGSGEDGQLGLG-NNEEREWVCAIKALESQNVCSVVAGSRNSLAITEDGKL 59

Query: 185 FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNT 244
           FT G N     GH    +    P  V+AL  V   Q   G      +  +G  +  G N 
Sbjct: 60  FTWGWNQRGTLGHPAGTKSENVPSQVKALSNVKIVQAAIGGWHCLAVDDQGRAYAWGGNE 119

Query: 245 HGQLGH----GDTLDRPTPKSIAPLEEVGS---VVQIAAGPSYMLAVTGNGVVYSFGSGS 297
           +GQ G      D   RP  + IA  +       V Q+AAG ++ + +T  G V+++G   
Sbjct: 120 YGQCGEEPEKKDNTGRPPRRDIAIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWTWGQ-- 177

Query: 298 NFCLGHGEQHDELQPRAIQTF----RRKGIHVVR-VSAGDEHVVALDSSGYVYTWGKGYC 352
                         P  I       R +G+ +VR ++ G  H +AL   G ++ WG    
Sbjct: 178 -----------PWPPGDITQISVPVRVQGLDMVRLIAVGAFHNLALQEDGTLWAWGNNEY 226

Query: 353 GALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDR 412
           G LG GD   ++ P P+  L     V + A    +  L D G VYG+G    G LGF D 
Sbjct: 227 GQLGTGDTQPRSQPIPVQGLSGLTLVDIAAGGWHSTALTDNGEVYGWGRGEHGRLGFGDN 286

Query: 413 GVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLE 472
             S K++ P+ +  L    + QIS G  H+V VT  GR+F FG  +  +LG+       +
Sbjct: 287 DKSSKMV-PQKVQLLSGEEIVQISCGGTHSVAVTSDGRMFSFGRGDHGRLGYGRKVTTGQ 345

Query: 473 PTEIFI 478
           P E+ I
Sbjct: 346 PEEVPI 351



 Score = 92.0 bits (227), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 93/356 (26%), Positives = 147/356 (41%), Gaps = 42/356 (11%)

Query: 70  IYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLISNS 129
           I  G   + Q+ L N     W   ++ L+S ++   +V  S  ++ IT          + 
Sbjct: 8   IAWGSGEDGQLGLGNNEEREWVCAIKALES-QNVCSVVAGSRNSLAIT---------EDG 57

Query: 130 SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGD 189
            +F+ G +  G LGH   T      +++   S   +VQ +    H   V   G+ +  G 
Sbjct: 58  KLFTWGWNQRGTLGHPAGTKSENVPSQVKALSNVKIVQAAIGGWHCLAVDDQGRAYAWGG 117

Query: 190 NSSFCCGHR-----DTNRPIFR---------PRLVEALKGVPCKQVTAGLNFTGFLTIRG 235
           N    CG       +T RP  R         P+L+        +QV AG   +  LT  G
Sbjct: 118 NEYGQCGEEPEKKDNTGRPPRRDIAIPQRCAPKLI-------VRQVAAGGTHSVVLTREG 170

Query: 236 HVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 295
           HV T G         GD      P  +  L+    V  IA G  + LA+  +G ++++G+
Sbjct: 171 HVWTWGQ----PWPPGDITQISVPVRVQGLD---MVRLIAVGAFHNLALQEDGTLWAWGN 223

Query: 296 GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGAL 355
                LG G+     QP  +Q     G+ +V ++AG  H  AL  +G VY WG+G  G L
Sbjct: 224 NEYGQLGTGDTQPRSQPIPVQGL--SGLTLVDIAAGGWHSTALTDNGEVYGWGRGEHGRL 281

Query: 356 GHG--DEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGF 409
           G G  D+  K +P+ +  L     VQ+      +  +   G ++ FG    G LG+
Sbjct: 282 GFGDNDKSSKMVPQKVQLLSGEEIVQISCGGTHSVAVTSDGRMFSFGRGDHGRLGY 337


>gi|444516741|gb|ELV11274.1| E3 ubiquitin-protein ligase HERC2 [Tupaia chinensis]
          Length = 894

 Score =  117 bits (294), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 92/311 (29%), Positives = 151/311 (48%), Gaps = 24/311 (7%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V Q++ +E     + ++G+V+T   NS       DT      P+LV+ L      ++ A 
Sbjct: 496 VTQIACAEKRFLILSRNGRVYTQAYNS-------DT----LAPQLVQGLASRNIVKIAAH 544

Query: 225 LNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGS-VVQIAAGPS 279
            +   +L +   G V++ G    G+LGHGDT+    PK I+    ++ G  VV IA G +
Sbjct: 545 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGST 604

Query: 280 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS--AGDEHVVA 337
           Y  A+T  G +Y++G G+   LGHG   DE  P  +     KG+ V+ V+  +GD   +A
Sbjct: 605 YSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGL--KGLKVIDVACGSGDAQTLA 662

Query: 338 LDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVY 397
           +  +G V++WG G  G LG G       P+ +  L+    V+V    + +  L   G VY
Sbjct: 663 VTDNGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVY 722

Query: 398 GFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDN 457
            +G      LG    G  + V  P++L+ L+   V  ++ G  H + +T+   +  +G N
Sbjct: 723 SWGKGDNQRLG---HGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSN 779

Query: 458 ERAQLGHDTLR 468
           ++ Q   DTLR
Sbjct: 780 DQCQ-HFDTLR 789



 Score = 98.6 bits (244), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 88/324 (27%), Positives = 147/324 (45%), Gaps = 18/324 (5%)

Query: 50  PQKFRSLVDLAASQLCALHSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVET 109
           P +   L +L  +Q+      +  +SRN ++    +   +     + +Q +  S +IV+ 
Sbjct: 485 PIQCEGLANLGVTQIACAEKRFLILSRNGRV--YTQAYNSDTLAPQLVQGLA-SRNIVKI 541

Query: 110 SAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHG---PETTQCVSFTRINFPSAAHVV 166
           +A     + G ++  L +   V+S G    G LGHG   P     V        +  HVV
Sbjct: 542 AAH----SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVV 597

Query: 167 QVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN 226
            ++    ++A +   G+++T G  +    GH  +      P LV  LKG+    V  G  
Sbjct: 598 HIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVACGSG 656

Query: 227 FTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 284
               L +   G V + G   +G+LG G +    TPK I  L+++  VV++  G  + +A+
Sbjct: 657 DAQTLAVTDNGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL-DVVKVRCGSQFSIAL 715

Query: 285 TGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           T +G VYS+G G N  LGHG +     P+ ++    +G  V+ V+AG  H +AL     V
Sbjct: 716 TKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGL--QGKKVIDVAAGSTHCLALTEDSEV 773

Query: 345 YTWGKGYCGALGHGDEIDKTLPEP 368
           ++WG        H D +  T PEP
Sbjct: 774 HSWGSN--DQCQHFDTLRVTKPEP 795



 Score = 78.2 bits (191), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 59/219 (26%), Positives = 100/219 (45%), Gaps = 21/219 (9%)

Query: 271 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 330
           V QIA      L ++ NG VY+    S          D L P+ +Q    + I  +   +
Sbjct: 496 VTQIACAEKRFLILSRNGRVYTQAYNS----------DTLAPQLVQGLASRNIVKIAAHS 545

Query: 331 GDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLA----VQVCARKRK 386
              H +AL ++G VY+WG G  G LGHGD +    P+ +S+     A    V +      
Sbjct: 546 DGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTY 605

Query: 387 TFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVV 444
           +  +   G +Y +G   +G LG    G S+    P ++  L+   V  ++  +G   T+ 
Sbjct: 606 SAAITAEGELYTWGRGNYGRLG---HGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLA 662

Query: 445 VTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQEMEE 483
           VTD G+++ +GD +  +LG     GC  P    I+++++
Sbjct: 663 VTDNGQVWSWGDGDYGKLGRGGSDGCKTPK--LIEKLQD 699



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 52/169 (30%), Positives = 76/169 (44%), Gaps = 8/169 (4%)

Query: 118 TGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
           +G   TL ++ N  V+S G    G LG G  +  C +   I       VV+V      + 
Sbjct: 655 SGDAQTLAVTDNGQVWSWGDGDYGKLGRG-GSDGCKTPKLIEKLQDLDVVKVRCGSQFSI 713

Query: 177 FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
            + + GQV++ G   +   GH  T   +  P+L+E L+G     V AG      LT    
Sbjct: 714 ALTKDGQVYSWGKGDNQRLGH-GTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSE 772

Query: 237 VHTCGSNTHGQLGHGDTL--DRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
           VH+ GSN   Q  H DTL   +P P ++ P  +   +V IA GP+   A
Sbjct: 773 VHSWGSNDQCQ--HFDTLRVTKPEPAAL-PGLDTKHIVGIACGPAQSFA 818


>gi|408500692|ref|YP_006864611.1| RCC1 repeat-containing protein [Bifidobacterium asteroides PRL2011]
 gi|408465516|gb|AFU71045.1| RCC1 repeat-containing protein [Bifidobacterium asteroides PRL2011]
          Length = 1279

 Score =  117 bits (294), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 96/372 (25%), Positives = 169/372 (45%), Gaps = 35/372 (9%)

Query: 119  GRYHTLLISNSSVFSCGSSLCGVLGHGP-ETTQCVSFTRINFPSAAH----VVQVSASEN 173
            G +   + S+ + ++ G++  G L   P + +   +  RI  P  A       QV+A ++
Sbjct: 801  GSFSIGVASDGNAYAWGNNKYGQLAQKPADVSMQKTPVRIPLPDGADSSFTYTQVAAGDS 860

Query: 174  HAAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVPCK--QVTAGLNFTGF 230
            H   +  +G V++ G N     G    T+R  + P+ V+   G P K  QV+AG+  +  
Sbjct: 861  HVLAIGSNGIVYSWGRNDHGQLGDGTTTDR--YNPQPVKDTGGQPFKAVQVSAGVADSAA 918

Query: 231  LTIRGHVHTCGSNTHGQ---LGHGDTLDRPTPKSIAPLEEVGSV---VQIAAGPSYMLAV 284
            +     V+T GS + G+     +  T   PTP   A  +  G     VQ++   S+++A+
Sbjct: 919  IDSENRVYTWGSESTGKGQTPAYSTTRKNPTPA--ADPDNPGQTLHAVQVSLNWSFVMAL 976

Query: 285  TGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
              +G VY++G  +N  LG+G                +     ++SAG  H +A+D+ G  
Sbjct: 977  DADGNVYTWGYNTNGQLGNGTSDSTSYASNPARLPSQSFQASQISAGSWHALAIDTDGNT 1036

Query: 345  YTWGKGYCGALGHGDEIDKTLPE----PLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 400
            +TWG    G LG G   DK  P+    P  + +S  A Q+ A    + V+   GS++ +G
Sbjct: 1037 WTWGYNGYGQLGDGSTSDKYKPQTVQNPTDTSQSLKATQISAGVDHSLVVDRDGSLWAWG 1096

Query: 401  WMGFGSLGFPDR-------GVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFG 453
            W   G LG  +         + D   + +   ++R+      S G  H++ +   G L+ 
Sbjct: 1097 WNSNGQLGIGNTVNQTKPATIKDPANKAQTFKAVRS------SAGQLHSLAIRQDGNLWA 1150

Query: 454  FGDNERAQLGHD 465
            +GDN+  QLG++
Sbjct: 1151 WGDNQYGQLGNN 1162



 Score =  102 bits (253), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 84/277 (30%), Positives = 128/277 (46%), Gaps = 19/277 (6%)

Query: 214  KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGH--GDTLDRPTPKSIAPLEEVG-- 269
            +G+   QV+AG +F+  +   G+ +  G+N +GQL     D   + TP  I PL +    
Sbjct: 790  RGIRFDQVSAGGSFSIGVASDGNAYAWGNNKYGQLAQKPADVSMQKTPVRI-PLPDGADS 848

Query: 270  --SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVR 327
              +  Q+AAG S++LA+  NG+VYS+G   +  LG G   D   P+ ++    +    V+
Sbjct: 849  SFTYTQVAAGDSHVLAIGSNGIVYSWGRNDHGQLGDGTTTDRYNPQPVKDTGGQPFKAVQ 908

Query: 328  VSAGDEHVVALDSSGYVYTW-----GKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCA 382
            VSAG     A+DS   VYTW     GKG   A     +      +P +  ++  AVQV  
Sbjct: 909  VSAGVADSAAIDSENRVYTWGSESTGKGQTPAYSTTRKNPTPAADPDNPGQTLHAVQVSL 968

Query: 383  RKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDK---VLRPRILDSLRAHHVSQISTGL 439
                   L   G+VY +G+   G LG    G SD       P  L S ++   SQIS G 
Sbjct: 969  NWSFVMALDADGNVYTWGYNTNGQLG---NGTSDSTSYASNPARLPS-QSFQASQISAGS 1024

Query: 440  YHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 476
            +H + +   G  + +G N   QLG  +     +P  +
Sbjct: 1025 WHALAIDTDGNTWTWGYNGYGQLGDGSTSDKYKPQTV 1061



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 59/217 (27%), Positives = 94/217 (43%), Gaps = 14/217 (6%)

Query: 160 PSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNR-----PIFRPRLVEALK 214
           P      QVSA   H   V   G +++ G N     G   T       P+ +P+ V   +
Sbjct: 231 PRGIRFSQVSAGRGHILAVASDGNLYSWGSNDHGQLGDGTTAERHEPVPVKKPQGVS--Q 288

Query: 215 GVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS---V 271
                Q +AG  F+  L   G +++ G NT+GQLG+  T    TP+ +   +   S    
Sbjct: 289 DFTWVQASAGYLFSVGLGSDGKLYSWGDNTYGQLGNNTTTAHYTPEPVNLPQNAPSGFTW 348

Query: 272 VQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHG---EQHDELQPRAIQTFRRKGIHVVRV 328
            Q A G  + L +  +G +YS+G   +  LG G   E+H  +Q + + +    G    ++
Sbjct: 349 KQEAVGSLHALGLGSDGNLYSWGDNDHNQLGDGTTTERHAPIQVK-MPSGVPSGFAWKQM 407

Query: 329 SAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTL 365
           S    H +AL S  ++Y WG    G +G G   D  +
Sbjct: 408 SGWGWHSLALGSDNWIYGWGANTRGEVGTGSITDNKI 444



 Score = 63.2 bits (152), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 96/376 (25%), Positives = 158/376 (42%), Gaps = 29/376 (7%)

Query: 115 QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAH----VVQVS 169
           Q++ GR H L + S+ +++S GS+  G LG G  T +      +  P         VQ S
Sbjct: 238 QVSAGRGHILAVASDGNLYSWGSNDHGQLGDG-TTAERHEPVPVKKPQGVSQDFTWVQAS 296

Query: 170 ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTN-----RPIFRPRLVEALKGVPCKQVTAG 224
           A    +  +   G++++ GDN+    G+  T       P+  P+   A  G   KQ   G
Sbjct: 297 AGYLFSVGLGSDGKLYSWGDNTYGQLGNNTTTAHYTPEPVNLPQ--NAPSGFTWKQEAVG 354

Query: 225 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS---VVQIAAGPSYM 281
                 L   G++++ G N H QLG G T +R  P  +     V S     Q++    + 
Sbjct: 355 SLHALGLGSDGNLYSWGDNDHNQLGDGTTTERHAPIQVKMPSGVPSGFAWKQMSGWGWHS 414

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHD-ELQPRAIQTFR--RKGIHVVRVSAGDEHVVAL 338
           LA+  +  +Y +G+ +   +G G   D ++ P  I T +         +   GD +  A+
Sbjct: 415 LALGSDNWIYGWGANTRGEVGTGSITDNKITPVRIATPQGVPSNFTWGQFQMGDYYSQAI 474

Query: 339 DSSGYVYTWGKGYCGALGHGDEIDKTLP----EPLSSLKSHLAVQVCARKRKTFVLVDTG 394
            S G +YTWG G  G +G+G  +D   P    +P   L +    QV      +  +   G
Sbjct: 475 GSDGNIYTWGYGGNGNVGNGSTVDVYGPTQAHKPNGVLPNFSWKQVSLLSVASLAIGSDG 534

Query: 395 SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAH---HVSQISTGL-YHTVVVTDRGR 450
           ++Y +G    G LG  D   + +    R+     A       Q S G   ++  +   G 
Sbjct: 535 NLYSWGANNNGQLG--DNTTTQRNTPIRVAAPQNAPTGLTWVQASAGWDNNSFGLASDGN 592

Query: 451 LFGFGDNERAQLGHDT 466
           L+ +G N   QLG +T
Sbjct: 593 LYSWGKNANGQLGDNT 608



 Score = 59.3 bits (142), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 52/196 (26%), Positives = 88/196 (44%), Gaps = 9/196 (4%)

Query: 214 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG---S 270
           +G+   QV+AG      +   G++++ GSN HGQLG G T +R  P  +   + V    +
Sbjct: 232 RGIRFSQVSAGRGHILAVASDGNLYSWGSNDHGQLGDGTTAERHEPVPVKKPQGVSQDFT 291

Query: 271 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHG--EQHDELQPRAIQTFRRKGIHVVRV 328
            VQ +AG  + + +  +G +YS+G  +   LG+     H   +P  +      G    + 
Sbjct: 292 WVQASAGYLFSVGLGSDGKLYSWGDNTYGQLGNNTTTAHYTPEPVNLPQNAPSGFTWKQE 351

Query: 329 SAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP---EPLSSLKSHLAV-QVCARK 384
           + G  H + L S G +Y+WG      LG G   ++  P   +  S + S  A  Q+    
Sbjct: 352 AVGSLHALGLGSDGNLYSWGDNDHNQLGDGTTTERHAPIQVKMPSGVPSGFAWKQMSGWG 411

Query: 385 RKTFVLVDTGSVYGFG 400
             +  L     +YG+G
Sbjct: 412 WHSLALGSDNWIYGWG 427



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 46/189 (24%), Positives = 92/189 (48%), Gaps = 9/189 (4%)

Query: 125  LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAA-HVVQVSASENHAAFVLQSGQ 183
            L ++ +V++ G +  G LG+G   +   +      PS +    Q+SA   HA  +   G 
Sbjct: 976  LDADGNVYTWGYNTNGQLGNGTSDSTSYASNPARLPSQSFQASQISAGSWHALAIDTDGN 1035

Query: 184  VFTCGDNSSFCCGHRDTNRPIFRPRLV----EALKGVPCKQVTAGLNFTGFLTIRGHVHT 239
             +T G N     G   T+   ++P+ V    +  + +   Q++AG++ +  +   G +  
Sbjct: 1036 TWTWGYNGYGQLGDGSTSD-KYKPQTVQNPTDTSQSLKATQISAGVDHSLVVDRDGSLWA 1094

Query: 240  CGSNTHGQLGHGDTLDRPTPKSI---APLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 296
             G N++GQLG G+T+++  P +I   A   +    V+ +AG  + LA+  +G ++++G  
Sbjct: 1095 WGWNSNGQLGIGNTVNQTKPATIKDPANKAQTFKAVRSSAGQLHSLAIRQDGNLWAWGDN 1154

Query: 297  SNFCLGHGE 305
                LG+ +
Sbjct: 1155 QYGQLGNNQ 1163



 Score = 52.4 bits (124), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 44/162 (27%), Positives = 71/162 (43%), Gaps = 7/162 (4%)

Query: 321 KGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSL----KSHL 376
           +GI   +VSAG  H++A+ S G +Y+WG    G LG G   ++  P P+       +   
Sbjct: 232 RGIRFSQVSAGRGHILAVASDGNLYSWGSNDHGQLGDGTTAERHEPVPVKKPQGVSQDFT 291

Query: 377 AVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRIL--DSLRAHHVSQ 434
            VQ  A    +  L   G +Y +G   +G LG  +   +     P  L  ++       Q
Sbjct: 292 WVQASAGYLFSVGLGSDGKLYSWGDNTYGQLGN-NTTTAHYTPEPVNLPQNAPSGFTWKQ 350

Query: 435 ISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 476
            + G  H + +   G L+ +GDN+  QLG  T      P ++
Sbjct: 351 EAVGSLHALGLGSDGNLYSWGDNDHNQLGDGTTTERHAPIQV 392



 Score = 47.0 bits (110), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 70/273 (25%), Positives = 119/273 (43%), Gaps = 28/273 (10%)

Query: 115 QITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAH----VVQVS 169
           Q   G  H L L S+ +++S G +    LG G  TT+  +  ++  PS         Q+S
Sbjct: 350 QEAVGSLHALGLGSDGNLYSWGDNDHNQLGDG-TTTERHAPIQVKMPSGVPSGFAWKQMS 408

Query: 170 ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCK----QVTAGL 225
               H+  +     ++  G N+    G          P  +   +GVP      Q   G 
Sbjct: 409 GWGWHSLALGSDNWIYGWGANTRGEVGTGSITDNKITPVRIATPQGVPSNFTWGQFQMGD 468

Query: 226 NFTGFLTIRGHVHTCGSNTHGQLGHGDTLD--RPT----PKSIAP---LEEVGSVVQIAA 276
            ++  +   G+++T G   +G +G+G T+D   PT    P  + P    ++V S++ +A+
Sbjct: 469 YYSQAIGSDGNIYTWGYGGNGNVGNGSTVDVYGPTQAHKPNGVLPNFSWKQV-SLLSVAS 527

Query: 277 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRK--GIHVVRVSAG-DE 333
                LA+  +G +YS+G+ +N  LG         P  +   +    G+  V+ SAG D 
Sbjct: 528 -----LAIGSDGNLYSWGANNNGQLGDNTTTQRNTPIRVAAPQNAPTGLTWVQASAGWDN 582

Query: 334 HVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP 366
           +   L S G +Y+WGK   G LG     D+ +P
Sbjct: 583 NSFGLASDGNLYSWGKNANGQLGDNTTNDRHIP 615



 Score = 42.7 bits (99), Expect = 0.46,   Method: Compositional matrix adjust.
 Identities = 48/170 (28%), Positives = 77/170 (45%), Gaps = 22/170 (12%)

Query: 115  QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHVV 166
            QI+ G +H L I ++ + ++ G +  G LG G       P+T Q  + T  +        
Sbjct: 1019 QISAGSWHALAIDTDGNTWTWGYNGYGQLGDGSTSDKYKPQTVQNPTDTSQSL----KAT 1074

Query: 167  QVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDT-NRPIFRPRLVE--ALKGVPCKQVTA 223
            Q+SA  +H+  V + G ++  G NS+   G  +T N+   +P  ++  A K    K V +
Sbjct: 1075 QISAGVDHSLVVDRDGSLWAWGWNSNGQLGIGNTVNQ--TKPATIKDPANKAQTFKAVRS 1132

Query: 224  GLNFTGFLTIR--GHVHTCGSNTHGQLGHGDTLDR---PTPKSIAPLEEV 268
                   L IR  G++   G N +GQLG+  T  R   P P +  P   V
Sbjct: 1133 SAGQLHSLAIRQDGNLWAWGDNQYGQLGNNQTATRNTTPMPVAFDPTPLV 1182


>gi|355749434|gb|EHH53833.1| Putative E3 ubiquitin-protein ligase HERC6 [Macaca fascicularis]
          Length = 1020

 Score =  117 bits (294), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 89/274 (32%), Positives = 131/274 (47%), Gaps = 8/274 (2%)

Query: 193 FCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGD 252
           FC G   T+    + R  E   G    Q  +G   +  L     V +CG N+ GQLG   
Sbjct: 3   FCWG---TDSRELQRRRTERSPGAELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRR 59

Query: 253 TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGE-QHDELQ 311
                 P+ I  LE + +V  ++ G  + LAV   G V+++G+GS   LG GE +     
Sbjct: 60  APRGELPEPIQALETL-NVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFT 118

Query: 312 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEI-DKTLPEPLS 370
           P+ I T    GI +++VS G  H +AL     V++WGK   G LG G E+  +  P+ + 
Sbjct: 119 PKKITTL--NGIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEVPSQASPQRVR 176

Query: 371 SLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAH 430
           SL+     QV A    +F L   G+ +G+G    G L    R V  +  +P  + +L+  
Sbjct: 177 SLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSIGALKNL 236

Query: 431 HVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 464
            V  IS G  HT V+   G++F FGDN   QLG+
Sbjct: 237 GVIYISCGDEHTAVLIQDGKVFTFGDNSSGQLGY 270



 Score =  103 bits (256), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 88/302 (29%), Positives = 148/302 (49%), Gaps = 20/302 (6%)

Query: 163 AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 222
           A ++Q ++ E H+  +L + +V +CGDNS    G R   R    P  ++AL+ +    V+
Sbjct: 23  AELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRRAPRGEL-PEPIQALETLNVDLVS 81

Query: 223 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRP-TPKSIAPLEEVGSVVQIAAGPSYM 281
            G   +  +  +G V   G+ + GQLG G+  +   TPK I  L  +  ++Q++ G  + 
Sbjct: 82  CGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKITTLNGI-KIIQVSCGHYHS 140

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQ-HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 340
           LA++ +  V+S+G  S+  LG G++   +  P+ +++   +GI + +V+AG  H  AL  
Sbjct: 141 LALSKDSQVFSWGKNSHGQLGLGKEVPSQASPQRVRSL--EGIPLAQVAAGGAHSFALSL 198

Query: 341 SGYVYTWGKGYCGAL---GHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVY 397
            G  + WG    G L   G    +    P  + +LK+   + +      T VL+  G V+
Sbjct: 199 CGTSFGWGSNSAGQLALSGRNVPVQSNKPLSIGALKNLGVIYISCGDEHTAVLIQDGKVF 258

Query: 398 GFGWMGFGSLGF---PDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV-VTDRGRLFG 453
            FG    G LG+   P++     V R   +D L    VSQI  G YHT+  V   G++  
Sbjct: 259 TFGDNSSGQLGYSPTPEKRGPQLVER---IDGL----VSQIDCGSYHTLAYVHTTGQVIS 311

Query: 454 FG 455
           FG
Sbjct: 312 FG 313



 Score = 92.8 bits (229), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 82/299 (27%), Positives = 134/299 (44%), Gaps = 23/299 (7%)

Query: 114 MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHV 165
           +Q  +G  H+LL+ +N  V SCG +  G LG         PE  Q +    ++       
Sbjct: 26  LQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRRAPRGELPEPIQALETLNVDL------ 79

Query: 166 VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 225
             VS  + H+  V   G+VF  G  S    G  +     F P+ +  L G+   QV+ G 
Sbjct: 80  --VSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKITTLNGIKIIQVSCGH 137

Query: 226 NFTGFLTIRGHVHTCGSNTHGQLGHGDTL-DRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 284
             +  L+    V + G N+HGQLG G  +  + +P+ +  LE +  + Q+AAG ++  A+
Sbjct: 138 YHSLALSKDSQVFSWGKNSHGQLGLGKEVPSQASPQRVRSLEGI-PLAQVAAGGAHSFAL 196

Query: 285 TGNGVVYSFGSGSNFCLGHGEQHDELQ---PRAIQTFRRKGIHVVRVSAGDEHVVALDSS 341
           +  G  + +GS S   L    ++  +Q   P +I   +  G  V+ +S GDEH   L   
Sbjct: 197 SLCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSIGALKNLG--VIYISCGDEHTAVLIQD 254

Query: 342 GYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 400
           G V+T+G    G LG+    +K  P+ +  +   ++   C        +  TG V  FG
Sbjct: 255 GKVFTFGDNSSGQLGYSPTPEKRGPQLVERIDGLVSQIDCGSYHTLAYVHTTGQVISFG 313


>gi|224179015|gb|AAI72191.1| hect domain and RLD 2 [synthetic construct]
          Length = 2427

 Score =  117 bits (294), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 92/311 (29%), Positives = 151/311 (48%), Gaps = 24/311 (7%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V Q++ +E     + ++G+V+T   NS       DT      P+LV+ L      ++ A 
Sbjct: 453 VTQIACAEKRFLILSRNGRVYTQAYNS-------DT----LAPQLVQGLASRNIVKIAAH 501

Query: 225 LNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGS-VVQIAAGPS 279
            +   +L +   G V++ G    G+LGHGDT+    PK I+    ++ G  VV IA G +
Sbjct: 502 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGST 561

Query: 280 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS--AGDEHVVA 337
           Y  A+T  G +Y++G G+   LGHG   DE  P  +     KG+ V+ V+  +GD   +A
Sbjct: 562 YSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGL--KGLKVIDVACGSGDAQTLA 619

Query: 338 LDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVY 397
           +  +G V++WG G  G LG G       P+ +  L+    V+V    + +  L   G VY
Sbjct: 620 VTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVY 679

Query: 398 GFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDN 457
            +G      LG    G  + V  P++L+ L+   V  ++ G  H + +T+   +  +G N
Sbjct: 680 SWGKGDNQRLG---HGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSN 736

Query: 458 ERAQLGHDTLR 468
           ++ Q   DTLR
Sbjct: 737 DQCQ-HFDTLR 746



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 80/275 (29%), Positives = 128/275 (46%), Gaps = 23/275 (8%)

Query: 103 SSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHG-------PETTQCVSFT 155
           S +IV+ +A     + G ++  L +   V+S G    G LGHG       P+     S  
Sbjct: 492 SRNIVKIAAH----SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGK 547

Query: 156 RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 215
           +    +  HVV ++    ++A +   G+++T G  +    GH  +      P LV  LKG
Sbjct: 548 Q----AGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAI-PMLVAGLKG 602

Query: 216 VPCKQVTAGLNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
           +    V  G      L +   G V + G   +G+LG G +    TPK I  L+++  VV+
Sbjct: 603 LKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL-DVVK 661

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           +  G  + +A+T +G VYS+G G N  LGHG +     P+ ++    +G  V+ V+AG  
Sbjct: 662 VRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGL--QGKKVIDVAAGST 719

Query: 334 HVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEP 368
           H +AL     V++WG        H D +  T PEP
Sbjct: 720 HCLALTEDSEVHSWGSN--DQCQHFDTLRVTKPEP 752



 Score = 76.3 bits (186), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 58/212 (27%), Positives = 95/212 (44%), Gaps = 19/212 (8%)

Query: 271 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 330
           V QIA      L ++ NG VY+    S          D L P+ +Q    + I  +   +
Sbjct: 453 VTQIACAEKRFLILSRNGRVYTQAYNS----------DTLAPQLVQGLASRNIVKIAAHS 502

Query: 331 GDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLA----VQVCARKRK 386
              H +AL ++G VY+WG G  G LGHGD +    P+ +S+     A    V +      
Sbjct: 503 DGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTY 562

Query: 387 TFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVV 444
           +  +   G +Y +G   +G LG    G S+    P ++  L+   V  ++  +G   T+ 
Sbjct: 563 SAAITAEGELYTWGRGNYGRLG---HGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLA 619

Query: 445 VTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 476
           VT+ G+++ +GD +  +LG     GC  P  I
Sbjct: 620 VTENGQVWSWGDGDYGKLGRGGSDGCKTPKLI 651



 Score = 53.1 bits (126), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 52/169 (30%), Positives = 76/169 (44%), Gaps = 8/169 (4%)

Query: 118 TGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
           +G   TL ++ N  V+S G    G LG G  +  C +   I       VV+V      + 
Sbjct: 612 SGDAQTLAVTENGQVWSWGDGDYGKLGRG-GSDGCKTPKLIEKLQDLDVVKVRCGSQFSI 670

Query: 177 FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
            + + GQV++ G   +   GH  T   +  P+L+E L+G     V AG      LT    
Sbjct: 671 ALTKDGQVYSWGKGDNQRLGH-GTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSE 729

Query: 237 VHTCGSNTHGQLGHGDTL--DRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
           VH+ GSN   Q  H DTL   +P P ++  L +   +V IA GP+   A
Sbjct: 730 VHSWGSNDQCQ--HFDTLRVTKPEPAALPGL-DTKHIVGIACGPAQSFA 775


>gi|350593458|ref|XP_003483691.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like, partial [Sus
           scrofa]
          Length = 969

 Score =  117 bits (294), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 92/311 (29%), Positives = 151/311 (48%), Gaps = 24/311 (7%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V Q++ +E     + ++G+V+T   NS       DT      P+LV+ L      ++ A 
Sbjct: 650 VTQIACAEKRFLILSRNGRVYTQAYNS-------DT----LAPQLVQGLASRNIIKIAAH 698

Query: 225 LNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGS-VVQIAAGPS 279
            +   +L +   G V++ G    G+LGHGDT+    PK I+    ++ G  VV IA G +
Sbjct: 699 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGST 758

Query: 280 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS--AGDEHVVA 337
           Y  A+T  G +Y++G G+   LGHG   DE  P  +     KG+ V+ V+  +GD   +A
Sbjct: 759 YSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGL--KGLKVIDVACGSGDAQTLA 816

Query: 338 LDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVY 397
           +  +G V++WG G  G LG G       P+ +  L+    V+V    + +  L   G VY
Sbjct: 817 VTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVY 876

Query: 398 GFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDN 457
            +G      LG    G  + V  P++L+ L+   V  ++ G  H + +T+   +  +G N
Sbjct: 877 SWGKGDNQRLGH---GTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSN 933

Query: 458 ERAQLGHDTLR 468
           ++ Q   DTLR
Sbjct: 934 DQCQ-HFDTLR 943



 Score = 98.2 bits (243), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 87/324 (26%), Positives = 147/324 (45%), Gaps = 18/324 (5%)

Query: 50  PQKFRSLVDLAASQLCALHSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVET 109
           P +   L +L  +Q+      +  +SRN ++    +   +     + +Q +  S +I++ 
Sbjct: 639 PIQCEGLANLGVTQIACAEKRFLILSRNGRV--YTQAYNSDTLAPQLVQGLA-SRNIIKI 695

Query: 110 SAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHG---PETTQCVSFTRINFPSAAHVV 166
           +A     + G ++  L +   V+S G    G LGHG   P     V        +  HVV
Sbjct: 696 AAH----SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVV 751

Query: 167 QVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN 226
            ++    ++A +   G+++T G  +    GH  +      P LV  LKG+    V  G  
Sbjct: 752 HIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVACGSG 810

Query: 227 FTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 284
               L +   G V + G   +G+LG G +    TPK I  L+++  VV++  G  + +A+
Sbjct: 811 DAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL-DVVKVRCGSQFSIAL 869

Query: 285 TGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           T +G VYS+G G N  LGHG +     P+ ++    +G  V+ V+AG  H +AL     V
Sbjct: 870 TKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGL--QGKKVIDVAAGSTHCLALTEDSEV 927

Query: 345 YTWGKGYCGALGHGDEIDKTLPEP 368
           ++WG        H D +  T PEP
Sbjct: 928 HSWGSN--DQCQHFDTLRVTKPEP 949



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 58/219 (26%), Positives = 100/219 (45%), Gaps = 21/219 (9%)

Query: 271 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 330
           V QIA      L ++ NG VY+    S          D L P+ +Q    + I  +   +
Sbjct: 650 VTQIACAEKRFLILSRNGRVYTQAYNS----------DTLAPQLVQGLASRNIIKIAAHS 699

Query: 331 GDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLA----VQVCARKRK 386
              H +AL ++G VY+WG G  G LGHGD +    P+ +S+     A    V +      
Sbjct: 700 DGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTY 759

Query: 387 TFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVV 444
           +  +   G +Y +G   +G LG    G S+    P ++  L+   V  ++  +G   T+ 
Sbjct: 760 SAAITAEGELYTWGRGNYGRLGH---GSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLA 816

Query: 445 VTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQEMEE 483
           VT+ G+++ +GD +  +LG     GC  P    I+++++
Sbjct: 817 VTENGQVWSWGDGDYGKLGRGGSDGCKTPK--LIEKLQD 853



 Score = 53.5 bits (127), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 51/165 (30%), Positives = 75/165 (45%), Gaps = 8/165 (4%)

Query: 118 TGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
           +G   TL ++ N  V+S G    G LG G  +  C +   I       VV+V      + 
Sbjct: 809 SGDAQTLAVTENGQVWSWGDGDYGKLGRG-GSDGCKTPKLIEKLQDLDVVKVRCGSQFSI 867

Query: 177 FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
            + + GQV++ G   +   GH  T   +  P+L+E L+G     V AG      LT    
Sbjct: 868 ALTKDGQVYSWGKGDNQRLGH-GTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSE 926

Query: 237 VHTCGSNTHGQLGHGDTL--DRPTPKSIAPLEEVGSVVQIAAGPS 279
           VH+ GSN   Q  H DTL   +P P ++  L +   +V IA GP+
Sbjct: 927 VHSWGSNDQCQ--HFDTLRVTKPEPSALPGL-DTKHIVGIACGPA 968


>gi|119578072|gb|EAW57668.1| hCG2006901, isoform CRA_e [Homo sapiens]
          Length = 2948

 Score =  117 bits (294), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 92/311 (29%), Positives = 151/311 (48%), Gaps = 24/311 (7%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V Q++ +E     + ++G+V+T   NS       DT      P+LV+ L      ++ A 
Sbjct: 415 VTQIACAEKRFLILSRNGRVYTQAYNS-------DT----LAPQLVQGLASRNIVKIAAH 463

Query: 225 LNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGS-VVQIAAGPS 279
            +   +L +   G V++ G    G+LGHGDT+    PK I+    ++ G  VV IA G +
Sbjct: 464 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGST 523

Query: 280 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS--AGDEHVVA 337
           Y  A+T  G +Y++G G+   LGHG   DE  P  +     KG+ V+ V+  +GD   +A
Sbjct: 524 YSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGL--KGLKVIDVACGSGDAQTLA 581

Query: 338 LDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVY 397
           +  +G V++WG G  G LG G       P+ +  L+    V+V    + +  L   G VY
Sbjct: 582 VTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVY 641

Query: 398 GFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDN 457
            +G      LG    G  + V  P++L+ L+   V  ++ G  H + +T+   +  +G N
Sbjct: 642 SWGKGDNQRLG---HGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSN 698

Query: 458 ERAQLGHDTLR 468
           ++ Q   DTLR
Sbjct: 699 DQCQ-HFDTLR 708



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 88/328 (26%), Positives = 149/328 (45%), Gaps = 26/328 (7%)

Query: 50  PQKFRSLVDLAASQLCALHSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVET 109
           P +   L +L  +Q+      +  +SRN ++    +   +     + +Q +  S +IV+ 
Sbjct: 404 PIQCEGLANLGVTQIACAEKRFLILSRNGRV--YTQAYNSDTLAPQLVQGLA-SRNIVKI 460

Query: 110 SAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSA 162
           +A     + G ++  L +   V+S G    G LGHG       P+     S  +    + 
Sbjct: 461 AAH----SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQ----AG 512

Query: 163 AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 222
            HVV ++    ++A +   G+++T G  +    GH  +      P LV  LKG+    V 
Sbjct: 513 KHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVA 571

Query: 223 AGLNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 280
            G      L +   G V + G   +G+LG G +    TPK I  L+++  VV++  G  +
Sbjct: 572 CGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL-DVVKVRCGSQF 630

Query: 281 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 340
            +A+T +G VYS+G G N  LGHG +     P+ ++    +G  V+ V+AG  H +AL  
Sbjct: 631 SIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGL--QGKKVIDVAAGSTHCLALTE 688

Query: 341 SGYVYTWGKGYCGALGHGDEIDKTLPEP 368
              V++WG        H D +  T PEP
Sbjct: 689 DSEVHSWGSN--DQCQHFDTLRVTKPEP 714



 Score = 75.9 bits (185), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 58/212 (27%), Positives = 95/212 (44%), Gaps = 19/212 (8%)

Query: 271 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 330
           V QIA      L ++ NG VY+    S          D L P+ +Q    + I  +   +
Sbjct: 415 VTQIACAEKRFLILSRNGRVYTQAYNS----------DTLAPQLVQGLASRNIVKIAAHS 464

Query: 331 GDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLA----VQVCARKRK 386
              H +AL ++G VY+WG G  G LGHGD +    P+ +S+     A    V +      
Sbjct: 465 DGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTY 524

Query: 387 TFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVV 444
           +  +   G +Y +G   +G LG    G S+    P ++  L+   V  ++  +G   T+ 
Sbjct: 525 SAAITAEGELYTWGRGNYGRLG---HGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLA 581

Query: 445 VTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 476
           VT+ G+++ +GD +  +LG     GC  P  I
Sbjct: 582 VTENGQVWSWGDGDYGKLGRGGSDGCKTPKLI 613



 Score = 53.1 bits (126), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 52/169 (30%), Positives = 76/169 (44%), Gaps = 8/169 (4%)

Query: 118 TGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
           +G   TL ++ N  V+S G    G LG G  +  C +   I       VV+V      + 
Sbjct: 574 SGDAQTLAVTENGQVWSWGDGDYGKLGRG-GSDGCKTPKLIEKLQDLDVVKVRCGSQFSI 632

Query: 177 FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
            + + GQV++ G   +   GH  T   +  P+L+E L+G     V AG      LT    
Sbjct: 633 ALTKDGQVYSWGKGDNQRLGH-GTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSE 691

Query: 237 VHTCGSNTHGQLGHGDTL--DRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
           VH+ GSN   Q  H DTL   +P P ++  L +   +V IA GP+   A
Sbjct: 692 VHSWGSNDQCQ--HFDTLRVTKPEPAALPGL-DTKHIVGIACGPAQSFA 737


>gi|449681031|ref|XP_002154536.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like, partial
           [Hydra magnipapillata]
          Length = 1132

 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 93/342 (27%), Positives = 164/342 (47%), Gaps = 13/342 (3%)

Query: 105 DIVETSAGNMQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAA 163
           ++V T     +I  G+  T L+ +N SVF+CG    G LG G    +  S   I      
Sbjct: 313 NLVSTFKQVREIVCGQNCTFLLQTNGSVFACGEGTYGRLGQGTSDDE-HSLVPITELQGY 371

Query: 164 HVVQVSAS---ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQ 220
            ++Q++ S   + H   V  SG+VF+ GD      GH ++ R   +P+ + AL+     Q
Sbjct: 372 CIIQLATSLGGDGHTLAVADSGEVFSWGDGDYGKLGHGNSERQ-RKPKQIIALQAEHVVQ 430

Query: 221 VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 280
            + G   +  LT  G V T G   +G LG G    + TP+ I  L+    + QIA G  +
Sbjct: 431 ASCGFKHSAVLTKDGKVFTFGQGQYGILGDGGNSPQKTPQLILSLKN-EHISQIACGKDH 489

Query: 281 MLAVTGNGV-VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 339
            LA+  NG  +Y++G G    LG G       P  + ++R   + + +++ G +  + L 
Sbjct: 490 TLALANNGKKLYAWGDGEFGKLGLGSTSVRSIPNLVDSYR--NVCLKKIACGSKFSIVLA 547

Query: 340 SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGF 399
           ++GY+YT+G      +   D +D T+P+ +SSL  H  + +         L ++G+++G+
Sbjct: 548 TNGYLYTFGHKDFLGIAETDLLDNTIPQIVSSLMPHPIIDIAVGCNYILALDNSGNIWGW 607

Query: 400 GWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYH 441
           G    G LG    G ++    P+++ +    +++++S G  H
Sbjct: 608 GTNEEGQLGI---GTTNPHYLPQLVCTFSGTNITRLSAGTTH 646



 Score =  112 bits (281), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 93/339 (27%), Positives = 164/339 (48%), Gaps = 16/339 (4%)

Query: 130 SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQS-GQVFTCG 188
           +V+  GS++ G L  G +   C+   + N  S    V+      +  F+LQ+ G VF CG
Sbjct: 289 TVYVWGSNIHGELP-GLQGKTCL---QPNLVSTFKQVREIVCGQNCTFLLQTNGSVFACG 344

Query: 189 DNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF---LTIRGHVHTCGSNTH 245
           + +    G   ++       + E L+G    Q+   L   G    +   G V + G   +
Sbjct: 345 EGTYGRLGQGTSDDEHSLVPITE-LQGYCIIQLATSLGGDGHTLAVADSGEVFSWGDGDY 403

Query: 246 GQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGE 305
           G+LGHG++  +  PK I  L+    VVQ + G  +   +T +G V++FG G    LG G 
Sbjct: 404 GKLGHGNSERQRKPKQIIALQ-AEHVVQASCGFKHSAVLTKDGKVFTFGQGQYGILGDGG 462

Query: 306 QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY-VYTWGKGYCGALGHGDEIDKT 364
              +  P+ I + + +  H+ +++ G +H +AL ++G  +Y WG G  G LG G    ++
Sbjct: 463 NSPQKTPQLILSLKNE--HISQIACGKDHTLALANNGKKLYAWGDGEFGKLGLGSTSVRS 520

Query: 365 LPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRIL 424
           +P  + S ++    ++    + + VL   G +Y FG   F  LG  +  + D  + P+I+
Sbjct: 521 IPNLVDSYRNVCLKKIACGSKFSIVLATNGYLYTFGHKDF--LGIAETDLLDNTI-PQIV 577

Query: 425 DSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 463
            SL  H +  I+ G  + + + + G ++G+G NE  QLG
Sbjct: 578 SSLMPHPIIDIAVGCNYILALDNSGNIWGWGTNEEGQLG 616



 Score = 47.8 bits (112), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 42/142 (29%), Positives = 64/142 (45%), Gaps = 8/142 (5%)

Query: 344 VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 403
           VY WG    G L          P  +S+ K    + VC +   TF+L   GSV+  G   
Sbjct: 290 VYVWGSNIHGELPGLQGKTCLQPNLVSTFKQVREI-VCGQN-CTFLLQTNGSVFACGEGT 347

Query: 404 FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLY---HTVVVTDRGRLFGFGDNERA 460
           +G LG   +G SD       +  L+ + + Q++T L    HT+ V D G +F +GD +  
Sbjct: 348 YGRLG---QGTSDDEHSLVPITELQGYCIIQLATSLGGDGHTLAVADSGEVFSWGDGDYG 404

Query: 461 QLGHDTLRGCLEPTEIFIQEME 482
           +LGH       +P +I   + E
Sbjct: 405 KLGHGNSERQRKPKQIIALQAE 426


>gi|198421625|ref|XP_002120080.1| PREDICTED: similar to mCG130390, partial [Ciona intestinalis]
          Length = 1609

 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 92/332 (27%), Positives = 157/332 (47%), Gaps = 11/332 (3%)

Query: 115  QITTGRYHTLLISNSSV-FSCGSSLCGVLGHG--PETTQCVSFTRINFPSAAHVVQVSAS 171
            ++  G+  T +I+N+ V  SCG    G LG G   ++ +    + +       +   + S
Sbjct: 784  KVVCGQNCTFIINNNGVVLSCGEGSYGRLGQGNSDDSNRLTHISALQGFIVKQLATSTGS 843

Query: 172  ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
            + HA  + ++G+VF+ GD      GH +++R   RPR +EAL+G    QV  G   +  +
Sbjct: 844  DGHAIALTENGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALRGQEVVQVACGFKHSAVV 902

Query: 232  TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT-GNGVV 290
            TI G + T G   +G+LGHG T ++  P+ +  LE    + Q+A G ++ + V+  N  V
Sbjct: 903  TIDGKLFTFGYGDYGRLGHGSTTNKKIPERVMALENY-IIGQVACGLNHTVIVSQDNLTV 961

Query: 291  YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKG 350
            ++ G G    LG G    +  P  I+   R GI   ++S G +   AL   G ++ +G+ 
Sbjct: 962  WACGDGDYGKLGIGGTSAKTSPTKIEVLSRVGIK--KISCGAQFTAALTWDGKLFMFGQD 1019

Query: 351  YCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFP 410
                           P+ +++L SH  + +      T  L   G VY +G    G LG  
Sbjct: 1020 RMCGNCETRTSPSFNPQVVTALSSHHIIDISVGAEHTIALTSKGIVYTWGSNTDGQLGL- 1078

Query: 411  DRGVSDKVLRPRILDSLRAHHVSQISTGLYHT 442
              G ++ V  P +++SL   ++ QIS G  H+
Sbjct: 1079 --GHTNHVQEPTLVESLSGKNIRQISAGRTHS 1108



 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 87/327 (26%), Positives = 145/327 (44%), Gaps = 60/327 (18%)

Query: 204  IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 263
            +  P+L ++      ++V  G N T  +   G V +CG  ++G+LG G++ D      I+
Sbjct: 770  VLVPQLTKSFH--EARKVVCGQNCTFIINNNGVVLSCGEGSYGRLGQGNSDDSNRLTHIS 827

Query: 264  PLEEVGSVVQIAAGPS----YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFR 319
             L+  G +V+  A  +    + +A+T NG V+S+G G    LGHG    + +PR I+  R
Sbjct: 828  ALQ--GFIVKQLATSTGSDGHAIALTENGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALR 885

Query: 320  RKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQ 379
              G  VV+V+ G +H   +   G ++T+G G  G LGHG   +K +PE + +L++++  Q
Sbjct: 886  --GQEVVQVACGFKHSAVVTIDGKLFTFGYGDYGRLGHGSTTNKKIPERVMALENYIIGQ 943

Query: 380  V-CARKRKTFVLVDTGSVYGFGWMGFGSLGF----------------------------- 409
            V C       V  D  +V+  G   +G LG                              
Sbjct: 944  VACGLNHTVIVSQDNLTVWACGDGDYGKLGIGGTSAKTSPTKIEVLSRVGIKKISCGAQF 1003

Query: 410  --------------PDRGVSDKVLR------PRILDSLRAHHVSQISTGLYHTVVVTDRG 449
                           DR   +   R      P+++ +L +HH+  IS G  HT+ +T +G
Sbjct: 1004 TAALTWDGKLFMFGQDRMCGNCETRTSPSFNPQVVTALSSHHIIDISVGAEHTIALTSKG 1063

Query: 450  RLFGFGDNERAQLGHDTLRGCLEPTEI 476
             ++ +G N   QLG        EPT +
Sbjct: 1064 IVYTWGSNTDGQLGLGHTNHVQEPTLV 1090



 Score = 88.2 bits (217), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 75/246 (30%), Positives = 116/246 (47%), Gaps = 17/246 (6%)

Query: 237 VHTCGSNTHGQL---GHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
           V+  G+  HGQL   G G  +    P+      E   VV    G +    +  NGVV S 
Sbjct: 752 VYLFGAGRHGQLAEVGSGVLV----PQLTKSFHEARKVV---CGQNCTFIINNNGVVLSC 804

Query: 294 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG-DEHVVALDSSGYVYTWGKGYC 352
           G GS   LG G   D  +   I   +   +  +  S G D H +AL  +G V++WG G  
Sbjct: 805 GEGSYGRLGQGNSDDSNRLTHISALQGFIVKQLATSTGSDGHAIALTENGEVFSWGDGDY 864

Query: 353 GALGHGDEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 411
           G LGHG+   +  P  + +L+    VQV C  K    V +D G ++ FG+  +G LG   
Sbjct: 865 GKLGHGNSDRQRRPRQIEALRGQEVVQVACGFKHSAVVTID-GKLFTFGYGDYGRLGH-- 921

Query: 412 RGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT-DRGRLFGFGDNERAQLGHDTLRGC 470
              ++K +  R++ +L  + + Q++ GL HTV+V+ D   ++  GD +  +LG       
Sbjct: 922 GSTTNKKIPERVM-ALENYIIGQVACGLNHTVIVSQDNLTVWACGDGDYGKLGIGGTSAK 980

Query: 471 LEPTEI 476
             PT+I
Sbjct: 981 TSPTKI 986


>gi|119578070|gb|EAW57666.1| hCG2006901, isoform CRA_c [Homo sapiens]
          Length = 2984

 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 92/311 (29%), Positives = 151/311 (48%), Gaps = 24/311 (7%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V Q++ +E     + ++G+V+T   NS       DT      P+LV+ L      ++ A 
Sbjct: 444 VTQIACAEKRFLILSRNGRVYTQAYNS-------DT----LAPQLVQGLASRNIVKIAAH 492

Query: 225 LNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGS-VVQIAAGPS 279
            +   +L +   G V++ G    G+LGHGDT+    PK I+    ++ G  VV IA G +
Sbjct: 493 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGST 552

Query: 280 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS--AGDEHVVA 337
           Y  A+T  G +Y++G G+   LGHG   DE  P  +     KG+ V+ V+  +GD   +A
Sbjct: 553 YSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGL--KGLKVIDVACGSGDAQTLA 610

Query: 338 LDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVY 397
           +  +G V++WG G  G LG G       P+ +  L+    V+V    + +  L   G VY
Sbjct: 611 VTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVY 670

Query: 398 GFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDN 457
            +G      LG    G  + V  P++L+ L+   V  ++ G  H + +T+   +  +G N
Sbjct: 671 SWGKGDNQRLG---HGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSN 727

Query: 458 ERAQLGHDTLR 468
           ++ Q   DTLR
Sbjct: 728 DQCQ-HFDTLR 737



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 88/328 (26%), Positives = 149/328 (45%), Gaps = 26/328 (7%)

Query: 50  PQKFRSLVDLAASQLCALHSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVET 109
           P +   L +L  +Q+      +  +SRN ++    +   +     + +Q +  S +IV+ 
Sbjct: 433 PIQCEGLANLGVTQIACAEKRFLILSRNGRV--YTQAYNSDTLAPQLVQGLA-SRNIVKI 489

Query: 110 SAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSA 162
           +A     + G ++  L +   V+S G    G LGHG       P+     S  +    + 
Sbjct: 490 AAH----SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQ----AG 541

Query: 163 AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 222
            HVV ++    ++A +   G+++T G  +    GH  +      P LV  LKG+    V 
Sbjct: 542 KHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVA 600

Query: 223 AGLNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 280
            G      L +   G V + G   +G+LG G +    TPK I  L+++  VV++  G  +
Sbjct: 601 CGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL-DVVKVRCGSQF 659

Query: 281 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 340
            +A+T +G VYS+G G N  LGHG +     P+ ++    +G  V+ V+AG  H +AL  
Sbjct: 660 SIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGL--QGKKVIDVAAGSTHCLALTE 717

Query: 341 SGYVYTWGKGYCGALGHGDEIDKTLPEP 368
              V++WG        H D +  T PEP
Sbjct: 718 DSEVHSWGSN--DQCQHFDTLRVTKPEP 743



 Score = 76.3 bits (186), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 58/212 (27%), Positives = 95/212 (44%), Gaps = 19/212 (8%)

Query: 271 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 330
           V QIA      L ++ NG VY+    S          D L P+ +Q    + I  +   +
Sbjct: 444 VTQIACAEKRFLILSRNGRVYTQAYNS----------DTLAPQLVQGLASRNIVKIAAHS 493

Query: 331 GDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLA----VQVCARKRK 386
              H +AL ++G VY+WG G  G LGHGD +    P+ +S+     A    V +      
Sbjct: 494 DGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTY 553

Query: 387 TFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVV 444
           +  +   G +Y +G   +G LG    G S+    P ++  L+   V  ++  +G   T+ 
Sbjct: 554 SAAITAEGELYTWGRGNYGRLG---HGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLA 610

Query: 445 VTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 476
           VT+ G+++ +GD +  +LG     GC  P  I
Sbjct: 611 VTENGQVWSWGDGDYGKLGRGGSDGCKTPKLI 642



 Score = 53.1 bits (126), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 52/169 (30%), Positives = 76/169 (44%), Gaps = 8/169 (4%)

Query: 118 TGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
           +G   TL ++ N  V+S G    G LG G  +  C +   I       VV+V      + 
Sbjct: 603 SGDAQTLAVTENGQVWSWGDGDYGKLGRG-GSDGCKTPKLIEKLQDLDVVKVRCGSQFSI 661

Query: 177 FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
            + + GQV++ G   +   GH  T   +  P+L+E L+G     V AG      LT    
Sbjct: 662 ALTKDGQVYSWGKGDNQRLGH-GTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSE 720

Query: 237 VHTCGSNTHGQLGHGDTL--DRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
           VH+ GSN   Q  H DTL   +P P ++  L +   +V IA GP+   A
Sbjct: 721 VHSWGSNDQCQ--HFDTLRVTKPEPAALPGL-DTKHIVGIACGPAQSFA 766


>gi|355569557|gb|EHH25458.1| Putative E3 ubiquitin-protein ligase HERC6 [Macaca mulatta]
          Length = 1020

 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 89/274 (32%), Positives = 131/274 (47%), Gaps = 8/274 (2%)

Query: 193 FCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGD 252
           FC G   T+    + R  E   G    Q  +G   +  L     V +CG N+ GQLG   
Sbjct: 3   FCWG---TDSRELQRRRTERSPGAELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRR 59

Query: 253 TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGE-QHDELQ 311
                 P+ I  LE + +V  ++ G  + LAV   G V+++G+GS   LG GE +     
Sbjct: 60  APRGELPEPIQALETL-NVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFT 118

Query: 312 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEI-DKTLPEPLS 370
           P+ I T    GI +++VS G  H +AL     V++WGK   G LG G E+  +  P+ + 
Sbjct: 119 PKKITTL--NGIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEVPSQASPQRVR 176

Query: 371 SLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAH 430
           SL+     QV A    +F L   G+ +G+G    G L    R V  +  +P  + +L+  
Sbjct: 177 SLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSIGALKNL 236

Query: 431 HVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 464
            V  IS G  HT V+   G++F FGDN   QLG+
Sbjct: 237 GVIYISCGDEHTAVLIQDGKVFTFGDNSSGQLGY 270



 Score =  102 bits (255), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 88/302 (29%), Positives = 148/302 (49%), Gaps = 20/302 (6%)

Query: 163 AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 222
           A ++Q ++ E H+  +L + +V +CGDNS    G R   R    P  ++AL+ +    V+
Sbjct: 23  AELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRRAPRGEL-PEPIQALETLNVDLVS 81

Query: 223 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRP-TPKSIAPLEEVGSVVQIAAGPSYM 281
            G   +  +  +G V   G+ + GQLG G+  +   TPK I  L  +  ++Q++ G  + 
Sbjct: 82  CGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKITTLNGI-KIIQVSCGHYHS 140

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQ-HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 340
           LA++ +  V+S+G  S+  LG G++   +  P+ +++   +GI + +V+AG  H  AL  
Sbjct: 141 LALSKDSQVFSWGKNSHGQLGLGKEVPSQASPQRVRSL--EGIPLAQVAAGGAHSFALSL 198

Query: 341 SGYVYTWGKGYCGAL---GHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVY 397
            G  + WG    G L   G    +    P  + +LK+   + +      T VL+  G V+
Sbjct: 199 CGTSFGWGSNSAGQLALSGRNVPVQSNKPLSIGALKNLGVIYISCGDEHTAVLIQDGKVF 258

Query: 398 GFGWMGFGSLGF---PDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV-VTDRGRLFG 453
            FG    G LG+   P++     V R   +D L    VSQI  G YHT+  V   G++  
Sbjct: 259 TFGDNSSGQLGYSPTPEKRGPQLVER---IDGL----VSQIDCGSYHTLAYVHTTGQVIS 311

Query: 454 FG 455
           FG
Sbjct: 312 FG 313



 Score = 92.8 bits (229), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 82/299 (27%), Positives = 134/299 (44%), Gaps = 23/299 (7%)

Query: 114 MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHV 165
           +Q  +G  H+LL+ +N  V SCG +  G LG         PE  Q +    ++       
Sbjct: 26  LQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRRAPRGELPEPIQALETLNVDL------ 79

Query: 166 VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 225
             VS  + H+  V   G+VF  G  S    G  +     F P+ +  L G+   QV+ G 
Sbjct: 80  --VSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKITTLNGIKIIQVSCGH 137

Query: 226 NFTGFLTIRGHVHTCGSNTHGQLGHGDTL-DRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 284
             +  L+    V + G N+HGQLG G  +  + +P+ +  LE +  + Q+AAG ++  A+
Sbjct: 138 YHSLALSKDSQVFSWGKNSHGQLGLGKEVPSQASPQRVRSLEGI-PLAQVAAGGAHSFAL 196

Query: 285 TGNGVVYSFGSGSNFCLGHGEQHDELQ---PRAIQTFRRKGIHVVRVSAGDEHVVALDSS 341
           +  G  + +GS S   L    ++  +Q   P +I   +  G  V+ +S GDEH   L   
Sbjct: 197 SLCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSIGALKNLG--VIYISCGDEHTAVLIQD 254

Query: 342 GYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 400
           G V+T+G    G LG+    +K  P+ +  +   ++   C        +  TG V  FG
Sbjct: 255 GKVFTFGDNSSGQLGYSPTPEKRGPQLVERIDGLVSQIDCGSYHTLAYVHTTGQVISFG 313


>gi|403347403|gb|EJY73122.1| RCC1 and BTB domaincontaining protein putative [Oxytricha
           trifallax]
          Length = 685

 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 87/302 (28%), Positives = 141/302 (46%), Gaps = 17/302 (5%)

Query: 131 VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDN 190
           VF  G +  G LG G    + +  +++ F    +V Q++A   H A + ++G V T G N
Sbjct: 41  VFVFGQNSYGELGLGDVQERSIP-SQVRFFDEMNVTQIAAGNEHIAVLTRNGDVLTVGFN 99

Query: 191 SSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTA--GLNFTGFLTIRGHVHTCGSNTHGQL 248
            S   GH + N+ I  P+ +E+LK +    +++  G      ++  G ++TCG N +GQL
Sbjct: 100 GSGQLGHGN-NKSISTPKKIESLKNIRITHISSANGCENLAIISQDGKLYTCGYNNYGQL 158

Query: 249 GHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN--------GVVYSFGSGSNFC 300
           GHG   +  TP  +  L++   V  ++    + L VT +          VYS G   N  
Sbjct: 159 GHGTQSNLSTPTLVQALKDT-QVTNVSCSYYHSLIVTQDMRQASNQQTTVYSVGRNDNGQ 217

Query: 301 LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 360
           LG      E+ P+ I++   +   V++ + G  H V +   G V++ G    G LGH D 
Sbjct: 218 LGQEHTCHEITPKIIRSLNTR--QVIQTACGLHHSVFVTVHGEVFSCGFNDNGQLGHNDT 275

Query: 361 IDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLR 420
             +  P  + SLK+   VQ       T V  DTG +Y FG    G LG    G +  +++
Sbjct: 276 KSRNQPVLIESLKNKFIVQAACGYYHTLVRRDTGEIYAFGRNDKGQLGIETNGQA--LIQ 333

Query: 421 PR 422
           P+
Sbjct: 334 PK 335



 Score =  106 bits (265), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 91/305 (29%), Positives = 136/305 (44%), Gaps = 20/305 (6%)

Query: 184 VFTCGDNSSFCCGHRDTN-RPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 242
           VF  G NS    G  D   R I  P  V     +   Q+ AG      LT  G V T G 
Sbjct: 41  VFVFGQNSYGELGLGDVQERSI--PSQVRFFDEMNVTQIAAGNEHIAVLTRNGDVLTVGF 98

Query: 243 NTHGQLGHGDTLDRPTPKSIAPLEEVG-SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCL 301
           N  GQLGHG+     TPK I  L+ +  + +  A G   +  ++ +G +Y+ G  +   L
Sbjct: 99  NGSGQLGHGNNKSISTPKKIESLKNIRITHISSANGCENLAIISQDGKLYTCGYNNYGQL 158

Query: 302 GHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVV--------ALDSSGYVYTWGKGYCG 353
           GHG Q +   P  +Q    K   V  VS    H +        A +    VY+ G+   G
Sbjct: 159 GHGTQSNLSTPTLVQAL--KDTQVTNVSCSYYHSLIVTQDMRQASNQQTTVYSVGRNDNG 216

Query: 354 ALGHGDEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLGFPDR 412
            LG      +  P+ + SL +   +Q  C      FV V  G V+  G+   G LG  D 
Sbjct: 217 QLGQEHTCHEITPKIIRSLNTRQVIQTACGLHHSVFVTVH-GEVFSCGFNDNGQLGHNDT 275

Query: 413 GVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTL-RGCL 471
              ++   P +++SL+   + Q + G YHT+V  D G ++ FG N++ QLG +T  +  +
Sbjct: 276 KSRNQ---PVLIESLKNKFIVQAACGYYHTLVRRDTGEIYAFGRNDKGQLGIETNGQALI 332

Query: 472 EPTEI 476
           +P +I
Sbjct: 333 QPKQI 337



 Score = 98.6 bits (244), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 97/370 (26%), Positives = 159/370 (42%), Gaps = 37/370 (10%)

Query: 124 LLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ--- 180
           ++  +  +++CG +  G LGHG ++      T +       V  VS S  H+  V Q   
Sbjct: 140 IISQDGKLYTCGYNNYGQLGHGTQSNLSTP-TLVQALKDTQVTNVSCSYYHSLIVTQDMR 198

Query: 181 --SGQ---VFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRG 235
             S Q   V++ G N +   G   T   I  P+++ +L      Q   GL+ + F+T+ G
Sbjct: 199 QASNQQTTVYSVGRNDNGQLGQEHTCHEI-TPKIIRSLNTRQVIQTACGLHHSVFVTVHG 257

Query: 236 HVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 295
            V +CG N +GQLGH DT  R  P  I  L+    +VQ A G  + L     G +Y+FG 
Sbjct: 258 EVFSCGFNDNGQLGHNDTKSRNQPVLIESLKN-KFIVQAACGYYHTLVRRDTGEIYAFGR 316

Query: 296 GSNFCLGHGEQHDEL-QPRAIQTF------RRKGIHVVRVSAGDEH----VVALDSSGYV 344
                LG       L QP+ IQ F      +  G +  ++ +G EH      +L  SG +
Sbjct: 317 NDKGQLGIETNGQALIQPKQIQEFLTVSNIQHSGGNQNQLHSGQEHNQPSSQSLGESGAI 376

Query: 345 YTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGF 404
                     L   + ++   P+     K     ++      +  L ++G ++ FG    
Sbjct: 377 MQ-------GLAESNNLNNQQPQVQYLSKKVNISKIACGCYHSIALCESGQLFTFGRGNH 429

Query: 405 GSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 464
           G LG   +G ++    P+ + SL    V  I+ G YHT+V+  + ++ G      +QL  
Sbjct: 430 GQLG---QGNTEDQKLPKQVASLHDKKVIGIAGGFYHTIVLVKQKKVKGI-----SQLST 481

Query: 465 DTLRGCLEPT 474
           D  +   EP+
Sbjct: 482 DMKKIINEPS 491


>gi|21537357|gb|AAM61698.1| UVB-resistance protein-like [Arabidopsis thaliana]
          Length = 396

 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 99/365 (27%), Positives = 163/365 (44%), Gaps = 26/365 (7%)

Query: 125 LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQV 184
           + S +SV + GS   G LG G +  + ++ + ++     +V  V     ++  +   G++
Sbjct: 1   MASATSVIAWGSGEDGQLGLGTDEEKELA-SVVDALEPFNVRSVVGGSRNSLAICDDGKL 59

Query: 185 FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNT 244
           FT G N     GH    +    P LV++L  V   Q   G      +  +G  +  G N 
Sbjct: 60  FTWGWNQRGTLGHPPETKTESTPSLVKSLANVKIVQAAIGAWHCLAVDDQGRAYAWGGNE 119

Query: 245 HGQLGHGDTLD---RPTPKSIAPLEEVG---SVVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
           +GQ G   + D   RP  + I   +      +V Q+AAG ++ + +T  G V+++G    
Sbjct: 120 YGQCGEEPSKDETGRPVRRDIVIPKRCAQQLTVRQVAAGGTHSVVLTREGYVWTWGQ--- 176

Query: 299 FCLGHGEQHDELQPRAIQTF----RRKGIHVVR-VSAGDEHVVALDSSGYVYTWGKGYCG 353
                        P  I+      R +G+  VR ++ G  H +AL   G ++ WG    G
Sbjct: 177 ----------PWPPGDIKQISVPVRVQGLENVRLIAVGAFHNLALKEDGTLWAWGNNEYG 226

Query: 354 ALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRG 413
            LG GD   ++ P P+  L     V + A    +  L + G VYG+G    G LGF D  
Sbjct: 227 QLGTGDTQPRSYPIPVQGLDDLTLVDIAAGGWHSTALTNEGEVYGWGRGEHGRLGFGDND 286

Query: 414 VSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEP 473
            S K+L P+ ++ L    + Q+S G  H+V +T  GR+F FG  +  +LG+       +P
Sbjct: 287 KSSKML-PQKVNLLPGEDIIQVSCGGTHSVALTRDGRIFSFGRGDHGRLGYGRKVTTGQP 345

Query: 474 TEIFI 478
            E+ I
Sbjct: 346 LELPI 350


>gi|345857538|ref|ZP_08809972.1| cell wall binding repeat 2 family protein [Desulfosporosinus sp.
           OT]
 gi|344329366|gb|EGW40710.1| cell wall binding repeat 2 family protein [Desulfosporosinus sp.
           OT]
          Length = 732

 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 108/360 (30%), Positives = 172/360 (47%), Gaps = 22/360 (6%)

Query: 110 SAGNMQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQV 168
           +A + Q+  G    L + +  +V++ G +  G LG G   T  V+ T I      +V+ V
Sbjct: 43  AAASSQLAAGANFGLAVDAQGNVWAWGDNSEGQLGQGVADTNPVA-TPIQVKDLTNVISV 101

Query: 169 SASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFT 228
           SA   HA  +   G V+  G+N +   G  D   PI  PR VE L+ +    + AGL F+
Sbjct: 102 SAGGVHALALKADGTVWAWGNNETDQLG-VDQASPIAIPRQVEGLQNIVA--IAAGLEFS 158

Query: 229 GFLTIRGHVHTCGSNTHGQLGH-GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN 287
             L+  G V   G+N + Q+ +  D +   TP+ +     +  VV+IAAG ++ LA+  +
Sbjct: 159 LALSSDGKVWAWGANEYKQINYFSDAIKIATPQIV---NNLSGVVKIAAGSAWCLALKND 215

Query: 288 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGI-HVVRVSAGDEHVVALDSSGYVYT 346
           G V+++G+     +G+ +Q  E+        +  GI  V+ VSAG  H +AL   G V+ 
Sbjct: 216 GTVWTWGA-QKVPMGNDDQDGEVT-NITNLTQINGISDVISVSAGYSHSLALKGDGTVWG 273

Query: 347 WGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGS 406
           WG      LG  D+     P  +S LK+     V A    T  L + G+V+  G   +G 
Sbjct: 274 WGSNELLQLGSHDQQWFDSPVQISPLKN--VTTVSAGAYLTMALTNDGTVWTLGGNIYGQ 331

Query: 407 LGFPDRGVSDKVLRPRILDSLRAHHVSQ---ISTGLYHTVVVTDRGRLFGFGDNERAQLG 463
           LG    G+    L P     ++A +++Q   IS G Y   +    G ++G+GDN + QLG
Sbjct: 332 LG---NGIKADSL-PITAYPVKASNITQATSISAG-YGFALGRALGSVWGWGDNSKGQLG 386



 Score = 84.7 bits (208), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 68/268 (25%), Positives = 124/268 (46%), Gaps = 12/268 (4%)

Query: 211 EALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS 270
           +A       Q+ AG NF   +  +G+V   G N+ GQLG G     P    I  ++++ +
Sbjct: 39  DARPAAASSQLAAGANFGLAVDAQGNVWAWGDNSEGQLGQGVADTNPVATPIQ-VKDLTN 97

Query: 271 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 330
           V+ ++AG  + LA+  +G V+++G+     LG  +      PR ++  +    ++V ++A
Sbjct: 98  VISVSAGGVHALALKADGTVWAWGNNETDQLGVDQASPIAIPRQVEGLQ----NIVAIAA 153

Query: 331 GDEHVVALDSSGYVYTWGKGYCGALGH-GDEIDKTLPEPLSSLKSHLAVQVCARKRKTFV 389
           G E  +AL S G V+ WG      + +  D I    P+ +++L     V++ A       
Sbjct: 154 GLEFSLALSSDGKVWAWGANEYKQINYFSDAIKIATPQIVNNLSG--VVKIAAGSAWCLA 211

Query: 390 LVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRA-HHVSQISTGLYHTVVVTDR 448
           L + G+V+ +G      +G  D+    +V     L  +     V  +S G  H++ +   
Sbjct: 212 LKNDGTVWTWGAQKV-PMGNDDQ--DGEVTNITNLTQINGISDVISVSAGYSHSLALKGD 268

Query: 449 GRLFGFGDNERAQLGHDTLRGCLEPTEI 476
           G ++G+G NE  QLG    +    P +I
Sbjct: 269 GTVWGWGSNELLQLGSHDQQWFDSPVQI 296



 Score = 81.6 bits (200), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 87/309 (28%), Positives = 145/309 (46%), Gaps = 23/309 (7%)

Query: 162 AAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGH--RDTNRPIFRPRLVEALKGVPCK 219
           AA   Q++A  N    V   G V+  GDNS    G    DTN P+  P  V+ L  V   
Sbjct: 43  AAASSQLAAGANFGLAVDAQGNVWAWGDNSEGQLGQGVADTN-PVATPIQVKDLTNV--I 99

Query: 220 QVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGP 278
            V+AG      L   G V   G+N   QLG    +D+ +P +I   +E + ++V IAAG 
Sbjct: 100 SVSAGGVHALALKADGTVWAWGNNETDQLG----VDQASPIAIPRQVEGLQNIVAIAAGL 155

Query: 279 SYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQ-PRAIQTFRRKGIHVVRVSAGDEHVVA 337
            + LA++ +G V+++G+     + +     ++  P+ +         VV+++AG    +A
Sbjct: 156 EFSLALSSDGKVWAWGANEYKQINYFSDAIKIATPQIVNNLS----GVVKIAAGSAWCLA 211

Query: 338 LDSSGYVYTWGKGYCGALGHGDEI-DKTLPEPLSSLKS-HLAVQVCARKRKTFVLVDTGS 395
           L + G V+TWG      +G+ D+  + T    L+ +      + V A    +  L   G+
Sbjct: 212 LKNDGTVWTWGAQKV-PMGNDDQDGEVTNITNLTQINGISDVISVSAGYSHSLALKGDGT 270

Query: 396 VYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFG 455
           V+G+G      LG  D+   D    P  +  L+  +V+ +S G Y T+ +T+ G ++  G
Sbjct: 271 VWGWGSNELLQLGSHDQQWFDS---PVQISPLK--NVTTVSAGAYLTMALTNDGTVWTLG 325

Query: 456 DNERAQLGH 464
            N   QLG+
Sbjct: 326 GNIYGQLGN 334


>gi|7939537|dbj|BAA95740.1| chromosome condensation regulator-like protein protein [Arabidopsis
           thaliana]
          Length = 1067

 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 97/323 (30%), Positives = 144/323 (44%), Gaps = 20/323 (6%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V Q+     H A V + G+VFT G+      GH      I RP+LVE L       V  G
Sbjct: 262 VHQIVCGVRHVALVTRQGEVFTWGEEVGGRLGH-GIQVDISRPKLVEFLALTNIDFVACG 320

Query: 225 LNFTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSYM 281
              T  ++  G + + G   H  G LGHG  +    PK ++ PLE +  V+ +A G  + 
Sbjct: 321 EYHTCVVSTSGDLFSWGDGIHNVGLLGHGSDISHWIPKRVSGPLEGL-QVLSVACGTWHS 379

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL--- 338
              T NG +++FG G+   LGHG +     P+ +Q+    G+  V+V+    H  A+   
Sbjct: 380 ALATANGKLFTFGDGAFGVLGHGNRESVSYPKEVQSL--NGLKTVKVACSIWHTAAIVEV 437

Query: 339 -------DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 391
                   SS  ++TWG G    LGHG++    LP  +SSL  +   ++      T  L 
Sbjct: 438 MGQTATSMSSRKLFTWGDGDKNRLGHGNKETYLLPTCVSSLIDYNFHKIACGHTFTVALT 497

Query: 392 DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRL 451
            +G V+  G    G LG     +SD  L   + D L    V +I+ G +H  V+T R  +
Sbjct: 498 TSGHVFTMGGTAHGQLG---NSISDGKLPCLVQDRLVGEFVEEIACGAHHVAVLTSRSEV 554

Query: 452 FGFGDNERAQLGHDTLRGCLEPT 474
           F +G     +LGH        PT
Sbjct: 555 FTWGKGANGRLGHGDTEDKRTPT 577



 Score = 92.4 bits (228), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 79/272 (29%), Positives = 133/272 (48%), Gaps = 19/272 (6%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSL--CGVLGHGPETTQCVSFTRINFP-SAAHVVQVSAS 171
           +  G YHT ++S S  +FS G  +   G+LGHG + +  +   R++ P     V+ V+  
Sbjct: 317 VACGEYHTCVVSTSGDLFSWGDGIHNVGLLGHGSDISHWIP-KRVSGPLEGLQVLSVACG 375

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG-F 230
             H+A    +G++FT GD +    GH +    +  P+ V++L G+   +V   +  T   
Sbjct: 376 TWHSALATANGKLFTFGDGAFGVLGHGN-RESVSYPKEVQSLNGLKTVKVACSIWHTAAI 434

Query: 231 LTIRGH---------VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 281
           + + G          + T G     +LGHG+      P  ++ L +  +  +IA G ++ 
Sbjct: 435 VEVMGQTATSMSSRKLFTWGDGDKNRLGHGNKETYLLPTCVSSLIDY-NFHKIACGHTFT 493

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 341
           +A+T +G V++ G  ++  LG+     +L P  +Q  R  G  V  ++ G  HV  L S 
Sbjct: 494 VALTTSGHVFTMGGTAHGQLGNSISDGKL-PCLVQD-RLVGEFVEEIACGAHHVAVLTSR 551

Query: 342 GYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
             V+TWGKG  G LGHGD  DK  P  + +L+
Sbjct: 552 SEVFTWGKGANGRLGHGDTEDKRTPTLVEALR 583



 Score = 86.3 bits (212), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 79/300 (26%), Positives = 132/300 (44%), Gaps = 13/300 (4%)

Query: 182 GQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCG 241
           G+V+T G        +      +  PR +E+   +   Q+  G+     +T +G V T G
Sbjct: 226 GEVWTEGILPDGTASNETVKTDVLTPRPLESNVVLDVHQIVCGVRHVALVTRQGEVFTWG 285

Query: 242 SNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC- 300
               G+LGHG  +D   PK +  L  + ++  +A G  +   V+ +G ++S+G G +   
Sbjct: 286 EEVGGRLGHGIQVDISRPKLVEFLA-LTNIDFVACGEYHTCVVSTSGDLFSWGDGIHNVG 344

Query: 301 -LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGD 359
            LGHG       P+ + +   +G+ V+ V+ G  H     ++G ++T+G G  G LGHG+
Sbjct: 345 LLGHGSDISHWIPKRV-SGPLEGLQVLSVACGTWHSALATANGKLFTFGDGAFGVLGHGN 403

Query: 360 EIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDT--------GSVYGFGWMGFGSLGFPD 411
               + P+ + SL     V+V      T  +V+          S   F W G G      
Sbjct: 404 RESVSYPKEVQSLNGLKTVKVACSIWHTAAIVEVMGQTATSMSSRKLFTW-GDGDKNRLG 462

Query: 412 RGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCL 471
            G  +  L P  + SL  ++  +I+ G   TV +T  G +F  G     QLG+    G L
Sbjct: 463 HGNKETYLLPTCVSSLIDYNFHKIACGHTFTVALTTSGHVFTMGGTAHGQLGNSISDGKL 522



 Score = 80.1 bits (196), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 90/345 (26%), Positives = 141/345 (40%), Gaps = 36/345 (10%)

Query: 115 QITTGRYHTLLISNS-SVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHVV 166
           QI  G  H  L++    VF+ G  + G LGHG       P+  + ++ T I+F       
Sbjct: 264 QIVCGVRHVALVTRQGEVFTWGEEVGGRLGHGIQVDISRPKLVEFLALTNIDF------- 316

Query: 167 QVSASENHAAFVLQSGQVFTCGD--NSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
            V+  E H   V  SG +F+ GD  ++    GH          R+   L+G+    V  G
Sbjct: 317 -VACGEYHTCVVSTSGDLFSWGDGIHNVGLLGHGSDISHWIPKRVSGPLEGLQVLSVACG 375

Query: 225 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 284
              +   T  G + T G    G LGHG+      PK +  L  +   V++A    +  A+
Sbjct: 376 TWHSALATANGKLFTFGDGAFGVLGHGNRESVSYPKEVQSLNGL-KTVKVACSIWHTAAI 434

Query: 285 T----------GNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEH 334
                       +  ++++G G    LGHG +   L P  + +      H  +++ G   
Sbjct: 435 VEVMGQTATSMSSRKLFTWGDGDKNRLGHGNKETYLLPTCVSSLIDYNFH--KIACGHTF 492

Query: 335 VVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSS-LKSHLAVQVCARKRKTFVLVDT 393
            VAL +SG+V+T G    G LG+    D  LP  +   L      ++        VL   
Sbjct: 493 TVALTTSGHVFTMGGTAHGQLGNSIS-DGKLPCLVQDRLVGEFVEEIACGAHHVAVLTSR 551

Query: 394 GSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTG 438
             V+ +G    G LG  D    DK   P ++++LR  HV  +S G
Sbjct: 552 SEVFTWGKGANGRLGHGD--TEDKRT-PTLVEALRDRHVKSLSCG 593



 Score = 77.4 bits (189), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 72/250 (28%), Positives = 115/250 (46%), Gaps = 24/250 (9%)

Query: 114 MQITTGRYHTLL-ISNSSVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSAS 171
           + +  G +H+ L  +N  +F+ G    GVLGHG    + VS+ + +   +    V+V+ S
Sbjct: 370 LSVACGTWHSALATANGKLFTFGDGAFGVLGHG--NRESVSYPKEVQSLNGLKTVKVACS 427

Query: 172 ENHAAFVLQ----------SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQV 221
             H A +++          S ++FT GD      GH +    +  P  V +L      ++
Sbjct: 428 IWHTAAIVEVMGQTATSMSSRKLFTWGDGDKNRLGHGNKETYLL-PTCVSSLIDYNFHKI 486

Query: 222 TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ-IAAGPSY 280
             G  FT  LT  GHV T G   HGQLG+  + D   P  +     VG  V+ IA G  +
Sbjct: 487 ACGHTFTVALTTSGHVFTMGGTAHGQLGNSIS-DGKLP-CLVQDRLVGEFVEEIACGAHH 544

Query: 281 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 340
           +  +T    V+++G G+N  LGHG+  D+  P  ++  R +  HV  +S G        S
Sbjct: 545 VAVLTSRSEVFTWGKGANGRLGHGDTEDKRTPTLVEALRDR--HVKSLSCGSN----FTS 598

Query: 341 SGYVYTWGKG 350
           S  ++ W  G
Sbjct: 599 SICIHKWVSG 608



 Score = 45.8 bits (107), Expect = 0.056,   Method: Compositional matrix adjust.
 Identities = 53/184 (28%), Positives = 81/184 (44%), Gaps = 27/184 (14%)

Query: 92  RVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETT-- 149
           + ++   S+ H++ IVE      Q  T       +S+  +F+ G      LGHG + T  
Sbjct: 420 KTVKVACSIWHTAAIVEVMG---QTATS------MSSRKLFTWGDGDKNRLGHGNKETYL 470

Query: 150 --QCVS-FTRINFPSAA--HVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPI 204
              CVS     NF   A  H   V+        +  SG VFT G  +    G+  ++  +
Sbjct: 471 LPTCVSSLIDYNFHKIACGHTFTVA--------LTTSGHVFTMGGTAHGQLGNSISDGKL 522

Query: 205 FRPRLVE-ALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 263
             P LV+  L G   +++  G +    LT R  V T G   +G+LGHGDT D+ TP  + 
Sbjct: 523 --PCLVQDRLVGEFVEEIACGAHHVAVLTSRSEVFTWGKGANGRLGHGDTEDKRTPTLVE 580

Query: 264 PLEE 267
            L +
Sbjct: 581 ALRD 584


>gi|392347372|ref|XP_342701.4| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 [Rattus
           norvegicus]
          Length = 1185

 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 80/266 (30%), Positives = 130/266 (48%), Gaps = 5/266 (1%)

Query: 206 RPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL 265
           +PR +EA  G+   +  +G   +  L     V++CG N+ GQLG         P+ I  L
Sbjct: 169 QPRRLEAGTGLKLLKAASGERHSLLLFSNHRVYSCGDNSRGQLGQKSPQSTKRPEPIQAL 228

Query: 266 EEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHD-ELQPRAIQTFRRKGIH 324
             V  +  ++ G  + +AV   G V+++G+GS   LG GE  +    P  I +    GI 
Sbjct: 229 STV-HIDLVSCGKEHSVAVCHQGRVFTWGAGSEGQLGIGESKEISFMPTKINSL--AGIK 285

Query: 325 VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEI-DKTLPEPLSSLKSHLAVQVCAR 383
           +++VS G  H +AL   G V++WG    G LG G+ +  +  P+ + SL+     QV A 
Sbjct: 286 IIQVSCGHYHSLALSEDGQVFSWGSNRQGQLGLGNNLCSQASPQKVKSLEGIPLAQVAAG 345

Query: 384 KRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV 443
              +F L   G+ +G+G    G L        +++ +P  + +L+  +V  IS G  HT 
Sbjct: 346 GTHSFALSLMGTSFGWGNNRSGQLALSGNSAKEQIYKPHSIGALKTLNVVYISCGYEHTS 405

Query: 444 VVTDRGRLFGFGDNERAQLGHDTLRG 469
           V+T+ G++F FG +   QL H    G
Sbjct: 406 VLTEDGQVFTFGGSSSEQLQHSPRSG 431



 Score = 99.4 bits (246), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 84/293 (28%), Positives = 137/293 (46%), Gaps = 11/293 (3%)

Query: 114 MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGH-GPETTQCVSFTRINFPSAAHVVQVSAS 171
           ++  +G  H+LL+ SN  V+SCG +  G LG   P++T+      I   S  H+  VS  
Sbjct: 182 LKAASGERHSLLLFSNHRVYSCGDNSRGQLGQKSPQSTK--RPEPIQALSTVHIDLVSCG 239

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
           + H+  V   G+VFT G  S    G  ++    F P  + +L G+   QV+ G   +  L
Sbjct: 240 KEHSVAVCHQGRVFTWGAGSEGQLGIGESKEISFMPTKINSLAGIKIIQVSCGHYHSLAL 299

Query: 232 TIRGHVHTCGSNTHGQLGHGDTL-DRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 290
           +  G V + GSN  GQLG G+ L  + +P+ +  LE +  + Q+AAG ++  A++  G  
Sbjct: 300 SEDGQVFSWGSNRQGQLGLGNNLCSQASPQKVKSLEGI-PLAQVAAGGTHSFALSLMGTS 358

Query: 291 YSFG---SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 347
           + +G   SG     G+  +    +P +I     K ++VV +S G EH   L   G V+T+
Sbjct: 359 FGWGNNRSGQLALSGNSAKEQIYKPHSIGAL--KTLNVVYISCGYEHTSVLTEDGQVFTF 416

Query: 348 GKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 400
           G      L H     +  P+ +  +  H++   C        +  TG V   G
Sbjct: 417 GGSSSEQLQHSPRSGRGGPQLIEGIGGHVSQIECGSYHTIAYVYTTGQVVSLG 469



 Score = 92.4 bits (228), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 82/306 (26%), Positives = 146/306 (47%), Gaps = 14/306 (4%)

Query: 156 RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 215
           R+   +   +++ ++ E H+  +  + +V++CGDNS    G + + +   RP  ++AL  
Sbjct: 172 RLEAGTGLKLLKAASGERHSLLLFSNHRVYSCGDNSRGQLGQK-SPQSTKRPEPIQALST 230

Query: 216 VPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRP-TPKSIAPLEEVGSVVQI 274
           V    V+ G   +  +  +G V T G+ + GQLG G++ +    P  I  L  +  ++Q+
Sbjct: 231 VHIDLVSCGKEHSVAVCHQGRVFTWGAGSEGQLGIGESKEISFMPTKINSLAGI-KIIQV 289

Query: 275 AAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH-DELQPRAIQTFRRKGIHVVRVSAGDE 333
           + G  + LA++ +G V+S+GS     LG G     +  P+ +++   +GI + +V+AG  
Sbjct: 290 SCGHYHSLALSEDGQVFSWGSNRQGQLGLGNNLCSQASPQKVKSL--EGIPLAQVAAGGT 347

Query: 334 HVVALDSSGYVYTWGKGYCGAL---GHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVL 390
           H  AL   G  + WG    G L   G+  +     P  + +LK+   V +      T VL
Sbjct: 348 HSFALSLMGTSFGWGNNRSGQLALSGNSAKEQIYKPHSIGALKTLNVVYISCGYEHTSVL 407

Query: 391 VDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV-VTDRG 449
            + G V+ FG      L    R        P++++ +   HVSQI  G YHT+  V   G
Sbjct: 408 TEDGQVFTFGGSSSEQLQHSPRSGRGG---PQLIEGI-GGHVSQIECGSYHTIAYVYTTG 463

Query: 450 RLFGFG 455
           ++   G
Sbjct: 464 QVVSLG 469



 Score = 55.5 bits (132), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 51/187 (27%), Positives = 77/187 (41%), Gaps = 21/187 (11%)

Query: 114 MQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +Q++ G YH+L +S +  VFS GS+  G LG G       S  ++       + QV+A  
Sbjct: 287 IQVSCGHYHSLALSEDGQVFSWGSNRQGQLGLGNNLCSQASPQKVKSLEGIPLAQVAAGG 346

Query: 173 NHAAFVLQSGQVFTCGDNSS--FCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
            H+  +   G  F  G+N S             I++P  + ALK +    ++ G   T  
Sbjct: 347 THSFALSLMGTSFGWGNNRSGQLALSGNSAKEQIYKPHSIGALKTLNVVYISCGYEHTSV 406

Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPK------------------SIAPLEEVGSVV 272
           LT  G V T G ++  QL H     R  P+                  +IA +   G VV
Sbjct: 407 LTEDGQVFTFGGSSSEQLQHSPRSGRGGPQLIEGIGGHVSQIECGSYHTIAYVYTTGQVV 466

Query: 273 QIAAGPS 279
            +  GPS
Sbjct: 467 SLGRGPS 473


>gi|357520085|ref|XP_003630331.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
 gi|355524353|gb|AET04807.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
          Length = 371

 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 71/241 (29%), Positives = 122/241 (50%), Gaps = 8/241 (3%)

Query: 237 VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV-VYSFGS 295
           V + G    GQLGHGDT DR  P  ++  +    +V +  G  Y +A + +G  VYS+G 
Sbjct: 125 VCSWGRGEDGQLGHGDTDDRLLPTKLSAFDGQ-DIVSVTCGADYTVARSKSGKDVYSWGW 183

Query: 296 GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGAL 355
           G    LGHG+  D   P  I+    +G+ + ++S GD H +A+     V +WG+   G L
Sbjct: 184 GDFGRLGHGDPSDLFIPHPIRAL--QGLRIKQISCGDCHCLAVTMENKVLSWGRNQNGEL 241

Query: 356 GHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVS 415
           G G   D  +P+ + + +      V A    +  + + G +YG+GW  +G+LG  D   +
Sbjct: 242 GLGTTKDSHVPQKILAFEGIRIKMVAAGAEHSVAITEDGDLYGWGWGRYGNLGLGD--TN 299

Query: 416 DKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTE 475
           D+++  ++  ++    +  +S G  HT+ ++  G L+  G ++  QLGH     CL P +
Sbjct: 300 DRLIPEKV--NIDGDKIVMVSCGWRHTISISSSGGLYTHGWSKYGQLGHGDFEDCLVPRK 357

Query: 476 I 476
           +
Sbjct: 358 V 358



 Score =  105 bits (263), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 82/283 (28%), Positives = 141/283 (49%), Gaps = 9/283 (3%)

Query: 101 EHSSDIVETSAGNMQITTGRYHTLL--ISNSSVFSCGSSLCGVLGHGPETTQCVSFTRIN 158
           +   + V+  +G + + +  ++++   +S + V S G    G LGHG +T   +  T+++
Sbjct: 93  KEEEEPVKVHSGMLNLFSSLFNSIQNQVSGNVVCSWGRGEDGQLGHG-DTDDRLLPTKLS 151

Query: 159 FPSAAHVVQVSASENHAAFVLQSGQ-VFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVP 217
                 +V V+   ++     +SG+ V++ G       GH D +  +F P  + AL+G+ 
Sbjct: 152 AFDGQDIVSVTCGADYTVARSKSGKDVYSWGWGDFGRLGHGDPS-DLFIPHPIRALQGLR 210

Query: 218 CKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAG 277
            KQ++ G      +T+   V + G N +G+LG G T D   P+ I   E +  +  +AAG
Sbjct: 211 IKQISCGDCHCLAVTMENKVLSWGRNQNGELGLGTTKDSHVPQKILAFEGI-RIKMVAAG 269

Query: 278 PSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
             + +A+T +G +Y +G G    LG G+ +D L P  +      G  +V VS G  H ++
Sbjct: 270 AEHSVAITEDGDLYGWGWGRYGNLGLGDTNDRLIPEKVNI---DGDKIVMVSCGWRHTIS 326

Query: 338 LDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQV 380
           + SSG +YT G    G LGHGD  D  +P  + +L   L  QV
Sbjct: 327 ISSSGGLYTHGWSKYGQLGHGDFEDCLVPRKVQALSDKLISQV 369



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 83/302 (27%), Positives = 131/302 (43%), Gaps = 37/302 (12%)

Query: 204 IFRPRLVEALKGVPCKQVTA-GLNFTGFLTIR-GHVHTCGSNTHGQLGHGDTLDRPTPKS 261
           I  P L E+ +   C +V A  +NF  F+  R G+V     +     G G     P+ ++
Sbjct: 20  ISTPLLPESWR--LCSKVNASAVNFRSFVVERVGNVVYVAFSGFQMAGGGSD---PSWRT 74

Query: 262 IAPLEEVGSV--------------VQIAAGPSYMLA---------VTGNGVVYSFGSGSN 298
           + PLE +G V              V++ +G   + +         V+GN VV S+G G +
Sbjct: 75  LEPLESIGGVPLFSTRRNKEEEEPVKVHSGMLNLFSSLFNSIQNQVSGN-VVCSWGRGED 133

Query: 299 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY-VYTWGKGYCGALGH 357
             LGHG+  D L P  +  F   G  +V V+ G ++ VA   SG  VY+WG G  G LGH
Sbjct: 134 GQLGHGDTDDRLLPTKLSAF--DGQDIVSVTCGADYTVARSKSGKDVYSWGWGDFGRLGH 191

Query: 358 GDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDK 417
           GD  D  +P P+ +L+     Q+         +     V  +G    G LG    G +  
Sbjct: 192 GDPSDLFIPHPIRALQGLRIKQISCGDCHCLAVTMENKVLSWGRNQNGELGL---GTTKD 248

Query: 418 VLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF 477
              P+ + +     +  ++ G  H+V +T+ G L+G+G      LG       L P ++ 
Sbjct: 249 SHVPQKILAFEGIRIKMVAAGAEHSVAITEDGDLYGWGWGRYGNLGLGDTNDRLIPEKVN 308

Query: 478 IQ 479
           I 
Sbjct: 309 ID 310



 Score = 70.1 bits (170), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 46/142 (32%), Positives = 65/142 (45%), Gaps = 4/142 (2%)

Query: 340 SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGS-VYG 398
           S   V +WG+G  G LGHGD  D+ LP  LS+      V V      T     +G  VY 
Sbjct: 121 SGNVVCSWGRGEDGQLGHGDTDDRLLPTKLSAFDGQDIVSVTCGADYTVARSKSGKDVYS 180

Query: 399 FGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNE 458
           +GW  FG LG  D      +  P  + +L+   + QIS G  H + VT   ++  +G N+
Sbjct: 181 WGWGDFGRLGHGD---PSDLFIPHPIRALQGLRIKQISCGDCHCLAVTMENKVLSWGRNQ 237

Query: 459 RAQLGHDTLRGCLEPTEIFIQE 480
             +LG  T +    P +I   E
Sbjct: 238 NGELGLGTTKDSHVPQKILAFE 259


>gi|348676014|gb|EGZ15832.1| hypothetical protein PHYSODRAFT_315997 [Phytophthora sojae]
          Length = 614

 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 112/363 (30%), Positives = 167/363 (46%), Gaps = 34/363 (9%)

Query: 131 VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAH---VVQVSASENHAAFVLQSGQVFTC 187
           V+S G +  G L  G +TT   +  R++  ++ H   VV V+      A + + G V+TC
Sbjct: 33  VYSFGQNTYGELALG-DTTDRSAPIRVDLGNSNHGRRVVDVACGNEQTAILFEDGDVYTC 91

Query: 188 GDNSSFCCGHRDTNR-PIFR-------PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 239
           G N S  C    T R P  R        R V    G   + + A       L   G+++T
Sbjct: 92  GYNDSGQCAIGTTERVPTLRFSPGLSSNRTVRIFSGNGSEHLAA-------LHANGNLYT 144

Query: 240 CGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM--LAVTGNGVVYSFGSGS 297
            G N  GQLG G +    T      +EE+        G SY     V  NG +Y+ G   
Sbjct: 145 VGFNMRGQLGLGSS---TTVMEATLVEELAGKRVADVGCSYFHTAIVMDNGDLYACGCND 201

Query: 298 NFCLGHGEQHD-ELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 356
              LG G+  + EL PR ++ F R+   V+ V+ G  + +A    G V  +GK   G LG
Sbjct: 202 YGQLGLGDHRNGELVPRPVEYFFRR--PVLAVACGQHYTIASLRDGGVVAFGKNDHGQLG 259

Query: 357 HGDEIDKTLPEP--LSSLKSHLAV-QVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRG 413
             D   + + +P  L++    L V Q+      T V+ + G+VY FG   +G LG    G
Sbjct: 260 L-DSTSEPVSQPTRLAAPLDRLVVPQLSCGYHHTAVVTEDGAVYTFGRNDYGQLGL---G 315

Query: 414 VSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEP 473
               + RP  ++SL    ++Q++ G YHT+V++D G++F FG N   QLG +T   CL P
Sbjct: 316 HKMHMARPARVESLARMRITQVACGCYHTLVLSDDGKVFPFGRNNHGQLGLETSVDCLSP 375

Query: 474 TEI 476
             I
Sbjct: 376 QLI 378



 Score = 95.9 bits (237), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 98/357 (27%), Positives = 157/357 (43%), Gaps = 25/357 (7%)

Query: 97  LQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTR 156
           L +  H   +V+ + GN Q        +L  +  V++CG +  G    G  TT+ V   R
Sbjct: 60  LGNSNHGRRVVDVACGNEQTA------ILFEDGDVYTCGYNDSGQCAIG--TTERVPTLR 111

Query: 157 INFP--SAAHVVQVSASE--NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEA 212
            + P  S+   V++ +     H A +  +G ++T G N     G   ++  +    LVE 
Sbjct: 112 FS-PGLSSNRTVRIFSGNGSEHLAALHANGNLYTVGFNMRGQLG-LGSSTTVMEATLVEE 169

Query: 213 LKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLD-RPTPKSIAPLEEV--G 269
           L G     V      T  +   G ++ CG N +GQLG GD  +    P+   P+E     
Sbjct: 170 LAGKRVADVGCSYFHTAIVMDNGDLYACGCNDYGQLGLGDHRNGELVPR---PVEYFFRR 226

Query: 270 SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDEL-QPRAIQTFRRKGIHVVRV 328
            V+ +A G  Y +A   +G V +FG   +  LG     + + QP  +     + + V ++
Sbjct: 227 PVLAVACGQHYTIASLRDGGVVAFGKNDHGQLGLDSTSEPVSQPTRLAAPLDRLV-VPQL 285

Query: 329 SAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTF 388
           S G  H   +   G VYT+G+   G LG G ++    P  + SL      QV      T 
Sbjct: 286 SCGYHHTAVVTEDGAVYTFGRNDYGQLGLGHKMHMARPARVESLARMRITQVACGCYHTL 345

Query: 389 VLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVV 445
           VL D G V+ FG    G LG      S   L P+++ +LR   V++++ G YH+V +
Sbjct: 346 VLSDDGKVFPFGRNNHGQLGLE---TSVDCLSPQLISTLRNKTVTKVAAGFYHSVCL 399



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 52/177 (29%), Positives = 84/177 (47%), Gaps = 8/177 (4%)

Query: 114 MQITTGRYHTLL-ISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVV-QVSAS 171
           + +  G+++T+  + +  V + G +  G LG    +      TR+  P    VV Q+S  
Sbjct: 229 LAVACGQHYTIASLRDGGVVAFGKNDHGQLGLDSTSEPVSQPTRLAAPLDRLVVPQLSCG 288

Query: 172 ENHAAFVLQSGQVFTCGDNS--SFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
            +H A V + G V+T G N       GH+     + RP  VE+L  +   QV  G   T 
Sbjct: 289 YHHTAVVTEDGAVYTFGRNDYGQLGLGHK---MHMARPARVESLARMRITQVACGCYHTL 345

Query: 230 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTG 286
            L+  G V   G N HGQLG   ++D  +P+ I+ L    +V ++AAG  + + + G
Sbjct: 346 VLSDDGKVFPFGRNNHGQLGLETSVDCLSPQLISTLRN-KTVTKVAAGFYHSVCLVG 401


>gi|357470133|ref|XP_003605351.1| Serine/threonine protein kinase Nek9 [Medicago truncatula]
 gi|355506406|gb|AES87548.1| Serine/threonine protein kinase Nek9 [Medicago truncatula]
          Length = 1096

 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 94/316 (29%), Positives = 139/316 (43%), Gaps = 18/316 (5%)

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
           H A V + G+VFT G+ S    GH   ++   +P LVE    V    V  G   T  ++ 
Sbjct: 102 HLAIVSREGKVFTWGEESGGRLGH-GIDKDFGKPHLVEFPDVVTLDIVACGEFHTSAVSK 160

Query: 234 RGHVHTCGSNTH--GQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
             +  T G  TH  G LGHG+ +    PKS+    +   VV +A G  +    T NG ++
Sbjct: 161 CDNFFTWGDGTHNVGLLGHGNEISHWIPKSVNGFLDGLRVVSVACGSWHSALATSNGKLF 220

Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL----------DSS 341
           +FG G+   LGHG+Q   + P+ +Q     G+  V+V+ G  H  A+           SS
Sbjct: 221 TFGDGTFGVLGHGDQESVMYPKEVQLL--SGLKTVKVACGVWHTAAIIEVAFQSGSNASS 278

Query: 342 GYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGW 401
             ++TWG G    LGHG++     P  +S L  +   Q+      T  L  +G V+  G 
Sbjct: 279 WKLFTWGDGDKFRLGHGNKDMYLKPTRVSPLIEYNFQQIACGHTMTVALTTSGHVFTMGS 338

Query: 402 MGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQ 461
              G LG P+       L   + D L    + +IS G +H   VT R  L+ +G     +
Sbjct: 339 TENGQLGNPNAAGKVPTL---VQDKLLGEFIEEISCGAHHVAAVTSRSELYTWGKGSNGR 395

Query: 462 LGHDTLRGCLEPTEIF 477
           LGH        PT + 
Sbjct: 396 LGHGDTDDRKSPTLVL 411



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 84/280 (30%), Positives = 129/280 (46%), Gaps = 18/280 (6%)

Query: 116 ITTGRYHTLLISNSSVFSC---GSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +  G +HT  +S    F     G+   G+LGHG E +  +  +   F     VV V+   
Sbjct: 148 VACGEFHTSAVSKCDNFFTWGDGTHNVGLLGHGNEISHWIPKSVNGFLDGLRVVSVACGS 207

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL- 231
            H+A    +G++FT GD +    GH D    +  P+ V+ L G+   +V  G+  T  + 
Sbjct: 208 WHSALATSNGKLFTFGDGTFGVLGHGD-QESVMYPKEVQLLSGLKTVKVACGVWHTAAII 266

Query: 232 ---------TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 282
                         + T G     +LGHG+      P  ++PL E  +  QIA G +  +
Sbjct: 267 EVAFQSGSNASSWKLFTWGDGDKFRLGHGNKDMYLKPTRVSPLIEY-NFQQIACGHTMTV 325

Query: 283 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
           A+T +G V++ GS  N  LG+     ++ P  +Q  +  G  +  +S G  HV A+ S  
Sbjct: 326 ALTTSGHVFTMGSTENGQLGNPNAAGKV-PTLVQD-KLLGEFIEEISCGAHHVAAVTSRS 383

Query: 343 YVYTWGKGYCGALGHGDEIDKTLPEPLSSLKS-HLAVQVC 381
            +YTWGKG  G LGHGD  D+  P  + +LK  HL    C
Sbjct: 384 ELYTWGKGSNGRLGHGDTDDRKSPTLVLALKDRHLKNISC 423



 Score = 92.0 bits (227), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 80/295 (27%), Positives = 133/295 (45%), Gaps = 21/295 (7%)

Query: 204 IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 263
           +  PRL+E+   +  + + +G +    ++  G V T G  + G+LGHG   D   P  + 
Sbjct: 79  VLTPRLLESTVVLDVRDIVSGTHHLAIVSREGKVFTWGEESGGRLGHGIDKDFGKPH-LV 137

Query: 264 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC--LGHGEQHDELQPRAIQTFRRK 321
              +V ++  +A G  +  AV+     +++G G++    LGHG +     P+++  F   
Sbjct: 138 EFPDVVTLDIVACGEFHTSAVSKCDNFFTWGDGTHNVGLLGHGNEISHWIPKSVNGF-LD 196

Query: 322 GIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVC 381
           G+ VV V+ G  H     S+G ++T+G G  G LGHGD+     P+ +  L     V+V 
Sbjct: 197 GLRVVSVACGSWHSALATSNGKLFTFGDGTFGVLGHGDQESVMYPKEVQLLSGLKTVKVA 256

Query: 382 ARKRKTFVLVDTGSVYG--------FGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVS 433
                T  +++     G        F W G G       G  D  L+P  +  L  ++  
Sbjct: 257 CGVWHTAAIIEVAFQSGSNASSWKLFTW-GDGDKFRLGHGNKDMYLKPTRVSPLIEYNFQ 315

Query: 434 QISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI-------FIQEM 481
           QI+ G   TV +T  G +F  G  E  QLG+    G + PT +       FI+E+
Sbjct: 316 QIACGHTMTVALTTSGHVFTMGSTENGQLGNPNAAGKV-PTLVQDKLLGEFIEEI 369



 Score = 56.2 bits (134), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 59/206 (28%), Positives = 88/206 (42%), Gaps = 16/206 (7%)

Query: 277 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVV 336
           G S    +   G VY +G    F  G   + D L PR +++     + V  + +G  H+ 
Sbjct: 49  GGSEADDIESKGDVYIWGEV--FADGFPSKTDVLTPRLLES--TVVLDVRDIVSGTHHLA 104

Query: 337 ALDSSGYVYTWGKGYCGALGHGDEIDKTLPEP-LSSLKS--HLAVQVCARKRKTFV-LVD 392
            +   G V+TWG+   G LGHG  IDK   +P L        L +  C     + V   D
Sbjct: 105 IVSREGKVFTWGEESGGRLGHG--IDKDFGKPHLVEFPDVVTLDIVACGEFHTSAVSKCD 162

Query: 393 TGSVYGFGWMGFGSLGFPDRGVSDKVLRPR--ILDSLRAHHVSQISTGLYHTVVVTDRGR 450
               +G G    G LG  +  +S  + +     LD LR   V  ++ G +H+ + T  G+
Sbjct: 163 NFFTWGDGTHNVGLLGHGNE-ISHWIPKSVNGFLDGLR---VVSVACGSWHSALATSNGK 218

Query: 451 LFGFGDNERAQLGHDTLRGCLEPTEI 476
           LF FGD     LGH      + P E+
Sbjct: 219 LFTFGDGTFGVLGHGDQESVMYPKEV 244



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 60/253 (23%), Positives = 94/253 (37%), Gaps = 70/253 (27%)

Query: 114 MQITTGRYHTLL-ISNSSVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSAS 171
           + +  G +H+ L  SN  +F+ G    GVLGHG +  + V + + +   S    V+V+  
Sbjct: 201 VSVACGSWHSALATSNGKLFTFGDGTFGVLGHGDQ--ESVMYPKEVQLLSGLKTVKVACG 258

Query: 172 ENHAAFVLQ----------SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQV 221
             H A +++          S ++FT GD   F  GH + +    +P  V  L     +Q+
Sbjct: 259 VWHTAAIIEVAFQSGSNASSWKLFTWGDGDKFRLGHGNKDM-YLKPTRVSPLIEYNFQQI 317

Query: 222 TAGLNFTGFLTIRGHVHTCGSNTHGQLG-------------------------------- 249
             G   T  LT  GHV T GS  +GQLG                                
Sbjct: 318 ACGHTMTVALTTSGHVFTMGSTENGQLGNPNAAGKVPTLVQDKLLGEFIEEISCGAHHVA 377

Query: 250 --------------------HGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 289
                               HGDT DR +P  +  L++   +  I+ G ++   V     
Sbjct: 378 AVTSRSELYTWGKGSNGRLGHGDTDDRKSPTLVLALKD-RHLKNISCGSNFTSCVCNQK- 435

Query: 290 VYSFGSGSNFCLG 302
            Y  G+  + C G
Sbjct: 436 -YVSGTDQSVCFG 447


>gi|403263469|ref|XP_003924054.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 isoform 2
           [Saimiri boliviensis boliviensis]
          Length = 988

 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 84/259 (32%), Positives = 124/259 (47%), Gaps = 5/259 (1%)

Query: 208 RLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEE 267
           R  E   G    Q  +G      L     VH+CG N+ GQLG         P+ +  L+ 
Sbjct: 15  RRTEGSPGAELLQAASGERHALLLLTNSLVHSCGENSRGQLGRRGAPRWDLPEPVQALKT 74

Query: 268 VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHD-ELQPRAIQTFRRKGIHVV 326
           +   + ++ G  + LAV   G V+++G+GS   LG GE  +    PR I T    GI ++
Sbjct: 75  LKFDL-VSCGKEHSLAVCHKGRVFAWGAGSEGQLGVGELKEINFTPRKITTL--NGIKII 131

Query: 327 RVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEI-DKTLPEPLSSLKSHLAVQVCARKR 385
           +VS G  H +AL     V++WGK   G LG G E   +  P+ + SL+     QV A   
Sbjct: 132 QVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEFPSQPSPQRVRSLEGIPLAQVAAGGA 191

Query: 386 KTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVV 445
            +F L   G+ +G+G    G L    R V  +  +P  + +L+   V  IS G  HT V+
Sbjct: 192 HSFALSLCGTSFGWGSNSAGQLALSGRNVQVQSNKPLSIGALKNLGVIYISCGDEHTAVL 251

Query: 446 TDRGRLFGFGDNERAQLGH 464
           +  G++F FGDN   QLG+
Sbjct: 252 SQDGKVFTFGDNSSGQLGY 270



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 86/299 (28%), Positives = 133/299 (44%), Gaps = 23/299 (7%)

Query: 114 MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHV 165
           +Q  +G  H LL+ +NS V SCG +  G LG         PE  Q +   + +       
Sbjct: 26  LQAASGERHALLLLTNSLVHSCGENSRGQLGRRGAPRWDLPEPVQALKTLKFDL------ 79

Query: 166 VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 225
             VS  + H+  V   G+VF  G  S    G  +     F PR +  L G+   QV+ G 
Sbjct: 80  --VSCGKEHSLAVCHKGRVFAWGAGSEGQLGVGELKEINFTPRKITTLNGIKIIQVSCGH 137

Query: 226 NFTGFLTIRGHVHTCGSNTHGQLGHGDTL-DRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 284
             +  L+    V + G N+HGQLG G     +P+P+ +  LE +  + Q+AAG ++  A+
Sbjct: 138 YHSLALSKDSQVFSWGKNSHGQLGLGKEFPSQPSPQRVRSLEGI-PLAQVAAGGAHSFAL 196

Query: 285 TGNGVVYSFGSGSNFCL---GHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 341
           +  G  + +GS S   L   G   Q    +P +I   +  G  V+ +S GDEH   L   
Sbjct: 197 SLCGTSFGWGSNSAGQLALSGRNVQVQSNKPLSIGALKNLG--VIYISCGDEHTAVLSQD 254

Query: 342 GYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 400
           G V+T+G    G LG+    +K  P+ +  +   ++   C        +  TG V  FG
Sbjct: 255 GKVFTFGDNSSGQLGYSPTPEKRGPQLVERIDGLVSQIDCGGDHTIAYVHTTGQVVSFG 313



 Score = 99.0 bits (245), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 89/301 (29%), Positives = 143/301 (47%), Gaps = 18/301 (5%)

Query: 163 AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 222
           A ++Q ++ E HA  +L +  V +CG+NS    G R   R    P  V+ALK +    V+
Sbjct: 23  AELLQAASGERHALLLLTNSLVHSCGENSRGQLGRRGAPRWDL-PEPVQALKTLKFDLVS 81

Query: 223 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLD-RPTPKSIAPLEEVGSVVQIAAGPSYM 281
            G   +  +  +G V   G+ + GQLG G+  +   TP+ I  L  +  ++Q++ G  + 
Sbjct: 82  CGKEHSLAVCHKGRVFAWGAGSEGQLGVGELKEINFTPRKITTLNGI-KIIQVSCGHYHS 140

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 341
           LA++ +  V+S+G  S+  LG G++    QP   +    +GI + +V+AG  H  AL   
Sbjct: 141 LALSKDSQVFSWGKNSHGQLGLGKEFPS-QPSPQRVRSLEGIPLAQVAAGGAHSFALSLC 199

Query: 342 GYVYTWGKGYCGAL---GHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYG 398
           G  + WG    G L   G   ++    P  + +LK+   + +      T VL   G V+ 
Sbjct: 200 GTSFGWGSNSAGQLALSGRNVQVQSNKPLSIGALKNLGVIYISCGDEHTAVLSQDGKVFT 259

Query: 399 FGWMGFGSLGF---PDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV-VTDRGRLFGF 454
           FG    G LG+   P++     V R   +D L    VSQI  G  HT+  V   G++  F
Sbjct: 260 FGDNSSGQLGYSPTPEKRGPQLVER---IDGL----VSQIDCGGDHTIAYVHTTGQVVSF 312

Query: 455 G 455
           G
Sbjct: 313 G 313


>gi|356536635|ref|XP_003536842.1| PREDICTED: uncharacterized protein LOC100812689 [Glycine max]
          Length = 1078

 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 98/323 (30%), Positives = 146/323 (45%), Gaps = 20/323 (6%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V Q+   + H A V + G+VFT G++S    GH    +   RP LVE+L       V  G
Sbjct: 263 VHQIGPGDRHIALVTRQGEVFTWGEDSGGRLGH-GFEKDFGRPHLVESLAITNVTFVACG 321

Query: 225 LNFTGFLTIRGHVHTCGSNTHGQ--LGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSYM 281
              +  ++  G + T G  THG   LGHG  +    PK ++ PLE +  VV +A G  + 
Sbjct: 322 EYHSCAVSTSGDLFTWGDGTHGAGLLGHGTDVSYWIPKRVSGPLEGL-QVVAVACGTWHS 380

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA---- 337
              T NG +++FG G    LGHG +     P+ +Q     G   ++V+ G  H  A    
Sbjct: 381 ALATSNGKLFTFGDGRFGVLGHGNRASVAYPKEVQLL--SGYKAIKVACGVWHSAAIIDV 438

Query: 338 LDSSG------YVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 391
           +D SG       ++TWG G    LGH ++     P  ++++  +   QV      T  L 
Sbjct: 439 MDLSGSKASAKRLFTWGDGDQYRLGHANKETYLEPTCVAAVAEYNFHQVACGYTMTVALT 498

Query: 392 DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRL 451
            +G V+  G   +G LG P+   SD  +   + D L    V +IS G  H  V+T R  L
Sbjct: 499 ASGHVFSMGGTTYGQLGNPN---SDGKVPILVRDKLVGEFVEEISCGANHVAVLTSRSEL 555

Query: 452 FGFGDNERAQLGHDTLRGCLEPT 474
           + +G     +LGH        PT
Sbjct: 556 YTWGRGANGRLGHGDTDDKKSPT 578



 Score = 89.0 bits (219), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 80/273 (29%), Positives = 125/273 (45%), Gaps = 21/273 (7%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSL--CGVLGHGPETTQCVSFTRINFP-SAAHVVQVSAS 171
           +  G YH+  +S S  +F+ G      G+LGHG + +  +   R++ P     VV V+  
Sbjct: 318 VACGEYHSCAVSTSGDLFTWGDGTHGAGLLGHGTDVSYWIP-KRVSGPLEGLQVVAVACG 376

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRP-IFRPRLVEALKGVPCKQVTAG------ 224
             H+A    +G++FT GD      GH   NR  +  P+ V+ L G    +V  G      
Sbjct: 377 TWHSALATSNGKLFTFGDGRFGVLGH--GNRASVAYPKEVQLLSGYKAIKVACGVWHSAA 434

Query: 225 ----LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 280
               ++ +G       + T G     +LGH +      P  +A + E  +  Q+A G + 
Sbjct: 435 IIDVMDLSGSKASAKRLFTWGDGDQYRLGHANKETYLEPTCVAAVAEY-NFHQVACGYTM 493

Query: 281 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 340
            +A+T +G V+S G  +   LG+    D   P  ++  +  G  V  +S G  HV  L S
Sbjct: 494 TVALTASGHVFSMGGTTYGQLGN-PNSDGKVPILVRD-KLVGEFVEEISCGANHVAVLTS 551

Query: 341 SGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
              +YTWG+G  G LGHGD  DK  P  + +LK
Sbjct: 552 RSELYTWGRGANGRLGHGDTDDKKSPTLVEALK 584



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 70/276 (25%), Positives = 125/276 (45%), Gaps = 13/276 (4%)

Query: 204 IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 263
           +  P+ +E+   +   Q+  G      +T +G V T G ++ G+LGHG   D   P  + 
Sbjct: 249 VLTPKPLESDVVLDVHQIGPGDRHIALVTRQGEVFTWGEDSGGRLGHGFEKDFGRPHLVE 308

Query: 264 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC--LGHGEQHDELQPRAIQTFRRK 321
            L  + +V  +A G  +  AV+ +G ++++G G++    LGHG       P+ + +   +
Sbjct: 309 SLA-ITNVTFVACGEYHSCAVSTSGDLFTWGDGTHGAGLLGHGTDVSYWIPKRV-SGPLE 366

Query: 322 GIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVC 381
           G+ VV V+ G  H     S+G ++T+G G  G LGHG+      P+ +  L  + A++V 
Sbjct: 367 GLQVVAVACGTWHSALATSNGKLFTFGDGRFGVLGHGNRASVAYPKEVQLLSGYKAIKVA 426

Query: 382 ARKRKTFVLVDTGSVYG--------FGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVS 433
                +  ++D   + G        F W G G          +  L P  + ++  ++  
Sbjct: 427 CGVWHSAAIIDVMDLSGSKASAKRLFTW-GDGDQYRLGHANKETYLEPTCVAAVAEYNFH 485

Query: 434 QISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG 469
           Q++ G   TV +T  G +F  G     QLG+    G
Sbjct: 486 QVACGYTMTVALTASGHVFSMGGTTYGQLGNPNSDG 521



 Score = 79.0 bits (193), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 64/235 (27%), Positives = 109/235 (46%), Gaps = 28/235 (11%)

Query: 114 MQITTGRYHTLL-ISNSSVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSAS 171
           + +  G +H+ L  SN  +F+ G    GVLGHG   +  V++ + +   S    ++V+  
Sbjct: 371 VAVACGTWHSALATSNGKLFTFGDGRFGVLGHGNRAS--VAYPKEVQLLSGYKAIKVACG 428

Query: 172 ENHAAFVLQ----------SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQV 221
             H+A ++           + ++FT GD   +  GH +       P  V A+      QV
Sbjct: 429 VWHSAAIIDVMDLSGSKASAKRLFTWGDGDQYRLGHAN-KETYLEPTCVAAVAEYNFHQV 487

Query: 222 TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL----EEVGSVVQ-IAA 276
             G   T  LT  GHV + G  T+GQLG+      P      P+    + VG  V+ I+ 
Sbjct: 488 ACGYTMTVALTASGHVFSMGGTTYGQLGN------PNSDGKVPILVRDKLVGEFVEEISC 541

Query: 277 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG 331
           G +++  +T    +Y++G G+N  LGHG+  D+  P  ++  + +  HV  +S G
Sbjct: 542 GANHVAVLTSRSELYTWGRGANGRLGHGDTDDKKSPTLVEALKDR--HVKNISCG 594



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 49/172 (28%), Positives = 75/172 (43%), Gaps = 8/172 (4%)

Query: 308 DELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPE 367
           D L P+ +++     +H  ++  GD H+  +   G V+TWG+   G LGHG E D   P 
Sbjct: 248 DVLTPKPLESDVVLDVH--QIGPGDRHIALVTRQGEVFTWGEDSGGRLGHGFEKDFGRPH 305

Query: 368 PLSSLKSHLAVQVCARKRKTFVLVDTGSV--YGFGWMGFGSLGFPDRGVSDKVLRP-RIL 424
            + SL       V   +  +  +  +G +  +G G  G G LG    G       P R+ 
Sbjct: 306 LVESLAITNVTFVACGEYHSCAVSTSGDLFTWGDGTHGAGLLG---HGTDVSYWIPKRVS 362

Query: 425 DSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 476
             L    V  ++ G +H+ + T  G+LF FGD     LGH        P E+
Sbjct: 363 GPLEGLQVVAVACGTWHSALATSNGKLFTFGDGRFGVLGHGNRASVAYPKEV 414



 Score = 41.2 bits (95), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 36/124 (29%), Positives = 57/124 (45%), Gaps = 3/124 (2%)

Query: 115 QITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
           Q+  G   T+ ++ S  VFS G +  G LG+ P +   V     +      V ++S   N
Sbjct: 486 QVACGYTMTVALTASGHVFSMGGTTYGQLGN-PNSDGKVPILVRDKLVGEFVEEISCGAN 544

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
           H A +    +++T G  ++   GH DT+     P LVEALK    K ++ G  FT  + +
Sbjct: 545 HVAVLTSRSELYTWGRGANGRLGHGDTDDKK-SPTLVEALKDRHVKNISCGSTFTSCICL 603

Query: 234 RGHV 237
              V
Sbjct: 604 HKWV 607


>gi|403377072|gb|EJY88530.1| hypothetical protein OXYTRI_12294 [Oxytricha trifallax]
          Length = 709

 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 101/423 (23%), Positives = 180/423 (42%), Gaps = 49/423 (11%)

Query: 75  SRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLISN--SSVF 132
           S+ ++ +   + + N++   +F +  +   D++E     M     +Y    I    + V+
Sbjct: 31  SKGIKEQTNYKEDQNFQSRKKFEEYEQEGEDLMEKC---MMSWPNKYSLDQIKKYHAYVW 87

Query: 133 SCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDN-- 190
           S G +  G LG G    + +   R+       V+ +S+   H+  V + G+++ CG N  
Sbjct: 88  SFGQNTKGELGTG-HYNEVLMPERVRGLPKLKVIFLSSGGKHSGLVTEDGKLWMCGSNLH 146

Query: 191 -----SSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTH 245
                     G + T +P      VE L  +  KQV  G   T  L+  G V+  G + H
Sbjct: 147 DKLGLEGITTGSKKTFKP------VELLTQIFIKQVACGDYHTLALSKEGQVYVWGGSLH 200

Query: 246 GQLGHGDTLDRPTPKSIAPLEEV---GSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLG 302
            + G      +   K    L +      + QI  G  + LA+  NG +YS+G G     G
Sbjct: 201 NKRGDRSQERKDNAKYKPVLLQSFAGKKIKQIDCGDFHSLALDDNGTLYSWGVGEKGECG 260

Query: 303 HGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEID 362
           HG+  D+  P+ I+ F   G  + ++ AG+ H +A+ +   VY WG G  G  G G+  +
Sbjct: 261 HGKFEDQETPQRIKFF--DGKIITQIEAGNHHTLAITADNQVYAWGDGRYGQCGFGEFEN 318

Query: 363 KTLP---------------------EPLSSLKSHLAV-QVCARKRKTFVLVDTGSVYGFG 400
             +P                     E L   K    + Q+ A +  T VL  +G ++ FG
Sbjct: 319 TAIPQLVNFPSQGNNTSYLDDSVQQEILEFFKDPPKIKQIAAGEMHTLVLTSSGQIFSFG 378

Query: 401 WMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERA 460
           +   G LG       D   RP++++ +  H   Q++ G  H++ +T++  ++  G+N+  
Sbjct: 379 YNQQGQLG---HNTVDNYCRPKLVEGMLNHKTVQVAAGRNHSLCLTNKNDVYACGNNQYG 435

Query: 461 QLG 463
           Q G
Sbjct: 436 QCG 438



 Score =  115 bits (289), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 87/315 (27%), Positives = 148/315 (46%), Gaps = 29/315 (9%)

Query: 184 VFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 243
           V++ G N+    G    N  +  P  V  L  +    +++G   +G +T  G +  CGSN
Sbjct: 86  VWSFGQNTKGELGTGHYNE-VLMPERVRGLPKLKVIFLSSGGKHSGLVTEDGKLWMCGSN 144

Query: 244 THGQLGHGDTLDRPTPKSIAPLEEVGSVV--QIAAGPSYMLAVTGNGVVYSFGSGSNFCL 301
            H +LG  + +   + K+  P+E +  +   Q+A G  + LA++  G VY +G   +   
Sbjct: 145 LHDKLGL-EGITTGSKKTFKPVELLTQIFIKQVACGDYHTLALSKEGQVYVWGGSLHNKR 203

Query: 302 GHGEQ----HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 357
           G   Q    + + +P  +Q+F   G  + ++  GD H +ALD +G +Y+WG G  G  GH
Sbjct: 204 GDRSQERKDNAKYKPVLLQSF--AGKKIKQIDCGDFHSLALDDNGTLYSWGVGEKGECGH 261

Query: 358 GDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYG-----FGWMGFGS------ 406
           G   D+  P+ +      +  Q+ A    T  +     VY      +G  GFG       
Sbjct: 262 GKFEDQETPQRIKFFDGKIITQIEAGNHHTLAITADNQVYAWGDGRYGQCGFGEFENTAI 321

Query: 407 ---LGFPDRGVS----DKVLRPRILDSLR-AHHVSQISTGLYHTVVVTDRGRLFGFGDNE 458
              + FP +G +    D  ++  IL+  +    + QI+ G  HT+V+T  G++F FG N+
Sbjct: 322 PQLVNFPSQGNNTSYLDDSVQQEILEFFKDPPKIKQIAAGEMHTLVLTSSGQIFSFGYNQ 381

Query: 459 RAQLGHDTLRGCLEP 473
           + QLGH+T+     P
Sbjct: 382 QGQLGHNTVDNYCRP 396



 Score =  112 bits (280), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 91/355 (25%), Positives = 159/355 (44%), Gaps = 30/355 (8%)

Query: 119 GRYHTLLISNSSVFSCGSSLCGVLG-HGPETTQCVSFTRINFPSAAHVVQVSASENHAAF 177
           G++  L+  +  ++ CGS+L   LG  G  T    +F  +   +   + QV+  + H   
Sbjct: 126 GKHSGLVTEDGKLWMCGSNLHDKLGLEGITTGSKKTFKPVELLTQIFIKQVACGDYHTLA 185

Query: 178 VLQSGQVFTCGDNSSFCCGHRDTNRP---IFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 234
           + + GQV+  G +     G R   R     ++P L+++  G   KQ+  G   +  L   
Sbjct: 186 LSKEGQVYVWGGSLHNKRGDRSQERKDNAKYKPVLLQSFAGKKIKQIDCGDFHSLALDDN 245

Query: 235 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLAVTGNGVVYSF 293
           G +++ G    G+ GHG   D+ TP+ I   +  G ++ QI AG  + LA+T +  VY++
Sbjct: 246 GTLYSWGVGEKGECGHGKFEDQETPQRIKFFD--GKIITQIEAGNHHTLAITADNQVYAW 303

Query: 294 GSGSNFCLGHGEQHDELQPR--------------------AIQTFRRKGIHVVRVSAGDE 333
           G G     G GE  +   P+                     I  F +    + +++AG+ 
Sbjct: 304 GDGRYGQCGFGEFENTAIPQLVNFPSQGNNTSYLDDSVQQEILEFFKDPPKIKQIAAGEM 363

Query: 334 HVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDT 393
           H + L SSG ++++G    G LGH    +   P+ +  + +H  VQV A +  +  L + 
Sbjct: 364 HTLVLTSSGQIFSFGYNQQGQLGHNTVDNYCRPKLVEGMLNHKTVQVAAGRNHSLCLTNK 423

Query: 394 GSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDR 448
             VY  G   +G  G PDR +        +L SL + +  ++  G +H+ VV D 
Sbjct: 424 NDVYACGNNQYGQCGLPDREMRKTF--SHVL-SLLSVNSFKLYAGGFHSWVVLDE 475


>gi|449685230|ref|XP_004210847.1| PREDICTED: serine/threonine-protein kinase Nek9-like [Hydra
           magnipapillata]
          Length = 1020

 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 103/351 (29%), Positives = 165/351 (47%), Gaps = 43/351 (12%)

Query: 159 FPSAAHVVQVSASENHAAFVLQSGQVFTCGDNS-------SFCCGHRDTNRPIFR-PRLV 210
           F   +  ++VSA   H A V    +++T  +           C G    NR ++R P+ V
Sbjct: 479 FTGGSTAIEVSAGFCHFAVVTIEKELYTWANIQGGTEIVGQLCHG----NRAMYRTPKRV 534

Query: 211 EALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLG----HGDTLDRPTPKSIAPLE 266
           +   G+P KQ   G +FT  LT  G V++CGS+ +G LG    +G  +   TP  I  L 
Sbjct: 535 DFFTGIPIKQAVCGEDFTIILTESGDVYSCGSDYYGCLGCEGIYGSNV--LTPIKIDALS 592

Query: 267 EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVV 326
           ++  VV IA G  +++A+T  G VY++G+G +  LG G Q+D   P+ + T   K  ++V
Sbjct: 593 KL-KVVSIACGDCHVVALTNIGSVYTWGNGEHGRLGLGNQNDFNLPQLV-TLPEKYNYIV 650

Query: 327 RVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEI------DK----------TLPEPLS 370
           +++ G ++   L S+G++  +G   C  L     I      DK          TLP P+ 
Sbjct: 651 KITCGRDNTFILTSNGHLLAFGNNECNKLALNQTISFKGNTDKSSTQQKVSYVTLPTPVR 710

Query: 371 SLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSL-RA 429
            L+S+  V + + K  + V+ + G +  FG   FG LG  D    +    P ++  L   
Sbjct: 711 PLRSYRIVSMASGKSHSAVVDEFGRLLTFGSNTFGELGLGDYQSRN---FPSLVSGLLNG 767

Query: 430 HHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG---CLEPTEIF 477
             V+  + G   TVV T   ++F +G  E  +LG +   G   C  P  IF
Sbjct: 768 KEVTICNCGDNFTVVATADNQIFSWGCGENGRLGLNLSNGITKCCSPKPIF 818



 Score = 79.7 bits (195), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 81/335 (24%), Positives = 140/335 (41%), Gaps = 28/335 (8%)

Query: 135 GSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFC 194
           G+ + G L HG          R++F +   + Q    E+    + +SG V++CG +   C
Sbjct: 513 GTEIVGQLCHGNRAMYRTP-KRVDFFTGIPIKQAVCGEDFTIILTESGDVYSCGSDYYGC 571

Query: 195 CGHRDT-NRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDT 253
            G        +  P  ++AL  +    +  G      LT  G V+T G+  HG+LG G+ 
Sbjct: 572 LGCEGIYGSNVLTPIKIDALSKLKVVSIACGDCHVVALTNIGSVYTWGNGEHGRLGLGNQ 631

Query: 254 LDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCL---------GHG 304
            D   P+ +   E+   +V+I  G      +T NG + +FG+     L         G+ 
Sbjct: 632 NDFNLPQLVTLPEKYNYIVKITCGRDNTFILTSNGHLLAFGNNECNKLALNQTISFKGNT 691

Query: 305 EQHDELQ-------PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 357
           ++    Q       P  ++  R     +V +++G  H   +D  G + T+G    G LG 
Sbjct: 692 DKSSTQQKVSYVTLPTPVRPLR--SYRIVSMASGKSHSAVVDEFGRLLTFGSNTFGELGL 749

Query: 358 GDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDK 417
           GD   +  P  +S L +   V +C      F +V T     F W G G  G     +S+ 
Sbjct: 750 GDYQSRNFPSLVSGLLNGKEVTIC-NCGDNFTVVATADNQIFSW-GCGENGRLGLNLSNG 807

Query: 418 VLR---PR-ILDSLRAHHVSQISTGLYHTVVVTDR 448
           + +   P+ I  SL  H V  ++   + T+++ +R
Sbjct: 808 ITKCCSPKPIFGSL--HKVVSMAARSWSTIILAER 840


>gi|218188915|gb|EEC71342.1| hypothetical protein OsI_03406 [Oryza sativa Indica Group]
          Length = 848

 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 93/322 (28%), Positives = 148/322 (45%), Gaps = 20/322 (6%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V Q++    H A   + G+VFT G+      GH  T+  I RP+LVE+L       ++ G
Sbjct: 258 VNQIACGTRHVALTTRQGEVFTWGEEFGGRLGH-GTDADISRPKLVESLSLTVVDLISCG 316

Query: 225 LNFTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSYM 281
              T  +T  G +   G  ++  G LG G  +    PK ++ PLE +  V+ +A G  + 
Sbjct: 317 EFHTCAVTTSGDLFNWGDGSYNVGLLGCGTEVSYWLPKKVSGPLEGL-QVLSVACGSWHS 375

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS- 340
              T +G +Y+FG G+   LGHG++     P+ ++     G   ++V+ G  H  A+   
Sbjct: 376 ALTTSSGKLYTFGDGTFGVLGHGDRETLAYPKEVEAL--SGFKTIKVACGIWHSAAIVEV 433

Query: 341 ---------SGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 391
                    S  +YTWG G    LGHGD+  + +P+ + +L  +   Q+      T  L 
Sbjct: 434 TNQTGANVMSKKLYTWGDGDKNRLGHGDKEPRLVPKCVQALLEYDFHQLACGHNMTVALA 493

Query: 392 DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRL 451
            +G V+  G    G LG P    SD      + D L +  V +IS G  H  V+T R  +
Sbjct: 494 TSGRVFTMGSSSNGQLGNPK---SDGKQPCLVQDRLASELVEEISCGASHVTVLTSRSEV 550

Query: 452 FGFGDNERAQLGHDTLRGCLEP 473
           + +G     +LGH  L+   +P
Sbjct: 551 YTWGMGANGRLGHGDLKDRKKP 572



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 89/272 (32%), Positives = 131/272 (48%), Gaps = 19/272 (6%)

Query: 116 ITTGRYHTLLISNS-SVFSCG--SSLCGVLGHGPETTQCVSFTRINFP-SAAHVVQVSAS 171
           I+ G +HT  ++ S  +F+ G  S   G+LG G E +  +   +++ P     V+ V+  
Sbjct: 313 ISCGEFHTCAVTTSGDLFNWGDGSYNVGLLGCGTEVSYWLP-KKVSGPLEGLQVLSVACG 371

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL------ 225
             H+A    SG+++T GD +    GH D     + P+ VEAL G    +V  G+      
Sbjct: 372 SWHSALTTSSGKLYTFGDGTFGVLGHGDRETLAY-PKEVEALSGFKTIKVACGIWHSAAI 430

Query: 226 ----NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 281
               N TG   +   ++T G     +LGHGD   R  PK +  L E     Q+A G +  
Sbjct: 431 VEVTNQTGANVMSKKLYTWGDGDKNRLGHGDKEPRLVPKCVQALLEY-DFHQLACGHNMT 489

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 341
           +A+  +G V++ GS SN  LG+  + D  QP  +Q  R     V  +S G  HV  L S 
Sbjct: 490 VALATSGRVFTMGSSSNGQLGN-PKSDGKQPCLVQD-RLASELVEEISCGASHVTVLTSR 547

Query: 342 GYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
             VYTWG G  G LGHGD  D+  P  + +LK
Sbjct: 548 SEVYTWGMGANGRLGHGDLKDRKKPCLVEALK 579



 Score = 99.8 bits (247), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 100/354 (28%), Positives = 147/354 (41%), Gaps = 40/354 (11%)

Query: 115 QITTGRYHTLLISNS-SVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHVV 166
           QI  G  H  L +    VF+ G    G LGHG       P+  + +S T ++        
Sbjct: 260 QIACGTRHVALTTRQGEVFTWGEEFGGRLGHGTDADISRPKLVESLSLTVVDL------- 312

Query: 167 QVSASENHAAFVLQSGQVFTCGDNSS----FCCGHRDTNRPIFRPRLVEA-LKGVPCKQV 221
            +S  E H   V  SG +F  GD S       CG   T    + P+ V   L+G+    V
Sbjct: 313 -ISCGEFHTCAVTTSGDLFNWGDGSYNVGLLGCG---TEVSYWLPKKVSGPLEGLQVLSV 368

Query: 222 TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 281
             G   +   T  G ++T G  T G LGHGD      PK +  L      +++A G  + 
Sbjct: 369 ACGSWHSALTTSSGKLYTFGDGTFGVLGHGDRETLAYPKEVEALSGF-KTIKVACGIWHS 427

Query: 282 LAV------TGNGVV----YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG 331
            A+      TG  V+    Y++G G    LGHG++   L P+ +Q       H  +++ G
Sbjct: 428 AAIVEVTNQTGANVMSKKLYTWGDGDKNRLGHGDKEPRLVPKCVQALLEYDFH--QLACG 485

Query: 332 DEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 391
               VAL +SG V+T G    G LG+     K        L S L  ++        VL 
Sbjct: 486 HNMTVALATSGRVFTMGSSSNGQLGNPKSDGKQPCLVQDRLASELVEEISCGASHVTVLT 545

Query: 392 DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVV 445
               VY +G    G LG  D  + D+  +P ++++L+  HV  IS G   T  +
Sbjct: 546 SRSEVYTWGMGANGRLGHGD--LKDRK-KPCLVEALKDRHVKSISCGSNFTTCI 596



 Score = 88.2 bits (217), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 78/293 (26%), Positives = 130/293 (44%), Gaps = 16/293 (5%)

Query: 204 IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 263
           +  P+ +E+   +   Q+  G       T +G V T G    G+LGHG   D   PK + 
Sbjct: 244 VLIPKPLESDVVLDVNQIACGTRHVALTTRQGEVFTWGEEFGGRLGHGTDADISRPKLVE 303

Query: 264 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC--LGHGEQHDELQPRAIQTFRRK 321
            L  +  V  I+ G  +  AVT +G ++++G GS     LG G +     P+ + +   +
Sbjct: 304 SL-SLTVVDLISCGEFHTCAVTTSGDLFNWGDGSYNVGLLGCGTEVSYWLPKKV-SGPLE 361

Query: 322 GIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVC 381
           G+ V+ V+ G  H     SSG +YT+G G  G LGHGD      P+ + +L     ++V 
Sbjct: 362 GLQVLSVACGSWHSALTTSSGKLYTFGDGTFGVLGHGDRETLAYPKEVEALSGFKTIKVA 421

Query: 382 ARKRKTFVLVDTGSVYG--------FGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVS 433
                +  +V+  +  G        + W G G       G  +  L P+ + +L  +   
Sbjct: 422 CGIWHSAAIVEVTNQTGANVMSKKLYTW-GDGDKNRLGHGDKEPRLVPKCVQALLEYDFH 480

Query: 434 QISTGLYHTVVVTDRGRLFGFGDNERAQLGH---DTLRGCLEPTEIFIQEMEE 483
           Q++ G   TV +   GR+F  G +   QLG+   D  + CL    +  + +EE
Sbjct: 481 QLACGHNMTVALATSGRVFTMGSSSNGQLGNPKSDGKQPCLVQDRLASELVEE 533



 Score = 60.8 bits (146), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 50/201 (24%), Positives = 88/201 (43%), Gaps = 8/201 (3%)

Query: 277 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVV 336
           G  Y+       V  S G  S+ C     + D L P+ +++     + V +++ G  HV 
Sbjct: 216 GDVYVWGEVWTDVTPSDGHTSSSC----SKVDVLIPKPLES--DVVLDVNQIACGTRHVA 269

Query: 337 ALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSV 396
                G V+TWG+ + G LGHG + D + P+ + SL   +   +   +  T  +  +G +
Sbjct: 270 LTTRQGEVFTWGEEFGGRLGHGTDADISRPKLVESLSLTVVDLISCGEFHTCAVTTSGDL 329

Query: 397 YGFGWMGFGSLGFPDRGVSDKVLRP-RILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFG 455
           + +G  G  ++G    G       P ++   L    V  ++ G +H+ + T  G+L+ FG
Sbjct: 330 FNWG-DGSYNVGLLGCGTEVSYWLPKKVSGPLEGLQVLSVACGSWHSALTTSSGKLYTFG 388

Query: 456 DNERAQLGHDTLRGCLEPTEI 476
           D     LGH        P E+
Sbjct: 389 DGTFGVLGHGDRETLAYPKEV 409


>gi|403263467|ref|XP_003924053.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 isoform 1
           [Saimiri boliviensis boliviensis]
          Length = 1024

 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 84/259 (32%), Positives = 124/259 (47%), Gaps = 5/259 (1%)

Query: 208 RLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEE 267
           R  E   G    Q  +G      L     VH+CG N+ GQLG         P+ +  L+ 
Sbjct: 15  RRTEGSPGAELLQAASGERHALLLLTNSLVHSCGENSRGQLGRRGAPRWDLPEPVQALKT 74

Query: 268 VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHD-ELQPRAIQTFRRKGIHVV 326
           +   + ++ G  + LAV   G V+++G+GS   LG GE  +    PR I T    GI ++
Sbjct: 75  LKFDL-VSCGKEHSLAVCHKGRVFAWGAGSEGQLGVGELKEINFTPRKITTL--NGIKII 131

Query: 327 RVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEI-DKTLPEPLSSLKSHLAVQVCARKR 385
           +VS G  H +AL     V++WGK   G LG G E   +  P+ + SL+     QV A   
Sbjct: 132 QVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEFPSQPSPQRVRSLEGIPLAQVAAGGA 191

Query: 386 KTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVV 445
            +F L   G+ +G+G    G L    R V  +  +P  + +L+   V  IS G  HT V+
Sbjct: 192 HSFALSLCGTSFGWGSNSAGQLALSGRNVQVQSNKPLSIGALKNLGVIYISCGDEHTAVL 251

Query: 446 TDRGRLFGFGDNERAQLGH 464
           +  G++F FGDN   QLG+
Sbjct: 252 SQDGKVFTFGDNSSGQLGY 270



 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 86/299 (28%), Positives = 133/299 (44%), Gaps = 23/299 (7%)

Query: 114 MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHV 165
           +Q  +G  H LL+ +NS V SCG +  G LG         PE  Q +   + +       
Sbjct: 26  LQAASGERHALLLLTNSLVHSCGENSRGQLGRRGAPRWDLPEPVQALKTLKFDL------ 79

Query: 166 VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 225
             VS  + H+  V   G+VF  G  S    G  +     F PR +  L G+   QV+ G 
Sbjct: 80  --VSCGKEHSLAVCHKGRVFAWGAGSEGQLGVGELKEINFTPRKITTLNGIKIIQVSCGH 137

Query: 226 NFTGFLTIRGHVHTCGSNTHGQLGHGDTL-DRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 284
             +  L+    V + G N+HGQLG G     +P+P+ +  LE +  + Q+AAG ++  A+
Sbjct: 138 YHSLALSKDSQVFSWGKNSHGQLGLGKEFPSQPSPQRVRSLEGI-PLAQVAAGGAHSFAL 196

Query: 285 TGNGVVYSFGSGSNFCL---GHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 341
           +  G  + +GS S   L   G   Q    +P +I   +  G  V+ +S GDEH   L   
Sbjct: 197 SLCGTSFGWGSNSAGQLALSGRNVQVQSNKPLSIGALKNLG--VIYISCGDEHTAVLSQD 254

Query: 342 GYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 400
           G V+T+G    G LG+    +K  P+ +  +   ++   C        +  TG V  FG
Sbjct: 255 GKVFTFGDNSSGQLGYSPTPEKRGPQLVERIDGLVSQIDCGGDHTIAYVHTTGQVVSFG 313



 Score = 99.0 bits (245), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 89/301 (29%), Positives = 143/301 (47%), Gaps = 18/301 (5%)

Query: 163 AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 222
           A ++Q ++ E HA  +L +  V +CG+NS    G R   R    P  V+ALK +    V+
Sbjct: 23  AELLQAASGERHALLLLTNSLVHSCGENSRGQLGRRGAPRWDL-PEPVQALKTLKFDLVS 81

Query: 223 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLD-RPTPKSIAPLEEVGSVVQIAAGPSYM 281
            G   +  +  +G V   G+ + GQLG G+  +   TP+ I  L  +  ++Q++ G  + 
Sbjct: 82  CGKEHSLAVCHKGRVFAWGAGSEGQLGVGELKEINFTPRKITTLNGI-KIIQVSCGHYHS 140

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 341
           LA++ +  V+S+G  S+  LG G++    QP   +    +GI + +V+AG  H  AL   
Sbjct: 141 LALSKDSQVFSWGKNSHGQLGLGKEFPS-QPSPQRVRSLEGIPLAQVAAGGAHSFALSLC 199

Query: 342 GYVYTWGKGYCGAL---GHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYG 398
           G  + WG    G L   G   ++    P  + +LK+   + +      T VL   G V+ 
Sbjct: 200 GTSFGWGSNSAGQLALSGRNVQVQSNKPLSIGALKNLGVIYISCGDEHTAVLSQDGKVFT 259

Query: 399 FGWMGFGSLGF---PDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV-VTDRGRLFGF 454
           FG    G LG+   P++     V R   +D L    VSQI  G  HT+  V   G++  F
Sbjct: 260 FGDNSSGQLGYSPTPEKRGPQLVER---IDGL----VSQIDCGGDHTIAYVHTTGQVVSF 312

Query: 455 G 455
           G
Sbjct: 313 G 313


>gi|293346825|ref|XP_001064216.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 [Rattus
           norvegicus]
          Length = 1149

 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 80/266 (30%), Positives = 130/266 (48%), Gaps = 5/266 (1%)

Query: 206 RPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL 265
           +PR +EA  G+   +  +G   +  L     V++CG N+ GQLG         P+ I  L
Sbjct: 169 QPRRLEAGTGLKLLKAASGERHSLLLFSNHRVYSCGDNSRGQLGQKSPQSTKRPEPIQAL 228

Query: 266 EEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHD-ELQPRAIQTFRRKGIH 324
             V  +  ++ G  + +AV   G V+++G+GS   LG GE  +    P  I +    GI 
Sbjct: 229 STV-HIDLVSCGKEHSVAVCHQGRVFTWGAGSEGQLGIGESKEISFMPTKINSL--AGIK 285

Query: 325 VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEI-DKTLPEPLSSLKSHLAVQVCAR 383
           +++VS G  H +AL   G V++WG    G LG G+ +  +  P+ + SL+     QV A 
Sbjct: 286 IIQVSCGHYHSLALSEDGQVFSWGSNRQGQLGLGNNLCSQASPQKVKSLEGIPLAQVAAG 345

Query: 384 KRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV 443
              +F L   G+ +G+G    G L        +++ +P  + +L+  +V  IS G  HT 
Sbjct: 346 GTHSFALSLMGTSFGWGNNRSGQLALSGNSAKEQIYKPHSIGALKTLNVVYISCGYEHTS 405

Query: 444 VVTDRGRLFGFGDNERAQLGHDTLRG 469
           V+T+ G++F FG +   QL H    G
Sbjct: 406 VLTEDGQVFTFGGSSSEQLQHSPRSG 431



 Score = 99.4 bits (246), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 84/293 (28%), Positives = 137/293 (46%), Gaps = 11/293 (3%)

Query: 114 MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGH-GPETTQCVSFTRINFPSAAHVVQVSAS 171
           ++  +G  H+LL+ SN  V+SCG +  G LG   P++T+      I   S  H+  VS  
Sbjct: 182 LKAASGERHSLLLFSNHRVYSCGDNSRGQLGQKSPQSTK--RPEPIQALSTVHIDLVSCG 239

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
           + H+  V   G+VFT G  S    G  ++    F P  + +L G+   QV+ G   +  L
Sbjct: 240 KEHSVAVCHQGRVFTWGAGSEGQLGIGESKEISFMPTKINSLAGIKIIQVSCGHYHSLAL 299

Query: 232 TIRGHVHTCGSNTHGQLGHGDTL-DRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 290
           +  G V + GSN  GQLG G+ L  + +P+ +  LE +  + Q+AAG ++  A++  G  
Sbjct: 300 SEDGQVFSWGSNRQGQLGLGNNLCSQASPQKVKSLEGI-PLAQVAAGGTHSFALSLMGTS 358

Query: 291 YSFG---SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 347
           + +G   SG     G+  +    +P +I     K ++VV +S G EH   L   G V+T+
Sbjct: 359 FGWGNNRSGQLALSGNSAKEQIYKPHSIGAL--KTLNVVYISCGYEHTSVLTEDGQVFTF 416

Query: 348 GKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 400
           G      L H     +  P+ +  +  H++   C        +  TG V   G
Sbjct: 417 GGSSSEQLQHSPRSGRGGPQLIEGIGGHVSQIECGSYHTIAYVYTTGQVVSLG 469



 Score = 92.4 bits (228), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 82/306 (26%), Positives = 146/306 (47%), Gaps = 14/306 (4%)

Query: 156 RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 215
           R+   +   +++ ++ E H+  +  + +V++CGDNS    G + + +   RP  ++AL  
Sbjct: 172 RLEAGTGLKLLKAASGERHSLLLFSNHRVYSCGDNSRGQLGQK-SPQSTKRPEPIQALST 230

Query: 216 VPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRP-TPKSIAPLEEVGSVVQI 274
           V    V+ G   +  +  +G V T G+ + GQLG G++ +    P  I  L  +  ++Q+
Sbjct: 231 VHIDLVSCGKEHSVAVCHQGRVFTWGAGSEGQLGIGESKEISFMPTKINSLAGI-KIIQV 289

Query: 275 AAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH-DELQPRAIQTFRRKGIHVVRVSAGDE 333
           + G  + LA++ +G V+S+GS     LG G     +  P+ +++   +GI + +V+AG  
Sbjct: 290 SCGHYHSLALSEDGQVFSWGSNRQGQLGLGNNLCSQASPQKVKSL--EGIPLAQVAAGGT 347

Query: 334 HVVALDSSGYVYTWGKGYCGAL---GHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVL 390
           H  AL   G  + WG    G L   G+  +     P  + +LK+   V +      T VL
Sbjct: 348 HSFALSLMGTSFGWGNNRSGQLALSGNSAKEQIYKPHSIGALKTLNVVYISCGYEHTSVL 407

Query: 391 VDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV-VTDRG 449
            + G V+ FG      L    R        P++++ +   HVSQI  G YHT+  V   G
Sbjct: 408 TEDGQVFTFGGSSSEQLQHSPRSGRGG---PQLIEGI-GGHVSQIECGSYHTIAYVYTTG 463

Query: 450 RLFGFG 455
           ++   G
Sbjct: 464 QVVSLG 469



 Score = 55.5 bits (132), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 51/187 (27%), Positives = 77/187 (41%), Gaps = 21/187 (11%)

Query: 114 MQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +Q++ G YH+L +S +  VFS GS+  G LG G       S  ++       + QV+A  
Sbjct: 287 IQVSCGHYHSLALSEDGQVFSWGSNRQGQLGLGNNLCSQASPQKVKSLEGIPLAQVAAGG 346

Query: 173 NHAAFVLQSGQVFTCGDNSS--FCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
            H+  +   G  F  G+N S             I++P  + ALK +    ++ G   T  
Sbjct: 347 THSFALSLMGTSFGWGNNRSGQLALSGNSAKEQIYKPHSIGALKTLNVVYISCGYEHTSV 406

Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPK------------------SIAPLEEVGSVV 272
           LT  G V T G ++  QL H     R  P+                  +IA +   G VV
Sbjct: 407 LTEDGQVFTFGGSSSEQLQHSPRSGRGGPQLIEGIGGHVSQIECGSYHTIAYVYTTGQVV 466

Query: 273 QIAAGPS 279
            +  GPS
Sbjct: 467 SLGRGPS 473


>gi|221485260|gb|EEE23541.1| regulator of chromosome condensation domain-containing protein,
           putative [Toxoplasma gondii GT1]
          Length = 1205

 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 109/400 (27%), Positives = 166/400 (41%), Gaps = 55/400 (13%)

Query: 115 QITTGRYHTLLI----SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSA 170
           ++  G YHTL++        +F  G +   VLG G E  + V    + F S     +VS 
Sbjct: 50  RVALGLYHTLVVGLKGDQPQLFGWGKNYSNVLGMGVEIRERVFPGLVPFFSKMGTFEVSC 109

Query: 171 SENHAAFVLQ-----SGQVFT-------------------CGDNSSFCCGHRDTNRPIFR 206
             N++A +++      G+V+T                    G    F    ++     F 
Sbjct: 110 GTNNSAVLVKRAQQPGGKVYTFGLGNRGRLGYPKNKADGVAGYQGDFSGDGQEDGPSWFT 169

Query: 207 PRLVEALKGVPCK--QVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP 264
           P+         CK  +++ G + T  L+  G ++  G  ++G LG GDT D  TP  +  
Sbjct: 170 PKPSRVRFRDKCKIARISCGADHTLALSDEGALYAWGVGSYGNLGQGDTSDSYTPVRVYL 229

Query: 265 LEEVGS------------------VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ 306
             E GS                  V   +AG  + +A T +G ++++G G N  LG G  
Sbjct: 230 GSEAGSGKKKENVGVGKVRADPVVVTCCSAGAKHSMACTSDGTLWTWGHGGNGRLGLGHN 289

Query: 307 HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP 366
              L P  +     + I  V V+AGD H   +D  G +YTWG G  G LGHGD+ +  +P
Sbjct: 290 RGSLSPAVVDYILDRDI--VFVNAGDSHSACIDRQGVLYTWGSGGFGRLGHGDQGEIPVP 347

Query: 367 EPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGF--PDRGVSDKVLRPRIL 424
             +        +QV      T  L   G+V  F W    +LGF   + G    V  P+ L
Sbjct: 348 RKVEGFGGVPVLQVACGTFHTLALTHKGTV--FAWGAGLALGFGEGEDGSGGMVAVPKHL 405

Query: 425 DSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 464
             + A  V  I+ G YH+  VT  G L  +G    ++LGH
Sbjct: 406 SDIEA-AVLNIAAGPYHSAAVTVGGDLLVWGVGGSSRLGH 444



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 104/422 (24%), Positives = 172/422 (40%), Gaps = 67/422 (15%)

Query: 115 QITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAH--------- 164
           +I+ G  HTL +S+  ++++ G    G LG G +T+   +  R+   S A          
Sbjct: 185 RISCGADHTLALSDEGALYAWGVGSYGNLGQG-DTSDSYTPVRVYLGSEAGSGKKKENVG 243

Query: 165 ----------VVQVSASENHAAFVLQSGQVFTCG--DNSSFCCGHRDTNRPIFRPRLVEA 212
                     V   SA   H+      G ++T G   N     GH   NR    P +V+ 
Sbjct: 244 VGKVRADPVVVTCCSAGAKHSMACTSDGTLWTWGHGGNGRLGLGH---NRGSLSPAVVDY 300

Query: 213 LKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV 272
           +       V AG + +  +  +G ++T GS   G+LGHGD  + P P+ +     V  V+
Sbjct: 301 ILDRDIVFVNAGDSHSACIDRQGVLYTWGSGGFGRLGHGDQGEIPVPRKVEGFGGV-PVL 359

Query: 273 QIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGD 332
           Q+A G  + LA+T  G V+++G+G     G GE          +        V+ ++AG 
Sbjct: 360 QVACGTFHTLALTHKGTVFAWGAGLALGFGEGEDGSGGMVAVPKHLSDIEAAVLNIAAGP 419

Query: 333 EHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQ-------VCARKR 385
            H  A+   G +  WG G    LGHGD+ ++  P+ ++ L++ + V        V   KR
Sbjct: 420 YHSAAVTVGGDLLVWGVGGSSRLGHGDQQNQPFPKYVADLRNRMYVSDLQSMLGVSRLKR 479

Query: 386 K-------------------------------TFVLVDTGSVYGFGWMGFGSLGFPDRGV 414
           +                               T  L   G+V+ +G    G LG  +  V
Sbjct: 480 EYSDLDVLDVPGTSGTNQSSWTLQSLECGESHTIALTGAGAVWVWGSNDDGQLGLGED-V 538

Query: 415 SDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPT 474
            +    P  L+   +  + +I+ G  H + V   G +F +G N+  QLG   +R   EP 
Sbjct: 539 EEDQYEPVKLECF-STPIRRIACGSKHCLAVAQYGDVFAWGANDNGQLGLGVVRPSFEPA 597

Query: 475 EI 476
            +
Sbjct: 598 AV 599



 Score = 75.1 bits (183), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 95/432 (21%), Positives = 163/432 (37%), Gaps = 78/432 (18%)

Query: 116 ITTGRYHTLLISNSSV-FSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           +  G  H+  I    V ++ GS   G LGHG +    V      F     V+QV+    H
Sbjct: 309 VNAGDSHSACIDRQGVLYTWGSGGFGRLGHGDQGEIPVPRKVEGF-GGVPVLQVACGTFH 367

Query: 175 AAFVLQSGQVFTCGDNSS--FCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
              +   G VF  G   +  F  G   +   +  P+ +  ++      + AG   +  +T
Sbjct: 368 TLALTHKGTVFAWGAGLALGFGEGEDGSGGMVAVPKHLSDIEAA-VLNIAAGPYHSAAVT 426

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--------------------------- 265
           + G +   G     +LGHGD  ++P PK +A L                           
Sbjct: 427 VGGDLLVWGVGGSSRLGHGDQQNQPFPKYVADLRNRMYVSDLQSMLGVSRLKREYSDLDV 486

Query: 266 ----------EEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGE--QHDELQPR 313
                     +   ++  +  G S+ +A+TG G V+ +GS  +  LG GE  + D+ +P 
Sbjct: 487 LDVPGTSGTNQSSWTLQSLECGESHTIALTGAGAVWVWGSNDDGQLGLGEDVEEDQYEPV 546

Query: 314 AIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
            ++ F      + R++ G +H +A+   G V+ WG    G LG G       P  +++L+
Sbjct: 547 KLECFS---TPIRRIACGSKHCLAVAQYGDVFAWGANDNGQLGLGVVRPSFEPAAVTALR 603

Query: 374 SHLAV------QVC------ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRP 421
             + V        C      A+        + G ++ +G    G LG  +   S  +L P
Sbjct: 604 QAVDVFCGDDYSACITSLGGAQSVSGETGTEFGDLWAWGAAESGKLGLGEDVASGSILTP 663

Query: 422 RI-----------LDSLRAH--------HVSQISTGLYHTVVVTDRGRLFGFGDNERAQL 462
           +            LDSL             S + +G  H++ +T +G  + +G     +L
Sbjct: 664 QKVVFSVPVCACSLDSLEMQAYKRVFCVSFSPLCSGTSHSLAITAQGECYAWGAGYYGRL 723

Query: 463 GHDTLRGCLEPT 474
           G  T      PT
Sbjct: 724 GIGTTANAYTPT 735



 Score = 62.8 bits (151), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 77/333 (23%), Positives = 122/333 (36%), Gaps = 54/333 (16%)

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCG-HRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
           E+H   +  +G V+  G N     G   D     + P  +E     P +++  G      
Sbjct: 509 ESHTIALTGAGAVWVWGSNDDGQLGLGEDVEEDQYEPVKLECFS-TPIRRIACGSKHCLA 567

Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTG---- 286
           +   G V   G+N +GQLG G       P ++  L +    V +  G  Y   +T     
Sbjct: 568 VAQYGDVFAWGANDNGQLGLGVVRPSFEPAAVTALRQA---VDVFCGDDYSACITSLGGA 624

Query: 287 ----------NGVVYSFGSGSNFCLGHGEQHDE---LQPRAI----------------QT 317
                      G ++++G+  +  LG GE       L P+ +                Q 
Sbjct: 625 QSVSGETGTEFGDLWAWGAAESGKLGLGEDVASGSILTPQKVVFSVPVCACSLDSLEMQA 684

Query: 318 FRRKGIHVVRVS---AGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKS 374
           ++R  +  V  S   +G  H +A+ + G  Y WG GY G LG G   +   P      K 
Sbjct: 685 YKR--VFCVSFSPLCSGTSHSLAITAQGECYAWGAGYYGRLGIGTTANAYTPTRCDFPKG 742

Query: 375 HLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAH---- 430
                V A    +  L   G ++ +G          D   +   + PRI   L       
Sbjct: 743 VRLRSVAAGACHSLALSMDGDLWFWGRR-------EDTCSTTNYMSPRIFMQLEGQGGVP 795

Query: 431 HVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 463
            V  IS    H++ VT+ G +F +GDN+  Q G
Sbjct: 796 KVKSISASERHSLAVTEAGEVFAWGDNKLYQTG 828



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 86/339 (25%), Positives = 122/339 (35%), Gaps = 85/339 (25%)

Query: 150 QCVSFTRINFPSAAHVVQVSASENHAAFVLQSG---QVFTCGDNSSFCCGHRDTNRPIFR 206
           Q V+  RI     A V +V+    H   V   G   Q+F  G N S   G     R    
Sbjct: 33  QEVAANRIARFGPASVKRVALGLYHTLVVGLKGDQPQLFGWGKNYSNVLGMGVEIRERVF 92

Query: 207 PRLVEALKGVPCKQVTAGLNFTGFLTIR-----GHVHTCGSNTHGQLGHGDTLDRPTPKS 261
           P LV     +   +V+ G N +  L  R     G V+T G    G+LG+        PK+
Sbjct: 93  PGLVPFFSKMGTFEVSCGTNNSAVLVKRAQQPGGKVYTFGLGNRGRLGY--------PKN 144

Query: 262 IAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH--DELQPRAIQTFR 319
            A                       +GV    G   +F  G G++       P+  +   
Sbjct: 145 KA-----------------------DGVA---GYQGDFS-GDGQEDGPSWFTPKPSRVRF 177

Query: 320 RKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQ 379
           R    + R+S G +H +AL   G +Y WG G  G LG GD  D   P     ++ +L  +
Sbjct: 178 RDKCKIARISCGADHTLALSDEGALYAWGVGSYGNLGQGDTSDSYTP-----VRVYLGSE 232

Query: 380 VCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGL 439
             + K+K  V                       GV      P +        V+  S G 
Sbjct: 233 AGSGKKKENV-----------------------GVGKVRADPVV--------VTCCSAGA 261

Query: 440 YHTVVVTDRGRL--FGFGDNERAQLGHDTLRGCLEPTEI 476
            H++  T  G L  +G G N R  LGH+  RG L P  +
Sbjct: 262 KHSMACTSDGTLWTWGHGGNGRLGLGHN--RGSLSPAVV 298



 Score = 50.1 bits (118), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 46/182 (25%), Positives = 83/182 (45%), Gaps = 10/182 (5%)

Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 290
           +T +G  +  G+  +G+LG G T +  TP      + V  +  +AAG  + LA++ +G +
Sbjct: 706 ITAQGECYAWGAGYYGRLGIGTTANAYTPTRCDFPKGV-RLRSVAAGACHSLALSMDGDL 764

Query: 291 YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKG--IHVVRVSAGDEHVVALDSSGYVYTWG 348
           + +G   + C       + + PR       +G    V  +SA + H +A+  +G V+ WG
Sbjct: 765 WFWGRREDTC----STTNYMSPRIFMQLEGQGGVPKVKSISASERHSLAVTEAGEVFAWG 820

Query: 349 KGYCGALGHGDEIDKTL--PEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGS 406
                  G G    + L  PE ++ L S     V    + +F ++ +G V+  G +  G 
Sbjct: 821 DNKLYQTGCGKRQAERLDRPERVAGLPSACQ-WVATGPQGSFFILASGEVFAAGVIKSGR 879

Query: 407 LG 408
           LG
Sbjct: 880 LG 881



 Score = 48.1 bits (113), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 32/90 (35%), Positives = 43/90 (47%), Gaps = 4/90 (4%)

Query: 164 HVVQVSASENHAAFVLQSGQVFTCGDNSSF--CCGHRDTNRPIFRPRLVEALKGVPCKQV 221
            V  +SASE H+  V ++G+VF  GDN  +   CG R   R + RP  V  L    C+ V
Sbjct: 796 KVKSISASERHSLAVTEAGEVFAWGDNKLYQTGCGKRQAER-LDRPERVAGLPSA-CQWV 853

Query: 222 TAGLNFTGFLTIRGHVHTCGSNTHGQLGHG 251
             G   + F+   G V   G    G+LG G
Sbjct: 854 ATGPQGSFFILASGEVFAAGVIKSGRLGTG 883



 Score = 46.2 bits (108), Expect = 0.038,   Method: Compositional matrix adjust.
 Identities = 47/185 (25%), Positives = 70/185 (37%), Gaps = 34/185 (18%)

Query: 325 VVRVSAGDEHVVALDSSG---YVYTWGKGYCGALGHGDEI-DKTLPEPLSSLKSHLAVQV 380
           V RV+ G  H + +   G    ++ WGK Y   LG G EI ++  P  +         +V
Sbjct: 48  VKRVALGLYHTLVVGLKGDQPQLFGWGKNYSNVLGMGVEIRERVFPGLVPFFSKMGTFEV 107

Query: 381 CARKRKTFVLVDT-----GSVYGFGWMGFGSLGFPDR---------------GVSD---- 416
                 + VLV       G VY FG    G LG+P                 G  D    
Sbjct: 108 SCGTNNSAVLVKRAQQPGGKVYTFGLGNRGRLGYPKNKADGVAGYQGDFSGDGQEDGPSW 167

Query: 417 ---KVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEP 473
              K  R R  D  +   +++IS G  HT+ ++D G L+ +G      LG         P
Sbjct: 168 FTPKPSRVRFRDKCK---IARISCGADHTLALSDEGALYAWGVGSYGNLGQGDTSDSYTP 224

Query: 474 TEIFI 478
             +++
Sbjct: 225 VRVYL 229


>gi|237835825|ref|XP_002367210.1| regulator of chromosome condensation domain-containing protein
           [Toxoplasma gondii ME49]
 gi|211964874|gb|EEB00070.1| regulator of chromosome condensation domain-containing protein
           [Toxoplasma gondii ME49]
 gi|221506115|gb|EEE31750.1| regulator of chromosome condensation domain-containing protein,
           putative [Toxoplasma gondii VEG]
          Length = 1205

 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 109/400 (27%), Positives = 166/400 (41%), Gaps = 55/400 (13%)

Query: 115 QITTGRYHTLLI----SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSA 170
           ++  G YHTL++        +F  G +   VLG G E  + V    + F S     +VS 
Sbjct: 50  RVALGLYHTLVVGLKGDQPQLFGWGKNYSNVLGMGVEIRERVFPGLVPFFSKMGTFEVSC 109

Query: 171 SENHAAFVLQ-----SGQVFT-------------------CGDNSSFCCGHRDTNRPIFR 206
             N++A +++      G+V+T                    G    F    ++     F 
Sbjct: 110 GTNNSAVLVKRAQQPGGKVYTFGLGNRGRLGYPKNKADGVAGYQGDFSGDGQEDGPSWFT 169

Query: 207 PRLVEALKGVPCK--QVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP 264
           P+         CK  +++ G + T  L+  G ++  G  ++G LG GDT D  TP  +  
Sbjct: 170 PKPSRVRFRDKCKIARISCGADHTLALSDEGALYAWGVGSYGNLGQGDTSDSYTPVRVYL 229

Query: 265 LEEVGS------------------VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ 306
             E GS                  V   +AG  + +A T +G ++++G G N  LG G  
Sbjct: 230 GSEAGSGKKKENVGVGKVRADPVIVTCCSAGAKHSMACTSDGTLWTWGHGGNGRLGLGHN 289

Query: 307 HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP 366
              L P  +     + I  V V+AGD H   +D  G +YTWG G  G LGHGD+ +  +P
Sbjct: 290 RGSLSPAVVDYILDRDI--VFVNAGDSHSACIDRQGVLYTWGSGGFGRLGHGDQGEIPVP 347

Query: 367 EPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGF--PDRGVSDKVLRPRIL 424
             +        +QV      T  L   G+V  F W    +LGF   + G    V  P+ L
Sbjct: 348 RKVEGFGGVPVLQVACGTFHTLALTHKGTV--FAWGAGLALGFGEGEDGSGGMVAVPKHL 405

Query: 425 DSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 464
             + A  V  I+ G YH+  VT  G L  +G    ++LGH
Sbjct: 406 SDIEA-AVLNIAAGPYHSAAVTVGGDLLVWGVGGSSRLGH 444



 Score = 99.8 bits (247), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 104/422 (24%), Positives = 172/422 (40%), Gaps = 67/422 (15%)

Query: 115 QITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAH--------- 164
           +I+ G  HTL +S+  ++++ G    G LG G +T+   +  R+   S A          
Sbjct: 185 RISCGADHTLALSDEGALYAWGVGSYGNLGQG-DTSDSYTPVRVYLGSEAGSGKKKENVG 243

Query: 165 ----------VVQVSASENHAAFVLQSGQVFTCG--DNSSFCCGHRDTNRPIFRPRLVEA 212
                     V   SA   H+      G ++T G   N     GH   NR    P +V+ 
Sbjct: 244 VGKVRADPVIVTCCSAGAKHSMACTSDGTLWTWGHGGNGRLGLGH---NRGSLSPAVVDY 300

Query: 213 LKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV 272
           +       V AG + +  +  +G ++T GS   G+LGHGD  + P P+ +     V  V+
Sbjct: 301 ILDRDIVFVNAGDSHSACIDRQGVLYTWGSGGFGRLGHGDQGEIPVPRKVEGFGGV-PVL 359

Query: 273 QIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGD 332
           Q+A G  + LA+T  G V+++G+G     G GE          +        V+ ++AG 
Sbjct: 360 QVACGTFHTLALTHKGTVFAWGAGLALGFGEGEDGSGGMVAVPKHLSDIEAAVLNIAAGP 419

Query: 333 EHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQ-------VCARKR 385
            H  A+   G +  WG G    LGHGD+ ++  P+ ++ L++ + V        V   KR
Sbjct: 420 YHSAAVTVGGDLLVWGVGGSSRLGHGDQQNQPFPKYVADLRNRMYVSDLQSMLGVSRLKR 479

Query: 386 K-------------------------------TFVLVDTGSVYGFGWMGFGSLGFPDRGV 414
           +                               T  L   G+V+ +G    G LG  +  V
Sbjct: 480 EYSDLDVLDVPGTSGTNQSSWTLQSLECGESHTIALTGAGAVWVWGSNDDGQLGLGED-V 538

Query: 415 SDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPT 474
            +    P  L+   +  + +I+ G  H + V   G +F +G N+  QLG   +R   EP 
Sbjct: 539 EEDQYEPVKLECF-STPIRRIACGSKHCLAVAQYGDVFAWGANDNGQLGLGVVRPSFEPA 597

Query: 475 EI 476
            +
Sbjct: 598 AV 599



 Score = 74.7 bits (182), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 95/432 (21%), Positives = 163/432 (37%), Gaps = 78/432 (18%)

Query: 116 ITTGRYHTLLISNSSV-FSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           +  G  H+  I    V ++ GS   G LGHG +    V      F     V+QV+    H
Sbjct: 309 VNAGDSHSACIDRQGVLYTWGSGGFGRLGHGDQGEIPVPRKVEGF-GGVPVLQVACGTFH 367

Query: 175 AAFVLQSGQVFTCGDNSS--FCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
              +   G VF  G   +  F  G   +   +  P+ +  ++      + AG   +  +T
Sbjct: 368 TLALTHKGTVFAWGAGLALGFGEGEDGSGGMVAVPKHLSDIEAA-VLNIAAGPYHSAAVT 426

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--------------------------- 265
           + G +   G     +LGHGD  ++P PK +A L                           
Sbjct: 427 VGGDLLVWGVGGSSRLGHGDQQNQPFPKYVADLRNRMYVSDLQSMLGVSRLKREYSDLDV 486

Query: 266 ----------EEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGE--QHDELQPR 313
                     +   ++  +  G S+ +A+TG G V+ +GS  +  LG GE  + D+ +P 
Sbjct: 487 LDVPGTSGTNQSSWTLQSLECGESHTIALTGAGAVWVWGSNDDGQLGLGEDVEEDQYEPV 546

Query: 314 AIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
            ++ F      + R++ G +H +A+   G V+ WG    G LG G       P  +++L+
Sbjct: 547 KLECFS---TPIRRIACGSKHCLAVAQYGDVFAWGANDNGQLGLGVVRPSFEPAAVTALR 603

Query: 374 SHLAV------QVC------ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRP 421
             + V        C      A+        + G ++ +G    G LG  +   S  +L P
Sbjct: 604 QAVDVFCGDDYSACITSLGGAQSVSGETGTEFGDLWAWGAAESGKLGLGEDVASGSILTP 663

Query: 422 RI-----------LDSLRAH--------HVSQISTGLYHTVVVTDRGRLFGFGDNERAQL 462
           +            LDSL             S + +G  H++ +T +G  + +G     +L
Sbjct: 664 QKVVFSVPVCACSLDSLEMQAYKRVFCVSFSPLCSGTSHSLAITAQGECYAWGAGYYGRL 723

Query: 463 GHDTLRGCLEPT 474
           G  T      PT
Sbjct: 724 GIGTTANAYTPT 735



 Score = 62.8 bits (151), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 77/333 (23%), Positives = 122/333 (36%), Gaps = 54/333 (16%)

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCG-HRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
           E+H   +  +G V+  G N     G   D     + P  +E     P +++  G      
Sbjct: 509 ESHTIALTGAGAVWVWGSNDDGQLGLGEDVEEDQYEPVKLECFS-TPIRRIACGSKHCLA 567

Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTG---- 286
           +   G V   G+N +GQLG G       P ++  L +    V +  G  Y   +T     
Sbjct: 568 VAQYGDVFAWGANDNGQLGLGVVRPSFEPAAVTALRQA---VDVFCGDDYSACITSLGGA 624

Query: 287 ----------NGVVYSFGSGSNFCLGHGEQHDE---LQPRAI----------------QT 317
                      G ++++G+  +  LG GE       L P+ +                Q 
Sbjct: 625 QSVSGETGTEFGDLWAWGAAESGKLGLGEDVASGSILTPQKVVFSVPVCACSLDSLEMQA 684

Query: 318 FRRKGIHVVRVS---AGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKS 374
           ++R  +  V  S   +G  H +A+ + G  Y WG GY G LG G   +   P      K 
Sbjct: 685 YKR--VFCVSFSPLCSGTSHSLAITAQGECYAWGAGYYGRLGIGTTANAYTPTRCDFPKG 742

Query: 375 HLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAH---- 430
                V A    +  L   G ++ +G          D   +   + PRI   L       
Sbjct: 743 VRLRSVAAGACHSLALSMDGDLWFWGRR-------EDTCSTTNYMSPRIFMQLEGQGGVP 795

Query: 431 HVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 463
            V  IS    H++ VT+ G +F +GDN+  Q G
Sbjct: 796 KVKSISASERHSLAVTEAGEVFAWGDNKLYQTG 828



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 87/339 (25%), Positives = 122/339 (35%), Gaps = 85/339 (25%)

Query: 150 QCVSFTRINFPSAAHVVQVSASENHAAFVLQSG---QVFTCGDNSSFCCGHRDTNRPIFR 206
           Q V+  RI     A V +V+    H   V   G   Q+F  G N S   G     R    
Sbjct: 33  QEVAANRIARFGPASVKRVALGLYHTLVVGLKGDQPQLFGWGKNYSNVLGMGVEIRERVF 92

Query: 207 PRLVEALKGVPCKQVTAGLNFTGFLTIR-----GHVHTCGSNTHGQLGHGDTLDRPTPKS 261
           P LV     +   +V+ G N +  L  R     G V+T G    G+LG+        PK+
Sbjct: 93  PGLVPFFSKMGTFEVSCGTNNSAVLVKRAQQPGGKVYTFGLGNRGRLGY--------PKN 144

Query: 262 IAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH--DELQPRAIQTFR 319
            A                       +GV    G   +F  G G++       P+  +   
Sbjct: 145 KA-----------------------DGVA---GYQGDFS-GDGQEDGPSWFTPKPSRVRF 177

Query: 320 RKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQ 379
           R    + R+S G +H +AL   G +Y WG G  G LG GD  D   P     ++ +L  +
Sbjct: 178 RDKCKIARISCGADHTLALSDEGALYAWGVGSYGNLGQGDTSDSYTP-----VRVYLGSE 232

Query: 380 VCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGL 439
             + K+K  V                       GV      P I        V+  S G 
Sbjct: 233 AGSGKKKENV-----------------------GVGKVRADPVI--------VTCCSAGA 261

Query: 440 YHTVVVTDRGRL--FGFGDNERAQLGHDTLRGCLEPTEI 476
            H++  T  G L  +G G N R  LGH+  RG L P  +
Sbjct: 262 KHSMACTSDGTLWTWGHGGNGRLGLGHN--RGSLSPAVV 298



 Score = 50.1 bits (118), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 46/182 (25%), Positives = 83/182 (45%), Gaps = 10/182 (5%)

Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 290
           +T +G  +  G+  +G+LG G T +  TP      + V  +  +AAG  + LA++ +G +
Sbjct: 706 ITAQGECYAWGAGYYGRLGIGTTANAYTPTRCDFPKGV-RLRSVAAGACHSLALSMDGDL 764

Query: 291 YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKG--IHVVRVSAGDEHVVALDSSGYVYTWG 348
           + +G   + C       + + PR       +G    V  +SA + H +A+  +G V+ WG
Sbjct: 765 WFWGRREDTC----STTNYMSPRIFMQLEGQGGVPKVKSISASERHSLAVTEAGEVFAWG 820

Query: 349 KGYCGALGHGDEIDKTL--PEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGS 406
                  G G    + L  PE ++ L S     V    + +F ++ +G V+  G +  G 
Sbjct: 821 DNKLYQTGCGKRQAERLDRPERVAGLPSACQ-WVATGPQGSFFILASGEVFAAGVIKSGR 879

Query: 407 LG 408
           LG
Sbjct: 880 LG 881



 Score = 48.1 bits (113), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 32/90 (35%), Positives = 43/90 (47%), Gaps = 4/90 (4%)

Query: 164 HVVQVSASENHAAFVLQSGQVFTCGDNSSF--CCGHRDTNRPIFRPRLVEALKGVPCKQV 221
            V  +SASE H+  V ++G+VF  GDN  +   CG R   R + RP  V  L    C+ V
Sbjct: 796 KVKSISASERHSLAVTEAGEVFAWGDNKLYQTGCGKRQAER-LDRPERVAGLPSA-CQWV 853

Query: 222 TAGLNFTGFLTIRGHVHTCGSNTHGQLGHG 251
             G   + F+   G V   G    G+LG G
Sbjct: 854 ATGPQGSFFILASGEVFAAGVIKSGRLGTG 883



 Score = 46.2 bits (108), Expect = 0.039,   Method: Compositional matrix adjust.
 Identities = 47/185 (25%), Positives = 70/185 (37%), Gaps = 34/185 (18%)

Query: 325 VVRVSAGDEHVVALDSSG---YVYTWGKGYCGALGHGDEI-DKTLPEPLSSLKSHLAVQV 380
           V RV+ G  H + +   G    ++ WGK Y   LG G EI ++  P  +         +V
Sbjct: 48  VKRVALGLYHTLVVGLKGDQPQLFGWGKNYSNVLGMGVEIRERVFPGLVPFFSKMGTFEV 107

Query: 381 CARKRKTFVLVDT-----GSVYGFGWMGFGSLGFPDR---------------GVSD---- 416
                 + VLV       G VY FG    G LG+P                 G  D    
Sbjct: 108 SCGTNNSAVLVKRAQQPGGKVYTFGLGNRGRLGYPKNKADGVAGYQGDFSGDGQEDGPSW 167

Query: 417 ---KVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEP 473
              K  R R  D  +   +++IS G  HT+ ++D G L+ +G      LG         P
Sbjct: 168 FTPKPSRVRFRDKCK---IARISCGADHTLALSDEGALYAWGVGSYGNLGQGDTSDSYTP 224

Query: 474 TEIFI 478
             +++
Sbjct: 225 VRVYL 229


>gi|114595107|ref|XP_001160807.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 isoform 1
           [Pan troglodytes]
          Length = 984

 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 89/274 (32%), Positives = 130/274 (47%), Gaps = 8/274 (2%)

Query: 193 FCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGD 252
           FC G   T+    + R      G    Q  +G   +  L     V +CG N+ GQLG   
Sbjct: 3   FCWG---TDSRELQRRRTAGSPGAELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRG 59

Query: 253 TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGE-QHDELQ 311
                 P+ I  LE + +V  ++ G  + LAV   G V+++G+GS   LG GE +     
Sbjct: 60  AQRGELPEPIQALETL-TVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFT 118

Query: 312 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEI-DKTLPEPLS 370
           P+ I T    GI +++VS G  H +AL     V++WGK   G LG G E   +  P+ + 
Sbjct: 119 PKKITTL--NGIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEFPSQASPQRVR 176

Query: 371 SLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAH 430
           SL+     QV A    +F L   G+ +G+G    G L    R V  +  +P  + +L+  
Sbjct: 177 SLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSSGQLALSGRNVPVQSNKPLSVGALKNL 236

Query: 431 HVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 464
            V  IS G  HT V+T  G++F FGDN   QLG+
Sbjct: 237 GVVYISCGDAHTAVLTQDGKVFTFGDNRSGQLGY 270



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 89/302 (29%), Positives = 147/302 (48%), Gaps = 20/302 (6%)

Query: 163 AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 222
           A ++Q ++ E H+  +L + +V +CGDNS    G R   R    P  ++AL+ +    V+
Sbjct: 23  AELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGEL-PEPIQALETLTVDLVS 81

Query: 223 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRP-TPKSIAPLEEVGSVVQIAAGPSYM 281
            G   +  +  +G V   G+ + GQLG G+  +   TPK I  L  +  ++Q++ G  + 
Sbjct: 82  CGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKITTLNGI-KIIQVSCGHYHS 140

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQH-DELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 340
           LA++ +  V+S+G  S+  LG G++   +  P+ +++   +GI + +V+AG  H  AL  
Sbjct: 141 LALSKDSQVFSWGKNSHGQLGLGKEFPSQASPQRVRSL--EGIPLAQVAAGGAHSFALSL 198

Query: 341 SGYVYTWGKGYCGAL---GHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVY 397
            G  + WG    G L   G    +    P  + +LK+   V +      T VL   G V+
Sbjct: 199 CGTSFGWGSNSSGQLALSGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGKVF 258

Query: 398 GFGWMGFGSLGF---PDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV-VTDRGRLFG 453
            FG    G LG+   P++     V R   +D L    VSQI  G YHT+  V   G++  
Sbjct: 259 TFGDNRSGQLGYSPTPEKRGPQLVER---IDGL----VSQIDCGSYHTLAYVHTTGQVVS 311

Query: 454 FG 455
           FG
Sbjct: 312 FG 313



 Score = 91.7 bits (226), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 80/297 (26%), Positives = 132/297 (44%), Gaps = 19/297 (6%)

Query: 114 MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHV 165
           +Q  +G  H+LL+ +N  V SCG +  G LG         PE  Q +    ++       
Sbjct: 26  LQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGELPEPIQALETLTVDL------ 79

Query: 166 VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 225
             VS  + H+  V   G+VF  G  S    G  +     F P+ +  L G+   QV+ G 
Sbjct: 80  --VSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKITTLNGIKIIQVSCGH 137

Query: 226 NFTGFLTIRGHVHTCGSNTHGQLGHGDTL-DRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 284
             +  L+    V + G N+HGQLG G     + +P+ +  LE +  + Q+AAG ++  A+
Sbjct: 138 YHSLALSKDSQVFSWGKNSHGQLGLGKEFPSQASPQRVRSLEGI-PLAQVAAGGAHSFAL 196

Query: 285 TGNGVVYSFGSGSNFCLGHGEQHDELQP-RAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 343
           +  G  + +GS S+  L    ++  +Q  + +     K + VV +S GD H   L   G 
Sbjct: 197 SLCGTSFGWGSNSSGQLALSGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGK 256

Query: 344 VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 400
           V+T+G    G LG+    +K  P+ +  +   ++   C        +  TG V  FG
Sbjct: 257 VFTFGDNRSGQLGYSPTPEKRGPQLVERIDGLVSQIDCGSYHTLAYVHTTGQVVSFG 313


>gi|444919547|ref|ZP_21239559.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
 gi|444708350|gb|ELW49425.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
          Length = 684

 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 108/364 (29%), Positives = 166/364 (45%), Gaps = 23/364 (6%)

Query: 114 MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           + +  G  H+L L S+ +V++ G++  G LG G  T + V    +     + VV + A  
Sbjct: 189 VAVEAGSSHSLALRSDGTVWAWGANASGQLGDGTTTKRLVPVQVL-----SGVVAMEAGS 243

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            ++  V   G V+  G N S   G  DT      P  V  L  V    V AG + +  L 
Sbjct: 244 GYSLAVRNDGTVWAWGYNFSGQLGD-DTVTSRSTPVQVLGLSEVVA--VAAGSSLSLALR 300

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
             G V   GSN +GQ G G T +R  P     L      V +AAG ++ LAV  +G V++
Sbjct: 301 SDGTVWAWGSNDYGQRGEGTTSNRAFPVQARGLS---GGVAVAAGYAHSLAVRSDGTVWA 357

Query: 293 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 352
           +GS ++  LG G   +  +P  +Q        VV VSAG    +A+ S G V+ WG    
Sbjct: 358 WGSNASGQLGEGTTSNRSEPVQVQGLS----GVVAVSAGASSSLAIRSDGTVWAWGSNAS 413

Query: 353 GALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDR 412
           G LG G   D+ +P  +  L   +A  V A    +  + + G+V+G+G+ G+G LG    
Sbjct: 414 GQLGDGTTTDRLVPVQVQGLSGVVA--VVAGTSFSLAVRNDGTVWGWGYNGYGQLGTF-- 469

Query: 413 GVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLE 472
             S  VL P  +  L    V  ++ G  H++ V   G ++  G N+  QLG  +      
Sbjct: 470 -TSLFVLVPVQVTGLSG--VVAVAAGNLHSLAVRSDGTVWALGRNDNGQLGDGSWTNRSA 526

Query: 473 PTEI 476
           P ++
Sbjct: 527 PVQV 530



 Score =  108 bits (270), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 105/357 (29%), Positives = 164/357 (45%), Gaps = 24/357 (6%)

Query: 111 AGNMQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS 169
           +G + +  G  H+L + S+ +V++ GS+  G LG G  + +      +     + VV VS
Sbjct: 334 SGGVAVAAGYAHSLAVRSDGTVWAWGSNASGQLGEGTTSNRS---EPVQVQGLSGVVAVS 390

Query: 170 ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
           A  + +  +   G V+  G N+S   G   T   +  P  V+ L GV    V AG +F+ 
Sbjct: 391 AGASSSLAIRSDGTVWAWGSNASGQLGDGTTTDRLV-PVQVQGLSGVVA--VVAGTSFS- 446

Query: 230 FLTIR--GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN 287
            L +R  G V   G N +GQLG   +L    P  +  L     VV +AAG  + LAV  +
Sbjct: 447 -LAVRNDGTVWGWGYNGYGQLGTFTSLFVLVPVQVTGLS---GVVAVAAGNLHSLAVRSD 502

Query: 288 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 347
           G V++ G   N  LG G   +   P  +Q     G  VV V+AGD H +A+   G V+ W
Sbjct: 503 GTVWALGRNDNGQLGDGSWTNRSAP--VQVTGLSG--VVSVAAGDSHSLAVRYDGSVWAW 558

Query: 348 GKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSL 407
           G    G LG G    ++ P  ++ L    +  V A    +  +   G+V+ +G+  +G L
Sbjct: 559 GYNSFGQLGDGSWFQRSAPVQVTGLSGRGS--VAASSDYSMAVRYDGTVWAWGFNLYGQL 616

Query: 408 GFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 464
           G  D   S   L P  +  LR   V  +  G  H++ +   G ++ +G N   QLG+
Sbjct: 617 G--DGTTSSNQLVPVQVQQLRG--VVAVEVGSSHSLALRSDGTVWTWGYNSFGQLGN 669



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 89/299 (29%), Positives = 131/299 (43%), Gaps = 25/299 (8%)

Query: 182 GQVFTCGDNSS--FCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 239
           G V+  G+N S     G RD      R   V+ L         AG   +  L   G V  
Sbjct: 5   GTVWAAGNNGSGQLGDGTRDN-----RSTPVQVLGLSEVVAAAAGSIHSLALRNDGTVWA 59

Query: 240 CGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNF 299
            G N +GQLG+G    R  P  +  L      V + AG  + LAV  +G V+++G   N 
Sbjct: 60  WGYNGYGQLGNGSLGSRAEPVQVQGLS---GGVSVDAGHYHSLAVRDDGTVWAWGDNPNG 116

Query: 300 CLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGD 359
            LG G     L P  +Q        VV V+AG  H +AL S G V+ WG    G LG G 
Sbjct: 117 QLGEGTTTRRLVPVQVQGLS----EVVAVTAGSSHSLALRSDGTVWAWGANASGQLGEGT 172

Query: 360 EIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVL 419
             ++ +P P+  L   +AV+  A    +  L   G+V+ +G    G LG    G + K L
Sbjct: 173 TTNRLVPVPVLGLSEVVAVE--AGSSHSLALRSDGTVWAWGANASGQLG---DGTTTKRL 227

Query: 420 RP-RILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF 477
            P ++L  + A     +  G  +++ V + G ++ +G N   QLG DT+     P ++ 
Sbjct: 228 VPVQVLSGVVA-----MEAGSGYSLAVRNDGTVWAWGYNFSGQLGDDTVTSRSTPVQVL 281



 Score = 76.6 bits (187), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 81/261 (31%), Positives = 113/261 (43%), Gaps = 17/261 (6%)

Query: 107 VETSAGNMQITTGRYHTLLISN-SSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHV 165
           V+  +G + +  G   +L + N  +V+  G +  G LG     T       +     + V
Sbjct: 430 VQGLSGVVAVVAGTSFSLAVRNDGTVWGWGYNGYGQLG---TFTSLFVLVPVQVTGLSGV 486

Query: 166 VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRD-TNRPIFRPRLVEALKGVPCKQVTAG 224
           V V+A   H+  V   G V+  G N +   G    TNR    P  V  L GV    V AG
Sbjct: 487 VAVAAGNLHSLAVRSDGTVWALGRNDNGQLGDGSWTNRSA--PVQVTGLSGVVS--VAAG 542

Query: 225 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 284
            + +  +   G V   G N+ GQLG G    R  P  +  L   GSV   AA   Y +AV
Sbjct: 543 DSHSLAVRYDGSVWAWGYNSFGQLGDGSWFQRSAPVQVTGLSGRGSV---AASSDYSMAV 599

Query: 285 TGNGVVYSFGSGSNFCLGHGE-QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 343
             +G V+++G      LG G    ++L P  +Q  R     VV V  G  H +AL S G 
Sbjct: 600 RYDGTVWAWGFNLYGQLGDGTTSSNQLVPVQVQQLR----GVVAVEVGSSHSLALRSDGT 655

Query: 344 VYTWGKGYCGALGHGDEIDKT 364
           V+TWG    G LG+G  +  T
Sbjct: 656 VWTWGYNSFGQLGNGPPLYAT 676


>gi|15237253|ref|NP_197108.1| regulator of chromosome condensation repeat-containing protein
           [Arabidopsis thaliana]
 gi|9755650|emb|CAC01803.1| UVB-resistance protein-like [Arabidopsis thaliana]
 gi|114213505|gb|ABI54335.1| At5g16040 [Arabidopsis thaliana]
 gi|332004857|gb|AED92240.1| regulator of chromosome condensation repeat-containing protein
           [Arabidopsis thaliana]
          Length = 396

 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 99/365 (27%), Positives = 163/365 (44%), Gaps = 26/365 (7%)

Query: 125 LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQV 184
           + S +SV + GS   G LG G +  + ++ + ++     +V  V     ++  +   G++
Sbjct: 1   MASATSVIAWGSGEDGQLGLGTDEEKELA-SVVDALEPFNVRSVVGGSRNSLAICDDGKL 59

Query: 185 FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNT 244
           FT G N     GH    +    P LV++L  V   Q   G      +  +G  +  G N 
Sbjct: 60  FTWGWNQRGTLGHPPETKTESTPSLVKSLANVKIVQAAIGGWHCLAVDDQGRAYAWGGNE 119

Query: 245 HGQLGHGDTLD---RPTPKSIAPLEEVG---SVVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
           +GQ G   + D   RP  + I   +      +V Q+AAG ++ + +T  G V+++G    
Sbjct: 120 YGQCGEEPSKDETGRPVRRDIVIPKRCAQQLTVRQVAAGGTHSVVLTREGYVWTWGQ--- 176

Query: 299 FCLGHGEQHDELQPRAIQTF----RRKGIHVVR-VSAGDEHVVALDSSGYVYTWGKGYCG 353
                        P  I+      R +G+  VR ++ G  H +AL   G ++ WG    G
Sbjct: 177 ----------PWPPGDIKQISVPVRVQGLENVRLIAVGAFHNLALKEDGTLWAWGNNEYG 226

Query: 354 ALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRG 413
            LG GD   ++ P P+  L     V + A    +  L + G VYG+G    G LGF D  
Sbjct: 227 QLGTGDTQPRSYPIPVQGLDDLTLVDIAAGGWHSTALTNEGEVYGWGRGEHGRLGFGDND 286

Query: 414 VSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEP 473
            S K+L P+ ++ L    + Q+S G  H+V +T  GR+F FG  +  +LG+       +P
Sbjct: 287 KSSKML-PQKVNLLAGEDIIQVSCGGTHSVALTRDGRIFSFGRGDHGRLGYGRKVTTGQP 345

Query: 474 TEIFI 478
            E+ I
Sbjct: 346 LELPI 350


>gi|310825568|ref|YP_003957926.1| bnr repeat domain-containing protein [Stigmatella aurantiaca
           DW4/3-1]
 gi|309398640|gb|ADO76099.1| BNR repeat domain protein [Stigmatella aurantiaca DW4/3-1]
          Length = 482

 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 102/347 (29%), Positives = 161/347 (46%), Gaps = 26/347 (7%)

Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 179
           +Y   L ++ +V++CGS+  G LG+G  TT   S  R   P  +  V V+A  +HA  + 
Sbjct: 133 QYSLALHADGTVWACGSNSAGQLGNG--TTAARSAPR-PVPGLSRAVAVAAGGSHALALC 189

Query: 180 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 239
             G V+  G+N     G+  T      P  V  L+GV    V  G   +  L   G V  
Sbjct: 190 ADGTVWAWGNNGYGQLGNGSTAHRA-TPVQVPGLQGV--VAVAGGYMHSLALCADGTVWA 246

Query: 240 CGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNF 299
            G N +GQLG+G T+  PTP    P+  +  VV +AAG  + LA+  +G V+++G+    
Sbjct: 247 WGFNDYGQLGNGTTVHSPTP---VPVPGLSQVVSVAAGGFHSLALCADGTVWAWGNNGFG 303

Query: 300 CLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGD 359
            LG        +P  ++  R     VV V+ G  H +A+ + G +++WG  Y G LG+G 
Sbjct: 304 QLGEAVSTQRTKPGRVEGLR----EVVAVAGGFYHSLAVRAGGSLWSWGNNYSGQLGNGS 359

Query: 360 EIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLG---FPDRGVSD 416
                 P P+  L +     V A    +  +   G+V+ +G    G LG    P+R    
Sbjct: 360 FSSSARPAPVQGLGA--VTSVAAGGMHSVAVQADGTVWAWGRNEEGQLGHERAPERATPV 417

Query: 417 KVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 463
           +V  P +   +       ++ G YH++ V   G L+ +G N+  QLG
Sbjct: 418 RV--PGLQGEV------AVAAGFYHSLSVQAGGSLWAWGLNDFGQLG 456



 Score =  115 bits (289), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 82/258 (31%), Positives = 126/258 (48%), Gaps = 14/258 (5%)

Query: 219 KQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGP 278
           + V  G  ++  L   G V  CGSN+ GQLG+G T  R  P+   P+  +   V +AAG 
Sbjct: 126 RAVAGGYQYSLALHADGTVWACGSNSAGQLGNGTTAARSAPR---PVPGLSRAVAVAAGG 182

Query: 279 SYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
           S+ LA+  +G V+++G+     LG+G       P  +Q    +G  VV V+ G  H +AL
Sbjct: 183 SHALALCADGTVWAWGNNGYGQLGNGSTAHRATP--VQVPGLQG--VVAVAGGYMHSLAL 238

Query: 339 DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYG 398
            + G V+ WG    G LG+G  +    P P+  L     V V A    +  L   G+V+ 
Sbjct: 239 CADGTVWAWGFNDYGQLGNGTTVHSPTPVPVPGLSQ--VVSVAAGGFHSLALCADGTVWA 296

Query: 399 FGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNE 458
           +G  GFG LG     VS +  +P  ++ LR   V  ++ G YH++ V   G L+ +G+N 
Sbjct: 297 WGNNGFGQLG---EAVSTQRTKPGRVEGLR--EVVAVAGGFYHSLAVRAGGSLWSWGNNY 351

Query: 459 RAQLGHDTLRGCLEPTEI 476
             QLG+ +      P  +
Sbjct: 352 SGQLGNGSFSSSARPAPV 369



 Score = 98.6 bits (244), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 91/312 (29%), Positives = 139/312 (44%), Gaps = 29/312 (9%)

Query: 182 GQVFTCGDNSSFCCGH-----RDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
           G V+ CG NS+   G+     R   RP+  P L  A+       V AG +    L   G 
Sbjct: 142 GTVWACGSNSAGQLGNGTTAARSAPRPV--PGLSRAVA------VAAGGSHALALCADGT 193

Query: 237 VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 296
           V   G+N +GQLG+G T  R TP  +  L+    VV +A G  + LA+  +G V+++G  
Sbjct: 194 VWAWGNNGYGQLGNGSTAHRATPVQVPGLQ---GVVAVAGGYMHSLALCADGTVWAWGFN 250

Query: 297 SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 356
               LG+G       P  +    +    VV V+AG  H +AL + G V+ WG    G LG
Sbjct: 251 DYGQLGNGTTVHSPTPVPVPGLSQ----VVSVAAGGFHSLALCADGTVWAWGNNGFGQLG 306

Query: 357 HGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSD 416
                 +T P  +  L+    V V      +  +   GS++ +G    G LG    G   
Sbjct: 307 EAVSTQRTKPGRVEGLRE--VVAVAGGFYHSLAVRAGGSLWSWGNNYSGQLG---NGSFS 361

Query: 417 KVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 476
              RP  +  L A  V+ ++ G  H+V V   G ++ +G NE  QLGH+  R     T +
Sbjct: 362 SSARPAPVQGLGA--VTSVAAGGMHSVAVQADGTVWAWGRNEEGQLGHE--RAPERATPV 417

Query: 477 FIQEMEEDTGLA 488
            +  ++ +  +A
Sbjct: 418 RVPGLQGEVAVA 429



 Score = 79.0 bits (193), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 80/277 (28%), Positives = 127/277 (45%), Gaps = 24/277 (8%)

Query: 99  SVEHSSDIVETSA--GNMQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFT 155
           S  H +  V+     G + +  G  H+L L ++ +V++ G +  G LG+G   T   S T
Sbjct: 209 STAHRATPVQVPGLQGVVAVAGGYMHSLALCADGTVWAWGFNDYGQLGNG---TTVHSPT 265

Query: 156 RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHR-DTNRPIFRPRLVEALK 214
            +  P  + VV V+A   H+  +   G V+  G+N     G    T R   +P  VE L+
Sbjct: 266 PVPVPGLSQVVSVAAGGFHSLALCADGTVWAWGNNGFGQLGEAVSTQR--TKPGRVEGLR 323

Query: 215 GVPCKQVTAGLNFTGFLTIR--GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV 272
            V    V     F   L +R  G + + G+N  GQLG+G       P   AP++ +G+V 
Sbjct: 324 EV----VAVAGGFYHSLAVRAGGSLWSWGNNYSGQLGNGSFSSSARP---APVQGLGAVT 376

Query: 273 QIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH-VVRVSAG 331
            +AAG  + +AV  +G V+++G      LGH     E  P      R  G+   V V+AG
Sbjct: 377 SVAAGGMHSVAVQADGTVWAWGRNEEGQLGH-----ERAPERATPVRVPGLQGEVAVAAG 431

Query: 332 DEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEP 368
             H +++ + G ++ WG    G LG  +     +P P
Sbjct: 432 FYHSLSVQAGGSLWAWGLNDFGQLGDSEAPLMPVPAP 468


>gi|222619121|gb|EEE55253.1| hypothetical protein OsJ_03147 [Oryza sativa Japonica Group]
          Length = 954

 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 92/322 (28%), Positives = 147/322 (45%), Gaps = 20/322 (6%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V Q++    H A   + G+VFT G+      GH  T+  I RP+LVE+L       ++ G
Sbjct: 258 VNQIACGTRHVALTTRQGEVFTWGEEFGGRLGH-GTDADISRPKLVESLSLTVVDLISCG 316

Query: 225 LNFTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSYM 281
              T  +T  G +   G  ++  G LG G  +    PK ++ PLE +  V+ +A G  + 
Sbjct: 317 EFHTCAVTTSGDLFNWGDGSYNVGLLGCGTEVSYWLPKKVSGPLEGL-QVLSVACGSWHS 375

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS- 340
              T +G +Y+FG G+   LGHG++     P+ ++     G   ++V+ G  H  A+   
Sbjct: 376 ALTTSSGKLYTFGDGTFGVLGHGDRETLAYPKEVEAL--SGFKTIKVACGIWHSAAIVEV 433

Query: 341 ---------SGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 391
                    S  +YTWG G    LGHGD+  + +P+ + +L  +   Q+      T  L 
Sbjct: 434 TNQTGANVMSKKLYTWGDGDKNRLGHGDKEPRLVPKCVQALLEYNFHQLACGHNMTVALA 493

Query: 392 DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRL 451
            +G V+  G    G LG P        L   + D L +  V +IS G  H  V+T R  +
Sbjct: 494 TSGRVFTMGSSSNGQLGNPKSDGKQPCL---VQDRLASELVEEISCGASHVTVLTSRSEV 550

Query: 452 FGFGDNERAQLGHDTLRGCLEP 473
           + +G     +LGH  L+   +P
Sbjct: 551 YTWGMGANGRLGHGDLKDRKKP 572



 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 89/272 (32%), Positives = 132/272 (48%), Gaps = 19/272 (6%)

Query: 116 ITTGRYHTLLISNS-SVFSCG--SSLCGVLGHGPETTQCVSFTRINFP-SAAHVVQVSAS 171
           I+ G +HT  ++ S  +F+ G  S   G+LG G E +  +   +++ P     V+ V+  
Sbjct: 313 ISCGEFHTCAVTTSGDLFNWGDGSYNVGLLGCGTEVSYWLP-KKVSGPLEGLQVLSVACG 371

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL------ 225
             H+A    SG+++T GD +    GH D     + P+ VEAL G    +V  G+      
Sbjct: 372 SWHSALTTSSGKLYTFGDGTFGVLGHGDRETLAY-PKEVEALSGFKTIKVACGIWHSAAI 430

Query: 226 ----NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 281
               N TG   +   ++T G     +LGHGD   R  PK +  L E  +  Q+A G +  
Sbjct: 431 VEVTNQTGANVMSKKLYTWGDGDKNRLGHGDKEPRLVPKCVQALLEY-NFHQLACGHNMT 489

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 341
           +A+  +G V++ GS SN  LG+  + D  QP  +Q  R     V  +S G  HV  L S 
Sbjct: 490 VALATSGRVFTMGSSSNGQLGN-PKSDGKQPCLVQD-RLASELVEEISCGASHVTVLTSR 547

Query: 342 GYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
             VYTWG G  G LGHGD  D+  P  + +LK
Sbjct: 548 SEVYTWGMGANGRLGHGDLKDRKKPCLVEALK 579



 Score = 99.4 bits (246), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 100/354 (28%), Positives = 147/354 (41%), Gaps = 40/354 (11%)

Query: 115 QITTGRYHTLLISNS-SVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHVV 166
           QI  G  H  L +    VF+ G    G LGHG       P+  + +S T ++        
Sbjct: 260 QIACGTRHVALTTRQGEVFTWGEEFGGRLGHGTDADISRPKLVESLSLTVVDL------- 312

Query: 167 QVSASENHAAFVLQSGQVFTCGDNSS----FCCGHRDTNRPIFRPRLVEA-LKGVPCKQV 221
            +S  E H   V  SG +F  GD S       CG   T    + P+ V   L+G+    V
Sbjct: 313 -ISCGEFHTCAVTTSGDLFNWGDGSYNVGLLGCG---TEVSYWLPKKVSGPLEGLQVLSV 368

Query: 222 TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 281
             G   +   T  G ++T G  T G LGHGD      PK +  L      +++A G  + 
Sbjct: 369 ACGSWHSALTTSSGKLYTFGDGTFGVLGHGDRETLAYPKEVEALSGF-KTIKVACGIWHS 427

Query: 282 LAV------TGNGVV----YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG 331
            A+      TG  V+    Y++G G    LGHG++   L P+ +Q       H  +++ G
Sbjct: 428 AAIVEVTNQTGANVMSKKLYTWGDGDKNRLGHGDKEPRLVPKCVQALLEYNFH--QLACG 485

Query: 332 DEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 391
               VAL +SG V+T G    G LG+     K        L S L  ++        VL 
Sbjct: 486 HNMTVALATSGRVFTMGSSSNGQLGNPKSDGKQPCLVQDRLASELVEEISCGASHVTVLT 545

Query: 392 DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVV 445
               VY +G    G LG  D  + D+  +P ++++L+  HV  IS G   T  +
Sbjct: 546 SRSEVYTWGMGANGRLGHGD--LKDRK-KPCLVEALKDRHVKSISCGSNFTTCI 596



 Score = 88.2 bits (217), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 78/292 (26%), Positives = 130/292 (44%), Gaps = 14/292 (4%)

Query: 204 IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 263
           +  P+ +E+   +   Q+  G       T +G V T G    G+LGHG   D   PK + 
Sbjct: 244 VLIPKPLESDVVLDVNQIACGTRHVALTTRQGEVFTWGEEFGGRLGHGTDADISRPKLVE 303

Query: 264 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC--LGHGEQHDELQPRAIQTFRRK 321
            L  +  V  I+ G  +  AVT +G ++++G GS     LG G +     P+ + +   +
Sbjct: 304 SL-SLTVVDLISCGEFHTCAVTTSGDLFNWGDGSYNVGLLGCGTEVSYWLPKKV-SGPLE 361

Query: 322 GIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVC 381
           G+ V+ V+ G  H     SSG +YT+G G  G LGHGD      P+ + +L     ++V 
Sbjct: 362 GLQVLSVACGSWHSALTTSSGKLYTFGDGTFGVLGHGDRETLAYPKEVEALSGFKTIKVA 421

Query: 382 ARKRKTFVLVDTGSVYGFGWM-------GFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQ 434
                +  +V+  +  G   M       G G       G  +  L P+ + +L  ++  Q
Sbjct: 422 CGIWHSAAIVEVTNQTGANVMSKKLYTWGDGDKNRLGHGDKEPRLVPKCVQALLEYNFHQ 481

Query: 435 ISTGLYHTVVVTDRGRLFGFGDNERAQLGH---DTLRGCLEPTEIFIQEMEE 483
           ++ G   TV +   GR+F  G +   QLG+   D  + CL    +  + +EE
Sbjct: 482 LACGHNMTVALATSGRVFTMGSSSNGQLGNPKSDGKQPCLVQDRLASELVEE 533



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 50/201 (24%), Positives = 88/201 (43%), Gaps = 8/201 (3%)

Query: 277 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVV 336
           G  Y+       V  S G  S+ C     + D L P+ +++     + V +++ G  HV 
Sbjct: 216 GDVYVWGEVWTDVTPSDGHTSSSC----SKVDVLIPKPLES--DVVLDVNQIACGTRHVA 269

Query: 337 ALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSV 396
                G V+TWG+ + G LGHG + D + P+ + SL   +   +   +  T  +  +G +
Sbjct: 270 LTTRQGEVFTWGEEFGGRLGHGTDADISRPKLVESLSLTVVDLISCGEFHTCAVTTSGDL 329

Query: 397 YGFGWMGFGSLGFPDRGVSDKVLRPRILD-SLRAHHVSQISTGLYHTVVVTDRGRLFGFG 455
           + +G  G  ++G    G       P+ +   L    V  ++ G +H+ + T  G+L+ FG
Sbjct: 330 FNWG-DGSYNVGLLGCGTEVSYWLPKKVSGPLEGLQVLSVACGSWHSALTTSSGKLYTFG 388

Query: 456 DNERAQLGHDTLRGCLEPTEI 476
           D     LGH        P E+
Sbjct: 389 DGTFGVLGHGDRETLAYPKEV 409


>gi|218782845|ref|YP_002434163.1| chromosome condensation regulator RCC1 [Desulfatibacillum
           alkenivorans AK-01]
 gi|218764229|gb|ACL06695.1| regulator of chromosome condensation RCC1 [Desulfatibacillum
           alkenivorans AK-01]
          Length = 437

 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 93/303 (30%), Positives = 138/303 (45%), Gaps = 16/303 (5%)

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCK---QVTAGLNFTGF 230
           H+  V   G V+  GDNSS   G   TN+    P  V    G P     +V AG   +  
Sbjct: 66  HSLVVKNDGTVWAWGDNSSGQLG-IGTNKASLSPVRVMHKSGAPLNGVLKVAAGERHSLA 124

Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSI-----APLEEVGSVVQIAAGPSYMLAVT 285
           LT +G V T G N+ GQLG G   +R +P  +      PLE   ++V  A G  + LAV 
Sbjct: 125 LTAKGEVWTWGDNSKGQLGDGFFYERRSPVKVRHIRTNPLE---NIVGAACGGKHSLAVA 181

Query: 286 GNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVY 345
            +G V+++GS S+  +G G   +   PR +  F +    V  V+AG  H +AL   G V+
Sbjct: 182 SDGTVWAWGSNSDGQIGDGTLKNRQNPRQVMRFGKPLAGVKAVAAGFAHSLALSVDGTVW 241

Query: 346 TWGKGYCGALGHGDEIDKTLP-EPLSSLKSHL--AVQVCARKRKTFVLVDTGSVYGFGWM 402
            WG    G LG   + D+  P + + S+   L   V + A +  +  L   G V+ +G  
Sbjct: 242 AWGDNEFGQLGDCSDYDRKAPVQVMHSVDRPLDNVVAIAAGRAFSLALTRDGEVWAWGNN 301

Query: 403 GFGSLGF-PDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQ 461
           G G LG  P  G     L  R  + +    V  I+    H++ + + G +  +G  +R Q
Sbjct: 302 GVGQLGMGPHNGFVRDPLPVRAANGVPLKGVRAITANGRHSLALMNDGSVLAWGAGDRGQ 361

Query: 462 LGH 464
           LG 
Sbjct: 362 LGQ 364



 Score =  115 bits (287), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 105/367 (28%), Positives = 172/367 (46%), Gaps = 39/367 (10%)

Query: 119 GRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAH---VVQVSASENH 174
           G YH+L++ N  +V++ G +  G LG G      +S  R+   S A    V++V+A E H
Sbjct: 63  GGYHSLVVKNDGTVWAWGDNSSGQLGIG-TNKASLSPVRVMHKSGAPLNGVLKVAAGERH 121

Query: 175 AAFVLQSGQVFTCGDNSSFCCGH---RDTNRPI----FRPRLVEALKGVPCKQVTAGLNF 227
           +  +   G+V+T GDNS    G     +   P+     R   +E + G  C     G   
Sbjct: 122 SLALTAKGEVWTWGDNSKGQLGDGFFYERRSPVKVRHIRTNPLENIVGAAC-----GGKH 176

Query: 228 TGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL-EEVGSVVQIAAGPSYMLAVTG 286
           +  +   G V   GSN+ GQ+G G   +R  P+ +    + +  V  +AAG ++ LA++ 
Sbjct: 177 SLAVASDGTVWAWGSNSDGQIGDGTLKNRQNPRQVMRFGKPLAGVKAVAAGFAHSLALSV 236

Query: 287 NGVVYSFGSGSNFCLGHGEQHDELQP-RAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVY 345
           +G V+++G      LG    +D   P + + +  R   +VV ++AG    +AL   G V+
Sbjct: 237 DGTVWAWGDNEFGQLGDCSDYDRKAPVQVMHSVDRPLDNVVAIAAGRAFSLALTRDGEVW 296

Query: 346 TWGKGYCGALGHGDE---IDKTLPE------PLSSLKSHLAVQVCARKRKTFVLVDTGSV 396
            WG    G LG G     +   LP       PL  +++     + A  R +  L++ GSV
Sbjct: 297 AWGNNGVGQLGMGPHNGFVRDPLPVRAANGVPLKGVRA-----ITANGRHSLALMNDGSV 351

Query: 397 YGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGD 456
             +G    G LG   +G  +    P  L SL  H V  ++ G YH++ V + G +  +GD
Sbjct: 352 LAWGAGDRGQLG---QGAQNHEDHP-TLASL--HSVICLAAGRYHSLAVAENGAVLAWGD 405

Query: 457 NERAQLG 463
           N++ QLG
Sbjct: 406 NQKGQLG 412



 Score = 68.6 bits (166), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 84/320 (26%), Positives = 123/320 (38%), Gaps = 69/320 (21%)

Query: 112 GNMQITTGRYHTL-LISNSSVFSCGSSLCGVLGHG--PETTQCVSFTRINFPSAAHVVQV 168
           G +++  G  H+L L +   V++ G +  G LG G   E    V    I      ++V  
Sbjct: 111 GVLKVAAGERHSLALTAKGEVWTWGDNSKGQLGDGFFYERRSPVKVRHIRTNPLENIVGA 170

Query: 169 SASENHAAFVLQSGQVFTCGDNSSFCCGH---RDTNRPIFRPRLVEALKGVPCKQVTAGL 225
           +    H+  V   G V+  G NS    G    ++   P    R  + L GV  K V AG 
Sbjct: 171 ACGGKHSLAVASDGTVWAWGSNSDGQIGDGTLKNRQNPRQVMRFGKPLAGV--KAVAAGF 228

Query: 226 NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA-----PLEEVGSVVQIAAGPSY 280
             +  L++ G V   G N  GQLG     DR  P  +      PL+   +VV IAAG ++
Sbjct: 229 AHSLALSVDGTVWAWGDNEFGQLGDCSDYDRKAPVQVMHSVDRPLD---NVVAIAAGRAF 285

Query: 281 MLAVTGNGVVYSFGSGSNFCLGHGEQH----DELQPRAIQTFRRKGIH------------ 324
            LA+T +G V+++G+     LG G  +    D L  RA      KG+             
Sbjct: 286 SLALTRDGEVWAWGNNGVGQLGMGPHNGFVRDPLPVRAANGVPLKGVRAITANGRHSLAL 345

Query: 325 -----------------------------------VVRVSAGDEHVVALDSSGYVYTWGK 349
                                              V+ ++AG  H +A+  +G V  WG 
Sbjct: 346 MNDGSVLAWGAGDRGQLGQGAQNHEDHPTLASLHSVICLAAGRYHSLAVAENGAVLAWGD 405

Query: 350 GYCGALGHG--DEIDKTLPE 367
              G LG G  D+    LPE
Sbjct: 406 NQKGQLGIGKADKNFHALPE 425



 Score = 55.8 bits (133), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 67/238 (28%), Positives = 101/238 (42%), Gaps = 38/238 (15%)

Query: 82  LLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLIS-NSSVFSCGSSLCG 140
           L NR N   ++V+RF + +          AG   +  G  H+L +S + +V++ G +  G
Sbjct: 202 LKNRQNP--RQVMRFGKPL----------AGVKAVAAGFAHSLALSVDGTVWAWGDNEFG 249

Query: 141 VLGHGPETTQCVSFTRINFPSAAH--------VVQVSASENHAAFVLQSGQVFTCGDNSS 192
            LG       C  + R       H        VV ++A    +  + + G+V+  G+N  
Sbjct: 250 QLG------DCSDYDRKAPVQVMHSVDRPLDNVVAIAAGRAFSLALTRDGEVWAWGNNGV 303

Query: 193 FCCGHRDTNRPIFRPRLVEALKGVPCK---QVTAGLNFTGFLTIRGHVHTCGSNTHGQLG 249
              G    N  +  P  V A  GVP K    +TA    +  L   G V   G+   GQLG
Sbjct: 304 GQLGMGPHNGFVRDPLPVRAANGVPLKGVRAITANGRHSLALMNDGSVLAWGAGDRGQLG 363

Query: 250 HG--DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGE 305
            G  +  D PT      L  + SV+ +AAG  + LAV  NG V ++G      LG G+
Sbjct: 364 QGAQNHEDHPT------LASLHSVICLAAGRYHSLAVAENGAVLAWGDNQKGQLGIGK 415



 Score = 47.0 bits (110), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 46/182 (25%), Positives = 76/182 (41%), Gaps = 20/182 (10%)

Query: 311 QPRAIQTFR-----RKGIHVVR--VSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK 363
           QPR  +  R     R   H V    + G  H + + + G V+ WG    G LG G   +K
Sbjct: 36  QPRPSEEARTSARHRNAPHPVWGIAAGGGYHSLVVKNDGTVWAWGDNSSGQLGIG--TNK 93

Query: 364 TLPEPLSSLKSHLA-----VQVCARKRKTFVLVDTGSVYGFGWMGFGSLG---FPDRGVS 415
               P+  +    A     ++V A +R +  L   G V+ +G    G LG   F +R   
Sbjct: 94  ASLSPVRVMHKSGAPLNGVLKVAAGERHSLALTAKGEVWTWGDNSKGQLGDGFFYERRSP 153

Query: 416 DKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTE 475
            KV   R + +    ++   + G  H++ V   G ++ +G N   Q+G  TL+    P +
Sbjct: 154 VKV---RHIRTNPLENIVGAACGGKHSLAVASDGTVWAWGSNSDGQIGDGTLKNRQNPRQ 210

Query: 476 IF 477
           + 
Sbjct: 211 VM 212


>gi|301115610|ref|XP_002905534.1| regulator of chromosome condensation (RCC1)-like protein
           [Phytophthora infestans T30-4]
 gi|262110323|gb|EEY68375.1| regulator of chromosome condensation (RCC1)-like protein
           [Phytophthora infestans T30-4]
          Length = 456

 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 86/298 (28%), Positives = 142/298 (47%), Gaps = 20/298 (6%)

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFR-------PRLVEALKGVPCKQVTAGLNF 227
           A++  QS  V+T G+ +    GH    +   R       P+L EAL+G     V  G + 
Sbjct: 63  ASYATQS-SVYTWGNGTLGQLGHGSVIKSGIRSAYEELTPKLTEALEGKAITHVEFGASH 121

Query: 228 TGFLTIRGHVHTCGSNTHGQLGHGDTLDRPT-PKSIAPLEEVGSVVQIAAGPSYMLAVTG 286
           +  +   G ++  GSN + +LG G++ +  T P+ +  L+ +  +V ++ G  +  AV  
Sbjct: 122 SAAIDEEGKLYVWGSNEYSKLGLGESSEMETLPREVEALKGI-KIVDVSCGDYFTAAVDE 180

Query: 287 NGVVYSFGSGSN-----FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 341
           +G +YS+G G +       LGH    DE  PR + T   +G+ +  V  G+ H VAL   
Sbjct: 181 DGKMYSWGWGGSTMKGAGGLGHAGGKDEPTPRLLTTLVDQGVPIATVECGEFHTVALTKD 240

Query: 342 GYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGW 401
           G ++ WG G  G LG+G+     +PEP+        V + A +  +F L D G +Y +G 
Sbjct: 241 GEIWAWGNGEYGRLGNGESDTCEVPEPIEFFSKDNVVSIAAGRDFSFALTDKGELYSWGG 300

Query: 402 MGFGSLGFPDRGVSDKVLR----PRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFG 455
                LG    G++  V      P ++++     V QI+ G  H   VT+ GRL+ +G
Sbjct: 301 NSQNQLGIGG-GLAMDVYNIESIPVLVEAFNGLLVKQIAAGYDHAAAVTEDGRLYMWG 357



 Score =  109 bits (272), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 93/377 (24%), Positives = 167/377 (44%), Gaps = 51/377 (13%)

Query: 127 SNSSVFSCGSSLCGVLGHG---------------PETTQCVSFTRINFPSAAHVVQVSAS 171
           + SSV++ G+   G LGHG               P+ T+ +            +  V   
Sbjct: 67  TQSSVYTWGNGTLGQLGHGSVIKSGIRSAYEELTPKLTEALE--------GKAITHVEFG 118

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
            +H+A + + G+++  G N     G  +++     PR VEALKG+    V+ G  FT  +
Sbjct: 119 ASHSAAIDEEGKLYVWGSNEYSKLGLGESSEMETLPREVEALKGIKIVDVSCGDYFTAAV 178

Query: 232 TIRGHVHTCG-----SNTHGQLGHGDTLDRPTPKSIAPLEEVG-SVVQIAAGPSYMLAVT 285
              G +++ G         G LGH    D PTP+ +  L + G  +  +  G  + +A+T
Sbjct: 179 DEDGKMYSWGWGGSTMKGAGGLGHAGGKDEPTPRLLTTLVDQGVPIATVECGEFHTVALT 238

Query: 286 GNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVY 345
            +G ++++G+G    LG+GE      P  I+ F +   +VV ++AG +   AL   G +Y
Sbjct: 239 KDGEIWAWGNGEYGRLGNGESDTCEVPEPIEFFSKD--NVVSIAAGRDFSFALTDKGELY 296

Query: 346 TWGKGYCGALGHGDEID------KTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGF 399
           +WG      LG G  +       +++P  + +    L  Q+ A       + + G +Y +
Sbjct: 297 SWGGNSQNQLGIGGGLAMDVYNIESIPVLVEAFNGLLVKQIAAGYDHAAAVTEDGRLYMW 356

Query: 400 GWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNER 459
           G              +   + P  + ++  H ++Q++ G  +TV +TD G++F FG    
Sbjct: 357 G--------------AKIWIEPHEMTAVNEHKMTQVACGRQYTVGLTDDGKVFTFGKGSS 402

Query: 460 AQLGHDTLRGCLEPTEI 476
             LGH   +  L+P +I
Sbjct: 403 NCLGHGDRKNQLQPVKI 419



 Score = 95.1 bits (235), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 66/229 (28%), Positives = 113/229 (49%), Gaps = 21/229 (9%)

Query: 116 ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           +  G +HT+ L  +  +++ G+   G LG+G E+  C     I F S  +VV ++A  + 
Sbjct: 227 VECGEFHTVALTKDGEIWAWGNGEYGRLGNG-ESDTCEVPEPIEFFSKDNVVSIAAGRDF 285

Query: 175 AAFVLQSGQVFTCGDNSSFCCG-----HRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
           +  +   G++++ G NS    G       D       P LVEA  G+  KQ+ AG +   
Sbjct: 286 SFALTDKGELYSWGGNSQNQLGIGGGLAMDVYNIESIPVLVEAFNGLLVKQIAAGYDHAA 345

Query: 230 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 289
            +T  G ++  G+    +           P  +  + E   + Q+A G  Y + +T +G 
Sbjct: 346 AVTEDGRLYMWGAKIWIE-----------PHEMTAVNE-HKMTQVACGRQYTVGLTDDGK 393

Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
           V++FG GS+ CLGHG++ ++LQP  IQ     G+++  VS GD H+ A+
Sbjct: 394 VFTFGKGSSNCLGHGDRKNQLQPVKIQAL--AGVNITSVSCGDYHMGAI 440



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 94/341 (27%), Positives = 149/341 (43%), Gaps = 40/341 (11%)

Query: 119 GRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSASENHAA 176
           G  H+  I     ++  GS+    LG G E+++  +  R +       +V VS  +   A
Sbjct: 118 GASHSAAIDEEGKLYVWGSNEYSKLGLG-ESSEMETLPREVEALKGIKIVDVSCGDYFTA 176

Query: 177 FVLQSGQVFTCGDNSSFCCGHRDTNRPIFR----PRLVEAL--KGVPCKQVTAGLNFTGF 230
            V + G++++ G   S   G         +    PRL+  L  +GVP   V  G   T  
Sbjct: 177 AVDEDGKMYSWGWGGSTMKGAGGLGHAGGKDEPTPRLLTTLVDQGVPIATVECGEFHTVA 236

Query: 231 LTIRGHVHTCGSNTHGQLGHG--DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG 288
           LT  G +   G+  +G+LG+G  DT + P P      +   +VV IAAG  +  A+T  G
Sbjct: 237 LTKDGEIWAWGNGEYGRLGNGESDTCEVPEPIEFFSKD---NVVSIAAGRDFSFALTDKG 293

Query: 289 VVYSFGSGSNFCLGHGE------QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
            +YS+G  S   LG G        + E  P  ++ F   G+ V +++AG +H  A+   G
Sbjct: 294 ELYSWGGNSQNQLGIGGGLAMDVYNIESIPVLVEAFN--GLLVKQIAAGYDHAAAVTEDG 351

Query: 343 YVYTWGKGYCGALGHGDEIDKTLPEP--LSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 400
            +Y WG              K   EP  ++++  H   QV   ++ T  L D G V+ FG
Sbjct: 352 RLYMWGA-------------KIWIEPHEMTAVNEHKMTQVACGRQYTVGLTDDGKVFTFG 398

Query: 401 WMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYH 441
                 LG  DR      L+P  + +L   +++ +S G YH
Sbjct: 399 KGSSNCLGHGDR---KNQLQPVKIQALAGVNITSVSCGDYH 436


>gi|115374127|ref|ZP_01461415.1| BNR repeat domain protein [Stigmatella aurantiaca DW4/3-1]
 gi|115368903|gb|EAU67850.1| BNR repeat domain protein [Stigmatella aurantiaca DW4/3-1]
          Length = 479

 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 102/347 (29%), Positives = 161/347 (46%), Gaps = 26/347 (7%)

Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 179
           +Y   L ++ +V++CGS+  G LG+G  TT   S  R   P  +  V V+A  +HA  + 
Sbjct: 130 QYSLALHADGTVWACGSNSAGQLGNG--TTAARSAPR-PVPGLSRAVAVAAGGSHALALC 186

Query: 180 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 239
             G V+  G+N     G+  T      P  V  L+GV    V  G   +  L   G V  
Sbjct: 187 ADGTVWAWGNNGYGQLGNGSTAH-RATPVQVPGLQGV--VAVAGGYMHSLALCADGTVWA 243

Query: 240 CGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNF 299
            G N +GQLG+G T+  PTP    P+  +  VV +AAG  + LA+  +G V+++G+    
Sbjct: 244 WGFNDYGQLGNGTTVHSPTP---VPVPGLSQVVSVAAGGFHSLALCADGTVWAWGNNGFG 300

Query: 300 CLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGD 359
            LG        +P  ++  R     VV V+ G  H +A+ + G +++WG  Y G LG+G 
Sbjct: 301 QLGEAVSTQRTKPGRVEGLR----EVVAVAGGFYHSLAVRAGGSLWSWGNNYSGQLGNGS 356

Query: 360 EIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLG---FPDRGVSD 416
                 P P+  L +     V A    +  +   G+V+ +G    G LG    P+R    
Sbjct: 357 FSSSARPAPVQGLGA--VTSVAAGGMHSVAVQADGTVWAWGRNEEGQLGHERAPERATPV 414

Query: 417 KVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 463
           +V  P +   +       ++ G YH++ V   G L+ +G N+  QLG
Sbjct: 415 RV--PGLQGEV------AVAAGFYHSLSVQAGGSLWAWGLNDFGQLG 453



 Score =  115 bits (288), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 82/258 (31%), Positives = 126/258 (48%), Gaps = 14/258 (5%)

Query: 219 KQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGP 278
           + V  G  ++  L   G V  CGSN+ GQLG+G T  R  P+   P+  +   V +AAG 
Sbjct: 123 RAVAGGYQYSLALHADGTVWACGSNSAGQLGNGTTAARSAPR---PVPGLSRAVAVAAGG 179

Query: 279 SYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
           S+ LA+  +G V+++G+     LG+G       P  +Q    +G  VV V+ G  H +AL
Sbjct: 180 SHALALCADGTVWAWGNNGYGQLGNGSTAHRATP--VQVPGLQG--VVAVAGGYMHSLAL 235

Query: 339 DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYG 398
            + G V+ WG    G LG+G  +    P P+  L     V V A    +  L   G+V+ 
Sbjct: 236 CADGTVWAWGFNDYGQLGNGTTVHSPTPVPVPGLSQ--VVSVAAGGFHSLALCADGTVWA 293

Query: 399 FGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNE 458
           +G  GFG LG     VS +  +P  ++ LR   V  ++ G YH++ V   G L+ +G+N 
Sbjct: 294 WGNNGFGQLG---EAVSTQRTKPGRVEGLR--EVVAVAGGFYHSLAVRAGGSLWSWGNNY 348

Query: 459 RAQLGHDTLRGCLEPTEI 476
             QLG+ +      P  +
Sbjct: 349 SGQLGNGSFSSSARPAPV 366



 Score = 98.2 bits (243), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 91/312 (29%), Positives = 139/312 (44%), Gaps = 29/312 (9%)

Query: 182 GQVFTCGDNSSFCCGH-----RDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
           G V+ CG NS+   G+     R   RP+  P L  A+       V AG +    L   G 
Sbjct: 139 GTVWACGSNSAGQLGNGTTAARSAPRPV--PGLSRAVA------VAAGGSHALALCADGT 190

Query: 237 VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 296
           V   G+N +GQLG+G T  R TP  +  L+    VV +A G  + LA+  +G V+++G  
Sbjct: 191 VWAWGNNGYGQLGNGSTAHRATPVQVPGLQ---GVVAVAGGYMHSLALCADGTVWAWGFN 247

Query: 297 SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 356
               LG+G       P  +    +    VV V+AG  H +AL + G V+ WG    G LG
Sbjct: 248 DYGQLGNGTTVHSPTPVPVPGLSQ----VVSVAAGGFHSLALCADGTVWAWGNNGFGQLG 303

Query: 357 HGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSD 416
                 +T P  +  L+    V V      +  +   GS++ +G    G LG    G   
Sbjct: 304 EAVSTQRTKPGRVEGLRE--VVAVAGGFYHSLAVRAGGSLWSWGNNYSGQLG---NGSFS 358

Query: 417 KVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 476
              RP  +  L A  V+ ++ G  H+V V   G ++ +G NE  QLGH+  R     T +
Sbjct: 359 SSARPAPVQGLGA--VTSVAAGGMHSVAVQADGTVWAWGRNEEGQLGHE--RAPERATPV 414

Query: 477 FIQEMEEDTGLA 488
            +  ++ +  +A
Sbjct: 415 RVPGLQGEVAVA 426



 Score = 79.0 bits (193), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 80/277 (28%), Positives = 127/277 (45%), Gaps = 24/277 (8%)

Query: 99  SVEHSSDIVETSA--GNMQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFT 155
           S  H +  V+     G + +  G  H+L L ++ +V++ G +  G LG+G   T   S T
Sbjct: 206 STAHRATPVQVPGLQGVVAVAGGYMHSLALCADGTVWAWGFNDYGQLGNG---TTVHSPT 262

Query: 156 RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHR-DTNRPIFRPRLVEALK 214
            +  P  + VV V+A   H+  +   G V+  G+N     G    T R   +P  VE L+
Sbjct: 263 PVPVPGLSQVVSVAAGGFHSLALCADGTVWAWGNNGFGQLGEAVSTQR--TKPGRVEGLR 320

Query: 215 GVPCKQVTAGLNFTGFLTIR--GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV 272
            V    V     F   L +R  G + + G+N  GQLG+G       P   AP++ +G+V 
Sbjct: 321 EV----VAVAGGFYHSLAVRAGGSLWSWGNNYSGQLGNGSFSSSARP---APVQGLGAVT 373

Query: 273 QIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH-VVRVSAG 331
            +AAG  + +AV  +G V+++G      LGH     E  P      R  G+   V V+AG
Sbjct: 374 SVAAGGMHSVAVQADGTVWAWGRNEEGQLGH-----ERAPERATPVRVPGLQGEVAVAAG 428

Query: 332 DEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEP 368
             H +++ + G ++ WG    G LG  +     +P P
Sbjct: 429 FYHSLSVQAGGSLWAWGLNDFGQLGDSEAPLMPVPAP 465


>gi|15229409|ref|NP_188968.1| regulator of chromosome condensation-like protein with FYVE zinc
           finger domain [Arabidopsis thaliana]
 gi|332643224|gb|AEE76745.1| regulator of chromosome condensation-like protein with FYVE zinc
           finger domain [Arabidopsis thaliana]
          Length = 1045

 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 97/323 (30%), Positives = 144/323 (44%), Gaps = 20/323 (6%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V Q+     H A V + G+VFT G+      GH      I RP+LVE L       V  G
Sbjct: 253 VHQIVCGVRHVALVTRQGEVFTWGEEVGGRLGH-GIQVDISRPKLVEFLALTNIDFVACG 311

Query: 225 LNFTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSYM 281
              T  ++  G + + G   H  G LGHG  +    PK ++ PLE +  V+ +A G  + 
Sbjct: 312 EYHTCVVSTSGDLFSWGDGIHNVGLLGHGSDISHWIPKRVSGPLEGL-QVLSVACGTWHS 370

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL--- 338
              T NG +++FG G+   LGHG +     P+ +Q+    G+  V+V+    H  A+   
Sbjct: 371 ALATANGKLFTFGDGAFGVLGHGNRESVSYPKEVQSL--NGLKTVKVACSIWHTAAIVEV 428

Query: 339 -------DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 391
                   SS  ++TWG G    LGHG++    LP  +SSL  +   ++      T  L 
Sbjct: 429 MGQTATSMSSRKLFTWGDGDKNRLGHGNKETYLLPTCVSSLIDYNFHKIACGHTFTVALT 488

Query: 392 DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRL 451
            +G V+  G    G LG     +SD  L   + D L    V +I+ G +H  V+T R  +
Sbjct: 489 TSGHVFTMGGTAHGQLG---NSISDGKLPCLVQDRLVGEFVEEIACGAHHVAVLTSRSEV 545

Query: 452 FGFGDNERAQLGHDTLRGCLEPT 474
           F +G     +LGH        PT
Sbjct: 546 FTWGKGANGRLGHGDTEDKRTPT 568



 Score = 91.7 bits (226), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 79/272 (29%), Positives = 133/272 (48%), Gaps = 19/272 (6%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSL--CGVLGHGPETTQCVSFTRINFP-SAAHVVQVSAS 171
           +  G YHT ++S S  +FS G  +   G+LGHG + +  +   R++ P     V+ V+  
Sbjct: 308 VACGEYHTCVVSTSGDLFSWGDGIHNVGLLGHGSDISHWIP-KRVSGPLEGLQVLSVACG 366

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG-F 230
             H+A    +G++FT GD +    GH +    +  P+ V++L G+   +V   +  T   
Sbjct: 367 TWHSALATANGKLFTFGDGAFGVLGHGN-RESVSYPKEVQSLNGLKTVKVACSIWHTAAI 425

Query: 231 LTIRGH---------VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 281
           + + G          + T G     +LGHG+      P  ++ L +  +  +IA G ++ 
Sbjct: 426 VEVMGQTATSMSSRKLFTWGDGDKNRLGHGNKETYLLPTCVSSLIDY-NFHKIACGHTFT 484

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 341
           +A+T +G V++ G  ++  LG+     +L P  +Q  R  G  V  ++ G  HV  L S 
Sbjct: 485 VALTTSGHVFTMGGTAHGQLGNSISDGKL-PCLVQD-RLVGEFVEEIACGAHHVAVLTSR 542

Query: 342 GYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
             V+TWGKG  G LGHGD  DK  P  + +L+
Sbjct: 543 SEVFTWGKGANGRLGHGDTEDKRTPTLVEALR 574



 Score = 85.5 bits (210), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 79/300 (26%), Positives = 132/300 (44%), Gaps = 13/300 (4%)

Query: 182 GQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCG 241
           G+V+T G        +      +  PR +E+   +   Q+  G+     +T +G V T G
Sbjct: 217 GEVWTEGILPDGTASNETVKTDVLTPRPLESNVVLDVHQIVCGVRHVALVTRQGEVFTWG 276

Query: 242 SNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC- 300
               G+LGHG  +D   PK +  L  + ++  +A G  +   V+ +G ++S+G G +   
Sbjct: 277 EEVGGRLGHGIQVDISRPKLVEFLA-LTNIDFVACGEYHTCVVSTSGDLFSWGDGIHNVG 335

Query: 301 -LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGD 359
            LGHG       P+ + +   +G+ V+ V+ G  H     ++G ++T+G G  G LGHG+
Sbjct: 336 LLGHGSDISHWIPKRV-SGPLEGLQVLSVACGTWHSALATANGKLFTFGDGAFGVLGHGN 394

Query: 360 EIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDT--------GSVYGFGWMGFGSLGFPD 411
               + P+ + SL     V+V      T  +V+          S   F W G G      
Sbjct: 395 RESVSYPKEVQSLNGLKTVKVACSIWHTAAIVEVMGQTATSMSSRKLFTW-GDGDKNRLG 453

Query: 412 RGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCL 471
            G  +  L P  + SL  ++  +I+ G   TV +T  G +F  G     QLG+    G L
Sbjct: 454 HGNKETYLLPTCVSSLIDYNFHKIACGHTFTVALTTSGHVFTMGGTAHGQLGNSISDGKL 513



 Score = 79.0 bits (193), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 88/345 (25%), Positives = 141/345 (40%), Gaps = 36/345 (10%)

Query: 115 QITTGRYHTLLISNS-SVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHVV 166
           QI  G  H  L++    VF+ G  + G LGHG       P+  + ++ T I+F       
Sbjct: 255 QIVCGVRHVALVTRQGEVFTWGEEVGGRLGHGIQVDISRPKLVEFLALTNIDF------- 307

Query: 167 QVSASENHAAFVLQSGQVFTCGD--NSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
            V+  E H   V  SG +F+ GD  ++    GH          R+   L+G+    V  G
Sbjct: 308 -VACGEYHTCVVSTSGDLFSWGDGIHNVGLLGHGSDISHWIPKRVSGPLEGLQVLSVACG 366

Query: 225 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 284
              +   T  G + T G    G LGHG+      PK +  L  +   V++A    +  A+
Sbjct: 367 TWHSALATANGKLFTFGDGAFGVLGHGNRESVSYPKEVQSLNGL-KTVKVACSIWHTAAI 425

Query: 285 T----------GNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEH 334
                       +  ++++G G    LGHG +   L P  + +      H  +++ G   
Sbjct: 426 VEVMGQTATSMSSRKLFTWGDGDKNRLGHGNKETYLLPTCVSSLIDYNFH--KIACGHTF 483

Query: 335 VVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSS-LKSHLAVQVCARKRKTFVLVDT 393
            VAL +SG+V+T G    G LG+    D  LP  +   L      ++        VL   
Sbjct: 484 TVALTTSGHVFTMGGTAHGQLGNSIS-DGKLPCLVQDRLVGEFVEEIACGAHHVAVLTSR 542

Query: 394 GSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTG 438
             V+ +G    G LG    G ++    P ++++LR  HV  +S G
Sbjct: 543 SEVFTWGKGANGRLG---HGDTEDKRTPTLVEALRDRHVKSLSCG 584



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 72/250 (28%), Positives = 115/250 (46%), Gaps = 24/250 (9%)

Query: 114 MQITTGRYHTLL-ISNSSVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSAS 171
           + +  G +H+ L  +N  +F+ G    GVLGHG    + VS+ + +   +    V+V+ S
Sbjct: 361 LSVACGTWHSALATANGKLFTFGDGAFGVLGHG--NRESVSYPKEVQSLNGLKTVKVACS 418

Query: 172 ENHAAFVLQ----------SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQV 221
             H A +++          S ++FT GD      GH +    +  P  V +L      ++
Sbjct: 419 IWHTAAIVEVMGQTATSMSSRKLFTWGDGDKNRLGHGNKETYLL-PTCVSSLIDYNFHKI 477

Query: 222 TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ-IAAGPSY 280
             G  FT  LT  GHV T G   HGQLG+  + D   P  +     VG  V+ IA G  +
Sbjct: 478 ACGHTFTVALTTSGHVFTMGGTAHGQLGNSIS-DGKLP-CLVQDRLVGEFVEEIACGAHH 535

Query: 281 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 340
           +  +T    V+++G G+N  LGHG+  D+  P  ++  R +  HV  +S G        S
Sbjct: 536 VAVLTSRSEVFTWGKGANGRLGHGDTEDKRTPTLVEALRDR--HVKSLSCGSN----FTS 589

Query: 341 SGYVYTWGKG 350
           S  ++ W  G
Sbjct: 590 SICIHKWVSG 599



 Score = 45.1 bits (105), Expect = 0.077,   Method: Compositional matrix adjust.
 Identities = 53/184 (28%), Positives = 81/184 (44%), Gaps = 27/184 (14%)

Query: 92  RVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETT-- 149
           + ++   S+ H++ IVE      Q  T       +S+  +F+ G      LGHG + T  
Sbjct: 411 KTVKVACSIWHTAAIVEVMG---QTATS------MSSRKLFTWGDGDKNRLGHGNKETYL 461

Query: 150 --QCVS-FTRINFPSAA--HVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPI 204
              CVS     NF   A  H   V+        +  SG VFT G  +    G+  ++  +
Sbjct: 462 LPTCVSSLIDYNFHKIACGHTFTVA--------LTTSGHVFTMGGTAHGQLGNSISDGKL 513

Query: 205 FRPRLVE-ALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 263
             P LV+  L G   +++  G +    LT R  V T G   +G+LGHGDT D+ TP  + 
Sbjct: 514 --PCLVQDRLVGEFVEEIACGAHHVAVLTSRSEVFTWGKGANGRLGHGDTEDKRTPTLVE 571

Query: 264 PLEE 267
            L +
Sbjct: 572 ALRD 575


>gi|408500851|ref|YP_006864770.1| RCC1 repeat-containing protein [Bifidobacterium asteroides PRL2011]
 gi|408465675|gb|AFU71204.1| RCC1 repeat-containing protein [Bifidobacterium asteroides PRL2011]
          Length = 1070

 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 107/408 (26%), Positives = 171/408 (41%), Gaps = 52/408 (12%)

Query: 115 QITTGRYHTLLIS-----NSSVFSCGSSLCGVLGHGPETTQCVSFTRI-----NFPSAAH 164
           Q+   +Y+T + S     +   ++ G +  G LG    TT   S   I       P+   
Sbjct: 560 QVGGAKYYTYVFSLAVGSDGKAYAWGDNTYGQLGDA--TTNSRSTPNIVRKPTGVPTDFT 617

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDN------------SSFCCGHRDTNRPIFRPRLVEA 212
            VQVSA + H+  +   G V+  G N            SS     RD   P       + 
Sbjct: 618 YVQVSAGKWHSLALGSDGYVYAWGSNQHGQLGNNTKTNSSVPVRVRDPANP------TDP 671

Query: 213 LKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSI----APLEEV 268
            KG+   QV+AG   +  L   G+V+  G N +G+LG+  T D   P  +    +P +  
Sbjct: 672 NKGLKAIQVSAGDEHSLALDSNGYVYAWGWNDNGRLGNNSTTDSSVPVRVRDPASPTDPS 731

Query: 269 G--SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFR-----RK 321
                VQ++AG  + LAV  +G  Y++G  +   LG+  ++    P  ++ F       K
Sbjct: 732 KGLKAVQVSAGWHHSLAVGSDGYTYAWGLNNYGQLGNSSKNSSSFPVRVRDFASPNDANK 791

Query: 322 GIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP-------EPLSSLKS 374
           G+  V+VSAG  H +A+ S GY Y WG    G LG+ + +D T+P        P  + K 
Sbjct: 792 GLKAVQVSAGYSHSLAVGSDGYTYAWGLNNYGQLGNSNTVDSTVPVRVRDPTSPKDASKG 851

Query: 375 HLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLG---FPDRGVSDKVLRP-RILDSLRAH 430
             A  + A    +  + + G  Y +GW  +  LG     +  V   V  P    D+ +  
Sbjct: 852 LKATAINAGGEHSLAVGNNGYAYAWGWNLYRQLGDGTTSNSSVPVPVRDPTSPADASKGL 911

Query: 431 HVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFI 478
             ++ S G +H++ V   G  + +G+N   QLG  T      P  +  
Sbjct: 912 QATRFSVGDHHSLAVGSNGYAYAWGENSYGQLGDGTTDDSNVPVSVLF 959



 Score = 99.4 bits (246), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 82/278 (29%), Positives = 126/278 (45%), Gaps = 26/278 (9%)

Query: 114 MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAA-------HV 165
           +Q++ G  H+L L SN  V++ G +  G LG+   T   V   R+  P++          
Sbjct: 678 IQVSAGDEHSLALDSNGYVYAWGWNDNGRLGNNSTTDSSVPV-RVRDPASPTDPSKGLKA 736

Query: 166 VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRL------VEALKGVPCK 219
           VQVSA  +H+  V   G  +  G N+    G+   N   F  R+       +A KG+   
Sbjct: 737 VQVSAGWHHSLAVGSDGYTYAWGLNNYGQLGNSSKNSSSFPVRVRDFASPNDANKGLKAV 796

Query: 220 QVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSI----APLEEVG--SVVQ 273
           QV+AG + +  +   G+ +  G N +GQLG+ +T+D   P  +    +P +         
Sbjct: 797 QVSAGYSHSLAVGSDGYTYAWGLNNYGQLGNSNTVDSTVPVRVRDPTSPKDASKGLKATA 856

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQ-----TFRRKGIHVVRV 328
           I AG  + LAV  NG  Y++G      LG G   +   P  ++         KG+   R 
Sbjct: 857 INAGGEHSLAVGNNGYAYAWGWNLYRQLGDGTTSNSSVPVPVRDPTSPADASKGLQATRF 916

Query: 329 SAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP 366
           S GD H +A+ S+GY Y WG+   G LG G   D  +P
Sbjct: 917 SVGDHHSLAVGSNGYAYAWGENSYGQLGDGTTDDSNVP 954



 Score = 95.1 bits (235), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 82/327 (25%), Positives = 144/327 (44%), Gaps = 33/327 (10%)

Query: 114 MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAA-------HV 165
           +Q++ G++H+L + S+  V++ GS+  G LG+  +T   V   R+  P+           
Sbjct: 619 VQVSAGKWHSLALGSDGYVYAWGSNQHGQLGNNTKTNSSVPV-RVRDPANPTDPNKGLKA 677

Query: 166 VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRL------VEALKGVPCK 219
           +QVSA + H+  +  +G V+  G N +   G+  T       R+       +  KG+   
Sbjct: 678 IQVSAGDEHSLALDSNGYVYAWGWNDNGRLGNNSTTDSSVPVRVRDPASPTDPSKGLKAV 737

Query: 220 QVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTP---KSIAPLEEVGS---VVQ 273
           QV+AG + +  +   G+ +  G N +GQLG+        P   +  A   +       VQ
Sbjct: 738 QVSAGWHHSLAVGSDGYTYAWGLNNYGQLGNSSKNSSSFPVRVRDFASPNDANKGLKAVQ 797

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQ-----TFRRKGIHVVRV 328
           ++AG S+ LAV  +G  Y++G  +   LG+    D   P  ++         KG+    +
Sbjct: 798 VSAGYSHSLAVGSDGYTYAWGLNNYGQLGNSNTVDSTVPVRVRDPTSPKDASKGLKATAI 857

Query: 329 SAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP-------EPLSSLKSHLAVQVC 381
           +AG EH +A+ ++GY Y WG      LG G   + ++P        P  + K   A +  
Sbjct: 858 NAGGEHSLAVGNNGYAYAWGWNLYRQLGDGTTSNSSVPVPVRDPTSPADASKGLQATRFS 917

Query: 382 ARKRKTFVLVDTGSVYGFGWMGFGSLG 408
                +  +   G  Y +G   +G LG
Sbjct: 918 VGDHHSLAVGSNGYAYAWGENSYGQLG 944



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 55/221 (24%), Positives = 95/221 (42%), Gaps = 19/221 (8%)

Query: 114 MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINF--PSAAH----VV 166
           +Q++ G +H+L + S+   ++ G +  G LG+  + +        +F  P+ A+     V
Sbjct: 737 VQVSAGWHHSLAVGSDGYTYAWGLNNYGQLGNSSKNSSSFPVRVRDFASPNDANKGLKAV 796

Query: 167 QVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRL------VEALKGVPCKQ 220
           QVSA  +H+  V   G  +  G N+    G+ +T       R+       +A KG+    
Sbjct: 797 QVSAGYSHSLAVGSDGYTYAWGLNNYGQLGNSNTVDSTVPVRVRDPTSPKDASKGLKATA 856

Query: 221 VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTP------KSIAPLEEVGSVVQI 274
           + AG   +  +   G+ +  G N + QLG G T +   P       S A   +     + 
Sbjct: 857 INAGGEHSLAVGNNGYAYAWGWNLYRQLGDGTTSNSSVPVPVRDPTSPADASKGLQATRF 916

Query: 275 AAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAI 315
           + G  + LAV  NG  Y++G  S   LG G   D   P ++
Sbjct: 917 SVGDHHSLAVGSNGYAYAWGENSYGQLGDGTTDDSNVPVSV 957



 Score = 39.7 bits (91), Expect = 3.2,   Method: Compositional matrix adjust.
 Identities = 45/195 (23%), Positives = 78/195 (40%), Gaps = 28/195 (14%)

Query: 114 MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAH-------V 165
           +Q++ G  H+L + S+   ++ G +  G LG+   T       R+  P++          
Sbjct: 796 VQVSAGYSHSLAVGSDGYTYAWGLNNYGQLGNS-NTVDSTVPVRVRDPTSPKDASKGLKA 854

Query: 166 VQVSASENHAAFVLQSGQVFTCG------------DNSSFCCGHRDTNRPIFRPRLVEAL 213
             ++A   H+  V  +G  +  G             NSS     RD   P       +A 
Sbjct: 855 TAINAGGEHSLAVGNNGYAYAWGWNLYRQLGDGTTSNSSVPVPVRDPTSP------ADAS 908

Query: 214 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA-PLEEVGSVV 272
           KG+   + + G + +  +   G+ +  G N++GQLG G T D   P S+   L+ V +  
Sbjct: 909 KGLQATRFSVGDHHSLAVGSNGYAYAWGENSYGQLGDGTTDDSNVPVSVLFNLQPVITAA 968

Query: 273 QIAAGPSYMLAVTGN 287
           +    P   LA   N
Sbjct: 969 RFDTSPGTNLASVSN 983


>gi|115439409|ref|NP_001043984.1| Os01g0700200 [Oryza sativa Japonica Group]
 gi|56784719|dbj|BAD81868.1| zinc finger protein-like [Oryza sativa Japonica Group]
 gi|56785284|dbj|BAD82210.1| zinc finger protein-like [Oryza sativa Japonica Group]
 gi|113533515|dbj|BAF05898.1| Os01g0700200 [Oryza sativa Japonica Group]
 gi|215704825|dbj|BAG94853.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 1044

 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 92/322 (28%), Positives = 147/322 (45%), Gaps = 20/322 (6%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V Q++    H A   + G+VFT G+      GH  T+  I RP+LVE+L       ++ G
Sbjct: 258 VNQIACGTRHVALTTRQGEVFTWGEEFGGRLGH-GTDADISRPKLVESLSLTVVDLISCG 316

Query: 225 LNFTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSYM 281
              T  +T  G +   G  ++  G LG G  +    PK ++ PLE +  V+ +A G  + 
Sbjct: 317 EFHTCAVTTSGDLFNWGDGSYNVGLLGCGTEVSYWLPKKVSGPLEGL-QVLSVACGSWHS 375

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS- 340
              T +G +Y+FG G+   LGHG++     P+ ++     G   ++V+ G  H  A+   
Sbjct: 376 ALTTSSGKLYTFGDGTFGVLGHGDRETLAYPKEVEAL--SGFKTIKVACGIWHSAAIVEV 433

Query: 341 ---------SGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 391
                    S  +YTWG G    LGHGD+  + +P+ + +L  +   Q+      T  L 
Sbjct: 434 TNQTGANVMSKKLYTWGDGDKNRLGHGDKEPRLVPKCVQALLEYNFHQLACGHNMTVALA 493

Query: 392 DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRL 451
            +G V+  G    G LG P        L   + D L +  V +IS G  H  V+T R  +
Sbjct: 494 TSGRVFTMGSSSNGQLGNPKSDGKQPCL---VQDRLASELVEEISCGASHVTVLTSRSEV 550

Query: 452 FGFGDNERAQLGHDTLRGCLEP 473
           + +G     +LGH  L+   +P
Sbjct: 551 YTWGMGANGRLGHGDLKDRKKP 572



 Score =  105 bits (263), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 89/272 (32%), Positives = 132/272 (48%), Gaps = 19/272 (6%)

Query: 116 ITTGRYHTLLISNS-SVFSCG--SSLCGVLGHGPETTQCVSFTRINFP-SAAHVVQVSAS 171
           I+ G +HT  ++ S  +F+ G  S   G+LG G E +  +   +++ P     V+ V+  
Sbjct: 313 ISCGEFHTCAVTTSGDLFNWGDGSYNVGLLGCGTEVSYWLP-KKVSGPLEGLQVLSVACG 371

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL------ 225
             H+A    SG+++T GD +    GH D     + P+ VEAL G    +V  G+      
Sbjct: 372 SWHSALTTSSGKLYTFGDGTFGVLGHGDRETLAY-PKEVEALSGFKTIKVACGIWHSAAI 430

Query: 226 ----NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 281
               N TG   +   ++T G     +LGHGD   R  PK +  L E  +  Q+A G +  
Sbjct: 431 VEVTNQTGANVMSKKLYTWGDGDKNRLGHGDKEPRLVPKCVQALLEY-NFHQLACGHNMT 489

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 341
           +A+  +G V++ GS SN  LG+  + D  QP  +Q  R     V  +S G  HV  L S 
Sbjct: 490 VALATSGRVFTMGSSSNGQLGN-PKSDGKQPCLVQD-RLASELVEEISCGASHVTVLTSR 547

Query: 342 GYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
             VYTWG G  G LGHGD  D+  P  + +LK
Sbjct: 548 SEVYTWGMGANGRLGHGDLKDRKKPCLVEALK 579



 Score = 99.0 bits (245), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 100/354 (28%), Positives = 148/354 (41%), Gaps = 40/354 (11%)

Query: 115 QITTGRYHTLLISNS-SVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHVV 166
           QI  G  H  L +    VF+ G    G LGHG       P+  + +S T ++        
Sbjct: 260 QIACGTRHVALTTRQGEVFTWGEEFGGRLGHGTDADISRPKLVESLSLTVVDL------- 312

Query: 167 QVSASENHAAFVLQSGQVFTCGDNSS----FCCGHRDTNRPIFRPRLVEA-LKGVPCKQV 221
            +S  E H   V  SG +F  GD S       CG   T    + P+ V   L+G+    V
Sbjct: 313 -ISCGEFHTCAVTTSGDLFNWGDGSYNVGLLGCG---TEVSYWLPKKVSGPLEGLQVLSV 368

Query: 222 TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 281
             G   +   T  G ++T G  T G LGHGD      PK +  L    ++ ++A G  + 
Sbjct: 369 ACGSWHSALTTSSGKLYTFGDGTFGVLGHGDRETLAYPKEVEALSGFKTI-KVACGIWHS 427

Query: 282 LAV------TGNGVV----YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG 331
            A+      TG  V+    Y++G G    LGHG++   L P+ +Q       H  +++ G
Sbjct: 428 AAIVEVTNQTGANVMSKKLYTWGDGDKNRLGHGDKEPRLVPKCVQALLEYNFH--QLACG 485

Query: 332 DEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 391
               VAL +SG V+T G    G LG+     K        L S L  ++        VL 
Sbjct: 486 HNMTVALATSGRVFTMGSSSNGQLGNPKSDGKQPCLVQDRLASELVEEISCGASHVTVLT 545

Query: 392 DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVV 445
               VY +G    G LG  D  + D+  +P ++++L+  HV  IS G   T  +
Sbjct: 546 SRSEVYTWGMGANGRLGHGD--LKDRK-KPCLVEALKDRHVKSISCGSNFTTCI 596



 Score = 88.2 bits (217), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 78/293 (26%), Positives = 131/293 (44%), Gaps = 16/293 (5%)

Query: 204 IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 263
           +  P+ +E+   +   Q+  G       T +G V T G    G+LGHG   D   PK + 
Sbjct: 244 VLIPKPLESDVVLDVNQIACGTRHVALTTRQGEVFTWGEEFGGRLGHGTDADISRPKLVE 303

Query: 264 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC--LGHGEQHDELQPRAIQTFRRK 321
            L  +  V  I+ G  +  AVT +G ++++G GS     LG G +     P+ + +   +
Sbjct: 304 SL-SLTVVDLISCGEFHTCAVTTSGDLFNWGDGSYNVGLLGCGTEVSYWLPKKV-SGPLE 361

Query: 322 GIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVC 381
           G+ V+ V+ G  H     SSG +YT+G G  G LGHGD      P+ + +L     ++V 
Sbjct: 362 GLQVLSVACGSWHSALTTSSGKLYTFGDGTFGVLGHGDRETLAYPKEVEALSGFKTIKVA 421

Query: 382 ARKRKTFVLVDTGSVYG--------FGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVS 433
                +  +V+  +  G        + W G G       G  +  L P+ + +L  ++  
Sbjct: 422 CGIWHSAAIVEVTNQTGANVMSKKLYTW-GDGDKNRLGHGDKEPRLVPKCVQALLEYNFH 480

Query: 434 QISTGLYHTVVVTDRGRLFGFGDNERAQLGH---DTLRGCLEPTEIFIQEMEE 483
           Q++ G   TV +   GR+F  G +   QLG+   D  + CL    +  + +EE
Sbjct: 481 QLACGHNMTVALATSGRVFTMGSSSNGQLGNPKSDGKQPCLVQDRLASELVEE 533



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 50/201 (24%), Positives = 88/201 (43%), Gaps = 8/201 (3%)

Query: 277 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVV 336
           G  Y+       V  S G  S+ C     + D L P+ +++     + V +++ G  HV 
Sbjct: 216 GDVYVWGEVWTDVTPSDGHTSSSC----SKVDVLIPKPLES--DVVLDVNQIACGTRHVA 269

Query: 337 ALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSV 396
                G V+TWG+ + G LGHG + D + P+ + SL   +   +   +  T  +  +G +
Sbjct: 270 LTTRQGEVFTWGEEFGGRLGHGTDADISRPKLVESLSLTVVDLISCGEFHTCAVTTSGDL 329

Query: 397 YGFGWMGFGSLGFPDRGVSDKVLRPRILD-SLRAHHVSQISTGLYHTVVVTDRGRLFGFG 455
           + +G  G  ++G    G       P+ +   L    V  ++ G +H+ + T  G+L+ FG
Sbjct: 330 FNWG-DGSYNVGLLGCGTEVSYWLPKKVSGPLEGLQVLSVACGSWHSALTTSSGKLYTFG 388

Query: 456 DNERAQLGHDTLRGCLEPTEI 476
           D     LGH        P E+
Sbjct: 389 DGTFGVLGHGDRETLAYPKEV 409


>gi|428184654|gb|EKX53509.1| hypothetical protein GUITHDRAFT_64398, partial [Guillardia theta
           CCMP2712]
          Length = 279

 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 78/268 (29%), Positives = 129/268 (48%), Gaps = 6/268 (2%)

Query: 188 GDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQ 247
           G   + C GH       + P+ +++LK     QV  G      L   G +++ G   +G+
Sbjct: 3   GTGFNLCLGHGSHANEKY-PKPIKSLKEKGVIQVAVGPQHCSALCSSGQIYSWGIGLNGR 61

Query: 248 LGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH 307
           LGHG+  D   PK +A  ++  + VQIA G ++   +T +G +YS+G G N  LG+GE+H
Sbjct: 62  LGHGNIQDSSAPKMLASTKKNCTAVQIACGAAHSAYLTQDGKLYSWGRGLNGELGNGERH 121

Query: 308 DELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPE 367
           D+  P  +   R + + V  V+ G     A    G +++WG G  G LG GD  D+  P 
Sbjct: 122 DQWTPNLV--LRLRDLVVSYVACGTNTTFACTGGGLLFSWGSGKHGCLGLGDREDRLEPS 179

Query: 368 PLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSL 427
            +   +    ++V   +     L + G ++G+   G G+ G    G + +VL P  L   
Sbjct: 180 LVRLREEDRIIRVACGEHHCLALTEDGKLWGW---GRGTGGCHGLGHTSEVLSPHKLPMP 236

Query: 428 RAHHVSQISTGLYHTVVVTDRGRLFGFG 455
               +  +S G +H+  +T RG +F FG
Sbjct: 237 EDRTIVSMSCGRWHSAYLTIRGDIFCFG 264



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 74/271 (27%), Positives = 133/271 (49%), Gaps = 10/271 (3%)

Query: 132 FSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNS 191
           +  G +LC  LGHG    +      I       V+QV+    H + +  SGQ+++ G   
Sbjct: 2   WGTGFNLC--LGHGSHANEKYP-KPIKSLKEKGVIQVAVGPQHCSALCSSGQIYSWGIGL 58

Query: 192 SFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHG 251
           +   GH +         L    K     Q+  G   + +LT  G +++ G   +G+LG+G
Sbjct: 59  NGRLGHGNIQDSSAPKMLASTKKNCTAVQIACGAAHSAYLTQDGKLYSWGRGLNGELGNG 118

Query: 252 DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQ 311
           +  D+ TP  +  L ++  V  +A G +   A TG G+++S+GSG + CLG G++ D L+
Sbjct: 119 ERHDQWTPNLVLRLRDL-VVSYVACGTNTTFACTGGGLLFSWGSGKHGCLGLGDREDRLE 177

Query: 312 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY--CGALGHGDEIDKTLPEPL 369
           P  ++   R+   ++RV+ G+ H +AL   G ++ WG+G   C  LGH  E+      P+
Sbjct: 178 PSLVRL--REEDRIIRVACGEHHCLALTEDGKLWGWGRGTGGCHGLGHTSEVLSPHKLPM 235

Query: 370 SSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 400
              ++ +++  C R    ++ +  G ++ FG
Sbjct: 236 PEDRTIVSMS-CGRWHSAYLTI-RGDIFCFG 264



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 66/193 (34%), Positives = 100/193 (51%), Gaps = 6/193 (3%)

Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 351
           S+G+G N CLGHG   +E  P+ I++ + KG  V++V+ G +H  AL SSG +Y+WG G 
Sbjct: 1   SWGTGFNLCLGHGSHANEKYPKPIKSLKEKG--VIQVAVGPQHCSALCSSGQIYSWGIGL 58

Query: 352 CGALGHGDEIDKTLPEPLSSLKSHL-AVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFP 410
            G LGHG+  D + P+ L+S K +  AVQ+      +  L   G +Y +G    G LG  
Sbjct: 59  NGRLGHGNIQDSSAPKMLASTKKNCTAVQIACGAAHSAYLTQDGKLYSWGRGLNGELGNG 118

Query: 411 DRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGC 470
           +R        P ++  LR   VS ++ G   T   T  G LF +G  +   LG       
Sbjct: 119 ER---HDQWTPNLVLRLRDLVVSYVACGTNTTFACTGGGLLFSWGSGKHGCLGLGDREDR 175

Query: 471 LEPTEIFIQEMEE 483
           LEP+ + ++E + 
Sbjct: 176 LEPSLVRLREEDR 188


>gi|167518173|ref|XP_001743427.1| hypothetical protein [Monosiga brevicollis MX1]
 gi|163778526|gb|EDQ92141.1| predicted protein [Monosiga brevicollis MX1]
          Length = 1024

 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 103/339 (30%), Positives = 160/339 (47%), Gaps = 34/339 (10%)

Query: 144 HGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNR- 202
            GP +T   S+  +  PS       +A   H+  V   G V++ G N      HR   R 
Sbjct: 18  EGPIST---SYRSLAVPSGLRAA--AAGAYHSLLVTTDGLVYSAGKND-----HRQLGRS 67

Query: 203 -PIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRP---T 258
            P    + +EA++    +QV AG +F+  L  RG V+  G+   GQLG G          
Sbjct: 68  GPAGIFKRIEAIEVASIRQVAAGEDFSLMLDDRGKVYAVGAGERGQLGCGRQTSEEGHRV 127

Query: 259 PKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTF 318
           PK I  L +V  +V ++ G  + LA++ + +V+++G  +N  LG+G      QP  I   
Sbjct: 128 PKIIRSLHDV-PIVALSVGGRHALALSASSIVFAWGENANGQLGNGHFVPSYQPTPIPEL 186

Query: 319 RRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAV 378
             +G  VV ++AG +H +AL ++  +Y +G    G LG GD   +  PE + +      V
Sbjct: 187 NGRG--VVGLAAGRQHSLALTAASELYAFGANEHGQLGVGDTKPRLRPELVRAALRKGLV 244

Query: 379 QVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAH-HVSQIST 437
           +V A    +     TG  + +G   +G  G  D   +D +L PR +DS++ H H++ I+T
Sbjct: 245 KVSAGDFHSLARSATGHAFAWGGNQWGQCGVGDD--ADAILLPREIDSVQEHGHIADIAT 302

Query: 438 GLYHTV--VVTD-----------RGRLFGFGDNERAQLG 463
           G  H+V  VVT            +  LF FG N  AQLG
Sbjct: 303 GKRHSVLLVVTSNQTTPTPSTFHKQLLFTFGANSLAQLG 341



 Score =  102 bits (253), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 79/265 (29%), Positives = 120/265 (45%), Gaps = 16/265 (6%)

Query: 218 CKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTP----KSIAPLEEVGSVVQ 273
            +   AG   +  +T  G V++ G N H QLG      R  P    K I  +E V S+ Q
Sbjct: 34  LRAAAAGAYHSLLVTTDGLVYSAGKNDHRQLG------RSGPAGIFKRIEAIE-VASIRQ 86

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRR-KGIHVVRVSAGD 332
           +AAG  + L +   G VY+ G+G    LG G Q  E   R  +  R    + +V +S G 
Sbjct: 87  VAAGEDFSLMLDDRGKVYAVGAGERGQLGCGRQTSEEGHRVPKIIRSLHDVPIVALSVGG 146

Query: 333 EHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVD 392
            H +AL +S  V+ WG+   G LG+G  +    P P+  L     V + A ++ +  L  
Sbjct: 147 RHALALSASSIVFAWGENANGQLGNGHFVPSYQPTPIPELNGRGVVGLAAGRQHSLALTA 206

Query: 393 TGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLF 452
              +Y FG    G LG  D   +   LRP ++ +     + ++S G +H++  +  G  F
Sbjct: 207 ASELYAFGANEHGQLGVGD---TKPRLRPELVRAALRKGLVKVSAGDFHSLARSATGHAF 263

Query: 453 GFGDNERAQLG-HDTLRGCLEPTEI 476
            +G N+  Q G  D     L P EI
Sbjct: 264 AWGGNQWGQCGVGDDADAILLPREI 288



 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 62/232 (26%), Positives = 108/232 (46%), Gaps = 15/232 (6%)

Query: 115 QITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQ------CVSFTRINFPSAAHVVQ 167
           Q+  G   +L++ +   V++ G+   G LG G +T++       +  +  + P    +V 
Sbjct: 86  QVAAGEDFSLMLDDRGKVYAVGAGERGQLGCGRQTSEEGHRVPKIIRSLHDVP----IVA 141

Query: 168 VSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF 227
           +S    HA  +  S  VF  G+N++   G+     P ++P  +  L G     + AG   
Sbjct: 142 LSVGGRHALALSASSIVFAWGENANGQLGNGHFV-PSYQPTPIPELNGRGVVGLAAGRQH 200

Query: 228 TGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN 287
           +  LT    ++  G+N HGQLG GDT  R  P+ +      G +V+++AG  + LA +  
Sbjct: 201 SLALTAASELYAFGANEHGQLGVGDTKPRLRPELVRAALRKG-LVKVSAGDFHSLARSAT 259

Query: 288 GVVYSFGSGSNFCLGHGEQHDE-LQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
           G  +++G       G G+  D  L PR I + +  G H+  ++ G  H V L
Sbjct: 260 GHAFAWGGNQWGQCGVGDDADAILLPREIDSVQEHG-HIADIATGKRHSVLL 310


>gi|428166922|gb|EKX35889.1| hypothetical protein GUITHDRAFT_40307, partial [Guillardia theta
           CCMP2712]
          Length = 277

 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 85/286 (29%), Positives = 140/286 (48%), Gaps = 16/286 (5%)

Query: 185 FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG----LNFTGFLTIRGHVHTC 240
           F+ G N+    G   T   +  P  + AL+G+    V  G       +  +T +G V+T 
Sbjct: 1   FSWGFNNDGALG-LGTTDAVGSPCPIIALQGLLVVSVACGGGSEEQHSAAVTEQGQVYTW 59

Query: 241 GSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 300
           GS   GQLGHGD+ +   P+ I  L+    +V++A G ++ + V+  G+V+++G G    
Sbjct: 60  GSGKSGQLGHGDSQNLVLPRLIVGLQS-NPIVEVACGSAHTVVVSKAGLVFAWGWGHFGQ 118

Query: 301 LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 360
           LG G  H+   P  +Q     G+ V +V+ G  H   +  SG+VYTWG G  G LGHGD+
Sbjct: 119 LGVGSTHNSNDP--VQVTSLDGVKVCKVACGSAHTAVVTESGHVYTWGWGVNGQLGHGDD 176

Query: 361 IDKTLPEPLSSLKS-HLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGV--SDK 417
             ++ P  +  L   +++   C       V     +V+ +GW  +G LG     +   +K
Sbjct: 177 ASQSRPMYVKKLHGIYVSTLACGLAHTVVVSEVDRAVFSWGWDEYGQLGHGGWDIFGGNK 236

Query: 418 VLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 463
              PR +  L+     QI+ G  +T+ ++ RG ++ FG  +  QLG
Sbjct: 237 NRSPRPIKDLQ-----QIACGSSYTLALSSRGDVYAFGWGKDGQLG 277



 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 80/231 (34%), Positives = 115/231 (49%), Gaps = 11/231 (4%)

Query: 239 TCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAG----PSYMLAVTGNGVVYSFG 294
           + G N  G LG G T    +P  I  L+ +  VV +A G      +  AVT  G VY++G
Sbjct: 2   SWGFNNDGALGLGTTDAVGSPCPIIALQGL-LVVSVACGGGSEEQHSAAVTEQGQVYTWG 60

Query: 295 SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGA 354
           SG +  LGHG+  + + PR I   +   I  V V+ G  H V +  +G V+ WG G+ G 
Sbjct: 61  SGKSGQLGHGDSQNLVLPRLIVGLQSNPI--VEVACGSAHTVVVSKAGLVFAWGWGHFGQ 118

Query: 355 LGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGV 414
           LG G   +   P  ++SL      +V      T V+ ++G VY +GW   G LG  D   
Sbjct: 119 LGVGSTHNSNDPVQVTSLDGVKVCKVACGSAHTAVVTESGHVYTWGWGVNGQLGHGDDAS 178

Query: 415 SDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGR-LFGFGDNERAQLGH 464
                RP  +  L   +VS ++ GL HTVVV++  R +F +G +E  QLGH
Sbjct: 179 QS---RPMYVKKLHGIYVSTLACGLAHTVVVSEVDRAVFSWGWDEYGQLGH 226



 Score =  103 bits (256), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 81/245 (33%), Positives = 114/245 (46%), Gaps = 15/245 (6%)

Query: 170 ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
           + E H+A V + GQV+T G   S   GH D+   +  PRL+  L+  P  +V  G   T 
Sbjct: 42  SEEQHSAAVTEQGQVYTWGSGKSGQLGHGDSQNLVL-PRLIVGLQSNPIVEVACGSAHTV 100

Query: 230 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 289
            ++  G V   G    GQLG G T +   P  +  L+ V  V ++A G ++   VT +G 
Sbjct: 101 VVSKAGLVFAWGWGHFGQLGVGSTHNSNDPVQVTSLDGV-KVCKVACGSAHTAVVTESGH 159

Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEH-VVALDSSGYVYTWG 348
           VY++G G N  LGHG+  D  Q R +   +  GI+V  ++ G  H VV  +    V++WG
Sbjct: 160 VYTWGWGVNGQLGHGD--DASQSRPMYVKKLHGIYVSTLACGLAHTVVVSEVDRAVFSWG 217

Query: 349 KGYCGALGHGDEI-----DKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 403
               G LGHG            P P+  L+     Q+      T  L   G VY FGW  
Sbjct: 218 WDEYGQLGHGGWDIFGGNKNRSPRPIKDLQ-----QIACGSSYTLALSSRGDVYAFGWGK 272

Query: 404 FGSLG 408
            G LG
Sbjct: 273 DGQLG 277



 Score = 86.3 bits (212), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 59/178 (33%), Positives = 89/178 (50%), Gaps = 9/178 (5%)

Query: 291 YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG----DEHVVALDSSGYVYT 346
           +S+G  ++  LG G       P  I     +G+ VV V+ G    ++H  A+   G VYT
Sbjct: 1   FSWGFNNDGALGLGTTDAVGSPCPI--IALQGLLVVSVACGGGSEEQHSAAVTEQGQVYT 58

Query: 347 WGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGS 406
           WG G  G LGHGD  +  LP  +  L+S+  V+V      T V+   G V+ +GW  FG 
Sbjct: 59  WGSGKSGQLGHGDSQNLVLPRLIVGLQSNPIVEVACGSAHTVVVSKAGLVFAWGWGHFGQ 118

Query: 407 LGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 464
           LG      S+  ++   LD ++   V +++ G  HT VVT+ G ++ +G     QLGH
Sbjct: 119 LGVGSTHNSNDPVQVTSLDGVK---VCKVACGSAHTAVVTESGHVYTWGWGVNGQLGH 173



 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 68/243 (27%), Positives = 106/243 (43%), Gaps = 16/243 (6%)

Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 179
           ++   +     V++ GS   G LGHG      +    +   S   +V+V+    H   V 
Sbjct: 45  QHSAAVTEQGQVYTWGSGKSGQLGHGDSQNLVLPRLIVGLQSNP-IVEVACGSAHTVVVS 103

Query: 180 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 239
           ++G VF  G       G   T+     P  V +L GV   +V  G   T  +T  GHV+T
Sbjct: 104 KAGLVFAWGWGHFGQLGVGSTHNS-NDPVQVTSLDGVKVCKVACGSAHTAVVTESGHVYT 162

Query: 240 CGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTG-NGVVYSFGSGSN 298
            G   +GQLGHGD   +  P  +  L  +  V  +A G ++ + V+  +  V+S+G    
Sbjct: 163 WGWGVNGQLGHGDDASQSRPMYVKKLHGI-YVSTLACGLAHTVVVSEVDRAVFSWGWDEY 221

Query: 299 FCLGHGEQ-----HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 353
             LGHG       +    PR I+  +       +++ G  + +AL S G VY +G G  G
Sbjct: 222 GQLGHGGWDIFGGNKNRSPRPIKDLQ-------QIACGSSYTLALSSRGDVYAFGWGKDG 274

Query: 354 ALG 356
            LG
Sbjct: 275 QLG 277



 Score = 55.1 bits (131), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 38/136 (27%), Positives = 68/136 (50%), Gaps = 7/136 (5%)

Query: 345 YTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVC----ARKRKTFVLVDTGSVYGFG 400
           ++WG    GALG G       P P+ +L+  L V V     + ++ +  + + G VY +G
Sbjct: 1   FSWGFNNDGALGLGTTDAVGSPCPIIALQGLLVVSVACGGGSEEQHSAAVTEQGQVYTWG 60

Query: 401 WMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERA 460
               G LG  D   S  ++ PR++  L+++ + +++ G  HTVVV+  G +F +G     
Sbjct: 61  SGKSGQLGHGD---SQNLVLPRLIVGLQSNPIVEVACGSAHTVVVSKAGLVFAWGWGHFG 117

Query: 461 QLGHDTLRGCLEPTEI 476
           QLG  +     +P ++
Sbjct: 118 QLGVGSTHNSNDPVQV 133


>gi|307686853|ref|ZP_07629299.1| regulator of chromosome condensation RCC1 [Clostridium
           cellulovorans 743B]
          Length = 671

 Score =  116 bits (290), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 101/362 (27%), Positives = 165/362 (45%), Gaps = 21/362 (5%)

Query: 102 HSSDIVETSAGNMQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFP 160
           HS  +V  ++G + ++ G   T+ + N  +V+S G +  G LG G   T   S + +   
Sbjct: 26  HSQKVVAGTSGYIAVSAGNTTTIALKNDGTVWSWGFNQNGHLGDG---TTSNSNSPVQVK 82

Query: 161 SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQ 220
               +  +SA   H   +   G V+T G   S   G   TN     P  +  L G+    
Sbjct: 83  GLNGITAISAGWAHFVALKSDGTVWTWGVGYSGELGDG-TNSLRTTPAPINGLTGITA-- 139

Query: 221 VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 280
           ++AG N T  L   G + + G N +GQLG G+T +   P  +    ++G +  I++G  +
Sbjct: 140 ISAGWNHTLALKADGTLWSWGQNQYGQLGTGNTTNSNIPLQVP--GQIG-ITSISSGGGH 196

Query: 281 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 340
            L +  +G V+S+G  +   LG+G   +   P  I         ++ VSAG  H  AL S
Sbjct: 197 SLVIKNDGTVWSWGCNNFGQLGNGTNSNNPTPHQISGLN----GIINVSAGVIHSTALKS 252

Query: 341 SGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 400
            G V+ WG  + G L +G++ID  +P   + L   +A  + A    +  +   G+ + +G
Sbjct: 253 DGTVWNWGCNFRGELANGNKIDSYIPVQANGLNGIIA--ITAGWEFSSAIKSDGTFWVWG 310

Query: 401 WMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERA 460
              +G LG    G    V  P  + SL    ++ I TG  +TV +   G +F FG+N   
Sbjct: 311 VNDYGQLG---NGSKSDVTSPMQVSSLSG--ITAIDTGATYTVALKTDGNIFAFGENTYG 365

Query: 461 QL 462
           QL
Sbjct: 366 QL 367



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 63/207 (30%), Positives = 104/207 (50%), Gaps = 15/207 (7%)

Query: 272 VQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH-VVRVSA 330
           + ++AG +  +A+  +G V+S+G   N  LG G   +   P      + KG++ +  +SA
Sbjct: 38  IAVSAGNTTTIALKNDGTVWSWGFNQNGHLGDGTTSNSNSP-----VQVKGLNGITAISA 92

Query: 331 GDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVL 390
           G  H VAL S G V+TWG GY G LG G    +T P P++ L    A  + A    T  L
Sbjct: 93  GWAHFVALKSDGTVWTWGVGYSGELGDGTNSLRTTPAPINGLTGITA--ISAGWNHTLAL 150

Query: 391 VDTGSVYGFGWMGFGSLGFPDRGVSDKVLR-PRILDSLRAHHVSQISTGLYHTVVVTDRG 449
              G+++ +G   +G LG  +   S+  L+ P  +       ++ IS+G  H++V+ + G
Sbjct: 151 KADGTLWSWGQNQYGQLGTGNTTNSNIPLQVPGQI------GITSISSGGGHSLVIKNDG 204

Query: 450 RLFGFGDNERAQLGHDTLRGCLEPTEI 476
            ++ +G N   QLG+ T      P +I
Sbjct: 205 TVWSWGCNNFGQLGNGTNSNNPTPHQI 231



 Score = 69.7 bits (169), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 68/273 (24%), Positives = 121/273 (44%), Gaps = 16/273 (5%)

Query: 112 GNMQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSA 170
           G   I+ G  HTL L ++ +++S G +  G LG G  T   +    +  P    +  +S+
Sbjct: 136 GITAISAGWNHTLALKADGTLWSWGQNQYGQLGTGNTTNSNI---PLQVPGQIGITSISS 192

Query: 171 SENHAAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
              H+  +   G V++ G N+    G+  ++N P   P  +  L G+    V+AG+  + 
Sbjct: 193 GGGHSLVIKNDGTVWSWGCNNFGQLGNGTNSNNP--TPHQISGLNGI--INVSAGVIHST 248

Query: 230 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 289
            L   G V   G N  G+L +G+ +D   P     L     ++ I AG  +  A+  +G 
Sbjct: 249 ALKSDGTVWNWGCNFRGELANGNKIDSYIPVQANGLN---GIIAITAGWEFSSAIKSDGT 305

Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 349
            + +G      LG+G + D   P  + +       +  +  G  + VAL + G ++ +G+
Sbjct: 306 FWVWGVNDYGQLGNGSKSDVTSPMQVSSLS----GITAIDTGATYTVALKTDGNIFAFGE 361

Query: 350 GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCA 382
              G LG+G     T PE +S   +++A    A
Sbjct: 362 NTYGQLGNGTTTGSTTPELVSIGDTYVATDKSA 394


>gi|410211612|gb|JAA03025.1| hect domain and RLD 6 [Pan troglodytes]
          Length = 1020

 Score =  116 bits (290), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 89/274 (32%), Positives = 130/274 (47%), Gaps = 8/274 (2%)

Query: 193 FCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGD 252
           FC G   T+    + R      G    Q  +G   +  L     V +CG N+ GQLG   
Sbjct: 3   FCWG---TDSRELQRRRTAGSPGAELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRG 59

Query: 253 TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGE-QHDELQ 311
                 P+ I  LE + +V  ++ G  + LAV   G V+++G+GS   LG GE +     
Sbjct: 60  AQRGELPEPIQALETL-TVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFT 118

Query: 312 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEI-DKTLPEPLS 370
           P+ I T    GI +++VS G  H +AL     V++WGK   G LG G E   +  P+ + 
Sbjct: 119 PKKITTL--NGIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEFPSQASPQRVR 176

Query: 371 SLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAH 430
           SL+     QV A    +F L   G+ +G+G    G L    R V  +  +P  + +L+  
Sbjct: 177 SLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSSGQLALSGRNVPVQSNKPLSVGALKNL 236

Query: 431 HVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 464
            V  IS G  HT V+T  G++F FGDN   QLG+
Sbjct: 237 GVVYISCGDAHTAVLTQDGKVFTFGDNRSGQLGY 270



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 89/302 (29%), Positives = 147/302 (48%), Gaps = 20/302 (6%)

Query: 163 AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 222
           A ++Q ++ E H+  +L + +V +CGDNS    G R   R    P  ++AL+ +    V+
Sbjct: 23  AELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGEL-PEPIQALETLTVDLVS 81

Query: 223 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRP-TPKSIAPLEEVGSVVQIAAGPSYM 281
            G   +  +  +G V   G+ + GQLG G+  +   TPK I  L  +  ++Q++ G  + 
Sbjct: 82  CGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKITTLNGI-KIIQVSCGHYHS 140

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQH-DELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 340
           LA++ +  V+S+G  S+  LG G++   +  P+ +++   +GI + +V+AG  H  AL  
Sbjct: 141 LALSKDSQVFSWGKNSHGQLGLGKEFPSQASPQRVRSL--EGIPLAQVAAGGAHSFALSL 198

Query: 341 SGYVYTWGKGYCGAL---GHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVY 397
            G  + WG    G L   G    +    P  + +LK+   V +      T VL   G V+
Sbjct: 199 CGTSFGWGSNSSGQLALSGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGKVF 258

Query: 398 GFGWMGFGSLGF---PDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV-VTDRGRLFG 453
            FG    G LG+   P++     V R   +D L    VSQI  G YHT+  V   G++  
Sbjct: 259 TFGDNRSGQLGYSPTPEKRGPQLVER---IDGL----VSQIDCGSYHTLAYVHTTGQVVS 311

Query: 454 FG 455
           FG
Sbjct: 312 FG 313



 Score = 91.3 bits (225), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 80/297 (26%), Positives = 132/297 (44%), Gaps = 19/297 (6%)

Query: 114 MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHV 165
           +Q  +G  H+LL+ +N  V SCG +  G LG         PE  Q +    ++       
Sbjct: 26  LQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGELPEPIQALETLTVDL------ 79

Query: 166 VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 225
             VS  + H+  V   G+VF  G  S    G  +     F P+ +  L G+   QV+ G 
Sbjct: 80  --VSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKITTLNGIKIIQVSCGH 137

Query: 226 NFTGFLTIRGHVHTCGSNTHGQLGHGDTL-DRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 284
             +  L+    V + G N+HGQLG G     + +P+ +  LE +  + Q+AAG ++  A+
Sbjct: 138 YHSLALSKDSQVFSWGKNSHGQLGLGKEFPSQASPQRVRSLEGI-PLAQVAAGGAHSFAL 196

Query: 285 TGNGVVYSFGSGSNFCLGHGEQHDELQP-RAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 343
           +  G  + +GS S+  L    ++  +Q  + +     K + VV +S GD H   L   G 
Sbjct: 197 SLCGTSFGWGSNSSGQLALSGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGK 256

Query: 344 VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 400
           V+T+G    G LG+    +K  P+ +  +   ++   C        +  TG V  FG
Sbjct: 257 VFTFGDNRSGQLGYSPTPEKRGPQLVERIDGLVSQIDCGSYHTLAYVHTTGQVVSFG 313


>gi|145547042|ref|XP_001459203.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124427027|emb|CAK91806.1| unnamed protein product [Paramecium tetraurelia]
          Length = 560

 Score =  116 bits (290), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 96/355 (27%), Positives = 163/355 (45%), Gaps = 39/355 (10%)

Query: 131 VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDN 190
           +F+ G +  G L  G +  +C +   +       V  +S+  NH+  V Q GQ+F CG  
Sbjct: 17  LFAWGRNKDGELSIGNQK-KCNAPKAVQGLKNQTVQLISSGSNHSGIVTQDGQLFICGSA 75

Query: 191 SSFCCGHRDTNRPIFRPR--LVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQL 248
                G  D N+P + P+  LV+A+KG+   QV  G   T  L   G V+  G   H +L
Sbjct: 76  LHGKLGFEDANQPSY-PKFLLVQAMKGLFVTQVATGDYHTLCLLDNGQVYAWGGTLHKKL 134

Query: 249 GHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG----SNFCLGHG 304
           G         P  I  L++  ++VQI  G  +  A++ NG +Y++G G    +   LGHG
Sbjct: 135 GS----KAGKPARIETLKQ--TIVQIGCGDFHSAALSANGDLYTWGGGGRDYNRGQLGHG 188

Query: 305 EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKT 364
             +D   P+ ++       ++V+ S G  H++ALD  G +++WG G  G  G G+  D  
Sbjct: 189 HLNDVETPQIVKD------NIVKFSCGGYHMMALDKDGELWSWGSGMYGETGQGEFQDSL 242

Query: 365 LPE--PLSSLKSHLAVQVCARKRK--------------TFVLVDTGSVYGFGWMGFGSLG 408
           LP+   ++  + H+ +     + K              + +L + G VY  G+   G LG
Sbjct: 243 LPKKVKINFNQKHIIIDDIFVQNKQESTIKEISLGGHHSLLLSNKGIVYACGYAQHGQLG 302

Query: 409 FPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 463
                  +K    +++  +    + QI+ G  H++V+T    ++  G N+  QLG
Sbjct: 303 IKATENQNKF---QLVIGISGKTIVQIAAGWNHSIVLTSHSDVYTCGHNQAGQLG 354



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 89/352 (25%), Positives = 145/352 (41%), Gaps = 34/352 (9%)

Query: 116 ITTGRYHT-LLISNSSVFSCGSSLCGVLG-HGPETTQCVSFTRINFPSAAHVVQVSASEN 173
           I++G  H+ ++  +  +F CGS+L G LG           F  +       V QV+  + 
Sbjct: 53  ISSGSNHSGIVTQDGQLFICGSALHGKLGFEDANQPSYPKFLLVQAMKGLFVTQVATGDY 112

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
           H   +L +GQV+  G        H+       +P  +E LK     Q+  G   +  L+ 
Sbjct: 113 HTLCLLDNGQVYAWGGTL-----HKKLGSKAGKPARIETLKQTIV-QIGCGDFHSAALSA 166

Query: 234 RGHVHTCGSN----THGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 289
            G ++T G        GQLGHG   D  TP+ +       ++V+ + G  +M+A+  +G 
Sbjct: 167 NGDLYTWGGGGRDYNRGQLGHGHLNDVETPQIVKD-----NIVKFSCGGYHMMALDKDGE 221

Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAIQ-TFRRKGI-------------HVVRVSAGDEHV 335
           ++S+GSG     G GE  D L P+ ++  F +K I              +  +S G  H 
Sbjct: 222 LWSWGSGMYGETGQGEFQDSLLPKKVKINFNQKHIIIDDIFVQNKQESTIKEISLGGHHS 281

Query: 336 VALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGS 395
           + L + G VY  G    G LG     ++   + +  +     VQ+ A    + VL     
Sbjct: 282 LLLSNKGIVYACGYAQHGQLGIKATENQNKFQLVIGISGKTIVQIAAGWNHSIVLTSHSD 341

Query: 396 VYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTD 447
           VY  G    G LG  D     +  R   L+  R   + Q+  G  H+  + D
Sbjct: 342 VYTCGHNQAGQLGVGDYESRTQYTRINFLEQRR---IKQLFAGGNHSWALID 390



 Score = 65.5 bits (158), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 76/313 (24%), Positives = 129/313 (41%), Gaps = 63/313 (20%)

Query: 115 QITTGRYHTL-LISNSSVFSCGSSLCGVLGHG---PETTQCVSFTRINFPSAAHVVQVSA 170
           Q+ TG YHTL L+ N  V++ G +L   LG     P   + +  T         +VQ+  
Sbjct: 106 QVATGDYHTLCLLDNGQVYAWGGTLHKKLGSKAGKPARIETLKQT---------IVQIGC 156

Query: 171 SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNR---------PIFRPRLVEALKGVPCKQV 221
            + H+A +  +G ++T G       G RD NR          +  P++V   K    K  
Sbjct: 157 GDFHSAALSANGDLYTWG------GGGRDYNRGQLGHGHLNDVETPQIV---KDNIVKFS 207

Query: 222 TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSI---------------APLE 266
             G +    L   G + + GS  +G+ G G+  D   PK +                  +
Sbjct: 208 CGGYHMMA-LDKDGELWSWGSGMYGETGQGEFQDSLLPKKVKINFNQKHIIIDDIFVQNK 266

Query: 267 EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRR------ 320
           +  ++ +I+ G  + L ++  G+VY+ G           QH +L  +A +   +      
Sbjct: 267 QESTIKEISLGGHHSLLLSNKGIVYACGYA---------QHGQLGIKATENQNKFQLVIG 317

Query: 321 -KGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQ 379
             G  +V+++AG  H + L S   VYT G    G LG GD   +T    ++ L+     Q
Sbjct: 318 ISGKTIVQIAAGWNHSIVLTSHSDVYTCGHNQAGQLGVGDYESRTQYTRINFLEQRRIKQ 377

Query: 380 VCARKRKTFVLVD 392
           + A    ++ L+D
Sbjct: 378 LFAGGNHSWALID 390



 Score = 61.6 bits (148), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 66/268 (24%), Positives = 113/268 (42%), Gaps = 31/268 (11%)

Query: 236 HVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 295
           ++   G N  G+L  G+      PK++  L+   +V  I++G ++   VT +G ++  GS
Sbjct: 16  YLFAWGRNKDGELSIGNQKKCNAPKAVQGLKNQ-TVQLISSGSNHSGIVTQDGQLFICGS 74

Query: 296 GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGAL 355
             +  LG  + +    P+ +     KG+ V +V+ GD H + L  +G VY WG      L
Sbjct: 75  ALHGKLGFEDANQPSYPKFLLVQAMKGLFVTQVATGDYHTLCLLDNGQVYAWGGTLHKKL 134

Query: 356 GHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG----FGSLGFPD 411
           G         P  + +LK  + VQ+      +  L   G +Y +G  G     G LG   
Sbjct: 135 GS----KAGKPARIETLKQTI-VQIGCGDFHSAALSANGDLYTWGGGGRDYNRGQLG--- 186

Query: 412 RGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCL 471
            G  + V  P+I+      ++ + S G YH + +   G L+ +G     + G    +  L
Sbjct: 187 HGHLNDVETPQIVKD----NIVKFSCGGYHMMALDKDGELWSWGSGMYGETGQGEFQDSL 242

Query: 472 EPT--------------EIFIQEMEEDT 485
            P               +IF+Q  +E T
Sbjct: 243 LPKKVKINFNQKHIIIDDIFVQNKQEST 270



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 33/136 (24%), Positives = 67/136 (49%), Gaps = 10/136 (7%)

Query: 330 AGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFV 389
           AGD+  +      Y++ WG+   G L  G++     P+ +  LK+     + +    + +
Sbjct: 8   AGDDQQIT-----YLFAWGRNKDGELSIGNQKKCNAPKAVQGLKNQTVQLISSGSNHSGI 62

Query: 390 LVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRIL--DSLRAHHVSQISTGLYHTVVVTD 447
           +   G ++  G    G LGF D   +++   P+ L   +++   V+Q++TG YHT+ + D
Sbjct: 63  VTQDGQLFICGSALHGKLGFED---ANQPSYPKFLLVQAMKGLFVTQVATGDYHTLCLLD 119

Query: 448 RGRLFGFGDNERAQLG 463
            G+++ +G     +LG
Sbjct: 120 NGQVYAWGGTLHKKLG 135



 Score = 52.8 bits (125), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 52/189 (27%), Positives = 85/189 (44%), Gaps = 22/189 (11%)

Query: 114 MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGP-ETTQCVSFTRINFPSAAHVV----- 166
           ++ + G YH + L  +  ++S GS + G  G G  + +      +INF +  H++     
Sbjct: 204 VKFSCGGYHMMALDKDGELWSWGSGMYGETGQGEFQDSLLPKKVKINF-NQKHIIIDDIF 262

Query: 167 ----------QVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDT-NRPIFRPRLVEALKG 215
                     ++S   +H+  +   G V+ CG       G + T N+  F+  LV  + G
Sbjct: 263 VQNKQESTIKEISLGGHHSLLLSNKGIVYACGYAQHGQLGIKATENQNKFQ--LVIGISG 320

Query: 216 VPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA 275
               Q+ AG N +  LT    V+TCG N  GQLG GD   R     I  LE+   + Q+ 
Sbjct: 321 KTIVQIAAGWNHSIVLTSHSDVYTCGHNQAGQLGVGDYESRTQYTRINFLEQR-RIKQLF 379

Query: 276 AGPSYMLAV 284
           AG ++  A+
Sbjct: 380 AGGNHSWAL 388



 Score = 40.0 bits (92), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 24/71 (33%), Positives = 39/71 (54%), Gaps = 2/71 (2%)

Query: 114 MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +QI  G  H++ L S+S V++CG +  G LG G   ++   +TRINF     + Q+ A  
Sbjct: 324 VQIAAGWNHSIVLTSHSDVYTCGHNQAGQLGVGDYESRT-QYTRINFLEQRRIKQLFAGG 382

Query: 173 NHAAFVLQSGQ 183
           NH+  ++   Q
Sbjct: 383 NHSWALIDYNQ 393


>gi|242091255|ref|XP_002441460.1| hypothetical protein SORBIDRAFT_09g027250 [Sorghum bicolor]
 gi|241946745|gb|EES19890.1| hypothetical protein SORBIDRAFT_09g027250 [Sorghum bicolor]
          Length = 1020

 Score =  116 bits (290), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 98/323 (30%), Positives = 149/323 (46%), Gaps = 20/323 (6%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V Q++    H A   + G+VF  G+      GH  T+  I RP+LVEAL     + +  G
Sbjct: 257 VQQIACGYRHIALTTRQGEVFAWGEELGGRLGH-GTDADISRPKLVEALAVSNVEYIACG 315

Query: 225 LNFTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSYM 281
              T  +T  G ++T G   +  G LG+G       PK ++ PLE V  V+ ++ G  + 
Sbjct: 316 EFHTCAVTASGDLYTWGDGYYNVGLLGNGAGASHWLPKRVSGPLEGV-QVLSVSCGSWHS 374

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL-DS 340
              T +G V++FG G+   LGHG++     P+ ++     G   ++V+ G  H  A+ +S
Sbjct: 375 ALTTSSGKVFTFGDGTFGALGHGKRETVGYPKEVEAL--SGFRTMKVACGLWHSAAIVES 432

Query: 341 SGYV---------YTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 391
           S +V         YTWG G    LGHGD+  + +P  + SL  +   QV      T  L 
Sbjct: 433 SNHVSINVISRKLYTWGAGDKNQLGHGDKDSRLVPTCVQSLIDYSFHQVACGHSMTIALS 492

Query: 392 DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRL 451
            +G V+  G    G LG P    SD      + D L    V +IS G  H  V+T R  +
Sbjct: 493 TSGHVFTMGSSSNGQLGNPK---SDGKQPIPVQDRLSGELVEEISCGSCHVAVLTSRSEV 549

Query: 452 FGFGDNERAQLGHDTLRGCLEPT 474
           + +G     +LGH  +    +PT
Sbjct: 550 YTWGMGANGRLGHGGVEDKKKPT 572



 Score =  107 bits (268), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 96/293 (32%), Positives = 137/293 (46%), Gaps = 24/293 (8%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSL--CGVLGHGPETTQCVSFTRINFP-SAAHVVQVSAS 171
           I  G +HT  ++ S  +++ G      G+LG+G   +  +   R++ P     V+ VS  
Sbjct: 312 IACGEFHTCAVTASGDLYTWGDGYYNVGLLGNGAGASHWLP-KRVSGPLEGVQVLSVSCG 370

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGH--RDTNRPIFRPRLVEALKGVPCKQVTAGL---- 225
             H+A    SG+VFT GD +    GH  R+T   +  P+ VEAL G    +V  GL    
Sbjct: 371 SWHSALTTSSGKVFTFGDGTFGALGHGKRET---VGYPKEVEALSGFRTMKVACGLWHSA 427

Query: 226 ------NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPS 279
                 N      I   ++T G+    QLGHGD   R  P  +  L +  S  Q+A G S
Sbjct: 428 AIVESSNHVSINVISRKLYTWGAGDKNQLGHGDKDSRLVPTCVQSLIDY-SFHQVACGHS 486

Query: 280 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 339
             +A++ +G V++ GS SN  LG+  + D  QP  +Q  R  G  V  +S G  HV  L 
Sbjct: 487 MTIALSTSGHVFTMGSSSNGQLGN-PKSDGKQPIPVQD-RLSGELVEEISCGSCHVAVLT 544

Query: 340 SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKS-HLAVQVCARKRKTFVLV 391
           S   VYTWG G  G LGHG   DK  P  + +LK  H+    C     T + +
Sbjct: 545 SRSEVYTWGMGANGRLGHGGVEDKKKPTLVEALKDRHVKSIACGSNFTTCICI 597



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 78/287 (27%), Positives = 130/287 (45%), Gaps = 21/287 (7%)

Query: 190 NSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLG 249
           ++++ C   D    I  P+ +E+   +  +Q+  G       T +G V   G    G+LG
Sbjct: 233 STNYLCSKAD----ILIPKPLESDVVLDVQQIACGYRHIALTTRQGEVFAWGEELGGRLG 288

Query: 250 HGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG--SNFCLGHGEQH 307
           HG   D   PK +  L  V +V  IA G  +  AVT +G +Y++G G  +   LG+G   
Sbjct: 289 HGTDADISRPKLVEAL-AVSNVEYIACGEFHTCAVTASGDLYTWGDGYYNVGLLGNGAGA 347

Query: 308 DELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPE 367
               P+ + +   +G+ V+ VS G  H     SSG V+T+G G  GALGHG       P+
Sbjct: 348 SHWLPKRV-SGPLEGVQVLSVSCGSWHSALTTSSGKVFTFGDGTFGALGHGKRETVGYPK 406

Query: 368 PLSSLKSHLAVQVCARKRKTFVLVDTGS----------VYGFGWMGFGSLGFPDRGVSDK 417
            + +L     ++V      +  +V++ +          +Y +G      LG  D+   D 
Sbjct: 407 EVEALSGFRTMKVACGLWHSAAIVESSNHVSINVISRKLYTWGAGDKNQLGHGDK---DS 463

Query: 418 VLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 464
            L P  + SL  +   Q++ G   T+ ++  G +F  G +   QLG+
Sbjct: 464 RLVPTCVQSLIDYSFHQVACGHSMTIALSTSGHVFTMGSSSNGQLGN 510



 Score = 62.4 bits (150), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 49/201 (24%), Positives = 88/201 (43%), Gaps = 8/201 (3%)

Query: 277 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVV 336
           G  Y+       V+ + GS +  C     + D L P+ +++     + V +++ G  H+ 
Sbjct: 215 GDVYVWGEVWTDVIPAEGSTNYLC----SKADILIPKPLES--DVVLDVQQIACGYRHIA 268

Query: 337 ALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSV 396
                G V+ WG+   G LGHG + D + P+ + +L       +   +  T  +  +G +
Sbjct: 269 LTTRQGEVFAWGEELGGRLGHGTDADISRPKLVEALAVSNVEYIACGEFHTCAVTASGDL 328

Query: 397 YGFGWMGFGSLGFPDRGV-SDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFG 455
           Y +G  G+ ++G    G  +   L  R+   L    V  +S G +H+ + T  G++F FG
Sbjct: 329 YTWG-DGYYNVGLLGNGAGASHWLPKRVSGPLEGVQVLSVSCGSWHSALTTSSGKVFTFG 387

Query: 456 DNERAQLGHDTLRGCLEPTEI 476
           D     LGH        P E+
Sbjct: 388 DGTFGALGHGKRETVGYPKEV 408


>gi|326671858|ref|XP_685964.5| PREDICTED: hypothetical protein LOC557752 [Danio rerio]
          Length = 1413

 Score =  116 bits (290), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 92/307 (29%), Positives = 145/307 (47%), Gaps = 25/307 (8%)

Query: 166 VQVSASENHAAFVLQSGQVFTCGDNS--SFCCGHRDTNRPIFRPRLVEALKGVPCKQVTA 223
           +++S  + H A V ++G++F  G N+      G + T   + +P  V+ALK    K    
Sbjct: 39  LRISCGDEHTALVTENGKLFMFGSNNWGQLGLGTKTT---VNKPTCVKALKSERVKLTAC 95

Query: 224 GLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
           G   T   T RG+++ CG N  GQLG GD  DR +   +    + G +  +AAG +   A
Sbjct: 96  GRTHTLVFTSRGNLYACGGNNEGQLGLGDCNDRTSFHLVEFFNKQGPIKMLAAGSNTSAA 155

Query: 284 VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 343
           +T +G +Y +G  S   +G G++ + L P+ +   +R    V  VS G  H   +   G 
Sbjct: 156 LTQDGRLYMWGDNSEGQIGLGKESNALTPQEVSVGKR----VFWVSCGYYHSAFVTVDGA 211

Query: 344 VYTWGKGYCGALGHGDE--IDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGW 401
           +YT+G+   G LG   E   +  +P+ ++ +   + VQV      T  L +   VY FG 
Sbjct: 212 LYTFGEKDSGKLGLSTEKLANHKVPQQVTDIPDRV-VQVACGGGHTVALTE-NEVYSFGL 269

Query: 402 MGFGSLG-----FPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGD 456
             FG LG     F  R        PR+++  R   V   + G  HT ++TD G L+ FGD
Sbjct: 270 GQFGQLGHGTFIFESR-------LPRVVEHFRKGRVKHAACGENHTALITDNGLLYTFGD 322

Query: 457 NERAQLG 463
               +LG
Sbjct: 323 GRHGKLG 329



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 101/348 (29%), Positives = 161/348 (46%), Gaps = 37/348 (10%)

Query: 114 MQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPS-----AAHVVQ 167
           ++I+ G  HT L++ N  +F  GS+  G LG G +TT       +N P+      +  V+
Sbjct: 39  LRISCGDEHTALVTENGKLFMFGSNNWGQLGLGTKTT-------VNKPTCVKALKSERVK 91

Query: 168 VSA-SENHAAFVLQSGQVFTCGDNSSFCCGHRDTN-RPIFRPRLVEAL-KGVPCKQVTAG 224
           ++A    H       G ++ CG N+    G  D N R  F   LVE   K  P K + AG
Sbjct: 92  LTACGRTHTLVFTSRGNLYACGGNNEGQLGLGDCNDRTSF--HLVEFFNKQGPIKMLAAG 149

Query: 225 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS-VVQIAAGPSYMLA 283
            N +  LT  G ++  G N+ GQ+G G   +  TP+ ++    VG  V  ++ G  +   
Sbjct: 150 SNTSAALTQDGRLYMWGDNSEGQIGLGKESNALTPQEVS----VGKRVFWVSCGYYHSAF 205

Query: 284 VTGNGVVYSFGSGSNFCLGHGEQH--DELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 341
           VT +G +Y+FG   +  LG   +   +   P+ +     +   VV+V+ G  H VAL + 
Sbjct: 206 VTVDGALYTFGEKDSGKLGLSTEKLANHKVPQQVTDIPDR---VVQVACGGGHTVAL-TE 261

Query: 342 GYVYTWGKGYCGALGHGDEI-DKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 400
             VY++G G  G LGHG  I +  LP  +   +          +  T ++ D G +Y FG
Sbjct: 262 NEVYSFGLGQFGQLGHGTFIFESRLPRVVEHFRKGRVKHAACGENHTALITDNGLLYTFG 321

Query: 401 WMGFGSLGFPDRGVSDK---VLRPRILDSLRAHHVSQISTGLYHTVVV 445
               G LG  +   +++    L PR LD    +HV  ++ G  H +V+
Sbjct: 322 DGRHGKLGLGEENFTNQFKPTLCPRFLD----YHVHSVTCGGCHMLVL 365



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 50/192 (26%), Positives = 80/192 (41%), Gaps = 16/192 (8%)

Query: 288 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 347
           G V++FG  S F              A   F  K    +R+S GDEH   +  +G ++ +
Sbjct: 13  GAVFTFGK-SKFA-----------DNAPSKFWLKNDVPLRISCGDEHTALVTENGKLFMF 60

Query: 348 GKGYCGALGHGDEIDKTLPEPLSSLKSH-LAVQVCARKRKTFVLVDTGSVYGFGWMGFGS 406
           G    G LG G +     P  + +LKS  + +  C R   T V    G++Y  G    G 
Sbjct: 61  GSNNWGQLGLGTKTTVNKPTCVKALKSERVKLTACGRTH-TLVFTSRGNLYACGGNNEGQ 119

Query: 407 LGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDT 466
           LG  D   +D+     +    +   +  ++ G   +  +T  GRL+ +GDN   Q+G   
Sbjct: 120 LGLGD--CNDRTSFHLVEFFNKQGPIKMLAAGSNTSAALTQDGRLYMWGDNSEGQIGLGK 177

Query: 467 LRGCLEPTEIFI 478
               L P E+ +
Sbjct: 178 ESNALTPQEVSV 189



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 51/198 (25%), Positives = 86/198 (43%), Gaps = 8/198 (4%)

Query: 272 VQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG 331
           ++I+ G  +   VT NG ++ FGS +   LG G +    +P  ++  + + + +   + G
Sbjct: 39  LRISCGDEHTALVTENGKLFMFGSNNWGQLGLGTKTTVNKPTCVKALKSERVKLT--ACG 96

Query: 332 DEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKT-FVL 390
             H +   S G +Y  G    G LG GD  D+T    +        +++ A    T   L
Sbjct: 97  RTHTLVFTSRGNLYACGGNNEGQLGLGDCNDRTSFHLVEFFNKQGPIKMLAAGSNTSAAL 156

Query: 391 VDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGR 450
              G +Y +G    G +G    G     L P+ +       V  +S G YH+  VT  G 
Sbjct: 157 TQDGRLYMWGDNSEGQIGL---GKESNALTPQEVSV--GKRVFWVSCGYYHSAFVTVDGA 211

Query: 451 LFGFGDNERAQLGHDTLR 468
           L+ FG+ +  +LG  T +
Sbjct: 212 LYTFGEKDSGKLGLSTEK 229


>gi|268569112|ref|XP_002640436.1| Hypothetical protein CBG08488 [Caenorhabditis briggsae]
          Length = 985

 Score =  116 bits (290), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 92/302 (30%), Positives = 139/302 (46%), Gaps = 18/302 (5%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V  V+  E H  F+ +  ++++ G N     G    +   F    V    GV   Q+ AG
Sbjct: 12  VKAVACGEQHTIFLTKDRKMWSVGSNVDGQLGRGKRSEGSFSIYPVSLTSGVGIVQIAAG 71

Query: 225 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLD-RPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
              +  +   G V   GSN HGQLG  +T+  +  PK I  L EV   VQ+A+G  + +A
Sbjct: 72  RAHSLAVADDGRVFAWGSNEHGQLGMENTITWQEMPKRINQLNEV---VQVASGSDHCIA 128

Query: 284 VTGNGVVYSFGSGSN-FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
           +T +G VY +G  ++  C+ H E  + L            I +VRV AG  H VA+ +SG
Sbjct: 129 LTEDGRVYVWGEQADGRCIHHPELVEHLN----------AIPIVRVEAGARHCVAISASG 178

Query: 343 YVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWM 402
            V+TWG+   G LG  D   +T    ++ +     V+       T +L   G  + FG  
Sbjct: 179 AVFTWGQNNSGELGMDDFRPQTSVHHVTQMDGLGVVEAACGDNHTILLTHCGRTFSFGSD 238

Query: 403 GFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQL 462
             G  GF  +   +K   P  +  L   HV++I+ G  HT+ +  RG  + FG N   QL
Sbjct: 239 ALGQCGFGKK--LEKRPNPTAVSDLIGSHVTRIAAGACHTIAII-RGSPYPFGLNSSGQL 295

Query: 463 GH 464
           G+
Sbjct: 296 GN 297



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 86/343 (25%), Positives = 152/343 (44%), Gaps = 30/343 (8%)

Query: 116 ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           +  G  HT+ ++ +  ++S GS++ G LG G  +    S   ++  S   +VQ++A   H
Sbjct: 15  VACGEQHTIFLTKDRKMWSVGSNVDGQLGRGKRSEGSFSIYPVSLTSGVGIVQIAAGRAH 74

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 234
           +  V   G+VF  G N     G  +T      P+ +  L  V   QV +G +    LT  
Sbjct: 75  SLAVADDGRVFAWGSNEHGQLGMENTITWQEMPKRINQLNEV--VQVASGSDHCIALTED 132

Query: 235 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 294
           G V+  G    G+  H        P+ +  L  +  +V++ AG  + +A++ +G V+++G
Sbjct: 133 GRVYVWGEQADGRCIH-------HPELVEHLNAI-PIVRVEAGARHCVAISASGAVFTWG 184

Query: 295 SGSNFCLGHGEQHDELQPRAI--QTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 352
             ++  LG     D+ +P+       +  G+ VV  + GD H + L   G  +++G    
Sbjct: 185 QNNSGELG----MDDFRPQTSVHHVTQMDGLGVVEAACGDNHTILLTHCGRTFSFGSDAL 240

Query: 353 GALGHGDEIDKTL-PEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 411
           G  G G +++K   P  +S L      ++ A    T  ++  GS Y FG    G LG   
Sbjct: 241 GQCGFGKKLEKRPNPTAVSDLIGSHVTRIAAGACHTIAII-RGSPYPFGLNSSGQLG--- 296

Query: 412 RGVSDKVL---RPRILDSLRAHHVSQISTGLYHTVVVTDRGRL 451
              + K++    PR  D L   HV+ +  G + T  +   G +
Sbjct: 297 ---NGKIMTQSTPRKTDDL--DHVTAVFAGYHQTFFIRSAGSI 334



 Score = 69.3 bits (168), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 53/211 (25%), Positives = 100/211 (47%), Gaps = 21/211 (9%)

Query: 263 APLEEVGSVVQ-IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHD---ELQPRAIQTF 318
           AP +  G+ V+ +A G  + + +T +  ++S GS  +  LG G++ +    + P ++ + 
Sbjct: 3   APNDADGTAVKAVACGEQHTIFLTKDRKMWSVGSNVDGQLGRGKRSEGSFSIYPVSLTS- 61

Query: 319 RRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEID-KTLPEPLSSLKSHLA 377
              G+ +V+++AG  H +A+   G V+ WG    G LG  + I  + +P+ ++ L     
Sbjct: 62  ---GVGIVQIAAGRAHSLAVADDGRVFAWGSNEHGQLGMENTITWQEMPKRINQLNE--V 116

Query: 378 VQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIST 437
           VQV +       L + G VY +G    G            +  P +++ L A  + ++  
Sbjct: 117 VQVASGSDHCIALTEDGRVYVWGEQADGRC----------IHHPELVEHLNAIPIVRVEA 166

Query: 438 GLYHTVVVTDRGRLFGFGDNERAQLGHDTLR 468
           G  H V ++  G +F +G N   +LG D  R
Sbjct: 167 GARHCVAISASGAVFTWGQNNSGELGMDDFR 197


>gi|310817521|ref|YP_003949879.1| regulator of chromosome condensation, rcc1 [Stigmatella aurantiaca
           DW4/3-1]
 gi|309390593|gb|ADO68052.1| Regulator of chromosome condensation, RCC1 [Stigmatella aurantiaca
           DW4/3-1]
          Length = 860

 Score =  116 bits (290), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 120/383 (31%), Positives = 171/383 (44%), Gaps = 42/383 (10%)

Query: 122 HTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
           HTL L  + +V++ G +  G LG+G  T +    T +  P    V+ V+ASE H+  +  
Sbjct: 155 HTLALRRDGTVWAWGFNGSGQLGNGTATDRA---TPVQVPGLTSVMAVAASEAHSLALRS 211

Query: 181 SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF------LTIR 234
            G V+  GDN     G   T      P  V  L GV    + AG N T        L +R
Sbjct: 212 DGTVWAWGDNGYGQLGD-GTKAQRTTPVQVLGLAGVTA--LAAGGNGTTVAISAHSLALR 268

Query: 235 --GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
             G V   G N+ GQLG G T +R TP  +  L    SV  +AAG  + LA+  +G V++
Sbjct: 269 SDGTVWAWGDNSAGQLGDGTTTERATPVQVLGLT---SVTALAAGAFHSLALRDDGTVWA 325

Query: 293 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGD-------EHVVALDSSGYVY 345
           +G+ S+  LG G      +P  +Q      +  V    GD       +H +AL S G V+
Sbjct: 326 WGNNSSGQLGDGTT--TARPTPVQVPGLTSVIAVAAGGGDDSLGMRGDHSLALKSDGTVW 383

Query: 346 TWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFG 405
            WG       G G    +T P  +S L    A  + A      VL   G+V+ +G    G
Sbjct: 384 AWGYNLSRQFGDGMPATRTTPVQVSELTGGTA--LVAGDLHAVVLKSDGTVWAWGDNSSG 441

Query: 406 SLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHD 465
            LG    GV+    +P  +  L A  ++ ++TG  H+V V   G ++ +GDN R QLG  
Sbjct: 442 QLG---EGVTPVRAKPMQVSGLAA--ITALATGDGHSVAVGSDGGIWAWGDNRRGQLGI- 495

Query: 466 TLRGCLEPTEIFIQEMEEDTGLA 488
              G     EI +Q     TGLA
Sbjct: 496 ---GITATREIPVQA----TGLA 511



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 98/367 (26%), Positives = 158/367 (43%), Gaps = 23/367 (6%)

Query: 112 GNMQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSA 170
           G   +  G  H +++ S+ +V++ G +  G LG G      V    +     A +  ++ 
Sbjct: 412 GGTALVAGDLHAVVLKSDGTVWAWGDNSSGQLGEG---VTPVRAKPMQVSGLAAITALAT 468

Query: 171 SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
            + H+  V   G ++  GDN     G   T     R   V+A        + AG + +  
Sbjct: 469 GDGHSVAVGSDGGIWAWGDNRRGQLGIGIT---ATREIPVQATGLASISALAAGDSHSLA 525

Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 290
           L   G V T GSN +GQLG G  +DR T   +  L ++     +AAG  + LA+  +G V
Sbjct: 526 LRGNGSVWTWGSNAYGQLGDGTAIDRATAAQVPGLTDI---TALAAGNHHSLALRNDGTV 582

Query: 291 YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVR-VSAGDEHVVALDSSGYVYTWGK 349
           + +GS     LG G       P      +  G+  +R V AG  H VA+  +G V+ WG 
Sbjct: 583 WVWGSNDFGQLGDGTVTSRKTP-----VQVSGLSAMRAVEAGPAHSVAVHLNGTVWVWGN 637

Query: 350 GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGF 409
              G LG G    + +P  +S L    AV V      +  L + G+++ +G+   G LG 
Sbjct: 638 NDFGQLGDGTVTSRAMPVQVSGLTGVTAVAVGV--YHSLALRNDGTLWAWGYNNVGQLGN 695

Query: 410 PDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG 469
              G+      P  +  L    V  ++ G  H++ +   G ++G+G N   QLG  T   
Sbjct: 696 GTSGIQST---PAQVPGLTG--VIALAAGNGHSLALRTDGTVWGWGANSFGQLGDGTTTP 750

Query: 470 CLEPTEI 476
              PT++
Sbjct: 751 RSTPTQV 757



 Score = 91.7 bits (226), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 99/373 (26%), Positives = 162/373 (43%), Gaps = 34/373 (9%)

Query: 116 ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE-- 172
           +  G +H+L L  + +V++ G++  G LG G  T +    T +  P    V+ V+A    
Sbjct: 307 LAAGAFHSLALRDDGTVWAWGNNSSGQLGDGTTTARP---TPVQVPGLTSVIAVAAGGGD 363

Query: 173 -------NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 225
                  +H+  +   G V+  G N S   G      P  R   V+  +      + AG 
Sbjct: 364 DSLGMRGDHSLALKSDGTVWAWGYNLSRQFGD---GMPATRTTPVQVSELTGGTALVAGD 420

Query: 226 NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 285
                L   G V   G N+ GQLG G T  R  P  ++ L    ++  +A G  + +AV 
Sbjct: 421 LHAVVLKSDGTVWAWGDNSSGQLGEGVTPVRAKPMQVSGLA---AITALATGDGHSVAVG 477

Query: 286 GNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVY 345
            +G ++++G      LG G       P  +Q      I  +  +AGD H +AL  +G V+
Sbjct: 478 SDGGIWAWGDNRRGQLGIGITATREIP--VQATGLASISAL--AAGDSHSLALRGNGSVW 533

Query: 346 TWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFG 405
           TWG    G LG G  ID+     +  L    A  + A    +  L + G+V+ +G   FG
Sbjct: 534 TWGSNAYGQLGDGTAIDRATAAQVPGLTDITA--LAAGNHHSLALRNDGTVWVWGSNDFG 591

Query: 406 SLGFPDRGVSDKVLRPRI--LDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 463
            LG  D  V+ +    ++  L ++RA     +  G  H+V V   G ++ +G+N+  QLG
Sbjct: 592 QLG--DGTVTSRKTPVQVSGLSAMRA-----VEAGPAHSVAVHLNGTVWVWGNNDFGQLG 644

Query: 464 HDTLRGCLEPTEI 476
             T+     P ++
Sbjct: 645 DGTVTSRAMPVQV 657



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 93/362 (25%), Positives = 157/362 (43%), Gaps = 21/362 (5%)

Query: 116 ITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           + TG  H++ + S+  +++ G +  G LG G   T+ +          A +  ++A ++H
Sbjct: 466 LATGDGHSVAVGSDGGIWAWGDNRRGQLGIGITATREIPVQATGL---ASISALAAGDSH 522

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 234
           +  +  +G V+T G N     G       I R    +         + AG + +  L   
Sbjct: 523 SLALRGNGSVWTWGSN---AYGQLGDGTAIDRATAAQVPGLTDITALAAGNHHSLALRND 579

Query: 235 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 294
           G V   GSN  GQLG G    R TP  ++ L  + +V    AGP++ +AV  NG V+ +G
Sbjct: 580 GTVWVWGSNDFGQLGDGTVTSRKTPVQVSGLSAMRAV---EAGPAHSVAVHLNGTVWVWG 636

Query: 295 SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGA 354
           +     LG G       P  +Q     G+  V V  G  H +AL + G ++ WG    G 
Sbjct: 637 NNDFGQLGDGTVTSRAMP--VQVSGLTGVTAVAV--GVYHSLALRNDGTLWAWGYNNVGQ 692

Query: 355 LGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGV 414
           LG+G    ++ P  +  L   +A+   A    +  L   G+V+G+G   FG LG    G 
Sbjct: 693 LGNGTSGIQSTPAQVPGLTGVIAL--AAGNGHSLALRTDGTVWGWGANSFGQLG---DGT 747

Query: 415 SDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPT 474
           +     P  +  L   +V  ++ G ++TV +     ++ +G     QLG  T+     P 
Sbjct: 748 TTPRSTPTQVPGLT--NVIALNAGAFYTVALRSERSVWEWGSKSAGQLGDGTVTQKTTPV 805

Query: 475 EI 476
           ++
Sbjct: 806 QV 807



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 98/364 (26%), Positives = 159/364 (43%), Gaps = 25/364 (6%)

Query: 116 ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           +  G  H+L L  N SV++ GS+  G LG G   T     T    P    +  ++A  +H
Sbjct: 516 LAAGDSHSLALRGNGSVWTWGSNAYGQLGDG---TAIDRATAAQVPGLTDITALAAGNHH 572

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRD-TNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
           +  +   G V+  G N     G    T+R    P  V  L  +  + V AG   +  + +
Sbjct: 573 SLALRNDGTVWVWGSNDFGQLGDGTVTSRKT--PVQVSGLSAM--RAVEAGPAHSVAVHL 628

Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
            G V   G+N  GQLG G    R  P  ++ L     V  +A G  + LA+  +G ++++
Sbjct: 629 NGTVWVWGNNDFGQLGDGTVTSRAMPVQVSGLT---GVTAVAVGVYHSLALRNDGTLWAW 685

Query: 294 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 353
           G  +   LG+G    +  P  +         V+ ++AG+ H +AL + G V+ WG    G
Sbjct: 686 GYNNVGQLGNGTSGIQSTPAQVPGL----TGVIALAAGNGHSLALRTDGTVWGWGANSFG 741

Query: 354 ALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRG 413
            LG G    ++ P  +  L + +A+   A    T  L    SV+ +G    G LG  D  
Sbjct: 742 QLGDGTTTPRSTPTQVPGLTNVIALNAGA--FYTVALRSERSVWEWGSKSAGQLG--DGT 797

Query: 414 VSDKVLRPRILDSLRAHHVSQISTGLYHTVVV-TDRGRLFGFGDNERAQLGHDTLRGCLE 472
           V+ K   P  +  L    V+ ++ G  H + + TDR  ++ +G N+R Q+G  T      
Sbjct: 798 VTQKT-TPVQVSGLT--DVTALAAGNAHALALRTDR-TVWAWGGNQRGQIGDGTASIMPA 853

Query: 473 PTEI 476
           P  +
Sbjct: 854 PVNV 857



 Score = 79.0 bits (193), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 87/327 (26%), Positives = 131/327 (40%), Gaps = 36/327 (11%)

Query: 168 VSASENHAAFVLQSGQVFTCGDNSSFCCGH---RDTNRPIFRPRLVEALKGVPCKQVTAG 224
           VSA+ +H   + + G V+  G N S   G+    D   P+  P L   +       V A 
Sbjct: 149 VSAAGDHTLALRRDGTVWAWGFNGSGQLGNGTATDRATPVQVPGLTSVMA------VAAS 202

Query: 225 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEV--------GSVVQIAA 276
              +  L   G V   G N +GQLG G    R TP  +  L  V        G+ V I+A
Sbjct: 203 EAHSLALRSDGTVWAWGDNGYGQLGDGTKAQRTTPVQVLGLAGVTALAAGGNGTTVAISA 262

Query: 277 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVV 336
              + LA+  +G V+++G  S   LG G   +   P  +         V  ++AG  H +
Sbjct: 263 ---HSLALRSDGTVWAWGDNSAGQLGDGTTTERATPVQVLGL----TSVTALAAGAFHSL 315

Query: 337 ALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCA-------RKRKTFV 389
           AL   G V+ WG    G LG G    +  P  +  L S +AV           R   +  
Sbjct: 316 ALRDDGTVWAWGNNSSGQLGDGTTTARPTPVQVPGLTSVIAVAAGGGDDSLGMRGDHSLA 375

Query: 390 LVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRG 449
           L   G+V+ +G+    S  F D G+      P  +  L     + +  G  H VV+   G
Sbjct: 376 LKSDGTVWAWGYN--LSRQFGD-GMPATRTTPVQVSELTGG--TALVAGDLHAVVLKSDG 430

Query: 450 RLFGFGDNERAQLGHDTLRGCLEPTEI 476
            ++ +GDN   QLG        +P ++
Sbjct: 431 TVWAWGDNSSGQLGEGVTPVRAKPMQV 457



 Score = 72.0 bits (175), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 60/198 (30%), Positives = 87/198 (43%), Gaps = 13/198 (6%)

Query: 217 PCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA 276
           P   V+A  + T  L   G V   G N  GQLG+G   DR TP  +  L    SV+ +AA
Sbjct: 145 PAPAVSAAGDHTLALRRDGTVWAWGFNGSGQLGNGTATDRATPVQVPGLT---SVMAVAA 201

Query: 277 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS------A 330
             ++ LA+  +G V+++G      LG G +     P  +Q     G+  +         A
Sbjct: 202 SEAHSLALRSDGTVWAWGDNGYGQLGDGTKAQRTTP--VQVLGLAGVTALAAGGNGTTVA 259

Query: 331 GDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVL 390
              H +AL S G V+ WG    G LG G   ++  P  +  L S  A  + A    +  L
Sbjct: 260 ISAHSLALRSDGTVWAWGDNSAGQLGDGTTTERATPVQVLGLTSVTA--LAAGAFHSLAL 317

Query: 391 VDTGSVYGFGWMGFGSLG 408
            D G+V+ +G    G LG
Sbjct: 318 RDDGTVWAWGNNSSGQLG 335


>gi|115373190|ref|ZP_01460491.1| BNR repeat domain protein [Stigmatella aurantiaca DW4/3-1]
 gi|115369791|gb|EAU68725.1| BNR repeat domain protein [Stigmatella aurantiaca DW4/3-1]
          Length = 859

 Score =  116 bits (290), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 120/383 (31%), Positives = 171/383 (44%), Gaps = 42/383 (10%)

Query: 122 HTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
           HTL L  + +V++ G +  G LG+G  T +    T +  P    V+ V+ASE H+  +  
Sbjct: 154 HTLALRRDGTVWAWGFNGSGQLGNGTATDRA---TPVQVPGLTSVMAVAASEAHSLALRS 210

Query: 181 SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF------LTIR 234
            G V+  GDN     G   T      P  V  L GV    + AG N T        L +R
Sbjct: 211 DGTVWAWGDNGYGQLGD-GTKAQRTTPVQVLGLAGVTA--LAAGGNGTTVAISAHSLALR 267

Query: 235 --GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
             G V   G N+ GQLG G T +R TP  +  L    SV  +AAG  + LA+  +G V++
Sbjct: 268 SDGTVWAWGDNSAGQLGDGTTTERATPVQVLGLT---SVTALAAGAFHSLALRDDGTVWA 324

Query: 293 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGD-------EHVVALDSSGYVY 345
           +G+ S+  LG G      +P  +Q      +  V    GD       +H +AL S G V+
Sbjct: 325 WGNNSSGQLGDGTT--TARPTPVQVPGLTSVIAVAAGGGDDSLGMRGDHSLALKSDGTVW 382

Query: 346 TWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFG 405
            WG       G G    +T P  +S L    A  + A      VL   G+V+ +G    G
Sbjct: 383 AWGYNLSRQFGDGMPATRTTPVQVSELTGGTA--LVAGDLHAVVLKSDGTVWAWGDNSSG 440

Query: 406 SLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHD 465
            LG    GV+    +P  +  L A  ++ ++TG  H+V V   G ++ +GDN R QLG  
Sbjct: 441 QLG---EGVTPVRAKPMQVSGLAA--ITALATGDGHSVAVGSDGGIWAWGDNRRGQLGI- 494

Query: 466 TLRGCLEPTEIFIQEMEEDTGLA 488
              G     EI +Q     TGLA
Sbjct: 495 ---GITATREIPVQA----TGLA 510



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 98/367 (26%), Positives = 158/367 (43%), Gaps = 23/367 (6%)

Query: 112 GNMQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSA 170
           G   +  G  H +++ S+ +V++ G +  G LG G      V    +     A +  ++ 
Sbjct: 411 GGTALVAGDLHAVVLKSDGTVWAWGDNSSGQLGEG---VTPVRAKPMQVSGLAAITALAT 467

Query: 171 SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
            + H+  V   G ++  GDN     G   T     R   V+A        + AG + +  
Sbjct: 468 GDGHSVAVGSDGGIWAWGDNRRGQLGIGIT---ATREIPVQATGLASISALAAGDSHSLA 524

Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 290
           L   G V T GSN +GQLG G  +DR T   +  L ++     +AAG  + LA+  +G V
Sbjct: 525 LRGNGSVWTWGSNAYGQLGDGTAIDRATAAQVPGLTDI---TALAAGNHHSLALRNDGTV 581

Query: 291 YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVR-VSAGDEHVVALDSSGYVYTWGK 349
           + +GS     LG G       P      +  G+  +R V AG  H VA+  +G V+ WG 
Sbjct: 582 WVWGSNDFGQLGDGTVTSRKTP-----VQVSGLSAMRAVEAGPAHSVAVHLNGTVWVWGN 636

Query: 350 GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGF 409
              G LG G    + +P  +S L    AV V      +  L + G+++ +G+   G LG 
Sbjct: 637 NDFGQLGDGTVTSRAMPVQVSGLTGVTAVAVGV--YHSLALRNDGTLWAWGYNNVGQLGN 694

Query: 410 PDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG 469
              G+      P  +  L    V  ++ G  H++ +   G ++G+G N   QLG  T   
Sbjct: 695 GTSGIQST---PAQVPGLTG--VIALAAGNGHSLALRTDGTVWGWGANSFGQLGDGTTTP 749

Query: 470 CLEPTEI 476
              PT++
Sbjct: 750 RSTPTQV 756



 Score = 91.7 bits (226), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 99/373 (26%), Positives = 162/373 (43%), Gaps = 34/373 (9%)

Query: 116 ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE-- 172
           +  G +H+L L  + +V++ G++  G LG G  T +    T +  P    V+ V+A    
Sbjct: 306 LAAGAFHSLALRDDGTVWAWGNNSSGQLGDGTTTARP---TPVQVPGLTSVIAVAAGGGD 362

Query: 173 -------NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 225
                  +H+  +   G V+  G N S   G      P  R   V+  +      + AG 
Sbjct: 363 DSLGMRGDHSLALKSDGTVWAWGYNLSRQFGD---GMPATRTTPVQVSELTGGTALVAGD 419

Query: 226 NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 285
                L   G V   G N+ GQLG G T  R  P  ++ L    ++  +A G  + +AV 
Sbjct: 420 LHAVVLKSDGTVWAWGDNSSGQLGEGVTPVRAKPMQVSGLA---AITALATGDGHSVAVG 476

Query: 286 GNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVY 345
            +G ++++G      LG G       P  +Q      I  +  +AGD H +AL  +G V+
Sbjct: 477 SDGGIWAWGDNRRGQLGIGITATREIP--VQATGLASISAL--AAGDSHSLALRGNGSVW 532

Query: 346 TWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFG 405
           TWG    G LG G  ID+     +  L    A  + A    +  L + G+V+ +G   FG
Sbjct: 533 TWGSNAYGQLGDGTAIDRATAAQVPGLTDITA--LAAGNHHSLALRNDGTVWVWGSNDFG 590

Query: 406 SLGFPDRGVSDKVLRPRI--LDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 463
            LG  D  V+ +    ++  L ++RA     +  G  H+V V   G ++ +G+N+  QLG
Sbjct: 591 QLG--DGTVTSRKTPVQVSGLSAMRA-----VEAGPAHSVAVHLNGTVWVWGNNDFGQLG 643

Query: 464 HDTLRGCLEPTEI 476
             T+     P ++
Sbjct: 644 DGTVTSRAMPVQV 656



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 93/362 (25%), Positives = 157/362 (43%), Gaps = 21/362 (5%)

Query: 116 ITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           + TG  H++ + S+  +++ G +  G LG G   T+ +          A +  ++A ++H
Sbjct: 465 LATGDGHSVAVGSDGGIWAWGDNRRGQLGIGITATREIPVQATGL---ASISALAAGDSH 521

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 234
           +  +  +G V+T G N     G       I R    +         + AG + +  L   
Sbjct: 522 SLALRGNGSVWTWGSN---AYGQLGDGTAIDRATAAQVPGLTDITALAAGNHHSLALRND 578

Query: 235 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 294
           G V   GSN  GQLG G    R TP  ++ L  + +V    AGP++ +AV  NG V+ +G
Sbjct: 579 GTVWVWGSNDFGQLGDGTVTSRKTPVQVSGLSAMRAV---EAGPAHSVAVHLNGTVWVWG 635

Query: 295 SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGA 354
           +     LG G       P  +Q     G+  V V  G  H +AL + G ++ WG    G 
Sbjct: 636 NNDFGQLGDGTVTSRAMP--VQVSGLTGVTAVAV--GVYHSLALRNDGTLWAWGYNNVGQ 691

Query: 355 LGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGV 414
           LG+G    ++ P  +  L   +A+   A    +  L   G+V+G+G   FG LG    G 
Sbjct: 692 LGNGTSGIQSTPAQVPGLTGVIAL--AAGNGHSLALRTDGTVWGWGANSFGQLG---DGT 746

Query: 415 SDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPT 474
           +     P  +  L   +V  ++ G ++TV +     ++ +G     QLG  T+     P 
Sbjct: 747 TTPRSTPTQVPGLT--NVIALNAGAFYTVALRSERSVWEWGSKSAGQLGDGTVTQKTTPV 804

Query: 475 EI 476
           ++
Sbjct: 805 QV 806



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 98/364 (26%), Positives = 159/364 (43%), Gaps = 25/364 (6%)

Query: 116 ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           +  G  H+L L  N SV++ GS+  G LG G   T     T    P    +  ++A  +H
Sbjct: 515 LAAGDSHSLALRGNGSVWTWGSNAYGQLGDG---TAIDRATAAQVPGLTDITALAAGNHH 571

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRD-TNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
           +  +   G V+  G N     G    T+R    P  V  L  +  + V AG   +  + +
Sbjct: 572 SLALRNDGTVWVWGSNDFGQLGDGTVTSRKT--PVQVSGLSAM--RAVEAGPAHSVAVHL 627

Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
            G V   G+N  GQLG G    R  P  ++ L     V  +A G  + LA+  +G ++++
Sbjct: 628 NGTVWVWGNNDFGQLGDGTVTSRAMPVQVSGLT---GVTAVAVGVYHSLALRNDGTLWAW 684

Query: 294 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 353
           G  +   LG+G    +  P  +         V+ ++AG+ H +AL + G V+ WG    G
Sbjct: 685 GYNNVGQLGNGTSGIQSTPAQVPGL----TGVIALAAGNGHSLALRTDGTVWGWGANSFG 740

Query: 354 ALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRG 413
            LG G    ++ P  +  L + +A+   A    T  L    SV+ +G    G LG  D  
Sbjct: 741 QLGDGTTTPRSTPTQVPGLTNVIALNAGA--FYTVALRSERSVWEWGSKSAGQLG--DGT 796

Query: 414 VSDKVLRPRILDSLRAHHVSQISTGLYHTVVV-TDRGRLFGFGDNERAQLGHDTLRGCLE 472
           V+ K   P  +  L    V+ ++ G  H + + TDR  ++ +G N+R Q+G  T      
Sbjct: 797 VTQKT-TPVQVSGLT--DVTALAAGNAHALALRTDR-TVWAWGGNQRGQIGDGTASIMPA 852

Query: 473 PTEI 476
           P  +
Sbjct: 853 PVNV 856



 Score = 79.0 bits (193), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 87/327 (26%), Positives = 131/327 (40%), Gaps = 36/327 (11%)

Query: 168 VSASENHAAFVLQSGQVFTCGDNSSFCCGH---RDTNRPIFRPRLVEALKGVPCKQVTAG 224
           VSA+ +H   + + G V+  G N S   G+    D   P+  P L   +       V A 
Sbjct: 148 VSAAGDHTLALRRDGTVWAWGFNGSGQLGNGTATDRATPVQVPGLTSVMA------VAAS 201

Query: 225 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEV--------GSVVQIAA 276
              +  L   G V   G N +GQLG G    R TP  +  L  V        G+ V I+A
Sbjct: 202 EAHSLALRSDGTVWAWGDNGYGQLGDGTKAQRTTPVQVLGLAGVTALAAGGNGTTVAISA 261

Query: 277 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVV 336
              + LA+  +G V+++G  S   LG G   +   P  +         V  ++AG  H +
Sbjct: 262 ---HSLALRSDGTVWAWGDNSAGQLGDGTTTERATPVQVLGL----TSVTALAAGAFHSL 314

Query: 337 ALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCA-------RKRKTFV 389
           AL   G V+ WG    G LG G    +  P  +  L S +AV           R   +  
Sbjct: 315 ALRDDGTVWAWGNNSSGQLGDGTTTARPTPVQVPGLTSVIAVAAGGGDDSLGMRGDHSLA 374

Query: 390 LVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRG 449
           L   G+V+ +G+    S  F D G+      P  +  L     + +  G  H VV+   G
Sbjct: 375 LKSDGTVWAWGYN--LSRQFGD-GMPATRTTPVQVSELTGG--TALVAGDLHAVVLKSDG 429

Query: 450 RLFGFGDNERAQLGHDTLRGCLEPTEI 476
            ++ +GDN   QLG        +P ++
Sbjct: 430 TVWAWGDNSSGQLGEGVTPVRAKPMQV 456



 Score = 72.0 bits (175), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 60/198 (30%), Positives = 87/198 (43%), Gaps = 13/198 (6%)

Query: 217 PCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA 276
           P   V+A  + T  L   G V   G N  GQLG+G   DR TP  +  L    SV+ +AA
Sbjct: 144 PAPAVSAAGDHTLALRRDGTVWAWGFNGSGQLGNGTATDRATPVQVPGLT---SVMAVAA 200

Query: 277 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS------A 330
             ++ LA+  +G V+++G      LG G +     P  +Q     G+  +         A
Sbjct: 201 SEAHSLALRSDGTVWAWGDNGYGQLGDGTKAQRTTP--VQVLGLAGVTALAAGGNGTTVA 258

Query: 331 GDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVL 390
              H +AL S G V+ WG    G LG G   ++  P  +  L S  A  + A    +  L
Sbjct: 259 ISAHSLALRSDGTVWAWGDNSAGQLGDGTTTERATPVQVLGLTSVTA--LAAGAFHSLAL 316

Query: 391 VDTGSVYGFGWMGFGSLG 408
            D G+V+ +G    G LG
Sbjct: 317 RDDGTVWAWGNNSSGQLG 334


>gi|315645418|ref|ZP_07898542.1| hypothetical protein PVOR_07930 [Paenibacillus vortex V453]
 gi|315278896|gb|EFU42206.1| hypothetical protein PVOR_07930 [Paenibacillus vortex V453]
          Length = 667

 Score =  116 bits (290), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 104/380 (27%), Positives = 168/380 (44%), Gaps = 32/380 (8%)

Query: 115 QITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAH----VVQVS 169
           ++  G YHT  L+S+  V+  G    G +G         ++   N P  A     V+ + 
Sbjct: 38  KLVAGYYHTASLVSSGDVYVWGQGDRGQIGD-------AAWNARNTPVQARGLNDVMDIH 90

Query: 170 ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
                   +   G V+T G N +   G   T      P  V  L G+  K ++ GL +  
Sbjct: 91  TGVRSTMALRSDGTVWTWGSNENGQLGIGTTADKNV-PTPVSGLSGI--KAISGGLGYHS 147

Query: 230 F-LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG 288
             LT  G V T G N +G+LG+G T+ + +P  +  L +V     IAAG  Y LA+  +G
Sbjct: 148 MALTENGTVWTWGKNDNGELGNGTTVQQNSPVLVIGLSDV---TAIAAGGYYSLALKSDG 204

Query: 289 VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 348
            ++++G+  N  LG G   D+  P  +         V+ ++AG  H +A+   G V+ WG
Sbjct: 205 TIWAWGANGNGELGDGTIVDKHTPVQVSGLS----DVIAITAGGSHSLAIKQDGTVWAWG 260

Query: 349 KGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLG 408
               G LG G   ++T+P  + +L+ H+   +      +  L   G+V+G+G    G LG
Sbjct: 261 INMYGTLGDGTRTNRTIPVKVRNLQ-HIKA-IAGGGHHSLALDQEGNVWGWGDNSRGQLG 318

Query: 409 FPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLR 468
               G +     P  L  +   HV  I+ G +H+  +   GR++G+G N   Q+G  T  
Sbjct: 319 L---GHNSSRTTPEQLTGI--EHVLDIAGGGFHSAALKKDGRVWGWGLNSSGQIGDGTRN 373

Query: 469 GCLEP--TEIFIQEMEEDTG 486
               P  T+  +     DTG
Sbjct: 374 DRNAPALTKAVLDTTAPDTG 393



 Score = 96.7 bits (239), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 84/296 (28%), Positives = 140/296 (47%), Gaps = 15/296 (5%)

Query: 114 MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           M I TG   T+ L S+ +V++ GS+  G LG G    + V  T ++  S    +      
Sbjct: 87  MDIHTGVRSTMALRSDGTVWTWGSNENGQLGIGTTADKNVP-TPVSGLSGIKAISGGLGY 145

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            H+  + ++G V+T G N +   G+  T +    P LV  L  V    + AG  ++  L 
Sbjct: 146 -HSMALTENGTVWTWGKNDNGELGNGTTVQQ-NSPVLVIGLSDVTA--IAAGGYYSLALK 201

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
             G +   G+N +G+LG G  +D+ TP  ++ L +V   + I AG S+ LA+  +G V++
Sbjct: 202 SDGTIWAWGANGNGELGDGTIVDKHTPVQVSGLSDV---IAITAGGSHSLAIKQDGTVWA 258

Query: 293 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 352
           +G      LG G + +   P  ++  +    H+  ++ G  H +ALD  G V+ WG    
Sbjct: 259 WGINMYGTLGDGTRTNRTIPVKVRNLQ----HIKAIAGGGHHSLALDQEGNVWGWGDNSR 314

Query: 353 GALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLG 408
           G LG G    +T PE L+ ++  L   +      +  L   G V+G+G    G +G
Sbjct: 315 GQLGLGHNSSRTTPEQLTGIEHVL--DIAGGGFHSAALKKDGRVWGWGLNSSGQIG 368


>gi|114595105|ref|XP_001160851.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 isoform 2
           [Pan troglodytes]
          Length = 1020

 Score =  116 bits (290), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 89/274 (32%), Positives = 130/274 (47%), Gaps = 8/274 (2%)

Query: 193 FCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGD 252
           FC G   T+    + R      G    Q  +G   +  L     V +CG N+ GQLG   
Sbjct: 3   FCWG---TDSRELQRRRTAGSPGAELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRG 59

Query: 253 TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGE-QHDELQ 311
                 P+ I  LE + +V  ++ G  + LAV   G V+++G+GS   LG GE +     
Sbjct: 60  AQRGELPEPIQALETL-TVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFT 118

Query: 312 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEI-DKTLPEPLS 370
           P+ I T    GI +++VS G  H +AL     V++WGK   G LG G E   +  P+ + 
Sbjct: 119 PKKITTL--NGIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEFPSQASPQRVR 176

Query: 371 SLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAH 430
           SL+     QV A    +F L   G+ +G+G    G L    R V  +  +P  + +L+  
Sbjct: 177 SLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSSGQLALSGRNVPVQSNKPLSVGALKNL 236

Query: 431 HVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 464
            V  IS G  HT V+T  G++F FGDN   QLG+
Sbjct: 237 GVVYISCGDAHTAVLTQDGKVFTFGDNRSGQLGY 270



 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 89/302 (29%), Positives = 147/302 (48%), Gaps = 20/302 (6%)

Query: 163 AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 222
           A ++Q ++ E H+  +L + +V +CGDNS    G R   R    P  ++AL+ +    V+
Sbjct: 23  AELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGEL-PEPIQALETLTVDLVS 81

Query: 223 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRP-TPKSIAPLEEVGSVVQIAAGPSYM 281
            G   +  +  +G V   G+ + GQLG G+  +   TPK I  L  +  ++Q++ G  + 
Sbjct: 82  CGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKITTLNGI-KIIQVSCGHYHS 140

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQH-DELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 340
           LA++ +  V+S+G  S+  LG G++   +  P+ +++   +GI + +V+AG  H  AL  
Sbjct: 141 LALSKDSQVFSWGKNSHGQLGLGKEFPSQASPQRVRSL--EGIPLAQVAAGGAHSFALSL 198

Query: 341 SGYVYTWGKGYCGAL---GHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVY 397
            G  + WG    G L   G    +    P  + +LK+   V +      T VL   G V+
Sbjct: 199 CGTSFGWGSNSSGQLALSGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGKVF 258

Query: 398 GFGWMGFGSLGF---PDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV-VTDRGRLFG 453
            FG    G LG+   P++     V R   +D L    VSQI  G YHT+  V   G++  
Sbjct: 259 TFGDNRSGQLGYSPTPEKRGPQLVER---IDGL----VSQIDCGSYHTLAYVHTTGQVVS 311

Query: 454 FG 455
           FG
Sbjct: 312 FG 313



 Score = 91.3 bits (225), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 80/297 (26%), Positives = 132/297 (44%), Gaps = 19/297 (6%)

Query: 114 MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHV 165
           +Q  +G  H+LL+ +N  V SCG +  G LG         PE  Q +    ++       
Sbjct: 26  LQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGELPEPIQALETLTVDL------ 79

Query: 166 VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 225
             VS  + H+  V   G+VF  G  S    G  +     F P+ +  L G+   QV+ G 
Sbjct: 80  --VSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKITTLNGIKIIQVSCGH 137

Query: 226 NFTGFLTIRGHVHTCGSNTHGQLGHGDTL-DRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 284
             +  L+    V + G N+HGQLG G     + +P+ +  LE +  + Q+AAG ++  A+
Sbjct: 138 YHSLALSKDSQVFSWGKNSHGQLGLGKEFPSQASPQRVRSLEGI-PLAQVAAGGAHSFAL 196

Query: 285 TGNGVVYSFGSGSNFCLGHGEQHDELQP-RAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 343
           +  G  + +GS S+  L    ++  +Q  + +     K + VV +S GD H   L   G 
Sbjct: 197 SLCGTSFGWGSNSSGQLALSGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGK 256

Query: 344 VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 400
           V+T+G    G LG+    +K  P+ +  +   ++   C        +  TG V  FG
Sbjct: 257 VFTFGDNRSGQLGYSPTPEKRGPQLVERIDGLVSQIDCGSYHTLAYVHTTGQVVSFG 313


>gi|408500684|ref|YP_006864603.1| RCC1 domain-containing protein [Bifidobacterium asteroides PRL2011]
 gi|408465508|gb|AFU71037.1| RCC1 domain-containing protein [Bifidobacterium asteroides PRL2011]
          Length = 1173

 Score =  115 bits (289), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 101/358 (28%), Positives = 154/358 (43%), Gaps = 20/358 (5%)

Query: 115  QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
            Q   G  H+  + S+ S+++ G +  G LG           ++   P+    V VSA   
Sbjct: 712  QADGGDLHSAAVGSDGSLYTWGDNSHGQLGRDTADKPDSHPSKAEAPAGVTFVHVSAGYG 771

Query: 174  HAAFVLQSGQVFTCGDNSSFCCGHRDT-NRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
             +  +   G +++ GDNS    G   T N P  RP  VEA  G+   Q +AG +    L+
Sbjct: 772  FSVALASDGSLYSWGDNSRGQLGRTVTSNNPANRPHKVEAPAGITFVQASAGGSHVVALS 831

Query: 233  IRGHVHTCGSNTHGQLGHGDTLDRPTPKS-IAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
              G+++T G N+ GQLG   T + P  K   A      +   ++AG  + +AV   G VY
Sbjct: 832  SDGNIYTWGDNSAGQLGRTVTSNNPADKPGKADTPADVTFTSVSAGQGHTVAVDTQGDVY 891

Query: 292  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 351
            ++G  ++  LG          +  +     GI   + SAG+ H VA+   G +YTWG   
Sbjct: 892  TWGDNTHGELGRSTTSTPAD-KPGKADTPAGITFTQASAGESHSVAVSDDGSIYTWGDTA 950

Query: 352  CGALGHGDEI---DKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLG 408
             G LG    I   DK  P    +       Q  A  + +  L   GS+Y +G  G  S G
Sbjct: 951  NGRLGRDTNITPADK--PGKADTPAGVTFTQASAGGKHSIALGSDGSLYTWGDSGKTSAG 1008

Query: 409  FPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDT 466
                       RP  +D+      +Q S G  + + +   G L+ +GDN + QLG DT
Sbjct: 1009 -----------RPNKVDTPAGITFTQASAGASYCLALGSDGNLYSWGDNAKGQLGRDT 1055



 Score =  112 bits (281), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 94/328 (28%), Positives = 150/328 (45%), Gaps = 16/328 (4%)

Query: 144  HGPETT-QCVSFTRINFPSAAHVVQVSASEN---HAAFVLQSGQVFTCGDNSSFCCGHRD 199
            +GPE+  Q V+ T    P  A  +++S ++    H+A V   G ++T GDNS    G   
Sbjct: 689  NGPESGGQTVTLT----PPPARGIRISQADGGDLHSAAVGSDGSLYTWGDNSHGQLGRDT 744

Query: 200  TNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTP 259
             ++P   P   EA  GV    V+AG  F+  L   G +++ G N+ GQLG   T + P  
Sbjct: 745  ADKPDSHPSKAEAPAGVTFVHVSAGYGFSVALASDGSLYSWGDNSRGQLGRTVTSNNPAN 804

Query: 260  KSIAPLEEVG-SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTF 318
            +        G + VQ +AG S+++A++ +G +Y++G  S   LG     +    +  +  
Sbjct: 805  RPHKVEAPAGITFVQASAGGSHVVALSSDGNIYTWGDNSAGQLGRTVTSNNPADKPGKAD 864

Query: 319  RRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH---GDEIDKTLPEPLSSLKSH 375
                +    VSAG  H VA+D+ G VYTWG    G LG        DK  P    +    
Sbjct: 865  TPADVTFTSVSAGQGHTVAVDTQGDVYTWGDNTHGELGRSTTSTPADK--PGKADTPAGI 922

Query: 376  LAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQI 435
               Q  A +  +  + D GS+Y +G    G LG  D  ++    +P   D+      +Q 
Sbjct: 923  TFTQASAGESHSVAVSDDGSIYTWGDTANGRLGR-DTNIT-PADKPGKADTPAGVTFTQA 980

Query: 436  STGLYHTVVVTDRGRLFGFGDNERAQLG 463
            S G  H++ +   G L+ +GD+ +   G
Sbjct: 981  SAGGKHSIALGSDGSLYTWGDSGKTSAG 1008



 Score = 88.2 bits (217), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 81/329 (24%), Positives = 141/329 (42%), Gaps = 24/329 (7%)

Query: 157 INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGH-------RDTNRPIFRPRL 209
           +N P+  H  QVS    H   +   G +++ G+N+    G        +D  +   +P+L
Sbjct: 212 VNPPTGVHFTQVSTGYTHFLAIGSDGNLYSWGNNADGELGRETVSTTPKDNPQIDNQPKL 271

Query: 210 VEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGH--GDTLDRPTPKSIAPLEE 267
           V    GV   Q  AG   +  L   G++++ G N +G+LG   G  +    P  +   + 
Sbjct: 272 VTPPAGVHFTQACAGKWHSLALGSDGNLYSWGENKYGELGRDTGSAIYDVKPGKVNLPKG 331

Query: 268 VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH---GEQHDELQPRAIQTFRRKGIH 324
           +  + QI+AG  Y +A+  +G +YS+G  +   LG    G    +  PR + T       
Sbjct: 332 ITKITQISAGTFYSMALDSDGDLYSWGDNTYDELGRYAGGYPFRDRSPRKM-TMPAGVKK 390

Query: 325 VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG------DEIDKTLPEPLSSLKSHLAV 378
              + AG+   +A  S G +Y+WG    G LG        D   + +  P    K     
Sbjct: 391 FTWIKAGEWTSLATSSDGSLYSWGWNEYGQLGRNTAPARQDRTPRKVTMPAGVTK---FT 447

Query: 379 QVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRP-RILDSLRAHHVSQIST 437
           +V A  R +  L   G++Y +G      LG  D G +   ++P ++         +++S 
Sbjct: 448 KVSAEHRHSLALGSDGNLYSWGLNDCKQLGR-DTGSAKYDVKPGKVPTPAGVAQFTEVSA 506

Query: 438 GLYHTVVVTDRGRLFGFGDNERAQLGHDT 466
           G  H++ +   G L+ +G N+  +LG  T
Sbjct: 507 GYSHSLAIGSDGNLYSWGQNKYGELGRPT 535



 Score = 86.3 bits (212), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 93/349 (26%), Positives = 148/349 (42%), Gaps = 42/349 (12%)

Query: 146 PETTQCVSFTRINF-PSAAHVVQ----VSASENHAAFVLQSGQVFTCGDNSSFCCGHRDT 200
           P + +   +TRI   P     ++    V A E  +  +   G ++  GDN+       D 
Sbjct: 146 PTSGKATEYTRITLTPPTTPDIRFSHIVPAKEEGSQAIASDGNLYRWGDNNYKLGTPEDE 205

Query: 201 NRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPT 258
            R    P LV    GV   QV+ G  +T FL I   G++++ G+N  G+LG       P 
Sbjct: 206 KR---TPSLVNPPTGVHFTQVSTG--YTHFLAIGSDGNLYSWGNNADGELGRETVSTTPK 260

Query: 259 --------PKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH--GEQHD 308
                   PK + P   V    Q  AG  + LA+  +G +YS+G      LG   G    
Sbjct: 261 DNPQIDNQPKLVTPPAGV-HFTQACAGKWHSLALGSDGNLYSWGENKYGELGRDTGSAIY 319

Query: 309 ELQPRAIQTFRRKGI-HVVRVSAGDEHVVALDSSGYVYTWGKG-------YCGALGHGDE 360
           +++P  +     KGI  + ++SAG  + +ALDS G +Y+WG         Y G     D 
Sbjct: 320 DVKPGKVNL--PKGITKITQISAGTFYSMALDSDGDLYSWGDNTYDELGRYAGGYPFRDR 377

Query: 361 IDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLG---FPDRGVSDK 417
             + +  P    K      + A +  +      GS+Y +GW  +G LG    P R   D+
Sbjct: 378 SPRKMTMPAGVKK---FTWIKAGEWTSLATSSDGSLYSWGWNEYGQLGRNTAPAR--QDR 432

Query: 418 VLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDT 466
             R ++         +++S    H++ +   G L+ +G N+  QLG DT
Sbjct: 433 TPR-KVTMPAGVTKFTKVSAEHRHSLALGSDGNLYSWGLNDCKQLGRDT 480



 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 72/273 (26%), Positives = 123/273 (45%), Gaps = 21/273 (7%)

Query: 100 VEHSSDIVETSAGN--MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQC---VS 153
           +++   +V   AG    Q   G++H+L + S+ +++S G +  G LG   +T      V 
Sbjct: 265 IDNQPKLVTPPAGVHFTQACAGKWHSLALGSDGNLYSWGENKYGELGR--DTGSAIYDVK 322

Query: 154 FTRINFPSA-AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFR---PRL 209
             ++N P     + Q+SA   ++  +   G +++ GDN+    G      P FR   PR 
Sbjct: 323 PGKVNLPKGITKITQISAGTFYSMALDSDGDLYSWGDNTYDELGRYAGGYP-FRDRSPRK 381

Query: 210 VEALKGVPCKQVTAGLNFTGFLTIR-GHVHTCGSNTHGQLGHGDTLDRP--TPKSIAPLE 266
           +    GV          +T   T   G +++ G N +GQLG      R   TP+ +    
Sbjct: 382 MTMPAGVKKFTWIKAGEWTSLATSSDGSLYSWGWNEYGQLGRNTAPARQDRTPRKVTMPA 441

Query: 267 EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH--GEQHDELQPRAIQTFRRKGI- 323
            V    +++A   + LA+  +G +YS+G      LG   G    +++P  + T    G+ 
Sbjct: 442 GVTKFTKVSAEHRHSLALGSDGNLYSWGLNDCKQLGRDTGSAKYDVKPGKVPT--PAGVA 499

Query: 324 HVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 356
               VSAG  H +A+ S G +Y+WG+   G LG
Sbjct: 500 QFTEVSAGYSHSLAIGSDGNLYSWGQNKYGELG 532



 Score = 41.6 bits (96), Expect = 1.00,   Method: Compositional matrix adjust.
 Identities = 23/88 (26%), Positives = 46/88 (52%), Gaps = 5/88 (5%)

Query: 380 VCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGL 439
           V A++  +  +   G++Y +G   +  LG P+    D+   P +++     H +Q+STG 
Sbjct: 173 VPAKEEGSQAIASDGNLYRWGDNNY-KLGTPE----DEKRTPSLVNPPTGVHFTQVSTGY 227

Query: 440 YHTVVVTDRGRLFGFGDNERAQLGHDTL 467
            H + +   G L+ +G+N   +LG +T+
Sbjct: 228 THFLAIGSDGNLYSWGNNADGELGRETV 255


>gi|449676845|ref|XP_002166895.2| PREDICTED: uncharacterized protein LOC100213911, partial [Hydra
           magnipapillata]
          Length = 725

 Score =  115 bits (289), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 88/316 (27%), Positives = 153/316 (48%), Gaps = 17/316 (5%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNS--SFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 222
           VV+++  + H+A V +SG+++  G N       GH    + + +P  V+ LK    ++V 
Sbjct: 40  VVEMACGDEHSAVVTESGRLYVFGSNDWGQLGLGHT---KSLNKPSFVKPLKPEKVRKVA 96

Query: 223 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 282
            G N T   +  G + + G N  GQLGH D  +   PK I  + ++  + QIA G  + +
Sbjct: 97  CGRNHTIVYSESGKLFSFGCNEDGQLGHVDKENELLPKEIESIPQM-EIKQIACGTYHSI 155

Query: 283 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
            ++ +G VY +G+ +   LG GE+ +   P+ ++ F+++   VV VS G  H   +   G
Sbjct: 156 ILSEDGDVYVWGNNNEGQLGLGEEVENSLPKKLK-FKKE---VVSVSCGYYHTALVTRDG 211

Query: 343 YVYTWGKGYCGALGHGDE--IDKTLPEPLS-SLKSHLAVQVCARKRKTFVLVDTGSVYGF 399
           ++YT+G+   G LG       + T+P+ ++    +   + V    R T  +   G  Y +
Sbjct: 212 FLYTFGENELGKLGLSSSQLSNTTVPQSVAMPADNDEYISVSCGARHTVAITKQGHCYAW 271

Query: 400 GWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNER 459
           G    G LG   + +  +V  P+ +  L       +S G  HT VVT+ G++F FGD   
Sbjct: 272 GDGSQGQLGHGTKLL--EVNEPKQIKKLSGQKCISVSCGESHTAVVTESGKVFTFGDGRH 329

Query: 460 AQLGH--DTLRGCLEP 473
            +LG   D+     +P
Sbjct: 330 GKLGQGEDSFSNSFDP 345



 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 76/258 (29%), Positives = 126/258 (48%), Gaps = 6/258 (2%)

Query: 220 QVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPS 279
           ++  G   +  +T  G ++  GSN  GQLG G T     P  + PL+    V ++A G +
Sbjct: 42  EMACGDEHSAVVTESGRLYVFGSNDWGQLGLGHTKSLNKPSFVKPLK-PEKVRKVACGRN 100

Query: 280 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 339
           + +  + +G ++SFG   +  LGH ++ +EL P+ I++  +  + + +++ G  H + L 
Sbjct: 101 HTIVYSESGKLFSFGCNEDGQLGHVDKENELLPKEIESIPQ--MEIKQIACGTYHSIILS 158

Query: 340 SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGF 399
             G VY WG    G LG G+E++ +LP+ L   K  ++V  C       V  D G +Y F
Sbjct: 159 EDGDVYVWGNNNEGQLGLGEEVENSLPKKLKFKKEVVSVS-CGYYHTALVTRD-GFLYTF 216

Query: 400 GWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNER 459
           G    G LG     +S+  +   +           +S G  HTV +T +G  + +GD  +
Sbjct: 217 GENELGKLGLSSSQLSNTTVPQSVAMPADNDEYISVSCGARHTVAITKQGHCYAWGDGSQ 276

Query: 460 AQLGHDT-LRGCLEPTEI 476
            QLGH T L    EP +I
Sbjct: 277 GQLGHGTKLLEVNEPKQI 294



 Score =  108 bits (270), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 96/365 (26%), Positives = 165/365 (45%), Gaps = 19/365 (5%)

Query: 112 GNMQITTGRYHTLLISNS-SVFSCGSSLCGVLGHG-PETTQCVSFTRINFPSAAHVVQVS 169
           G +++  G  H+ +++ S  ++  GS+  G LG G  ++    SF +   P    V +V+
Sbjct: 39  GVVEMACGDEHSAVVTESGRLYVFGSNDWGQLGLGHTKSLNKPSFVKPLKPEK--VRKVA 96

Query: 170 ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
              NH     +SG++F+ G N     GH D    +  P+ +E++  +  KQ+  G   + 
Sbjct: 97  CGRNHTIVYSESGKLFSFGCNEDGQLGHVDKENELL-PKEIESIPQMEIKQIACGTYHSI 155

Query: 230 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 289
            L+  G V+  G+N  GQLG G+ ++   PK +   +E   VV ++ G  +   VT +G 
Sbjct: 156 ILSEDGDVYVWGNNNEGQLGLGEEVENSLPKKLKFKKE---VVSVSCGYYHTALVTRDGF 212

Query: 290 VYSFGSGS--NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 347
           +Y+FG        L   +  +   P+++          + VS G  H VA+   G+ Y W
Sbjct: 213 LYTFGENELGKLGLSSSQLSNTTVPQSV-AMPADNDEYISVSCGARHTVAITKQGHCYAW 271

Query: 348 GKGYCGALGHGDE-IDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGS 406
           G G  G LGHG + ++   P+ +  L     + V   +  T V+ ++G V+ FG    G 
Sbjct: 272 GDGSQGQLGHGTKLLEVNEPKQIKKLSGQKCISVSCGESHTAVVTESGKVFTFGDGRHGK 331

Query: 407 LGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDT 466
           LG  +   S+    P  L      +V  +S G  HT+V+        F D      G ++
Sbjct: 332 LGQGEDSFSN-SFDPVYLSRFNYFNVVYVSCGGCHTLVLAVHKNKDDFVD------GENS 384

Query: 467 LRGCL 471
           LR  +
Sbjct: 385 LRASM 389



 Score = 75.1 bits (183), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 43/146 (29%), Positives = 73/146 (50%), Gaps = 3/146 (2%)

Query: 318 FRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLA 377
           F  K   VV ++ GDEH   +  SG +Y +G    G LG G       P  +  LK    
Sbjct: 33  FWIKNDGVVEMACGDEHSAVVTESGRLYVFGSNDWGQLGLGHTKSLNKPSFVKPLKPEKV 92

Query: 378 VQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIST 437
            +V   +  T V  ++G ++ FG    G LG  D+   +  L P+ ++S+    + QI+ 
Sbjct: 93  RKVACGRNHTIVYSESGKLFSFGCNEDGQLGHVDK---ENELLPKEIESIPQMEIKQIAC 149

Query: 438 GLYHTVVVTDRGRLFGFGDNERAQLG 463
           G YH++++++ G ++ +G+N   QLG
Sbjct: 150 GTYHSIILSEDGDVYVWGNNNEGQLG 175



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 36/112 (32%), Positives = 59/112 (52%), Gaps = 4/112 (3%)

Query: 372 LKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHH 431
           +K+   V++      + V+ ++G +Y FG   +G LG    G +  + +P  +  L+   
Sbjct: 35  IKNDGVVEMACGDEHSAVVTESGRLYVFGSNDWGQLGL---GHTKSLNKPSFVKPLKPEK 91

Query: 432 VSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI-FIQEME 482
           V +++ G  HT+V ++ G+LF FG NE  QLGH      L P EI  I +ME
Sbjct: 92  VRKVACGRNHTIVYSESGKLFSFGCNEDGQLGHVDKENELLPKEIESIPQME 143


>gi|340375548|ref|XP_003386296.1| PREDICTED: e3 ubiquitin-protein ligase HERC2 [Amphimedon
           queenslandica]
          Length = 4694

 Score =  115 bits (289), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 74/230 (32%), Positives = 121/230 (52%), Gaps = 9/230 (3%)

Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 290
           LT  G V++ G  ++G LG G+T  +  P ++A L     +V I+AG  +  AVT +GV+
Sbjct: 523 LTKDGKVYSWGQGSNGVLGIGNTESQTAPTAVAALSG-DRIVHISAGSMHSAAVTEDGVL 581

Query: 291 YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS--AGDEHVVALDSSGYVYTWG 348
           Y++G GS   LGHG   D+L P  ++     G+ +V+V   +GD H +ALD +G V++WG
Sbjct: 582 YTWGKGSYGRLGHGNAEDKLIPTIVEGL--NGVKIVQVDCGSGDAHTLALDDTGQVWSWG 639

Query: 349 KGYCGALGHGDEIDKTLPEPLSSLKS-HLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSL 407
            G  G LG        +P+P+S + S    V++    + +  L   G +Y +G      L
Sbjct: 640 DGDYGKLGRPGSDQNKVPKPISGIGSTSPVVKIICGNQISMALTKDGKLYSWGCGDTYQL 699

Query: 408 GFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDN 457
           G    G  + V +P++++ L    VS +S G  H V +T    ++ +G N
Sbjct: 700 G---HGNQEHVRQPKLIEGLSETVVSDVSVGAQHCVALTTDSDVYAWGKN 746



 Score =  111 bits (278), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 94/358 (26%), Positives = 158/358 (44%), Gaps = 9/358 (2%)

Query: 127  SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFT 186
            S  SVF  G +  G LG G E  +  S       S  +   ++  E     V   G+V+ 
Sbjct: 3832 STFSVFGWGHNHRGQLG-GIEGNKVKSPRLCESLSELNPAMITGGEQTLFAVTDDGKVYA 3890

Query: 187  CG--DNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT--AGLNFTGFLTIRGHVHTCGS 242
             G   +     G  D N     P    A +G+  K++   +G      +T +G ++  G 
Sbjct: 3891 SGYAAHGRLGIGSSD-NVATPTPLTSLATRGIAVKKIAIHSGGKHCLAVTTQGELYAWGE 3949

Query: 243  NTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLG 302
               G+LG G T++   P  I  L+    V+    G S+   +T +G +Y++G G    LG
Sbjct: 3950 GEDGKLGLGTTVNMNVPHLIESLKS-KHVIDAGCGSSHSACITDDGSLYTWGKGRYGRLG 4008

Query: 303  HGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEID 362
            H +   + +P+ +   + + +  V   +GD   +   +SG V++WG G  G LG G    
Sbjct: 4009 HNDHETQHKPKLVSALKGEQVTCVACGSGDAQTLCATASGCVFSWGDGDYGKLGRGGNEG 4068

Query: 363  KTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPR 422
              +P+ + SL     +++    + +  L   G VY +G   +  LG  D   S +    R
Sbjct: 4069 SKVPKKIDSLTGKHVIKLLCGSQFSMALTTAGHVYTWGKGDYYRLGHGDD--SHQRTPRR 4126

Query: 423  ILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQE 480
            +L  L   +V  I  G  H +V T+ G++F +GDN+  Q+G+DT +    P  I I +
Sbjct: 4127 VLGLLAHENVIDIGCGSLHCIVCTESGKVFSWGDNDEGQIGNDTTQAVSVPKRINITD 4184



 Score =  105 bits (263), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 74/211 (35%), Positives = 106/211 (50%), Gaps = 10/211 (4%)

Query: 271 VVQIAAGPS--YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRV 328
           ++QI   PS  ++LA+T +G VYS+G GSN  LG G    +  P A+      G  +V +
Sbjct: 508 IIQIDHNPSGNHILALTKDGKVYSWGQGSNGVLGIGNTESQTAPTAVAAL--SGDRIVHI 565

Query: 329 SAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQV-CAR-KRK 386
           SAG  H  A+   G +YTWGKG  G LGHG+  DK +P  +  L     VQV C      
Sbjct: 566 SAGSMHSAAVTEDGVLYTWGKGSYGRLGHGNAEDKLIPTIVEGLNGVKIVQVDCGSGDAH 625

Query: 387 TFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSL-RAHHVSQISTGLYHTVVV 445
           T  L DTG V+ +G   +G LG P    SD+   P+ +  +     V +I  G   ++ +
Sbjct: 626 TLALDDTGQVWSWGDGDYGKLGRPG---SDQNKVPKPISGIGSTSPVVKIICGNQISMAL 682

Query: 446 TDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 476
           T  G+L+ +G  +  QLGH       +P  I
Sbjct: 683 TKDGKLYSWGCGDTYQLGHGNQEHVRQPKLI 713



 Score =  105 bits (261), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 91/342 (26%), Positives = 155/342 (45%), Gaps = 28/342 (8%)

Query: 114  MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPS--------AAH 164
            +Q   G   + ++S+   VF+CG    G LG G        F  I  P            
Sbjct: 2961 IQFAGGSKCSFVVSDDGKVFACGEGSSGRLGIG-------GFANIRMPHQISSLSMYVVR 3013

Query: 165  VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
             V VS +  H   V   G+VF+ GD      GH  + +   RP+++E  +    ++V+ G
Sbjct: 3014 KVAVSCAGRHVLAVTADGKVFSWGDGQYGQLGH-GSLQSYDRPKMIEIFQAKHIREVSCG 3072

Query: 225  LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG-SVVQIAAGPSYMLA 283
               +  +++ G + T G    G+LGHGD+ ++  PK +  LE+V  S V   +  ++ LA
Sbjct: 3073 TGHSAAVSVNGELFTWGQGADGRLGHGDSNNQTKPKLVRALEKVRISCVACGSRNAHTLA 3132

Query: 284  VTGNGVVYSFGSGS--NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 341
              G+  ++++G GS     L  G    ++ P  + TF     +++++  G    V L   
Sbjct: 3133 A-GDNSLWAWGDGSFGKLGLKDGSSSTDV-PVQVITFPS---NIIQIECGMHFSVLLTKE 3187

Query: 342  GYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGW 401
            G VYTWGKG    LG+     + +P  +  L S    QV         L  +G VY +G 
Sbjct: 3188 GKVYTWGKGEYYRLGNDSTSVQPIPTLVDGLASKTITQVAVGALHCLALTSSGEVYSWGD 3247

Query: 402  MGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV 443
               G  G  +  + ++  +P+I+ SL+ H + +I+ G  H++
Sbjct: 3248 NEHGQQG-NNSTICNR--KPQIVASLKGHRICKIACGSSHSI 3286



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 77/234 (32%), Positives = 110/234 (47%), Gaps = 6/234 (2%)

Query: 118 TGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAF 177
           +G +   L  +  V+S G    GVLG G   +Q    T +   S   +V +SA   H+A 
Sbjct: 516 SGNHILALTKDGKVYSWGQGSNGVLGIGNTESQTAP-TAVAALSGDRIVHISAGSMHSAA 574

Query: 178 VLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT--AGLNFTGFLTIRG 235
           V + G ++T G  S    GH +    +  P +VE L GV   QV   +G   T  L   G
Sbjct: 575 VTEDGVLYTWGKGSYGRLGHGNAEDKLI-PTIVEGLNGVKIVQVDCGSGDAHTLALDDTG 633

Query: 236 HVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 295
            V + G   +G+LG   +     PK I+ +     VV+I  G    +A+T +G +YS+G 
Sbjct: 634 QVWSWGDGDYGKLGRPGSDQNKVPKPISGIGSTSPVVKIICGNQISMALTKDGKLYSWGC 693

Query: 296 GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 349
           G  + LGHG Q    QP+ I+        V  VS G +H VAL +   VY WGK
Sbjct: 694 GDTYQLGHGNQEHVRQPKLIEGLSE--TVVSDVSVGAQHCVALTTDSDVYAWGK 745



 Score =  101 bits (252), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 79/307 (25%), Positives = 147/307 (47%), Gaps = 12/307 (3%)

Query: 164  HVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT- 222
            H +Q +     +  V   G+VF CG+ SS   G       I  P  + +L     ++V  
Sbjct: 2959 HPIQFAGGSKCSFVVSDDGKVFACGEGSSGRLGIGGFAN-IRMPHQISSLSMYVVRKVAV 3017

Query: 223  --AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 280
              AG +    +T  G V + G   +GQLGHG       PK I  + +   + +++ G  +
Sbjct: 3018 SCAGRHVLA-VTADGKVFSWGDGQYGQLGHGSLQSYDRPKMIE-IFQAKHIREVSCGTGH 3075

Query: 281  MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 340
              AV+ NG ++++G G++  LGHG+ +++ +P+ ++   +  I  V   + + H +A   
Sbjct: 3076 SAAVSVNGELFTWGQGADGRLGHGDSNNQTKPKLVRALEKVRISCVACGSRNAHTLAAGD 3135

Query: 341  SGYVYTWGKGYCGALGHGDEIDKT-LPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGF 399
            +  ++ WG G  G LG  D    T +P  + +  S++ +Q+      + +L   G VY +
Sbjct: 3136 NS-LWAWGDGSFGKLGLKDGSSSTDVPVQVITFPSNI-IQIECGMHFSVLLTKEGKVYTW 3193

Query: 400  GWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNER 459
            G   +  LG     V      P ++D L +  ++Q++ G  H + +T  G ++ +GDNE 
Sbjct: 3194 GKGEYYRLGNDSTSVQPI---PTLVDGLASKTITQVAVGALHCLALTSSGEVYSWGDNEH 3250

Query: 460  AQLGHDT 466
             Q G+++
Sbjct: 3251 GQQGNNS 3257



 Score = 86.3 bits (212), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 67/245 (27%), Positives = 111/245 (45%), Gaps = 5/245 (2%)

Query: 159 FPSAAHVVQV--SASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGV 216
           FP    ++Q+  + S NH   + + G+V++ G  S+   G  +T      P  V AL G 
Sbjct: 502 FPGDEEIIQIDHNPSGNHILALTKDGKVYSWGQGSNGVLGIGNTESQT-APTAVAALSGD 560

Query: 217 PCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSV-VQIA 275
               ++AG   +  +T  G ++T G  ++G+LGHG+  D+  P  +  L  V  V V   
Sbjct: 561 RIVHISAGSMHSAAVTEDGVLYTWGKGSYGRLGHGNAEDKLIPTIVEGLNGVKIVQVDCG 620

Query: 276 AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHV 335
           +G ++ LA+   G V+S+G G    LG         P+ I         VV++  G++  
Sbjct: 621 SGDAHTLALDDTGQVWSWGDGDYGKLGRPGSDQNKVPKPISGIGSTS-PVVKIICGNQIS 679

Query: 336 VALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGS 395
           +AL   G +Y+WG G    LGHG++     P+ +  L   +   V    +    L     
Sbjct: 680 MALTKDGKLYSWGCGDTYQLGHGNQEHVRQPKLIEGLSETVVSDVSVGAQHCVALTTDSD 739

Query: 396 VYGFG 400
           VY +G
Sbjct: 740 VYAWG 744



 Score = 60.8 bits (146), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 41/145 (28%), Positives = 71/145 (48%), Gaps = 7/145 (4%)

Query: 323  IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQV-- 380
            +H ++ + G +    +   G V+  G+G  G LG G   +  +P  +SSL  ++  +V  
Sbjct: 2958 LHPIQFAGGSKCSFVVSDDGKVFACGEGSSGRLGIGGFANIRMPHQISSLSMYVVRKVAV 3017

Query: 381  -CARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGL 439
             CA +    V  D G V+ +G   +G LG    G      RP++++  +A H+ ++S G 
Sbjct: 3018 SCAGRHVLAVTAD-GKVFSWGDGQYGQLG---HGSLQSYDRPKMIEIFQAKHIREVSCGT 3073

Query: 440  YHTVVVTDRGRLFGFGDNERAQLGH 464
             H+  V+  G LF +G     +LGH
Sbjct: 3074 GHSAAVSVNGELFTWGQGADGRLGH 3098



 Score = 52.4 bits (124), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 49/192 (25%), Positives = 87/192 (45%), Gaps = 11/192 (5%)

Query: 114 MQITTGRYHTLLISNSSV-FSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS--A 170
           + I+ G  H+  ++   V ++ G    G LGHG    + +  T +   +   +VQV   +
Sbjct: 563 VHISAGSMHSAAVTEDGVLYTWGKGSYGRLGHGNAEDKLIP-TIVEGLNGVKIVQVDCGS 621

Query: 171 SENHAAFVLQSGQVFTCGDNSSFCCGH--RDTNRPIFRPRLVEALKGV-PCKQVTAGLNF 227
            + H   +  +GQV++ GD      G    D N+    P+ +  +    P  ++  G   
Sbjct: 622 GDAHTLALDDTGQVWSWGDGDYGKLGRPGSDQNK---VPKPISGIGSTSPVVKIICGNQI 678

Query: 228 TGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN 287
           +  LT  G +++ G     QLGHG+      PK I  L E   V  ++ G  + +A+T +
Sbjct: 679 SMALTKDGKLYSWGCGDTYQLGHGNQEHVRQPKLIEGLSET-VVSDVSVGAQHCVALTTD 737

Query: 288 GVVYSFGSGSNF 299
             VY++G  S+F
Sbjct: 738 SDVYAWGKNSSF 749



 Score = 45.8 bits (107), Expect = 0.046,   Method: Compositional matrix adjust.
 Identities = 39/139 (28%), Positives = 61/139 (43%), Gaps = 8/139 (5%)

Query: 344  VYTWGKGYCGALGHGDEIDKTLPEPLSS--LKSHLAVQVCARKRKTFVLVDTGSVYGFGW 401
            V+ WG      LG  D  +  +  P+ S  L     +Q     + +FV+ D G V+  G 
Sbjct: 2926 VFVWGLNDMRQLG-TDLSEAKVKSPIESRTLARLHPIQFAGGSKCSFVVSDDGKVFACGE 2984

Query: 402  MGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLY--HTVVVTDRGRLFGFGDNER 459
               G LG    G    +  P  + SL  + V +++      H + VT  G++F +GD + 
Sbjct: 2985 GSSGRLGI---GGFANIRMPHQISSLSMYVVRKVAVSCAGRHVLAVTADGKVFSWGDGQY 3041

Query: 460  AQLGHDTLRGCLEPTEIFI 478
             QLGH +L+    P  I I
Sbjct: 3042 GQLGHGSLQSYDRPKMIEI 3060


>gi|302876126|ref|YP_003844759.1| chromosome condensation regulator RCC1 [Clostridium cellulovorans
           743B]
 gi|302578983|gb|ADL52995.1| regulator of chromosome condensation RCC1 [Clostridium
           cellulovorans 743B]
          Length = 852

 Score =  115 bits (289), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 101/362 (27%), Positives = 165/362 (45%), Gaps = 21/362 (5%)

Query: 102 HSSDIVETSAGNMQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFP 160
           HS  +V  ++G + ++ G   T+ + N  +V+S G +  G LG G   T   S + +   
Sbjct: 26  HSQKVVAGTSGYIAVSAGNTTTIALKNDGTVWSWGFNQNGHLGDG---TTSNSNSPVQVK 82

Query: 161 SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQ 220
               +  +SA   H   +   G V+T G   S   G   TN     P  +  L G+    
Sbjct: 83  GLNGITAISAGWAHFVALKSDGTVWTWGVGYSGELGDG-TNSLRTTPAPINGLTGITA-- 139

Query: 221 VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 280
           ++AG N T  L   G + + G N +GQLG G+T +   P  +    ++G +  I++G  +
Sbjct: 140 ISAGWNHTLALKADGTLWSWGQNQYGQLGTGNTTNSNIPLQVP--GQIG-ITSISSGGGH 196

Query: 281 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 340
            L +  +G V+S+G  +   LG+G   +   P  I         ++ VSAG  H  AL S
Sbjct: 197 SLVIKNDGTVWSWGCNNFGQLGNGTNSNNPTPHQISGLN----GIINVSAGVIHSTALKS 252

Query: 341 SGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 400
            G V+ WG  + G L +G++ID  +P   + L   +A  + A    +  +   G+ + +G
Sbjct: 253 DGTVWNWGCNFRGELANGNKIDSYIPVQANGLNGIIA--ITAGWEFSSAIKSDGTFWVWG 310

Query: 401 WMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERA 460
              +G LG    G    V  P  + SL    ++ I TG  +TV +   G +F FG+N   
Sbjct: 311 VNDYGQLG---NGSKSDVTSPMQVSSLSG--ITAIDTGATYTVALKTDGNIFAFGENTYG 365

Query: 461 QL 462
           QL
Sbjct: 366 QL 367



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 63/207 (30%), Positives = 104/207 (50%), Gaps = 15/207 (7%)

Query: 272 VQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH-VVRVSA 330
           + ++AG +  +A+  +G V+S+G   N  LG G   +   P      + KG++ +  +SA
Sbjct: 38  IAVSAGNTTTIALKNDGTVWSWGFNQNGHLGDGTTSNSNSP-----VQVKGLNGITAISA 92

Query: 331 GDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVL 390
           G  H VAL S G V+TWG GY G LG G    +T P P++ L    A  + A    T  L
Sbjct: 93  GWAHFVALKSDGTVWTWGVGYSGELGDGTNSLRTTPAPINGLTGITA--ISAGWNHTLAL 150

Query: 391 VDTGSVYGFGWMGFGSLGFPDRGVSDKVLR-PRILDSLRAHHVSQISTGLYHTVVVTDRG 449
              G+++ +G   +G LG  +   S+  L+ P  +       ++ IS+G  H++V+ + G
Sbjct: 151 KADGTLWSWGQNQYGQLGTGNTTNSNIPLQVPGQI------GITSISSGGGHSLVIKNDG 204

Query: 450 RLFGFGDNERAQLGHDTLRGCLEPTEI 476
            ++ +G N   QLG+ T      P +I
Sbjct: 205 TVWSWGCNNFGQLGNGTNSNNPTPHQI 231



 Score = 69.3 bits (168), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 69/275 (25%), Positives = 124/275 (45%), Gaps = 20/275 (7%)

Query: 112 GNMQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSA 170
           G   I+ G  HTL L ++ +++S G +  G LG G  T   +    +  P    +  +S+
Sbjct: 136 GITAISAGWNHTLALKADGTLWSWGQNQYGQLGTGNTTNSNI---PLQVPGQIGITSISS 192

Query: 171 SENHAAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
              H+  +   G V++ G N+    G+  ++N P   P  +  L G+    V+AG+  + 
Sbjct: 193 GGGHSLVIKNDGTVWSWGCNNFGQLGNGTNSNNP--TPHQISGLNGI--INVSAGVIHST 248

Query: 230 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG--SVVQIAAGPSYMLAVTGN 287
            L   G V   G N  G+L +G+ +D     S  P++  G   ++ I AG  +  A+  +
Sbjct: 249 ALKSDGTVWNWGCNFRGELANGNKID-----SYIPVQANGLNGIIAITAGWEFSSAIKSD 303

Query: 288 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 347
           G  + +G      LG+G + D   P  + +       +  +  G  + VAL + G ++ +
Sbjct: 304 GTFWVWGVNDYGQLGNGSKSDVTSPMQVSSLS----GITAIDTGATYTVALKTDGNIFAF 359

Query: 348 GKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCA 382
           G+   G LG+G     T PE +S   +++A    A
Sbjct: 360 GENTYGQLGNGTTTGSTTPELVSIGDTYVATDKSA 394


>gi|297831070|ref|XP_002883417.1| regulator of chromosome condensation family protein [Arabidopsis
           lyrata subsp. lyrata]
 gi|297329257|gb|EFH59676.1| regulator of chromosome condensation family protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 1043

 Score =  115 bits (289), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 97/323 (30%), Positives = 144/323 (44%), Gaps = 20/323 (6%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V Q+     H A V + G+VFT G+      GH      I RP+LVE L       V  G
Sbjct: 253 VHQIVCGVRHVALVTRQGEVFTWGEEVGGRLGH-GIQVDISRPKLVEFLALTNIDFVACG 311

Query: 225 LNFTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSYM 281
              T  ++  G + + G   H  G LGHG  +    PK ++ PLE +  V+ +A G  + 
Sbjct: 312 EYHTCVVSTSGDLFSWGDGIHNVGLLGHGSDISHWIPKRVSGPLEGL-QVLSVACGTWHS 370

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL--- 338
              T NG +++FG G+   LGHG +     P+ +Q+    G+  V+V+    H  A+   
Sbjct: 371 ALATANGKLFTFGDGAFGVLGHGNRESVSYPKEVQSL--NGLKTVKVACSIWHTAAIVEV 428

Query: 339 -------DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 391
                   SS  ++TWG G    LGHG++    LP  +SSL  +   ++      T  L 
Sbjct: 429 MGQTGTSMSSRKLFTWGDGDKNRLGHGNKETYLLPTCVSSLIDYNFHKIACGHTFTVALT 488

Query: 392 DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRL 451
            +G V+  G    G LG     +SD  L   + D L    V +I+ G +H  V+T R  +
Sbjct: 489 TSGHVFTMGGTAHGQLG---NSISDGKLPCLVQDRLVGEFVEEIACGDHHVAVLTSRSEV 545

Query: 452 FGFGDNERAQLGHDTLRGCLEPT 474
           F +G     +LGH        PT
Sbjct: 546 FTWGKGANGRLGHGDTEDKRTPT 568



 Score = 94.7 bits (234), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 80/272 (29%), Positives = 134/272 (49%), Gaps = 19/272 (6%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSL--CGVLGHGPETTQCVSFTRINFP-SAAHVVQVSAS 171
           +  G YHT ++S S  +FS G  +   G+LGHG + +  +   R++ P     V+ V+  
Sbjct: 308 VACGEYHTCVVSTSGDLFSWGDGIHNVGLLGHGSDISHWIP-KRVSGPLEGLQVLSVACG 366

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG-F 230
             H+A    +G++FT GD +    GH +    +  P+ V++L G+   +V   +  T   
Sbjct: 367 TWHSALATANGKLFTFGDGAFGVLGHGN-RESVSYPKEVQSLNGLKTVKVACSIWHTAAI 425

Query: 231 LTIRGH---------VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 281
           + + G          + T G     +LGHG+      P  ++ L +  +  +IA G ++ 
Sbjct: 426 VEVMGQTGTSMSSRKLFTWGDGDKNRLGHGNKETYLLPTCVSSLIDY-NFHKIACGHTFT 484

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 341
           +A+T +G V++ G  ++  LG+     +L P  +Q  R  G  V  ++ GD HV  L S 
Sbjct: 485 VALTTSGHVFTMGGTAHGQLGNSISDGKL-PCLVQD-RLVGEFVEEIACGDHHVAVLTSR 542

Query: 342 GYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
             V+TWGKG  G LGHGD  DK  P  + +L+
Sbjct: 543 SEVFTWGKGANGRLGHGDTEDKRTPTCVEALR 574



 Score = 85.5 bits (210), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 79/300 (26%), Positives = 131/300 (43%), Gaps = 13/300 (4%)

Query: 182 GQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCG 241
           G+V+T G               +  PR +E+   +   Q+  G+     +T +G V T G
Sbjct: 217 GEVWTEGILPDGTVSKETVKTDVLTPRPLESNVVLDVHQIVCGVRHVALVTRQGEVFTWG 276

Query: 242 SNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC- 300
               G+LGHG  +D   PK +  L  + ++  +A G  +   V+ +G ++S+G G +   
Sbjct: 277 EEVGGRLGHGIQVDISRPKLVEFLA-LTNIDFVACGEYHTCVVSTSGDLFSWGDGIHNVG 335

Query: 301 -LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGD 359
            LGHG       P+ + +   +G+ V+ V+ G  H     ++G ++T+G G  G LGHG+
Sbjct: 336 LLGHGSDISHWIPKRV-SGPLEGLQVLSVACGTWHSALATANGKLFTFGDGAFGVLGHGN 394

Query: 360 EIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYG--------FGWMGFGSLGFPD 411
               + P+ + SL     V+V      T  +V+     G        F W G G      
Sbjct: 395 RESVSYPKEVQSLNGLKTVKVACSIWHTAAIVEVMGQTGTSMSSRKLFTW-GDGDKNRLG 453

Query: 412 RGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCL 471
            G  +  L P  + SL  ++  +I+ G   TV +T  G +F  G     QLG+    G L
Sbjct: 454 HGNKETYLLPTCVSSLIDYNFHKIACGHTFTVALTTSGHVFTMGGTAHGQLGNSISDGKL 513



 Score = 79.3 bits (194), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 89/344 (25%), Positives = 140/344 (40%), Gaps = 34/344 (9%)

Query: 115 QITTGRYHTLLISNS-SVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHVV 166
           QI  G  H  L++    VF+ G  + G LGHG       P+  + ++ T I+F       
Sbjct: 255 QIVCGVRHVALVTRQGEVFTWGEEVGGRLGHGIQVDISRPKLVEFLALTNIDF------- 307

Query: 167 QVSASENHAAFVLQSGQVFTCGD--NSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
            V+  E H   V  SG +F+ GD  ++    GH          R+   L+G+    V  G
Sbjct: 308 -VACGEYHTCVVSTSGDLFSWGDGIHNVGLLGHGSDISHWIPKRVSGPLEGLQVLSVACG 366

Query: 225 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE-----EVGSVVQIAAGPS 279
              +   T  G + T G    G LGHG+      PK +  L      +V   +   A   
Sbjct: 367 TWHSALATANGKLFTFGDGAFGVLGHGNRESVSYPKEVQSLNGLKTVKVACSIWHTAAIV 426

Query: 280 YMLAVTGNGV----VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHV 335
            ++  TG  +    ++++G G    LGHG +   L P  + +      H  +++ G    
Sbjct: 427 EVMGQTGTSMSSRKLFTWGDGDKNRLGHGNKETYLLPTCVSSLIDYNFH--KIACGHTFT 484

Query: 336 VALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSS-LKSHLAVQVCARKRKTFVLVDTG 394
           VAL +SG+V+T G    G LG+    D  LP  +   L      ++        VL    
Sbjct: 485 VALTTSGHVFTMGGTAHGQLGNSIS-DGKLPCLVQDRLVGEFVEEIACGDHHVAVLTSRS 543

Query: 395 SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTG 438
            V+ +G    G LG    G ++    P  +++LR  HV  +S G
Sbjct: 544 EVFTWGKGANGRLG---HGDTEDKRTPTCVEALRDRHVKSLSCG 584



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 72/250 (28%), Positives = 115/250 (46%), Gaps = 24/250 (9%)

Query: 114 MQITTGRYHTLL-ISNSSVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSAS 171
           + +  G +H+ L  +N  +F+ G    GVLGHG    + VS+ + +   +    V+V+ S
Sbjct: 361 LSVACGTWHSALATANGKLFTFGDGAFGVLGHG--NRESVSYPKEVQSLNGLKTVKVACS 418

Query: 172 ENHAAFVLQ----------SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQV 221
             H A +++          S ++FT GD      GH +    +  P  V +L      ++
Sbjct: 419 IWHTAAIVEVMGQTGTSMSSRKLFTWGDGDKNRLGHGNKETYLL-PTCVSSLIDYNFHKI 477

Query: 222 TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ-IAAGPSY 280
             G  FT  LT  GHV T G   HGQLG+  + D   P  +     VG  V+ IA G  +
Sbjct: 478 ACGHTFTVALTTSGHVFTMGGTAHGQLGNSIS-DGKLP-CLVQDRLVGEFVEEIACGDHH 535

Query: 281 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 340
           +  +T    V+++G G+N  LGHG+  D+  P  ++  R +  HV  +S G        S
Sbjct: 536 VAVLTSRSEVFTWGKGANGRLGHGDTEDKRTPTCVEALRDR--HVKSLSCGSN----FTS 589

Query: 341 SGYVYTWGKG 350
           S  ++ W  G
Sbjct: 590 SICIHKWVSG 599


>gi|302807678|ref|XP_002985533.1| hypothetical protein SELMODRAFT_122484 [Selaginella moellendorffii]
 gi|300146739|gb|EFJ13407.1| hypothetical protein SELMODRAFT_122484 [Selaginella moellendorffii]
          Length = 228

 Score =  115 bits (289), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 75/225 (33%), Positives = 114/225 (50%), Gaps = 9/225 (4%)

Query: 241 GSNTHGQLGHGDT---LDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 297
           G    GQLG  D     + P P+ +    E+   V++A G S+ LA+TG+G VYSFG G+
Sbjct: 5   GCGEFGQLGLKDAAGVFNSPLPRFLRGSREL-LFVRVACGSSHTLALTGSGDVYSFGQGT 63

Query: 298 NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 357
              LGHG       P  + +    G+ +V+++ GD H  AL   G +++WG+G  G LG 
Sbjct: 64  FGALGHGTTESCSSPVIVDSLW--GLGIVQIACGDNHSCALTVEGQLFSWGRGKYGQLGC 121

Query: 358 GDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDK 417
           G   +   P P+++L   L  QV      T  +   G +  F W G G  G    G  D 
Sbjct: 122 GSVENHLQPVPVTALSDRLLTQVVCGADYTMAIDSDGQL--FSW-GHGHWGQTGHGTQDN 178

Query: 418 VLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQL 462
           +L P+++ SL   ++ Q S G  H V +T  G ++ +GDNE+ Q+
Sbjct: 179 ILVPKLVCSLENDNIVQASAGARHAVALTSGGGVYAWGDNEQGQV 223



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 56/184 (30%), Positives = 91/184 (49%), Gaps = 4/184 (2%)

Query: 166 VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 225
           V+V+   +H   +  SG V++ G  +    GH  T      P +V++L G+   Q+  G 
Sbjct: 38  VRVACGSSHTLALTGSGDVYSFGQGTFGALGH-GTTESCSSPVIVDSLWGLGIVQIACGD 96

Query: 226 NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 285
           N +  LT+ G + + G   +GQLG G   +   P  +  L +   + Q+  G  Y +A+ 
Sbjct: 97  NHSCALTVEGQLFSWGRGKYGQLGCGSVENHLQPVPVTALSDR-LLTQVVCGADYTMAID 155

Query: 286 GNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVY 345
            +G ++S+G G     GHG Q + L P+ + +      ++V+ SAG  H VAL S G VY
Sbjct: 156 SDGQLFSWGHGHWGQTGHGTQDNILVPKLVCSLEND--NIVQASAGARHAVALTSGGGVY 213

Query: 346 TWGK 349
            WG 
Sbjct: 214 AWGD 217



 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 55/184 (29%), Positives = 89/184 (48%), Gaps = 8/184 (4%)

Query: 114 MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +++  G  HTL ++ S  V+S G    G LGHG  T  C S   ++      +VQ++  +
Sbjct: 38  VRVACGSSHTLALTGSGDVYSFGQGTFGALGHG-TTESCSSPVIVDSLWGLGIVQIACGD 96

Query: 173 NHAAFVLQSGQVFTCGDNS--SFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
           NH+  +   GQ+F+ G        CG  + +    +P  V AL      QV  G ++T  
Sbjct: 97  NHSCALTVEGQLFSWGRGKYGQLGCGSVENH---LQPVPVTALSDRLLTQVVCGADYTMA 153

Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 290
           +   G + + G    GQ GHG   +   PK +  LE   ++VQ +AG  + +A+T  G V
Sbjct: 154 IDSDGQLFSWGHGHWGQTGHGTQDNILVPKLVCSLEN-DNIVQASAGARHAVALTSGGGV 212

Query: 291 YSFG 294
           Y++G
Sbjct: 213 YAWG 216



 Score = 70.1 bits (170), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 52/174 (29%), Positives = 82/174 (47%), Gaps = 7/174 (4%)

Query: 312 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSS 371
           PR ++  R   +  VRV+ G  H +AL  SG VY++G+G  GALGHG     + P  + S
Sbjct: 26  PRFLRGSRE--LLFVRVACGSSHTLALTGSGDVYSFGQGTFGALGHGTTESCSSPVIVDS 83

Query: 372 LKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHH 431
           L     VQ+      +  L   G ++ +G   +G LG    G  +  L+P  + +L    
Sbjct: 84  LWGLGIVQIACGDNHSCALTVEGQLFSWGRGKYGQLGC---GSVENHLQPVPVTALSDRL 140

Query: 432 VSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQEMEEDT 485
           ++Q+  G  +T+ +   G+LF +G     Q GH T    L P    +  +E D 
Sbjct: 141 LTQVVCGADYTMAIDSDGQLFSWGHGHWGQTGHGTQDNILVPK--LVCSLENDN 192



 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 44/136 (32%), Positives = 65/136 (47%), Gaps = 6/136 (4%)

Query: 344 VYTWGKGYCGALGHGDE---IDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 400
           + +WG G  G LG  D     +  LP  L   +  L V+V      T  L  +G VY FG
Sbjct: 1   LVSWGCGEFGQLGLKDAAGVFNSPLPRFLRGSRELLFVRVACGSSHTLALTGSGDVYSFG 60

Query: 401 WMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERA 460
              FG+LG    G ++    P I+DSL    + QI+ G  H+  +T  G+LF +G  +  
Sbjct: 61  QGTFGALG---HGTTESCSSPVIVDSLWGLGIVQIACGDNHSCALTVEGQLFSWGRGKYG 117

Query: 461 QLGHDTLRGCLEPTEI 476
           QLG  ++   L+P  +
Sbjct: 118 QLGCGSVENHLQPVPV 133


>gi|301109553|ref|XP_002903857.1| regulator of chromosome condensation (RCC1)-like protein
            [Phytophthora infestans T30-4]
 gi|262096860|gb|EEY54912.1| regulator of chromosome condensation (RCC1)-like protein
            [Phytophthora infestans T30-4]
          Length = 1598

 Score =  115 bits (288), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 91/280 (32%), Positives = 130/280 (46%), Gaps = 31/280 (11%)

Query: 220  QVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLD--RPTP----KSIAPLE--EVGSV 271
            Q+  G   T  +T   H++T G    G+LGHG   D   P P     S+   E  E G V
Sbjct: 1248 QIACGYRHTALITDDRHLYTFGHGECGRLGHGTEEDCTDPIPVGYFTSLIAAEGVEFGGV 1307

Query: 272  VQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG 331
            V ++ G  + + VTGNG +Y FG G    LG GE    L P  +        ++  V+ G
Sbjct: 1308 VDVSCGREHTMVVTGNGDLYGFGWGEAGRLGTGETGSSLYPSRVDLR-----NIAAVACG 1362

Query: 332  DEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 391
             EH +AL S G V+ +G G+ G LG+G E D+ LP  +  L+ +  V + A +  +  L 
Sbjct: 1363 REHTLALTSKGRVFAFGAGFGGRLGNGSETDEELPFLVEGLEEYSIVAIAAGECHSCALS 1422

Query: 392  DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHH-----------VSQISTGLY 440
              G V  +   GFGS G    G  D  L P ++D    +            V+ ++ G Y
Sbjct: 1423 RDGEVLTW---GFGSSGALGHGTRDNCLIPTLVDGPWTNPNVETLIHDISVVTSVACGSY 1479

Query: 441  HTVVVTDRGRLFGFGDNERAQLGHDTLRG----CLEPTEI 476
            HT+  T+ G L+G+GD    QLG + L       L P EI
Sbjct: 1480 HTLAATNDGVLYGWGDAAAGQLGAEHLSAQDLVVLSPKEI 1519



 Score = 89.4 bits (220), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 90/331 (27%), Positives = 147/331 (44%), Gaps = 30/331 (9%)

Query: 148  TTQCVSFTR-INFPSA-AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGH---RDTNR 202
            +T+ +S  R ++FP     VVQ++    H A +     ++T G       GH    D   
Sbjct: 1227 STENLSAVRMVSFPPPLRRVVQIACGYRHTALITDDRHLYTFGHGECGRLGHGTEEDCTD 1286

Query: 203  PI---FRPRLVEALKGVP---CKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDR 256
            PI   +   L+ A +GV       V+ G   T  +T  G ++  G    G+LG G+T   
Sbjct: 1287 PIPVGYFTSLIAA-EGVEFGGVVDVSCGREHTMVVTGNGDLYGFGWGEAGRLGTGETGSS 1345

Query: 257  PTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQ 316
              P  +    ++ ++  +A G  + LA+T  G V++FG+G    LG+G + DE  P  ++
Sbjct: 1346 LYPSRV----DLRNIAAVACGREHTLALTSKGRVFAFGAGFGGRLGNGSETDEELPFLVE 1401

Query: 317  TFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHL 376
                  I  V ++AG+ H  AL   G V TWG G  GALGHG   +  +P  +    ++ 
Sbjct: 1402 GLEEYSI--VAIAAGECHSCALSRDGEVLTWGFGSSGALGHGTRDNCLIPTLVDGPWTNP 1459

Query: 377  AVQ-----------VCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSD-KVLRPRIL 424
             V+           V      T    + G +YG+G    G LG       D  VL P+ +
Sbjct: 1460 NVETLIHDISVVTSVACGSYHTLAATNDGVLYGWGDAAAGQLGAEHLSAQDLVVLSPKEI 1519

Query: 425  DSLRAHHVSQISTGLYHTVVVTDRGRLFGFG 455
                +  +  I+ G + + V + +G+LF +G
Sbjct: 1520 RLPTSSGIRGIACGTFTSAVCSTQGQLFMWG 1550



 Score = 81.6 bits (200), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 100/361 (27%), Positives = 153/361 (42%), Gaps = 39/361 (10%)

Query: 114  MQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPET-----------TQCVSFTRINFPS 161
            +QI  G  HT LI++   +++ G   CG LGHG E            T  ++   + F  
Sbjct: 1247 VQIACGYRHTALITDDRHLYTFGHGECGRLGHGTEEDCTDPIPVGYFTSLIAAEGVEF-- 1304

Query: 162  AAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRL-VEALKGVPCKQ 220
               VV VS    H   V  +G ++  G   +   G  +T   ++  R+ +  +  V C  
Sbjct: 1305 -GGVVDVSCGREHTMVVTGNGDLYGFGWGEAGRLGTGETGSSLYPSRVDLRNIAAVAC-- 1361

Query: 221  VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 280
               G   T  LT +G V   G+   G+LG+G   D   P  +  LEE  S+V IAAG  +
Sbjct: 1362 ---GREHTLALTSKGRVFAFGAGFGGRLGNGSETDEELPFLVEGLEEY-SIVAIAAGECH 1417

Query: 281  MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRA---------IQTFRRKGIHVVRVSAG 331
              A++ +G V ++G GS+  LGHG + + L P           ++T       V  V+ G
Sbjct: 1418 SCALSRDGEVLTWGFGSSGALGHGTRDNCLIPTLVDGPWTNPNVETLIHDISVVTSVACG 1477

Query: 332  DEHVVALDSSGYVYTWGKGYCGALG--HGDEIDKTLPEPLS-SLKSHLAVQVCARKRKTF 388
              H +A  + G +Y WG    G LG  H    D  +  P    L +   ++  A    T 
Sbjct: 1478 SYHTLAATNDGVLYGWGDAAAGQLGAEHLSAQDLVVLSPKEIRLPTSSGIRGIACGTFTS 1537

Query: 389  VLVDT-GSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTD 447
             +  T G ++ +G    G+ G P       V R  +L        SQI+ G YH V +T 
Sbjct: 1538 AVCSTQGQLFMWGSPAAGN-GAPLDVEDAHVKRVGVLGEF---EFSQIACGAYHAVAITR 1593

Query: 448  R 448
            +
Sbjct: 1594 K 1594



 Score = 76.3 bits (186), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 52/150 (34%), Positives = 77/150 (51%), Gaps = 15/150 (10%)

Query: 324  HVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLA------ 377
             VV+++ G  H   +    ++YT+G G CG LGHG E D T P P+    S +A      
Sbjct: 1245 RVVQIACGYRHTALITDDRHLYTFGHGECGRLGHGTEEDCTDPIPVGYFTSLIAAEGVEF 1304

Query: 378  ---VQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQ 434
               V V   +  T V+   G +YGFGW   G LG  + G S   L P  +D LR  +++ 
Sbjct: 1305 GGVVDVSCGREHTMVVTGNGDLYGFGWGEAGRLGTGETGSS---LYPSRVD-LR--NIAA 1358

Query: 435  ISTGLYHTVVVTDRGRLFGFGDNERAQLGH 464
            ++ G  HT+ +T +GR+F FG     +LG+
Sbjct: 1359 VACGREHTLALTSKGRVFAFGAGFGGRLGN 1388



 Score = 75.1 bits (183), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 66/212 (31%), Positives = 100/212 (47%), Gaps = 15/212 (7%)

Query: 271  VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRR----KGIH-- 324
            VVQIA G  +   +T +  +Y+FG G    LGHG + D   P  +  F      +G+   
Sbjct: 1246 VVQIACGYRHTALITDDRHLYTFGHGECGRLGHGTEEDCTDPIPVGYFTSLIAAEGVEFG 1305

Query: 325  -VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCAR 383
             VV VS G EH + +  +G +Y +G G  G LG G+      P  +     ++A   C R
Sbjct: 1306 GVVDVSCGREHTMVVTGNGDLYGFGWGEAGRLGTGETGSSLYPSRVD--LRNIAAVACGR 1363

Query: 384  KRKTFVLVDTGSVYGFGWMGF-GSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHT 442
            +  T  L   G V+ FG  GF G LG  +   +D+ L P +++ L  + +  I+ G  H+
Sbjct: 1364 EH-TLALTSKGRVFAFG-AGFGGRLG--NGSETDEEL-PFLVEGLEEYSIVAIAAGECHS 1418

Query: 443  VVVTDRGRLFGFGDNERAQLGHDTLRGCLEPT 474
              ++  G +  +G      LGH T   CL PT
Sbjct: 1419 CALSRDGEVLTWGFGSSGALGHGTRDNCLIPT 1450



 Score = 58.9 bits (141), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 70/267 (26%), Positives = 115/267 (43%), Gaps = 27/267 (10%)

Query: 112  GNMQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSA 170
            G + ++ GR HT++++ N  ++  G    G LG G ET   +  +R++     ++  V+ 
Sbjct: 1306 GVVDVSCGREHTMVVTGNGDLYGFGWGEAGRLGTG-ETGSSLYPSRVDL---RNIAAVAC 1361

Query: 171  SENHAAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
               H   +   G+VF  G       G+  +T+  +  P LVE L+      + AG   + 
Sbjct: 1362 GREHTLALTSKGRVFAFGAGFGGRLGNGSETDEEL--PFLVEGLEEYSIVAIAAGECHSC 1419

Query: 230  FLTIRGHVHTCGSNTHGQLGHG--DTLDRPT--------PKSIAPLEEVGSVVQIAAGPS 279
             L+  G V T G  + G LGHG  D    PT        P     + ++  V  +A G  
Sbjct: 1420 ALSRDGEVLTWGFGSSGALGHGTRDNCLIPTLVDGPWTNPNVETLIHDISVVTSVACGSY 1479

Query: 280  YMLAVTGNGVVYSFGSGSNFCLG--HGEQHD--ELQPRAIQTFRRKGIHVVRVSAGDEHV 335
            + LA T +GV+Y +G  +   LG  H    D   L P+ I+     GI    ++ G    
Sbjct: 1480 HTLAATNDGVLYGWGDAAAGQLGAEHLSAQDLVVLSPKEIRLPTSSGIR--GIACGTFTS 1537

Query: 336  VALDSSGYVYTWGKGYCGALGHGDEID 362
                + G ++ WG     A G+G  +D
Sbjct: 1538 AVCSTQGQLFMWGS---PAAGNGAPLD 1561



 Score = 38.5 bits (88), Expect = 7.2,   Method: Compositional matrix adjust.
 Identities = 18/47 (38%), Positives = 25/47 (53%)

Query: 430  HHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 476
              V QI+ G  HT ++TD   L+ FG  E  +LGH T   C +P  +
Sbjct: 1244 RRVVQIACGYRHTALITDDRHLYTFGHGECGRLGHGTEEDCTDPIPV 1290


>gi|281207647|gb|EFA81827.1| putative protein serine/threonine kinase [Polysphondylium pallidum
           PN500]
          Length = 1626

 Score =  115 bits (288), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 97/313 (30%), Positives = 152/313 (48%), Gaps = 23/313 (7%)

Query: 154 FTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEAL 213
           FT++ +P    ++ V+A   H A + QSG++FT G+      GH D    I  P+ V AL
Sbjct: 122 FTKL-YPEE-RIILVNAGAAHIAMISQSGKLFTWGEGQYGRLGHGD-EESISTPKQVVAL 178

Query: 214 KGVPCKQVTAGLNFTGFL--TIRGHVHTCGSNTHGQLGHGDTLDRPT--PKSIAPLEEVG 269
             +P K V  G   T  L  T    ++T G+N  GQLG GD  D  T  P+S+A +    
Sbjct: 179 ANIPMKYVFCGGRSTIALSHTAGSGLYTWGNNEFGQLGRGDCGDDFTCLPESVA-VPGAK 237

Query: 270 SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS 329
            +V + AG S    +  +G ++++G G +  LGHG+  +  QP  + +    G  VV V+
Sbjct: 238 RLVALDAGASRAAVIDSSGALFTWGRGDHGRLGHGDTENRYQPTLVSSLY--GHVVVAVA 295

Query: 330 AGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTL-PEPLS-SLKSHLAVQVCARKRKT 387
            G  H +AL  +G +++WG+G  G LGHG    + L P+ L   +     + + A    +
Sbjct: 296 LGGGHSLALTKAGELFSWGRGENGQLGHGSYQSQQLAPKQLQFFVDMPKIIGISAGGYHS 355

Query: 388 FVLVDTGSVYGFGWMGFGSLGFPDR-----GVSDKVLRPRILDSLRAHHVSQISTGLYHT 442
              +D GSVY +G   +G LG  D       +  ++L PR +          IS G  HT
Sbjct: 356 VAQLDDGSVYAWGMSDYGILGTGDSDDGAINIPQRILMPRGI------RFKTISCGFQHT 409

Query: 443 VVVTDRGRLFGFG 455
           V +T    ++ +G
Sbjct: 410 VALTSDNTIYSWG 422



 Score = 89.4 bits (220), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 73/242 (30%), Positives = 115/242 (47%), Gaps = 7/242 (2%)

Query: 129 SSVFSCGSSLCGVLGHGP--ETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFT 186
           S +++ G++  G LG G   +   C+    +  P A  +V + A  + AA +  SG +FT
Sbjct: 202 SGLYTWGNNEFGQLGRGDCGDDFTCLP-ESVAVPGAKRLVALDAGASRAAVIDSSGALFT 260

Query: 187 CGDNSSFCCGHRDT-NRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTH 245
            G       GH DT NR  ++P LV +L G     V  G   +  LT  G + + G   +
Sbjct: 261 WGRGDHGRLGHGDTENR--YQPTLVSSLYGHVVVAVALGGGHSLALTKAGELFSWGRGEN 318

Query: 246 GQLGHGDTLDRP-TPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHG 304
           GQLGHG    +   PK +    ++  ++ I+AG  + +A   +G VY++G      LG G
Sbjct: 319 GQLGHGSYQSQQLAPKQLQFFVDMPKIIGISAGGYHSVAQLDDGSVYAWGMSDYGILGTG 378

Query: 305 EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKT 364
           +  D       +    +GI    +S G +H VAL S   +Y+WG G  G LG  +E ++ 
Sbjct: 379 DSDDGAINIPQRILMPRGIRFKTISCGFQHTVALTSDNTIYSWGCGLGGRLGTFNEKNQC 438

Query: 365 LP 366
            P
Sbjct: 439 AP 440



 Score = 89.0 bits (219), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 73/254 (28%), Positives = 117/254 (46%), Gaps = 22/254 (8%)

Query: 221 VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 280
           V AG      ++  G + T G   +G+LGHGD     TPK +  L  +        G S 
Sbjct: 134 VNAGAAHIAMISQSGKLFTWGEGQYGRLGHGDEESISTPKQVVALANIPMKYVFCGGRST 193

Query: 281 M-LAVTGNGVVYSFGSGSNFCLGHGEQHDELQ--PRAIQTFRRKGIHVVRVSAGDEHVVA 337
           + L+ T    +Y++G+     LG G+  D+    P ++     K   +V + AG      
Sbjct: 194 IALSHTAGSGLYTWGNNEFGQLGRGDCGDDFTCLPESVAVPGAK--RLVALDAGASRAAV 251

Query: 338 LDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVY 397
           +DSSG ++TWG+G  G LGHGD  ++  P  +SSL  H+ V V      +  L   G ++
Sbjct: 252 IDSSGALFTWGRGDHGRLGHGDTENRYQPTLVSSLYGHVVVAVALGGGHSLALTKAGELF 311

Query: 398 GFGWMGFGSLG---FPDRGVSDKVLR-----PRILDSLRAHHVSQISTGLYHTVVVTDRG 449
            +G    G LG   +  + ++ K L+     P+I+          IS G YH+V   D G
Sbjct: 312 SWGRGENGQLGHGSYQSQQLAPKQLQFFVDMPKIIG---------ISAGGYHSVAQLDDG 362

Query: 450 RLFGFGDNERAQLG 463
            ++ +G ++   LG
Sbjct: 363 SVYAWGMSDYGILG 376



 Score = 84.7 bits (208), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 81/262 (30%), Positives = 115/262 (43%), Gaps = 16/262 (6%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETT-----QCVSFTRINFPSAAHVVQVS 169
           +  G  H  +IS S  +F+ G    G LGHG E +     Q V+   I         + +
Sbjct: 134 VNAGAAHIAMISQSGKLFTWGEGQYGRLGHGDEESISTPKQVVALANIPMKYVFCGGRST 193

Query: 170 ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIF-RPRLVEALKGVPCKQVTAGLNFT 228
            + +H A       ++T G+N     G  D        P  V          + AG +  
Sbjct: 194 IALSHTA----GSGLYTWGNNEFGQLGRGDCGDDFTCLPESVAVPGAKRLVALDAGASRA 249

Query: 229 GFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLAVTGN 287
             +   G + T G   HG+LGHGDT +R  P  ++ L   G VV  +A G  + LA+T  
Sbjct: 250 AVIDSSGALFTWGRGDHGRLGHGDTENRYQPTLVSSL--YGHVVVAVALGGGHSLALTKA 307

Query: 288 GVVYSFGSGSNFCLGHGE-QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYT 346
           G ++S+G G N  LGHG  Q  +L P+ +Q F      ++ +SAG  H VA    G VY 
Sbjct: 308 GELFSWGRGENGQLGHGSYQSQQLAPKQLQFFVDMP-KIIGISAGGYHSVAQLDDGSVYA 366

Query: 347 WGKGYCGALGHGDEIDKTLPEP 368
           WG    G LG GD  D  +  P
Sbjct: 367 WGMSDYGILGTGDSDDGAINIP 388



 Score = 74.7 bits (182), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 66/259 (25%), Positives = 121/259 (46%), Gaps = 12/259 (4%)

Query: 237 VHTCGSNT-HGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 295
           +   G+N+ H +   G   +    K    L     ++ + AG +++  ++ +G ++++G 
Sbjct: 96  LKNSGNNSLHNKDDSGSNNNNDDDKYFTKLYPEERIILVNAGAAHIAMISQSGKLFTWGE 155

Query: 296 GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG--YVYTWGKGYCG 353
           G    LGHG++     P+  Q      I +  V  G    +AL  +    +YTWG    G
Sbjct: 156 GQYGRLGHGDEESISTPK--QVVALANIPMKYVFCGGRSTIALSHTAGSGLYTWGNNEFG 213

Query: 354 ALGHGDEIDK--TLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 411
            LG GD  D    LPE ++   +   V + A   +  V+  +G+++ +G    G LG   
Sbjct: 214 QLGRGDCGDDFTCLPESVAVPGAKRLVALDAGASRAAVIDSSGALFTWGRGDHGRLG--- 270

Query: 412 RGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG-C 470
            G ++   +P ++ SL  H V  ++ G  H++ +T  G LF +G  E  QLGH + +   
Sbjct: 271 HGDTENRYQPTLVSSLYGHVVVAVALGGGHSLALTKAGELFSWGRGENGQLGHGSYQSQQ 330

Query: 471 LEPTEI-FIQEMEEDTGLA 488
           L P ++ F  +M +  G++
Sbjct: 331 LAPKQLQFFVDMPKIIGIS 349


>gi|145495055|ref|XP_001433521.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124400639|emb|CAK66124.1| unnamed protein product [Paramecium tetraurelia]
          Length = 447

 Score =  115 bits (287), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 98/336 (29%), Positives = 153/336 (45%), Gaps = 29/336 (8%)

Query: 145 GPETTQCVSFTR--------INFPSAAH---VVQVSASENHAAFVLQSGQVFTCGDNSSF 193
           G E+T C++  +        I  P       + Q++AS+ H  F     QVF CG N   
Sbjct: 44  GAESTFCITIHKKVFMWGQGIQIPKQLELQDIEQIAASKEHW-FAWSDTQVFGCGSNKQG 102

Query: 194 CCGHRDT-NRPIFRPRLVEALK-GVPCKQVTAGLNFTGFLTI---RGHVHTCGSNTHGQL 248
             G  ++ N P       EA + G   +++  GL+ +  L        +   GSN + QL
Sbjct: 103 KLGMNNSVNTPTLFDIFSEASQYGWQLQKIAVGLDHSVALIEVEEENKIFVWGSNAYQQL 162

Query: 249 GHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHD 308
           G   +            + +  +V I A  +Y +A+   G ++S+GS     LG      
Sbjct: 163 GFDASEQFVAIPHQLDSDNLPRIVDIYAQHNYTMAIDEEGRLFSWGSNEFGRLGQNAFAK 222

Query: 309 ELQ-PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPE 367
            ++ P  I +     + + +++ G  HV+A+D+ G +Y+WG+G  G LGHG   D + P 
Sbjct: 223 CMKLPSPITSL--GNLKIAKLALGTFHVLAIDTQGNLYSWGRGLQGQLGHGTSNDCSKPN 280

Query: 368 PLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSL 427
            +SSL S     V   +  +  L + GSVY FG   FG LG  D    D    P++L   
Sbjct: 281 QISSLSS--IRDVACGEAHSMALQNNGSVYVFGSGQFGQLGLGDYKQQDA---PQMLQI- 334

Query: 428 RAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 463
              H   I+ G +H+ V+T  G LF FG+NE +QLG
Sbjct: 335 ---HGEMIACGRHHSAVLTKNGALFMFGNNESSQLG 367



 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 75/295 (25%), Positives = 133/295 (45%), Gaps = 21/295 (7%)

Query: 115 QITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPS--AAHVVQVSASE 172
           QI   + H    S++ VF CGS+  G LG          F   +  S     + +++   
Sbjct: 77  QIAASKEHWFAWSDTQVFGCGSNKQGKLGMNNSVNTPTLFDIFSEASQYGWQLQKIAVGL 136

Query: 173 NHAAFVL---QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
           +H+  ++   +  ++F  G N+    G   + + +  P  +++        + A  N+T 
Sbjct: 137 DHSVALIEVEEENKIFVWGSNAYQQLGFDASEQFVAIPHQLDSDNLPRIVDIYAQHNYTM 196

Query: 230 FLTIRGHVHTCGSNTHGQLGH---GDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVT 285
            +   G + + GSN  G+LG       +  P+P  S+  L+    + ++A G  ++LA+ 
Sbjct: 197 AIDEEGRLFSWGSNEFGRLGQNAFAKCMKLPSPITSLGNLK----IAKLALGTFHVLAID 252

Query: 286 GNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVY 345
             G +YS+G G    LGHG  +D  +P  I +       +  V+ G+ H +AL ++G VY
Sbjct: 253 TQGNLYSWGRGLQGQLGHGTSNDCSKPNQISSLSS----IRDVACGEAHSMALQNNGSVY 308

Query: 346 TWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 400
            +G G  G LG GD   +  P+    L+ H  +  C R     VL   G+++ FG
Sbjct: 309 VFGSGQFGQLGLGDYKQQDAPQ---MLQIHGEMIACGRHHSA-VLTKNGALFMFG 359



 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 56/225 (24%), Positives = 96/225 (42%), Gaps = 16/225 (7%)

Query: 259 PKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTF 318
           PK +    E+  + QIAA   +  A +   V   FG GSN     G  +    P     F
Sbjct: 67  PKQL----ELQDIEQIAASKEHWFAWSDTQV---FGCGSNKQGKLGMNNSVNTPTLFDIF 119

Query: 319 R---RKGIHVVRVSAGDEHVVAL---DSSGYVYTWGKGYCGALG-HGDEIDKTLPEPLSS 371
               + G  + +++ G +H VAL   +    ++ WG      LG    E    +P  L S
Sbjct: 120 SEASQYGWQLQKIAVGLDHSVALIEVEEENKIFVWGSNAYQQLGFDASEQFVAIPHQLDS 179

Query: 372 LKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHH 431
                 V + A+   T  + + G ++ +G   FG LG      +  +  P  + SL    
Sbjct: 180 DNLPRIVDIYAQHNYTMAIDEEGRLFSWGSNEFGRLG--QNAFAKCMKLPSPITSLGNLK 237

Query: 432 VSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 476
           +++++ G +H + +  +G L+ +G   + QLGH T   C +P +I
Sbjct: 238 IAKLALGTFHVLAIDTQGNLYSWGRGLQGQLGHGTSNDCSKPNQI 282


>gi|348563524|ref|XP_003467557.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6-like [Cavia
           porcellus]
          Length = 1016

 Score =  115 bits (287), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 82/248 (33%), Positives = 122/248 (49%), Gaps = 5/248 (2%)

Query: 220 QVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPS 279
           Q  +G      L     VH CG N+ GQLG         P+ I  L  +  V  ++ G  
Sbjct: 33  QAASGERHALLLLTNQVVHACGDNSGGQLGRRGAPSGKQPEPIQALVNL-PVDLVSCGKE 91

Query: 280 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDE-LQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
           + LAV   G V+++G GS+  LG G+  +    P+ I+     GI ++++S G  H +AL
Sbjct: 92  HSLAVCHKGKVFAWGVGSDGQLGTGKFEEICFIPQKIKAL--TGIKIIQISCGYYHSLAL 149

Query: 339 DSSGYVYTWGKGYCGALGHGDEI-DKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVY 397
              G V++WGK   G LG G E   +  P+ + SL+     QV A    +F L  +G+ +
Sbjct: 150 SKDGQVFSWGKNSHGQLGLGQEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGTSF 209

Query: 398 GFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDN 457
           G+G    G L F    V  +  +PR + +L+   V  IS G  HT V+T   ++F FGDN
Sbjct: 210 GWGNNSAGQLAFSGNNVLVQSYKPRSVGALKNLGVVYISCGYEHTAVLTQNDQVFTFGDN 269

Query: 458 ERAQLGHD 465
              QLGH+
Sbjct: 270 SFGQLGHN 277



 Score = 95.9 bits (237), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 96/353 (27%), Positives = 153/353 (43%), Gaps = 26/353 (7%)

Query: 112 GNMQITTGRYHTLLI-SNSSVFSCGSSLCGVLGH-------GPETTQCVSFTRINFPSAA 163
           G +Q  +G  H LL+ +N  V +CG +  G LG         PE  Q +    +N P   
Sbjct: 30  GLLQAASGERHALLLLTNQVVHACGDNSGGQLGRRGAPSGKQPEPIQAL----VNLP--- 82

Query: 164 HVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTA 223
            V  VS  + H+  V   G+VF  G  S    G        F P+ ++AL G+   Q++ 
Sbjct: 83  -VDLVSCGKEHSLAVCHKGKVFAWGVGSDGQLGTGKFEEICFIPQKIKALTGIKIIQISC 141

Query: 224 GLNFTGFLTIRGHVHTCGSNTHGQLGHGDTL-DRPTPKSIAPLEEVGSVVQIAAGPSYML 282
           G   +  L+  G V + G N+HGQLG G     + +P+ +  LE +  + Q+AAG ++  
Sbjct: 142 GYYHSLALSKDGQVFSWGKNSHGQLGLGQEFPSQASPQRVRSLEGI-PLAQVAAGGAHSF 200

Query: 283 AVTGNGVVYSFGSGSNFCL---GHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 339
           A++ +G  + +G+ S   L   G+       +PR++   +  G  VV +S G EH   L 
Sbjct: 201 ALSLSGTSFGWGNNSAGQLAFSGNNVLVQSYKPRSVGALKNLG--VVYISCGYEHTAVLT 258

Query: 340 SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGF 399
            +  V+T+G    G LGH      T P+ +  +   ++   C        +  TG V  F
Sbjct: 259 QNDQVFTFGDNSFGQLGHNGVSQTTGPQLVEGIGGPVSQIDCGSYHTLAYVYTTGQVVSF 318

Query: 400 GWMG--FGSLGFPDRGVSDKVLRPRI-LDSLRAHHVSQISTGLYHTVVVTDRG 449
           G       +   P+    +  +   I  D LR   +  I  G Y   V T +G
Sbjct: 319 GREPSHTSNPTHPETPSENSDISCLISADDLRDIQIKHIFAGTYADFVTTHQG 371


>gi|413938284|gb|AFW72835.1| putative regulator of chromosome condensation (RCC1) family protein
           [Zea mays]
          Length = 801

 Score =  115 bits (287), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 89/330 (26%), Positives = 146/330 (44%), Gaps = 35/330 (10%)

Query: 152 VSFTRINFP------SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIF 205
           VS T I+ P          V  ++  E HAA V + G+VF+ G+ +    GH+ T+  + 
Sbjct: 7   VSGTNISLPRLLKSSQILDVQSIACGEKHAAIVTKQGKVFSWGEENGGRLGHK-TSDSVS 65

Query: 206 RPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPT--PKSIA 263
            P+++++L   P K +  G  +T  +++ G ++  G   H      +   R    P  + 
Sbjct: 66  DPKIIDSLASTPMKTIALGAKYTCAVSVSGELYEWGEGIHSLGFKNNQCQRSPWFPHKLI 125

Query: 264 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGI 323
              +  SV +IA G  +   V+  G ++++G G+   LGHG+    +QP+ +++ R  G+
Sbjct: 126 RTSDGISVAKIACGQWHTAIVSSTGKLFTYGHGTFGVLGHGDTRSVVQPKEVESLR--GL 183

Query: 324 HVVRVSAGDEHVVALDSS----------GYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
            V  V+ G  H  A+  +          G ++TWG      LGH D+  K +P  + SL 
Sbjct: 184 RVKSVACGPWHTAAIVETSGTPKSNAPGGKLFTWGNASGEKLGHTDKKSKLVPTRVESLI 243

Query: 374 SHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVS 433
                  C      F  V  G V+  G    G LG P    SD      +   L+   V 
Sbjct: 244 D------C-----DFTQVSCGVVFTIGSKDHGQLGNPR---SDSACICMVEGPLKTEFVK 289

Query: 434 QISTGLYHTVVVTDRGRLFGFGDNERAQLG 463
            IS+G  H  V+T  G++F +G     QLG
Sbjct: 290 DISSGNSHVAVLTMNGKVFTWGKGTEGQLG 319



 Score = 78.6 bits (192), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 77/311 (24%), Positives = 129/311 (41%), Gaps = 56/311 (18%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRI-NFPSAAHVVQVSASEN 173
           I  G  H  +++    VFS G    G LGH  +T+  VS  +I +  ++  +  ++    
Sbjct: 29  IACGEKHAAIVTKQGKVFSWGEENGGRLGH--KTSDSVSDPKIIDSLASTPMKTIALGAK 86

Query: 174 HAAFVLQSGQVFTCGDN-SSFCCGHRDTNR-PIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
           +   V  SG+++  G+   S    +    R P F  +L+    G+   ++  G   T  +
Sbjct: 87  YTCAVSVSGELYEWGEGIHSLGFKNNQCQRSPWFPHKLIRTSDGISVAKIACGQWHTAIV 146

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN---- 287
           +  G + T G  T G LGHGDT     PK +  L  +  V  +A GP +  A+       
Sbjct: 147 SSTGKLFTYGHGTFGVLGHGDTRSVVQPKEVESLRGL-RVKSVACGPWHTAAIVETSGTP 205

Query: 288 ------GVVYSFGSGSNFCLGHGEQHDELQPRAIQTF----------------------- 318
                 G ++++G+ S   LGH ++  +L P  +++                        
Sbjct: 206 KSNAPGGKLFTWGNASGEKLGHTDKKSKLVPTRVESLIDCDFTQVSCGVVFTIGSKDHGQ 265

Query: 319 ----------------RRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEID 362
                             K   V  +S+G+ HV  L  +G V+TWGKG  G LG GD +D
Sbjct: 266 LGNPRSDSACICMVEGPLKTEFVKDISSGNSHVAVLTMNGKVFTWGKGTEGQLGLGDYLD 325

Query: 363 KTLPEPLSSLK 373
           +T P  + +L+
Sbjct: 326 RTFPTLVEALE 336



 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 54/223 (24%), Positives = 101/223 (45%), Gaps = 18/223 (8%)

Query: 267 EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVV 326
           ++  V  IA G  +   VT  G V+S+G  +   LGH        P+ I +     +  +
Sbjct: 22  QILDVQSIACGEKHAAIVTKQGKVFSWGEENGGRLGHKTSDSVSDPKIIDSLASTPMKTI 81

Query: 327 RVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKT--LPEPLSSLKSHLAV-QVCAR 383
            +  G ++  A+  SG +Y WG+G        ++  ++   P  L      ++V ++   
Sbjct: 82  AL--GAKYTCAVSVSGELYEWGEGIHSLGFKNNQCQRSPWFPHKLIRTSDGISVAKIACG 139

Query: 384 KRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV 443
           +  T ++  TG ++ +G   FG LG  D   +  V++P+ ++SLR   V  ++ G +HT 
Sbjct: 140 QWHTAIVSSTGKLFTYGHGTFGVLGHGD---TRSVVQPKEVESLRGLRVKSVACGPWHTA 196

Query: 444 VVTDR----------GRLFGFGDNERAQLGHDTLRGCLEPTEI 476
            + +           G+LF +G+    +LGH   +  L PT +
Sbjct: 197 AIVETSGTPKSNAPGGKLFTWGNASGEKLGHTDKKSKLVPTRV 239



 Score = 40.4 bits (93), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 27/101 (26%), Positives = 47/101 (46%), Gaps = 3/101 (2%)

Query: 356 GHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVS 415
           GH    + +LP  L S +      +   ++   ++   G V+ +G    G LG      S
Sbjct: 5   GHVSGTNISLPRLLKSSQILDVQSIACGEKHAAIVTKQGKVFSWGEENGGRLGHK---TS 61

Query: 416 DKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGD 456
           D V  P+I+DSL +  +  I+ G  +T  V+  G L+ +G+
Sbjct: 62  DSVSDPKIIDSLASTPMKTIALGAKYTCAVSVSGELYEWGE 102



 Score = 40.0 bits (92), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 19/56 (33%), Positives = 30/56 (53%)

Query: 421 PRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 476
           PR+L S +   V  I+ G  H  +VT +G++F +G+    +LGH T     +P  I
Sbjct: 15  PRLLKSSQILDVQSIACGEKHAAIVTKQGKVFSWGEENGGRLGHKTSDSVSDPKII 70


>gi|442319170|ref|YP_007359191.1| RCC1 repeat-containing protein [Myxococcus stipitatus DSM 14675]
 gi|441486812|gb|AGC43507.1| RCC1 repeat-containing protein [Myxococcus stipitatus DSM 14675]
          Length = 1095

 Score =  114 bits (286), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 102/358 (28%), Positives = 165/358 (46%), Gaps = 24/358 (6%)

Query: 122 HTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSA-SENHAAFVL 179
           H+L++ S+ +V++ GS+  G LG G +  + V    +     + VV V+A S  H+  V+
Sbjct: 309 HSLVLKSDGTVWTWGSNQRGQLGDGTQEQRLVPVQVMGL---SGVVAVAAGSGQHSVAVM 365

Query: 180 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI-RGHVH 238
            +G+V+T G N     G   ++     P+   AL  V    V AG  + G  +   G V 
Sbjct: 366 ANGEVWTWGHNVEGQLGEGSSSYSAV-PKRSHAL--VERTSVAAG-RYHGLASKPDGTVW 421

Query: 239 TCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
             G N  GQLG G T  R  P  +  L  +   V +AAG    LA+  +G V+++G  +N
Sbjct: 422 AWGDNAKGQLGDGTTAQRLLPTQVPGLTNM---VAVAAGHHSSLALKADGTVWAWGDNAN 478

Query: 299 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 358
             LG+G   D   P  +         VV ++AG  H +A+ + G ++TWG    G LG G
Sbjct: 479 GQLGNGSTTDRSNPTQVPGL----TGVVSIAAGPGHALAVKADGTLWTWGDNNTGQLGDG 534

Query: 359 DEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKV 418
             +D+ +P  +  +     V V A    + V+   G+V+ +G    G LG          
Sbjct: 535 TTVDRPIPTQVPGVTG--VVSVAAGLYHSLVVKVDGTVWAWGSNYEGQLGG-----GTTT 587

Query: 419 LRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 476
           +RP    +     V  I+ GLYH++ +   G ++ +G N   QLG+        PT++
Sbjct: 588 IRPVPSQTPNLTGVVAITAGLYHSLALKTDGTVWAWGYNLHGQLGNGNTTTQQVPTQV 645



 Score =  105 bits (262), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 96/367 (26%), Positives = 168/367 (45%), Gaps = 26/367 (7%)

Query: 114 MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +++  G  H+L L ++ +V++ GS+  G LG G  T + +       P+   +  ++A  
Sbjct: 151 VRVAAGFSHSLALKTDGTVWAWGSNGAGRLGDGTTTQRLMPVQVQGLPT---IKAIAAGN 207

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            H+  +  +G+V+  G NS+   G       +  P LV  L       ++AG N +    
Sbjct: 208 AHSLALDGTGRVWAWGSNSNGQLGDTTAGYRML-PALVPGL--TNATGLSAGSNHSLVRQ 264

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
             G     G+NT+GQLG G T  R  P+ ++ L  V  V+       + L +  +G V++
Sbjct: 265 ADGTTWVWGANTYGQLGDGTTTSRSAPQQVSGLAGVDGVL---GAELHSLVLKSDGTVWT 321

Query: 293 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 352
           +GS     LG G Q   L P  +Q     G+  V   +G +H VA+ ++G V+TWG    
Sbjct: 322 WGSNQRGQLGDGTQEQRLVP--VQVMGLSGVVAVAAGSG-QHSVAVMANGEVWTWGHNVE 378

Query: 353 GALGHGDEIDKTLPEPLSSLKSHLAVQ---VCARKRKTFVLVDTGSVYGFGWMGFGSLGF 409
           G LG G      +P+     +SH  V+   V A +         G+V+ +G    G LG 
Sbjct: 379 GQLGEGSSSYSAVPK-----RSHALVERTSVAAGRYHGLASKPDGTVWAWGDNAKGQLG- 432

Query: 410 PDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG 469
              G + + L P  +  L   ++  ++ G + ++ +   G ++ +GDN   QLG+ +   
Sbjct: 433 --DGTTAQRLLPTQVPGLT--NMVAVAAGHHSSLALKADGTVWAWGDNANGQLGNGSTTD 488

Query: 470 CLEPTEI 476
              PT++
Sbjct: 489 RSNPTQV 495



 Score =  105 bits (262), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 117/414 (28%), Positives = 172/414 (41%), Gaps = 69/414 (16%)

Query: 113 NMQITTGRYHT--LLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSA 170
           NM      +H+   L ++ +V++ G +  G LG+G  TT   + T++  P    VV ++A
Sbjct: 450 NMVAVAAGHHSSLALKADGTVWAWGDNANGQLGNG-STTDRSNPTQV--PGLTGVVSIAA 506

Query: 171 SENHAAFVLQSGQVFTCGDNSSFCCGHRDT-NRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
              HA  V   G ++T GDN++   G   T +RPI  P  V  + GV    V AGL  + 
Sbjct: 507 GPGHALAVKADGTLWTWGDNNTGQLGDGTTVDRPI--PTQVPGVTGVVS--VAAGLYHSL 562

Query: 230 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 289
            + + G V   GSN  GQLG G T  RP P     L     VV I AG  + LA+  +G 
Sbjct: 563 VVKVDGTVWAWGSNYEGQLGGGTTTIRPVPSQTPNLT---GVVAITAGLYHSLALKTDGT 619

Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 349
           V+++G   +  LG+G    +  P  +  F       V + AG  H +A+ + G V+TWG 
Sbjct: 620 VWAWGYNLHGQLGNGNTTTQQVPTQVPGFSGG----VSLGAGIYHSLAIKTDGSVWTWGY 675

Query: 350 GYCGALGHGD-----------------------------EIDKTLPEPLSSLKSHL---- 376
            Y G LG G                                D T     S+ K  L    
Sbjct: 676 NYRGQLGDGTTTSRTTPTQVAGFTGVSFLAAGEFHSVALRTDGTAWAWGSNDKGQLGDGS 735

Query: 377 --------------AVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPR 422
                         A  + A  R T      G+V+ +G   +G LG    G +     P 
Sbjct: 736 ARWHYAPTLSRLVGARGLAAGDRFTAARKSDGTVWAWGDNTYGQLG---DGTTLATRSPA 792

Query: 423 ILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 476
            +  L    V  ++ G  H VVV   G ++ +G+N + QLG  T    L PT++
Sbjct: 793 QVSGLT--DVEGLAAGEGHVVVVKMDGTVWTWGNNAKGQLGDGTTTRRLVPTQV 844



 Score =  105 bits (261), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 108/364 (29%), Positives = 160/364 (43%), Gaps = 32/364 (8%)

Query: 120  RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 179
            R+     S+ +V++ G +  G LG G   T   + +         V  ++A E H   V 
Sbjct: 758  RFTAARKSDGTVWAWGDNTYGQLGDG---TTLATRSPAQVSGLTDVEGLAAGEGHVVVVK 814

Query: 180  QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 239
              G V+T G+N+    G   T R +  P  V  L GV    V AG   +  L   G V  
Sbjct: 815  MDGTVWTWGNNAKGQLGDGTTTRRLV-PTQVPGLTGVVA--VAAGYAHSLALKADGTVWG 871

Query: 240  CGSNTHGQLGHGDTLDRPTPKSIAPLEEVG--SVVQIAAGPSYMLAVTGNGVVYSFGSGS 297
             G N +GQLG G T  R     +AP +  G   V+ +A+G  + LA   +G ++++G  +
Sbjct: 872  WGENIYGQLGDGTTTQR-----VAPTQAQGLTVVLSMASGTYHGLARKADGTLWAWGYNA 926

Query: 298  NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 357
            +  LG G     L P  + +       VV +SA  +H +AL   G V+ WG    G LG 
Sbjct: 927  HGQLGIGTTTTRLAPTLVPSLS----GVVSLSATHQHSLALKPDGTVWAWGYNSNGQLGD 982

Query: 358  GDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRG-VSD 416
            G    + +P    SL S  A  V A    +  +   G+V+        S G  DRG +  
Sbjct: 983  GTTTTRHVPTQAPSLSSVKA--VSAGFEYSLAVKADGTVW--------SWGINDRGQLGS 1032

Query: 417  KVLRPRILDSLRA--HHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH-DTLRGCLEP 473
                PR   +  A  + V+ +     H +VV+  G + GFGDNE  QLG  DTL   L P
Sbjct: 1033 GTATPRATPTQVAGLNSVTLLLAARAHALVVSADGTMRGFGDNEAGQLGAGDTLI-RLAP 1091

Query: 474  TEIF 477
             +++
Sbjct: 1092 NQVW 1095



 Score = 94.7 bits (234), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 104/366 (28%), Positives = 153/366 (41%), Gaps = 22/366 (6%)

Query: 112 GNMQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSA 170
           G + IT G YH+L L ++ +V++ G +L G LG+G  TTQ V       P  +  V + A
Sbjct: 600 GVVAITAGLYHSLALKTDGTVWAWGYNLHGQLGNGNTTTQQVP---TQVPGFSGGVSLGA 656

Query: 171 SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
              H+  +   G V+T G N     G   T       + V    GV    + AG   +  
Sbjct: 657 GIYHSLAIKTDGSVWTWGYNYRGQLGDGTTTSRTTPTQ-VAGFTGVSF--LAAGEFHSVA 713

Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 290
           L   G     GSN  GQLG G       P     L  +     +AAG  +  A   +G V
Sbjct: 714 LRTDGTAWAWGSNDKGQLGDGSARWHYAPT----LSRLVGARGLAAGDRFTAARKSDGTV 769

Query: 291 YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKG 350
           +++G  +   LG G       P  +         V  ++AG+ HVV +   G V+TWG  
Sbjct: 770 WAWGDNTYGQLGDGTTLATRSPAQVSGL----TDVEGLAAGEGHVVVVKMDGTVWTWGNN 825

Query: 351 YCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFP 410
             G LG G    + +P  +  L     V V A    +  L   G+V+G+G   +G LG  
Sbjct: 826 AKGQLGDGTTTRRLVPTQVPGLTG--VVAVAAGYAHSLALKADGTVWGWGENIYGQLG-- 881

Query: 411 DRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGC 470
             G + + + P     L    V  +++G YH +     G L+ +G N   QLG  T    
Sbjct: 882 -DGTTTQRVAPTQAQGLTV--VLSMASGTYHGLARKADGTLWAWGYNAHGQLGIGTTTTR 938

Query: 471 LEPTEI 476
           L PT +
Sbjct: 939 LAPTLV 944



 Score = 79.7 bits (195), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 75/257 (29%), Positives = 114/257 (44%), Gaps = 16/257 (6%)

Query: 221 VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 280
           V AG + T  +   G V   G N +GQLG+G   D+  P     L  + +V    AG  +
Sbjct: 53  VAAGRHHTLAVRSDGTVWAWGDNAYGQLGNGSLQDQRVPVRAWGLWNISAV---GAGDLH 109

Query: 281 MLAVTGNGVVYSFGSGSNFC-LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 339
            LA+  +G V+++G G+NF  LG G       P  +         VVRV+AG  H +AL 
Sbjct: 110 SLAMKSDGTVWTWG-GNNFGQLGDGTTTGRQAPVQVPGLGE----VVRVAAGFSHSLALK 164

Query: 340 SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGF 399
           + G V+ WG    G LG G    + +P  +  L +  A  + A    +  L  TG V+ +
Sbjct: 165 TDGTVWAWGSNGAGRLGDGTTTQRLMPVQVQGLPTIKA--IAAGNAHSLALDGTGRVWAW 222

Query: 400 GWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNER 459
           G    G LG    G     + P ++  L   + + +S G  H++V    G  + +G N  
Sbjct: 223 GSNSNGQLGDTTAGYR---MLPALVPGLT--NATGLSAGSNHSLVRQADGTTWVWGANTY 277

Query: 460 AQLGHDTLRGCLEPTEI 476
            QLG  T      P ++
Sbjct: 278 GQLGDGTTTSRSAPQQV 294


>gi|442317911|ref|YP_007357932.1| RCC1 repeat-containing protein [Myxococcus stipitatus DSM 14675]
 gi|441485553|gb|AGC42248.1| RCC1 repeat-containing protein [Myxococcus stipitatus DSM 14675]
          Length = 1451

 Score =  114 bits (286), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 121/434 (27%), Positives = 181/434 (41%), Gaps = 86/434 (19%)

Query: 98  QSVEHSSDIVETSAGNMQITTGRYHTL-LISNSSVFSCGSSLCGVLGHG-----PETTQC 151
           Q V   SD+V  +AG        +H+L L ++ +V++ GS+  G LG G     P   Q 
Sbjct: 143 QKVPGLSDVVAVAAG-------EFHSLALRADGTVWAWGSNFYGQLGRGHSQPGPSPAQV 195

Query: 152 VSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVE 211
           V  T         VV ++A  + +  V   G V+  G N S   G   T      P  V 
Sbjct: 196 VGLT--------GVVALAAGFDFSLAVRSDGTVWAWGANGSGQLGD-GTYIQRLAPTQVS 246

Query: 212 ALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTP---------KSI 262
            L+GV    VTAGL     L   G V   GSN+ GQ+G G   DRP+P         K++
Sbjct: 247 QLQGVSA--VTAGLYHALALRSDGTVWAWGSNSSGQMGDGTWTDRPSPVQVTSIARAKAV 304

Query: 263 A----------------------------------PL----EEVGSVVQIAAGPSYMLAV 284
           A                                  PL      +G+V  +AAG  + + +
Sbjct: 305 AAQDAGSLVLLDDGGVFAWGLNSQGQLGIGTTADSPLPVRVRGLGAVTSLAAGTQHAVVL 364

Query: 285 TGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
             +G ++++G G+   LGHG     L P  +        +V  V++G  H VA  S G V
Sbjct: 365 RADGTLWTWGHGATGQLGHGSSERMLSPEVVTRLS----NVASVASGSFHSVAALSDGSV 420

Query: 345 YTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGF 404
           +TWG+   G LG G   ++ LP  +  L     V V A    +F L   G+V+G+G    
Sbjct: 421 WTWGRNTNGQLGDGTTTERHLPVRVPGLSG--VVSVSASGHHSFALRSDGTVWGWGRNAQ 478

Query: 405 GSLGFPDRGVSDKVLRPRI--LDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQL 462
           G +G  D    D+    R+  L S++A     +++G  H V +   G ++ +G N   QL
Sbjct: 479 GQMG--DGTTKDRASPARVEGLSSVKA-----LASGGSHMVALRTDGTVWTWGYNGAGQL 531

Query: 463 GHDTLRGCLEPTEI 476
           G  T      P ++
Sbjct: 532 GDGTTTDRRAPVQV 545



 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 112/361 (31%), Positives = 171/361 (47%), Gaps = 18/361 (4%)

Query: 119  GRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAF 177
            G  H L++S + +V++ G++  G LG G  TT   S  R+   SAA  + VS  + ++  
Sbjct: 907  GEAHALVVSQDGTVWAWGANGRGQLGDG-TTTSSASPVRVAGLSAA--MNVSVGQAYSLA 963

Query: 178  VLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHV 237
            VL  G V++ G N S   G   TN     P+ V+ L  V  K VTAG +    +   G V
Sbjct: 964  VLPDGTVWSWGANDSGQLGD-GTNVARTTPKPVQDLADV--KAVTAGAHHVVAVRHDGTV 1020

Query: 238  HTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 297
               G+N  GQ+G G    R  P  +   E + + V+ +AG  + LA+ G+    S+GS  
Sbjct: 1021 WGWGANAFGQVGDGTHFWRFRPVRV---EGLLNAVETSAGEQHSLALLGDERALSWGSHE 1077

Query: 298  NFCLGHGEQHDELQPRAIQTFRRKG-IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 356
               LG  E    L+P  ++    K  +  V VSA  +H  AL + G V TWG    G LG
Sbjct: 1078 YGQLGDAESGPSLEPVGVKLPSSKVLVPAVSVSAWHQHAAALLADGTVQTWGGNADGQLG 1137

Query: 357  HGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSD 416
             G    +  P  ++ L + +AV   A  R T  L   G+V+ +G   FG LG  D   + 
Sbjct: 1138 DGTTESRATPITVAGLGAMVAVAPAA--RHTLALRSDGTVWAWGDNTFGQLG--DGSNTR 1193

Query: 417  KVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 476
            + L  +++       V+ I+ G YH++ V + G ++ +G N   QLG  T+     PT +
Sbjct: 1194 RTLPVQVVG---LEKVTAIAAGSYHSLAVREDGTVWAWGYNVFGQLGDGTMDARAVPTRM 1250

Query: 477  F 477
             
Sbjct: 1251 L 1251



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 98/360 (27%), Positives = 148/360 (41%), Gaps = 62/360 (17%)

Query: 162 AAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVP-CKQ 220
           A+   +V+A   H+ +V Q+G V+  G N S   G   T    F+  + + + G+     
Sbjct: 47  ASATSKVAAGAQHSLYVTQAGTVWAWGGNGS---GQLGTGSVSFQRVVAQQVPGLTDVTS 103

Query: 221 VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSI------------------ 262
           + AG   +  L     V T G N  GQ+G G  +DRPTP+ +                  
Sbjct: 104 IAAGDAHSLALRADRTVWTWGGNNAGQVGDGTNVDRPTPQKVPGLSDVVAVAAGEFHSLA 163

Query: 263 ---------------------------APLEEVG--SVVQIAAGPSYMLAVTGNGVVYSF 293
                                      +P + VG   VV +AAG  + LAV  +G V+++
Sbjct: 164 LRADGTVWAWGSNFYGQLGRGHSQPGPSPAQVVGLTGVVALAAGFDFSLAVRSDGTVWAW 223

Query: 294 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 353
           G+  +  LG G     L P  +   +     V  V+AG  H +AL S G V+ WG    G
Sbjct: 224 GANGSGQLGDGTYIQRLAPTQVSQLQ----GVSAVTAGLYHALALRSDGTVWAWGSNSSG 279

Query: 354 ALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRG 413
            +G G   D+  P P+       A  V A+   + VL+D G V+ +G    G LG     
Sbjct: 280 QMGDGTWTDR--PSPVQVTSIARAKAVAAQDAGSLVLLDDGGVFAWGLNSQGQLGIGTTA 337

Query: 414 VSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEP 473
            S   +R R L +     V+ ++ G  H VV+   G L+ +G     QLGH +    L P
Sbjct: 338 DSPLPVRVRGLGA-----VTSLAAGTQHAVVLRADGTLWTWGHGATGQLGHGSSERMLSP 392



 Score = 99.0 bits (245), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 93/356 (26%), Positives = 154/356 (43%), Gaps = 22/356 (6%)

Query: 116  ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
            +T G +H + +  + +V+  G++  G +G G   T    F  +      + V+ SA E H
Sbjct: 1004 VTAGAHHVVAVRHDGTVWGWGANAFGQVGDG---THFWRFRPVRVEGLLNAVETSAGEQH 1060

Query: 175  AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRP---RLVEALKGVPCKQVTAGLNFTGFL 231
            +  +L   +  + G +     G  ++  P   P   +L  +   VP   V+A       L
Sbjct: 1061 SLALLGDERALSWGSHEYGQLGDAESG-PSLEPVGVKLPSSKVLVPAVSVSAWHQHAAAL 1119

Query: 232  TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
               G V T G N  GQLG G T  R TP ++A L   G++V +A    + LA+  +G V+
Sbjct: 1120 LADGTVQTWGGNADGQLGDGTTESRATPITVAGL---GAMVAVAPAARHTLALRSDGTVW 1176

Query: 292  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 351
            ++G  +   LG G       P  +    +    V  ++AG  H +A+   G V+ WG   
Sbjct: 1177 AWGDNTFGQLGDGSNTRRTLPVQVVGLEK----VTAIAAGSYHSLAVREDGTVWAWGYNV 1232

Query: 352  CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 411
             G LG G    + +P  +  L    AV V   +  + +L   G+++  G    G LG   
Sbjct: 1233 FGQLGDGTMDARAVPTRMLGLDG--AVAVAGGEYHSLMLRFDGTLWATGNNSHGQLG--- 1287

Query: 412  RGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTL 467
             G     L P     +    V  +  G YH+V + + G ++ +G N + QLG  T+
Sbjct: 1288 EGTFTNRLSP--FQVVELDQVRTVRAGGYHSVALREDGTVWTWGHNGQGQLGDGTV 1341



 Score = 96.3 bits (238), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 97/356 (27%), Positives = 157/356 (44%), Gaps = 24/356 (6%)

Query: 124 LLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQ 183
           +L+ +  VF+ G +  G LG G   T   S   +       V  ++A   HA  +   G 
Sbjct: 313 VLLDDGGVFAWGLNSQGQLGIG---TTADSPLPVRVRGLGAVTSLAAGTQHAVVLRADGT 369

Query: 184 VFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 243
           ++T G  ++   GH  + R +  P +V  L  V    V +G   +      G V T G N
Sbjct: 370 LWTWGHGATGQLGHGSSER-MLSPEVVTRLSNVAS--VASGSFHSVAALSDGSVWTWGRN 426

Query: 244 THGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH 303
           T+GQLG G T +R  P  +  L     VV ++A   +  A+  +G V+ +G  +   +G 
Sbjct: 427 TNGQLGDGTTTERHLPVRVPGLS---GVVSVSASGHHSFALRSDGTVWGWGRNAQGQMGD 483

Query: 304 GEQHDELQPRAIQTFRRKGIHVVR-VSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEID 362
           G   D   P      R +G+  V+ +++G  H+VAL + G V+TWG    G LG G   D
Sbjct: 484 GTTKDRASPA-----RVEGLSSVKALASGGSHMVALRTDGTVWTWGYNGAGQLGDGTTTD 538

Query: 363 KTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGF-GSLGFPDRGVSDKVLRP 421
           +  P  ++ L       V A    +  L   G+V+ +G  GF G LG    G   +   P
Sbjct: 539 RRAPVQVTGLSG--VTSVAAGAYFSLALRTDGTVWAWG-DGFEGQLG---DGAGVQRASP 592

Query: 422 RILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF 477
             +  L    V +++ G  H + V D G ++ +GDN   Q+G  +        +++
Sbjct: 593 VQVTGLT--RVVKLAAGAAHGLAVRDDGTVWAWGDNTEGQMGDGSWSDRFRAVQVY 646



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 103/364 (28%), Positives = 161/364 (44%), Gaps = 25/364 (6%)

Query: 103 SSDIVETSAGNMQITTGRYHTLL-ISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPS 161
           S ++V   +    + +G +H++  +S+ SV++ G +  G LG G  T + +    +  P 
Sbjct: 391 SPEVVTRLSNVASVASGSFHSVAALSDGSVWTWGRNTNGQLGDGTTTERHLP---VRVPG 447

Query: 162 AAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQV 221
            + VV VSAS +H+  +   G V+  G N+    G   T +    P  VE L  V  K +
Sbjct: 448 LSGVVSVSASGHHSFALRSDGTVWGWGRNAQGQMGD-GTTKDRASPARVEGLSSV--KAL 504

Query: 222 TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 281
            +G +    L   G V T G N  GQLG G T DR  P  +  L  V SV   AAG  + 
Sbjct: 505 ASGGSHMVALRTDGTVWTWGYNGAGQLGDGTTTDRRAPVQVTGLSGVTSV---AAGAYFS 561

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 341
           LA+  +G V+++G G    LG G       P  +    R    VV+++AG  H +A+   
Sbjct: 562 LALRTDGTVWAWGDGFEGQLGDGAGVQRASPVQVTGLTR----VVKLAAGAAHGLAVRDD 617

Query: 342 GYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGW 401
           G V+ WG    G +G G   D+     +  L       V      +  L   G++  +G 
Sbjct: 618 GTVWAWGDNTEGQMGDGSWSDRFRAVQVYGLTG--VSSVVGGLYHSMALAQDGTLRAWGG 675

Query: 402 MGFGSLGFPDRGVSDKVLRPRI--LDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNER 459
             +G   F D GV+ +V+   +  L  ++    S +     H + V + G L  +G N  
Sbjct: 676 NAYGQ--FGDGGVTPRVVAGAVPGLSGIKLLGASYL-----HVLAVREDGMLLTWGYNRF 728

Query: 460 AQLG 463
            QLG
Sbjct: 729 GQLG 732



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 77/284 (27%), Positives = 123/284 (43%), Gaps = 15/284 (5%)

Query: 194 CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGD- 252
           C G      P   P            +V AG   + ++T  G V   G N  GQLG G  
Sbjct: 26  CEGTSSPAEPSHPPAARSQALASATSKVAAGAQHSLYVTQAGTVWAWGGNGSGQLGTGSV 85

Query: 253 TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQP 312
           +  R   + +  L +V S   IAAG ++ LA+  +  V+++G  +   +G G   D   P
Sbjct: 86  SFQRVVAQQVPGLTDVTS---IAAGDAHSLALRADRTVWTWGGNNAGQVGDGTNVDRPTP 142

Query: 313 RAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSL 372
           + +         VV V+AG+ H +AL + G V+ WG  + G LG G    +  P P   +
Sbjct: 143 QKVPGLS----DVVAVAAGEFHSLALRADGTVWAWGSNFYGQLGRGHS--QPGPSPAQVV 196

Query: 373 KSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHV 432
                V + A    +  +   G+V+ +G  G G LG    G   + L P  +  L+   V
Sbjct: 197 GLTGVVALAAGFDFSLAVRSDGTVWAWGANGSGQLG---DGTYIQRLAPTQVSQLQG--V 251

Query: 433 SQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 476
           S ++ GLYH + +   G ++ +G N   Q+G  T      P ++
Sbjct: 252 SAVTAGLYHALALRSDGTVWAWGSNSSGQMGDGTWTDRPSPVQV 295



 Score = 80.1 bits (196), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 78/254 (30%), Positives = 116/254 (45%), Gaps = 20/254 (7%)

Query: 116  ITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
            I  G YH+L +  + +V++ G ++ G LG G    + V    +    A   V V+  E H
Sbjct: 1209 IAAGSYHSLAVREDGTVWAWGYNVFGQLGDGTMDARAVPTRMLGLDGA---VAVAGGEYH 1265

Query: 175  AAFVLQSGQVFTCGDNSSFCCGHRD-TNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
            +  +   G ++  G+NS    G    TNR    P  V  L  V  + V AG   +  L  
Sbjct: 1266 SLMLRFDGTLWATGNNSHGQLGEGTFTNR--LSPFQVVELDQV--RTVRAGGYHSVALRE 1321

Query: 234  RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
             G V T G N  GQLG G    R  P   AP+  + ++  + AG S+  AV      +++
Sbjct: 1322 DGTVWTWGHNGQGQLGDGTVTTRRVP---APVPGLTAIASVGAGTSHTFAVGSE--TWAW 1376

Query: 294  GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVR-VSAGDEHVVALDSSGYVYTWGKGYC 352
            G  S+  LG G+  D L+P  +     KG+H V+ V AG +  VA  + G   +WG    
Sbjct: 1377 GRNSHGQLGTGDSSDRLEPTLV-----KGLHGVKSVLAGGDFSVAQGADGSAMSWGTNVH 1431

Query: 353  GALGHGDEIDKTLP 366
            G LG G    +T+P
Sbjct: 1432 GTLGIGLPGQRTVP 1445



 Score = 78.6 bits (192), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 100/381 (26%), Positives = 154/381 (40%), Gaps = 29/381 (7%)

Query: 87  NGNWKRVLRFLQSVEHSSDIVETSAGNMQITTGRYHTL-LISNSSVFSCGSSLCGVLGHG 145
           +G+W    R +Q        V    G   +  G YH++ L  + ++ + G +  G  G G
Sbjct: 633 DGSWSDRFRAVQ--------VYGLTGVSSVVGGLYHSMALAQDGTLRAWGGNAYGQFGDG 684

Query: 146 PETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIF 205
             T + V+      P  + +  + AS  H   V + G + T G N     G         
Sbjct: 685 GVTPRVVAGA---VPGLSGIKLLGASYLHVLAVREDGMLLTWGYNRFGQLGLGAAGWSSL 741

Query: 206 RPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL 265
            P  V  L     ++++AG   +  +   G V   G NT GQLG G T  R +P     L
Sbjct: 742 -PVQVRGLG--QGRRLSAGRAHSLLVRADGTVLAWGQNTSGQLGDGSTTHRASPVLARNL 798

Query: 266 EEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHV 325
                    +AG  + L +  +G V+S+G  S   LG G       P  ++        V
Sbjct: 799 P---CARAASAGRQHSLVLACDGTVWSWGGNSQGQLGDGGVTSRAYPAKVEGL----WGV 851

Query: 326 VRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKR 385
           V V AG +  + L + G V+TWG    G LG G   D+  P  +  L + +A  V     
Sbjct: 852 VAVLAGGDSSMVLRADGTVWTWGANGSGQLGDGTLGDRASPLEVKGL-AGIATGVMGEAH 910

Query: 386 KTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVV 445
              V  D G+V+ +G  G G LG    G +     P  +  L A     +S G  +++ V
Sbjct: 911 ALVVSQD-GTVWAWGANGRGQLG---DGTTTSSASPVRVAGLSA--AMNVSVGQAYSLAV 964

Query: 446 TDRGRLFGFGDNERAQLGHDT 466
              G ++ +G N+  QLG  T
Sbjct: 965 LPDGTVWSWGANDSGQLGDGT 985



 Score = 78.2 bits (191), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 93/344 (27%), Positives = 140/344 (40%), Gaps = 22/344 (6%)

Query: 120  RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 179
            ++   L+++ +V + G +  G LG G   ++    T I       +V V+ +  H   + 
Sbjct: 1114 QHAAALLADGTVQTWGGNADGQLGDGTTESRA---TPITVAGLGAMVAVAPAARHTLALR 1170

Query: 180  QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 239
              G V+  GDN+    G     R    P  V  L+ V    + AG   +  +   G V  
Sbjct: 1171 SDGTVWAWGDNTFGQLGDGSNTRRTL-PVQVVGLEKVTA--IAAGSYHSLAVREDGTVWA 1227

Query: 240  CGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNF 299
             G N  GQLG G    R  P  +  L+     V +A G  + L +  +G +++ G+ S+ 
Sbjct: 1228 WGYNVFGQLGDGTMDARAVPTRMLGLD---GAVAVAGGEYHSLMLRFDGTLWATGNNSHG 1284

Query: 300  CLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGD 359
             LG G   + L P   Q      +  VR  AG  H VAL   G V+TWG    G LG G 
Sbjct: 1285 QLGEGTFTNRLSP--FQVVELDQVRTVR--AGGYHSVALREDGTVWTWGHNGQGQLGDGT 1340

Query: 360  EIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVL 419
               + +P P+  L +     V A    TF +      + +G    G LG  D   SD+ L
Sbjct: 1341 VTTRRVPAPVPGLTA--IASVGAGTSHTFAVGS--ETWAWGRNSHGQLGTGDS--SDR-L 1393

Query: 420  RPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 463
             P ++  L  H V  +  G   +V     G    +G N    LG
Sbjct: 1394 EPTLVKGL--HGVKSVLAGGDFSVAQGADGSAMSWGTNVHGTLG 1435



 Score = 72.0 bits (175), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 97/370 (26%), Positives = 156/370 (42%), Gaps = 27/370 (7%)

Query: 111 AGNMQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS 169
           +G   +  G Y +L L ++ +V++ G    G LG G    +    + +       VV+++
Sbjct: 549 SGVTSVAAGAYFSLALRTDGTVWAWGDGFEGQLGDGAGVQRA---SPVQVTGLTRVVKLA 605

Query: 170 ASENHAAFVLQSGQVFTCGDNSSFCCGHRD-TNRPIFRPRLVEALKGVPCKQVTAGLNFT 228
           A   H   V   G V+  GDN+    G    ++R  FR   V  L GV    V  GL  +
Sbjct: 606 AGAAHGLAVRDDGTVWAWGDNTEGQMGDGSWSDR--FRAVQVYGLTGV--SSVVGGLYHS 661

Query: 229 GFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM--LAVTG 286
             L   G +   G N +GQ G G    R    ++  L  +  +     G SY+  LAV  
Sbjct: 662 MALAQDGTLRAWGGNAYGQFGDGGVTPRVVAGAVPGLSGIKLL-----GASYLHVLAVRE 716

Query: 287 NGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYT 346
           +G++ ++G      LG G       P  ++   +      R+SAG  H + + + G V  
Sbjct: 717 DGMLLTWGYNRFGQLGLGAAGWSSLPVQVRGLGQG----RRLSAGRAHSLLVRADGTVLA 772

Query: 347 WGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGS 406
           WG+   G LG G    +  P    +L    A    A ++ + VL   G+V+ +G    G 
Sbjct: 773 WGQNTSGQLGDGSTTHRASPVLARNLP--CARAASAGRQHSLVLACDGTVWSWGGNSQGQ 830

Query: 407 LGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDT 466
           LG  D GV+ +   P  ++ L    V  +  G   ++V+   G ++ +G N   QLG  T
Sbjct: 831 LG--DGGVTSRAY-PAKVEGLWG--VVAVLAGGDSSMVLRADGTVWTWGANGSGQLGDGT 885

Query: 467 LRGCLEPTEI 476
           L     P E+
Sbjct: 886 LGDRASPLEV 895



 Score = 47.0 bits (110), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 45/148 (30%), Positives = 69/148 (46%), Gaps = 9/148 (6%)

Query: 116  ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
            +  G YH++ L  + +V++ G +  G LG G  TT+ V       P    +  V A  +H
Sbjct: 1309 VRAGGYHSVALREDGTVWTWGHNGQGQLGDGTVTTRRVP---APVPGLTAIASVGAGTSH 1365

Query: 175  AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 234
              F + S + +  G NS    G  D++  +  P LV+ L GV  K V AG +F+      
Sbjct: 1366 T-FAVGS-ETWAWGRNSHGQLGTGDSSDRL-EPTLVKGLHGV--KSVLAGGDFSVAQGAD 1420

Query: 235  GHVHTCGSNTHGQLGHGDTLDRPTPKSI 262
            G   + G+N HG LG G    R  P ++
Sbjct: 1421 GSAMSWGTNVHGTLGIGLPGQRTVPGAV 1448


>gi|449469320|ref|XP_004152369.1| PREDICTED: uncharacterized protein LOC101216037 [Cucumis sativus]
          Length = 1088

 Score =  114 bits (286), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 92/314 (29%), Positives = 145/314 (46%), Gaps = 23/314 (7%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V  +S    HAA + + G++F+ G       GH+  N  +  P+LV++L G+  K V  G
Sbjct: 302 VQSISLGGKHAALITKHGEIFSWGQGKCGRLGHK-INMDLDHPKLVDSLNGIAAKSVACG 360

Query: 225 LNFTGFLTIRGHVHTCGSNTHGQL--GHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSYM 281
              T  LT  G V+T G +  G       ++  R  P+ ++ PL+ + S+  +A G  + 
Sbjct: 361 EYQTCALTKAGEVYTWGDSRFGADFDCEENSRSRWLPQKLSGPLKGI-SISNVACGEWHT 419

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL--- 338
             V+  G ++++G G+   LGHG      QP+ +++    G+ V  V+ G  H  A+   
Sbjct: 420 AVVSACGRLFTYGDGTFGALGHGNLISLSQPKEVESLN--GLCVKSVACGSWHTAAIVDI 477

Query: 339 --------DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVL 390
                    + G ++TWG G  G LGHGD   K LP  ++ L      QV   +  T  L
Sbjct: 478 MIDRFKFKSAVGKLFTWGDGDKGKLGHGDNERKLLPTCVAPLVDCDFAQVSCGRMLTVGL 537

Query: 391 VDTGSVYGFGWMGFGSLG-FPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRG 449
            + G VY  G    G LG    R  S  ++  +    L+   V  IS+G YH   +T  G
Sbjct: 538 TNMGRVYTMGSSIHGQLGNLSSRDASVAIVEGK----LKEEFVKAISSGSYHVASLTSTG 593

Query: 450 RLFGFGDNERAQLG 463
           R++ +G     QLG
Sbjct: 594 RVYTWGKGAHGQLG 607



 Score = 95.9 bits (237), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 73/219 (33%), Positives = 105/219 (47%), Gaps = 15/219 (6%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           +  V+  E H A V   G++FT GD +    GH +    + +P+ VE+L G+  K V  G
Sbjct: 409 ISNVACGEWHTAVVSACGRLFTYGDGTFGALGHGNL-ISLSQPKEVESLNGLCVKSVACG 467

Query: 225 LNFTG-----------FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
              T            F +  G + T G    G+LGHGD   +  P  +APL +     Q
Sbjct: 468 SWHTAAIVDIMIDRFKFKSAVGKLFTWGDGDKGKLGHGDNERKLLPTCVAPLVDC-DFAQ 526

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           ++ G    + +T  G VY+ GS  +  LG+    D     AI   + K   V  +S+G  
Sbjct: 527 VSCGRMLTVGLTNMGRVYTMGSSIHGQLGNLSSRD--ASVAIVEGKLKEEFVKAISSGSY 584

Query: 334 HVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSL 372
           HV +L S+G VYTWGKG  G LG GD  D+ LP  + +L
Sbjct: 585 HVASLTSTGRVYTWGKGAHGQLGLGDSDDRNLPTFVEAL 623



 Score = 89.4 bits (220), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 88/358 (24%), Positives = 148/358 (41%), Gaps = 32/358 (8%)

Query: 119 GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSASENHAAF 177
           G++  L+  +  +FS G   CG LGH  +    +   + ++  +      V+  E     
Sbjct: 309 GKHAALITKHGEIFSWGQGKCGRLGH--KINMDLDHPKLVDSLNGIAAKSVACGEYQTCA 366

Query: 178 VLQSGQVFTCGDN---SSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 234
           + ++G+V+T GD+   + F C     +R + + +L   LKG+    V  G   T  ++  
Sbjct: 367 LTKAGEVYTWGDSRFGADFDCEENSRSRWLPQ-KLSGPLKGISISNVACGEWHTAVVSAC 425

Query: 235 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV---------- 284
           G + T G  T G LGHG+ +    PK +  L  +  V  +A G  +  A+          
Sbjct: 426 GRLFTYGDGTFGALGHGNLISLSQPKEVESLNGL-CVKSVACGSWHTAAIVDIMIDRFKF 484

Query: 285 -TGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 343
            +  G ++++G G    LGHG+   +L P  +           +VS G    V L + G 
Sbjct: 485 KSAVGKLFTWGDGDKGKLGHGDNERKLLPTCVAPLV--DCDFAQVSCGRMLTVGLTNMGR 542

Query: 344 VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 403
           VYT G    G LG+    D ++      LK      + +       L  TG VY +G   
Sbjct: 543 VYTMGSSIHGQLGNLSSRDASVAIVEGKLKEEFVKAISSGSYHVASLTSTGRVYTWGKGA 602

Query: 404 FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTG--------LYHTVVVTDRGRLFG 453
            G LG  D   SD    P  +++L    V  I+ G        L+ ++  +D+   +G
Sbjct: 603 HGQLGLGD---SDDRNLPTFVEALGDKQVESIACGSNFTAAICLHRSITSSDQSSCYG 657



 Score = 86.3 bits (212), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 72/276 (26%), Positives = 124/276 (44%), Gaps = 20/276 (7%)

Query: 207 PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 266
           P+L+E+   +  + ++ G      +T  G + + G    G+LGH   +D   PK +  L 
Sbjct: 291 PKLLESTMMLDVQSISLGGKHAALITKHGEIFSWGQGKCGRLGHKINMDLDHPKLVDSLN 350

Query: 267 EVGSVVQIAAGPSYMLAVTGNGVVYSFGS---GSNFCLGHGEQHDELQPRAIQTFRRKGI 323
            + +   +A G     A+T  G VY++G    G++F      +   L  +       KGI
Sbjct: 351 GIAAK-SVACGEYQTCALTKAGEVYTWGDSRFGADFDCEENSRSRWLPQKLSGPL--KGI 407

Query: 324 HVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCAR 383
            +  V+ G+ H   + + G ++T+G G  GALGHG+ I  + P+ + SL       V   
Sbjct: 408 SISNVACGEWHTAVVSACGRLFTYGDGTFGALGHGNLISLSQPKEVESLNGLCVKSVACG 467

Query: 384 KRKTFVLVD-----------TGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHV 432
              T  +VD            G ++ +G    G LG    G +++ L P  +  L     
Sbjct: 468 SWHTAAIVDIMIDRFKFKSAVGKLFTWGDGDKGKLG---HGDNERKLLPTCVAPLVDCDF 524

Query: 433 SQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLR 468
           +Q+S G   TV +T+ GR++  G +   QLG+ + R
Sbjct: 525 AQVSCGRMLTVGLTNMGRVYTMGSSIHGQLGNLSSR 560



 Score = 82.8 bits (203), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 50/169 (29%), Positives = 82/169 (48%), Gaps = 2/169 (1%)

Query: 308 DELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPE 367
           D L P+ +++     + V  +S G +H   +   G +++WG+G CG LGH   +D   P+
Sbjct: 287 DALLPKLLESTMM--LDVQSISLGGKHAALITKHGEIFSWGQGKCGRLGHKINMDLDHPK 344

Query: 368 PLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSL 427
            + SL    A  V   + +T  L   G VY +G   FG+    +     + L  ++   L
Sbjct: 345 LVDSLNGIAAKSVACGEYQTCALTKAGEVYTWGDSRFGADFDCEENSRSRWLPQKLSGPL 404

Query: 428 RAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 476
           +   +S ++ G +HT VV+  GRLF +GD     LGH  L    +P E+
Sbjct: 405 KGISISNVACGEWHTAVVSACGRLFTYGDGTFGALGHGNLISLSQPKEV 453



 Score = 75.5 bits (184), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 63/218 (28%), Positives = 100/218 (45%), Gaps = 19/218 (8%)

Query: 271 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 330
           V  I+ G  +   +T +G ++S+G G    LGH    D   P+ + +    GI    V+ 
Sbjct: 302 VQSISLGGKHAALITKHGEIFSWGQGKCGRLGHKINMDLDHPKLVDSLN--GIAAKSVAC 359

Query: 331 GDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKT--LPEPLS-SLKSHLAVQVCARKRKT 387
           G+    AL  +G VYTWG    GA    +E  ++  LP+ LS  LK      V   +  T
Sbjct: 360 GEYQTCALTKAGEVYTWGDSRFGADFDCEENSRSRWLPQKLSGPLKGISISNVACGEWHT 419

Query: 388 FVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTD 447
            V+   G ++ +G   FG+LG    G    + +P+ ++SL    V  ++ G +HT  + D
Sbjct: 420 AVVSACGRLFTYGDGTFGALG---HGNLISLSQPKEVESLNGLCVKSVACGSWHTAAIVD 476

Query: 448 -----------RGRLFGFGDNERAQLGHDTLRGCLEPT 474
                       G+LF +GD ++ +LGH      L PT
Sbjct: 477 IMIDRFKFKSAVGKLFTWGDGDKGKLGHGDNERKLLPT 514


>gi|351711665|gb|EHB14584.1| Putative E3 ubiquitin-protein ligase HERC3 [Heterocephalus glaber]
          Length = 1051

 Score =  114 bits (286), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 92/289 (31%), Positives = 137/289 (47%), Gaps = 41/289 (14%)

Query: 193 FCCGHRDTNRP---------IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 243
            C G+    +P         +  P++   +     K+V  G N + FL   G V+TCG N
Sbjct: 2   LCWGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLN 61

Query: 244 THGQLGHGDTLDRPTPKSIAPLEEVGS-----VVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
           T GQLGH    ++P        E++G+     ++ +A G S+ LA++  G ++S+G+GS+
Sbjct: 62  TKGQLGHEREGNKP--------EQIGALADQHIIHVACGESHSLALSDQGQLFSWGAGSD 113

Query: 299 FCLGHGEQHDELQ-PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 357
             LG     D +  PR IQ   ++ I  ++VS G+ H +AL + G  +TWGK   G LG 
Sbjct: 114 GQLGLMTTEDSVAVPRLIQKLNQQTI--LQVSCGNWHCLALAADGQFFTWGKNSHGQLGL 171

Query: 358 GDEI-DKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD----- 411
           G E   +  P+ + SL+     QV A    +F L  +G+V+G+G    G LG  D     
Sbjct: 172 GKEFSSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKGIK 231

Query: 412 RGVSDKVLRPRILDS----------LRAHHVSQISTGLYHTVVVTDRGR 450
           +G  DK    R L S          LR   V  IS G  HT V+T   R
Sbjct: 232 QGALDKTENIRGLYSNRESPCHVKLLRTQKVVYISCGDEHTAVLTKEHR 280



 Score = 88.6 bits (218), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 67/216 (31%), Positives = 113/216 (52%), Gaps = 17/216 (7%)

Query: 159 FPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVP 217
           F S   V +V+   NH+ F+L+ G+V+TCG N+    GH R+ N    +P  + AL    
Sbjct: 30  FISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGN----KPEQIGALADQH 85

Query: 218 CKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDR-PTPKSIAPLEEVGSVVQIAA 276
              V  G + +  L+ +G + + G+ + GQLG   T D    P+ I  L +  +++Q++ 
Sbjct: 86  IIHVACGESHSLALSDQGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQ-QTILQVSC 144

Query: 277 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH-DELQPRAIQTFRRKGIHVVRVSAGDEHV 335
           G  + LA+  +G  +++G  S+  LG G++   +  P+ +++   +GI + +V+AG  H 
Sbjct: 145 GNWHCLALAADGQFFTWGKNSHGQLGLGKEFSSQASPQRVRSL--EGIPLAQVAAGGAHS 202

Query: 336 VALDSSGYVYTWGKGYCGALGHGDE-------IDKT 364
            AL  SG V+ WG    G LG  DE       +DKT
Sbjct: 203 FALSLSGAVFGWGMNNAGQLGLSDEKGIKQGALDKT 238



 Score = 80.9 bits (198), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 64/237 (27%), Positives = 108/237 (45%), Gaps = 21/237 (8%)

Query: 119 GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
           G +   L+ +  V++CG +  G LGH  E  +     +I   +  H++ V+  E+H+  +
Sbjct: 43  GNHSVFLLEDGEVYTCGLNTKGQLGHEREGNKP---EQIGALADQHIIHVACGESHSLAL 99

Query: 179 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVH 238
              GQ+F+ G  S    G   T   +  PRL++ L      QV+ G      L   G   
Sbjct: 100 SDQGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFF 159

Query: 239 TCGSNTHGQLGHGDTL-DRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 297
           T G N+HGQLG G     + +P+ +  LE +  + Q+AAG ++  A++ +G V+ +G  +
Sbjct: 160 TWGKNSHGQLGLGKEFSSQASPQRVRSLEGI-PLAQVAAGGAHSFALSLSGAVFGWGMNN 218

Query: 298 NFCLGHGEQHDELQPRAIQTFRRKGIH----------------VVRVSAGDEHVVAL 338
              LG  ++    Q    +T   +G++                VV +S GDEH   L
Sbjct: 219 AGQLGLSDEKGIKQGALDKTENIRGLYSNRESPCHVKLLRTQKVVYISCGDEHTAVL 275



 Score = 68.6 bits (166), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 53/201 (26%), Positives = 91/201 (45%), Gaps = 7/201 (3%)

Query: 270 SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS 329
           SV ++A G ++ + +  +G VY+ G  +   LGH  + +  +P  I     +  H++ V+
Sbjct: 35  SVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGN--KPEQIGALADQ--HIIHVA 90

Query: 330 AGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKT-LPEPLSSLKSHLAVQVCARKRKTF 388
            G+ H +AL   G +++WG G  G LG     D   +P  +  L     +QV        
Sbjct: 91  CGESHSLALSDQGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCL 150

Query: 389 VLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDR 448
            L   G  + +G    G LG      S     P+ + SL    ++Q++ G  H+  ++  
Sbjct: 151 ALAADGQFFTWGKNSHGQLGLGKEFSSQA--SPQRVRSLEGIPLAQVAAGGAHSFALSLS 208

Query: 449 GRLFGFGDNERAQLGHDTLRG 469
           G +FG+G N   QLG    +G
Sbjct: 209 GAVFGWGMNNAGQLGLSDEKG 229


>gi|428178434|gb|EKX47309.1| hypothetical protein GUITHDRAFT_137494 [Guillardia theta CCMP2712]
          Length = 432

 Score =  114 bits (286), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 87/295 (29%), Positives = 146/295 (49%), Gaps = 16/295 (5%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCG--DNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 222
           + +V+    H+  V +SG++ TCG  DN     G+ +        +  E++       V 
Sbjct: 106 IKKVACGGAHSMIVTESGRLLTCGLNDNGQLGLGNLENASEFEEVKGTESIA-----DVA 160

Query: 223 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPT--PKSIAPLEEVGSVVQIAAGPSY 280
           AG   T   + +G ++  GSN HGQLGH DT  +    P+ I  L +   + Q+A G  +
Sbjct: 161 AGFWHTLAASKKGKLYAWGSNKHGQLGHHDTAVKLAVEPQEILLLRDA-PIKQVACGSYH 219

Query: 281 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 340
            +A+T +G VY++G G++  LGHG   DE  P+ ++     G ++  + AG E+  A+ +
Sbjct: 220 SMALTKDGEVYTWGFGAHGRLGHGSTEDEFMPKRVEALV--GENISSIHAGFEYSSAVST 277

Query: 341 SGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 400
           SG V+ WG G+   LG GD+ D+  P  L    S    Q+         +  +G ++ +G
Sbjct: 278 SGKVFVWGYGHFYVLGQGDKKDQLAPVVLDFPTS--IRQLAFGSFHAAAVSHSGMLFTWG 335

Query: 401 WMGFGSLGFPDRGVSDKVLRPRILDS-LRAHHVSQISTGLYHTVVVTDRGRLFGF 454
               G LG   +   + +L P +LD+  +  +  Q++ G  HT+VVT  G +F F
Sbjct: 336 HATHGPLGHGLKS-PNIILEPTVLDAPAQLQNSKQVACGSQHTLVVTGTGDVFSF 389



 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 85/291 (29%), Positives = 136/291 (46%), Gaps = 15/291 (5%)

Query: 115 QITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
           ++  G  H+++++ S  + +CG +  G LG G        F  +       +  V+A   
Sbjct: 108 KVACGGAHSMIVTESGRLLTCGLNDNGQLGLG-NLENASEFEEVK--GTESIADVAAGFW 164

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTN-RPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
           H     + G+++  G N     GH DT  +    P+ +  L+  P KQV  G   +  LT
Sbjct: 165 HTLAASKKGKLYAWGSNKHGQLGHHDTAVKLAVEPQEILLLRDAPIKQVACGSYHSMALT 224

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG-SVVQIAAGPSYMLAVTGNGVVY 291
             G V+T G   HG+LGHG T D   PK +  L  VG ++  I AG  Y  AV+ +G V+
Sbjct: 225 KDGEVYTWGFGAHGRLGHGSTEDEFMPKRVEAL--VGENISSIHAGFEYSSAVSTSGKVF 282

Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 351
            +G G  + LG G++ D+L P  +         + +++ G  H  A+  SG ++TWG   
Sbjct: 283 VWGYGHFYVLGQGDKKDQLAPVVLDF----PTSIRQLAFGSFHAAAVSHSGMLFTWGHAT 338

Query: 352 CGALGHGDEIDKTLPEPL---SSLKSHLAVQVCARKRKTFVLVDTGSVYGF 399
            G LGHG +    + EP    +  +   + QV    + T V+  TG V+ F
Sbjct: 339 HGPLGHGLKSPNIILEPTVLDAPAQLQNSKQVACGSQHTLVVTGTGDVFSF 389



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 90/289 (31%), Positives = 137/289 (47%), Gaps = 27/289 (9%)

Query: 200 TNRPIFR-----PRLVE--ALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGD 252
           T+ PIF      P  VE   L     K+V  G   +  +T  G + TCG N +GQLG G+
Sbjct: 81  TDAPIFEVIQKEPEKVEKPVLPAKLIKKVACGGAHSMIVTESGRLLTCGLNDNGQLGLGN 140

Query: 253 TLDRPTPKSIAPLEEVG---SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDE 309
                  ++ +  EEV    S+  +AAG  + LA +  G +Y++GS  +  LGH +   +
Sbjct: 141 L------ENASEFEEVKGTESIADVAAGFWHTLAASKKGKLYAWGSNKHGQLGHHDTAVK 194

Query: 310 L--QPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPE 367
           L  +P+ I   R   I   +V+ G  H +AL   G VYTWG G  G LGHG   D+ +P+
Sbjct: 195 LAVEPQEILLLRDAPIK--QVACGSYHSMALTKDGEVYTWGFGAHGRLGHGSTEDEFMPK 252

Query: 368 PLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSL 427
            + +L       + A    +  +  +G V+ +G+  F  LG  D+      L P +LD  
Sbjct: 253 RVEALVGENISSIHAGFEYSSAVSTSGKVFVWGYGHFYVLGQGDK---KDQLAPVVLDFP 309

Query: 428 RAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH--DTLRGCLEPT 474
            +  + Q++ G +H   V+  G LF +G      LGH   +    LEPT
Sbjct: 310 TS--IRQLAFGSFHAAAVSHSGMLFTWGHATHGPLGHGLKSPNIILEPT 356



 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 64/235 (27%), Positives = 102/235 (43%), Gaps = 15/235 (6%)

Query: 99  SVEHSSDIVETSAGNMQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRI 157
           +VE    ++   A   Q+  G YH++ L  +  V++ G    G LGHG    + +   R+
Sbjct: 196 AVEPQEILLLRDAPIKQVACGSYHSMALTKDGEVYTWGFGAHGRLGHGSTEDEFMP-KRV 254

Query: 158 NFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVP 217
                 ++  + A   +++ V  SG+VF  G    +  G  D      + +L   +   P
Sbjct: 255 EALVGENISSIHAGFEYSSAVSTSGKVFVWGYGHFYVLGQGDK-----KDQLAPVVLDFP 309

Query: 218 C--KQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPT----PKSIAPLEEVGSV 271
              +Q+  G      ++  G + T G  THG LGHG  L  P     P  +    ++ + 
Sbjct: 310 TSIRQLAFGSFHAAAVSHSGMLFTWGHATHGPLGHG--LKSPNIILEPTVLDAPAQLQNS 367

Query: 272 VQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVV 326
            Q+A G  + L VTG G V+SFG G    LG G   D  +P+ I  F  K +  V
Sbjct: 368 KQVACGSQHTLVVTGTGDVFSFGLGGQGQLGLGSDLDHYEPKQIPRFVGKSLRQV 422



 Score = 52.0 bits (123), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 40/159 (25%), Positives = 77/159 (48%), Gaps = 16/159 (10%)

Query: 331 GDEHVVALDSSGYVYTWGK---GYCGALGHGD----EIDKTLPEPLSS--LKSHLAVQVC 381
           G E  V L  +  +++WG    G  G+ GH D    E+ +  PE +    L + L  +V 
Sbjct: 51  GREQKVTLAGARTLWSWGSADHGRGGSGGHTDAPIFEVIQKEPEKVEKPVLPAKLIKKVA 110

Query: 382 ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYH 441
                + ++ ++G +   G    G LG  +   + +    +  +S     ++ ++ G +H
Sbjct: 111 CGGAHSMIVTESGRLLTCGLNDNGQLGLGNLENASEFEEVKGTES-----IADVAAGFWH 165

Query: 442 TVVVTDRGRLFGFGDNERAQLG-HDT-LRGCLEPTEIFI 478
           T+  + +G+L+ +G N+  QLG HDT ++  +EP EI +
Sbjct: 166 TLAASKKGKLYAWGSNKHGQLGHHDTAVKLAVEPQEILL 204


>gi|330822422|ref|XP_003291651.1| hypothetical protein DICPUDRAFT_156281 [Dictyostelium purpureum]
 gi|325078150|gb|EGC31817.1| hypothetical protein DICPUDRAFT_156281 [Dictyostelium purpureum]
          Length = 453

 Score =  114 bits (286), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 101/392 (25%), Positives = 173/392 (44%), Gaps = 41/392 (10%)

Query: 127 SNSSVFSCGSSLCGVLGHGPETTQCVSF----TRIN----------FPSAAHVVQVSASE 172
           +N  ++SCG  + G LG   E  +  SF    T+ +          +        +    
Sbjct: 45  TNKYLYSCGCGIDGKLGIDNELVKFESFPTKLTKFDNGENNGASQRYQDNLECKDIVCGH 104

Query: 173 NHAAFV-LQSGQVFTCGDNSSFCCG--HRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
            H   V  +  Q+++CG  S       +++TN     P LV  LK    KQV  G   T 
Sbjct: 105 YHTMLVSKEKDQLYSCGWTSFVAMDRVNKETNFKSIIPSLVTPLKDFKIKQVAGGRRHTL 164

Query: 230 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 289
            LT    V + G  +  QLG G T ++P P  I  L ++G+++++  G  + L +T +G 
Sbjct: 165 VLTEDFRVFSFGVGSEYQLGVGSTENQPLPVEIESLSKLGNIIKLECGWGHSLVLTSDGD 224

Query: 290 VYSFGSGSNFCLGHGEQHDELQ-PRAIQT-FRRKGIHVVRVSAGDEHVVALDSSGYVYTW 347
           ++++G   +   GHG   + +  P+ I+T ++ K I       G +  +A+ + G V +W
Sbjct: 225 IFTWGFTQDSQTGHGFSEEPIHIPKMIKTNYKFKNIF-----TGSDFNLAITNDGRVCSW 279

Query: 348 GKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKR------------KTFVLVDTGS 395
           G G  G LGHGD  +   P+ + S++  +   +    R               ++ + G 
Sbjct: 280 GSGEFGQLGHGDTKNVEAPKLIQSIQPLVHTNLINTNRIYEYKMVACGFSHALIIDNDGK 339

Query: 396 VYGFGWMGFGSLGFPDRGVSDKVLRPRILD-SLRAHHVSQISTGLYHTVVVTDRGRLFGF 454
           +   GW G G LG   +G  D  L P  L+       V ++S G  H+  +T+ G+L+ +
Sbjct: 340 LLTLGWNGNGQLGSGVKG--DNHLVPTKLEFDFDGEKVVKVSAGRNHSACITESGKLYIW 397

Query: 455 GDNERAQLGHDTLRG-CLEPTEIF-IQEMEED 484
           G+  + +LG+    G  L P E+  I E   D
Sbjct: 398 GNGNKGKLGNGKSVGDQLTPLELIDIDENNTD 429



 Score =  102 bits (254), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 81/275 (29%), Positives = 123/275 (44%), Gaps = 17/275 (6%)

Query: 115 QITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
           Q+  GR HTL+++    VFS G      LG G    Q +     +     +++++     
Sbjct: 155 QVAGGRRHTLVLTEDFRVFSFGVGSEYQLGVGSTENQPLPVEIESLSKLGNIIKLECGWG 214

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
           H+  +   G +FT G       GH  +  PI  P++++       K +  G +F   +T 
Sbjct: 215 HSLVLTSDGDIFTWGFTQDSQTGHGFSEEPIHIPKMIKT--NYKFKNIFTGSDFNLAITN 272

Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPTPK---SIAPL--------EEVGSVVQIAAGPSYML 282
            G V + GS   GQLGHGDT +   PK   SI PL          +     +A G S+ L
Sbjct: 273 DGRVCSWGSGEFGQLGHGDTKNVEAPKLIQSIQPLVHTNLINTNRIYEYKMVACGFSHAL 332

Query: 283 AVTGNGVVYSFGSGSNFCLGHGEQHDE-LQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 341
            +  +G + + G   N  LG G + D  L P  ++ F   G  VV+VSAG  H   +  S
Sbjct: 333 IIDNDGKLLTLGWNGNGQLGSGVKGDNHLVPTKLE-FDFDGEKVVKVSAGRNHSACITES 391

Query: 342 GYVYTWGKGYCGALGHGDEI-DKTLPEPLSSLKSH 375
           G +Y WG G  G LG+G  + D+  P  L  +  +
Sbjct: 392 GKLYIWGNGNKGKLGNGKSVGDQLTPLELIDIDEN 426


>gi|302810693|ref|XP_002987037.1| hypothetical protein SELMODRAFT_125311 [Selaginella moellendorffii]
 gi|300145202|gb|EFJ11880.1| hypothetical protein SELMODRAFT_125311 [Selaginella moellendorffii]
          Length = 228

 Score =  114 bits (286), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 75/225 (33%), Positives = 113/225 (50%), Gaps = 9/225 (4%)

Query: 241 GSNTHGQLGHGDT---LDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 297
           G    GQLG  D       P P+ +    E+   V++A G S+ LA+TG+G VYSFG G+
Sbjct: 5   GCGEFGQLGLKDAAGVFTSPLPRFLRGSREL-LFVRVACGSSHTLALTGSGDVYSFGQGT 63

Query: 298 NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 357
              LGHG       P  + +    G+ +V+++ GD H  AL   G +++WG+G  G LG 
Sbjct: 64  FGALGHGTTESCSSPVIVDSLW--GLGIVQIACGDNHSCALTVEGQLFSWGRGKYGQLGC 121

Query: 358 GDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDK 417
           G   +   P P+++L   L  QV      T  +   G +  F W G G  G    G  D 
Sbjct: 122 GSVENHLQPVPVTALSDRLLTQVVCGADYTMAIDSDGQL--FSW-GHGHWGQTGHGTQDN 178

Query: 418 VLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQL 462
           +L P+++ SL   ++ Q S G  H V +T  G ++ +GDNE+ Q+
Sbjct: 179 ILVPKLVCSLENDNIVQASAGARHAVALTSGGGVYAWGDNEQGQV 223



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 56/184 (30%), Positives = 91/184 (49%), Gaps = 4/184 (2%)

Query: 166 VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 225
           V+V+   +H   +  SG V++ G  +    GH  T      P +V++L G+   Q+  G 
Sbjct: 38  VRVACGSSHTLALTGSGDVYSFGQGTFGALGH-GTTESCSSPVIVDSLWGLGIVQIACGD 96

Query: 226 NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 285
           N +  LT+ G + + G   +GQLG G   +   P  +  L +   + Q+  G  Y +A+ 
Sbjct: 97  NHSCALTVEGQLFSWGRGKYGQLGCGSVENHLQPVPVTALSDR-LLTQVVCGADYTMAID 155

Query: 286 GNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVY 345
            +G ++S+G G     GHG Q + L P+ + +      ++V+ SAG  H VAL S G VY
Sbjct: 156 SDGQLFSWGHGHWGQTGHGTQDNILVPKLVCSLEND--NIVQASAGARHAVALTSGGGVY 213

Query: 346 TWGK 349
            WG 
Sbjct: 214 AWGD 217



 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 55/184 (29%), Positives = 89/184 (48%), Gaps = 8/184 (4%)

Query: 114 MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +++  G  HTL ++ S  V+S G    G LGHG  T  C S   ++      +VQ++  +
Sbjct: 38  VRVACGSSHTLALTGSGDVYSFGQGTFGALGHG-TTESCSSPVIVDSLWGLGIVQIACGD 96

Query: 173 NHAAFVLQSGQVFTCGDNS--SFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
           NH+  +   GQ+F+ G        CG  + +    +P  V AL      QV  G ++T  
Sbjct: 97  NHSCALTVEGQLFSWGRGKYGQLGCGSVENH---LQPVPVTALSDRLLTQVVCGADYTMA 153

Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 290
           +   G + + G    GQ GHG   +   PK +  LE   ++VQ +AG  + +A+T  G V
Sbjct: 154 IDSDGQLFSWGHGHWGQTGHGTQDNILVPKLVCSLEN-DNIVQASAGARHAVALTSGGGV 212

Query: 291 YSFG 294
           Y++G
Sbjct: 213 YAWG 216



 Score = 70.1 bits (170), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 52/174 (29%), Positives = 82/174 (47%), Gaps = 7/174 (4%)

Query: 312 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSS 371
           PR ++  R   +  VRV+ G  H +AL  SG VY++G+G  GALGHG     + P  + S
Sbjct: 26  PRFLRGSRE--LLFVRVACGSSHTLALTGSGDVYSFGQGTFGALGHGTTESCSSPVIVDS 83

Query: 372 LKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHH 431
           L     VQ+      +  L   G ++ +G   +G LG    G  +  L+P  + +L    
Sbjct: 84  LWGLGIVQIACGDNHSCALTVEGQLFSWGRGKYGQLGC---GSVENHLQPVPVTALSDRL 140

Query: 432 VSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQEMEEDT 485
           ++Q+  G  +T+ +   G+LF +G     Q GH T    L P    +  +E D 
Sbjct: 141 LTQVVCGADYTMAIDSDGQLFSWGHGHWGQTGHGTQDNILVPK--LVCSLENDN 192



 Score = 62.8 bits (151), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 44/136 (32%), Positives = 64/136 (47%), Gaps = 6/136 (4%)

Query: 344 VYTWGKGYCGALGHGDE---IDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 400
           + +WG G  G LG  D        LP  L   +  L V+V      T  L  +G VY FG
Sbjct: 1   LVSWGCGEFGQLGLKDAAGVFTSPLPRFLRGSRELLFVRVACGSSHTLALTGSGDVYSFG 60

Query: 401 WMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERA 460
              FG+LG    G ++    P I+DSL    + QI+ G  H+  +T  G+LF +G  +  
Sbjct: 61  QGTFGALG---HGTTESCSSPVIVDSLWGLGIVQIACGDNHSCALTVEGQLFSWGRGKYG 117

Query: 461 QLGHDTLRGCLEPTEI 476
           QLG  ++   L+P  +
Sbjct: 118 QLGCGSVENHLQPVPV 133


>gi|221113828|ref|XP_002154529.1| PREDICTED: RCC1 and BTB domain-containing protein 1-like, partial
           [Hydra magnipapillata]
          Length = 364

 Score =  114 bits (286), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 81/244 (33%), Positives = 123/244 (50%), Gaps = 9/244 (3%)

Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPS-YMLAVTGNGVVYS 292
            G V+  G N +G LG GD      PK I  L +   +VQ+A G   ++LAVT +G +YS
Sbjct: 40  NGDVYALGFNGNGCLGVGDGSSTLEPKIIEQLCQ-KDIVQLAYGMGPHVLAVTDSGELYS 98

Query: 293 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 352
           +G G    LGH     E + + +  + +K   V++V+ G  H +AL   G VY WG   C
Sbjct: 99  WGHGGYGQLGH---TSEEKSKPVLVYMQK--KVIQVACGSYHSIALTEDGEVYAWGSNNC 153

Query: 353 GALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDR 412
           G LG G   ++  P+ +S + S   V V   +  T +L   G +Y +G+ G G LG  + 
Sbjct: 154 GQLGLGISNNQATPKRVSLIPSKKIVSVSCGQSFTVMLTTDGELYSWGYNGNGQLGIENN 213

Query: 413 GVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLE 472
             ++++   R+  SL    + +I  G+ H +V+TD G L+ +G N   QLG  T      
Sbjct: 214 --TNQLQPVRVTGSLFGKFIEKIVCGMAHVLVLTDIGELYSWGANSYGQLGLGTTHNTSV 271

Query: 473 PTEI 476
           PT I
Sbjct: 272 PTLI 275



 Score = 79.0 bits (193), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 72/254 (28%), Positives = 120/254 (47%), Gaps = 8/254 (3%)

Query: 119 GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN-HAAF 177
           G    L ++N  V++ G +  G LG G + +  +    I       +VQ++     H   
Sbjct: 31  GNEALLTLTNGDVYALGFNGNGCLGVG-DGSSTLEPKIIEQLCQKDIVQLAYGMGPHVLA 89

Query: 178 VLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHV 237
           V  SG++++ G       GH    +   +P LV   K V   QV  G   +  LT  G V
Sbjct: 90  VTDSGELYSWGHGGYGQLGHTSEEKS--KPVLVYMQKKVI--QVACGSYHSIALTEDGEV 145

Query: 238 HTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 297
           +  GSN  GQLG G + ++ TPK ++ L     +V ++ G S+ + +T +G +YS+G   
Sbjct: 146 YAWGSNNCGQLGLGISNNQATPKRVS-LIPSKKIVSVSCGQSFTVMLTTDGELYSWGYNG 204

Query: 298 NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 357
           N  LG     ++LQP  + T    G  + ++  G  HV+ L   G +Y+WG    G LG 
Sbjct: 205 NGQLGIENNTNQLQPVRV-TGSLFGKFIEKIVCGMAHVLVLTDIGELYSWGANSYGQLGL 263

Query: 358 GDEIDKTLPEPLSS 371
           G   + ++P  +++
Sbjct: 264 GTTHNTSVPTLINT 277



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 39/150 (26%), Positives = 74/150 (49%), Gaps = 2/150 (1%)

Query: 114 MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +Q+  G YH++ L  +  V++ GS+ CG LG G    Q     R++   +  +V VS  +
Sbjct: 127 IQVACGSYHSIALTEDGEVYAWGSNNCGQLGLGISNNQATP-KRVSLIPSKKIVSVSCGQ 185

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
           +    +   G++++ G N +   G  +    +   R+  +L G   +++  G+     LT
Sbjct: 186 SFTVMLTTDGELYSWGYNGNGQLGIENNTNQLQPVRVTGSLFGKFIEKIVCGMAHVLVLT 245

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSI 262
             G +++ G+N++GQLG G T +   P  I
Sbjct: 246 DIGELYSWGANSYGQLGLGTTHNTSVPTLI 275


>gi|449484483|ref|XP_004156895.1| PREDICTED: uncharacterized protein LOC101227493 [Cucumis sativus]
          Length = 1077

 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 92/314 (29%), Positives = 145/314 (46%), Gaps = 23/314 (7%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V  +S    HAA + + G++F+ G       GH+  N  +  P+LV++L G+  K V  G
Sbjct: 322 VQSISLGGKHAALITKHGEIFSWGQGKCGRLGHK-INMDLDHPKLVDSLNGIAAKSVACG 380

Query: 225 LNFTGFLTIRGHVHTCGSNTHGQL--GHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSYM 281
              T  LT  G V+T G +  G       ++  R  P+ ++ PL+ + S+  +A G  + 
Sbjct: 381 EYQTCALTKAGEVYTWGDSRFGADFDCEENSRSRWLPQKLSGPLKGI-SISNVACGEWHT 439

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL--- 338
             V+  G ++++G G+   LGHG      QP+ +++    G+ V  V+ G  H  A+   
Sbjct: 440 AVVSACGRLFTYGDGTFGALGHGNLISLSQPKEVESLN--GLCVKSVACGSWHTAAIVDI 497

Query: 339 --------DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVL 390
                    + G ++TWG G  G LGHGD   K LP  ++ L      QV   +  T  L
Sbjct: 498 MIDRFKFKSAVGKLFTWGDGDKGKLGHGDNERKLLPTCVAPLVDCDFAQVSCGRMLTVGL 557

Query: 391 VDTGSVYGFGWMGFGSLG-FPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRG 449
            + G VY  G    G LG    R  S  ++  +    L+   V  IS+G YH   +T  G
Sbjct: 558 TNMGRVYTMGSSIHGQLGNLSSRDASVAIVEGK----LKEEFVKAISSGSYHVASLTSTG 613

Query: 450 RLFGFGDNERAQLG 463
           R++ +G     QLG
Sbjct: 614 RVYTWGKGAHGQLG 627



 Score = 95.9 bits (237), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 73/219 (33%), Positives = 105/219 (47%), Gaps = 15/219 (6%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           +  V+  E H A V   G++FT GD +    GH +    + +P+ VE+L G+  K V  G
Sbjct: 429 ISNVACGEWHTAVVSACGRLFTYGDGTFGALGHGNL-ISLSQPKEVESLNGLCVKSVACG 487

Query: 225 LNFTG-----------FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
              T            F +  G + T G    G+LGHGD   +  P  +APL +     Q
Sbjct: 488 SWHTAAIVDIMIDRFKFKSAVGKLFTWGDGDKGKLGHGDNERKLLPTCVAPLVDC-DFAQ 546

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           ++ G    + +T  G VY+ GS  +  LG+    D     AI   + K   V  +S+G  
Sbjct: 547 VSCGRMLTVGLTNMGRVYTMGSSIHGQLGNLSSRD--ASVAIVEGKLKEEFVKAISSGSY 604

Query: 334 HVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSL 372
           HV +L S+G VYTWGKG  G LG GD  D+ LP  + +L
Sbjct: 605 HVASLTSTGRVYTWGKGAHGQLGLGDSDDRNLPTFVEAL 643



 Score = 89.0 bits (219), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 88/358 (24%), Positives = 148/358 (41%), Gaps = 32/358 (8%)

Query: 119 GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSASENHAAF 177
           G++  L+  +  +FS G   CG LGH  +    +   + ++  +      V+  E     
Sbjct: 329 GKHAALITKHGEIFSWGQGKCGRLGH--KINMDLDHPKLVDSLNGIAAKSVACGEYQTCA 386

Query: 178 VLQSGQVFTCGDN---SSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 234
           + ++G+V+T GD+   + F C     +R + + +L   LKG+    V  G   T  ++  
Sbjct: 387 LTKAGEVYTWGDSRFGADFDCEENSRSRWLPQ-KLSGPLKGISISNVACGEWHTAVVSAC 445

Query: 235 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV---------- 284
           G + T G  T G LGHG+ +    PK +  L  +  V  +A G  +  A+          
Sbjct: 446 GRLFTYGDGTFGALGHGNLISLSQPKEVESLNGL-CVKSVACGSWHTAAIVDIMIDRFKF 504

Query: 285 -TGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 343
            +  G ++++G G    LGHG+   +L P  +           +VS G    V L + G 
Sbjct: 505 KSAVGKLFTWGDGDKGKLGHGDNERKLLPTCVAPLV--DCDFAQVSCGRMLTVGLTNMGR 562

Query: 344 VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 403
           VYT G    G LG+    D ++      LK      + +       L  TG VY +G   
Sbjct: 563 VYTMGSSIHGQLGNLSSRDASVAIVEGKLKEEFVKAISSGSYHVASLTSTGRVYTWGKGA 622

Query: 404 FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTG--------LYHTVVVTDRGRLFG 453
            G LG  D   SD    P  +++L    V  I+ G        L+ ++  +D+   +G
Sbjct: 623 HGQLGLGD---SDDRNLPTFVEALGDKQVESIACGSNFTAAICLHRSITSSDQSSCYG 677



 Score = 85.9 bits (211), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 72/276 (26%), Positives = 124/276 (44%), Gaps = 20/276 (7%)

Query: 207 PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 266
           P+L+E+   +  + ++ G      +T  G + + G    G+LGH   +D   PK +  L 
Sbjct: 311 PKLLESTMMLDVQSISLGGKHAALITKHGEIFSWGQGKCGRLGHKINMDLDHPKLVDSLN 370

Query: 267 EVGSVVQIAAGPSYMLAVTGNGVVYSFGS---GSNFCLGHGEQHDELQPRAIQTFRRKGI 323
            + +   +A G     A+T  G VY++G    G++F      +   L  +       KGI
Sbjct: 371 GIAAK-SVACGEYQTCALTKAGEVYTWGDSRFGADFDCEENSRSRWLPQKLSGPL--KGI 427

Query: 324 HVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCAR 383
            +  V+ G+ H   + + G ++T+G G  GALGHG+ I  + P+ + SL       V   
Sbjct: 428 SISNVACGEWHTAVVSACGRLFTYGDGTFGALGHGNLISLSQPKEVESLNGLCVKSVACG 487

Query: 384 KRKTFVLVD-----------TGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHV 432
              T  +VD            G ++ +G    G LG    G +++ L P  +  L     
Sbjct: 488 SWHTAAIVDIMIDRFKFKSAVGKLFTWGDGDKGKLG---HGDNERKLLPTCVAPLVDCDF 544

Query: 433 SQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLR 468
           +Q+S G   TV +T+ GR++  G +   QLG+ + R
Sbjct: 545 AQVSCGRMLTVGLTNMGRVYTMGSSIHGQLGNLSSR 580



 Score = 82.8 bits (203), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 50/169 (29%), Positives = 82/169 (48%), Gaps = 2/169 (1%)

Query: 308 DELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPE 367
           D L P+ +++     + V  +S G +H   +   G +++WG+G CG LGH   +D   P+
Sbjct: 307 DALLPKLLESTMM--LDVQSISLGGKHAALITKHGEIFSWGQGKCGRLGHKINMDLDHPK 364

Query: 368 PLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSL 427
            + SL    A  V   + +T  L   G VY +G   FG+    +     + L  ++   L
Sbjct: 365 LVDSLNGIAAKSVACGEYQTCALTKAGEVYTWGDSRFGADFDCEENSRSRWLPQKLSGPL 424

Query: 428 RAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 476
           +   +S ++ G +HT VV+  GRLF +GD     LGH  L    +P E+
Sbjct: 425 KGISISNVACGEWHTAVVSACGRLFTYGDGTFGALGHGNLISLSQPKEV 473



 Score = 75.1 bits (183), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 63/218 (28%), Positives = 100/218 (45%), Gaps = 19/218 (8%)

Query: 271 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 330
           V  I+ G  +   +T +G ++S+G G    LGH    D   P+ + +    GI    V+ 
Sbjct: 322 VQSISLGGKHAALITKHGEIFSWGQGKCGRLGHKINMDLDHPKLVDSLN--GIAAKSVAC 379

Query: 331 GDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKT--LPEPLS-SLKSHLAVQVCARKRKT 387
           G+    AL  +G VYTWG    GA    +E  ++  LP+ LS  LK      V   +  T
Sbjct: 380 GEYQTCALTKAGEVYTWGDSRFGADFDCEENSRSRWLPQKLSGPLKGISISNVACGEWHT 439

Query: 388 FVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTD 447
            V+   G ++ +G   FG+LG    G    + +P+ ++SL    V  ++ G +HT  + D
Sbjct: 440 AVVSACGRLFTYGDGTFGALG---HGNLISLSQPKEVESLNGLCVKSVACGSWHTAAIVD 496

Query: 448 -----------RGRLFGFGDNERAQLGHDTLRGCLEPT 474
                       G+LF +GD ++ +LGH      L PT
Sbjct: 497 IMIDRFKFKSAVGKLFTWGDGDKGKLGHGDNERKLLPT 534


>gi|383319251|ref|YP_005380092.1| chromosome condensation regulator RCC1 [Methanocella conradii
           HZ254]
 gi|379320621|gb|AFC99573.1| regulator of chromosome condensation RCC1 [Methanocella conradii
           HZ254]
          Length = 447

 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 108/370 (29%), Positives = 158/370 (42%), Gaps = 43/370 (11%)

Query: 125 LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQV 184
           L+ + SV+  G    GV    P+        R++    + V Q++A   H   +   G V
Sbjct: 43  LLEDGSVWQWGRVCDGVEWSAPQ--------RVDI---SGVRQIAAGSGHVLALKGDGTV 91

Query: 185 FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNT 244
           +  G NS    G   TN     P  V  L GV  K ++AG  F+  L   G V   GSNT
Sbjct: 92  WAWGSNSYGELGD-GTNENSIEPVQVAGLTGV--KAISAGKGFSLALKGDGSVWAWGSNT 148

Query: 245 HGQLGHGDT--LDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLG 302
           +GQLG      +   TP  +  LE    VV I+ G S+  A+  NGV++++G  S+  LG
Sbjct: 149 YGQLGKNPLSFMGSLTPIQVEGLE---GVVSISCGGSHCFALQENGVLWAWGENSHGILG 205

Query: 303 HGEQHDELQPRAIQTFRRKGIHVVRVSAGD-EHVVALDSSGYVYTWGKGYCGALGHGD-- 359
            G    + +P      + K   V    AG+  H +A+   G V+ WG  Y G LG G   
Sbjct: 206 DGTNESQFKP-----VKPKIKDVKAFDAGELSHALAVKEDGSVWAWGFNYKGQLGTGGVS 260

Query: 360 -----------EIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLG 408
                      E D   P+ +  +    A  V A    +  L   GSV+ +G    G LG
Sbjct: 261 LSDQGRISLGREADNYNPDIVRGVSDAKA--VAAGGSHSVALASDGSVWAWGSNSDGQLG 318

Query: 409 FPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLR 468
               G SD V  P  +  +    V+ I+ G+YHT+ +   G ++ +G N   QLG+ +  
Sbjct: 319 LGHAGGSD-VTSPTRVQGIEG--VTAIAAGMYHTLALKGDGSVWAWGSNSDGQLGNASFS 375

Query: 469 GCLEPTEIFI 478
               P  I I
Sbjct: 376 AASSPVPILI 385


>gi|327259202|ref|XP_003214427.1| PREDICTED: serine/threonine-protein kinase Nek9-like [Anolis
           carolinensis]
          Length = 965

 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 84/275 (30%), Positives = 125/275 (45%), Gaps = 21/275 (7%)

Query: 207 PRLVEALKG-VPCKQVTAGLNFTGFLTIRGHVHTC-----GSNTHGQLGHGDTLDRPTPK 260
           P+ ++ +KG    +QV AG      +T+   ++T      G+  HGQLGHGD      PK
Sbjct: 352 PQKLDVIKGGCSARQVCAGNTHFALVTVEKELYTWVNMQGGTKLHGQLGHGDKASYRQPK 411

Query: 261 SIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ--HDELQPRAIQTF 318
            +  L+   ++ Q++ G  + + +T  G  ++FGS    C+G  +    + L+PR +  F
Sbjct: 412 HVEKLQG-KAIHQVSCGDDFTVCITDEGQAFAFGSDYYGCIGVNKAFGSEVLEPRQLNVF 470

Query: 319 RRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAV 378
               +   +VS GD HV  L  +  VYTWG G  G LG   E D  LP+ +   K+   V
Sbjct: 471 LNNPVE--QVSCGDNHVAVLTRNREVYTWGCGEYGRLGLDSEEDHWLPQKVEIQKASNIV 528

Query: 379 QVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD--RGVSDKVLRPRI--------LDSLR 428
            V      TF+L  TG V   G   F  LG      G+ +      I           L 
Sbjct: 529 SVQCGSDGTFLLTQTGKVLACGLNEFNKLGLNQCTSGIINHDAYQEIPYTTCFTLAKKLS 588

Query: 429 AHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 463
            + +  I+ G  HT  + +RGRL  FG N+  QLG
Sbjct: 589 FYKIRTIAPGKTHTAAIDERGRLLTFGSNKCGQLG 623



 Score = 66.6 bits (161), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 46/166 (27%), Positives = 74/166 (44%), Gaps = 6/166 (3%)

Query: 320 RKGIHVVRVSAGDEHVVALDSSGYVYTW-----GKGYCGALGHGDEIDKTLPEPLSSLKS 374
           + G    +V AG+ H   +     +YTW     G    G LGHGD+     P+ +  L+ 
Sbjct: 359 KGGCSARQVCAGNTHFALVTVEKELYTWVNMQGGTKLHGQLGHGDKASYRQPKHVEKLQG 418

Query: 375 HLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQ 434
               QV      T  + D G  + FG   +G +G  ++    +VL PR L+    + V Q
Sbjct: 419 KAIHQVSCGDDFTVCITDEGQAFAFGSDYYGCIGV-NKAFGSEVLEPRQLNVFLNNPVEQ 477

Query: 435 ISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQE 480
           +S G  H  V+T    ++ +G  E  +LG D+      P ++ IQ+
Sbjct: 478 VSCGDNHVAVLTRNREVYTWGCGEYGRLGLDSEEDHWLPQKVEIQK 523



 Score = 65.5 bits (158), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 79/305 (25%), Positives = 125/305 (40%), Gaps = 36/305 (11%)

Query: 115 QITTGRYHTLLISNS-SVFSCGSSLCGVLG-HGPETTQCVSFTRINFPSAAHVVQVSASE 172
           Q++ G   T+ I++    F+ GS   G +G +    ++ +   ++N      V QVS  +
Sbjct: 423 QVSCGDDFTVCITDEGQAFAFGSDYYGCIGVNKAFGSEVLEPRQLNVFLNNPVEQVSCGD 482

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHR-----DTNRPIFRPRLVEALKGVPCKQVTAGLNF 227
           NH A + ++ +V+T G      CG       D+    + P+ VE  K      V  G + 
Sbjct: 483 NHVAVLTRNREVYTWG------CGEYGRLGLDSEEDHWLPQKVEIQKASNIVSVQCGSDG 536

Query: 228 TGFLTIRGHVHTCGSNTHGQLG----------HGDTLDRP--TPKSIAPLEEVGSVVQIA 275
           T  LT  G V  CG N   +LG          H    + P  T  ++A       +  IA
Sbjct: 537 TFLLTQTGKVLACGLNEFNKLGLNQCTSGIINHDAYQEIPYTTCFTLAKKLSFYKIRTIA 596

Query: 276 AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHV 335
            G ++  A+   G + +FGS     LG G     L    +      G  V+RVS GDE  
Sbjct: 597 PGKTHTAAIDERGRLLTFGSNKCGQLGVGNYKKRLGINLLGG-PLGGKQVIRVSCGDEFT 655

Query: 336 VALDSSGYVYTWGKGYCGAL-------GHGDEIDKTLPEPL-SSLKSHLAVQVCARKRKT 387
           +A     +++ WG G  G L        H  +I  + P P+  SL  H    +  R   T
Sbjct: 656 IAATDDNHIFAWGNGGNGRLAMTPTERAHSSDICTSWPRPIFGSL--HYVPDLSCRGWHT 713

Query: 388 FVLVD 392
            ++V+
Sbjct: 714 IIIVE 718


>gi|42563438|ref|NP_186900.3| regulator of chromosome condensation domain-containing protein
           [Arabidopsis thaliana]
 gi|110735845|dbj|BAE99899.1| hypothetical protein [Arabidopsis thaliana]
 gi|332640299|gb|AEE73820.1| regulator of chromosome condensation domain-containing protein
           [Arabidopsis thaliana]
          Length = 393

 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 105/370 (28%), Positives = 161/370 (43%), Gaps = 34/370 (9%)

Query: 125 LISNSSVFSCGSSLCGVLGHGP-ETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQ 183
           +++ +S+ + GS   G LG G  E  +         P +   V VS S N  A +   G 
Sbjct: 1   MVTATSIIAWGSGEDGQLGIGTNEEKEWACVVEALEPYSVRSV-VSGSRNSLA-ICDDGT 58

Query: 184 VFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 243
           +FT G N     GH+   +    P  V+AL  V   Q   G      +  +G  +  G N
Sbjct: 59  MFTWGWNQRGTLGHQPETKTENIPSRVKALANVKITQAAIGGWHCLAVDDQGRAYAWGGN 118

Query: 244 THGQLGH---GDTLDRPT------PKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 294
            +GQ G     D + RP       PK  AP     +V Q+AAG ++ + +T  G V+++G
Sbjct: 119 EYGQCGEEPLKDEMGRPVRRDIVIPKRCAPKL---TVRQVAAGGTHSVVLTREGHVWTWG 175

Query: 295 SGSNFCLGHGEQHDELQPRAIQTF----RRKGIHVVR-VSAGDEHVVALDSSGYVYTWGK 349
                            P  I+      R +G+  VR ++ G  H +AL+  G +  WG 
Sbjct: 176 Q-------------PWPPGDIKQISVPVRVQGLENVRLIAVGAFHNLALEEDGRLLAWGN 222

Query: 350 GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGF 409
              G LG GD    + P P+  L     V + A    +  L D G VYG+G    G LG 
Sbjct: 223 NEYGQLGTGDTQPTSHPVPVQGLDDLTLVDIAAGGWHSTALTDKGEVYGWGRGEHGRLGL 282

Query: 410 PDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG 469
            D   S K++ P+ ++ L    + Q+S G  H+V +T  GR+F FG  +  +LG+     
Sbjct: 283 GDNDKSSKMV-PQKVNLLAEEDIIQVSCGGTHSVALTRDGRIFSFGRGDHGRLGYGRKVT 341

Query: 470 CLEPTEIFIQ 479
             +P E+ I+
Sbjct: 342 TGQPLELPIK 351



 Score = 92.8 bits (229), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 82/303 (27%), Positives = 131/303 (43%), Gaps = 18/303 (5%)

Query: 116 ITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           + +G  ++L I  + ++F+ G +  G LGH PET      +R+   +   + Q +    H
Sbjct: 43  VVSGSRNSLAICDDGTMFTWGWNQRGTLGHQPETKTENIPSRVKALANVKITQAAIGGWH 102

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHR----DTNRPIFRPRLV--EALKGVPCKQVTAGLNFT 228
              V   G+ +  G N    CG      +  RP+ R  ++       +  +QV AG   +
Sbjct: 103 CLAVDDQGRAYAWGGNEYGQCGEEPLKDEMGRPVRRDIVIPKRCAPKLTVRQVAAGGTHS 162

Query: 229 GFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG 288
             LT  GHV T G         GD      P  +  LE   +V  IA G  + LA+  +G
Sbjct: 163 VVLTREGHVWTWGQ----PWPPGDIKQISVPVRVQGLE---NVRLIAVGAFHNLALEEDG 215

Query: 289 VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 348
            + ++G+     LG G+      P  +Q      + +V ++AG  H  AL   G VY WG
Sbjct: 216 RLLAWGNNEYGQLGTGDTQPTSHPVPVQGL--DDLTLVDIAAGGWHSTALTDKGEVYGWG 273

Query: 349 KGYCGALGHG--DEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGS 406
           +G  G LG G  D+  K +P+ ++ L     +QV      +  L   G ++ FG    G 
Sbjct: 274 RGEHGRLGLGDNDKSSKMVPQKVNLLAEEDIIQVSCGGTHSVALTRDGRIFSFGRGDHGR 333

Query: 407 LGF 409
           LG+
Sbjct: 334 LGY 336


>gi|55832768|gb|AAV66897.1| truncated HERC6 [Homo sapiens]
          Length = 322

 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 89/274 (32%), Positives = 130/274 (47%), Gaps = 8/274 (2%)

Query: 193 FCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGD 252
           FC G    +R + R R   +  G    Q  +G   +  L     V +CG N+ GQLG   
Sbjct: 3   FCWG--ADSRELQRRRTAGS-PGAELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRG 59

Query: 253 TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGE-QHDELQ 311
                 P+ I  LE +  V  ++ G  + LAV   G V+++G+GS   LG GE +     
Sbjct: 60  AQRGELPEPIQALETL-IVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFT 118

Query: 312 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEI-DKTLPEPLS 370
           P+ I T     I +++VS G  H +AL     V++WGK   G LG G E   +  P+ + 
Sbjct: 119 PKKIMTL--NDIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEFPSQASPQRVR 176

Query: 371 SLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAH 430
           SL+     QV A    +F L   G+ +G+G    G L    R V  +  +P  + +L+  
Sbjct: 177 SLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSVGALKNL 236

Query: 431 HVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 464
            V  IS G  HT V+T  G++F FGDN   QLG+
Sbjct: 237 GVVYISCGDAHTAVLTQDGKVFTFGDNRSGQLGY 270



 Score = 94.7 bits (234), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 82/284 (28%), Positives = 138/284 (48%), Gaps = 19/284 (6%)

Query: 163 AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 222
           A ++Q ++ E H+  +L + +V +CGDNS    G R   R    P  ++AL+ +    V+
Sbjct: 23  AELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGEL-PEPIQALETLIVDLVS 81

Query: 223 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRP-TPKSIAPLEEVGSVVQIAAGPSYM 281
            G   +  +  +G V   G+ + GQLG G+  +   TPK I  L ++  ++Q++ G  + 
Sbjct: 82  CGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKIMTLNDI-KIIQVSCGHYHS 140

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQH-DELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 340
           LA++ +  V+S+G  S+  LG G++   +  P+ +++   +GI + +V+AG  H  AL  
Sbjct: 141 LALSKDSQVFSWGKNSHGQLGLGKEFPSQASPQRVRSL--EGIPLAQVAAGGAHSFALSL 198

Query: 341 SGYVYTWGKGYCGAL---GHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVY 397
            G  + WG    G L   G    +    P  + +LK+   V +      T VL   G V+
Sbjct: 199 CGTSFGWGSNSAGQLALSGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGKVF 258

Query: 398 GFGWMGFGSLGF---PDRGVSDKVLRPRILDSLRAHHVSQISTG 438
            FG    G LG+   P++     V R   +D L    VSQI  G
Sbjct: 259 TFGDNRSGQLGYSPTPEKRGPQLVER---IDGL----VSQIDCG 295



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 76/282 (26%), Positives = 126/282 (44%), Gaps = 19/282 (6%)

Query: 114 MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHV 165
           +Q  +G  H+LL+ +N  V SCG +  G LG         PE  Q +    ++       
Sbjct: 26  LQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGELPEPIQALETLIVDL------ 79

Query: 166 VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 225
             VS  + H+  V   G+VF  G  S    G  +     F P+ +  L  +   QV+ G 
Sbjct: 80  --VSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKIMTLNDIKIIQVSCGH 137

Query: 226 NFTGFLTIRGHVHTCGSNTHGQLGHGDTL-DRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 284
             +  L+    V + G N+HGQLG G     + +P+ +  LE +  + Q+AAG ++  A+
Sbjct: 138 YHSLALSKDSQVFSWGKNSHGQLGLGKEFPSQASPQRVRSLEGI-PLAQVAAGGAHSFAL 196

Query: 285 TGNGVVYSFGSGSNFCLGHGEQHDELQP-RAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 343
           +  G  + +GS S   L    ++  +Q  + +     K + VV +S GD H   L   G 
Sbjct: 197 SLCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGK 256

Query: 344 VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKR 385
           V+T+G    G LG+    +K  P+ +  +   ++   C R R
Sbjct: 257 VFTFGDNRSGQLGYSPTPEKRGPQLVERIDGLVSQIDCGRLR 298


>gi|444915391|ref|ZP_21235524.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
 gi|444713468|gb|ELW54366.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
          Length = 743

 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 110/360 (30%), Positives = 169/360 (46%), Gaps = 25/360 (6%)

Query: 107 VETSAGNMQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHV 165
           V+   G + +  G  H+L   S+ SV++ GS+  G LG G   T   S + +     + V
Sbjct: 392 VQGLGGGVAVAAGFNHSLAARSDGSVWAWGSNDSGQLGDG---TTRNSTSPVQVQGLSGV 448

Query: 166 VQVSASENHAAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V V+A  +H+  +   G V+  G N+    G    TNR +     V+ L GV    V AG
Sbjct: 449 VAVAAGFDHSLALRSDGSVWAWGSNAYGQLGEGTTTNRLV----PVQVLSGVVA--VAAG 502

Query: 225 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 284
            N +  +   G V T GSN +GQLG G T +R  P  +  L     V  +AAG  + LAV
Sbjct: 503 SNHSLAVRSDGTVWTWGSNLYGQLGDGTTSNRLVPVQVQGLS---GVAAVAAGSFHSLAV 559

Query: 285 TGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
             +G V+++GS S+  LG G   + L P  +          V V+AG  H + + S G V
Sbjct: 560 HSDGSVWAWGSNSSGELGDGTTSNRLVPGRVPGLSGG----VAVAAGGFHSLVVRSDGTV 615

Query: 345 YTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGF 404
           +TWG    G LG G    +++P  +  L   +AV   A    +  +   G+V+ +G+  +
Sbjct: 616 WTWGSNSFGELGDGTTTSRSVPVQVQGLSGVVAVD--AGNSHSLAVRSDGTVWTWGYNSY 673

Query: 405 GSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 464
           G LG    G + +   P  +  L    V  ++TG  H +VV   G ++ +G N   QLG+
Sbjct: 674 GQLG---DGTTTRRSVPVQVPGLSG--VVAMATGALHPLVVRSDGTVWAWGYNSFGQLGN 728



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 108/359 (30%), Positives = 162/359 (45%), Gaps = 23/359 (6%)

Query: 119 GRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAF 177
           G YH+L L S+ SV++ G +  G LG    T++ V    +     +  + V+A  +H+  
Sbjct: 304 GSYHSLALRSDGSVWAWGHNSSGQLGDDSSTSRSVP---VQVRGLSGGMAVTAGSSHSLA 360

Query: 178 VLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHV 237
           V   G V+  G N S   G   TN     P  V+ L G     V AG N +      G V
Sbjct: 361 VGSDGTVWAWGSNFSGERGEGTTNNRA-SPVQVQGLGG--GVAVAAGFNHSLAARSDGSV 417

Query: 238 HTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 297
              GSN  GQLG G T +  +P  +  L     VV +AAG  + LA+  +G V+++GS +
Sbjct: 418 WAWGSNDSGQLGDGTTRNSTSPVQVQGLS---GVVAVAAGFDHSLALRSDGSVWAWGSNA 474

Query: 298 NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 357
              LG G   + L P  +Q        VV V+AG  H +A+ S G V+TWG    G LG 
Sbjct: 475 YGQLGEGTTTNRLVP--VQVLS----GVVAVAAGSNHSLAVRSDGTVWTWGSNLYGQLGD 528

Query: 358 GDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDK 417
           G   ++ +P  +  L    A  V A    +  +   GSV+ +G    G LG    G +  
Sbjct: 529 GTTSNRLVPVQVQGLSGVAA--VAAGSFHSLAVHSDGSVWAWGSNSSGELG---DGTTSN 583

Query: 418 VLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 476
            L P  +  L       ++ G +H++VV   G ++ +G N   +LG  T      P ++
Sbjct: 584 RLVPGRVPGLSGGVA--VAAGGFHSLVVRSDGTVWTWGSNSFGELGDGTTTSRSVPVQV 640



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 114/372 (30%), Positives = 167/372 (44%), Gaps = 39/372 (10%)

Query: 114 MQITTGRYHTLLISNSSVFSCGSSLCGVL---GHGPETTQCVSFTRINFP--SAAHVVQV 168
           MQ   GR+ + L+             GVL   G G  T +    T    P   A    ++
Sbjct: 1   MQGNAGRWMSRLLG---------VWIGVLMGVGCGLPTDESAEQTSRGAPLRDAPSRARL 51

Query: 169 SASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFT 228
           +A  +++  +   G V+  G N     G   T      P  V  L GV    V AG + +
Sbjct: 52  AAGSSYSLALRPDGTVWATGSNDLGQLGDGTTTNH-SAPVQVPGLSGVVA--VAAGSSHS 108

Query: 229 GFLTIR--GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTG 286
             L +R  G V   GSN+ GQLG G T  R TP  +  L     VV +AAG SY LAV  
Sbjct: 109 --LAVRHDGTVWAWGSNSDGQLGDGTTTMRLTPVRVQGLS---GVVSVAAGSSYSLAVRS 163

Query: 287 NGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYT 346
           +G V+++GS  +  LG G   + L P  +Q     G  VV V+AG  H +A+ S G V+ 
Sbjct: 164 DGTVWAWGSNFSGQLGDGTTSNRLVP--VQVPGLSG--VVSVAAGSSHSLAVLSDGSVWA 219

Query: 347 WGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGS 406
           WG    G LG G +I++ +P  +  L     V V A    +  +   G+V+ +G   FG 
Sbjct: 220 WGANSSGQLGDGTKINRLVPVQVPGLSG--VVAVAAGAAHSLAVRSDGTVWTWGANSFGQ 277

Query: 407 LGFPDRGVSDKVLRPRI--LDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 464
           LG  D   SD+++  R+  L  + A  V     G YH++ +   G ++ +G N   QLG 
Sbjct: 278 LG--DGTKSDRLVPVRVQGLSGVVASDV-----GSYHSLALRSDGSVWAWGHNSSGQLGD 330

Query: 465 DTLRGCLEPTEI 476
           D+      P ++
Sbjct: 331 DSSTSRSVPVQV 342



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 103/377 (27%), Positives = 164/377 (43%), Gaps = 31/377 (8%)

Query: 107 VETSAGNMQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHV 165
           V+  +G + +  G  ++L + S+ +V++ GS+  G LG G  + + V    +  P  + V
Sbjct: 142 VQGLSGVVSVAAGSSYSLAVRSDGTVWAWGSNFSGQLGDGTTSNRLVP---VQVPGLSGV 198

Query: 166 VQVSASENHAAFVLQSGQVFTCGDNSSFCCGH-RDTNR--PIFRPRLVEALKGVPCKQVT 222
           V V+A  +H+  VL  G V+  G NSS   G     NR  P+  P L   +        +
Sbjct: 199 VSVAAGSSHSLAVLSDGSVWAWGANSSGQLGDGTKINRLVPVQVPGLSGVVAVAAGAAHS 258

Query: 223 AGLNFTGFLTIR--GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 280
                   L +R  G V T G+N+ GQLG G   DR  P  +  L     VV    G  +
Sbjct: 259 --------LAVRSDGTVWTWGANSFGQLGDGTKSDRLVPVRVQGLS---GVVASDVGSYH 307

Query: 281 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 340
            LA+  +G V+++G  S+  LG     D    R++    R     + V+AG  H +A+ S
Sbjct: 308 SLALRSDGSVWAWGHNSSGQLG----DDSSTSRSVPVQVRGLSGGMAVTAGSSHSLAVGS 363

Query: 341 SGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 400
            G V+ WG  + G  G G   ++  P  +  L   +A  V A    +      GSV+ +G
Sbjct: 364 DGTVWAWGSNFSGERGEGTTNNRASPVQVQGLGGGVA--VAAGFNHSLAARSDGSVWAWG 421

Query: 401 WMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERA 460
               G LG    G +     P  +  L    V  ++ G  H++ +   G ++ +G N   
Sbjct: 422 SNDSGQLG---DGTTRNSTSPVQVQGLSG--VVAVAAGFDHSLALRSDGSVWAWGSNAYG 476

Query: 461 QLGHDTLRGCLEPTEIF 477
           QLG  T    L P ++ 
Sbjct: 477 QLGEGTTTNRLVPVQVL 493



 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 85/263 (32%), Positives = 123/263 (46%), Gaps = 22/263 (8%)

Query: 107 VETSAGNMQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHV 165
           V+  +G + +  G  H+L + S+ +V++ GS+L G LG G  + + V    +     + V
Sbjct: 490 VQVLSGVVAVAAGSNHSLAVRSDGTVWTWGSNLYGQLGDGTTSNRLVP---VQVQGLSGV 546

Query: 166 VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 225
             V+A   H+  V   G V+  G NSS   G   T+  +  P  V  L G     V AG 
Sbjct: 547 AAVAAGSFHSLAVHSDGSVWAWGSNSSGELGDGTTSNRLV-PGRVPGLSG--GVAVAAG- 602

Query: 226 NFTGF--LTIR--GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 281
              GF  L +R  G V T GSN+ G+LG G T  R  P  +  L     VV + AG S+ 
Sbjct: 603 ---GFHSLVVRSDGTVWTWGSNSFGELGDGTTTSRSVPVQVQGLS---GVVAVDAGNSHS 656

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 341
           LAV  +G V+++G  S   LG G       P  +Q     G  VV ++ G  H + + S 
Sbjct: 657 LAVRSDGTVWTWGYNSYGQLGDGTTTRRSVP--VQVPGLSG--VVAMATGALHPLVVRSD 712

Query: 342 GYVYTWGKGYCGALGHGDEIDKT 364
           G V+ WG    G LG+G  +  T
Sbjct: 713 GTVWAWGYNSFGQLGNGSPLFAT 735


>gi|426344974|ref|XP_004039178.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 [Gorilla
           gorilla gorilla]
          Length = 982

 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 84/252 (33%), Positives = 122/252 (48%), Gaps = 5/252 (1%)

Query: 215 GVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQI 274
           G    Q  +G   +  L     V +CG N+ GQLG         P+ I  LE +  V  +
Sbjct: 22  GAELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGELPEPIQALETL-IVDLV 80

Query: 275 AAGPSYMLAVTGNGVVYSFGSGSNFCLGHGE-QHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           + G  + LAV   G V+++G+GS   LG GE +     P+ I T    GI +++VS G  
Sbjct: 81  SCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKITTLN--GIKIIQVSCGHY 138

Query: 334 HVVALDSSGYVYTWGKGYCGALGHGDEI-DKTLPEPLSSLKSHLAVQVCARKRKTFVLVD 392
           H +AL     V++WGK   G LG G E   +  P+ + SL+     QV A    +F L  
Sbjct: 139 HSLALSKDSQVFSWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGTHSFALSL 198

Query: 393 TGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLF 452
            G+ +G+G    G L    R V  +  +P  + +L+   V  IS G  HT V+T  G++F
Sbjct: 199 CGTSFGWGSNSAGQLALSGRNVPAQSNKPLSIGALKNLGVVYISCGDEHTAVLTQDGKVF 258

Query: 453 GFGDNERAQLGH 464
            FGDN   QLG+
Sbjct: 259 TFGDNCSGQLGY 270



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 91/302 (30%), Positives = 149/302 (49%), Gaps = 20/302 (6%)

Query: 163 AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 222
           A ++Q ++ E H+  +L + +V +CGDNS    G R   R    P  ++AL+ +    V+
Sbjct: 23  AELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGEL-PEPIQALETLIVDLVS 81

Query: 223 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRP-TPKSIAPLEEVGSVVQIAAGPSYM 281
            G   +  +  +G V   G+ + GQLG G+  +   TPK I  L  +  ++Q++ G  + 
Sbjct: 82  CGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKITTLNGI-KIIQVSCGHYHS 140

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQH-DELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 340
           LA++ +  V+S+G  S+  LG G++   +  P+ +++   +GI + +V+AG  H  AL  
Sbjct: 141 LALSKDSQVFSWGKNSHGQLGLGKEFPSQASPQRVRSL--EGIPLAQVAAGGTHSFALSL 198

Query: 341 SGYVYTWGKGYCGALG-HGDEIDKTLPEPLS--SLKSHLAVQVCARKRKTFVLVDTGSVY 397
            G  + WG    G L   G  +     +PLS  +LK+   V +      T VL   G V+
Sbjct: 199 CGTSFGWGSNSAGQLALSGRNVPAQSNKPLSIGALKNLGVVYISCGDEHTAVLTQDGKVF 258

Query: 398 GFGWMGFGSLGF---PDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV-VTDRGRLFG 453
            FG    G LG+   P++     V R   +D L    VSQI  G YHT+  V   G++  
Sbjct: 259 TFGDNCSGQLGYSPTPEKRGPQLVER---IDGL----VSQIDCGSYHTLAYVHTTGQVVS 311

Query: 454 FG 455
           FG
Sbjct: 312 FG 313



 Score = 92.4 bits (228), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 83/299 (27%), Positives = 131/299 (43%), Gaps = 23/299 (7%)

Query: 114 MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHV 165
           +Q  +G  H+LL+ +N  V SCG +  G LG         PE  Q +    ++       
Sbjct: 26  LQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGELPEPIQALETLIVDL------ 79

Query: 166 VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 225
             VS  + H+  V   G+VF  G  S    G  +     F P+ +  L G+   QV+ G 
Sbjct: 80  --VSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKITTLNGIKIIQVSCGH 137

Query: 226 NFTGFLTIRGHVHTCGSNTHGQLGHGDTL-DRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 284
             +  L+    V + G N+HGQLG G     + +P+ +  LE +  + Q+AAG ++  A+
Sbjct: 138 YHSLALSKDSQVFSWGKNSHGQLGLGKEFPSQASPQRVRSLEGI-PLAQVAAGGTHSFAL 196

Query: 285 TGNGVVYSFGSGSNFCL---GHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 341
           +  G  + +GS S   L   G        +P +I   +  G  VV +S GDEH   L   
Sbjct: 197 SLCGTSFGWGSNSAGQLALSGRNVPAQSNKPLSIGALKNLG--VVYISCGDEHTAVLTQD 254

Query: 342 GYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 400
           G V+T+G    G LG+    +K  P+ +  +   ++   C        +  TG V  FG
Sbjct: 255 GKVFTFGDNCSGQLGYSPTPEKRGPQLVERIDGLVSQIDCGSYHTLAYVHTTGQVVSFG 313


>gi|403366107|gb|EJY82845.1| RCC1 repeat domain protein [Oxytricha trifallax]
          Length = 2141

 Score =  114 bits (285), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 76/277 (27%), Positives = 139/277 (50%), Gaps = 9/277 (3%)

Query: 205 FRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP 264
           F+P +V+    +   +V+ G +FT  L+  GHV++ G    G LG G+     TP +I  
Sbjct: 241 FKPSIVKFDASIIIIKVSCGNSFTLALSQEGHVYSWGLGNSGGLGQGEQNVSMTP-NIIK 299

Query: 265 LEEVGSVVQ----IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRR 320
            ++ G + Q    IA G +++L++   G+VYS+G+G    LGHG++  E  P+ I   R+
Sbjct: 300 YQKNGHLFQNIKDIACGSNHVLSLDHQGIVYSWGNGQGGRLGHGDETGENIPKEIIGLRQ 359

Query: 321 KGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQV 380
             I  + + AG+    A+     ++ WG G  G LG G   +   P  L  LK      +
Sbjct: 360 YKI--LMIEAGEGSSAAISIKNELFIWGVGLHGRLGTGKTANVLKPVMLEDLKDQKVEDI 417

Query: 381 CARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLY 440
                 +  ++  G    +G    G LG  +  +     +P+ L +L    + QI+ G +
Sbjct: 418 ALGSNHSLCILRNGKAMCWGSSKDGKLGL-ETALDRNFTQPKELVTLDKEKLYQIAAGPF 476

Query: 441 HTVVVTDRGRLFGFGDNERAQLGHDTLRGCLE-PTEI 476
           H++ +T+ G ++ FG+++  +LG+D ++G ++ P +I
Sbjct: 477 HSIALTENGEIYSFGNSKDGKLGYDEIKGNVQIPRKI 513



 Score =  107 bits (268), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 66/233 (28%), Positives = 124/233 (53%), Gaps = 11/233 (4%)

Query: 257 PTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQ 316
           P   SI   +    +++++ G S+ LA++  G VYS+G G++  LG GEQ+  + P  I+
Sbjct: 240 PFKPSIVKFDASIIIIKVSCGNSFTLALSQEGHVYSWGLGNSGGLGQGEQNVSMTPNIIK 299

Query: 317 TFRRKGIHVVR----VSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSL 372
            +++ G H+ +    ++ G  HV++LD  G VY+WG G  G LGHGDE  + +P+ +  L
Sbjct: 300 -YQKNG-HLFQNIKDIACGSNHVLSLDHQGIVYSWGNGQGGRLGHGDETGENIPKEIIGL 357

Query: 373 KSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHV 432
           + +  + + A +  +  +     ++ +G    G LG    G +  VL+P +L+ L+   V
Sbjct: 358 RQYKILMIEAGEGSSAAISIKNELFIWGVGLHGRLG---TGKTANVLKPVMLEDLKDQKV 414

Query: 433 SQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTL--RGCLEPTEIFIQEMEE 483
             I+ G  H++ +   G+   +G ++  +LG +T   R   +P E+   + E+
Sbjct: 415 EDIALGSNHSLCILRNGKAMCWGSSKDGKLGLETALDRNFTQPKELVTLDKEK 467



 Score = 74.7 bits (182), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 72/265 (27%), Positives = 121/265 (45%), Gaps = 19/265 (7%)

Query: 114 MQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTR--INFPSAAHVVQ--- 167
           ++++ G   TL +S    V+S G    G LG G    Q VS T   I +    H+ Q   
Sbjct: 255 IKVSCGNSFTLALSQEGHVYSWGLGNSGGLGQG---EQNVSMTPNIIKYQKNGHLFQNIK 311

Query: 168 -VSASENHAAFVLQSGQVFTCGDNSSFCCGHRD-TNRPIFRPRLVEALKGVPCKQVTAGL 225
            ++   NH   +   G V++ G+      GH D T   I  P+ +  L+      + AG 
Sbjct: 312 DIACGSNHVLSLDHQGIVYSWGNGQGGRLGHGDETGENI--PKEIIGLRQYKILMIEAGE 369

Query: 226 NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 285
             +  ++I+  +   G   HG+LG G T +   P  +  L++   V  IA G ++ L + 
Sbjct: 370 GSSAAISIKNELFIWGVGLHGRLGTGKTANVLKPVMLEDLKD-QKVEDIALGSNHSLCIL 428

Query: 286 GNGVVYSFGSGSNFCLGHGEQHDE--LQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 343
            NG    +GS  +  LG     D    QP+ + T  ++ ++  +++AG  H +AL  +G 
Sbjct: 429 RNGKAMCWGSSKDGKLGLETALDRNFTQPKELVTLDKEKLY--QIAAGPFHSIALTENGE 486

Query: 344 VYTWGKGYCGALGHGDEIDKTLPEP 368
           +Y++G    G LG+ DEI   +  P
Sbjct: 487 IYSFGNSKDGKLGY-DEIKGNVQIP 510



 Score = 72.8 bits (177), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 75/278 (26%), Positives = 114/278 (41%), Gaps = 40/278 (14%)

Query: 116 ITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           I  G  H L + +   V+S G+   G LGHG ET + +    I       ++ + A E  
Sbjct: 313 IACGSNHVLSLDHQGIVYSWGNGQGGRLGHGDETGENIPKEIIGL-RQYKILMIEAGEGS 371

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 234
           +A +    ++F  G       G   T   + +P ++E LK    + +  G N +  +   
Sbjct: 372 SAAISIKNELFIWGVGLHGRLGTGKTAN-VLKPVMLEDLKDQKVEDIALGSNHSLCILRN 430

Query: 235 GHVHTCGSNTHGQLGHGDTLDR--PTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
           G     GS+  G+LG    LDR    PK +  L++   + QIAAGP + +A+T NG +YS
Sbjct: 431 GKAMCWGSSKDGKLGLETALDRNFTQPKELVTLDK-EKLYQIAAGPFHSIALTENGEIYS 489

Query: 293 FGSGSNFCLGHGEQHDELQ-PRAIQT---FRRK--------------------------- 321
           FG+  +  LG+ E    +Q PR I     F RK                           
Sbjct: 490 FGNSKDGKLGYDEIKGNVQIPRKITNCPIFARKTGLNDRRDKYQLFNQFDDQMTVISNNQ 549

Query: 322 ---GIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 356
              G  V++   G    V L + G +Y  G    G LG
Sbjct: 550 QLGGCEVIQAQCGFNSTVFLLNDGQMYVCGSNKYGQLG 587



 Score = 66.2 bits (160), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 68/276 (24%), Positives = 117/276 (42%), Gaps = 48/276 (17%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCG--DNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 222
           +  VS    H   V   G  F  G  DN     G +DT   + +P  +++L+        
Sbjct: 677 IKHVSTGYFHVLAVTHEGATFGWGRNDNGQLGMGRKDT--VVSKPTRIKSLQDKVIIMTA 734

Query: 223 AGLNFTGFLTIRGHVHTCGSNTHGQLGHG--------DTLDRP----------------- 257
           +G + + FL+  G V   G N  G+LG G        D  + P                 
Sbjct: 735 SGESHSLFLSDLGEVLCSGFNEFGELGIGLNSTSGGADKKENPDEIYDENYQRQLIETKI 794

Query: 258 --TPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG------VVYSFGSGSNFCLGHGEQHDE 309
             TPK I  LE +G    IAAG ++ +A+           ++++G G +   GHG   ++
Sbjct: 795 ELTPKIIKGLESIGF---IAAGKNHSIAIRTYKRKEKAMKLFTWGCGWHGQTGHGSWQND 851

Query: 310 LQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPL 369
             P+ ++    K    ++ S G +H +ALD++G++  W  GY  ++G  D  D+    P 
Sbjct: 852 YLPQIVKVPVLKDTKFIQASCGSKHTIALDTTGHI--WFFGYKPSVGIEDFNDEKQFMP- 908

Query: 370 SSLKSHLAVQ-----VCARKRKTFVLVDTGSVYGFG 400
           + L++   +Q     + + +     +  +G VYGFG
Sbjct: 909 ARLETPSKIQEPFKFISSGEEHNLAVTQSGLVYGFG 944



 Score = 64.7 bits (156), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 70/282 (24%), Positives = 116/282 (41%), Gaps = 46/282 (16%)

Query: 219 KQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHG--DTLDRPTPKSIAPLEEVGSVVQIAA 276
           K V+ G      +T  G     G N +GQLG G  DT+    P  I  L++   ++  A+
Sbjct: 678 KHVSTGYFHVLAVTHEGATFGWGRNDNGQLGMGRKDTV-VSKPTRIKSLQD-KVIIMTAS 735

Query: 277 GPSYMLAVTGNGVVY--------SFGSGSNFCLGHGEQHD-------------------E 309
           G S+ L ++  G V           G G N   G  ++ +                   E
Sbjct: 736 GESHSLFLSDLGEVLCSGFNEFGELGIGLNSTSGGADKKENPDEIYDENYQRQLIETKIE 795

Query: 310 LQPRAIQTFRRKGIHVVRVSAGDEHVVAL------DSSGYVYTWGKGYCGALGHGDEIDK 363
           L P+ I+     G     ++AG  H +A+      + +  ++TWG G+ G  GHG   + 
Sbjct: 796 LTPKIIKGLESIGF----IAAGKNHSIAIRTYKRKEKAMKLFTWGCGWHGQTGHGSWQND 851

Query: 364 TLPE--PLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRP 421
            LP+   +  LK    +Q     + T  L  TG ++ FG+    S+G  D     + +  
Sbjct: 852 YLPQIVKVPVLKDTKFIQASCGSKHTIALDTTGHIWFFGYKP--SVGIEDFNDEKQFMPA 909

Query: 422 RILDSLRAHHVSQ-ISTGLYHTVVVTDRGRLFGFGDNERAQL 462
           R+    +     + IS+G  H + VT  G ++GFG N   ++
Sbjct: 910 RLETPSKIQEPFKFISSGEEHNLAVTQSGLVYGFGKNTNTKI 951



 Score = 41.2 bits (95), Expect = 1.2,   Method: Composition-based stats.
 Identities = 53/203 (26%), Positives = 85/203 (41%), Gaps = 28/203 (13%)

Query: 168  VSASENHAAFVL------QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEA--LKGVPCK 219
            ++A +NH+  +       ++ ++FT G       GH       + P++V+   LK     
Sbjct: 810  IAAGKNHSIAIRTYKRKEKAMKLFTWGCGWHGQTGHGSWQND-YLPQIVKVPVLKDTKFI 868

Query: 220  QVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE-EVGSVVQ----- 273
            Q + G   T  L   GH+   G      +G  D  D    K   P   E  S +Q     
Sbjct: 869  QASCGSKHTIALDTTGHIWFFGYKP--SVGIEDFNDE---KQFMPARLETPSKIQEPFKF 923

Query: 274  IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
            I++G  + LAVT +G+VY FG  +N  + +    + L    ++   +     V  + G  
Sbjct: 924  ISSGEEHNLAVTQSGLVYGFGKNTNTKI-NSSHKEYLYFDQVENEEK----AVLTACGAN 978

Query: 334  HVVALDSSGYVYTW---GKGYCG 353
            H V +D+ G  YTW   G G CG
Sbjct: 979  HSVLIDTKGVPYTWGFVGNGRCG 1001


>gi|196012955|ref|XP_002116339.1| hypothetical protein TRIADDRAFT_64264 [Trichoplax adhaerens]
 gi|190580930|gb|EDV21009.1| hypothetical protein TRIADDRAFT_64264 [Trichoplax adhaerens]
          Length = 514

 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 84/293 (28%), Positives = 142/293 (48%), Gaps = 14/293 (4%)

Query: 178 VLQSGQVFTCGDNSSFCCGH---RDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 234
           V ++G +F CG     C G     D N P   P+L+  +  V    +  G      LT  
Sbjct: 172 VSRNGGIFACGKGHMGCLGLGNCDDVNVPRQIPQLLPVM--VTTVAIHPGGRHAMALTAE 229

Query: 235 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 294
           G V++ G    GQLGHG+TL    P  I  L+    V +IA G  + +AV  +G ++S+G
Sbjct: 230 GKVYSWGCGDRGQLGHGNTLGYLDPTLIDELKS-KEVTKIACGAMHSIAVLSDGKIFSWG 288

Query: 295 SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGA 354
            GSN  LGHG    +L P+ I +    G H++ V+ G+ + +A+ +   V++WG G  G 
Sbjct: 289 DGSNGALGHGNNLAQLLPKKIMSLN--GKHIMAVACGECYTIAV-AGDDVWSWGLGGNGE 345

Query: 355 LGHGDEIDK-TLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRG 413
           LG+G E+    +P  + +L       V      +F +   G V+ +G      LG  +  
Sbjct: 346 LGYGVEMPSYYMPTKIEALFFKGITNVACGYATSFAVSANGKVWAWGSGDRFRLGLGNEK 405

Query: 414 VSDKVLRPR-ILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHD 465
           V   +++PR I   L+   + ++   L+H + + + G+++ +G  E   +G+D
Sbjct: 406 V---IVKPREIQGDLKGKKIKRVVASLFHALAIDENGQVYIWGSQEIGPVGND 455



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 82/314 (26%), Positives = 143/314 (45%), Gaps = 12/314 (3%)

Query: 166 VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 225
           V+ S ++ +    ++  +V+  G   +      + N     P   + L+ +    +  G 
Sbjct: 109 VEKSRTDPYKEMRVEPSEVYVWGSKRNLLLAADEKNP--LEPDKSKLLENLDPSDIACGY 166

Query: 226 NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG-SVVQIAAGPSYMLAV 284
           +    ++  G +  CG    G LG G+  D   P+ I  L  V  + V I  G  + +A+
Sbjct: 167 DSLFVVSRNGGIFACGKGHMGCLGLGNCDDVNVPRQIPQLLPVMVTTVAIHPGGRHAMAL 226

Query: 285 TGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           T  G VYS+G G    LGHG     L P  I   + K   V +++ G  H +A+ S G +
Sbjct: 227 TAEGKVYSWGCGDRGQLGHGNTLGYLDPTLIDELKSK--EVTKIACGAMHSIAVLSDGKI 284

Query: 345 YTWGKGYCGALGHGDEIDKTLPEPLSSLK-SHLAVQVCARKRKTFVLVDTGSVYGFGWMG 403
           ++WG G  GALGHG+ + + LP+ + SL   H+    C       V  D   V+ +G  G
Sbjct: 285 FSWGDGSNGALGHGNNLAQLLPKKIMSLNGKHIMAVACGECYTIAVAGD--DVWSWGLGG 342

Query: 404 FGSLGFPDRGVS-DKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQL 462
            G LG+   GV       P  +++L    ++ ++ G   +  V+  G+++ +G  +R +L
Sbjct: 343 NGELGY---GVEMPSYYMPTKIEALFFKGITNVACGYATSFAVSANGKVWAWGSGDRFRL 399

Query: 463 GHDTLRGCLEPTEI 476
           G    +  ++P EI
Sbjct: 400 GLGNEKVIVKPREI 413



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 77/246 (31%), Positives = 123/246 (50%), Gaps = 12/246 (4%)

Query: 119 GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
           GR+   L +   V+S G    G LGHG  T   +  T I+   +  V +++    H+  V
Sbjct: 220 GRHAMALTAEGKVYSWGCGDRGQLGHG-NTLGYLDPTLIDELKSKEVTKIACGAMHSIAV 278

Query: 179 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH-V 237
           L  G++F+ GD S+   GH + N     P+ + +L G     V  G  +T  + + G  V
Sbjct: 279 LSDGKIFSWGDGSNGALGHGN-NLAQLLPKKIMSLNGKHIMAVACGECYT--IAVAGDDV 335

Query: 238 HTCGSNTHGQLGHGDTLDRPT---PKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 294
            + G   +G+LG+G  ++ P+   P  I  L   G +  +A G +   AV+ NG V+++G
Sbjct: 336 WSWGLGGNGELGYG--VEMPSYYMPTKIEALFFKG-ITNVACGYATSFAVSANGKVWAWG 392

Query: 295 SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGA 354
           SG  F LG G +   ++PR IQ    KG  + RV A   H +A+D +G VY WG    G 
Sbjct: 393 SGDRFRLGLGNEKVIVKPREIQG-DLKGKKIKRVVASLFHALAIDENGQVYIWGSQEIGP 451

Query: 355 LGHGDE 360
           +G+ ++
Sbjct: 452 VGNDED 457



 Score = 48.1 bits (113), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 49/182 (26%), Positives = 77/182 (42%), Gaps = 9/182 (4%)

Query: 311 QP--RAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEP 368
           QP  R  +   ++GI V + S  D +         VY WG      L   DE +   P+ 
Sbjct: 93  QPSIRLKEELLKRGIDVEK-SRTDPYKEMRVEPSEVYVWGSKR-NLLLAADEKNPLEPDK 150

Query: 369 LSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLR 428
              L++     +       FV+   G ++  G    G LG    G  D V  PR +  L 
Sbjct: 151 SKLLENLDPSDIACGYDSLFVVSRNGGIFACGKGHMGCLGL---GNCDDVNVPRQIPQLL 207

Query: 429 AHHVSQIST--GLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQEMEEDTG 486
              V+ ++   G  H + +T  G+++ +G  +R QLGH    G L+PT I   + +E T 
Sbjct: 208 PVMVTTVAIHPGGRHAMALTAEGKVYSWGCGDRGQLGHGNTLGYLDPTLIDELKSKEVTK 267

Query: 487 LA 488
           +A
Sbjct: 268 IA 269



 Score = 47.8 bits (112), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 49/200 (24%), Positives = 87/200 (43%), Gaps = 7/200 (3%)

Query: 115 QITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
           +I  G  H++ ++S+  +FS G    G LGHG    Q +   +I   +  H++ V+  E 
Sbjct: 267 KIACGAMHSIAVLSDGKIFSWGDGSNGALGHGNNLAQLLP-KKIMSLNGKHIMAVACGEC 325

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEAL--KGVPCKQVTAGLNFTGFL 231
           +    +    V++ G   +   G+       + P  +EAL  KG+    V  G   +  +
Sbjct: 326 YT-IAVAGDDVWSWGLGGNGELGYGVEMPSYYMPTKIEALFFKGI--TNVACGYATSFAV 382

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
           +  G V   GS    +LG G+      P+ I    +   + ++ A   + LA+  NG VY
Sbjct: 383 SANGKVWAWGSGDRFRLGLGNEKVIVKPREIQGDLKGKKIKRVVASLFHALAIDENGQVY 442

Query: 292 SFGSGSNFCLGHGEQHDELQ 311
            +GS     +G+ E   + Q
Sbjct: 443 IWGSQEIGPVGNDEDAKQQQ 462



 Score = 43.1 bits (100), Expect = 0.35,   Method: Compositional matrix adjust.
 Identities = 36/140 (25%), Positives = 60/140 (42%), Gaps = 2/140 (1%)

Query: 114 MQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
           M +  G  +T+ ++   V+S G    G LG+G E       T+I       +  V+    
Sbjct: 318 MAVACGECYTIAVAGDDVWSWGLGGNGELGYGVEMPSYYMPTKIEALFFKGITNVACGYA 377

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEA-LKGVPCKQVTAGLNFTGFLT 232
            +  V  +G+V+  G    F  G     + I +PR ++  LKG   K+V A L     + 
Sbjct: 378 TSFAVSANGKVWAWGSGDRFRLG-LGNEKVIVKPREIQGDLKGKKIKRVVASLFHALAID 436

Query: 233 IRGHVHTCGSNTHGQLGHGD 252
             G V+  GS   G +G+ +
Sbjct: 437 ENGQVYIWGSQEIGPVGNDE 456


>gi|7406983|gb|AAF61856.1|AF189221_1 HERC2 [Drosophila melanogaster]
          Length = 743

 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 75/242 (30%), Positives = 120/242 (49%), Gaps = 6/242 (2%)

Query: 206 RPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL 265
           RP+LVE L G+    +  G   +  +T  GHV T G   +G+LGHGD+ D+  PK +  L
Sbjct: 9   RPKLVEHLNGMSVADIACGSAHSAAITASGHVLTWGKGRYGRLGHGDSEDQLRPKLVEAL 68

Query: 266 EEVGSV-VQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH 324
               ++ +   +G +  L +T +  V+S+G G    LG G       P  I++    G+ 
Sbjct: 69  LGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKLPYKIESL--AGLG 126

Query: 325 VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARK 384
           VV+V  G +  VAL  SG VYTWGKG    LGHG       P+ +++L+    + +    
Sbjct: 127 VVKVECGSQFSVALTKSGAVYTWGKGDFHRLGHGSVDHVRRPKKVAALQGKKIISIATGS 186

Query: 385 RKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV 444
                  D+G VY +G    G LG    G    +  PR++ +L+  H+ +++ G  HT+ 
Sbjct: 187 LHCVACSDSGEVYTWGDNDEGQLG---DGTVTAIQWPRLVTALQGKHIVKVTCGSAHTLA 243

Query: 445 VT 446
           ++
Sbjct: 244 LS 245



 Score =  105 bits (261), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 68/224 (30%), Positives = 109/224 (48%), Gaps = 4/224 (1%)

Query: 250 HGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDE 309
           HG+ +    PK +  L  + SV  IA G ++  A+T +G V ++G G    LGHG+  D+
Sbjct: 1   HGNRMSYDRPKLVEHLNGM-SVADIACGSAHSAAITASGHVLTWGKGRYGRLGHGDSEDQ 59

Query: 310 LQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPL 369
           L+P+ ++         +   +GD   + +     V++WG G  G LG G      LP  +
Sbjct: 60  LRPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKLPYKI 119

Query: 370 SSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRA 429
            SL     V+V    + +  L  +G+VY +G   F  LG    G  D V RP+ + +L+ 
Sbjct: 120 ESLAGLGVVKVECGSQFSVALTKSGAVYTWGKGDFHRLG---HGSVDHVRRPKKVAALQG 176

Query: 430 HHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEP 473
             +  I+TG  H V  +D G ++ +GDN+  QLG  T+     P
Sbjct: 177 KKIISIATGSLHCVACSDSGEVYTWGDNDEGQLGDGTVTAIQWP 220



 Score = 92.0 bits (227), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 69/228 (30%), Positives = 104/228 (45%), Gaps = 6/228 (2%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V  ++    H+A +  SG V T G       GH D+   + RP+LVEAL G     +  G
Sbjct: 21  VADIACGSAHSAAITASGHVLTWGKGRYGRLGHGDSEDQL-RPKLVEALLGYRAIDIACG 79

Query: 225 LNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 282
                 L I    +V + G   +G+LG G +     P  I  L  +G VV++  G  + +
Sbjct: 80  SGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKLPYKIESLAGLG-VVKVECGSQFSV 138

Query: 283 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
           A+T +G VY++G G    LGHG      +P+ +     +G  ++ ++ G  H VA   SG
Sbjct: 139 ALTKSGAVYTWGKGDFHRLGHGSVDHVRRPKKVAAL--QGKKIISIATGSLHCVACSDSG 196

Query: 343 YVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVL 390
            VYTWG    G LG G       P  +++L+    V+V      T  L
Sbjct: 197 EVYTWGDNDEGQLGDGTVTAIQWPRLVTALQGKHIVKVTCGSAHTLAL 244



 Score = 42.0 bits (97), Expect = 0.70,   Method: Compositional matrix adjust.
 Identities = 29/122 (23%), Positives = 56/122 (45%), Gaps = 5/122 (4%)

Query: 357 HGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSD 416
           HG+ +    P+ +  L       +      +  +  +G V  +G   +G LG  D   S+
Sbjct: 1   HGNRMSYDRPKLVEHLNGMSVADIACGSAHSAAITASGHVLTWGKGRYGRLGHGD---SE 57

Query: 417 KVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPT 474
             LRP+++++L  +    I+  +G   T+ +TD   ++ +GD +  +LG     GC  P 
Sbjct: 58  DQLRPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKLPY 117

Query: 475 EI 476
           +I
Sbjct: 118 KI 119


>gi|387018578|gb|AFJ51407.1| Serine/threonine-protein kinase Nek9-like [Crotalus adamanteus]
          Length = 963

 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 83/275 (30%), Positives = 125/275 (45%), Gaps = 21/275 (7%)

Query: 207 PRLVEALK-GVPCKQVTAGLNFTGFLTIRGHVHTC-----GSNTHGQLGHGDTLDRPTPK 260
           P+ ++ +K G   +QV AG      +T+   ++T      G+  HGQLGHGD      PK
Sbjct: 348 PQKLDVIKNGCSARQVCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDKASYRQPK 407

Query: 261 SIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ--HDELQPRAIQTF 318
            +  L+   ++ Q++ G  + + +T  G  ++FGS    C+G  +    + L+PR I  F
Sbjct: 408 HVEKLQG-KAIRQVSCGDDFTICITDEGQAFAFGSDYYGCIGIDKAFGSEVLEPRQINFF 466

Query: 319 RRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAV 378
               +   +VS GD HV  L  +  VYTWG G  G LG   E D ++P+ +   K+   V
Sbjct: 467 SSNPVE--QVSCGDNHVAVLTRNREVYTWGCGEYGRLGLDSEEDHSIPQKVEIQKTSNIV 524

Query: 379 QVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD--RGVSDKVLRPRI--------LDSLR 428
            V      TF+L   G V   G   F  LG      G+ +      I           L 
Sbjct: 525 SVQCGSDGTFLLTQAGKVLACGLNEFNKLGLNQCTSGIINHDAYQEIPYATTFTLAKKLS 584

Query: 429 AHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 463
            + +  I+ G  HT  + +RGRL  FG N+  QLG
Sbjct: 585 FYKIRTIAPGKTHTAAIDERGRLLTFGSNKCGQLG 619



 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 76/281 (27%), Positives = 117/281 (41%), Gaps = 33/281 (11%)

Query: 115 QITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPET-TQCVSFTRINFPSAAHVVQVSASE 172
           Q++ G   T+ I++    F+ GS   G +G      ++ +   +INF S+  V QVS  +
Sbjct: 419 QVSCGDDFTICITDEGQAFAFGSDYYGCIGIDKAFGSEVLEPRQINFFSSNPVEQVSCGD 478

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHR-----DTNRPIFRPRLVEALKGVPCKQVTAGLNF 227
           NH A + ++ +V+T G      CG       D+      P+ VE  K      V  G + 
Sbjct: 479 NHVAVLTRNREVYTWG------CGEYGRLGLDSEEDHSIPQKVEIQKTSNIVSVQCGSDG 532

Query: 228 TGFLTIRGHVHTCGSNTHGQLG----------HGDTLDRP--TPKSIAPLEEVGSVVQIA 275
           T  LT  G V  CG N   +LG          H    + P  T  ++A       +  IA
Sbjct: 533 TFLLTQAGKVLACGLNEFNKLGLNQCTSGIINHDAYQEIPYATTFTLAKKLSFYKIRTIA 592

Query: 276 AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHV 335
            G ++  A+   G + +FGS     LG G+    L    +      G  V+RVS GDE  
Sbjct: 593 PGKTHTAAIDERGRLLTFGSNKCGQLGVGDYKKHLGINLLGG-PLGGKQVIRVSCGDEFT 651

Query: 336 VALDSSGYVYTWGKGYCGAL-------GHGDEIDKTLPEPL 369
           +A     +++ WG G  G L        H  +I  + P P+
Sbjct: 652 IAATDDNHIFAWGNGGNGRLAMTPTERAHSSDICTSWPRPI 692



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 46/166 (27%), Positives = 75/166 (45%), Gaps = 6/166 (3%)

Query: 320 RKGIHVVRVSAGDEHVVALDSSGYVYTW-----GKGYCGALGHGDEIDKTLPEPLSSLKS 374
           + G    +V AG+ H   +     +YTW     G    G LGHGD+     P+ +  L+ 
Sbjct: 355 KNGCSARQVCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDKASYRQPKHVEKLQG 414

Query: 375 HLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQ 434
               QV      T  + D G  + FG   +G +G  D+    +VL PR ++   ++ V Q
Sbjct: 415 KAIRQVSCGDDFTICITDEGQAFAFGSDYYGCIGI-DKAFGSEVLEPRQINFFSSNPVEQ 473

Query: 435 ISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQE 480
           +S G  H  V+T    ++ +G  E  +LG D+      P ++ IQ+
Sbjct: 474 VSCGDNHVAVLTRNREVYTWGCGEYGRLGLDSEEDHSIPQKVEIQK 519


>gi|297832882|ref|XP_002884323.1| regulator of chromosome condensation family protein [Arabidopsis
           lyrata subsp. lyrata]
 gi|297330163|gb|EFH60582.1| regulator of chromosome condensation family protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 393

 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 105/364 (28%), Positives = 157/364 (43%), Gaps = 24/364 (6%)

Query: 125 LISNSSVFSCGSSLCGVLGHGP-ETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQ 183
           ++S +S+ + GS   G LG G  E  +         P +   V VS S N  A +   G 
Sbjct: 1   MVSATSIIAWGSGEDGQLGIGTNEEKEWACVVEALEPYSVRSV-VSGSRNSLA-ICDDGT 58

Query: 184 VFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 243
           +FT G N     GH    +    P  V+AL  V   Q   G      +  +G  +  G N
Sbjct: 59  MFTWGWNQRGTLGHPPETKTENIPSRVKALANVKITQAAIGGWHCLAVDDQGRAYAWGGN 118

Query: 244 THGQLGH---GDTLDRPT------PKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 294
            +GQ G     D + RP       PK  AP     +V Q+AAG ++ + +T  G V+++G
Sbjct: 119 EYGQCGEEPLKDEMGRPVRRDIVIPKRCAPKL---TVRQVAAGGTHSVVLTREGHVWTWG 175

Query: 295 SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGA 354
                    G+      P  +Q      I    ++ G  H +AL+  G +  WG    G 
Sbjct: 176 Q----PWPPGDIKQIFVPVRVQGLENVSI----IAVGAFHNLALEEDGRLLAWGNNEYGQ 227

Query: 355 LGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGV 414
           LG GD    + P P+  L     V + A    +  L D G VYG+G    G LGF D   
Sbjct: 228 LGTGDTQPTSHPVPVHGLDDLTLVDIAAGGWHSTALTDKGEVYGWGRGEHGRLGFGDNDK 287

Query: 415 SDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPT 474
           S K++ P+ ++ L    + Q+S G  H+V +T  GR+F FG  +  +LG+       +P 
Sbjct: 288 SSKMV-PQKVNLLAEEDIIQVSCGGTHSVALTRDGRIFSFGRGDHGRLGYGRKVTTGQPL 346

Query: 475 EIFI 478
           E+ I
Sbjct: 347 ELPI 350



 Score = 89.7 bits (221), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 81/303 (26%), Positives = 130/303 (42%), Gaps = 18/303 (5%)

Query: 116 ITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           + +G  ++L I  + ++F+ G +  G LGH PET      +R+   +   + Q +    H
Sbjct: 43  VVSGSRNSLAICDDGTMFTWGWNQRGTLGHPPETKTENIPSRVKALANVKITQAAIGGWH 102

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHR----DTNRPIFRPRLVEA--LKGVPCKQVTAGLNFT 228
              V   G+ +  G N    CG      +  RP+ R  ++       +  +QV AG   +
Sbjct: 103 CLAVDDQGRAYAWGGNEYGQCGEEPLKDEMGRPVRRDIVIPKRCAPKLTVRQVAAGGTHS 162

Query: 229 GFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG 288
             LT  GHV T G         GD      P  +  LE   +V  IA G  + LA+  +G
Sbjct: 163 VVLTREGHVWTWGQ----PWPPGDIKQIFVPVRVQGLE---NVSIIAVGAFHNLALEEDG 215

Query: 289 VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 348
            + ++G+     LG G+      P  +       + +V ++AG  H  AL   G VY WG
Sbjct: 216 RLLAWGNNEYGQLGTGDTQPTSHPVPVHGL--DDLTLVDIAAGGWHSTALTDKGEVYGWG 273

Query: 349 KGYCGALGHG--DEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGS 406
           +G  G LG G  D+  K +P+ ++ L     +QV      +  L   G ++ FG    G 
Sbjct: 274 RGEHGRLGFGDNDKSSKMVPQKVNLLAEEDIIQVSCGGTHSVALTRDGRIFSFGRGDHGR 333

Query: 407 LGF 409
           LG+
Sbjct: 334 LGY 336


>gi|255571261|ref|XP_002526580.1| Ran GTPase binding protein, putative [Ricinus communis]
 gi|223534074|gb|EEF35792.1| Ran GTPase binding protein, putative [Ricinus communis]
          Length = 1086

 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 90/304 (29%), Positives = 142/304 (46%), Gaps = 21/304 (6%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V  +S    HAA + + G+VF  GD S    GH+  N  +  P++VE+L  V  K V  G
Sbjct: 312 VRSISLGRKHAALITKRGEVFCWGDGSRGKLGHK-VNMDVGMPKVVESLDDVHIKSVVCG 370

Query: 225 LNFTGFLTIRGHVHTCGSNTHGQ--LGHGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYM 281
              T  LT  G ++T G N +G        T  +  P K   PL+ + ++ ++A G  + 
Sbjct: 371 EYQTCALTHSGELYTWGDNKNGANLTDEMRTRSQWLPYKLFGPLDGI-TISKVACGEWHT 429

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS- 340
             V+ +G ++++G G+   LGHG       P+ + + R  G+ V  V+ G  H  A+   
Sbjct: 430 AIVSLSGQLFTYGDGTFGVLGHGSLQSVSHPKEVASLR--GLSVKSVACGSWHTAAIVDI 487

Query: 341 ----------SGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVL 390
                      G ++TWG G  G LGH D   K +P  ++ L  +  ++V   +  T  L
Sbjct: 488 IADRFKFNAVGGKLFTWGDGDKGRLGHSDMEKKLVPTCVAKLVDYDFIRVSCGRMLTVAL 547

Query: 391 VDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGR 450
            +TG VY  G    G LG P     DK +   +   L+   V +IS+G YH  V+T  G 
Sbjct: 548 TNTGKVYTMGSSVHGQLGNPQ--AKDKSITI-VEGKLKEEFVKEISSGSYHVAVLTSGGN 604

Query: 451 LFGF 454
           ++ +
Sbjct: 605 VYTW 608



 Score = 89.4 bits (220), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 97/364 (26%), Positives = 150/364 (41%), Gaps = 37/364 (10%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRI-NFPSAAHVVQVSASEN 173
           I+ GR H  LI+    VF  G    G LGH  +    V   ++       H+  V   E 
Sbjct: 315 ISLGRKHAALITKRGEVFCWGDGSRGKLGH--KVNMDVGMPKVVESLDDVHIKSVVCGEY 372

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTN----RPIFRP-RLVEALKGVPCKQVTAGLNFT 228
               +  SG+++T GDN +   G   T+    R  + P +L   L G+   +V  G   T
Sbjct: 373 QTCALTHSGELYTWGDNKN---GANLTDEMRTRSQWLPYKLFGPLDGITISKVACGEWHT 429

Query: 229 GFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTG-- 286
             +++ G + T G  T G LGHG       PK +A L  + SV  +A G  +  A+    
Sbjct: 430 AIVSLSGQLFTYGDGTFGVLGHGSLQSVSHPKEVASLRGL-SVKSVACGSWHTAAIVDII 488

Query: 287 ---------NGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
                     G ++++G G    LGH +   +L P  +          +RVS G    VA
Sbjct: 489 ADRFKFNAVGGKLFTWGDGDKGRLGHSDMEKKLVPTCVAKL--VDYDFIRVSCGRMLTVA 546

Query: 338 LDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVY 397
           L ++G VYT G    G LG+    DK++      LK     ++ +      VL   G+VY
Sbjct: 547 LTNTGKVYTMGSSVHGQLGNPQAKDKSITIVEGKLKEEFVKEISSGSYHVAVLTSGGNVY 606

Query: 398 GFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTG--------LYHTVVVTDRG 449
              W   G+       + D+   P  +++LR   V  I+ G        L+ ++ VTD+ 
Sbjct: 607 --TWGKGGNGQLGLGNIEDRN-SPTYVEALRDREVESIACGSNLTAAICLHKSISVTDQS 663

Query: 450 RLFG 453
              G
Sbjct: 664 SCSG 667



 Score = 88.6 bits (218), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 72/275 (26%), Positives = 125/275 (45%), Gaps = 26/275 (9%)

Query: 207 PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 266
           P+L+E+   +  + ++ G      +T RG V   G  + G+LGH   +D   PK +  L+
Sbjct: 301 PKLLESTAMLDVRSISLGRKHAALITKRGEVFCWGDGSRGKLGHKVNMDVGMPKVVESLD 360

Query: 267 EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRK----- 321
           +V  +  +  G     A+T +G +Y++G   N         DE++ R+ Q    K     
Sbjct: 361 DV-HIKSVVCGEYQTCALTHSGELYTWGDNKN----GANLTDEMRTRS-QWLPYKLFGPL 414

Query: 322 -GIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQV 380
            GI + +V+ G+ H   +  SG ++T+G G  G LGHG     + P+ ++SL+      V
Sbjct: 415 DGITISKVACGEWHTAIVSLSGQLFTYGDGTFGVLGHGSLQSVSHPKEVASLRGLSVKSV 474

Query: 381 CARKRKTFVLVDT-----------GSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRA 429
                 T  +VD            G ++ +G    G LG  D    +K L P  +  L  
Sbjct: 475 ACGSWHTAAIVDIIADRFKFNAVGGKLFTWGDGDKGRLGHSDM---EKKLVPTCVAKLVD 531

Query: 430 HHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 464
           +   ++S G   TV +T+ G+++  G +   QLG+
Sbjct: 532 YDFIRVSCGRMLTVALTNTGKVYTMGSSVHGQLGN 566



 Score = 71.6 bits (174), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 48/172 (27%), Positives = 84/172 (48%), Gaps = 4/172 (2%)

Query: 306 QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTL 365
           Q D L P+ +++     + V  +S G +H   +   G V+ WG G  G LGH   +D  +
Sbjct: 295 QVDALVPKLLESTAM--LDVRSISLGRKHAALITKRGEVFCWGDGSRGKLGHKVNMDVGM 352

Query: 366 PEPLSSLKS-HLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRIL 424
           P+ + SL   H+   VC  + +T  L  +G +Y +G    G+    +     + L  ++ 
Sbjct: 353 PKVVESLDDVHIKSVVCG-EYQTCALTHSGELYTWGDNKNGANLTDEMRTRSQWLPYKLF 411

Query: 425 DSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 476
             L    +S+++ G +HT +V+  G+LF +GD     LGH +L+    P E+
Sbjct: 412 GPLDGITISKVACGEWHTAIVSLSGQLFTYGDGTFGVLGHGSLQSVSHPKEV 463



 Score = 62.0 bits (149), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 65/225 (28%), Positives = 102/225 (45%), Gaps = 17/225 (7%)

Query: 115 QITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSASE 172
           ++  G +HT ++S S  +F+ G    GVLGHG  + Q VS  + +       V  V+   
Sbjct: 421 KVACGEWHTAIVSLSGQLFTYGDGTFGVLGHG--SLQSVSHPKEVASLRGLSVKSVACGS 478

Query: 173 NHAAFVLQ-----------SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQV 221
            H A ++             G++FT GD      GH D  + +  P  V  L      +V
Sbjct: 479 WHTAAIVDIIADRFKFNAVGGKLFTWGDGDKGRLGHSDMEKKLV-PTCVAKLVDYDFIRV 537

Query: 222 TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 281
           + G   T  LT  G V+T GS+ HGQLG+    D+        L+E   V +I++G  ++
Sbjct: 538 SCGRMLTVALTNTGKVYTMGSSVHGQLGNPQAKDKSITIVEGKLKE-EFVKEISSGSYHV 596

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVV 326
             +T  G VY++G G N  LG G   D   P  ++  R + +  +
Sbjct: 597 AVLTSGGNVYTWGKGGNGQLGLGNIEDRNSPTYVEALRDREVESI 641


>gi|327261081|ref|XP_003215360.1| PREDICTED: RCC1 and BTB domain-containing protein 2-like [Anolis
           carolinensis]
          Length = 526

 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 84/265 (31%), Positives = 133/265 (50%), Gaps = 10/265 (3%)

Query: 203 PIFRPRLVEALKGV--PCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPK 260
           PIF  R  E LK +   C   +AG N   ++T    V   G+N  G LG GDT +   P+
Sbjct: 8   PIFAFRSPEELKLIRQACVFGSAG-NEVLYVTENNEVFALGTNCSGCLGVGDTQNSVEPR 66

Query: 261 SIAPL-EEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFR 319
            +  L  +  + +   +GP  ++A T  G VY++G  +   LG+G  ++ L P  I T  
Sbjct: 67  RLDTLCGKKITCLSYGSGPHVVVA-TAEGEVYTWGHNAYSQLGNGTTNNSLLPCQIST-N 124

Query: 320 RKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSS-LKSHLAV 378
                V  V+ G  H + L S G VYTWG    G +G G   ++ +P  ++S L++ +AV
Sbjct: 125 LVNKKVTEVACGSHHSMILTSDGEVYTWGYNNSGQVGSGSTANQAIPRRVTSCLQNKIAV 184

Query: 379 QVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTG 438
            +   +  +  +V+ G VY +G+ G G LG  + G      R   L  +R   V +++ G
Sbjct: 185 NIACGQMCSMAVVENGEVYVWGYNGNGQLGLGNSGNQPTPCRIAALQGIR---VQRVACG 241

Query: 439 LYHTVVVTDRGRLFGFGDNERAQLG 463
             HT+V+TD G+++ +G N   QLG
Sbjct: 242 YAHTLVLTDEGQMYAWGANSYGQLG 266



 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 80/288 (27%), Positives = 126/288 (43%), Gaps = 5/288 (1%)

Query: 125 LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS-ASENHAAFVLQSGQ 183
           +  N+ VF+ G++  G LG G +T   V   R++      +  +S  S  H       G+
Sbjct: 37  VTENNEVFALGTNCSGCLGVG-DTQNSVEPRRLDTLCGKKITCLSYGSGPHVVVATAEGE 95

Query: 184 VFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 243
           V+T G N+    G+  TN  +   ++   L      +V  G + +  LT  G V+T G N
Sbjct: 96  VYTWGHNAYSQLGNGTTNNSLLPCQISTNLVNKKVTEVACGSHHSMILTSDGEVYTWGYN 155

Query: 244 THGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH 303
             GQ+G G T ++  P+ +    +    V IA G    +AV  NG VY +G   N  LG 
Sbjct: 156 NSGQVGSGSTANQAIPRRVTSCLQNKIAVNIACGQMCSMAVVENGEVYVWGYNGNGQLGL 215

Query: 304 GEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK 363
           G   ++  P  I     +GI V RV+ G  H + L   G +Y WG    G LG G+  ++
Sbjct: 216 GNSGNQPTPCRIAAL--QGIRVQRVACGYAHTLVLTDEGQMYAWGANSYGQLGTGNRSNQ 273

Query: 364 TLPEPLSSLKSH-LAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFP 410
           + P P++  K   + +  C     +        VY +G     S+  P
Sbjct: 274 SYPVPITVDKDRVIEIAACHSAHTSAAKTQGSQVYMWGQCRGQSITLP 321



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 76/274 (27%), Positives = 128/274 (46%), Gaps = 12/274 (4%)

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEAL--KGVPCKQVTAGLNFTGF 230
           N   +V ++ +VF  G N S C G  DT   +  PR ++ L  K + C    +G +    
Sbjct: 32  NEVLYVTENNEVFALGTNCSGCLGVGDTQNSV-EPRRLDTLCGKKITCLSYGSGPHVV-V 89

Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 290
            T  G V+T G N + QLG+G T +   P  I+       V ++A G  + + +T +G V
Sbjct: 90  ATAEGEVYTWGHNAYSQLGNGTTNNSLLPCQISTNLVNKKVTEVACGSHHSMILTSDGEV 149

Query: 291 YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKG 350
           Y++G  ++  +G G   ++  PR + +  +  I  V ++ G    +A+  +G VY WG  
Sbjct: 150 YTWGYNNSGQVGSGSTANQAIPRRVTSCLQNKI-AVNIACGQMCSMAVVENGEVYVWGYN 208

Query: 351 YCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFP 410
             G LG G+  ++  P  +++L+     +V      T VL D G +Y +G   +G LG  
Sbjct: 209 GNGQLGLGNSGNQPTPCRIAALQGIRVQRVACGYAHTLVLTDEGQMYAWGANSYGQLGTG 268

Query: 411 DRG-----VSDKVLRPRILDSLRAH--HVSQIST 437
           +R      V   V + R+++    H  H S   T
Sbjct: 269 NRSNQSYPVPITVDKDRVIEIAACHSAHTSAAKT 302



 Score = 41.2 bits (95), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 27/93 (29%), Positives = 43/93 (46%), Gaps = 4/93 (4%)

Query: 385 RKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGL-YHTV 443
            +   + +   V+  G    G LG  D   +   + PR LD+L    ++ +S G   H V
Sbjct: 32  NEVLYVTENNEVFALGTNCSGCLGVGD---TQNSVEPRRLDTLCGKKITCLSYGSGPHVV 88

Query: 444 VVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 476
           V T  G ++ +G N  +QLG+ T    L P +I
Sbjct: 89  VATAEGEVYTWGHNAYSQLGNGTTNNSLLPCQI 121


>gi|156740286|ref|YP_001430415.1| regulator of chromosome condensation RCC1 [Roseiflexus castenholzii
           DSM 13941]
 gi|156231614|gb|ABU56397.1| regulator of chromosome condensation RCC1 [Roseiflexus castenholzii
           DSM 13941]
          Length = 792

 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 114/359 (31%), Positives = 155/359 (43%), Gaps = 17/359 (4%)

Query: 110 SAGNMQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQV 168
           ++G   I  G  HT  L+S+  V   G +  G LG G  T +           A+ V  +
Sbjct: 117 TSGVTAIAAGYAHTCALMSSGGVMCWGDNWSGQLGDGTTTDRSTPVAVSGL--ASGVTAI 174

Query: 169 SASENHAAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVPCKQVTAGLNF 227
           +A ++H      SG V   GDN S   G    T+R    P  V  L G     + AG + 
Sbjct: 175 AAGDDHTCARTSSGGVMCWGDNWSGQLGDGTTTDRST--PVAVSGL-GSGVTAIAAGGSH 231

Query: 228 TGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN 287
           T  L   G V   G N  GQLG G T DR TP +++ L     V  IAAG  +  A T +
Sbjct: 232 TCALMSSGGVWCWGDNWSGQLGDGTTTDRSTPVAVSGLAS--GVTAIAAGGFHTCARTSS 289

Query: 288 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 347
           G V  +G+  +  LG G       P A+         V  ++AGD H  AL SSG V+ W
Sbjct: 290 GGVMCWGANWSGQLGDGTTTARSTPVAVSGLASG---VTAIAAGDSHTCALTSSGGVWCW 346

Query: 348 GKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSL 407
           G  + G LG G   D++ P  +S L S +   + A    T  L+ +G V  +G    G L
Sbjct: 347 GYNFFGQLGDGTTTDRSTPVAVSGLGSGV-TAIAAGDFHTCALMSSGGVRCWGRNKDGQL 405

Query: 408 GFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDT 466
           G    G +     P  +  L    V+ I+ G  HT   T  G +  +GDN   QLG  T
Sbjct: 406 G---DGTTTTRSTPVAVSGL-VSGVTAIAAGDDHTCARTSSGGVMCWGDNWSGQLGDGT 460



 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 115/397 (28%), Positives = 165/397 (41%), Gaps = 29/397 (7%)

Query: 89  NWKRVLRFLQSVEHSSDIVETSAGN--MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHG 145
           NW   L    + + S+ +  +  G+    I  G  HT  L+S+  V+  G +  G LG G
Sbjct: 196 NWSGQLGDGTTTDRSTPVAVSGLGSGVTAIAAGGSHTCALMSSGGVWCWGDNWSGQLGDG 255

Query: 146 PETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDT---NR 202
             T +           A+ V  ++A   H      SG V   G N S   G   T   + 
Sbjct: 256 TTTDRSTPVAVSGL--ASGVTAIAAGGFHTCARTSSGGVMCWGANWSGQLGDGTTTARST 313

Query: 203 PIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSI 262
           P+    L   +       + AG + T  LT  G V   G N  GQLG G T DR TP ++
Sbjct: 314 PVAVSGLASGVT-----AIAAGDSHTCALTSSGGVWCWGYNFFGQLGDGTTTDRSTPVAV 368

Query: 263 APLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKG 322
           + L     V  IAAG  +  A+  +G V  +G   +  LG G       P A+       
Sbjct: 369 SGLGS--GVTAIAAGDFHTCALMSSGGVRCWGRNKDGQLGDGTTTTRSTPVAVSGLVSG- 425

Query: 323 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCA 382
             V  ++AGD+H  A  SSG V  WG  + G LG G   D++ P  +S L S +   + A
Sbjct: 426 --VTAIAAGDDHTCARTSSGGVMCWGDNWSGQLGDGTTTDRSTPVAVSGLGSGV-TAIAA 482

Query: 383 RKRKTFVLVDTGSVYGFGWMGFGSLG---FPDRGVSDKVLRPRILDSLRAHHVSQISTGL 439
               T  L+ +G V+ +G    G LG     DRG       P  +  L +  V+ I++G 
Sbjct: 483 GGSHTCALMSSGGVWCWGRNSSGQLGDGTTTDRGT------PVAVSGLPS-EVTAIASGG 535

Query: 440 YHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 476
            HT  +T  G +  +G N   QLG  T      P  +
Sbjct: 536 VHTCALTSSGGVMCWGANWSGQLGDGTTTARSTPVAV 572



 Score =  108 bits (271), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 112/364 (30%), Positives = 160/364 (43%), Gaps = 27/364 (7%)

Query: 111 AGNMQITTGRYHTLLISNSSVFSC-GSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS 169
           +G   I  G  HT   ++S    C G +  G LG G  T +          S   V  ++
Sbjct: 424 SGVTAIAAGDDHTCARTSSGGVMCWGDNWSGQLGDGTTTDRSTPVAVSGLGSG--VTAIA 481

Query: 170 ASENHAAFVLQSGQVFTCGDNSSFCCGH---RDTNRPIFRPRLVEALKGVPCKQVTA--- 223
           A  +H   ++ SG V+  G NSS   G     D   P+       A+ G+P  +VTA   
Sbjct: 482 AGGSHTCALMSSGGVWCWGRNSSGQLGDGTTTDRGTPV-------AVSGLP-SEVTAIAS 533

Query: 224 GLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
           G   T  LT  G V   G+N  GQLG G T  R TP +++ L     V+ IAAG  +  A
Sbjct: 534 GGVHTCALTSSGGVMCWGANWSGQLGDGTTTARSTPVAVSGLPS--GVMAIAAGDLHTCA 591

Query: 284 VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 343
           +T +G V+ +G+ S+  LG G       P A+         V  ++AG  H  AL SSG 
Sbjct: 592 LTSSGGVWCWGANSSGQLGDGTTTARSTPVAVSGLPSG---VTAIAAGSFHTCALTSSGG 648

Query: 344 VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 403
           V+ WG  + G LG G   D + P  +S L S +   + A +  T     +G V+ +    
Sbjct: 649 VWCWGANWSGQLGDGSYTDSSTPVAVSGLPSGV-TAIAAGRFHTCARTGSGGVWCWASNR 707

Query: 404 FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 463
           +G LG  D   +D    P  +  L    V+ I+ G+ HT   T  G +  +G N   QLG
Sbjct: 708 YGQLG--DGSYTDSS-TPVAVSGL-VSGVTAIAAGVVHTCARTSSGGVMCWGANSSGQLG 763

Query: 464 HDTL 467
              L
Sbjct: 764 DGRL 767



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 87/264 (32%), Positives = 121/264 (45%), Gaps = 12/264 (4%)

Query: 213 LKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV 272
           L+GV    + AG   T  LT  G V   G N  GQLG G T DR TP +++ L     V 
Sbjct: 66  LQGV--TAIAAGGAHTCALTSSGGVMCWGRNGFGQLGDGTTTDRSTPVAVSGLTS--GVT 121

Query: 273 QIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGD 332
            IAAG ++  A+  +G V  +G   +  LG G   D   P A+         V  ++AGD
Sbjct: 122 AIAAGYAHTCALMSSGGVMCWGDNWSGQLGDGTTTDRSTPVAVSGLASG---VTAIAAGD 178

Query: 333 EHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVD 392
           +H  A  SSG V  WG  + G LG G   D++ P  +S L S +   + A    T  L+ 
Sbjct: 179 DHTCARTSSGGVMCWGDNWSGQLGDGTTTDRSTPVAVSGLGSGV-TAIAAGGSHTCALMS 237

Query: 393 TGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLF 452
           +G V+ +G    G LG  D   +D+   P  +  L A  V+ I+ G +HT   T  G + 
Sbjct: 238 SGGVWCWGDNWSGQLG--DGTTTDRS-TPVAVSGL-ASGVTAIAAGGFHTCARTSSGGVM 293

Query: 453 GFGDNERAQLGHDTLRGCLEPTEI 476
            +G N   QLG  T      P  +
Sbjct: 294 CWGANWSGQLGDGTTTARSTPVAV 317


>gi|432863737|ref|XP_004070157.1| PREDICTED: E3 ISG15--protein ligase HERC5-like [Oryzias latipes]
          Length = 892

 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 69/195 (35%), Positives = 107/195 (54%), Gaps = 6/195 (3%)

Query: 271 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQ-PRAIQTFRRKGIHVVRVS 329
           V Q+A G  + +A+T  G VY++G  S   LG G++   +  P+ +++    G+ +V+VS
Sbjct: 119 VSQVACGSRHTVALTKEGQVYTWGQNSRGQLGLGKKGCSISSPQCVRSL--SGMPLVQVS 176

Query: 330 AGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFV 389
           AG +H  AL  SG V+ WG+  CG LG GD  D+  P  + SL       +   K  T +
Sbjct: 177 AGGDHSFALSVSGSVFGWGRNDCGQLGLGDSQDRCTPTSVDSLNLKKTTSISCGKDHTAI 236

Query: 390 LVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRG 449
           L   G+V+ FG   FG LG      S   LRPR++  L    V++I+ G YHT+V+ +  
Sbjct: 237 LTKHGTVFTFGSGQFGQLG---HNSSRNELRPRLVAELWGAKVTRIACGRYHTLVLQENN 293

Query: 450 RLFGFGDNERAQLGH 464
           +++ FG N++ QLG 
Sbjct: 294 KIYSFGCNDQNQLGR 308



 Score =  105 bits (262), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 67/205 (32%), Positives = 103/205 (50%), Gaps = 3/205 (1%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V QV+    H   + + GQV+T G NS    G       I  P+ V +L G+P  QV+AG
Sbjct: 119 VSQVACGSRHTVALTKEGQVYTWGQNSRGQLGLGKKGCSISSPQCVRSLSGMPLVQVSAG 178

Query: 225 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 284
            + +  L++ G V   G N  GQLG GD+ DR TP S+  L  +     I+ G  +   +
Sbjct: 179 GDHSFALSVSGSVFGWGRNDCGQLGLGDSQDRCTPTSVDSL-NLKKTTSISCGKDHTAIL 237

Query: 285 TGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           T +G V++FGSG    LGH    +EL+PR +      G  V R++ G  H + L  +  +
Sbjct: 238 TKHGTVFTFGSGQFGQLGHNSSRNELRPRLVAELW--GAKVTRIACGRYHTLVLQENNKI 295

Query: 345 YTWGKGYCGALGHGDEIDKTLPEPL 369
           Y++G      LG  ++   ++P P+
Sbjct: 296 YSFGCNDQNQLGRSNDSHPSVPLPV 320



 Score = 96.3 bits (238), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 76/268 (28%), Positives = 121/268 (45%), Gaps = 28/268 (10%)

Query: 152 VSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFT----------CGDNSSFCCGHR--- 198
           ++F + N    A V++ S  EN A   ++  Q F           CGD+       +   
Sbjct: 41  LAFAKTN--GNAFVMRTSDGENGAR--MRGKQKFVKCKEKIEAVGCGDDEVILLSEKGSV 96

Query: 199 ---DTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDT-L 254
              D  + ++ PR++EA   +P  QV  G   T  LT  G V+T G N+ GQLG G    
Sbjct: 97  YRVDVTQALYLPRMLEAFCRIPVSQVACGSRHTVALTKEGQVYTWGQNSRGQLGLGKKGC 156

Query: 255 DRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC--LGHGEQHDELQP 312
              +P+ +  L  +  +VQ++AG  +  A++ +G V  FG G N C  LG G+  D   P
Sbjct: 157 SISSPQCVRSLSGM-PLVQVSAGGDHSFALSVSGSV--FGWGRNDCGQLGLGDSQDRCTP 213

Query: 313 RAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSL 372
            ++ +   K      +S G +H   L   G V+T+G G  G LGH    ++  P  ++ L
Sbjct: 214 TSVDSLNLK--KTTSISCGKDHTAILTKHGTVFTFGSGQFGQLGHNSSRNELRPRLVAEL 271

Query: 373 KSHLAVQVCARKRKTFVLVDTGSVYGFG 400
                 ++   +  T VL +   +Y FG
Sbjct: 272 WGAKVTRIACGRYHTLVLQENNKIYSFG 299



 Score = 89.7 bits (221), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 62/163 (38%), Positives = 83/163 (50%), Gaps = 6/163 (3%)

Query: 312 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE-IDKTLPEPLS 370
           PR ++ F R  I V +V+ G  H VAL   G VYTWG+   G LG G +    + P+ + 
Sbjct: 108 PRMLEAFCR--IPVSQVACGSRHTVALTKEGQVYTWGQNSRGQLGLGKKGCSISSPQCVR 165

Query: 371 SLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAH 430
           SL     VQV A    +F L  +GSV+G+G    G LG  D   S     P  +DSL   
Sbjct: 166 SLSGMPLVQVSAGGDHSFALSVSGSVFGWGRNDCGQLGLGD---SQDRCTPTSVDSLNLK 222

Query: 431 HVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEP 473
             + IS G  HT ++T  G +F FG  +  QLGH++ R  L P
Sbjct: 223 KTTSISCGKDHTAILTKHGTVFTFGSGQFGQLGHNSSRNELRP 265



 Score = 59.7 bits (143), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 42/140 (30%), Positives = 66/140 (47%), Gaps = 3/140 (2%)

Query: 114 MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +Q++ G  H+  +S S SVF  G + CG LG G    +C   T ++  +      +S  +
Sbjct: 173 VQVSAGGDHSFALSVSGSVFGWGRNDCGQLGLGDSQDRCTP-TSVDSLNLKKTTSISCGK 231

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
           +H A + + G VFT G       GH +++R   RPRLV  L G    ++  G   T  L 
Sbjct: 232 DHTAILTKHGTVFTFGSGQFGQLGH-NSSRNELRPRLVAELWGAKVTRIACGRYHTLVLQ 290

Query: 233 IRGHVHTCGSNTHGQLGHGD 252
               +++ G N   QLG  +
Sbjct: 291 ENNKIYSFGCNDQNQLGRSN 310



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 50/205 (24%), Positives = 85/205 (41%), Gaps = 20/205 (9%)

Query: 288 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 347
            + ++  +G+ F +   +  +  + R  Q F +    +  V  GD+ V+ L   G VY  
Sbjct: 40  ALAFAKTNGNAFVMRTSDGENGARMRGKQKFVKCKEKIEAVGCGDDEVILLSEKGSVY-- 97

Query: 348 GKGYCGALGHGDEIDKT----LPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 403
                        +D T    LP  L +       QV    R T  L   G VY +G   
Sbjct: 98  ------------RVDVTQALYLPRMLEAFCRIPVSQVACGSRHTVALTKEGQVYTWGQNS 145

Query: 404 FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 463
            G LG   +G S  +  P+ + SL    + Q+S G  H+  ++  G +FG+G N+  QLG
Sbjct: 146 RGQLGLGKKGCS--ISSPQCVRSLSGMPLVQVSAGGDHSFALSVSGSVFGWGRNDCGQLG 203

Query: 464 HDTLRGCLEPTEIFIQEMEEDTGLA 488
               +    PT +    +++ T ++
Sbjct: 204 LGDSQDRCTPTSVDSLNLKKTTSIS 228


>gi|338533363|ref|YP_004666697.1| RCC1 repeat-containing protein [Myxococcus fulvus HW-1]
 gi|337259459|gb|AEI65619.1| RCC1 repeat-containing protein [Myxococcus fulvus HW-1]
          Length = 1379

 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 119/439 (27%), Positives = 186/439 (42%), Gaps = 35/439 (7%)

Query: 45   SHGLYPQKFRSLVDLAASQLCALHSIYAGMSRNVQIELLNRCN--GNWKRVLRFLQ-SVE 101
            S+ L P + + L+D+ A      H   AG    +    LN     G      R L   V+
Sbjct: 913  SYRLLPVQVQGLMDVTAMAAGGYHMAAAGQDGTLWTWGLNSYGQLGGGPLSYRLLPVQVQ 972

Query: 102  HSSDIVETSAGNMQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFP 160
                +   +AG        YH      + ++++ G +  G LG GP  +Q ++  ++   
Sbjct: 973  GLMSVTAMAAGG-------YHMAAAGQDGTLWTWGLNSYGQLGGGP-LSQSLTPVQVQVQ 1024

Query: 161  SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQ 220
                V  ++A  +H   V Q G V++ G N+    G   T + +  P  V+ L GV    
Sbjct: 1025 GLTGVAAIAAGFSHTLAVRQDGTVWSWGGNAYGQLGDGTTAQSL-TPVQVQGLTGVTA-- 1081

Query: 221  VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 280
            ++AG   T  L   G V   G N+ GQLG G T  R TP  +  L     V+ IAAG  +
Sbjct: 1082 ISAGDAHTVALRRDGTVWAWGRNSWGQLGDGTTTHRATPVQVQGLT---GVIAIAAGSLH 1138

Query: 281  MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 340
             +A+  +G V+++G  S   LG G       P  +Q        V+ ++AG  H VAL  
Sbjct: 1139 TVALRQDGTVWAWGRNSWGQLGDGTTTHRATPVQVQGL----TGVIAIAAGSLHTVALRQ 1194

Query: 341  SGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 400
             G V+ WG    G LG G    +  P  +  L       + A    T  +   G+ + +G
Sbjct: 1195 DGTVWAWGFNDLGQLGDGTTTRRLTPAQVQGLTG--VTTIAAGYFHTAAVRQDGTAWTWG 1252

Query: 401  WMGFGSLG---FPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDN 457
            +  +G LG   F DR        P  +  L    VS ++ G  HTVVV + G ++ +G+N
Sbjct: 1253 FNLWGQLGDGTFTDRAT------PVQVQGLTG--VSALAAGYAHTVVVGEDGTVWAWGNN 1304

Query: 458  ERAQLGHDTLRGCLEPTEI 476
               QLG+ +      P ++
Sbjct: 1305 SGTQLGNGSSTDRSTPVQV 1323



 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 103/356 (28%), Positives = 154/356 (43%), Gaps = 21/356 (5%)

Query: 122 HTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
           HT+ L  + ++++ G++  G LG G   T  V FT +       V  ++A   +     Q
Sbjct: 332 HTVALRQDGTLWAWGNNSSGQLGDG---TTTVRFTPVQVQGLTGVTAIAAGYLYTVASKQ 388

Query: 181 SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTC 240
            G V+  GDN     G   T R +  P  V+ L GV    + AG  +T      G V   
Sbjct: 389 DGTVWAWGDNEWGQLGDGTTTRRL-TPVQVQGLTGVTA--IAAGYLYTVASKQDGTVWAW 445

Query: 241 GSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 300
           G N   QLG G    R TP  +  LE    +  IAA     +AV  +G V+++G  +   
Sbjct: 446 GDNKRSQLGEGAVSQRHTPGEVQGLE---GITAIAASNLLTVAVRQDGTVWAWGDNARGQ 502

Query: 301 LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 360
           LG G     L P  +Q        V  V+A D H+VA+   G V+ WG G+ G LG G  
Sbjct: 503 LGDGTTTRRLTPVQVQGL----AGVTAVAASDYHLVAVRQDGTVWAWGVGFWGQLGDGTG 558

Query: 361 IDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLR 420
           +D++ P  +  L    A  + A    T  L   G+V+ +G+  +G LG    G +   L 
Sbjct: 559 MDRSTPVQVQGLTGVTA--IAAGSNHTVALRQDGTVWAWGFNNYGQLG---DGTTAGHLT 613

Query: 421 PRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 476
           P  +  +       I+ G  HTV +   G ++ +G N   QLG  T      P ++
Sbjct: 614 PVQVPGVTG--AVAIAAGGSHTVALLQDGTVWTWGYNIWGQLGDGTTTHRHSPVQV 667



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 108/356 (30%), Positives = 159/356 (44%), Gaps = 23/356 (6%)

Query: 122 HTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
           HTL +  + +V++ G++  G LG G  T +   F+ +   + A    ++A   H     Q
Sbjct: 84  HTLAVRQDGTVWAWGNNDDGQLGDGTTTRR---FSPVQVMTGA--TAIAAGIYHTVAASQ 138

Query: 181 SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTC 240
            G V+T G NSS   G   T+   F P  V+ L GV    V AG N +  L   G V T 
Sbjct: 139 DGTVWTWGRNSSGQLGD-GTSIQRFSPVQVQGLTGVTA--VAAGRNHSAALGQGGTVWTW 195

Query: 241 GSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 300
           G N  GQLG G +  R TP  +  L     V+ I+A  S  +A+  +G V+++G+ S+  
Sbjct: 196 GDNLVGQLGDGTSTQRLTPVQVQGLT---GVIAISANDSETVALRQDGTVWAWGNNSSGQ 252

Query: 301 LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 360
           LG G       P  +Q     G  V  ++AG    VAL   G ++ WG    G LG+G  
Sbjct: 253 LGDGTTTVRFTP--VQVLGLTG--VTAIAAGGGFAVALRQDGTLWAWGSNSRGQLGNGTT 308

Query: 361 IDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLR 420
                PE +  L    A  + A    T  L   G+++ +G    G LG    G +     
Sbjct: 309 FGSYRPEQVQGLTGVTA--IAASGIHTVALRQDGTLWAWGNNSSGQLG---DGTTTVRFT 363

Query: 421 PRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 476
           P  +  L    V+ I+ G  +TV     G ++ +GDNE  QLG  T    L P ++
Sbjct: 364 PVQVQGLTG--VTAIAAGYLYTVASKQDGTVWAWGDNEWGQLGDGTTTRRLTPVQV 417



 Score =  113 bits (282), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 124/445 (27%), Positives = 182/445 (40%), Gaps = 39/445 (8%)

Query: 45   SHGLYPQKFRSLVDLAASQLCALHSIYAGMSRNVQIELLN---RCNGNWKRVLRFLQSVE 101
            S+ L P + + L+ + A      H   AG    +    LN   +  G         QS+ 
Sbjct: 963  SYRLLPVQVQGLMSVTAMAAGGYHMAAAGQDGTLWTWGLNSYGQLGGG-----PLSQSLT 1017

Query: 102  HSSDIVETSAGNMQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFP 160
                 V+   G   I  G  HTL +  + +V+S G +  G LG G   T   S T +   
Sbjct: 1018 PVQVQVQGLTGVAAIAAGFSHTLAVRQDGTVWSWGGNAYGQLGDG---TTAQSLTPVQVQ 1074

Query: 161  SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCG-----HRDTNRPIFRPRLVEALKG 215
                V  +SA + H   + + G V+  G NS    G     HR T      P  V+ L G
Sbjct: 1075 GLTGVTAISAGDAHTVALRRDGTVWAWGRNSWGQLGDGTTTHRAT------PVQVQGLTG 1128

Query: 216  VPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA 275
            V    + AG   T  L   G V   G N+ GQLG G T  R TP  +  L     V+ IA
Sbjct: 1129 VIA--IAAGSLHTVALRQDGTVWAWGRNSWGQLGDGTTTHRATPVQVQGLT---GVIAIA 1183

Query: 276  AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHV 335
            AG  + +A+  +G V+++G      LG G     L P  +Q        V  ++AG  H 
Sbjct: 1184 AGSLHTVALRQDGTVWAWGFNDLGQLGDGTTTRRLTPAQVQGL----TGVTTIAAGYFHT 1239

Query: 336  VALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGS 395
             A+   G  +TWG    G LG G   D+  P  +  L    A+   A    T V+ + G+
Sbjct: 1240 AAVRQDGTAWTWGFNLWGQLGDGTFTDRATPVQVQGLTGVSAL--AAGYAHTVVVGEDGT 1297

Query: 396  VYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFG 455
            V+ +G      LG    G S     P  +++L       ++ G +HTV ++  G  +G+G
Sbjct: 1298 VWAWGNNSGTQLG---NGSSTDRSTPVQVEALTGAF--SLAAGRFHTVAMSPDGAGWGWG 1352

Query: 456  DNERAQLGHDTLRGCLEPTEIFIQE 480
             N   Q+G  T      P  + +QE
Sbjct: 1353 RNNLGQVGDGTTADRPTPVNVMVQE 1377



 Score =  105 bits (262), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 104/366 (28%), Positives = 158/366 (43%), Gaps = 27/366 (7%)

Query: 116  ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
            +  G YH      + ++++ G +  G LG GP + + +    +       V  ++A   H
Sbjct: 880  MAAGGYHMAAAGQDGTLWTWGLNSYGQLGGGPLSYRLLP---VQVQGLMDVTAMAAGGYH 936

Query: 175  AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 234
             A   Q G ++T G NS    G    +  +  P  V+ L  V    + AG          
Sbjct: 937  MAAAGQDGTLWTWGLNSYGQLGGGPLSYRLL-PVQVQGLMSVTA--MAAGGYHMAAAGQD 993

Query: 235  GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE----EVGSVVQIAAGPSYMLAVTGNGVV 290
            G + T G N++GQLG G     P  +S+ P++     +  V  IAAG S+ LAV  +G V
Sbjct: 994  GTLWTWGLNSYGQLGGG-----PLSQSLTPVQVQVQGLTGVAAIAAGFSHTLAVRQDGTV 1048

Query: 291  YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKG 350
            +S+G  +   LG G     L P  +Q        V  +SAGD H VAL   G V+ WG+ 
Sbjct: 1049 WSWGGNAYGQLGDGTTAQSLTPVQVQGL----TGVTAISAGDAHTVALRRDGTVWAWGRN 1104

Query: 351  YCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFP 410
              G LG G    +  P  +  L   +A  + A    T  L   G+V+ +G   +G LG  
Sbjct: 1105 SWGQLGDGTTTHRATPVQVQGLTGVIA--IAAGSLHTVALRQDGTVWAWGRNSWGQLG-- 1160

Query: 411  DRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGC 470
              G +     P  +  L    V  I+ G  HTV +   G ++ +G N+  QLG  T    
Sbjct: 1161 -DGTTTHRATPVQVQGLTG--VIAIAAGSLHTVALRQDGTVWAWGFNDLGQLGDGTTTRR 1217

Query: 471  LEPTEI 476
            L P ++
Sbjct: 1218 LTPAQV 1223



 Score = 99.8 bits (247), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 91/318 (28%), Positives = 134/318 (42%), Gaps = 19/318 (5%)

Query: 159 FPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPC 218
           F + A  V  + + NH   V Q G V+  G+N     G   T R  F P  V+ + G   
Sbjct: 69  FAAPAGPVLAAGNGNHTLAVRQDGTVWAWGNNDDGQLGDGTTTRR-FSP--VQVMTGATA 125

Query: 219 KQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGP 278
             + AG+  T   +  G V T G N+ GQLG G ++ R +P  +  L     V  +AAG 
Sbjct: 126 --IAAGIYHTVAASQDGTVWTWGRNSSGQLGDGTSIQRFSPVQVQGLT---GVTAVAAGR 180

Query: 279 SYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
           ++  A+   G V+++G      LG G     L P  +Q        V+ +SA D   VAL
Sbjct: 181 NHSAALGQGGTVWTWGDNLVGQLGDGTSTQRLTPVQVQGL----TGVIAISANDSETVAL 236

Query: 339 DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYG 398
              G V+ WG    G LG G    +  P  +  L    A  + A       L   G+++ 
Sbjct: 237 RQDGTVWAWGNNSSGQLGDGTTTVRFTPVQVLGLTGVTA--IAAGGGFAVALRQDGTLWA 294

Query: 399 FGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNE 458
           +G    G LG    G +    RP  +  L    V+ I+    HTV +   G L+ +G+N 
Sbjct: 295 WGSNSRGQLG---NGTTFGSYRPEQVQGLTG--VTAIAASGIHTVALRQDGTLWAWGNNS 349

Query: 459 RAQLGHDTLRGCLEPTEI 476
             QLG  T      P ++
Sbjct: 350 SGQLGDGTTTVRFTPVQV 367



 Score = 91.3 bits (225), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 98/386 (25%), Positives = 155/386 (40%), Gaps = 25/386 (6%)

Query: 107 VETSAGNMQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHV 165
           V+  AG   +    YH + +  + +V++ G    G LG G   T     T +       V
Sbjct: 517 VQGLAGVTAVAASDYHLVAVRQDGTVWAWGVGFWGQLGDG---TGMDRSTPVQVQGLTGV 573

Query: 166 VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTN---RPIFRPRLVEALKGVPCKQVT 222
             ++A  NH   + Q G V+  G N+    G   T     P+  P +  A+       + 
Sbjct: 574 TAIAAGSNHTVALRQDGTVWAWGFNNYGQLGDGTTAGHLTPVQVPGVTGAVA------IA 627

Query: 223 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 282
           AG + T  L   G V T G N  GQLG G T  R +P  +  L +V   + IA    + +
Sbjct: 628 AGGSHTVALLQDGTVWTWGYNIWGQLGDGTTTHRHSPVQVQGLADV---IAIATNNGHTV 684

Query: 283 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
           AV  +G V+++G  S+  LG G     L P  +            +       VA+    
Sbjct: 685 AVRQDGTVWTWGLNSSGQLGDGTTTQRLTPVQVHGL----TDATAILTSSSQTVAMRQDR 740

Query: 343 YVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWM 402
            ++ WG  + G LG G    +  P  +  L    A+   A           G+++ +G  
Sbjct: 741 TLWAWGDNHWGQLGDGTTTRRLTPVQVQGLMDVTAM--AAGGYHMAAAGQDGTLWTWGLN 798

Query: 403 GFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQL 462
            +G LG    G     L P  +  L +   + I+ G  HTV V   G ++ +G N   QL
Sbjct: 799 SYGQLG---GGPLSYRLLPVQVQGLTSATATAIAAGDSHTVAVRQDGTVWAWGSNFSGQL 855

Query: 463 GHDTLRGCLEPTEIFIQEMEEDTGLA 488
           G  T    L P ++ +Q + + T +A
Sbjct: 856 GDGTTAQSLTPVQVQVQGLMDVTAMA 881



 Score = 88.6 bits (218), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 104/385 (27%), Positives = 162/385 (42%), Gaps = 23/385 (5%)

Query: 107 VETSAGNMQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHV 165
           V+   G   I  G  HT+ L  + +V++ G +  G LG G   T     T +  P     
Sbjct: 567 VQGLTGVTAIAAGSNHTVALRQDGTVWAWGFNNYGQLGDG---TTAGHLTPVQVPGVTGA 623

Query: 166 VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 225
           V ++A  +H   +LQ G V+T G N     G   T      P  V+ L  V    +    
Sbjct: 624 VAIAAGGSHTVALLQDGTVWTWGYNIWGQLGDGTTTHR-HSPVQVQGLADV----IAIAT 678

Query: 226 NFTGFLTIR--GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
           N    + +R  G V T G N+ GQLG G T  R TP  +  L +  +++  +   S  +A
Sbjct: 679 NNGHTVAVRQDGTVWTWGLNSSGQLGDGTTTQRLTPVQVHGLTDATAILTSS---SQTVA 735

Query: 284 VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 343
           +  +  ++++G      LG G     L P  +Q      + V  ++AG  H+ A    G 
Sbjct: 736 MRQDRTLWAWGDNHWGQLGDGTTTRRLTPVQVQGL----MDVTAMAAGGYHMAAAGQDGT 791

Query: 344 VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 403
           ++TWG    G LG G    + LP  +  L S  A  + A    T  +   G+V+ +G   
Sbjct: 792 LWTWGLNSYGQLGGGPLSYRLLPVQVQGLTSATATAIAAGDSHTVAVRQDGTVWAWGSNF 851

Query: 404 FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 463
            G LG    G + + L P  +       V+ ++ G YH       G L+ +G N   QLG
Sbjct: 852 SGQLG---DGTTAQSLTPVQVQVQGLMDVTAMAAGGYHMAAAGQDGTLWTWGLNSYGQLG 908

Query: 464 HDTLRGCLEPTEIFIQEMEEDTGLA 488
              L   L P +  +Q + + T +A
Sbjct: 909 GGPLSYRLLPVQ--VQGLMDVTAMA 931


>gi|442318560|ref|YP_007358581.1| RCC1 repeat-containing protein [Myxococcus stipitatus DSM 14675]
 gi|441486202|gb|AGC42897.1| RCC1 repeat-containing protein [Myxococcus stipitatus DSM 14675]
          Length = 866

 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 103/354 (29%), Positives = 170/354 (48%), Gaps = 21/354 (5%)

Query: 130 SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGD 189
           ++F+ G +  G LG G  TTQ  S T +     + +V+ +    H+  +   G V+T G 
Sbjct: 470 TLFAWGHNTNGELGDG-TTTQRTSPTAV---VVSGIVKTAGGSAHSVALGAGGAVWTWGY 525

Query: 190 NSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLG 249
           N+    G+  T + +   +L   + GV    V AG+N T  L+  G V   G N +GQLG
Sbjct: 526 NAYGQLGNGTTTQVVTPTQL-PGMSGV--IDVAAGVNHTVALSADGTVAAWGYNAYGQLG 582

Query: 250 HGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDE 309
           +G T ++ TP+S+  L+    V  I+AG ++ +A+  +G V+++GS     LG G     
Sbjct: 583 NGTTANQLTPQSVPELD---GVTAISAGSTHTVALKADGTVWAWGSNLYGQLGDGTFTHR 639

Query: 310 LQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPL 369
             P  + +      +VV ++AG  H VA+   G ++ WG G  G LG G   ++++P  +
Sbjct: 640 SSPVQVPSLE----NVVSIAAGHFHTVAVKGDGTLWVWGYGPQGQLGLGTTTNQSVPVQV 695

Query: 370 SSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRA 429
           S L    AV + A    T  L+  G V+ +G+   G LG  D  +  +   P ++  L  
Sbjct: 696 SGLGH--AVAIAAGGYHTVALLANGQVWTWGYNSSGQLG--DATIIQR-YSPVLVPGLT- 749

Query: 430 HHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQEMEE 483
            +V  ++ G Y T V+   G ++ FG N   QLG  T      PT   +  + +
Sbjct: 750 -NVIALAAGGYTTAVLKRDGTVWAFGYNPNGQLGDGTTTSRSSPTATLMNSVVD 802



 Score =  103 bits (256), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 110/379 (29%), Positives = 168/379 (44%), Gaps = 30/379 (7%)

Query: 116 ITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           ++ G YHTL + S  S+++ G++  G LG+G + TQ  + TR+       VV  SA   H
Sbjct: 150 VSPGVYHTLEVKSGGSLWAWGNNPSGQLGNG-QRTQRNAPTRVR--GLNQVVSASAGAEH 206

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 234
           +  V + G V+T G N+    G   TN     P  V  +  V    V A  + T  L   
Sbjct: 207 SVAVTEDGSVWTWGSNAYGQLGD-GTNTLRAVPVQVPGMSDVVA--VAAAGSRTVALKAD 263

Query: 235 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 294
           G V T G N+ G+LG G T     P  +  L     V  IAAG  + LAV  +G  +S+G
Sbjct: 264 GTVWTWGINSSGELGDGTTTHSLLPIQVPNLS---GVTNIAAGLWHTLAVKKDGSAWSWG 320

Query: 295 SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVR-VSAGDEHVVALDSSGYVYTWGKGYCG 353
           + +   LG G   + L+P  +      G+  VR +S G  H VAL   G  + WG    G
Sbjct: 321 NNAYGQLGDGTTLNRLRPVLV-----AGLTGVRALSGGVVHTVALKWDGTAWGWGYNSAG 375

Query: 354 ALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRG 413
            LG+G   + ++P  +++L    AV++ A    T      G++Y +G   +G+LG  +  
Sbjct: 376 QLGNGTTTNSSIPVQVAALTQ--AVEIDAGGYHTLARRQDGTLYAWGDNFYGALGTGNT- 432

Query: 414 VSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGR------LFGFGDNERAQLGHDTL 467
            S  V     L  +R         G Y++V    +        LF +G N   +LG  T 
Sbjct: 433 TSSSVPVQVPLSGVR-----WFGAGYYYSVAERKKVNMAQVHTLFAWGHNTNGELGDGTT 487

Query: 468 RGCLEPTEIFIQEMEEDTG 486
                PT + +  + +  G
Sbjct: 488 TQRTSPTAVVVSGIVKTAG 506



 Score =  102 bits (255), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 123/481 (25%), Positives = 189/481 (39%), Gaps = 77/481 (16%)

Query: 50  PQKFRSLVDLAASQLCALHSIYAGMSRNVQIELLNRCN--GNWKRVLRFLQ-SVEHSSDI 106
           P + R L  + ++   A HS+      +V     N     G+    LR +   V   SD+
Sbjct: 188 PTRVRGLNQVVSASAGAEHSVAVTEDGSVWTWGSNAYGQLGDGTNTLRAVPVQVPGMSDV 247

Query: 107 VETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVV 166
           V  +A       G     L ++ +V++ G +  G LG G   T   S   I  P+ + V 
Sbjct: 248 VAVAA------AGSRTVALKADGTVWTWGINSSGELGDG---TTTHSLLPIQVPNLSGVT 298

Query: 167 QVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDT-NRPIFRPRLVEALKGVPCKQVTAGL 225
            ++A   H   V + G  ++ G+N+    G   T NR   RP LV  L GV  + ++ G+
Sbjct: 299 NIAAGLWHTLAVKKDGSAWSWGNNAYGQLGDGTTLNR--LRPVLVAGLTGV--RALSGGV 354

Query: 226 NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 285
             T  L   G     G N+ GQLG+G T +   P  +A L +    V+I AG  + LA  
Sbjct: 355 VHTVALKWDGTAWGWGYNSAGQLGNGTTTNSSIPVQVAALTQA---VEIDAGGYHTLARR 411

Query: 286 GNGVVYSFGSGSNFCLGHGEQHDELQP-----RAIQTF---------RRKGIH------- 324
            +G +Y++G      LG G       P       ++ F          RK ++       
Sbjct: 412 QDGTLYAWGDNFYGALGTGNTTSSSVPVQVPLSGVRWFGAGYYYSVAERKKVNMAQVHTL 471

Query: 325 -----------------------------VVRVSAGDEHVVALDSSGYVYTWGKGYCGAL 355
                                        +V+ + G  H VAL + G V+TWG    G L
Sbjct: 472 FAWGHNTNGELGDGTTTQRTSPTAVVVSGIVKTAGGSAHSVALGAGGAVWTWGYNAYGQL 531

Query: 356 GHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVS 415
           G+G       P  L  +     + V A    T  L   G+V  +G+  +G LG    G +
Sbjct: 532 GNGTTTQVVTPTQLPGMSG--VIDVAAGVNHTVALSADGTVAAWGYNAYGQLG---NGTT 586

Query: 416 DKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTE 475
              L P+ +  L    V+ IS G  HTV +   G ++ +G N   QLG  T      P +
Sbjct: 587 ANQLTPQSVPELDG--VTAISAGSTHTVALKADGTVWAWGSNLYGQLGDGTFTHRSSPVQ 644

Query: 476 I 476
           +
Sbjct: 645 V 645



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 81/271 (29%), Positives = 120/271 (44%), Gaps = 16/271 (5%)

Query: 218 CKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAG 277
           C  V+ G+  T  +   G +   G+N  GQLG+G    R  P  +  L +   VV  +AG
Sbjct: 147 CPSVSPGVYHTLEVKSGGSLWAWGNNPSGQLGNGQRTQRNAPTRVRGLNQ---VVSASAG 203

Query: 278 PSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
             + +AVT +G V+++GS +   LG G       P  +         VV V+A     VA
Sbjct: 204 AEHSVAVTEDGSVWTWGSNAYGQLGDGTNTLRAVPVQVPGMS----DVVAVAAAGSRTVA 259

Query: 338 LDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVY 397
           L + G V+TWG    G LG G      LP  + +L       + A    T  +   GS +
Sbjct: 260 LKADGTVWTWGINSSGELGDGTTTHSLLPIQVPNLSG--VTNIAAGLWHTLAVKKDGSAW 317

Query: 398 GFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDN 457
            +G   +G LG    G +   LRP ++  L    V  +S G+ HTV +   G  +G+G N
Sbjct: 318 SWGNNAYGQLG---DGTTLNRLRPVLVAGLTG--VRALSGGVVHTVALKWDGTAWGWGYN 372

Query: 458 ERAQLGHDTLRGCLEPTEI--FIQEMEEDTG 486
              QLG+ T      P ++    Q +E D G
Sbjct: 373 SAGQLGNGTTTNSSIPVQVAALTQAVEIDAG 403



 Score = 91.3 bits (225), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 99/374 (26%), Positives = 161/374 (43%), Gaps = 41/374 (10%)

Query: 116 ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           ++ G  HT+ +  + + +  G +  G LG+G  T   +    +   +    V++ A   H
Sbjct: 350 LSGGVVHTVALKWDGTAWGWGYNSAGQLGNGTTTNSSIP---VQVAALTQAVEIDAGGYH 406

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTNR---PIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
                Q G ++  GDN     G  +T     P+  P     L GV  +   AG  ++   
Sbjct: 407 TLARRQDGTLYAWGDNFYGALGTGNTTSSSVPVQVP-----LSGV--RWFGAGYYYSVAE 459

Query: 232 TIR---GHVHT---CGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 285
             +     VHT    G NT+G+LG G T  R +P ++     V  +V+ A G ++ +A+ 
Sbjct: 460 RKKVNMAQVHTLFAWGHNTNGELGDGTTTQRTSPTAVV----VSGIVKTAGGSAHSVALG 515

Query: 286 GNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVY 345
             G V+++G  +   LG+G     + P  +         V+ V+AG  H VAL + G V 
Sbjct: 516 AGGAVWTWGYNAYGQLGNGTTTQVVTPTQLPGMS----GVIDVAAGVNHTVALSADGTVA 571

Query: 346 TWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFG 405
            WG    G LG+G   ++  P+ +  L    A+   A    T  L   G+V+ +G   +G
Sbjct: 572 AWGYNAYGQLGNGTTANQLTPQSVPELDGVTAI--SAGSTHTVALKADGTVWAWGSNLYG 629

Query: 406 SLG---FPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQL 462
            LG   F  R  S  V  P +       +V  I+ G +HTV V   G L+ +G   + QL
Sbjct: 630 QLGDGTFTHR--SSPVQVPSL------ENVVSIAAGHFHTVAVKGDGTLWVWGYGPQGQL 681

Query: 463 GHDTLRGCLEPTEI 476
           G  T      P ++
Sbjct: 682 GLGTTTNQSVPVQV 695



 Score = 68.6 bits (166), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 75/263 (28%), Positives = 113/263 (42%), Gaps = 17/263 (6%)

Query: 112 GNMQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSA 170
           G   I+ G  HT+ L ++ +V++ GS+L G LG G  T +    + +  PS  +VV ++A
Sbjct: 600 GVTAISAGSTHTVALKADGTVWAWGSNLYGQLGDGTFTHRS---SPVQVPSLENVVSIAA 656

Query: 171 SENHAAFVLQSGQVFTCGDNSSFCCG-HRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
              H   V   G ++  G       G    TN+ +  P  V  L       + AG   T 
Sbjct: 657 GHFHTVAVKGDGTLWVWGYGPQGQLGLGTTTNQSV--PVQVSGLG--HAVAIAAGGYHTV 712

Query: 230 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 289
            L   G V T G N+ GQLG    + R +P  +  L  V   + +AAG      +  +G 
Sbjct: 713 ALLANGQVWTWGYNSSGQLGDATIIQRYSPVLVPGLTNV---IALAAGGYTTAVLKRDGT 769

Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 349
           V++FG   N  LG G       P A  T       VV +S+G  H++ L    +V   G 
Sbjct: 770 VWAFGYNPNGQLGDGTTTSRSSPTA--TLMNS---VVDLSSGVNHMMGLRKDAWVRACGY 824

Query: 350 GYCGALGHGDEIDKTLPEPLSSL 372
              G LG G    +  P  +++L
Sbjct: 825 NSAGQLGDGTTTQRPTPVQVTNL 847



 Score = 56.2 bits (134), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 46/161 (28%), Positives = 76/161 (47%), Gaps = 10/161 (6%)

Query: 114 MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           + I  G YHT+ L++N  V++ G +  G LG   + T    ++ +  P   +V+ ++A  
Sbjct: 702 VAIAAGGYHTVALLANGQVWTWGYNSSGQLG---DATIIQRYSPVLVPGLTNVIALAAGG 758

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
              A + + G V+  G N +   G    T+R      L+ ++       +++G+N    L
Sbjct: 759 YTTAVLKRDGTVWAFGYNPNGQLGDGTTTSRSSPTATLMNSVV-----DLSSGVNHMMGL 813

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV 272
                V  CG N+ GQLG G T  RPTP  +  L   GS+V
Sbjct: 814 RKDAWVRACGYNSAGQLGDGTTTQRPTPVQVTNLPGDGSIV 854


>gi|356569687|ref|XP_003553028.1| PREDICTED: uncharacterized protein LOC100797223 [Glycine max]
          Length = 1043

 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 88/304 (28%), Positives = 139/304 (45%), Gaps = 20/304 (6%)

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            HAA   + G+VF  G       G +  +  I  P++V++L G+  K V  G   T  LT
Sbjct: 314 KHAALATKQGEVFCWGHGKWGRLGQK-IDMDISSPKIVDSLNGLHVKNVACGEYHTCALT 372

Query: 233 IRGHVHTCGSNT--HGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 290
             G V+T G++      L  G T  +  P+ +    +  S+  +A G  +   V+  G +
Sbjct: 373 DSGEVYTWGNDVCCADLLIEGRTRSQWIPQKLGGSLDGISISSVACGEWHTAIVSSCGRL 432

Query: 291 YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL-----------D 339
           +++G G+   LGHG+      P+ +++    G+ V   + G  H  A+            
Sbjct: 433 FTYGDGTFGVLGHGDLRSYSSPKEVESL--SGLRVRSAACGSWHTAAIVEVMFDRFRYNS 490

Query: 340 SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGF 399
           +SG ++TWG G  G LGH D   K +P  ++ L  +  VQV   +  T  L + G V+  
Sbjct: 491 ASGKLFTWGDGDEGRLGHVDNGSKLVPTRVTQLVDYDFVQVSCGRMLTVALTNMGKVFAM 550

Query: 400 GWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNER 459
           G   +G LG P     DK +   +   L+   V  ISTG YH  V+T  G ++ +G  E 
Sbjct: 551 GSAKYGQLGNPH--ARDKAV--MVEGQLKQEFVKVISTGSYHVAVLTSGGSVYTWGRGEN 606

Query: 460 AQLG 463
            QLG
Sbjct: 607 GQLG 610



 Score = 92.0 bits (227), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 94/347 (27%), Positives = 151/347 (43%), Gaps = 29/347 (8%)

Query: 46  HGLYPQKFRSLVDLAASQLCALHSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSD 105
           + L P+   S   L    + AL   +A ++   Q E+    +G W R+ + +     S  
Sbjct: 291 YSLVPKLLESTAMLDVHNI-ALGGKHAALATK-QGEVFCWGHGKWGRLGQKIDMDISSPK 348

Query: 106 IVETSAG--NMQITTGRYHTLLISNS-SVFSCGSSLC--GVLGHGPETTQCVSFTRINFP 160
           IV++  G     +  G YHT  +++S  V++ G+ +C   +L  G   +Q +        
Sbjct: 349 IVDSLNGLHVKNVACGEYHTCALTDSGEVYTWGNDVCCADLLIEGRTRSQWIPQKLGGSL 408

Query: 161 SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQ 220
               +  V+  E H A V   G++FT GD +    GH D  R    P+ VE+L G+  + 
Sbjct: 409 DGISISSVACGEWHTAIVSSCGRLFTYGDGTFGVLGHGDL-RSYSSPKEVESLSGLRVRS 467

Query: 221 VTAGLNFTG-----------FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG 269
              G   T            + +  G + T G    G+LGH D   +  P  +  L +  
Sbjct: 468 AACGSWHTAAIVEVMFDRFRYNSASGKLFTWGDGDEGRLGHVDNGSKLVPTRVTQLVDY- 526

Query: 270 SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDE---LQPRAIQTFRRKGIHVV 326
             VQ++ G    +A+T  G V++ GS     LG+    D+   ++ +  Q F      V 
Sbjct: 527 DFVQVSCGRMLTVALTNMGKVFAMGSAKYGQLGNPHARDKAVMVEGQLKQEF------VK 580

Query: 327 RVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
            +S G  HV  L S G VYTWG+G  G LG GD  D+  P  + +L+
Sbjct: 581 VISTGSYHVAVLTSGGSVYTWGRGENGQLGLGDTEDRYTPCFVEALR 627



 Score = 79.7 bits (195), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 72/277 (25%), Positives = 119/277 (42%), Gaps = 22/277 (7%)

Query: 207 PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 266
           P+L+E+   +    +  G       T +G V   G    G+LG    +D  +PK +  L 
Sbjct: 295 PKLLESTAMLDVHNIALGGKHAALATKQGEVFCWGHGKWGRLGQKIDMDISSPKIVDSLN 354

Query: 267 EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC----LGHGEQHDELQPRAIQTFRRKG 322
            +  V  +A G  +  A+T +G VY++G+  + C    L  G    +  P+ +      G
Sbjct: 355 GL-HVKNVACGEYHTCALTDSGEVYTWGN--DVCCADLLIEGRTRSQWIPQKLGG-SLDG 410

Query: 323 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCA 382
           I +  V+ G+ H   + S G ++T+G G  G LGHGD    + P+ + SL          
Sbjct: 411 ISISSVACGEWHTAIVSSCGRLFTYGDGTFGVLGHGDLRSYSSPKEVESLSGLRVRSAAC 470

Query: 383 RKRKTFVLVD-----------TGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHH 431
               T  +V+           +G ++ +G    G LG  D G     L P  +  L  + 
Sbjct: 471 GSWHTAAIVEVMFDRFRYNSASGKLFTWGDGDEGRLGHVDNGSK---LVPTRVTQLVDYD 527

Query: 432 VSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLR 468
             Q+S G   TV +T+ G++F  G  +  QLG+   R
Sbjct: 528 FVQVSCGRMLTVALTNMGKVFAMGSAKYGQLGNPHAR 564



 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 67/221 (30%), Positives = 96/221 (43%), Gaps = 21/221 (9%)

Query: 271 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 330
           V  IA G  +    T  G V+ +G G    LG     D   P+ + +    G+HV  V+ 
Sbjct: 306 VHNIALGGKHAALATKQGEVFCWGHGKWGRLGQKIDMDISSPKIVDSL--NGLHVKNVAC 363

Query: 331 GDEHVVALDSSGYVYTWGKGYCGA--LGHGDEIDKTLPEPLS-SLKSHLAVQVCARKRKT 387
           G+ H  AL  SG VYTWG   C A  L  G    + +P+ L  SL       V   +  T
Sbjct: 364 GEYHTCALTDSGEVYTWGNDVCCADLLIEGRTRSQWIPQKLGGSLDGISISSVACGEWHT 423

Query: 388 FVLVDTGSVYGFGWMGFGSLGFPD-RGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT 446
            ++   G ++ +G   FG LG  D R  S     P+ ++SL    V   + G +HT  + 
Sbjct: 424 AIVSSCGRLFTYGDGTFGVLGHGDLRSYSS----PKEVESLSGLRVRSAACGSWHTAAIV 479

Query: 447 ----DR-------GRLFGFGDNERAQLGHDTLRGCLEPTEI 476
               DR       G+LF +GD +  +LGH      L PT +
Sbjct: 480 EVMFDRFRYNSASGKLFTWGDGDEGRLGHVDNGSKLVPTRV 520



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 62/224 (27%), Positives = 99/224 (44%), Gaps = 18/224 (8%)

Query: 116 ITTGRYHTLLISN-SSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPS-----A 162
           +  G +HT ++S+   +F+ G    GVLGHG       P+  + +S  R+   +      
Sbjct: 416 VACGEWHTAIVSSCGRLFTYGDGTFGVLGHGDLRSYSSPKEVESLSGLRVRSAACGSWHT 475

Query: 163 AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 222
           A +V+V    +   +   SG++FT GD      GH D    +  P  V  L      QV+
Sbjct: 476 AAIVEVMF--DRFRYNSASGKLFTWGDGDEGRLGHVDNGSKLV-PTRVTQLVDYDFVQVS 532

Query: 223 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 282
            G   T  LT  G V   GS  +GQLG+    D+         +E   V  I+ G  ++ 
Sbjct: 533 CGRMLTVALTNMGKVFAMGSAKYGQLGNPHARDKAVMVEGQLKQEFVKV--ISTGSYHVA 590

Query: 283 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVV 326
            +T  G VY++G G N  LG G+  D   P  ++  R + ++ +
Sbjct: 591 VLTSGGSVYTWGRGENGQLGLGDTEDRYTPCFVEALRDRQVNTI 634



 Score = 66.6 bits (161), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 48/168 (28%), Positives = 78/168 (46%), Gaps = 4/168 (2%)

Query: 310 LQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPL 369
           L P+ +++     +H   ++ G +H       G V+ WG G  G LG   ++D + P+ +
Sbjct: 293 LVPKLLESTAMLDVH--NIALGGKHAALATKQGEVFCWGHGKWGRLGQKIDMDISSPKIV 350

Query: 370 SSLKSHLAVQVCARKRKTFVLVDTGSVYGFGW-MGFGSLGFPDRGVSDKVLRPRILDSLR 428
            SL       V   +  T  L D+G VY +G  +    L    R  S  + + ++  SL 
Sbjct: 351 DSLNGLHVKNVACGEYHTCALTDSGEVYTWGNDVCCADLLIEGRTRSQWIPQ-KLGGSLD 409

Query: 429 AHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 476
              +S ++ G +HT +V+  GRLF +GD     LGH  LR    P E+
Sbjct: 410 GISISSVACGEWHTAIVSSCGRLFTYGDGTFGVLGHGDLRSYSSPKEV 457



 Score = 46.2 bits (108), Expect = 0.034,   Method: Compositional matrix adjust.
 Identities = 56/187 (29%), Positives = 82/187 (43%), Gaps = 18/187 (9%)

Query: 102 HSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPS 161
           H++ IVE     +     RY++   ++  +F+ G    G LGH    ++ V  TR+    
Sbjct: 474 HTAAIVE-----VMFDRFRYNS---ASGKLFTWGDGDEGRLGHVDNGSKLVP-TRVTQLV 524

Query: 162 AAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPR--LVEA-LKGVPC 218
               VQVS        +   G+VF  G       G+     P  R +  +VE  LK    
Sbjct: 525 DYDFVQVSCGRMLTVALTNMGKVFAMGSAKYGQLGN-----PHARDKAVMVEGQLKQEFV 579

Query: 219 KQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGP 278
           K ++ G      LT  G V+T G   +GQLG GDT DR TP  +  L +   V  I  GP
Sbjct: 580 KVISTGSYHVAVLTSGGSVYTWGRGENGQLGLGDTEDRYTPCFVEALRDR-QVNTITCGP 638

Query: 279 SYMLAVT 285
           S+  A++
Sbjct: 639 SFTAAIS 645


>gi|126330876|ref|XP_001375975.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 [Monodelphis
           domestica]
          Length = 1016

 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 82/257 (31%), Positives = 124/257 (48%), Gaps = 6/257 (2%)

Query: 220 QVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPS 279
           Q   G   +  L   G V +CG+N+ GQLG         P  I  LE    +V ++ G  
Sbjct: 41  QAACGERHSLLLLSDGTVWSCGNNSCGQLGRKRCQKHGRPAQIQALE-TQDIVSVSCGKE 99

Query: 280 YMLAVTGNGVVYSFGSGSNFCLGHGE-QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
           + LA+   G V+S+GSGS+  LG  E +     P+ I         +++VS G  H +AL
Sbjct: 100 HSLAICKEGRVFSWGSGSDGQLGIREFKKLSSIPKKIDEL--SSFKIIQVSCGHYHSIAL 157

Query: 339 DSSGYVYTWGKGYCGALGHGDEI-DKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVY 397
              G V++WGK   G LG G+ +  +  P+ + SL      QV A    +F L  +G+ Y
Sbjct: 158 AQDGRVFSWGKNNHGQLGLGENVPSQASPQWVKSLDGIPLAQVAAGGAHSFALSFSGTSY 217

Query: 398 GFGWMGFGSLGFPDRGVS-DKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGD 456
           G+G    G L    +  S +++ +P  +  L+   V+ IS G  HT V+T  G++F FG 
Sbjct: 218 GWGRNNAGQLALSGKKESAEQISKPFSIGELKRLQVTYISCGDEHTAVLTQDGKVFTFGS 277

Query: 457 NERAQLGHDTLRGCLEP 473
           N+  QLG   + G   P
Sbjct: 278 NDSGQLGRQLISGMKGP 294



 Score = 95.9 bits (237), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 74/253 (29%), Positives = 125/253 (49%), Gaps = 16/253 (6%)

Query: 114 MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTR---INFPSAAHVVQVS 169
           +Q   G  H+LL+ S+ +V+SCG++ CG LG      +C    R   I       +V VS
Sbjct: 40  LQAACGERHSLLLLSDGTVWSCGNNSCGQLGR----KRCQKHGRPAQIQALETQDIVSVS 95

Query: 170 ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
             + H+  + + G+VF+ G  S    G R+  +    P+ ++ L      QV+ G   + 
Sbjct: 96  CGKEHSLAICKEGRVFSWGSGSDGQLGIREFKKLSSIPKKIDELSSFKIIQVSCGHYHSI 155

Query: 230 FLTIRGHVHTCGSNTHGQLGHGDTL-DRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG 288
            L   G V + G N HGQLG G+ +  + +P+ +  L+ +  + Q+AAG ++  A++ +G
Sbjct: 156 ALAQDGRVFSWGKNNHGQLGLGENVPSQASPQWVKSLDGI-PLAQVAAGGAHSFALSFSG 214

Query: 289 VVYSFG---SGSNFCLGHGEQHDEL-QPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
             Y +G   +G     G  E  +++ +P +I   +R  + V  +S GDEH   L   G V
Sbjct: 215 TSYGWGRNNAGQLALSGKKESAEQISKPFSIGELKR--LQVTYISCGDEHTAVLTQDGKV 272

Query: 345 YTWGKGYCGALGH 357
           +T+G    G LG 
Sbjct: 273 FTFGSNDSGQLGR 285


>gi|66801165|ref|XP_629508.1| regulator of chromosome condensation  domain-containing protein
           [Dictyostelium discoideum AX4]
 gi|60462899|gb|EAL61096.1| regulator of chromosome condensation  domain-containing protein
           [Dictyostelium discoideum AX4]
          Length = 455

 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 91/310 (29%), Positives = 142/310 (45%), Gaps = 34/310 (10%)

Query: 115 QITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
           ++  GR  TL+++ +  V   G +  G LG G +T    + T +   +  H++ +    +
Sbjct: 145 KVIGGRSFTLVLTRDGKVLGFGENNFGQLGLG-DTRNRTAPTPVETLNNQHIIDIGVGLD 203

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGH--------------------------RDTNRPIFR- 206
           H+  V ++G VF  G N     G                           R+   P    
Sbjct: 204 HSIAVTKAGHVFGWGYNVEGQIGQKVVEYTRMNSTTEVMDGEEEGGAGSLREQMIPDVEY 263

Query: 207 --PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLD-RPT-PKSI 262
             P LV  L+ +    V  G + T  L+ RG+V++ GSN  G LG G  L  R T P  I
Sbjct: 264 TLPTLVPGLEQIKISNVFCGYDSTFLLSARGNVYSFGSNEIGTLGLGSELKGRVTKPTKI 323

Query: 263 APLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHG-EQHDELQPRAIQTFRRK 321
              E    + Q+++G S+ L +T  G VYS G G+   LG G +  +   P  ++ F + 
Sbjct: 324 KFTETNEKIKQLSSGASHTLFLTSGGNVYSCGWGTEGRLGLGMDTSNRDSPTLLKYFNQN 383

Query: 322 GIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVC 381
            I +V+V+AG  H +ALD  G VYTWG G  G LGHG+E D+ LP+ ++       + + 
Sbjct: 384 KIKIVKVAAGGSHSMALDDQGRVYTWGNGSNGKLGHGNESDENLPKQINFFSHSNVIDIF 443

Query: 382 ARKRKTFVLV 391
           A    + VL+
Sbjct: 444 AGIDNSLVLI 453



 Score = 81.6 bits (200), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 81/321 (25%), Positives = 135/321 (42%), Gaps = 46/321 (14%)

Query: 181 SGQVFTCGDNSSFCCGHRDTNRPIFR-PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 239
           S +V+  G N S   G+       +R P  ++ LK    ++V  G +FT  LT  G V  
Sbjct: 108 SNKVYMWGTNKS---GNMSLPSEQYRFPTTIDLLKNTFVEKVIGGRSFTLVLTRDGKVLG 164

Query: 240 CGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS--VVQIAAGPSYMLAVTGNGVVYSFGSGS 297
            G N  GQLG GDT +R  P    P+E + +  ++ I  G  + +AVT  G V+ +G   
Sbjct: 165 FGENNFGQLGLGDTRNRTAP---TPVETLNNQHIIDIGVGLDHSIAVTKAGHVFGWGYNV 221

Query: 298 NFCLGH-----------------------GEQHDELQPRAIQTFRR--KGIHVVRVSA-- 330
              +G                        G   +++ P    T      G+  +++S   
Sbjct: 222 EGQIGQKVVEYTRMNSTTEVMDGEEEGGAGSLREQMIPDVEYTLPTLVPGLEQIKISNVF 281

Query: 331 -GDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLS---SLKSHLAVQVCARKRK 386
            G +    L + G VY++G    G LG G E+   + +P     +  +    Q+ +    
Sbjct: 282 CGYDSTFLLSARGNVYSFGSNEIGTLGLGSELKGRVTKPTKIKFTETNEKIKQLSSGASH 341

Query: 387 TFVLVDTGSVYGFGWMGFGSLGF-PDRGVSDKVLRPRILDSLRAHHVS--QISTGLYHTV 443
           T  L   G+VY  GW   G LG   D    D    P +L     + +   +++ G  H++
Sbjct: 342 TLFLTSGGNVYSCGWGTEGRLGLGMDTSNRDS---PTLLKYFNQNKIKIVKVAAGGSHSM 398

Query: 444 VVTDRGRLFGFGDNERAQLGH 464
            + D+GR++ +G+    +LGH
Sbjct: 399 ALDDQGRVYTWGNGSNGKLGH 419



 Score = 75.9 bits (185), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 69/268 (25%), Positives = 116/268 (43%), Gaps = 38/268 (14%)

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
           TI   V+  G+N  G +       R  P +I  L+    V ++  G S+ L +T +G V 
Sbjct: 106 TISNKVYMWGTNKSGNMSLPSEQYR-FPTTIDLLKNT-FVEKVIGGRSFTLVLTRDGKVL 163

Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 351
            FG  +   LG G+  +   P  ++T   +  H++ +  G +H +A+  +G+V+ WG   
Sbjct: 164 GFGENNFGQLGLGDTRNRTAPTPVETLNNQ--HIIDIGVGLDHSIAVTKAGHVFGWGYNV 221

Query: 352 CGALGH----------------GDE--------------IDKTLPEPLSSLKSHLAVQVC 381
            G +G                 G+E              ++ TLP  +  L+      V 
Sbjct: 222 EGQIGQKVVEYTRMNSTTEVMDGEEEGGAGSLREQMIPDVEYTLPTLVPGLEQIKISNVF 281

Query: 382 ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRP-RILDSLRAHHVSQISTGLY 440
                TF+L   G+VY FG    G+LG     +  +V +P +I  +     + Q+S+G  
Sbjct: 282 CGYDSTFLLSARGNVYSFGSNEIGTLGLGSE-LKGRVTKPTKIKFTETNEKIKQLSSGAS 340

Query: 441 HTVVVTDRGRLF--GFGDNERAQLGHDT 466
           HT+ +T  G ++  G+G   R  LG DT
Sbjct: 341 HTLFLTSGGNVYSCGWGTEGRLGLGMDT 368



 Score = 68.2 bits (165), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 55/206 (26%), Positives = 87/206 (42%), Gaps = 14/206 (6%)

Query: 290 VYSFGSGSNFCLGHGEQHDELQPR---------AIQTFRRKGIHVVRVSAGDEHVVALDS 340
           ++SFGS  N  LG    +D+L P           I+ F    ++   ++  +++      
Sbjct: 49  LFSFGSFDNLKLGVPGNNDKLIPTQITHLPPFLKIKQFGSSWLNSFLLTD-EQNENDPTI 107

Query: 341 SGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 400
           S  VY WG    G +    E     P  +  LK+    +V   +  T VL   G V GFG
Sbjct: 108 SNKVYMWGTNKSGNMSLPSE-QYRFPTTIDLLKNTFVEKVIGGRSFTLVLTRDGKVLGFG 166

Query: 401 WMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERA 460
              FG LG  D   +     P  +++L   H+  I  GL H++ VT  G +FG+G N   
Sbjct: 167 ENNFGQLGLGD---TRNRTAPTPVETLNNQHIIDIGVGLDHSIAVTKAGHVFGWGYNVEG 223

Query: 461 QLGHDTLRGCLEPTEIFIQEMEEDTG 486
           Q+G   +      +   + + EE+ G
Sbjct: 224 QIGQKVVEYTRMNSTTEVMDGEEEGG 249



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 82/328 (25%), Positives = 129/328 (39%), Gaps = 45/328 (13%)

Query: 155 TRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALK 214
           T I+      V +V    +    + + G+V   G+N+    G  DT R    P  VE L 
Sbjct: 133 TTIDLLKNTFVEKVIGGRSFTLVLTRDGKVLGFGENNFGQLGLGDT-RNRTAPTPVETLN 191

Query: 215 GVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHG----------------------- 251
                 +  GL+ +  +T  GHV   G N  GQ+G                         
Sbjct: 192 NQHIIDIGVGLDHSIAVTKAGHVFGWGYNVEGQIGQKVVEYTRMNSTTEVMDGEEEGGAG 251

Query: 252 -------DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHG 304
                    ++   P  +  LE++  +  +  G      ++  G VYSFGS     LG G
Sbjct: 252 SLREQMIPDVEYTLPTLVPGLEQI-KISNVFCGYDSTFLLSARGNVYSFGSNEIGTLGLG 310

Query: 305 EQHDELQPRAIQ----TFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG-D 359
               EL+ R  +     F      + ++S+G  H + L S G VY+ G G  G LG G D
Sbjct: 311 S---ELKGRVTKPTKIKFTETNEKIKQLSSGASHTLFLTSGGNVYSCGWGTEGRLGLGMD 367

Query: 360 EIDKTLPEPLSSLKSH--LAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDK 417
             ++  P  L     +    V+V A    +  L D G VY +G    G LG  +   SD+
Sbjct: 368 TSNRDSPTLLKYFNQNKIKIVKVAAGGSHSMALDDQGRVYTWGNGSNGKLGHGNE--SDE 425

Query: 418 VLRPRILDSLRAHHVSQISTGLYHTVVV 445
            L P+ ++     +V  I  G+ +++V+
Sbjct: 426 NL-PKQINFFSHSNVIDIFAGIDNSLVL 452



 Score = 45.8 bits (107), Expect = 0.047,   Method: Compositional matrix adjust.
 Identities = 34/102 (33%), Positives = 55/102 (53%), Gaps = 6/102 (5%)

Query: 108 ETSAGNMQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINF--PSAAH 164
           ET+    Q+++G  HTL L S  +V+SCG    G LG G +T+   S T + +   +   
Sbjct: 327 ETNEKIKQLSSGASHTLFLTSGGNVYSCGWGTEGRLGLGMDTSNRDSPTLLKYFNQNKIK 386

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGH---RDTNRP 203
           +V+V+A  +H+  +   G+V+T G+ S+   GH    D N P
Sbjct: 387 IVKVAAGGSHSMALDDQGRVYTWGNGSNGKLGHGNESDENLP 428


>gi|330800861|ref|XP_003288451.1| hypothetical protein DICPUDRAFT_79261 [Dictyostelium purpureum]
 gi|325081510|gb|EGC35023.1| hypothetical protein DICPUDRAFT_79261 [Dictyostelium purpureum]
          Length = 1909

 Score =  114 bits (284), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 88/296 (29%), Positives = 138/296 (46%), Gaps = 14/296 (4%)

Query: 157 INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGV 216
           I   S   +V VS    H+A V  +G++ T G       GH DT   +  P+++++L   
Sbjct: 683 IKLESLTDIVVVSIGFYHSAAVRANGELLTWGVGEEGQLGHGDTQNQV-EPKVIQSLTSF 741

Query: 217 PCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA 276
              QV  G   T  LT  G V+T GS+ +GQLG GDT     P  +  LE+  +V+QIA+
Sbjct: 742 WITQVQCGEKHTICLTKNGKVYTWGSSEYGQLGLGDTTRYCKPMPVTALEKY-NVLQIAS 800

Query: 277 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVV 336
           G ++   +T +  V  FG+G+            L P        K +H+ ++  G     
Sbjct: 801 GSTHCAVLTNSKEVLVFGNGAAMGAASIISIPTLVPSL------KYLHIDKLCCGHYSTA 854

Query: 337 ALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSV 396
           A+   G VYTWG G    LGHG+   ++ P+ + +L++    Q+    R T  L D+G +
Sbjct: 855 AISECGDVYTWGTGQ--ELGHGNNQTESTPKLVEALRNQSIRQISCGGRHTAFLTDSGRI 912

Query: 397 YGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLF 452
           +  G   FG LG    G  +K   P+ ++SL       +S G  + + + D  R F
Sbjct: 913 FTSGKDSFGQLGH-QAGDQNK---PKKIESLTKTTFISVSCGENYNIALFDTTRSF 964



 Score =  100 bits (249), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 77/297 (25%), Positives = 125/297 (42%), Gaps = 63/297 (21%)

Query: 221 VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP----------LEEVGS 270
           +++G  ++  LT  G V+          G G   + P P    P          LE +  
Sbjct: 639 ISSGSYYSAALTENGDVY--------MWGRGSVKNPPVPVLGIPQIEDQLLPIKLESLTD 690

Query: 271 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 330
           +V ++ G  +  AV  NG + ++G G    LGHG+  ++++P+ IQ+       + +V  
Sbjct: 691 IVVVSIGFYHSAAVRANGELLTWGVGEEGQLGHGDTQNQVEPKVIQSL--TSFWITQVQC 748

Query: 331 GDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVL 390
           G++H + L  +G VYTWG    G LG GD      P P+++L+ +  +Q+ +      VL
Sbjct: 749 GEKHTICLTKNGKVYTWGSSEYGQLGLGDTTRYCKPMPVTALEKYNVLQIASGSTHCAVL 808

Query: 391 VDTGSVYGFG---WMGFGSL-GFPDRGVSDKVLR-------------------------- 420
            ++  V  FG    MG  S+   P    S K L                           
Sbjct: 809 TNSKEVLVFGNGAAMGAASIISIPTLVPSLKYLHIDKLCCGHYSTAAISECGDVYTWGTG 868

Query: 421 -------------PRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 464
                        P+++++LR   + QIS G  HT  +TD GR+F  G +   QLGH
Sbjct: 869 QELGHGNNQTESTPKLVEALRNQSIRQISCGGRHTAFLTDSGRIFTSGKDSFGQLGH 925



 Score =  100 bits (248), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 74/233 (31%), Positives = 117/233 (50%), Gaps = 17/233 (7%)

Query: 232 TIRGHVHTCGSNTHGQLGH---GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG 288
           T RG + T GS ++ +LG         +PTP+ + P   V  +  I++G  Y  A+T NG
Sbjct: 596 TSRG-LMTWGSASNCKLGFKVASKEQSQPTPERL-PNFNVSDICSISSGSYYSAALTENG 653

Query: 289 VVYSFGSGSNF-----CLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 343
            VY +G GS        LG  +  D+L P  +++       +V VS G  H  A+ ++G 
Sbjct: 654 DVYMWGRGSVKNPPVPVLGIPQIEDQLLPIKLESL----TDIVVVSIGFYHSAAVRANGE 709

Query: 344 VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 403
           + TWG G  G LGHGD  ++  P+ + SL S    QV   ++ T  L   G VY +G   
Sbjct: 710 LLTWGVGEEGQLGHGDTQNQVEPKVIQSLTSFWITQVQCGEKHTICLTKNGKVYTWGSSE 769

Query: 404 FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGD 456
           +G LG  D   + +  +P  + +L  ++V QI++G  H  V+T+   +  FG+
Sbjct: 770 YGQLGLGD---TTRYCKPMPVTALEKYNVLQIASGSTHCAVLTNSKEVLVFGN 819



 Score = 73.2 bits (178), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 57/216 (26%), Positives = 90/216 (41%), Gaps = 49/216 (22%)

Query: 115 QITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
           Q+  G  HT+ L  N  V++ GSS  G LG G  T  C     +      +V+Q+++   
Sbjct: 745 QVQCGEKHTICLTKNGKVYTWGSSEYGQLGLGDTTRYCKPMP-VTALEKYNVLQIASGST 803

Query: 174 HAAFVLQSGQVFTCGDNSS-----------------------FCCGHRDT---------- 200
           H A +  S +V   G+ ++                        CCGH  T          
Sbjct: 804 HCAVLTNSKEVLVFGNGAAMGAASIISIPTLVPSLKYLHIDKLCCGHYSTAAISECGDVY 863

Query: 201 ------------NRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQL 248
                       N+    P+LVEAL+    +Q++ G   T FLT  G + T G ++ GQL
Sbjct: 864 TWGTGQELGHGNNQTESTPKLVEALRNQSIRQISCGGRHTAFLTDSGRIFTSGKDSFGQL 923

Query: 249 GHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 284
           GH    D+  PK I  L +  + + ++ G +Y +A+
Sbjct: 924 GH-QAGDQNKPKKIESLTKT-TFISVSCGENYNIAL 957



 Score = 47.8 bits (112), Expect = 0.014,   Method: Composition-based stats.
 Identities = 42/149 (28%), Positives = 63/149 (42%), Gaps = 13/149 (8%)

Query: 336 VALDSSGYVYTWGKGYCGALGH---GDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVD 392
           + LD+S  + TWG      LG      E  +  PE L +        + +    +  L +
Sbjct: 592 IHLDTSRGLMTWGSASNCKLGFKVASKEQSQPTPERLPNFNVSDICSISSGSYYSAALTE 651

Query: 393 TGSVYGFGWMGFGS-----LGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTD 447
            G VY +G     +     LG P   + D++L P  L+SL    +  +S G YH+  V  
Sbjct: 652 NGDVYMWGRGSVKNPPVPVLGIPQ--IEDQLL-PIKLESLT--DIVVVSIGFYHSAAVRA 706

Query: 448 RGRLFGFGDNERAQLGHDTLRGCLEPTEI 476
            G L  +G  E  QLGH   +  +EP  I
Sbjct: 707 NGELLTWGVGEEGQLGHGDTQNQVEPKVI 735


>gi|410903564|ref|XP_003965263.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Takifugu
            rubripes]
          Length = 3883

 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 90/321 (28%), Positives = 147/321 (45%), Gaps = 11/321 (3%)

Query: 160  PSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCK 219
            PS +   QV   +N  +F++QS  V T      +    +  +  ++ P ++ A +G    
Sbjct: 3047 PSLSQTQQVVCGQN-CSFLIQSNGVVTAVGEGQYGRLGQGNSDDLYVPTIISAFQGYVVT 3105

Query: 220  QVTAGLNFTGF---LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA 276
            Q+       G    LT  G V + G    G+LGHG+   +  PK I  L+    VVQ+A 
Sbjct: 3106 QLVTSCGSDGHSMALTETGEVFSWGDGDFGKLGHGNNERQRRPKQIEALQG-EDVVQLAC 3164

Query: 277  GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVV 336
            G  +   VT +G +++FGSG +  LG     +++ P  +     +G HV +VS G  H +
Sbjct: 3165 GFRHSAVVTADGKLFTFGSGESGRLGQRSTSNKMLPERVAAL--EGYHVGQVSCGLNHTL 3222

Query: 337  ALDSSGY-VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGS 395
             L   G  V+ +G G  G LG G    K  P+ +  L +    +VC   + + V+   G 
Sbjct: 3223 VLSLDGMAVWAFGDGDYGKLGAGSSTAKYYPQKVEQLCNKGMKKVCCGAQFSVVVACDGH 3282

Query: 396  VYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFG 455
            VY FG      +G PD  + ++   P+++ SL    +  I+ G  H + ++  G ++ +G
Sbjct: 3283 VYTFGQERL--IGLPDSMLKNRS-NPQVVPSLEGLFIEDIAVGCEHVLALSSTGDVYAWG 3339

Query: 456  DNERAQLGHDTLRGCLEPTEI 476
             N   QLG        EPT I
Sbjct: 3340 CNSEGQLGLGHCNPVKEPTLI 3360



 Score =  112 bits (280), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 80/274 (29%), Positives = 129/274 (47%), Gaps = 10/274 (3%)

Query: 184 VFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 243
           V+  G NSS       T   I  P+L +       + + AG   T  ++  G V  CG  
Sbjct: 383 VYVWGSNSSHQLAE-GTLEKILLPKLTQGFSDA--QTIEAGQYCTFSVSTDGSVKACGKG 439

Query: 244 THGQLGHGDTLDRPTPKSIA--PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCL 301
           ++G+LG GD+ ++  PK +   P   +  V        + LA+T +G V+S+G G    L
Sbjct: 440 SYGRLGLGDSNNQSLPKKLVLEPHRNIKKVSSSKGSDGHTLAITVDGEVFSWGDGEYGKL 499

Query: 302 GHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEI 361
           GHG    +  P+ IQ      I VV  SAG  H  A+   G +YTWG+G  G LGH D  
Sbjct: 500 GHGNSATQKYPKIIQGPLFSKI-VVSASAGYRHSAAVTKDGELYTWGEGDFGRLGHSDSQ 558

Query: 362 DKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRP 421
            + +P  +  + S +    C       V  D  +V+ FG    G LG    G +++V RP
Sbjct: 559 SRNMPTLVKDI-SGVGQVACGSSHTIAVAQDGRTVWSFGGGDNGKLG---HGDTNRVYRP 614

Query: 422 RILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFG 455
           +++++L    + ++  G   ++ +T  G++F +G
Sbjct: 615 KVIEALHGFIIRKVCAGSQSSLALTSAGQVFAWG 648



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 97/342 (28%), Positives = 149/342 (43%), Gaps = 18/342 (5%)

Query: 116 ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFP--SAAHVVQVSASE 172
           I  G+Y T  +S + SV +CG    G LG G    Q +    +  P  +   V     S+
Sbjct: 417 IEAGQYCTFSVSTDGSVKACGKGSYGRLGLGDSNNQSLPKKLVLEPHRNIKKVSSSKGSD 476

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEA-LKGVPCKQVTAGLNFTGFL 231
            H   +   G+VF+ GD      GH ++    + P++++  L        +AG   +  +
Sbjct: 477 GHTLAITVDGEVFSWGDGEYGKLGHGNSATQKY-PKIIQGPLFSKIVVSASAGYRHSAAV 535

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG-VV 290
           T  G ++T G    G+LGH D+  R  P  +  +  VG   Q+A G S+ +AV  +G  V
Sbjct: 536 TKDGELYTWGEGDFGRLGHSDSQSRNMPTLVKDISGVG---QVACGSSHTIAVAQDGRTV 592

Query: 291 YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKG 350
           +SFG G N  LGHG+ +   +P+ I+     G  + +V AG +  +AL S+G V+ WG G
Sbjct: 593 WSFGGGDNGKLGHGDTNRVYRPKVIEALH--GFIIRKVCAGSQSSLALTSAGQVFAWGCG 650

Query: 351 YCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFP 410
            C   G   E     P  +  L     + +         L     VY +G    G  G  
Sbjct: 651 SCLGCG-SSETTSLRPRFVEDLSITKIIDISCGDSHCLALSHENEVYAWGNNTMGQCG-- 707

Query: 411 DRGVSDKVLRPRILDSLRAHHVSQISTGLYH----TVVVTDR 448
               S  + RP+ +  L    + QI+ G  H    T V TDR
Sbjct: 708 QGHTSTPITRPKKVLGLEGVSIQQITAGTSHSLAWTAVPTDR 749



 Score =  108 bits (270), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 102/368 (27%), Positives = 164/368 (44%), Gaps = 19/368 (5%)

Query: 115  QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPS--AAHVVQVSAS 171
            Q+  G+  + LI SN  V + G    G LG G      V      F       +V    S
Sbjct: 3054 QVVCGQNCSFLIQSNGVVTAVGEGQYGRLGQGNSDDLYVPTIISAFQGYVVTQLVTSCGS 3113

Query: 172  ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
            + H+  + ++G+VF+ GD      GH +  R   RP+ +EAL+G    Q+  G   +  +
Sbjct: 3114 DGHSMALTETGEVFSWGDGDFGKLGHGNNERQ-RRPKQIEALQGEDVVQLACGFRHSAVV 3172

Query: 232  TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV-V 290
            T  G + T GS   G+LG   T ++  P+ +A LE    V Q++ G ++ L ++ +G+ V
Sbjct: 3173 TADGKLFTFGSGESGRLGQRSTSNKMLPERVAALEGY-HVGQVSCGLNHTLVLSLDGMAV 3231

Query: 291  YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKG 350
            ++FG G    LG G    +  P+ ++    KG+  V   A    VVA D  G+VYT+G+ 
Sbjct: 3232 WAFGDGDYGKLGAGSSTAKYYPQKVEQLCNKGMKKVCCGAQFSVVVACD--GHVYTFGQE 3289

Query: 351  YCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFP 410
                L      +++ P+ + SL+      +         L  TG VY +G    G LG  
Sbjct: 3290 RLIGLPDSMLKNRSNPQVVPSLEGLFIEDIAVGCEHVLALSSTGDVYAWGCNSEGQLGL- 3348

Query: 411  DRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG------- 463
              G  + V  P ++ +L+  ++ QIS G  H+   T        G     QLG       
Sbjct: 3349 --GHCNPVKEPTLITALQGKNIKQISAGRCHSSAWTTPSTSKNSGGPGNLQLGLPQSVPP 3406

Query: 464  -HDTLRGC 470
             ++TL+ C
Sbjct: 3407 QYNTLKDC 3414



 Score =  102 bits (254), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 76/233 (32%), Positives = 117/233 (50%), Gaps = 11/233 (4%)

Query: 234  RGHVHTCGSNTHGQL-GHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
            +  V+  G+  +GQL G G  L  PT   +AP   +    Q+  G +    +  NGVV +
Sbjct: 3019 KSDVYLWGNGRYGQLAGTGTNLTVPT---LAP--SLSQTQQVVCGQNCSFLIQSNGVVTA 3073

Query: 293  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG-DEHVVALDSSGYVYTWGKGY 351
             G G    LG G   D   P  I  F+   +  +  S G D H +AL  +G V++WG G 
Sbjct: 3074 VGEGQYGRLGQGNSDDLYVPTIISAFQGYVVTQLVTSCGSDGHSMALTETGEVFSWGDGD 3133

Query: 352  CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 411
             G LGHG+   +  P+ + +L+    VQ+    R + V+   G ++ FG    G LG   
Sbjct: 3134 FGKLGHGNNERQRRPKQIEALQGEDVVQLACGFRHSAVVTADGKLFTFGSGESGRLG--Q 3191

Query: 412  RGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT-DRGRLFGFGDNERAQLG 463
            R  S+K+L  R+  +L  +HV Q+S GL HT+V++ D   ++ FGD +  +LG
Sbjct: 3192 RSTSNKMLPERVA-ALEGYHVGQVSCGLNHTLVLSLDGMAVWAFGDGDYGKLG 3243



 Score = 99.4 bits (246), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 83/291 (28%), Positives = 132/291 (45%), Gaps = 21/291 (7%)

Query: 182 GQVFTCGDNSSFCCGHRDTNRPIFRPRLV----EALKGVPCKQVTAGLNFTGFLTIRGHV 237
           G V  CG  S    G  D+N      +LV      +K V   + + G   T  +T+ G V
Sbjct: 431 GSVKACGKGSYGRLGLGDSNNQSLPKKLVLEPHRNIKKVSSSKGSDG--HTLAITVDGEV 488

Query: 238 HTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 297
            + G   +G+LGHG++  +  PK I        VV  +AG  +  AVT +G +Y++G G 
Sbjct: 489 FSWGDGEYGKLGHGNSATQKYPKIIQGPLFSKIVVSASAGYRHSAAVTKDGELYTWGEGD 548

Query: 298 NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG-YVYTWGKGYCGALG 356
              LGH +     Q R + T  +    V +V+ G  H +A+   G  V+++G G  G LG
Sbjct: 549 FGRLGHSDS----QSRNMPTLVKDISGVGQVACGSSHTIAVAQDGRTVWSFGGGDNGKLG 604

Query: 357 HGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGW---MGFGSLGFPDRG 413
           HGD      P+ + +L   +  +VCA  + +  L   G V+ +G    +G GS       
Sbjct: 605 HGDTNRVYRPKVIEALHGFIIRKVCAGSQSSLALTSAGQVFAWGCGSCLGCGS------- 657

Query: 414 VSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 464
                LRPR ++ L    +  IS G  H + ++    ++ +G+N   Q G 
Sbjct: 658 SETTSLRPRFVEDLSITKIIDISCGDSHCLALSHENEVYAWGNNTMGQCGQ 708



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 88/338 (26%), Positives = 137/338 (40%), Gaps = 49/338 (14%)

Query: 106 IVETSAGNMQITTGRYHTLLISNS--SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAA 163
           +V+  +G  Q+  G  HT+ ++    +V+S G    G LGHG +T +      I      
Sbjct: 565 LVKDISGVGQVACGSSHTIAVAQDGRTVWSFGGGDNGKLGHG-DTNRVYRPKVIEALHGF 623

Query: 164 HVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTA 223
            + +V A    +  +  +GQVF  G  S   CG  +T     RPR VE L       ++ 
Sbjct: 624 IIRKVCAGSQSSLALTSAGQVFAWGCGSCLGCGSSETTS--LRPRFVEDLSITKIIDISC 681

Query: 224 GLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPT-PKSIAPLEEVGSVVQIAAGPSYML 282
           G +    L+    V+  G+NT GQ G G T    T PK +  LE V S+ QI AG S+ L
Sbjct: 682 GDSHCLALSHENEVYAWGNNTMGQCGQGHTSTPITRPKKVLGLEGV-SIQQITAGTSHSL 740

Query: 283 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
           A T                            A+ T R+       V+      V L+ S 
Sbjct: 741 AWT----------------------------AVPTDRQ------LVAWHRPFCVDLEEST 766

Query: 343 YVY--TWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 400
           + Y   + K YC  L      + T P P  S + H    +   K  + V +      G G
Sbjct: 767 FTYLCNFLKCYCDGLE-----NDTPPTPFLSKRDHQQFILLCMKLLS-VHLSLAHAGGTG 820

Query: 401 WMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTG 438
            +  G+ G P R +  +++   + DS++   ++ +S G
Sbjct: 821 ALVLGTQGRPLRNLLFRLIDSNMPDSIQKAVLNTLSIG 858



 Score = 52.8 bits (125), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 43/148 (29%), Positives = 69/148 (46%), Gaps = 9/148 (6%)

Query: 344  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 403
            VY WG G  G L  G   + T+P    SL      QV   +  +F++   G V   G   
Sbjct: 3022 VYLWGNGRYGQLA-GTGTNLTVPTLAPSLSQ--TQQVVCGQNCSFLIQSNGVVTAVGEGQ 3078

Query: 404  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLY---HTVVVTDRGRLFGFGDNERA 460
            +G LG   +G SD +  P I+ + + + V+Q+ T      H++ +T+ G +F +GD +  
Sbjct: 3079 YGRLG---QGNSDDLYVPTIISAFQGYVVTQLVTSCGSDGHSMALTETGEVFSWGDGDFG 3135

Query: 461  QLGHDTLRGCLEPTEIFIQEMEEDTGLA 488
            +LGH        P +I   + E+   LA
Sbjct: 3136 KLGHGNNERQRRPKQIEALQGEDVVQLA 3163



 Score = 39.7 bits (91), Expect = 3.5,   Method: Compositional matrix adjust.
 Identities = 37/125 (29%), Positives = 52/125 (41%), Gaps = 10/125 (8%)

Query: 344 VYTWGKGYCGALGHGDEIDKTLP---EPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 400
           VY WG      L  G      LP   +  S  ++  A Q C     TF +   GSV   G
Sbjct: 383 VYVWGSNSSHQLAEGTLEKILLPKLTQGFSDAQTIEAGQYC-----TFSVSTDGSVKACG 437

Query: 401 WMGFGSLGFPDRGVSDKVLRPRILDSLR-AHHVSQISTGLYHTVVVTDRGRLFGFGDNER 459
              +G LG  D   +  + +  +L+  R    VS       HT+ +T  G +F +GD E 
Sbjct: 438 KGSYGRLGLGDSN-NQSLPKKLVLEPHRNIKKVSSSKGSDGHTLAITVDGEVFSWGDGEY 496

Query: 460 AQLGH 464
            +LGH
Sbjct: 497 GKLGH 501


>gi|48475110|gb|AAT44179.1| putative regulator of chromosome condensation protein [Oryza sativa
           Japonica Group]
 gi|52353417|gb|AAU43985.1| putative regulator of chromosome condensation protein [Oryza sativa
           Japonica Group]
          Length = 1064

 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 91/323 (28%), Positives = 146/323 (45%), Gaps = 20/323 (6%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V Q++    H     + G+VFT G+      GH  T+  I RP+LVE+L     + +  G
Sbjct: 277 VQQIACGSRHIGLTTRQGEVFTWGEELGGRLGH-GTDTDICRPKLVESLAVSNVEYIACG 335

Query: 225 LNFTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSYM 281
              T  +T  G ++  G  ++  G LGHG  +    PK ++ PLE +  V+ +A G  + 
Sbjct: 336 EFHTCVVTASGDLYDWGDGSYNAGLLGHGTGVSHWLPKRVSGPLEGL-QVLSVACGSWHS 394

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL--- 338
                +G +++FG G+   LGHG++     P+ ++     G   ++V+ G  H  A+   
Sbjct: 395 ALTMSSGKLFTFGDGTFGSLGHGDRESVAYPKEVEAL--SGFRAMKVACGVWHSAAIVEI 452

Query: 339 -------DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 391
                    S  ++TWG G    LGHGD+  K +P  + +L  H   QV      T  L 
Sbjct: 453 SGQASTNAMSRKLFTWGDGDKNRLGHGDKEAKLVPTCVQALVDHNFHQVACGHSMTVALA 512

Query: 392 DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRL 451
            +G V+  G    G LG P    +D      + D L    V +IS G  H   +T R  +
Sbjct: 513 TSGHVFTMGSSNNGQLGNPK---ADGKQPCMVQDKLGNELVEEISCGSNHVAALTSRSEV 569

Query: 452 FGFGDNERAQLGHDTLRGCLEPT 474
           + +G     +LGH ++    +PT
Sbjct: 570 YTWGMGANGRLGHGSVEDKKKPT 592



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 87/273 (31%), Positives = 131/273 (47%), Gaps = 21/273 (7%)

Query: 116 ITTGRYHTLLISNSSV---FSCGSSLCGVLGHGPETTQCVSFTRINFP-SAAHVVQVSAS 171
           I  G +HT +++ S     +  GS   G+LGHG   +  +   R++ P     V+ V+  
Sbjct: 332 IACGEFHTCVVTASGDLYDWGDGSYNAGLLGHGTGVSHWLP-KRVSGPLEGLQVLSVACG 390

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL-NFTGF 230
             H+A  + SG++FT GD +    GH D    +  P+ VEAL G    +V  G+ +    
Sbjct: 391 SWHSALTMSSGKLFTFGDGTFGSLGHGD-RESVAYPKEVEALSGFRAMKVACGVWHSAAI 449

Query: 231 LTIRGH---------VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 281
           + I G          + T G     +LGHGD   +  P  +  L +  +  Q+A G S  
Sbjct: 450 VEISGQASTNAMSRKLFTWGDGDKNRLGHGDKEAKLVPTCVQALVD-HNFHQVACGHSMT 508

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVR-VSAGDEHVVALDS 340
           +A+  +G V++ GS +N  LG+  + D  QP  +Q   + G  +V  +S G  HV AL S
Sbjct: 509 VALATSGHVFTMGSSNNGQLGN-PKADGKQPCMVQD--KLGNELVEEISCGSNHVAALTS 565

Query: 341 SGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
              VYTWG G  G LGHG   DK  P  + +LK
Sbjct: 566 RSEVYTWGMGANGRLGHGSVEDKKKPTLVDALK 598



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 91/344 (26%), Positives = 141/344 (40%), Gaps = 20/344 (5%)

Query: 115 QITTGRYHT-LLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
           QI  G  H  L      VF+ G  L G LGHG +T  C     +   + ++V  ++  E 
Sbjct: 279 QIACGSRHIGLTTRQGEVFTWGEELGGRLGHGTDTDICRP-KLVESLAVSNVEYIACGEF 337

Query: 174 HAAFVLQSGQVFTCGDNS--SFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
           H   V  SG ++  GD S  +   GH          R+   L+G+    V  G   +   
Sbjct: 338 HTCVVTASGDLYDWGDGSYNAGLLGHGTGVSHWLPKRVSGPLEGLQVLSVACGSWHSALT 397

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAG---PSYMLAVTGNG 288
              G + T G  T G LGHGD      PK +  L      +++A G    + ++ ++G  
Sbjct: 398 MSSGKLFTFGDGTFGSLGHGDRESVAYPKEVEALSGF-RAMKVACGVWHSAAIVEISGQA 456

Query: 289 V-------VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 341
                   ++++G G    LGHG++  +L P  +Q       H  +V+ G    VAL +S
Sbjct: 457 STNAMSRKLFTWGDGDKNRLGHGDKEAKLVPTCVQALVDHNFH--QVACGHSMTVALATS 514

Query: 342 GYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGW 401
           G+V+T G    G LG+     K        L + L  ++         L     VY +G 
Sbjct: 515 GHVFTMGSSNNGQLGNPKADGKQPCMVQDKLGNELVEEISCGSNHVAALTSRSEVYTWGM 574

Query: 402 MGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVV 445
              G LG    G  +   +P ++D+L+  HV  IS G   T  +
Sbjct: 575 GANGRLG---HGSVEDKKKPTLVDALKDRHVKSISCGSNFTTCI 615



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 86/314 (27%), Positives = 139/314 (44%), Gaps = 20/314 (6%)

Query: 183 QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 242
           +V     +S++ C   D       P+ +E+   +  +Q+  G    G  T +G V T G 
Sbjct: 246 EVLPSEGSSNYLCSKTD----FLIPKPLESDVVLDVQQIACGSRHIGLTTRQGEVFTWGE 301

Query: 243 NTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC-- 300
              G+LGHG   D   PK +  L  V +V  IA G  +   VT +G +Y +G GS     
Sbjct: 302 ELGGRLGHGTDTDICRPKLVESL-AVSNVEYIACGEFHTCVVTASGDLYDWGDGSYNAGL 360

Query: 301 LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 360
           LGHG       P+ + +   +G+ V+ V+ G  H     SSG ++T+G G  G+LGHGD 
Sbjct: 361 LGHGTGVSHWLPKRV-SGPLEGLQVLSVACGSWHSALTMSSGKLFTFGDGTFGSLGHGDR 419

Query: 361 IDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG--------SVYGFGWMGFGSLGFPDR 412
                P+ + +L    A++V      +  +V+          S   F W G G       
Sbjct: 420 ESVAYPKEVEALSGFRAMKVACGVWHSAAIVEISGQASTNAMSRKLFTW-GDGDKNRLGH 478

Query: 413 GVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH---DTLRG 469
           G  +  L P  + +L  H+  Q++ G   TV +   G +F  G +   QLG+   D  + 
Sbjct: 479 GDKEAKLVPTCVQALVDHNFHQVACGHSMTVALATSGHVFTMGSSNNGQLGNPKADGKQP 538

Query: 470 CLEPTEIFIQEMEE 483
           C+   ++  + +EE
Sbjct: 539 CMVQDKLGNELVEE 552



 Score = 62.8 bits (151), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 55/202 (27%), Positives = 88/202 (43%), Gaps = 10/202 (4%)

Query: 277 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVV 336
           G  Y+       V+ S GS +  C     + D L P+ +++     + V +++ G  H+ 
Sbjct: 235 GDVYVWGEVWTEVLPSEGSSNYLC----SKTDFLIPKPLES--DVVLDVQQIACGSRHIG 288

Query: 337 ALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSV 396
                G V+TWG+   G LGHG + D   P+ + SL       +   +  T V+  +G +
Sbjct: 289 LTTRQGEVFTWGEELGGRLGHGTDTDICRPKLVESLAVSNVEYIACGEFHTCVVTASGDL 348

Query: 397 YGFGWMGF--GSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 454
           Y +G   +  G LG    GVS   L  R+   L    V  ++ G +H+ +    G+LF F
Sbjct: 349 YDWGDGSYNAGLLGH-GTGVS-HWLPKRVSGPLEGLQVLSVACGSWHSALTMSSGKLFTF 406

Query: 455 GDNERAQLGHDTLRGCLEPTEI 476
           GD     LGH        P E+
Sbjct: 407 GDGTFGSLGHGDRESVAYPKEV 428


>gi|218197208|gb|EEC79635.1| hypothetical protein OsI_20852 [Oryza sativa Indica Group]
          Length = 1038

 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 91/323 (28%), Positives = 146/323 (45%), Gaps = 20/323 (6%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V Q++    H     + G+VFT G+      GH  T+  I RP+LVE+L     + +  G
Sbjct: 263 VQQIACGSRHIGLTTRQGEVFTWGEELGGRLGH-GTDTDICRPKLVESLAVSNVEYIACG 321

Query: 225 LNFTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSYM 281
              T  +T  G ++  G  ++  G LGHG  +    PK ++ PLE +  V+ +A G  + 
Sbjct: 322 EFHTCVVTASGDLYDWGDGSYNAGLLGHGTGVSHWLPKRVSGPLEGL-QVLSVACGSWHS 380

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL--- 338
                +G +++FG G+   LGHG++     P+ ++     G   ++V+ G  H  A+   
Sbjct: 381 ALTMSSGKLFTFGDGTFGSLGHGDRESVAYPKEVEAL--SGFRAMKVACGVWHSAAIVEI 438

Query: 339 -------DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 391
                    S  ++TWG G    LGHGD+  K +P  + +L  H   QV      T  L 
Sbjct: 439 SGQASTNAMSRKLFTWGDGDKNRLGHGDKEAKLVPTCVQALVDHNFHQVACGHSMTVALA 498

Query: 392 DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRL 451
            +G V+  G    G LG P    +D      + D L    V +IS G  H   +T R  +
Sbjct: 499 TSGHVFTMGSSNNGQLGNPK---ADGKQPCMVQDKLGNELVEEISCGSNHVAALTSRSEV 555

Query: 452 FGFGDNERAQLGHDTLRGCLEPT 474
           + +G     +LGH ++    +PT
Sbjct: 556 YTWGMGANGRLGHGSVEDKKKPT 578



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 87/273 (31%), Positives = 131/273 (47%), Gaps = 21/273 (7%)

Query: 116 ITTGRYHTLLISNSSV---FSCGSSLCGVLGHGPETTQCVSFTRINFP-SAAHVVQVSAS 171
           I  G +HT +++ S     +  GS   G+LGHG   +  +   R++ P     V+ V+  
Sbjct: 318 IACGEFHTCVVTASGDLYDWGDGSYNAGLLGHGTGVSHWLP-KRVSGPLEGLQVLSVACG 376

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL-NFTGF 230
             H+A  + SG++FT GD +    GH D    +  P+ VEAL G    +V  G+ +    
Sbjct: 377 SWHSALTMSSGKLFTFGDGTFGSLGHGD-RESVAYPKEVEALSGFRAMKVACGVWHSAAI 435

Query: 231 LTIRGH---------VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 281
           + I G          + T G     +LGHGD   +  P  +  L +  +  Q+A G S  
Sbjct: 436 VEISGQASTNAMSRKLFTWGDGDKNRLGHGDKEAKLVPTCVQALVD-HNFHQVACGHSMT 494

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVR-VSAGDEHVVALDS 340
           +A+  +G V++ GS +N  LG+  + D  QP  +Q   + G  +V  +S G  HV AL S
Sbjct: 495 VALATSGHVFTMGSSNNGQLGN-PKADGKQPCMVQD--KLGNELVEEISCGSNHVAALTS 551

Query: 341 SGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
              VYTWG G  G LGHG   DK  P  + +LK
Sbjct: 552 RSEVYTWGMGANGRLGHGSVEDKKKPTLVDALK 584



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 91/344 (26%), Positives = 141/344 (40%), Gaps = 20/344 (5%)

Query: 115 QITTGRYHT-LLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
           QI  G  H  L      VF+ G  L G LGHG +T  C     +   + ++V  ++  E 
Sbjct: 265 QIACGSRHIGLTTRQGEVFTWGEELGGRLGHGTDTDICRP-KLVESLAVSNVEYIACGEF 323

Query: 174 HAAFVLQSGQVFTCGDNS--SFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
           H   V  SG ++  GD S  +   GH          R+   L+G+    V  G   +   
Sbjct: 324 HTCVVTASGDLYDWGDGSYNAGLLGHGTGVSHWLPKRVSGPLEGLQVLSVACGSWHSALT 383

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAG---PSYMLAVTGNG 288
              G + T G  T G LGHGD      PK +  L      +++A G    + ++ ++G  
Sbjct: 384 MSSGKLFTFGDGTFGSLGHGDRESVAYPKEVEALSGF-RAMKVACGVWHSAAIVEISGQA 442

Query: 289 V-------VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 341
                   ++++G G    LGHG++  +L P  +Q       H  +V+ G    VAL +S
Sbjct: 443 STNAMSRKLFTWGDGDKNRLGHGDKEAKLVPTCVQALVDHNFH--QVACGHSMTVALATS 500

Query: 342 GYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGW 401
           G+V+T G    G LG+     K        L + L  ++         L     VY +G 
Sbjct: 501 GHVFTMGSSNNGQLGNPKADGKQPCMVQDKLGNELVEEISCGSNHVAALTSRSEVYTWGM 560

Query: 402 MGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVV 445
              G LG    G  +   +P ++D+L+  HV  IS G   T  +
Sbjct: 561 GANGRLG---HGSVEDKKKPTLVDALKDRHVKSISCGSNFTTCI 601



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 86/314 (27%), Positives = 139/314 (44%), Gaps = 20/314 (6%)

Query: 183 QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 242
           +V     +S++ C   D       P+ +E+   +  +Q+  G    G  T +G V T G 
Sbjct: 232 EVLPSEGSSNYLCSKTD----FLIPKPLESDVVLDVQQIACGSRHIGLTTRQGEVFTWGE 287

Query: 243 NTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC-- 300
              G+LGHG   D   PK +  L  V +V  IA G  +   VT +G +Y +G GS     
Sbjct: 288 ELGGRLGHGTDTDICRPKLVESL-AVSNVEYIACGEFHTCVVTASGDLYDWGDGSYNAGL 346

Query: 301 LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 360
           LGHG       P+ + +   +G+ V+ V+ G  H     SSG ++T+G G  G+LGHGD 
Sbjct: 347 LGHGTGVSHWLPKRV-SGPLEGLQVLSVACGSWHSALTMSSGKLFTFGDGTFGSLGHGDR 405

Query: 361 IDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG--------SVYGFGWMGFGSLGFPDR 412
                P+ + +L    A++V      +  +V+          S   F W G G       
Sbjct: 406 ESVAYPKEVEALSGFRAMKVACGVWHSAAIVEISGQASTNAMSRKLFTW-GDGDKNRLGH 464

Query: 413 GVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH---DTLRG 469
           G  +  L P  + +L  H+  Q++ G   TV +   G +F  G +   QLG+   D  + 
Sbjct: 465 GDKEAKLVPTCVQALVDHNFHQVACGHSMTVALATSGHVFTMGSSNNGQLGNPKADGKQP 524

Query: 470 CLEPTEIFIQEMEE 483
           C+   ++  + +EE
Sbjct: 525 CMVQDKLGNELVEE 538



 Score = 62.8 bits (151), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 55/202 (27%), Positives = 88/202 (43%), Gaps = 10/202 (4%)

Query: 277 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVV 336
           G  Y+       V+ S GS +  C     + D L P+ +++     + V +++ G  H+ 
Sbjct: 221 GDVYVWGEVWTEVLPSEGSSNYLC----SKTDFLIPKPLES--DVVLDVQQIACGSRHIG 274

Query: 337 ALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSV 396
                G V+TWG+   G LGHG + D   P+ + SL       +   +  T V+  +G +
Sbjct: 275 LTTRQGEVFTWGEELGGRLGHGTDTDICRPKLVESLAVSNVEYIACGEFHTCVVTASGDL 334

Query: 397 YGFGWMGF--GSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 454
           Y +G   +  G LG    GVS   L  R+   L    V  ++ G +H+ +    G+LF F
Sbjct: 335 YDWGDGSYNAGLLGH-GTGVS-HWLPKRVSGPLEGLQVLSVACGSWHSALTMSSGKLFTF 392

Query: 455 GDNERAQLGHDTLRGCLEPTEI 476
           GD     LGH        P E+
Sbjct: 393 GDGTFGSLGHGDRESVAYPKEV 414


>gi|47226892|emb|CAG05784.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 557

 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 79/255 (30%), Positives = 124/255 (48%), Gaps = 11/255 (4%)

Query: 230 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSV-VQIAAGPSYMLAVTGNG 288
           ++T    V+  G N    LG GD+     PK +  L     V +   +GP  +LA T +G
Sbjct: 51  YITADDEVYALGLNCSNCLGTGDSQSSIVPKKVDILSGRKVVSLSYGSGPHILLA-TEDG 109

Query: 289 VVYSFGSGSNFCLGHGEQHDELQPRAIQT--FRRKGIHVVRVSAGDEHVVALDSSGYVYT 346
            ++++G      LG+G  +  + P  +      +K   V  V+ G  H +AL  SG VY 
Sbjct: 110 ELFAWGHNGYSQLGNGTTNQGVAPVLVSANLLNKK---VTEVACGSHHSMALTDSGEVYA 166

Query: 347 WGKGYCGALGHGDEIDKTLPEPLSS-LKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFG 405
           WG   CG +G G   ++  P  +SS L++ +AV +   +  +  +VD G VYG+G+ G G
Sbjct: 167 WGYNNCGQVGSGSTANQPTPRRVSSCLQNRVAVSIVCGQTSSLAVVDNGEVYGWGYNGNG 226

Query: 406 SLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHD 465
            LG  + G     L P  L +L+   V QI +G  H++ +TD G L+ +G N   QLG  
Sbjct: 227 QLGLGNNG---NQLTPCRLVALQGLCVQQIVSGYAHSLALTDEGLLYAWGANTYGQLGTG 283

Query: 466 TLRGCLEPTEIFIQE 480
                L P +I  ++
Sbjct: 284 NKSNQLSPVQIMTEK 298



 Score = 98.6 bits (244), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 79/287 (27%), Positives = 131/287 (45%), Gaps = 7/287 (2%)

Query: 117 TTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS-ASENHA 175
           T+      + ++  V++ G +    LG G   +  V   +++  S   VV +S  S  H 
Sbjct: 44  TSANEAIYITADDEVYALGLNCSNCLGTGDSQSSIVP-KKVDILSGRKVVSLSYGSGPHI 102

Query: 176 AFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEA-LKGVPCKQVTAGLNFTGFLTIR 234
               + G++F  G N     G+  TN+ +  P LV A L      +V  G + +  LT  
Sbjct: 103 LLATEDGELFAWGHNGYSQLGNGTTNQGV-APVLVSANLLNKKVTEVACGSHHSMALTDS 161

Query: 235 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 294
           G V+  G N  GQ+G G T ++PTP+ ++   +    V I  G +  LAV  NG VY +G
Sbjct: 162 GEVYAWGYNNCGQVGSGSTANQPTPRRVSSCLQNRVAVSIVCGQTSSLAVVDNGEVYGWG 221

Query: 295 SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGA 354
              N  LG G   ++L P  +     +G+ V ++ +G  H +AL   G +Y WG    G 
Sbjct: 222 YNGNGQLGLGNNGNQLTPCRLVAL--QGLCVQQIVSGYAHSLALTDEGLLYAWGANTYGQ 279

Query: 355 LGHGDEIDKTLPEPLSSLKSHLA-VQVCARKRKTFVLVDTGSVYGFG 400
           LG G++ ++  P  + + K  +  +  C     +     +G VY +G
Sbjct: 280 LGTGNKSNQLSPVQIMTEKERIVEIAACHSTHTSAAKTQSGQVYMWG 326


>gi|38346811|emb|CAD41378.2| OSJNBa0088A01.18 [Oryza sativa Japonica Group]
 gi|125591414|gb|EAZ31764.1| hypothetical protein OsJ_15916 [Oryza sativa Japonica Group]
          Length = 1041

 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 96/314 (30%), Positives = 148/314 (47%), Gaps = 24/314 (7%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRD--TNRPIFRPRLVEALKGVPCKQVT 222
           V  ++  ENHAA + + G+V+T G  SS   G  D   N     P++VE+L  V  K V 
Sbjct: 264 VQSIACGENHAAIITKQGEVYTWGSYSS---GRLDQKVNVNASCPKMVESLASVHVKAVA 320

Query: 223 AGLNFTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTP-KSIAPLEEVGSVVQIAAGPS 279
            G   T  +T+ G +   G   H  G +      ++  P K + P++ + SV +IA G  
Sbjct: 321 FGSKHTCAITVSGELFEWGEGAHSLGLMNDWYGRNQWFPHKFLGPMDNI-SVSKIACGEW 379

Query: 280 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL- 338
           +   +T +G ++++G G+   LGHG+     +P+ +++   KG  V  V+ G  H  A+ 
Sbjct: 380 HTAIITSSGQLFTYGDGTFGVLGHGDTQGVARPKEVESL--KGSRVKSVACGPWHTAAIV 437

Query: 339 ---------DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFV 389
                      SG ++TWG    G LGH D   K LP  + SL ++  +QV      T V
Sbjct: 438 EVMSSFKGNAPSGKLFTWGDADRGKLGHADRKMKLLPTCVDSLTAYDLIQVSCGTAVTVV 497

Query: 390 LVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRG 449
           L  TG V+  G    G LG P    +D      +   L+   V +IS+G  H  V+T  G
Sbjct: 498 LTVTGMVFTIGSSRHGQLGNPK---ADGESICSVEGPLKTEFVREISSGSSHVAVLTMSG 554

Query: 450 RLFGFGDNERAQLG 463
           ++F +G     QLG
Sbjct: 555 KVFTWGKGAEGQLG 568



 Score = 96.3 bits (238), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 83/285 (29%), Positives = 129/285 (45%), Gaps = 29/285 (10%)

Query: 203 PIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSI 262
           P   PRLV + K +  + +  G N    +T +G V+T GS + G+L     ++   PK +
Sbjct: 249 PKSLPRLVGSAKMLDVQSIACGENHAAIITKQGEVYTWGSYSSGRLDQKVNVNASCPKMV 308

Query: 263 APLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS------NFCLGHGEQ--HDELQPRA 314
             L  V  V  +A G  +  A+T +G ++ +G G+      N   G  +   H  L P  
Sbjct: 309 ESLASV-HVKAVAFGSKHTCAITVSGELFEWGEGAHSLGLMNDWYGRNQWFPHKFLGPM- 366

Query: 315 IQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKS 374
                   I V +++ G+ H   + SSG ++T+G G  G LGHGD      P+ + SLK 
Sbjct: 367 ------DNISVSKIACGEWHTAIITSSGQLFTYGDGTFGVLGHGDTQGVARPKEVESLKG 420

Query: 375 HLAVQVCARKRKTFVLVD----------TGSVYGFGWMGFGSLGFPDRGVSDKVLRPRIL 424
                V      T  +V+          +G ++ +G    G LG  DR +    L P  +
Sbjct: 421 SRVKSVACGPWHTAAIVEVMSSFKGNAPSGKLFTWGDADRGKLGHADRKMK---LLPTCV 477

Query: 425 DSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG 469
           DSL A+ + Q+S G   TVV+T  G +F  G +   QLG+    G
Sbjct: 478 DSLTAYDLIQVSCGTAVTVVLTVTGMVFTIGSSRHGQLGNPKADG 522



 Score = 86.3 bits (212), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 69/221 (31%), Positives = 108/221 (48%), Gaps = 18/221 (8%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V +++  E H A +  SGQ+FT GD +    GH DT + + RP+ VE+LKG   K V  G
Sbjct: 371 VSKIACGEWHTAIITSSGQLFTYGDGTFGVLGHGDT-QGVARPKEVESLKGSRVKSVACG 429

Query: 225 LNFTGFL----------TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQI 274
              T  +             G + T G    G+LGH D   +  P  +  L     ++Q+
Sbjct: 430 PWHTAAIVEVMSSFKGNAPSGKLFTWGDADRGKLGHADRKMKLLPTCVDSLTAY-DLIQV 488

Query: 275 AAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFR--RKGIHVVRVSAGD 332
           + G +  + +T  G+V++ GS  +  LG+ +   E    +I +     K   V  +S+G 
Sbjct: 489 SCGTAVTVVLTVTGMVFTIGSSRHGQLGNPKADGE----SICSVEGPLKTEFVREISSGS 544

Query: 333 EHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
            HV  L  SG V+TWGKG  G LG GD  +++ P  + +L+
Sbjct: 545 SHVAVLTMSGKVFTWGKGAEGQLGLGDYSNRSSPTLVEALE 585



 Score = 79.7 bits (195), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 63/234 (26%), Positives = 112/234 (47%), Gaps = 25/234 (10%)

Query: 259 PKSIAPLEEVGS-----VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPR 313
           PKS+  L  VGS     V  IA G ++   +T  G VY++GS S+  L      +   P+
Sbjct: 249 PKSLPRL--VGSAKMLDVQSIACGENHAAIITKQGEVYTWGSYSSGRLDQKVNVNASCPK 306

Query: 314 AIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY--CGALGHGDEIDKTLPEPLSS 371
            +++     +HV  V+ G +H  A+  SG ++ WG+G    G +      ++  P     
Sbjct: 307 MVESL--ASVHVKAVAFGSKHTCAITVSGELFEWGEGAHSLGLMNDWYGRNQWFPHKFLG 364

Query: 372 LKSHLAV-QVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAH 430
              +++V ++   +  T ++  +G ++ +G   FG LG  D   +  V RP+ ++SL+  
Sbjct: 365 PMDNISVSKIACGEWHTAIITSSGQLFTYGDGTFGVLGHGD---TQGVARPKEVESLKGS 421

Query: 431 HVSQISTGLYHTVVVTD----------RGRLFGFGDNERAQLGHDTLRGCLEPT 474
            V  ++ G +HT  + +           G+LF +GD +R +LGH   +  L PT
Sbjct: 422 RVKSVACGPWHTAAIVEVMSSFKGNAPSGKLFTWGDADRGKLGHADRKMKLLPT 475



 Score = 72.0 bits (175), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 80/344 (23%), Positives = 138/344 (40%), Gaps = 22/344 (6%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           I  G  H  +I+    V++ GS   G L              +   ++ HV  V+    H
Sbjct: 267 IACGENHAAIITKQGEVYTWGSYSSGRLDQKVNVNASCP-KMVESLASVHVKAVAFGSKH 325

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDT--NRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
              +  SG++F  G+ +       D       F  + +  +  +   ++  G   T  +T
Sbjct: 326 TCAITVSGELFEWGEGAHSLGLMNDWYGRNQWFPHKFLGPMDNISVSKIACGEWHTAIIT 385

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ-IAAGPSYMLAVT------ 285
             G + T G  T G LGHGDT     PK +  L+  GS V+ +A GP +  A+       
Sbjct: 386 SSGQLFTYGDGTFGVLGHGDTQGVARPKEVESLK--GSRVKSVACGPWHTAAIVEVMSSF 443

Query: 286 -GN---GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 341
            GN   G ++++G      LGH ++  +L P  + +       +++VS G    V L  +
Sbjct: 444 KGNAPSGKLFTWGDADRGKLGHADRKMKLLPTCVDSL--TAYDLIQVSCGTAVTVVLTVT 501

Query: 342 GYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGW 401
           G V+T G    G LG+     +++      LK+    ++ +      VL  +G V+ +G 
Sbjct: 502 GMVFTIGSSRHGQLGNPKADGESICSVEGPLKTEFVREISSGSSHVAVLTMSGKVFTWGK 561

Query: 402 MGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVV 445
              G LG  D         P ++++L    V  +  G   T  +
Sbjct: 562 GAEGQLGLGDYSNRSS---PTLVEALEGRDVESVVCGFNFTAAI 602



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 44/157 (28%), Positives = 72/157 (45%), Gaps = 2/157 (1%)

Query: 321 KGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQV 380
           K + V  ++ G+ H   +   G VYTWG    G L     ++ + P+ + SL S     V
Sbjct: 260 KMLDVQSIACGENHAAIITKQGEVYTWGSYSSGRLDQKVNVNASCPKMVESLASVHVKAV 319

Query: 381 CARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRP-RILDSLRAHHVSQISTGL 439
               + T  +  +G ++ +G  G  SLG  +         P + L  +    VS+I+ G 
Sbjct: 320 AFGSKHTCAITVSGELFEWG-EGAHSLGLMNDWYGRNQWFPHKFLGPMDNISVSKIACGE 378

Query: 440 YHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 476
           +HT ++T  G+LF +GD     LGH   +G   P E+
Sbjct: 379 WHTAIITSSGQLFTYGDGTFGVLGHGDTQGVARPKEV 415



 Score = 42.7 bits (99), Expect = 0.46,   Method: Compositional matrix adjust.
 Identities = 36/105 (34%), Positives = 52/105 (49%), Gaps = 6/105 (5%)

Query: 131 VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVV-QVSASENHAAFVLQSGQVFTCGD 189
           VF+ GSS  G LG+     +  S   +  P     V ++S+  +H A +  SG+VFT G 
Sbjct: 504 VFTIGSSRHGQLGNPKADGE--SICSVEGPLKTEFVREISSGSSHVAVLTMSGKVFTWGK 561

Query: 190 NSSFCCGHRD-TNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
            +    G  D +NR    P LVEAL+G   + V  G NFT  + +
Sbjct: 562 GAEGQLGLGDYSNRS--SPTLVEALEGRDVESVVCGFNFTAAICL 604


>gi|443293653|ref|ZP_21032747.1| Regulator of chromosome condensation, RCC1 [Micromonospora lupini
           str. Lupac 08]
 gi|385883511|emb|CCH20898.1| Regulator of chromosome condensation, RCC1 [Micromonospora lupini
           str. Lupac 08]
          Length = 710

 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 96/344 (27%), Positives = 159/344 (46%), Gaps = 33/344 (9%)

Query: 115 QITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPET---TQCVSF--TRINFPSAAHVVQV 168
            +  G  H+L L S  +V + G++  GVLG+G +T    Q  S+    ++ P+   V  V
Sbjct: 102 DVAAGAVHSLALTSTGTVLAWGTNYYGVLGNGTKTDNSAQNDSYVPAAVHLPAGTTVTSV 161

Query: 169 SASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFT 228
           +AS  ++  +  +G V   G+N     G+  TN   + P  +          + A  N  
Sbjct: 162 AASSTYSLALTATGTVLAWGNNDQGQLGN-GTNTDSYLPVPLALPAATTITAIAAATNHG 220

Query: 229 GFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG 288
             LT  G V   GSN  GQLG+G+T +  TP ++A L    ++  IAA  S+ +A+T  G
Sbjct: 221 LALTSNGTVLAWGSNGSGQLGNGNTTNSNTPVTVA-LPAGTTITAIAAAGSHSMALTSTG 279

Query: 289 VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 348
            V ++G             D + P  I      GI +  V++G++H +AL S+G V+TWG
Sbjct: 280 TVLTWG------------QDTVLP--IPIVFPAGITITAVASGNDHSLALTSTGKVFTWG 325

Query: 349 KGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLG 408
             Y G+LG+G   + ++P P S         +     ++  L  TG +  +G   +G +G
Sbjct: 326 ANYFGSLGNGTFANSSVPVPASVPTDTTITAIAGGNAQSLALTSTGKLLAWGRNNYGQVG 385

Query: 409 -------FPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVV 445
                  +P  GVS  V      D+     ++ ++ G YH++ V
Sbjct: 386 NGTRTGSWPGMGVSVPVPVSLAADT----KITTMAGGYYHSLAV 425



 Score = 92.4 bits (228), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 92/340 (27%), Positives = 142/340 (41%), Gaps = 30/340 (8%)

Query: 140 GVLGHGPET-TQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGH- 197
           G LG G  T    +S  R++ P+   +  V+A   H+  +  +G V   G N     G+ 
Sbjct: 74  GALGVGTATLDDKLSPVRVHLPTGTTISDVAAGAVHSLALTSTGTVLAWGTNYYGVLGNG 133

Query: 198 ----RDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDT 253
                      + P  V    G     V A   ++  LT  G V   G+N  GQLG+G  
Sbjct: 134 TKTDNSAQNDSYVPAAVHLPAGTTVTSVAASSTYSLALTATGTVLAWGNNDQGQLGNGTN 193

Query: 254 LDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPR 313
            D   P  +A L    ++  IAA  ++ LA+T NG V ++GS  +  LG+G   +   P 
Sbjct: 194 TDSYLPVPLA-LPAATTITAIAAATNHGLALTSNGTVLAWGSNGSGQLGNGNTTNSNTP- 251

Query: 314 AIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
            +      G  +  ++A   H +AL S+G V TWG+            D  LP P+    
Sbjct: 252 -VTVALPAGTTITAIAAAGSHSMALTSTGTVLTWGQ------------DTVLPIPIVFPA 298

Query: 374 SHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLG---FPDRGVSDKVLRPRILDSLRAH 430
                 V +    +  L  TG V+ +G   FGSLG   F +  V      P   D+    
Sbjct: 299 GITITAVASGNDHSLALTSTGKVFTWGANYFGSLGNGTFANSSVPVPASVPT--DT---- 352

Query: 431 HVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGC 470
            ++ I+ G   ++ +T  G+L  +G N   Q+G+ T  G 
Sbjct: 353 TITAIAGGNAQSLALTSTGKLLAWGRNNYGQVGNGTRTGS 392



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 72/289 (24%), Positives = 114/289 (39%), Gaps = 22/289 (7%)

Query: 205 FRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPK-SIA 263
             P  V    G     V AG   +  LT  G V   G+N +G LG+G   D      S  
Sbjct: 87  LSPVRVHLPTGTTISDVAAGAVHSLALTSTGTVLAWGTNYYGVLGNGTKTDNSAQNDSYV 146

Query: 264 P----LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFR 319
           P    L    +V  +AA  +Y LA+T  G V ++G+     LG+G   D   P  +    
Sbjct: 147 PAAVHLPAGTTVTSVAASSTYSLALTATGTVLAWGNNDQGQLGNGTNTDSYLP--VPLAL 204

Query: 320 RKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQ 379
                +  ++A   H +AL S+G V  WG    G LG+G+  +   P  ++         
Sbjct: 205 PAATTITAIAAATNHGLALTSNGTVLAWGSNGSGQLGNGNTTNSNTPVTVALPAGTTITA 264

Query: 380 VCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGL 439
           + A    +  L  TG+V  +G               D VL P  +       ++ +++G 
Sbjct: 265 IAAAGSHSMALTSTGTVLTWG--------------QDTVL-PIPIVFPAGITITAVASGN 309

Query: 440 YHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQEMEEDTGLA 488
            H++ +T  G++F +G N    LG+ T      P    +      T +A
Sbjct: 310 DHSLALTSTGKVFTWGANYFGSLGNGTFANSSVPVPASVPTDTTITAIA 358



 Score = 58.9 bits (141), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 58/231 (25%), Positives = 89/231 (38%), Gaps = 13/231 (5%)

Query: 264 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGI 323
           PL  +      A  PS   A TG G+ +         +G     D+L P  ++     G 
Sbjct: 43  PLPTLAQHAAAATPPSG--AATGIGLAWGRDGYGALGVGTATLDDKLSP--VRVHLPTGT 98

Query: 324 HVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKT------LPEPLSSLKSHLA 377
            +  V+AG  H +AL S+G V  WG  Y G LG+G + D +      +P  +        
Sbjct: 99  TISDVAAGAVHSLALTSTGTVLAWGTNYYGVLGNGTKTDNSAQNDSYVPAAVHLPAGTTV 158

Query: 378 VQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIST 437
             V A    +  L  TG+V  +G    G LG    G +     P  L    A  ++ I+ 
Sbjct: 159 TSVAASSTYSLALTATGTVLAWGNNDQGQLG---NGTNTDSYLPVPLALPAATTITAIAA 215

Query: 438 GLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQEMEEDTGLA 488
              H + +T  G +  +G N   QLG+        P  + +      T +A
Sbjct: 216 ATNHGLALTSNGTVLAWGSNGSGQLGNGNTTNSNTPVTVALPAGTTITAIA 266


>gi|408681154|ref|YP_006880981.1| RCC1 repeat domain protein [Streptomyces venezuelae ATCC 10712]
 gi|328885483|emb|CCA58722.1| RCC1 repeat domain protein [Streptomyces venezuelae ATCC 10712]
          Length = 394

 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 95/289 (32%), Positives = 139/289 (48%), Gaps = 20/289 (6%)

Query: 178 VLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRG-H 236
           +L+ G V + G+N++   G+  T    F P  V AL GV   +V+AGLN    L ++G  
Sbjct: 90  LLKDGTVKSWGNNTTGQLGNGTTTAQPF-PATVAALSGV--SEVSAGLNHA--LAVKGGR 144

Query: 237 VHTCGSNTHGQLGHGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 295
           V   G+N   QLG G   D  TP K+  P++ +  V  + AG  + +A+  +G V+++G 
Sbjct: 145 VLAWGNNASKQLGTGQ--DTTTPYKAPIPVQSLDKVKDVGAGCDFSVALRQDGTVWTWGK 202

Query: 296 GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGAL 355
           G N  LG G       P+ +         V  V+ G EHV+AL + G V  WGKG  G L
Sbjct: 203 GDNGRLGTGNNTTRETPQKVPDL----ADVESVAVGCEHVLALTADGVVKAWGKGAEGQL 258

Query: 356 GHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVS 415
           G+    D + P  ++ L +     V A     F ++D GSV G+G      LG    G +
Sbjct: 259 GNDSTADSSRPVDVAHLDA--VATVFATSASGFAVLDDGSVAGWGKNAERQLG---DGTN 313

Query: 416 DKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 464
                P +LD L+   V  I+ G   T+   D G + G+G N  AQLG 
Sbjct: 314 ANRTTPVVLDHLKG--VQSIAGGADFTLAALDDGSVIGWGANAAAQLGD 360



 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 74/253 (29%), Positives = 104/253 (41%), Gaps = 21/253 (8%)

Query: 111 AGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSA 170
           +G  +++ G  H L +    V + G++    LG G +TT       I   S   V  V A
Sbjct: 125 SGVSEVSAGLNHALAVKGGRVLAWGNNASKQLGTGQDTTTPYK-APIPVQSLDKVKDVGA 183

Query: 171 SENHAAFVLQSGQVFTC--GDNSSFCCGHRDTNR-PIFRPRL--VEALKGVPCKQVTAGL 225
             + +  + Q G V+T   GDN     G+  T   P   P L  VE++  V C+ V A  
Sbjct: 184 GCDFSVALRQDGTVWTWGKGDNGRLGTGNNTTRETPQKVPDLADVESVA-VGCEHVLA-- 240

Query: 226 NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 285
                LT  G V   G    GQLG+  T D   P  +A L+ V +V   +A      AV 
Sbjct: 241 -----LTADGVVKAWGKGAEGQLGNDSTADSSRPVDVAHLDAVATVFATSA---SGFAVL 292

Query: 286 GNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVY 345
            +G V  +G  +   LG G   +   P  +     KG+  +   A D  + ALD  G V 
Sbjct: 293 DDGSVAGWGKNAERQLGDGTNANRTTPVVLDHL--KGVQSIAGGA-DFTLAALD-DGSVI 348

Query: 346 TWGKGYCGALGHG 358
            WG      LG G
Sbjct: 349 GWGANAAAQLGDG 361



 Score = 55.8 bits (133), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 65/250 (26%), Positives = 100/250 (40%), Gaps = 23/250 (9%)

Query: 237 VHTCGSNTHGQLGHGDTLDRPTPKSIAPLE-------EVGSVVQIAAGPSYMLAVTGNGV 289
           V   G N  GQLG+G TL + TP ++A +          G     AA   + +A+  +G 
Sbjct: 36  VRAWGENAQGQLGNGSTLAQQTPAAVAGITRDDVRELSGGGGGAAAAANGFAVALLKDGT 95

Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 349
           V S+G+ +   LG+G    +  P  +         V  VSAG  H +A+   G V  WG 
Sbjct: 96  VKSWGNNTTGQLGNGTTTAQPFPATVAALS----GVSEVSAGLNHALAV-KGGRVLAWGN 150

Query: 350 GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGF 409
                LG G +       P+          V A    +  L   G+V+ +G    G LG 
Sbjct: 151 NASKQLGTGQDTTTPYKAPIPVQSLDKVKDVGAGCDFSVALRQDGTVWTWGKGDNGRLGT 210

Query: 410 PD---RGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDT 466
            +   R    KV  P + D      V  ++ G  H + +T  G +  +G     QLG+D+
Sbjct: 211 GNNTTRETPQKV--PDLAD------VESVAVGCEHVLALTADGVVKAWGKGAEGQLGNDS 262

Query: 467 LRGCLEPTEI 476
                 P ++
Sbjct: 263 TADSSRPVDV 272


>gi|354500509|ref|XP_003512342.1| PREDICTED: RCC1 and BTB domain-containing protein 1 [Cricetulus
           griseus]
 gi|344258048|gb|EGW14152.1| RCC1 and BTB domain-containing protein 1 [Cricetulus griseus]
          Length = 531

 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 80/261 (30%), Positives = 129/261 (49%), Gaps = 9/261 (3%)

Query: 223 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGSVVQIAAGPSY 280
           A  N   ++T    V   G N    LG GD      PK +  L  +++ S+    +GP  
Sbjct: 29  ASANEAIYVTDNDEVFVFGLNYSNCLGTGDNQSTLVPKKLEALCGKKIKSL-SYGSGPHV 87

Query: 281 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 340
           +L+ T +GVVY++G      LG+G  +  + P  + T       VV V+ G  H +AL +
Sbjct: 88  LLS-TEDGVVYAWGHNGYSQLGNGTTNQGIAPVQVCT-NLLIKQVVEVACGSHHSMALAA 145

Query: 341 SGYVYTWGKGYCGALGHGDEIDKTLPEPLSS-LKSHLAVQVCARKRKTFVLVDTGSVYGF 399
            G V+ WG   CG +G G   ++  P  ++S L +   V +   +  +  ++D+G VYG+
Sbjct: 146 DGEVFAWGYNNCGQVGSGSTANQPTPRKVTSCLHTKRVVSIACGQTSSMAVLDSGEVYGW 205

Query: 400 GWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNER 459
           G+ G G LG  + G     L P  + +L++  V+QI  G  HT+ +TD G L+ +G N  
Sbjct: 206 GYNGNGQLGLGNNG---NQLTPVRVAALQSVCVNQIVCGYAHTLALTDEGLLYAWGANTY 262

Query: 460 AQLGHDTLRGCLEPTEIFIQE 480
            QLG  +    L PT I +++
Sbjct: 263 GQLGTGSKNNLLSPTPIMVEK 283



 Score = 96.3 bits (238), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 74/253 (29%), Positives = 120/253 (47%), Gaps = 6/253 (2%)

Query: 170 ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
           AS N A +V  + +VF  G N S C G  D N+    P+ +EAL G   K ++ G     
Sbjct: 29  ASANEAIYVTDNDEVFVFGLNYSNCLGTGD-NQSTLVPKKLEALCGKKIKSLSYGSGPHV 87

Query: 230 FLTIR-GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG 288
            L+   G V+  G N + QLG+G T     P  +     +  VV++A G  + +A+  +G
Sbjct: 88  LLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPVQVCTNLLIKQVVEVACGSHHSMALAADG 147

Query: 289 VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 348
            V+++G  +   +G G   ++  PR + +       VV ++ G    +A+  SG VY WG
Sbjct: 148 EVFAWGYNNCGQVGSGSTANQPTPRKVTSCLHTK-RVVSIACGQTSSMAVLDSGEVYGWG 206

Query: 349 KGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLG 408
               G LG G+  ++  P  +++L+S    Q+      T  L D G +Y +G   +G LG
Sbjct: 207 YNGNGQLGLGNNGNQLTPVRVAALQSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLG 266

Query: 409 FPDRGVSDKVLRP 421
               G  + +L P
Sbjct: 267 ---TGSKNNLLSP 276



 Score = 84.7 bits (208), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 73/278 (26%), Positives = 115/278 (41%), Gaps = 5/278 (1%)

Query: 125 LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS-ASENHAAFVLQSGQ 183
           +  N  VF  G +    LG G   +  V   ++       +  +S  S  H     + G 
Sbjct: 37  VTDNDEVFVFGLNYSNCLGTGDNQSTLVP-KKLEALCGKKIKSLSYGSGPHVLLSTEDGV 95

Query: 184 VFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 243
           V+  G N     G+  TN+ I   ++   L      +V  G + +  L   G V   G N
Sbjct: 96  VYAWGHNGYSQLGNGTTNQGIAPVQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYN 155

Query: 244 THGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH 303
             GQ+G G T ++PTP+ +        VV IA G +  +AV  +G VY +G   N  LG 
Sbjct: 156 NCGQVGSGSTANQPTPRKVTSCLHTKRVVSIACGQTSSMAVLDSGEVYGWGYNGNGQLGL 215

Query: 304 GEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK 363
           G   ++L P  ++    + + V ++  G  H +AL   G +Y WG    G LG G + + 
Sbjct: 216 GNNGNQLTP--VRVAALQSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGSKNNL 273

Query: 364 TLPEPLSSLKSHLA-VQVCARKRKTFVLVDTGSVYGFG 400
             P P+   K  +  +  C     +      G VY +G
Sbjct: 274 LSPTPIMVEKERVVEIAACHSTHTSAAKTQGGHVYMWG 311



 Score = 61.6 bits (148), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 58/186 (31%), Positives = 87/186 (46%), Gaps = 10/186 (5%)

Query: 114 MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +++  G +H++ L ++  VF+ G + CG +G G    Q       +      VV ++  +
Sbjct: 131 VEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQPTPRKVTSCLHTKRVVSIACGQ 190

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
             +  VL SG+V+  G N +   G    N     P  V AL+ V   Q+  G   T  LT
Sbjct: 191 TSSMAVLDSGEVYGWGYNGNGQLG-LGNNGNQLTPVRVAALQSVCVNQIVCGYAHTLALT 249

Query: 233 IRGHVHTCGSNTHGQLGHG--DTLDRPTPKSIAPLEEVGSVVQIAAGPS--YMLAVTGNG 288
             G ++  G+NT+GQLG G  + L  PTP  +    E   VV+IAA  S     A T  G
Sbjct: 250 DEGLLYAWGANTYGQLGTGSKNNLLSPTPIMV----EKERVVEIAACHSTHTSAAKTQGG 305

Query: 289 VVYSFG 294
            VY +G
Sbjct: 306 HVYMWG 311


>gi|125549477|gb|EAY95299.1| hypothetical protein OsI_17124 [Oryza sativa Indica Group]
          Length = 1042

 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 96/314 (30%), Positives = 148/314 (47%), Gaps = 24/314 (7%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRD--TNRPIFRPRLVEALKGVPCKQVT 222
           V  ++  ENHAA + + G+V+T G  SS   G  D   N     P++VE+L  V  K V 
Sbjct: 265 VQSIACGENHAAIITKQGEVYTWGSYSS---GRLDQKVNVNASCPKMVESLASVHVKAVA 321

Query: 223 AGLNFTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTP-KSIAPLEEVGSVVQIAAGPS 279
            G   T  +T+ G +   G   H  G +      ++  P K + P++ + SV +IA G  
Sbjct: 322 FGSKHTCAITVSGELFEWGEGAHSLGLMNDWYGRNQWFPHKFLGPMDNI-SVSKIACGEW 380

Query: 280 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL- 338
           +   +T +G ++++G G+   LGHG+     +P+ +++   KG  V  V+ G  H  A+ 
Sbjct: 381 HTAIITSSGQLFTYGDGTFGVLGHGDTQGVARPKEVESL--KGSRVKSVACGPWHTAAIV 438

Query: 339 ---------DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFV 389
                      SG ++TWG    G LGH D   K LP  + SL ++  +QV      T V
Sbjct: 439 EVMSSFKGNAPSGKLFTWGDADRGKLGHADRKMKLLPTCVDSLTAYDLIQVSCGTAVTVV 498

Query: 390 LVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRG 449
           L  TG V+  G    G LG P    +D      +   L+   V +IS+G  H  V+T  G
Sbjct: 499 LTVTGMVFTIGSSRHGQLGNPK---ADGESICSVEGPLKTEFVREISSGSSHVAVLTMSG 555

Query: 450 RLFGFGDNERAQLG 463
           ++F +G     QLG
Sbjct: 556 KVFTWGKGAEGQLG 569



 Score = 96.3 bits (238), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 83/285 (29%), Positives = 129/285 (45%), Gaps = 29/285 (10%)

Query: 203 PIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSI 262
           P   PRLV + K +  + +  G N    +T +G V+T GS + G+L     ++   PK +
Sbjct: 250 PKSLPRLVGSAKMLDVQSIACGENHAAIITKQGEVYTWGSYSSGRLDQKVNVNASCPKMV 309

Query: 263 APLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS------NFCLGHGEQ--HDELQPRA 314
             L  V  V  +A G  +  A+T +G ++ +G G+      N   G  +   H  L P  
Sbjct: 310 ESLASV-HVKAVAFGSKHTCAITVSGELFEWGEGAHSLGLMNDWYGRNQWFPHKFLGPM- 367

Query: 315 IQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKS 374
                   I V +++ G+ H   + SSG ++T+G G  G LGHGD      P+ + SLK 
Sbjct: 368 ------DNISVSKIACGEWHTAIITSSGQLFTYGDGTFGVLGHGDTQGVARPKEVESLKG 421

Query: 375 HLAVQVCARKRKTFVLVD----------TGSVYGFGWMGFGSLGFPDRGVSDKVLRPRIL 424
                V      T  +V+          +G ++ +G    G LG  DR +    L P  +
Sbjct: 422 SRVKSVACGPWHTAAIVEVMSSFKGNAPSGKLFTWGDADRGKLGHADRKMK---LLPTCV 478

Query: 425 DSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG 469
           DSL A+ + Q+S G   TVV+T  G +F  G +   QLG+    G
Sbjct: 479 DSLTAYDLIQVSCGTAVTVVLTVTGMVFTIGSSRHGQLGNPKADG 523



 Score = 86.3 bits (212), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 69/221 (31%), Positives = 108/221 (48%), Gaps = 18/221 (8%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V +++  E H A +  SGQ+FT GD +    GH DT + + RP+ VE+LKG   K V  G
Sbjct: 372 VSKIACGEWHTAIITSSGQLFTYGDGTFGVLGHGDT-QGVARPKEVESLKGSRVKSVACG 430

Query: 225 LNFTGFL----------TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQI 274
              T  +             G + T G    G+LGH D   +  P  +  L     ++Q+
Sbjct: 431 PWHTAAIVEVMSSFKGNAPSGKLFTWGDADRGKLGHADRKMKLLPTCVDSLTAY-DLIQV 489

Query: 275 AAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFR--RKGIHVVRVSAGD 332
           + G +  + +T  G+V++ GS  +  LG+ +   E    +I +     K   V  +S+G 
Sbjct: 490 SCGTAVTVVLTVTGMVFTIGSSRHGQLGNPKADGE----SICSVEGPLKTEFVREISSGS 545

Query: 333 EHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
            HV  L  SG V+TWGKG  G LG GD  +++ P  + +L+
Sbjct: 546 SHVAVLTMSGKVFTWGKGAEGQLGLGDYSNRSSPTLVEALE 586



 Score = 79.7 bits (195), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 63/234 (26%), Positives = 112/234 (47%), Gaps = 25/234 (10%)

Query: 259 PKSIAPLEEVGS-----VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPR 313
           PKS+  L  VGS     V  IA G ++   +T  G VY++GS S+  L      +   P+
Sbjct: 250 PKSLPRL--VGSAKMLDVQSIACGENHAAIITKQGEVYTWGSYSSGRLDQKVNVNASCPK 307

Query: 314 AIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY--CGALGHGDEIDKTLPEPLSS 371
            +++     +HV  V+ G +H  A+  SG ++ WG+G    G +      ++  P     
Sbjct: 308 MVESL--ASVHVKAVAFGSKHTCAITVSGELFEWGEGAHSLGLMNDWYGRNQWFPHKFLG 365

Query: 372 LKSHLAV-QVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAH 430
              +++V ++   +  T ++  +G ++ +G   FG LG  D   +  V RP+ ++SL+  
Sbjct: 366 PMDNISVSKIACGEWHTAIITSSGQLFTYGDGTFGVLGHGD---TQGVARPKEVESLKGS 422

Query: 431 HVSQISTGLYHTVVVTD----------RGRLFGFGDNERAQLGHDTLRGCLEPT 474
            V  ++ G +HT  + +           G+LF +GD +R +LGH   +  L PT
Sbjct: 423 RVKSVACGPWHTAAIVEVMSSFKGNAPSGKLFTWGDADRGKLGHADRKMKLLPT 476



 Score = 71.6 bits (174), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 80/344 (23%), Positives = 138/344 (40%), Gaps = 22/344 (6%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           I  G  H  +I+    V++ GS   G L              +   ++ HV  V+    H
Sbjct: 268 IACGENHAAIITKQGEVYTWGSYSSGRLDQKVNVNASCP-KMVESLASVHVKAVAFGSKH 326

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDT--NRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
              +  SG++F  G+ +       D       F  + +  +  +   ++  G   T  +T
Sbjct: 327 TCAITVSGELFEWGEGAHSLGLMNDWYGRNQWFPHKFLGPMDNISVSKIACGEWHTAIIT 386

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ-IAAGPSYMLAVT------ 285
             G + T G  T G LGHGDT     PK +  L+  GS V+ +A GP +  A+       
Sbjct: 387 SSGQLFTYGDGTFGVLGHGDTQGVARPKEVESLK--GSRVKSVACGPWHTAAIVEVMSSF 444

Query: 286 -GN---GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 341
            GN   G ++++G      LGH ++  +L P  + +       +++VS G    V L  +
Sbjct: 445 KGNAPSGKLFTWGDADRGKLGHADRKMKLLPTCVDSL--TAYDLIQVSCGTAVTVVLTVT 502

Query: 342 GYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGW 401
           G V+T G    G LG+     +++      LK+    ++ +      VL  +G V+ +G 
Sbjct: 503 GMVFTIGSSRHGQLGNPKADGESICSVEGPLKTEFVREISSGSSHVAVLTMSGKVFTWGK 562

Query: 402 MGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVV 445
              G LG  D         P ++++L    V  +  G   T  +
Sbjct: 563 GAEGQLGLGDYSNRSS---PTLVEALEGRDVESVVCGFNFTAAI 603



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 44/157 (28%), Positives = 72/157 (45%), Gaps = 2/157 (1%)

Query: 321 KGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQV 380
           K + V  ++ G+ H   +   G VYTWG    G L     ++ + P+ + SL S     V
Sbjct: 261 KMLDVQSIACGENHAAIITKQGEVYTWGSYSSGRLDQKVNVNASCPKMVESLASVHVKAV 320

Query: 381 CARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRP-RILDSLRAHHVSQISTGL 439
               + T  +  +G ++ +G  G  SLG  +         P + L  +    VS+I+ G 
Sbjct: 321 AFGSKHTCAITVSGELFEWG-EGAHSLGLMNDWYGRNQWFPHKFLGPMDNISVSKIACGE 379

Query: 440 YHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 476
           +HT ++T  G+LF +GD     LGH   +G   P E+
Sbjct: 380 WHTAIITSSGQLFTYGDGTFGVLGHGDTQGVARPKEV 416



 Score = 42.7 bits (99), Expect = 0.46,   Method: Compositional matrix adjust.
 Identities = 36/105 (34%), Positives = 52/105 (49%), Gaps = 6/105 (5%)

Query: 131 VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVV-QVSASENHAAFVLQSGQVFTCGD 189
           VF+ GSS  G LG+     +  S   +  P     V ++S+  +H A +  SG+VFT G 
Sbjct: 505 VFTIGSSRHGQLGNPKADGE--SICSVEGPLKTEFVREISSGSSHVAVLTMSGKVFTWGK 562

Query: 190 NSSFCCGHRD-TNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
            +    G  D +NR    P LVEAL+G   + V  G NFT  + +
Sbjct: 563 GAEGQLGLGDYSNRS--SPTLVEALEGRDVESVVCGFNFTAAICL 605


>gi|218779101|ref|YP_002430419.1| chromosome condensation regulator RCC1 [Desulfatibacillum
           alkenivorans AK-01]
 gi|218760485|gb|ACL02951.1| regulator of chromosome condensation RCC1 [Desulfatibacillum
           alkenivorans AK-01]
          Length = 671

 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 104/359 (28%), Positives = 163/359 (45%), Gaps = 45/359 (12%)

Query: 114 MQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           + +  G  H+L +S + SV+S GS+  G LG         S T  +  +  H        
Sbjct: 41  VSLAGGEKHSLAVSGDGSVWSWGSNSAGQLG-------VESLTPASVLAPVHA------- 86

Query: 173 NHAAFVLQSGQVF-----TCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF 227
                 L SG  F     T GD +   C     +     P L      VP   + AG  F
Sbjct: 87  ------LYSGDDFHLFYDTDGDGTGDICDDCPYDPFKTAPGLSGCGNAVP--MLAAGTQF 138

Query: 228 TGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN 287
           +  L   G V + G NT+  LG GD +DR TP+ +   E + + V +AAG  + LA+T +
Sbjct: 139 SLGLKTDGTVWSWGCNTYATLGLGDRVDRNTPQKV---EALSNAVALAAGDDHTLALTRD 195

Query: 288 GVVYSFGSGSNFCLGHGEQHD---ELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           G V+S+G   N  LG G  H+   E  P+ ++       +V  ++A   H  AL   G V
Sbjct: 196 GSVWSWGWNYNGQLGLGSIHEDTYESTPKKVEAIS----NVTAIAAQTYHTQALTRDGNV 251

Query: 345 YTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGF 404
           ++WG    G LG GD+ D+  P+ + +L + +A+   A    +  +   G V+ +G    
Sbjct: 252 WSWGSNDFGQLGMGDQNDRDAPQKVEALSNVVAIN--AGGNHSLAVTRDGQVWAWGENSE 309

Query: 405 GSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 463
           G LG  D    D    P+ +++L   +V  I+ G  HT+ +T  G ++ +G N R Q+G
Sbjct: 310 GQLGLGDLWDRDA---PQKVEALS--NVVAINAGGDHTLALTRDGSVWAWGKNGRGQIG 363



 Score = 99.0 bits (245), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 76/239 (31%), Positives = 121/239 (50%), Gaps = 18/239 (7%)

Query: 125 LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQV 184
           L ++ +V+S G +    LG G    +    T     + ++ V ++A ++H   + + G V
Sbjct: 142 LKTDGTVWSWGCNTYATLGLGDRVDR---NTPQKVEALSNAVALAAGDDHTLALTRDGSV 198

Query: 185 FTCGDNSSFCCG----HRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTC 240
           ++ G N +   G    H DT      P+ VEA+  V    + A    T  LT  G+V + 
Sbjct: 199 WSWGWNYNGQLGLGSIHEDTYEST--PKKVEAISNV--TAIAAQTYHTQALTRDGNVWSW 254

Query: 241 GSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 300
           GSN  GQLG GD  DR  P+ +   E + +VV I AG ++ LAVT +G V+++G  S   
Sbjct: 255 GSNDFGQLGMGDQNDRDAPQKV---EALSNVVAINAGGNHSLAVTRDGQVWAWGENSEGQ 311

Query: 301 LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGD 359
           LG G+  D   P+ ++       +VV ++AG +H +AL   G V+ WGK   G +G G+
Sbjct: 312 LGLGDLWDRDAPQKVEALS----NVVAINAGGDHTLALTRDGSVWAWGKNGRGQIGTGE 366



 Score = 95.9 bits (237), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 92/341 (26%), Positives = 158/341 (46%), Gaps = 42/341 (12%)

Query: 130 SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGD 189
           ++++ G +  G LG G    Q +    +     ++VV ++  E H+  V   G V++ G 
Sbjct: 8   ALWTWGGNDDGRLGIGATGDQNLP---VQLSYLSNVVSLAGGEKHSLAVSGDGSVWSWGS 64

Query: 190 NSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLG 249
           NS+   G            L  A    P   + +G +F  F    G             G
Sbjct: 65  NSAGQLGVE---------SLTPASVLAPVHALYSGDDFHLFYDTDGD------------G 103

Query: 250 HGDTLDR-P-TPKSIAP-LEEVGSVV-QIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGE 305
            GD  D  P  P   AP L   G+ V  +AAG  + L +  +G V+S+G  +   LG G+
Sbjct: 104 TGDICDDCPYDPFKTAPGLSGCGNAVPMLAAGTQFSLGLKTDGTVWSWGCNTYATLGLGD 163

Query: 306 QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG---DEID 362
           + D   P+ ++       + V ++AGD+H +AL   G V++WG  Y G LG G   ++  
Sbjct: 164 RVDRNTPQKVEALS----NAVALAAGDDHTLALTRDGSVWSWGWNYNGQLGLGSIHEDTY 219

Query: 363 KTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPR 422
           ++ P+ + ++ +  A+   A+   T  L   G+V+ +G   FG LG  D+   D    P+
Sbjct: 220 ESTPKKVEAISNVTAI--AAQTYHTQALTRDGNVWSWGSNDFGQLGMGDQNDRDA---PQ 274

Query: 423 ILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 463
            +++L   +V  I+ G  H++ VT  G+++ +G+N   QLG
Sbjct: 275 KVEALS--NVVAINAGGNHSLAVTRDGQVWAWGENSEGQLG 313



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 75/268 (27%), Positives = 121/268 (45%), Gaps = 42/268 (15%)

Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 290
           +T  G + T G N  G+LG G T D+  P  ++ L    +VV +A G  + LAV+G+G V
Sbjct: 3   VTQGGALWTWGGNDDGRLGIGATGDQNLPVQLSYLS---NVVSLAGGEKHSLAVSGDGSV 59

Query: 291 YSFGS-------------------------GSNFCL-------GHGEQHDELQPRAIQT- 317
           +S+GS                         G +F L       G G+  D+      +T 
Sbjct: 60  WSWGSNSAGQLGVESLTPASVLAPVHALYSGDDFHLFYDTDGDGTGDICDDCPYDPFKTA 119

Query: 318 --FRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSH 375
                 G  V  ++AG +  + L + G V++WG      LG GD +D+  P+ + +L + 
Sbjct: 120 PGLSGCGNAVPMLAAGTQFSLGLKTDGTVWSWGCNTYATLGLGDRVDRNTPQKVEALSN- 178

Query: 376 LAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQI 435
            AV + A    T  L   GSV+ +GW   G LG            P+ ++++   +V+ I
Sbjct: 179 -AVALAAGDDHTLALTRDGSVWSWGWNYNGQLGLGSIHEDTYESTPKKVEAIS--NVTAI 235

Query: 436 STGLYHTVVVTDRGRLFGFGDNERAQLG 463
           +   YHT  +T  G ++ +G N+  QLG
Sbjct: 236 AAQTYHTQALTRDGNVWSWGSNDFGQLG 263


>gi|297603248|ref|NP_001053665.2| Os04g0583700 [Oryza sativa Japonica Group]
 gi|255675724|dbj|BAF15579.2| Os04g0583700 [Oryza sativa Japonica Group]
          Length = 1065

 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 95/314 (30%), Positives = 148/314 (47%), Gaps = 24/314 (7%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRD--TNRPIFRPRLVEALKGVPCKQVT 222
           V  ++  ENHAA + + G+V+T G   S+  G  D   N     P++VE+L  V  K V 
Sbjct: 264 VQSIACGENHAAIITKQGEVYTWG---SYSSGRLDQKVNVNASCPKMVESLASVHVKAVA 320

Query: 223 AGLNFTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTP-KSIAPLEEVGSVVQIAAGPS 279
            G   T  +T+ G +   G   H  G +      ++  P K + P++ + SV +IA G  
Sbjct: 321 FGSKHTCAITVSGELFEWGEGAHSLGLMNDWYGRNQWFPHKFLGPMDNI-SVSKIACGEW 379

Query: 280 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL- 338
           +   +T +G ++++G G+   LGHG+     +P+ +++   KG  V  V+ G  H  A+ 
Sbjct: 380 HTAIITSSGQLFTYGDGTFGVLGHGDTQGVARPKEVESL--KGSRVKSVACGPWHTAAIV 437

Query: 339 ---------DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFV 389
                      SG ++TWG    G LGH D   K LP  + SL ++  +QV      T V
Sbjct: 438 EVMSSFKGNAPSGKLFTWGDADRGKLGHADRKMKLLPTCVDSLTAYDLIQVSCGTAVTVV 497

Query: 390 LVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRG 449
           L  TG V+  G    G LG P    +D      +   L+   V +IS+G  H  V+T  G
Sbjct: 498 LTVTGMVFTIGSSRHGQLGNPK---ADGESICSVEGPLKTEFVREISSGSSHVAVLTMSG 554

Query: 450 RLFGFGDNERAQLG 463
           ++F +G     QLG
Sbjct: 555 KVFTWGKGAEGQLG 568



 Score = 95.9 bits (237), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 83/285 (29%), Positives = 129/285 (45%), Gaps = 29/285 (10%)

Query: 203 PIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSI 262
           P   PRLV + K +  + +  G N    +T +G V+T GS + G+L     ++   PK +
Sbjct: 249 PKSLPRLVGSAKMLDVQSIACGENHAAIITKQGEVYTWGSYSSGRLDQKVNVNASCPKMV 308

Query: 263 APLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS------NFCLGHGEQ--HDELQPRA 314
             L  V  V  +A G  +  A+T +G ++ +G G+      N   G  +   H  L P  
Sbjct: 309 ESLASV-HVKAVAFGSKHTCAITVSGELFEWGEGAHSLGLMNDWYGRNQWFPHKFLGPM- 366

Query: 315 IQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKS 374
                   I V +++ G+ H   + SSG ++T+G G  G LGHGD      P+ + SLK 
Sbjct: 367 ------DNISVSKIACGEWHTAIITSSGQLFTYGDGTFGVLGHGDTQGVARPKEVESLKG 420

Query: 375 HLAVQVCARKRKTFVLVD----------TGSVYGFGWMGFGSLGFPDRGVSDKVLRPRIL 424
                V      T  +V+          +G ++ +G    G LG  DR +    L P  +
Sbjct: 421 SRVKSVACGPWHTAAIVEVMSSFKGNAPSGKLFTWGDADRGKLGHADRKMK---LLPTCV 477

Query: 425 DSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG 469
           DSL A+ + Q+S G   TVV+T  G +F  G +   QLG+    G
Sbjct: 478 DSLTAYDLIQVSCGTAVTVVLTVTGMVFTIGSSRHGQLGNPKADG 522



 Score = 86.3 bits (212), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 69/221 (31%), Positives = 108/221 (48%), Gaps = 18/221 (8%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V +++  E H A +  SGQ+FT GD +    GH DT + + RP+ VE+LKG   K V  G
Sbjct: 371 VSKIACGEWHTAIITSSGQLFTYGDGTFGVLGHGDT-QGVARPKEVESLKGSRVKSVACG 429

Query: 225 LNFTGFL----------TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQI 274
              T  +             G + T G    G+LGH D   +  P  +  L     ++Q+
Sbjct: 430 PWHTAAIVEVMSSFKGNAPSGKLFTWGDADRGKLGHADRKMKLLPTCVDSLTAY-DLIQV 488

Query: 275 AAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFR--RKGIHVVRVSAGD 332
           + G +  + +T  G+V++ GS  +  LG+ +   E    +I +     K   V  +S+G 
Sbjct: 489 SCGTAVTVVLTVTGMVFTIGSSRHGQLGNPKADGE----SICSVEGPLKTEFVREISSGS 544

Query: 333 EHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
            HV  L  SG V+TWGKG  G LG GD  +++ P  + +L+
Sbjct: 545 SHVAVLTMSGKVFTWGKGAEGQLGLGDYSNRSSPTLVEALE 585



 Score = 79.3 bits (194), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 63/234 (26%), Positives = 112/234 (47%), Gaps = 25/234 (10%)

Query: 259 PKSIAPLEEVGS-----VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPR 313
           PKS+  L  VGS     V  IA G ++   +T  G VY++GS S+  L      +   P+
Sbjct: 249 PKSLPRL--VGSAKMLDVQSIACGENHAAIITKQGEVYTWGSYSSGRLDQKVNVNASCPK 306

Query: 314 AIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY--CGALGHGDEIDKTLPEPLSS 371
            +++     +HV  V+ G +H  A+  SG ++ WG+G    G +      ++  P     
Sbjct: 307 MVESL--ASVHVKAVAFGSKHTCAITVSGELFEWGEGAHSLGLMNDWYGRNQWFPHKFLG 364

Query: 372 LKSHLAV-QVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAH 430
              +++V ++   +  T ++  +G ++ +G   FG LG  D   +  V RP+ ++SL+  
Sbjct: 365 PMDNISVSKIACGEWHTAIITSSGQLFTYGDGTFGVLGHGD---TQGVARPKEVESLKGS 421

Query: 431 HVSQISTGLYHTVVVTD----------RGRLFGFGDNERAQLGHDTLRGCLEPT 474
            V  ++ G +HT  + +           G+LF +GD +R +LGH   +  L PT
Sbjct: 422 RVKSVACGPWHTAAIVEVMSSFKGNAPSGKLFTWGDADRGKLGHADRKMKLLPT 475



 Score = 72.0 bits (175), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 80/344 (23%), Positives = 138/344 (40%), Gaps = 22/344 (6%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           I  G  H  +I+    V++ GS   G L              +   ++ HV  V+    H
Sbjct: 267 IACGENHAAIITKQGEVYTWGSYSSGRLDQKVNVNASCP-KMVESLASVHVKAVAFGSKH 325

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDT--NRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
              +  SG++F  G+ +       D       F  + +  +  +   ++  G   T  +T
Sbjct: 326 TCAITVSGELFEWGEGAHSLGLMNDWYGRNQWFPHKFLGPMDNISVSKIACGEWHTAIIT 385

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ-IAAGPSYMLAVT------ 285
             G + T G  T G LGHGDT     PK +  L+  GS V+ +A GP +  A+       
Sbjct: 386 SSGQLFTYGDGTFGVLGHGDTQGVARPKEVESLK--GSRVKSVACGPWHTAAIVEVMSSF 443

Query: 286 -GN---GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 341
            GN   G ++++G      LGH ++  +L P  + +       +++VS G    V L  +
Sbjct: 444 KGNAPSGKLFTWGDADRGKLGHADRKMKLLPTCVDSL--TAYDLIQVSCGTAVTVVLTVT 501

Query: 342 GYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGW 401
           G V+T G    G LG+     +++      LK+    ++ +      VL  +G V+ +G 
Sbjct: 502 GMVFTIGSSRHGQLGNPKADGESICSVEGPLKTEFVREISSGSSHVAVLTMSGKVFTWGK 561

Query: 402 MGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVV 445
              G LG  D         P ++++L    V  +  G   T  +
Sbjct: 562 GAEGQLGLGDYSNRSS---PTLVEALEGRDVESVVCGFNFTAAI 602



 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 44/157 (28%), Positives = 72/157 (45%), Gaps = 2/157 (1%)

Query: 321 KGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQV 380
           K + V  ++ G+ H   +   G VYTWG    G L     ++ + P+ + SL S     V
Sbjct: 260 KMLDVQSIACGENHAAIITKQGEVYTWGSYSSGRLDQKVNVNASCPKMVESLASVHVKAV 319

Query: 381 CARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRP-RILDSLRAHHVSQISTGL 439
               + T  +  +G ++ +G  G  SLG  +         P + L  +    VS+I+ G 
Sbjct: 320 AFGSKHTCAITVSGELFEWG-EGAHSLGLMNDWYGRNQWFPHKFLGPMDNISVSKIACGE 378

Query: 440 YHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 476
           +HT ++T  G+LF +GD     LGH   +G   P E+
Sbjct: 379 WHTAIITSSGQLFTYGDGTFGVLGHGDTQGVARPKEV 415



 Score = 42.7 bits (99), Expect = 0.39,   Method: Compositional matrix adjust.
 Identities = 36/105 (34%), Positives = 52/105 (49%), Gaps = 6/105 (5%)

Query: 131 VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVV-QVSASENHAAFVLQSGQVFTCGD 189
           VF+ GSS  G LG+     +  S   +  P     V ++S+  +H A +  SG+VFT G 
Sbjct: 504 VFTIGSSRHGQLGNPKADGE--SICSVEGPLKTEFVREISSGSSHVAVLTMSGKVFTWGK 561

Query: 190 NSSFCCGHRD-TNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
            +    G  D +NR    P LVEAL+G   + V  G NFT  + +
Sbjct: 562 GAEGQLGLGDYSNRS--SPTLVEALEGRDVESVVCGFNFTAAICL 604


>gi|444916978|ref|ZP_21237086.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
 gi|444711624|gb|ELW52563.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
          Length = 734

 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 110/368 (29%), Positives = 170/368 (46%), Gaps = 22/368 (5%)

Query: 111 AGNMQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS 169
           +G + +  G  H+L++ S+ +V+S G ++ G LG G    +  S  ++++ S      VS
Sbjct: 334 SGGVTLVAGYKHSLVLRSDGTVWSWGDNVFGQLGDGTFNPRS-SAVKVSWLSLGRA-DVS 391

Query: 170 ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCK-QVTAGLNFT 228
           + + H+  +  +G V+  GDN S   G+           LV A  G+     V+AG   T
Sbjct: 392 SGQLHSVVLDSNGAVWAWGDNYSGQLGN-----GTGLDSLVAAPVGLGGSVAVSAGFKHT 446

Query: 229 GFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG 288
             L     V   G N HGQLG G   DR  P  +A L  V +V   +AG  + LA+  NG
Sbjct: 447 LVLKADTTVWAWGVNEHGQLGDGTLTDRTRPVQVAGLSGVSAV---SAGSYHSLALRSNG 503

Query: 289 VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 348
            V+++G      LG G   D LQP  +Q     G  VV V+AGD H +AL S G V+ WG
Sbjct: 504 TVWAWGFNRYGQLGDGTNTDRLQP--VQVAGLSG--VVAVAAGDSHSLALRSDGTVWAWG 559

Query: 349 KGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLG 408
             + G +G G    + LP  +  +     V V A    +  L   G+V+ +G+ G G LG
Sbjct: 560 YNFDGQIGDGSYSWRFLP--VQVVGLSGVVSVSAGGYHSLALRSDGTVWTWGYNGSGQLG 617

Query: 409 FPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLR 468
                 S  + +P  +       V  + +G YH++ +   G ++ +G N   QLG  +L 
Sbjct: 618 DG----STAINKPAPVQVAGLSGVVSLGSGNYHSLGLRSDGTVWAWGFNFDGQLGDGSLL 673

Query: 469 GCLEPTEI 476
               P  +
Sbjct: 674 NRSTPVRV 681



 Score = 98.2 bits (243), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 107/371 (28%), Positives = 166/371 (44%), Gaps = 31/371 (8%)

Query: 111 AGNMQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS 169
           +G + +  G Y++L L S+ +V++ G +  G LG G  T + V    +N    + V+ +S
Sbjct: 186 SGVIAVVAGGYYSLALRSDGTVWAWGDNRYGQLGDGTTTQRAVPVQVLNL---SGVMNLS 242

Query: 170 ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
           A   H   +   G V+  G N+    G   T    F+P  V    G+         N+  
Sbjct: 243 AGSFHTVALRSDGSVWAWGFNAYGQLGD-GTTTSRFQPVQV----GLSDVLTLVAGNYH- 296

Query: 230 FLTIR--GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN 287
            L +R  G V   G N + QLG G T     P        +   V + AG  + L +  +
Sbjct: 297 SLAVRSDGAVWAWGDNRYRQLGDGTTTSSRVPVQ----SGLSGGVTLVAGYKHSLVLRSD 352

Query: 288 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVR--VSAGDEHVVALDSSGYVY 345
           G V+S+G      LG G       PR+    +   + + R  VS+G  H V LDS+G V+
Sbjct: 353 GTVWSWGDNVFGQLGDGT----FNPRS-SAVKVSWLSLGRADVSSGQLHSVVLDSNGAVW 407

Query: 346 TWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFG 405
            WG  Y G LG+G  +D  +  P+    S   V V A  + T VL    +V+ +G    G
Sbjct: 408 AWGDNYSGQLGNGTGLDSLVAAPVGLGGS---VAVSAGFKHTLVLKADTTVWAWGVNEHG 464

Query: 406 SLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHD 465
            LG  D  ++D+  RP  +  L    VS +S G YH++ +   G ++ +G N   QLG  
Sbjct: 465 QLG--DGTLTDRT-RPVQVAGLSG--VSAVSAGSYHSLALRSNGTVWAWGFNRYGQLGDG 519

Query: 466 TLRGCLEPTEI 476
           T    L+P ++
Sbjct: 520 TNTDRLQPVQV 530



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 69/247 (27%), Positives = 113/247 (45%), Gaps = 14/247 (5%)

Query: 235 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 294
           G V   G N  GQLG G  +D PTP  +  L     VV +A+G  + L ++ +G V+++G
Sbjct: 55  GTVWAWGFNRQGQLGDGTLVDSPTPVRVTNLS---GVVSVASGDYHSLGLSSDGTVWAWG 111

Query: 295 SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGA 354
             +   LG+G       P  +Q        VV + +G  H +AL S G V+ WG      
Sbjct: 112 DNTAGQLGNGTASASPVPVRVQNLS----GVVSLGSGFSHGLALRSDGTVWAWGDNRYNQ 167

Query: 355 LGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGV 414
           LG+       LP  +  L   +AV   A    +  L   G+V+ +G   +G LG  D   
Sbjct: 168 LGNVGATRSNLPVQVPGLSGVIAV--VAGGYYSLALRSDGTVWAWGDNRYGQLG--DGTT 223

Query: 415 SDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPT 474
           + + +  ++L+      V  +S G +HTV +   G ++ +G N   QLG  T     +P 
Sbjct: 224 TQRAVPVQVLN---LSGVMNLSAGSFHTVALRSDGSVWAWGFNAYGQLGDGTTTSRFQPV 280

Query: 475 EIFIQEM 481
           ++ + ++
Sbjct: 281 QVGLSDV 287



 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 98/358 (27%), Positives = 156/358 (43%), Gaps = 36/358 (10%)

Query: 114 MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSA-AHVVQVSAS 171
           + +  G YH+L + S+ +V++ G +    LG G  T+     +R+   S  +  V + A 
Sbjct: 288 LTLVAGNYHSLAVRSDGAVWAWGDNRYRQLGDGTTTS-----SRVPVQSGLSGGVTLVAG 342

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALK----GVPCKQVTAGLNF 227
             H+  +   G V++ GDN     G        F PR   A+K     +    V++G   
Sbjct: 343 YKHSLVLRSDGTVWSWGDNVFGQLGD-----GTFNPR-SSAVKVSWLSLGRADVSSGQLH 396

Query: 228 TGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN 287
           +  L   G V   G N  GQLG+G  LD      +A    +G  V ++AG  + L +  +
Sbjct: 397 SVVLDSNGAVWAWGDNYSGQLGNGTGLD----SLVAAPVGLGGSVAVSAGFKHTLVLKAD 452

Query: 288 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 347
             V+++G   +  LG G   D  +P  +Q     G+  V  SAG  H +AL S+G V+ W
Sbjct: 453 TTVWAWGVNEHGQLGDGTLTDRTRP--VQVAGLSGVSAV--SAGSYHSLALRSNGTVWAW 508

Query: 348 GKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSL 407
           G    G LG G   D+  P  ++ L     V V A    +  L   G+V+ +G+   G +
Sbjct: 509 GFNRYGQLGDGTNTDRLQPVQVAGLSG--VVAVAAGDSHSLALRSDGTVWAWGYNFDGQI 566

Query: 408 GFPDRGVSDKVLRPRIL--DSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 463
           G       D     R L    +    V  +S G YH++ +   G ++ +G N   QLG
Sbjct: 567 G-------DGSYSWRFLPVQVVGLSGVVSVSAGGYHSLALRSDGTVWTWGYNGSGQLG 617



 Score = 79.7 bits (195), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 93/346 (26%), Positives = 146/346 (42%), Gaps = 25/346 (7%)

Query: 134 CGSSLCGVLGHGPETTQCVSFTRINFP--SAAHVVQVSASENHAAFVLQSGQVFTCGDNS 191
            G+ L    G GP   +  +  R+  P    +   +++  + H+  V   G V+  G N 
Sbjct: 6   LGAWLVAGCGPGPGVEEP-ALGRVRSPLGGRSSAARLALGQYHSVGVHSDGTVWAWGFNR 64

Query: 192 SFCCGHRD-TNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGH 250
               G     + P   P  V  L GV    V +G   +  L+  G V   G NT GQLG+
Sbjct: 65  QGQLGDGTLVDSPT--PVRVTNLSGVVS--VASGDYHSLGLSSDGTVWAWGDNTAGQLGN 120

Query: 251 GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH-GEQHDE 309
           G     P P  +   + +  VV + +G S+ LA+  +G V+++G      LG+ G     
Sbjct: 121 GTASASPVPVRV---QNLSGVVSLGSGFSHGLALRSDGTVWAWGDNRYNQLGNVGATRSN 177

Query: 310 LQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPL 369
           L    +Q     G  V+ V AG  + +AL S G V+ WG    G LG G    + +P  +
Sbjct: 178 LP---VQVPGLSG--VIAVVAGGYYSLALRSDGTVWAWGDNRYGQLGDGTTTQRAVPVQV 232

Query: 370 SSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRA 429
            +L     + + A    T  L   GSV+ +G+  +G LG    G +    +P     +  
Sbjct: 233 LNLSG--VMNLSAGSFHTVALRSDGSVWAWGFNAYGQLG---DGTTTSRFQPV---QVGL 284

Query: 430 HHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTE 475
             V  +  G YH++ V   G ++ +GDN   QLG  T      P +
Sbjct: 285 SDVLTLVAGNYHSLAVRSDGAVWAWGDNRYRQLGDGTTTSSRVPVQ 330



 Score = 79.3 bits (194), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 77/254 (30%), Positives = 117/254 (46%), Gaps = 17/254 (6%)

Query: 116 ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           ++ G YH+L L SN +V++ G +  G LG G  T +      +     + VV V+A ++H
Sbjct: 489 VSAGSYHSLALRSNGTVWAWGFNRYGQLGDGTNTDR---LQPVQVAGLSGVVAVAAGDSH 545

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 234
           +  +   G V+  G N     G    +   +R   V+ +       V+AG   +  L   
Sbjct: 546 SLALRSDGTVWAWGYNFDGQIGDGSYS---WRFLPVQVVGLSGVVSVSAGGYHSLALRSD 602

Query: 235 GHVHTCGSNTHGQLGHGDT-LDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
           G V T G N  GQLG G T +++P P  +A L     VV + +G  + L +  +G V+++
Sbjct: 603 GTVWTWGYNGSGQLGDGSTAINKPAPVQVAGLS---GVVSLGSGNYHSLGLRSDGTVWAW 659

Query: 294 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIH-VVRVSAGDEHVVALDSSGYVYTWGKGYC 352
           G   +  LG G   +   P      R  G+  VV V AGD H +A  S G V+ WG    
Sbjct: 660 GFNFDGQLGDGSLLNRSTP-----VRVSGLSGVVSVVAGDYHSLARRSDGTVWAWGYNGE 714

Query: 353 GALGHGDEIDKTLP 366
           G LG G   D  +P
Sbjct: 715 GQLGDGTRNDTLVP 728



 Score = 79.0 bits (193), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 92/348 (26%), Positives = 142/348 (40%), Gaps = 62/348 (17%)

Query: 110 SAGNMQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQV 168
           S G   +++G+ H++++ SN +V++ G +  G LG+G      V+   +    +   V V
Sbjct: 384 SLGRADVSSGQLHSVVLDSNGAVWAWGDNYSGQLGNGTGLDSLVA-APVGLGGS---VAV 439

Query: 169 SASENHAAFVLQSGQVFTCGDNSSFCCGHRD-TNRPIFRPRLVEALKGVPCKQVTAGLNF 227
           SA   H   +     V+  G N     G    T+R   RP  V  L GV    V+AG   
Sbjct: 440 SAGFKHTLVLKADTTVWAWGVNEHGQLGDGTLTDRT--RPVQVAGLSGVSA--VSAGSYH 495

Query: 228 TGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN 287
           +  L   G V   G N +GQLG G   DR  P  +A L     VV +AAG S+ LA+  +
Sbjct: 496 SLALRSNGTVWAWGFNRYGQLGDGTNTDRLQPVQVAGLS---GVVAVAAGDSHSLALRSD 552

Query: 288 GVVYSFGSGSNFCLGHGEQHDELQP----------------------RAIQTFRRKGIH- 324
           G V+++G   +  +G G       P                      R+  T    G + 
Sbjct: 553 GTVWAWGYNFDGQIGDGSYSWRFLPVQVVGLSGVVSVSAGGYHSLALRSDGTVWTWGYNG 612

Query: 325 ------------------------VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 360
                                   VV + +G+ H + L S G V+ WG  + G LG G  
Sbjct: 613 SGQLGDGSTAINKPAPVQVAGLSGVVSLGSGNYHSLGLRSDGTVWAWGFNFDGQLGDGSL 672

Query: 361 IDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLG 408
           ++++ P  +S L     V V A    +      G+V+ +G+ G G LG
Sbjct: 673 LNRSTPVRVSGLSG--VVSVVAGDYHSLARRSDGTVWAWGYNGEGQLG 718


>gi|110637510|ref|YP_677717.1| alpha-tubulin suppressor [Cytophaga hutchinsonii ATCC 33406]
 gi|110280191|gb|ABG58377.1| alpha-tubulin suppressor [Cytophaga hutchinsonii ATCC 33406]
          Length = 911

 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 92/362 (25%), Positives = 168/362 (46%), Gaps = 20/362 (5%)

Query: 116 ITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           +  G  HTL I SN ++++ G ++ G LG+G  T    +   +   + A  ++VSA  +H
Sbjct: 324 LAAGSNHTLAIKSNGTLWAWGHNVRGNLGNGTATLDPATLP-VQVGTDADWIRVSAGLDH 382

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 234
           +  +  +G ++  G N     G+          ++  A   V    + AG   T  +   
Sbjct: 383 SVALKANGTLWAWGYNVRGQLGYGSGTDKHLPVQIGTAHTWVA---INAGTYHTIGVKAD 439

Query: 235 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 294
           G + T G NT+ QLG G T D+P P SI    +    + IAA  ++ + +  NG ++++G
Sbjct: 440 GSLWTWGDNTNAQLGDGGTADQPVPHSIRTAPD--DWISIAASNAFSMGLKANGTIWTWG 497

Query: 295 SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGA 354
                  G  +    +Q  + Q ++        ++ G  +++AL + G ++ WG  + G 
Sbjct: 498 LNPFETDGQYKNSSPVQTGSDQNWKS-------IATGSNYILALKADGTLWAWGDNFSGQ 550

Query: 355 LGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGV 414
           LG G E  + LP+ + +  + +++   A   ++F +   GS++ +G    G LG    G 
Sbjct: 551 LGDGTEQPRMLPKQIGTATTWVSI-AAASGVQSFGIQADGSLWSWGHNYDGELGL---GT 606

Query: 415 SDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPT 474
           + K L P  + +        I TG+ HT+ +   G L+G+G N + QLG  TL     P 
Sbjct: 607 NLKTLVPTRVGT--GTDWISIKTGVGHTLGIKSDGTLWGWGTNRQGQLGDGTLVNKYVPV 664

Query: 475 EI 476
           ++
Sbjct: 665 QL 666



 Score = 81.6 bits (200), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 69/245 (28%), Positives = 115/245 (46%), Gaps = 16/245 (6%)

Query: 235 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 294
           G +   G N++GQLG G T+DR TP  I    ++ + V +A G SY LA+  +G ++S+G
Sbjct: 138 GELWGWGYNSNGQLGDGTTMDRRTPVKIGI--DI-NWVAVATGSSYTLALKADGTLWSWG 194

Query: 295 SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGA 354
                 LG G   D   P  I T +         S+G    + + ++G ++TWG    G 
Sbjct: 195 KNQRGQLGDGTTIDRHSPVQIGTEQTWTGIAACFSSG----IGIKANGTLWTWGFNNGGE 250

Query: 355 LGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGV 414
           LG G+  +K  P  + + ++ L   V        + VD GS++G+G    G +G  +   
Sbjct: 251 LGIGNNDEKHTPVQVGADQNWLYA-VAGSNHIVALKVD-GSLWGWGLNEAGEIGNGNTVQ 308

Query: 415 SDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPT 474
            D  +R    +       + ++ G  HT+ +   G L+ +G N R  LG+ T    L+P 
Sbjct: 309 QDSPVRVGTDNDW-----TTLAAGSNHTLAIKSNGTLWAWGHNVRGNLGNGT--ATLDPA 361

Query: 475 EIFIQ 479
            + +Q
Sbjct: 362 TLPVQ 366



 Score = 79.7 bits (195), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 79/354 (22%), Positives = 139/354 (39%), Gaps = 22/354 (6%)

Query: 114 MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           + I  G YHT+ + ++ S+++ G +    LG G    Q V  +    P     + ++AS 
Sbjct: 424 VAINAGTYHTIGVKADGSLWTWGDNTNAQLGDGGTADQPVPHSIRTAPD--DWISIAASN 481

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
             +  +  +G ++T G N     G    + P      V+       K +  G N+   L 
Sbjct: 482 AFSMGLKANGTIWTWGLNPFETDGQYKNSSP------VQTGSDQNWKSIATGSNYILALK 535

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
             G +   G N  GQLG G    R  PK I       S+   AA       +  +G ++S
Sbjct: 536 ADGTLWAWGDNFSGQLGDGTEQPRMLPKQIGTATTWVSIA--AASGVQSFGIQADGSLWS 593

Query: 293 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 352
           +G   +  LG G     L P  + T    G   + +  G  H + + S G ++ WG    
Sbjct: 594 WGHNYDGELGLGTNLKTLVPTRVGT----GTDWISIKTGVGHTLGIKSDGTLWGWGTNRQ 649

Query: 353 GALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDR 412
           G LG G  ++K +P  L + +    + +         L   G+++ +G   +G +     
Sbjct: 650 GQLGDGTLVNKYVPVQLGTDRDW--INIAGGTIHNICLKSNGTLWAWGRNNYGQV----- 702

Query: 413 GVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDT 466
           G  + + + R++      +   +   L  +  +   G L+  G N   QLG  T
Sbjct: 703 GTGNLITQDRMVQISAEQNWIDVYASLDQSFAIRADGSLWACGLNSSGQLGDGT 756



 Score = 79.3 bits (194), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 95/407 (23%), Positives = 167/407 (41%), Gaps = 57/407 (14%)

Query: 114 MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           + + TG  +TL L ++ +++S G +  G LG G   T     + +   +      ++A  
Sbjct: 172 VAVATGSSYTLALKADGTLWSWGKNQRGQLGDG---TTIDRHSPVQIGTEQTWTGIAACF 228

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
           +    +  +G ++T G N+    G  + N     P  V A +        AG N    L 
Sbjct: 229 SSGIGIKANGTLWTWGFNNGGELGIGN-NDEKHTPVQVGADQN--WLYAVAGSNHIVALK 285

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
           + G +   G N  G++G+G+T+ + +P  +    +      +AAG ++ LA+  NG +++
Sbjct: 286 VDGSLWGWGLNEAGEIGNGNTVQQDSPVRVGTDNDW---TTLAAGSNHTLAIKSNGTLWA 342

Query: 293 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 352
           +G      LG+G     L P  +          +RVSAG +H VAL ++G ++ WG    
Sbjct: 343 WGHNVRGNLGNGTA--TLDPATLPVQVGTDADWIRVSAGLDHSVALKANGTLWAWGYNVR 400

Query: 353 GALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG------------ 400
           G LG+G   DK LP  + +  +H  V + A    T  +   GS++ +G            
Sbjct: 401 GQLGYGSGTDKHLPVQIGT--AHTWVAINAGTYHTIGVKADGSLWTWGDNTNAQLGDGGT 458

Query: 401 ---------------WMGFG-----SLGFPDRG-VSDKVLRPRILDSLRAH--------- 430
                          W+        S+G    G +    L P   D    +         
Sbjct: 459 ADQPVPHSIRTAPDDWISIAASNAFSMGLKANGTIWTWGLNPFETDGQYKNSSPVQTGSD 518

Query: 431 -HVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 476
            +   I+TG  + + +   G L+ +GDN   QLG  T +  + P +I
Sbjct: 519 QNWKSIATGSNYILALKADGTLWAWGDNFSGQLGDGTEQPRMLPKQI 565



 Score = 49.3 bits (116), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 61/266 (22%), Positives = 116/266 (43%), Gaps = 16/266 (6%)

Query: 101 EHSSDIVETSAGNMQ-ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRIN 158
           ++SS +   S  N + I TG  + L L ++ ++++ G +  G LG G E  + +      
Sbjct: 508 KNSSPVQTGSDQNWKSIATGSNYILALKADGTLWAWGDNFSGQLGDGTEQPRMLP---KQ 564

Query: 159 FPSAAHVVQVSASENHAAFVLQS-GQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVP 217
             +A   V ++A+    +F +Q+ G +++ G N     G   TN     P  V    G  
Sbjct: 565 IGTATTWVSIAAASGVQSFGIQADGSLWSWGHNYDGELG-LGTNLKTLVPTRVGT--GTD 621

Query: 218 CKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAG 277
              +  G+  T  +   G +   G+N  GQLG G  +++  P  +    +    + IA G
Sbjct: 622 WISIKTGVGHTLGIKSDGTLWGWGTNRQGQLGDGTLVNKYVPVQLGTDRDW---INIAGG 678

Query: 278 PSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
             + + +  NG ++++G  +   +G G      Q R +Q    +  + + V A  +   A
Sbjct: 679 TIHNICLKSNGTLWAWGRNNYGQVGTGNL--ITQDRMVQISAEQ--NWIDVYASLDQSFA 734

Query: 338 LDSSGYVYTWGKGYCGALGHGDEIDK 363
           + + G ++  G    G LG G  +D+
Sbjct: 735 IRADGSLWACGLNSSGQLGDGTSVDR 760



 Score = 47.0 bits (110), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 51/205 (24%), Positives = 93/205 (45%), Gaps = 14/205 (6%)

Query: 107 VETSAGNMQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHV 165
           V T    + I TG  HTL I S+ +++  G++  G LG G   T    +  +   +    
Sbjct: 616 VGTGTDWISIKTGVGHTLGIKSDGTLWGWGTNRQGQLGDG---TLVNKYVPVQLGTDRDW 672

Query: 166 VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 225
           + ++    H   +  +G ++  G N+    G   T   I + R+V+         V A L
Sbjct: 673 INIAGGTIHNICLKSNGTLWAWGRNN---YGQVGTGNLITQDRMVQISAEQNWIDVYASL 729

Query: 226 NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 285
           + +  +   G +  CG N+ GQLG G ++DR    ++   ++    + +AAG  + LA+ 
Sbjct: 730 DQSFAIRADGSLWACGLNSSGQLGDGTSVDRAAMVAVGTNQK---WISLAAGNYHTLALP 786

Query: 286 GNGVVYSFGSGSNFCLGHGEQHDEL 310
            N + Y  G+G+ +   +GE  D +
Sbjct: 787 VNRIQYC-GTGTAY---YGELGDHV 807


>gi|332235891|ref|XP_003267138.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein ligase
            HERC1 [Nomascus leucogenys]
          Length = 4855

 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 99/339 (29%), Positives = 161/339 (47%), Gaps = 22/339 (6%)

Query: 115  QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQV---SA 170
            Q+  G+  T +I +N +V +CG    G LG G      V  T I+      V Q+     
Sbjct: 4030 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHV-LTVISALQGFVVTQLVTSCG 4088

Query: 171  SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
            S+ H+  + +SG+VF+ GD      GH +++R   RP      +G    Q++ G   +  
Sbjct: 4089 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPX-----QGEEVVQMSCGFKHSAV 4142

Query: 231  LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSVVQIAAGPSYMLAVTGNG 288
            +T  G + T G+  +G+LG G+T ++  P+ +  LE  ++G   Q+A G ++ LAV+ +G
Sbjct: 4143 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIG---QVACGLNHTLAVSADG 4199

Query: 289  -VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 347
             +V++FG G    LG G    +  P+ I      GI + +V+ G +  VAL   G+VYT+
Sbjct: 4200 SMVWAFGDGDYGKLGLGNSTAKSSPQKIDVL--CGIGIKKVACGTQFSVALTKDGHVYTF 4257

Query: 348  GKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSL 407
            G+     L  G   +   P+ +  L   +   V      T  L   G VY +G    G L
Sbjct: 4258 GQDRLIGLPEGRARNHNRPQQIPVLAGVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQL 4317

Query: 408  GFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT 446
            G    G ++ V  P ++  L+  +V QIS G  H+   T
Sbjct: 4318 GL---GHTNHVREPTLVTGLQGKNVRQISAGRCHSAAWT 4353



 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 90/315 (28%), Positives = 144/315 (45%), Gaps = 25/315 (7%)

Query: 160 PSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTN------RPIFRPRLVEAL 213
           PS +    + A +     +   G V  CG  S    G  D+N      +  F P    ++
Sbjct: 400 PSFSDAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPH--RSI 457

Query: 214 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
           K V   + + G   T   T  G V + G   +G+LGHG++  +  PK I    +   VV 
Sbjct: 458 KKVSSSKGSDG--HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVC 515

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           ++AG  +  AVT +G +Y++G G    LGHG+ +     R I T  +   +V  VS G  
Sbjct: 516 VSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNS----RNIPTLVKDISNVGEVSCGSS 571

Query: 334 HVVALDSSGY-VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVD 392
           H +AL   G  V+++G G  G LGHGD      P+ + +L+     +VCA  + +  L  
Sbjct: 572 HTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTS 631

Query: 393 TGSVYGFG---WMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRG 449
           TG VY +G    +G GS            LRP++++ L A  +  +S G  H + ++   
Sbjct: 632 TGQVYAWGCGACLGCGS-------SEATALRPKLIEELAATRIVDVSIGDSHCLALSHDN 684

Query: 450 RLFGFGDNERAQLGH 464
            ++ +G+N   Q G 
Sbjct: 685 EVYAWGNNSMGQCGQ 699



 Score = 98.6 bits (244), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 91/266 (34%), Positives = 128/266 (48%), Gaps = 14/266 (5%)

Query: 122 HTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
           HTL   +   VFS G    G LGHG  +TQ              VV VSA   H+A V +
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528

Query: 181 SGQVFTCGDNSSFCCGHRDTN-RPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH-VH 238
            G+++T G+      GH D+N R I  P LV+ +  V   +V+ G + T  L+  G  V 
Sbjct: 529 DGELYTWGEGDFGRLGHGDSNSRNI--PTLVKDISNV--GEVSCGSSHTIALSKDGRTVW 584

Query: 239 TCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
           + G   +G+LGHGDT     PK I  L+ +  + ++ AG    LA+T  G VY++G G+ 
Sbjct: 585 SFGGGDNGKLGHGDTNRVYKPKVIEALQGM-FIRKVCAGSQSSLALTSTGQVYAWGCGA- 642

Query: 299 FCLGHG-EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 357
            CLG G  +   L+P+ I+        +V VS GD H +AL     VY WG    G  G 
Sbjct: 643 -CLGCGSSEATALRPKLIEEL--AATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQ 699

Query: 358 GDEIDK-TLPEPLSSLKSHLAVQVCA 382
           G+     T P+ +S L      Q+ A
Sbjct: 700 GNSTGPITKPKKVSGLDGIAIQQISA 725



 Score = 96.7 bits (239), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 80/284 (28%), Positives = 130/284 (45%), Gaps = 19/284 (6%)

Query: 198  RDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRP 257
            R+   P   P   +A      +QV  G N T  +   G V  CG  ++G+LG G++ D  
Sbjct: 4014 RNVMVPAAAPSFSQA------QQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLH 4067

Query: 258  TPKSIAPLE--EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAI 315
                I+ L+   V  +V       + +A+T +G V+S+G G    LGHG    + +P   
Sbjct: 4068 VLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPX-- 4125

Query: 316  QTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSH 375
                 +G  VV++S G +H   + S G ++T+G G  G LG G+  +K LPE +++L+ +
Sbjct: 4126 -----QGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGY 4180

Query: 376  LAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQ 434
               QV C       V  D   V+ FG   +G LG    G S     P+ +D L    + +
Sbjct: 4181 QIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGL---GNSTAKSSPQKIDVLCGIGIKK 4237

Query: 435  ISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFI 478
            ++ G   +V +T  G ++ FG +    L     R    P +I +
Sbjct: 4238 VACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPV 4281



 Score = 91.7 bits (226), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 85/320 (26%), Positives = 145/320 (45%), Gaps = 18/320 (5%)

Query: 160  PSAAHVVQVSASENHAAFVLQS-GQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPC 218
            PS +   QV   +N   FV+Q+ G V  CG+ S    G  +++  +    ++ AL+G   
Sbjct: 4023 PSFSQAQQVICGQN-CTFVIQANGTVLACGEGSYGRLGQGNSDD-LHVLTVISALQGFVV 4080

Query: 219  KQVTAGLNFTGF---LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA 275
             Q+       G    LT  G V + G   +G+LGHG++  +  P       +   VVQ++
Sbjct: 4081 TQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPX------QGEEVVQMS 4134

Query: 276  AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHV 335
             G  +   VT +G +++FG+G    LG G   ++  P  +     +G  + +V+ G  H 
Sbjct: 4135 CGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTAL--EGYQIGQVACGLNHT 4192

Query: 336  VALDSSG-YVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 394
            +A+ + G  V+ +G G  G LG G+   K+ P+ +  L      +V    + +  L   G
Sbjct: 4193 LAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDG 4252

Query: 395  SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 454
             VY FG      +G P+ G +    RP+ +  L    +  ++ G  HT+ +   G ++ +
Sbjct: 4253 HVYTFGQDRL--IGLPE-GRARNHNRPQQIPVLAGVIIEDVAVGAEHTLALASNGDVYAW 4309

Query: 455  GDNERAQLGHDTLRGCLEPT 474
            G N   QLG        EPT
Sbjct: 4310 GSNSEGQLGLGHTNHVREPT 4329



 Score = 59.7 bits (143), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 49/180 (27%), Positives = 82/180 (45%), Gaps = 13/180 (7%)

Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 349
           VY +GS S+  L  G Q   LQP+   +F         + AG      + + G V   GK
Sbjct: 374 VYVWGSNSSHQLVEGTQEKILQPKLAPSFS----DAQTIEAGQYCTFVISTDGSVRACGK 429

Query: 350 GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKR----KTFVLVDTGSVYGFGWMGFG 405
           G  G LG GD  +++  + L + + H +++  +  +     T      G V+ +G   +G
Sbjct: 430 GSYGRLGLGDSNNQSTLKKL-TFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYG 488

Query: 406 SLGFPDRGVSDKVLRPRILD-SLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 464
            LG    G S     P+++   L+   V  +S G  H+  VT+ G L+ +G+ +  +LGH
Sbjct: 489 KLG---HGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGH 545



 Score = 49.3 bits (116), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 29/100 (29%), Positives = 48/100 (48%), Gaps = 2/100 (2%)

Query: 125 LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQV 184
           L S   V++ G   C  LG G      +    I   +A  +V VS  ++H   +    +V
Sbjct: 629 LTSTGQVYAWGCGAC--LGCGSSEATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEV 686

Query: 185 FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           +  G+NS   CG  ++  PI +P+ V  L G+  +Q++AG
Sbjct: 687 YAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAG 726



 Score = 48.5 bits (114), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 37/124 (29%), Positives = 61/124 (49%), Gaps = 9/124 (7%)

Query: 344  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 403
            VY WG G  G L    E  + +  P ++     A QV   +  TFV+   G+V   G   
Sbjct: 3998 VYLWGAGRHGQLA---EAGRNVMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGS 4054

Query: 404  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGL---YHTVVVTDRGRLFGFGDNERA 460
            +G LG   +G SD +    ++ +L+   V+Q+ T      H++ +T+ G +F +GD +  
Sbjct: 4055 YGRLG---QGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYG 4111

Query: 461  QLGH 464
            +LGH
Sbjct: 4112 KLGH 4115


>gi|282722852|gb|ADA84472.1| retinitis pigmentosa GTPase regulator protein 2 ORF15 [Danio rerio]
          Length = 1413

 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 91/307 (29%), Positives = 144/307 (46%), Gaps = 25/307 (8%)

Query: 166 VQVSASENHAAFVLQSGQVFTCGDNS--SFCCGHRDTNRPIFRPRLVEALKGVPCKQVTA 223
           +++S  + H A V ++G++F  G N+      G + T   + +P  V+AL+    K    
Sbjct: 39  LRISCGDEHTALVTENGKLFMFGSNNWGQLGLGTKTT---VNKPTCVKALRSERVKLTAC 95

Query: 224 GLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
           G   T   T RG+++ CG N  GQLG GD  DR +   +    + G +  +AAG +   A
Sbjct: 96  GRTHTLVFTSRGNLYACGGNNEGQLGLGDCNDRTSFHLVEFFNKQGPIKMLAAGSNTSAA 155

Query: 284 VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 343
           +T +G +Y  G  S   +G G++ + L P+ +   +R    V  VS G  H   +   G 
Sbjct: 156 LTQDGRLYMRGDNSEGQIGLGKESNALTPQEVSVGKR----VFWVSCGYYHSAFVTVDGA 211

Query: 344 VYTWGKGYCGALGHGDE--IDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGW 401
           +YT+G+   G LG   E   +  +P+ ++ +   + VQV      T  L +   VY FG 
Sbjct: 212 LYTFGEKDSGKLGLSTEKLANHKVPQQVTDIPDRV-VQVACGGGHTVALTE-NEVYSFGL 269

Query: 402 MGFGSLG-----FPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGD 456
             FG LG     F  R        PR+++  R   V   + G  HT ++TD G L+ FGD
Sbjct: 270 GQFGQLGHGTFIFESR-------LPRVVEHFRKGRVKHAACGENHTALITDNGLLYTFGD 322

Query: 457 NERAQLG 463
               +LG
Sbjct: 323 GRHGKLG 329



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 101/346 (29%), Positives = 157/346 (45%), Gaps = 33/346 (9%)

Query: 114 MQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETT----QCVSFTRINFPSAAHVVQV 168
           ++I+ G  HT L++ N  +F  GS+  G LG G +TT     CV   R     +  V   
Sbjct: 39  LRISCGDEHTALVTENGKLFMFGSNNWGQLGLGTKTTVNKPTCVKALR-----SERVKLT 93

Query: 169 SASENHAAFVLQSGQVFTCGDNSSFCCGHRDTN-RPIFRPRLVEAL-KGVPCKQVTAGLN 226
           +    H       G ++ CG N+    G  D N R  F   LVE   K  P K + AG N
Sbjct: 94  ACGRTHTLVFTSRGNLYACGGNNEGQLGLGDCNDRTSF--HLVEFFNKQGPIKMLAAGSN 151

Query: 227 FTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS-VVQIAAGPSYMLAVT 285
            +  LT  G ++  G N+ GQ+G G   +  TP+ ++    VG  V  ++ G  +   VT
Sbjct: 152 TSAALTQDGRLYMRGDNSEGQIGLGKESNALTPQEVS----VGKRVFWVSCGYYHSAFVT 207

Query: 286 GNGVVYSFGSGSNFCLGHGEQH--DELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 343
            +G +Y+FG   +  LG   +   +   P+ +     +   VV+V+ G  H VAL +   
Sbjct: 208 VDGALYTFGEKDSGKLGLSTEKLANHKVPQQVTDIPDR---VVQVACGGGHTVAL-TENE 263

Query: 344 VYTWGKGYCGALGHGDEI-DKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWM 402
           VY++G G  G LGHG  I +  LP  +   +          +  T ++ D G +Y FG  
Sbjct: 264 VYSFGLGQFGQLGHGTFIFESRLPRVVEHFRKGRVKHAACGENHTALITDNGLLYTFGDG 323

Query: 403 GFGSLGFPDRGVSDK---VLRPRILDSLRAHHVSQISTGLYHTVVV 445
             G LG  +   +++    L PR LD    +HV  ++ G  H +V+
Sbjct: 324 RHGKLGLGEENFTNQFKPTLCPRFLD----YHVHSVTCGGCHMLVL 365



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 49/192 (25%), Positives = 79/192 (41%), Gaps = 16/192 (8%)

Query: 288 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 347
           G V++FG  S F              A   F  K    +R+S GDEH   +  +G ++ +
Sbjct: 13  GAVFTFGK-SKFA-----------DNAPSKFWLKNDVPLRISCGDEHTALVTENGKLFMF 60

Query: 348 GKGYCGALGHGDEIDKTLPEPLSSLKSH-LAVQVCARKRKTFVLVDTGSVYGFGWMGFGS 406
           G    G LG G +     P  + +L+S  + +  C R   T V    G++Y  G    G 
Sbjct: 61  GSNNWGQLGLGTKTTVNKPTCVKALRSERVKLTACGRTH-TLVFTSRGNLYACGGNNEGQ 119

Query: 407 LGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDT 466
           LG  D   +D+     +    +   +  ++ G   +  +T  GRL+  GDN   Q+G   
Sbjct: 120 LGLGD--CNDRTSFHLVEFFNKQGPIKMLAAGSNTSAALTQDGRLYMRGDNSEGQIGLGK 177

Query: 467 LRGCLEPTEIFI 478
               L P E+ +
Sbjct: 178 ESNALTPQEVSV 189



 Score = 53.5 bits (127), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 52/198 (26%), Positives = 85/198 (42%), Gaps = 8/198 (4%)

Query: 272 VQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG 331
           ++I+ G  +   VT NG ++ FGS +   LG G +    +P  ++  R + + +   + G
Sbjct: 39  LRISCGDEHTALVTENGKLFMFGSNNWGQLGLGTKTTVNKPTCVKALRSERVKLT--ACG 96

Query: 332 DEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKT-FVL 390
             H +   S G +Y  G    G LG GD  D+T    +        +++ A    T   L
Sbjct: 97  RTHTLVFTSRGNLYACGGNNEGQLGLGDCNDRTSFHLVEFFNKQGPIKMLAAGSNTSAAL 156

Query: 391 VDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGR 450
              G +Y  G    G +G    G     L P+ +       V  +S G YH+  VT  G 
Sbjct: 157 TQDGRLYMRGDNSEGQIGL---GKESNALTPQEVSV--GKRVFWVSCGYYHSAFVTVDGA 211

Query: 451 LFGFGDNERAQLGHDTLR 468
           L+ FG+ +  +LG  T +
Sbjct: 212 LYTFGEKDSGKLGLSTEK 229


>gi|405954130|gb|EKC21653.1| Putative E3 ubiquitin-protein ligase HERC1 [Crassostrea gigas]
          Length = 2154

 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 97/330 (29%), Positives = 158/330 (47%), Gaps = 20/330 (6%)

Query: 115  QITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSAS-- 171
            QI  G+  T ++ N+ +V +CG    G LG G  +    S T I+      V Q++ S  
Sbjct: 1835 QIVCGQNCTFVVQNNGTVLACGEGSYGRLGQG-NSDDLHSLTAISSIQGFVVTQLATSVG 1893

Query: 172  -ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
             + H   V +SG+VF+ GD      GH +++R   RPR +EAL+G    Q++ G   +  
Sbjct: 1894 SDGHTLAVTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVIQLSCGFKHSAV 1952

Query: 231  LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSVVQIAAGPSYMLAVTGNG 288
            +T  G + T G+  +G+LG G T ++  P  +  LE  ++G V   A G ++ L V+ +G
Sbjct: 1953 VTADGKLFTFGNGDYGRLGLGTTTNKKVPTRVVALESHQIGYV---ACGLNHTLCVSADG 2009

Query: 289  V-VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 347
              V++FG G    LG G    +  P  I+    +G  + +V+ G +  VAL   G V+TW
Sbjct: 2010 TNVWAFGDGDFGKLGQGNTVGKHLPTKIKAL--QGHVIKKVACGTQFSVALSKYGKVFTW 2067

Query: 348  GKGYCGALGHGDEI--DKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFG 405
            G+     +G  D        P+ ++SL  +    V      T VL   G V+G+G    G
Sbjct: 2068 GQERL--IGQPDTRGGSNCQPQEVASLSGYFIEDVVCGAEHTLVLTSDGDVWGWGSNSEG 2125

Query: 406  SLGFPDRGVSDKVLRPRILDSLRAHHVSQI 435
             LG      +  V  P+++  L   ++ Q+
Sbjct: 2126 QLGL--GHTNSPVREPQLVPCLTGKNIRQV 2153



 Score =  102 bits (254), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 83/316 (26%), Positives = 151/316 (47%), Gaps = 13/316 (4%)

Query: 153  SFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEA 212
            +F  +  PS +   Q+   +N    V  +G V  CG+ S    G  +++  +     + +
Sbjct: 1821 AFVPVRVPSFSCSQQIVCGQNCTFVVQNNGTVLACGEGSYGRLGQGNSDD-LHSLTAISS 1879

Query: 213  LKGVPCKQVTAGLNFTGF---LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG 269
            ++G    Q+   +   G    +T  G V + G   +G+LGHG++  +  P+ I  L+   
Sbjct: 1880 IQGFVVTQLATSVGSDGHTLAVTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQG-E 1938

Query: 270  SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS 329
             V+Q++ G  +   VT +G +++FG+G    LG G   ++  P  +       I  V  +
Sbjct: 1939 EVIQLSCGFKHSAVVTADGKLFTFGNGDYGRLGLGTTTNKKVPTRVVALESHQIGYV--A 1996

Query: 330  AGDEHVVALDSSGY-VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTF 388
             G  H + + + G  V+ +G G  G LG G+ + K LP  + +L+ H+  +V    + + 
Sbjct: 1997 CGLNHTLCVSADGTNVWAFGDGDFGKLGQGNTVGKHLPTKIKALQGHVIKKVACGTQFSV 2056

Query: 389  VLVDTGSVYGFGWMGFGSLGFPD-RGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTD 447
             L   G V+ +G      +G PD RG S+   +P+ + SL  + +  +  G  HT+V+T 
Sbjct: 2057 ALSKYGKVFTWGQERL--IGQPDTRGGSN--CQPQEVASLSGYFIEDVVCGAEHTLVLTS 2112

Query: 448  RGRLFGFGDNERAQLG 463
             G ++G+G N   QLG
Sbjct: 2113 DGDVWGWGSNSEGQLG 2128



 Score = 86.3 bits (212), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 61/206 (29%), Positives = 98/206 (47%), Gaps = 5/206 (2%)

Query: 273  QIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG- 331
            QI  G +    V  NG V + G GS   LG G   D     AI + +   +  +  S G 
Sbjct: 1835 QIVCGQNCTFVVQNNGTVLACGEGSYGRLGQGNSDDLHSLTAISSIQGFVVTQLATSVGS 1894

Query: 332  DEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 391
            D H +A+  SG V++WG G  G LGHG+   +  P  + +L+    +Q+    + + V+ 
Sbjct: 1895 DGHTLAVTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVIQLSCGFKHSAVVT 1954

Query: 392  DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRG-R 450
              G ++ FG   +G LG    G +     P  + +L +H +  ++ GL HT+ V+  G  
Sbjct: 1955 ADGKLFTFGNGDYGRLGL---GTTTNKKVPTRVVALESHQIGYVACGLNHTLCVSADGTN 2011

Query: 451  LFGFGDNERAQLGHDTLRGCLEPTEI 476
            ++ FGD +  +LG     G   PT+I
Sbjct: 2012 VWAFGDGDFGKLGQGNTVGKHLPTKI 2037



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 46/157 (29%), Positives = 76/157 (48%), Gaps = 6/157 (3%)

Query: 327  RVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCAR--- 383
            ++  G      + ++G V   G+G  G LG G+  D      +SS++  +  Q+      
Sbjct: 1835 QIVCGQNCTFVVQNNGTVLACGEGSYGRLGQGNSDDLHSLTAISSIQGFVVTQLATSVGS 1894

Query: 384  KRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV 443
               T  + ++G V+ +G   +G LG    G SD+  RPR +++L+   V Q+S G  H+ 
Sbjct: 1895 DGHTLAVTESGEVFSWGDGDYGKLG---HGNSDRQRRPRQIEALQGEEVIQLSCGFKHSA 1951

Query: 444  VVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQE 480
            VVT  G+LF FG+ +  +LG  T      PT +   E
Sbjct: 1952 VVTADGKLFTFGNGDYGRLGLGTTTNKKVPTRVVALE 1988


>gi|348525468|ref|XP_003450244.1| PREDICTED: RCC1 and BTB domain-containing protein 2-like
           [Oreochromis niloticus]
          Length = 536

 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 80/275 (29%), Positives = 128/275 (46%), Gaps = 5/275 (1%)

Query: 128 NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS-ASENHAAFVLQSGQVFT 186
           N  VF+ G++  G LG G +    +   RI+      +V +S  +  H       G+V+ 
Sbjct: 49  NDEVFALGTNCSGCLGLG-DLQSTIEPRRIDVLCGKKIVSLSYGTGPHVVIATADGEVYA 107

Query: 187 CGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHG 246
            G N     G+  TN  +    +   L      +V  G + T  LT  G V+  G N  G
Sbjct: 108 WGHNGYSQLGNGTTNHGLTPALVSTNLLSKRVTEVACGSHHTIALTTDGEVYAWGYNNSG 167

Query: 247 QLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ 306
           Q+G G T ++PTP+ ++   +   VV IA G    +AV  NG +Y +G   N  LG G  
Sbjct: 168 QVGSGSTANQPTPRRVSSCLQNKVVVNIACGQLCSMAVLDNGEIYGWGYNCNGQLGLGNN 227

Query: 307 HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP 366
            ++  P  I     +G+++V+V+ G  H +AL   G+VY WG    G LG G++ ++ LP
Sbjct: 228 GNQQTPCRIAAL--QGVNIVQVACGYAHTLALTDEGFVYAWGANSYGQLGTGNKSNQALP 285

Query: 367 EPLSSLKSHLA-VQVCARKRKTFVLVDTGSVYGFG 400
            P+++ K  +  V  C     +     +G V  +G
Sbjct: 286 TPINTDKERIVEVAACHTSHTSAAKTQSGQVLMWG 320



 Score =  101 bits (252), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 72/250 (28%), Positives = 120/250 (48%), Gaps = 9/250 (3%)

Query: 230 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGSVVQIAAGPSYMLAVTGN 287
           ++T+   V   G+N  G LG GD      P+ I  L  +++ S+     GP  ++A T +
Sbjct: 45  YVTVNDEVFALGTNCSGCLGLGDLQSTIEPRRIDVLCGKKIVSL-SYGTGPHVVIA-TAD 102

Query: 288 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 347
           G VY++G      LG+G  +  L P  + T       V  V+ G  H +AL + G VY W
Sbjct: 103 GEVYAWGHNGYSQLGNGTTNHGLTPALVST-NLLSKRVTEVACGSHHTIALTTDGEVYAW 161

Query: 348 GKGYCGALGHGDEIDKTLPEPLSS-LKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGS 406
           G    G +G G   ++  P  +SS L++ + V +   +  +  ++D G +YG+G+   G 
Sbjct: 162 GYNNSGQVGSGSTANQPTPRRVSSCLQNKVVVNIACGQLCSMAVLDNGEIYGWGYNCNGQ 221

Query: 407 LGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDT 466
           LG  + G      R   + +L+  ++ Q++ G  HT+ +TD G ++ +G N   QLG   
Sbjct: 222 LGLGNNGNQQTPCR---IAALQGVNIVQVACGYAHTLALTDEGFVYAWGANSYGQLGTGN 278

Query: 467 LRGCLEPTEI 476
                 PT I
Sbjct: 279 KSNQALPTPI 288



 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 81/291 (27%), Positives = 137/291 (47%), Gaps = 13/291 (4%)

Query: 170 ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
           ++ N A +V  + +VF  G N S C G  D    I  PR ++ L G     ++ G   TG
Sbjct: 38  SAANEALYVTVNDEVFALGTNCSGCLGLGDLQSTI-EPRRIDVLCGKKIVSLSYG---TG 93

Query: 230 ----FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 285
                 T  G V+  G N + QLG+G T    TP  ++       V ++A G  + +A+T
Sbjct: 94  PHVVIATADGEVYAWGHNGYSQLGNGTTNHGLTPALVSTNLLSKRVTEVACGSHHTIALT 153

Query: 286 GNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVY 345
            +G VY++G  ++  +G G   ++  PR + +  +  + VV ++ G    +A+  +G +Y
Sbjct: 154 TDGEVYAWGYNNSGQVGSGSTANQPTPRRVSSCLQNKV-VVNIACGQLCSMAVLDNGEIY 212

Query: 346 TWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFG 405
            WG    G LG G+  ++  P  +++L+    VQV      T  L D G VY +G   +G
Sbjct: 213 GWGYNCNGQLGLGNNGNQQTPCRIAALQGVNIVQVACGYAHTLALTDEGFVYAWGANSYG 272

Query: 406 SLGFPDRGVSDKVL-RPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFG 455
            LG  ++  S++ L  P   D  R   V+   T  + +   T  G++  +G
Sbjct: 273 QLGTGNK--SNQALPTPINTDKERIVEVAACHTS-HTSAAKTQSGQVLMWG 320


>gi|326677630|ref|XP_003200872.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Danio
           rerio]
          Length = 4647

 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 100/343 (29%), Positives = 155/343 (45%), Gaps = 20/343 (5%)

Query: 116 ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFP--SAAHVVQVSASE 172
           I  G+Y T  +S + +V +CG    G LG G    Q +    +  P  +   V     S+
Sbjct: 406 IEAGQYCTFSVSADGAVKACGKGSYGRLGLGDSNNQSMPKKLVLEPPRTMRKVSSSKGSD 465

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVE-ALKGVPCKQVTAGLNFTGFL 231
            H   V   G+VF+ GD      GH ++    + P++++  L G     V+AG   +  +
Sbjct: 466 GHTLAVTAEGEVFSWGDGDYGKLGHGNSATQKY-PKIIQGPLLGKVVVCVSAGYRHSAAV 524

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG-VV 290
           T  G ++T G    G+LGH D+  R  P  +  +  VG   Q+A G S+ +AV  +G +V
Sbjct: 525 TNDGELYTWGEGDFGRLGHSDSHSRNVPTLVKDISGVG---QVACGSSHTIAVAQDGRIV 581

Query: 291 YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKG 350
           +SFG G N  LGHG+ +   +P+ I+     G  + +V AG +  +AL S+G V+ WG G
Sbjct: 582 WSFGGGDNGKLGHGDTNRVYRPKVIEALH--GFIIRKVCAGSQSSLALTSAGQVFAWGCG 639

Query: 351 YCGALGHGDEIDKTL-PEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGF 409
            C  LG G     +L P  +  L     + +         L     V+ +G    G  G 
Sbjct: 640 SC--LGCGSSETTSLRPRLIEELSITKIIDISCGDSHCLALSHENEVFAWGNNAMGQCG- 696

Query: 410 PDRGVSDKVLRPRILDSLRAHHVSQISTGLYH----TVVVTDR 448
                S  V +P+ +  L    + QI+ G  H    T V TDR
Sbjct: 697 -QGHTSTPVTKPKKVIGLEGVSIQQITAGTSHSLAWTAVPTDR 738



 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 82/274 (29%), Positives = 130/274 (47%), Gaps = 10/274 (3%)

Query: 184 VFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 243
           V+  G NSS       T   I +P+L +       + + AG   T  ++  G V  CG  
Sbjct: 372 VYVWGSNSSHQLAE-GTLEKILQPKLAQGFSDA--QMIEAGQYCTFSVSADGAVKACGKG 428

Query: 244 THGQLGHGDTLDRPTPKSIA--PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCL 301
           ++G+LG GD+ ++  PK +   P   +  V        + LAVT  G V+S+G G    L
Sbjct: 429 SYGRLGLGDSNNQSMPKKLVLEPPRTMRKVSSSKGSDGHTLAVTAEGEVFSWGDGDYGKL 488

Query: 302 GHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEI 361
           GHG    +  P+ IQ     G  VV VSAG  H  A+ + G +YTWG+G  G LGH D  
Sbjct: 489 GHGNSATQKYPKIIQG-PLLGKVVVCVSAGYRHSAAVTNDGELYTWGEGDFGRLGHSDSH 547

Query: 362 DKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRP 421
            + +P  +  + S +    C       V  D   V+ FG    G LG    G +++V RP
Sbjct: 548 SRNVPTLVKDI-SGVGQVACGSSHTIAVAQDGRIVWSFGGGDNGKLG---HGDTNRVYRP 603

Query: 422 RILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFG 455
           +++++L    + ++  G   ++ +T  G++F +G
Sbjct: 604 KVIEALHGFIIRKVCAGSQSSLALTSAGQVFAWG 637



 Score =  102 bits (254), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 86/293 (29%), Positives = 137/293 (46%), Gaps = 25/293 (8%)

Query: 182 GQVFTCGDNSSFCCGHRDTNRPIFRPRLV----EALKGVPCKQVTAGLNFTGFLTIRGHV 237
           G V  CG  S    G  D+N      +LV      ++ V   + + G   T  +T  G V
Sbjct: 420 GAVKACGKGSYGRLGLGDSNNQSMPKKLVLEPPRTMRKVSSSKGSDG--HTLAVTAEGEV 477

Query: 238 HTCGSNTHGQLGHGDTLDRPTPKSI-APLEEVGSVVQ-IAAGPSYMLAVTGNGVVYSFGS 295
            + G   +G+LGHG++  +  PK I  PL  +G VV  ++AG  +  AVT +G +Y++G 
Sbjct: 478 FSWGDGDYGKLGHGNSATQKYPKIIQGPL--LGKVVVCVSAGYRHSAAVTNDGELYTWGE 535

Query: 296 GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG-YVYTWGKGYCGA 354
           G    LGH + H     R + T  +    V +V+ G  H +A+   G  V+++G G  G 
Sbjct: 536 GDFGRLGHSDSHS----RNVPTLVKDISGVGQVACGSSHTIAVAQDGRIVWSFGGGDNGK 591

Query: 355 LGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGW---MGFGSLGFPD 411
           LGHGD      P+ + +L   +  +VCA  + +  L   G V+ +G    +G GS     
Sbjct: 592 LGHGDTNRVYRPKVIEALHGFIIRKVCAGSQSSLALTSAGQVFAWGCGSCLGCGS----- 646

Query: 412 RGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 464
                  LRPR+++ L    +  IS G  H + ++    +F +G+N   Q G 
Sbjct: 647 --SETTSLRPRLIEELSITKIIDISCGDSHCLALSHENEVFAWGNNAMGQCGQ 697



 Score = 92.8 bits (229), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 71/263 (26%), Positives = 121/263 (46%), Gaps = 36/263 (13%)

Query: 203  PIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSI 262
            P   P L +       +QV  G N T  +   G V   G  ++G+LG G++ D  TP  I
Sbjct: 3883 PTLAPSLSQT------QQVVCGQNCTFLVQANGTVLAVGEGSYGRLGQGNSDDLYTPTII 3936

Query: 263  APLE--EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRR 320
            + L+   V  +V       + LA+T  G V+S+G G    LGHG    + +P+ I+    
Sbjct: 3937 SALQGYVVTQLVTSYGSDGHSLALTETGEVFSWGDGDYGKLGHGNSERQRRPKQIEGL-- 3994

Query: 321  KGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQV 380
            +G  VV+++ G +H   + + G ++T+G G  G LG     +K +PE +++L  H     
Sbjct: 3995 QGEEVVQLACGFKHSAVVTADGKLFTFGSGDSGRLGQRSTSNKMIPERVTALDGHH---- 4050

Query: 381  CARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLY 440
                                 +G   +G PD  + +   RP+I+ +L    +  I+ G  
Sbjct: 4051 ---------------------IGQRLIGLPDAMLKNHN-RPQIIPALEGVFIEDIAVGCE 4088

Query: 441  HTVVVTDRGRLFGFGDNERAQLG 463
            H + +++ G ++ +G N  AQLG
Sbjct: 4089 HILALSNTGDVYAWGCNCEAQLG 4111



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 52/194 (26%), Positives = 89/194 (45%), Gaps = 11/194 (5%)

Query: 286  GNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVY 345
            G   VY +G+G      HG+  D     ++ T         +V  G      + ++G V 
Sbjct: 3858 GKSEVYLWGNGR-----HGQLADAGTSASVPTLAPSLSQTQQVVCGQNCTFLVQANGTVL 3912

Query: 346  TWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCAR---KRKTFVLVDTGSVYGFGWM 402
              G+G  G LG G+  D   P  +S+L+ ++  Q+         +  L +TG V+ +G  
Sbjct: 3913 AVGEGSYGRLGQGNSDDLYTPTIISALQGYVVTQLVTSYGSDGHSLALTETGEVFSWGDG 3972

Query: 403  GFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQL 462
             +G LG    G S++  RP+ ++ L+   V Q++ G  H+ VVT  G+LF FG  +  +L
Sbjct: 3973 DYGKLG---HGNSERQRRPKQIEGLQGEEVVQLACGFKHSAVVTADGKLFTFGSGDSGRL 4029

Query: 463  GHDTLRGCLEPTEI 476
            G  +    + P  +
Sbjct: 4030 GQRSTSNKMIPERV 4043



 Score = 68.2 bits (165), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 65/258 (25%), Positives = 116/258 (44%), Gaps = 36/258 (13%)

Query: 115  QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSAS-- 171
            Q+  G+  T L+ +N +V + G    G LG G  +    + T I+      V Q+  S  
Sbjct: 3894 QVVCGQNCTFLVQANGTVLAVGEGSYGRLGQG-NSDDLYTPTIISALQGYVVTQLVTSYG 3952

Query: 172  -ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
             + H+  + ++G+VF+ GD      GH ++ R   RP+ +E L+G    Q+  G   +  
Sbjct: 3953 SDGHSLALTETGEVFSWGDGDYGKLGHGNSERQ-RRPKQIEGLQGEEVVQLACGFKHSAV 4011

Query: 231  LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 290
            +T  G + T GS   G+LG   T ++  P+ +  L+      ++   P  ML        
Sbjct: 4012 VTADGKLFTFGSGDSGRLGQRSTSNKMIPERVTALDGHHIGQRLIGLPDAML-------- 4063

Query: 291  YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKG 350
                          + H+  +P+ I     +G+ +  ++ G EH++AL ++G VY WG  
Sbjct: 4064 --------------KNHN--RPQIIPAL--EGVFIEDIAVGCEHILALSNTGDVYAWGCN 4105

Query: 351  YCGA---LGHGDEIDKTL 365
             C A   LGH + + + +
Sbjct: 4106 -CEAQLGLGHSNPVKEPI 4122



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 44/148 (29%), Positives = 69/148 (46%), Gaps = 9/148 (6%)

Query: 344  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 403
            VY WG G  G L        ++P    SL      QV   +  TF++   G+V   G   
Sbjct: 3862 VYLWGNGRHGQLADAG-TSASVPTLAPSLSQ--TQQVVCGQNCTFLVQANGTVLAVGEGS 3918

Query: 404  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLY---HTVVVTDRGRLFGFGDNERA 460
            +G LG   +G SD +  P I+ +L+ + V+Q+ T      H++ +T+ G +F +GD +  
Sbjct: 3919 YGRLG---QGNSDDLYTPTIISALQGYVVTQLVTSYGSDGHSLALTETGEVFSWGDGDYG 3975

Query: 461  QLGHDTLRGCLEPTEIFIQEMEEDTGLA 488
            +LGH        P +I   + EE   LA
Sbjct: 3976 KLGHGNSERQRRPKQIEGLQGEEVVQLA 4003



 Score = 48.1 bits (113), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 64/261 (24%), Positives = 100/261 (38%), Gaps = 38/261 (14%)

Query: 122  HTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
            H+L ++ +  VFS G    G LGHG    Q     +I       VVQ++    H+A V  
Sbjct: 3956 HSLALTETGEVFSWGDGDYGKLGHGNSERQ-RRPKQIEGLQGEEVVQLACGFKHSAVVTA 4014

Query: 181  SGQVFTCGDNSSFCCGHRDTNRPIF----------------------------RPRLVEA 212
             G++FT G   S   G R T+  +                             RP+++ A
Sbjct: 4015 DGKLFTFGSGDSGRLGQRSTSNKMIPERVTALDGHHIGQRLIGLPDAMLKNHNRPQIIPA 4074

Query: 213  LKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV 272
            L+GV  + +  G      L+  G V+  G N   QLG G +     P  +  L+   ++ 
Sbjct: 4075 LEGVFIEDIAVGCEHILALSNTGDVYAWGCNCEAQLGLGHSNPVKEPILVTTLQG-KNIR 4133

Query: 273  QIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGE----QHDELQ---PRAIQTFRRKGIHV 325
            QI+AG  +  A T   +       S   LG  +    Q++ L+   P  + T  R   H 
Sbjct: 4134 QISAGRCHSSAWTTPALSTRASGCSGIQLGLPQSVPPQYNALKDCSPEVLNTRLRVLYHF 4193

Query: 326  VRVSAGDEHVVALDSSGYVYT 346
              +      ++ LD    V T
Sbjct: 4194 SDLMYKSWRLLNLDPRSQVST 4214



 Score = 39.7 bits (91), Expect = 3.5,   Method: Compositional matrix adjust.
 Identities = 36/122 (29%), Positives = 54/122 (44%), Gaps = 4/122 (3%)

Query: 344 VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 403
           VY WG      L  G  ++K L   L+   S  A  + A +  TF +   G+V   G   
Sbjct: 372 VYVWGSNSSHQLAEGT-LEKILQPKLAQGFSD-AQMIEAGQYCTFSVSADGAVKACGKGS 429

Query: 404 FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLY-HTVVVTDRGRLFGFGDNERAQL 462
           +G LG  D   +  + +  +L+  R       S G   HT+ VT  G +F +GD +  +L
Sbjct: 430 YGRLGLGDSN-NQSMPKKLVLEPPRTMRKVSSSKGSDGHTLAVTAEGEVFSWGDGDYGKL 488

Query: 463 GH 464
           GH
Sbjct: 489 GH 490


>gi|310819121|ref|YP_003951479.1| regulator of chromosome condensation-like protein [Stigmatella
           aurantiaca DW4/3-1]
 gi|309392193|gb|ADO69652.1| regulator of chromosome condensation-like protein [Stigmatella
           aurantiaca DW4/3-1]
          Length = 732

 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 108/362 (29%), Positives = 163/362 (45%), Gaps = 21/362 (5%)

Query: 116 ITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           +  G  H+L+  S+ +V++ G+++ G  G G   T   S   +   + +    V+A + H
Sbjct: 337 VAAGETHSLVARSDGTVWAWGNNIEGQRGDGSAKT---STAPVQVTALSGGFTVAAGKAH 393

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 234
           A  V   G V+  G N     G   T      P  V  L G     V AG + +  L + 
Sbjct: 394 ALAVRSDGTVWAWGQNLFGQLGD-GTRMQRTAPVQVTGLSG--GVAVAAGDDHSLGLCLD 450

Query: 235 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 294
           G V   G NT GQLG G T  RP P  +    E+  VV +AAG S+ LAV+ +G V+++G
Sbjct: 451 GTVWAWGQNTSGQLGDGTTAQRPAPVQV---TELSGVVAVAAGTSHSLAVSSDGTVWAWG 507

Query: 295 SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGA 354
           S ++  LG G     L P  +Q     G  VV V+AG  H +A+ S G V+ WG      
Sbjct: 508 SNASGQLGDGTTRARLTP--VQVAGLSG--VVAVAAGYFHSLAVRSDGTVWAWGNNSFFQ 563

Query: 355 LGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGV 414
           LG G    +  P  +  L   +A    A    + VL   G+V+G+G   +G LG    G 
Sbjct: 564 LGDGTNTQRPTPVRVPGLSGGVAA--AAGYFHSLVLRSDGTVWGWGNNAYGQLG---NGT 618

Query: 415 SDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPT 474
           ++    P  +  L       ++ G + ++ V   G +  +GDN   QLG  T+   L P 
Sbjct: 619 ANASFSPVQVTGLSGGVA--VAAGDFQSLAVRSDGTVRAWGDNIYGQLGDGTVTTRLAPV 676

Query: 475 EI 476
            +
Sbjct: 677 GV 678



 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 98/367 (26%), Positives = 155/367 (42%), Gaps = 21/367 (5%)

Query: 111 AGNMQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS 169
           +G +++  G  H+L +  + +V++ G +  G LG G    +      +     + VV V+
Sbjct: 182 SGGVKVAAGDGHSLAVCLDGTVWAWGRNDSGQLGDGTTVQRSAP---VQVAGLSGVVAVA 238

Query: 170 ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
           A  +H+  V   G V+  G NS    G   T+  +  P  V  L G     V AG+  + 
Sbjct: 239 AGSSHSLAVRSDGTVWAWGRNSDGQLGDGTTSARL-TPVQVTGLSG--GVAVAAGMFHSL 295

Query: 230 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 289
            +   G V   G NT GQLG G      TP     L E  +V   AAG ++ L    +G 
Sbjct: 296 AVRSDGTVWAWGQNTRGQLGDGSMTASLTPVQAIGLSEGEAV---AAGETHSLVARSDGT 352

Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 349
           V+++G+      G G       P  +            V+AG  H +A+ S G V+ WG+
Sbjct: 353 VWAWGNNIEGQRGDGSAKTSTAPVQVTALSGG----FTVAAGKAHALAVRSDGTVWAWGQ 408

Query: 350 GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGF 409
              G LG G  + +T P  ++ L   +A  V A    +  L   G+V+ +G    G LG 
Sbjct: 409 NLFGQLGDGTRMQRTAPVQVTGLSGGVA--VAAGDDHSLGLCLDGTVWAWGQNTSGQLGD 466

Query: 410 PDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG 469
                     RP  +       V  ++ G  H++ V+  G ++ +G N   QLG  T R 
Sbjct: 467 -----GTTAQRPAPVQVTELSGVVAVAAGTSHSLAVSSDGTVWAWGSNASGQLGDGTTRA 521

Query: 470 CLEPTEI 476
            L P ++
Sbjct: 522 RLTPVQV 528



 Score =  102 bits (255), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 101/366 (27%), Positives = 161/366 (43%), Gaps = 21/366 (5%)

Query: 112 GNMQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSA 170
           G  ++  G  H+L I  + +V++ GS+  G LG G  + + V    +    A   V V+A
Sbjct: 33  GKSRLAAGGSHSLAIRPDGTVWAAGSNTSGQLGDGTTSERRVPAQVVGLSDA---VLVAA 89

Query: 171 SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
             +H+  +   G  +  G N S   G   T R   RP  V  L     + V AG   +  
Sbjct: 90  GSSHSLAIRSDGTAWAWGHNGSGELGDGTTFRRT-RPVQVTGLS--EAEAVAAGDGHSLV 146

Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 290
           +   G V   G N+ GQLG G T +R  P  +A L      V++AAG  + LAV  +G V
Sbjct: 147 VRSDGTVWAWGWNSDGQLGDGTTRERHVPVQVAGLS---GGVKVAAGDGHSLAVCLDGTV 203

Query: 291 YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKG 350
           +++G   +  LG G       P  +Q     G  VV V+AG  H +A+ S G V+ WG+ 
Sbjct: 204 WAWGRNDSGQLGDGTTVQRSAP--VQVAGLSG--VVAVAAGSSHSLAVRSDGTVWAWGRN 259

Query: 351 YCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFP 410
             G LG G    +  P  ++ L   +A  V A    +  +   G+V+ +G    G LG  
Sbjct: 260 SDGQLGDGTTSARLTPVQVTGLSGGVA--VAAGMFHSLAVRSDGTVWAWGQNTRGQLG-- 315

Query: 411 DRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGC 470
             G     L P  + ++       ++ G  H++V    G ++ +G+N   Q G  + +  
Sbjct: 316 -DGSMTASLTP--VQAIGLSEGEAVAAGETHSLVARSDGTVWAWGNNIEGQRGDGSAKTS 372

Query: 471 LEPTEI 476
             P ++
Sbjct: 373 TAPVQV 378



 Score =  102 bits (254), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 100/369 (27%), Positives = 161/369 (43%), Gaps = 25/369 (6%)

Query: 111 AGNMQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS 169
           +G + +  G +H+L + S+ +V++ G +  G LG G  T    S T +     +    V+
Sbjct: 282 SGGVAVAAGMFHSLAVRSDGTVWAWGQNTRGQLGDGSMT---ASLTPVQAIGLSEGEAVA 338

Query: 170 ASENHAAFVLQSGQVFTCGDNSSFCCGHRD--TNRPIFRPRLVEALKGVPCKQVTAGLNF 227
           A E H+      G V+  G+N     G R   + +    P  V AL G     V AG   
Sbjct: 339 AGETHSLVARSDGTVWAWGNN---IEGQRGDGSAKTSTAPVQVTALSG--GFTVAAGKAH 393

Query: 228 TGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN 287
              +   G V   G N  GQLG G  + R  P  +  L      V +AAG  + L +  +
Sbjct: 394 ALAVRSDGTVWAWGQNLFGQLGDGTRMQRTAPVQVTGLS---GGVAVAAGDDHSLGLCLD 450

Query: 288 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 347
           G V+++G  ++  LG G      +P  +Q     G  VV V+AG  H +A+ S G V+ W
Sbjct: 451 GTVWAWGQNTSGQLGDGTTAQ--RPAPVQVTELSG--VVAVAAGTSHSLAVSSDGTVWAW 506

Query: 348 GKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSL 407
           G    G LG G    +  P  ++ L     V V A    +  +   G+V+ +G   F  L
Sbjct: 507 GSNASGQLGDGTTRARLTPVQVAGLSG--VVAVAAGYFHSLAVRSDGTVWAWGNNSFFQL 564

Query: 408 GFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTL 467
           G    G + +   P  +  L     +  + G +H++V+   G ++G+G+N   QLG+ T 
Sbjct: 565 G---DGTNTQRPTPVRVPGLSGGVAA--AAGYFHSLVLRSDGTVWGWGNNAYGQLGNGTA 619

Query: 468 RGCLEPTEI 476
                P ++
Sbjct: 620 NASFSPVQV 628



 Score = 82.0 bits (201), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 93/330 (28%), Positives = 136/330 (41%), Gaps = 60/330 (18%)

Query: 99  SVEHSSDIVETSA--GNMQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFT 155
           S + S+  V+ +A  G   +  G+ H L + S+ +V++ G +L G LG G   T+     
Sbjct: 368 SAKTSTAPVQVTALSGGFTVAAGKAHALAVRSDGTVWAWGQNLFGQLGDG---TRMQRTA 424

Query: 156 RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDT-NRPIFRPRLVEALK 214
            +     +  V V+A ++H+  +   G V+  G N+S   G   T  RP   P  V  L 
Sbjct: 425 PVQVTGLSGGVAVAAGDDHSLGLCLDGTVWAWGQNTSGQLGDGTTAQRPA--PVQVTELS 482

Query: 215 GVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQI 274
           GV    V AG + +  ++  G V   GSN  GQLG G T  R TP  +A L     VV +
Sbjct: 483 GVVA--VAAGTSHSLAVSSDGTVWAWGSNASGQLGDGTTRARLTPVQVAGLS---GVVAV 537

Query: 275 AAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQP---------------------- 312
           AAG  + LAV  +G V+++G+ S F LG G       P                      
Sbjct: 538 AAGYFHSLAVRSDGTVWAWGNNSFFQLGDGTNTQRPTPVRVPGLSGGVAAAAGYFHSLVL 597

Query: 313 RAIQTFRRKGIHV------------------------VRVSAGDEHVVALDSSGYVYTWG 348
           R+  T    G +                         V V+AGD   +A+ S G V  WG
Sbjct: 598 RSDGTVWGWGNNAYGQLGNGTANASFSPVQVTGLSGGVAVAAGDFQSLAVRSDGTVRAWG 657

Query: 349 KGYCGALGHGDEIDKTLPEPLSSLKSHLAV 378
               G LG G    +  P  ++ L   +AV
Sbjct: 658 DNIYGQLGDGTVTTRLAPVGVNGLSGGMAV 687



 Score = 76.3 bits (186), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 77/252 (30%), Positives = 113/252 (44%), Gaps = 20/252 (7%)

Query: 111 AGNMQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS 169
           +G + +  G  H+L +S + +V++ GS+  G LG G   T     T +     + VV V+
Sbjct: 482 SGVVAVAAGTSHSLAVSSDGTVWAWGSNASGQLGDG---TTRARLTPVQVAGLSGVVAVA 538

Query: 170 ASENHAAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVPCKQVTAGLNFT 228
           A   H+  V   G V+  G+NS F  G   +T RP   P  V  L G     V A   + 
Sbjct: 539 AGYFHSLAVRSDGTVWAWGNNSFFQLGDGTNTQRPT--PVRVPGLSG----GVAAAAGYF 592

Query: 229 GFLTIR--GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTG 286
             L +R  G V   G+N +GQLG+G      +P  +  L      V +AAG    LAV  
Sbjct: 593 HSLVLRSDGTVWGWGNNAYGQLGNGTANASFSPVQVTGLS---GGVAVAAGDFQSLAVRS 649

Query: 287 NGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYT 346
           +G V ++G      LG G     L P  +          + V+AG+   +A+ S G ++ 
Sbjct: 650 DGTVRAWGDNIYGQLGDGTVTTRLAPVGVNGLSGG----MAVAAGNGFSLAVHSGGMLHA 705

Query: 347 WGKGYCGALGHG 358
           WG    G LGHG
Sbjct: 706 WGYNTDGQLGHG 717


>gi|55832766|gb|AAV66896.1| truncated HERC6 [Homo sapiens]
          Length = 364

 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 89/274 (32%), Positives = 130/274 (47%), Gaps = 8/274 (2%)

Query: 193 FCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGD 252
           FC G    +R + R R   +  G    Q  +G   +  L     V +CG N+ GQLG   
Sbjct: 3   FCWG--ADSRELQRRRTAGS-PGAELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRG 59

Query: 253 TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGE-QHDELQ 311
                 P+ I  LE +  V  ++ G  + LAV   G V+++G+GS   LG GE +     
Sbjct: 60  AQRGELPEPIQALETL-IVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFT 118

Query: 312 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEI-DKTLPEPLS 370
           P+ I T     I +++VS G  H +AL     V++WGK   G LG G E   +  P+ + 
Sbjct: 119 PKKIMTLND--IKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEFPSQASPQRVR 176

Query: 371 SLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAH 430
           SL+     QV A    +F L   G+ +G+G    G L    R V  +  +P  + +L+  
Sbjct: 177 SLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSVGALKNL 236

Query: 431 HVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 464
            V  IS G  HT V+T  G++F FGDN   QLG+
Sbjct: 237 GVVYISCGDAHTAVLTQDGKVFTFGDNRSGQLGY 270



 Score =  102 bits (254), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 89/302 (29%), Positives = 148/302 (49%), Gaps = 20/302 (6%)

Query: 163 AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 222
           A ++Q ++ E H+  +L + +V +CGDNS    G R   R    P  ++AL+ +    V+
Sbjct: 23  AELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGEL-PEPIQALETLIVDLVS 81

Query: 223 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRP-TPKSIAPLEEVGSVVQIAAGPSYM 281
            G   +  +  +G V   G+ + GQLG G+  +   TPK I  L ++  ++Q++ G  + 
Sbjct: 82  CGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKIMTLNDI-KIIQVSCGHYHS 140

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQH-DELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 340
           LA++ +  V+S+G  S+  LG G++   +  P+ +++   +GI + +V+AG  H  AL  
Sbjct: 141 LALSKDSQVFSWGKNSHGQLGLGKEFPSQASPQRVRSL--EGIPLAQVAAGGAHSFALSL 198

Query: 341 SGYVYTWGKGYCGAL---GHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVY 397
            G  + WG    G L   G    +    P  + +LK+   V +      T VL   G V+
Sbjct: 199 CGTSFGWGSNSAGQLALSGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGKVF 258

Query: 398 GFGWMGFGSLGF---PDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV-VTDRGRLFG 453
            FG    G LG+   P++     V R   +D L    VSQI  G YHT+  V   G++  
Sbjct: 259 TFGDNRSGQLGYSPTPEKRGPQLVER---IDGL----VSQIDCGSYHTLAYVHTTGQVVS 311

Query: 454 FG 455
           FG
Sbjct: 312 FG 313



 Score = 88.6 bits (218), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 79/297 (26%), Positives = 130/297 (43%), Gaps = 19/297 (6%)

Query: 114 MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHV 165
           +Q  +G  H+LL+ +N  V SCG +  G LG         PE  Q +    ++       
Sbjct: 26  LQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGELPEPIQALETLIVDL------ 79

Query: 166 VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 225
             VS  + H+  V   G+VF  G  S    G  +     F P+ +  L  +   QV+ G 
Sbjct: 80  --VSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKIMTLNDIKIIQVSCGH 137

Query: 226 NFTGFLTIRGHVHTCGSNTHGQLGHGDTL-DRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 284
             +  L+    V + G N+HGQLG G     + +P+ +  LE +  + Q+AAG ++  A+
Sbjct: 138 YHSLALSKDSQVFSWGKNSHGQLGLGKEFPSQASPQRVRSLEGI-PLAQVAAGGAHSFAL 196

Query: 285 TGNGVVYSFGSGSNFCLGHGEQHDELQP-RAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 343
           +  G  + +GS S   L    ++  +Q  + +     K + VV +S GD H   L   G 
Sbjct: 197 SLCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGK 256

Query: 344 VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 400
           V+T+G    G LG+    +K  P+ +  +   ++   C        +  TG V  FG
Sbjct: 257 VFTFGDNRSGQLGYSPTPEKRGPQLVERIDGLVSQIDCGSYHTLAYVHTTGQVVSFG 313


>gi|281207411|gb|EFA81594.1| hypothetical protein PPL_05585 [Polysphondylium pallidum PN500]
          Length = 624

 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 80/220 (36%), Positives = 111/220 (50%), Gaps = 6/220 (2%)

Query: 237 VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 296
           V + G N  GQLG GD ++R  P  I+ L +   V  +AAG  +   ++  G ++SFG G
Sbjct: 160 VLSWGCNRWGQLGLGDQVNRCHPTPISGLSQSIPVF-VAAGSQHSFVLSKFGELFSFGCG 218

Query: 297 SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 356
           +   LGHG +     PR I T    G H+V V+AG  H  A+DS G +YTWG    G LG
Sbjct: 219 TFGRLGHGNELPSFNPRPISTLV--GKHIVSVAAGLMHSAAVDSQGALYTWGWNRYGQLG 276

Query: 357 HGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSD 416
            G     TLP     L+    V+V   K  T VL   G VY FG+   G LG      +D
Sbjct: 277 LGTVKKHTLPNKNKELERFNIVKVVCGKNHTLVLDVNGHVYSFGFNVCGQLGI--GSYTD 334

Query: 417 KVLRPRI-LDSLRAHHVSQISTGLYHTVVVTDRGRLFGFG 455
            +   RI LD  +   +  I+ G YH +++T +G ++ FG
Sbjct: 335 SIKPNRIDLDLKQNDEIIDIAAGYYHVLLLTKKGCVYSFG 374



 Score =  108 bits (271), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 105/375 (28%), Positives = 175/375 (46%), Gaps = 32/375 (8%)

Query: 116 ITTGRYHTL--LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
           I  G  H L  L ++++V S G +  G LG G +  +C   T I+  S +  V V+A   
Sbjct: 143 IACGDSHALAVLPNDATVLSWGCNRWGQLGLGDQVNRCHP-TPISGLSQSIPVFVAAGSQ 201

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
           H+  + + G++F+ G  +    GH +   P F PR +  L G     V AGL  +  +  
Sbjct: 202 HSFVLSKFGELFSFGCGTFGRLGHGNE-LPSFNPRPISTLVGKHIVSVAAGLMHSAAVDS 260

Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
           +G ++T G N +GQLG G       P     LE   ++V++  G ++ L +  NG VYSF
Sbjct: 261 QGALYTWGWNRYGQLGLGTVKKHTLPNKNKELERF-NIVKVVCGKNHTLVLDVNGHVYSF 319

Query: 294 GSGSNFC--LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 351
             G N C  LG G   D ++P  I    ++   ++ ++AG  HV+ L   G VY++G   
Sbjct: 320 --GFNVCGQLGIGSYTDSIKPNRIDLDLKQNDEIIDIAAGYYHVLLLTKKGCVYSFGYIS 377

Query: 352 CGALGHGDEID-KTLPE--PLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLG 408
            GALG GD +  ++ P+  P S         + + K           +YG     + S  
Sbjct: 378 DGALGLGDVVGHQSRPKLMPFSHFNHEFNDSIDSYKE----------IYG----EYNSDS 423

Query: 409 FPDRGVSDKVLRPRILD--SLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH-- 464
             D   ++  L P++++  +       +I+ G +H+ ++T  GRL+ FG  +  +LG+  
Sbjct: 424 ENDINNNNAKLPPKVVELHNEIGDVAVKIAAGGWHSAIITSSGRLYTFGLGDNFRLGNNC 483

Query: 465 --DTLRGCLEPTEIF 477
             D    C+   EI+
Sbjct: 484 QEDQDMPCIVNKEIW 498



 Score = 85.1 bits (209), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 51/162 (31%), Positives = 82/162 (50%), Gaps = 4/162 (2%)

Query: 315 IQTFRRKGIHVVRVSAGDEHVVA-LDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
           + T  ++G+ V  ++ GD H +A L +   V +WG    G LG GD++++  P P+S L 
Sbjct: 130 LPTLIKQGLIVSMIACGDSHALAVLPNDATVLSWGCNRWGQLGLGDQVNRCHPTPISGLS 189

Query: 374 SHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVS 433
             + V V A  + +FVL   G ++ FG   FG LG    G       PR + +L   H+ 
Sbjct: 190 QSIPVFVAAGSQHSFVLSKFGELFSFGCGTFGRLG---HGNELPSFNPRPISTLVGKHIV 246

Query: 434 QISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTE 475
            ++ GL H+  V  +G L+ +G N   QLG  T++    P +
Sbjct: 247 SVAAGLMHSAAVDSQGALYTWGWNRYGQLGLGTVKKHTLPNK 288



 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 65/215 (30%), Positives = 99/215 (46%), Gaps = 6/215 (2%)

Query: 271 VVQIAAGPSYMLAVTGN-GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS 329
           V  IA G S+ LAV  N   V S+G      LG G+Q +   P  I    +     V V+
Sbjct: 140 VSMIACGDSHALAVLPNDATVLSWGCNRWGQLGLGDQVNRCHPTPISGLSQS--IPVFVA 197

Query: 330 AGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFV 389
           AG +H   L   G ++++G G  G LGHG+E+    P P+S+L     V V A    +  
Sbjct: 198 AGSQHSFVLSKFGELFSFGCGTFGRLGHGNELPSFNPRPISTLVGKHIVSVAAGLMHSAA 257

Query: 390 LVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRG 449
           +   G++Y +GW  +G LG    G   K   P     L   ++ ++  G  HT+V+   G
Sbjct: 258 VDSQGALYTWGWNRYGQLGL---GTVKKHTLPNKNKELERFNIVKVVCGKNHTLVLDVNG 314

Query: 450 RLFGFGDNERAQLGHDTLRGCLEPTEIFIQEMEED 484
            ++ FG N   QLG  +    ++P  I +   + D
Sbjct: 315 HVYSFGFNVCGQLGIGSYTDSIKPNRIDLDLKQND 349



 Score = 59.7 bits (143), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 55/205 (26%), Positives = 94/205 (45%), Gaps = 18/205 (8%)

Query: 114 MQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINF--PSAAHVVQVSA 170
           +++  G+ HTL++  N  V+S G ++CG LG G   T  +   RI+        ++ ++A
Sbjct: 298 VKVVCGKNHTLVLDVNGHVYSFGFNVCGQLGIG-SYTDSIKPNRIDLDLKQNDEIIDIAA 356

Query: 171 SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN--FT 228
              H   + + G V++ G  S    G  D      RP+L+      P        N    
Sbjct: 357 GYYHVLLLTKKGCVYSFGYISDGALGLGDVVGHQSRPKLM------PFSHFNHEFNDSID 410

Query: 229 GFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSV-VQIAAGPSYMLAVTGN 287
            +  I G  +   S++   + + +   +  PK +    E+G V V+IAAG  +   +T +
Sbjct: 411 SYKEIYGEYN---SDSENDINNNNA--KLPPKVVELHNEIGDVAVKIAAGGWHSAIITSS 465

Query: 288 GVVYSFGSGSNFCLGHGEQHDELQP 312
           G +Y+FG G NF LG+  Q D+  P
Sbjct: 466 GRLYTFGLGDNFRLGNNCQEDQDMP 490


>gi|119626423|gb|EAX06018.1| hect domain and RLD 6, isoform CRA_a [Homo sapiens]
          Length = 385

 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 89/274 (32%), Positives = 130/274 (47%), Gaps = 8/274 (2%)

Query: 193 FCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGD 252
           FC G    +R + R R   +  G    Q  +G   +  L     V +CG N+ GQLG   
Sbjct: 3   FCWG--ADSRELQRRRTAGS-PGAELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRG 59

Query: 253 TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGE-QHDELQ 311
                 P+ I  LE +  V  ++ G  + LAV   G V+++G+GS   LG GE +     
Sbjct: 60  AQRGELPEPIQALETL-IVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFT 118

Query: 312 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEI-DKTLPEPLS 370
           P+ I T     I +++VS G  H +AL     V++WGK   G LG G E   +  P+ + 
Sbjct: 119 PKKIMTLND--IKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEFPSQASPQRVR 176

Query: 371 SLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAH 430
           SL+     QV A    +F L   G+ +G+G    G L    R V  +  +P  + +L+  
Sbjct: 177 SLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSVGALKNL 236

Query: 431 HVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 464
            V  IS G  HT V+T  G++F FGDN   QLG+
Sbjct: 237 GVVYISCGDAHTAVLTQDGKVFTFGDNRSGQLGY 270



 Score =  102 bits (254), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 89/302 (29%), Positives = 148/302 (49%), Gaps = 20/302 (6%)

Query: 163 AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 222
           A ++Q ++ E H+  +L + +V +CGDNS    G R   R    P  ++AL+ +    V+
Sbjct: 23  AELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGEL-PEPIQALETLIVDLVS 81

Query: 223 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRP-TPKSIAPLEEVGSVVQIAAGPSYM 281
            G   +  +  +G V   G+ + GQLG G+  +   TPK I  L ++  ++Q++ G  + 
Sbjct: 82  CGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKIMTLNDI-KIIQVSCGHYHS 140

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQH-DELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 340
           LA++ +  V+S+G  S+  LG G++   +  P+ +++   +GI + +V+AG  H  AL  
Sbjct: 141 LALSKDSQVFSWGKNSHGQLGLGKEFPSQASPQRVRSL--EGIPLAQVAAGGAHSFALSL 198

Query: 341 SGYVYTWGKGYCGAL---GHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVY 397
            G  + WG    G L   G    +    P  + +LK+   V +      T VL   G V+
Sbjct: 199 CGTSFGWGSNSAGQLALSGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGKVF 258

Query: 398 GFGWMGFGSLGF---PDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV-VTDRGRLFG 453
            FG    G LG+   P++     V R   +D L    VSQI  G YHT+  V   G++  
Sbjct: 259 TFGDNRSGQLGYSPTPEKRGPQLVER---IDGL----VSQIDCGSYHTLAYVHTTGQVVS 311

Query: 454 FG 455
           FG
Sbjct: 312 FG 313



 Score = 88.6 bits (218), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 79/297 (26%), Positives = 130/297 (43%), Gaps = 19/297 (6%)

Query: 114 MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHV 165
           +Q  +G  H+LL+ +N  V SCG +  G LG         PE  Q +    ++       
Sbjct: 26  LQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGELPEPIQALETLIVDL------ 79

Query: 166 VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 225
             VS  + H+  V   G+VF  G  S    G  +     F P+ +  L  +   QV+ G 
Sbjct: 80  --VSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKIMTLNDIKIIQVSCGH 137

Query: 226 NFTGFLTIRGHVHTCGSNTHGQLGHGDTL-DRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 284
             +  L+    V + G N+HGQLG G     + +P+ +  LE +  + Q+AAG ++  A+
Sbjct: 138 YHSLALSKDSQVFSWGKNSHGQLGLGKEFPSQASPQRVRSLEGI-PLAQVAAGGAHSFAL 196

Query: 285 TGNGVVYSFGSGSNFCLGHGEQHDELQP-RAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 343
           +  G  + +GS S   L    ++  +Q  + +     K + VV +S GD H   L   G 
Sbjct: 197 SLCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGK 256

Query: 344 VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 400
           V+T+G    G LG+    +K  P+ +  +   ++   C        +  TG V  FG
Sbjct: 257 VFTFGDNRSGQLGYSPTPEKRGPQLVERIDGLVSQIDCGSYHTLAYVHTTGQVVSFG 313


>gi|302753472|ref|XP_002960160.1| hypothetical protein SELMODRAFT_73640 [Selaginella moellendorffii]
 gi|300171099|gb|EFJ37699.1| hypothetical protein SELMODRAFT_73640 [Selaginella moellendorffii]
          Length = 435

 Score =  113 bits (282), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 97/351 (27%), Positives = 156/351 (44%), Gaps = 26/351 (7%)

Query: 112 GNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSAS 171
           GN+ +T G +H++L +   VF  G    G LG   E  Q   +     P    V   SA 
Sbjct: 87  GNVGVTCGLFHSVLFAEQDVFVWGKGDGGRLGIDTEFNQYKPYVN---PRIKRVQMASAG 143

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
             H   + + G V+T G  +    GH    R +  PRL+E         V+AG + T  +
Sbjct: 144 GLHNIALTEVGNVYTWGYGAFGALGHGSYERELL-PRLLEGPWKDRIVHVSAGGSHTAAV 202

Query: 232 TIRGHVHTCGSNT-HGQLGHGD-------TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
           T  G ++T G +   G+LGHG+        L RPT   +  L+    +  +  G  + +A
Sbjct: 203 TESGELYTWGRDEGEGRLGHGNPDIMDEGALSRPT--KVQALDV--PIALVYCGGFFTMA 258

Query: 284 VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 343
           +T +G ++S+G  +N  LGHG + +  +P+ +     + + +V+V+ G  H  AL   G 
Sbjct: 259 LTKSGQLWSWGGNANHELGHGTRANNWKPKVVAAL--EDVTLVQVACGGFHAAALTQDGK 316

Query: 344 VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 403
           V TWG G  G LGHG   +   P  + ++       +      T  + + G +Y +G   
Sbjct: 317 VITWGYGGNGQLGHGTLENGKEPAIVEAMADKTCTYIACGPAWTAAITENGDLYTWGKNR 376

Query: 404 FGSLGFPDRGVSDKVLRPRILDSLRAHH------VSQISTGLYHTVVVTDR 448
              LG P  G+ D+ L P ++   +A H      V  +S G  H V +  R
Sbjct: 377 DYQLGIP--GLKDEQLDPVLVQFPQALHEKTPVEVLGVSCGANHGVCIVSR 425



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 80/271 (29%), Positives = 124/271 (45%), Gaps = 18/271 (6%)

Query: 221 VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 280
           VT GL F   L     V   G    G+LG     ++  P  + P   +  V   +AG  +
Sbjct: 91  VTCGL-FHSVLFAEQDVFVWGKGDGGRLGIDTEFNQYKP-YVNP--RIKRVQMASAGGLH 146

Query: 281 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 340
            +A+T  G VY++G G+   LGHG    EL PR ++   +    +V VSAG  H  A+  
Sbjct: 147 NIALTEVGNVYTWGYGAFGALGHGSYERELLPRLLEGPWKD--RIVHVSAGGSHTAAVTE 204

Query: 341 SGYVYTWGKGYC-GALGHG-----DEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 394
           SG +YTWG+    G LGHG     DE   + P  + +L   +A+  C     T  L  +G
Sbjct: 205 SGELYTWGRDEGEGRLGHGNPDIMDEGALSRPTKVQALDVPIALVYCG-GFFTMALTKSG 263

Query: 395 SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 454
            ++ +G      LG    G      +P+++ +L    + Q++ G +H   +T  G++  +
Sbjct: 264 QLWSWGGNANHELG---HGTRANNWKPKVVAALEDVTLVQVACGGFHAAALTQDGKVITW 320

Query: 455 GDNERAQLGHDTLRGCLEPTEIFIQEMEEDT 485
           G     QLGH TL    EP    ++ M + T
Sbjct: 321 GYGGNGQLGHGTLENGKEPA--IVEAMADKT 349



 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 100/384 (26%), Positives = 154/384 (40%), Gaps = 42/384 (10%)

Query: 130 SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCG- 188
            V++ G    G +GHG E T+ +         AA            A         TCG 
Sbjct: 36  EVWAWGRGTHGQVGHGSEDTEKLPVLISTLKLAAFTGMAPIQGRMPAKPRLGNVGVTCGL 95

Query: 189 -------DNSSFCCGHRDTNR-----------PIFRPRLVEALKGVPCKQVTAGLNFTGF 230
                  +   F  G  D  R           P   PR+         +  +AG      
Sbjct: 96  FHSVLFAEQDVFVWGKGDGGRLGIDTEFNQYKPYVNPRIKR------VQMASAGGLHNIA 149

Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSI-APLEEVGSVVQIAAGPSYMLAVTGNGV 289
           LT  G+V+T G    G LGHG       P+ +  P ++   +V ++AG S+  AVT +G 
Sbjct: 150 LTEVGNVYTWGYGAFGALGHGSYERELLPRLLEGPWKD--RIVHVSAGGSHTAAVTESGE 207

Query: 290 VYSFGSGSNFC-LGHGEQH--DE---LQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 343
           +Y++G       LGHG     DE    +P  +Q      + +  V  G    +AL  SG 
Sbjct: 208 LYTWGRDEGEGRLGHGNPDIMDEGALSRPTKVQALD---VPIALVYCGGFFTMALTKSGQ 264

Query: 344 VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 403
           +++WG      LGHG   +   P+ +++L+    VQV         L   G V  +G+ G
Sbjct: 265 LWSWGGNANHELGHGTRANNWKPKVVAALEDVTLVQVACGGFHAAALTQDGKVITWGYGG 324

Query: 404 FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 463
            G LG    G  +    P I++++     + I+ G   T  +T+ G L+ +G N   QLG
Sbjct: 325 NGQLG---HGTLENGKEPAIVEAMADKTCTYIACGPAWTAAITENGDLYTWGKNRDYQLG 381

Query: 464 HDTLRG-CLEPTEI-FIQEMEEDT 485
              L+   L+P  + F Q + E T
Sbjct: 382 IPGLKDEQLDPVLVQFPQALHEKT 405



 Score = 40.0 bits (92), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 49/179 (27%), Positives = 75/179 (41%), Gaps = 31/179 (17%)

Query: 313 RAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSL 372
           R++Q  RR G    RVS+G+   +       V+ WG+G  G +GHG E  + LP  +S+L
Sbjct: 13  RSLQR-RRIGYLADRVSSGEPAELE------VWAWGRGTHGQVGHGSEDTEKLPVLISTL 65

Query: 373 K-------SHLAVQVCARKRKTFVLVDTG----------SVYGFGWMGFGSLGFPDRGVS 415
           K       + +  ++ A+ R   V V  G           V+ +G    G LG       
Sbjct: 66  KLAAFTGMAPIQGRMPAKPRLGNVGVTCGLFHSVLFAEQDVFVWGKGDGGRLGIDTEFNQ 125

Query: 416 DK-VLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEP 473
            K  + PRI        V   S G  H + +T+ G ++ +G      LGH +    L P
Sbjct: 126 YKPYVNPRI------KRVQMASAGGLHNIALTEVGNVYTWGYGAFGALGHGSYERELLP 178


>gi|405972531|gb|EKC37295.1| X-linked retinitis pigmentosa GTPase regulator [Crassostrea gigas]
          Length = 663

 Score =  113 bits (282), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 98/301 (32%), Positives = 144/301 (47%), Gaps = 18/301 (5%)

Query: 168 VSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF 227
           V+  + H A V +SG++FT G N     G  D  +   RP  V+ LK    K V  G   
Sbjct: 41  VACGDEHTALVTESGRLFTFGVNDWGQLGI-DEVKVSTRPCCVKKLKPEKVKVVACGRIH 99

Query: 228 TGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE---EVGSVVQIAAGPSYMLAV 284
           T   T  G ++T G+N  GQLG  D      P S  P++   E      +AAG  + +A+
Sbjct: 100 TIVATESGCLYTFGANGDGQLGVEDI-----PSSNCPVKVECEPRQYKALAAGADHSVAL 154

Query: 285 TGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           T +G +Y +G GS   LG G+  D+  P  + T  +    V+ V+ G  H   +   G V
Sbjct: 155 TDDGELYVWGGGSEGQLGLGDIDDKSTPTLLSTDNK----VISVACGYYHTAFVTDVGEV 210

Query: 345 YTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGF 404
           +T+G+G  G LG G +  K +     ++        C     T VL + G VY FG  G 
Sbjct: 211 FTFGEGDGGKLGQGTDYGKAVAPKKVNIPEKAKSVACGGSH-TVVLTECGKVYTFGEGGN 269

Query: 405 GSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 464
           G LG  ++    +   P  L+    H V+QI+ G  HT +VT++G+L+ FGD   A+LG 
Sbjct: 270 GQLGHKNKYFYCET--PVWLNF--KHKVTQIAAGENHTALVTEKGQLYTFGDGRHAKLGL 325

Query: 465 D 465
           D
Sbjct: 326 D 326



 Score = 64.7 bits (156), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 58/208 (27%), Positives = 92/208 (44%), Gaps = 9/208 (4%)

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           +A G  +   VT +G +++FG      LG  E     +P  ++  + + + VV  + G  
Sbjct: 41  VACGDEHTALVTESGRLFTFGVNDWGQLGIDEVKVSTRPCCVKKLKPEKVKVV--ACGRI 98

Query: 334 HVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDT 393
           H +    SG +YT+G    G LG  D      P  +          + A    +  L D 
Sbjct: 99  HTIVATESGCLYTFGANGDGQLGVEDIPSSNCPVKVECEPRQYKA-LAAGADHSVALTDD 157

Query: 394 GSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFG 453
           G +Y +G    G LG  D  + DK   P +L +   + V  ++ G YHT  VTD G +F 
Sbjct: 158 GELYVWGGGSEGQLGLGD--IDDKST-PTLLST--DNKVISVACGYYHTAFVTDVGEVFT 212

Query: 454 FGDNERAQLGHDTLRG-CLEPTEIFIQE 480
           FG+ +  +LG  T  G  + P ++ I E
Sbjct: 213 FGEGDGGKLGQGTDYGKAVAPKKVNIPE 240



 Score = 58.9 bits (141), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 52/173 (30%), Positives = 74/173 (42%), Gaps = 16/173 (9%)

Query: 295 SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGA 354
           SG+ F  G     D L  +    F  +G     V+ GDEH   +  SG ++T+G    G 
Sbjct: 12  SGAIFTFGKSRFGDNLPNK----FWVRGDKAKSVACGDEHTALVTESGRLFTFGVNDWGQ 67

Query: 355 LGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGV 414
           LG  +    T P  +  LK      V   +  T V  ++G +Y FG  G G LG  D   
Sbjct: 68  LGIDEVKVSTRPCCVKKLKPEKVKVVACGRIHTIVATESGCLYTFGANGDGQLGVEDIPS 127

Query: 415 SDKVLR----PRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 463
           S+  ++    PR   +L A        G  H+V +TD G L+ +G     QLG
Sbjct: 128 SNCPVKVECEPRQYKALAA--------GADHSVALTDDGELYVWGGGSEGQLG 172



 Score = 56.2 bits (134), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 39/145 (26%), Positives = 67/145 (46%), Gaps = 5/145 (3%)

Query: 106 IVETSAGNMQITTGRYHTLLISN-SSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAH 164
           ++ T    + +  G YHT  +++   VF+ G    G LG G +  + V+  ++N P  A 
Sbjct: 184 LLSTDNKVISVACGYYHTAFVTDVGEVFTFGEGDGGKLGQGTDYGKAVAPKKVNIPEKAK 243

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
            V    S  H   + + G+V+T G+  +   GH++       P  +     V   Q+ AG
Sbjct: 244 SVACGGS--HTVVLTECGKVYTFGEGGNGQLGHKNKYFYCETPVWLNFKHKV--TQIAAG 299

Query: 225 LNFTGFLTIRGHVHTCGSNTHGQLG 249
            N T  +T +G ++T G   H +LG
Sbjct: 300 ENHTALVTEKGQLYTFGDGRHAKLG 324



 Score = 52.8 bits (125), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 55/179 (30%), Positives = 79/179 (44%), Gaps = 14/179 (7%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V+ V+    H AFV   G+VFT G+      G          P+ V   +    K V  G
Sbjct: 191 VISVACGYYHTAFVTDVGEVFTFGEGDGGKLGQGTDYGKAVAPKKVNIPEKA--KSVACG 248

Query: 225 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTL---DRPTPKSIAPLEEVGSVVQIAAGPSYM 281
            + T  LT  G V+T G   +GQLGH +     + P       L     V QIAAG ++ 
Sbjct: 249 GSHTVVLTECGKVYTFGEGGNGQLGHKNKYFYCETPV-----WLNFKHKVTQIAAGENHT 303

Query: 282 LAVTGNGVVYSFGSGSNFCLG--HGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
             VT  G +Y+FG G +  LG  H    ++  P+  + F +    V +VS G  H++ L
Sbjct: 304 ALVTEKGQLYTFGDGRHAKLGLDHECYSNQYFPQRSKRFSK--FIVTQVSCGGCHMIVL 360



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 39/136 (28%), Positives = 63/136 (46%), Gaps = 15/136 (11%)

Query: 328 VSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKT 387
           ++AGD+  +    SG ++T+GK   G           LP     ++   A  V      T
Sbjct: 1   MAAGDDSEIP--ESGAIFTFGKSRFG---------DNLPNKFW-VRGDKAKSVACGDEHT 48

Query: 388 FVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTD 447
            ++ ++G ++ FG   +G LG  +  VS    RP  +  L+   V  ++ G  HT+V T+
Sbjct: 49  ALVTESGRLFTFGVNDWGQLGIDEVKVS---TRPCCVKKLKPEKVKVVACGRIHTIVATE 105

Query: 448 RGRLFGFGDNERAQLG 463
            G L+ FG N   QLG
Sbjct: 106 SGCLYTFGANGDGQLG 121


>gi|213983021|ref|NP_001135671.1| NIMA-related kinase 9 [Xenopus (Silurana) tropicalis]
 gi|197246344|gb|AAI68588.1| Unknown (protein for MGC:185428) [Xenopus (Silurana) tropicalis]
          Length = 924

 Score =  113 bits (282), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 84/275 (30%), Positives = 126/275 (45%), Gaps = 21/275 (7%)

Query: 207 PRLVEALKG-VPCKQVTAGLNFTGFLTIRGHVHTC-----GSNTHGQLGHGDTLDRPTPK 260
           P+ ++  KG    +QV AG      +T+   ++T      GS  HGQLGHGD      PK
Sbjct: 341 PQKLDVFKGGCRARQVCAGDAHFAVVTVEKELYTWVNMQGGSKLHGQLGHGDRASYRQPK 400

Query: 261 SIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH--DELQPRAIQTF 318
            +  L+   SV Q++ G  + + ++  G +YSFGS    CLG  +    + L+P  +  F
Sbjct: 401 HVEKLQG-KSVQQVSCGSDFTVCISDEGQLYSFGSDYYGCLGVNQSAGAEVLEPLLVDFF 459

Query: 319 RRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAV 378
             + +   +VS GD H++AL  S  VY+WG G  G LG   E D   P+ +   +    V
Sbjct: 460 LNEPVE--QVSCGDSHIIALTRSKCVYSWGCGEYGRLGLDSEDDVYSPQKVEVQRDLCIV 517

Query: 379 QVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRG---VSDKVLRP-------RILDSLR 428
            VC     +F+L  TG V   G      LG        ++ +  +         +   L 
Sbjct: 518 NVCCGSDGSFLLTLTGKVLACGLNEHNKLGLNQYTAGIINHEAFQEVPYTTSLTLAKQLS 577

Query: 429 AHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 463
            + +  IS G  HT  + +RGRL  FG N+  QLG
Sbjct: 578 FYKIRSISPGRTHTAAIDERGRLLTFGSNKCGQLG 612



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 48/173 (27%), Positives = 76/173 (43%), Gaps = 7/173 (4%)

Query: 312 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW-----GKGYCGALGHGDEIDKTLP 366
           P+ +  F+  G    +V AGD H   +     +YTW     G    G LGHGD      P
Sbjct: 341 PQKLDVFK-GGCRARQVCAGDAHFAVVTVEKELYTWVNMQGGSKLHGQLGHGDRASYRQP 399

Query: 367 EPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDS 426
           + +  L+     QV      T  + D G +Y FG   +G LG  ++    +VL P ++D 
Sbjct: 400 KHVEKLQGKSVQQVSCGSDFTVCISDEGQLYSFGSDYYGCLGV-NQSAGAEVLEPLLVDF 458

Query: 427 LRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQ 479
                V Q+S G  H + +T    ++ +G  E  +LG D+      P ++ +Q
Sbjct: 459 FLNEPVEQVSCGDSHIIALTRSKCVYSWGCGEYGRLGLDSEDDVYSPQKVEVQ 511



 Score = 69.3 bits (168), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 75/304 (24%), Positives = 128/304 (42%), Gaps = 34/304 (11%)

Query: 115 QITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPET-TQCVSFTRINFPSAAHVVQVSASE 172
           Q++ G   T+ IS+   ++S GS   G LG       + +    ++F     V QVS  +
Sbjct: 412 QVSCGSDFTVCISDEGQLYSFGSDYYGCLGVNQSAGAEVLEPLLVDFFLNEPVEQVSCGD 471

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHR-----DTNRPIFRPRLVEALKGVPCKQVTAGLNF 227
           +H   + +S  V++ G      CG       D+   ++ P+ VE  + +    V  G + 
Sbjct: 472 SHIIALTRSKCVYSWG------CGEYGRLGLDSEDDVYSPQKVEVQRDLCIVNVCCGSDG 525

Query: 228 TGFLTIRGHVHTCGSNTHGQLG----------HGDTLDRPTPKSIAPLEEVG--SVVQIA 275
           +  LT+ G V  CG N H +LG          H    + P   S+   +++    +  I+
Sbjct: 526 SFLLTLTGKVLACGLNEHNKLGLNQYTAGIINHEAFQEVPYTTSLTLAKQLSFYKIRSIS 585

Query: 276 AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHV 335
            G ++  A+   G + +FGS     LG G+    L    +      G  V+RVS GDE  
Sbjct: 586 PGRTHTAAIDERGRLLTFGSNKCGQLGVGDYRKHLGINLLGG-PLGGKQVIRVSCGDEFT 644

Query: 336 VALDSSGYVYTWGKGYCGALG-------HGDEIDKTLPEPLSSLKSHLAVQVCARKRKTF 388
           +A  +  +++ WG G  G L         G +I  + P P+     H+    C R   T 
Sbjct: 645 IAATADNHIFAWGNGGNGRLAMTPNERPQGSDICTSWPRPIFGSLHHVTDLSC-RGWHTI 703

Query: 389 VLVD 392
           ++V+
Sbjct: 704 LIVE 707



 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 82/333 (24%), Positives = 136/333 (40%), Gaps = 24/333 (7%)

Query: 135 GSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFC 194
           GS L G LGHG   +       +       V QVS   +    +   GQ+++ G +   C
Sbjct: 381 GSKLHGQLGHGDRASY-RQPKHVEKLQGKSVQQVSCGSDFTVCISDEGQLYSFGSDYYGC 439

Query: 195 CG-HRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDT 253
            G ++     +  P LV+     P +QV+ G +    LT    V++ G   +G+LG    
Sbjct: 440 LGVNQSAGAEVLEPLLVDFFLNEPVEQVSCGDSHIIALTRSKCVYSWGCGEYGRLGLDSE 499

Query: 254 LDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGE------QH 307
            D  +P+ +    ++  +V +  G      +T  G V + G   +  LG  +       H
Sbjct: 500 DDVYSPQKVEVQRDL-CIVNVCCGSDGSFLLTLTGKVLACGLNEHNKLGLNQYTAGIINH 558

Query: 308 DELQPRAIQT----FRRKGIHVVR-VSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEID 362
           +  Q     T     ++   + +R +S G  H  A+D  G + T+G   CG LG GD   
Sbjct: 559 EAFQEVPYTTSLTLAKQLSFYKIRSISPGRTHTAAIDERGRLLTFGSNKCGQLGVGD-YR 617

Query: 363 KTLPEPL--SSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGF-PD---RGVSD 416
           K L   L    L     ++V      T        ++ +G  G G L   P+   +G   
Sbjct: 618 KHLGINLLGGPLGGKQVIRVSCGDEFTIAATADNHIFAWGNGGNGRLAMTPNERPQGSDI 677

Query: 417 KVLRPR-ILDSLRAHHVSQISTGLYHTVVVTDR 448
               PR I  SL  HHV+ +S   +HT+++ ++
Sbjct: 678 CTSWPRPIFGSL--HHVTDLSCRGWHTILIVEK 708


>gi|41053397|ref|NP_956285.1| RCC1 and BTB domain-containing protein 1 [Danio rerio]
 gi|28278439|gb|AAH45877.1| Regulator of chromosome condensation (RCC1) and BTB (POZ) domain
           containing protein 1 [Danio rerio]
 gi|182890896|gb|AAI65711.1| Rcbtb1 protein [Danio rerio]
          Length = 531

 Score =  113 bits (282), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 77/260 (29%), Positives = 126/260 (48%), Gaps = 7/260 (2%)

Query: 223 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSV-VQIAAGPSYM 281
           A  N   ++T    V+  G N    LG GD+     PK +  L     + +   +GP ++
Sbjct: 29  ASANEAIYITHDDEVYVLGLNCSNCLGTGDSQSTIAPKKLDCLSGKKLISLSYGSGP-HV 87

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 341
           L VT +G +Y++G      LG+G  +  + P  + T   +G  V  VS G  H +AL   
Sbjct: 88  LLVTEDGELYAWGHNGYSQLGNGTTNQGVSPILVST-NLQGKRVTEVSCGSHHSLALTHE 146

Query: 342 GYVYTWGKGYCGALGHGDEIDKTLPEPLSS-LKSHLAVQVCARKRKTFVLVDTGSVYGFG 400
           G V+ WG   CG +G G   ++  P  +S+ L++ + V +   +  +  + D G VYG+G
Sbjct: 147 GEVFAWGYNNCGQVGSGSTANQPTPRKVSNCLQNKVIVNIACGQTSSMAVTDNGEVYGWG 206

Query: 401 WMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERA 460
           + G G LG  + G     L P  L +L+   V QI++G  H++ +TD G L+ +G N   
Sbjct: 207 YNGNGQLGLGNNG---NQLTPCRLIALQGFCVLQIASGYAHSLALTDEGLLYAWGANTYG 263

Query: 461 QLGHDTLRGCLEPTEIFIQE 480
           QLG       L P ++  ++
Sbjct: 264 QLGTGNKSNQLSPVQVMTEK 283



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 76/276 (27%), Positives = 134/276 (48%), Gaps = 7/276 (2%)

Query: 128 NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS-ASENHAAFVLQSGQVFT 186
           +  V+  G +    LG G ++   ++  +++  S   ++ +S  S  H   V + G+++ 
Sbjct: 40  DDEVYVLGLNCSNCLGTG-DSQSTIAPKKLDCLSGKKLISLSYGSGPHVLLVTEDGELYA 98

Query: 187 CGDNSSFCCGHRDTNRPIFRPRLVEA-LKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTH 245
            G N     G+  TN+ +  P LV   L+G    +V+ G + +  LT  G V   G N  
Sbjct: 99  WGHNGYSQLGNGTTNQGV-SPILVSTNLQGKRVTEVSCGSHHSLALTHEGEVFAWGYNNC 157

Query: 246 GQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGE 305
           GQ+G G T ++PTP+ ++   +   +V IA G +  +AVT NG VY +G   N  LG G 
Sbjct: 158 GQVGSGSTANQPTPRKVSNCLQNKVIVNIACGQTSSMAVTDNGEVYGWGYNGNGQLGLGN 217

Query: 306 QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTL 365
             ++L P   +    +G  V+++++G  H +AL   G +Y WG    G LG G++ ++  
Sbjct: 218 NGNQLTP--CRLIALQGFCVLQIASGYAHSLALTDEGLLYAWGANTYGQLGTGNKSNQLS 275

Query: 366 PEPLSSLKSHLA-VQVCARKRKTFVLVDTGSVYGFG 400
           P  + + K  +  +  C     +     +G VY +G
Sbjct: 276 PVQVMTEKERIVEIAACHSTHTSAAKTQSGQVYMWG 311



 Score = 59.3 bits (142), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 50/183 (27%), Positives = 91/183 (49%), Gaps = 6/183 (3%)

Query: 115 QITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
           +++ G +H+L +++   VF+ G + CG +G G    Q       N      +V ++  + 
Sbjct: 132 EVSCGSHHSLALTHEGEVFAWGYNNCGQVGSGSTANQPTPRKVSNCLQNKVIVNIACGQT 191

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
            +  V  +G+V+  G N +   G  +    +   RL+ AL+G    Q+ +G   +  LT 
Sbjct: 192 SSMAVTDNGEVYGWGYNGNGQLGLGNNGNQLTPCRLI-ALQGFCVLQIASGYAHSLALTD 250

Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPS--YMLAVTGNGVVY 291
            G ++  G+NT+GQLG G+  ++ +P  +  + E   +V+IAA  S     A T +G VY
Sbjct: 251 EGLLYAWGANTYGQLGTGNKSNQLSPVQV--MTEKERIVEIAACHSTHTSAAKTQSGQVY 308

Query: 292 SFG 294
            +G
Sbjct: 309 MWG 311


>gi|413951018|gb|AFW83667.1| putative regulator of chromosome condensation (RCC1) family protein
           [Zea mays]
          Length = 1054

 Score =  113 bits (282), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 94/323 (29%), Positives = 140/323 (43%), Gaps = 20/323 (6%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V Q+     H A   + G+VFT G+      GH  T+  I RP+LVE+L       ++ G
Sbjct: 258 VNQIVCGSRHVALTTRQGEVFTWGEELGGRLGH-GTDTDISRPKLVESLSVTIVDFISCG 316

Query: 225 LNFTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSYM 281
              T  ++  G +   G  ++  G LG+        PK ++ PLE +  V+ +A G  + 
Sbjct: 317 EFHTCAISASGDLFNWGDGSYRAGLLGYDTGASHWLPKRVSGPLEGL-QVLSVACGSWHS 375

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS- 340
             +T  G +Y+FG G    LGHG +     P+ ++     G   V+V+ G  H  A+   
Sbjct: 376 ALITSTGRLYTFGDGKFGALGHGNRESAAYPKEVEAL--NGFRTVKVACGVWHSAAIVEA 433

Query: 341 ---------SGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 391
                    S  +YTWG G    LG GD+  + +P  L +L  H   Q+   +  T  L 
Sbjct: 434 SVQTGMNVVSKKLYTWGDGDKNRLGQGDKEARLIPTCLQALLEHNFHQLGCGQNMTVALA 493

Query: 392 DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRL 451
            +G VY  G    G LG P        L   + D L    V +IS G  H  V+T R  +
Sbjct: 494 TSGHVYTMGSSDNGQLGNPKSDGKHPCL---VKDKLANELVEEISCGAAHVAVLTSRSEV 550

Query: 452 FGFGDNERAQLGHDTLRGCLEPT 474
           + +G     +LGH  L     PT
Sbjct: 551 YTWGLGANGRLGHGDLNDKKTPT 573



 Score = 98.6 bits (244), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 102/352 (28%), Positives = 149/352 (42%), Gaps = 36/352 (10%)

Query: 115 QITTGRYHTLLISNS-SVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHVV 166
           QI  G  H  L +    VF+ G  L G LGHG       P+  + +S T ++F       
Sbjct: 260 QIVCGSRHVALTTRQGEVFTWGEELGGRLGHGTDTDISRPKLVESLSVTIVDF------- 312

Query: 167 QVSASENHAAFVLQSGQVFTCGDNS--SFCCGHRDTNRPIFRPRLVEA-LKGVPCKQVTA 223
            +S  E H   +  SG +F  GD S  +   G+ DT    + P+ V   L+G+    V  
Sbjct: 313 -ISCGEFHTCAISASGDLFNWGDGSYRAGLLGY-DTGASHWLPKRVSGPLEGLQVLSVAC 370

Query: 224 GLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
           G   +  +T  G ++T G    G LGHG+      PK +  L      V++A G  +  A
Sbjct: 371 GSWHSALITSTGRLYTFGDGKFGALGHGNRESAAYPKEVEALNGF-RTVKVACGVWHSAA 429

Query: 284 V------TGNGVV----YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           +      TG  VV    Y++G G    LG G++   L P  +Q       H  ++  G  
Sbjct: 430 IVEASVQTGMNVVSKKLYTWGDGDKNRLGQGDKEARLIPTCLQALLEHNFH--QLGCGQN 487

Query: 334 HVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDT 393
             VAL +SG+VYT G    G LG+     K        L + L  ++        VL   
Sbjct: 488 MTVALATSGHVYTMGSSDNGQLGNPKSDGKHPCLVKDKLANELVEEISCGAAHVAVLTSR 547

Query: 394 GSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVV 445
             VY +G    G LG  D  ++DK   P I+++L+  HV  IS G   T  +
Sbjct: 548 SEVYTWGLGANGRLGHGD--LNDKKT-PTIVEALKDRHVKSISCGSNFTTCI 596



 Score = 86.3 bits (212), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 76/293 (25%), Positives = 130/293 (44%), Gaps = 16/293 (5%)

Query: 204 IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 263
           +  P+ +E+   +   Q+  G       T +G V T G    G+LGHG   D   PK + 
Sbjct: 244 VLIPKPLESDVVLDVNQIVCGSRHVALTTRQGEVFTWGEELGGRLGHGTDTDISRPKLVE 303

Query: 264 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC--LGHGEQHDELQPRAIQTFRRK 321
            L  V  V  I+ G  +  A++ +G ++++G GS     LG+        P+ + +   +
Sbjct: 304 SL-SVTIVDFISCGEFHTCAISASGDLFNWGDGSYRAGLLGYDTGASHWLPKRV-SGPLE 361

Query: 322 GIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVC 381
           G+ V+ V+ G  H   + S+G +YT+G G  GALGHG+      P+ + +L     V+V 
Sbjct: 362 GLQVLSVACGSWHSALITSTGRLYTFGDGKFGALGHGNRESAAYPKEVEALNGFRTVKVA 421

Query: 382 ARKRKTFVLVDTGSVYG--------FGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVS 433
                +  +V+     G        + W G G      +G  +  L P  L +L  H+  
Sbjct: 422 CGVWHSAAIVEASVQTGMNVVSKKLYTW-GDGDKNRLGQGDKEARLIPTCLQALLEHNFH 480

Query: 434 QISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG---CLEPTEIFIQEMEE 483
           Q+  G   TV +   G ++  G ++  QLG+    G   CL   ++  + +EE
Sbjct: 481 QLGCGQNMTVALATSGHVYTMGSSDNGQLGNPKSDGKHPCLVKDKLANELVEE 533


>gi|315506657|ref|YP_004085544.1| hyalin [Micromonospora sp. L5]
 gi|315413276|gb|ADU11393.1| Hyalin [Micromonospora sp. L5]
          Length = 1017

 Score =  113 bits (282), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 109/372 (29%), Positives = 172/372 (46%), Gaps = 34/372 (9%)

Query: 116  ITTGRYHTLLISNSSVFSC-GSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
            +  G+ H+L +++    S  G +L G LG+G   ++    T +     + ++ VS+ +  
Sbjct: 661  VAAGKGHSLAVNDDDTVSAWGDNLLGQLGNGSIFSET---TAVPVSGLSGILAVSSGDAS 717

Query: 175  AAFVLQSGQVFTCGDN--SSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            +  + +SG V + G+N       G R  +R   RP  V+ L G   KQ+ AG +    L 
Sbjct: 718  SYALTRSGVVHSWGENLLGQLGNGSRLQSR---RPVQVDGLTG--AKQIAAGNDHVLALK 772

Query: 233  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPS-----YMLAVTGN 287
              G V   GSN  GQLG    L    P ++  L    SVVQ+AAG +     + +A+ G+
Sbjct: 773  SDGTVAAWGSNLAGQLGRTGVLSATKPAAVPGLT---SVVQVAAGGTPGLAGHSVALKGD 829

Query: 288  GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 347
            G V+++G G N  LG G+      P  +        +VV ++A   +  AL S G V+ W
Sbjct: 830  GTVWTWGHGLNGQLGLGDHRSTATPTQVPGLS----NVVLIAADGNNTYALKSDGTVWAW 885

Query: 348  GKGYCGALGHGDEI-DKTLPEPLSSLKSHLA--VQVCARKRKTFVLVDTGSVYGFGWMGF 404
            G G  G +G+ D    +T P     LK +++  V + A       +   G+V+G+G    
Sbjct: 886  GDGNHGQIGNPDATHSQTTP-----LKVNISGVVSIDAGSTTAMAVKGDGTVWGWGSNAS 940

Query: 405  GSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 464
            G LG  DR        P     L       I++GL H++VV   G + G+G N   QLG+
Sbjct: 941  GQLG-DDRDCGLHCSTPVKASGLTG--AGWIASGLLHSLVVNTDGNVHGYGGNLLGQLGN 997

Query: 465  DTLRGCLEPTEI 476
             T +G   PT +
Sbjct: 998  GTRKGATTPTTV 1009



 Score = 66.2 bits (160), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 80/279 (28%), Positives = 119/279 (42%), Gaps = 27/279 (9%)

Query: 107  VETSAGNMQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAH 164
            V+   G  QI  G  H L L S+ +V + GS+L G LG     T  +S T+    P    
Sbjct: 752  VDGLTGAKQIAAGNDHVLALKSDGTVAAWGSNLAGQLGR----TGVLSATKPAAVPGLTS 807

Query: 165  VVQVSAS-----ENHAAFVLQSGQVFTCGD--NSSFCCG-HRDTNRPIFRPRLVEALKGV 216
            VVQV+A        H+  +   G V+T G   N     G HR T  P   P L   +   
Sbjct: 808  VVQVAAGGTPGLAGHSVALKGDGTVWTWGHGLNGQLGLGDHRSTATPTQVPGLSNVV--- 864

Query: 217  PCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE-EVGSVVQIA 275
                + A  N T  L   G V   G   HGQ+G+ D     T     PL+  +  VV I 
Sbjct: 865  ---LIAADGNNTYALKSDGTVWAWGDGNHGQIGNPDA----THSQTTPLKVNISGVVSID 917

Query: 276  AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHV 335
            AG +  +AV G+G V+ +GS ++  LG            ++     G     +++G  H 
Sbjct: 918  AGSTTAMAVKGDGTVWGWGSNASGQLGDDRDCGLHCSTPVKASGLTGAG--WIASGLLHS 975

Query: 336  VALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKS 374
            + +++ G V+ +G    G LG+G     T P  +S + +
Sbjct: 976  LVVNTDGNVHGYGGNLLGQLGNGTRKGATTPTTVSGVTA 1014



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 43/154 (27%), Positives = 67/154 (43%), Gaps = 7/154 (4%)

Query: 323 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCA 382
           I+   V+AG  H +A++    V  WG    G LG+G    +T   P+S L   LAV   +
Sbjct: 656 IYAPPVAAGKGHSLAVNDDDTVSAWGDNLLGQLGNGSIFSETTAVPVSGLSGILAVS--S 713

Query: 383 RKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHT 442
               ++ L  +G V+ +G    G LG    G   +  RP  +D L      QI+ G  H 
Sbjct: 714 GDASSYALTRSGVVHSWGENLLGQLG---NGSRLQSRRPVQVDGLTG--AKQIAAGNDHV 768

Query: 443 VVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 476
           + +   G +  +G N   QLG   +    +P  +
Sbjct: 769 LALKSDGTVAAWGSNLAGQLGRTGVLSATKPAAV 802



 Score = 38.5 bits (88), Expect = 8.0,   Method: Compositional matrix adjust.
 Identities = 39/145 (26%), Positives = 62/145 (42%), Gaps = 6/145 (4%)

Query: 125  LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQV 184
            L S+ +V++ G    G +G+   T    +  ++N    + VV + A    A  V   G V
Sbjct: 876  LKSDGTVWAWGDGNHGQIGNPDATHSQTTPLKVNI---SGVVSIDAGSTTAMAVKGDGTV 932

Query: 185  FTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 243
            +  G N+S   G  RD       P     L G     + +GL  +  +   G+VH  G N
Sbjct: 933  WGWGSNASGQLGDDRDCGLHCSTPVKASGLTG--AGWIASGLLHSLVVNTDGNVHGYGGN 990

Query: 244  THGQLGHGDTLDRPTPKSIAPLEEV 268
              GQLG+G      TP +++ +  V
Sbjct: 991  LLGQLGNGTRKGATTPTTVSGVTAV 1015


>gi|222632434|gb|EEE64566.1| hypothetical protein OsJ_19418 [Oryza sativa Japonica Group]
          Length = 1002

 Score =  113 bits (282), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 90/321 (28%), Positives = 145/321 (45%), Gaps = 20/321 (6%)

Query: 167 QVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN 226
           Q++    H     + G+VFT G+      GH  T+  I RP+LVE+L     + +  G  
Sbjct: 229 QIACGSRHIGLTTRQGEVFTWGEELGGRLGH-GTDTDICRPKLVESLAVSNVEYIACGEF 287

Query: 227 FTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSYMLA 283
            T  +T  G ++  G  ++  G LGHG  +    PK ++ PLE +  V+ +A G  +   
Sbjct: 288 HTCVVTASGDLYDWGDGSYNAGLLGHGTGVSHWLPKRVSGPLEGL-QVLSVACGSWHSAL 346

Query: 284 VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL----- 338
              +G +++FG G+   LGHG++     P+ ++     G   ++V+ G  H  A+     
Sbjct: 347 TMSSGKLFTFGDGTFGSLGHGDRESVAYPKEVEAL--SGFRAMKVACGVWHSAAIVEISG 404

Query: 339 -----DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDT 393
                  S  ++TWG G    LGHGD+  K +P  + +L  H   QV      T  L  +
Sbjct: 405 QASTNAMSRKLFTWGDGDKNRLGHGDKEAKLVPTCVQALVDHNFHQVACGHSMTVALATS 464

Query: 394 GSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFG 453
           G V+  G    G LG P    +D      + D L    V +IS G  H   +T R  ++ 
Sbjct: 465 GHVFTMGSSNNGQLGNPK---ADGKQPCMVQDKLGNELVEEISCGSNHVAALTSRSEVYT 521

Query: 454 FGDNERAQLGHDTLRGCLEPT 474
           +G     +LGH ++    +PT
Sbjct: 522 WGMGANGRLGHGSVEDKKKPT 542



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 87/273 (31%), Positives = 131/273 (47%), Gaps = 21/273 (7%)

Query: 116 ITTGRYHTLLISNSSV---FSCGSSLCGVLGHGPETTQCVSFTRINFP-SAAHVVQVSAS 171
           I  G +HT +++ S     +  GS   G+LGHG   +  +   R++ P     V+ V+  
Sbjct: 282 IACGEFHTCVVTASGDLYDWGDGSYNAGLLGHGTGVSHWLP-KRVSGPLEGLQVLSVACG 340

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL-NFTGF 230
             H+A  + SG++FT GD +    GH D    +  P+ VEAL G    +V  G+ +    
Sbjct: 341 SWHSALTMSSGKLFTFGDGTFGSLGHGD-RESVAYPKEVEALSGFRAMKVACGVWHSAAI 399

Query: 231 LTIRGH---------VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 281
           + I G          + T G     +LGHGD   +  P  +  L +  +  Q+A G S  
Sbjct: 400 VEISGQASTNAMSRKLFTWGDGDKNRLGHGDKEAKLVPTCVQALVD-HNFHQVACGHSMT 458

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVR-VSAGDEHVVALDS 340
           +A+  +G V++ GS +N  LG+  + D  QP  +Q   + G  +V  +S G  HV AL S
Sbjct: 459 VALATSGHVFTMGSSNNGQLGN-PKADGKQPCMVQD--KLGNELVEEISCGSNHVAALTS 515

Query: 341 SGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
              VYTWG G  G LGHG   DK  P  + +LK
Sbjct: 516 RSEVYTWGMGANGRLGHGSVEDKKKPTLVDALK 548



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 93/344 (27%), Positives = 142/344 (41%), Gaps = 20/344 (5%)

Query: 115 QITTGRYHT-LLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
           QI  G  H  L      VF+ G  L G LGHG +T  C     +   + ++V  ++  E 
Sbjct: 229 QIACGSRHIGLTTRQGEVFTWGEELGGRLGHGTDTDICRP-KLVESLAVSNVEYIACGEF 287

Query: 174 HAAFVLQSGQVFTCGDNS--SFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
           H   V  SG ++  GD S  +   GH          R+   L+G+    V  G   +   
Sbjct: 288 HTCVVTASGDLYDWGDGSYNAGLLGHGTGVSHWLPKRVSGPLEGLQVLSVACGSWHSALT 347

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAG---PSYMLAVTGNG 288
              G + T G  T G LGHGD      PK +  L      +++A G    + ++ ++G  
Sbjct: 348 MSSGKLFTFGDGTFGSLGHGDRESVAYPKEVEALSGF-RAMKVACGVWHSAAIVEISGQA 406

Query: 289 V-------VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 341
                   ++++G G    LGHG++  +L P  +Q       H  +V+ G    VAL +S
Sbjct: 407 STNAMSRKLFTWGDGDKNRLGHGDKEAKLVPTCVQALVDHNFH--QVACGHSMTVALATS 464

Query: 342 GYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGW 401
           G+V+T G    G LG+     K        L + L  ++         L     VY +G 
Sbjct: 465 GHVFTMGSSNNGQLGNPKADGKQPCMVQDKLGNELVEEISCGSNHVAALTSRSEVYTWGM 524

Query: 402 MGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVV 445
              G LG     V DK  +P ++D+L+  HV  IS G   T  +
Sbjct: 525 GANGRLGHG--SVEDKK-KPTLVDALKDRHVKSISCGSNFTTCI 565



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 80/278 (28%), Positives = 125/278 (44%), Gaps = 16/278 (5%)

Query: 219 KQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGP 278
           +Q+  G    G  T +G V T G    G+LGHG   D   PK +  L  V +V  IA G 
Sbjct: 228 EQIACGSRHIGLTTRQGEVFTWGEELGGRLGHGTDTDICRPKLVESL-AVSNVEYIACGE 286

Query: 279 SYMLAVTGNGVVYSFGSGSNFC--LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVV 336
            +   VT +G +Y +G GS     LGHG       P+ + +   +G+ V+ V+ G  H  
Sbjct: 287 FHTCVVTASGDLYDWGDGSYNAGLLGHGTGVSHWLPKRV-SGPLEGLQVLSVACGSWHSA 345

Query: 337 ALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG-- 394
              SSG ++T+G G  G+LGHGD      P+ + +L    A++V      +  +V+    
Sbjct: 346 LTMSSGKLFTFGDGTFGSLGHGDRESVAYPKEVEALSGFRAMKVACGVWHSAAIVEISGQ 405

Query: 395 ------SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDR 448
                 S   F W G G       G  +  L P  + +L  H+  Q++ G   TV +   
Sbjct: 406 ASTNAMSRKLFTW-GDGDKNRLGHGDKEAKLVPTCVQALVDHNFHQVACGHSMTVALATS 464

Query: 449 GRLFGFGDNERAQLGH---DTLRGCLEPTEIFIQEMEE 483
           G +F  G +   QLG+   D  + C+   ++  + +EE
Sbjct: 465 GHVFTMGSSNNGQLGNPKADGKQPCMVQDKLGNELVEE 502


>gi|47221092|emb|CAG12786.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 527

 Score =  113 bits (282), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 82/275 (29%), Positives = 130/275 (47%), Gaps = 5/275 (1%)

Query: 128 NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS-ASENHAAFVLQSGQVFT 186
           N  VF+ G++  G LG G +    +   RI+      +V +S  +  H A     G+VF+
Sbjct: 40  NDEVFALGTNCSGCLGLG-DLQSTIEPRRIDALCGKKIVSLSYGTGPHVAIATADGEVFS 98

Query: 187 CGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHG 246
            G N     G+  TN  +    +   L G    +V  G + T  LT  G V   G N  G
Sbjct: 99  WGHNGYSQLGNGTTNHGLTPALVSTNLLGKRVIEVACGSHHTIALTTDGEVFAWGYNNSG 158

Query: 247 QLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ 306
           Q+G G T ++PTP+ ++   +  +VV IA G    +AV  +G +Y +G   N  LG G  
Sbjct: 159 QVGSGSTANQPTPRRVSSCLQNKAVVNIACGQLCSMAVLDSGEIYGWGYNCNGQLGLGNN 218

Query: 307 HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP 366
            ++  P  I     +G+ V++V+ G  H +AL   G+VY WG    G LG G++ ++ LP
Sbjct: 219 GNQQTPCRIAAL--QGVSVIQVACGYAHTLALTDEGFVYAWGANSYGQLGTGNKCNQALP 276

Query: 367 EPLSSLKSHLA-VQVCARKRKTFVLVDTGSVYGFG 400
             +++ K  +A V  C     +     +G V  +G
Sbjct: 277 TLINTDKERMAEVAACHTSHTSAAKTQSGQVLMWG 311



 Score =  102 bits (253), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 70/237 (29%), Positives = 117/237 (49%), Gaps = 9/237 (3%)

Query: 230 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGSVVQIAAGPSYMLAVTGN 287
           ++T+   V   G+N  G LG GD      P+ I  L  +++ S+     GP   +A T +
Sbjct: 36  YVTVNDEVFALGTNCSGCLGLGDLQSTIEPRRIDALCGKKIVSL-SYGTGPHVAIA-TAD 93

Query: 288 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 347
           G V+S+G      LG+G  +  L P  + T    G  V+ V+ G  H +AL + G V+ W
Sbjct: 94  GEVFSWGHNGYSQLGNGTTNHGLTPALVST-NLLGKRVIEVACGSHHTIALTTDGEVFAW 152

Query: 348 GKGYCGALGHGDEIDKTLPEPLSS-LKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGS 406
           G    G +G G   ++  P  +SS L++   V +   +  +  ++D+G +YG+G+   G 
Sbjct: 153 GYNNSGQVGSGSTANQPTPRRVSSCLQNKAVVNIACGQLCSMAVLDSGEIYGWGYNCNGQ 212

Query: 407 LGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 463
           LG  + G      R   + +L+   V Q++ G  HT+ +TD G ++ +G N   QLG
Sbjct: 213 LGLGNNGNQQTPCR---IAALQGVSVIQVACGYAHTLALTDEGFVYAWGANSYGQLG 266



 Score = 94.7 bits (234), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 69/240 (28%), Positives = 116/240 (48%), Gaps = 3/240 (1%)

Query: 170 ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN-FT 228
           ++ N A +V  + +VF  G N S C G  D    I  PR ++AL G     ++ G     
Sbjct: 29  SAANEAIYVTVNDEVFALGTNCSGCLGLGDLQSTI-EPRRIDALCGKKIVSLSYGTGPHV 87

Query: 229 GFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG 288
              T  G V + G N + QLG+G T    TP  ++       V+++A G  + +A+T +G
Sbjct: 88  AIATADGEVFSWGHNGYSQLGNGTTNHGLTPALVSTNLLGKRVIEVACGSHHTIALTTDG 147

Query: 289 VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 348
            V+++G  ++  +G G   ++  PR + +  +    VV ++ G    +A+  SG +Y WG
Sbjct: 148 EVFAWGYNNSGQVGSGSTANQPTPRRVSSCLQNKA-VVNIACGQLCSMAVLDSGEIYGWG 206

Query: 349 KGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLG 408
               G LG G+  ++  P  +++L+    +QV      T  L D G VY +G   +G LG
Sbjct: 207 YNCNGQLGLGNNGNQQTPCRIAALQGVSVIQVACGYAHTLALTDEGFVYAWGANSYGQLG 266


>gi|259089405|ref|NP_001158608.1| probable E3 ubiquitin-protein ligase HERC6 isoform 2 [Homo sapiens]
 gi|55832764|gb|AAV66895.1| HERC6 splice variant [Homo sapiens]
          Length = 986

 Score =  112 bits (281), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 83/252 (32%), Positives = 121/252 (48%), Gaps = 5/252 (1%)

Query: 215 GVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQI 274
           G    Q  +G   +  L     V +CG N+ GQLG         P+ I  LE +  V  +
Sbjct: 22  GAELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGELPEPIQALETL-IVDLV 80

Query: 275 AAGPSYMLAVTGNGVVYSFGSGSNFCLGHGE-QHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           + G  + LAV   G V+++G+GS   LG GE +     P+ I T     I +++VS G  
Sbjct: 81  SCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKIMTL--NDIKIIQVSCGHY 138

Query: 334 HVVALDSSGYVYTWGKGYCGALGHGDEI-DKTLPEPLSSLKSHLAVQVCARKRKTFVLVD 392
           H +AL     V++WGK   G LG G E   +  P+ + SL+     QV A    +F L  
Sbjct: 139 HSLALSKDSQVFSWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSL 198

Query: 393 TGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLF 452
            G+ +G+G    G L    R V  +  +P  + +L+   V  IS G  HT V+T  G++F
Sbjct: 199 CGTSFGWGSNSAGQLALSGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGKVF 258

Query: 453 GFGDNERAQLGH 464
            FGDN   QLG+
Sbjct: 259 TFGDNRSGQLGY 270



 Score =  102 bits (255), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 89/302 (29%), Positives = 148/302 (49%), Gaps = 20/302 (6%)

Query: 163 AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 222
           A ++Q ++ E H+  +L + +V +CGDNS    G R   R    P  ++AL+ +    V+
Sbjct: 23  AELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGEL-PEPIQALETLIVDLVS 81

Query: 223 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRP-TPKSIAPLEEVGSVVQIAAGPSYM 281
            G   +  +  +G V   G+ + GQLG G+  +   TPK I  L ++  ++Q++ G  + 
Sbjct: 82  CGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKIMTLNDI-KIIQVSCGHYHS 140

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQH-DELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 340
           LA++ +  V+S+G  S+  LG G++   +  P+ +++   +GI + +V+AG  H  AL  
Sbjct: 141 LALSKDSQVFSWGKNSHGQLGLGKEFPSQASPQRVRSL--EGIPLAQVAAGGAHSFALSL 198

Query: 341 SGYVYTWGKGYCGAL---GHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVY 397
            G  + WG    G L   G    +    P  + +LK+   V +      T VL   G V+
Sbjct: 199 CGTSFGWGSNSAGQLALSGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGKVF 258

Query: 398 GFGWMGFGSLGF---PDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV-VTDRGRLFG 453
            FG    G LG+   P++     V R   +D L    VSQI  G YHT+  V   G++  
Sbjct: 259 TFGDNRSGQLGYSPTPEKRGPQLVER---IDGL----VSQIDCGSYHTLAYVHTTGQVVS 311

Query: 454 FG 455
           FG
Sbjct: 312 FG 313



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 79/297 (26%), Positives = 130/297 (43%), Gaps = 19/297 (6%)

Query: 114 MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHV 165
           +Q  +G  H+LL+ +N  V SCG +  G LG         PE  Q +    ++       
Sbjct: 26  LQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGELPEPIQALETLIVDL------ 79

Query: 166 VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 225
             VS  + H+  V   G+VF  G  S    G  +     F P+ +  L  +   QV+ G 
Sbjct: 80  --VSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKIMTLNDIKIIQVSCGH 137

Query: 226 NFTGFLTIRGHVHTCGSNTHGQLGHGDTL-DRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 284
             +  L+    V + G N+HGQLG G     + +P+ +  LE +  + Q+AAG ++  A+
Sbjct: 138 YHSLALSKDSQVFSWGKNSHGQLGLGKEFPSQASPQRVRSLEGI-PLAQVAAGGAHSFAL 196

Query: 285 TGNGVVYSFGSGSNFCLGHGEQHDELQP-RAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 343
           +  G  + +GS S   L    ++  +Q  + +     K + VV +S GD H   L   G 
Sbjct: 197 SLCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGK 256

Query: 344 VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 400
           V+T+G    G LG+    +K  P+ +  +   ++   C        +  TG V  FG
Sbjct: 257 VFTFGDNRSGQLGYSPTPEKRGPQLVERIDGLVSQIDCGSYHTLAYVHTTGQVVSFG 313


>gi|301122653|ref|XP_002909053.1| RCC1 and BTB domain-containing protein, putative [Phytophthora
           infestans T30-4]
 gi|262099815|gb|EEY57867.1| RCC1 and BTB domain-containing protein, putative [Phytophthora
           infestans T30-4]
          Length = 611

 Score =  112 bits (281), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 111/373 (29%), Positives = 161/373 (43%), Gaps = 47/373 (12%)

Query: 127 SNSSVFSCGSSLCGVLGHGP----ETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSG 182
           + + +FS G +  G L  G      T   V   RIN     HVV V+        + ++G
Sbjct: 28  NRAGLFSFGQNTYGELALGDTNDRSTPTRVDLGRIN--DTKHVVDVACGNEQTTILFENG 85

Query: 183 QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN-------FTG------ 229
            VFTCG N S  C    T R             VP  + + GL+       F+G      
Sbjct: 86  DVFTCGYNDSGQCAIGTTER-------------VPSLRFSPGLSSHHTVRLFSGNGSEHL 132

Query: 230 -FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS--VVQIAAGPSYMLAVTG 286
             L   G ++T G N  GQLG G      T      +EE+    VV +A    +   V  
Sbjct: 133 AALCANGFLYTVGFNMRGQLGLGTAT---TVTEATLVEELAGKRVVDVACSYFHTAIVMD 189

Query: 287 NGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYT 346
           NG +++ G      LG G+    L PR +  F R    V+ V+ G  + VA    G V  
Sbjct: 190 NGDLHACGCNDYGQLGMGDHSGHLVPRPVDYFFRHP--VLAVACGQHYTVASLRDGGVVA 247

Query: 347 WGKGYCGALGHGDEIDKT--LPEPLSS-LKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 403
           +GK   G LG  D + +   LP  L+  L   +  Q+      T ++ + G+VY FG   
Sbjct: 248 FGKNDHGQLGL-DRVSEPVLLPTRLAPPLDRAVVPQLSCGYHHTAIVTEDGAVYTFGRND 306

Query: 404 FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 463
           +G LG    G    + RP  ++SL    ++Q++ G YHT+ ++D G++F FG N   QLG
Sbjct: 307 YGQLGL---GHKLHMARPTPVESLSRMRITQVACGCYHTLALSDDGKVFPFGRNNHGQLG 363

Query: 464 HDTLRGCLEPTEI 476
            +T   CL P  I
Sbjct: 364 LETSMDCLSPQLI 376



 Score = 99.0 bits (245), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 100/354 (28%), Positives = 151/354 (42%), Gaps = 23/354 (6%)

Query: 97  LQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTR 156
           L  +  +  +V+ + GN Q T      +L  N  VF+CG +  G    G  TT+ V   R
Sbjct: 59  LGRINDTKHVVDVACGNEQTT------ILFENGDVFTCGYNDSGQCAIG--TTERVPSLR 110

Query: 157 INFP--SAAHVVQVSASE--NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEA 212
            + P  S+ H V++ +     H A +  +G ++T G N     G   T   +    LVE 
Sbjct: 111 FS-PGLSSHHTVRLFSGNGSEHLAALCANGFLYTVGFNMRGQLG-LGTATTVTEATLVEE 168

Query: 213 LKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV 272
           L G     V      T  +   G +H CG N +GQLG GD      P+ +        V+
Sbjct: 169 LAGKRVVDVACSYFHTAIVMDNGDLHACGCNDYGQLGMGDHSGHLVPRPVDYFFR-HPVL 227

Query: 273 QIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDE-LQPRAIQTFRRKGIHVVRVSAG 331
            +A G  Y +A   +G V +FG   +  LG     +  L P  +     + + V ++S G
Sbjct: 228 AVACGQHYTVASLRDGGVVAFGKNDHGQLGLDRVSEPVLLPTRLAPPLDRAV-VPQLSCG 286

Query: 332 DEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 391
             H   +   G VYT+G+   G LG G ++    P P+ SL      QV      T  L 
Sbjct: 287 YHHTAIVTEDGAVYTFGRNDYGQLGLGHKLHMARPTPVESLSRMRITQVACGCYHTLALS 346

Query: 392 DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVV 445
           D G V+ FG    G LG      S   L P+++ +LR      ++ G YH+V +
Sbjct: 347 DDGKVFPFGRNNHGQLGLE---TSMDCLSPQLISTLRN---KPVAAGFYHSVCL 394


>gi|149701724|ref|XP_001494887.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 [Equus
           caballus]
          Length = 988

 Score =  112 bits (281), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 78/219 (35%), Positives = 112/219 (51%), Gaps = 15/219 (6%)

Query: 259 PKSIAPLEEVGS-----------VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGE-Q 306
           P S +PLEE  +           V  ++ G  + LAV   G V+++G+GS   LG GE +
Sbjct: 25  PPSNSPLEETKNPEPIRTLETLRVSLVSCGQEHSLAVCHRGRVFAWGAGSEGQLGTGEVK 84

Query: 307 HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEI-DKTL 365
                P+ I+T    GI +++VS GD H +AL   G V++WGK   G LG G E   +  
Sbjct: 85  GINFTPKKIKTL--TGIKIIQVSCGDYHSLALSEGGQVFSWGKNSQGQLGLGKEFPSQDS 142

Query: 366 PEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILD 425
           P+ + SL+     QV A    +F L  +G+ +G+G    G L      V  +  +PR + 
Sbjct: 143 PQRVRSLEGIPLAQVAAGGAHSFALSVSGTSFGWGNNSAGQLALSGNNVPVQSYKPRSIG 202

Query: 426 SLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 464
           +LR   V  IS G  HT V+T  G++F FGDN   QLGH
Sbjct: 203 ALRNLGVIYISCGYEHTAVLTQNGKVFTFGDNSCGQLGH 241



 Score = 85.5 bits (210), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 67/237 (28%), Positives = 109/237 (45%), Gaps = 7/237 (2%)

Query: 168 VSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF 227
           VS  + H+  V   G+VF  G  S    G  +     F P+ ++ L G+   QV+ G   
Sbjct: 51  VSCGQEHSLAVCHRGRVFAWGAGSEGQLGTGEVKGINFTPKKIKTLTGIKIIQVSCGDYH 110

Query: 228 TGFLTIRGHVHTCGSNTHGQLGHGDTL-DRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTG 286
           +  L+  G V + G N+ GQLG G     + +P+ +  LE +  + Q+AAG ++  A++ 
Sbjct: 111 SLALSEGGQVFSWGKNSQGQLGLGKEFPSQDSPQRVRSLEGI-PLAQVAAGGAHSFALSV 169

Query: 287 NGVVYSFGSGSNFCL---GHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 343
           +G  + +G+ S   L   G+       +PR+I   R  G  V+ +S G EH   L  +G 
Sbjct: 170 SGTSFGWGNNSAGQLALSGNNVPVQSYKPRSIGALRNLG--VIYISCGYEHTAVLTQNGK 227

Query: 344 VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 400
           V+T+G   CG LGH        P+ +  +   ++   C        +  TG V  FG
Sbjct: 228 VFTFGDNSCGQLGHSPSAQDRGPQLVERIDGLVSQIDCGSYHTLAYVYTTGQVVSFG 284



 Score = 81.6 bits (200), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 74/259 (28%), Positives = 122/259 (47%), Gaps = 21/259 (8%)

Query: 207 PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLD-RPTPKSIAPL 265
           P  +  L+ +    V+ G   +  +  RG V   G+ + GQLG G+      TPK I  L
Sbjct: 37  PEPIRTLETLRVSLVSCGQEHSLAVCHRGRVFAWGAGSEGQLGTGEVKGINFTPKKIKTL 96

Query: 266 EEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH-DELQPRAIQTFRRKGIH 324
             +  ++Q++ G  + LA++  G V+S+G  S   LG G++   +  P+ +++   +GI 
Sbjct: 97  TGI-KIIQVSCGDYHSLALSEGGQVFSWGKNSQGQLGLGKEFPSQDSPQRVRSL--EGIP 153

Query: 325 VVRVSAGDEHVVALDSSGYVYTWGKGYCGAL---GHGDEIDKTLPEPLSSLKSHLAVQVC 381
           + +V+AG  H  AL  SG  + WG    G L   G+   +    P  + +L++   + + 
Sbjct: 154 LAQVAAGGAHSFALSVSGTSFGWGNNSAGQLALSGNNVPVQSYKPRSIGALRNLGVIYIS 213

Query: 382 ARKRKTFVLVDTGSVYGFGWMGFGSLGFP----DRGVSDKVLRPRILDSLRAHHVSQIST 437
                T VL   G V+ FG    G LG      DRG       P++++ +    VSQI  
Sbjct: 214 CGYEHTAVLTQNGKVFTFGDNSCGQLGHSPSAQDRG-------PQLVERIDG-LVSQIDC 265

Query: 438 GLYHTVV-VTDRGRLFGFG 455
           G YHT+  V   G++  FG
Sbjct: 266 GSYHTLAYVYTTGQVVSFG 284



 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 72/240 (30%), Positives = 120/240 (50%), Gaps = 17/240 (7%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFT--RINFPSAAHVVQVSASE 172
           ++ G+ H+L + +   VF+ G+   G LG G    + ++FT  +I   +   ++QVS  +
Sbjct: 51  VSCGQEHSLAVCHRGRVFAWGAGSEGQLGTG--EVKGINFTPKKIKTLTGIKIIQVSCGD 108

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            H+  + + GQVF+ G NS    G          P+ V +L+G+P  QV AG   +  L+
Sbjct: 109 YHSLALSEGGQVFSWGKNSQGQLGLGKEFPSQDSPQRVRSLEGIPLAQVAAGGAHSFALS 168

Query: 233 IRGHVHTCGSNTHGQL---GHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 289
           + G     G+N+ GQL   G+   +    P+SI  L  +G V+ I+ G  +   +T NG 
Sbjct: 169 VSGTSFGWGNNSAGQLALSGNNVPVQSYKPRSIGALRNLG-VIYISCGYEHTAVLTQNGK 227

Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 349
           V++FG  S   LGH     +  P+ ++  R  G+ V ++  G  H +A     YVYT G+
Sbjct: 228 VFTFGDNSCGQLGHSPSAQDRGPQLVE--RIDGL-VSQIDCGSYHTLA-----YVYTTGQ 279


>gi|74177548|dbj|BAB30989.3| unnamed protein product [Mus musculus]
          Length = 596

 Score =  112 bits (281), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 73/227 (32%), Positives = 117/227 (51%), Gaps = 5/227 (2%)

Query: 238 HTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 297
           ++CG N+ GQLG         P+ I  L ++  V  ++ G  + +AV   G V+ +G+GS
Sbjct: 1   YSCGDNSWGQLGQRRDQSTERPEPIQALNDL-HVDLVSCGKEHSVAVCHKGKVFPWGAGS 59

Query: 298 NFCLGHGE-QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 356
              LG GE +     P  I+     GI +++VS G  H +AL   G+V++WG+   G LG
Sbjct: 60  EGQLGIGEFKEISFMPTKIKAL--AGIKIIQVSCGHYHSLALSEDGHVFSWGRNSEGQLG 117

Query: 357 HG-DEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVS 415
            G +   + +P+ + SL+     QV A    +F L  TG+ +G+G    G L      V 
Sbjct: 118 LGKNSRSQAIPQKVKSLEGIPLAQVAAGGTHSFALSLTGTSFGWGSNRSGQLALSGNKVK 177

Query: 416 DKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQL 462
           +++ +P  + +L+   V  IS G  HT V+T+ G++F FG N   QL
Sbjct: 178 EQIYKPHSIGALKNLSVIYISCGYEHTAVLTEEGQVFTFGGNSSGQL 224



 Score = 83.2 bits (204), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 78/282 (27%), Positives = 124/282 (43%), Gaps = 26/282 (9%)

Query: 132 FSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQV 184
           +SCG +  G LG         PE  Q ++          HV  VS  + H+  V   G+V
Sbjct: 1   YSCGDNSWGQLGQRRDQSTERPEPIQALN--------DLHVDLVSCGKEHSVAVCHKGKV 52

Query: 185 FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNT 244
           F  G  S    G  +     F P  ++AL G+   QV+ G   +  L+  GHV + G N+
Sbjct: 53  FPWGAGSEGQLGIGEFKEISFMPTKIKALAGIKIIQVSCGHYHSLALSEDGHVFSWGRNS 112

Query: 245 HGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN----F 299
            GQLG G ++  +  P+ +  LE +  + Q+AAG ++  A++  G   SFG GSN     
Sbjct: 113 EGQLGLGKNSRSQAIPQKVKSLEGI-PLAQVAAGGTHSFALSLTGT--SFGWGSNRSGQL 169

Query: 300 CLGHGEQHDEL-QPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 358
            L   +  +++ +P +I     K + V+ +S G EH   L   G V+T+G    G L   
Sbjct: 170 ALSGNKVKEQIYKPHSIGAL--KNLSVIYISCGYEHTAVLTEEGQVFTFGGNSSGQLQPS 227

Query: 359 DEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 400
               +  P+ +  +   ++   CA       +  TG V   G
Sbjct: 228 PRSGQRGPQLIEGIGGRVSQIECASYHTIAYVYTTGQVVSLG 269



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 67/238 (28%), Positives = 111/238 (46%), Gaps = 13/238 (5%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           ++ G+ H++ + +   VF  G+   G LG G         T+I   +   ++QVS    H
Sbjct: 36  VSCGKEHSVAVCHKGKVFPWGAGSEGQLGIGEFKEISFMPTKIKALAGIKIIQVSCGHYH 95

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 234
           +  + + G VF+ G NS    G    +R    P+ V++L+G+P  QV AG   +  L++ 
Sbjct: 96  SLALSEDGHVFSWGRNSEGQLGLGKNSRSQAIPQKVKSLEGIPLAQVAAGGTHSFALSLT 155

Query: 235 GHVHTCGSNTHGQLG-HGDTLDRP--TPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
           G     GSN  GQL   G+ +      P SI  L+ + SV+ I+ G  +   +T  G V+
Sbjct: 156 GTSFGWGSNRSGQLALSGNKVKEQIYKPHSIGALKNL-SVIYISCGYEHTAVLTEEGQVF 214

Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 349
           +FG  S+  L    +  +  P+ I+     G  V ++     H +A     YVYT G+
Sbjct: 215 TFGGNSSGQLQPSPRSGQRGPQLIEGI---GGRVSQIECASYHTIA-----YVYTTGQ 264



 Score = 48.1 bits (113), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 32/120 (26%), Positives = 55/120 (45%), Gaps = 4/120 (3%)

Query: 345 YTWGKGYCGALGHGDEIDKTLPEPLSSLKS-HLAVQVCARKRKTFVLVDTGSVYGFGWMG 403
           Y+ G    G LG   +     PEP+ +L   H+ +  C  K  +  +   G V+ +G   
Sbjct: 1   YSCGDNSWGQLGQRRDQSTERPEPIQALNDLHVDLVSCG-KEHSVAVCHKGKVFPWGAGS 59

Query: 404 FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 463
            G LG  +    +    P  + +L    + Q+S G YH++ +++ G +F +G N   QLG
Sbjct: 60  EGQLGIGE--FKEISFMPTKIKALAGIKIIQVSCGHYHSLALSEDGHVFSWGRNSEGQLG 117


>gi|428173156|gb|EKX42060.1| hypothetical protein GUITHDRAFT_95823 [Guillardia theta CCMP2712]
          Length = 546

 Score =  112 bits (281), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 79/248 (31%), Positives = 124/248 (50%), Gaps = 13/248 (5%)

Query: 213 LKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV 272
           L+ V    ++ G      +T  G V+T G   +GQLGHGD +D+  P+ +  ++  G V 
Sbjct: 270 LRRVVFSALSFGAGHCAAVTDTGLVYTWGQGRYGQLGHGDDVDKIIPQPVPRIK--GEVK 327

Query: 273 QIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGD 332
            ++AG  + +AVT +G ++++G G    LGH +    L P  +  F   G+ V    AG 
Sbjct: 328 SVSAGFYHTVAVTHHGALFTWGDGKEGKLGHNDNAQRLIPTLVAAFIEWGMPVAAAQAGG 387

Query: 333 EHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVD 392
            H + L+  G V+++G G  G LGHG++ D+  P  LS+L+S   V + A    +  L D
Sbjct: 388 SHTLVLNRRGQVFSFGSGDSGRLGHGNDNDQWSPTFLSALESERCVSIAAGFAHSVALTD 447

Query: 393 TGSVYGFGWMGFGSLGFPDRGVSDKVLRPRIL-----DSLRAHHVSQISTGLYHTVVVTD 447
            G +Y +G    G LG      SD+VL PR L     D+++A     ++ G  HT +   
Sbjct: 448 QGQIYTWGCGKLGRLGHGSD--SDEVL-PRKLALISHDTIKA---IAVAAGEAHTCIFRS 501

Query: 448 RGRLFGFG 455
            G L   G
Sbjct: 502 EGSLITLG 509



 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 77/232 (33%), Positives = 109/232 (46%), Gaps = 10/232 (4%)

Query: 131 VFSCGSSLCGVLGHGPETTQCVS--FTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCG 188
           V++ G    G LGHG +  + +     RI       V  VSA   H   V   G +FT G
Sbjct: 294 VYTWGQGRYGQLGHGDDVDKIIPQPVPRIK----GEVKSVSAGFYHTVAVTHHGALFTWG 349

Query: 189 DNSSFCCGHRDTNRPIFRPRLVEAL--KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHG 246
           D      GH D  + +  P LV A    G+P     AG + T  L  RG V + GS   G
Sbjct: 350 DGKEGKLGHNDNAQRLI-PTLVAAFIEWGMPVAAAQAGGSHTLVLNRRGQVFSFGSGDSG 408

Query: 247 QLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ 306
           +LGHG+  D+ +P  ++ LE     V IAAG ++ +A+T  G +Y++G G    LGHG  
Sbjct: 409 RLGHGNDNDQWSPTFLSALES-ERCVSIAAGFAHSVALTDQGQIYTWGCGKLGRLGHGSD 467

Query: 307 HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 358
            DE+ PR +       I  + V+AG+ H     S G + T G+   G +  G
Sbjct: 468 SDEVLPRKLALISHDTIKAIAVAAGEAHTCIFRSEGSLITLGRVSHGRMAEG 519



 Score = 92.0 bits (227), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 64/194 (32%), Positives = 99/194 (51%), Gaps = 10/194 (5%)

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           ++ G  +  AVT  G+VY++G G    LGHG+  D++ P+ +   R KG  V  VSAG  
Sbjct: 278 LSFGAGHCAAVTDTGLVYTWGQGRYGQLGHGDDVDKIIPQPVP--RIKG-EVKSVSAGFY 334

Query: 334 HVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARK---RKTFVL 390
           H VA+   G ++TWG G  G LGH D   + +P  +++      + V A +     T VL
Sbjct: 335 HTVAVTHHGALFTWGDGKEGKLGHNDNAQRLIPTLVAAFI-EWGMPVAAAQAGGSHTLVL 393

Query: 391 VDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGR 450
              G V+ FG    G LG    G  +    P  L +L +     I+ G  H+V +TD+G+
Sbjct: 394 NRRGQVFSFGSGDSGRLG---HGNDNDQWSPTFLSALESERCVSIAAGFAHSVALTDQGQ 450

Query: 451 LFGFGDNERAQLGH 464
           ++ +G  +  +LGH
Sbjct: 451 IYTWGCGKLGRLGH 464



 Score = 77.8 bits (190), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 53/173 (30%), Positives = 86/173 (49%), Gaps = 14/173 (8%)

Query: 320 RKGIHVVR------VSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
           R G+ ++R      +S G  H  A+  +G VYTWG+G  G LGHGD++DK +P+P+  +K
Sbjct: 264 RAGLSLLRRVVFSALSFGAGHCAAVTDTGLVYTWGQGRYGQLGHGDDVDKIIPQPVPRIK 323

Query: 374 SHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSL--RAHH 431
             +   V A    T  +   G+++ +G    G LG  D     + L P ++ +       
Sbjct: 324 GEVK-SVSAGFYHTVAVTHHGALFTWGDGKEGKLGHNDNA---QRLIPTLVAAFIEWGMP 379

Query: 432 VSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQEMEED 484
           V+    G  HT+V+  RG++F FG  +  +LGH        PT  F+  +E +
Sbjct: 380 VAAAQAGGSHTLVLNRRGQVFSFGSGDSGRLGHGNDNDQWSPT--FLSALESE 430


>gi|313236983|emb|CBY12230.1| unnamed protein product [Oikopleura dioica]
          Length = 1048

 Score =  112 bits (281), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 93/308 (30%), Positives = 144/308 (46%), Gaps = 17/308 (5%)

Query: 107 VETSAGNMQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHV 165
           ++ +   + I +G  HT+ L S   V+SCGS+  G LG   + +QC       F  A  +
Sbjct: 27  IDANQSVISIASGLRHTVYLTSTRKVYSCGSNEFGQLGQ--QKSQCRPSLVTGF-GAEEI 83

Query: 166 VQVSASENHAAFVLQSGQVFTCGD--NSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTA 223
             V+A +  +  + +SG +F  G   N    C        +  P+L++ +      QV  
Sbjct: 84  FHVAAGDFFSIAIAESGLLFGWGRSLNGELMCKQDS----LHEPKLLDKIMHWSVVQVAC 139

Query: 224 GLNFTGFLTIRGHVHTCGSNTHGQLGHGDT-LDRPTPKSIAPLEEVGSVVQIAAGPSYML 282
           G      LT  G + + GSNT GQLG G + ++   P  IA L     + QI AG  +  
Sbjct: 140 GAQHCIALTEEGTILSWGSNTQGQLGLGSSEIEFLEPTIIASLNAF-PISQICAGAYHSG 198

Query: 283 AVTGNGVVYSFGSGSNFCLGHGEQHDELQ--PRAIQTFRRKGIHVVRVSAGDEHVVALDS 340
            ++ +G ++++G  +   LGHG   D  Q  PR ++T R +   VV V+ G+EH V    
Sbjct: 199 VLSPSGTLFTWGKNNWGQLGHGNS-DSFQSSPRLVKTLRHQ--EVVFVAMGEEHSVCRTR 255

Query: 341 SGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 400
           +G V++WG G  G LGH    + T P+ +  L      Q+C  +R T  L D   + GFG
Sbjct: 256 NGGVFSWGHGGNGQLGHNSMANVTQPKKIMELMGTTVCQICCGRRHTISLTDKRKLLGFG 315

Query: 401 WMGFGSLG 408
                 LG
Sbjct: 316 LNSNNQLG 323



 Score =  108 bits (271), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 82/265 (30%), Positives = 136/265 (51%), Gaps = 23/265 (8%)

Query: 221 VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 280
           + +GL  T +LT    V++CGSN  GQLG   +  RP+  +    EE+     +AAG  +
Sbjct: 36  IASGLRHTVYLTSTRKVYSCGSNEFGQLGQQKSQCRPSLVTGFGAEEI---FHVAAGDFF 92

Query: 281 MLAVTGNGVVYSFGSGSNFCLGHGE---QHDEL-QPRAIQTFRRKGIH--VVRVSAGDEH 334
            +A+  +G+++ +G   N     GE   + D L +P+ +     K +H  VV+V+ G +H
Sbjct: 93  SIAIAESGLLFGWGRSLN-----GELMCKQDSLHEPKLLD----KIMHWSVVQVACGAQH 143

Query: 335 VVALDSSGYVYTWGKGYCGALGHGD-EIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDT 393
            +AL   G + +WG    G LG G  EI+   P  ++SL +    Q+CA    + VL  +
Sbjct: 144 CIALTEEGTILSWGSNTQGQLGLGSSEIEFLEPTIIASLNAFPISQICAGAYHSGVLSPS 203

Query: 394 GSVYGFGWMGFGSLGFPDRGVSDKVLR-PRILDSLRAHHVSQISTGLYHTVVVTDRGRLF 452
           G+++ +G   +G LG    G SD     PR++ +LR   V  ++ G  H+V  T  G +F
Sbjct: 204 GTLFTWGKNNWGQLG---HGNSDSFQSSPRLVKTLRHQEVVFVAMGEEHSVCRTRNGGVF 260

Query: 453 GFGDNERAQLGHDTLRGCLEPTEIF 477
            +G     QLGH+++    +P +I 
Sbjct: 261 SWGHGGNGQLGHNSMANVTQPKKIM 285



 Score =  105 bits (263), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 94/338 (27%), Positives = 152/338 (44%), Gaps = 20/338 (5%)

Query: 131 VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDN 190
           ++  G +  G LG G E       + I+  +   V+ +++   H  ++  + +V++CG N
Sbjct: 1   MYGWGKNDYGQLGLGSENMLISCPSPID--ANQSVISIASGLRHTVYLTSTRKVYSCGSN 58

Query: 191 SSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLG- 249
                G     +   RP LV          V AG  F+  +   G +   G + +G+L  
Sbjct: 59  E---FGQLGQQKSQCRPSLVTGFGAEEIFHVAAGDFFSIAIAESGLLFGWGRSLNGELMC 115

Query: 250 HGDTLDRPTPKSIAPLEEV--GSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH 307
             D+L  P       L+++   SVVQ+A G  + +A+T  G + S+GS +   LG G   
Sbjct: 116 KQDSLHEP-----KLLDKIMHWSVVQVACGAQHCIALTEEGTILSWGSNTQGQLGLGSSE 170

Query: 308 DE-LQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEID-KTL 365
            E L+P  I +       + ++ AG  H   L  SG ++TWGK   G LGHG+    ++ 
Sbjct: 171 IEFLEPTIIASL--NAFPISQICAGAYHSGVLSPSGTLFTWGKNNWGQLGHGNSDSFQSS 228

Query: 366 PEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILD 425
           P  + +L+    V V   +  +      G V+ +G  G G LG         V +P+ + 
Sbjct: 229 PRLVKTLRHQEVVFVAMGEEHSVCRTRNGGVFSWGHGGNGQLGHNSMA---NVTQPKKIM 285

Query: 426 SLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 463
            L    V QI  G  HT+ +TD+ +L GFG N   QLG
Sbjct: 286 ELMGTTVCQICCGRRHTISLTDKRKLLGFGLNSNNQLG 323



 Score = 89.0 bits (219), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 70/230 (30%), Positives = 112/230 (48%), Gaps = 13/230 (5%)

Query: 237 VHTCGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 295
           ++  G N +GQLG G + +    P   +P++   SV+ IA+G  + + +T    VYS GS
Sbjct: 1   MYGWGKNDYGQLGLGSENMLISCP---SPIDANQSVISIASGLRHTVYLTSTRKVYSCGS 57

Query: 296 GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGAL 355
                LG  +Q  + +P  +  F  +   +  V+AGD   +A+  SG ++ WG+   G L
Sbjct: 58  NEFGQLG--QQKSQCRPSLVTGFGAE--EIFHVAAGDFFSIAIAESGLLFGWGRSLNGEL 113

Query: 356 G-HGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGV 414
               D + +  P+ L  +     VQV    +    L + G++  +G    G LG     +
Sbjct: 114 MCKQDSLHE--PKLLDKIMHWSVVQVACGAQHCIALTEEGTILSWGSNTQGQLGLGSSEI 171

Query: 415 SDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 464
             + L P I+ SL A  +SQI  G YH+ V++  G LF +G N   QLGH
Sbjct: 172 --EFLEPTIIASLNAFPISQICAGAYHSGVLSPSGTLFTWGKNNWGQLGH 219


>gi|219847607|ref|YP_002462040.1| chromosome condensation regulator RCC1 [Chloroflexus aggregans DSM
           9485]
 gi|219541866|gb|ACL23604.1| regulator of chromosome condensation RCC1 [Chloroflexus aggregans
           DSM 9485]
          Length = 776

 Score =  112 bits (281), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 108/360 (30%), Positives = 158/360 (43%), Gaps = 29/360 (8%)

Query: 111 AGNMQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS 169
           +G   I  G YHT  ++ S  V+  G +  G LG G  T +         PS   V  ++
Sbjct: 308 SGVTAIAAGDYHTCALTGSGGVWCWGGNYSGQLGDGTTTARSTPVAVSGLPSG--VETIA 365

Query: 170 ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNR-----PIFRPRLVEALKGVP--CKQVT 222
           A + H   ++ SG V         C GH D  +        R   V A+ G+P     + 
Sbjct: 366 AGDYHTCALMSSGGVR--------CWGHNDRGQLGDGTTTARSTPV-AVSGLPSGVTAIA 416

Query: 223 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 282
           AG   T   T  G V   G N+ GQLG G   D  TP +++ L     V  IAAG  +  
Sbjct: 417 AGRLHTCARTSSGGVWCWGDNSDGQLGDGSFTDSSTPVAVSGLAS--GVETIAAGGWHTC 474

Query: 283 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
           A+TG+G V+ +G  ++  LG G     + P A+         V  ++AG  H  AL  SG
Sbjct: 475 ALTGSGGVWCWGRNNSGQLGDGSTIYHITPVAVSGLPSG---VTAIAAGGVHTCALTGSG 531

Query: 343 YVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWM 402
            V+ WG  + G LG G   D++ P  +S L S +   + A    T  L  +G V+ +G  
Sbjct: 532 GVWCWGGNFAGQLGDGTTTDRSTPVAVSGLPSGV-TAIAAGDIHTCALTGSGGVWCWGGN 590

Query: 403 GFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQL 462
            FG LG    G +     P  +  L +  V+ I+ GL +T  +T  G ++ +G N   QL
Sbjct: 591 DFGQLG---DGTTTNRSTPVAVSGLPS-GVTAIAAGLRYTCALTGSGGVWCWGYNLSGQL 646



 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 111/372 (29%), Positives = 158/372 (42%), Gaps = 25/372 (6%)

Query: 111 AGNMQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS 169
           +G   I  G  HT  L S+  V+  GS+  G LG G  TT+         PS   V  ++
Sbjct: 104 SGVTAIAAGGAHTCALTSSGEVWCWGSNFYGQLGDGSYTTRSTPVAVSGLPSG--VTAIA 161

Query: 170 ASENHAAFVLQSGQVFTCGDNSSFCCGH---RDTNRPIFRPRLVEALKGVPCK--QVTAG 224
           A   H      SG V+  G N     G     D + P+       A+ G+P +   + AG
Sbjct: 162 AGGWHTCARTSSGGVWCWGGNYRGQLGDGTTTDRSTPV-------AVSGLPSEVTAIAAG 214

Query: 225 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 284
              T      G V   G N +GQLG G   D  TP +++ L     V  IAAG  +  A+
Sbjct: 215 DAHTCARMSSGEVWCWGGNNYGQLGDGSYTDSSTPVAVSGLPS--GVTAIAAGGVHTCAL 272

Query: 285 TGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           TG+G V  +G+  +  LG+G       P A+         V  ++AGD H  AL  SG V
Sbjct: 273 TGSGGVRCWGANYSGQLGNGLTFGRSTPGAVSGLPSG---VTAIAAGDYHTCALTGSGGV 329

Query: 345 YTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGF 404
           + WG  Y G LG G    ++ P  +S L S +   + A    T  L+ +G V  +G    
Sbjct: 330 WCWGGNYSGQLGDGTTTARSTPVAVSGLPSGVET-IAAGDYHTCALMSSGGVRCWGHNDR 388

Query: 405 GSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 464
           G LG    G +     P  +  L +  V+ I+ G  HT   T  G ++ +GDN   QLG 
Sbjct: 389 GQLG---DGTTTARSTPVAVSGLPS-GVTAIAAGRLHTCARTSSGGVWCWGDNSDGQLGD 444

Query: 465 DTLRGCLEPTEI 476
            +      P  +
Sbjct: 445 GSFTDSSTPVAV 456



 Score =  104 bits (260), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 110/359 (30%), Positives = 156/359 (43%), Gaps = 19/359 (5%)

Query: 111 AGNMQITTGRYHTLLISNSSVFSC-GSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS 169
           +G   I  G  HT  ++ S    C G++  G LG+G    +         PS   V  ++
Sbjct: 257 SGVTAIAAGGVHTCALTGSGGVRCWGANYSGQLGNGLTFGRSTPGAVSGLPSG--VTAIA 314

Query: 170 ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVP--CKQVTAGLNF 227
           A + H   +  SG V+  G N S   G         R   V A+ G+P   + + AG   
Sbjct: 315 AGDYHTCALTGSGGVWCWGGNYS---GQLGDGTTTARSTPV-AVSGLPSGVETIAAGDYH 370

Query: 228 TGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN 287
           T  L   G V   G N  GQLG G T  R TP +++ L     V  IAAG  +  A T +
Sbjct: 371 TCALMSSGGVRCWGHNDRGQLGDGTTTARSTPVAVSGLPS--GVTAIAAGRLHTCARTSS 428

Query: 288 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 347
           G V+ +G  S+  LG G   D   P A+         V  ++AG  H  AL  SG V+ W
Sbjct: 429 GGVWCWGDNSDGQLGDGSFTDSSTPVAVSGLASG---VETIAAGGWHTCALTGSGGVWCW 485

Query: 348 GKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSL 407
           G+   G LG G  I    P  +S L S +   + A    T  L  +G V+ +G    G L
Sbjct: 486 GRNNSGQLGDGSTIYHITPVAVSGLPSGV-TAIAAGGVHTCALTGSGGVWCWGGNFAGQL 544

Query: 408 GFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDT 466
           G  D   +D+   P  +  L +  V+ I+ G  HT  +T  G ++ +G N+  QLG  T
Sbjct: 545 G--DGTTTDRS-TPVAVSGLPSG-VTAIAAGDIHTCALTGSGGVWCWGGNDFGQLGDGT 599



 Score = 99.8 bits (247), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 113/401 (28%), Positives = 159/401 (39%), Gaps = 69/401 (17%)

Query: 116 ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           I  G YHT  L+S+  V   G +  G LG G  T +         PS   V  ++A   H
Sbjct: 364 IAAGDYHTCALMSSGGVRCWGHNDRGQLGDGTTTARSTPVAVSGLPSG--VTAIAAGRLH 421

Query: 175 AAFVLQSGQVFTCGDNSSFCCGH---RDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
                 SG V+  GDNS    G     D++ P+    L   ++      + AG   T  L
Sbjct: 422 TCARTSSGGVWCWGDNSDGQLGDGSFTDSSTPVAVSGLASGVE-----TIAAGGWHTCAL 476

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
           T  G V   G N  GQLG G T+   TP +++ L     V  IAAG  +  A+TG+G V+
Sbjct: 477 TGSGGVWCWGRNNSGQLGDGSTIYHITPVAVSGLPS--GVTAIAAGGVHTCALTGSGGVW 534

Query: 292 SFGSGSNFC--LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 349
            +G   NF   LG G   D   P A+         V  ++AGD H  AL  SG V+ WG 
Sbjct: 535 CWGG--NFAGQLGDGTTTDRSTPVAVSGLPSG---VTAIAAGDIHTCALTGSGGVWCWGG 589

Query: 350 GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSL-- 407
              G LG G   +++ P  +S L S +   + A  R T  L  +G V+ +G+   G L  
Sbjct: 590 NDFGQLGDGTTTNRSTPVAVSGLPSGV-TAIAAGLRYTCALTGSGGVWCWGYNLSGQLDD 648

Query: 408 ------------GFPD---------------------------------RGVSDKVLRPR 422
                       G P                                   G + K   P 
Sbjct: 649 GTTSRSTPVAVSGLPSGVTAIAAGGWYTCARTSSGGVRCWGANGSGQLGDGTTTKRSTPV 708

Query: 423 ILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 463
            +  L +  V+ I+ G  HT  +   G ++ +G N+  QLG
Sbjct: 709 AVSGLPSG-VTAIAAGGEHTCALMSSGGVWCWGRNDSGQLG 748



 Score = 89.7 bits (221), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 82/264 (31%), Positives = 118/264 (44%), Gaps = 12/264 (4%)

Query: 213 LKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV 272
           L+GV    + AG   T   T  G V   G N  G+LG G   D  TP +++ L     V 
Sbjct: 52  LQGV--TAIAAGGGHTCARTSSGGVWCWGGNDFGRLGDGSYTDSSTPVAVSGLPS--GVT 107

Query: 273 QIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGD 332
            IAAG ++  A+T +G V+ +GS     LG G       P A+         V  ++AG 
Sbjct: 108 AIAAGGAHTCALTSSGEVWCWGSNFYGQLGDGSYTTRSTPVAVSGLPSG---VTAIAAGG 164

Query: 333 EHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVD 392
            H  A  SSG V+ WG  Y G LG G   D++ P  +S L S +   + A    T   + 
Sbjct: 165 WHTCARTSSGGVWCWGGNYRGQLGDGTTTDRSTPVAVSGLPSEV-TAIAAGDAHTCARMS 223

Query: 393 TGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLF 452
           +G V+ +G   +G LG  D   +D    P  +  L +  V+ I+ G  HT  +T  G + 
Sbjct: 224 SGEVWCWGGNNYGQLG--DGSYTDSS-TPVAVSGLPS-GVTAIAAGGVHTCALTGSGGVR 279

Query: 453 GFGDNERAQLGHDTLRGCLEPTEI 476
            +G N   QLG+    G   P  +
Sbjct: 280 CWGANYSGQLGNGLTFGRSTPGAV 303



 Score = 85.9 bits (211), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 86/259 (33%), Positives = 113/259 (43%), Gaps = 15/259 (5%)

Query: 111 AGNMQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS 169
           +G   I  G  HT  ++ S  V+  G +  G LG G  T +         PS   V  ++
Sbjct: 512 SGVTAIAAGGVHTCALTGSGGVWCWGGNFAGQLGDGTTTDRSTPVAVSGLPSG--VTAIA 569

Query: 170 ASENHAAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEAL-KGVPCKQVTAGLNF 227
           A + H   +  SG V+  G N     G    TNR    P  V  L  GV    + AGL +
Sbjct: 570 AGDIHTCALTGSGGVWCWGGNDFGQLGDGTTTNRST--PVAVSGLPSGV--TAIAAGLRY 625

Query: 228 TGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN 287
           T  LT  G V   G N  GQL  G T  R TP +++ L     V  IAAG  Y  A T +
Sbjct: 626 TCALTGSGGVWCWGYNLSGQLDDG-TTSRSTPVAVSGLPS--GVTAIAAGGWYTCARTSS 682

Query: 288 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 347
           G V  +G+  +  LG G       P A+         V  ++AG EH  AL SSG V+ W
Sbjct: 683 GGVRCWGANGSGQLGDGTTTKRSTPVAVSGLPSG---VTAIAAGGEHTCALMSSGGVWCW 739

Query: 348 GKGYCGALGHGDEIDKTLP 366
           G+   G LG G  + +T P
Sbjct: 740 GRNDSGQLGDGRPLYRTTP 758



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 87/297 (29%), Positives = 126/297 (42%), Gaps = 22/297 (7%)

Query: 110 SAGNMQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQV 168
           ++G   I  G +HT  ++ S  V+  G +  G LG G              PS   V  +
Sbjct: 460 ASGVETIAAGGWHTCALTGSGGVWCWGRNNSGQLGDGSTIYHITPVAVSGLPSG--VTAI 517

Query: 169 SASENHAAFVLQSGQVFTCGDNSSFCCGH---RDTNRPIFRPRLVEALKGVP--CKQVTA 223
           +A   H   +  SG V+  G N +   G     D + P+       A+ G+P     + A
Sbjct: 518 AAGGVHTCALTGSGGVWCWGGNFAGQLGDGTTTDRSTPV-------AVSGLPSGVTAIAA 570

Query: 224 GLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
           G   T  LT  G V   G N  GQLG G T +R TP +++ L     V  IAAG  Y  A
Sbjct: 571 GDIHTCALTGSGGVWCWGGNDFGQLGDGTTTNRSTPVAVSGLPS--GVTAIAAGLRYTCA 628

Query: 284 VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 343
           +TG+G V+ +G   +  L  G       P A+         V  ++AG  +  A  SSG 
Sbjct: 629 LTGSGGVWCWGYNLSGQLDDGTTSRS-TPVAVSGLPSG---VTAIAAGGWYTCARTSSGG 684

Query: 344 VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 400
           V  WG    G LG G    ++ P  +S L S +   + A    T  L+ +G V+ +G
Sbjct: 685 VRCWGANGSGQLGDGTTTKRSTPVAVSGLPSGV-TAIAAGGEHTCALMSSGGVWCWG 740



 Score = 55.5 bits (132), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 63/217 (29%), Positives = 91/217 (41%), Gaps = 10/217 (4%)

Query: 111 AGNMQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS 169
           +G   I  G  HT  ++ S  V+  G +  G LG G  T +         PS   V  ++
Sbjct: 563 SGVTAIAAGDIHTCALTGSGGVWCWGGNDFGQLGDGTTTNRSTPVAVSGLPSG--VTAIA 620

Query: 170 ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEAL-KGVPCKQVTAGLNFT 228
           A   +   +  SG V+  G N S       T+R    P  V  L  GV    + AG  +T
Sbjct: 621 AGLRYTCALTGSGGVWCWGYNLSGQLDDGTTSRST--PVAVSGLPSGV--TAIAAGGWYT 676

Query: 229 GFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG 288
              T  G V   G+N  GQLG G T  R TP +++ L     V  IAAG  +  A+  +G
Sbjct: 677 CARTSSGGVRCWGANGSGQLGDGTTTKRSTPVAVSGLPS--GVTAIAAGGEHTCALMSSG 734

Query: 289 VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHV 325
            V+ +G   +  LG G       P  + T    G+++
Sbjct: 735 GVWCWGRNDSGQLGDGRPLYRTTPVDVVTSASWGVYL 771


>gi|444912395|ref|ZP_21232559.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
 gi|444716977|gb|ELW57814.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
          Length = 391

 Score =  112 bits (281), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 104/357 (29%), Positives = 155/357 (43%), Gaps = 19/357 (5%)

Query: 122 HTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
           HTL +  + +V++ G +  G LG G   ++    T    P  + V+ V+A  NH+  +  
Sbjct: 49  HTLALRYDGTVWAWGENGNGELGDGTTLSRS---TPAQVPGLSGVLAVAAGRNHSLVLRV 105

Query: 181 SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTC 240
            G V+  G NSS   G+  T   +  P  V  L GV      A  +F   L   G V   
Sbjct: 106 DGTVWAWGGNSSGQLGNGTTTSSLV-PLQVPGLGGVKAIAAVAYSSFA--LLSDGTVRAW 162

Query: 241 GSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 300
           G N  G LG G T DR TP    P+  +   V IAAG  +  AV  NG V  +G      
Sbjct: 163 GRNGFGVLGDGTTSDRYTP---VPVLNLSQAVSIAAGGDHAFAVLANGTVMGWGYNYFGQ 219

Query: 301 LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 360
           +G G       P  ++     G+  V V  G    VA  S G V++WG  + G LG G  
Sbjct: 220 VGDGTTISRTAPVPVKNL--TGVSAVSV-MGSNSSVARKSDGTVWSWGDNWVGQLGVGSA 276

Query: 361 IDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLR 420
           +  T P P+       AV + +       L+  G++ G+G+  +G LG    G +     
Sbjct: 277 V-STSPTPVQVPGITTAVAIQSGVGHGMALLADGTLKGWGYNLYGQLG---DGTTRTRYT 332

Query: 421 PRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF 477
           P ++  L    V  ++ G  H++ VT  G+++ +GDN +  LG  T    L P  + 
Sbjct: 333 PVLVPGL--AQVVHLAAGTLHSLAVTADGKVWAWGDNAQGTLGDGTTTQRLAPVTVV 387



 Score = 92.0 bits (227), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 90/311 (28%), Positives = 133/311 (42%), Gaps = 23/311 (7%)

Query: 170 ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
           A+++H   +   G V+  G+N +   G   T      P  V  L GV    V AG N + 
Sbjct: 45  AADDHTLALRYDGTVWAWGENGNGELGD-GTTLSRSTPAQVPGLSGVLA--VAAGRNHSL 101

Query: 230 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSVVQIAAGPSYMLAVTGN 287
            L + G V   G N+ GQLG+G T       S+ PL+   +G V  IAA      A+  +
Sbjct: 102 VLRVDGTVWAWGGNSSGQLGNGTTT-----SSLVPLQVPGLGGVKAIAAVAYSSFALLSD 156

Query: 288 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 347
           G V ++G      LG G   D   P  +    +     V ++AG +H  A+ ++G V  W
Sbjct: 157 GTVRAWGRNGFGVLGDGTTSDRYTPVPVLNLSQA----VSIAAGGDHAFAVLANGTVMGW 212

Query: 348 GKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG--WMGFG 405
           G  Y G +G G  I +T P P+ +L    AV V           D G+V+ +G  W+G  
Sbjct: 213 GYNYFGQVGDGTTISRTAPVPVKNLTGVSAVSVMGSNSSVARKSD-GTVWSWGDNWVGQL 271

Query: 406 SLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHD 465
            +G         V  P I  ++       I +G+ H + +   G L G+G N   QLG  
Sbjct: 272 GVGSAVSTSPTPVQVPGITTAV------AIQSGVGHGMALLADGTLKGWGYNLYGQLGDG 325

Query: 466 TLRGCLEPTEI 476
           T R    P  +
Sbjct: 326 TTRTRYTPVLV 336



 Score = 55.1 bits (131), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 55/207 (26%), Positives = 87/207 (42%), Gaps = 16/207 (7%)

Query: 114 MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           + I  G  H   +++N +V   G +  G +G G   ++       N  +    V V  S 
Sbjct: 191 VSIAAGGDHAFAVLANGTVMGWGYNYFGQVGDGTTISRTAPVPVKNL-TGVSAVSVMGSN 249

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGH----RDTNRPIFRPRLVEALKGVPCKQVTAGLNFT 228
           +  A     G V++ GDN     G       +  P+  P +  A+       + +G+   
Sbjct: 250 SSVAR-KSDGTVWSWGDNWVGQLGVGSAVSTSPTPVQVPGITTAVA------IQSGVGHG 302

Query: 229 GFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG 288
             L   G +   G N +GQLG G T  R TP  +  L +V   V +AAG  + LAVT +G
Sbjct: 303 MALLADGTLKGWGYNLYGQLGDGTTRTRYTPVLVPGLAQV---VHLAAGTLHSLAVTADG 359

Query: 289 VVYSFGSGSNFCLGHGEQHDELQPRAI 315
            V+++G  +   LG G     L P  +
Sbjct: 360 KVWAWGDNAQGTLGDGTTTQRLAPVTV 386



 Score = 43.9 bits (102), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 40/141 (28%), Positives = 57/141 (40%), Gaps = 5/141 (3%)

Query: 127 SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFT 186
           S+ +V+S G +  G LG G   +   S T +  P     V + +   H   +L  G +  
Sbjct: 256 SDGTVWSWGDNWVGQLGVGSAVS--TSPTPVQVPGITTAVAIQSGVGHGMALLADGTLKG 313

Query: 187 CGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHG 246
            G N     G   T R  + P LV  L  V    + AG   +  +T  G V   G N  G
Sbjct: 314 WGYNLYGQLGD-GTTRTRYTPVLVPGLAQV--VHLAAGTLHSLAVTADGKVWAWGDNAQG 370

Query: 247 QLGHGDTLDRPTPKSIAPLEE 267
            LG G T  R  P ++  L +
Sbjct: 371 TLGDGTTTQRLAPVTVVGLPQ 391


>gi|326674002|ref|XP_001334658.4| PREDICTED: RCC1 and BTB domain-containing protein 2 [Danio rerio]
          Length = 527

 Score =  112 bits (281), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 80/285 (28%), Positives = 133/285 (46%), Gaps = 5/285 (1%)

Query: 128 NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS-ASENHAAFVLQSGQVFT 186
           N  VF+ G++  G LG G +T   +   RI+      ++ +S  +  H       G+V+ 
Sbjct: 40  NDEVFALGTNCSGCLGLG-DTQSTIEPRRIDILCGKKIISLSYGTGPHVVIATADGEVYA 98

Query: 187 CGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHG 246
            G N     G+  TN  +    +   L G    +V+ G + T  LT  G V+  G N  G
Sbjct: 99  WGHNGYSQLGNGTTNHGLTPALVSTNLIGKRVTEVSCGSHHTIALTTDGEVYAWGYNNSG 158

Query: 247 QLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ 306
           Q+G G T ++PTP+ ++   +   VV IA G    +AV  NG  Y +G   N  LG G  
Sbjct: 159 QVGSGSTANQPTPRRVSSCLQNKVVVNIACGQLCSMAVLDNGETYGWGYNCNGQLGLGNN 218

Query: 307 HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP 366
            ++  P  I     +GI++++V+ G  H +AL   G+VY+WG    G LG G++ ++ +P
Sbjct: 219 GNQQTPCRIAAL--QGINIIQVACGYAHTLALTDEGFVYSWGANSYGQLGTGNKSNQAVP 276

Query: 367 EPLSSLKSHLA-VQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFP 410
             ++  K  +  V  C     +     +G V  +G     ++ +P
Sbjct: 277 TLINMDKERMVEVAACHTSHTSAAKTQSGQVLMWGQCRGQAVAYP 321



 Score =  104 bits (260), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 72/237 (30%), Positives = 118/237 (49%), Gaps = 9/237 (3%)

Query: 230 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGSVVQIAAGPSYMLAVTGN 287
           ++T+   V   G+N  G LG GDT     P+ I  L  +++ S+     GP  ++A T +
Sbjct: 36  YVTVNDEVFALGTNCSGCLGLGDTQSTIEPRRIDILCGKKIISL-SYGTGPHVVIA-TAD 93

Query: 288 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 347
           G VY++G      LG+G  +  L P  + T    G  V  VS G  H +AL + G VY W
Sbjct: 94  GEVYAWGHNGYSQLGNGTTNHGLTPALVST-NLIGKRVTEVSCGSHHTIALTTDGEVYAW 152

Query: 348 GKGYCGALGHGDEIDKTLPEPLSS-LKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGS 406
           G    G +G G   ++  P  +SS L++ + V +   +  +  ++D G  YG+G+   G 
Sbjct: 153 GYNNSGQVGSGSTANQPTPRRVSSCLQNKVVVNIACGQLCSMAVLDNGETYGWGYNCNGQ 212

Query: 407 LGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 463
           LG  + G      R   + +L+  ++ Q++ G  HT+ +TD G ++ +G N   QLG
Sbjct: 213 LGLGNNGNQQTPCR---IAALQGINIIQVACGYAHTLALTDEGFVYSWGANSYGQLG 266



 Score = 91.7 bits (226), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 70/243 (28%), Positives = 117/243 (48%), Gaps = 9/243 (3%)

Query: 170 ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
           ++ N A +V  + +VF  G N S C G  DT   I  PR ++ L G     ++ G   TG
Sbjct: 29  SAANEAIYVTVNDEVFALGTNCSGCLGLGDTQSTI-EPRRIDILCGKKIISLSYG---TG 84

Query: 230 ----FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 285
                 T  G V+  G N + QLG+G T    TP  ++       V +++ G  + +A+T
Sbjct: 85  PHVVIATADGEVYAWGHNGYSQLGNGTTNHGLTPALVSTNLIGKRVTEVSCGSHHTIALT 144

Query: 286 GNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVY 345
            +G VY++G  ++  +G G   ++  PR + +  +  + VV ++ G    +A+  +G  Y
Sbjct: 145 TDGEVYAWGYNNSGQVGSGSTANQPTPRRVSSCLQNKV-VVNIACGQLCSMAVLDNGETY 203

Query: 346 TWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFG 405
            WG    G LG G+  ++  P  +++L+    +QV      T  L D G VY +G   +G
Sbjct: 204 GWGYNCNGQLGLGNNGNQQTPCRIAALQGINIIQVACGYAHTLALTDEGFVYSWGANSYG 263

Query: 406 SLG 408
            LG
Sbjct: 264 QLG 266


>gi|390360684|ref|XP_003729747.1| PREDICTED: uncharacterized protein LOC100892600 [Strongylocentrotus
           purpuratus]
          Length = 946

 Score =  112 bits (281), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 88/290 (30%), Positives = 134/290 (46%), Gaps = 24/290 (8%)

Query: 203 PI-FRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKS 261
           PI F+  L   LK    +QV         +T    V++ G  + GQLGHGD   R  P S
Sbjct: 66  PIPFKIELPTILK---IRQVAVSRTHIALVTYERVVYSWGEGSKGQLGHGDLDPRNVPTS 122

Query: 262 IAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRK 321
           +  L+   S+ ++A G  + +  + NG+V + G GS  CLGHG+ H   +PR I+T    
Sbjct: 123 VEALK-GKSITRVACGAGFSVFGSDNGIVMTCGDGSTGCLGHGDYHSASRPRLIETLL-- 179

Query: 322 GIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLS-SLKSHLAVQ- 379
            + V  +S G EHVV +   G ++ WGKG  G LG GDE D    EP+  +L+  + +Q 
Sbjct: 180 SVDVTSISCGPEHVVGVGVDGEIFAWGKGKDGRLGLGDEED--FCEPMEVTLRDPVFIQE 237

Query: 380 VCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDR-----GVSDKVLR--------PRILDS 426
           V      T  L D G +   G   +  LG   R      + +   +        P  + +
Sbjct: 238 VKCGVDGTMFLTDMGCLLACGSNAYNKLGLNHRQGFLASMKNMFTKTEVEGRKVPTAVKA 297

Query: 427 LRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 476
           L    V  +  G +H+ VV + G ++ FG N+  QLG    +    P ++
Sbjct: 298 LSKFRVLDMVVGPHHSAVVVEPGLVYMFGKNQHGQLGFGNTKPREAPAQV 347



 Score = 93.2 bits (230), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 90/343 (26%), Positives = 151/343 (44%), Gaps = 24/343 (6%)

Query: 156 RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 215
           +I  P+   + QV+ S  H A V     V++ G+ S    GH D + P   P  VEALKG
Sbjct: 70  KIELPTILKIRQVAVSRTHIALVTYERVVYSWGEGSKGQLGHGDLD-PRNVPTSVEALKG 128

Query: 216 VPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA 275
               +V  G  F+ F +  G V TCG  + G LGHGD      P+ I  L  V  V  I+
Sbjct: 129 KSITRVACGAGFSVFGSDNGIVMTCGDGSTGCLGHGDYHSASRPRLIETLLSV-DVTSIS 187

Query: 276 AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHV 335
            GP +++ V  +G ++++G G +  LG G++ D  +P  ++   R  + +  V  G +  
Sbjct: 188 CGPEHVVGVGVDGEIFAWGKGKDGRLGLGDEEDFCEP--MEVTLRDPVFIQEVKCGVDGT 245

Query: 336 VALDSSGYVYTWGKGYCGALG---------------HGDEID-KTLPEPLSSLKSHLAVQ 379
           + L   G +   G      LG                  E++ + +P  + +L     + 
Sbjct: 246 MFLTDMGCLLACGSNAYNKLGLNHRQGFLASMKNMFTKTEVEGRKVPTAVKALSKFRVLD 305

Query: 380 VCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGL 439
           +      + V+V+ G VY FG    G LGF   G +     P  + ++    +S ++ G 
Sbjct: 306 MVVGPHHSAVVVEPGLVYMFGKNQHGQLGF---GNTKPREAPAQVQTMADKLISTVACGE 362

Query: 440 YHTVVVTDRGRLFGFGDNE-RAQLGHDTLRGCLEPTEIFIQEM 481
            +TV       L+ +G     +  G+D+ +  LE ++   QE+
Sbjct: 363 DYTVAGAMDNFLYLWGKGWLTSDPGNDSTQSSLELSQPKGQEV 405



 Score = 70.1 bits (170), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 68/252 (26%), Positives = 98/252 (38%), Gaps = 45/252 (17%)

Query: 128 NSSVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSASENHAAFVLQSGQVFT 186
           N  V +CG    G LGHG       S  R I    +  V  +S    H   V   G++F 
Sbjct: 147 NGIVMTCGDGSTGCLGHG--DYHSASRPRLIETLLSVDVTSISCGPEHVVGVGVDGEIFA 204

Query: 187 ----------CGDNSSFCCGHRDTNR-PIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRG 235
                      GD   FC     T R P+F             ++V  G++ T FLT  G
Sbjct: 205 WGKGKDGRLGLGDEEDFCEPMEVTLRDPVF------------IQEVKCGVDGTMFLTDMG 252

Query: 236 HVHTCGSNTHGQLG----------------HGDTLDRPTPKSIAPLEEVGSVVQIAAGPS 279
            +  CGSN + +LG                  +   R  P ++  L +   V+ +  GP 
Sbjct: 253 CLLACGSNAYNKLGLNHRQGFLASMKNMFTKTEVEGRKVPTAVKALSKF-RVLDMVVGPH 311

Query: 280 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 339
           +   V   G+VY FG   +  LG G       P  +QT   K I    V+ G+++ VA  
Sbjct: 312 HSAVVVEPGLVYMFGKNQHGQLGFGNTKPREAPAQVQTMADKLIST--VACGEDYTVAGA 369

Query: 340 SSGYVYTWGKGY 351
              ++Y WGKG+
Sbjct: 370 MDNFLYLWGKGW 381


>gi|302804446|ref|XP_002983975.1| hypothetical protein SELMODRAFT_119181 [Selaginella moellendorffii]
 gi|300148327|gb|EFJ14987.1| hypothetical protein SELMODRAFT_119181 [Selaginella moellendorffii]
          Length = 435

 Score =  112 bits (281), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 96/351 (27%), Positives = 156/351 (44%), Gaps = 26/351 (7%)

Query: 112 GNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSAS 171
           GN+ +T G +H++L +   VF  G    G LG   E  Q   +     P    V   SA 
Sbjct: 87  GNVGVTCGLFHSVLFAEQDVFVWGKGDGGRLGIDTEFNQYKPYVN---PRIKRVQMASAG 143

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
             H   + + G V+T G  +    GH    R +  PRL+E         V+AG + +  +
Sbjct: 144 GLHNIALTEVGNVYTWGYGAFGALGHGSYERELL-PRLLEGPWKDRIVHVSAGGSHSAAV 202

Query: 232 TIRGHVHTCGSNT-HGQLGHGD-------TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
           T  G ++T G +   G+LGHG+        L RPT   +  L+    +  +  G  + +A
Sbjct: 203 TESGELYTWGRDEGEGRLGHGNPDIMDEGALSRPT--KVQALDV--PIASVYCGGFFTMA 258

Query: 284 VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 343
           +T +G ++S+G  +N  LGHG + +  +P+ +     + + +V+V+ G  H  AL   G 
Sbjct: 259 LTKSGQLWSWGGNANHELGHGTRANNWKPKVVAAL--EDVTLVQVACGGFHAAALTQDGK 316

Query: 344 VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 403
           V TWG G  G LGHG   +   P  + ++       +      T  + + G +Y +G   
Sbjct: 317 VITWGYGGNGQLGHGTLENGKEPAIVEAMADKTCTYIACGPAWTAAITENGDLYTWGKNR 376

Query: 404 FGSLGFPDRGVSDKVLRPRILDSLRAHH------VSQISTGLYHTVVVTDR 448
              LG P  G+ D+ L P ++   +A H      V  +S G  H V +  R
Sbjct: 377 DYQLGIP--GLKDEQLDPVLVQFPQALHEKTPVEVLGVSCGANHGVCIVSR 425



 Score = 88.6 bits (218), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 80/271 (29%), Positives = 123/271 (45%), Gaps = 18/271 (6%)

Query: 221 VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 280
           VT GL F   L     V   G    G+LG     ++  P  + P   +  V   +AG  +
Sbjct: 91  VTCGL-FHSVLFAEQDVFVWGKGDGGRLGIDTEFNQYKP-YVNP--RIKRVQMASAGGLH 146

Query: 281 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 340
            +A+T  G VY++G G+   LGHG    EL PR ++   +    +V VSAG  H  A+  
Sbjct: 147 NIALTEVGNVYTWGYGAFGALGHGSYERELLPRLLEGPWKD--RIVHVSAGGSHSAAVTE 204

Query: 341 SGYVYTWGKGYC-GALGHG-----DEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 394
           SG +YTWG+    G LGHG     DE   + P  + +L   +A   C     T  L  +G
Sbjct: 205 SGELYTWGRDEGEGRLGHGNPDIMDEGALSRPTKVQALDVPIASVYCG-GFFTMALTKSG 263

Query: 395 SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 454
            ++ +G      LG    G      +P+++ +L    + Q++ G +H   +T  G++  +
Sbjct: 264 QLWSWGGNANHELG---HGTRANNWKPKVVAALEDVTLVQVACGGFHAAALTQDGKVITW 320

Query: 455 GDNERAQLGHDTLRGCLEPTEIFIQEMEEDT 485
           G     QLGH TL    EP    ++ M + T
Sbjct: 321 GYGGNGQLGHGTLENGKEPA--IVEAMADKT 349



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 100/383 (26%), Positives = 154/383 (40%), Gaps = 42/383 (10%)

Query: 131 VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCG-- 188
           V++ G    G +GHG E T+ +         AA            A         TCG  
Sbjct: 37  VWAWGRGTHGQVGHGSEDTEKLPVLISTLKLAAFTGMAPIQGRMPAKPRLGNVGVTCGLF 96

Query: 189 ------DNSSFCCGHRDTNR-----------PIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
                 +   F  G  D  R           P   PR+         +  +AG      L
Sbjct: 97  HSVLFAEQDVFVWGKGDGGRLGIDTEFNQYKPYVNPRIKR------VQMASAGGLHNIAL 150

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSI-APLEEVGSVVQIAAGPSYMLAVTGNGVV 290
           T  G+V+T G    G LGHG       P+ +  P ++   +V ++AG S+  AVT +G +
Sbjct: 151 TEVGNVYTWGYGAFGALGHGSYERELLPRLLEGPWKD--RIVHVSAGGSHSAAVTESGEL 208

Query: 291 YSFGSGSNFC-LGHGEQH--DE---LQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           Y++G       LGHG     DE    +P  +Q      + +  V  G    +AL  SG +
Sbjct: 209 YTWGRDEGEGRLGHGNPDIMDEGALSRPTKVQALD---VPIASVYCGGFFTMALTKSGQL 265

Query: 345 YTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGF 404
           ++WG      LGHG   +   P+ +++L+    VQV         L   G V  +G+ G 
Sbjct: 266 WSWGGNANHELGHGTRANNWKPKVVAALEDVTLVQVACGGFHAAALTQDGKVITWGYGGN 325

Query: 405 GSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 464
           G LG    G  +    P I++++     + I+ G   T  +T+ G L+ +G N   QLG 
Sbjct: 326 GQLG---HGTLENGKEPAIVEAMADKTCTYIACGPAWTAAITENGDLYTWGKNRDYQLGI 382

Query: 465 DTLRG-CLEPTEI-FIQEMEEDT 485
             L+   L+P  + F Q + E T
Sbjct: 383 PGLKDEQLDPVLVQFPQALHEKT 405



 Score = 40.0 bits (92), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 47/173 (27%), Positives = 71/173 (41%), Gaps = 30/173 (17%)

Query: 319 RRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK----- 373
           RR G    RVS+G+   +       V+ WG+G  G +GHG E  + LP  +S+LK     
Sbjct: 18  RRIGYLADRVSSGEPAELE------VWAWGRGTHGQVGHGSEDTEKLPVLISTLKLAAFT 71

Query: 374 --SHLAVQVCARKRKTFVLVDTG----------SVYGFGWMGFGSLGFPDRGVSDK-VLR 420
             + +  ++ A+ R   V V  G           V+ +G    G LG        K  + 
Sbjct: 72  GMAPIQGRMPAKPRLGNVGVTCGLFHSVLFAEQDVFVWGKGDGGRLGIDTEFNQYKPYVN 131

Query: 421 PRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEP 473
           PRI        V   S G  H + +T+ G ++ +G      LGH +    L P
Sbjct: 132 PRI------KRVQMASAGGLHNIALTEVGNVYTWGYGAFGALGHGSYERELLP 178


>gi|405950964|gb|EKC18916.1| RCC1 and BTB domain-containing protein 1 [Crassostrea gigas]
          Length = 531

 Score =  112 bits (281), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 75/250 (30%), Positives = 126/250 (50%), Gaps = 9/250 (3%)

Query: 230 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA--AGPSYMLAVTGN 287
           ++T    V+  GSN    LG GD      P+ +  L +   +V IA  +GP ++LAV+ N
Sbjct: 36  YITNDDEVYAIGSNCSSCLGLGDAHSSFEPRKVDVLCK-KKIVDIAFGSGP-HVLAVSKN 93

Query: 288 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 347
           G +YS+G      LG+G     L P  I T   +G  ++RV+ G  H +AL   G ++ W
Sbjct: 94  GEMYSWGHNGYCQLGNGGSGQGLTPTLINT-NLQGKKILRVACGSHHSMALSQEGEIFAW 152

Query: 348 GKGYCGALGHGDEIDKTLPEPLSS-LKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGS 406
           G+  CG +G G   ++  P  + + + + +A+ +   +  +  L++ G VYG+G+ G G 
Sbjct: 153 GQNNCGQVGSGSTTNQPTPRKVVAVIGNKMALSIACGQTSSMALLENGEVYGWGYNGNGQ 212

Query: 407 LGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDT 466
           LG    G +     P  +  L+   +SQ+  G  HT+ ++D G LF +G N   QLG   
Sbjct: 213 LGL---GNNVNQPNPCRVQQLQGVIISQLVCGYAHTLALSDEGSLFSWGANSYGQLGTGN 269

Query: 467 LRGCLEPTEI 476
               + P+++
Sbjct: 270 KANQVSPSKV 279



 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 67/289 (23%), Positives = 135/289 (46%), Gaps = 11/289 (3%)

Query: 117 TTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFT--RINFPSAAHVVQVS-ASEN 173
           ++G     + ++  V++ GS+    LG G   +   SF   +++      +V ++  S  
Sbjct: 29  SSGNEAIYITNDDEVYAIGSNCSSCLGLGDAHS---SFEPRKVDVLCKKKIVDIAFGSGP 85

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
           H   V ++G++++ G N     G+  + + +    +   L+G    +V  G + +  L+ 
Sbjct: 86  HVLAVSKNGEMYSWGHNGYCQLGNGGSGQGLTPTLINTNLQGKKILRVACGSHHSMALSQ 145

Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
            G +   G N  GQ+G G T ++PTP+ +  +      + IA G +  +A+  NG VY +
Sbjct: 146 EGEIFAWGQNNCGQVGSGSTTNQPTPRKVVAVIGNKMALSIACGQTSSMALLENGEVYGW 205

Query: 294 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 353
           G   N  LG G   ++  P  +Q  +  G+ + ++  G  H +AL   G +++WG    G
Sbjct: 206 GYNGNGQLGLGNNVNQPNPCRVQQLQ--GVIISQLVCGYAHTLALSDEGSLFSWGANSYG 263

Query: 354 ALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRK--TFVLVDTGSVYGFG 400
            LG G++ ++  P  +  +     V++ A      +  + +TG V+ +G
Sbjct: 264 QLGTGNKANQVSPSKV-PMNGERMVEIAASHYAHISAAMSETGKVFMWG 311


>gi|444915470|ref|ZP_21235602.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
 gi|444713401|gb|ELW54301.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
          Length = 852

 Score =  112 bits (280), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 99/324 (30%), Positives = 147/324 (45%), Gaps = 32/324 (9%)

Query: 168 VSASENHAAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVPCKQVTAGLN 226
           V+    H   +   G V+  G N     G    TNRP+  P  V  L G+  + V A  +
Sbjct: 145 VAVGTQHTLLLRPDGTVWAWGPNDYGQLGDGTTTNRPV--PVQVGGLSGI--RAVAASSD 200

Query: 227 FTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTG 286
            +  +   G V   G N+ GQLG G T DR TP  +A L    S+ ++AAG  Y LAV G
Sbjct: 201 HSLAVRDDGTVWAWGINSSGQLGDGTTNDRLTPVQVAGLS---SIKRVAAGDGYSLAVHG 257

Query: 287 NGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGI-HVVRVSA------GDEHVVALD 339
           +G V+++G  S+  LG G   D L P      R KG+  VV VSA      G  HV+A+ 
Sbjct: 258 DGTVWAWGINSSGQLGDGTTTDRLTPG-----RVKGLSEVVEVSAAKYSLLGSAHVLAVR 312

Query: 340 SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQV-------CARKRKTFVLVD 392
             G V+ WG    G LG G   D+  P  +S L    A+ V        +    +  +  
Sbjct: 313 GDGTVWAWGNNGSGQLGDGTTTDRLTPVQVSELDGVKAIAVGNSFPLSNSNGSYSLAVRG 372

Query: 393 TGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLF 452
            G+V+ +G    G LG    G +    RP  +++L    ++ +S    H + + D G ++
Sbjct: 373 DGTVWAWGSNSTGQLG---DGTTISRSRPAQVNALSG--ITAVSASSDHALAMRDDGTVW 427

Query: 453 GFGDNERAQLGHDTLRGCLEPTEI 476
            +G N   +LG +T    L P ++
Sbjct: 428 SWGKNTNGKLGDETTAHRLIPVQV 451



 Score = 91.3 bits (225), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 97/373 (26%), Positives = 166/373 (44%), Gaps = 35/373 (9%)

Query: 111 AGNMQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS 169
           +G   +  G  H++ +  +   ++ G    G+LG G      +SF  +         Q++
Sbjct: 455 SGVRSVAAGESHSVSVREDGKAWAWGYRGMGLLGDG---AMFLSFVPVQTMGLTATAQIA 511

Query: 170 ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNR-PIFRPRLVEALKGVPCKQVTAGLNFT 228
           +  N +  V +   ++  G +S    G   T   P+    L +       K V AG +++
Sbjct: 512 SHGNRSLAVKEDNTLWVWGSSSLGDLGDGSTGAHPVPSSILDD------VKAVAAGNDYS 565

Query: 229 GFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG 288
             +   G +   GSN+ GQLG G T +R TP  +  LE V   V  AA  S  LA+  +G
Sbjct: 566 LAVRNNGSLWAWGSNSIGQLGDGSTTNRLTPVPVNGLENV---VGAAASFSVSLALRSDG 622

Query: 289 VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 348
            V+++G  S   LG G   +   P  +       +H+V V+    H +AL + G V+ WG
Sbjct: 623 TVWAWGLNSVGQLGDGSTINRSTPGPVGGL----VHIVGVATSGGHSLALRNDGTVWAWG 678

Query: 349 KGYCGALGHGDEIDKTLPEP-----LSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 403
             + G LG G   ++  P+P     LS +K+  A  V +   +     D G+V+ +G   
Sbjct: 679 GNHDGQLGDGTTTNQ--PKPVQVSGLSGVKAVAAAIVSSAVVR-----DNGTVWAWGDNY 731

Query: 404 FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 463
            G LG    G +   L P ++  L    V  +++G +H + + + G ++ +GDN  +QLG
Sbjct: 732 SGQLG---DGTTTDRLTPVLVSGLSG--VKALASGNHHFLALRNDGTVWAWGDNYYSQLG 786

Query: 464 HDTLRGCLEPTEI 476
             T      P ++
Sbjct: 787 DGTRTQRSTPVQV 799



 Score = 89.0 bits (219), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 87/303 (28%), Positives = 138/303 (45%), Gaps = 31/303 (10%)

Query: 122 HTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
           H+L +  + +V++ G +  G LG G   T     T +     + + +V+A + ++  V  
Sbjct: 201 HSLAVRDDGTVWAWGINSSGQLGDG---TTNDRLTPVQVAGLSSIKRVAAGDGYSLAVHG 257

Query: 181 SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG----LNFTGFLTIRGH 236
            G V+  G NSS   G   T   +  P  V+ L  V   +V+A     L     L +RG 
Sbjct: 258 DGTVWAWGINSSGQLGDGTTTDRL-TPGRVKGLSEV--VEVSAAKYSLLGSAHVLAVRGD 314

Query: 237 --VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGP------SYMLAVTGNG 288
             V   G+N  GQLG G T DR TP  ++ L+ V ++    + P      SY LAV G+G
Sbjct: 315 GTVWAWGNNGSGQLGDGTTTDRLTPVQVSELDGVKAIAVGNSFPLSNSNGSYSLAVRGDG 374

Query: 289 VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 348
            V+++GS S   LG G      +P  +         +  VSA  +H +A+   G V++WG
Sbjct: 375 TVWAWGSNSTGQLGDGTTISRSRPAQVNALS----GITAVSASSDHALAMRDDGTVWSWG 430

Query: 349 KGYCGALGHGDEIDKTLP---EPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFG 405
           K   G LG      + +P     LS ++S     V A +  +  + + G  + +G+ G G
Sbjct: 431 KNTNGKLGDETTAHRLIPVQVHGLSGVRS-----VAAGESHSVSVREDGKAWAWGYRGMG 485

Query: 406 SLG 408
            LG
Sbjct: 486 LLG 488



 Score = 76.6 bits (187), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 75/246 (30%), Positives = 113/246 (45%), Gaps = 17/246 (6%)

Query: 125 LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQV 184
           L S+ +V++ G +  G LG G    +    T        H+V V+ S  H+  +   G V
Sbjct: 618 LRSDGTVWAWGLNSVGQLGDGSTINRS---TPGPVGGLVHIVGVATSGGHSLALRNDGTV 674

Query: 185 FTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 243
           +  G N     G    TN+P  +P  V  L GV  K V A +  +  +   G V   G N
Sbjct: 675 WAWGGNHDGQLGDGTTTNQP--KPVQVSGLSGV--KAVAAAIVSSAVVRDNGTVWAWGDN 730

Query: 244 THGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH 303
             GQLG G T DR TP  ++ L     V  +A+G  + LA+  +G V+++G      LG 
Sbjct: 731 YSGQLGDGTTTDRLTPVLVSGLS---GVKALASGNHHFLALRNDGTVWAWGDNYYSQLGD 787

Query: 304 GEQHDELQPRAIQTFRRKGIHVVR-VSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEID 362
           G +     P  +     +G+  V+ ++AG+ H +A+   G V+TWG    G LG+G    
Sbjct: 788 GTRTQRSTPVQV-----RGLSDVKLIAAGENHSMAVRKDGTVWTWGLNTSGQLGNGLLDF 842

Query: 363 KTLPEP 368
             LP P
Sbjct: 843 SALPVP 848



 Score = 75.5 bits (184), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 101/431 (23%), Positives = 176/431 (40%), Gaps = 71/431 (16%)

Query: 100 VEHSSDIVETSAGNMQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPET-----TQCVS 153
           V+  S++VE SA    +  G  H L +  + +V++ G++  G LG G  T      Q   
Sbjct: 286 VKGLSEVVEVSAAKYSL-LGSAHVLAVRGDGTVWAWGNNGSGQLGDGTTTDRLTPVQVSE 344

Query: 154 FTRINFPSAAHVVQVSASENHAAFVLQ-SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEA 212
              +   +  +   +S S    +  ++  G V+  G NS+   G   T     RP  V A
Sbjct: 345 LDGVKAIAVGNSFPLSNSNGSYSLAVRGDGTVWAWGSNSTGQLGD-GTTISRSRPAQVNA 403

Query: 213 LKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTP---------KSIA 263
           L G+    V+A  +    +   G V + G NT+G+LG   T  R  P         +S+A
Sbjct: 404 LSGITA--VSASSDHALAMRDDGTVWSWGKNTNGKLGDETTAHRLIPVQVHGLSGVRSVA 461

Query: 264 ------------------------------------PLEEVG--SVVQIAAGPSYMLAVT 285
                                               P++ +G  +  QIA+  +  LAV 
Sbjct: 462 AGESHSVSVREDGKAWAWGYRGMGLLGDGAMFLSFVPVQTMGLTATAQIASHGNRSLAVK 521

Query: 286 GNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVY 345
            +  ++ +GS S   LG G       P +I         V  V+AG+++ +A+ ++G ++
Sbjct: 522 EDNTLWVWGSSSLGDLGDGSTGAHPVPSSILD------DVKAVAAGNDYSLAVRNNGSLW 575

Query: 346 TWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFG 405
            WG    G LG G   ++  P P++ L++   V   A    +  L   G+V+ +G    G
Sbjct: 576 AWGSNSIGQLGDGSTTNRLTPVPVNGLEN--VVGAAASFSVSLALRSDGTVWAWGLNSVG 633

Query: 406 SLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHD 465
            LG    G +     P  +  L   H+  ++T   H++ + + G ++ +G N   QLG  
Sbjct: 634 QLG---DGSTINRSTPGPVGGLV--HIVGVATSGGHSLALRNDGTVWAWGGNHDGQLGDG 688

Query: 466 TLRGCLEPTEI 476
           T     +P ++
Sbjct: 689 TTTNQPKPVQV 699



 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 81/305 (26%), Positives = 127/305 (41%), Gaps = 23/305 (7%)

Query: 105 DIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAH 164
           D+   +AGN       Y   + +N S+++ GS+  G LG G  T +    T +      +
Sbjct: 554 DVKAVAAGN------DYSLAVRNNGSLWAWGSNSIGQLGDGSTTNR---LTPVPVNGLEN 604

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDT-NRPIFRPRLVEALKGVPCKQVTA 223
           VV  +AS + +  +   G V+  G NS    G   T NR    P  V  L  +     + 
Sbjct: 605 VVGAAASFSVSLALRSDGTVWAWGLNSVGQLGDGSTINRST--PGPVGGLVHIVGVATSG 662

Query: 224 GLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
           G +    L   G V   G N  GQLG G T ++P P  ++ L  V +V            
Sbjct: 663 GHSLA--LRNDGTVWAWGGNHDGQLGDGTTTNQPKPVQVSGLSGVKAVAAAIV---SSAV 717

Query: 284 VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 343
           V  NG V+++G   +  LG G   D L P  +         V  +++G+ H +AL + G 
Sbjct: 718 VRDNGTVWAWGDNYSGQLGDGTTTDRLTPVLVSGLS----GVKALASGNHHFLALRNDGT 773

Query: 344 VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 403
           V+ WG  Y   LG G    ++ P  +  L       + A +  +  +   G+V+ +G   
Sbjct: 774 VWAWGDNYYSQLGDGTRTQRSTPVQVRGLSD--VKLIAAGENHSMAVRKDGTVWTWGLNT 831

Query: 404 FGSLG 408
            G LG
Sbjct: 832 SGQLG 836


>gi|325181521|emb|CCA15971.1| conserved hypothetical protein [Albugo laibachii Nc14]
          Length = 6906

 Score =  112 bits (280), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 76/247 (30%), Positives = 123/247 (49%), Gaps = 8/247 (3%)

Query: 235 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 294
           G +++CG N++G+LG GD ++R    S+ PL     + Q+ +G   +  +T +GVV + G
Sbjct: 348 GELYSCGQNSYGELGLGDDIERHQLTSV-PLCGWDHIRQVVSGNEILAILTSDGVVLTCG 406

Query: 295 SGSNFCLGHGEQHDE--LQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 352
              +   GHG   DE  +  R IQ  R   +  +  S G EH++A+  +G  Y+WG    
Sbjct: 407 LNKSGQCGHG-NFDERVMLLRPIQALRSHRVKYINASNGCEHLIAITDTGLAYSWGYNDR 465

Query: 353 GALGHGDEIDKT-LPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 411
           G LGH +   K  LP+ + S+K             + ++  +G +Y FG    G LG   
Sbjct: 466 GQLGHENVGTKLYLPKLIESIKEKKMKSAAVSYHHSALVSVSGELYTFGMNDCGQLGLDH 525

Query: 412 RGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCL 471
              +     P+++ +L  HHVS +S GLYH V+ T  G +F  G N+  QLG    +   
Sbjct: 526 ---TQHQSTPQLVKALLGHHVSMVSCGLYHMVLCTISGEVFTCGKNDHGQLGLGHNKQVK 582

Query: 472 EPTEIFI 478
            PT++ +
Sbjct: 583 VPTQVVL 589



 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 104/354 (29%), Positives = 154/354 (43%), Gaps = 24/354 (6%)

Query: 125  LISNSSVFSCGSSLCG--VLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSG 182
            +     +FSCG +  G   LGH   T +     R +F S   +  ++        +++ G
Sbjct: 3129 MFEECEIFSCGQNNYGELCLGHCNPTNK---LERASFFSYKSIQSIAGGNEVLVVLMKDG 3185

Query: 183  QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR--GHVHTC 240
             VFTCG N S  CG  + +  +  P  + AL G+P   V A       L I   G V++ 
Sbjct: 3186 AVFTCGLNKSGQCGIGNFDERLIVPSPIPALSGIPITMVAASNGCEHMLAISHDGAVYSW 3245

Query: 241  GSNTHGQLGHGDTLDRP-TPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNF 299
            G N  GQLG G T+ +  TP+ I  L E   +   A    +   V+ NG + +FG   + 
Sbjct: 3246 GYNDRGQLGLGTTVSKSHTPRVIESLREKYFITFAAVSYHHSAVVSNNGDLLTFGMNDSG 3305

Query: 300  CLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG--H 357
             LG      +  P+ ++T   +   V RV+ G  H VA+   G VY++GK   G LG  H
Sbjct: 3306 QLGLDHTQHQHTPQLVETLSSQ--KVGRVACGLYHTVAIVDDGDVYSFGKNEYGQLGLSH 3363

Query: 358  GDEID-----KTLPEPLSSLKSHL--AVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFP 410
                      K  P P + +   +  AVQV      T  +++ G V  +G   +G LG  
Sbjct: 3364 TQNTKVPMLVKIPPAPRTPMLDAVNKAVQVYCGYYHTVTILECGKVVTWGRNDYGQLGIG 3423

Query: 411  DRG-VSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 463
             +   S     P  L S     V + S G YHT+++   GR   FG N + QLG
Sbjct: 3424 SKEHKSIAQFVPLPLTS----RVKRASCGCYHTLLLLVNGRPMVFGRNNKGQLG 3473



 Score =  102 bits (254), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 96/337 (28%), Positives = 149/337 (44%), Gaps = 11/337 (3%)

Query: 131 VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDN 190
           ++SCG +  G LG G +  +    T +      H+ QV +     A +   G V TCG N
Sbjct: 350 LYSCGQNSYGELGLGDDIERH-QLTSVPLCGWDHIRQVVSGNEILAILTSDGVVLTCGLN 408

Query: 191 SSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTA--GLNFTGFLTIRGHVHTCGSNTHGQL 248
            S  CGH + +  +   R ++AL+    K + A  G      +T  G  ++ G N  GQL
Sbjct: 409 KSGQCGHGNFDERVMLLRPIQALRSHRVKYINASNGCEHLIAITDTGLAYSWGYNDRGQL 468

Query: 249 GHGDTLDR-PTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH 307
           GH +   +   PK I  ++E   +   A    +   V+ +G +Y+FG      LG     
Sbjct: 469 GHENVGTKLYLPKLIESIKE-KKMKSAAVSYHHSALVSVSGELYTFGMNDCGQLGLDHTQ 527

Query: 308 DELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPE 367
            +  P+ ++     G HV  VS G  H+V    SG V+T GK   G LG G      +P 
Sbjct: 528 HQSTPQLVKALL--GHHVSMVSCGLYHMVLCTISGEVFTCGKNDHGQLGLGHNKQVKVPT 585

Query: 368 PLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSL 427
            +  L + L   V         +  TG  Y FG   +G LG   +   +  +   I  + 
Sbjct: 586 QV-VLPNELVCFVACGYYHATAITSTGLTYSFGRNDYGQLGIGSKIHQNIPIALTISSNT 644

Query: 428 RAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 464
           R  H    + G YHT++++D G++F FG N + QLG+
Sbjct: 645 RMVHA---ACGCYHTLLMSDSGQVFVFGRNNKGQLGN 678



 Score = 98.6 bits (244), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 89/340 (26%), Positives = 156/340 (45%), Gaps = 16/340 (4%)

Query: 124 LLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE--NHAAFVLQS 181
           +L S+  V +CG +  G  GHG    + +    I    +  V  ++AS    H   +  +
Sbjct: 395 ILTSDGVVLTCGLNKSGQCGHGNFDERVMLLRPIQALRSHRVKYINASNGCEHLIAITDT 454

Query: 182 GQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCG 241
           G  ++ G N     GH +    ++ P+L+E++K    K      + +  +++ G ++T G
Sbjct: 455 GLAYSWGYNDRGQLGHENVGTKLYLPKLIESIKEKKMKSAAVSYHHSALVSVSGELYTFG 514

Query: 242 SNTHGQLGHGDTLDRPTPKSIAPLEEVG-SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 300
            N  GQLG   T  + TP+ +  L  +G  V  ++ G  +M+  T +G V++ G   +  
Sbjct: 515 MNDCGQLGLDHTQHQSTPQLVKAL--LGHHVSMVSCGLYHMVLCTISGEVFTCGKNDHGQ 572

Query: 301 LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 360
           LG G  H++      Q      + V  V+ G  H  A+ S+G  Y++G+   G LG G +
Sbjct: 573 LGLG--HNKQVKVPTQVVLPNEL-VCFVACGYYHATAITSTGLTYSFGRNDYGQLGIGSK 629

Query: 361 IDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKV-- 418
           I + +P  L+   +   V        T ++ D+G V+ FG    G LG  +RG +D +  
Sbjct: 630 IHQNIPIALTISSNTRMVHAACGCYHTLLMSDSGQVFVFGRNNKGQLG--NRGNTDSLLP 687

Query: 419 --LRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGD 456
             L+ R   ++R      I+ G Y T ++ +R R    GD
Sbjct: 688 VPLKVRPEKNMR--RCLHIAAGFYTTSLIVERKRENDEGD 725



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 99/379 (26%), Positives = 161/379 (42%), Gaps = 24/379 (6%)

Query: 124  LLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE--NHAAFVLQS 181
            +L+ + +VF+CG +  G  G G    + +  + I   S   +  V+AS    H   +   
Sbjct: 3180 VLMKDGAVFTCGLNKSGQCGIGNFDERLIVPSPIPALSGIPITMVAASNGCEHMLAISHD 3239

Query: 182  GQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTA-GLNFTGFLTIRGHVHTC 240
            G V++ G N     G   T      PR++E+L+        A   + +  ++  G + T 
Sbjct: 3240 GAVYSWGYNDRGQLGLGTTVSKSHTPRVIESLREKYFITFAAVSYHHSAVVSNNGDLLTF 3299

Query: 241  GSNTHGQLGHGDTLDRPTPKSIAPL--EEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
            G N  GQLG   T  + TP+ +  L  ++VG   ++A G  + +A+  +G VYSFG    
Sbjct: 3300 GMNDSGQLGLDHTQHQHTPQLVETLSSQKVG---RVACGLYHTVAIVDDGDVYSFGKNEY 3356

Query: 299  FCLGHGEQHDELQPRAIQ------TFRRKGIH-VVRVSAGDEHVVALDSSGYVYTWGKGY 351
              LG     +   P  ++      T     ++  V+V  G  H V +   G V TWG+  
Sbjct: 3357 GQLGLSHTQNTKVPMLVKIPPAPRTPMLDAVNKAVQVYCGYYHTVTILECGKVVTWGRND 3416

Query: 352  CGALGHGDEIDKTLPE--PLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGF 409
             G LG G +  K++ +  PL  L S +    C       +LV+ G    FG    G LG 
Sbjct: 3417 YGQLGIGSKEHKSIAQFVPL-PLTSRVKRASCGCYHTLLLLVN-GRPMVFGRNNKGQLGV 3474

Query: 410  PDRGV-SDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDR---GRLFGFGDNERAQLGHD 465
              R + S  +  P  L  L +  V  IS G Y + ++T +    +L   G N       +
Sbjct: 3475 ASRSLPSADLPLPIPLHPLSSDEVVYISAGFYCSYILTGKEANDQLQAMGGNPTENPAEE 3534

Query: 466  -TLRGCLEPTEIFIQEMEE 483
             T R C    ++F   M++
Sbjct: 3535 MTSRTCRTSEKLFQDLMKQ 3553



 Score = 63.2 bits (152), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 58/216 (26%), Positives = 101/216 (46%), Gaps = 18/216 (8%)

Query: 257  PTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS--NFCLGHGEQHDELQPRA 314
            P   SI+ LE+ G   Q ++  S M        ++S G  +    CLGH    ++L+  +
Sbjct: 3106 PNNTSIS-LEQKGKDCQWSSTSSPMFE---ECEIFSCGQNNYGELCLGHCNPTNKLERAS 3161

Query: 315  IQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTL-PEPLSSLK 373
              +++     +  ++ G+E +V L   G V+T G    G  G G+  ++ + P P+ +L 
Sbjct: 3162 FFSYKS----IQSIAGGNEVLVVLMKDGAVFTCGLNKSGQCGIGNFDERLIVPSPIPALS 3217

Query: 374  SHLAVQVCARK--RKTFVLVDTGSVYGFGWMGFGSLGFPDRGVS-DKVLRPRILDSLRAH 430
                  V A         +   G+VY +G+   G LG    G +  K   PR+++SLR  
Sbjct: 3218 GIPITMVAASNGCEHMLAISHDGAVYSWGYNDRGQLGL---GTTVSKSHTPRVIESLREK 3274

Query: 431  H-VSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHD 465
            + ++  +   +H+ VV++ G L  FG N+  QLG D
Sbjct: 3275 YFITFAAVSYHHSAVVSNNGDLLTFGMNDSGQLGLD 3310


>gi|309792077|ref|ZP_07686551.1| regulator of chromosome condensation RCC1 [Oscillochloris
           trichoides DG-6]
 gi|308225884|gb|EFO79638.1| regulator of chromosome condensation RCC1 [Oscillochloris
           trichoides DG6]
          Length = 778

 Score =  112 bits (280), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 116/389 (29%), Positives = 162/389 (41%), Gaps = 19/389 (4%)

Query: 89  NWKRVLRFLQSVEHSS--DIVETSAGNMQITTGRYHTLLISNSSVFSC-GSSLCGVLGHG 145
           NW   L    + E S+  D+V  S+G   I  G  HT  I+     SC G +    LG G
Sbjct: 287 NWSGQLGDGTTDERSTPVDVVGLSSGVTAIAAGNDHTCAITTGGGVSCWGVNQYSQLGDG 346

Query: 146 PETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIF 205
             T Q          S A    ++A + H   +   G V   G N S   G   T +   
Sbjct: 347 TTTQQSTPVVVNGLSSRA--AAIAAGDGHTCAMTTGGGVSCWGRNWSGQLGDGTTTQR-R 403

Query: 206 RPRLVEALK-GVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP 264
            P  VE L  GV    +TAG + T  L+  G V   G+N  GQLG G T+ R TP  +  
Sbjct: 404 TPMQVEGLSSGV--ADITAGDSHTCALSTEGGVTCWGNNESGQLGDGTTIQRSTPVQVEG 461

Query: 265 LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH 324
           L     VV I AG S+  A++  G V  +G   +  LG+G       P  ++        
Sbjct: 462 LSS--GVVAITAGDSHTCALSTEGGVTCWGGNGSGQLGNGTTTQRSTPVQVEGLSSG--- 516

Query: 325 VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARK 384
           V+ ++AGD H  AL + G V  WG  + G LG G    + +P  +  L S +A  + A  
Sbjct: 517 VMAITAGDSHTCALTTGGGVTCWGGNWYGQLGDGTTTQRNMPVNVVGLSSGVAA-IAAGG 575

Query: 385 RKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV 444
             T  L   G V  +GW  +  LG   R   +  ++   L S     V+ I+ G  HT  
Sbjct: 576 SHTCALSTEGGVTCWGWNTYDQLGDGTRTNHNTPVQVEGLSS----GVAAIAAGYAHTCA 631

Query: 445 VTDRGRLFGFGDNERAQLGHDTLRGCLEP 473
           +   G +  +G N   QLG  T    + P
Sbjct: 632 LITSGEVTCWGWNWYGQLGDGTTTQRMTP 660



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 107/349 (30%), Positives = 151/349 (43%), Gaps = 20/349 (5%)

Query: 121 YHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
           Y   L +NS+V   G++  G LG G  T Q  +   +N  S+  VV ++A   H   +  
Sbjct: 67  YTCALTTNSAVICWGNNEFGQLGDG-TTIQRNTPVAVNGLSSG-VVAIAAGYAHTCALTT 124

Query: 181 SGQVFTCGDNSSFCCGHRDTNRPIFR--PRLVEAL-KGVPCKQVTAGLNFTGFLTIRGHV 237
           SG V   G+N S   G       I R  P  V  L  GV    + AG   T  LT  G V
Sbjct: 125 SGGVSCWGNNES---GQLGNGITIQRRTPVQVAGLSSGV--AAIAAGEYHTCALTTDGAV 179

Query: 238 HTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 297
              GSN +GQLG G T  R TP  +A L     V  I AG S+  A+T  G V  +G   
Sbjct: 180 TCWGSNGYGQLGDGTTTQRSTPVQVAGLSS--GVTAITAGGSHTCALTTGGAVTCWGRNG 237

Query: 298 NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 357
           N  LG G       P  +     +   V  ++AGD +  AL + G V  WG  + G LG 
Sbjct: 238 NGQLGDGTTTQRSTPVNVLGLSSE---VAAITAGDVYTCALTTGGGVTCWGANWSGQLGD 294

Query: 358 GDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDK 417
           G   +++ P  +  L S +   + A    T  +   G V  +G   +  LG    G + +
Sbjct: 295 GTTDERSTPVDVVGLSSGV-TAIAAGNDHTCAITTGGGVSCWGVNQYSQLG---DGTTTQ 350

Query: 418 VLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDT 466
              P +++ L +   + I+ G  HT  +T  G +  +G N   QLG  T
Sbjct: 351 QSTPVVVNGLSS-RAAAIAAGDGHTCAMTTGGGVSCWGRNWSGQLGDGT 398



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 104/369 (28%), Positives = 152/369 (41%), Gaps = 17/369 (4%)

Query: 110 SAGNMQITTGRYHTLLISNSSVFSC-GSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQV 168
           S+G   I  G YHT  ++     +C GS+  G LG G  T +          S   V  +
Sbjct: 157 SSGVAAIAAGEYHTCALTTDGAVTCWGSNGYGQLGDGTTTQRSTPVQVAGLSSG--VTAI 214

Query: 169 SASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALK-GVPCKQVTAGLNF 227
           +A  +H   +   G V   G N +   G   T +   R   V  L        +TAG  +
Sbjct: 215 TAGGSHTCALTTGGAVTCWGRNGNGQLGDGTTTQ---RSTPVNVLGLSSEVAAITAGDVY 271

Query: 228 TGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN 287
           T  LT  G V   G+N  GQLG G T +R TP  +  L     V  IAAG  +  A+T  
Sbjct: 272 TCALTTGGGVTCWGANWSGQLGDGTTDERSTPVDVVGLSS--GVTAIAAGNDHTCAITTG 329

Query: 288 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 347
           G V  +G      LG G    +  P  +     +      ++AGD H  A+ + G V  W
Sbjct: 330 GGVSCWGVNQYSQLGDGTTTQQSTPVVVNGLSSR---AAAIAAGDGHTCAMTTGGGVSCW 386

Query: 348 GKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSL 407
           G+ + G LG G    +  P  +  L S +A  + A    T  L   G V  +G    G L
Sbjct: 387 GRNWSGQLGDGTTTQRRTPMQVEGLSSGVA-DITAGDSHTCALSTEGGVTCWGNNESGQL 445

Query: 408 GFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTL 467
           G    G + +   P  ++ L +  V+ I+ G  HT  ++  G +  +G N   QLG+ T 
Sbjct: 446 G---DGTTIQRSTPVQVEGLSSGVVA-ITAGDSHTCALSTEGGVTCWGGNGSGQLGNGTT 501

Query: 468 RGCLEPTEI 476
                P ++
Sbjct: 502 TQRSTPVQV 510



 Score = 98.6 bits (244), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 111/371 (29%), Positives = 166/371 (44%), Gaps = 17/371 (4%)

Query: 110 SAGNMQITTGRYHTLLISNSSVFSC-GSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQV 168
           S+G   IT G  HT  +S     +C G++  G LG G  T Q  +  ++   S+  VV +
Sbjct: 412 SSGVADITAGDSHTCALSTEGGVTCWGNNESGQLGDG-TTIQRSTPVQVEGLSSG-VVAI 469

Query: 169 SASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALK-GVPCKQVTAGLNF 227
           +A ++H   +   G V   G N S   G+  T +    P  VE L  GV    +TAG + 
Sbjct: 470 TAGDSHTCALSTEGGVTCWGGNGSGQLGNGTTTQR-STPVQVEGLSSGV--MAITAGDSH 526

Query: 228 TGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN 287
           T  LT  G V   G N +GQLG G T  R  P ++  L     V  IAAG S+  A++  
Sbjct: 527 TCALTTGGGVTCWGGNWYGQLGDGTTTQRNMPVNVVGLSS--GVAAIAAGGSHTCALSTE 584

Query: 288 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 347
           G V  +G  +   LG G + +   P  ++        V  ++AG  H  AL +SG V  W
Sbjct: 585 GGVTCWGWNTYDQLGDGTRTNHNTPVQVEGLSSG---VAAIAAGYAHTCALITSGEVTCW 641

Query: 348 GKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSL 407
           G  + G LG G    +  P  ++ L S +A  V A    T  L   G V  +GW  +  L
Sbjct: 642 GWNWYGQLGDGTTTQRMTPVVVNGLSSEVAAIV-AGYAHTCALSTGGGVTCWGWNKYYQL 700

Query: 408 GFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTL 467
           G    G   +   P  +D L +  V+ ++ G  HT  ++  G +  +G +   QLG  T+
Sbjct: 701 G---NGTISQRSIPMDVDGLSS-GVAALAAGDAHTCGLSTGGGVTCWGWDVYGQLGVGTI 756

Query: 468 RGCLEPTEIFI 478
                P ++ +
Sbjct: 757 AYRTTPVDVTV 767



 Score = 95.5 bits (236), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 101/358 (28%), Positives = 151/358 (42%), Gaps = 15/358 (4%)

Query: 110 SAGNMQITTGRYHTLLISNSSVFSC-GSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQV 168
           S+G + I  G  HT  ++ S   SC G++  G LG+G    +          S   V  +
Sbjct: 106 SSGVVAIAAGYAHTCALTTSGGVSCWGNNESGQLGNGITIQRRTPVQVAGLSSG--VAAI 163

Query: 169 SASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFT 228
           +A E H   +   G V   G N     G   T +     ++     GV    +TAG + T
Sbjct: 164 AAGEYHTCALTTDGAVTCWGSNGYGQLGDGTTTQRSTPVQVAGLSSGV--TAITAGGSHT 221

Query: 229 GFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG 288
             LT  G V   G N +GQLG G T  R TP ++  L     V  I AG  Y  A+T  G
Sbjct: 222 CALTTGGAVTCWGRNGNGQLGDGTTTQRSTPVNVLGLSS--EVAAITAGDVYTCALTTGG 279

Query: 289 VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 348
            V  +G+  +  LG G   +   P  +         V  ++AG++H  A+ + G V  WG
Sbjct: 280 GVTCWGANWSGQLGDGTTDERSTPVDVVGLSSG---VTAIAAGNDHTCAITTGGGVSCWG 336

Query: 349 KGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLG 408
                 LG G    ++ P  ++ L S  A  + A    T  +   G V  +G    G LG
Sbjct: 337 VNQYSQLGDGTTTQQSTPVVVNGLSSR-AAAIAAGDGHTCAMTTGGGVSCWGRNWSGQLG 395

Query: 409 FPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDT 466
               G + +   P  ++ L +  V+ I+ G  HT  ++  G +  +G+NE  QLG  T
Sbjct: 396 ---DGTTTQRRTPMQVEGLSS-GVADITAGDSHTCALSTEGGVTCWGNNESGQLGDGT 449



 Score = 95.1 bits (235), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 102/358 (28%), Positives = 146/358 (40%), Gaps = 15/358 (4%)

Query: 110 SAGNMQITTGRYHTLLISNSSVFSC-GSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQV 168
           S+G   IT G  HT  ++     +C G +  G LG G  T +      +   S   V  +
Sbjct: 208 SSGVTAITAGGSHTCALTTGGAVTCWGRNGNGQLGDGTTTQRSTPVNVLGLSS--EVAAI 265

Query: 169 SASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFT 228
           +A + +   +   G V   G N S   G   T+       +V    GV    + AG + T
Sbjct: 266 TAGDVYTCALTTGGGVTCWGANWSGQLGDGTTDERSTPVDVVGLSSGV--TAIAAGNDHT 323

Query: 229 GFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG 288
             +T  G V   G N + QLG G T  + TP  +  L        IAAG  +  A+T  G
Sbjct: 324 CAITTGGGVSCWGVNQYSQLGDGTTTQQSTPVVVNGLSS--RAAAIAAGDGHTCAMTTGG 381

Query: 289 VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 348
            V  +G   +  LG G       P  ++        V  ++AGD H  AL + G V  WG
Sbjct: 382 GVSCWGRNWSGQLGDGTTTQRRTPMQVEGLSSG---VADITAGDSHTCALSTEGGVTCWG 438

Query: 349 KGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLG 408
               G LG G  I ++ P  +  L S + V + A    T  L   G V  +G  G G LG
Sbjct: 439 NNESGQLGDGTTIQRSTPVQVEGLSSGV-VAITAGDSHTCALSTEGGVTCWGGNGSGQLG 497

Query: 409 FPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDT 466
               G + +   P  ++ L +  V  I+ G  HT  +T  G +  +G N   QLG  T
Sbjct: 498 ---NGTTTQRSTPVQVEGLSS-GVMAITAGDSHTCALTTGGGVTCWGGNWYGQLGDGT 551



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 97/323 (30%), Positives = 138/323 (42%), Gaps = 23/323 (7%)

Query: 155 TRINFPSAAHVVQVSASENHAAFVLQSGQVFTCG--DNSSFCC------GHRDTNRPIFR 206
           T +N+   A V++ + +       + +G  +TC    NS+  C      G       I R
Sbjct: 37  TNLNYELPATVLEANIASAQHRTPIAAGDAYTCALTTNSAVICWGNNEFGQLGDGTTIQR 96

Query: 207 --PRLVEALK-GVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 263
             P  V  L  GV    + AG   T  LT  G V   G+N  GQLG+G T+ R TP  +A
Sbjct: 97  NTPVAVNGLSSGV--VAIAAGYAHTCALTTSGGVSCWGNNESGQLGNGITIQRRTPVQVA 154

Query: 264 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGI 323
            L     V  IAAG  +  A+T +G V  +GS     LG G       P  +        
Sbjct: 155 GLSS--GVAAIAAGEYHTCALTTDGAVTCWGSNGYGQLGDGTTTQRSTPVQVAGLSSG-- 210

Query: 324 HVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCAR 383
            V  ++AG  H  AL + G V  WG+   G LG G    ++ P  +  L S +A  + A 
Sbjct: 211 -VTAITAGGSHTCALTTGGAVTCWGRNGNGQLGDGTTTQRSTPVNVLGLSSEVAA-ITAG 268

Query: 384 KRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV 443
              T  L   G V  +G    G LG    G +D+   P  +  L +  V+ I+ G  HT 
Sbjct: 269 DVYTCALTTGGGVTCWGANWSGQLG---DGTTDERSTPVDVVGLSS-GVTAIAAGNDHTC 324

Query: 444 VVTDRGRLFGFGDNERAQLGHDT 466
            +T  G +  +G N+ +QLG  T
Sbjct: 325 AITTGGGVSCWGVNQYSQLGDGT 347



 Score = 69.7 bits (169), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 81/272 (29%), Positives = 112/272 (41%), Gaps = 14/272 (5%)

Query: 110 SAGNMQITTGRYHTLLISNSSVFSC-GSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQV 168
           S+G M IT G  HT  ++     +C G +  G LG G  T + +    +   S   V  +
Sbjct: 514 SSGVMAITAGDSHTCALTTGGGVTCWGGNWYGQLGDGTTTQRNMPVNVVGLSSG--VAAI 571

Query: 169 SASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFR-PRLVEALK-GVPCKQVTAGLN 226
           +A  +H   +   G V   G N+    G  D  R     P  VE L  GV    + AG  
Sbjct: 572 AAGGSHTCALSTEGGVTCWGWNTYDQLG--DGTRTNHNTPVQVEGLSSGV--AAIAAGYA 627

Query: 227 FTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTG 286
            T  L   G V   G N +GQLG G T  R TP  +  L     V  I AG ++  A++ 
Sbjct: 628 HTCALITSGEVTCWGWNWYGQLGDGTTTQRMTPVVVNGLSS--EVAAIVAGYAHTCALST 685

Query: 287 NGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYT 346
            G V  +G    + LG+G       P  +         V  ++AGD H   L + G V  
Sbjct: 686 GGGVTCWGWNKYYQLGNGTISQRSIPMDVDGLSSG---VAALAAGDAHTCGLSTGGGVTC 742

Query: 347 WGKGYCGALGHGDEIDKTLPEPLSSLKSHLAV 378
           WG    G LG G    +T P  ++ L  +L V
Sbjct: 743 WGWDVYGQLGVGTIAYRTTPVDVTVLFVYLPV 774



 Score = 56.2 bits (134), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 47/168 (27%), Positives = 73/168 (43%), Gaps = 5/168 (2%)

Query: 309 ELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEP 368
           EL    ++       H   ++AGD +  AL ++  V  WG    G LG G  I +  P  
Sbjct: 42  ELPATVLEANIASAQHRTPIAAGDAYTCALTTNSAVICWGNNEFGQLGDGTTIQRNTPVA 101

Query: 369 LSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLR 428
           ++ L S + V + A    T  L  +G V  +G    G LG    G++ +   P  +  L 
Sbjct: 102 VNGLSSGV-VAIAAGYAHTCALTTSGGVSCWGNNESGQLG---NGITIQRRTPVQVAGLS 157

Query: 429 AHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 476
           +  V+ I+ G YHT  +T  G +  +G N   QLG  T      P ++
Sbjct: 158 SG-VAAIAAGEYHTCALTTDGAVTCWGSNGYGQLGDGTTTQRSTPVQV 204


>gi|119626424|gb|EAX06019.1| hect domain and RLD 6, isoform CRA_b [Homo sapiens]
          Length = 1028

 Score =  112 bits (280), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 83/252 (32%), Positives = 121/252 (48%), Gaps = 5/252 (1%)

Query: 215 GVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQI 274
           G    Q  +G   +  L     V +CG N+ GQLG         P+ I  LE +  V  +
Sbjct: 22  GAELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGELPEPIQALETL-IVDLV 80

Query: 275 AAGPSYMLAVTGNGVVYSFGSGSNFCLGHGE-QHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           + G  + LAV   G V+++G+GS   LG GE +     P+ I T     I +++VS G  
Sbjct: 81  SCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKIMTL--NDIKIIQVSCGHY 138

Query: 334 HVVALDSSGYVYTWGKGYCGALGHGDEI-DKTLPEPLSSLKSHLAVQVCARKRKTFVLVD 392
           H +AL     V++WGK   G LG G E   +  P+ + SL+     QV A    +F L  
Sbjct: 139 HSLALSKDSQVFSWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSL 198

Query: 393 TGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLF 452
            G+ +G+G    G L    R V  +  +P  + +L+   V  IS G  HT V+T  G++F
Sbjct: 199 CGTSFGWGSNSAGQLALSGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGKVF 258

Query: 453 GFGDNERAQLGH 464
            FGDN   QLG+
Sbjct: 259 TFGDNRSGQLGY 270



 Score =  102 bits (253), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 89/302 (29%), Positives = 148/302 (49%), Gaps = 20/302 (6%)

Query: 163 AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 222
           A ++Q ++ E H+  +L + +V +CGDNS    G R   R    P  ++AL+ +    V+
Sbjct: 23  AELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGEL-PEPIQALETLIVDLVS 81

Query: 223 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRP-TPKSIAPLEEVGSVVQIAAGPSYM 281
            G   +  +  +G V   G+ + GQLG G+  +   TPK I  L ++  ++Q++ G  + 
Sbjct: 82  CGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKIMTLNDI-KIIQVSCGHYHS 140

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQH-DELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 340
           LA++ +  V+S+G  S+  LG G++   +  P+ +++   +GI + +V+AG  H  AL  
Sbjct: 141 LALSKDSQVFSWGKNSHGQLGLGKEFPSQASPQRVRSL--EGIPLAQVAAGGAHSFALSL 198

Query: 341 SGYVYTWGKGYCGAL---GHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVY 397
            G  + WG    G L   G    +    P  + +LK+   V +      T VL   G V+
Sbjct: 199 CGTSFGWGSNSAGQLALSGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGKVF 258

Query: 398 GFGWMGFGSLGF---PDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV-VTDRGRLFG 453
            FG    G LG+   P++     V R   +D L    VSQI  G YHT+  V   G++  
Sbjct: 259 TFGDNRSGQLGYSPTPEKRGPQLVER---IDGL----VSQIDCGSYHTLAYVHTTGQVVS 311

Query: 454 FG 455
           FG
Sbjct: 312 FG 313



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 79/297 (26%), Positives = 130/297 (43%), Gaps = 19/297 (6%)

Query: 114 MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHV 165
           +Q  +G  H+LL+ +N  V SCG +  G LG         PE  Q +    ++       
Sbjct: 26  LQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGELPEPIQALETLIVDL------ 79

Query: 166 VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 225
             VS  + H+  V   G+VF  G  S    G  +     F P+ +  L  +   QV+ G 
Sbjct: 80  --VSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKIMTLNDIKIIQVSCGH 137

Query: 226 NFTGFLTIRGHVHTCGSNTHGQLGHGDTL-DRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 284
             +  L+    V + G N+HGQLG G     + +P+ +  LE +  + Q+AAG ++  A+
Sbjct: 138 YHSLALSKDSQVFSWGKNSHGQLGLGKEFPSQASPQRVRSLEGI-PLAQVAAGGAHSFAL 196

Query: 285 TGNGVVYSFGSGSNFCLGHGEQHDELQP-RAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 343
           +  G  + +GS S   L    ++  +Q  + +     K + VV +S GD H   L   G 
Sbjct: 197 SLCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGK 256

Query: 344 VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 400
           V+T+G    G LG+    +K  P+ +  +   ++   C        +  TG V  FG
Sbjct: 257 VFTFGDNRSGQLGYSPTPEKRGPQLVERIDGLVSQIDCGSYHTLAYVHTTGQVVSFG 313


>gi|47212900|emb|CAF90790.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 2131

 Score =  112 bits (280), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 101/375 (26%), Positives = 166/375 (44%), Gaps = 48/375 (12%)

Query: 115  QITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQV---SA 170
            Q+  G+  T +I  N +V +CG    G LG G  +      T I+      V Q+     
Sbjct: 1156 QVVCGQNCTFVIQPNGTVLACGEGSYGRLGQG-NSDDLHVLTVISALQGFVVTQLVTSCG 1214

Query: 171  SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG--------------- 215
            S+ H+  + +SG+VF+ GD      GH +++R   RPR +EAL+G               
Sbjct: 1215 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQVGRGRAAGAG 1273

Query: 216  -VPCK-------QVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE- 266
               C+       Q++ G   +  +T  G + T G+  +G+LG G+T ++  P+ +A LE 
Sbjct: 1274 LCRCRSHLHLRLQMSCGFKHSAVVTADGKLFTFGNGDYGRLGLGNTSNKKLPERVAALEG 1333

Query: 267  -EVGSVVQIAAGPSYMLAVTGNGV-VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRK--- 321
             ++G V  +A G ++ L V+ +G+ V++FG G    LG G    +  P+      +    
Sbjct: 1334 YQIGQVANVACGLNHTLVVSADGMMVWAFGDGDYGKLGLGNSTAKSSPQVWAVILQSPTL 1393

Query: 322  ----------GIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSS 371
                      GI + +V+ G +  VAL   G V+T+G+     L      +   P+ L +
Sbjct: 1394 CQELKVDVLCGISIKKVACGTQFSVALTKDGRVFTFGQDRLIGLPESRARNHNRPQQLPA 1453

Query: 372  LKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHH 431
            L       V      T  L  TG VY +G    G LG    G ++ V  P ++  L+  H
Sbjct: 1454 LSGVHVQDVAVGAEHTLALSSTGDVYAWGSNSEGQLGL---GHTNHVREPTVVTMLQGKH 1510

Query: 432  VSQISTGLYHTVVVT 446
            + Q+S G  H+   T
Sbjct: 1511 IHQVSAGRCHSAAWT 1525



 Score = 85.1 bits (209), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 91/361 (25%), Positives = 151/361 (41%), Gaps = 46/361 (12%)

Query: 160  PSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCK 219
            PS +   QV   +N    +  +G V  CG+ S    G  +++  +    ++ AL+G    
Sbjct: 1149 PSFSQAQQVVCGQNCTFVIQPNGTVLACGEGSYGRLGQGNSDD-LHVLTVISALQGFVVT 1207

Query: 220  QVTAGLNFTGF---LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGSV--- 271
            Q+       G    LT  G V + G   +G+LGHG++  +  P+ I  L  EEV  V   
Sbjct: 1208 QLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQVGRG 1267

Query: 272  -----------------VQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRA 314
                             +Q++ G  +   VT +G +++FG+G    LG G   ++  P  
Sbjct: 1268 RAAGAGLCRCRSHLHLRLQMSCGFKHSAVVTADGKLFTFGNGDYGRLGLGNTSNKKLPER 1327

Query: 315  IQTFRRKGI-HVVRVSAGDEHVVALDSSGY-VYTWGKGYCGALGHGDEIDKTLPEPLS-- 370
            +       I  V  V+ G  H + + + G  V+ +G G  G LG G+   K+ P+  +  
Sbjct: 1328 VAALEGYQIGQVANVACGLNHTLVVSADGMMVWAFGDGDYGKLGLGNSTAKSSPQVWAVI 1387

Query: 371  ----SLKSHLAVQV-CARKRK--------TFVLVDTGSVYGFGWMGFGSLGFPDRGVSDK 417
                +L   L V V C    K        +  L   G V+ FG      +G P+    + 
Sbjct: 1388 LQSPTLCQELKVDVLCGISIKKVACGTQFSVALTKDGRVFTFGQDRL--IGLPESRARNH 1445

Query: 418  VLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF 477
              RP+ L +L   HV  ++ G  HT+ ++  G ++ +G N   QLG        EPT + 
Sbjct: 1446 N-RPQQLPALSGVHVQDVAVGAEHTLALSSTGDVYAWGSNSEGQLGLGHTNHVREPTVVT 1504

Query: 478  I 478
            +
Sbjct: 1505 M 1505



 Score = 74.7 bits (182), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 77/274 (28%), Positives = 114/274 (41%), Gaps = 39/274 (14%)

Query: 237  VHTCGSNTHGQLGH-GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 295
            V   G+  HGQL   G  +  PT    AP        Q+  G +    +  NG V + G 
Sbjct: 1124 VFLWGAGRHGQLAEAGRNILVPT---TAP--SFSQAQQVVCGQNCTFVIQPNGTVLACGE 1178

Query: 296  GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG-DEHVVALDSSGYVYTWGKGYCGA 354
            GS   LG G   D      I   +   +  +  S G D H +AL  SG V++WG G  G 
Sbjct: 1179 GSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGK 1238

Query: 355  LGHGDEIDKTLPEPLSSLKSHLAVQV------------------------CARKRKTFVL 390
            LGHG+   +  P  + +L+    VQV                        C  K    V 
Sbjct: 1239 LGHGNSDRQRRPRQIEALQGEEVVQVGRGRAAGAGLCRCRSHLHLRLQMSCGFKHSAVVT 1298

Query: 391  VDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRI--LDSLRAHHVSQISTGLYHTVVVTDR 448
             D G ++ FG   +G LG  +   S+K L  R+  L+  +   V+ ++ GL HT+VV+  
Sbjct: 1299 AD-GKLFTFGNGDYGRLGLGN--TSNKKLPERVAALEGYQIGQVANVACGLNHTLVVSAD 1355

Query: 449  GRL---FGFGDNERAQLGHDTLRGCLEPTEIFIQ 479
            G +   FG GD  +  LG+ T +   +   + +Q
Sbjct: 1356 GMMVWAFGDGDYGKLGLGNSTAKSSPQVWAVILQ 1389



 Score = 48.5 bits (114), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 40/143 (27%), Positives = 67/143 (46%), Gaps = 9/143 (6%)

Query: 344  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 403
            V+ WG G  G L    E  + +  P ++     A QV   +  TFV+   G+V   G   
Sbjct: 1124 VFLWGAGRHGQLA---EAGRNILVPTTAPSFSQAQQVVCGQNCTFVIQPNGTVLACGEGS 1180

Query: 404  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLY---HTVVVTDRGRLFGFGDNERA 460
            +G LG   +G SD +    ++ +L+   V+Q+ T      H++ +T+ G +F +GD +  
Sbjct: 1181 YGRLG---QGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYG 1237

Query: 461  QLGHDTLRGCLEPTEIFIQEMEE 483
            +LGH        P +I   + EE
Sbjct: 1238 KLGHGNSDRQRRPRQIEALQGEE 1260


>gi|224127630|ref|XP_002329325.1| predicted protein [Populus trichocarpa]
 gi|222870779|gb|EEF07910.1| predicted protein [Populus trichocarpa]
          Length = 392

 Score =  112 bits (280), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 105/367 (28%), Positives = 159/367 (43%), Gaps = 29/367 (7%)

Query: 125 LISNSSVFSCGSSLCGVLGHGP-ETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQ 183
           + + SSV + GS   G LG G  E  + V   +   P     V V+ S N  A +   G+
Sbjct: 1   MATESSVIAWGSGEDGQLGIGNNEEKEWVCIVKALEPYKVRSV-VAGSRNSLA-ICDDGK 58

Query: 184 VFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 243
           +FT G N     GH    +    P  V+AL  V   Q   G      +  +G  +  G N
Sbjct: 59  LFTWGWNQRGTLGHPPETKTENIPSQVKALANVNIVQAAIGGWHCLAVDDQGRAYAWGGN 118

Query: 244 THGQLGH----GDTLDRPTPKSIAPLEEVGS---VVQIAAGPSYMLAVTGNGVVYSFGSG 296
            +GQ G      D   RP  + I   +   S   V Q+AAG ++ + +T  G V+S+G  
Sbjct: 119 EYGQCGEEPERKDDTGRPLRRDIVIPQRCASKLVVRQVAAGGTHSVVLTREGHVWSWGQ- 177

Query: 297 SNFCLGHGEQHDELQPRAIQTF----RRKGIHVVR-VSAGDEHVVALDSSGYVYTWGKGY 351
                          P  I+      R +G+  VR ++ G  H +AL   G ++ WG   
Sbjct: 178 ------------PWPPGDIKQISVPVRVQGLERVRLIAVGAFHNLALQEDGTLWAWGNNE 225

Query: 352 CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 411
            G LG GD   ++ P  +  L     V + A    +  L D G VYG+G    G LGF D
Sbjct: 226 YGQLGTGDTQPRSQPITVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGD 285

Query: 412 RGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCL 471
              S K++ P+ ++ L    + Q+S G  H+V +T  GR++ FG  +  +LG+       
Sbjct: 286 NDKSSKMV-PQRVNLLVGEDIVQVSCGGTHSVALTRDGRMYTFGRGDHGRLGYGRKVTTG 344

Query: 472 EPTEIFI 478
           +P E+ I
Sbjct: 345 QPMEVPI 351



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 94/350 (26%), Positives = 149/350 (42%), Gaps = 30/350 (8%)

Query: 70  IYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLI-SN 128
           I  G   + Q+ + N     W  +++ L+  +  S           +  G  ++L I  +
Sbjct: 8   IAWGSGEDGQLGIGNNEEKEWVCIVKALEPYKVRS-----------VVAGSRNSLAICDD 56

Query: 129 SSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCG 188
             +F+ G +  G LGH PET      +++   +  ++VQ +    H   V   G+ +  G
Sbjct: 57  GKLFTWGWNQRGTLGHPPETKTENIPSQVKALANVNIVQAAIGGWHCLAVDDQGRAYAWG 116

Query: 189 DNSSFCCGHR-----DTNRPIFRPRLV--EALKGVPCKQVTAGLNFTGFLTIRGHVHTCG 241
            N    CG       DT RP+ R  ++       +  +QV AG   +  LT  GHV + G
Sbjct: 117 GNEYGQCGEEPERKDDTGRPLRRDIVIPQRCASKLVVRQVAAGGTHSVVLTREGHVWSWG 176

Query: 242 SNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCL 301
                    GD      P  +  LE    V  IA G  + LA+  +G ++++G+     L
Sbjct: 177 Q----PWPPGDIKQISVPVRVQGLER---VRLIAVGAFHNLALQEDGTLWAWGNNEYGQL 229

Query: 302 GHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG--D 359
           G G+     QP  +Q     G+ +V ++AG  H  AL   G VY WG+G  G LG G  D
Sbjct: 230 GTGDTQPRSQPITVQGL--SGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDND 287

Query: 360 EIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGF 409
           +  K +P+ ++ L     VQV      +  L   G +Y FG    G LG+
Sbjct: 288 KSSKMVPQRVNLLVGEDIVQVSCGGTHSVALTRDGRMYTFGRGDHGRLGY 337


>gi|61563742|ref|NP_060382.3| probable E3 ubiquitin-protein ligase HERC6 isoform 1 [Homo sapiens]
 gi|74750679|sp|Q8IVU3.2|HERC6_HUMAN RecName: Full=Probable E3 ubiquitin-protein ligase HERC6; AltName:
           Full=HECT domain and RCC1-like domain-containing protein
           6
 gi|48686728|gb|AAQ14893.1|AF336798_1 HERC6 [Homo sapiens]
 gi|66840150|gb|AAH42047.2| Hect domain and RLD 6 [Homo sapiens]
 gi|194381386|dbj|BAG58647.1| unnamed protein product [Homo sapiens]
          Length = 1022

 Score =  112 bits (280), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 83/252 (32%), Positives = 121/252 (48%), Gaps = 5/252 (1%)

Query: 215 GVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQI 274
           G    Q  +G   +  L     V +CG N+ GQLG         P+ I  LE +  V  +
Sbjct: 22  GAELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGELPEPIQALETL-IVDLV 80

Query: 275 AAGPSYMLAVTGNGVVYSFGSGSNFCLGHGE-QHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           + G  + LAV   G V+++G+GS   LG GE +     P+ I T     I +++VS G  
Sbjct: 81  SCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKIMTL--NDIKIIQVSCGHY 138

Query: 334 HVVALDSSGYVYTWGKGYCGALGHGDEI-DKTLPEPLSSLKSHLAVQVCARKRKTFVLVD 392
           H +AL     V++WGK   G LG G E   +  P+ + SL+     QV A    +F L  
Sbjct: 139 HSLALSKDSQVFSWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSL 198

Query: 393 TGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLF 452
            G+ +G+G    G L    R V  +  +P  + +L+   V  IS G  HT V+T  G++F
Sbjct: 199 CGTSFGWGSNSAGQLALSGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGKVF 258

Query: 453 GFGDNERAQLGH 464
            FGDN   QLG+
Sbjct: 259 TFGDNRSGQLGY 270



 Score =  102 bits (253), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 89/302 (29%), Positives = 148/302 (49%), Gaps = 20/302 (6%)

Query: 163 AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 222
           A ++Q ++ E H+  +L + +V +CGDNS    G R   R    P  ++AL+ +    V+
Sbjct: 23  AELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGEL-PEPIQALETLIVDLVS 81

Query: 223 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRP-TPKSIAPLEEVGSVVQIAAGPSYM 281
            G   +  +  +G V   G+ + GQLG G+  +   TPK I  L ++  ++Q++ G  + 
Sbjct: 82  CGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKIMTLNDI-KIIQVSCGHYHS 140

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQH-DELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 340
           LA++ +  V+S+G  S+  LG G++   +  P+ +++   +GI + +V+AG  H  AL  
Sbjct: 141 LALSKDSQVFSWGKNSHGQLGLGKEFPSQASPQRVRSL--EGIPLAQVAAGGAHSFALSL 198

Query: 341 SGYVYTWGKGYCGAL---GHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVY 397
            G  + WG    G L   G    +    P  + +LK+   V +      T VL   G V+
Sbjct: 199 CGTSFGWGSNSAGQLALSGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGKVF 258

Query: 398 GFGWMGFGSLGF---PDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV-VTDRGRLFG 453
            FG    G LG+   P++     V R   +D L    VSQI  G YHT+  V   G++  
Sbjct: 259 TFGDNRSGQLGYSPTPEKRGPQLVER---IDGL----VSQIDCGSYHTLAYVHTTGQVVS 311

Query: 454 FG 455
           FG
Sbjct: 312 FG 313



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 79/297 (26%), Positives = 130/297 (43%), Gaps = 19/297 (6%)

Query: 114 MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHV 165
           +Q  +G  H+LL+ +N  V SCG +  G LG         PE  Q +    ++       
Sbjct: 26  LQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGELPEPIQALETLIVDL------ 79

Query: 166 VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 225
             VS  + H+  V   G+VF  G  S    G  +     F P+ +  L  +   QV+ G 
Sbjct: 80  --VSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKIMTLNDIKIIQVSCGH 137

Query: 226 NFTGFLTIRGHVHTCGSNTHGQLGHGDTL-DRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 284
             +  L+    V + G N+HGQLG G     + +P+ +  LE +  + Q+AAG ++  A+
Sbjct: 138 YHSLALSKDSQVFSWGKNSHGQLGLGKEFPSQASPQRVRSLEGI-PLAQVAAGGAHSFAL 196

Query: 285 TGNGVVYSFGSGSNFCLGHGEQHDELQP-RAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 343
           +  G  + +GS S   L    ++  +Q  + +     K + VV +S GD H   L   G 
Sbjct: 197 SLCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGK 256

Query: 344 VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 400
           V+T+G    G LG+    +K  P+ +  +   ++   C        +  TG V  FG
Sbjct: 257 VFTFGDNRSGQLGYSPTPEKRGPQLVERIDGLVSQIDCGSYHTLAYVHTTGQVVSFG 313


>gi|313221348|emb|CBY32102.1| unnamed protein product [Oikopleura dioica]
          Length = 1199

 Score =  112 bits (279), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 93/308 (30%), Positives = 144/308 (46%), Gaps = 17/308 (5%)

Query: 107 VETSAGNMQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHV 165
           ++ +   + I +G  HT+ L S   V+SCGS+  G LG   + +QC       F  A  +
Sbjct: 27  IDANQSVISIASGLRHTVYLTSTRKVYSCGSNEFGQLGQ--QKSQCRPSLVTGF-GAEEI 83

Query: 166 VQVSASENHAAFVLQSGQVFTCGD--NSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTA 223
             V+A +  +  + +SG +F  G   N    C        +  P+L++ +      QV  
Sbjct: 84  FHVAAGDFFSIAIAESGLLFGWGRSLNGELMCKQDS----LHEPKLLDKIMHWSVVQVAC 139

Query: 224 GLNFTGFLTIRGHVHTCGSNTHGQLGHGDT-LDRPTPKSIAPLEEVGSVVQIAAGPSYML 282
           G      LT  G + + GSNT GQLG G + ++   P  IA L     + QI AG  +  
Sbjct: 140 GAQHCIALTEEGTILSWGSNTQGQLGLGSSEIEFLEPTIIASLNAF-PISQICAGAYHSG 198

Query: 283 AVTGNGVVYSFGSGSNFCLGHGEQHDELQ--PRAIQTFRRKGIHVVRVSAGDEHVVALDS 340
            ++ +G ++++G  +   LGHG   D  Q  PR ++T R +   VV V+ G+EH V    
Sbjct: 199 VLSPSGTLFTWGKNNWGQLGHGNS-DSFQSSPRLVKTLRHQ--EVVFVAMGEEHSVCRTR 255

Query: 341 SGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 400
           +G V++WG G  G LGH    + T P+ +  L      Q+C  +R T  L D   + GFG
Sbjct: 256 NGGVFSWGHGGNGQLGHNSMANVTQPKKIMELMGTTVCQICCGRRHTISLTDKRKLLGFG 315

Query: 401 WMGFGSLG 408
                 LG
Sbjct: 316 LNSNNQLG 323



 Score =  109 bits (272), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 82/265 (30%), Positives = 136/265 (51%), Gaps = 23/265 (8%)

Query: 221 VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 280
           + +GL  T +LT    V++CGSN  GQLG   +  RP+  +    EE+     +AAG  +
Sbjct: 36  IASGLRHTVYLTSTRKVYSCGSNEFGQLGQQKSQCRPSLVTGFGAEEI---FHVAAGDFF 92

Query: 281 MLAVTGNGVVYSFGSGSNFCLGHGE---QHDEL-QPRAIQTFRRKGIH--VVRVSAGDEH 334
            +A+  +G+++ +G   N     GE   + D L +P+ +     K +H  VV+V+ G +H
Sbjct: 93  SIAIAESGLLFGWGRSLN-----GELMCKQDSLHEPKLLD----KIMHWSVVQVACGAQH 143

Query: 335 VVALDSSGYVYTWGKGYCGALGHGD-EIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDT 393
            +AL   G + +WG    G LG G  EI+   P  ++SL +    Q+CA    + VL  +
Sbjct: 144 CIALTEEGTILSWGSNTQGQLGLGSSEIEFLEPTIIASLNAFPISQICAGAYHSGVLSPS 203

Query: 394 GSVYGFGWMGFGSLGFPDRGVSDKVLR-PRILDSLRAHHVSQISTGLYHTVVVTDRGRLF 452
           G+++ +G   +G LG    G SD     PR++ +LR   V  ++ G  H+V  T  G +F
Sbjct: 204 GTLFTWGKNNWGQLG---HGNSDSFQSSPRLVKTLRHQEVVFVAMGEEHSVCRTRNGGVF 260

Query: 453 GFGDNERAQLGHDTLRGCLEPTEIF 477
            +G     QLGH+++    +P +I 
Sbjct: 261 SWGHGGNGQLGHNSMANVTQPKKIM 285



 Score =  105 bits (262), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 94/338 (27%), Positives = 152/338 (44%), Gaps = 20/338 (5%)

Query: 131 VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDN 190
           ++  G +  G LG G E       + I+  +   V+ +++   H  ++  + +V++CG N
Sbjct: 1   MYGWGKNDYGQLGLGSENMLISCPSPID--ANQSVISIASGLRHTVYLTSTRKVYSCGSN 58

Query: 191 SSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLG- 249
                G     +   RP LV          V AG  F+  +   G +   G + +G+L  
Sbjct: 59  E---FGQLGQQKSQCRPSLVTGFGAEEIFHVAAGDFFSIAIAESGLLFGWGRSLNGELMC 115

Query: 250 HGDTLDRPTPKSIAPLEEV--GSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH 307
             D+L  P       L+++   SVVQ+A G  + +A+T  G + S+GS +   LG G   
Sbjct: 116 KQDSLHEP-----KLLDKIMHWSVVQVACGAQHCIALTEEGTILSWGSNTQGQLGLGSSE 170

Query: 308 DE-LQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEID-KTL 365
            E L+P  I +       + ++ AG  H   L  SG ++TWGK   G LGHG+    ++ 
Sbjct: 171 IEFLEPTIIASL--NAFPISQICAGAYHSGVLSPSGTLFTWGKNNWGQLGHGNSDSFQSS 228

Query: 366 PEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILD 425
           P  + +L+    V V   +  +      G V+ +G  G G LG         V +P+ + 
Sbjct: 229 PRLVKTLRHQEVVFVAMGEEHSVCRTRNGGVFSWGHGGNGQLGHNSMA---NVTQPKKIM 285

Query: 426 SLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 463
            L    V QI  G  HT+ +TD+ +L GFG N   QLG
Sbjct: 286 ELMGTTVCQICCGRRHTISLTDKRKLLGFGLNSNNQLG 323



 Score = 89.4 bits (220), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 71/228 (31%), Positives = 110/228 (48%), Gaps = 17/228 (7%)

Query: 241 GSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNF 299
           G N +GQLG G + +    P   +P++   SV+ IA+G  + + +T    VYS GS    
Sbjct: 5   GKNDYGQLGLGSENMLISCP---SPIDANQSVISIASGLRHTVYLTSTRKVYSCGSNE-- 59

Query: 300 CLGH-GEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 358
             G  G+Q  + +P  +  F  +   +  V+AGD   +A+  SG ++ WG+   G L   
Sbjct: 60  -FGQLGQQKSQCRPSLVTGFGAE--EIFHVAAGDFFSIAIAESGLLFGWGRSLNGELMCK 116

Query: 359 DEIDKTLPEP--LSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSD 416
            +   +L EP  L  +     VQV    +    L + G++  +G    G LG     +  
Sbjct: 117 QD---SLHEPKLLDKIMHWSVVQVACGAQHCIALTEEGTILSWGSNTQGQLGLGSSEI-- 171

Query: 417 KVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 464
           + L P I+ SL A  +SQI  G YH+ V++  G LF +G N   QLGH
Sbjct: 172 EFLEPTIIASLNAFPISQICAGAYHSGVLSPSGTLFTWGKNNWGQLGH 219


>gi|452822986|gb|EME30000.1| E3 ubiquitin-protein ligase HERC1 [Galdieria sulphuraria]
          Length = 456

 Score =  112 bits (279), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 86/295 (29%), Positives = 134/295 (45%), Gaps = 10/295 (3%)

Query: 181 SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTC 240
           S  ++T G   ++  G R T     +P L++  +    +QV  G   T  L   G +H+ 
Sbjct: 9   SSALYTWGRAKNYRLGRRGTRDDSCQPELIKVFENCAIQQVACGGGHTLVLLEDGCLHSF 68

Query: 241 GSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 300
           G N +GQLG+G  +D P   S         ++ +A G  +  A+  NG V+++G G N  
Sbjct: 69  GYNQYGQLGNGTKVDSPLDASRDISSLSNKLIAVACGRYHSAALDVNGTVFTWGGGKNGR 128

Query: 301 LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 360
           LGH ++     P  I    R      ++  G  H+ A  +   +YTWG G  G LG G  
Sbjct: 129 LGHNDEQTRTIPCRITHLPR----AHKIFCG-YHITAAITDDGLYTWGWGEHGQLGQGSL 183

Query: 361 IDKTLPEPLSSLKSHLAV-QVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVL 419
            D   P+ +    ++LA+ Q+    R   V  ++G VY +G   FG LG    G  +++ 
Sbjct: 184 EDSYGPKKVIFDDANLAISQLACGDRHCLVRTESGDVYTWGSNEFGQLGI---GRYNEIY 240

Query: 420 -RPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEP 473
             P +L SL    V+ ++ G  H+  VT+ G LF +G     Q GH     C  P
Sbjct: 241 SSPVLLTSLAGMMVTFVAAGDRHSAAVTNTGSLFTWGCGAEGQCGHGDYNDCDMP 295



 Score =  105 bits (262), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 91/319 (28%), Positives = 144/319 (45%), Gaps = 25/319 (7%)

Query: 115 QITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
           Q+  G  HTL L+ +  + S G +  G LG+G +    +  +R     +  ++ V+    
Sbjct: 48  QVACGGGHTLVLLEDGCLHSFGYNQYGQLGNGTKVDSPLDASRDISSLSNKLIAVACGRY 107

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCK--------QVTAGL 225
           H+A +  +G VFT G   +   GH D           E  + +PC+        ++  G 
Sbjct: 108 HSAALDVNGTVFTWGGGKNGRLGHND-----------EQTRTIPCRITHLPRAHKIFCGY 156

Query: 226 NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 285
           + T  +T  G ++T G   HGQLG G   D   PK +   +   ++ Q+A G  + L  T
Sbjct: 157 HITAAITDDG-LYTWGWGEHGQLGQGSLEDSYGPKKVIFDDANLAISQLACGDRHCLVRT 215

Query: 286 GNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVY 345
            +G VY++GS     LG G +++E+    +      G+ V  V+AGD H  A+ ++G ++
Sbjct: 216 ESGDVYTWGSNEFGQLGIG-RYNEIYSSPVLLTSLAGMMVTFVAAGDRHSAAVTNTGSLF 274

Query: 346 TWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFG 405
           TWG G  G  GHGD  D  +P  + SL     ++V      T  L     +Y FG   +G
Sbjct: 275 TWGCGAEGQCGHGDYNDCDMPFLVESLVGVFILKVFCGHNFTVALSKDNDIYVFGNNSYG 334

Query: 406 SLGFPDRGVSDKVLRPRIL 424
            LG    G       PR L
Sbjct: 335 QLG---DGSKSSCCTPRKL 350



 Score = 68.9 bits (167), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 57/195 (29%), Positives = 91/195 (46%), Gaps = 12/195 (6%)

Query: 289 VVYSFGSGSNFCLGH-GEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 347
            +Y++G   N+ LG  G + D  QP  I+ F    I   +V+ G  H + L   G ++++
Sbjct: 11  ALYTWGRAKNYRLGRRGTRDDSCQPELIKVFENCAIQ--QVACGGGHTLVLLEDGCLHSF 68

Query: 348 GKGYCGALGHGDEIDKTL--PEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFG 405
           G    G LG+G ++D  L     +SSL + L    C R     + V+ G+V+ +G    G
Sbjct: 69  GYNQYGQLGNGTKVDSPLDASRDISSLSNKLIAVACGRYHSAALDVN-GTVFTWGGGKNG 127

Query: 406 SLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHD 465
            LG  D     + +  RI    RAH   +I  G + T  +TD G L+ +G  E  QLG  
Sbjct: 128 RLGHNDE--QTRTIPCRITHLPRAH---KIFCGYHITAAITDDG-LYTWGWGEHGQLGQG 181

Query: 466 TLRGCLEPTEIFIQE 480
           +L     P ++   +
Sbjct: 182 SLEDSYGPKKVIFDD 196



 Score = 49.7 bits (117), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 35/127 (27%), Positives = 62/127 (48%), Gaps = 3/127 (2%)

Query: 340 SSGYVYTWGKGYCGALG-HGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYG 398
           +S  +YTWG+     LG  G   D   PE +   ++    QV      T VL++ G ++ 
Sbjct: 8   ASSALYTWGRAKNYRLGRRGTRDDSCQPELIKVFENCAIQQVACGGGHTLVLLEDGCLHS 67

Query: 399 FGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNE 458
           FG+  +G LG   + V   +   R + SL ++ +  ++ G YH+  +   G +F +G  +
Sbjct: 68  FGYNQYGQLGNGTK-VDSPLDASRDISSL-SNKLIAVACGRYHSAALDVNGTVFTWGGGK 125

Query: 459 RAQLGHD 465
             +LGH+
Sbjct: 126 NGRLGHN 132


>gi|444915451|ref|ZP_21235583.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
 gi|444713382|gb|ELW54282.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
          Length = 746

 Score =  112 bits (279), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 104/367 (28%), Positives = 163/367 (44%), Gaps = 21/367 (5%)

Query: 111 AGNMQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS 169
           +G + I  G  H L L+S+ +V + G +  G LG G  T +      +       VV ++
Sbjct: 145 SGVVAIAAGNNHALALLSDGTVRAWGYNAYGQLGDGTTTQRRTPVAVLGLTG---VVAIA 201

Query: 170 ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
           A ENH+  VL  G V   G+N+    G   T +    P LV +L GV    + AG N + 
Sbjct: 202 AGENHSLAVLADGTVRAWGNNTYGRLGDGTTTQRT-SPVLVSSLTGVTA--IAAGANHSL 258

Query: 230 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 289
            +   G V   G N  G+LG G T  R TP ++  L     V +I+AG  + LA+  +G 
Sbjct: 259 AVLADGTVRAWGYNASGRLGDGTTTQRATPVAVPGLT---GVTEISAGGGHSLALLADGT 315

Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 349
             ++GS  +  LG G   +   P  + +       V  +SAG  H +AL + G    WG 
Sbjct: 316 ARAWGSNVSGQLGDGTVSNRTSPVLVSSL----TGVTALSAGGNHSLALLADGTARAWGA 371

Query: 350 GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGF 409
              G LG G    +TLP  L  L    A+   A    +  ++  G+V  +G   +G LG 
Sbjct: 372 NVSGQLGDGTTTQRTLPVGLPGLTGVAAL--AAGGYHSLAVLANGTVRAWGHNTYGQLG- 428

Query: 410 PDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG 469
              G + +   P ++ +L    V  ++ G  H++ +   G +  +G+N   QLG  T   
Sbjct: 429 --DGSTAQRTAPVVVPALTG--VVSLTAGYDHSLALLSDGTVRAWGNNASGQLGDGTTNQ 484

Query: 470 CLEPTEI 476
              P ++
Sbjct: 485 RGTPVQV 491



 Score =  110 bits (275), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 105/359 (29%), Positives = 162/359 (45%), Gaps = 29/359 (8%)

Query: 112 GNMQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSA 170
           G   +  G YH+L +++N +V + G +  G LG G    +      +  P+   VV ++A
Sbjct: 396 GVAALAAGGYHSLAVLANGTVRAWGHNTYGQLGDGSTAQRTAP---VVVPALTGVVSLTA 452

Query: 171 SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNR---PIFRPRL--VEALKGVPCKQVTAGL 225
             +H+  +L  G V   G+N+S   G   TN+   P+    L  V AL G       A  
Sbjct: 453 GYDHSLALLSDGTVRAWGNNASGQLGDGTTNQRGTPVQVSGLTNVVALSGGKLYHALA-- 510

Query: 226 NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 285
                L   G V   G N +GQLG G T +R TP +++ L  V   V IAAG  Y LA+ 
Sbjct: 511 -----LLSDGTVRAWGYNMNGQLGDGSTSNRWTPVAVSGLTNV---VAIAAGGDYSLALQ 562

Query: 286 GNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVY 345
            NG V S+G G    LG         P+A+        +VV ++AG  HV+AL + G VY
Sbjct: 563 SNGTVQSWGYGVYGPLGRDYDTYSPTPKAVPGV----TNVVAIAAGANHVLALRADGTVY 618

Query: 346 TWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFG 405
            WG+   G LG G  + +  P  +  L +   V +      +  L   G+VY +G+    
Sbjct: 619 AWGRNDFGQLGDGTTVQRNTPVQVPGLTN--VVAIATGWDHSLALRADGTVYAWGYNYAR 676

Query: 406 SLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 464
            LG  D   ++    P  +  L   +V  ++ G   ++ +   G +  +GDN   +LG+
Sbjct: 677 QLG--DGSTANYRQTPAPVPGLT--NVVAVTAGGNQSLALLSSGAVHAWGDNSHGELGN 731



 Score =  102 bits (254), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 104/345 (30%), Positives = 154/345 (44%), Gaps = 20/345 (5%)

Query: 119 GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
           G Y   L+ + +V + G++  G LG G  T    S   +  P  + VV ++A  NHA  +
Sbjct: 104 GEYSLALLGDGTVRAWGNNTYGQLGDG-TTPHRASPGAV--PGLSGVVAIAAGNNHALAL 160

Query: 179 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVH 238
           L  G V   G N+    G   T +    P  V  L GV    + AG N +  +   G V 
Sbjct: 161 LSDGTVRAWGYNAYGQLGDGTTTQ-RRTPVAVLGLTGVVA--IAAGENHSLAVLADGTVR 217

Query: 239 TCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
             G+NT+G+LG G T  R +P  ++ L     V  IAAG ++ LAV  +G V ++G  ++
Sbjct: 218 AWGNNTYGRLGDGTTTQRTSPVLVSSLT---GVTAIAAGANHSLAVLADGTVRAWGYNAS 274

Query: 299 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 358
             LG G       P A+         V  +SAG  H +AL + G    WG    G LG G
Sbjct: 275 GRLGDGTTTQRATPVAVPGL----TGVTEISAGGGHSLALLADGTARAWGSNVSGQLGDG 330

Query: 359 DEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKV 418
              ++T P  +SSL    A  + A    +  L+  G+   +G    G LG    G + + 
Sbjct: 331 TVSNRTSPVLVSSLTGVTA--LSAGGNHSLALLADGTARAWGANVSGQLG---DGTTTQR 385

Query: 419 LRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 463
             P  L  L    V+ ++ G YH++ V   G +  +G N   QLG
Sbjct: 386 TLPVGLPGLTG--VAALAAGGYHSLAVLANGTVRAWGHNTYGQLG 428



 Score =  101 bits (252), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 96/324 (29%), Positives = 146/324 (45%), Gaps = 19/324 (5%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
            V++++ + H+      G V   GDN+S   G   T +    P  V  L G     V+AG
Sbjct: 47  AVRLASGKAHSLLATPDGTVRAWGDNASGQLGDGTTTQ-RSSPTAVPGLAG--AVAVSAG 103

Query: 225 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 284
             ++  L   G V   G+NT+GQLG G T  R +P ++  L     VV IAAG ++ LA+
Sbjct: 104 GEYSLALLGDGTVRAWGNNTYGQLGDGTTPHRASPGAVPGLS---GVVAIAAGNNHALAL 160

Query: 285 TGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
             +G V ++G  +   LG G       P A+         VV ++AG+ H +A+ + G V
Sbjct: 161 LSDGTVRAWGYNAYGQLGDGTTTQRRTPVAVLGL----TGVVAIAAGENHSLAVLADGTV 216

Query: 345 YTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGF 404
             WG    G LG G    +T P  +SSL    A+   A      VL D G+V  +G+   
Sbjct: 217 RAWGNNTYGRLGDGTTTQRTSPVLVSSLTGVTAIAAGA-NHSLAVLAD-GTVRAWGYNAS 274

Query: 405 GSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 464
           G LG    G + +   P  +  L    V++IS G  H++ +   G    +G N   QLG 
Sbjct: 275 GRLG---DGTTTQRATPVAVPGLTG--VTEISAGGGHSLALLADGTARAWGSNVSGQLGD 329

Query: 465 DTLRGCLEPTEIFIQEMEEDTGLA 488
            T+     P  + +  +   T L+
Sbjct: 330 GTVSNRTSP--VLVSSLTGVTALS 351



 Score = 83.2 bits (204), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 82/270 (30%), Positives = 126/270 (46%), Gaps = 25/270 (9%)

Query: 104 SDIVETSAGNMQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSA 162
           +++V  S G +      YH L L+S+ +V + G ++ G LG G  + +   +T +     
Sbjct: 495 TNVVALSGGKL------YHALALLSDGTVRAWGYNMNGQLGDGSTSNR---WTPVAVSGL 545

Query: 163 AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHR-DTNRPIFRPRLVEALKGVPCKQV 221
            +VV ++A  +++  +  +G V + G       G   DT  P   P+ V  +  V    +
Sbjct: 546 TNVVAIAAGGDYSLALQSNGTVQSWGYGVYGPLGRDYDTYSPT--PKAVPGVTNVVA--I 601

Query: 222 TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 281
            AG N    L   G V+  G N  GQLG G T+ R TP  +  L  V   V IA G  + 
Sbjct: 602 AAGANHVLALRADGTVYAWGRNDFGQLGDGTTVQRNTPVQVPGLTNV---VAIATGWDHS 658

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQ-PRAIQTFRRKGIHVVRVSAGDEHVVALDS 340
           LA+  +G VY++G      LG G   +  Q P  +        +VV V+AG    +AL S
Sbjct: 659 LALRADGTVYAWGYNYARQLGDGSTANYRQTPAPVPGL----TNVVAVTAGGNQSLALLS 714

Query: 341 SGYVYTWGKGYCGALGHGDEIDKTLPEPLS 370
           SG V+ WG    G LG+G  +  T P P++
Sbjct: 715 SGAVHAWGDNSHGELGNGSTL--TPPAPVA 742



 Score = 58.9 bits (141), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 48/153 (31%), Positives = 70/153 (45%), Gaps = 6/153 (3%)

Query: 114 MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           + I  G  H L L ++ +V++ G +  G LG G   T     T +  P   +VV ++   
Sbjct: 599 VAIAAGANHVLALRADGTVYAWGRNDFGQLGDG---TTVQRNTPVQVPGLTNVVAIATGW 655

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
           +H+  +   G V+  G N +   G   T      P  V  L  V    VTAG N +  L 
Sbjct: 656 DHSLALRADGTVYAWGYNYARQLGDGSTANYRQTPAPVPGLTNVVA--VTAGGNQSLALL 713

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL 265
             G VH  G N+HG+LG+G TL  P P ++  L
Sbjct: 714 SSGAVHAWGDNSHGELGNGSTLTPPAPVAVTGL 746


>gi|298713261|emb|CBJ26957.1| conserved unknown protein [Ectocarpus siliculosus]
          Length = 530

 Score =  112 bits (279), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 105/364 (28%), Positives = 155/364 (42%), Gaps = 30/364 (8%)

Query: 97  LQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHG------PETTQ 150
           L       DIV  +AGN ++T      +L +   V+SCG +  G  G G      PE   
Sbjct: 37  LSQTSRGKDIVGVTAGN-ELTA-----VLTNTGEVYSCGYNSEGQCGIGEIDETVPEMVP 90

Query: 151 CVSFTRINFPS-----AAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIF 205
            ++   +  PS        +V       H   V + G++ TCG N+S   GH +  +   
Sbjct: 91  SLTKVTLREPSFRPAGRVSLVHSGNGSEHLVVVTEEGELQTCGRNNSGQLGHGEVGKGYS 150

Query: 206 RPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL 265
            PR V    G    +V    + T  +T      T G N +GQLGHGD   R  P ++A  
Sbjct: 151 LPRPVAGFAGYRVTKVACSYSHTVVVTDDDRTWTFGGNGYGQLGHGDHSSRSAPAALACF 210

Query: 266 EEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLG--HGE-QHDELQPRAIQTFRRKG 322
           + +G V+ +A G  + +    +G +YSFG   +  LG   GE +   +Q RA  +     
Sbjct: 211 QGLG-VLSVACGVYHTVVSVASGGLYSFGKNDHGQLGLEGGESRFTPVQHRACTSV---- 265

Query: 323 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCA 382
             V +++ G  H VAL  +G V  +G+   G LG G          +  L     +QV  
Sbjct: 266 --VEQLACGYYHTVALSRAGEVVAFGRNDYGQLGLGHRESTWQGGQVPDLAGLRIIQVAC 323

Query: 383 RKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHT 442
               T  L D G VY FG    G LG    G  +   RP  ++ L    V Q++ G YHT
Sbjct: 324 GSYHTISLDDEGRVYPFGRNNHGQLG---TGTREDACRPCFVEGLSQSFVCQVAAGFYHT 380

Query: 443 VVVT 446
           + +T
Sbjct: 381 LCLT 384



 Score =  108 bits (270), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 99/357 (27%), Positives = 155/357 (43%), Gaps = 24/357 (6%)

Query: 131 VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDN 190
           ++  G + CG LG G +T +  + T         +V V+A     A +  +G+V++CG N
Sbjct: 13  LYGFGQNACGELGLG-DTLERHTPTLSQTSRGKDIVGVTAGNELTAVLTNTGEVYSCGYN 71

Query: 191 SSFCCGHRDTNRPIFRPRLVEALKGV--------PCKQVT-----AGLNFTGFLTIRGHV 237
           S   CG  + +  +  P +V +L  V        P  +V+      G      +T  G +
Sbjct: 72  SEGQCGIGEIDETV--PEMVPSLTKVTLREPSFRPAGRVSLVHSGNGSEHLVVVTEEGEL 129

Query: 238 HTCGSNTHGQLGHGDT-LDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 296
            TCG N  GQLGHG+       P+ +A       V ++A   S+ + VT +   ++FG  
Sbjct: 130 QTCGRNNSGQLGHGEVGKGYSLPRPVAGFAGY-RVTKVACSYSHTVVVTDDDRTWTFGGN 188

Query: 297 SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 356
               LGHG+      P A+  F  +G+ V+ V+ G  H V   +SG +Y++GK   G LG
Sbjct: 189 GYGQLGHGDHSSRSAPAALACF--QGLGVLSVACGVYHTVVSVASGGLYSFGKNDHGQLG 246

Query: 357 HGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSD 416
                 +  P    +  S +    C     T  L   G V  FG   +G LG   R   +
Sbjct: 247 LEGGESRFTPVQHRACTSVVEQLACGYYH-TVALSRAGEVVAFGRNDYGQLGLGHR---E 302

Query: 417 KVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEP 473
              +   +  L    + Q++ G YHT+ + D GR++ FG N   QLG  T      P
Sbjct: 303 STWQGGQVPDLAGLRIIQVACGSYHTISLDDEGRVYPFGRNNHGQLGTGTREDACRP 359



 Score = 53.1 bits (126), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 58/193 (30%), Positives = 89/193 (46%), Gaps = 13/193 (6%)

Query: 112 GNMQITTGRYHTLL-ISNSSVFSCGSSLCGVLG-HGPETTQCVSFTRINFPSAAHVV-QV 168
           G + +  G YHT++ +++  ++S G +  G LG  G E+     FT +   +   VV Q+
Sbjct: 214 GVLSVACGVYHTVVSVASGGLYSFGKNDHGQLGLEGGES----RFTPVQHRACTSVVEQL 269

Query: 169 SASENHAAFVLQSGQVFTCGDNS--SFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN 226
           +    H   + ++G+V   G N       GHR++    ++   V  L G+   QV  G  
Sbjct: 270 ACGYYHTVALSRAGEVVAFGRNDYGQLGLGHREST---WQGGQVPDLAGLRIIQVACGSY 326

Query: 227 FTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTG 286
            T  L   G V+  G N HGQLG G   D   P  +  L +   V Q+AAG  + L +TG
Sbjct: 327 HTISLDDEGRVYPFGRNNHGQLGTGTREDACRPCFVEGLSQ-SFVCQVAAGFYHTLCLTG 385

Query: 287 NGVVYSFGSGSNF 299
             +    G GS F
Sbjct: 386 PPLERKAGHGSAF 398


>gi|431917308|gb|ELK16841.1| Putative E3 ubiquitin-protein ligase HERC2 [Pteropus alecto]
          Length = 883

 Score =  112 bits (279), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 86/304 (28%), Positives = 145/304 (47%), Gaps = 23/304 (7%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V Q++ +E     + +SG+V+T   +S               P+LV+ L      ++ A 
Sbjct: 454 VSQIACAEKRFLILSRSGRVYTQAYSSD-----------ALAPQLVQGLVSRNIVKIAAH 502

Query: 225 LNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGS-VVQIAAGPS 279
            +   +L +   G V++ G    G+LGHGDT+    PK I+    ++ G  VV IA G +
Sbjct: 503 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKLISAFCGKQAGQRVVHIACGST 562

Query: 280 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS--AGDEHVVA 337
           Y  A+T  G +Y++G G+   LGHG   DE  P  +     KG+ V+ V+  +GD   +A
Sbjct: 563 YSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGL--KGLKVIDVACGSGDAQTLA 620

Query: 338 LDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVY 397
           +  +G V++WG G  G LG G       P+ +  L+    V+V    + +  L   G VY
Sbjct: 621 VTENGQVWSWGDGDYGKLGRGGSDGCKTPKLVEKLQDLDVVKVRCGSQFSVALTKDGQVY 680

Query: 398 GFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDN 457
            +G      LG    G  + V  P++L+ L+   V  ++ G  H + +T+   +  +G N
Sbjct: 681 SWGKGDNQRLG---HGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSN 737

Query: 458 ERAQ 461
           ++ Q
Sbjct: 738 DQCQ 741



 Score =  102 bits (253), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 63/203 (31%), Positives = 108/203 (53%), Gaps = 9/203 (4%)

Query: 270 SVVQIAAGPS--YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTF--RRKGIHV 325
           ++V+IAA     + LA+   G VYS+G G    LGHG+     +P+ I  F  ++ G  V
Sbjct: 495 NIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKLISAFCGKQAGQRV 554

Query: 326 VRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVC--AR 383
           V ++ G  +  A+ + G +YTWG+G  G LGHG   D+ +P  ++ LK    + V   + 
Sbjct: 555 VHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSG 614

Query: 384 KRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV 443
             +T  + + G V+ +G   +G LG   RG SD    P++++ L+   V ++  G   +V
Sbjct: 615 DAQTLAVTENGQVWSWGDGDYGKLG---RGGSDGCKTPKLVEKLQDLDVVKVRCGSQFSV 671

Query: 444 VVTDRGRLFGFGDNERAQLGHDT 466
            +T  G+++ +G  +  +LGH T
Sbjct: 672 ALTKDGQVYSWGKGDNQRLGHGT 694



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 75/261 (28%), Positives = 118/261 (45%), Gaps = 19/261 (7%)

Query: 117 TTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSA-------AHVVQVS 169
           + G ++  L +   V+S G    G LGHG      V        SA         VV ++
Sbjct: 503 SDGHHYLALAATGEVYSWGCGDGGRLGHG----DTVPLEEPKLISAFCGKQAGQRVVHIA 558

Query: 170 ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
               ++A +   G+++T G  +    GH  +      P LV  LKG+    V  G     
Sbjct: 559 CGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVACGSGDAQ 617

Query: 230 FLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN 287
            L +   G V + G   +G+LG G +    TPK +  L+++  VV++  G  + +A+T +
Sbjct: 618 TLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLVEKLQDL-DVVKVRCGSQFSVALTKD 676

Query: 288 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 347
           G VYS+G G N  LGHG +     P+ ++    +G  V+ V+AG  H +AL     V++W
Sbjct: 677 GQVYSWGKGDNQRLGHGTEEHVRYPKLLEGL--QGKKVIDVAAGSTHCLALTEDSEVHSW 734

Query: 348 GKGYCGALGHGDEIDKTLPEP 368
           G        H D +  T PEP
Sbjct: 735 GSN--DQCQHFDTLHATKPEP 753



 Score = 71.6 bits (174), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 60/221 (27%), Positives = 99/221 (44%), Gaps = 20/221 (9%)

Query: 259 PKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTF 318
           P   A L  +G V QIA      L ++ +G VY+    S          D L P+ +Q  
Sbjct: 443 PIQCAGLASLG-VSQIACAEKRFLILSRSGRVYTQAYSS----------DALAPQLVQGL 491

Query: 319 RRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLA- 377
             + I  +   +   H +AL ++G VY+WG G  G LGHGD +    P+ +S+     A 
Sbjct: 492 VSRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKLISAFCGKQAG 551

Query: 378 ---VQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQ 434
              V +      +  +   G +Y +G   +G LG    G S+    P ++  L+   V  
Sbjct: 552 QRVVHIACGSTYSAAITAEGELYTWGRGNYGRLG---HGSSEDEAIPMLVAGLKGLKVID 608

Query: 435 IS--TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEP 473
           ++  +G   T+ VT+ G+++ +GD +  +LG     GC  P
Sbjct: 609 VACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTP 649


>gi|410896622|ref|XP_003961798.1| PREDICTED: RCC1 and BTB domain-containing protein 1-like [Takifugu
           rubripes]
          Length = 531

 Score =  112 bits (279), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 79/255 (30%), Positives = 124/255 (48%), Gaps = 11/255 (4%)

Query: 230 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSV-VQIAAGPSYMLAVTGNG 288
           ++T    V+  G N    LG GD+     PK +  L     V +   +GP  +LA T +G
Sbjct: 36  YITSDDEVYAFGLNCSNCLGTGDSQCTIVPKKVDILSGRKVVSLSYGSGPHILLA-TEDG 94

Query: 289 VVYSFGSGSNFCLGHGEQHDELQPRAIQT--FRRKGIHVVRVSAGDEHVVALDSSGYVYT 346
            ++++G      LG+G  +  + P  +      RK   V  V+ G  H +AL  SG VY 
Sbjct: 95  ELFAWGHNGYSQLGNGTTNQGVAPVLVSATLLNRK---VTEVACGSHHSMALTDSGEVYA 151

Query: 347 WGKGYCGALGHGDEIDKTLPEPLSS-LKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFG 405
           WG   CG +G G   ++  P  +SS L++ +AV +   +  +  +VD G VYG+G+ G G
Sbjct: 152 WGYNNCGQVGSGSTANQPTPRRVSSCLQNRVAVSIVCGQTSSLAVVDNGEVYGWGYNGNG 211

Query: 406 SLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHD 465
            LG  + G     L P  L +L+   V Q+ +G  H++ +TD G L+ +G N   QLG  
Sbjct: 212 QLGLGNNG---NQLTPCRLVALQGLCVQQVVSGYAHSLALTDEGLLYAWGANTYGQLGTG 268

Query: 466 TLRGCLEPTEIFIQE 480
                L P +I  ++
Sbjct: 269 NKSNQLSPVQIMTEK 283



 Score = 99.0 bits (245), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 82/288 (28%), Positives = 133/288 (46%), Gaps = 9/288 (3%)

Query: 117 TTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQC-VSFTRINFPSAAHVVQVS-ASENH 174
           T+      + S+  V++ G +    LG G   +QC +   +++  S   VV +S  S  H
Sbjct: 29  TSANEAIYITSDDEVYAFGLNCSNCLGTGD--SQCTIVPKKVDILSGRKVVSLSYGSGPH 86

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEA-LKGVPCKQVTAGLNFTGFLTI 233
                + G++F  G N     G+  TN+ +  P LV A L      +V  G + +  LT 
Sbjct: 87  ILLATEDGELFAWGHNGYSQLGNGTTNQGV-APVLVSATLLNRKVTEVACGSHHSMALTD 145

Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
            G V+  G N  GQ+G G T ++PTP+ ++   +    V I  G +  LAV  NG VY +
Sbjct: 146 SGEVYAWGYNNCGQVGSGSTANQPTPRRVSSCLQNRVAVSIVCGQTSSLAVVDNGEVYGW 205

Query: 294 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 353
           G   N  LG G   ++L P  +     +G+ V +V +G  H +AL   G +Y WG    G
Sbjct: 206 GYNGNGQLGLGNNGNQLTPCRLVAL--QGLCVQQVVSGYAHSLALTDEGLLYAWGANTYG 263

Query: 354 ALGHGDEIDKTLPEPLSSLKSHLA-VQVCARKRKTFVLVDTGSVYGFG 400
            LG G++ ++  P  + + K  +  +  C     +     +G VY +G
Sbjct: 264 QLGTGNKSNQLSPVQIMTEKERIVEIAACHSTHTSAAKTQSGQVYMWG 311



 Score = 47.4 bits (111), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 36/156 (23%), Positives = 74/156 (47%), Gaps = 9/156 (5%)

Query: 310 LQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPL 369
           + P+ + T R+   +V   SA +   + + S   VY +G      LG GD     +P+ +
Sbjct: 13  MSPQELSTIRKA--YVFGTSANE--AIYITSDDEVYAFGLNCSNCLGTGDSQCTIVPKKV 68

Query: 370 SSLKSHLAVQVCARKRKTFVLV-DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILD-SL 427
             L     V +        +L  + G ++ +G  G+  LG    G +++ + P ++  +L
Sbjct: 69  DILSGRKVVSLSYGSGPHILLATEDGELFAWGHNGYSQLG---NGTTNQGVAPVLVSATL 125

Query: 428 RAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 463
               V++++ G +H++ +TD G ++ +G N   Q+G
Sbjct: 126 LNRKVTEVACGSHHSMALTDSGEVYAWGYNNCGQVG 161


>gi|260814720|ref|XP_002602062.1| hypothetical protein BRAFLDRAFT_94436 [Branchiostoma floridae]
 gi|229287367|gb|EEN58074.1| hypothetical protein BRAFLDRAFT_94436 [Branchiostoma floridae]
          Length = 3971

 Score =  112 bits (279), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 92/326 (28%), Positives = 157/326 (48%), Gaps = 13/326 (3%)

Query: 115  QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHG--PETTQCVSFTRINFPSAAHVVQVSAS 171
            QI  G+  T +I +N +V +CG    G LG G   +  Q    + +       +V    S
Sbjct: 3217 QIICGQNCTFVIQANGTVQACGEGSYGRLGQGNSDDLHQLTIISALQGFVVTQLVTSCGS 3276

Query: 172  ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
            + H+  + +SG+VF+ GD      GH +++R   RPR +EAL+G    Q+  G   +  +
Sbjct: 3277 DGHSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEIIQMACGFKHSAVV 3335

Query: 232  TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLAVTGNG-V 289
            +  G + T G+  +G+LG G+T ++  P+ +  LE  G +V Q+  G ++ LAV+ +G  
Sbjct: 3336 SADGKLFTFGNGDYGRLGLGNTSNKKIPERVTALE--GQMVGQVGCGLNHTLAVSADGNT 3393

Query: 290  VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 349
            V+SFG G    LG G    +  P+ +      GI V +V  G +  VAL   G V+T+G+
Sbjct: 3394 VWSFGDGDYGKLGLGNSTAKSTPQRVDPL--CGIGVKKVCCGTQFSVALTKDGRVFTFGQ 3451

Query: 350  GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGF 409
                        +   P+ + +L++     V      +  L  TG V+ +G  G G LG 
Sbjct: 3452 ERLIGQPESRSRNHNRPQQVPALEAFFVEDVVVGAEHSLALTSTGEVWAWGSNGDGQLGI 3511

Query: 410  PDRGVSDKVLRPRILDSLRAHHVSQI 435
               G ++    P ++ +L+  +V Q+
Sbjct: 3512 ---GDTNARREPCLVTALQGKNVRQV 3534



 Score = 95.9 bits (237), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 84/309 (27%), Positives = 148/309 (47%), Gaps = 13/309 (4%)

Query: 160  PSAAHVVQVSASENHAAFVLQS-GQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPC 218
            PS +   Q+   +N   FV+Q+ G V  CG+ S    G  +++  + +  ++ AL+G   
Sbjct: 3210 PSFSQAQQIICGQN-CTFVIQANGTVQACGEGSYGRLGQGNSDD-LHQLTIISALQGFVV 3267

Query: 219  KQVTAGLNFTGF---LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA 275
             Q+       G    LT  G V + G   +G+LGHG++  +  P+ I  L+    ++Q+A
Sbjct: 3268 TQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQG-EEIIQMA 3326

Query: 276  AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHV 335
             G  +   V+ +G +++FG+G    LG G   ++  P  +     +G  V +V  G  H 
Sbjct: 3327 CGFKHSAVVSADGKLFTFGNGDYGRLGLGNTSNKKIPERVTAL--EGQMVGQVGCGLNHT 3384

Query: 336  VALDSSG-YVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 394
            +A+ + G  V+++G G  G LG G+   K+ P+ +  L      +VC   + +  L   G
Sbjct: 3385 LAVSADGNTVWSFGDGDYGKLGLGNSTAKSTPQRVDPLCGIGVKKVCCGTQFSVALTKDG 3444

Query: 395  SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 454
             V+ FG      +G P+   S    RP+ + +L A  V  +  G  H++ +T  G ++ +
Sbjct: 3445 RVFTFGQERL--IGQPE-SRSRNHNRPQQVPALEAFFVEDVVVGAEHSLALTSTGEVWAW 3501

Query: 455  GDNERAQLG 463
            G N   QLG
Sbjct: 3502 GSNGDGQLG 3510



 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 70/233 (30%), Positives = 107/233 (45%), Gaps = 11/233 (4%)

Query: 234  RGHVHTCGSNTHGQLGH-GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
            R   +  G   HGQL   G +L  PT   + P        QI  G +    +  NG V +
Sbjct: 3182 RCEAYMWGGGRHGQLAETGRSLLTPT---VTP--SFSQAQQIICGQNCTFVIQANGTVQA 3236

Query: 293  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG-DEHVVALDSSGYVYTWGKGY 351
             G GS   LG G   D  Q   I   +   +  +  S G D H +AL  SG V++WG G 
Sbjct: 3237 CGEGSYGRLGQGNSDDLHQLTIISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGD 3296

Query: 352  CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 411
             G LGHG+   +  P  + +L+    +Q+    + + V+   G ++ FG   +G LG  +
Sbjct: 3297 YGKLGHGNSDRQRRPRQIEALQGEEIIQMACGFKHSAVVSADGKLFTFGNGDYGRLGLGN 3356

Query: 412  RGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGR-LFGFGDNERAQLG 463
               S+K + P  + +L    V Q+  GL HT+ V+  G  ++ FGD +  +LG
Sbjct: 3357 --TSNKKI-PERVTALEGQMVGQVGCGLNHTLAVSADGNTVWSFGDGDYGKLG 3406



 Score = 75.1 bits (183), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 81/298 (27%), Positives = 127/298 (42%), Gaps = 43/298 (14%)

Query: 122  HTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
            H++ ++ S  VFS G    G LGHG    Q     +I       ++Q++    H+A V  
Sbjct: 3279 HSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEIIQMACGFKHSAVVSA 3337

Query: 181  SGQVFTCGDNSSFCCGHRDT-NRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH-VH 238
             G++FT G+      G  +T N+ I  P  V AL+G    QV  GLN T  ++  G+ V 
Sbjct: 3338 DGKLFTFGNGDYGRLGLGNTSNKKI--PERVTALEGQMVGQVGCGLNHTLAVSADGNTVW 3395

Query: 239  TCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
            + G   +G+LG G++  + TP+ + PL  +G V ++  G  + +A+T +G V++FG    
Sbjct: 3396 SFGDGDYGKLGLGNSTAKSTPQRVDPLCGIG-VKKVCCGTQFSVALTKDGRVFTFGQ--E 3452

Query: 299  FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY------- 351
              +G  E       R  Q    +   V  V  G EH +AL S+G V+ WG          
Sbjct: 3453 RLIGQPESRSRNHNRPQQVPALEAFFVEDVVVGAEHSLALTSTGEVWAWGSNGDGQLGIG 3512

Query: 352  ---------------------------CGALGHGDEIDKTLPEPLSSLKSHLAVQVCA 382
                                        G LG GD   +  P  ++ L+     Q+ A
Sbjct: 3513 DTNARREPCLVTALQGKNVRQVWGSNGDGQLGIGDTNARREPCLVTDLQGKNVRQISA 3570



 Score = 49.7 bits (117), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 42/148 (28%), Positives = 69/148 (46%), Gaps = 9/148 (6%)

Query: 344  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 403
             Y WG G  G L    E  ++L  P  +     A Q+   +  TFV+   G+V   G   
Sbjct: 3185 AYMWGGGRHGQLA---ETGRSLLTPTVTPSFSQAQQIICGQNCTFVIQANGTVQACGEGS 3241

Query: 404  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLY---HTVVVTDRGRLFGFGDNERA 460
            +G LG   +G SD + +  I+ +L+   V+Q+ T      H++ +T+ G +F +GD +  
Sbjct: 3242 YGRLG---QGNSDDLHQLTIISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYG 3298

Query: 461  QLGHDTLRGCLEPTEIFIQEMEEDTGLA 488
            +LGH        P +I   + EE   +A
Sbjct: 3299 KLGHGNSDRQRRPRQIEALQGEEIIQMA 3326


>gi|357613847|gb|EHJ68745.1| hypothetical protein KGM_02265 [Danaus plexippus]
          Length = 1039

 Score =  111 bits (278), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 91/321 (28%), Positives = 148/321 (46%), Gaps = 11/321 (3%)

Query: 159 FPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPC 218
           +  ++H+ Q+SA E H  ++  +G ++TCG N     G +  +     P LV+  KG   
Sbjct: 31  WKESSHIQQISAGEFHTLYLSNNGHLYTCGSNEVGQLGRQTNSADGTSPVLVDTFKGCTL 90

Query: 219 KQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAG 277
             +  GL  +  L   G   + GS++ GQLG    +  +  PK I  L    +V+Q+A G
Sbjct: 91  STIACGLQHSMALDEWGQPFSWGSDSMGQLGSNLGSHAQDKPKIIKTL-ATKNVIQVACG 149

Query: 278 PSYMLAVTGNGVVYSFGSGSNFCLGHGEQ-HDELQPRAIQTFRRKGIHVVRVSAGDEHVV 336
             + + +T NG +Y++G+ S    G G + + E  P+A+ +    GI +  ++ G  H  
Sbjct: 150 SYHTVVLTNNGDLYAWGANSYGQCGLGNRSNKETTPQALSSIL--GIPIALIACGSNHTF 207

Query: 337 ALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGS 395
           AL  SG V+ WGK   G LG  D   +  P  L +L++     + C      F+ +D G 
Sbjct: 208 ALSQSGAVFGWGKNSHGQLGLQDRESRCYPTHLKTLRNVKVCHISCGEDFTAFLTLD-GG 266

Query: 396 VYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFG 455
           V+  G   +G  G    G +   L PR +  L    V+Q++ G  H +      R+   G
Sbjct: 267 VFTCGAGEYGQTG---HGNTKDELVPRKVMELMGSTVTQVACGRRHMLCRVGE-RILACG 322

Query: 456 DNERAQLGHDTLRGCLEPTEI 476
              R QLG   +   L PT +
Sbjct: 323 YGARGQLGCPHMAFALVPTPV 343



 Score =  102 bits (253), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 87/333 (26%), Positives = 154/333 (46%), Gaps = 14/333 (4%)

Query: 81  ELLNRCNGNWKRVLR-FLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSS-VFSCGSSL 138
           EL   C GN   V++  L   + SS I        QI+ G +HTL +SN+  +++CGS+ 
Sbjct: 11  ELCIECPGNLDLVIKPTLSKWKESSHI-------QQISAGEFHTLYLSNNGHLYTCGSNE 63

Query: 139 CGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHR 198
            G LG    +    S   ++      +  ++    H+  + + GQ F+ G +S    G  
Sbjct: 64  VGQLGRQTNSADGTSPVLVDTFKGCTLSTIACGLQHSMALDEWGQPFSWGSDSMGQLGSN 123

Query: 199 DTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRP- 257
             +    +P++++ L      QV  G   T  LT  G ++  G+N++GQ G G+  ++  
Sbjct: 124 LGSHAQDKPKIIKTLATKNVIQVACGSYHTVVLTNNGDLYAWGANSYGQCGLGNRSNKET 183

Query: 258 TPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQT 317
           TP++++ +  +  +  IA G ++  A++ +G V+ +G  S+  LG  ++     P  ++T
Sbjct: 184 TPQALSSILGI-PIALIACGSNHTFALSQSGAVFGWGKNSHGQLGLQDRESRCYPTHLKT 242

Query: 318 FRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLA 377
            R   + V  +S G++    L   G V+T G G  G  GHG+  D+ +P  +  L     
Sbjct: 243 LR--NVKVCHISCGEDFTAFLTLDGGVFTCGAGEYGQTGHGNTKDELVPRKVMELMGSTV 300

Query: 378 VQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFP 410
            QV   +R     V    +   G+   G LG P
Sbjct: 301 TQVACGRRHMLCRVGE-RILACGYGARGQLGCP 332



 Score = 43.5 bits (101), Expect = 0.27,   Method: Compositional matrix adjust.
 Identities = 23/71 (32%), Positives = 35/71 (49%), Gaps = 13/71 (18%)

Query: 413 GVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH-------- 464
           G  D V++P +     + H+ QIS G +HT+ +++ G L+  G NE  QLG         
Sbjct: 18  GNLDLVIKPTLSKWKESSHIQQISAGEFHTLYLSNNGHLYTCGSNEVGQLGRQTNSADGT 77

Query: 465 -----DTLRGC 470
                DT +GC
Sbjct: 78  SPVLVDTFKGC 88


>gi|17510153|ref|NP_490834.1| Protein HERC-1 [Caenorhabditis elegans]
 gi|351051254|emb|CCD73459.1| Protein HERC-1 [Caenorhabditis elegans]
          Length = 1019

 Score =  111 bits (278), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 85/302 (28%), Positives = 139/302 (46%), Gaps = 18/302 (5%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V  V+  E H  F+ + G++++ G N     G        F    V         Q++AG
Sbjct: 43  VTSVTCGEQHTVFLTKDGKMWSVGSNMDGQLGRGSRTEGSFSIYPVSWTSSAKIIQISAG 102

Query: 225 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLD-RPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
            + T  +T  G V   GSN HGQLG       + TP+ +   +E+  +VQ+A+G ++ +A
Sbjct: 103 RSHTVSVTDDGRVFAWGSNEHGQLGMESKFTWQGTPRRV---QEINDIVQVASGSNHCIA 159

Query: 284 VTGNGVVYSFGSGSN-FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
           +   G V+ +G  ++  C+   E  ++L           G+ +VRV AG  H +AL +SG
Sbjct: 160 LDEGGRVFVWGEQADGRCIHRPEPVEQL----------SGVPIVRVLAGARHCLALSASG 209

Query: 343 YVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWM 402
            V+TWG+   G LG  D   +T  + +  +     V+       T +L   G  + FG  
Sbjct: 210 AVFTWGQNNSGELGIDDLRPQTSVQHVHQMDGLGVVEAACGDNHTVLLTHCGRTFSFGSD 269

Query: 403 GFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQL 462
             G  GF  +   +K   P  +  L   HV++I+ G  HT+ +  +G  + FG N   QL
Sbjct: 270 ALGQCGFGKK--VEKRTNPTAVSDLIGSHVTRIAAGACHTIAIC-KGAPYPFGLNSSGQL 326

Query: 463 GH 464
           G+
Sbjct: 327 GN 328



 Score = 99.8 bits (247), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 96/345 (27%), Positives = 159/345 (46%), Gaps = 34/345 (9%)

Query: 116 ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           +T G  HT+ ++ +  ++S GS++ G LG G  T    S   +++ S+A ++Q+SA  +H
Sbjct: 46  VTCGEQHTVFLTKDGKMWSVGSNMDGQLGRGSRTEGSFSIYPVSWTSSAKIIQISAGRSH 105

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 234
              V   G+VF  G N     G          PR V+ +  +   QV +G N    L   
Sbjct: 106 TVSVTDDGRVFAWGSNEHGQLGMESKFTWQGTPRRVQEINDI--VQVASGSNHCIALDEG 163

Query: 235 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSV--VQIAAGPSYMLAVTGNGVVYS 292
           G V   G    G+  H     RP      P+E++  V  V++ AG  + LA++ +G V++
Sbjct: 164 GRVFVWGEQADGRCIH-----RP-----EPVEQLSGVPIVRVLAGARHCLALSASGAVFT 213

Query: 293 FGSGSNFCLGHGEQHDELQPR-AIQ-TFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKG 350
           +G  ++  LG     D+L+P+ ++Q   +  G+ VV  + GD H V L   G  +++G  
Sbjct: 214 WGQNNSGELG----IDDLRPQTSVQHVHQMDGLGVVEAACGDNHTVLLTHCGRTFSFGSD 269

Query: 351 YCGALGHGDEIDK-TLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGF 409
             G  G G +++K T P  +S L      ++ A    T  +   G+ Y FG    G LG 
Sbjct: 270 ALGQCGFGKKVEKRTNPTAVSDLIGSHVTRIAAGACHTIAIC-KGAPYPFGLNSSGQLG- 327

Query: 410 PDRGVSDKVL---RPRILDSLRAHHVSQISTGLYHTVVVTDRGRL 451
                + K++    PR  D L   HV+ +  G + T  V   G +
Sbjct: 328 -----NGKIMTQSTPRKTDEL--DHVTGVFAGYHQTFFVRSSGTI 365



 Score = 98.6 bits (244), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 86/290 (29%), Positives = 142/290 (48%), Gaps = 18/290 (6%)

Query: 109 TSAGNMQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ 167
           +SA  +QI+ GR HT+ +++   VF+ GS+  G LG   + T   +  R+       +VQ
Sbjct: 92  SSAKIIQISAGRSHTVSVTDDGRVFAWGSNEHGQLGMESKFTWQGTPRRVQ--EINDIVQ 149

Query: 168 VSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF 227
           V++  NH   + + G+VF  G+ +   C H        RP  VE L GVP  +V AG   
Sbjct: 150 VASGSNHCIALDEGGRVFVWGEQADGRCIH--------RPEPVEQLSGVPIVRVLAGARH 201

Query: 228 TGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN 287
              L+  G V T G N  G+LG  D   + + + +  ++ +G VV+ A G ++ + +T  
Sbjct: 202 CLALSASGAVFTWGQNNSGELGIDDLRPQTSVQHVHQMDGLG-VVEAACGDNHTVLLTHC 260

Query: 288 GVVYSFGSGSNFCLGHGEQHDE-LQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYT 346
           G  +SFGS +    G G++ ++   P A+      G HV R++AG  H +A+   G  Y 
Sbjct: 261 GRTFSFGSDALGQCGFGKKVEKRTNPTAVSDL--IGSHVTRIAAGACHTIAI-CKGAPYP 317

Query: 347 WGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSV 396
           +G    G LG+G  + ++ P     L       V A   +TF +  +G++
Sbjct: 318 FGLNSSGQLGNGKIMTQSTPRKTDELDH--VTGVFAGYHQTFFVRSSGTI 365


>gi|26353276|dbj|BAC40268.1| unnamed protein product [Mus musculus]
          Length = 531

 Score =  111 bits (278), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 75/254 (29%), Positives = 126/254 (49%), Gaps = 9/254 (3%)

Query: 230 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGSVVQIAAGPSYMLAVTGN 287
           ++T    V   G N    LG GD      PK +  L  +++ S+    +GP ++L  T +
Sbjct: 36  YVTDNDEVFVFGLNYSNCLGTGDNQSTLVPKKLEALCGKKIKSL-SYGSGP-HVLLTTED 93

Query: 288 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 347
           GVVY++G      LG+G  +  + P  + T       V+ V+ G  H +AL + G ++ W
Sbjct: 94  GVVYAWGHNGYSQLGNGTTNQGIAPVQVCT-NLLIKQVIEVACGSHHSMALAADGELFAW 152

Query: 348 GKGYCGALGHGDEIDKTLPEPLSS-LKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGS 406
           G   CG +G G   ++  P  +++ L +   V +   +  +  ++D+G VYG+G+ G G 
Sbjct: 153 GYNNCGQVGSGSTANQPTPRKITNCLHTKRVVNIACGQTSSMAVLDSGEVYGWGYNGNGQ 212

Query: 407 LGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDT 466
           LG  + G     L P  + +L    V+QI  G  HT+ +TD G L+ +G N   QLG  +
Sbjct: 213 LGLGNNG---NQLTPVRVAALHGMCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGS 269

Query: 467 LRGCLEPTEIFIQE 480
               L PT+I +++
Sbjct: 270 KNNLLSPTQIMVEK 283



 Score = 93.2 bits (230), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 72/252 (28%), Positives = 116/252 (46%), Gaps = 6/252 (2%)

Query: 171 SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
           S N A +V  + +VF  G N S C G  D N+    P+ +EAL G   K ++ G      
Sbjct: 30  SANEAIYVTDNDEVFVFGLNYSNCLGTGD-NQSTLVPKKLEALCGKKIKSLSYGSGPHVL 88

Query: 231 LTIR-GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 289
           LT   G V+  G N + QLG+G T     P  +     +  V+++A G  + +A+  +G 
Sbjct: 89  LTTEDGVVYAWGHNGYSQLGNGTTNQGIAPVQVCTNLLIKQVIEVACGSHHSMALAADGE 148

Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 349
           ++++G  +   +G G   ++  PR I         VV ++ G    +A+  SG VY WG 
Sbjct: 149 LFAWGYNNCGQVGSGSTANQPTPRKITNCLHTK-RVVNIACGQTSSMAVLDSGEVYGWGY 207

Query: 350 GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGF 409
              G LG G+  ++  P  +++L      Q+      T  L D G +Y +G   +G LG 
Sbjct: 208 NGNGQLGLGNNGNQLTPVRVAALHGMCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLG- 266

Query: 410 PDRGVSDKVLRP 421
              G  + +L P
Sbjct: 267 --TGSKNNLLSP 276



 Score = 83.2 bits (204), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 74/286 (25%), Positives = 115/286 (40%), Gaps = 5/286 (1%)

Query: 117 TTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS-ASENHA 175
           T+      +  N  VF  G +    LG G   +  V   ++       +  +S  S  H 
Sbjct: 29  TSANEAIYVTDNDEVFVFGLNYSNCLGTGDNQSTLVP-KKLEALCGKKIKSLSYGSGPHV 87

Query: 176 AFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRG 235
               + G V+  G N     G+  TN+ I   ++   L      +V  G + +  L   G
Sbjct: 88  LLTTEDGVVYAWGHNGYSQLGNGTTNQGIAPVQVCTNLLIKQVIEVACGSHHSMALAADG 147

Query: 236 HVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 295
            +   G N  GQ+G G T ++PTP+ I        VV IA G +  +AV  +G VY +G 
Sbjct: 148 ELFAWGYNNCGQVGSGSTANQPTPRKITNCLHTKRVVNIACGQTSSMAVLDSGEVYGWGY 207

Query: 296 GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGAL 355
             N  LG G   ++L P  +      G+ V ++  G  H +AL   G +Y WG    G L
Sbjct: 208 NGNGQLGLGNNGNQLTPVRVAALH--GMCVNQIVCGYAHTLALTDEGLLYAWGANTYGQL 265

Query: 356 GHGDEIDKTLPEPLSSLKSH-LAVQVCARKRKTFVLVDTGSVYGFG 400
           G G + +   P  +   K   + +  C     +      G VY +G
Sbjct: 266 GTGSKNNLLSPTQIMVEKERVIEIAACHSTHTSAAKTQGGHVYMWG 311



 Score = 62.8 bits (151), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 55/184 (29%), Positives = 86/184 (46%), Gaps = 6/184 (3%)

Query: 114 MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +++  G +H++ L ++  +F+ G + CG +G G    Q       N      VV ++  +
Sbjct: 131 IEVACGSHHSMALAADGELFAWGYNNCGQVGSGSTANQPTPRKITNCLHTKRVVNIACGQ 190

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
             +  VL SG+V+  G N +   G    N     P  V AL G+   Q+  G   T  LT
Sbjct: 191 TSSMAVLDSGEVYGWGYNGNGQLG-LGNNGNQLTPVRVAALHGMCVNQIVCGYAHTLALT 249

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPS--YMLAVTGNGVV 290
             G ++  G+NT+GQLG G   +  +P  I  + E   V++IAA  S     A T  G V
Sbjct: 250 DEGLLYAWGANTYGQLGTGSKNNLLSPTQI--MVEKERVIEIAACHSTHTSAAKTQGGHV 307

Query: 291 YSFG 294
           Y +G
Sbjct: 308 YMWG 311


>gi|326664251|ref|XP_688463.5| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 [Danio rerio]
          Length = 992

 Score =  111 bits (278), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 68/207 (32%), Positives = 111/207 (53%), Gaps = 4/207 (1%)

Query: 164 HVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTA 223
            V+Q++  + H+  +   GQ+F  G+N+    G R        PR +++L G+P  Q++A
Sbjct: 119 QVIQIACGDQHSMALTNDGQLFVWGENALGQLGLRKEQAGTQSPRHLQSLCGIPVAQISA 178

Query: 224 GLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
           G N +  L++ G V   G N+ GQLG GDT DR  P  +  L+    +V I+ G  +  A
Sbjct: 179 GGNHSFVLSLSGVVFGWGGNSAGQLGLGDTTDRFVPTVVNSLKR-KKIVSISCGGEHTAA 237

Query: 284 VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEH-VVALDSSG 342
           +   G V++FGSG    LGH    DE  PR +      G  V +V+ G  H +V+  S  
Sbjct: 238 LAKGGTVFTFGSGGFGQLGHNSFKDEHHPRLVAELW--GSKVSQVTCGRNHTLVSTASPK 295

Query: 343 YVYTWGKGYCGALGHGDEIDKTLPEPL 369
            +Y++G G  G LG+G+++ +++P P+
Sbjct: 296 LIYSFGCGMQGQLGNGEQVKQSVPLPV 322



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 74/216 (34%), Positives = 106/216 (49%), Gaps = 13/216 (6%)

Query: 254 LDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLG-HGEQHDELQP 312
           +D+ T  S     E   V+QIA G  + +A+T +G ++ +G  +   LG   EQ     P
Sbjct: 103 MDKSTECSPLKGLENRQVIQIACGDQHSMALTNDGQLFVWGENALGQLGLRKEQAGTQSP 162

Query: 313 RAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSL 372
           R +Q+    GI V ++SAG  H   L  SG V+ WG    G LG GD  D+ +P  ++SL
Sbjct: 163 RHLQSL--CGIPVAQISAGGNHSFVLSLSGVVFGWGGNSAGQLGLGDTTDRFVPTVVNSL 220

Query: 373 KSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLG---FPDRGVSDKVLRPRILDSLRA 429
           K    V +      T  L   G+V+ FG  GFG LG   F D         PR++  L  
Sbjct: 221 KRKKIVSISCGGEHTAALAKGGTVFTFGSGGFGQLGHNSFKDEH------HPRLVAELWG 274

Query: 430 HHVSQISTGLYHTVVVTDRGRL-FGFGDNERAQLGH 464
             VSQ++ G  HT+V T   +L + FG   + QLG+
Sbjct: 275 SKVSQVTCGRNHTLVSTASPKLIYSFGCGMQGQLGN 310



 Score = 77.4 bits (189), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 74/230 (32%), Positives = 105/230 (45%), Gaps = 8/230 (3%)

Query: 114 MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +QI  G  H++ ++N   +F  G +  G LG   E     S   +       V Q+SA  
Sbjct: 121 IQIACGDQHSMALTNDGQLFVWGENALGQLGLRKEQAGTQSPRHLQSLCGIPVAQISAGG 180

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
           NH+  +  SG VF  G NS+   G  DT    F P +V +LK      ++ G   T  L 
Sbjct: 181 NHSFVLSLSGVVFGWGGNSAGQLGLGDTTDR-FVPTVVNSLKRKKIVSISCGGEHTAALA 239

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLAVTGN-GVV 290
             G V T GS   GQLGH    D   P+ +A L   GS V Q+  G ++ L  T +  ++
Sbjct: 240 KGGTVFTFGSGGFGQLGHNSFKDEHHPRLVAEL--WGSKVSQVTCGRNHTLVSTASPKLI 297

Query: 291 YSFGSGSNFCLGHGEQHDELQPRAIQ--TFRRKGIHVVRVSAGDEHVVAL 338
           YSFG G    LG+GEQ  +  P  +   T       + ++ AG+ H  AL
Sbjct: 298 YSFGCGMQGQLGNGEQVKQSVPLPVDQPTEYNDEYTIQKLVAGENHSFAL 347



 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 48/146 (32%), Positives = 76/146 (52%), Gaps = 4/146 (2%)

Query: 324 HVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTL-PEPLSSLKSHLAVQVCA 382
            V++++ GD+H +AL + G ++ WG+   G LG   E   T  P  L SL      Q+ A
Sbjct: 119 QVIQIACGDQHSMALTNDGQLFVWGENALGQLGLRKEQAGTQSPRHLQSLCGIPVAQISA 178

Query: 383 RKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHT 442
               +FVL  +G V+G+G    G LG  D   +D+ + P +++SL+   +  IS G  HT
Sbjct: 179 GGNHSFVLSLSGVVFGWGGNSAGQLGLGD--TTDRFV-PTVVNSLKRKKIVSISCGGEHT 235

Query: 443 VVVTDRGRLFGFGDNERAQLGHDTLR 468
             +   G +F FG     QLGH++ +
Sbjct: 236 AALAKGGTVFTFGSGGFGQLGHNSFK 261


>gi|242054133|ref|XP_002456212.1| hypothetical protein SORBIDRAFT_03g032200 [Sorghum bicolor]
 gi|241928187|gb|EES01332.1| hypothetical protein SORBIDRAFT_03g032200 [Sorghum bicolor]
          Length = 1056

 Score =  111 bits (278), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 91/323 (28%), Positives = 141/323 (43%), Gaps = 20/323 (6%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V Q+     H A   + G+VFT G+      GH  T+  I RP+LVE++       ++ G
Sbjct: 259 VNQIVCGSRHIALTTRQGEVFTWGEELGGRLGH-GTDTDISRPKLVESISVTIVDFISCG 317

Query: 225 LNFTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSYM 281
              T  ++  G +   G  ++  G LG+        PK ++ PLE +  V+ +A G  + 
Sbjct: 318 EFHTCAISASGDLFNWGDGSYHAGLLGYDTGASHWLPKRVSGPLEGL-QVLFVACGSWHS 376

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS- 340
             +T  G +Y+FG G+   LGHG +     P+ ++     G   ++V+ G  H  A+   
Sbjct: 377 ALITSTGRLYTFGDGTFGALGHGNRESSAYPKEVEAL--NGFRTIKVACGVWHSAAIVEA 434

Query: 341 ---------SGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 391
                    S  +YTWG G    LG GD+  + +P  + +L  H   Q+   +  T  L 
Sbjct: 435 TVQTGMNMVSKKLYTWGDGDKNRLGQGDKEARLIPTCVQALLEHNFHQLACGQNMTVALA 494

Query: 392 DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRL 451
            +G VY  G    G LG P        L   + D L    V +IS G  H  V+T R  +
Sbjct: 495 TSGHVYTMGSSDNGQLGNPKSDGKQPCL---VKDKLAHELVEEISCGAAHVAVLTSRSEV 551

Query: 452 FGFGDNERAQLGHDTLRGCLEPT 474
           + +G     +LGH  L     PT
Sbjct: 552 YTWGMGANGRLGHGDLNDKKAPT 574



 Score = 99.8 bits (247), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 101/352 (28%), Positives = 149/352 (42%), Gaps = 36/352 (10%)

Query: 115 QITTGRYHTLLISNS-SVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHVV 166
           QI  G  H  L +    VF+ G  L G LGHG       P+  + +S T ++F       
Sbjct: 261 QIVCGSRHIALTTRQGEVFTWGEELGGRLGHGTDTDISRPKLVESISVTIVDF------- 313

Query: 167 QVSASENHAAFVLQSGQVFTCGDNSSFC--CGHRDTNRPIFRPRLVEA-LKGVPCKQVTA 223
            +S  E H   +  SG +F  GD S      G+ DT    + P+ V   L+G+    V  
Sbjct: 314 -ISCGEFHTCAISASGDLFNWGDGSYHAGLLGY-DTGASHWLPKRVSGPLEGLQVLFVAC 371

Query: 224 GLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
           G   +  +T  G ++T G  T G LGHG+      PK +  L      +++A G  +  A
Sbjct: 372 GSWHSALITSTGRLYTFGDGTFGALGHGNRESSAYPKEVEALNGF-RTIKVACGVWHSAA 430

Query: 284 V------TGNGVV----YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           +      TG  +V    Y++G G    LG G++   L P  +Q       H  +++ G  
Sbjct: 431 IVEATVQTGMNMVSKKLYTWGDGDKNRLGQGDKEARLIPTCVQALLEHNFH--QLACGQN 488

Query: 334 HVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDT 393
             VAL +SG+VYT G    G LG+     K        L   L  ++        VL   
Sbjct: 489 MTVALATSGHVYTMGSSDNGQLGNPKSDGKQPCLVKDKLAHELVEEISCGAAHVAVLTSR 548

Query: 394 GSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVV 445
             VY +G    G LG  D  ++DK   P I+++L+  HV  IS G   T  +
Sbjct: 549 SEVYTWGMGANGRLGHGD--LNDKKA-PTIVEALKDRHVKSISCGSNFTTCI 597



 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 73/293 (24%), Positives = 132/293 (45%), Gaps = 16/293 (5%)

Query: 204 IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 263
           +  P+ +E+   +   Q+  G       T +G V T G    G+LGHG   D   PK + 
Sbjct: 245 VLIPKPLESDVVLDVNQIVCGSRHIALTTRQGEVFTWGEELGGRLGHGTDTDISRPKLVE 304

Query: 264 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC--LGHGEQHDELQPRAIQTFRRK 321
            +  V  V  I+ G  +  A++ +G ++++G GS     LG+        P+ + +   +
Sbjct: 305 SI-SVTIVDFISCGEFHTCAISASGDLFNWGDGSYHAGLLGYDTGASHWLPKRV-SGPLE 362

Query: 322 GIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVC 381
           G+ V+ V+ G  H   + S+G +YT+G G  GALGHG+      P+ + +L     ++V 
Sbjct: 363 GLQVLFVACGSWHSALITSTGRLYTFGDGTFGALGHGNRESSAYPKEVEALNGFRTIKVA 422

Query: 382 ARKRKTFVLVDTGSVYG--------FGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVS 433
                +  +V+     G        + W G G      +G  +  L P  + +L  H+  
Sbjct: 423 CGVWHSAAIVEATVQTGMNMVSKKLYTW-GDGDKNRLGQGDKEARLIPTCVQALLEHNFH 481

Query: 434 QISTGLYHTVVVTDRGRLFGFGDNERAQLGH---DTLRGCLEPTEIFIQEMEE 483
           Q++ G   TV +   G ++  G ++  QLG+   D  + CL   ++  + +EE
Sbjct: 482 QLACGQNMTVALATSGHVYTMGSSDNGQLGNPKSDGKQPCLVKDKLAHELVEE 534


>gi|408500311|ref|YP_006864230.1| putative regulator of chromosome condensation, RCC1 [Bifidobacterium
            asteroides PRL2011]
 gi|408465135|gb|AFU70664.1| putative regulator of chromosome condensation, RCC1 [Bifidobacterium
            asteroides PRL2011]
          Length = 1160

 Score =  111 bits (277), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 100/377 (26%), Positives = 168/377 (44%), Gaps = 24/377 (6%)

Query: 120  RYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHV----VQVSASENH 174
            R  TL + S+ + ++ G +  G LG G   TQ      +  P+ A      VQVSA +  
Sbjct: 676  RGFTLAVGSDGNAYAWGRNNYGQLGDG-TLTQRNKPVIVKKPAGASADFTYVQVSAGDEQ 734

Query: 175  AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLV----EALKGVPCKQVTAGLNFTGF 230
            +  V   G V+  G+N S   G+  +      P  V    +   G+   QV+AG   +  
Sbjct: 735  SLAVGSDGYVYAWGNNESGQLGNGSSGGYSTVPLRVIDPNDPRSGLTAVQVSAGYYHSLA 794

Query: 231  LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSV--VQIAAGPSYMLAVTGNG 288
            L  RG++   G N  G+LG+G+ ++   P       + G+V  +Q++ G  +  A+   G
Sbjct: 795  LDARGNIWAWGFNQFGELGNGNNINSAIPTLAQYPRDAGTVTAIQVSGGFHHTAAIDTKG 854

Query: 289  VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKG-IHVVRVSAGDEHVVALDSSGYVYTW 347
              +S+G      LG+G   D   P  +Q  R  G +  ++VSAG +H + +D+ G  + W
Sbjct: 855  NTWSWGWNWFGQLGNGNNIDSAIPVPVQYPRDAGTVRAIQVSAGADHSLIIDTKGNTWAW 914

Query: 348  GKGYCGALGHGDEIDKTLPEP-----LSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWM 402
            G    G LG+G       P P       +  +  A+QV A    +  +   G+ + +G  
Sbjct: 915  GWNQLGELGNGSSSADANPVPGMVKYPENAGTVTAIQVSAGGYHSLAIDKNGNAWAWGGN 974

Query: 403  GFGSLGFPDRGVSDKVLRPRILDSLR---AHHVSQISTGLYHTVVVTDRGRLFGFGDNER 459
              G LG    G + K   P ++   +   A    Q+S G YH++ +   G+ + +G N+ 
Sbjct: 975  DSGELGI---GTTSKSEIPALVQYPKNAGAVTTVQVSAGGYHSLGIDKEGKTWAWGYNQF 1031

Query: 460  AQLGHDTLRGCLEPTEI 476
             QLG+ T+     PT +
Sbjct: 1032 GQLGNGTISNSSIPTPV 1048



 Score = 92.8 bits (229), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 83/316 (26%), Positives = 146/316 (46%), Gaps = 25/316 (7%)

Query: 70   IYAGMSRNVQIELLNRCNGNWKRV-LRFLQSVEHSSDIVETSAGNMQITTGRYHTL-LIS 127
            +YA    N   +L N  +G +  V LR +   +  S +       +Q++ G YH+L L +
Sbjct: 744  VYA-WGNNESGQLGNGSSGGYSTVPLRVIDPNDPRSGLTA-----VQVSAGYYHSLALDA 797

Query: 128  NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVV---QVSASENHAAFVLQSGQV 184
              ++++ G +  G LG+G      +  T   +P  A  V   QVS   +H A +   G  
Sbjct: 798  RGNIWAWGFNQFGELGNGNNINSAIP-TLAQYPRDAGTVTAIQVSGGFHHTAAIDTKGNT 856

Query: 185  FTCGDNSSFCCGHRDT-----NRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 239
            ++ G N     G+ +        P+  PR    ++ +   QV+AG + +  +  +G+   
Sbjct: 857  WSWGWNWFGQLGNGNNIDSAIPVPVQYPRDAGTVRAI---QVSAGADHSLIIDTKGNTWA 913

Query: 240  CGSNTHGQLGHGDTLD--RPTPKSIAPLEEVGSV--VQIAAGPSYMLAVTGNGVVYSFGS 295
             G N  G+LG+G +     P P  +   E  G+V  +Q++AG  + LA+  NG  +++G 
Sbjct: 914  WGWNQLGELGNGSSSADANPVPGMVKYPENAGTVTAIQVSAGGYHSLAIDKNGNAWAWGG 973

Query: 296  GSNFCLGHGEQHDELQPRAIQTFRRKG-IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGA 354
              +  LG G       P  +Q  +  G +  V+VSAG  H + +D  G  + WG    G 
Sbjct: 974  NDSGELGIGTTSKSEIPALVQYPKNAGAVTTVQVSAGGYHSLGIDKEGKTWAWGYNQFGQ 1033

Query: 355  LGHGDEIDKTLPEPLS 370
            LG+G   + ++P P++
Sbjct: 1034 LGNGTISNSSIPTPVA 1049


>gi|114321834|ref|YP_743517.1| regulator of chromosome condensation, RCC1 [Alkalilimnicola
           ehrlichii MLHE-1]
 gi|114228228|gb|ABI58027.1| regulator of chromosome condensation, RCC1 [Alkalilimnicola
           ehrlichii MLHE-1]
          Length = 821

 Score =  111 bits (277), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 98/369 (26%), Positives = 162/369 (43%), Gaps = 22/369 (5%)

Query: 109 TSAGNMQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ 167
           T A     + G+Y T  + ++ S++  G +  G LG G    +      +     +    
Sbjct: 471 TEADWAAASAGQYQTQAVKADGSLWGWGRNHSGQLGLGDTDDRHAP---VQVGGDSDWTS 527

Query: 168 VSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF 227
           +S    H   V   G ++  G N +   G  DT+      R+           V+AG  +
Sbjct: 528 LSVGREHTLAVKADGTLWGWGQNYNGQLGLGDTDDRKTPERVGSDSD---WATVSAGTGY 584

Query: 228 TGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN 287
           T  +   G +   G N+HGQLG GDT +R  P  +A   +  +V   +AG  + LAV  +
Sbjct: 585 TLAVKDDGTLWAWGRNSHGQLGLGDTNNRDAPVQVASDNDWAAV---SAGSRHTLAVKND 641

Query: 288 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 347
           G ++++G  S+  LG G+  +   P  + +          VS G  H +A+ + G ++ W
Sbjct: 642 GTLWAWGRNSDGQLGLGDTDNRDVPEQVGSD----TDWAAVSTGSGHTLAVKTDGTLWAW 697

Query: 348 GKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSL 407
           G+   G LG GD  ++  PE +       AV   A  + T  + + G+++G+G   +G L
Sbjct: 698 GRNSDGQLGLGDTDERHAPEQVGGDSDWAAV--TAGWQHTLAIKNDGTLWGWGLNLYGQL 755

Query: 408 GFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTL 467
           G  D   +D    P  + S      + ++ G YHT+ V D G L  +G N   QLG  T 
Sbjct: 756 GLGD---TDGRHAPMQVGS--DSDWATVAAGRYHTLAVKDDGTLRAWGRNRFGQLGQRTY 810

Query: 468 RGCLEPTEI 476
           R   +P E+
Sbjct: 811 R-FDQPQEV 818



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 103/378 (27%), Positives = 171/378 (45%), Gaps = 34/378 (8%)

Query: 108 ETSAGNMQ---ITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPE---TTQCVSFTRINFP 160
           E   G M+   +T G YHTL + ++ ++ + G +  G LG G     T+   + T  ++ 
Sbjct: 417 EQVGGGMEWAAVTAGMYHTLGVKADGTLRAWGRNDFGELGLGVMVYITSPLQTVTEADWA 476

Query: 161 SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQ 220
           +A      SA +     V   G ++  G N S   G  DT+    R   V+         
Sbjct: 477 AA------SAGQYQTQAVKADGSLWGWGRNHSGQLGLGDTDD---RHAPVQVGGDSDWTS 527

Query: 221 VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 280
           ++ G   T  +   G +   G N +GQLG GDT DR TP+ +    +  +V   +AG  Y
Sbjct: 528 LSVGREHTLAVKADGTLWGWGQNYNGQLGLGDTDDRKTPERVGSDSDWATV---SAGTGY 584

Query: 281 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 340
            LAV  +G ++++G  S+  LG G+ ++   P  + +          VSAG  H +A+ +
Sbjct: 585 TLAVKDDGTLWAWGRNSHGQLGLGDTNNRDAPVQVASDN----DWAAVSAGSRHTLAVKN 640

Query: 341 SGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 400
            G ++ WG+   G LG GD  ++ +PE + S     AV   +    T  +   G+++ +G
Sbjct: 641 DGTLWAWGRNSDGQLGLGDTDNRDVPEQVGSDTDWAAVSTGS--GHTLAVKTDGTLWAWG 698

Query: 401 WMGFGSLGFPDRGVSDKVLRPRIL--DSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNE 458
               G LG  D   +D+   P  +  DS  A     ++ G  HT+ + + G L+G+G N 
Sbjct: 699 RNSDGQLGLGD---TDERHAPEQVGGDSDWA----AVTAGWQHTLAIKNDGTLWGWGLNL 751

Query: 459 RAQLGHDTLRGCLEPTEI 476
             QLG     G   P ++
Sbjct: 752 YGQLGLGDTDGRHAPMQV 769



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 98/365 (26%), Positives = 163/365 (44%), Gaps = 25/365 (6%)

Query: 102 HSSDIVETSAGNMQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFP 160
           H+ + V + +  + ++ GR+HTL L ++ ++++ G +  G LG G  T +       +  
Sbjct: 214 HAPEQVGSDSDWVAVSAGRHHTLALKADGTLWAWGRNYFGQLGLGGTTNRNAPEQVGSHS 273

Query: 161 SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQ 220
             A V+     + H+  V + G +++ G N+    G  DT   + R R  +         
Sbjct: 274 DWAGVI---GGDRHSLAVREDGTLWSWGQNNVGQLGLGDT---VERRRPEQVGNDSDWAT 327

Query: 221 VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 280
           V+AGL  T  +   G +   G N  GQLG GDT +R  P  +    +  +   + AG  Y
Sbjct: 328 VSAGLLHTLAVKNDGTLWAWGGNGFGQLGLGDTDNRDAPVQVGSDNDWAA---LNAGQRY 384

Query: 281 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 340
            LAV  +G ++S+G      LG G+  D   P  +      G+    V+AG  H + + +
Sbjct: 385 SLAVKNDGSLWSWGWNDFGELGLGDTDDRHAPEQVG----GGMEWAAVTAGMYHTLGVKA 440

Query: 341 SGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 400
            G +  WG+   G LG G  +   +  PL ++         A + +T  +   GS++G+G
Sbjct: 441 DGTLRAWGRNDFGELGLG--VMVYITSPLQTVTEADWAAASAGQYQTQAVKADGSLWGWG 498

Query: 401 WMGFGSLGFPDRGVSDKVLRPRIL--DSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNE 458
               G LG  D   +D    P  +  DS      + +S G  HT+ V   G L+G+G N 
Sbjct: 499 RNHSGQLGLGD---TDDRHAPVQVGGDS----DWTSLSVGREHTLAVKADGTLWGWGQNY 551

Query: 459 RAQLG 463
             QLG
Sbjct: 552 NGQLG 556



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 70/233 (30%), Positives = 106/233 (45%), Gaps = 14/233 (6%)

Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 290
           +   G +   G N  GQLG GDT  R TP  +    +  +V   +AG +Y LAV  +G +
Sbjct: 138 MKADGTLWAWGQNNVGQLGLGDTEKRDTPAQVGSDTDWAAV---SAGGAYTLAVKDDGTL 194

Query: 291 YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKG 350
           +++G      LG G+  D   P  + +        V VSAG  H +AL + G ++ WG+ 
Sbjct: 195 WAWGENYFGQLGLGDTDDRHAPEQVGSDS----DWVAVSAGRHHTLALKADGTLWAWGRN 250

Query: 351 YCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFP 410
           Y G LG G   ++  PE + S        V    R +  + + G+++ +G    G LG  
Sbjct: 251 YFGQLGLGGTTNRNAPEQVGSHSDWAG--VIGGDRHSLAVREDGTLWSWGQNNVGQLGL- 307

Query: 411 DRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 463
                D V R R          + +S GL HT+ V + G L+ +G N   QLG
Sbjct: 308 ----GDTVERRRPEQVGNDSDWATVSAGLLHTLAVKNDGTLWAWGGNGFGQLG 356



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 97/372 (26%), Positives = 156/372 (41%), Gaps = 32/372 (8%)

Query: 95  RFLQSVEHSSDIVETSAGNMQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVS 153
           R  + V + SD    SAG +       HTL + N  ++++ G +  G LG G    +   
Sbjct: 314 RRPEQVGNDSDWATVSAGLL-------HTLAVKNDGTLWAWGGNGFGQLGLGDTDNRDAP 366

Query: 154 FTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEAL 213
              +   S      ++A + ++  V   G +++ G N     G  DT+    R    +  
Sbjct: 367 ---VQVGSDNDWAALNAGQRYSLAVKNDGSLWSWGWNDFGELGLGDTDD---RHAPEQVG 420

Query: 214 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEV--GSV 271
            G+    VTAG+  T  +   G +   G N  G+LG G  +        +PL+ V     
Sbjct: 421 GGMEWAAVTAGMYHTLGVKADGTLRAWGRNDFGELGLGVMV-----YITSPLQTVTEADW 475

Query: 272 VQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG 331
              +AG     AV  +G ++ +G   +  LG G+  D   P  +            +S G
Sbjct: 476 AAASAGQYQTQAVKADGSLWGWGRNHSGQLGLGDTDDRHAPVQVGGDS----DWTSLSVG 531

Query: 332 DEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 391
            EH +A+ + G ++ WG+ Y G LG GD  D+  PE + S  S  A  V A    T  + 
Sbjct: 532 REHTLAVKADGTLWGWGQNYNGQLGLGDTDDRKTPERVGS-DSDWAT-VSAGTGYTLAVK 589

Query: 392 DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRL 451
           D G+++ +G    G LG  D    D  ++    +   A     +S G  HT+ V + G L
Sbjct: 590 DDGTLWAWGRNSHGQLGLGDTNNRDAPVQVASDNDWAA-----VSAGSRHTLAVKNDGTL 644

Query: 452 FGFGDNERAQLG 463
           + +G N   QLG
Sbjct: 645 WAWGRNSDGQLG 656



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 79/293 (26%), Positives = 133/293 (45%), Gaps = 23/293 (7%)

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
           H   +   G ++  G N+    G  DT +   R    +         V+AG  +T  +  
Sbjct: 134 HTLAMKADGTLWAWGQNNVGQLGLGDTEK---RDTPAQVGSDTDWAAVSAGGAYTLAVKD 190

Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS---VVQIAAGPSYMLAVTGNGVV 290
            G +   G N  GQLG GDT DR  P      E+VGS    V ++AG  + LA+  +G +
Sbjct: 191 DGTLWAWGENYFGQLGLGDTDDRHAP------EQVGSDSDWVAVSAGRHHTLALKADGTL 244

Query: 291 YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKG 350
           +++G      LG G   +   P  + +          V  GD H +A+   G +++WG+ 
Sbjct: 245 WAWGRNYFGQLGLGGTTNRNAPEQVGSHS----DWAGVIGGDRHSLAVREDGTLWSWGQN 300

Query: 351 YCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFP 410
             G LG GD +++  PE + +  S  A  V A    T  + + G+++ +G  GFG LG  
Sbjct: 301 NVGQLGLGDTVERRRPEQVGN-DSDWAT-VSAGLLHTLAVKNDGTLWAWGGNGFGQLGLG 358

Query: 411 DRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 463
           D   +D    P  + S   +  + ++ G  +++ V + G L+ +G N+  +LG
Sbjct: 359 D---TDNRDAPVQVGS--DNDWAALNAGQRYSLAVKNDGSLWSWGWNDFGELG 406



 Score = 53.1 bits (126), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 41/136 (30%), Positives = 66/136 (48%), Gaps = 7/136 (5%)

Query: 328 VSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKT 387
           ++AG  H +A+ + G ++ WG+   G LG GD   +  P  + S     A  V A    T
Sbjct: 128 LAAGGVHTLAMKADGTLWAWGQNNVGQLGLGDTEKRDTPAQVGSDTDWAA--VSAGGAYT 185

Query: 388 FVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTD 447
             + D G+++ +G   FG LG  D   +D    P  + S  +  V+ +S G +HT+ +  
Sbjct: 186 LAVKDDGTLWAWGENYFGQLGLGD---TDDRHAPEQVGS-DSDWVA-VSAGRHHTLALKA 240

Query: 448 RGRLFGFGDNERAQLG 463
            G L+ +G N   QLG
Sbjct: 241 DGTLWAWGRNYFGQLG 256


>gi|348688462|gb|EGZ28276.1| hypothetical protein PHYSODRAFT_476799 [Phytophthora sojae]
          Length = 1699

 Score =  111 bits (277), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 74/232 (31%), Positives = 116/232 (50%), Gaps = 8/232 (3%)

Query: 235 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 294
           G +++CG N++G+LG GD ++R    S++ L     + Q+ +G   +  +T  GVV + G
Sbjct: 328 GELYSCGQNSYGELGTGDDIERHQLTSVS-LCGWDDIRQVVSGNETLAVLTNEGVVLTCG 386

Query: 295 SGSNFCLGHGEQHDE--LQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 352
              +   G G   DE  +  R +Q  R + +  +  S G EH++AL  +G  Y+WG    
Sbjct: 387 LNKSGQCGQG-HFDERVMMLRPVQALRSQRVKFIAASNGCEHMIALTDTGLAYSWGYNDR 445

Query: 353 GALGHGDEIDKT-LPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 411
           G LGH +   K  +P+ + SLK             + V+ D G +Y FG    G LG   
Sbjct: 446 GQLGHENLATKIHVPKLIESLKDKKLGFASVSYHHSAVITDAGELYTFGMNDCGQLGLDH 505

Query: 412 RGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 463
              +     P+++ SL A  VS ++ GLYHT++ T  G LF  G N+  QLG
Sbjct: 506 ---TQHQSTPQLVKSLEATEVSMVACGLYHTIICTAAGELFTCGKNDYGQLG 554



 Score = 99.0 bits (245), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 88/290 (30%), Positives = 136/290 (46%), Gaps = 18/290 (6%)

Query: 181 SGQVFTCGDNSSFCCGHRDTNRPIFRPRL--VEALKGVPCKQVTAGLNFTGFLTIRGHVH 238
           SG++++CG NS    G   T   I R +L  V        +QV +G      LT  G V 
Sbjct: 327 SGELYSCGQNSY---GELGTGDDIERHQLTSVSLCGWDDIRQVVSGNETLAVLTNEGVVL 383

Query: 239 TCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS--VVQIAA--GPSYMLAVTGNGVVYSFG 294
           TCG N  GQ G G   +R     + P++ + S  V  IAA  G  +M+A+T  G+ YS+G
Sbjct: 384 TCGLNKSGQCGQGHFDERVM--MLRPVQALRSQRVKFIAASNGCEHMIALTDTGLAYSWG 441

Query: 295 SGSNFCLGHGEQHDELQ-PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 353
                 LGH     ++  P+ I++ + K +    VS    H   +  +G +YT+G   CG
Sbjct: 442 YNDRGQLGHENLATKIHVPKLIESLKDKKLGFASVSY--HHSAVITDAGELYTFGMNDCG 499

Query: 354 ALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRG 413
            LG      ++ P+ + SL++     V      T +    G ++  G   +G LG     
Sbjct: 500 QLGLDHTQHQSTPQLVKSLEATEVSMVACGLYHTIICTAAGELFTCGKNDYGQLGL---- 555

Query: 414 VSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 463
             ++ ++   L +L    VS ++ G YH+VVV+  GR F FG N+  QLG
Sbjct: 556 AHNRQIKLPTLVALPNEMVSFVACGYYHSVVVSTGGRAFSFGRNDYGQLG 605



 Score = 91.7 bits (226), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 94/382 (24%), Positives = 166/382 (43%), Gaps = 19/382 (4%)

Query: 109 TSAGNMQITTGRYHTL--------LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFP 160
           TSA N++++  +   L          ++  ++SCG +  G LG G +  +    T ++  
Sbjct: 300 TSAVNLEMSIAKLAALKEQPMYGKCEASGELYSCGQNSYGELGTGDDIERH-QLTSVSLC 358

Query: 161 SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQ 220
               + QV +     A +   G V TCG N S  CG    +  +   R V+AL+    K 
Sbjct: 359 GWDDIRQVVSGNETLAVLTNEGVVLTCGLNKSGQCGQGHFDERVMMLRPVQALRSQRVKF 418

Query: 221 VTA--GLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRP-TPKSIAPLEEVGSVVQIAAG 277
           + A  G      LT  G  ++ G N  GQLGH +   +   PK I  L++   +   +  
Sbjct: 419 IAASNGCEHMIALTDTGLAYSWGYNDRGQLGHENLATKIHVPKLIESLKD-KKLGFASVS 477

Query: 278 PSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
             +   +T  G +Y+FG      LG      +  P+ +++   +   V  V+ G  H + 
Sbjct: 478 YHHSAVITDAGELYTFGMNDCGQLGLDHTQHQSTPQLVKSL--EATEVSMVACGLYHTII 535

Query: 338 LDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVY 397
             ++G ++T GK   G LG        LP  L +L + +   V      + V+   G  +
Sbjct: 536 CTAAGELFTCGKNDYGQLGLAHNRQIKLPT-LVALPNEMVSFVACGYYHSVVVSTGGRAF 594

Query: 398 GFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDN 457
            FG   +G LG   + V   V  P ++       + + + G YHTV+++++G+++ FG N
Sbjct: 595 SFGRNDYGQLGIGSK-VHQNV--PNVVALSSNTRMVRATCGCYHTVLLSEQGQVYVFGRN 651

Query: 458 ERAQLGHDTLRGCLEPTEIFIQ 479
            + QLG+      L P  + ++
Sbjct: 652 NKGQLGNRGSADALLPVPLKVR 673



 Score = 82.0 bits (201), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 81/347 (23%), Positives = 146/347 (42%), Gaps = 11/347 (3%)

Query: 115 QITTGRYHTLLISNSSV-FSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE- 172
           Q+ +G     +++N  V  +CG +  G  G G    + +    +    +  V  ++AS  
Sbjct: 365 QVVSGNETLAVLTNEGVVLTCGLNKSGQCGQGHFDERVMMLRPVQALRSQRVKFIAASNG 424

Query: 173 -NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
             H   +  +G  ++ G N     GH +    I  P+L+E+LK       +   + +  +
Sbjct: 425 CEHMIALTDTGLAYSWGYNDRGQLGHENLATKIHVPKLIESLKDKKLGFASVSYHHSAVI 484

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
           T  G ++T G N  GQLG   T  + TP+ +  LE    V  +A G  + +  T  G ++
Sbjct: 485 TDAGELYTFGMNDCGQLGLDHTQHQSTPQLVKSLEAT-EVSMVACGLYHTIICTAAGELF 543

Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 351
           + G      LG         P  +         V  V+ G  H V + + G  +++G+  
Sbjct: 544 TCGKNDYGQLGLAHNRQIKLPTLVALPNE---MVSFVACGYYHSVVVSTGGRAFSFGRND 600

Query: 352 CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 411
            G LG G ++ + +P  ++   +   V+       T +L + G VY FG    G LG  +
Sbjct: 601 YGQLGIGSKVHQNVPNVVALSSNTRMVRATCGCYHTVLLSEQGQVYVFGRNNKGQLG--N 658

Query: 412 RGVSDKVLRP--RILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGD 456
           RG +D +L    ++     +     ++ G Y T ++ +R R    GD
Sbjct: 659 RGSADALLPVPLKVRPEKNSRRCVDVAAGFYTTSLIVERKRENDDGD 705



 Score = 70.1 bits (170), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 70/238 (29%), Positives = 107/238 (44%), Gaps = 23/238 (9%)

Query: 254 LDRPTPKSIAPLE-EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQP 312
           L +  P S   LE  +  +  +   P Y      +G +YS G  S   LG G   D+++ 
Sbjct: 294 LMKQPPTSAVNLEMSIAKLAALKEQPMYG-KCEASGELYSCGQNSYGELGTG---DDIER 349

Query: 313 RAIQTFRRKGIHVVR-VSAGDEHVVALDSSGYVYTWG---KGYCGALGHGDEIDKTLPEP 368
             + +    G   +R V +G+E +  L + G V T G    G CG  GH DE    L  P
Sbjct: 350 HQLTSVSLCGWDDIRQVVSGNETLAVLTNEGVVLTCGLNKSGQCGQ-GHFDERVMML-RP 407

Query: 369 LSSLKSHLAVQVCARK--RKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDS 426
           + +L+S     + A         L DTG  Y +G+   G LG     ++ K+  P++++S
Sbjct: 408 VQALRSQRVKFIAASNGCEHMIALTDTGLAYSWGYNDRGQLGH--ENLATKIHVPKLIES 465

Query: 427 LRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHD--------TLRGCLEPTEI 476
           L+   +   S   +H+ V+TD G L+ FG N+  QLG D         L   LE TE+
Sbjct: 466 LKDKKLGFASVSYHHSAVITDAGELYTFGMNDCGQLGLDHTQHQSTPQLVKSLEATEV 523


>gi|344281808|ref|XP_003412669.1| PREDICTED: RCC1 and BTB domain-containing protein 2 [Loxodonta
           africana]
          Length = 551

 Score =  111 bits (277), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 84/285 (29%), Positives = 127/285 (44%), Gaps = 5/285 (1%)

Query: 128 NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS-ASENHAAFVLQSGQVFT 186
           N+ +F  G++ CG LG G +    +   R++  S   +  +S  S  H       G+VFT
Sbjct: 64  NNEIFVLGTNCCGCLGLG-DVQSTIEPRRLDSLSGKKIACLSYGSGPHIVLATTEGEVFT 122

Query: 187 CGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHG 246
            G N+    G+  TN  +    +   L      +V  G   +  LT  G V   G N  G
Sbjct: 123 WGHNAYSQLGNGTTNHGLVPCYISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSG 182

Query: 247 QLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ 306
           Q+G G T ++P P+ +    +  +VV IA G    +AV   G VY +G   N  LG G  
Sbjct: 183 QVGSGSTANQPIPRRVTGCLQNKAVVNIACGQMCSMAVVDAGEVYVWGYNGNGQLGLGSS 242

Query: 307 HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP 366
            +  QP   +    +GIHV RV+ G  H + L   G VY WG    G LG G++ +++ P
Sbjct: 243 GN--QPTPCRVAALQGIHVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYP 300

Query: 367 EPLSSLKSH-LAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFP 410
            P+S  K   + +  C     +      G+VY +G     S+  P
Sbjct: 301 TPISVEKDRIIEIAACHSTHTSAAKTQGGNVYMWGQCRGQSVTLP 345



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 72/253 (28%), Positives = 122/253 (48%), Gaps = 7/253 (2%)

Query: 230 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE-EVGSVVQIAAGPSYMLAVTGNG 288
           + T+   +   G+N  G LG GD      P+ +  L  +  + +   +GP  +LA T  G
Sbjct: 60  YTTVNNEIFVLGTNCCGCLGLGDVQSTIEPRRLDSLSGKKIACLSYGSGPHIVLATT-EG 118

Query: 289 VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 348
            V+++G  +   LG+G  +  L P  I T       V+ V+ G  H + L S G V+ WG
Sbjct: 119 EVFTWGHNAYSQLGNGTTNHGLVPCYIST-NLSNKQVIEVACGSYHSLVLTSDGEVFAWG 177

Query: 349 KGYCGALGHGDEIDKTLPEPLS-SLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSL 407
               G +G G   ++ +P  ++  L++   V +   +  +  +VD G VY +G+ G G L
Sbjct: 178 YNNSGQVGSGSTANQPIPRRVTGCLQNKAVVNIACGQMCSMAVVDAGEVYVWGYNGNGQL 237

Query: 408 GFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTL 467
           G    G S     P  + +L+  HV +++ G  HT+V+TD G+++ +G N   QLG    
Sbjct: 238 GL---GSSGNQPTPCRVAALQGIHVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNK 294

Query: 468 RGCLEPTEIFIQE 480
                PT I +++
Sbjct: 295 SNQSYPTPISVEK 307



 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 74/277 (26%), Positives = 124/277 (44%), Gaps = 12/277 (4%)

Query: 170 ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG--VPCKQVTAGLNF 227
           ++ N   +   + ++F  G N   C G  D    I  PR +++L G  + C    +G + 
Sbjct: 53  SASNEVLYTTVNNEIFVLGTNCCGCLGLGDVQSTI-EPRRLDSLSGKKIACLSYGSGPHI 111

Query: 228 TGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN 287
               T  G V T G N + QLG+G T     P  I+       V+++A G  + L +T +
Sbjct: 112 V-LATTEGEVFTWGHNAYSQLGNGTTNHGLVPCYISTNLSNKQVIEVACGSYHSLVLTSD 170

Query: 288 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 347
           G V+++G  ++  +G G   ++  PR + T   +   VV ++ G    +A+  +G VY W
Sbjct: 171 GEVFAWGYNNSGQVGSGSTANQPIPRRV-TGCLQNKAVVNIACGQMCSMAVVDAGEVYVW 229

Query: 348 GKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSL 407
           G    G LG G   ++  P  +++L+     +V      T VL D G VY +G   +G L
Sbjct: 230 GYNGNGQLGLGSSGNQPTPCRVAALQGIHVQRVACGYAHTLVLTDEGQVYAWGANSYGQL 289

Query: 408 GFPDRGVSD-----KVLRPRILDSLRAH--HVSQIST 437
           G  ++          V + RI++    H  H S   T
Sbjct: 290 GTGNKSNQSYPTPISVEKDRIIEIAACHSTHTSAAKT 326


>gi|148704197|gb|EDL36144.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
           containing protein 1, isoform CRA_b [Mus musculus]
          Length = 563

 Score =  111 bits (277), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 75/254 (29%), Positives = 126/254 (49%), Gaps = 9/254 (3%)

Query: 230 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGSVVQIAAGPSYMLAVTGN 287
           ++T    V   G N    LG GD      PK +  L  +++ S+    +GP ++L  T +
Sbjct: 68  YVTDNDEVFVFGLNYSNCLGTGDNQSTLVPKKLEALCGKKIKSL-SYGSGP-HVLLTTED 125

Query: 288 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 347
           GVVY++G      LG+G  +  + P  + T       V+ V+ G  H +AL + G ++ W
Sbjct: 126 GVVYAWGHNGYSQLGNGTTNQGIAPVQVCT-NLLIKQVIEVACGSHHSMALAADGELFAW 184

Query: 348 GKGYCGALGHGDEIDKTLPEPLSS-LKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGS 406
           G   CG +G G   ++  P  +++ L +   V +   +  +  ++D+G VYG+G+ G G 
Sbjct: 185 GYNNCGQVGSGSTANQPTPRKVTNCLHTKRVVNIACGQTSSMAVLDSGEVYGWGYNGNGQ 244

Query: 407 LGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDT 466
           LG  + G     L P  + +L    V+QI  G  HT+ +TD G L+ +G N   QLG  +
Sbjct: 245 LGLGNNG---NQLTPVRVAALHGMCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGS 301

Query: 467 LRGCLEPTEIFIQE 480
               L PT+I +++
Sbjct: 302 KNNLLSPTQIMVEK 315



 Score = 92.8 bits (229), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 71/252 (28%), Positives = 116/252 (46%), Gaps = 6/252 (2%)

Query: 171 SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
           S N A +V  + +VF  G N S C G  D N+    P+ +EAL G   K ++ G      
Sbjct: 62  SANEAIYVTDNDEVFVFGLNYSNCLGTGD-NQSTLVPKKLEALCGKKIKSLSYGSGPHVL 120

Query: 231 LTIR-GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 289
           LT   G V+  G N + QLG+G T     P  +     +  V+++A G  + +A+  +G 
Sbjct: 121 LTTEDGVVYAWGHNGYSQLGNGTTNQGIAPVQVCTNLLIKQVIEVACGSHHSMALAADGE 180

Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 349
           ++++G  +   +G G   ++  PR +         VV ++ G    +A+  SG VY WG 
Sbjct: 181 LFAWGYNNCGQVGSGSTANQPTPRKVTNCLHTK-RVVNIACGQTSSMAVLDSGEVYGWGY 239

Query: 350 GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGF 409
              G LG G+  ++  P  +++L      Q+      T  L D G +Y +G   +G LG 
Sbjct: 240 NGNGQLGLGNNGNQLTPVRVAALHGMCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLG- 298

Query: 410 PDRGVSDKVLRP 421
              G  + +L P
Sbjct: 299 --TGSKNNLLSP 308



 Score = 82.8 bits (203), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 73/286 (25%), Positives = 115/286 (40%), Gaps = 5/286 (1%)

Query: 117 TTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS-ASENHA 175
           T+      +  N  VF  G +    LG G   +  V   ++       +  +S  S  H 
Sbjct: 61  TSANEAIYVTDNDEVFVFGLNYSNCLGTGDNQSTLVP-KKLEALCGKKIKSLSYGSGPHV 119

Query: 176 AFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRG 235
               + G V+  G N     G+  TN+ I   ++   L      +V  G + +  L   G
Sbjct: 120 LLTTEDGVVYAWGHNGYSQLGNGTTNQGIAPVQVCTNLLIKQVIEVACGSHHSMALAADG 179

Query: 236 HVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 295
            +   G N  GQ+G G T ++PTP+ +        VV IA G +  +AV  +G VY +G 
Sbjct: 180 ELFAWGYNNCGQVGSGSTANQPTPRKVTNCLHTKRVVNIACGQTSSMAVLDSGEVYGWGY 239

Query: 296 GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGAL 355
             N  LG G   ++L P  +      G+ V ++  G  H +AL   G +Y WG    G L
Sbjct: 240 NGNGQLGLGNNGNQLTPVRVAALH--GMCVNQIVCGYAHTLALTDEGLLYAWGANTYGQL 297

Query: 356 GHGDEIDKTLPEPLSSLKSH-LAVQVCARKRKTFVLVDTGSVYGFG 400
           G G + +   P  +   K   + +  C     +      G VY +G
Sbjct: 298 GTGSKNNLLSPTQIMVEKERVIEIAACHSTHTSAAKTQGGHVYMWG 343



 Score = 63.2 bits (152), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 55/184 (29%), Positives = 86/184 (46%), Gaps = 6/184 (3%)

Query: 114 MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +++  G +H++ L ++  +F+ G + CG +G G    Q       N      VV ++  +
Sbjct: 163 IEVACGSHHSMALAADGELFAWGYNNCGQVGSGSTANQPTPRKVTNCLHTKRVVNIACGQ 222

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
             +  VL SG+V+  G N +   G    N     P  V AL G+   Q+  G   T  LT
Sbjct: 223 TSSMAVLDSGEVYGWGYNGNGQLG-LGNNGNQLTPVRVAALHGMCVNQIVCGYAHTLALT 281

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPS--YMLAVTGNGVV 290
             G ++  G+NT+GQLG G   +  +P  I  + E   V++IAA  S     A T  G V
Sbjct: 282 DEGLLYAWGANTYGQLGTGSKNNLLSPTQI--MVEKERVIEIAACHSTHTSAAKTQGGHV 339

Query: 291 YSFG 294
           Y +G
Sbjct: 340 YMWG 343


>gi|444911351|ref|ZP_21231526.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
 gi|444718109|gb|ELW58925.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
          Length = 1085

 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 104/369 (28%), Positives = 163/369 (44%), Gaps = 25/369 (6%)

Query: 111 AGNMQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS 169
           +G + +  G  H+L L ++   ++ G +  G LG   + T     T    P  AHVV ++
Sbjct: 637 SGVVALAAGDSHSLALRADGVAWAWGGNDQGQLG---DATTLERSTPAAVPGLAHVVALA 693

Query: 170 ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
           A   H+  +   G   + G+N     G          P  V+       K V AG + + 
Sbjct: 694 AGNAHSLVLHADGTSSSWGNN---AYGQLGDGTSTLHPVPVQVPGPSAMKGVAAGGSHSL 750

Query: 230 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 289
            +   G V   G+N  G+LG G  L RP P  +   + +GS V ++AG ++ LAV  +G 
Sbjct: 751 AVRSDGTVWAWGNNGSGELGDGTGLQRPRPVQV---QGLGSAVAVSAGTNHSLAVQSDGT 807

Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH-VVRVSAGDEHVVALDSSGYVYTWG 348
           V+++G  S   LG G       P      R  G++ V+ VSAG  H +AL S G V+ WG
Sbjct: 808 VWAWGGNSQGQLGDGTGITRYVP-----VRVSGLNGVMAVSAGSAHSLALRSDGTVWAWG 862

Query: 349 KGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLG 408
             + G LG      + +P  +  L     V + A    +  +   G+V+ +G+  +G LG
Sbjct: 863 YNFYGQLGDATSTQRLVPIQVPGLTG--VVSIAAGTHHSLAVRSDGTVWAWGYNFYGQLG 920

Query: 409 FPDRGVSDKVLR-PRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTL 467
                   K+ R P +     A  VS ++ G YH++ V   G ++ +G N   QLG  T 
Sbjct: 921 D-----GTKIQRSPPVQVPGLAGMVS-VAAGTYHSLAVHSNGTVWAWGYNNHGQLGDGTT 974

Query: 468 RGCLEPTEI 476
              L P  I
Sbjct: 975 TQRLLPVPI 983



 Score =  109 bits (273), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 103/372 (27%), Positives = 173/372 (46%), Gaps = 23/372 (6%)

Query: 107 VETSAGNMQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHV 165
           V+  +G + ++ G  H+L ++S+  V + G +  G LG G  T +   +T +   S   V
Sbjct: 183 VQGLSGVVALSAGSTHSLAVLSDGKVKAWGDNYYGQLGDGSSTER---WTPVLVSSLTGV 239

Query: 166 VQVSASENHAAFVLQSGQVFTCGDNSSFCCG-HRDTNRPIFRPRLVEALKGVPCKQVTAG 224
             V A   H+  +   G V   G+N S   G    T RP+  P +V  L  V  + + AG
Sbjct: 240 KSVVAGTFHSLALCSDGTVRAWGENGSGQLGISSTTRRPV--PVVVPGLTNV--QALAAG 295

Query: 225 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 284
              +  L   G V   G+N HGQ+G+G    + TP  +     VG +  IAAG ++ LA+
Sbjct: 296 SAHSLALRSDGTVRAWGNNDHGQVGNGTISQQLTPVQV---PGVGRMKSIAAGGAHSLAM 352

Query: 285 TGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
             +G+ +++G  S   LG G+   +L+P  +   R +    + +  G+ H +AL + G V
Sbjct: 353 RADGITWAWGDDSQGQLGDGQSSQQLRPARVLGQRIR----MPLGTGNRHSLALHADGTV 408

Query: 345 YTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGF 404
           + WG    G LG G ++ +TLP  +  L       + A    +      G+V+ +G   F
Sbjct: 409 WAWGVNTAGQLGDGTDLPRTLPVQVPGLAG--VHTLSATTSHSLAARADGTVWAWGDNAF 466

Query: 405 GSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 464
           G LG    G + + L P  +  L    V  +S+   H++ V+  G ++ +G N   +LG 
Sbjct: 467 GQLG---DGTTTQRLLPVQVPGLAG--VDTVSSMHQHSLAVSRDGTVWAWGFNGSGRLGD 521

Query: 465 DTLRGCLEPTEI 476
            T    L P ++
Sbjct: 522 GTTLSRLTPVQV 533



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 109/362 (30%), Positives = 158/362 (43%), Gaps = 22/362 (6%)

Query: 116  ITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
            +  G  H+L + S+ +V++ G++  G LG G   T       +        V VSA  NH
Sbjct: 742  VAAGGSHSLAVRSDGTVWAWGNNGSGELGDG---TGLQRPRPVQVQGLGSAVAVSAGTNH 798

Query: 175  AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 234
            +  V   G V+  G NS    G   T    + P  V  L GV    V+AG   +  L   
Sbjct: 799  SLAVQSDGTVWAWGGNSQGQLGD-GTGITRYVPVRVSGLNGV--MAVSAGSAHSLALRSD 855

Query: 235  GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 294
            G V   G N +GQLG   +  R  P  +  L     VV IAAG  + LAV  +G V+++G
Sbjct: 856  GTVWAWGYNFYGQLGDATSTQRLVPIQVPGLT---GVVSIAAGTHHSLAVRSDGTVWAWG 912

Query: 295  SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGA 354
                  LG G +     P  +Q     G+  V V+AG  H +A+ S+G V+ WG    G 
Sbjct: 913  YNFYGQLGDGTKIQRSPP--VQVPGLAGM--VSVAAGTYHSLAVHSNGTVWAWGYNNHGQ 968

Query: 355  LGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGV 414
            LG G    + LP P+SS    +A    A    + V+   G+V+G+G      LG  D   
Sbjct: 969  LGDGTTTQRLLPVPISSSSGVIA---AAANWHSLVVRTDGTVWGWGSNNASQLG--DGST 1023

Query: 415  SDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPT 474
            SD   R     S   + V  IS+G  H++ +   G ++ +G     QLG   +   L P 
Sbjct: 1024 SD---RKMPTPSSVPNGVRSISSGANHSLALRSDGTVWAWGFGNSGQLGDGVMSMRLVPA 1080

Query: 475  EI 476
             +
Sbjct: 1081 GV 1082



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 102/358 (28%), Positives = 158/358 (44%), Gaps = 28/358 (7%)

Query: 127 SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFT 186
           ++ +V++ G +  G LG G  T + +    +  P  A V  VS+   H+  V + G V+ 
Sbjct: 454 ADGTVWAWGDNAFGQLGDGTTTQRLLP---VQVPGLAGVDTVSSMHQHSLAVSRDGTVWA 510

Query: 187 CGDNSSFCCGHRDT-NR--PIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 243
            G N S   G   T +R  P+  P L   +       V AG   +  L   G V   G N
Sbjct: 511 WGFNGSGRLGDGTTLSRLTPVQVPGLSSMVA------VAAGSTHSLALRADGTVWAWGDN 564

Query: 244 THGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH 303
           ++G LG G TL R +P  +  L     VV +AAG  Y LAV   G V+++G      LG 
Sbjct: 565 SNGALGDGTTLRRLSPVQVPGLS---GVVALAAGNGYSLAVDAQGSVWAWGYNGMGQLGD 621

Query: 304 GEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK 363
           G       PR   T       VV ++AGD H +AL + G  + WG    G LG    +++
Sbjct: 622 GTT----TPRVTPTQAPALSGVVALAAGDSHSLALRADGVAWAWGGNDQGQLGDATTLER 677

Query: 364 TLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRI 423
           + P  +  L +H+ V + A    + VL   G+   +G   +G LG    G S   L P  
Sbjct: 678 STPAAVPGL-AHV-VALAAGNAHSLVLHADGTSSSWGNNAYGQLG---DGTS--TLHPVP 730

Query: 424 LDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQEM 481
           +       +  ++ G  H++ V   G ++ +G+N   +LG  T  G   P  + +Q +
Sbjct: 731 VQVPGPSAMKGVAAGGSHSLAVRSDGTVWAWGNNGSGELGDGT--GLQRPRPVQVQGL 786



 Score = 92.0 bits (227), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 89/313 (28%), Positives = 139/313 (44%), Gaps = 23/313 (7%)

Query: 167 QVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN 226
           QV+A   H+  +   G V+  GDN+    G   T      P  V++L  V    V   + 
Sbjct: 41  QVAAGAAHSLMLRSDGTVWAWGDNTYGQLGD-GTGITQRLPVRVQSLDSV----VALAVG 95

Query: 227 FTGFLTIR--GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 284
           +   L +R  G V   G N  GQLG G       P  +  L     VV IAAG  + LA+
Sbjct: 96  YQHSLALRSDGTVWAWGDNFFGQLGDGSDAQSQVPIQVWSLN---GVVAIAAGDHHSLAL 152

Query: 285 TGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH-VVRVSAGDEHVVALDSSGY 343
             +G V+++G  +     HG+  D+    +    + +G+  VV +SAG  H +A+ S G 
Sbjct: 153 LSDGSVWAWGYNA-----HGQLGDDTTVASPLPVQVQGLSGVVALSAGSTHSLAVLSDGK 207

Query: 344 VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 403
           V  WG  Y G LG G   ++  P  +SSL       V A    +  L   G+V  +G  G
Sbjct: 208 VKAWGDNYYGQLGDGSSTERWTPVLVSSLTG--VKSVVAGTFHSLALCSDGTVRAWGENG 265

Query: 404 FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 463
            G L     G+S    RP  +      +V  ++ G  H++ +   G +  +G+N+  Q+G
Sbjct: 266 SGQL-----GISSTTRRPVPVVVPGLTNVQALAAGSAHSLALRSDGTVRAWGNNDHGQVG 320

Query: 464 HDTLRGCLEPTEI 476
           + T+   L P ++
Sbjct: 321 NGTISQQLTPVQV 333



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 101/377 (26%), Positives = 160/377 (42%), Gaps = 23/377 (6%)

Query: 112 GNMQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSA 170
           G+ Q+  G  H+L++ S+ +V++ G +  G LG G   TQ +    +   S   VV ++ 
Sbjct: 38  GHEQVAAGAAHSLMLRSDGTVWAWGDNTYGQLGDGTGITQRLP---VRVQSLDSVVALAV 94

Query: 171 SENHAAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
              H+  +   G V+  GDN     G   D    +  P  V +L GV    + AG + + 
Sbjct: 95  GYQHSLALRSDGTVWAWGDNFFGQLGDGSDAQSQV--PIQVWSLNGVVA--IAAGDHHSL 150

Query: 230 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 289
            L   G V   G N HGQLG   T+  P P  +  L     VV ++AG ++ LAV  +G 
Sbjct: 151 ALLSDGSVWAWGYNAHGQLGDDTTVASPLPVQVQGLS---GVVALSAGSTHSLAVLSDGK 207

Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 349
           V ++G      LG G   +   P  + +       V  V AG  H +AL S G V  WG+
Sbjct: 208 VKAWGDNYYGQLGDGSSTERWTPVLVSSL----TGVKSVVAGTFHSLALCSDGTVRAWGE 263

Query: 350 GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGF 409
              G LG      + +P  +  L +  A+   A    +  L   G+V  +G    G +G 
Sbjct: 264 NGSGQLGISSTTRRPVPVVVPGLTNVQAL--AAGSAHSLALRSDGTVRAWGNNDHGQVG- 320

Query: 410 PDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG 469
              G   + L P  +  +    +  I+ G  H++ +   G  + +GD+ + QLG      
Sbjct: 321 --NGTISQQLTPVQVPGV--GRMKSIAAGGAHSLAMRADGITWAWGDDSQGQLGDGQSSQ 376

Query: 470 CLEPTEIFIQEMEEDTG 486
            L P  +  Q +    G
Sbjct: 377 QLRPARVLGQRIRMPLG 393



 Score = 89.7 bits (221), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 95/358 (26%), Positives = 146/358 (40%), Gaps = 33/358 (9%)

Query: 116 ITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQC----VSFTRINFPSAAHVVQVSA 170
           I  G  H+L + ++   ++ G    G LG G  + Q     V   RI  P       +  
Sbjct: 342 IAAGGAHSLAMRADGITWAWGDDSQGQLGDGQSSQQLRPARVLGQRIRMP-------LGT 394

Query: 171 SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
              H+  +   G V+  G N++   G   T+ P   P  V  L GV     T   +    
Sbjct: 395 GNRHSLALHADGTVWAWGVNTAGQLGD-GTDLPRTLPVQVPGLAGVHTLSATTSHSLA-- 451

Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 290
               G V   G N  GQLG G T  R  P  +  L  V +V  +     + LAV+ +G V
Sbjct: 452 ARADGTVWAWGDNAFGQLGDGTTTQRLLPVQVPGLAGVDTVSSMH---QHSLAVSRDGTV 508

Query: 291 YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKG 350
           +++G   +  LG G     L P  +         +V V+AG  H +AL + G V+ WG  
Sbjct: 509 WAWGFNGSGRLGDGTTLSRLTPVQVPGLSS----MVAVAAGSTHSLALRADGTVWAWGDN 564

Query: 351 YCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFP 410
             GALG G  + +  P  +  L     V + A    +  +   GSV+ +G+ G G LG  
Sbjct: 565 SNGALGDGTTLRRLSPVQVPGLSG--VVALAAGNGYSLAVDAQGSVWAWGYNGMGQLG-- 620

Query: 411 DRGVSDKVLRPRILDSLRA--HHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDT 466
                D    PR+  +       V  ++ G  H++ +   G  + +G N++ QLG  T
Sbjct: 621 -----DGTTTPRVTPTQAPALSGVVALAAGDSHSLALRADGVAWAWGGNDQGQLGDAT 673



 Score = 89.7 bits (221), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 79/258 (30%), Positives = 119/258 (46%), Gaps = 16/258 (6%)

Query: 208 RLVEALKGVPC--KQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL 265
           R+  AL   P   +QV AG   +  L   G V   G NT+GQLG G  + +  P  +  L
Sbjct: 27  RIEAALTPPPLGHEQVAAGAAHSLMLRSDGTVWAWGDNTYGQLGDGTGITQRLPVRVQSL 86

Query: 266 EEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHV 325
           +   SVV +A G  + LA+  +G V+++  G NF    G+  D      IQ +   G  V
Sbjct: 87  D---SVVALAVGYQHSLALRSDGTVWAW--GDNFFGQLGDGSDAQSQVPIQVWSLNG--V 139

Query: 326 VRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKR 385
           V ++AGD H +AL S G V+ WG    G LG    +   LP  +  L     V + A   
Sbjct: 140 VAIAAGDHHSLALLSDGSVWAWGYNAHGQLGDDTTVASPLPVQVQGLSG--VVALSAGST 197

Query: 386 KTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVV 445
            +  ++  G V  +G   +G LG    G S +   P ++ SL    V  +  G +H++ +
Sbjct: 198 HSLAVLSDGKVKAWGDNYYGQLG---DGSSTERWTPVLVSSLTG--VKSVVAGTFHSLAL 252

Query: 446 TDRGRLFGFGDNERAQLG 463
              G +  +G+N   QLG
Sbjct: 253 CSDGTVRAWGENGSGQLG 270



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 81/262 (30%), Positives = 114/262 (43%), Gaps = 19/262 (7%)

Query: 112  GNMQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSA 170
            G M ++ G  H+L L S+ +V++ G +  G LG    T + V    I  P    VV ++A
Sbjct: 838  GVMAVSAGSAHSLALRSDGTVWAWGYNFYGQLGDATSTQRLVP---IQVPGLTGVVSIAA 894

Query: 171  SENHAAFVLQSGQVFTCGDN--SSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFT 228
              +H+  V   G V+  G N       G +    P   P  V  L G+    V AG   +
Sbjct: 895  GTHHSLAVRSDGTVWAWGYNFYGQLGDGTKIQRSP---PVQVPGLAGM--VSVAAGTYHS 949

Query: 229  GFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG 288
              +   G V   G N HGQLG G T  R  P    P+     V+  AA   + L V  +G
Sbjct: 950  LAVHSNGTVWAWGYNNHGQLGDGTTTQRLLP---VPISSSSGVIAAAAN-WHSLVVRTDG 1005

Query: 289  VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 348
             V+ +GS +   LG G   D    R + T       V  +S+G  H +AL S G V+ WG
Sbjct: 1006 TVWGWGSNNASQLGDGSTSD----RKMPTPSSVPNGVRSISSGANHSLALRSDGTVWAWG 1061

Query: 349  KGYCGALGHGDEIDKTLPEPLS 370
             G  G LG G    + +P  +S
Sbjct: 1062 FGNSGQLGDGVMSMRLVPAGVS 1083


>gi|58376301|ref|XP_308044.2| AGAP002151-PA [Anopheles gambiae str. PEST]
 gi|55246357|gb|EAA03694.2| AGAP002151-PA [Anopheles gambiae str. PEST]
          Length = 474

 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 90/371 (24%), Positives = 159/371 (42%), Gaps = 43/371 (11%)

Query: 122 HTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
           H++LI  N   F+ G +    LGHG +T  C   T++   +  +V+Q +   NH  F+  
Sbjct: 117 HSVLIDENWKAFTFGRNQLSQLGHG-DTVTCEKPTQVADLADFNVIQAACGRNHTLFLTD 175

Query: 181 SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTC 240
           +G V+ CGDN S  CG  +    I  P  + +  G P  +V  G  F+  L I+G++HT 
Sbjct: 176 TGTVYACGDNKSGQCGVGNKLPTITSPTRI-SYNGPPIIKVGCGAEFSVILDIKGNLHTF 234

Query: 241 GSNTHGQLGHGDT------------------------LDRPTPKSIAPLEEVGSVVQIAA 276
           G   +GQLGH                           +++     + P+E V +++  A 
Sbjct: 235 GLPEYGQLGHNTDGRYFVNSTKMSFHFETQPRKVLVYMEKNKEGHVLPIENV-NIIDFAC 293

Query: 277 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVV 336
           G ++ +A+      YS+G G    LGH EQ DE+ PR I+ F  +   V+RV  G  + +
Sbjct: 294 GNNHTVAIDSKNRAYSWGFGGIGRLGHAEQKDEMVPRLIKFFDTQNRKVMRVFCGSSYSL 353

Query: 337 ALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSV 396
           A+   G +Y +G+      G  +      P+P+  L       +        +  D   +
Sbjct: 354 AISDIGSLYLFGQN--KKTGEAN----MYPKPVQDLAGWNITSIGTGYTSIVISADDSLI 407

Query: 397 YGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGD 456
                  +G LG  D   S     P+ +  +    +  ++ G  H++++ +        +
Sbjct: 408 AWGASPTYGELGLGDLQKSSST--PKEVTRMEGMKIPMVALGYSHSMLLVNT-------E 458

Query: 457 NERAQLGHDTL 467
           +E+ +  +D L
Sbjct: 459 HEKTKEKYDNL 469



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 58/235 (24%), Positives = 96/235 (40%), Gaps = 34/235 (14%)

Query: 239 TCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
           T G N   QLGHGDT+    P  +A L +  +V+Q A G ++ L +T  G VY+ G   +
Sbjct: 129 TFGRNQLSQLGHGDTVTCEKPTQVADLADF-NVIQAACGRNHTLFLTDTGTVYACGDNKS 187

Query: 299 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 358
              G G +   +      ++   G  +++V  G E  V LD  G ++T+G    G LGH 
Sbjct: 188 GQCGVGNKLPTITSPTRISYN--GPPIIKVGCGAEFSVILDIKGNLHTFGLPEYGQLGHN 245

Query: 359 DEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKV 418
            +    +    +S K     +   RK    VLV                 + ++     V
Sbjct: 246 TDGRYFV----NSTKMSFHFETQPRK----VLV-----------------YMEKNKEGHV 280

Query: 419 LRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEP 473
           L       +   ++   + G  HTV +  + R + +G     +LGH   +  + P
Sbjct: 281 L------PIENVNIIDFACGNNHTVAIDSKNRAYSWGFGGIGRLGHAEQKDEMVP 329


>gi|432106315|gb|ELK32196.1| RCC1 and BTB domain-containing protein 1 [Myotis davidii]
          Length = 531

 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 82/255 (32%), Positives = 126/255 (49%), Gaps = 11/255 (4%)

Query: 230 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGSVVQIAAGPSYMLAVTGN 287
           ++T    V   G N    LG GD     TPK +  L  +++ S+    +GP  +L+ T +
Sbjct: 36  YVTEDDEVFVFGLNYSNCLGTGDNQSTLTPKKLEALCGKKIKSL-SYGSGPHVLLS-TED 93

Query: 288 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGI-HVVRVSAGDEHVVALDSSGYVYT 346
           GVVY++G      LG+G  +  + P  IQ      I  VV V+ G  H VAL + G V+ 
Sbjct: 94  GVVYAWGHNGYSQLGNGTTNQGIAP--IQVCTNLLIKQVVEVACGSHHSVALAADGEVFA 151

Query: 347 WGKGYCGALGHGDEIDKTLPEPLSS-LKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFG 405
           WG   CG +G G   ++  P  +++ L     V +   +  +  ++DTG VYG+G+ G G
Sbjct: 152 WGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDTGEVYGWGYNGNG 211

Query: 406 SLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHD 465
            LG    G +   L P  + +L +  V+QI  G  HT+ +TD G L+ +G N   QLG  
Sbjct: 212 QLGL---GNNVNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTG 268

Query: 466 TLRGCLEPTEIFIQE 480
                L PT I +++
Sbjct: 269 NKNNLLSPTHIMVEK 283



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 73/255 (28%), Positives = 120/255 (47%), Gaps = 12/255 (4%)

Query: 171 SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
           S N A +V +  +VF  G N S C G  D N+    P+ +EAL G   K ++ G      
Sbjct: 30  SANEALYVTEDDEVFVFGLNYSNCLGTGD-NQSTLTPKKLEALCGKKIKSLSYGSGPHVL 88

Query: 231 LTIR-GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 289
           L+   G V+  G N + QLG+G T     P  +     +  VV++A G  + +A+  +G 
Sbjct: 89  LSTEDGVVYAWGHNGYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGSHHSVALAADGE 148

Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRV---SAGDEHVVALDSSGYVYT 346
           V+++G  +   +G G   ++  PR +       +H+ RV   + G    +A+  +G VY 
Sbjct: 149 VFAWGYNNCGQVGSGSTANQPTPRKV----TNCLHIKRVVGIACGQTSSMAVLDTGEVYG 204

Query: 347 WGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGS 406
           WG    G LG G+ +++  P  +++L S    Q+      T  L D G +Y +G   +G 
Sbjct: 205 WGYNGNGQLGLGNNVNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQ 264

Query: 407 LGFPDRGVSDKVLRP 421
           LG    G  + +L P
Sbjct: 265 LG---TGNKNNLLSP 276



 Score = 80.1 bits (196), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 62/228 (27%), Positives = 96/228 (42%), Gaps = 3/228 (1%)

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
           H     + G V+  G N     G+  TN+ I   ++   L      +V  G + +  L  
Sbjct: 86  HVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGSHHSVALAA 145

Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
            G V   G N  GQ+G G T ++PTP+ +     +  VV IA G +  +AV   G VY +
Sbjct: 146 DGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDTGEVYGW 205

Query: 294 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 353
           G   N  LG G   ++L P  +       + V ++  G  H +AL   G +Y WG    G
Sbjct: 206 GYNGNGQLGLGNNVNQLTPVRVAALH--SVCVNQIVCGYAHTLALTDEGLLYAWGANTYG 263

Query: 354 ALGHGDEIDKTLPEPLSSLKSHLA-VQVCARKRKTFVLVDTGSVYGFG 400
            LG G++ +   P  +   K  +  +  C     +      G VY +G
Sbjct: 264 QLGTGNKNNLLSPTHIMVEKERVVEIAACHSAHTSAAKTQGGHVYMWG 311



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 56/184 (30%), Positives = 86/184 (46%), Gaps = 6/184 (3%)

Query: 114 MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +++  G +H++ L ++  VF+ G + CG +G G    Q       N      VV ++  +
Sbjct: 131 VEVACGSHHSVALAADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQ 190

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
             +  VL +G+V+  G N +   G    N     P  V AL  V   Q+  G   T  LT
Sbjct: 191 TSSMAVLDTGEVYGWGYNGNGQLG-LGNNVNQLTPVRVAALHSVCVNQIVCGYAHTLALT 249

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPS--YMLAVTGNGVV 290
             G ++  G+NT+GQLG G+  +  +P  I  + E   VV+IAA  S     A T  G V
Sbjct: 250 DEGLLYAWGANTYGQLGTGNKNNLLSPTHI--MVEKERVVEIAACHSAHTSAAKTQGGHV 307

Query: 291 YSFG 294
           Y +G
Sbjct: 308 YMWG 311


>gi|81885004|sp|Q6NXM2.1|RCBT1_MOUSE RecName: Full=RCC1 and BTB domain-containing protein 1; AltName:
           Full=Regulator of chromosome condensation and BTB
           domain-containing protein 1
 gi|44890811|gb|AAH67005.1| Regulator of chromosome condensation (RCC1) and BTB (POZ) domain
           containing protein 1 [Mus musculus]
          Length = 531

 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 75/254 (29%), Positives = 126/254 (49%), Gaps = 9/254 (3%)

Query: 230 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGSVVQIAAGPSYMLAVTGN 287
           ++T    V   G N    LG GD      PK +  L  +++ S+    +GP ++L  T +
Sbjct: 36  YVTDNDEVFVFGLNYSNCLGTGDNQSTLVPKKLEALCGKKIKSL-SYGSGP-HVLLTTED 93

Query: 288 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 347
           GVVY++G      LG+G  +  + P  + T       V+ V+ G  H +AL + G ++ W
Sbjct: 94  GVVYAWGHNGYSQLGNGTTNQGIAPVQVCT-NLLIKQVIEVACGSHHSMALAADGELFAW 152

Query: 348 GKGYCGALGHGDEIDKTLPEPLSS-LKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGS 406
           G   CG +G G   ++  P  +++ L +   V +   +  +  ++D+G VYG+G+ G G 
Sbjct: 153 GYNNCGQVGSGSTANQPTPRKVTNCLHTKRVVNIACGQTSSMAVLDSGEVYGWGYNGNGQ 212

Query: 407 LGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDT 466
           LG  + G     L P  + +L    V+QI  G  HT+ +TD G L+ +G N   QLG  +
Sbjct: 213 LGLGNNG---NQLTPVRVAALHGMCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGS 269

Query: 467 LRGCLEPTEIFIQE 480
               L PT+I +++
Sbjct: 270 KNNLLSPTQIMVEK 283



 Score = 92.4 bits (228), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 71/252 (28%), Positives = 116/252 (46%), Gaps = 6/252 (2%)

Query: 171 SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
           S N A +V  + +VF  G N S C G  D N+    P+ +EAL G   K ++ G      
Sbjct: 30  SANEAIYVTDNDEVFVFGLNYSNCLGTGD-NQSTLVPKKLEALCGKKIKSLSYGSGPHVL 88

Query: 231 LTIR-GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 289
           LT   G V+  G N + QLG+G T     P  +     +  V+++A G  + +A+  +G 
Sbjct: 89  LTTEDGVVYAWGHNGYSQLGNGTTNQGIAPVQVCTNLLIKQVIEVACGSHHSMALAADGE 148

Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 349
           ++++G  +   +G G   ++  PR +         VV ++ G    +A+  SG VY WG 
Sbjct: 149 LFAWGYNNCGQVGSGSTANQPTPRKVTNCLHTK-RVVNIACGQTSSMAVLDSGEVYGWGY 207

Query: 350 GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGF 409
              G LG G+  ++  P  +++L      Q+      T  L D G +Y +G   +G LG 
Sbjct: 208 NGNGQLGLGNNGNQLTPVRVAALHGMCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLG- 266

Query: 410 PDRGVSDKVLRP 421
              G  + +L P
Sbjct: 267 --TGSKNNLLSP 276



 Score = 82.4 bits (202), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 73/286 (25%), Positives = 115/286 (40%), Gaps = 5/286 (1%)

Query: 117 TTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS-ASENHA 175
           T+      +  N  VF  G +    LG G   +  V   ++       +  +S  S  H 
Sbjct: 29  TSANEAIYVTDNDEVFVFGLNYSNCLGTGDNQSTLVP-KKLEALCGKKIKSLSYGSGPHV 87

Query: 176 AFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRG 235
               + G V+  G N     G+  TN+ I   ++   L      +V  G + +  L   G
Sbjct: 88  LLTTEDGVVYAWGHNGYSQLGNGTTNQGIAPVQVCTNLLIKQVIEVACGSHHSMALAADG 147

Query: 236 HVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 295
            +   G N  GQ+G G T ++PTP+ +        VV IA G +  +AV  +G VY +G 
Sbjct: 148 ELFAWGYNNCGQVGSGSTANQPTPRKVTNCLHTKRVVNIACGQTSSMAVLDSGEVYGWGY 207

Query: 296 GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGAL 355
             N  LG G   ++L P  +      G+ V ++  G  H +AL   G +Y WG    G L
Sbjct: 208 NGNGQLGLGNNGNQLTPVRVAALH--GMCVNQIVCGYAHTLALTDEGLLYAWGANTYGQL 265

Query: 356 GHGDEIDKTLPEPLSSLKSH-LAVQVCARKRKTFVLVDTGSVYGFG 400
           G G + +   P  +   K   + +  C     +      G VY +G
Sbjct: 266 GTGSKNNLLSPTQIMVEKERVIEIAACHSTHTSAAKTQGGHVYMWG 311



 Score = 62.8 bits (151), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 55/184 (29%), Positives = 86/184 (46%), Gaps = 6/184 (3%)

Query: 114 MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +++  G +H++ L ++  +F+ G + CG +G G    Q       N      VV ++  +
Sbjct: 131 IEVACGSHHSMALAADGELFAWGYNNCGQVGSGSTANQPTPRKVTNCLHTKRVVNIACGQ 190

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
             +  VL SG+V+  G N +   G    N     P  V AL G+   Q+  G   T  LT
Sbjct: 191 TSSMAVLDSGEVYGWGYNGNGQLG-LGNNGNQLTPVRVAALHGMCVNQIVCGYAHTLALT 249

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPS--YMLAVTGNGVV 290
             G ++  G+NT+GQLG G   +  +P  I  + E   V++IAA  S     A T  G V
Sbjct: 250 DEGLLYAWGANTYGQLGTGSKNNLLSPTQI--MVEKERVIEIAACHSTHTSAAKTQGGHV 307

Query: 291 YSFG 294
           Y +G
Sbjct: 308 YMWG 311


>gi|281202576|gb|EFA76778.1| regulator of chromosome condensation domain-containing protein
           [Polysphondylium pallidum PN500]
          Length = 2305

 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 75/232 (32%), Positives = 121/232 (52%), Gaps = 16/232 (6%)

Query: 232 TIRGHVHTCGSNTHGQLGHG--DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 289
           T RG + T GS ++ +LG    +   +PTP+ + P   +  +  I+ G  Y  A+T NG 
Sbjct: 540 TSRG-LMTWGSGSYCKLGFKSVEKDSQPTPERL-PNFNISDICSISCGSYYSAALTENGD 597

Query: 290 VYSFGSGSN-----FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           VY +G GS        LG+G   D+L P+ +++ +     +V +S G  H  A+ S+G +
Sbjct: 598 VYMWGRGSVKNPPIATLGNGTFDDQLLPQKVESLQE----IVVISIGFYHSAAVKSNGEL 653

Query: 345 YTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGF 404
            TWG G  G LGHGD  ++ +P+ + S+ SH   QV   ++ T  L   G V+ +G   +
Sbjct: 654 LTWGCGEDGQLGHGDVFNQPIPKVVQSITSHWVTQVQCGEKHTICLTKNGKVFTWGTSEY 713

Query: 405 GSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGD 456
           G LG  D   + K   P ++ SL  +H+ QI+ G  H  V+T+   +  FG+
Sbjct: 714 GQLGLGD---TQKNCTPMLVTSLDKYHIIQIACGATHNAVLTNNREVLVFGN 762



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 106/355 (29%), Positives = 156/355 (43%), Gaps = 30/355 (8%)

Query: 104 SDIVETSAGNMQITTGRYHTLLISNSSVFSCG-----SSLCGVLGHGPETTQCVSFTRIN 158
           SDI   S G+       Y   L  N  V+  G     +     LG+G    Q +      
Sbjct: 577 SDICSISCGSY------YSAALTENGDVYMWGRGSVKNPPIATLGNGTFDDQLLP---QK 627

Query: 159 FPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDT-NRPIFRPRLVEALKGVP 217
             S   +V +S    H+A V  +G++ T G       GH D  N+PI  P++V+++    
Sbjct: 628 VESLQEIVVISIGFYHSAAVKSNGELLTWGCGEDGQLGHGDVFNQPI--PKVVQSITSHW 685

Query: 218 CKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAG 277
             QV  G   T  LT  G V T G++ +GQLG GDT    TP  +  L++   ++QIA G
Sbjct: 686 VTQVQCGEKHTICLTKNGKVFTWGTSEYGQLGLGDTQKNCTPMLVTSLDKY-HIIQIACG 744

Query: 278 PSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
            ++   +T N  V  FG+G+      G  +    P  + +   K +++ R+S G     A
Sbjct: 745 ATHNAVLTNNREVLVFGNGA----AMGSANIISIPIMVPSL--KIMNIERLSCGHYSTAA 798

Query: 338 LDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVY 397
           L   G VYTWG G    LGHG    +  P+ + +L++    Q+    R    L D+G +Y
Sbjct: 799 LTECGDVYTWGSGQ--ELGHGHGTSEAHPKLVETLRNQSIRQISCGGRHMAFLTDSGKIY 856

Query: 398 GFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLF 452
             G   FG LG       D+  RP+ +DSL       IS G  H   + D  R F
Sbjct: 857 TSGKDPFGQLG---HAAGDQN-RPKKIDSLLKTTFMSISCGENHNAALFDTTRSF 907



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 79/314 (25%), Positives = 144/314 (45%), Gaps = 25/314 (7%)

Query: 158 NFPSAAHVVQVSASENHAAFVLQSGQVFTCG----DNSSFCCGHRDTNRPIFRPRLVEAL 213
           NF + + +  +S    ++A + ++G V+  G     N         T      P+ VE+L
Sbjct: 573 NF-NISDICSISCGSYYSAALTENGDVYMWGRGSVKNPPIATLGNGTFDDQLLPQKVESL 631

Query: 214 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
           + +    ++ G   +  +   G + T G    GQLGHGD  ++P PK +  +     V Q
Sbjct: 632 QEIVV--ISIGFYHSAAVKSNGELLTWGCGEDGQLGHGDVFNQPIPKVVQSITS-HWVTQ 688

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           +  G  + + +T NG V+++G+     LG G+      P  + +  +   H+++++ G  
Sbjct: 689 VQCGEKHTICLTKNGKVFTWGTSEYGQLGLGDTQKNCTPMLVTSLDK--YHIIQIACGAT 746

Query: 334 HVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDT 393
           H   L ++  V  +G G   A+G  + I  ++P  + SLK     ++      T  L + 
Sbjct: 747 HNAVLTNNREVLVFGNG--AAMGSANII--SIPIMVPSLKIMNIERLSCGHYSTAALTEC 802

Query: 394 GSVYGFG---WMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGR 450
           G VY +G    +G G       G S+    P+++++LR   + QIS G  H   +TD G+
Sbjct: 803 GDVYTWGSGQELGHG------HGTSEA--HPKLVETLRNQSIRQISCGGRHMAFLTDSGK 854

Query: 451 LFGFGDNERAQLGH 464
           ++  G +   QLGH
Sbjct: 855 IYTSGKDPFGQLGH 868



 Score = 72.8 bits (177), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 66/237 (27%), Positives = 108/237 (45%), Gaps = 22/237 (9%)

Query: 250 HGDTLDRP----------TPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNF 299
            G+ LD P          TP S  PL  V S     +  S     T  G++ ++GSGS  
Sbjct: 495 QGNGLDSPHHTTSTGGSFTPGSSPPLNAVNSAESSLSMRSATQLDTSRGLM-TWGSGSYC 553

Query: 300 CLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC-----GA 354
            LG      + QP   +        +  +S G  +  AL  +G VY WG+G         
Sbjct: 554 KLGFKSVEKDSQPTPERLPNFNISDICSISCGSYYSAALTENGDVYMWGRGSVKNPPIAT 613

Query: 355 LGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGV 414
           LG+G   D+ LP+ + SL+  + + +      +  +   G +  +G    G LG  D  V
Sbjct: 614 LGNGTFDDQLLPQKVESLQEIVVISIGFYH--SAAVKSNGELLTWGCGEDGQLGHGD--V 669

Query: 415 SDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH-DTLRGC 470
            ++ + P+++ S+ +H V+Q+  G  HT+ +T  G++F +G +E  QLG  DT + C
Sbjct: 670 FNQPI-PKVVQSITSHWVTQVQCGEKHTICLTKNGKVFTWGTSEYGQLGLGDTQKNC 725


>gi|169808411|ref|NP_082040.2| RCC1 and BTB domain-containing protein 1 [Mus musculus]
 gi|26329171|dbj|BAC28324.1| unnamed protein product [Mus musculus]
 gi|148704196|gb|EDL36143.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
           containing protein 1, isoform CRA_a [Mus musculus]
          Length = 531

 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 75/254 (29%), Positives = 126/254 (49%), Gaps = 9/254 (3%)

Query: 230 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGSVVQIAAGPSYMLAVTGN 287
           ++T    V   G N    LG GD      PK +  L  +++ S+    +GP ++L  T +
Sbjct: 36  YVTDNDEVFVFGLNYSNCLGTGDNQSTLVPKKLEALCGKKIKSL-SYGSGP-HVLLTTED 93

Query: 288 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 347
           GVVY++G      LG+G  +  + P  + T       V+ V+ G  H +AL + G ++ W
Sbjct: 94  GVVYAWGHNGYSQLGNGTTNQGIAPVQVCT-NLLIKQVIEVACGSHHSMALAADGELFAW 152

Query: 348 GKGYCGALGHGDEIDKTLPEPLSS-LKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGS 406
           G   CG +G G   ++  P  +++ L +   V +   +  +  ++D+G VYG+G+ G G 
Sbjct: 153 GYNNCGQVGSGSTANQPTPRKVTNCLHTKRVVNIACGQTSSMAVLDSGEVYGWGYNGNGQ 212

Query: 407 LGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDT 466
           LG  + G     L P  + +L    V+QI  G  HT+ +TD G L+ +G N   QLG  +
Sbjct: 213 LGLGNNG---NQLTPVRVAALHGMCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGS 269

Query: 467 LRGCLEPTEIFIQE 480
               L PT+I +++
Sbjct: 270 KNNLLSPTQIMVEK 283



 Score = 92.4 bits (228), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 71/252 (28%), Positives = 116/252 (46%), Gaps = 6/252 (2%)

Query: 171 SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
           S N A +V  + +VF  G N S C G  D N+    P+ +EAL G   K ++ G      
Sbjct: 30  SANEAIYVTDNDEVFVFGLNYSNCLGTGD-NQSTLVPKKLEALCGKKIKSLSYGSGPHVL 88

Query: 231 LTIR-GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 289
           LT   G V+  G N + QLG+G T     P  +     +  V+++A G  + +A+  +G 
Sbjct: 89  LTTEDGVVYAWGHNGYSQLGNGTTNQGIAPVQVCTNLLIKQVIEVACGSHHSMALAADGE 148

Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 349
           ++++G  +   +G G   ++  PR +         VV ++ G    +A+  SG VY WG 
Sbjct: 149 LFAWGYNNCGQVGSGSTANQPTPRKVTNCLHTK-RVVNIACGQTSSMAVLDSGEVYGWGY 207

Query: 350 GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGF 409
              G LG G+  ++  P  +++L      Q+      T  L D G +Y +G   +G LG 
Sbjct: 208 NGNGQLGLGNNGNQLTPVRVAALHGMCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLG- 266

Query: 410 PDRGVSDKVLRP 421
              G  + +L P
Sbjct: 267 --TGSKNNLLSP 276



 Score = 82.4 bits (202), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 73/286 (25%), Positives = 115/286 (40%), Gaps = 5/286 (1%)

Query: 117 TTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS-ASENHA 175
           T+      +  N  VF  G +    LG G   +  V   ++       +  +S  S  H 
Sbjct: 29  TSANEAIYVTDNDEVFVFGLNYSNCLGTGDNQSTLVP-KKLEALCGKKIKSLSYGSGPHV 87

Query: 176 AFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRG 235
               + G V+  G N     G+  TN+ I   ++   L      +V  G + +  L   G
Sbjct: 88  LLTTEDGVVYAWGHNGYSQLGNGTTNQGIAPVQVCTNLLIKQVIEVACGSHHSMALAADG 147

Query: 236 HVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 295
            +   G N  GQ+G G T ++PTP+ +        VV IA G +  +AV  +G VY +G 
Sbjct: 148 ELFAWGYNNCGQVGSGSTANQPTPRKVTNCLHTKRVVNIACGQTSSMAVLDSGEVYGWGY 207

Query: 296 GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGAL 355
             N  LG G   ++L P  +      G+ V ++  G  H +AL   G +Y WG    G L
Sbjct: 208 NGNGQLGLGNNGNQLTPVRVAALH--GMCVNQIVCGYAHTLALTDEGLLYAWGANTYGQL 265

Query: 356 GHGDEIDKTLPEPLSSLKSH-LAVQVCARKRKTFVLVDTGSVYGFG 400
           G G + +   P  +   K   + +  C     +      G VY +G
Sbjct: 266 GTGSKNNLLSPTQIMVEKERVIEIAACHSTHTSAAKTQGGHVYMWG 311



 Score = 62.8 bits (151), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 55/184 (29%), Positives = 86/184 (46%), Gaps = 6/184 (3%)

Query: 114 MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +++  G +H++ L ++  +F+ G + CG +G G    Q       N      VV ++  +
Sbjct: 131 IEVACGSHHSMALAADGELFAWGYNNCGQVGSGSTANQPTPRKVTNCLHTKRVVNIACGQ 190

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
             +  VL SG+V+  G N +   G    N     P  V AL G+   Q+  G   T  LT
Sbjct: 191 TSSMAVLDSGEVYGWGYNGNGQLG-LGNNGNQLTPVRVAALHGMCVNQIVCGYAHTLALT 249

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPS--YMLAVTGNGVV 290
             G ++  G+NT+GQLG G   +  +P  I  + E   V++IAA  S     A T  G V
Sbjct: 250 DEGLLYAWGANTYGQLGTGSKNNLLSPTQI--MVEKERVIEIAACHSTHTSAAKTQGGHV 307

Query: 291 YSFG 294
           Y +G
Sbjct: 308 YMWG 311


>gi|357166571|ref|XP_003580754.1| PREDICTED: protein RCC2-like [Brachypodium distachyon]
          Length = 547

 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 105/350 (30%), Positives = 163/350 (46%), Gaps = 40/350 (11%)

Query: 125 LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQV 184
           L ++   ++ G +  G LGHG +T Q    T ++  S   +++ S  +NH   V   G+ 
Sbjct: 85  LGADGRCYTWGRNEKGQLGHG-DTVQRDLPTIVSELSKYKIIKASIGKNHTVVVTDDGKA 143

Query: 185 FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPC--KQVTA---GLNFTGFLT-IRGH-V 237
           F+ G N     G       I      E L  VPC   +VTA   G +FT +L+ + G  +
Sbjct: 144 FSFGHNKYGQLGTGSLRNEI------ETLP-VPCLVTEVTAAVCGGDFTVWLSSVEGSSI 196

Query: 238 HTCGSNTHGQLGHG-----DTLD---------RPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
            T G   +GQLGHG     +T D         +P P++IA L E  ++V++A G ++ +A
Sbjct: 197 LTAGLPQYGQLGHGTDNEYNTKDSSVKLSYDPQPRPRAIAVLSEK-TIVKVACGTNHTVA 255

Query: 284 VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVR--VSAGDEHVVALDSS 341
           V  +G VY++G G    LGH EQ DE QPR ++ F++  +      VSAG          
Sbjct: 256 VDSSGFVYTWGFGGYGRLGHREQKDEWQPRLVEVFQKNNVLPPNAIVSAGSASCACTAGG 315

Query: 342 GYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGW 401
           G +Y WGK        GD  D   P+PL  L S   ++  A      V+    S   +G 
Sbjct: 316 GQLYMWGK----MKNTGD--DWMYPKPLMDL-SGWNIRCMASGNMHHVVGADDSCISWGA 368

Query: 402 MGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRL 451
             +G LG+   G       P+ +DSL   HV+ +  G   ++++ DR ++
Sbjct: 369 AQYGELGYGPNGQKSSA-NPKKVDSLEGMHVTSVGCGYGMSLIIVDRAKI 417



 Score = 75.5 bits (184), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 82/313 (26%), Positives = 131/313 (41%), Gaps = 39/313 (12%)

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
           H   +   G+ +T G N     GH DT +    P +V  L      + + G N T  +T 
Sbjct: 81  HCVALGADGRCYTWGRNEKGQLGHGDTVQRDL-PTIVSELSKYKIIKASIGKNHTVVVTD 139

Query: 234 RGHVHTCGSNTHGQLGHGDTLDR----PTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 289
            G   + G N +GQLG G   +     P P  +    EV + V       ++ +V G+ +
Sbjct: 140 DGKAFSFGHNKYGQLGTGSLRNEIETLPVPCLVT---EVTAAVCGGDFTVWLSSVEGSSI 196

Query: 290 VYSFGSGSNFCLGHGEQHD--------------ELQPRAIQTFRRKGIHVVRVSAGDEHV 335
           + + G      LGHG  ++              + +PRAI     K I  V+V+ G  H 
Sbjct: 197 L-TAGLPQYGQLGHGTDNEYNTKDSSVKLSYDPQPRPRAIAVLSEKTI--VKVACGTNHT 253

Query: 336 VALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQ----VCARKRKTFVLV 391
           VA+DSSG+VYTWG G  G LGH ++ D+  P  +   + +  +     V A         
Sbjct: 254 VAVDSSGFVYTWGFGGYGRLGHREQKDEWQPRLVEVFQKNNVLPPNAIVSAGSASCACTA 313

Query: 392 DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRL 451
             G +Y +G M         +   D  + P+ L  L   ++  +++G  H VV  D    
Sbjct: 314 GGGQLYMWGKM---------KNTGDDWMYPKPLMDLSGWNIRCMASGNMHHVVGADD-SC 363

Query: 452 FGFGDNERAQLGH 464
             +G  +  +LG+
Sbjct: 364 ISWGAAQYGELGY 376



 Score = 61.6 bits (148), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 37/110 (33%), Positives = 56/110 (50%), Gaps = 4/110 (3%)

Query: 301 LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE--HVVALDSSGYVYTWGKGYCGALGHG 358
           +G G Q + L P  ++     G+ +  V++G    H VAL + G  YTWG+   G LGHG
Sbjct: 48  VGGGIQGNLLSPSRLRPLV--GVDIRSVASGCTAFHCVALGADGRCYTWGRNEKGQLGHG 105

Query: 359 DEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLG 408
           D + + LP  +S L  +  ++    K  T V+ D G  + FG   +G LG
Sbjct: 106 DTVQRDLPTIVSELSKYKIIKASIGKNHTVVVTDDGKAFSFGHNKYGQLG 155



 Score = 49.3 bits (116), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 33/90 (36%), Positives = 44/90 (48%), Gaps = 5/90 (5%)

Query: 394 GSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFG 453
           G  Y +G    G LG  D    D    P I+  L  + + + S G  HTVVVTD G+ F 
Sbjct: 89  GRCYTWGRNEKGQLGHGDTVQRD---LPTIVSELSKYKIIKASIGKNHTVVVTDDGKAFS 145

Query: 454 FGDNERAQLGHDTLRGCLE--PTEIFIQEM 481
           FG N+  QLG  +LR  +E  P    + E+
Sbjct: 146 FGHNKYGQLGTGSLRNEIETLPVPCLVTEV 175


>gi|444910521|ref|ZP_21230705.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
 gi|444719140|gb|ELW59939.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
          Length = 715

 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 102/369 (27%), Positives = 171/369 (46%), Gaps = 22/369 (5%)

Query: 114 MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           + I  G +HTL L SN +V+S G +  G LG+G   TQ  +   +N   A   V +SA  
Sbjct: 157 VAIAAGTHHTLALKSNGTVWSWGLNSSGQLGNGTLATQSAAVQAVNLTDA---VAISAGA 213

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            H+  +  +G V + G N+    G+  T      P  V  L  +  K + AG N +  L 
Sbjct: 214 AHSLALRANGAVVSWGANTYGQLGNGTTTTSA-SPVGVSGLNNI--KSLAAGGNHSLALK 270

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV-TGNGVVY 291
             G V   G N +GQ+G+G T +  +P +++ L     V  ++AG S+  A+ + NGV++
Sbjct: 271 SDGTVTAWGYNAYGQVGNGATANVLSPIAVSTLS---GVTAVSAGVSHSHAIGSSNGVIW 327

Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 351
            +G  +   LG+  + +   P  I      G+    V+ G +H + +   G V+ WG   
Sbjct: 328 GWGLNTYGGLGNNTKVNRSTPGTI--LLTSGLQ--GVAGGAQHTIYVKGDGTVWAWGSNT 383

Query: 352 CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 411
            G +G G  + +  P  LS+L   +AV   A    +  L   G+V+ +G    G LG  D
Sbjct: 384 YGQIGDGTPLRRLTPVQLSTLTGIIAV--AAGANHSLALAANGTVFAWGRNNHGQLG--D 439

Query: 412 RGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCL 471
              +++ L P  + +L    +  ++ G  H++ +   G ++ +G N   QLG +T    L
Sbjct: 440 GSTTNRSL-PTQVPNLTG--IVALAAGATHSLALRFDGTVYAWGRNHLGQLGDETCTDRL 496

Query: 472 EPTEIFIQE 480
            P  +   E
Sbjct: 497 SPVAVHYLE 505



 Score =  110 bits (275), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 102/351 (29%), Positives = 168/351 (47%), Gaps = 22/351 (6%)

Query: 114 MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           + I+ G  H+L L +N +V S G++  G LG+G  TT   S + +      ++  ++A  
Sbjct: 207 VAISAGAAHSLALRANGAVVSWGANTYGQLGNGTTTT---SASPVGVSGLNNIKSLAAGG 263

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFT-GFL 231
           NH+  +   G V   G N+    G+  T   +  P  V  L GV    V+AG++ +    
Sbjct: 264 NHSLALKSDGTVTAWGYNAYGQVGNGATAN-VLSPIAVSTLSGVTA--VSAGVSHSHAIG 320

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
           +  G +   G NT+G LG+   ++R TP +I  L   G +  +A G  + + V G+G V+
Sbjct: 321 SSNGVIWGWGLNTYGGLGNNTKVNRSTPGTI--LLTSG-LQGVAGGAQHTIYVKGDGTVW 377

Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 351
           ++GS +   +G G     L P  + T       ++ V+AG  H +AL ++G V+ WG+  
Sbjct: 378 AWGSNTYGQIGDGTPLRRLTPVQLSTLTG----IIAVAAGANHSLALAANGTVFAWGRNN 433

Query: 352 CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 411
            G LG G   +++LP  + +L     V + A    +  L   G+VY +G    G LG  D
Sbjct: 434 HGQLGDGSTTNRSLPTQVPNLTG--IVALAAGATHSLALRFDGTVYAWGRNHLGQLG--D 489

Query: 412 RGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQL 462
              +D+ L P  +  L    V  IS G  H++ +   G  F +G +E  QL
Sbjct: 490 ETCTDR-LSPVAVHYLE--KVVAISAGDNHSLAIHQNGTAFAWGSDEHGQL 537



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 99/359 (27%), Positives = 168/359 (46%), Gaps = 25/359 (6%)

Query: 125 LISNSSVFSCGSSLCGVLGHGPETTQCV------SFTRINFPSAAHVVQVSASENHAAFV 178
           L S+ +V+S G +    LG+    TQ +      SF  I  P    VV ++A  +H   +
Sbjct: 111 LKSDGTVWSWGYNGNSALGNASPATQKLPAQVQQSFGGILSP-LTDVVAIAAGTHHTLAL 169

Query: 179 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVH 238
             +G V++ G NSS   G         +   V+A+       ++AG   +  L   G V 
Sbjct: 170 KSNGTVWSWGLNSS---GQLGNGTLATQSAAVQAVNLTDAVAISAGAAHSLALRANGAVV 226

Query: 239 TCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
           + G+NT+GQLG+G T    +P  ++ L  + S   +AAG ++ LA+  +G V ++G  + 
Sbjct: 227 SWGANTYGQLGNGTTTTSASPVGVSGLNNIKS---LAAGGNHSLALKSDGTVTAWGYNAY 283

Query: 299 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS-GYVYTWGKGYCGALGH 357
             +G+G   + L P A+ T       V  VSAG  H  A+ SS G ++ WG    G LG+
Sbjct: 284 GQVGNGATANVLSPIAVSTLSG----VTAVSAGVSHSHAIGSSNGVIWGWGLNTYGGLGN 339

Query: 358 GDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDK 417
             +++++ P  +  L S L   V    + T  +   G+V+ +G   +G +G    G   +
Sbjct: 340 NTKVNRSTPGTIL-LTSGLQ-GVAGGAQHTIYVKGDGTVWAWGSNTYGQIG---DGTPLR 394

Query: 418 VLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 476
            L P  L +L    +  ++ G  H++ +   G +F +G N   QLG  +      PT++
Sbjct: 395 RLTPVQLSTLTG--IIAVAAGANHSLALAANGTVFAWGRNNHGQLGDGSTTNRSLPTQV 451



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 116/437 (26%), Positives = 190/437 (43%), Gaps = 31/437 (7%)

Query: 56  LVDLAASQLCALHSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNMQ 115
           L  +A S L  + ++ AG+S +  I   N     W   L     + +++ +  ++ G + 
Sbjct: 295 LSPIAVSTLSGVTAVSAGVSHSHAIGSSNGVIWGWG--LNTYGGLGNNTKVNRSTPGTIL 352

Query: 116 ITTG-------RYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ 167
           +T+G         HT+ +  + +V++ GS+  G +G G   T     T +   +   ++ 
Sbjct: 353 LTSGLQGVAGGAQHTIYVKGDGTVWAWGSNTYGQIGDG---TPLRRLTPVQLSTLTGIIA 409

Query: 168 VSASENHAAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVPCKQVTAGLN 226
           V+A  NH+  +  +G VF  G N+    G    TNR +  P  V  L G+    + AG  
Sbjct: 410 VAAGANHSLALAANGTVFAWGRNNHGQLGDGSTTNRSL--PTQVPNLTGIVA--LAAGAT 465

Query: 227 FTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTG 286
            +  L   G V+  G N  GQLG     DR +P ++  LE+V   V I+AG ++ LA+  
Sbjct: 466 HSLALRFDGTVYAWGRNHLGQLGDETCTDRLSPVAVHYLEKV---VAISAGDNHSLAIHQ 522

Query: 287 NGVVYSFGSGSNFCL-GHGEQHDELQPRAIQTFR-RKGIHVVRVSAGDEHVVALDSSGYV 344
           NG  +++GS  +  L   G       P   Q     KGI    ++AG  H + L+++G  
Sbjct: 523 NGTAFAWGSDEHGQLCDSGSGSGRFSPLISQIPGIVKGI---GIAAGANHTLLLEANGTA 579

Query: 345 YTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGF 404
           +  G    G LG G   DK+ P P+++L +  A ++ A    +  L   G+V  +G    
Sbjct: 580 WACGDNLYGQLGDGTTTDKSAPVPITTLTN--AARLAAGGNTSAALTTNGTVSTWGLNSS 637

Query: 405 GSLG---FPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQ 461
           G LG      R     VLR           V+ +  G  H   V   G +  +G N+  Q
Sbjct: 638 GQLGDNTTASRTTIAPVLRTVYPTVEVFSGVASLGAGTAHLTAVKTDGYVHSWGLNDSGQ 697

Query: 462 LGHDTLRGCLEPTEIFI 478
           +G  TL     PT   +
Sbjct: 698 IGDGTLVNRPLPTAALL 714



 Score = 99.0 bits (245), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 97/372 (26%), Positives = 164/372 (44%), Gaps = 24/372 (6%)

Query: 112 GNMQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSA 170
           G + +  G YH+L L S+ +V++ G +  G LG    TT+      +N      V+ ++A
Sbjct: 47  GVISVAAGYYHSLALKSDGTVWAWGLNTYGNLGDNTTTTRTKPVQVLNLTG---VIAIAA 103

Query: 171 SENHAAFVLQS-GQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGV--PCKQV---TAG 224
            + + +F L+S G V++ G N +   G+          ++ ++  G+  P   V    AG
Sbjct: 104 -DYYQSFALKSDGTVWSWGYNGNSALGNASPATQKLPAQVQQSFGGILSPLTDVVAIAAG 162

Query: 225 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 284
            + T  L   G V + G N+ GQLG+G    +        L +    V I+AG ++ LA+
Sbjct: 163 THHTLALKSNGTVWSWGLNSSGQLGNGTLATQSAAVQAVNLTDA---VAISAGAAHSLAL 219

Query: 285 TGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
             NG V S+G+ +   LG+G       P  +        ++  ++AG  H +AL S G V
Sbjct: 220 RANGAVVSWGANTYGQLGNGTTTTSASPVGVSGLN----NIKSLAAGGNHSLALKSDGTV 275

Query: 345 YTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGF 404
             WG    G +G+G   +   P  +S+L    AV          +    G ++G+G   +
Sbjct: 276 TAWGYNAYGQVGNGATANVLSPIAVSTLSGVTAVSAGVSHSHA-IGSSNGVIWGWGLNTY 334

Query: 405 GSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 464
           G LG      + KV R      L    +  ++ G  HT+ V   G ++ +G N   Q+G 
Sbjct: 335 GGLGN-----NTKVNRSTPGTILLTSGLQGVAGGAQHTIYVKGDGTVWAWGSNTYGQIGD 389

Query: 465 DTLRGCLEPTEI 476
            T    L P ++
Sbjct: 390 GTPLRRLTPVQL 401



 Score = 84.0 bits (206), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 85/308 (27%), Positives = 128/308 (41%), Gaps = 19/308 (6%)

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
           H   V Q G V+  G N     G+  T      P  V  L GV    V AG   +  L  
Sbjct: 7   HTLAVRQDGTVWASGYNYHGELGN-GTATDSLSPVQVSNLTGV--ISVAAGYYHSLALKS 63

Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
            G V   G NT+G LG   T  R  P  +  L     V+ IAA      A+  +G V+S+
Sbjct: 64  DGTVWAWGLNTYGNLGDNTTTTRTKPVQVLNLT---GVIAIAADYYQSFALKSDGTVWSW 120

Query: 294 GSGSNFCLGHGEQHDELQPRAIQTFRRKGI-----HVVRVSAGDEHVVALDSSGYVYTWG 348
           G   N  LG+     +  P  +Q     GI      VV ++AG  H +AL S+G V++WG
Sbjct: 121 GYNGNSALGNASPATQKLPAQVQQ-SFGGILSPLTDVVAIAAGTHHTLALKSNGTVWSWG 179

Query: 349 KGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLG 408
               G LG+G    ++      +L    AV + A    +  L   G+V  +G   +G LG
Sbjct: 180 LNSSGQLGNGTLATQSAAVQAVNLTD--AVAISAGAAHSLALRANGAVVSWGANTYGQLG 237

Query: 409 FPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLR 468
               G +     P  +  L  +++  ++ G  H++ +   G +  +G N   Q+G+    
Sbjct: 238 ---NGTTTTSASPVGVSGL--NNIKSLAAGGNHSLALKSDGTVTAWGYNAYGQVGNGATA 292

Query: 469 GCLEPTEI 476
             L P  +
Sbjct: 293 NVLSPIAV 300



 Score = 73.2 bits (178), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 58/196 (29%), Positives = 93/196 (47%), Gaps = 13/196 (6%)

Query: 277 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVV 336
           G  + LAV  +G V++ G   +  LG+G   D L P  +Q     G  V+ V+AG  H +
Sbjct: 4   GAHHTLAVRQDGTVWASGYNYHGELGNGTATDSLSP--VQVSNLTG--VISVAAGYYHSL 59

Query: 337 ALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSV 396
           AL S G V+ WG    G L  GD    T  +P+  L     + + A   ++F L   G+V
Sbjct: 60  ALKSDGTVWAWGLNTYGNL--GDNTTTTRTKPVQVLNLTGVIAIAADYYQSFALKSDGTV 117

Query: 397 YGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRA-----HHVSQISTGLYHTVVVTDRGRL 451
           + +G+ G  +LG  +   + + L  ++  S          V  I+ G +HT+ +   G +
Sbjct: 118 WSWGYNGNSALG--NASPATQKLPAQVQQSFGGILSPLTDVVAIAAGTHHTLALKSNGTV 175

Query: 452 FGFGDNERAQLGHDTL 467
           + +G N   QLG+ TL
Sbjct: 176 WSWGLNSSGQLGNGTL 191


>gi|403356078|gb|EJY77629.1| Hect E3 ubiquitin ligase [Oxytricha trifallax]
          Length = 1178

 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 89/306 (29%), Positives = 147/306 (48%), Gaps = 40/306 (13%)

Query: 207 PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLD----------R 256
           P  ++ L+     QV  G   T  + I+G+V++ G++  GQLG     D          +
Sbjct: 14  PLEIDMLRNKGIYQVAGGDGHTVAVDIKGNVYSWGASACGQLGLASMKDLPTDVEGYPYQ 73

Query: 257 PTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ----HDE--- 309
           PTP+ I  L+ V  V+QIA G ++ +A+T +G +YS+G G    LGH +      DE   
Sbjct: 74  PTPRIIELLQSV-KVIQIACGDAHTVALTQDGKLYSWGGGGCGQLGHPDTSAMPKDEDGC 132

Query: 310 -LQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEID------ 362
             QP+       K + V +V+ G  H VA+ ++G++Y+WG G CG LGH D         
Sbjct: 133 PYQPKPKLIVVLKNLEVKQVACGKAHTVAVLNNGHLYSWGAGACGQLGHPDTSSFPADED 192

Query: 363 ----KTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKV 418
               + +P  +++LK    +        T VL D G +Y FG    G LGF +  +S   
Sbjct: 193 GYPYQPIPRCVTALKPFKLIHASCGDVHTMVLTDQGEIYCFGGGSCGQLGFGN--ISQMP 250

Query: 419 LR---------PRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG 469
           L          P+ ++SL+   +  +S G  H++ ++  G ++ +G+    QLG D +R 
Sbjct: 251 LDVDSCPFMPVPKKIESLQGIFIVSLSCGDSHSMALSREGHVYAWGEATYGQLGLDDIRD 310

Query: 470 CLEPTE 475
             + T+
Sbjct: 311 LPKNTD 316



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 93/350 (26%), Positives = 152/350 (43%), Gaps = 56/350 (16%)

Query: 110 SAGNMQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHG-----PETTQCVSFTR----INF 159
           + G  Q+  G  HT+ +    +V+S G+S CG LG       P   +   +      I  
Sbjct: 22  NKGIYQVAGGDGHTVAVDIKGNVYSWGASACGQLGLASMKDLPTDVEGYPYQPTPRIIEL 81

Query: 160 PSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTN-----------RPIFRPR 208
             +  V+Q++  + H   + Q G++++ G       GH DT+           +P  +P+
Sbjct: 82  LQSVKVIQIACGDAHTVALTQDGKLYSWGGGGCGQLGHPDTSAMPKDEDGCPYQP--KPK 139

Query: 209 LVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLD----------RPT 258
           L+  LK +  KQV  G   T  +   GH+++ G+   GQLGH DT            +P 
Sbjct: 140 LIVVLKNLEVKQVACGKAHTVAVLNNGHLYSWGAGACGQLGHPDTSSFPADEDGYPYQPI 199

Query: 259 PKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGE-QHDELQ------ 311
           P+ +  L+    ++  + G  + + +T  G +Y FG GS   LG G      L       
Sbjct: 200 PRCVTALKPF-KLIHASCGDVHTMVLTDQGEIYCFGGGSCGQLGFGNISQMPLDVDSCPF 258

Query: 312 ---PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEID------ 362
              P+ I++ +  GI +V +S GD H +AL   G+VY WG+   G LG  D  D      
Sbjct: 259 MPVPKKIESLQ--GIFIVSLSCGDSHSMALSREGHVYAWGEATYGQLGLDDIRDLPKNTD 316

Query: 363 ----KTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLG 408
               +  P+ + +L +   V +   +  T  L + G +Y FG    G LG
Sbjct: 317 NKPYQPFPQKVVALMNKKIVAISCGETHTLALTEGGHLYSFGGNTCGQLG 366



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 89/293 (30%), Positives = 135/293 (46%), Gaps = 36/293 (12%)

Query: 207 PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLD----------R 256
           PR++E L+ V   Q+  G   T  LT  G +++ G    GQLGH DT            +
Sbjct: 76  PRIIELLQSVKVIQIACGDAHTVALTQDGKLYSWGGGGCGQLGHPDTSAMPKDEDGCPYQ 135

Query: 257 PTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH----DE--- 309
           P PK I  L+ +  V Q+A G ++ +AV  NG +YS+G+G+   LGH +      DE   
Sbjct: 136 PKPKLIVVLKNL-EVKQVACGKAHTVAVLNNGHLYSWGAGACGQLGHPDTSSFPADEDGY 194

Query: 310 -LQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGD------EID 362
             QP        K   ++  S GD H + L   G +Y +G G CG LG G+      ++D
Sbjct: 195 PYQPIPRCVTALKPFKLIHASCGDVHTMVLTDQGEIYCFGGGSCGQLGFGNISQMPLDVD 254

Query: 363 K----TLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD-----RG 413
                 +P+ + SL+    V +      +  L   G VY +G   +G LG  D     + 
Sbjct: 255 SCPFMPVPKKIESLQGIFIVSLSCGDSHSMALSREGHVYAWGEATYGQLGLDDIRDLPKN 314

Query: 414 VSDKVLRP--RILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 464
             +K  +P  + + +L    +  IS G  HT+ +T+ G L+ FG N   QLG 
Sbjct: 315 TDNKPYQPFPQKVVALMNKKIVAISCGETHTLALTEGGHLYSFGGNTCGQLGQ 367



 Score = 77.8 bits (190), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 72/236 (30%), Positives = 111/236 (47%), Gaps = 32/236 (13%)

Query: 256 RPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHD------- 308
           +P P  I  L   G + Q+A G  + +AV   G VYS+G+ +   LG     D       
Sbjct: 11  QPHPLEIDMLRNKG-IYQVAGGDGHTVAVDIKGNVYSWGASACGQLGLASMKDLPTDVEG 69

Query: 309 ---ELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGD------ 359
              +  PR I+  +   + V++++ GD H VAL   G +Y+WG G CG LGH D      
Sbjct: 70  YPYQPTPRIIELLQ--SVKVIQIACGDAHTVALTQDGKLYSWGGGGCGQLGHPDTSAMPK 127

Query: 360 EID----KTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD---- 411
           + D    +  P+ +  LK+    QV   K  T  +++ G +Y +G    G LG PD    
Sbjct: 128 DEDGCPYQPKPKLIVVLKNLEVKQVACGKAHTVAVLNNGHLYSWGAGACGQLGHPDTSSF 187

Query: 412 ----RGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 463
                G   + + PR + +L+   +   S G  HT+V+TD+G ++ FG     QLG
Sbjct: 188 PADEDGYPYQPI-PRCVTALKPFKLIHASCGDVHTMVLTDQGEIYCFGGGSCGQLG 242


>gi|301094633|ref|XP_002896421.1| regulator of chromosome condensation (RCC1)-like protein
           [Phytophthora infestans T30-4]
 gi|262109510|gb|EEY67562.1| regulator of chromosome condensation (RCC1)-like protein
           [Phytophthora infestans T30-4]
          Length = 1289

 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 93/290 (32%), Positives = 137/290 (47%), Gaps = 37/290 (12%)

Query: 204 IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLG------HGDTLDR- 256
           + RP+ V    G P  QV  G     +LT  G V++ G N   ++       H  TL   
Sbjct: 465 VLRPKHVSLANGQPIVQVACGGEHLLYLTSTGDVYSYGDNEDKKVAAVTVATHTSTLPDN 524

Query: 257 ------PTPKSIAP--LEEVG--------SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 300
                  T   +AP  +EE+         ++  +A G  + LA+T  G +Y++GSG +  
Sbjct: 525 ESTRVVSTSSFLAPHLVEELALEKALHRTTIAMVACGAQHSLAITDAGELYTWGSGEDGR 584

Query: 301 LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 360
           LGHG+  D   PR + +  R+   VV  S G  H   L + G V+T+G+G  G LG GD 
Sbjct: 585 LGHGDMRDRAVPRKVMSLLRES--VVSASCGGAHTAVLTAKGSVFTFGRGRNGRLGLGDN 642

Query: 361 IDKTLPEPLSSLK--SHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGS--LGFPDRGVSD 416
             +  P P+      + +++ VC     T  L   GSV+ +G  G G   LG+ DR   D
Sbjct: 643 KWRDTPHPIVGFPQGTSISLVVCGWN-FTAALDRQGSVFTWGKTGEGQCGLGYVDR---D 698

Query: 417 KVLRPRILDSLR---AHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 463
           +V+ PR +D LR      V  ++ G  HTVV+T  G L+ +G  E  QLG
Sbjct: 699 QVV-PRCVDKLRDVAGSSVVDVACGYTHTVVLTASGELYSWGLGEYGQLG 747



 Score =  105 bits (263), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 113/422 (26%), Positives = 177/422 (41%), Gaps = 58/422 (13%)

Query: 99  SVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPE----TTQCVSF 154
           SVE + D+VE   G+              +++     SS   V G  P     T   +  
Sbjct: 423 SVEDAVDVVELEEGD--------------DATQVEEPSSCMYVWGRPPSLEGGTPLVLRP 468

Query: 155 TRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDN-----SSFCCGHRDTNRP------ 203
             ++  +   +VQV+    H  ++  +G V++ GDN     ++       +  P      
Sbjct: 469 KHVSLANGQPIVQVACGGEHLLYLTSTGDVYSYGDNEDKKVAAVTVATHTSTLPDNESTR 528

Query: 204 ------IFRPRLVE------ALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHG 251
                    P LVE      AL       V  G   +  +T  G ++T GS   G+LGHG
Sbjct: 529 VVSTSSFLAPHLVEELALEKALHRTTIAMVACGAQHSLAITDAGELYTWGSGEDGRLGHG 588

Query: 252 DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQ 311
           D  DR  P+ +  L    SVV  + G ++   +T  G V++FG G N  LG G+      
Sbjct: 589 DMRDRAVPRKVMSLLR-ESVVSASCGGAHTAVLTAKGSVFTFGRGRNGRLGLGDNKWRDT 647

Query: 312 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK---GYCGALGHGDEIDKTLPEP 368
           P  I  F  +G  +  V  G     ALD  G V+TWGK   G CG LG+ D  D+ +P  
Sbjct: 648 PHPIVGF-PQGTSISLVVCGWNFTAALDRQGSVFTWGKTGEGQCG-LGYVDR-DQVVPRC 704

Query: 369 LSSLKS---HLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD--RGVSDKVLRPRI 423
           +  L+       V V      T VL  +G +Y +G   +G LG  D  + +  +V  P  
Sbjct: 705 VDKLRDVAGSSVVDVACGYTHTVVLTASGELYSWGLGEYGQLGTGDVYQPLPARVQLP-- 762

Query: 424 LDSLRA-HHVSQISTGLYHTVVVTDRGRLFGFGDNERAQ--LGHDTLRGCLEPTEIFIQE 480
            D+L A   ++++  G +H++  T++  +F +G N      LGH   +   E  + F  +
Sbjct: 763 ADALCAPDQLARVYCGAFHSIATTEQRVMFAWGLNSYGACGLGHTANKDKPERIDCFSSQ 822

Query: 481 ME 482
            E
Sbjct: 823 TE 824



 Score = 84.7 bits (208), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 81/298 (27%), Positives = 130/298 (43%), Gaps = 18/298 (6%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           +  V+    H+  +  +G+++T G       GH D  R    PR V +L        + G
Sbjct: 555 IAMVACGAQHSLAITDAGELYTWGSGEDGRLGHGDM-RDRAVPRKVMSLLRESVVSASCG 613

Query: 225 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 284
              T  LT +G V T G   +G+LG GD   R TP  I    +  S+  +  G ++  A+
Sbjct: 614 GAHTAVLTAKGSVFTFGRGRNGRLGLGDNKWRDTPHPIVGFPQGTSISLVVCGWNFTAAL 673

Query: 285 TGNGVVYSFG-SGSNFC-LGHGEQHDELQPRAIQTFRR-KGIHVVRVSAGDEHVVALDSS 341
              G V+++G +G   C LG+ ++ D++ PR +   R   G  VV V+ G  H V L +S
Sbjct: 674 DRQGSVFTWGKTGEGQCGLGYVDR-DQVVPRCVDKLRDVAGSSVVDVACGYTHTVVLTAS 732

Query: 342 GYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFV-------LVDTG 394
           G +Y+WG G  G LG GD     + +PL +     A  +CA  +   V       +  T 
Sbjct: 733 GELYSWGLGEYGQLGTGD-----VYQPLPARVQLPADALCAPDQLARVYCGAFHSIATTE 787

Query: 395 SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLF 452
               F W G  S G    G +    +P  +D   +     ++ G  +T+ +     L+
Sbjct: 788 QRVMFAW-GLNSYGACGLGHTANKDKPERIDCFSSQTELVVACGHKYTIALEVNASLY 844



 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 64/235 (27%), Positives = 103/235 (43%), Gaps = 10/235 (4%)

Query: 119 GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
           G +  +L +  SVF+ G    G LG G    +      + FP    +  V    N  A +
Sbjct: 614 GAHTAVLTAKGSVFTFGRGRNGRLGLGDNKWRDTPHPIVGFPQGTSISLVVCGWNFTAAL 673

Query: 179 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVP---CKQVTAGLNFTGFLTIRG 235
            + G VFT G      CG    +R    PR V+ L+ V       V  G   T  LT  G
Sbjct: 674 DRQGSVFTWGKTGEGQCGLGYVDRDQVVPRCVDKLRDVAGSSVVDVACGYTHTVVLTASG 733

Query: 236 HVHTCGSNTHGQLGHGDTLDRPTPKSIA-PLEEVGSVVQIA---AGPSYMLAVTGNGVVY 291
            +++ G   +GQLG GD   +P P  +  P + + +  Q+A    G  + +A T   V++
Sbjct: 734 ELYSWGLGEYGQLGTGDVY-QPLPARVQLPADALCAPDQLARVYCGAFHSIATTEQRVMF 792

Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYT 346
           ++G  S    G G   ++ +P  I  F  +   V  V+ G ++ +AL+ +  +YT
Sbjct: 793 AWGLNSYGACGLGHTANKDKPERIDCFSSQTELV--VACGHKYTIALEVNASLYT 845


>gi|428164106|gb|EKX33145.1| hypothetical protein GUITHDRAFT_120666 [Guillardia theta CCMP2712]
          Length = 606

 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 87/255 (34%), Positives = 123/255 (48%), Gaps = 13/255 (5%)

Query: 112 GNMQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSF-TRINFPSAAHVVQVS 169
           G + ++ G  H   I S   +F+ G  LC     G ++ + V + TR++F     +V V+
Sbjct: 214 GIIDVSYGADHGAAIDSTGKLFTWG--LCDHGRLGLKSGKDVPYPTRVDFLKDEVIVDVT 271

Query: 170 ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
                +A +    +VFT G  S    GH + +   + PR V AL  +P  QV  G     
Sbjct: 272 CGMYSSACISHDMKVFTWGSGSKGQLGHVEKSDE-WLPRSVAALHHIPIVQVALGYEHMA 330

Query: 230 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSI--------APLEEVGSVVQIAAGPSYM 281
            L++ G V+T G   HGQLGHGD     TPK +          + +VGS V +A G S  
Sbjct: 331 ALSLDGDVYTWGEGEHGQLGHGDLNSCSTPKKLLLELENTTGEVADVGSPVLLACGASVT 390

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 341
           L +T  G + SFG      LG GE+    +P  I +        V +SAGDEH  A+ S 
Sbjct: 391 LILTDYGRLISFGMSEFGALGLGEKRLAARPHLITSRIMDKRRFVHLSAGDEHCAAVTSK 450

Query: 342 GYVYTWGKGYCGALG 356
           G VYTWG+G  GA+G
Sbjct: 451 GNVYTWGQGCFGAVG 465



 Score = 86.3 bits (212), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 65/228 (28%), Positives = 108/228 (47%), Gaps = 7/228 (3%)

Query: 262 IAPLEEVGSVVQIAAGPSYM-LAVTGNGVVYSFGSGS--NFCLGHGEQHDELQPRAIQTF 318
           +A L       ++ +GPS + L    +  +Y F  G   N+ LG G+   +  P+ + T 
Sbjct: 149 VAALRHEDPRARVVSGPSALSLQPRRDEAIYLFAWGCSHNYQLGTGQYQAQPFPKLVSTL 208

Query: 319 RRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAV 378
            R G  ++ VS G +H  A+DS+G ++TWG    G LG     D   P  +  LK  + V
Sbjct: 209 TRLGNGIIDVSYGADHGAAIDSTGKLFTWGLCDHGRLGLKSGKDVPYPTRVDFLKDEVIV 268

Query: 379 QVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTG 438
            V      +  +     V+ +G    G LG  ++  SD+ L PR + +L    + Q++ G
Sbjct: 269 DVTCGMYSSACISHDMKVFTWGSGSKGQLGHVEK--SDEWL-PRSVAALHHIPIVQVALG 325

Query: 439 LYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQEMEEDTG 486
             H   ++  G ++ +G+ E  QLGH  L  C  P ++ + E+E  TG
Sbjct: 326 YEHMAALSLDGDVYTWGEGEHGQLGHGDLNSCSTPKKLLL-ELENTTG 372



 Score = 84.7 bits (208), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 79/309 (25%), Positives = 137/309 (44%), Gaps = 22/309 (7%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGH----RDTNRPIFRPRLVEALKGVPCKQ 220
           ++ VS   +H A +  +G++FT G      C H      + + +  P  V+ LK      
Sbjct: 215 IIDVSYGADHGAAIDSTGKLFTWG-----LCDHGRLGLKSGKDVPYPTRVDFLKDEVIVD 269

Query: 221 VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 280
           VT G+  +  ++    V T GS + GQLGH +  D   P+S+A L  +  +VQ+A G  +
Sbjct: 270 VTCGMYSSACISHDMKVFTWGSGSKGQLGHVEKSDEWLPRSVAALHHI-PIVQVALGYEH 328

Query: 281 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGI-------HVVRVSAGDE 333
           M A++ +G VY++G G +  LGHG+ +    P+ +                 V ++ G  
Sbjct: 329 MAALSLDGDVYTWGEGEHGQLGHGDLNSCSTPKKLLLELENTTGEVADVGSPVLLACGAS 388

Query: 334 HVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSS--LKSHLAVQVCARKRKTFVLV 391
             + L   G + ++G    GALG G++     P  ++S  +     V + A       + 
Sbjct: 389 VTLILTDYGRLISFGMSEFGALGLGEKRLAARPHLITSRIMDKRRFVHLSAGDEHCAAVT 448

Query: 392 DTGSVYGFGWMGFGSLGFPDRGV---SDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDR 448
             G+VY +G   FG++G P R          +P  L+          S G  +TV+++  
Sbjct: 449 SKGNVYTWGQGCFGAVGKPARRAYSNPPDCRKPYKLELPLDKRACATSCGGNYTVILSKD 508

Query: 449 GRLFGFGDN 457
           G +   GD+
Sbjct: 509 GCVLVLGDD 517



 Score = 79.7 bits (195), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 78/281 (27%), Positives = 118/281 (41%), Gaps = 55/281 (19%)

Query: 207 PRLVEALK--GVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP 264
           P+LV  L   G     V+ G +    +   G + T G   HG+LG     D P P  +  
Sbjct: 202 PKLVSTLTRLGNGIIDVSYGADHGAAIDSTGKLFTWGLCDHGRLGLKSGKDVPYPTRVDF 261

Query: 265 LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH 324
           L++   +V +  G      ++ +  V+++GSGS   LGH E+ DE  PR++       I 
Sbjct: 262 LKD-EVIVDVTCGMYSSACISHDMKVFTWGSGSKGQLGHVEKSDEWLPRSVAALHH--IP 318

Query: 325 VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARK 384
           +V+V+ G EH+ AL   G VYTWG+G  G LGHGD                  +  C+  
Sbjct: 319 IVQVALGYEHMAALSLDGDVYTWGEGEHGQLGHGD------------------LNSCSTP 360

Query: 385 RKTFVLVD--TGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHT 442
           +K  + ++  TG V   G                    P +L           + G   T
Sbjct: 361 KKLLLELENTTGEVADVG-------------------SPVLL-----------ACGASVT 390

Query: 443 VVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQEMEE 483
           +++TD GRL  FG +E   LG    R    P  I  + M++
Sbjct: 391 LILTDYGRLISFGMSEFGALGLGEKRLAARPHLITSRIMDK 431


>gi|34098426|sp|Q7ZZC8.1|NEK9_XENLA RecName: Full=Serine/threonine-protein kinase Nek9; Short=xNek9;
           AltName: Full=Nercc1 kinase; AltName: Full=Never in
           mitosis A-related kinase 9; Short=NimA-related protein
           kinase 9
 gi|30523244|gb|AAP31900.1| NIMA-family kinase Nercc1 [Xenopus laevis]
          Length = 944

 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 84/275 (30%), Positives = 126/275 (45%), Gaps = 21/275 (7%)

Query: 207 PRLVEALKG-VPCKQVTAGLNFTGFLTIRGHVHTC-----GSNTHGQLGHGDTLDRPTPK 260
           P+ ++  KG    +QV AG      +T+   ++T      GS  HGQLGHGD      PK
Sbjct: 341 PQKLDVFKGGWRARQVCAGDAHFAVVTVEKELYTWVNMQGGSKLHGQLGHGDRASYRQPK 400

Query: 261 SIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ--HDELQPRAIQTF 318
            +  L+   SV +++ G  + + +T  G +YSFGS    CLG  +    + L+P  +  F
Sbjct: 401 HVEKLQG-KSVQKVSCGSDFTVCITDEGQLYSFGSDYYGCLGVNQSAGSEVLEPLLVDFF 459

Query: 319 RRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAV 378
             + +   +VS GD H++AL  S  VY+WG G  G LG   E D   P+ +   +    V
Sbjct: 460 LNEPVD--QVSCGDSHIMALTRSKSVYSWGCGEYGRLGLDSEDDVYSPQKVEVQRGLCIV 517

Query: 379 QVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRG---VSDKVLRP-------RILDSLR 428
            VC     +F+L  TG V   G      LG        ++ +  +         +   L 
Sbjct: 518 NVCCGSDGSFLLTLTGKVLACGLNEHNKLGLNQYTAGIINHEAFQEVPYTTSLTLAKQLS 577

Query: 429 AHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 463
            + +  IS G  HT  + +RGRL  FG N+  QLG
Sbjct: 578 FYKIRSISPGRTHTAAIDERGRLLTFGSNKCGQLG 612



 Score = 70.1 bits (170), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 47/173 (27%), Positives = 76/173 (43%), Gaps = 7/173 (4%)

Query: 312 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW-----GKGYCGALGHGDEIDKTLP 366
           P+ +  F+  G    +V AGD H   +     +YTW     G    G LGHGD      P
Sbjct: 341 PQKLDVFK-GGWRARQVCAGDAHFAVVTVEKELYTWVNMQGGSKLHGQLGHGDRASYRQP 399

Query: 367 EPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDS 426
           + +  L+     +V      T  + D G +Y FG   +G LG  ++    +VL P ++D 
Sbjct: 400 KHVEKLQGKSVQKVSCGSDFTVCITDEGQLYSFGSDYYGCLGV-NQSAGSEVLEPLLVDF 458

Query: 427 LRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQ 479
                V Q+S G  H + +T    ++ +G  E  +LG D+      P ++ +Q
Sbjct: 459 FLNEPVDQVSCGDSHIMALTRSKSVYSWGCGEYGRLGLDSEDDVYSPQKVEVQ 511



 Score = 68.9 bits (167), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 74/304 (24%), Positives = 130/304 (42%), Gaps = 34/304 (11%)

Query: 115 QITTGRYHTLLISNS-SVFSCGSSLCGVLG-HGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +++ G   T+ I++   ++S GS   G LG +    ++ +    ++F     V QVS  +
Sbjct: 412 KVSCGSDFTVCITDEGQLYSFGSDYYGCLGVNQSAGSEVLEPLLVDFFLNEPVDQVSCGD 471

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHR-----DTNRPIFRPRLVEALKGVPCKQVTAGLNF 227
           +H   + +S  V++ G      CG       D+   ++ P+ VE  +G+    V  G + 
Sbjct: 472 SHIMALTRSKSVYSWG------CGEYGRLGLDSEDDVYSPQKVEVQRGLCIVNVCCGSDG 525

Query: 228 TGFLTIRGHVHTCGSNTHGQLG----------HGDTLDRPTPKSIAPLEEVG--SVVQIA 275
           +  LT+ G V  CG N H +LG          H    + P   S+   +++    +  I+
Sbjct: 526 SFLLTLTGKVLACGLNEHNKLGLNQYTAGIINHEAFQEVPYTTSLTLAKQLSFYKIRSIS 585

Query: 276 AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHV 335
            G ++  A+   G + +FGS     LG G+    L    +      G  V+RVS GDE  
Sbjct: 586 PGRTHTAAIDERGRLLTFGSNKCGQLGVGDYRKHLGINLLGG-PLGGKQVIRVSCGDEFT 644

Query: 336 VALDSSGYVYTWGKGYCGALG-------HGDEIDKTLPEPLSSLKSHLAVQVCARKRKTF 388
            A  +  +++ WG G  G L         G +I  + P P+     H+    C R   T 
Sbjct: 645 TAATADNHIFAWGNGGNGRLAMTPNERPQGSDICTSWPRPIFGSLHHVTDLSC-RGWHTI 703

Query: 389 VLVD 392
           ++V+
Sbjct: 704 LIVE 707


>gi|328873771|gb|EGG22137.1| regulator of chromosome condensation domain-containing protein
           [Dictyostelium fasciculatum]
          Length = 1859

 Score =  110 bits (275), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 78/237 (32%), Positives = 122/237 (51%), Gaps = 17/237 (7%)

Query: 228 TGFLTIRGHVHTCGSNTHGQLG---HGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 284
           T   T RG + T GS+++ +LG    G    + TP+ + P   +  +  I+ G  Y  A+
Sbjct: 582 TQLDTQRG-IMTWGSSSNCKLGFKTEGREQSQATPERL-PNFNIPEICSISCGSYYSAAL 639

Query: 285 TGNGVVYSFGSGSN-----FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 339
           T NG VY +G GS        LG+G   D+L P  +++       VV VS G  H  AL 
Sbjct: 640 TENGDVYMWGRGSVKNPPLSTLGNGSLEDQLLPTKVESLS----EVVLVSIGYYHSAALK 695

Query: 340 SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGF 399
           S+G + TWG G  G LGHGD +++T+P+ + ++ SH   QV   ++ T  L   G V+ +
Sbjct: 696 SNGELLTWGCGEDGQLGHGDVLNQTIPKVVQTMTSHWVTQVQCGEKHTICLTKNGKVFTW 755

Query: 400 GWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGD 456
           G   +G LG    G + K   P ++ SL  +++ QI+ G  H  V+T+   +  FG+
Sbjct: 756 GTSEYGQLGL---GDTQKNCTPMLVTSLEKYNIIQIACGSTHCAVLTNAREVLVFGN 809



 Score = 98.2 bits (243), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 93/355 (26%), Positives = 158/355 (44%), Gaps = 24/355 (6%)

Query: 118 TGRYHTLLISNSSVFSCGSSLCGVLG---HGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           + R  T L +   + + GSS    LG    G E +Q       NF +   +  +S    +
Sbjct: 577 SSRSATQLDTQRGIMTWGSSSNCKLGFKTEGREQSQATPERLPNF-NIPEICSISCGSYY 635

Query: 175 AAFVLQSGQVFTCG----DNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
           +A + ++G V+  G     N         +      P  VE+L  V    V+ G   +  
Sbjct: 636 SAALTENGDVYMWGRGSVKNPPLSTLGNGSLEDQLLPTKVESLSEVVL--VSIGYYHSAA 693

Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 290
           L   G + T G    GQLGHGD L++  PK +  +     V Q+  G  + + +T NG V
Sbjct: 694 LKSNGELLTWGCGEDGQLGHGDVLNQTIPKVVQTMTS-HWVTQVQCGEKHTICLTKNGKV 752

Query: 291 YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKG 350
           +++G+     LG G+      P  + +  +   ++++++ G  H   L ++  V  +G G
Sbjct: 753 FTWGTSEYGQLGLGDTQKNCTPMLVTSLEK--YNIIQIACGSTHCAVLTNAREVLVFGNG 810

Query: 351 YCGALGHGDEIDKTLPEPLSSLKSHLAVQ-VCARKRKTFVLVDTGSVYGFGWMGFGSLGF 409
              A+G  + I  ++P  + +LK HL ++ +      T  L + G VY   W     LG 
Sbjct: 811 --AAMGSANII--SVPMMVPALK-HLNIERLSCGHYSTAALTECGDVYT--WGSGQELG- 862

Query: 410 PDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 464
              G +   L P+++D LR+  + QIS G  H   +TD G+++  G +   QLGH
Sbjct: 863 --HGTNQSELHPKLVDGLRSQSIRQISCGGRHMAFLTDSGKIYTCGKDPFGQLGH 915



 Score = 69.3 bits (168), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 63/225 (28%), Positives = 104/225 (46%), Gaps = 13/225 (5%)

Query: 115 QITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
           Q+  G  HT+ L  N  VF+ G+S  G LG G     C      +     +++Q++    
Sbjct: 735 QVQCGEKHTICLTKNGKVFTWGTSEYGQLGLGDTQKNCTPMLVTSL-EKYNIIQIACGST 793

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
           H A +  + +V   G+ ++    +      I  P +V ALK +  ++++ G   T  LT 
Sbjct: 794 HCAVLTNAREVLVFGNGAAMGSANI-----ISVPMMVPALKHLNIERLSCGHYSTAALTE 848

Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
            G V+T GS    +LGHG       PK +  L    S+ QI+ G  +M  +T +G +Y+ 
Sbjct: 849 CGDVYTWGSGQ--ELGHGTNQSELHPKLVDGLRS-QSIRQISCGGRHMAFLTDSGKIYTC 905

Query: 294 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
           G      LGH  Q D+ +P+ I +  +     + VS G+ H  +L
Sbjct: 906 GKDPFGQLGHA-QGDQNKPKKIDSLLKTTF--ISVSCGENHNASL 947


>gi|255551398|ref|XP_002516745.1| Ran GTPase binding protein, putative [Ricinus communis]
 gi|223544118|gb|EEF45643.1| Ran GTPase binding protein, putative [Ricinus communis]
          Length = 393

 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 101/368 (27%), Positives = 160/368 (43%), Gaps = 35/368 (9%)

Query: 125 LISNSSVFSCGSSLCGVLGHG-PETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQ 183
           + +++S+ + G+   G LG G  E  + V    +N      V  V A   ++  +   G+
Sbjct: 1   MATHTSLIAWGAGEDGQLGIGINEEKEWVCV--VNALEPYKVRSVVAGSRNSLAICDDGK 58

Query: 184 VFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 243
           +FT G N     GH    +    P  V+AL  V   Q   G      +  +G  +  G N
Sbjct: 59  LFTWGWNQRGTLGHPAETKTENIPSQVKALNNVNIVQAAIGGWHCLAVDDQGRAYAWGGN 118

Query: 244 THGQLGH--------GDTLDRPT--PKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
            +GQ G         G TL R    P+  AP      V Q+AAG ++ + +T  G V+++
Sbjct: 119 EYGQCGEEPERKDDTGKTLRRDIVIPQRCAPKL---VVRQVAAGGTHSVVLTREGHVWTW 175

Query: 294 GSGSNFCLGHGEQHDELQPRAIQTF----RRKGIHVVR-VSAGDEHVVALDSSGYVYTWG 348
           G                 P  I+      R +G+  V+ ++ G  H +AL   G ++ WG
Sbjct: 176 GQ-------------PWPPGDIKQISVPVRVQGLEKVKLIAVGAFHNLALQEDGTLWAWG 222

Query: 349 KGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLG 408
               G LG GD   ++ P P+  L     V + A    +  L D G VYG+G    G LG
Sbjct: 223 NNEYGQLGTGDTQPRSQPIPVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLG 282

Query: 409 FPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLR 468
           F D   S K++ P+ ++ L    + Q+S G  H+V +T  GR+F FG  +  +LG+    
Sbjct: 283 FGDNDKSSKMV-PQKVNLLAGEDIVQLSCGGTHSVALTQDGRMFSFGRGDHGRLGYGKKV 341

Query: 469 GCLEPTEI 476
              +P E+
Sbjct: 342 TTGQPVEV 349



 Score = 58.5 bits (140), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 54/207 (26%), Positives = 98/207 (47%), Gaps = 14/207 (6%)

Query: 115 QITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSF-TRINFPSAAHVVQVSASE 172
           Q+  G  H+++++    V++ G          P   + +S   R+       ++ V A  
Sbjct: 155 QVAAGGTHSVVLTREGHVWTWGQPWP------PGDIKQISVPVRVQGLEKVKLIAVGAFH 208

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
           N A  + + G ++  G+N     G  DT +P  +P  V+ L G+    + AG   +  LT
Sbjct: 209 NLA--LQEDGTLWAWGNNEYGQLGTGDT-QPRSQPIPVQGLSGLTLVDIAAGGWHSTALT 265

Query: 233 IRGHVHTCGSNTHGQLGHGDT--LDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 290
             G V+  G   HG+LG GD     +  P+ +  L     +VQ++ G ++ +A+T +G +
Sbjct: 266 DDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGE-DIVQLSCGGTHSVALTQDGRM 324

Query: 291 YSFGSGSNFCLGHGEQHDELQPRAIQT 317
           +SFG G +  LG+G++    QP  + T
Sbjct: 325 FSFGRGDHGRLGYGKKVTTGQPVEVPT 351


>gi|281209109|gb|EFA83284.1| regulator of chromosome condensation domain-containing protein
           [Polysphondylium pallidum PN500]
          Length = 853

 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 76/255 (29%), Positives = 124/255 (48%), Gaps = 20/255 (7%)

Query: 207 PRLVE-ALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL 265
           P LV+   K +    ++AG  ++  +T  G+V+T G N  GQLG GD      P+ I  L
Sbjct: 220 PVLVDFGSKSIKIVDISAGWAYSAAVTSTGNVYTWGFNEKGQLGLGDRWYHGNPRVIRSL 279

Query: 266 EEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHV 325
               S+V IA G  +M A++ +G +Y++G G    LGHG+    L P+ +  F ++   +
Sbjct: 280 SN-KSIVNIACGRQHMAAISKSGDLYTWGLGVFGQLGHGKLKSLLHPKKVLYFEQQQKKI 338

Query: 326 VRVSAGDEHVVALDSSGYVYTWGKGYCGALG---------------HGDEIDKTLPEPLS 370
           V+V+ G    +A+  +G ++++G G  G LG                 D +  +LP+ + 
Sbjct: 339 VQVATGANFTMAVSENGELFSFGHGEYGQLGATEDTQYMDWNNNGDRDDHLKYSLPKQVK 398

Query: 371 SLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAH 430
           +L+S    +V      T  +     VY +GW   G LGF DR      L P+ + SL   
Sbjct: 399 ALESVKVRKVACGHLHTIAVTTDNDVYTWGWGSSGCLGFGDRKFQ---LVPQRVPSLSGE 455

Query: 431 HVSQISTGLYHTVVV 445
            +S +S G  HT++V
Sbjct: 456 EISSVSGGEKHTLIV 470



 Score = 92.4 bits (228), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 69/251 (27%), Positives = 118/251 (47%), Gaps = 20/251 (7%)

Query: 157 INFPSAA-HVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 215
           ++F S +  +V +SA   ++A V  +G V+T G N     G  D       PR++ +L  
Sbjct: 223 VDFGSKSIKIVDISAGWAYSAAVTSTGNVYTWGFNEKGQLGLGDRWYH-GNPRVIRSLSN 281

Query: 216 VPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE-EVGSVVQI 274
                +  G      ++  G ++T G    GQLGHG       PK +   E +   +VQ+
Sbjct: 282 KSIVNIACGRQHMAAISKSGDLYTWGLGVFGQLGHGKLKSLLHPKKVLYFEQQQKKIVQV 341

Query: 275 AAGPSYMLAVTGNGVVYSFGSGSNFCLG------------HGEQHDELQ---PRAIQTFR 319
           A G ++ +AV+ NG ++SFG G    LG            +G++ D L+   P+ ++   
Sbjct: 342 ATGANFTMAVSENGELFSFGHGEYGQLGATEDTQYMDWNNNGDRDDHLKYSLPKQVKAL- 400

Query: 320 RKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQ 379
            + + V +V+ G  H +A+ +   VYTWG G  G LG GD   + +P+ + SL       
Sbjct: 401 -ESVKVRKVACGHLHTIAVTTDNDVYTWGWGSSGCLGFGDRKFQLVPQRVPSLSGEEISS 459

Query: 380 VCARKRKTFVL 390
           V   ++ T ++
Sbjct: 460 VSGGEKHTLIV 470



 Score = 75.9 bits (185), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 93/375 (24%), Positives = 141/375 (37%), Gaps = 48/375 (12%)

Query: 130 SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGD 189
           SV S G    G LG      Q +    I       + Q++  E H+  V + G V++ G 
Sbjct: 2   SVISFGVGKQGQLGLDVNKDQ-LDPAVIQLLKGKRIKQIACGEAHSLAVTEFGDVYSWGR 60

Query: 190 NSSFCCGH--RDTNRPIFRPRLVEALKGVPCKQVTAG------LNFTGFLTIRGHVHTCG 241
                 GH  +    P   P L++AL+     +V  G      L  TG +   G +H   
Sbjct: 61  GKEGELGHPQKAMTAP---PALIKALEHERIVKVACGNYHSLALTDTGKVYQWGQLHEID 117

Query: 242 SNTHGQLGHGDTLDRPTPKSIAPL------------EEVGSVVQIAAGPSYMLAVTGNGV 289
           +   G    G  ++    KS A              E+     + A+        T NG+
Sbjct: 118 ATKSGVKSQGGLVEMTGIKSFASKVADHSLSMYLNGEKAAYDEESASSSVLQDNPTANGL 177

Query: 290 VYSFGSGSNFCLGHG--EQHDELQPR-----------------AIQTFRRKGIHVVRVSA 330
           V          L     +   E QP                   +  F  K I +V +SA
Sbjct: 178 VTDDQEEEEEFLPEAIVDTQQEQQPEKSGSKVGEIVDKNQMTPVLVDFGSKSIKIVDISA 237

Query: 331 GDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVL 390
           G  +  A+ S+G VYTWG    G LG GD      P  + SL +   V +   ++    +
Sbjct: 238 GWAYSAAVTSTGNVYTWGFNEKGQLGLGDRWYHGNPRVIRSLSNKSIVNIACGRQHMAAI 297

Query: 391 VDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPR--ILDSLRAHHVSQISTGLYHTVVVTDR 448
             +G +Y +G   FG LG    G    +L P+  +    +   + Q++TG   T+ V++ 
Sbjct: 298 SKSGDLYTWGLGVFGQLG---HGKLKSLLHPKKVLYFEQQQKKIVQVATGANFTMAVSEN 354

Query: 449 GRLFGFGDNERAQLG 463
           G LF FG  E  QLG
Sbjct: 355 GELFSFGHGEYGQLG 369



 Score = 51.6 bits (122), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 48/176 (27%), Positives = 79/176 (44%), Gaps = 18/176 (10%)

Query: 114 MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSA-AHVVQVSAS 171
           + I  GR H   IS S  +++ G  + G LGHG   +       + F      +VQV+  
Sbjct: 285 VNIACGRQHMAAISKSGDLYTWGLGVFGQLGHGKLKSLLHPKKVLYFEQQQKKIVQVATG 344

Query: 172 ENHAAFVLQSGQVFTCG----------DNSSFC----CGHRDTNRPIFRPRLVEALKGVP 217
            N    V ++G++F+ G          +++ +      G RD +     P+ V+AL+ V 
Sbjct: 345 ANFTMAVSENGELFSFGHGEYGQLGATEDTQYMDWNNNGDRDDHLKYSLPKQVKALESVK 404

Query: 218 CKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGSV 271
            ++V  G   T  +T    V+T G  + G LG GD   +  P+ +  L  EE+ SV
Sbjct: 405 VRKVACGHLHTIAVTTDNDVYTWGWGSSGCLGFGDRKFQLVPQRVPSLSGEEISSV 460



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 36/129 (27%), Positives = 58/129 (44%), Gaps = 6/129 (4%)

Query: 358 GDEIDKTLPEPL---SSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGV 414
           G+ +DK    P+      KS   V + A    +  +  TG+VY +G+   G LG  DR  
Sbjct: 210 GEIVDKNQMTPVLVDFGSKSIKIVDISAGWAYSAAVTSTGNVYTWGFNEKGQLGLGDRWY 269

Query: 415 SDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPT 474
                 PR++ SL    +  I+ G  H   ++  G L+ +G     QLGH  L+  L P 
Sbjct: 270 HG---NPRVIRSLSNKSIVNIACGRQHMAAISKSGDLYTWGLGVFGQLGHGKLKSLLHPK 326

Query: 475 EIFIQEMEE 483
           ++   E ++
Sbjct: 327 KVLYFEQQQ 335



 Score = 38.9 bits (89), Expect = 5.3,   Method: Compositional matrix adjust.
 Identities = 22/70 (31%), Positives = 36/70 (51%), Gaps = 3/70 (4%)

Query: 395 SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 454
           SV  FG    G LG     V+   L P ++  L+   + QI+ G  H++ VT+ G ++ +
Sbjct: 2   SVISFGVGKQGQLGL---DVNKDQLDPAVIQLLKGKRIKQIACGEAHSLAVTEFGDVYSW 58

Query: 455 GDNERAQLGH 464
           G  +  +LGH
Sbjct: 59  GRGKEGELGH 68


>gi|299469793|emb|CBN76647.1| conserved unknown protein [Ectocarpus siliculosus]
          Length = 2478

 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 103/336 (30%), Positives = 139/336 (41%), Gaps = 61/336 (18%)

Query: 183 QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 242
           +V+TCG NS    GH DT        LV+  +G     V AG   T  L   G V+T G 
Sbjct: 232 EVWTCGQNSYGELGHSDTGTRKTHC-LVKPFEGREVVDVAAGNEHTVLLCSTGEVYTAGY 290

Query: 243 NTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA--GPSYMLAVTGNGVVYSFGSGSNFC 300
           N +GQ G G T  R    +  P++     VQ+ A  G  + L V  +G + SFG      
Sbjct: 291 NDNGQCGQG-TTQRVGVLTRVPIDGGRKAVQVHAYNGCEHTLVVLDDGQMMSFGYNYRGQ 349

Query: 301 LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 360
           LG G    E  P+ ++     GI V + S    H V    +G VYT+G+   G LG GD 
Sbjct: 350 LGQGNTSSEPVPKPVRGL--NGIRVTQASCSYYHSVIACDNGEVYTFGRNDFGQLGSGDV 407

Query: 361 IDKTLPEPLSSLKSH------------------LAVQVCAR-------------KRK--- 386
           ID+ LP  + SL+                    + VQ C +             +RK   
Sbjct: 408 IDRKLPCLVESLRGQRITTLACGQYHTVVSTLEIGVQSCGKNDYGQLGLESTESQRKFVA 467

Query: 387 -------------------TFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSL 427
                              T VL     V+GFG   +G LG      + +V  P I++  
Sbjct: 468 VKGKLDGAQVRHVRCGYYHTIVLTAEEHVFGFGRNDYGQLGLGH--TTQRVFGPTIIEGA 525

Query: 428 RAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 463
           +  HV +IS G YHTV++   G LF FG N   QLG
Sbjct: 526 QEKHVYRISAGCYHTVLIDADGMLFVFGRNHHGQLG 561



 Score = 85.5 bits (210), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 106/383 (27%), Positives = 170/383 (44%), Gaps = 31/383 (8%)

Query: 20  EILTSGRLSAVDLAHLELTSKTFGGSHGLY-PQKFRSLVDLAASQ-----LCALHSIY-A 72
           E+ T G+ S  +L H +  ++    +H L  P + R +VD+AA       LC+   +Y A
Sbjct: 232 EVWTCGQNSYGELGHSDTGTRK---THCLVKPFEGREVVDVAAGNEHTVLLCSTGEVYTA 288

Query: 73  GMSRNVQIELLNRCNGNWKRVLRFLQ-SVEHSSDIVETSAGNMQITTGRYHTLLI-SNSS 130
           G + N Q        G  +RV    +  ++     V+  A N     G  HTL++  +  
Sbjct: 289 GYNDNGQC-----GQGTTQRVGVLTRVPIDGGRKAVQVHAYN-----GCEHTLVVLDDGQ 338

Query: 131 VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDN 190
           + S G +  G LG G  +++ V    +   +   V Q S S  H+     +G+V+T G N
Sbjct: 339 MMSFGYNYRGQLGQGNTSSEPVP-KPVRGLNGIRVTQASCSYYHSVIACDNGEVYTFGRN 397

Query: 191 SSFCCGHRDT-NRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLG 249
                G  D  +R +  P LVE+L+G     +  G   T   T+   V +CG N +GQLG
Sbjct: 398 DFGQLGSGDVIDRKL--PCLVESLRGQRITTLACGQYHTVVSTLEIGVQSCGKNDYGQLG 455

Query: 250 HGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS--NFCLGHGEQH 307
              T  +    ++    +   V  +  G  + + +T    V+ FG        LGH  Q 
Sbjct: 456 LESTESQRKFVAVKGKLDGAQVRHVRCGYYHTIVLTAEEHVFGFGRNDYGQLGLGHTTQR 515

Query: 308 DELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPE 367
               P  I+  + K  HV R+SAG  H V +D+ G ++ +G+ + G LG GD  ++  P 
Sbjct: 516 -VFGPTIIEGAQEK--HVYRISAGCYHTVLIDADGMLFVFGRNHHGQLGTGDTNERHSPF 572

Query: 368 PLSSLKSHLAVQVCARKRKTFVL 390
           P+S+       +V A    T VL
Sbjct: 573 PVSTFLGKRIAKVAAGFYHTIVL 595



 Score = 81.6 bits (200), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 90/347 (25%), Positives = 147/347 (42%), Gaps = 20/347 (5%)

Query: 105 DIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVS-FTRINFPSAA 163
           ++V+ +AGN       +  LL S   V++ G +  G  G G  TTQ V   TR+      
Sbjct: 265 EVVDVAAGN------EHTVLLCSTGEVYTAGYNDNGQCGQG--TTQRVGVLTRVPIDGGR 316

Query: 164 HVVQVSASE--NHAAFVLQSGQVFTCGDNSSFCCGHRDTN-RPIFRPRLVEALKGVPCKQ 220
             VQV A     H   VL  GQ+ + G N     G  +T+  P+  P+ V  L G+   Q
Sbjct: 317 KAVQVHAYNGCEHTLVVLDDGQMMSFGYNYRGQLGQGNTSSEPV--PKPVRGLNGIRVTQ 374

Query: 221 VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 280
            +     +      G V+T G N  GQLG GD +DR  P  +  L     +  +A G  +
Sbjct: 375 ASCSYYHSVIACDNGEVYTFGRNDFGQLGSGDVIDRKLPCLVESLRG-QRITTLACGQYH 433

Query: 281 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 340
            +  T    V S G      LG      + +  A++  +  G  V  V  G  H + L +
Sbjct: 434 TVVSTLEIGVQSCGKNDYGQLGLESTESQRKFVAVKG-KLDGAQVRHVRCGYYHTIVLTA 492

Query: 341 SGYVYTWGKGYCGALGHGDEIDKTL-PEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGF 399
             +V+ +G+   G LG G    +   P  +   +     ++ A    T ++   G ++ F
Sbjct: 493 EEHVFGFGRNDYGQLGLGHTTQRVFGPTIIEGAQEKHVYRISAGCYHTVLIDADGMLFVF 552

Query: 400 GWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT 446
           G    G LG  D   +++   P  + +     +++++ G YHT+V+T
Sbjct: 553 GRNHHGQLGTGD---TNERHSPFPVSTFLGKRIAKVAAGFYHTIVLT 596


>gi|74213730|dbj|BAC39029.2| unnamed protein product [Mus musculus]
          Length = 1203

 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 91/315 (28%), Positives = 144/315 (45%), Gaps = 25/315 (7%)

Query: 160 PSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTN------RPIFRPRLVEAL 213
           PS +    + A +     +   G V  CG  S    G  D+N      +  F P    ++
Sbjct: 400 PSFSDAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPH--RSI 457

Query: 214 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
           K V   + + G   T   T  G V + G   +G+LGHG++  +  PK I    +   VV 
Sbjct: 458 KKVSSSKGSDG--HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVC 515

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           ++AG  +  AVT +G +Y++G G    LGHG+ +     R I T  +   +V  VS G  
Sbjct: 516 VSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNS----RNIPTLVKDISNVGEVSCGSS 571

Query: 334 HVVALDSSG-YVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVD 392
           H +AL   G  V+++G G  G LGHGD      P+ + +L+     +VCA  + +  L  
Sbjct: 572 HTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTS 631

Query: 393 TGSVYGFG---WMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRG 449
           TG VY +G    +G GS            LRP++++ L A  +  IS G  H + ++   
Sbjct: 632 TGQVYAWGCGACLGCGS-------SEATALRPKLIEELAATRIVDISIGDSHCLSLSHDN 684

Query: 450 RLFGFGDNERAQLGH 464
            ++ +G+N   Q G 
Sbjct: 685 EVYAWGNNSMGQCGQ 699



 Score = 96.7 bits (239), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 89/266 (33%), Positives = 128/266 (48%), Gaps = 14/266 (5%)

Query: 122 HTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
           HTL   +   VFS G    G LGHG  +TQ              VV VSA   H+A V +
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528

Query: 181 SGQVFTCGDNSSFCCGHRDTN-RPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH-VH 238
            G+++T G+      GH D+N R I  P LV+ +  V   +V+ G + T  L+  G  V 
Sbjct: 529 DGELYTWGEGDFGRLGHGDSNSRNI--PTLVKDISNV--GEVSCGSSHTIALSKDGRTVW 584

Query: 239 TCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
           + G   +G+LGHGDT     PK I  L+ +  + ++ AG    LA+T  G VY++G G+ 
Sbjct: 585 SFGGGDNGKLGHGDTNRVYKPKVIEALQGM-FIRKVCAGSQSSLALTSTGQVYAWGCGA- 642

Query: 299 FCLGHG-EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 357
            CLG G  +   L+P+ I+        +V +S GD H ++L     VY WG    G  G 
Sbjct: 643 -CLGCGSSEATALRPKLIEEL--AATRIVDISIGDSHCLSLSHDNEVYAWGNNSMGQCGQ 699

Query: 358 GDEIDK-TLPEPLSSLKSHLAVQVCA 382
           G+     T P+ +S L      Q+ A
Sbjct: 700 GNSTGPITKPKKVSGLDGIAIQQISA 725



 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 49/180 (27%), Positives = 82/180 (45%), Gaps = 13/180 (7%)

Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 349
           VY +GS S+  L  G Q   LQP+   +F         + AG      + + G V   GK
Sbjct: 374 VYVWGSNSSHQLVEGTQEKILQPKLAPSFS----DAQTIEAGQYCTFVISTDGSVRACGK 429

Query: 350 GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKR----KTFVLVDTGSVYGFGWMGFG 405
           G  G LG GD  +++  + L + + H +++  +  +     T      G V+ +G   +G
Sbjct: 430 GSYGRLGLGDSNNQSTLKKL-TFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYG 488

Query: 406 SLGFPDRGVSDKVLRPRILD-SLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 464
            LG    G S     P+++   L+   V  +S G  H+  VT+ G L+ +G+ +  +LGH
Sbjct: 489 KLG---HGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGH 545



 Score = 48.5 bits (114), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 28/100 (28%), Positives = 48/100 (48%), Gaps = 2/100 (2%)

Query: 125 LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQV 184
           L S   V++ G   C  LG G      +    I   +A  +V +S  ++H   +    +V
Sbjct: 629 LTSTGQVYAWGCGAC--LGCGSSEATALRPKLIEELAATRIVDISIGDSHCLSLSHDNEV 686

Query: 185 FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           +  G+NS   CG  ++  PI +P+ V  L G+  +Q++AG
Sbjct: 687 YAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAG 726


>gi|348528302|ref|XP_003451657.1| PREDICTED: RCC1 and BTB domain-containing protein 1 [Oreochromis
           niloticus]
          Length = 531

 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 78/255 (30%), Positives = 123/255 (48%), Gaps = 11/255 (4%)

Query: 230 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSV-VQIAAGPSYMLAVTGNG 288
           ++T    V   G N    LG GD+L    PK +  L     V +   +GP  +LA T +G
Sbjct: 36  YITNDDEVFVFGLNCSNCLGTGDSLSTIVPKKLDFLSGRKVVSLSYGSGPHILLA-TEDG 94

Query: 289 VVYSFGSGSNFCLGHGEQHDELQPRAIQT--FRRKGIHVVRVSAGDEHVVALDSSGYVYT 346
            ++++G      LG+G  +  + P  +      +K   V  V+ G  H +AL  +G VY 
Sbjct: 95  ELFAWGHNGYSQLGNGTTNQGVAPVLVSANLLNKK---VTEVACGSHHSMALTDTGEVYA 151

Query: 347 WGKGYCGALGHGDEIDKTLPEPLSS-LKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFG 405
           WG   CG +G G   ++  P  +SS L++ +AV +   +  +  +VD G VYG+G+ G G
Sbjct: 152 WGYNNCGQVGSGSTANQPTPRRVSSCLQNKVAVSIVCGQTSSLAVVDNGEVYGWGYNGNG 211

Query: 406 SLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHD 465
            LG  + G     + P  L  L+   V QI +G  H++ +TD G L+ +G N   QLG  
Sbjct: 212 QLGLGNNG---NQVTPCRLVGLQGLCVQQIVSGYAHSMALTDEGLLYAWGANTYGQLGTG 268

Query: 466 TLRGCLEPTEIFIQE 480
                L P +I  ++
Sbjct: 269 NKSNQLSPVQILTEK 283



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 79/279 (28%), Positives = 129/279 (46%), Gaps = 7/279 (2%)

Query: 125 LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS-ASENHAAFVLQSGQ 183
           + ++  VF  G +    LG G   +  V   +++F S   VV +S  S  H     + G+
Sbjct: 37  ITNDDEVFVFGLNCSNCLGTGDSLSTIVP-KKLDFLSGRKVVSLSYGSGPHILLATEDGE 95

Query: 184 VFTCGDNSSFCCGHRDTNRPIFRPRLVEA-LKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 242
           +F  G N     G+  TN+ +  P LV A L      +V  G + +  LT  G V+  G 
Sbjct: 96  LFAWGHNGYSQLGNGTTNQGV-APVLVSANLLNKKVTEVACGSHHSMALTDTGEVYAWGY 154

Query: 243 NTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLG 302
           N  GQ+G G T ++PTP+ ++   +    V I  G +  LAV  NG VY +G   N  LG
Sbjct: 155 NNCGQVGSGSTANQPTPRRVSSCLQNKVAVSIVCGQTSSLAVVDNGEVYGWGYNGNGQLG 214

Query: 303 HGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEID 362
            G   +++ P   +    +G+ V ++ +G  H +AL   G +Y WG    G LG G++ +
Sbjct: 215 LGNNGNQVTP--CRLVGLQGLCVQQIVSGYAHSMALTDEGLLYAWGANTYGQLGTGNKSN 272

Query: 363 KTLPEPLSSLKSHLA-VQVCARKRKTFVLVDTGSVYGFG 400
           +  P  + + K  +  +  C     +     +G VY +G
Sbjct: 273 QLSPVQILTEKERIVEIAACHSTHTSAAKTQSGQVYMWG 311



 Score = 78.6 bits (192), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 64/240 (26%), Positives = 108/240 (45%), Gaps = 3/240 (1%)

Query: 170 ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
           +S N A ++    +VF  G N S C G  D+   I  P+ ++ L G     ++ G     
Sbjct: 29  SSANEAIYITNDDEVFVFGLNCSNCLGTGDSLSTIV-PKKLDFLSGRKVVSLSYGSGPHI 87

Query: 230 FL-TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG 288
            L T  G +   G N + QLG+G T     P  ++       V ++A G  + +A+T  G
Sbjct: 88  LLATEDGELFAWGHNGYSQLGNGTTNQGVAPVLVSANLLNKKVTEVACGSHHSMALTDTG 147

Query: 289 VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 348
            VY++G  +   +G G   ++  PR + +  +  +  V +  G    +A+  +G VY WG
Sbjct: 148 EVYAWGYNNCGQVGSGSTANQPTPRRVSSCLQNKV-AVSIVCGQTSSLAVVDNGEVYGWG 206

Query: 349 KGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLG 408
               G LG G+  ++  P  L  L+     Q+ +    +  L D G +Y +G   +G LG
Sbjct: 207 YNGNGQLGLGNNGNQVTPCRLVGLQGLCVQQIVSGYAHSMALTDEGLLYAWGANTYGQLG 266


>gi|428170458|gb|EKX39383.1| hypothetical protein GUITHDRAFT_89130 [Guillardia theta CCMP2712]
          Length = 396

 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 83/302 (27%), Positives = 147/302 (48%), Gaps = 25/302 (8%)

Query: 89  NWK-RVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLISN-SSVFSCGSSLCGVLGHGP 146
           +W+ R +R L++V+            +QI  G  H++ +++ S VF+ G  L G LGHG 
Sbjct: 79  DWEPRWIRALETVK-----------VVQIAAGEDHSVALTDRSEVFTWGRGLHGQLGHGD 127

Query: 147 ETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPI-- 204
            +     F  +       +  +     +   +  +G+V   G  +S   G+ D +  I  
Sbjct: 128 VSDVWFPFL-VKGLQGKGIKSIGCGYENTFAITGTGKVLGFGSAASGKLGNGDVDGGIGG 186

Query: 205 --FRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLG----HGDTLDRPT 258
             + P  +++L      Q T G NF+ FL+  G +++ G   +GQLG      ++L+ P 
Sbjct: 187 NVYLPVQLKSLAKFTIIQATGGKNFSMFLSHTGQLYSVGYAANGQLGIPFEEVESLNLPY 246

Query: 259 PKSIAPLEEVGSVVQ-IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQT 317
             ++  +   G  V+ ++ G S+ LA++ +G+VYS+GSG N+ LGHG   D   P+ +  
Sbjct: 247 TGTMQEVSHKGVFVKYVSCGDSHSLALSEDGIVYSWGSGINWALGHGGTEDTFTPKMVAM 306

Query: 318 FRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLA 377
                   V VSAG  H  A+ ++G +YTWG+ + G LG G  ID    + +  L + + 
Sbjct: 307 LEAD--PCVSVSAGGYHSAAVSATGRIYTWGRNFVGQLGTGQNIDDHSADHVQRLPTRVI 364

Query: 378 VQ 379
           ++
Sbjct: 365 LK 366



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 94/342 (27%), Positives = 149/342 (43%), Gaps = 13/342 (3%)

Query: 131 VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDN 190
           V+SCG    G LG   E  +      +       V  ++    H   + ++G+V++ G N
Sbjct: 6   VYSCGHGAGGRLGLNDERARTAFTGPLGTLQDVEVKSLACGGKHNLLLSRAGKVYSWGYN 65

Query: 191 SSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGH 250
            S   GH   +   + PR + AL+ V   Q+ AG + +  LT R  V T G   HGQLGH
Sbjct: 66  DSRQTGHGVEDLSDWEPRWIRALETVKVVQIAAGEDHSVALTDRSEVFTWGRGLHGQLGH 125

Query: 251 GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDEL 310
           GD  D   P  +  L+  G +  I  G     A+TG G V  FGS ++  LG+G+    +
Sbjct: 126 GDVSDVWFPFLVKGLQGKG-IKSIGCGYENTFAITGTGKVLGFGSAASGKLGNGDVDGGI 184

Query: 311 QPRAIQTFRRKGIH---VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPE 367
                   + K +    +++ + G    + L  +G +Y+ G    G LG   E  ++L  
Sbjct: 185 GGNVYLPVQLKSLAKFTIIQATGGKNFSMFLSHTGQLYSVGYAANGQLGIPFEEVESLNL 244

Query: 368 PLS------SLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRP 421
           P +      S K      V      +  L + G VY +G     +LG    G ++    P
Sbjct: 245 PYTGTMQEVSHKGVFVKYVSCGDSHSLALSEDGIVYSWGSGINWALG---HGGTEDTFTP 301

Query: 422 RILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 463
           +++  L A     +S G YH+  V+  GR++ +G N   QLG
Sbjct: 302 KMVAMLEADPCVSVSAGGYHSAAVSATGRIYTWGRNFVGQLG 343



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 52/186 (27%), Positives = 86/186 (46%), Gaps = 15/186 (8%)

Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAIQTFR-----RKGIHVVRVSAGDEHVVALDSSGYV 344
           VYS G G+   LG  ++      RA   F       + + V  ++ G +H + L  +G V
Sbjct: 6   VYSCGHGAGGRLGLNDE------RARTAFTGPLGTLQDVEVKSLACGGKHNLLLSRAGKV 59

Query: 345 YTWGKGYCGALGHG-DEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 403
           Y+WG       GHG +++    P  + +L++   VQ+ A +  +  L D   V+ +G   
Sbjct: 60  YSWGYNDSRQTGHGVEDLSDWEPRWIRALETVKVVQIAAGEDHSVALTDRSEVFTWGRGL 119

Query: 404 FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 463
            G LG  D  VSD V  P ++  L+   +  I  G  +T  +T  G++ GFG     +LG
Sbjct: 120 HGQLGHGD--VSD-VWFPFLVKGLQGKGIKSIGCGYENTFAITGTGKVLGFGSAASGKLG 176

Query: 464 HDTLRG 469
           +  + G
Sbjct: 177 NGDVDG 182


>gi|408500686|ref|YP_006864605.1| RCC1 repeat-containing protein [Bifidobacterium asteroides PRL2011]
 gi|408465510|gb|AFU71039.1| RCC1 repeat-containing protein [Bifidobacterium asteroides PRL2011]
          Length = 1073

 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 95/357 (26%), Positives = 167/357 (46%), Gaps = 21/357 (5%)

Query: 115 QITTGRYHTLLISNSSV-FSCGSSLCGVLGHGPETTQCVSFT-RINFPSAAHVVQVSASE 172
           Q + G+  +L + +  V +S G++  G LG  P  +       R++ P+  H +Q+SA +
Sbjct: 76  QFSAGKDFSLALDSLGVLYSWGNNSQGQLGRTPTDSDPADRPGRVDVPNGTHFLQISAGD 135

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRP-RLVEALKGVPC-KQVTAGLNFTGF 230
           ++A  +  +  +++ G+N     G   ++ P   P +++ ++       QV+ G N+   
Sbjct: 136 DYAVAIDINHHLYSWGNNEKGQAGQGISSSPSLPPNQVIPSVNATQSFVQVSTGPNYVLA 195

Query: 231 LTIRGHVHTCGSNTHGQLGH--GDTLDRPTPKSIAP--LEEVGSVVQIAAGPSYMLAVTG 286
           +   G V++ G N+ GQLG   G T+    P +  P  L +   + Q+ AG    LA+  
Sbjct: 196 VCSDGTVYSWGDNSSGQLGREVGGTMTHYGPGNPNPVSLPKGVKITQVTAGGKASLALAS 255

Query: 287 NGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYT 346
           +G VYS+G  S+  LG      E   RA +     G++  ++SAG  H++A+DS G  Y+
Sbjct: 256 DGSVYSWGDNSSGQLGRTPSASEPANRAYKMTTADGMNFSQISAGYRHILAVDSDGNTYS 315

Query: 347 WGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGS 406
           WG G     G        LP+    +++ L   + A    + V    G++Y +G    G 
Sbjct: 316 WGYG-----GTSQPSKVALPD---GIRTRL---ISAGHDYSLVTASDGNIYSWGDNSSGQ 364

Query: 407 LGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 463
           LG  D G  +   +P    +      +Q   G  H + +   G L+G+GDN  +QLG
Sbjct: 365 LG-QDTG-GETTNQPGKAVTPDGVTYTQAIAGYRHILAMGSDGYLYGWGDNSSSQLG 419



 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 86/314 (27%), Positives = 142/314 (45%), Gaps = 34/314 (10%)

Query: 167 QVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNR-PIFRPRLVEALKGVPCKQVTAGL 225
           Q SA ++ +  +   G +++ G+NS    G   T+  P  RP  V+   G    Q++AG 
Sbjct: 76  QFSAGKDFSLALDSLGVLYSWGNNSQGQLGRTPTDSDPADRPGRVDVPNGTHFLQISAGD 135

Query: 226 NFTGFLTIRGHVHTCGSNTHGQLGHG--DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
           ++   + I  H+++ G+N  GQ G G   +   P  + I  +    S VQ++ GP+Y+LA
Sbjct: 136 DYAVAIDINHHLYSWGNNEKGQAGQGISSSPSLPPNQVIPSVNATQSFVQVSTGPNYVLA 195

Query: 284 VTGNGVVYSFGSGSNFCLGHG-----EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
           V  +G VYS+G  S+  LG         +    P  +     KG+ + +V+AG +  +AL
Sbjct: 196 VCSDGTVYSWGDNSSGQLGREVGGTMTHYGPGNPNPVSL--PKGVKITQVTAGGKASLAL 253

Query: 339 DSSGYVYTWGKGYCGALGHGDEIDKTLPEP------LSSLKSHLAVQVCARKRKTFVLVD 392
            S G VY+WG    G LG       +  EP      +++       Q+ A  R    +  
Sbjct: 254 ASDGSVYSWGDNSSGQLGR----TPSASEPANRAYKMTTADGMNFSQISAGYRHILAVDS 309

Query: 393 TGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLF 452
            G+ Y +G   +G    P +      +R R+           IS G  +++V    G ++
Sbjct: 310 DGNTYSWG---YGGTSQPSKVALPDGIRTRL-----------ISAGHDYSLVTASDGNIY 355

Query: 453 GFGDNERAQLGHDT 466
            +GDN   QLG DT
Sbjct: 356 SWGDNSSGQLGQDT 369



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 76/260 (29%), Positives = 113/260 (43%), Gaps = 26/260 (10%)

Query: 212 ALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSV 271
           A+  +   Q +AG +F+  L   G +++ G+N+ GQLG        TP    P +  G V
Sbjct: 68  AIGDIRFSQFSAGKDFSLALDSLGVLYSWGNNSQGQLGR-------TPTDSDPADRPGRV 120

Query: 272 --------VQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHG-EQHDELQPRAIQTFRRKG 322
                   +QI+AG  Y +A+  N  +YS+G+      G G      L P  +       
Sbjct: 121 DVPNGTHFLQISAGDDYAVAIDINHHLYSWGNNEKGQAGQGISSSPSLPPNQVIPSVNAT 180

Query: 323 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTL-------PEPLSSLKSH 375
              V+VS G  +V+A+ S G VY+WG    G LG   E+  T+       P P+S  K  
Sbjct: 181 QSFVQVSTGPNYVLAVCSDGTVYSWGDNSSGQLGR--EVGGTMTHYGPGNPNPVSLPKGV 238

Query: 376 LAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQI 435
              QV A  + +  L   GSVY +G    G LG      S+   R   + +    + SQI
Sbjct: 239 KITQVTAGGKASLALASDGSVYSWGDNSSGQLGR-TPSASEPANRAYKMTTADGMNFSQI 297

Query: 436 STGLYHTVVVTDRGRLFGFG 455
           S G  H + V   G  + +G
Sbjct: 298 SAGYRHILAVDSDGNTYSWG 317



 Score = 78.6 bits (192), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 84/336 (25%), Positives = 142/336 (42%), Gaps = 30/336 (8%)

Query: 144 HGPETT-QCVSFTRINFPSAAHVVQVSASENHAAFVL---QSGQVFTCGDNSSFCCGHRD 199
            GP+T  Q V  T    P     ++ S  ++ A F L     G +++ G N  +  GH  
Sbjct: 583 EGPQTGGQSVKLTP---PQGTRGIRFSWIQSGADFSLALGSDGNLYSWGINYDYQLGHTT 639

Query: 200 TNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGD-TLDRPT 258
           +++P+    +VE   GV   Q  AG  F   L   G+V+T G+NT+ QLG      +   
Sbjct: 640 SDKPV----VVETPAGVRYTQAAAGQKFALALGSDGYVYTWGNNTYDQLGRSTFGNNHNA 695

Query: 259 PKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTF 318
           P  + P   +    ++ AG  + LA+  +G +Y++G  S   LG G      +   ++  
Sbjct: 696 PDKVTPPAGI-HYTRVYAGDCFALALGSDGNLYAWGDNSAGALGQGRIGATSR-NPLRVV 753

Query: 319 RRKGIHVVRVSAG--DEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHL 376
             +GI   +V  G   +HV+AL S G +Y+WG      LG            L++L   L
Sbjct: 754 APEGITFTQVFTGPSSKHVLALGSDGNLYSWGYDDSFQLGRQRNA-------LTALGDPL 806

Query: 377 AVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAH------ 430
             +V A    TF    TG  +        +L     G+  ++   +++    ++      
Sbjct: 807 PGKVQAPAGITFTQASTGLNFSLALGSDNNLYSWGNGLKSQLGNAQMISMYPSNVIMPSG 866

Query: 431 -HVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHD 465
            + ++   G Y  +     G L+ +G N+  QLG D
Sbjct: 867 INFTRFVAGRYFAIAAGSDGNLYSWGYNDYGQLGRD 902



 Score = 76.6 bits (187), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 80/292 (27%), Positives = 128/292 (43%), Gaps = 50/292 (17%)

Query: 211 EALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRP----TPKSIAPLE 266
           +  +G+    + +G +F+  L   G++++ G N   QLGH  T D+P    TP  +    
Sbjct: 598 QGTRGIRFSWIQSGADFSLALGSDGNLYSWGINYDYQLGH-TTSDKPVVVETPAGV---- 652

Query: 267 EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH---GEQH---DELQPRAIQTFRR 320
                 Q AAG  + LA+  +G VY++G+ +   LG    G  H   D++ P A      
Sbjct: 653 ---RYTQAAAGQKFALALGSDGYVYTWGNNTYDQLGRSTFGNNHNAPDKVTPPA------ 703

Query: 321 KGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK----SHL 376
            GIH  RV AGD   +AL S G +Y WG    GALG G  I  T   PL  +     +  
Sbjct: 704 -GIHYTRVYAGDCFALALGSDGNLYAWGDNSAGALGQG-RIGATSRNPLRVVAPEGITFT 761

Query: 377 AVQVCARKRKTFVLVDTGSVYGFGW----------MGFGSLGFPDRGVSDKVLRPRILDS 426
            V      +    L   G++Y +G+              +LG P  G   KV  P  +  
Sbjct: 762 QVFTGPSSKHVLALGSDGNLYSWGYDDSFQLGRQRNALTALGDPLPG---KVQAPAGI-- 816

Query: 427 LRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFI 478
                 +Q STGL  ++ +     L+ +G+  ++QLG+  +   + P+ + +
Sbjct: 817 ----TFTQASTGLNFSLALGSDNNLYSWGNGLKSQLGNAQMI-SMYPSNVIM 863



 Score = 74.7 bits (182), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 80/294 (27%), Positives = 119/294 (40%), Gaps = 50/294 (17%)

Query: 114 MQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPS---AAHVVQVS 169
           +QI+ G  + + I  N  ++S G++  G  G G  ++  +   ++  PS       VQVS
Sbjct: 129 LQISAGDDYAVAIDINHHLYSWGNNEKGQAGQGISSSPSLPPNQV-IPSVNATQSFVQVS 187

Query: 170 ASENHAAFVLQSGQVFTCGDNSSFCCGHR----DTNRPIFRPRLVEALKGVPCKQVTAGL 225
              N+   V   G V++ GDNSS   G       T+     P  V   KGV   QVTAG 
Sbjct: 188 TGPNYVLAVCSDGTVYSWGDNSSGQLGREVGGTMTHYGPGNPNPVSLPKGVKITQVTAGG 247

Query: 226 NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG-SVVQIAAGPSYMLAV 284
             +  L   G V++ G N+ GQLG   +   P  ++       G +  QI+AG  ++LAV
Sbjct: 248 KASLALASDGSVYSWGDNSSGQLGRTPSASEPANRAYKMTTADGMNFSQISAGYRHILAV 307

Query: 285 TGNGVVYSFGSG-----SNFCLGHGEQ-------HD------------------------ 308
             +G  YS+G G     S   L  G +       HD                        
Sbjct: 308 DSDGNTYSWGYGGTSQPSKVALPDGIRTRLISAGHDYSLVTASDGNIYSWGDNSSGQLGQ 367

Query: 309 ----ELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 358
               E   +  +     G+   +  AG  H++A+ S GY+Y WG      LG G
Sbjct: 368 DTGGETTNQPGKAVTPDGVTYTQAIAGYRHILAMGSDGYLYGWGDNSSSQLGTG 421



 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 59/221 (26%), Positives = 102/221 (46%), Gaps = 15/221 (6%)

Query: 251 GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDEL 310
           G+T    TP +I  +       Q +AG  + LA+   GV+YS+G+ S   LG      + 
Sbjct: 58  GNTTATLTPPAIGDIR----FSQFSAGKDFSLALDSLGVLYSWGNNSQGQLGRTPTDSDP 113

Query: 311 QPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP--EP 368
             R  +     G H +++SAGD++ VA+D + ++Y+WG    G  G G     +LP  + 
Sbjct: 114 ADRPGRVDVPNGTHFLQISAGDDYAVAIDINHHLYSWGNNEKGQAGQGISSSPSLPPNQV 173

Query: 369 LSSLKSHLA-VQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVL-----RPR 422
           + S+ +  + VQV         +   G+VY +G    G LG   R V   +       P 
Sbjct: 174 IPSVNATQSFVQVSTGPNYVLAVCSDGTVYSWGDNSSGQLG---REVGGTMTHYGPGNPN 230

Query: 423 ILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 463
            +   +   ++Q++ G   ++ +   G ++ +GDN   QLG
Sbjct: 231 PVSLPKGVKITQVTAGGKASLALASDGSVYSWGDNSSGQLG 271



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 62/247 (25%), Positives = 104/247 (42%), Gaps = 14/247 (5%)

Query: 125 LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQV--SASENHAAFVLQSG 182
           L S+ ++++ G +  G LG G       +  R+  P      QV    S  H   +   G
Sbjct: 720 LGSDGNLYAWGDNSAGALGQGRIGATSRNPLRVVAPEGITFTQVFTGPSSKHVLALGSDG 779

Query: 183 QVFTCGDNSSFCCGHRDT-----NRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHV 237
            +++ G + SF  G +         P+  P  V+A  G+   Q + GLNF+  L    ++
Sbjct: 780 NLYSWGYDDSFQLGRQRNALTALGDPL--PGKVQAPAGITFTQASTGLNFSLALGSDNNL 837

Query: 238 HTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 297
           ++ G+    QLG+   +       I P     +  +  AG  + +A   +G +YS+G   
Sbjct: 838 YSWGNGLKSQLGNAQMISMYPSNVIMPSGI--NFTRFVAGRYFAIAAGSDGNLYSWGYND 895

Query: 298 NFCLGHG-EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 356
              LG       +  P  ++     GI +++  AGD H  A+ S G  Y+WGK   G LG
Sbjct: 896 YGQLGRDISDKSDYMPTKLEA--PAGITLIQPQAGDNHSSAIGSDGNTYSWGKSADGVLG 953

Query: 357 HGDEIDK 363
                D+
Sbjct: 954 RDTSGDQ 960


>gi|356501809|ref|XP_003519716.1| PREDICTED: uncharacterized protein LOC100778984 [Glycine max]
          Length = 1122

 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 94/325 (28%), Positives = 145/325 (44%), Gaps = 20/325 (6%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V Q+   + H A V + G+VFT G++S    GH    +   RP LVE+L       V  G
Sbjct: 305 VHQIGPGDRHIALVTRQGEVFTWGEDSGGRLGH-GFEKDFGRPHLVESLAITNVTFVACG 363

Query: 225 LNFTGFLTIRGHVHTCGSNTHGQ--LGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSYM 281
              +  ++  G + T G  THG   LGHG  +    PK ++ PLE +  VV +A G  + 
Sbjct: 364 EYHSCAVSSSGDLFTWGDGTHGAGLLGHGTDVSYWIPKRVSGPLEGL-QVVSVACGTWHS 422

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL--- 338
              T NG +++ G G    LGHG++     P+ +Q     G   ++V+ G  H  A+   
Sbjct: 423 ALATSNGKLFTIGDGRFGVLGHGDRDSVAYPKEVQLL--SGHKAIKVACGVWHSAAIIEV 480

Query: 339 -------DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 391
                   S+  ++TWG G    LGH ++     P  ++++  +   QV      T  L 
Sbjct: 481 MGPSGSNTSAKRLFTWGDGDQYRLGHVNKETYLEPTCVAAVAEYNFHQVACGYTMTVALT 540

Query: 392 DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRL 451
            +G V+  G   +G LG P+   SD  +   +   L    V +IS G  H  V+T R  L
Sbjct: 541 TSGHVFTMGGTAYGQLGNPN---SDGKVPILVRGKLVGEFVEEISCGANHVAVLTSRSEL 597

Query: 452 FGFGDNERAQLGHDTLRGCLEPTEI 476
           + +G     +LGH        PT +
Sbjct: 598 YTWGRGANGRLGHGDTDDQKSPTMV 622



 Score = 85.5 bits (210), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 78/272 (28%), Positives = 126/272 (46%), Gaps = 19/272 (6%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSL--CGVLGHGPETTQCVSFTRINFP-SAAHVVQVSAS 171
           +  G YH+  +S+S  +F+ G      G+LGHG + +  +   R++ P     VV V+  
Sbjct: 360 VACGEYHSCAVSSSGDLFTWGDGTHGAGLLGHGTDVSYWIP-KRVSGPLEGLQVVSVACG 418

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG------- 224
             H+A    +G++FT GD      GH D +   + P+ V+ L G    +V  G       
Sbjct: 419 TWHSALATSNGKLFTIGDGRFGVLGHGDRDSVAY-PKEVQLLSGHKAIKVACGVWHSAAI 477

Query: 225 ---LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 281
              +  +G  T    + T G     +LGH +      P  +A + E  +  Q+A G +  
Sbjct: 478 IEVMGPSGSNTSAKRLFTWGDGDQYRLGHVNKETYLEPTCVAAVAEY-NFHQVACGYTMT 536

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 341
           +A+T +G V++ G  +   LG+    D   P  ++  +  G  V  +S G  HV  L S 
Sbjct: 537 VALTTSGHVFTMGGTAYGQLGN-PNSDGKVPILVRG-KLVGEFVEEISCGANHVAVLTSR 594

Query: 342 GYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 373
             +YTWG+G  G LGHGD  D+  P  + +LK
Sbjct: 595 SELYTWGRGANGRLGHGDTDDQKSPTMVEALK 626



 Score = 85.5 bits (210), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 90/345 (26%), Positives = 141/345 (40%), Gaps = 36/345 (10%)

Query: 115 QITTGRYHTLLISNS-SVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHVV 166
           QI  G  H  L++    VF+ G    G LGHG       P   + ++ T + F       
Sbjct: 307 QIGPGDRHIALVTRQGEVFTWGEDSGGRLGHGFEKDFGRPHLVESLAITNVTF------- 359

Query: 167 QVSASENHAAFVLQSGQVFTCGDNS--SFCCGHRDTNRPIFRPRLVEA-LKGVPCKQVTA 223
            V+  E H+  V  SG +FT GD +  +   GH  T+   + P+ V   L+G+    V  
Sbjct: 360 -VACGEYHSCAVSSSGDLFTWGDGTHGAGLLGH-GTDVSYWIPKRVSGPLEGLQVVSVAC 417

Query: 224 GLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
           G   +   T  G + T G    G LGHGD      PK +  L      +++A G  +  A
Sbjct: 418 GTWHSALATSNGKLFTIGDGRFGVLGHGDRDSVAYPKEVQLLSG-HKAIKVACGVWHSAA 476

Query: 284 V----------TGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           +          T    ++++G G  + LGH  +   L+P  +        H  +V+ G  
Sbjct: 477 IIEVMGPSGSNTSAKRLFTWGDGDQYRLGHVNKETYLEPTCVAAVAEYNFH--QVACGYT 534

Query: 334 HVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDT 393
             VAL +SG+V+T G    G LG+ +   K        L      ++        VL   
Sbjct: 535 MTVALTTSGHVFTMGGTAYGQLGNPNSDGKVPILVRGKLVGEFVEEISCGANHVAVLTSR 594

Query: 394 GSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTG 438
             +Y +G    G LG    G +D    P ++++L+  H+  IS G
Sbjct: 595 SELYTWGRGANGRLG---HGDTDDQKSPTMVEALKDRHIKNISCG 636



 Score = 83.2 bits (204), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 77/301 (25%), Positives = 136/301 (45%), Gaps = 19/301 (6%)

Query: 182 GQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCG 241
           G+V+  G++S            +  P+ +E+   +   Q+  G      +T +G V T G
Sbjct: 269 GEVWVDGNSSDGLGSLASCKTDVLTPKPLESDVVLDVHQIGPGDRHIALVTRQGEVFTWG 328

Query: 242 SNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC- 300
            ++ G+LGHG   D   P  +  L  + +V  +A G  +  AV+ +G ++++G G++   
Sbjct: 329 EDSGGRLGHGFEKDFGRPHLVESLA-ITNVTFVACGEYHSCAVSSSGDLFTWGDGTHGAG 387

Query: 301 -LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGD 359
            LGHG       P+ + +   +G+ VV V+ G  H     S+G ++T G G  G LGHGD
Sbjct: 388 LLGHGTDVSYWIPKRV-SGPLEGLQVVSVACGTWHSALATSNGKLFTIGDGRFGVLGHGD 446

Query: 360 EIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVD--------TGSVYGFGWMGFGS---LG 408
                 P+ +  L  H A++V      +  +++        T +   F W G G    LG
Sbjct: 447 RDSVAYPKEVQLLSGHKAIKVACGVWHSAAIIEVMGPSGSNTSAKRLFTW-GDGDQYRLG 505

Query: 409 FPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLR 468
             ++   +  L P  + ++  ++  Q++ G   TV +T  G +F  G     QLG+    
Sbjct: 506 HVNK---ETYLEPTCVAAVAEYNFHQVACGYTMTVALTTSGHVFTMGGTAYGQLGNPNSD 562

Query: 469 G 469
           G
Sbjct: 563 G 563



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 63/236 (26%), Positives = 110/236 (46%), Gaps = 30/236 (12%)

Query: 114 MQITTGRYHTLL-ISNSSVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSAS 171
           + +  G +H+ L  SN  +F+ G    GVLGHG   +  V++ + +   S    ++V+  
Sbjct: 413 VSVACGTWHSALATSNGKLFTIGDGRFGVLGHGDRDS--VAYPKEVQLLSGHKAIKVACG 470

Query: 172 ENHAAFVLQ----------SGQVFTCGDNSSFCCGHRDTNRPIF-RPRLVEALKGVPCKQ 220
             H+A +++          + ++FT GD   +  GH   N+  +  P  V A+      Q
Sbjct: 471 VWHSAAIIEVMGPSGSNTSAKRLFTWGDGDQYRLGH--VNKETYLEPTCVAAVAEYNFHQ 528

Query: 221 VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV-----QIA 275
           V  G   T  LT  GHV T G   +GQLG+      P      P+   G +V     +I+
Sbjct: 529 VACGYTMTVALTTSGHVFTMGGTAYGQLGN------PNSDGKVPILVRGKLVGEFVEEIS 582

Query: 276 AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG 331
            G +++  +T    +Y++G G+N  LGHG+  D+  P  ++  + +  H+  +S G
Sbjct: 583 CGANHVAVLTSRSELYTWGRGANGRLGHGDTDDQKSPTMVEALKDR--HIKNISCG 636



 Score = 58.9 bits (141), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 48/172 (27%), Positives = 74/172 (43%), Gaps = 8/172 (4%)

Query: 308 DELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPE 367
           D L P+ +++     +H  ++  GD H+  +   G V+TWG+   G LGHG E D   P 
Sbjct: 290 DVLTPKPLESDVVLDVH--QIGPGDRHIALVTRQGEVFTWGEDSGGRLGHGFEKDFGRPH 347

Query: 368 PLSSLKSHLAVQVCARKRKTFVLVDTGSV--YGFGWMGFGSLGFPDRGVSDKVLRP-RIL 424
            + SL       V   +  +  +  +G +  +G G  G G LG    G       P R+ 
Sbjct: 348 LVESLAITNVTFVACGEYHSCAVSSSGDLFTWGDGTHGAGLLG---HGTDVSYWIPKRVS 404

Query: 425 DSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 476
             L    V  ++ G +H+ + T  G+LF  GD     LGH        P E+
Sbjct: 405 GPLEGLQVVSVACGTWHSALATSNGKLFTIGDGRFGVLGHGDRDSVAYPKEV 456



 Score = 38.5 bits (88), Expect = 7.0,   Method: Compositional matrix adjust.
 Identities = 34/124 (27%), Positives = 56/124 (45%), Gaps = 3/124 (2%)

Query: 115 QITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
           Q+  G   T+ ++ S  VF+ G +  G LG+ P +   V            V ++S   N
Sbjct: 528 QVACGYTMTVALTTSGHVFTMGGTAYGQLGN-PNSDGKVPILVRGKLVGEFVEEISCGAN 586

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
           H A +    +++T G  ++   GH DT+     P +VEALK    K ++ G  FT  + +
Sbjct: 587 HVAVLTSRSELYTWGRGANGRLGHGDTDDQK-SPTMVEALKDRHIKNISCGSTFTSCICL 645

Query: 234 RGHV 237
              V
Sbjct: 646 HKWV 649


>gi|432889733|ref|XP_004075335.1| PREDICTED: RCC1 and BTB domain-containing protein 2-like [Oryzias
           latipes]
          Length = 527

 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 80/275 (29%), Positives = 126/275 (45%), Gaps = 5/275 (1%)

Query: 128 NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS-ASENHAAFVLQSGQVFT 186
           N  VF+ G++  G LG G +    +   RI+      +V +S  +  H       G+VF 
Sbjct: 40  NDEVFALGTNCSGCLGLG-DLQSTIEPRRIDVLCGKKIVSLSYGTGPHVVIATADGEVFA 98

Query: 187 CGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHG 246
            G N     G+  TN  +    +   L G    +V  G + T  LT  G V   G N  G
Sbjct: 99  WGHNGYSQLGNGTTNHGLTPALVSTNLLGKRVTEVACGSHHTIALTADGEVFAWGYNNSG 158

Query: 247 QLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ 306
           Q+G G T ++PTP+ ++   +   VV +  G    +AV  NG +Y +G   N  LG G  
Sbjct: 159 QVGSGSTANQPTPRRVSSCLQSKVVVNVGCGQLCSMAVLDNGEIYGWGYNCNGQLGLGNN 218

Query: 307 HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP 366
            ++  P  I     +G++VV+V+ G  H +AL   G+VY WG    G LG G++ ++ LP
Sbjct: 219 GNQQTPCRIAAL--QGVNVVQVACGYAHTLALTDEGFVYAWGANSYGQLGTGNKSNQALP 276

Query: 367 EPLSSLKSHLA-VQVCARKRKTFVLVDTGSVYGFG 400
             +++ K  +  V  C     +     +G V  +G
Sbjct: 277 TLINTDKERMVEVAACHTSHTSAAKTQSGQVLMWG 311



 Score =  101 bits (252), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 71/237 (29%), Positives = 118/237 (49%), Gaps = 9/237 (3%)

Query: 230 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGSVVQIAAGPSYMLAVTGN 287
           ++T+   V   G+N  G LG GD      P+ I  L  +++ S+     GP  ++A T +
Sbjct: 36  YVTVNDEVFALGTNCSGCLGLGDLQSTIEPRRIDVLCGKKIVSL-SYGTGPHVVIA-TAD 93

Query: 288 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 347
           G V+++G      LG+G  +  L P  + T    G  V  V+ G  H +AL + G V+ W
Sbjct: 94  GEVFAWGHNGYSQLGNGTTNHGLTPALVST-NLLGKRVTEVACGSHHTIALTADGEVFAW 152

Query: 348 GKGYCGALGHGDEIDKTLPEPLSS-LKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGS 406
           G    G +G G   ++  P  +SS L+S + V V   +  +  ++D G +YG+G+   G 
Sbjct: 153 GYNNSGQVGSGSTANQPTPRRVSSCLQSKVVVNVGCGQLCSMAVLDNGEIYGWGYNCNGQ 212

Query: 407 LGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 463
           LG  + G      R   + +L+  +V Q++ G  HT+ +TD G ++ +G N   QLG
Sbjct: 213 LGLGNNGNQQTPCR---IAALQGVNVVQVACGYAHTLALTDEGFVYAWGANSYGQLG 266



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 80/291 (27%), Positives = 137/291 (47%), Gaps = 13/291 (4%)

Query: 170 ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
           ++ N A +V  + +VF  G N S C G  D    I  PR ++ L G     ++ G   TG
Sbjct: 29  SAANEALYVTVNDEVFALGTNCSGCLGLGDLQSTI-EPRRIDVLCGKKIVSLSYG---TG 84

Query: 230 ----FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 285
                 T  G V   G N + QLG+G T    TP  ++       V ++A G  + +A+T
Sbjct: 85  PHVVIATADGEVFAWGHNGYSQLGNGTTNHGLTPALVSTNLLGKRVTEVACGSHHTIALT 144

Query: 286 GNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVY 345
            +G V+++G  ++  +G G   ++  PR + +  +  + VV V  G    +A+  +G +Y
Sbjct: 145 ADGEVFAWGYNNSGQVGSGSTANQPTPRRVSSCLQSKV-VVNVGCGQLCSMAVLDNGEIY 203

Query: 346 TWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFG 405
            WG    G LG G+  ++  P  +++L+    VQV      T  L D G VY +G   +G
Sbjct: 204 GWGYNCNGQLGLGNNGNQQTPCRIAALQGVNVVQVACGYAHTLALTDEGFVYAWGANSYG 263

Query: 406 SLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVV-TDRGRLFGFG 455
            LG  ++  S++ L P ++++ +   V   +    HT    T  G++  +G
Sbjct: 264 QLGTGNK--SNQAL-PTLINTDKERMVEVAACHTSHTSAAKTQSGQVLMWG 311


>gi|443693194|gb|ELT94624.1| hypothetical protein CAPTEDRAFT_225863 [Capitella teleta]
          Length = 1384

 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 80/264 (30%), Positives = 122/264 (46%), Gaps = 21/264 (7%)

Query: 219 KQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGP 278
           + V  G      +T+   V T G  + GQLGHG+      P  +  L+   S++Q   G 
Sbjct: 544 RDVAVGSGHVIVITVERMVFTWGRGSKGQLGHGNLESCHVPSLVEGLKG-KSIIQARCGE 602

Query: 279 SYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRK-----GIHVVRVSAGDE 333
            + L  + NG++ + G G+  CLGHG+     +PR I+   R       + VV V+ G  
Sbjct: 603 EFSLFASDNGIIMTCGDGTAGCLGHGDWCSTSRPRLIEALLRDQLSLYSVDVVSVACGSH 662

Query: 334 HVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRK-TFVLVD 392
           HV  + S   V+TWG+G  G LG G E D   P+ ++ +  +L+++ C   R  T +L D
Sbjct: 663 HVCVVGSESEVFTWGRGKNGRLGLGSEQDFCQPQEVT-VPDNLSIKECHCGRDGTLLLTD 721

Query: 393 TGSVYGFGWMGFGSLGFPDRG----------VSDKVLRPRILDSLRA---HHVSQISTGL 439
            GS+   G      LG   R              +V   +I   +R    H V  IS G 
Sbjct: 722 VGSMLACGNNEGNKLGLNHRQGFLMAMKNIFTKTEVAEEKIFTPVRELCRHRVVDISLGP 781

Query: 440 YHTVVVTDRGRLFGFGDNERAQLG 463
           +H+ VV + G ++ FG N + QLG
Sbjct: 782 HHSAVVVEPGHVYTFGKNSKGQLG 805



 Score = 65.1 bits (157), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 72/273 (26%), Positives = 112/273 (41%), Gaps = 25/273 (9%)

Query: 116 ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           +  G  H ++I+    VF+ G    G LGHG     C   + +       ++Q    E  
Sbjct: 546 VAVGSGHVIVITVERMVFTWGRGSKGQLGHG-NLESCHVPSLVEGLKGKSIIQARCGEEF 604

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEAL-------KGVPCKQVTAGLNF 227
           + F   +G + TCGD ++ C GH D      RPRL+EAL         V    V  G + 
Sbjct: 605 SLFASDNGIIMTCGDGTAGCLGHGDWC-STSRPRLIEALLRDQLSLYSVDVVSVACGSHH 663

Query: 228 TGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN 287
              +     V T G   +G+LG G   D   P+ +   + + S+ +   G    L +T  
Sbjct: 664 VCVVGSESEVFTWGRGKNGRLGLGSEQDFCQPQEVTVPDNL-SIKECHCGRDGTLLLTDV 722

Query: 288 GVVYSFGS--GSNFCLGHGE----------QHDELQPRAIQTFRRKGIH--VVRVSAGDE 333
           G + + G+  G+   L H +             E+    I T  R+     VV +S G  
Sbjct: 723 GSMLACGNNEGNKLGLNHRQGFLMAMKNIFTKTEVAEEKIFTPVRELCRHRVVDISLGPH 782

Query: 334 HVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP 366
           H   +   G+VYT+GK   G LG G+  ++  P
Sbjct: 783 HSAVVVEPGHVYTFGKNSKGQLGTGNSKEQDAP 815



 Score = 58.5 bits (140), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 52/208 (25%), Positives = 89/208 (42%), Gaps = 12/208 (5%)

Query: 271 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 330
           +  +A G  +++ +T   +V+++G GS   LGHG       P  ++    KG  +++   
Sbjct: 543 IRDVAVGSGHVIVITVERMVFTWGRGSKGQLGHGNLESCHVPSLVEGL--KGKSIIQARC 600

Query: 331 GDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLS-------SLKSHLAVQVCAR 383
           G+E  +    +G + T G G  G LGHGD    + P  +        SL S   V V   
Sbjct: 601 GEEFSLFASDNGIIMTCGDGTAGCLGHGDWCSTSRPRLIEALLRDQLSLYSVDVVSVACG 660

Query: 384 KRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV 443
                V+     V+ +G    G LG    G      +P+ +       + +   G   T+
Sbjct: 661 SHHVCVVGSESEVFTWGRGKNGRLGL---GSEQDFCQPQEVTVPDNLSIKECHCGRDGTL 717

Query: 444 VVTDRGRLFGFGDNERAQLGHDTLRGCL 471
           ++TD G +   G+NE  +LG +  +G L
Sbjct: 718 LLTDVGSMLACGNNEGNKLGLNHRQGFL 745



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 72/290 (24%), Positives = 108/290 (37%), Gaps = 47/290 (16%)

Query: 102 HSSDIVETSAGN--MQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHG-------PETTQC 151
           H   +VE   G   +Q   G   +L  S N  + +CG    G LGHG       P   + 
Sbjct: 582 HVPSLVEGLKGKSIIQARCGEEFSLFASDNGIIMTCGDGTAGCLGHGDWCSTSRPRLIEA 641

Query: 152 VSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCG--DNSSFCCGHRDTNRPIFRPRL 209
           +   +++  S   VV V+   +H   V    +VFT G   N     G   + +   +P+ 
Sbjct: 642 LLRDQLSLYSV-DVVSVACGSHHVCVVGSESEVFTWGRGKNGRLGLG---SEQDFCQPQE 697

Query: 210 VEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHG-------------DTLDR 256
           V     +  K+   G + T  LT  G +  CG+N   +LG                  + 
Sbjct: 698 VTVPDNLSIKECHCGRDGTLLLTDVGSMLACGNNEGNKLGLNHRQGFLMAMKNIFTKTEV 757

Query: 257 PTPKSIAPLEEV--GSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRA 314
              K   P+ E+    VV I+ GP +   V   G VY+FG  S   LG G   ++  P  
Sbjct: 758 AEEKIFTPVRELCRHRVVDISLGPHHSAVVVEPGHVYTFGKNSKGQLGTGNSKEQDAPIQ 817

Query: 315 IQTFRRKGIHVV----------------RVSAGDEHVVALDSSGYVYTWG 348
           ++ F  K   V                 RV  G+ + VA      +Y WG
Sbjct: 818 VKAFEDKPAFVCKFLCYVAFSEICSSLQRVRCGESYTVAGTVDNGLYFWG 867



 Score = 53.5 bits (127), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 40/158 (25%), Positives = 70/158 (44%), Gaps = 10/158 (6%)

Query: 328 VSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKT 387
           V+ G  HV+ +     V+TWG+G  G LGHG+     +P  +  LK    +Q    +  +
Sbjct: 546 VAVGSGHVIVITVERMVFTWGRGSKGQLGHGNLESCHVPSLVEGLKGKSIIQARCGEEFS 605

Query: 388 FVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVS-------QISTGLY 440
               D G +   G    G LG  D   +    RPR++++L    +S        ++ G +
Sbjct: 606 LFASDNGIIMTCGDGTAGCLGHGDWCSTS---RPRLIEALLRDQLSLYSVDVVSVACGSH 662

Query: 441 HTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFI 478
           H  VV     +F +G  +  +LG  + +   +P E+ +
Sbjct: 663 HVCVVGSESEVFTWGRGKNGRLGLGSEQDFCQPQEVTV 700


>gi|449268693|gb|EMC79542.1| X-linked retinitis pigmentosa GTPase regulator, partial [Columba
           livia]
          Length = 719

 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 92/302 (30%), Positives = 140/302 (46%), Gaps = 15/302 (4%)

Query: 166 VQVSASENHAAFVLQSGQVFTCGDNS--SFCCGHRDTNRPIFRPRLVEALKGVPCKQVTA 223
           V +S  + H A V  +G+++  G N+      G ++T   + +P  V+ALK    K    
Sbjct: 33  VLISCGDEHTAIVTGNGKLYMFGSNNWGQLGLGSKNT---VSKPTCVKALKPEKTKLAVC 89

Query: 224 GLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
           G N T   T +G+V+  G N+ GQLG GDT +R T   I+       + Q+AAG     A
Sbjct: 90  GRNHTLVYTEKGNVYAAGGNSEGQLGLGDTEERSTFHLISFFTNQHKIKQLAAGSYTSAA 149

Query: 284 VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 343
           VT +G ++ +G  S   +G  ++     P  +      G  V  +S G  H   +   G 
Sbjct: 150 VTEDGQLFVWGDNSEGQIGLADEACVSVPCQVDV----GKPVSSISCGYYHSALITGDGE 205

Query: 344 VYTWGKGYCGALGHGDEIDKT--LPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGW 401
           +YT+G+   G LG   E  K   +P+P+  +   +    C  +  T VL +T  VY FG 
Sbjct: 206 LYTFGEPENGKLGLLPEQLKNNRVPQPVPGIMEKVNKVACGGEH-TVVLTET-DVYTFGL 263

Query: 402 MGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQ 461
             +G LG         V  P+ +  LR H +  I+ G  HT VV + G +F FGD    +
Sbjct: 264 GQYGQLGHGTFIFETSV--PKSVKHLRRHKICNITCGENHTAVVAENGLMFTFGDGRHGK 321

Query: 462 LG 463
           LG
Sbjct: 322 LG 323



 Score = 75.9 bits (185), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 73/259 (28%), Positives = 122/259 (47%), Gaps = 38/259 (14%)

Query: 119 GRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVV-QVSASENHAA 176
           GR HTL+ +   +V++ G +  G LG G +T +  +F  I+F +  H + Q++A    +A
Sbjct: 90  GRNHTLVYTEKGNVYAAGGNSEGQLGLG-DTEERSTFHLISFFTNQHKIKQLAAGSYTSA 148

Query: 177 FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCK--------QVTAGLNFT 228
            V + GQ+F  GDNS    G  D           EA   VPC+         ++ G   +
Sbjct: 149 AVTEDGQLFVWGDNSEGQIGLAD-----------EACVSVPCQVDVGKPVSSISCGYYHS 197

Query: 229 GFLTIRGHVHTCGSNTHGQLG------HGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 282
             +T  G ++T G   +G+LG        + + +P P  +        V ++A G  + +
Sbjct: 198 ALITGDGELYTFGEPENGKLGLLPEQLKNNRVPQPVPGIME------KVNKVACGGEHTV 251

Query: 283 AVTGNGVVYSFGSGSNFCLGHGEQHDELQ-PRAIQTFRRKGIHVVRVSAGDEHVVALDSS 341
            +T   V Y+FG G    LGHG    E   P++++  RR  I    ++ G+ H   +  +
Sbjct: 252 VLTETDV-YTFGLGQYGQLGHGTFIFETSVPKSVKHLRRHKI--CNITCGENHTAVVAEN 308

Query: 342 GYVYTWGKGYCGALGHGDE 360
           G ++T+G G  G LG G+E
Sbjct: 309 GLMFTFGDGRHGKLGLGEE 327


>gi|391347040|ref|XP_003747773.1| PREDICTED: X-linked retinitis pigmentosa GTPase regulator-like
           [Metaseiulus occidentalis]
          Length = 523

 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 101/374 (27%), Positives = 165/374 (44%), Gaps = 20/374 (5%)

Query: 114 MQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           + +  G  H++ I+ S   FS GS+  G LGHG  T   V+   +        + V+   
Sbjct: 45  ISVACGDQHSVFITASGRTFSFGSNDYGQLGHG-HTKALVNPRCVKALKDKRAILVACGR 103

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
           +H        +V+  G NS    G + +      P+LV  L GV  K +TAG + +  L+
Sbjct: 104 SHTLVATDDKKVYAFGINSEHQLGVKSSAAYHADPQLVATLNGVQVKALTAGADHSLALS 163

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
            +G V+  GS+ HGQLG G    R  P     L+  G  + I+AG  +   V  +GV+Y+
Sbjct: 164 AKGIVYLWGSSEHGQLGLGRKKQRKLP---VQLKTEGKAIAISAGAYHSAYVNTDGVLYT 220

Query: 293 FGSGSNFCLGHGEQHDELQPRAIQTFRR----KGIHVVRVSAGDEHVVALDSSGYVYTWG 348
           FG        HG+    L P+  +   +    +G+ V  V+ G  H VAL   G  Y++G
Sbjct: 221 FGETE-----HGKLGTNLAPKKCRKPSKVPDIQGL-VTSVACGGSHTVALTCDGRAYSFG 274

Query: 349 KGYCGALGHGDEIDKTLPEPLSSLKSHLAV-QVCARKRKTFVLVDTGSVYGFGWMGFGSL 407
            G  G LG G  +       L  + + + + +V A +  T  L +   +Y  G    G L
Sbjct: 275 DGSQGQLGLGQRVTHAGRPHLIQMPTGVKMARVSAGQSHTAFLSEGRQMYTCGEGRHGKL 334

Query: 408 GFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTL 467
              D  +      P ++D L    V Q+S G  HT+V+     + G  D +  ++G   +
Sbjct: 335 ALEDGEMGSNKFSPMLVDILSLFQVQQVSCGGCHTLVLV----VPGLTDPQGNRMGDSPI 390

Query: 468 RGCLEPTEIFIQEM 481
              ++ TE+ +  +
Sbjct: 391 SAAVQATELTLARL 404



 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 62/245 (25%), Positives = 97/245 (39%), Gaps = 56/245 (22%)

Query: 270 SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRK-------- 321
           +V+ +A G  + + +T +G  +SFGS     LGHG     + PR ++  + K        
Sbjct: 43  AVISVACGDQHSVFITASGRTFSFGSNDYGQLGHGHTKALVNPRCVKALKDKRAILVACG 102

Query: 322 -------------------------------------------GIHVVRVSAGDEHVVAL 338
                                                      G+ V  ++AG +H +AL
Sbjct: 103 RSHTLVATDDKKVYAFGINSEHQLGVKSSAAYHADPQLVATLNGVQVKALTAGADHSLAL 162

Query: 339 DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYG 398
            + G VY WG    G LG G +  + LP  L +    +A+   A     +V  D G +Y 
Sbjct: 163 SAKGIVYLWGSSEHGQLGLGRKKQRKLPVQLKTEGKAIAISAGAY-HSAYVNTD-GVLYT 220

Query: 399 FGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNE 458
           FG    G LG        K  +P  +  ++   V+ ++ G  HTV +T  GR + FGD  
Sbjct: 221 FGETEHGKLG--TNLAPKKCRKPSKVPDIQG-LVTSVACGGSHTVALTCDGRAYSFGDGS 277

Query: 459 RAQLG 463
           + QLG
Sbjct: 278 QGQLG 282



 Score = 65.5 bits (158), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 47/168 (27%), Positives = 76/168 (45%), Gaps = 6/168 (3%)

Query: 296 GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGAL 355
           G+ F  G  +  D L      TF  K   V+ V+ GD+H V + +SG  +++G    G L
Sbjct: 19  GAVFTFGKSKFSDNLPG----TFWVKNDAVISVACGDQHSVFITASGRTFSFGSNDYGQL 74

Query: 356 GHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVS 415
           GHG       P  + +LK   A+ V   +  T V  D   VY FG      LG       
Sbjct: 75  GHGHTKALVNPRCVKALKDKRAILVACGRSHTLVATDDKKVYAFGINSEHQLGVKSSAAY 134

Query: 416 DKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 463
                P+++ +L    V  ++ G  H++ ++ +G ++ +G +E  QLG
Sbjct: 135 HA--DPQLVATLNGVQVKALTAGADHSLALSAKGIVYLWGSSEHGQLG 180


>gi|50543738|ref|XP_500035.1| YALI0A13299p [Yarrowia lipolytica]
 gi|49645900|emb|CAG83964.1| YALI0A13299p [Yarrowia lipolytica CLIB122]
          Length = 498

 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 101/393 (25%), Positives = 165/393 (41%), Gaps = 58/393 (14%)

Query: 131 VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDN 190
           VF+ G+     LG GPE    V   R++   +  +V ++    H   +   G+V++ G N
Sbjct: 90  VFAFGTGDMCELGLGPEKASTVKRPRLSPYLSKEIVDIAVGGQHGLVLDSQGRVWSWGGN 149

Query: 191 SSFCCGHRDTNRPIFR------------PRLVEALKGVPC--------KQVTAGLNFTGF 230
                G   +   + +            P+L  A + +P          ++ A  + +  
Sbjct: 150 DLGALGRDTSGHEVLKDMDADESDDEDDPKLNPA-ESIPALVDTDQRFVKIEASDSLSLA 208

Query: 231 LTIRGHVHTCGS--NTHGQLGHGDTL---DRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 285
           LT  G V   GS  N+ G +G  D +   +RP       +EE+ ++  IAAG  ++LA+T
Sbjct: 209 LTAEGDVWAWGSFRNSQGTMGFSDKVKVQNRPVK-----IEELSNIAAIAAGRDHVLALT 263

Query: 286 GNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGI-HVVRVSAGDEHVVALDSSGYV 344
             G V+++G   NF LG       L PR +      G+ ++V V AG+ H  A+D+ G V
Sbjct: 264 QWGTVHTWGDSENFRLGWKSNRSTLSPREL------GLKNIVYVGAGEFHSFAIDTDGKV 317

Query: 345 YTWG---KGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGW 401
             WG    G CG LG  D      P  + +L     V V   +  +  L   G+VY FG 
Sbjct: 318 LAWGLNQYGQCGILGQSDNAAVDGPTYVDALDGKDIVAVTGGEHHSLALSKDGTVYSFGR 377

Query: 402 MGFGSLGF-----PDRGVSDKVLRPRIL------------DSLRAHHVSQISTGLYHTVV 444
             +  +GF     P+  V D    PR L            D  +   +  I+ G +H+++
Sbjct: 378 YDYHQIGFTTKDLPEGTVRDDKGNPRFLPVPSPLSLGGEDDDEKLPKMRFIACGAHHSLI 437

Query: 445 VTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF 477
           +   GR++ +G +   Q GH        P +I 
Sbjct: 438 IDVDGRVWTWGFSSSFQTGHAEEDDVETPRKIM 470



 Score = 62.0 bits (149), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 69/263 (26%), Positives = 118/263 (44%), Gaps = 50/263 (19%)

Query: 255 DRPTPKSIAPLEEVGSVVQIAA--GPSYMLAVTGNGV---VYSFGSGSNFCLGHGEQHDE 309
           ++P P + AP     S +Q      P+ +   + N V   V++FG+G    LG G     
Sbjct: 50  EKPIPAAKAPSRLRLSAIQRKHKHSPTLLPLPSINKVDCEVFAFGTGDMCELGLG----- 104

Query: 310 LQPRAIQTFRRKGI------HVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH---GDE 360
             P    T +R  +       +V ++ G +H + LDS G V++WG    GALG    G E
Sbjct: 105 --PEKASTVKRPRLSPYLSKEIVDIAVGGQHGLVLDSQGRVWSWGGNDLGALGRDTSGHE 162

Query: 361 IDKTL----------PE--PLSSLKSHLA-----VQVCARKRKTFVLVDTGSVYGFGWM- 402
           + K +          P+  P  S+ + +      V++ A    +  L   G V+ +G   
Sbjct: 163 VLKDMDADESDDEDDPKLNPAESIPALVDTDQRFVKIEASDSLSLALTAEGDVWAWGSFR 222

Query: 403 -GFGSLGFPDRGVSDKVL---RPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNE 458
              G++GF     SDKV    RP  ++ L   +++ I+ G  H + +T  G +  +GD+E
Sbjct: 223 NSQGTMGF-----SDKVKVQNRPVKIEEL--SNIAAIAAGRDHVLALTQWGTVHTWGDSE 275

Query: 459 RAQLGHDTLRGCLEPTEIFIQEM 481
             +LG  + R  L P E+ ++ +
Sbjct: 276 NFRLGWKSNRSTLSPRELGLKNI 298



 Score = 52.0 bits (123), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 53/194 (27%), Positives = 82/194 (42%), Gaps = 21/194 (10%)

Query: 164 HVVQVSASENHAAFVLQSGQVFTCGDNSSFCCG--HRDTNRPIFRPRLVEALKGVPCKQV 221
           ++V V A E H+  +   G+V   G N    CG   +  N  +  P  V+AL G     V
Sbjct: 297 NIVYVGAGEFHSFAIDTDGKVLAWGLNQYGQCGILGQSDNAAVDGPTYVDALDGKDIVAV 356

Query: 222 TAGLNFTGFLTIRGHVHTCGSNTHGQLG-------HGDTLDR---------PTPKSIA-- 263
           T G + +  L+  G V++ G   + Q+G        G   D          P+P S+   
Sbjct: 357 TGGEHHSLALSKDGTVYSFGRYDYHQIGFTTKDLPEGTVRDDKGNPRFLPVPSPLSLGGE 416

Query: 264 -PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKG 322
              E++  +  IA G  + L +  +G V+++G  S+F  GH E+ D   PR I     K 
Sbjct: 417 DDDEKLPKMRFIACGAHHSLIIDVDGRVWTWGFSSSFQTGHAEEDDVETPRKIMNTAIKP 476

Query: 323 IHVVRVSAGDEHVV 336
           I V     G +  V
Sbjct: 477 IDVKMAGGGGQFSV 490


>gi|67617767|ref|XP_667559.1| hect domain and RLD 2 [Cryptosporidium hominis TU502]
 gi|54658712|gb|EAL37335.1| hect domain and RLD 2 [Cryptosporidium hominis]
          Length = 1878

 Score =  110 bits (274), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 94/349 (26%), Positives = 157/349 (44%), Gaps = 35/349 (10%)

Query: 125 LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ---- 180
           L +   +++ G +   VLG G E  +     ++NF SA  V QVS   +H A +++    
Sbjct: 55  LKNKGQLYAWGVNTNNVLGLGIENGEFNFPMKVNFFSALEVFQVSCGYSHTAVLVKGISE 114

Query: 181 -SGQVFTCG----DNSSFCCGHRDTNRPIFRPRLVEA-LKGVPC----------KQVTAG 224
            SG+V+T G        +  GH +      +  L E+    +PC           +++ G
Sbjct: 115 ASGRVYTMGLGDRGRLGYTRGHTEFGNEHDKNDLNESWYTPIPCIVNFPFNAKISRISCG 174

Query: 225 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 284
            N +  L+  G V   G   +G LG G+  D  +P  I        V+ IAAG  + L  
Sbjct: 175 ANHSLALSDSGLVFAWGIGQYGCLGTGELNDVYSPVKIEAGPTDKKVLHIAAGARHSLCC 234

Query: 285 TGNGVVYSFGSGSNFCLGHGEQHD-ELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 343
             +G V+++GS SN  LG G  +  +  P  I++  +   H+  V+AG+ H   +DS GY
Sbjct: 235 NEDGQVFAWGSNSNGRLGTGGSYGMKTVPTQIKSLSQ--YHITLVAAGESHSGCIDSFGY 292

Query: 344 VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 403
           +YTWG G  G LGHG + D  +P  +  + S   VQ+      +  L  +G VY +G   
Sbjct: 293 IYTWGNGGSGKLGHGTQSDCNIPRRIEGISSLPFVQLTLGAFNSMALSQSGEVYIWGAKQ 352

Query: 404 FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLF 452
              +  P +           +D+  + H+  I++G Y +  +  R  ++
Sbjct: 353 HEIISLPTK-----------IDAFDS-HICHINSGPYISFAMDVRHNIY 389



 Score = 69.3 bits (168), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 66/264 (25%), Positives = 109/264 (41%), Gaps = 24/264 (9%)

Query: 234 RGHVHTCGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT-----GN 287
           +G ++  G NT+  LG G +  +   P  +     +  V Q++ G S+   +       +
Sbjct: 58  KGQLYAWGVNTNNVLGLGIENGEFNFPMKVNFFSAL-EVFQVSCGYSHTAVLVKGISEAS 116

Query: 288 GVVYSFGSGSNFCLGH-------GEQHDE-------LQPRAIQTFRRKGIHVVRVSAGDE 333
           G VY+ G G    LG+       G +HD+         P            + R+S G  
Sbjct: 117 GRVYTMGLGDRGRLGYTRGHTEFGNEHDKNDLNESWYTPIPCIVNFPFNAKISRISCGAN 176

Query: 334 HVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAV-QVCARKRKTFVLVD 392
           H +AL  SG V+ WG G  G LG G+  D   P  + +  +   V  + A  R +    +
Sbjct: 177 HSLALSDSGLVFAWGIGQYGCLGTGELNDVYSPVKIEAGPTDKKVLHIAAGARHSLCCNE 236

Query: 393 TGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLF 452
            G V+ +G    G LG    G       P  + SL  +H++ ++ G  H+  +   G ++
Sbjct: 237 DGQVFAWGSNSNGRLG--TGGSYGMKTVPTQIKSLSQYHITLVAAGESHSGCIDSFGYIY 294

Query: 453 GFGDNERAQLGHDTLRGCLEPTEI 476
            +G+    +LGH T   C  P  I
Sbjct: 295 TWGNGGSGKLGHGTQSDCNIPRRI 318



 Score = 65.5 bits (158), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 85/396 (21%), Positives = 155/396 (39%), Gaps = 55/396 (13%)

Query: 114 MQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           + I  G  H+L  + +  VF+ GS+  G LG G         T+I   S  H+  V+A E
Sbjct: 222 LHIAAGARHSLCCNEDGQVFAWGSNSNGRLGTGGSYGMKTVPTQIKSLSQYHITLVAAGE 281

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
           +H+  +   G ++T G+  S   GH  T      PR +E +  +P  Q+T G   +  L+
Sbjct: 282 SHSGCIDSFGYIYTWGNGGSGKLGH-GTQSDCNIPRRIEGISSLPFVQLTLGAFNSMALS 340

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
             G V+  G+  H  +          P  I   +    +  I +GP    A+     +Y 
Sbjct: 341 QSGEVYIWGAKQHEIIS--------LPTKIDAFDS--HICHINSGPYISFAMDVRHNIYL 390

Query: 293 FGSGSNFCLGHGEQHDELQPRAIQTFRRK------------------------GIHVVRV 328
           +   +N  L + ++ + L     Q ++R                         G ++V  
Sbjct: 391 W---NNRLLVNSKKSEALNANEEQLYKRMNSKNPVLLPFFQSKAFVDDCIFYMGFNLVDY 447

Query: 329 SAGDEHVVALDSSGYVYTWGKGY--CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRK 386
             G++      S G +++  + Y   G+   G  +   +P       S    Q+      
Sbjct: 448 K-GNKVSYEPKSEGGLFSVNRIYKSNGSSEIGSLVGSQIP-------SWSVRQIACGTSH 499

Query: 387 TFVLVDTGSVYGFGWMGFGSLGFPDR------GVSDKVLRPRILDSLRAHHVSQISTGLY 440
           T +LV  G+++ +G   +G LG   R      G  ++       +   +  + +++ G +
Sbjct: 500 TLLLVYGGTIFAWGDNKYGQLGIDTRRRKSQDGDKNESFLNEPTEIKFSEPIRRVACGSW 559

Query: 441 HTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 476
           H++    +G  F +G  +R QLG   +R   EP  I
Sbjct: 560 HSLCCDIKGNCFSWGRGDRGQLGTGAIRNLYEPAGI 595



 Score = 62.4 bits (150), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 58/213 (27%), Positives = 89/213 (41%), Gaps = 25/213 (11%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNR---------PIFRPRLVEALKG 215
           V Q++   +H   ++  G +F  GDN     G  DT R           F     E    
Sbjct: 490 VRQIACGTSHTLLLVYGGTIFAWGDNKYGQLG-IDTRRRKSQDGDKNESFLNEPTEIKFS 548

Query: 216 VPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA 275
            P ++V  G   +    I+G+  + G    GQLG G   +   P  I  L+   +V+++A
Sbjct: 549 EPIRRVACGSWHSLCCDIKGNCFSWGRGDRGQLGTGAIRNLYEPAGIVTLK---NVIEVA 605

Query: 276 AGPSYMLAV-----TGNGVVYSFGSGSNFCLGHGEQH-----DELQPRAIQTFRRK--GI 323
            G  Y   +     TGN  + +  SG  +  G G+       D +    I   R    G 
Sbjct: 606 GGELYSACIVACITTGNKDLDTINSGDLWIWGDGDLGKLGLGDHVLKSCIAAPRHLNLGT 665

Query: 324 HVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 356
            +++V+ G  H +AL +SG + TWG GY G LG
Sbjct: 666 PIIKVALGSSHTLALTASGELITWGAGYYGRLG 698



 Score = 56.2 bits (134), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 55/229 (24%), Positives = 97/229 (42%), Gaps = 28/229 (12%)

Query: 270 SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLG---------HGEQHDEL--QPRAIQTF 318
           SV QIA G S+ L +   G ++++G      LG          G++++    +P  I+ F
Sbjct: 489 SVRQIACGTSHTLLLVYGGTIFAWGDNKYGQLGIDTRRRKSQDGDKNESFLNEPTEIK-F 547

Query: 319 RRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK----- 373
                 + RV+ G  H +  D  G  ++WG+G  G LG G   +   P  + +LK     
Sbjct: 548 SEP---IRRVACGSWHSLCCDIKGNCFSWGRGDRGQLGTGAIRNLYEPAGIVTLKNVIEV 604

Query: 374 ------SHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSL 427
                 S   V       K    +++G ++ +G    G LG  D  +   +  PR L+  
Sbjct: 605 AGGELYSACIVACITTGNKDLDTINSGDLWIWGDGDLGKLGLGDHVLKSCIAAPRHLN-- 662

Query: 428 RAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 476
               + +++ G  HT+ +T  G L  +G     +LG ++ +    P +I
Sbjct: 663 LGTPIIKVALGSSHTLALTASGELITWGAGYYGRLGTNSTKSHSNPIKI 711



 Score = 55.5 bits (132), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 87/395 (22%), Positives = 156/395 (39%), Gaps = 62/395 (15%)

Query: 115 QITTGRYHTLL-ISNSSVFSCGSSLCGVLG------HGPETTQCVSF----TRINFPSAA 163
           QI  G  HTLL +   ++F+ G +  G LG         +  +  SF    T I F    
Sbjct: 492 QIACGTSHTLLLVYGGTIFAWGDNKYGQLGIDTRRRKSQDGDKNESFLNEPTEIKFSEP- 550

Query: 164 HVVQVSASENHAAFVLQSGQVFTCG--DNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQV 221
            + +V+    H+      G  F+ G  D      G     R ++ P  +  LK V   +V
Sbjct: 551 -IRRVACGSWHSLCCDIKGNCFSWGRGDRGQLGTG---AIRNLYEPAGIVTLKNV--IEV 604

Query: 222 TAGLNFTGFL------------TIR-GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEV 268
             G  ++  +            TI  G +   G    G+LG GD + +    +   L   
Sbjct: 605 AGGELYSACIVACITTGNKDLDTINSGDLWIWGDGDLGKLGLGDHVLKSCIAAPRHLNLG 664

Query: 269 GSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRV 328
             ++++A G S+ LA+T +G + ++G+G    LG         P  I+ F  KG+ +V +
Sbjct: 665 TPIIKVALGSSHTLALTASGELITWGAGYYGRLGTNSTKSHSNPIKIR-FPIKGVQIVDI 723

Query: 329 SAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAV----QVCARK 384
           + G  H +A+ S G ++ WGK    A     E D   P   + L+S   +     + A  
Sbjct: 724 AVGSYHSMAVSSLGDLWVWGK----AENVLSEKDVLTPYIFAKLESPSGIPRIYSIHAFG 779

Query: 385 RKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAH-----------HVS 433
             ++ +  +G ++ +G         P+   ++ +        +++H           +  
Sbjct: 780 DVSYAITQSGVLWIWG---------PENSETENIQGLETSIKIKSHTGRAEMIVLPGNAI 830

Query: 434 QISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLR 468
            +S    H V +   G +  +GD  R +LG   +R
Sbjct: 831 GVSGSTTHHVCLLASGEVVSWGDPSRGKLGQQDIR 865


>gi|291221016|ref|XP_002730519.1| PREDICTED: predicted protein-like, partial [Saccoglossus
           kowalevskii]
          Length = 353

 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 96/332 (28%), Positives = 155/332 (46%), Gaps = 27/332 (8%)

Query: 146 PETTQCVSFTRI----NFPSAAHV-----VQVSASENHAAFVLQSGQVFTCGDNS--SFC 194
           PET    +F +     N PS   +     + +S  + H+A + +SG+++T G N      
Sbjct: 10  PETGAIFTFGKSRFADNLPSKFWIRNDKAMHISCGDEHSAIITESGRLYTFGSNDWGQLG 69

Query: 195 CGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTL 254
            GH    +P  +P  V++LK      V  G + T   T  G +++ G+ + GQLG GD  
Sbjct: 70  LGHM---KPTTKPGCVKSLKQEGVNLVACGRSHTIVCTKAGRLYSFGAGSDGQLGTGDAQ 126

Query: 255 DRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRA 314
              +P+ I   E+   +  ++AG  +  A+T +G +Y +GSGS   LG G       P+ 
Sbjct: 127 CATSPQLINLPEQKYKL--LSAGTDHSAALTTDGTLYMWGSGSEGQLGLGNTDSVETPKE 184

Query: 315 IQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEI--DKTLPEPLSSL 372
           ++        V  VS G  H   +   G +YT+G+   G LG  ++   D T P+ + S+
Sbjct: 185 LKFHSS----VSWVSCGYYHTAIVTDDGKLYTFGEKEFGKLGLTEDQLEDTTTPKHVESI 240

Query: 373 KSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLR-PRILDSLRAHH 431
              + +  C     T V+ D G++Y FG    G LG    G S   L  P+ +  L  H 
Sbjct: 241 TEKIKLVACGGAH-TAVISDVGNLYTFGDGMHGQLG---NGPSLLQLSLPQKVARLSEHK 296

Query: 432 VSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 463
              +S G  HT V+T++G ++ FGD    +LG
Sbjct: 297 CKYVSCGDNHTAVITEKGAMYTFGDGRHGKLG 328



 Score =  109 bits (272), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 80/245 (32%), Positives = 121/245 (49%), Gaps = 10/245 (4%)

Query: 221 VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 280
           ++ G   +  +T  G ++T GSN  GQLG G       P  +  L++ G V  +A G S+
Sbjct: 41  ISCGDEHSAIITESGRLYTFGSNDWGQLGLGHMKPTTKPGCVKSLKQEG-VNLVACGRSH 99

Query: 281 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 340
            +  T  G +YSFG+GS+  LG G+      P+ I    +K      +SAG +H  AL +
Sbjct: 100 TIVCTKAGRLYSFGAGSDGQLGTGDAQCATSPQLINLPEQK---YKLLSAGTDHSAALTT 156

Query: 341 SGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQ-VCARKRKTFVLVDTGSVYGF 399
            G +Y WG G  G LG G+      P+    LK H +V  V      T ++ D G +Y F
Sbjct: 157 DGTLYMWGSGSEGQLGLGNTDSVETPK---ELKFHSSVSWVSCGYYHTAIVTDDGKLYTF 213

Query: 400 GWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNER 459
           G   FG LG  +  + D    P+ ++S+    +  ++ G  HT V++D G L+ FGD   
Sbjct: 214 GEKEFGKLGLTEDQLED-TTTPKHVESI-TEKIKLVACGGAHTAVISDVGNLYTFGDGMH 271

Query: 460 AQLGH 464
            QLG+
Sbjct: 272 GQLGN 276



 Score = 86.3 bits (212), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 87/316 (27%), Positives = 146/316 (46%), Gaps = 22/316 (6%)

Query: 114 MQITTGRYHTLLISNSS-VFSCGSSLCGVLG--HGPETTQ--CVSFTRINFPSAAHVVQV 168
           M I+ G  H+ +I+ S  +++ GS+  G LG  H   TT+  CV   +        V  V
Sbjct: 39  MHISCGDEHSAIITESGRLYTFGSNDWGQLGLGHMKPTTKPGCVKSLK-----QEGVNLV 93

Query: 169 SASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFT 228
           +   +H     ++G++++ G  S    G  D       P+L+  L     K ++AG + +
Sbjct: 94  ACGRSHTIVCTKAGRLYSFGAGSDGQLGTGDAQCAT-SPQLIN-LPEQKYKLLSAGTDHS 151

Query: 229 GFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG 288
             LT  G ++  GS + GQLG G+T    TPK    L+   SV  ++ G  +   VT +G
Sbjct: 152 AALTTDGTLYMWGSGSEGQLGLGNTDSVETPKE---LKFHSSVSWVSCGYYHTAIVTDDG 208

Query: 289 VVYSFGSGSNFCLGHGEQH--DELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYT 346
            +Y+FG      LG  E    D   P+ +++   K   +  V+ G  H   +   G +YT
Sbjct: 209 KLYTFGEKEFGKLGLTEDQLEDTTTPKHVESITEK---IKLVACGGAHTAVISDVGNLYT 265

Query: 347 WGKGYCGALGHGDEIDK-TLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFG 405
           +G G  G LG+G  + + +LP+ ++ L  H    V      T V+ + G++Y FG    G
Sbjct: 266 FGDGMHGQLGNGPSLLQLSLPQKVARLSEHKCKYVSCGDNHTAVITEKGAMYTFGDGRHG 325

Query: 406 SLGFPDRGVSDKVLRP 421
            LG  +    + + +P
Sbjct: 326 KLGISEEDFCN-IFKP 340



 Score = 85.9 bits (211), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 63/209 (30%), Positives = 103/209 (49%), Gaps = 12/209 (5%)

Query: 271 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 330
            + I+ G  +   +T +G +Y+FGS     LG G      +P  +++ +++G+++V  + 
Sbjct: 38  AMHISCGDEHSAIITESGRLYTFGSNDWGQLGLGHMKPTTKPGCVKSLKQEGVNLV--AC 95

Query: 331 GDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVL 390
           G  H +    +G +Y++G G  G LG GD    T P+ L +L       + A    +  L
Sbjct: 96  GRSHTIVCTKAGRLYSFGAGSDGQLGTGDAQCATSPQ-LINLPEQKYKLLSAGTDHSAAL 154

Query: 391 VDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHH-VSQISTGLYHTVVVTDRG 449
              G++Y +G    G LG    G +D V  P+    L+ H  VS +S G YHT +VTD G
Sbjct: 155 TTDGTLYMWGSGSEGQLGL---GNTDSVETPK---ELKFHSSVSWVSCGYYHTAIVTDDG 208

Query: 450 RLFGFGDNERAQLG--HDTLRGCLEPTEI 476
           +L+ FG+ E  +LG   D L     P  +
Sbjct: 209 KLYTFGEKEFGKLGLTEDQLEDTTTPKHV 237



 Score = 49.3 bits (116), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 35/142 (24%), Positives = 62/142 (43%), Gaps = 13/142 (9%)

Query: 341 SGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 400
           +G ++T+GK               LP     +++  A+ +      + ++ ++G +Y FG
Sbjct: 12  TGAIFTFGK---------SRFADNLPSKFW-IRNDKAMHISCGDEHSAIITESGRLYTFG 61

Query: 401 WMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERA 460
              +G LG    G      +P  + SL+   V+ ++ G  HT+V T  GRL+ FG     
Sbjct: 62  SNDWGQLGL---GHMKPTTKPGCVKSLKQEGVNLVACGRSHTIVCTKAGRLYSFGAGSDG 118

Query: 461 QLGHDTLRGCLEPTEIFIQEME 482
           QLG    +    P  I + E +
Sbjct: 119 QLGTGDAQCATSPQLINLPEQK 140


>gi|157821577|ref|NP_001101850.1| RCC1 and BTB domain-containing protein 1 [Rattus norvegicus]
 gi|149064107|gb|EDM14377.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
           containing protein 1 [Rattus norvegicus]
          Length = 531

 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 76/254 (29%), Positives = 125/254 (49%), Gaps = 9/254 (3%)

Query: 230 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGSVVQIAAGPSYMLAVTGN 287
           ++T    V   G N    LG GD      PK +  L  + + S+    +GP  +L+ T +
Sbjct: 36  YVTDSDEVFVFGLNYSNCLGTGDNQSTLVPKKLEALCGKRIKSL-SYGSGPHVLLS-TED 93

Query: 288 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 347
           GVVY++G      LG+G  +  + P  + T       VV V+ G  H +AL + G ++ W
Sbjct: 94  GVVYAWGHNGYSQLGNGTTNQGIAPIQVCT-NLLVKQVVEVACGSHHSMALAADGELFAW 152

Query: 348 GKGYCGALGHGDEIDKTLPEPLSS-LKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGS 406
           G   CG +G G   ++  P  +++ L +   V +   +  +  ++D+G VYG+G+ G G 
Sbjct: 153 GYNNCGQVGSGSTANQPTPRKVTNCLHTKKVVNIACGQTSSMAVLDSGEVYGWGYNGNGQ 212

Query: 407 LGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDT 466
           LG  + G     L P  + +L    V+QI  G  HT+ +TD G L+ +G N   QLG  +
Sbjct: 213 LGLGNNG---NQLTPVRVAALHGVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGS 269

Query: 467 LRGCLEPTEIFIQE 480
               L PT+I +++
Sbjct: 270 KNNLLSPTQIMVEK 283



 Score = 91.7 bits (226), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 77/260 (29%), Positives = 121/260 (46%), Gaps = 8/260 (3%)

Query: 163 AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 222
           A V  +SASE  A +V  S +VF  G N S C G  D N+    P+ +EAL G   K ++
Sbjct: 24  ACVFGISASE--AIYVTDSDEVFVFGLNYSNCLGTGD-NQSTLVPKKLEALCGKRIKSLS 80

Query: 223 AGLNFTGFLTIR-GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 281
            G      L+   G V+  G N + QLG+G T     P  +     V  VV++A G  + 
Sbjct: 81  YGSGPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPIQVCTNLLVKQVVEVACGSHHS 140

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 341
           +A+  +G ++++G  +   +G G   ++  PR +         VV ++ G    +A+  S
Sbjct: 141 MALAADGELFAWGYNNCGQVGSGSTANQPTPRKVTNCLHTK-KVVNIACGQTSSMAVLDS 199

Query: 342 GYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGW 401
           G VY WG    G LG G+  ++  P  +++L      Q+      T  L D G +Y +G 
Sbjct: 200 GEVYGWGYNGNGQLGLGNNGNQLTPVRVAALHGVCVNQIVCGYAHTLALTDEGLLYAWGA 259

Query: 402 MGFGSLGFPDRGVSDKVLRP 421
             +G LG    G  + +L P
Sbjct: 260 NTYGQLG---TGSKNNLLSP 276



 Score = 82.0 bits (201), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 62/228 (27%), Positives = 96/228 (42%), Gaps = 3/228 (1%)

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
           H     + G V+  G N     G+  TN+ I   ++   L      +V  G + +  L  
Sbjct: 86  HVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPIQVCTNLLVKQVVEVACGSHHSMALAA 145

Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
            G +   G N  GQ+G G T ++PTP+ +        VV IA G +  +AV  +G VY +
Sbjct: 146 DGELFAWGYNNCGQVGSGSTANQPTPRKVTNCLHTKKVVNIACGQTSSMAVLDSGEVYGW 205

Query: 294 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 353
           G   N  LG G   ++L P  +      G+ V ++  G  H +AL   G +Y WG    G
Sbjct: 206 GYNGNGQLGLGNNGNQLTPVRVAALH--GVCVNQIVCGYAHTLALTDEGLLYAWGANTYG 263

Query: 354 ALGHGDEIDKTLPEPLSSLKSH-LAVQVCARKRKTFVLVDTGSVYGFG 400
            LG G + +   P  +   K   + +  C     +      G VY +G
Sbjct: 264 QLGTGSKNNLLSPTQIMVEKERVIEIAACHSTHTSAAKTQGGHVYMWG 311



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 56/184 (30%), Positives = 86/184 (46%), Gaps = 6/184 (3%)

Query: 114 MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +++  G +H++ L ++  +F+ G + CG +G G    Q       N      VV ++  +
Sbjct: 131 VEVACGSHHSMALAADGELFAWGYNNCGQVGSGSTANQPTPRKVTNCLHTKKVVNIACGQ 190

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
             +  VL SG+V+  G N +   G    N     P  V AL GV   Q+  G   T  LT
Sbjct: 191 TSSMAVLDSGEVYGWGYNGNGQLG-LGNNGNQLTPVRVAALHGVCVNQIVCGYAHTLALT 249

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPS--YMLAVTGNGVV 290
             G ++  G+NT+GQLG G   +  +P  I  + E   V++IAA  S     A T  G V
Sbjct: 250 DEGLLYAWGANTYGQLGTGSKNNLLSPTQI--MVEKERVIEIAACHSTHTSAAKTQGGHV 307

Query: 291 YSFG 294
           Y +G
Sbjct: 308 YMWG 311


>gi|229442453|gb|AAI72909.1| guanine nucleotide exchange factor p532 [synthetic construct]
          Length = 2440

 Score =  109 bits (273), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 90/315 (28%), Positives = 144/315 (45%), Gaps = 25/315 (7%)

Query: 160 PSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTN------RPIFRPRLVEAL 213
           PS +    + A +     +   G V  CG  S    G  D+N      +  F P    ++
Sbjct: 400 PSFSDAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPH--RSI 457

Query: 214 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
           K V   + + G   T   T  G V + G   +G+LGHG++  +  PK I    +   VV 
Sbjct: 458 KKVSSSKGSDG--HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVC 515

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           ++AG  +  AVT +G +Y++G G    LGHG+ +     R I T  +   +V  VS G  
Sbjct: 516 VSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNS----RNIPTLVKDISNVGEVSCGSS 571

Query: 334 HVVALDSSGY-VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVD 392
           H +AL   G  V+++G G  G LGHGD      P+ + +L+     +VCA  + +  L  
Sbjct: 572 HTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTS 631

Query: 393 TGSVYGFG---WMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRG 449
           TG VY +G    +G GS            LRP++++ L A  +  +S G  H + ++   
Sbjct: 632 TGQVYAWGCGACLGCGS-------SEATALRPKLIEELAATRIVDVSIGDSHCLALSHDN 684

Query: 450 RLFGFGDNERAQLGH 464
            ++ +G+N   Q G 
Sbjct: 685 EVYAWGNNSMGQCGQ 699



 Score = 98.6 bits (244), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 93/267 (34%), Positives = 130/267 (48%), Gaps = 16/267 (5%)

Query: 122 HTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ-VSASENHAAFVL 179
           HTL   +   VFS G    G LGHG  +TQ      I  P    VV  VSA   H+A V 
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYP-KLIQGPLQGKVVVCVSAGYRHSAAVT 527

Query: 180 QSGQVFTCGDNSSFCCGHRDTN-RPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH-V 237
           + G+++T G+      GH D+N R I  P LV+ +  V   +V+ G + T  L+  G  V
Sbjct: 528 EDGELYTWGEGDFGRLGHGDSNSRNI--PTLVKDISNV--GEVSCGSSHTIALSKDGRTV 583

Query: 238 HTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 297
            + G   +G+LGHGDT     PK I  L+ +  + ++ AG    LA+T  G VY++G G+
Sbjct: 584 WSFGGGDNGKLGHGDTNRVYKPKVIEALQGM-FIRKVCAGSQSSLALTSTGQVYAWGCGA 642

Query: 298 NFCLGHG-EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 356
             CLG G  +   L+P+ I+        +V VS GD H +AL     VY WG    G  G
Sbjct: 643 --CLGCGSSEATALRPKLIEEL--AATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCG 698

Query: 357 HGDEIDK-TLPEPLSSLKSHLAVQVCA 382
            G+     T P+ +S L      Q+ A
Sbjct: 699 QGNSTGPITKPKKVSGLDGIAIQQISA 725



 Score = 59.7 bits (143), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 49/180 (27%), Positives = 82/180 (45%), Gaps = 13/180 (7%)

Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 349
           VY +GS S+  L  G Q   LQP+   +F         + AG      + + G V   GK
Sbjct: 374 VYVWGSNSSHQLVEGTQEKILQPKLAPSFS----DAQTIEAGQYCTFVISTDGSVRACGK 429

Query: 350 GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKR----KTFVLVDTGSVYGFGWMGFG 405
           G  G LG GD  +++  + L + + H +++  +  +     T      G V+ +G   +G
Sbjct: 430 GSYGRLGLGDSNNQSTLKKL-TFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYG 488

Query: 406 SLGFPDRGVSDKVLRPRILD-SLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 464
            LG    G S     P+++   L+   V  +S G  H+  VT+ G L+ +G+ +  +LGH
Sbjct: 489 KLG---HGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGH 545



 Score = 49.3 bits (116), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 29/100 (29%), Positives = 48/100 (48%), Gaps = 2/100 (2%)

Query: 125 LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQV 184
           L S   V++ G   C  LG G      +    I   +A  +V VS  ++H   +    +V
Sbjct: 629 LTSTGQVYAWGCGAC--LGCGSSEATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEV 686

Query: 185 FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           +  G+NS   CG  ++  PI +P+ V  L G+  +Q++AG
Sbjct: 687 YAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAG 726


>gi|148231237|ref|NP_001082607.1| serine/threonine-protein kinase Nek9 [Xenopus laevis]
 gi|49522774|gb|AAH74227.1| LOC398600 protein [Xenopus laevis]
          Length = 944

 Score =  109 bits (273), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 84/275 (30%), Positives = 125/275 (45%), Gaps = 21/275 (7%)

Query: 207 PRLVEALKG-VPCKQVTAGLNFTGFLTIRGHVHTC-----GSNTHGQLGHGDTLDRPTPK 260
           P+ ++  KG    +QV AG      +T+   ++T      GS  HGQLGHGD      PK
Sbjct: 341 PQKLDVFKGGWRARQVCAGDAHFAVVTVEKELYTWVNMQGGSKLHGQLGHGDRASYRQPK 400

Query: 261 SIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ--HDELQPRAIQTF 318
            +  L+   SV +++ G  +   +T  G +YSFGS    CLG  +    + L+P  +  F
Sbjct: 401 HVEKLQG-KSVQKVSCGSDFTACITDEGQLYSFGSDYYGCLGVNQSAGSEVLEPLLVDFF 459

Query: 319 RRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAV 378
             + +   +VS GD H++AL  S  VY+WG G  G LG   E D   P+ +   +    V
Sbjct: 460 LNEPVD--QVSCGDSHIMALTRSKSVYSWGCGEYGRLGLDSEDDVYSPQKVEVQRGLCIV 517

Query: 379 QVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRG---VSDKVLRP-------RILDSLR 428
            VC     +F+L  TG V   G      LG        ++ +  +         +   L 
Sbjct: 518 NVCCGSDGSFLLTLTGKVLACGLNEHNKLGLNQYTAGIINHEAFQEVPYTTSLTLAKQLS 577

Query: 429 AHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 463
            + +  IS G  HT  + +RGRL  FG N+  QLG
Sbjct: 578 FYKIRSISPGRTHTAAIDERGRLLTFGSNKCGQLG 612



 Score = 69.7 bits (169), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 47/173 (27%), Positives = 76/173 (43%), Gaps = 7/173 (4%)

Query: 312 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW-----GKGYCGALGHGDEIDKTLP 366
           P+ +  F+  G    +V AGD H   +     +YTW     G    G LGHGD      P
Sbjct: 341 PQKLDVFK-GGWRARQVCAGDAHFAVVTVEKELYTWVNMQGGSKLHGQLGHGDRASYRQP 399

Query: 367 EPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDS 426
           + +  L+     +V      T  + D G +Y FG   +G LG  ++    +VL P ++D 
Sbjct: 400 KHVEKLQGKSVQKVSCGSDFTACITDEGQLYSFGSDYYGCLGV-NQSAGSEVLEPLLVDF 458

Query: 427 LRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQ 479
                V Q+S G  H + +T    ++ +G  E  +LG D+      P ++ +Q
Sbjct: 459 FLNEPVDQVSCGDSHIMALTRSKSVYSWGCGEYGRLGLDSEDDVYSPQKVEVQ 511



 Score = 68.2 bits (165), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 74/304 (24%), Positives = 129/304 (42%), Gaps = 34/304 (11%)

Query: 115 QITTGRYHTLLISNS-SVFSCGSSLCGVLG-HGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +++ G   T  I++   ++S GS   G LG +    ++ +    ++F     V QVS  +
Sbjct: 412 KVSCGSDFTACITDEGQLYSFGSDYYGCLGVNQSAGSEVLEPLLVDFFLNEPVDQVSCGD 471

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHR-----DTNRPIFRPRLVEALKGVPCKQVTAGLNF 227
           +H   + +S  V++ G      CG       D+   ++ P+ VE  +G+    V  G + 
Sbjct: 472 SHIMALTRSKSVYSWG------CGEYGRLGLDSEDDVYSPQKVEVQRGLCIVNVCCGSDG 525

Query: 228 TGFLTIRGHVHTCGSNTHGQLG----------HGDTLDRPTPKSIAPLEEVG--SVVQIA 275
           +  LT+ G V  CG N H +LG          H    + P   S+   +++    +  I+
Sbjct: 526 SFLLTLTGKVLACGLNEHNKLGLNQYTAGIINHEAFQEVPYTTSLTLAKQLSFYKIRSIS 585

Query: 276 AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHV 335
            G ++  A+   G + +FGS     LG G+    L    +      G  V+RVS GDE  
Sbjct: 586 PGRTHTAAIDERGRLLTFGSNKCGQLGVGDYRKHLGINLLGG-PLGGKQVIRVSCGDEFT 644

Query: 336 VALDSSGYVYTWGKGYCGALG-------HGDEIDKTLPEPLSSLKSHLAVQVCARKRKTF 388
            A  +  +++ WG G  G L         G +I  + P P+     H+    C R   T 
Sbjct: 645 TAATADNHIFAWGNGGNGRLAMTPNERPQGSDICTSWPRPIFGSLHHVTDLSC-RGWHTI 703

Query: 389 VLVD 392
           ++V+
Sbjct: 704 LIVE 707



 Score = 63.2 bits (152), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 82/333 (24%), Positives = 136/333 (40%), Gaps = 24/333 (7%)

Query: 135 GSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFC 194
           GS L G LGHG   +       +       V +VS   +  A +   GQ+++ G +   C
Sbjct: 381 GSKLHGQLGHGDRASY-RQPKHVEKLQGKSVQKVSCGSDFTACITDEGQLYSFGSDYYGC 439

Query: 195 CG-HRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDT 253
            G ++     +  P LV+     P  QV+ G +    LT    V++ G   +G+LG    
Sbjct: 440 LGVNQSAGSEVLEPLLVDFFLNEPVDQVSCGDSHIMALTRSKSVYSWGCGEYGRLGLDSE 499

Query: 254 LDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGE------QH 307
            D  +P+ +  ++    +V +  G      +T  G V + G   +  LG  +       H
Sbjct: 500 DDVYSPQKVE-VQRGLCIVNVCCGSDGSFLLTLTGKVLACGLNEHNKLGLNQYTAGIINH 558

Query: 308 DELQPRAIQT----FRRKGIHVVR-VSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEID 362
           +  Q     T     ++   + +R +S G  H  A+D  G + T+G   CG LG GD   
Sbjct: 559 EAFQEVPYTTSLTLAKQLSFYKIRSISPGRTHTAAIDERGRLLTFGSNKCGQLGVGD-YR 617

Query: 363 KTLPEPL--SSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGF-PD---RGVSD 416
           K L   L    L     ++V      T        ++ +G  G G L   P+   +G   
Sbjct: 618 KHLGINLLGGPLGGKQVIRVSCGDEFTTAATADNHIFAWGNGGNGRLAMTPNERPQGSDI 677

Query: 417 KVLRPR-ILDSLRAHHVSQISTGLYHTVVVTDR 448
               PR I  SL  HHV+ +S   +HT+++ ++
Sbjct: 678 CTSWPRPIFGSL--HHVTDLSCRGWHTILIVEK 708


>gi|327261091|ref|XP_003215365.1| PREDICTED: RCC1 and BTB domain-containing protein 1-like [Anolis
           carolinensis]
          Length = 530

 Score =  109 bits (273), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 77/256 (30%), Positives = 126/256 (49%), Gaps = 13/256 (5%)

Query: 230 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGSVVQIAAGPSYMLAVTGN 287
           ++T    V   G N    LG GD      PK +  L  + + S+    +GP  +L+ T +
Sbjct: 35  YITHNDEVFVFGLNCSNCLGTGDNQSTIVPKKLESLSGKRIRSL-SYGSGPHVVLS-TED 92

Query: 288 GVVYSFGSGSNFCLGHGEQHDELQPRAIQT--FRRKGIHVVRVSAGDEHVVALDSSGYVY 345
           G VY++G      LG+G  +  + P  + T    +K   V+ V+ G  H +AL S G VY
Sbjct: 93  GEVYAWGHNGYSQLGNGTTNQGVTPIQVCTNLLIKK---VIEVACGSHHSLALSSDGDVY 149

Query: 346 TWGKGYCGALGHGDEIDKTLPEPLSS-LKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGF 404
            WG   CG +G G   ++  P  +S+ L++ + V +   +  +  +VD G VYG+G+ G 
Sbjct: 150 AWGYNNCGQVGSGSTANQPTPRKVSNCLQTKIVVSIACGQTSSVAIVDNGEVYGWGYNGN 209

Query: 405 GSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 464
           G LG  + G     L P  + +L+   + QI+ G  HT+ +TD G ++ +G N   QLG 
Sbjct: 210 GQLGLGNNG---NQLTPCRVAALQGVCIMQIACGYAHTLALTDEGLMYSWGANTYGQLGT 266

Query: 465 DTLRGCLEPTEIFIQE 480
                 L P +I +++
Sbjct: 267 GNKSNQLSPGQILMEK 282



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 69/239 (28%), Positives = 117/239 (48%), Gaps = 3/239 (1%)

Query: 171 SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
           S N A ++  + +VF  G N S C G  D N+    P+ +E+L G   + ++ G      
Sbjct: 29  SANEAIYITHNDEVFVFGLNCSNCLGTGD-NQSTIVPKKLESLSGKRIRSLSYGSGPHVV 87

Query: 231 LTIR-GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 289
           L+   G V+  G N + QLG+G T    TP  +     +  V+++A G  + LA++ +G 
Sbjct: 88  LSTEDGEVYAWGHNGYSQLGNGTTNQGVTPIQVCTNLLIKKVIEVACGSHHSLALSSDGD 147

Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 349
           VY++G  +   +G G   ++  PR +    +  I VV ++ G    VA+  +G VY WG 
Sbjct: 148 VYAWGYNNCGQVGSGSTANQPTPRKVSNCLQTKI-VVSIACGQTSSVAIVDNGEVYGWGY 206

Query: 350 GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLG 408
              G LG G+  ++  P  +++L+    +Q+      T  L D G +Y +G   +G LG
Sbjct: 207 NGNGQLGLGNNGNQLTPCRVAALQGVCIMQIACGYAHTLALTDEGLMYSWGANTYGQLG 265



 Score = 94.7 bits (234), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 73/286 (25%), Positives = 129/286 (45%), Gaps = 5/286 (1%)

Query: 117 TTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS-ASENHA 175
           T+      +  N  VF  G +    LG G   +  V   ++   S   +  +S  S  H 
Sbjct: 28  TSANEAIYITHNDEVFVFGLNCSNCLGTGDNQSTIVP-KKLESLSGKRIRSLSYGSGPHV 86

Query: 176 AFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRG 235
               + G+V+  G N     G+  TN+ +   ++   L      +V  G + +  L+  G
Sbjct: 87  VLSTEDGEVYAWGHNGYSQLGNGTTNQGVTPIQVCTNLLIKKVIEVACGSHHSLALSSDG 146

Query: 236 HVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 295
            V+  G N  GQ+G G T ++PTP+ ++   +   VV IA G +  +A+  NG VY +G 
Sbjct: 147 DVYAWGYNNCGQVGSGSTANQPTPRKVSNCLQTKIVVSIACGQTSSVAIVDNGEVYGWGY 206

Query: 296 GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGAL 355
             N  LG G   ++L P  +   +  G+ +++++ G  H +AL   G +Y+WG    G L
Sbjct: 207 NGNGQLGLGNNGNQLTPCRVAALQ--GVCIMQIACGYAHTLALTDEGLMYSWGANTYGQL 264

Query: 356 GHGDEIDKTLP-EPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 400
           G G++ ++  P + L   +  + +  C     +     +G VY +G
Sbjct: 265 GTGNKSNQLSPGQILMEKERVVEIAACHSAHTSAAKTQSGLVYMWG 310



 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 56/184 (30%), Positives = 93/184 (50%), Gaps = 6/184 (3%)

Query: 114 MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +++  G +H+L L S+  V++ G + CG +G G    Q       N      VV ++  +
Sbjct: 130 IEVACGSHHSLALSSDGDVYAWGYNNCGQVGSGSTANQPTPRKVSNCLQTKIVVSIACGQ 189

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
             +  ++ +G+V+  G N +   G  +    +  P  V AL+GV   Q+  G   T  LT
Sbjct: 190 TSSVAIVDNGEVYGWGYNGNGQLGLGNNGNQL-TPCRVAALQGVCIMQIACGYAHTLALT 248

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPS--YMLAVTGNGVV 290
             G +++ G+NT+GQLG G+  ++ +P  I  L E   VV+IAA  S     A T +G+V
Sbjct: 249 DEGLMYSWGANTYGQLGTGNKSNQLSPGQI--LMEKERVVEIAACHSAHTSAAKTQSGLV 306

Query: 291 YSFG 294
           Y +G
Sbjct: 307 YMWG 310


>gi|224008819|ref|XP_002293368.1| guanyl nucleotide exchange factor [Thalassiosira pseudonana
           CCMP1335]
 gi|220970768|gb|EED89104.1| guanyl nucleotide exchange factor [Thalassiosira pseudonana
           CCMP1335]
          Length = 400

 Score =  109 bits (273), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 85/262 (32%), Positives = 130/262 (49%), Gaps = 19/262 (7%)

Query: 237 VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG---SVVQIAAGPSYM-LAVTGNGVVYS 292
           + + G    GQ GHGD  D   PK +  L ++G    +VQ+AAG   + L +  +G V S
Sbjct: 4   IASWGVAKRGQCGHGDREDVSEPKLL--LGKIGWGVRIVQVAAGGGQLDLMLKKSGRVLS 61

Query: 293 FGSGSNFCLGHG-----EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 347
           FG+     LGHG     +  D L+PR I   + +   V+ VSAG+ H   + + G VYTW
Sbjct: 62  FGTAQYGALGHGYDAGKQLSDCLRPRYIDALKNE--KVICVSAGELHSGCVTADGDVYTW 119

Query: 348 GKGYCGALGHGDEIDKTLPEP--LSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFG 405
           G+G+CG LG GD     LPE   L  L+      +    R T V+ + G V+ +G   +G
Sbjct: 120 GEGFCGQLGLGDRRPHLLPEQVTLGGLEDECVSNMSCGCRHTLVVTEEGEVFSWGLGRYG 179

Query: 406 SLGFPDRGVSDKVLR--PRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 463
            L   +  + D   +  P+++D+L A     +S G  H++V+ + G L+ FG      LG
Sbjct: 180 VLDALNLTLDDPSDQCFPKLVDALGAFRAVGVSAGHRHSMVLDEHGGLYTFGSGASGALG 239

Query: 464 HDTLRGCLEPTEIFIQEMEEDT 485
           H  L G   P ++   + EE+ 
Sbjct: 240 HGDLVGQEFPVKVM--QFEENN 259



 Score = 93.2 bits (230), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 91/325 (28%), Positives = 149/325 (45%), Gaps = 26/325 (8%)

Query: 106 IVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHG----PETTQCVSFTRINFPS 161
           IV+ +AG  Q+       +L  +  V S G++  G LGHG     + + C+    I+   
Sbjct: 39  IVQVAAGGGQLDL-----MLKKSGRVLSFGTAQYGALGHGYDAGKQLSDCLRPRYIDALK 93

Query: 162 AAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVE--ALKGVPCK 219
              V+ VSA E H+  V   G V+T G+      G  D  RP   P  V    L+     
Sbjct: 94  NEKVICVSAGELHSGCVTADGDVYTWGEGFCGQLGLGD-RRPHLLPEQVTLGGLEDECVS 152

Query: 220 QVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGD-TLDRPTPKSIAPL-EEVGS--VVQIA 275
            ++ G   T  +T  G V + G   +G L   + TLD P+ +    L + +G+   V ++
Sbjct: 153 NMSCGCRHTLVVTEEGEVFSWGLGRYGVLDALNLTLDDPSDQCFPKLVDALGAFRAVGVS 212

Query: 276 AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHV 335
           AG  + + +  +G +Y+FGSG++  LGHG+   +  P  +  F    + + ++SAG +  
Sbjct: 213 AGHRHSMVLDEHGGLYTFGSGASGALGHGDLVGQEFPVKVMQFEENNVRIHQMSAGVDMS 272

Query: 336 VALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHL-AVQVCARKRKTFVLVDTG 394
           +A+ ++G VY WGK   G +G G+  D  LP  +    ++   V V      + ++   G
Sbjct: 273 MAVSTTGDVYAWGKAKEGRIGLGNNNDICLPRKVDVGDANFKGVDVECGYVHSLIIGLDG 332

Query: 395 SVYGFGWMGF---------GSLGFP 410
           SVY  G +G          G  GFP
Sbjct: 333 SVYQCGGVGVDGKDDGQNTGGDGFP 357


>gi|326432295|gb|EGD77865.1| ITCH protein [Salpingoeca sp. ATCC 50818]
          Length = 1207

 Score =  109 bits (273), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 104/346 (30%), Positives = 156/346 (45%), Gaps = 22/346 (6%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           + TG YH+L I+ S +V++ G +    LG   +  +    T +   +A   V  +   + 
Sbjct: 40  VATGYYHSLAITRSGTVYTTGKNDRRQLGRSGDEHKWARVTPLETITA---VAGAVGLDF 96

Query: 175 AAFVLQSGQVFTCG--DNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
           +  V  +G+V+T G  +      G          PR V+ L       V  G      LT
Sbjct: 97  SVVVDSTGKVYTWGGGERGQLGLGREAMETGSRVPRPVKGLGNAFVISVACGTRHCLALT 156

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
             G V + G    GQLG G  + R +P+ IA L   G VV +AAG +Y LAVTG   VY+
Sbjct: 157 RDGRVFSWGEGADGQLGDGQFVSRHSPEVIADLRGKG-VVSVAAGSTYSLAVTGADQVYA 215

Query: 293 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 352
           FGS S   LG G+     +P  ++     G  V  V+AGD H +A   +G++Y WG    
Sbjct: 216 FGSNSKGQLGVGDTTARFRPTLVRFL--DGKQVCHVTAGDFHTLARTRTGHLYAWGSNQW 273

Query: 353 GALGHGDEIDK-TLPEPLSS-LKSHLAVQVCARKRKTFVLVDTGSVYG--------FGWM 402
           G LG G E D    P  ++  L+    ++V A +R T  L+ T +  G        FG  
Sbjct: 274 GQLGLGSEADSVAAPTEITHILEIGRVLEVSAGRRHTVALIRTVTETGAQATVAVAFGAN 333

Query: 403 GFGSLGF-PDRGVSDK--VLRPRILDSLRAHHVSQISTGLYHTVVV 445
             G LG  PD   S +  +  P  L  + + H  ++  G  HT+++
Sbjct: 334 NTGQLGLDPDHPASKRTQLFHPVRLKRISSMHPIKLIAGGNHTIMI 379



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 76/248 (30%), Positives = 113/248 (45%), Gaps = 8/248 (3%)

Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 290
           +T  G V+T G N   QLG     D      + PLE + +V   A G  + + V   G V
Sbjct: 50  ITRSGTVYTTGKNDRRQLGRSG--DEHKWARVTPLETITAVAG-AVGLDFSVVVDSTGKV 106

Query: 291 YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKG-IHVVRVSAGDEHVVALDSSGYVYTWGK 349
           Y++G G    LG G +  E   R  +  +  G   V+ V+ G  H +AL   G V++WG+
Sbjct: 107 YTWGGGERGQLGLGREAMETGSRVPRPVKGLGNAFVISVACGTRHCLALTRDGRVFSWGE 166

Query: 350 GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGF 409
           G  G LG G  + +  PE ++ L+    V V A    +  +     VY FG    G LG 
Sbjct: 167 GADGQLGDGQFVSRHSPEVIADLRGKGVVSVAAGSTYSLAVTGADQVYAFGSNSKGQLGV 226

Query: 410 PDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG 469
            D   +    RP ++  L    V  ++ G +HT+  T  G L+ +G N+  QLG  +   
Sbjct: 227 GD---TTARFRPTLVRFLDGKQVCHVTAGDFHTLARTRTGHLYAWGSNQWGQLGLGSEAD 283

Query: 470 CL-EPTEI 476
            +  PTEI
Sbjct: 284 SVAAPTEI 291



 Score = 82.0 bits (201), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 73/244 (29%), Positives = 110/244 (45%), Gaps = 16/244 (6%)

Query: 237 VHTCGSNTHGQLGHGDTLDR-PTPKSIAP-LEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 294
           V   G+   GQLG GD      T  ++ P LE+   +  +A G  + LA+T +G VY+ G
Sbjct: 3   VAVWGATGAGQLGIGDADGTGKTRVTLVPSLEQ--ELAFVATGYYHSLAITRSGTVYTTG 60

Query: 295 SGSNFCLGH-GEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 353
                 LG  G++H   +   ++T     I  V  + G +  V +DS+G VYTWG G  G
Sbjct: 61  KNDRRQLGRSGDEHKWARVTPLET-----ITAVAGAVGLDFSVVVDSTGKVYTWGGGERG 115

Query: 354 ALGHGDEIDKT---LPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFP 410
            LG G E  +T   +P P+  L +   + V    R    L   G V+ +G    G LG  
Sbjct: 116 QLGLGREAMETGSRVPRPVKGLGNAFVISVACGTRHCLALTRDGRVFSWGEGADGQLG-- 173

Query: 411 DRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGC 470
             G       P ++  LR   V  ++ G  +++ VT   +++ FG N + QLG       
Sbjct: 174 -DGQFVSRHSPEVIADLRGKGVVSVAAGSTYSLAVTGADQVYAFGSNSKGQLGVGDTTAR 232

Query: 471 LEPT 474
             PT
Sbjct: 233 FRPT 236


>gi|339010099|ref|ZP_08642670.1| copper amine oxidase domain protein [Brevibacillus laterosporus LMG
           15441]
 gi|338773369|gb|EGP32901.1| copper amine oxidase domain protein [Brevibacillus laterosporus LMG
           15441]
          Length = 392

 Score =  109 bits (273), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 96/349 (27%), Positives = 156/349 (44%), Gaps = 15/349 (4%)

Query: 129 SSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCG 188
           S ++  GS   GVLG      +  S   ++    + V+ V    +H   + + G V+T G
Sbjct: 51  SVIYGTGSDANGVLGSSSVKGKTTSPVPVD--DLSDVLMVDTGTSHTVALQKDGTVWTWG 108

Query: 189 DNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQL 248
            ++    G+         P  V+ L  V  KQV AG NFT  L   G V   G N  GQL
Sbjct: 109 WSAYGELGNEKAKSTEKTPHHVKWLSDV--KQVRAGENFTLALKEDGTVWAFGKNRSGQL 166

Query: 249 GHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHD 308
           G G T  R  P  ++ L +   +V I AG  + LA++ +G V+++G+ S   LG+G +  
Sbjct: 167 GDGTTETRVKPVQVSGLTD---IVAIDAGEEFSLALSEDGTVWAWGNNSVGQLGNGTREK 223

Query: 309 ELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEP 368
            LQP  +         V+ +S G++   A+ S+G VY WG    G LG G    +  P  
Sbjct: 224 ALQPVQVSEL----TDVIAISTGEKQGYAVTSNGDVYGWGYN-QGKLGDGTNKSRNSPVL 278

Query: 369 LSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLR 428
           +  +   +AV   + K+ T  L + G+V+ +G    G LG+              L+S  
Sbjct: 279 IDGIYDVIAVD--SGKQHTLALKEDGTVWAWGTNTHGQLGYGTPVNYSMTPNQVFLESTE 336

Query: 429 A-HHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 476
             + +  I  G +H+  +   G ++ +G N   +LG    +  + P +I
Sbjct: 337 PLNQIVAIDAGGFHSHAIKKDGTVWSWGFNSNGELGLGHSKKQMYPAKI 385



 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 61/219 (27%), Positives = 97/219 (44%), Gaps = 16/219 (7%)

Query: 104 SDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAA 163
           +DIV   AG        +   L  + +V++ G++  G LG+G   T+  +   +      
Sbjct: 184 TDIVAIDAGE------EFSLALSEDGTVWAWGNNSVGQLGNG---TREKALQPVQVSELT 234

Query: 164 HVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTA 223
            V+ +S  E     V  +G V+  G N         TN+    P L++ +  V    V +
Sbjct: 235 DVIAISTGEKQGYAVTSNGDVYGWGYNQGKLG--DGTNKSRNSPVLIDGIYDVIA--VDS 290

Query: 224 GLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRP-TPKSI--APLEEVGSVVQIAAGPSY 280
           G   T  L   G V   G+NTHGQLG+G  ++   TP  +     E +  +V I AG  +
Sbjct: 291 GKQHTLALKEDGTVWAWGTNTHGQLGYGTPVNYSMTPNQVFLESTEPLNQIVAIDAGGFH 350

Query: 281 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFR 319
             A+  +G V+S+G  SN  LG G    ++ P  I+T  
Sbjct: 351 SHAIKKDGTVWSWGFNSNGELGLGHSKKQMYPAKIETIN 389


>gi|330798916|ref|XP_003287495.1| hypothetical protein DICPUDRAFT_151599 [Dictyostelium purpureum]
 gi|325082514|gb|EGC35994.1| hypothetical protein DICPUDRAFT_151599 [Dictyostelium purpureum]
          Length = 1935

 Score =  109 bits (273), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 79/275 (28%), Positives = 134/275 (48%), Gaps = 21/275 (7%)

Query: 220  QVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDR--PTPKSIAPLEEVGSVVQIAAG 277
            +V+ G +    +T  G ++T GSN  GQLGHG  +++    PK +        +  +  G
Sbjct: 1126 KVSCGWDHIAVITDDGELYTWGSNQSGQLGHGLEVNKTLSLPKRVDFFRGKSPIFMVECG 1185

Query: 278  PSYMLAVTGNGVVYSFGSGSNFCLGHGEQH-DELQPRAIQTFRRKGIHVVRVSAGDEHVV 336
              + +AV  N  VYS+GS     LGHG +  ++ +P+ I+    + I  +  +AG  H +
Sbjct: 1186 GEHTIAVDSNYFVYSWGSDKFGQLGHGTKAVNQSRPKVIEELTGQKIQAI--AAGFAHNI 1243

Query: 337  ALDSSGYVYTWGKGYCGALGHGDEIDKTLPEP------LSSLKSHLA---VQVCARKRKT 387
             L  SG ++++G G  G LG G    K +P        +  L+ H      Q+      +
Sbjct: 1244 VLKKSGELFSFGYGDFGQLGTGSFHSKNIPTRIEINAIMGGLQHHDGGKITQIACGFGHS 1303

Query: 388  FVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTD 447
             +  + G VY +G    G LG     V + + +PR++++LR   V++IS G +HTV  TD
Sbjct: 1304 VICSENGEVYSWGLGKQGQLG---HKVFENISKPRLIETLRG--VTKISCGHFHTVATTD 1358

Query: 448  RGRLFGFGDNERAQLGHDTLRGCLEP--TEIFIQE 480
               ++ +G  E  +LGH + +    P   + FIQ+
Sbjct: 1359 LKNVYSWGSGEHMKLGHSSDKDESVPKVVDFFIQK 1393



 Score =  109 bits (273), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 64/224 (28%), Positives = 118/224 (52%), Gaps = 10/224 (4%)

Query: 262  IAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHG-EQHDELQ-PRAIQTFR 319
            +APL+     ++++ G  ++  +T +G +Y++GS  +  LGHG E +  L  P+ +  FR
Sbjct: 1115 MAPLKNEKKAIKVSCGWDHIAVITDDGELYTWGSNQSGQLGHGLEVNKTLSLPKRVDFFR 1174

Query: 320  RKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE-IDKTLPEPLSSLKSHLAV 378
             K   +  V  G EH +A+DS+ +VY+WG    G LGHG + ++++ P+ +  L      
Sbjct: 1175 GKS-PIFMVECGGEHTIAVDSNYFVYSWGSDKFGQLGHGTKAVNQSRPKVIEELTGQKIQ 1233

Query: 379  QVCARKRKTFVLVDTGSVYGFGWMGFGSLG---FPDRGVSDKVLRPRILDSLRAH---HV 432
             + A      VL  +G ++ FG+  FG LG   F  + +  ++    I+  L+ H    +
Sbjct: 1234 AIAAGFAHNIVLKKSGELFSFGYGDFGQLGTGSFHSKNIPTRIEINAIMGGLQHHDGGKI 1293

Query: 433  SQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 476
            +QI+ G  H+V+ ++ G ++ +G  ++ QLGH       +P  I
Sbjct: 1294 TQIACGFGHSVICSENGEVYSWGLGKQGQLGHKVFENISKPRLI 1337



 Score = 99.0 bits (245), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 97/402 (24%), Positives = 169/402 (42%), Gaps = 40/402 (9%)

Query: 114  MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSF-TRIN-FPSAAHVVQVSA 170
            ++++ G  H  +I++   +++ GS+  G LGHG E  + +S   R++ F   + +  V  
Sbjct: 1125 IKVSCGWDHIAVITDDGELYTWGSNQSGQLGHGLEVNKTLSLPKRVDFFRGKSPIFMVEC 1184

Query: 171  SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
               H   V  +  V++ G +     GH        RP+++E L G   + + AG      
Sbjct: 1185 GGEHTIAVDSNYFVYSWGSDKFGQLGHGTKAVNQSRPKVIEELTGQKIQAIAAGFAHNIV 1244

Query: 231  LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA--------PLEEVGSVVQIAAGPSYML 282
            L   G + + G    GQLG G    +  P  I            + G + QIA G  + +
Sbjct: 1245 LKKSGELFSFGYGDFGQLGTGSFHSKNIPTRIEINAIMGGLQHHDGGKITQIACGFGHSV 1304

Query: 283  AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
              + NG VYS+G G    LGH    +  +PR I+T R     V ++S G  H VA     
Sbjct: 1305 ICSENGEVYSWGLGKQGQLGHKVFENISKPRLIETLR----GVTKISCGHFHTVATTDLK 1360

Query: 343  YVYTWGKGYCGALGHGDEIDKTLPEPLS-SLKSHLAVQVCARKRK-TFVLVD-------- 392
             VY+WG G    LGH  + D+++P+ +   ++ +++  VC +    T    D        
Sbjct: 1361 NVYSWGSGEHMKLGHSSDKDESVPKVVDFFIQKNVSKVVCGQNHTMTITFPDDLNNSNQD 1420

Query: 393  -----------TGSVYGFGWMGFGSLGFPDRGVS---DKVLRPRILDSLRAHHVSQISTG 438
                       +  +Y +G    G LG      S   DK + P  +  + + ++  IS G
Sbjct: 1421 DEDEENMNGKSSSPIYAWGSAEHGKLGLGGDLKSPFFDKPI-PTAIKGVNSLNLIDISCG 1479

Query: 439  LYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQE 480
               + ++T    ++ +G     Q+G+        PT I + +
Sbjct: 1480 SDFSAMITSNNAIYVWGCGRFGQIGNGKNDDVWVPTRISLND 1521


>gi|449274807|gb|EMC83885.1| Serine/threonine-protein kinase Nek9, partial [Columba livia]
          Length = 878

 Score =  109 bits (273), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 85/275 (30%), Positives = 126/275 (45%), Gaps = 21/275 (7%)

Query: 207 PRLVEALK-GVPCKQVTAGLNFTGFLTIRGHVHTC-----GSNTHGQLGHGDTLDRPTPK 260
           P+ ++A+K G   +QV AG      +T+   ++T      G+  HGQLGHGD      PK
Sbjct: 263 PQKLDAIKSGCSARQVCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDRASYRQPK 322

Query: 261 SIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH--DELQPRAIQTF 318
            +  L+   ++ Q++ G  + + +T  G VY+FGS    C+G  + +  + L+P  +  F
Sbjct: 323 HVEKLQG-KAIHQVSCGDDFTVCITDEGQVYAFGSDYYGCIGVDKAYGSEVLEPLQLDFF 381

Query: 319 RRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAV 378
               +   +VS GD HV  L  +  VYTWG G  G LG   E D   P+ +   K+   V
Sbjct: 382 LTNPVE--QVSCGDNHVAVLTRNREVYTWGCGEYGRLGLDSEEDHYTPQKVDVPKTLNIV 439

Query: 379 QVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD--RGVSDK--------VLRPRILDSLR 428
            V      TF+L  TG V   G   F  LG      G+ +              +   L 
Sbjct: 440 SVHCGCDGTFLLTQTGKVLACGLNEFNKLGLNQCTSGIINHDTYCEVPYATSLTLAKQLS 499

Query: 429 AHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 463
            + +  IS G  HT  + +RGRL  FG N+  QLG
Sbjct: 500 FYKIRTISPGKTHTASIDERGRLLTFGSNKCGQLG 534



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 77/307 (25%), Positives = 131/307 (42%), Gaps = 40/307 (13%)

Query: 115 QITTGRYHTLLISNS-SVFSCGSSLCGVLG----HGPETTQCVSFTRINFPSAAHVVQVS 169
           Q++ G   T+ I++   V++ GS   G +G    +G E  + +   +++F     V QVS
Sbjct: 334 QVSCGDDFTVCITDEGQVYAFGSDYYGCIGVDKAYGSEVLEPL---QLDFFLTNPVEQVS 390

Query: 170 ASENHAAFVLQSGQVFTCGDNSSFCCGHR-----DTNRPIFRPRLVEALKGVPCKQVTAG 224
             +NH A + ++ +V+T G      CG       D+    + P+ V+  K +    V  G
Sbjct: 391 CGDNHVAVLTRNREVYTWG------CGEYGRLGLDSEEDHYTPQKVDVPKTLNIVSVHCG 444

Query: 225 LNFTGFLTIRGHVHTCGSNTHGQLG----------HGDTLDRPTPKSIAPLEEVG--SVV 272
            + T  LT  G V  CG N   +LG          H    + P   S+   +++    + 
Sbjct: 445 CDGTFLLTQTGKVLACGLNEFNKLGLNQCTSGIINHDTYCEVPYATSLTLAKQLSFYKIR 504

Query: 273 QIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGD 332
            I+ G ++  ++   G + +FGS     LG G+    L    +      G  V+RVS GD
Sbjct: 505 TISPGKTHTASIDERGRLLTFGSNKCGQLGVGDYKKHLGINLLGG-PLGGKQVIRVSCGD 563

Query: 333 EHVVALDSSGYVYTWGKGYCGAL-------GHGDEIDKTLPEPLSSLKSHLAVQVCARKR 385
           E  +A     +++ WG G  G L        HG +I  + P P+     H+    C R  
Sbjct: 564 EFTIAATDDNHIFAWGNGGNGRLAMTSTERAHGSDICTSWPRPIFGSLHHVPDLSC-RGW 622

Query: 386 KTFVLVD 392
            T ++V+
Sbjct: 623 HTIIVVE 629



 Score = 69.7 bits (169), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 92/384 (23%), Positives = 149/384 (38%), Gaps = 46/384 (11%)

Query: 98  QSVEHSSDIVETSAGNMQITTGRYHTLLIS-NSSVFSC-----GSSLCGVLGHGPETTQC 151
           +S     D +++     Q+  G  H  +++    +++      G+ L G LGHG      
Sbjct: 260 KSTPQKLDAIKSGCSARQVCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHG------ 313

Query: 152 VSFTRINFPSAAHVV--------QVSASENHAAFVLQSGQVFTCGDNSSFCCG-HRDTNR 202
               R ++    HV         QVS  ++    +   GQV+  G +   C G  +    
Sbjct: 314 ---DRASYRQPKHVEKLQGKAIHQVSCGDDFTVCITDEGQVYAFGSDYYGCIGVDKAYGS 370

Query: 203 PIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSI 262
            +  P  ++     P +QV+ G N    LT    V+T G   +G+LG     D  TP+ +
Sbjct: 371 EVLEPLQLDFFLTNPVEQVSCGDNHVAVLTRNREVYTWGCGEYGRLGLDSEEDHYTPQKV 430

Query: 263 APLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS------GSNFCLGHGEQHDEL--QPRA 314
             + +  ++V +  G      +T  G V + G       G N C      HD     P A
Sbjct: 431 D-VPKTLNIVSVHCGCDGTFLLTQTGKVLACGLNEFNKLGLNQCTSGIINHDTYCEVPYA 489

Query: 315 IQTFRRKGIHVVRV---SAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPL-- 369
                 K +   ++   S G  H  ++D  G + T+G   CG LG GD   K L   L  
Sbjct: 490 TSLTLAKQLSFYKIRTISPGKTHTASIDERGRLLTFGSNKCGQLGVGD-YKKHLGINLLG 548

Query: 370 SSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFP--DRGVSDKVLR--PR-IL 424
             L     ++V      T    D   ++ +G  G G L     +R     +    PR I 
Sbjct: 549 GPLGGKQVIRVSCGDEFTIAATDDNHIFAWGNGGNGRLAMTSTERAHGSDICTSWPRPIF 608

Query: 425 DSLRAHHVSQISTGLYHTVVVTDR 448
            SL  HHV  +S   +HT++V ++
Sbjct: 609 GSL--HHVPDLSCRGWHTIIVVEK 630



 Score = 69.3 bits (168), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 47/164 (28%), Positives = 71/164 (43%), Gaps = 6/164 (3%)

Query: 320 RKGIHVVRVSAGDEHVVALDSSGYVYTW-----GKGYCGALGHGDEIDKTLPEPLSSLKS 374
           + G    +V AG+ H   +     +YTW     G    G LGHGD      P+ +  L+ 
Sbjct: 270 KSGCSARQVCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDRASYRQPKHVEKLQG 329

Query: 375 HLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQ 434
               QV      T  + D G VY FG   +G +G  D+    +VL P  LD    + V Q
Sbjct: 330 KAIHQVSCGDDFTVCITDEGQVYAFGSDYYGCIGV-DKAYGSEVLEPLQLDFFLTNPVEQ 388

Query: 435 ISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFI 478
           +S G  H  V+T    ++ +G  E  +LG D+      P ++ +
Sbjct: 389 VSCGDNHVAVLTRNREVYTWGCGEYGRLGLDSEEDHYTPQKVDV 432


>gi|326920825|ref|XP_003206668.1| PREDICTED: serine/threonine-protein kinase Nek9-like [Meleagris
           gallopavo]
          Length = 905

 Score =  109 bits (272), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 84/275 (30%), Positives = 126/275 (45%), Gaps = 21/275 (7%)

Query: 207 PRLVEALK-GVPCKQVTAGLNFTGFLTIRGHVHTC-----GSNTHGQLGHGDTLDRPTPK 260
           P+ ++A+K G   +QV AG      +T+   ++T      G+  HGQLGHGD      PK
Sbjct: 290 PQKLDAIKSGCSARQVCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDRASYRQPK 349

Query: 261 SIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH--DELQPRAIQTF 318
            +  L+   ++ Q++ G  + + +T  G +Y+FGS    C+G  + +  + L+P  +  F
Sbjct: 350 HVEKLQG-KAIRQVSCGDDFTVCITDEGQLYAFGSDYYGCIGIDKAYGSEVLEPLQLDFF 408

Query: 319 RRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAV 378
               +   +VS GD HV  L  +  VYTWG G  G LG   E D   P+ +   K+   V
Sbjct: 409 LTNPVE--QVSCGDNHVAVLTRNREVYTWGCGEYGRLGLDSEEDHCTPQKVDVPKTLNIV 466

Query: 379 QVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD--RGVSDK--------VLRPRILDSLR 428
            V      TF+L  TG V   G   F  LG      G+ +              +   L 
Sbjct: 467 SVHCGCDGTFLLTQTGKVLACGLNEFNKLGLNQCTSGIINHDTYCEVPYATSLTLAKQLS 526

Query: 429 AHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 463
            + +  IS G  HT  + +RGRL  FG N+  QLG
Sbjct: 527 FYKIRTISPGKTHTASIDERGRLLTFGSNKCGQLG 561



 Score = 68.9 bits (167), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 76/307 (24%), Positives = 130/307 (42%), Gaps = 40/307 (13%)

Query: 115 QITTGRYHTLLISNS-SVFSCGSSLCGVLG----HGPETTQCVSFTRINFPSAAHVVQVS 169
           Q++ G   T+ I++   +++ GS   G +G    +G E  + +   +++F     V QVS
Sbjct: 361 QVSCGDDFTVCITDEGQLYAFGSDYYGCIGIDKAYGSEVLEPL---QLDFFLTNPVEQVS 417

Query: 170 ASENHAAFVLQSGQVFTCGDNSSFCCGHR-----DTNRPIFRPRLVEALKGVPCKQVTAG 224
             +NH A + ++ +V+T G      CG       D+      P+ V+  K +    V  G
Sbjct: 418 CGDNHVAVLTRNREVYTWG------CGEYGRLGLDSEEDHCTPQKVDVPKTLNIVSVHCG 471

Query: 225 LNFTGFLTIRGHVHTCGSNTHGQLG----------HGDTLDRPTPKSIAPLEEVG--SVV 272
            + T  LT  G V  CG N   +LG          H    + P   S+   +++    + 
Sbjct: 472 CDGTFLLTQTGKVLACGLNEFNKLGLNQCTSGIINHDTYCEVPYATSLTLAKQLSFYKIR 531

Query: 273 QIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGD 332
            I+ G ++  ++   G + +FGS     LG G+    L    +      G  V+RVS GD
Sbjct: 532 TISPGKTHTASIDERGRLLTFGSNKCGQLGVGDYKKHLGINLL-AGPLGGKQVIRVSCGD 590

Query: 333 EHVVALDSSGYVYTWGKGYCGAL-------GHGDEIDKTLPEPLSSLKSHLAVQVCARKR 385
           E  +A     +++ WG G  G L        HG +I  + P P+     H+    C R  
Sbjct: 591 EFTIAATDDNHIFAWGNGGNGRLAMTPTERAHGSDICTSWPRPIFGSLHHVPDLSC-RGW 649

Query: 386 KTFVLVD 392
            T ++V+
Sbjct: 650 HTIIIVE 656



 Score = 68.9 bits (167), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 89/386 (23%), Positives = 149/386 (38%), Gaps = 50/386 (12%)

Query: 98  QSVEHSSDIVETSAGNMQITTGRYHTLLIS-NSSVFSC-----GSSLCGVLGHGPETTQC 151
           +S     D +++     Q+  G  H  +++    +++      G+ L G LGHG      
Sbjct: 287 KSTPQKLDAIKSGCSARQVCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHG------ 340

Query: 152 VSFTRINFPSAAHVV--------QVSASENHAAFVLQSGQVFTCGDNSSFCCG-HRDTNR 202
               R ++    HV         QVS  ++    +   GQ++  G +   C G  +    
Sbjct: 341 ---DRASYRQPKHVEKLQGKAIRQVSCGDDFTVCITDEGQLYAFGSDYYGCIGIDKAYGS 397

Query: 203 PIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSI 262
            +  P  ++     P +QV+ G N    LT    V+T G   +G+LG     D  TP+ +
Sbjct: 398 EVLEPLQLDFFLTNPVEQVSCGDNHVAVLTRNREVYTWGCGEYGRLGLDSEEDHCTPQKV 457

Query: 263 APLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS------GSNFCLGHGEQHDEL--QPRA 314
             + +  ++V +  G      +T  G V + G       G N C      HD     P A
Sbjct: 458 D-VPKTLNIVSVHCGCDGTFLLTQTGKVLACGLNEFNKLGLNQCTSGIINHDTYCEVPYA 516

Query: 315 IQTFRRKGIHVVRV---SAGDEHVVALDSSGYVYTWGKGYCGALGHGDEID----KTLPE 367
                 K +   ++   S G  H  ++D  G + T+G   CG LG GD         L  
Sbjct: 517 TSLTLAKQLSFYKIRTISPGKTHTASIDERGRLLTFGSNKCGQLGVGDYKKHLGINLLAG 576

Query: 368 PLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFP--DRGVSDKVLR--PR- 422
           PL   +    ++V      T    D   ++ +G  G G L     +R     +    PR 
Sbjct: 577 PLGGKQ---VIRVSCGDEFTIAATDDNHIFAWGNGGNGRLAMTPTERAHGSDICTSWPRP 633

Query: 423 ILDSLRAHHVSQISTGLYHTVVVTDR 448
           I  SL  HHV  +S   +HT+++ ++
Sbjct: 634 IFGSL--HHVPDLSCRGWHTIIIVEK 657



 Score = 68.6 bits (166), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 46/164 (28%), Positives = 71/164 (43%), Gaps = 6/164 (3%)

Query: 320 RKGIHVVRVSAGDEHVVALDSSGYVYTW-----GKGYCGALGHGDEIDKTLPEPLSSLKS 374
           + G    +V AG+ H   +     +YTW     G    G LGHGD      P+ +  L+ 
Sbjct: 297 KSGCSARQVCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDRASYRQPKHVEKLQG 356

Query: 375 HLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQ 434
               QV      T  + D G +Y FG   +G +G  D+    +VL P  LD    + V Q
Sbjct: 357 KAIRQVSCGDDFTVCITDEGQLYAFGSDYYGCIGI-DKAYGSEVLEPLQLDFFLTNPVEQ 415

Query: 435 ISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFI 478
           +S G  H  V+T    ++ +G  E  +LG D+      P ++ +
Sbjct: 416 VSCGDNHVAVLTRNREVYTWGCGEYGRLGLDSEEDHCTPQKVDV 459



 Score = 50.1 bits (118), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 55/204 (26%), Positives = 86/204 (42%), Gaps = 40/204 (19%)

Query: 298 NFCLGHGEQH----DELQPRAIQTFRRKGIHVV-----------RVSAGDEHVVALDSS- 341
           N CL    +     DEL  + + + RR+ +              R S  +E  +A+ +S 
Sbjct: 217 NSCLDQDPEKRPTADELLEQPLLSKRRREMEEKVTLLNGPNKRPRSSTVNEAPIAVVTSR 276

Query: 342 -GYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHL-AVQVCARKRKTFVLVDTGSVYGF 399
              VY WG G            K+ P+ L ++KS   A QVCA      V+     +Y +
Sbjct: 277 TSEVYVWGGG------------KSTPQKLDAIKSGCSARQVCAGNTHFAVVTVEKELYTW 324

Query: 400 -----GWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 454
                G    G LG  DR       +P+ ++ L+   + Q+S G   TV +TD G+L+ F
Sbjct: 325 VNMQGGTKLHGQLGHGDRA---SYRQPKHVEKLQGKAIRQVSCGDDFTVCITDEGQLYAF 381

Query: 455 GDNERAQLGHDTLRG--CLEPTEI 476
           G +    +G D   G   LEP ++
Sbjct: 382 GSDYYGCIGIDKAYGSEVLEPLQL 405


>gi|47212899|emb|CAF90789.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 3089

 Score =  109 bits (272), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 91/303 (30%), Positives = 141/303 (46%), Gaps = 26/303 (8%)

Query: 173 NHAAFVLQS-GQVFTCGDNSSFCCGHRDTN------RPIFRPRLVEALKGVPCKQVTAGL 225
            +  FV+ S G V  CG  S    G  D+N      +  F P    A+K V   + + G 
Sbjct: 422 QYCTFVISSDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPH--RAIKKVSSSKGSDG- 478

Query: 226 NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 285
             T   T  G V + G   +G+LGHG++  +  PK I    +   VV ++AG  +  AV+
Sbjct: 479 -HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVS 537

Query: 286 GNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY-V 344
            +G +Y++G G    LGHG+ +     R I T  +   +V  VS G  H +AL   G  V
Sbjct: 538 EDGELYTWGEGDFGRLGHGDSNS----RNIPTLVKDISNVGEVSCGSSHTIALSKDGRTV 593

Query: 345 YTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG---W 401
           +++G G  G LGHGD      P+ + +L+     +VCA  + +  L  TG VY +G    
Sbjct: 594 WSFGGGDNGKLGHGDTNRVYKPKVVEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGAC 653

Query: 402 MGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQ 461
           +G GS            LRP++++ L    V  IS G  H + ++    ++ +G+N   Q
Sbjct: 654 LGCGS-------SEATALRPKLIEELATTRVVDISIGDSHCLALSHDNEVYAWGNNSMGQ 706

Query: 462 LGH 464
            G 
Sbjct: 707 CGQ 709



 Score = 95.5 bits (236), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 86/243 (35%), Positives = 121/243 (49%), Gaps = 15/243 (6%)

Query: 122 HTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ-VSASENHAAFVL 179
           HTL   +   VFS G    G LGHG  +TQ      I  P    VV  VSA   H+A V 
Sbjct: 479 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYP-KLIQGPLQGKVVVCVSAGYRHSAAVS 537

Query: 180 QSGQVFTCGDNSSFCCGHRDTN-RPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH-V 237
           + G+++T G+      GH D+N R I  P LV+ +  V   +V+ G + T  L+  G  V
Sbjct: 538 EDGELYTWGEGDFGRLGHGDSNSRNI--PTLVKDISNV--GEVSCGSSHTIALSKDGRTV 593

Query: 238 HTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 297
            + G   +G+LGHGDT     PK +  L+ +  + ++ AG    LA+T  G VY++G G+
Sbjct: 594 WSFGGGDNGKLGHGDTNRVYKPKVVEALQGM-FIRKVCAGSQSSLALTSTGQVYAWGCGA 652

Query: 298 NFCLGHG-EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 356
             CLG G  +   L+P+ I+        VV +S GD H +AL     VY WG    G  G
Sbjct: 653 --CLGCGSSEATALRPKLIEEL--ATTRVVDISIGDSHCLALSHDNEVYAWGNNSMGQCG 708

Query: 357 HGD 359
            G+
Sbjct: 709 QGN 711



 Score = 62.4 bits (150), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 51/180 (28%), Positives = 82/180 (45%), Gaps = 13/180 (7%)

Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 349
           VY +GS S+  L  G Q   LQP+   TF         + AG      + S G V   GK
Sbjct: 384 VYVWGSNSSHQLVEGTQEKILQPKLAATF----ADAQTIEAGQYCTFVISSDGSVRACGK 439

Query: 350 GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKR----KTFVLVDTGSVYGFGWMGFG 405
           G  G LG GD  +++  + L + + H A++  +  +     T      G V+ +G   +G
Sbjct: 440 GSYGRLGLGDSNNQSTLKKL-TFEPHRAIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYG 498

Query: 406 SLGFPDRGVSDKVLRPRILD-SLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 464
            LG    G S     P+++   L+   V  +S G  H+  V++ G L+ +G+ +  +LGH
Sbjct: 499 KLG---HGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVSEDGELYTWGEGDFGRLGH 555



 Score = 47.0 bits (110), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 29/100 (29%), Positives = 47/100 (47%), Gaps = 2/100 (2%)

Query: 125 LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQV 184
           L S   V++ G   C  LG G      +    I   +   VV +S  ++H   +    +V
Sbjct: 639 LTSTGQVYAWGCGAC--LGCGSSEATALRPKLIEELATTRVVDISIGDSHCLALSHDNEV 696

Query: 185 FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           +  G+NS   CG  ++  PI +P+ V  L GV  +Q++AG
Sbjct: 697 YAWGNNSMGQCGQGNSTGPITKPKKVVGLDGVAIQQISAG 736


>gi|89273844|emb|CAJ81935.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
           containing protein 2 [Xenopus (Silurana) tropicalis]
          Length = 526

 Score =  109 bits (272), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 82/282 (29%), Positives = 127/282 (45%), Gaps = 11/282 (3%)

Query: 203 PIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSI 262
           PIF     E LK +    V    N   +LT    V   G+N+ G LG GD      P+ I
Sbjct: 8   PIFALCPQEDLKFIQQACVFGAGNEVLYLTKNDEVFVMGTNSSGCLGTGDAQSIIEPRRI 67

Query: 263 APLEEVGSV-VQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQT--FR 319
             L     V +   +GP +++ VT +G VYS+G  +   LG+G  +  L P  + T    
Sbjct: 68  DMLSGKRIVSLSYGSGP-HVVIVTSDGEVYSWGHNAYSQLGNGSTNQALSPCQVSTNLIN 126

Query: 320 RKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSS-LKSHLAV 378
           +K I    V+ G  H + L   G VY WG    G +G G   ++ +P  ++S L++   +
Sbjct: 127 KKAI---SVACGSHHSMVLTCDGEVYAWGYNNSGQVGSGSTANQPIPRKVTSCLQNKTVI 183

Query: 379 QVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTG 438
            +   +  +  +VD G VY +G+ G G LG    G      R   L  +R   V Q+  G
Sbjct: 184 GIACGQMSSMAVVDNGEVYAWGYNGNGQLGLGSSGNQPTPCRIAALQGIR---VEQVVCG 240

Query: 439 LYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQE 480
             HT+ +TD G ++ +G N   QLG         P ++ + +
Sbjct: 241 YAHTLALTDEGVMYAWGANSYGQLGTGNKSNQSYPVQVIVDK 282



 Score =  108 bits (269), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 80/278 (28%), Positives = 127/278 (45%), Gaps = 5/278 (1%)

Query: 125 LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS-ASENHAAFVLQSGQ 183
           L  N  VF  G++  G LG G +    +   RI+  S   +V +S  S  H   V   G+
Sbjct: 36  LTKNDEVFVMGTNSSGCLGTG-DAQSIIEPRRIDMLSGKRIVSLSYGSGPHVVIVTSDGE 94

Query: 184 VFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 243
           V++ G N+    G+  TN+ +   ++   L       V  G + +  LT  G V+  G N
Sbjct: 95  VYSWGHNAYSQLGNGSTNQALSPCQVSTNLINKKAISVACGSHHSMVLTCDGEVYAWGYN 154

Query: 244 THGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH 303
             GQ+G G T ++P P+ +    +  +V+ IA G    +AV  NG VY++G   N  LG 
Sbjct: 155 NSGQVGSGSTANQPIPRKVTSCLQNKTVIGIACGQMSSMAVVDNGEVYAWGYNGNGQLGL 214

Query: 304 GEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK 363
           G   +  QP   +    +GI V +V  G  H +AL   G +Y WG    G LG G++ ++
Sbjct: 215 GSSGN--QPTPCRIAALQGIRVEQVVCGYAHTLALTDEGVMYAWGANSYGQLGTGNKSNQ 272

Query: 364 TLPEPLSSLKSHLA-VQVCARKRKTFVLVDTGSVYGFG 400
           + P  +   K  +  +  C     +     +G VY +G
Sbjct: 273 SYPVQVIVDKERIVEIAACHSSHTSAAKSQSGQVYMWG 310



 Score = 89.0 bits (219), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 69/267 (25%), Positives = 123/267 (46%), Gaps = 14/267 (5%)

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN-FTGFL 231
           N   ++ ++ +VF  G NSS C G  D  + I  PR ++ L G     ++ G       +
Sbjct: 31  NEVLYLTKNDEVFVMGTNSSGCLGTGDA-QSIIEPRRIDMLSGKRIVSLSYGSGPHVVIV 89

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
           T  G V++ G N + QLG+G T    +P  ++        + +A G  + + +T +G VY
Sbjct: 90  TSDGEVYSWGHNAYSQLGNGSTNQALSPCQVSTNLINKKAISVACGSHHSMVLTCDGEVY 149

Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 351
           ++G  ++  +G G   ++  PR + +  +    V+ ++ G    +A+  +G VY WG   
Sbjct: 150 AWGYNNSGQVGSGSTANQPIPRKVTSCLQNKT-VIGIACGQMSSMAVVDNGEVYAWGYNG 208

Query: 352 CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLG--- 408
            G LG G   ++  P  +++L+     QV      T  L D G +Y +G   +G LG   
Sbjct: 209 NGQLGLGSSGNQPTPCRIAALQGIRVEQVVCGYAHTLALTDEGVMYAWGANSYGQLGTGN 268

Query: 409 -----FPDRGVSDKVLRPRILDSLRAH 430
                +P + + DK    RI++    H
Sbjct: 269 KSNQSYPVQVIVDK---ERIVEIAACH 292


>gi|52345808|ref|NP_001004950.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
           containing protein 2 [Xenopus (Silurana) tropicalis]
 gi|49522414|gb|AAH75441.1| MGC89218 protein [Xenopus (Silurana) tropicalis]
          Length = 526

 Score =  108 bits (271), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 82/282 (29%), Positives = 127/282 (45%), Gaps = 11/282 (3%)

Query: 203 PIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSI 262
           PIF     E LK +    V    N   +LT    V   G+N+ G LG GD      P+ I
Sbjct: 8   PIFALCPQEDLKFIQQACVFGAGNEVLYLTKNDEVFVMGTNSSGCLGTGDAQSILEPRRI 67

Query: 263 APLEEVGSV-VQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQT--FR 319
             L     V +   +GP +++ VT +G VYS+G  +   LG+G  +  L P  + T    
Sbjct: 68  DMLSGKRIVSLSYGSGP-HVVIVTSDGEVYSWGHNAYSQLGNGSTNQALSPCQVSTNLIN 126

Query: 320 RKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSS-LKSHLAV 378
           +K I    V+ G  H + L   G VY WG    G +G G   ++ +P  ++S L++   +
Sbjct: 127 KKAI---SVACGSHHSMVLTCDGEVYAWGYNNSGQVGSGSTANQPIPRKVTSCLQNKTVI 183

Query: 379 QVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTG 438
            +   +  +  +VD G VY +G+ G G LG    G      R   L  +R   V Q+  G
Sbjct: 184 GIACGQMSSMAVVDNGEVYAWGYNGNGQLGLGSSGNQPTPCRIAALQGIR---VEQVVCG 240

Query: 439 LYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQE 480
             HT+ +TD G ++ +G N   QLG         P ++ + +
Sbjct: 241 YAHTLALTDEGVMYAWGANSYGQLGTGNKSNQSYPVQVIVDK 282



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 80/278 (28%), Positives = 127/278 (45%), Gaps = 5/278 (1%)

Query: 125 LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS-ASENHAAFVLQSGQ 183
           L  N  VF  G++  G LG G +    +   RI+  S   +V +S  S  H   V   G+
Sbjct: 36  LTKNDEVFVMGTNSSGCLGTG-DAQSILEPRRIDMLSGKRIVSLSYGSGPHVVIVTSDGE 94

Query: 184 VFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 243
           V++ G N+    G+  TN+ +   ++   L       V  G + +  LT  G V+  G N
Sbjct: 95  VYSWGHNAYSQLGNGSTNQALSPCQVSTNLINKKAISVACGSHHSMVLTCDGEVYAWGYN 154

Query: 244 THGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH 303
             GQ+G G T ++P P+ +    +  +V+ IA G    +AV  NG VY++G   N  LG 
Sbjct: 155 NSGQVGSGSTANQPIPRKVTSCLQNKTVIGIACGQMSSMAVVDNGEVYAWGYNGNGQLGL 214

Query: 304 GEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK 363
           G   +  QP   +    +GI V +V  G  H +AL   G +Y WG    G LG G++ ++
Sbjct: 215 GSSGN--QPTPCRIAALQGIRVEQVVCGYAHTLALTDEGVMYAWGANSYGQLGTGNKSNQ 272

Query: 364 TLPEPLSSLKSHLA-VQVCARKRKTFVLVDTGSVYGFG 400
           + P  +   K  +  +  C     +     +G VY +G
Sbjct: 273 SYPVQVIVDKERIVEIAACHSSHTSAAKSQSGQVYMWG 310



 Score = 89.4 bits (220), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 69/267 (25%), Positives = 123/267 (46%), Gaps = 14/267 (5%)

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN-FTGFL 231
           N   ++ ++ +VF  G NSS C G  D  + I  PR ++ L G     ++ G       +
Sbjct: 31  NEVLYLTKNDEVFVMGTNSSGCLGTGDA-QSILEPRRIDMLSGKRIVSLSYGSGPHVVIV 89

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
           T  G V++ G N + QLG+G T    +P  ++        + +A G  + + +T +G VY
Sbjct: 90  TSDGEVYSWGHNAYSQLGNGSTNQALSPCQVSTNLINKKAISVACGSHHSMVLTCDGEVY 149

Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 351
           ++G  ++  +G G   ++  PR + +  +    V+ ++ G    +A+  +G VY WG   
Sbjct: 150 AWGYNNSGQVGSGSTANQPIPRKVTSCLQNKT-VIGIACGQMSSMAVVDNGEVYAWGYNG 208

Query: 352 CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLG--- 408
            G LG G   ++  P  +++L+     QV      T  L D G +Y +G   +G LG   
Sbjct: 209 NGQLGLGSSGNQPTPCRIAALQGIRVEQVVCGYAHTLALTDEGVMYAWGANSYGQLGTGN 268

Query: 409 -----FPDRGVSDKVLRPRILDSLRAH 430
                +P + + DK    RI++    H
Sbjct: 269 KSNQSYPVQVIVDK---ERIVEIAACH 292


>gi|156546048|ref|XP_001600404.1| PREDICTED: RCC1 and BTB domain-containing protein 1-like [Nasonia
           vitripennis]
          Length = 533

 Score =  108 bits (271), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 83/284 (29%), Positives = 128/284 (45%), Gaps = 9/284 (3%)

Query: 201 NRPIFRPRLVEALKGVPCKQVTAGL-NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTP 259
           N PIF     + +  +    V   L N    +T  G V+  GSNT G LG GD+     P
Sbjct: 8   NWPIFSLLEPKFISTIHMAVVYGNLGNEALIVTKDGDVYALGSNTAGCLGTGDSHSTLHP 67

Query: 260 KSIAPLEEVG-SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTF 318
           K +  L   G       +GP ++LA+T  G +YS+G      LG+G  +  L P      
Sbjct: 68  KKVEALCGKGIKTFAYGSGP-HVLALTNKGEIYSWGHNGYCELGNGSTNQGLTPTLCLNL 126

Query: 319 RRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPL-SSLKSHLA 377
             K   V  ++ G  H VAL   G VY+WG+  CG +  G   ++  P  + S+L   + 
Sbjct: 127 NEK--VVTAIACGSHHSVALTEDGEVYSWGQNNCGQVSSGISSNQGAPRKVNSALTGKVV 184

Query: 378 VQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIST 437
           V +   +  +  + D G V+G+G+ G G LG    G     L P  +  L    + +++ 
Sbjct: 185 VSIACGQTSSMAVTDVGEVFGWGYNGVGQLGI---GNYVNQLSPCKVTGLNGIVIEKVAC 241

Query: 438 GLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQEM 481
           G  HT+ ++D G L+ +G N   QLG         P ++ + EM
Sbjct: 242 GYAHTLALSDEGALYVWGGNGFGQLGLGNKANACTPIKLNVTEM 285



 Score = 98.2 bits (243), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 86/308 (27%), Positives = 145/308 (47%), Gaps = 12/308 (3%)

Query: 153 SFTRINFPSAAHVVQVSAS-ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVE 211
           S     F S  H+  V  +  N A  V + G V+  G N++ C G  D++  +  P+ VE
Sbjct: 13  SLLEPKFISTIHMAVVYGNLGNEALIVTKDGDVYALGSNTAGCLGTGDSHSTL-HPKKVE 71

Query: 212 AL--KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG 269
           AL  KG+      +G +    LT +G +++ G N + +LG+G T    TP     L E  
Sbjct: 72  ALCGKGIKTFAYGSGPHVLA-LTNKGEIYSWGHNGYCELGNGSTNQGLTPTLCLNLNE-K 129

Query: 270 SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS 329
            V  IA G  + +A+T +G VYS+G  +   +  G   ++  PR + +    G  VV ++
Sbjct: 130 VVTAIACGSHHSVALTEDGEVYSWGQNNCGQVSSGISSNQGAPRKVNS-ALTGKVVVSIA 188

Query: 330 AGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFV 389
            G    +A+   G V+ WG    G LG G+ +++  P  ++ L   +  +V      T  
Sbjct: 189 CGQTSSMAVTDVGEVFGWGYNGVGQLGIGNYVNQLSPCKVTGLNGIVIEKVACGYAHTLA 248

Query: 390 LVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYH--TVVVTD 447
           L D G++Y +G  GFG LG  ++        P  L+      +S I+T  Y+  +V +  
Sbjct: 249 LSDEGALYVWGGNGFGQLGLGNKA---NACTPIKLNVTEMGRISDIATLHYNHISVAMGQ 305

Query: 448 RGRLFGFG 455
            G+++ +G
Sbjct: 306 GGKIYMWG 313


>gi|224589107|ref|NP_001139174.1| probable E3 ubiquitin-protein ligase HERC4-like [Danio rerio]
          Length = 985

 Score =  108 bits (271), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 67/206 (32%), Positives = 111/206 (53%), Gaps = 4/206 (1%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V+Q++  + H+  +   GQ+F  G+N+    G R     I  P+ +++L G+P  Q++AG
Sbjct: 120 VIQIACGDQHSVALSNDGQLFVWGENAHGQLGLRKEQALIQSPQHLQSLCGIPVAQISAG 179

Query: 225 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 284
            N +  L++ G V   GSN+ GQLG GDT DR  P  +  L      V I+ G  +   +
Sbjct: 180 GNHSFVLSLSGVVFGWGSNSAGQLGLGDTTDRFVPTIVKSLSG-KKTVSISCGGEHTATL 238

Query: 285 TGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS-SGY 343
           +  G V++FGSG    LGH    DE  PR +      G  V +V+ G  H + L + +  
Sbjct: 239 SKGGTVFTFGSGGFGQLGHNSLKDEHHPRLVAELW--GSKVSQVTCGRHHTLVLVALTNR 296

Query: 344 VYTWGKGYCGALGHGDEIDKTLPEPL 369
           +Y++G G  G LG+G+++ +++P P+
Sbjct: 297 IYSFGCGMQGQLGNGEQVKQSVPLPV 322



 Score = 91.7 bits (226), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 65/197 (32%), Positives = 103/197 (52%), Gaps = 7/197 (3%)

Query: 270 SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQ-PRAIQTFRRKGIHVVRV 328
            V+QIA G  + +A++ +G ++ +G  ++  LG  ++   +Q P+ +Q+    GI V ++
Sbjct: 119 KVIQIACGDQHSVALSNDGQLFVWGENAHGQLGLRKEQALIQSPQHLQSLC--GIPVAQI 176

Query: 329 SAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTF 388
           SAG  H   L  SG V+ WG    G LG GD  D+ +P  + SL     V +      T 
Sbjct: 177 SAGGNHSFVLSLSGVVFGWGSNSAGQLGLGDTTDRFVPTIVKSLSGKKTVSISCGGEHTA 236

Query: 389 VLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHT-VVVTD 447
            L   G+V+ FG  GFG LG     + D+   PR++  L    VSQ++ G +HT V+V  
Sbjct: 237 TLSKGGTVFTFGSGGFGQLG--HNSLKDE-HHPRLVAELWGSKVSQVTCGRHHTLVLVAL 293

Query: 448 RGRLFGFGDNERAQLGH 464
             R++ FG   + QLG+
Sbjct: 294 TNRIYSFGCGMQGQLGN 310



 Score = 77.8 bits (190), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 63/203 (31%), Positives = 94/203 (46%), Gaps = 5/203 (2%)

Query: 208 RLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLG-HGDTLDRPTPKSIAPLE 266
           R ++ L      Q+  G   +  L+  G +   G N HGQLG   +     +P+ +  L 
Sbjct: 110 RPLKGLDNTKVIQIACGDQHSVALSNDGQLFVWGENAHGQLGLRKEQALIQSPQHLQSLC 169

Query: 267 EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVV 326
            +  V QI+AG ++   ++ +GVV+ +GS S   LG G+  D   P  +++    G   V
Sbjct: 170 GI-PVAQISAGGNHSFVLSLSGVVFGWGSNSAGQLGLGDTTDRFVPTIVKSL--SGKKTV 226

Query: 327 RVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRK 386
            +S G EH   L   G V+T+G G  G LGH    D+  P  ++ L      QV   +  
Sbjct: 227 SISCGGEHTATLSKGGTVFTFGSGGFGQLGHNSLKDEHHPRLVAELWGSKVSQVTCGRHH 286

Query: 387 TFVLVD-TGSVYGFGWMGFGSLG 408
           T VLV  T  +Y FG    G LG
Sbjct: 287 TLVLVALTNRIYSFGCGMQGQLG 309



 Score = 75.9 bits (185), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 72/229 (31%), Positives = 103/229 (44%), Gaps = 6/229 (2%)

Query: 114 MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +QI  G  H++ +SN   +F  G +  G LG   E     S   +       V Q+SA  
Sbjct: 121 IQIACGDQHSVALSNDGQLFVWGENAHGQLGLRKEQALIQSPQHLQSLCGIPVAQISAGG 180

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
           NH+  +  SG VF  G NS+   G  DT    F P +V++L G     ++ G   T  L+
Sbjct: 181 NHSFVLSLSGVVFGWGSNSAGQLGLGDTTDR-FVPTIVKSLSGKKTVSISCGGEHTATLS 239

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTG-NGVVY 291
             G V T GS   GQLGH    D   P+ +A L     V Q+  G  + L +      +Y
Sbjct: 240 KGGTVFTFGSGGFGQLGHNSLKDEHHPRLVAELWG-SKVSQVTCGRHHTLVLVALTNRIY 298

Query: 292 SFGSGSNFCLGHGEQHDELQPRAI--QTFRRKGIHVVRVSAGDEHVVAL 338
           SFG G    LG+GEQ  +  P  +   T       + ++ AG++H  AL
Sbjct: 299 SFGCGMQGQLGNGEQVKQSVPLPVLLPTDCNCEFTMEKIIAGEKHSFAL 347



 Score = 72.4 bits (176), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 49/145 (33%), Positives = 76/145 (52%), Gaps = 4/145 (2%)

Query: 325 VVRVSAGDEHVVALDSSGYVYTWGKGYCGALG-HGDEIDKTLPEPLSSLKSHLAVQVCAR 383
           V++++ GD+H VAL + G ++ WG+   G LG   ++     P+ L SL      Q+ A 
Sbjct: 120 VIQIACGDQHSVALSNDGQLFVWGENAHGQLGLRKEQALIQSPQHLQSLCGIPVAQISAG 179

Query: 384 KRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV 443
              +FVL  +G V+G+G    G LG  D   +D+ + P I+ SL       IS G  HT 
Sbjct: 180 GNHSFVLSLSGVVFGWGSNSAGQLGLGD--TTDRFV-PTIVKSLSGKKTVSISCGGEHTA 236

Query: 444 VVTDRGRLFGFGDNERAQLGHDTLR 468
            ++  G +F FG     QLGH++L+
Sbjct: 237 TLSKGGTVFTFGSGGFGQLGHNSLK 261



 Score = 45.1 bits (105), Expect = 0.078,   Method: Compositional matrix adjust.
 Identities = 33/104 (31%), Positives = 52/104 (50%), Gaps = 3/104 (2%)

Query: 361 IDK-TLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVL 419
           +DK T+  PL  L +   +Q+    + +  L + G ++ +G    G LG   R     + 
Sbjct: 103 MDKYTVCRPLKGLDNTKVIQIACGDQHSVALSNDGQLFVWGENAHGQLGL--RKEQALIQ 160

Query: 420 RPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 463
            P+ L SL    V+QIS G  H+ V++  G +FG+G N   QLG
Sbjct: 161 SPQHLQSLCGIPVAQISAGGNHSFVLSLSGVVFGWGSNSAGQLG 204


>gi|363734146|ref|XP_001235085.2| PREDICTED: serine/threonine-protein kinase Nek9 [Gallus gallus]
          Length = 965

 Score =  108 bits (271), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 84/275 (30%), Positives = 126/275 (45%), Gaps = 21/275 (7%)

Query: 207 PRLVEALK-GVPCKQVTAGLNFTGFLTIRGHVHTC-----GSNTHGQLGHGDTLDRPTPK 260
           P+ ++A+K G   +QV AG      +T+   ++T      G+  HGQLGHGD      PK
Sbjct: 350 PQKLDAIKSGCSARQVCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDRASYRQPK 409

Query: 261 SIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH--DELQPRAIQTF 318
            +  L+   ++ Q++ G  + + +T  G +Y+FGS    C+G  + +  + L+P  +  F
Sbjct: 410 HVEKLQG-KAIRQVSCGDDFTVCITDEGQLYAFGSDYYGCIGIDKAYGSEVLEPLQLDFF 468

Query: 319 RRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAV 378
               +   +VS GD HV  L  +  VYTWG G  G LG   E D   P+ +   K+   V
Sbjct: 469 LTNPVE--QVSCGDNHVAVLTRNREVYTWGCGEYGRLGLDSEEDHYTPQKVDVPKTLNIV 526

Query: 379 QVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD--RGVSDK--------VLRPRILDSLR 428
            V      TF+L  TG V   G   F  LG      G+ +              +   L 
Sbjct: 527 SVHCGCDGTFLLTQTGKVLACGLNEFNKLGLNQCTSGIINHDTYCEVPYATSLTLAKQLS 586

Query: 429 AHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 463
            + +  IS G  HT  + +RGRL  FG N+  QLG
Sbjct: 587 FYKIRTISPGKTHTASIDERGRLLTFGSNKCGQLG 621



 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 76/307 (24%), Positives = 131/307 (42%), Gaps = 40/307 (13%)

Query: 115 QITTGRYHTLLISNS-SVFSCGSSLCGVLG----HGPETTQCVSFTRINFPSAAHVVQVS 169
           Q++ G   T+ I++   +++ GS   G +G    +G E  + +   +++F     V QVS
Sbjct: 421 QVSCGDDFTVCITDEGQLYAFGSDYYGCIGIDKAYGSEVLEPL---QLDFFLTNPVEQVS 477

Query: 170 ASENHAAFVLQSGQVFTCGDNSSFCCGHR-----DTNRPIFRPRLVEALKGVPCKQVTAG 224
             +NH A + ++ +V+T G      CG       D+    + P+ V+  K +    V  G
Sbjct: 478 CGDNHVAVLTRNREVYTWG------CGEYGRLGLDSEEDHYTPQKVDVPKTLNIVSVHCG 531

Query: 225 LNFTGFLTIRGHVHTCGSNTHGQLG----------HGDTLDRPTPKSIAPLEEVG--SVV 272
            + T  LT  G V  CG N   +LG          H    + P   S+   +++    + 
Sbjct: 532 CDGTFLLTQTGKVLACGLNEFNKLGLNQCTSGIINHDTYCEVPYATSLTLAKQLSFYKIR 591

Query: 273 QIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGD 332
            I+ G ++  ++   G + +FGS     LG G+    L    +      G  V+RVS GD
Sbjct: 592 TISPGKTHTASIDERGRLLTFGSNKCGQLGVGDYKKHLGINLLAG-PLGGKQVIRVSCGD 650

Query: 333 EHVVALDSSGYVYTWGKGYCGAL-------GHGDEIDKTLPEPLSSLKSHLAVQVCARKR 385
           E  +A     +++ WG G  G L        HG +I  + P P+     H+    C R  
Sbjct: 651 EFTIAATDDNHIFAWGNGGNGRLAMTPTERAHGSDICTSWPRPIFGSLHHVPDLSC-RGW 709

Query: 386 KTFVLVD 392
            T ++V+
Sbjct: 710 HTIIVVE 716



 Score = 69.7 bits (169), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 90/386 (23%), Positives = 149/386 (38%), Gaps = 50/386 (12%)

Query: 98  QSVEHSSDIVETSAGNMQITTGRYHTLLIS-NSSVFSC-----GSSLCGVLGHGPETTQC 151
           +S     D +++     Q+  G  H  +++    +++      G+ L G LGHG      
Sbjct: 347 KSTPQKLDAIKSGCSARQVCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHG------ 400

Query: 152 VSFTRINFPSAAHVV--------QVSASENHAAFVLQSGQVFTCGDNSSFCCG-HRDTNR 202
               R ++    HV         QVS  ++    +   GQ++  G +   C G  +    
Sbjct: 401 ---DRASYRQPKHVEKLQGKAIRQVSCGDDFTVCITDEGQLYAFGSDYYGCIGIDKAYGS 457

Query: 203 PIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSI 262
            +  P  ++     P +QV+ G N    LT    V+T G   +G+LG     D  TP+ +
Sbjct: 458 EVLEPLQLDFFLTNPVEQVSCGDNHVAVLTRNREVYTWGCGEYGRLGLDSEEDHYTPQKV 517

Query: 263 APLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS------GSNFCLGHGEQHDEL--QPRA 314
             + +  ++V +  G      +T  G V + G       G N C      HD     P A
Sbjct: 518 D-VPKTLNIVSVHCGCDGTFLLTQTGKVLACGLNEFNKLGLNQCTSGIINHDTYCEVPYA 576

Query: 315 IQTFRRKGIHVVRV---SAGDEHVVALDSSGYVYTWGKGYCGALGHGDEID----KTLPE 367
                 K +   ++   S G  H  ++D  G + T+G   CG LG GD         L  
Sbjct: 577 TSLTLAKQLSFYKIRTISPGKTHTASIDERGRLLTFGSNKCGQLGVGDYKKHLGINLLAG 636

Query: 368 PLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFP--DRGVSDKVLR--PR- 422
           PL   +    ++V      T    D   ++ +G  G G L     +R     +    PR 
Sbjct: 637 PLGGKQ---VIRVSCGDEFTIAATDDNHIFAWGNGGNGRLAMTPTERAHGSDICTSWPRP 693

Query: 423 ILDSLRAHHVSQISTGLYHTVVVTDR 448
           I  SL  HHV  +S   +HT++V ++
Sbjct: 694 IFGSL--HHVPDLSCRGWHTIIVVEK 717



 Score = 68.6 bits (166), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 46/164 (28%), Positives = 71/164 (43%), Gaps = 6/164 (3%)

Query: 320 RKGIHVVRVSAGDEHVVALDSSGYVYTW-----GKGYCGALGHGDEIDKTLPEPLSSLKS 374
           + G    +V AG+ H   +     +YTW     G    G LGHGD      P+ +  L+ 
Sbjct: 357 KSGCSARQVCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDRASYRQPKHVEKLQG 416

Query: 375 HLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQ 434
               QV      T  + D G +Y FG   +G +G  D+    +VL P  LD    + V Q
Sbjct: 417 KAIRQVSCGDDFTVCITDEGQLYAFGSDYYGCIGI-DKAYGSEVLEPLQLDFFLTNPVEQ 475

Query: 435 ISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFI 478
           +S G  H  V+T    ++ +G  E  +LG D+      P ++ +
Sbjct: 476 VSCGDNHVAVLTRNREVYTWGCGEYGRLGLDSEEDHYTPQKVDV 519



 Score = 50.1 bits (118), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 55/204 (26%), Positives = 86/204 (42%), Gaps = 40/204 (19%)

Query: 298 NFCLGHGEQH----DELQPRAIQTFRRKGIHVV-----------RVSAGDEHVVALDSS- 341
           N CL    +     DEL  + + + RR+ +              R S  +E  +A+ +S 
Sbjct: 277 NSCLDQDPEKRPTADELLEQPLLSKRRREMEEKVTLLNGPNKRPRSSTVNEAPIAVVTSR 336

Query: 342 -GYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHL-AVQVCARKRKTFVLVDTGSVYGF 399
              VY WG G            K+ P+ L ++KS   A QVCA      V+     +Y +
Sbjct: 337 TSEVYVWGGG------------KSTPQKLDAIKSGCSARQVCAGNTHFAVVTVEKELYTW 384

Query: 400 -----GWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 454
                G    G LG  DR       +P+ ++ L+   + Q+S G   TV +TD G+L+ F
Sbjct: 385 VNMQGGTKLHGQLGHGDRA---SYRQPKHVEKLQGKAIRQVSCGDDFTVCITDEGQLYAF 441

Query: 455 GDNERAQLGHDTLRG--CLEPTEI 476
           G +    +G D   G   LEP ++
Sbjct: 442 GSDYYGCIGIDKAYGSEVLEPLQL 465


>gi|340378681|ref|XP_003387856.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like
           [Amphimedon queenslandica]
          Length = 599

 Score =  108 bits (271), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 80/271 (29%), Positives = 132/271 (48%), Gaps = 13/271 (4%)

Query: 196 GHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLD 255
           GH+D ++P F P +VE+L G     +  G + T  L  +G V + G+   G LGHG+  D
Sbjct: 176 GHKD-DKPRFLPNVVESLLGQNVTMIACGGSHTIALNSKGQVFSWGAGPQGCLGHGNLRD 234

Query: 256 RPTPKSI-APLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH--DELQP 312
           R +P  I  PL +V +VV +A   ++   ++ +G +Y++G    F LG+ +     + +P
Sbjct: 235 RYSPLMIDGPLRDV-NVVHVACYENHSAVISEDGNLYTWGKAGPF-LGYMDDSVTKQTKP 292

Query: 313 RAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSL 372
           R +      G  +V+V+ G  H + +D  G VY++G    G LG G +   T P  + +L
Sbjct: 293 RLVDALY--GTRIVQVACGRSHTLVIDEEGRVYSFGINKFGELGQGHDKAITKPTMVPNL 350

Query: 373 KSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHV 432
            S   V  C R     +  D G ++ +GW   G LG   +G    +  P  ++      +
Sbjct: 351 VSICKVS-CGRHHSAAIDED-GVLFMWGWGARGQLG---QGEPKSLFSPTPVNGFNDQPL 405

Query: 433 SQISTGLYHTVVVTDRGRLFGFGDNERAQLG 463
             +S G  HT  +T  G  + +GDN  +Q G
Sbjct: 406 EDVSCGYGHTAAITANGVAYCWGDNASSQCG 436



 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 76/239 (31%), Positives = 117/239 (48%), Gaps = 12/239 (5%)

Query: 241 GSNTHGQLGHGDTLDRPTPKSIAPLEEVG-SVVQIAAGPSYMLAVTGNGVVYSFGSGSNF 299
           G    G+LGH D   R  P  +  L  +G +V  IA G S+ +A+   G V+S+G+G   
Sbjct: 168 GGGDRGRLGHKDDKPRFLPNVVESL--LGQNVTMIACGGSHTIALNSKGQVFSWGAGPQG 225

Query: 300 CLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGD 359
           CLGHG   D   P  I    R  ++VV V+  + H   +   G +YTWGK     LG+ D
Sbjct: 226 CLGHGNLRDRYSPLMIDGPLRD-VNVVHVACYENHSAVISEDGNLYTWGKAG-PFLGYMD 283

Query: 360 E--IDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDK 417
           +    +T P  + +L     VQV   +  T V+ + G VY FG   FG LG   +G    
Sbjct: 284 DSVTKQTKPRLVDALYGTRIVQVACGRSHTLVIDEEGRVYSFGINKFGELG---QGHDKA 340

Query: 418 VLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 476
           + +P ++ +L +  + ++S G +H+  + + G LF +G   R QLG    +    PT +
Sbjct: 341 ITKPTMVPNLVS--ICKVSCGRHHSAAIDEDGVLFMWGWGARGQLGQGEPKSLFSPTPV 397



 Score = 99.0 bits (245), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 97/346 (28%), Positives = 154/346 (44%), Gaps = 20/346 (5%)

Query: 105 DIVETSAGN--MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFP- 160
           ++VE+  G     I  G  HT+ L S   VFS G+   G LGHG    +  S   I+ P 
Sbjct: 187 NVVESLLGQNVTMIACGGSHTIALNSKGQVFSWGAGPQGCLGHGNLRDR-YSPLMIDGPL 245

Query: 161 SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQ 220
              +VV V+  ENH+A + + G ++T G    F     D+     +PRLV+AL G    Q
Sbjct: 246 RDVNVVHVACYENHSAVISEDGNLYTWGKAGPFLGYMDDSVTKQTKPRLVDALYGTRIVQ 305

Query: 221 VTAGLNFTGFLTIRGHVHTCGSNTHGQL--GHGDTLDRPTPKSIAPLEEVGSVVQIAAGP 278
           V  G + T  +   G V++ G N  G+L  GH   + +PT   + P   + S+ +++ G 
Sbjct: 306 VACGRSHTLVIDEEGRVYSFGINKFGELGQGHDKAITKPT---MVP--NLVSICKVSCGR 360

Query: 279 SYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
            +  A+  +GV++ +G G+   LG GE      P  +  F  + +    VS G  H  A+
Sbjct: 361 HHSAAIDEDGVLFMWGWGARGQLGQGEPKSLFSPTPVNGFNDQPLE--DVSCGYGHTAAI 418

Query: 339 DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLS-SLKSHL-AVQVCARKRKTFVLVDTGSV 396
            ++G  Y WG       G    +   L  P    L S +   Q+      T ++   G +
Sbjct: 419 TANGVAYCWGDNASSQCGVPSSVYGELSSPRGIVLPSGIRPTQINCGANFTVLVTSIGQL 478

Query: 397 YGFGWMGFGSLGFPDRGVSDKVL-RPRILDSLRAHHVSQISTGLYH 441
           + +G    G LG    G + K   +P  ++SL    V  ++ G  H
Sbjct: 479 FTWGCNMSGQLG---NGEAKKTFSQPMPVESLSEKRVKMVACGEDH 521



 Score = 96.3 bits (238), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 66/233 (28%), Positives = 115/233 (49%), Gaps = 12/233 (5%)

Query: 252 DTLDRPTPKSIAPLEEVGSVV-------QIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHG 304
           D  D     S   +E  GS+V       Q+    + +L    +  +Y +G G    LGH 
Sbjct: 119 DKYDNKEAVSAKLVEMRGSIVSEDRLEVQLGTIKTKVLLKDNSCDLYLWGGGDRGRLGHK 178

Query: 305 EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKT 364
           +      P  +++    G +V  ++ G  H +AL+S G V++WG G  G LGHG+  D+ 
Sbjct: 179 DDKPRFLPNVVESLL--GQNVTMIACGGSHTIALNSKGQVFSWGAGPQGCLGHGNLRDRY 236

Query: 365 LPEPLS-SLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRI 423
            P  +   L+    V V   +  + V+ + G++Y +G  G   LG+ D  V+ K  +PR+
Sbjct: 237 SPLMIDGPLRDVNVVHVACYENHSAVISEDGNLYTWGKAG-PFLGYMDDSVT-KQTKPRL 294

Query: 424 LDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 476
           +D+L    + Q++ G  HT+V+ + GR++ FG N+  +LG    +   +PT +
Sbjct: 295 VDALYGTRIVQVACGRSHTLVIDEEGRVYSFGINKFGELGQGHDKAITKPTMV 347



 Score = 95.5 bits (236), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 97/384 (25%), Positives = 155/384 (40%), Gaps = 15/384 (3%)

Query: 100 VEHSSDIVETSAGNMQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRIN 158
           VE    IV      +Q+ T +   LL  NS  ++  G    G LGH  +  + +    + 
Sbjct: 132 VEMRGSIVSEDRLEVQLGTIKTKVLLKDNSCDLYLWGGGDRGRLGHKDDKPRFLPNV-VE 190

Query: 159 FPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEA-LKGVP 217
                +V  ++   +H   +   GQVF+ G     C GH +  R  + P +++  L+ V 
Sbjct: 191 SLLGQNVTMIACGGSHTIALNSKGQVFSWGAGPQGCLGHGNL-RDRYSPLMIDGPLRDVN 249

Query: 218 CKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAG 277
              V    N +  ++  G+++T G          D++ + T   +        +VQ+A G
Sbjct: 250 VVHVACYENHSAVISEDGNLYTWGKAGPFLGYMDDSVTKQTKPRLVDALYGTRIVQVACG 309

Query: 278 PSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
            S+ L +   G VYSFG      LG G      +P  +       + + +VS G  H  A
Sbjct: 310 RSHTLVIDEEGRVYSFGINKFGELGQGHDKAITKPTMVPNL----VSICKVSCGRHHSAA 365

Query: 338 LDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVY 397
           +D  G ++ WG G  G LG G+      P P++         V      T  +   G  Y
Sbjct: 366 IDEDGVLFMWGWGARGQLGQGEPKSLFSPTPVNGFNDQPLEDVSCGYGHTAAITANGVAY 425

Query: 398 GFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDN 457
            +G       G P   V  ++  PR +        +QI+ G   TV+VT  G+LF +G N
Sbjct: 426 CWGDNASSQCGVPS-SVYGELSSPRGIVLPSGIRPTQINCGANFTVLVTSIGQLFTWGCN 484

Query: 458 ERAQLGHDTLRGCLEPTEIFIQEM 481
              QLG+       E  + F Q M
Sbjct: 485 MSGQLGNG------EAKKTFSQPM 502



 Score = 40.8 bits (94), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 38/129 (29%), Positives = 53/129 (41%), Gaps = 10/129 (7%)

Query: 115 QITTGRYHTLLISNSSVFSC----GSSLCGVLGHGPETT--QCVSFTRINFPSAAHVVQV 168
            ++ G  HT  I+ + V  C     SS CGV    P +   +  S   I  PS     Q+
Sbjct: 407 DVSCGYGHTAAITANGVAYCWGDNASSQCGV----PSSVYGELSSPRGIVLPSGIRPTQI 462

Query: 169 SASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFT 228
           +   N    V   GQ+FT G N S   G+ +  +   +P  VE+L     K V  G +  
Sbjct: 463 NCGANFTVLVTSIGQLFTWGCNMSGQLGNGEAKKTFSQPMPVESLSEKRVKMVACGEDHI 522

Query: 229 GFLTIRGHV 237
           G L   G V
Sbjct: 523 GCLVGHGWV 531


>gi|432863735|ref|XP_004070156.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3-like [Oryzias
           latipes]
          Length = 1080

 Score =  108 bits (270), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 72/208 (34%), Positives = 110/208 (52%), Gaps = 8/208 (3%)

Query: 258 TPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ--HDELQPRAI 315
           TP+S+  L  + +V Q+A G  + + ++ +G VY++G  S   LG G++       P+ +
Sbjct: 112 TPRSLEALSGI-TVTQVACGSQHTVVLSKDGQVYTWGQNSRGQLGLGKEGCSSISSPQCV 170

Query: 316 QTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSH 375
           ++     + VV+VSAG +H  AL  SG V+ WG+  CG LG GD  D+  P  +  L   
Sbjct: 171 RSL--SSMPVVQVSAGGDHSFALSVSGSVFGWGRNDCGQLGLGDTTDRETPTLVHYLNMK 228

Query: 376 LAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQI 435
             V     K  T VL   G+V+ FG   +G LG          L PR++  L    V++I
Sbjct: 229 KTVFAACGKDHTAVLTMDGTVFTFGSGHYGQLG---HNSFRNALCPRLVAELWGAKVTKI 285

Query: 436 STGLYHTVVVTDRGRLFGFGDNERAQLG 463
           + G YHT+V+TD  +++ FG NE  QLG
Sbjct: 286 ACGRYHTLVLTDHMKVYSFGCNEHGQLG 313



 Score = 95.5 bits (236), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 73/220 (33%), Positives = 102/220 (46%), Gaps = 12/220 (5%)

Query: 193 FCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGD 252
           FC    D+  P F PR +EAL G+   QV  G   T  L+  G V+T G N+ GQLG G 
Sbjct: 102 FCV---DSPHPPFTPRSLEALSGITVTQVACGSQHTVVLSKDGQVYTWGQNSRGQLGLGK 158

Query: 253 T--LDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC--LGHGEQHD 308
                  +P+ +  L  +  VVQ++AG  +  A++ +G V  FG G N C  LG G+  D
Sbjct: 159 EGCSSISSPQCVRSLSSM-PVVQVSAGGDHSFALSVSGSV--FGWGRNDCGQLGLGDTTD 215

Query: 309 ELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEP 368
              P  +     K    V  + G +H   L   G V+T+G G+ G LGH    +   P  
Sbjct: 216 RETPTLVHYLNMK--KTVFAACGKDHTAVLTMDGTVFTFGSGHYGQLGHNSFRNALCPRL 273

Query: 369 LSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLG 408
           ++ L      ++   +  T VL D   VY FG    G LG
Sbjct: 274 VAELWGAKVTKIACGRYHTLVLTDHMKVYSFGCNEHGQLG 313



 Score = 95.1 bits (235), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 77/246 (31%), Positives = 114/246 (46%), Gaps = 14/246 (5%)

Query: 125 LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQV 184
           L+S++ V  C  S      H P T + +        S   V QV+    H   + + GQV
Sbjct: 94  LLSDTGVVFCVDS-----PHPPFTPRSLEAL-----SGITVTQVACGSQHTVVLSKDGQV 143

Query: 185 FTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 243
           +T G NS    G  ++    I  P+ V +L  +P  QV+AG + +  L++ G V   G N
Sbjct: 144 YTWGQNSRGQLGLGKEGCSSISSPQCVRSLSSMPVVQVSAGGDHSFALSVSGSVFGWGRN 203

Query: 244 THGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH 303
             GQLG GDT DR TP  +  L  +   V  A G  +   +T +G V++FGSG    LGH
Sbjct: 204 DCGQLGLGDTTDRETPTLVHYLN-MKKTVFAACGKDHTAVLTMDGTVFTFGSGHYGQLGH 262

Query: 304 GEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK 363
               + L PR +      G  V +++ G  H + L     VY++G    G LG  +E   
Sbjct: 263 NSFRNALCPRLVAELW--GAKVTKIACGRYHTLVLTDHMKVYSFGCNEHGQLGPREETHP 320

Query: 364 TLPEPL 369
            +P P+
Sbjct: 321 CVPLPV 326



 Score = 89.4 bits (220), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 66/191 (34%), Positives = 93/191 (48%), Gaps = 9/191 (4%)

Query: 285 TGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           T +GV     +G  FC+     H    PR+++     GI V +V+ G +H V L   G V
Sbjct: 88  TDDGVTLLSDTGVVFCVD--SPHPPFTPRSLEAL--SGITVTQVACGSQHTVVLSKDGQV 143

Query: 345 YTWGKGYCGALGHGDEIDKTL--PEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWM 402
           YTWG+   G LG G E   ++  P+ + SL S   VQV A    +F L  +GSV+G+G  
Sbjct: 144 YTWGQNSRGQLGLGKEGCSSISSPQCVRSLSSMPVVQVSAGGDHSFALSVSGSVFGWGRN 203

Query: 403 GFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQL 462
             G LG  D   +D+   P ++  L        + G  HT V+T  G +F FG     QL
Sbjct: 204 DCGQLGLGD--TTDRE-TPTLVHYLNMKKTVFAACGKDHTAVLTMDGTVFTFGSGHYGQL 260

Query: 463 GHDTLRGCLEP 473
           GH++ R  L P
Sbjct: 261 GHNSFRNALCP 271



 Score = 73.2 bits (178), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 72/220 (32%), Positives = 104/220 (47%), Gaps = 7/220 (3%)

Query: 115 QITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSASE 172
           Q+  G  HT+++S +  V++ G +  G LG G E    +S  + +   S+  VVQVSA  
Sbjct: 126 QVACGSQHTVVLSKDGQVYTWGQNSRGQLGLGKEGCSSISSPQCVRSLSSMPVVQVSAGG 185

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDT-NRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
           +H+  +  SG VF  G N     G  DT +R    P LV  L          G + T  L
Sbjct: 186 DHSFALSVSGSVFGWGRNDCGQLGLGDTTDRET--PTLVHYLNMKKTVFAACGKDHTAVL 243

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
           T+ G V T GS  +GQLGH    +   P+ +A L     V +IA G  + L +T +  VY
Sbjct: 244 TMDGTVFTFGSGHYGQLGHNSFRNALCPRLVAELWG-AKVTKIACGRYHTLVLTDHMKVY 302

Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG 331
           SFG   +  LG  E+     P  +Q   R+G  +  + AG
Sbjct: 303 SFGCNEHGQLGPREETHPCVPLPVQ-LPREGPIIQNIFAG 341



 Score = 59.3 bits (142), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 54/171 (31%), Positives = 81/171 (47%), Gaps = 5/171 (2%)

Query: 109 TSAGNMQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ 167
           +S   +Q++ G  H+  +S S SVF  G + CG LG G +TT   + T +++ +    V 
Sbjct: 174 SSMPVVQVSAGGDHSFALSVSGSVFGWGRNDCGQLGLG-DTTDRETPTLVHYLNMKKTVF 232

Query: 168 VSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF 227
            +  ++H A +   G VFT G       GH ++ R    PRLV  L G    ++  G   
Sbjct: 233 AACGKDHTAVLTMDGTVFTFGSGHYGQLGH-NSFRNALCPRLVAELWGAKVTKIACGRYH 291

Query: 228 TGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ-IAAG 277
           T  LT    V++ G N HGQLG  +      P  +  L   G ++Q I AG
Sbjct: 292 TLVLTDHMKVYSFGCNEHGQLGPREETHPCVPLPVQ-LPREGPIIQNIFAG 341


>gi|428177727|gb|EKX46605.1| hypothetical protein GUITHDRAFT_48927, partial [Guillardia theta
           CCMP2712]
          Length = 316

 Score =  108 bits (270), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 85/293 (29%), Positives = 127/293 (43%), Gaps = 7/293 (2%)

Query: 164 HVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTA 223
            V  V+    H+A V+ SG+V   G+N    CG   T      P  V +L GV C  V+ 
Sbjct: 30  QVRDVACGLVHSAMVMGSGEVLCWGENKYGQCG-TGTQEQTEHPTFVGSLFGVACMSVSC 88

Query: 224 GLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
           G   T  ++  G V + G   +GQLGHG   +  TP  +  +     V+ +  G  + + 
Sbjct: 89  GGAHTVVVSEDGRVFSWGLGANGQLGHGSRDNLTTPSVVQAMRGR-DVLAVTCGVGHTVI 147

Query: 284 VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 343
           V   G +Y+ G   N   G G   D L P+ +++ R +G+     S G  H   +   G 
Sbjct: 148 VLAGGELYTCGWNKNGQCGVGSTSDLLSPQCVESLRGEGVQ--HASCGAGHTAVVTGGGE 205

Query: 344 VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 403
           V+T+G G CG LGHGD  D ++P  + +L   +   V   +  T        V+GFG   
Sbjct: 206 VFTFGSGSCGQLGHGDCQDLSMPRRVGALVGIVMSMVACGEEYTVCAAFDHRVFGFGLNN 265

Query: 404 FGSLGFPDRGVSDKVL-RPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFG 455
            G LG      S   L  PR ++ L+   V          + +T RG L  +G
Sbjct: 266 VGQLGASS--TSHPYLSEPRQMEFLKEEEVELCKCNQSEVIALTRRGALRAWG 316



 Score = 94.7 bits (234), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 82/282 (29%), Positives = 127/282 (45%), Gaps = 15/282 (5%)

Query: 207 PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 266
           PR+++   G   + V  GL  +  +   G V   G N +GQ G G       P  +  L 
Sbjct: 20  PRMLKKAMGRQVRDVACGLVHSAMVMGSGEVLCWGENKYGQCGTGTQEQTEHPTFVGSLF 79

Query: 267 EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVV 326
            V + + ++ G ++ + V+ +G V+S+G G+N  LGHG + +   P  +Q  R  G  V+
Sbjct: 80  GV-ACMSVSCGGAHTVVVSEDGRVFSWGLGANGQLGHGSRDNLTTPSVVQAMR--GRDVL 136

Query: 327 RVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRK 386
            V+ G  H V + + G +YT G    G  G G   D   P+ + SL+             
Sbjct: 137 AVTCGVGHTVIVLAGGELYTCGWNKNGQCGVGSTSDLLSPQCVESLRGEGVQHASCGAGH 196

Query: 387 TFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT 446
           T V+   G V+ FG    G LG  D      +  PR + +L    +S ++ G  +TV   
Sbjct: 197 TAVVTGGGEVFTFGSGSCGQLGHGD---CQDLSMPRRVGALVGIVMSMVACGEEYTVCAA 253

Query: 447 DRGRLFGFGDNERAQLG-----HDTLRGCLEPTEI-FIQEME 482
              R+FGFG N   QLG     H  L    EP ++ F++E E
Sbjct: 254 FDHRVFGFGLNNVGQLGASSTSHPYLS---EPRQMEFLKEEE 292



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 64/215 (29%), Positives = 98/215 (45%), Gaps = 8/215 (3%)

Query: 251 GDTLDRPTPKSIAPLEEVGSVVQ-IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDE 309
           G+ +   TP+ +   + +G  V+ +A G  +   V G+G V  +G       G G Q   
Sbjct: 12  GEQVSSSTPRMLK--KAMGRQVRDVACGLVHSAMVMGSGEVLCWGENKYGQCGTGTQEQT 69

Query: 310 LQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPL 369
             P  + +    G+  + VS G  H V +   G V++WG G  G LGHG   + T P  +
Sbjct: 70  EHPTFVGSLF--GVACMSVSCGGAHTVVVSEDGRVFSWGLGANGQLGHGSRDNLTTPSVV 127

Query: 370 SSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRA 429
            +++    + V      T +++  G +Y  GW   G  G    G +  +L P+ ++SLR 
Sbjct: 128 QAMRGRDVLAVTCGVGHTVIVLAGGELYTCGWNKNGQCGV---GSTSDLLSPQCVESLRG 184

Query: 430 HHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 464
             V   S G  HT VVT  G +F FG     QLGH
Sbjct: 185 EGVQHASCGAGHTAVVTGGGEVFTFGSGSCGQLGH 219



 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 74/245 (30%), Positives = 115/245 (46%), Gaps = 22/245 (8%)

Query: 114 MQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAH------VV 166
           M ++ G  HT+++S +  VFS G    G LGHG       S   +  PS         V+
Sbjct: 84  MSVSCGGAHTVVVSEDGRVFSWGLGANGQLGHG-------SRDNLTTPSVVQAMRGRDVL 136

Query: 167 QVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN 226
            V+    H   VL  G+++TCG N +  CG   T+  +  P+ VE+L+G   +  + G  
Sbjct: 137 AVTCGVGHTVIVLAGGELYTCGWNKNGQCGVGSTS-DLLSPQCVESLRGEGVQHASCGAG 195

Query: 227 FTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLAVT 285
            T  +T  G V T GS + GQLGHGD  D   P+ +  L  VG V+  +A G  Y +   
Sbjct: 196 HTAVVTGGGEVFTFGSGSCGQLGHGDCQDLSMPRRVGAL--VGIVMSMVACGEEYTVCAA 253

Query: 286 GNGVVYSFGSGSNFCLGHGE-QHDEL-QPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 343
            +  V+ FG  +   LG     H  L +PR ++  + + + + + +     V+AL   G 
Sbjct: 254 FDHRVFGFGLNNVGQLGASSTSHPYLSEPRQMEFLKEEEVELCKCN--QSEVIALTRRGA 311

Query: 344 VYTWG 348
           +  WG
Sbjct: 312 LRAWG 316


>gi|440790434|gb|ELR11717.1| regulator of chromosome condensation (RCC1) repeat domain containing
            protein [Acanthamoeba castellanii str. Neff]
          Length = 1563

 Score =  108 bits (270), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 78/237 (32%), Positives = 119/237 (50%), Gaps = 8/237 (3%)

Query: 221  VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPT--PKSIAPLEEVGSVVQIAAGP 278
            V+ G N    LT  GHV+T G N  G+LGHGD    P   PK +   +    V ++  G 
Sbjct: 880  VSCGWNHCAALTENGHVYTWGRNGSGELGHGDKSGVPQLHPKQVIFFKS-KCVKEVVCGG 938

Query: 279  SYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
             + LA T +G VY +G+G    LG G++     P  I+T R+  +HV +++AG  H + +
Sbjct: 939  EHTLARTESGSVYGWGNGRIGQLGLGDRTLHWLPVPIKTLRK--MHVTQLAAGYAHTIVV 996

Query: 339  DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYG 398
              SG V  +G G  G LG G   D  +P  L ++ S   VQ       T +L + G VY 
Sbjct: 997  LKSGEVMVFGGGEVGQLGTGMRKDLLVPTKLQAMPS--IVQAACGYCHTALLTEAGEVYT 1054

Query: 399  FGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFG 455
             G    G LG  D   +D+ L P++++ L    +  I+ G +HT+ +TD   ++ +G
Sbjct: 1055 CGSAMSGQLGHADNLQNDR-LAPKMVEGLNGKRIRFIACGSFHTIAITDLDNVYTWG 1110



 Score =  105 bits (262), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 97/323 (30%), Positives = 141/323 (43%), Gaps = 20/323 (6%)

Query: 145  GPETTQ---CVSFTRINFP-----SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCG 196
            GPE+ Q     S  ++N P     S   VV VS   NH A + ++G V+T G N S   G
Sbjct: 849  GPESEQDDGVSSGGKLNVPFGGLVSMRQVVNVSCGWNHCAALTENGHVYTWGRNGSGELG 908

Query: 197  HRD-TNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLD 255
            H D +  P   P+ V   K    K+V  G   T   T  G V+  G+   GQLG GD   
Sbjct: 909  HGDKSGVPQLHPKQVIFFKSKCVKEVVCGGEHTLARTESGSVYGWGNGRIGQLGLGDRTL 968

Query: 256  RPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAI 315
               P  I  L ++  V Q+AAG ++ + V  +G V  FG G    LG G + D L P  +
Sbjct: 969  HWLPVPIKTLRKM-HVTQLAAGYAHTIVVLKSGEVMVFGGGEVGQLGTGMRKDLLVPTKL 1027

Query: 316  QTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEI--DKTLPEPLSSLK 373
            Q        +V+ + G  H   L  +G VYT G    G LGH D +  D+  P+ +  L 
Sbjct: 1028 QAMP----SIVQAACGYCHTALLTEAGEVYTCGSAMSGQLGHADNLQNDRLAPKMVEGLN 1083

Query: 374  SHLAVQVCARKRKTFVLVDTGSVYGFGWM----GFGSLGFPDRGVSDKVLRPRILDSLRA 429
                  +      T  + D  +VY +G +      G++    +    K + P I+  L  
Sbjct: 1084 GKRIRFIACGSFHTIAITDLDNVYTWGGVQGTDSDGAMRQERKAAILKRVTPSIVKGLMG 1143

Query: 430  HHVSQISTGLYHTVVVTDRGRLF 452
              +S +S G  H+V  T  G ++
Sbjct: 1144 KRISLVSCGHAHSVATTMDGEVY 1166



 Score = 95.5 bits (236), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 65/196 (33%), Positives = 100/196 (51%), Gaps = 9/196 (4%)

Query: 271  VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH--DELQPRAIQTFRRKGIHVVRV 328
            VV ++ G ++  A+T NG VY++G   +  LGHG++    +L P+ +  F+ K +    V
Sbjct: 877  VVNVSCGWNHCAALTENGHVYTWGRNGSGELGHGDKSGVPQLHPKQVIFFKSKCVK--EV 934

Query: 329  SAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTF 388
              G EH +A   SG VY WG G  G LG GD     LP P+ +L+     Q+ A    T 
Sbjct: 935  VCGGEHTLARTESGSVYGWGNGRIGQLGLGDRTLHWLPVPIKTLRKMHVTQLAAGYAHTI 994

Query: 389  VLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDR 448
            V++ +G V  FG    G LG    G+   +L P  L ++ +  + Q + G  HT ++T+ 
Sbjct: 995  VVLKSGEVMVFGGGEVGQLG---TGMRKDLLVPTKLQAMPS--IVQAACGYCHTALLTEA 1049

Query: 449  GRLFGFGDNERAQLGH 464
            G ++  G     QLGH
Sbjct: 1050 GEVYTCGSAMSGQLGH 1065



 Score = 93.2 bits (230), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 57/155 (36%), Positives = 80/155 (51%), Gaps = 5/155 (3%)

Query: 324  HVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE--IDKTLPEPLSSLKSHLAVQVC 381
             VV VS G  H  AL  +G+VYTWG+   G LGHGD+  + +  P+ +   KS    +V 
Sbjct: 876  QVVNVSCGWNHCAALTENGHVYTWGRNGSGELGHGDKSGVPQLHPKQVIFFKSKCVKEVV 935

Query: 382  ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYH 441
                 T    ++GSVYG+G    G LG  DR +      P  + +LR  HV+Q++ G  H
Sbjct: 936  CGGEHTLARTESGSVYGWGNGRIGQLGLGDRTLH---WLPVPIKTLRKMHVTQLAAGYAH 992

Query: 442  TVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 476
            T+VV   G +  FG  E  QLG    +  L PT++
Sbjct: 993  TIVVLKSGEVMVFGGGEVGQLGTGMRKDLLVPTKL 1027



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 94/336 (27%), Positives = 139/336 (41%), Gaps = 42/336 (12%)

Query: 115  QITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
            ++  G  HTL  + S SV+  G+   G LG G  T   +    I      HV Q++A   
Sbjct: 933  EVVCGGEHTLARTESGSVYGWGNGRIGQLGLGDRTLHWLPVP-IKTLRKMHVTQLAAGYA 991

Query: 174  HAAFVLQSGQV--FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
            H   VL+SG+V  F  G+      G R   + +  P  ++A+  +   Q   G   T  L
Sbjct: 992  HTIVVLKSGEVMVFGGGEVGQLGTGMR---KDLLVPTKLQAMPSI--VQAACGYCHTALL 1046

Query: 232  TIRGHVHTCGSNTHGQLGHGDTL--DRPTPKSIAPLEEVGSVVQ-IAAGPSYMLAVTGNG 288
            T  G V+TCGS   GQLGH D L  DR  PK +  L   G  ++ IA G  + +A+T   
Sbjct: 1047 TEAGEVYTCGSAMSGQLGHADNLQNDRLAPKMVEGLN--GKRIRFIACGSFHTIAITDLD 1104

Query: 289  VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVR---------VSAGDEHVVALD 339
             VY++G       G        Q R     +R    +V+         VS G  H VA  
Sbjct: 1105 NVYTWGG----VQGTDSDGAMRQERKAAILKRVTPSIVKGLMGKRISLVSCGHAHSVATT 1160

Query: 340  SSGYVYTW-------------GKGYCGALGHGDE--IDKTLPEPLSSLKSHLAVQVCARK 384
              G VY W             G G   A G  +   +   +P+   +    +     A +
Sbjct: 1161 MDGEVYVWSSTGSLQPPLLLRGSGLSTASGTTEAPLLVSAIPDGQDAKSKPVVKHAAAGE 1220

Query: 385  RKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLR 420
              T V+ + G +Y +G   FG LG  D+G   ++++
Sbjct: 1221 EFTLVVTENGLLYSWGSGAFGQLGLGDQGDRAEIVQ 1256



 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 63/248 (25%), Positives = 102/248 (41%), Gaps = 38/248 (15%)

Query: 114  MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHG---------PETTQCVSFTRINFPSAA 163
            +Q   G  HT L++ +  V++CGS++ G LGH          P+  + ++  RI F    
Sbjct: 1034 VQAACGYCHTALLTEAGEVYTCGSAMSGQLGHADNLQNDRLAPKMVEGLNGKRIRF---- 1089

Query: 164  HVVQVSASENHAAFVLQSGQVFTCGD---NSSFCCGHRDTNRPIFR---PRLVEALKGVP 217
                ++    H   +     V+T G      S     ++    I +   P +V+ L G  
Sbjct: 1090 ----IACGSFHTIAITDLDNVYTWGGVQGTDSDGAMRQERKAAILKRVTPSIVKGLMGKR 1145

Query: 218  CKQVTAGLNFTGFLTIRGHVHTCGSNTHGQ---LGHGDTLDRPTPKSIAPL--------E 266
               V+ G   +   T+ G V+   S    Q   L  G  L   +  + APL        +
Sbjct: 1146 ISLVSCGHAHSVATTMDGEVYVWSSTGSLQPPLLLRGSGLSTASGTTEAPLLVSAIPDGQ 1205

Query: 267  EVGS---VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGI 323
            +  S   V   AAG  + L VT NG++YS+GSG+   LG G+Q D  +   +        
Sbjct: 1206 DAKSKPVVKHAAAGEEFTLVVTENGLLYSWGSGAFGQLGLGDQGDRAEIVQVAKSEESRR 1265

Query: 324  HVVRVSAG 331
              VR++ G
Sbjct: 1266 RSVRLTYG 1273


>gi|296189284|ref|XP_002742715.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 2
           [Callithrix jacchus]
          Length = 577

 Score =  108 bits (270), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 81/275 (29%), Positives = 123/275 (44%), Gaps = 5/275 (1%)

Query: 128 NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS-ASENHAAFVLQSGQVFT 186
           N  +F  G++ CG LG G +    +   R++  S   +  +S  S  H       G+VFT
Sbjct: 90  NDEIFVLGTNCCGCLGLG-DVQSTIEPRRLDSLSGKKIACLSYGSGPHIVLATTEGEVFT 148

Query: 187 CGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHG 246
            G N+    G+  TN  +    +   L      +V  G   +  LT  G V   G N  G
Sbjct: 149 WGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSG 208

Query: 247 QLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ 306
           Q+G G T+++PTP+ +    +   VV IA G    +AV  +G VY +G   N  LG G  
Sbjct: 209 QVGSGSTVNQPTPRRVTGCLQNKVVVTIACGQMCCMAVVDSGEVYVWGYNGNGQLGLGNS 268

Query: 307 HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP 366
            +  QP   +    +GI V RV+ G  H + L   G VY WG    G LG G++ +++ P
Sbjct: 269 GN--QPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYP 326

Query: 367 EPLSSLKSH-LAVQVCARKRKTFVLVDTGSVYGFG 400
            P++  K   + +  C     +      G VY +G
Sbjct: 327 TPVTVEKDRIIEIAACHSTHTSAAKTQGGHVYMWG 361



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 78/281 (27%), Positives = 131/281 (46%), Gaps = 8/281 (2%)

Query: 203 PIFRPRLVEALKGVPCKQVTAGL-NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKS 261
           PIF     E L+ +    V  G  N   + T+   +   G+N  G LG GD      P+ 
Sbjct: 58  PIFSLCSEEELQLIRQACVFGGAGNEVLYTTVNDEIFVLGTNCCGCLGLGDVQSTIEPRR 117

Query: 262 IAPLE-EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRR 320
           +  L  +  + +   +GP  +LA T  G V+++G  +   LG+G  +  L P  I T   
Sbjct: 118 LDSLSGKKIACLSYGSGPHIVLATT-EGEVFTWGHNAYSQLGNGTTNHGLVPCHIST-NL 175

Query: 321 KGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLS-SLKSHLAVQ 379
               V+ V+ G  H + L S G V+ WG    G +G G  +++  P  ++  L++ + V 
Sbjct: 176 SNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQPTPRRVTGCLQNKVVVT 235

Query: 380 VCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGL 439
           +   +     +VD+G VY +G+ G G LG  + G      R   L  +R   V +++ G 
Sbjct: 236 IACGQMCCMAVVDSGEVYVWGYNGNGQLGLGNSGNQPTPCRVAALQGIR---VQRVACGY 292

Query: 440 YHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQE 480
            HT+V+TD G+++ +G N   QLG         PT + +++
Sbjct: 293 AHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPVTVEK 333



 Score = 90.1 bits (222), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 67/238 (28%), Positives = 111/238 (46%), Gaps = 5/238 (2%)

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG--VPCKQVTAGLNFTGF 230
           N   +   + ++F  G N   C G  D    I  PR +++L G  + C    +G +    
Sbjct: 82  NEVLYTTVNDEIFVLGTNCCGCLGLGDVQSTI-EPRRLDSLSGKKIACLSYGSGPHIV-L 139

Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 290
            T  G V T G N + QLG+G T     P  I+       V+++A G  + L +T +G V
Sbjct: 140 ATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEV 199

Query: 291 YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKG 350
           +++G  ++  +G G   ++  PR +    +  + VV ++ G    +A+  SG VY WG  
Sbjct: 200 FAWGYNNSGQVGSGSTVNQPTPRRVTGCLQNKV-VVTIACGQMCCMAVVDSGEVYVWGYN 258

Query: 351 YCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLG 408
             G LG G+  ++  P  +++L+     +V      T VL D G VY +G   +G LG
Sbjct: 259 GNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLG 316


>gi|296189286|ref|XP_002742716.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 3
           [Callithrix jacchus]
          Length = 556

 Score =  108 bits (270), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 81/275 (29%), Positives = 123/275 (44%), Gaps = 5/275 (1%)

Query: 128 NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS-ASENHAAFVLQSGQVFT 186
           N  +F  G++ CG LG G +    +   R++  S   +  +S  S  H       G+VFT
Sbjct: 69  NDEIFVLGTNCCGCLGLG-DVQSTIEPRRLDSLSGKKIACLSYGSGPHIVLATTEGEVFT 127

Query: 187 CGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHG 246
            G N+    G+  TN  +    +   L      +V  G   +  LT  G V   G N  G
Sbjct: 128 WGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSG 187

Query: 247 QLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ 306
           Q+G G T+++PTP+ +    +   VV IA G    +AV  +G VY +G   N  LG G  
Sbjct: 188 QVGSGSTVNQPTPRRVTGCLQNKVVVTIACGQMCCMAVVDSGEVYVWGYNGNGQLGLGNS 247

Query: 307 HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP 366
            +  QP   +    +GI V RV+ G  H + L   G VY WG    G LG G++ +++ P
Sbjct: 248 GN--QPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYP 305

Query: 367 EPLSSLKSH-LAVQVCARKRKTFVLVDTGSVYGFG 400
            P++  K   + +  C     +      G VY +G
Sbjct: 306 TPVTVEKDRIIEIAACHSTHTSAAKTQGGHVYMWG 340



 Score =  101 bits (251), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 78/281 (27%), Positives = 131/281 (46%), Gaps = 8/281 (2%)

Query: 203 PIFRPRLVEALKGVPCKQVTAGL-NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKS 261
           PIF     E L+ +    V  G  N   + T+   +   G+N  G LG GD      P+ 
Sbjct: 37  PIFSLCSEEELQLIRQACVFGGAGNEVLYTTVNDEIFVLGTNCCGCLGLGDVQSTIEPRR 96

Query: 262 IAPLE-EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRR 320
           +  L  +  + +   +GP  +LA T  G V+++G  +   LG+G  +  L P  I T   
Sbjct: 97  LDSLSGKKIACLSYGSGPHIVLATT-EGEVFTWGHNAYSQLGNGTTNHGLVPCHIST-NL 154

Query: 321 KGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLS-SLKSHLAVQ 379
               V+ V+ G  H + L S G V+ WG    G +G G  +++  P  ++  L++ + V 
Sbjct: 155 SNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQPTPRRVTGCLQNKVVVT 214

Query: 380 VCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGL 439
           +   +     +VD+G VY +G+ G G LG  + G      R   L  +R   V +++ G 
Sbjct: 215 IACGQMCCMAVVDSGEVYVWGYNGNGQLGLGNSGNQPTPCRVAALQGIR---VQRVACGY 271

Query: 440 YHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQE 480
            HT+V+TD G+++ +G N   QLG         PT + +++
Sbjct: 272 AHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPVTVEK 312



 Score = 90.1 bits (222), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 67/238 (28%), Positives = 111/238 (46%), Gaps = 5/238 (2%)

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG--VPCKQVTAGLNFTGF 230
           N   +   + ++F  G N   C G  D    I  PR +++L G  + C    +G +    
Sbjct: 61  NEVLYTTVNDEIFVLGTNCCGCLGLGDVQSTI-EPRRLDSLSGKKIACLSYGSGPHIV-L 118

Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 290
            T  G V T G N + QLG+G T     P  I+       V+++A G  + L +T +G V
Sbjct: 119 ATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEV 178

Query: 291 YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKG 350
           +++G  ++  +G G   ++  PR +    +  + VV ++ G    +A+  SG VY WG  
Sbjct: 179 FAWGYNNSGQVGSGSTVNQPTPRRVTGCLQNKV-VVTIACGQMCCMAVVDSGEVYVWGYN 237

Query: 351 YCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLG 408
             G LG G+  ++  P  +++L+     +V      T VL D G VY +G   +G LG
Sbjct: 238 GNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLG 295


>gi|260796835|ref|XP_002593410.1| hypothetical protein BRAFLDRAFT_119547 [Branchiostoma floridae]
 gi|229278634|gb|EEN49421.1| hypothetical protein BRAFLDRAFT_119547 [Branchiostoma floridae]
          Length = 538

 Score =  108 bits (270), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 86/285 (30%), Positives = 136/285 (47%), Gaps = 16/285 (5%)

Query: 203 PIFR---PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTP 259
           PIF    P  + ++K   C   ++G N    +T    V+  GSN    LG GD      P
Sbjct: 15  PIFSLLDPEFISSIKQA-CVFGSSG-NEAIVITQDDDVYALGSNCSSCLGVGDAQSGLEP 72

Query: 260 KSIAPLEEVGSV-VQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTF 318
           + I  L +   V +   +GP ++L  T NG +YS+G      LG+G  +  L P+ I T 
Sbjct: 73  RKIDILCKKKIVDIGYGSGP-HVLVCTDNGDLYSWGHNGYSQLGNGSTNQGLSPQLITT- 130

Query: 319 RRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSS-LKSHLA 377
              G  VV+V+ G  H +AL   G V+ WG   CG +G G   ++  P  +++ L +   
Sbjct: 131 NLIGRKVVKVACGSHHSLALTLEGEVFAWGYNNCGQVGSGTTTNQATPRKVAACLGTRKV 190

Query: 378 VQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRI--LDSLRAHHVSQI 435
            ++   +  +  L+D G VYG+G+ G G LG     V + V +P    + +L+   V QI
Sbjct: 191 TEIACGQTSSMALLDNGEVYGWGYNGNGQLG-----VGNNVNQPNPCRVAALQQMIVVQI 245

Query: 436 STGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQE 480
             G  H + +TD G ++ +G N   QLG       + PT+I + +
Sbjct: 246 VCGYAHAMALTDEGSVYAWGANSYGQLGTGNKANLVTPTKIALDK 290



 Score = 92.0 bits (227), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 81/299 (27%), Positives = 138/299 (46%), Gaps = 29/299 (9%)

Query: 170 ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
           +S N A  + Q   V+  G N S C G  D    +  PR ++ L    CK+    + +  
Sbjct: 36  SSGNEAIVITQDDDVYALGSNCSSCLGVGDAQSGL-EPRKIDIL----CKKKIVDIGYGS 90

Query: 230 -----FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 284
                  T  G +++ G N + QLG+G T    +P+ I        VV++A G  + LA+
Sbjct: 91  GPHVLVCTDNGDLYSWGHNGYSQLGNGSTNQGLSPQLITTNLIGRKVVKVACGSHHSLAL 150

Query: 285 TGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTF--RRKGIHVVRVSAGDEHVVALDSSG 342
           T  G V+++G  +   +G G   ++  PR +      RK   V  ++ G    +AL  +G
Sbjct: 151 TLEGEVFAWGYNNCGQVGSGTTTNQATPRKVAACLGTRK---VTEIACGQTSSMALLDNG 207

Query: 343 YVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWM 402
            VY WG    G LG G+ +++  P  +++L+  + VQ+         L D GSVY +G  
Sbjct: 208 EVYGWGYNGNGQLGVGNNVNQPNPCRVAALQQMIVVQIVCGYAHAMALTDEGSVYAWGAN 267

Query: 403 GFGSLGFPDRGVSDKVLRPRI-LDSLR-----AHHVSQISTGLYHTVVVTDRGRLFGFG 455
            +G LG  ++  ++ V   +I LD  R     A H + +S+       +T  G+++ +G
Sbjct: 268 SYGQLGTGNK--ANLVTPTKIALDKGRFVEIGATHYNHVSSA------ITQTGKVYMWG 318



 Score = 91.3 bits (225), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 74/287 (25%), Positives = 129/287 (44%), Gaps = 7/287 (2%)

Query: 117 TTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS-ASENHA 175
           ++G    ++  +  V++ GS+    LG G +    +   +I+      +V +   S  H 
Sbjct: 36  SSGNEAIVITQDDDVYALGSNCSSCLGVG-DAQSGLEPRKIDILCKKKIVDIGYGSGPHV 94

Query: 176 AFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRG 235
                +G +++ G N     G+  TN+ +    +   L G    +V  G + +  LT+ G
Sbjct: 95  LVCTDNGDLYSWGHNGYSQLGNGSTNQGLSPQLITTNLIGRKVVKVACGSHHSLALTLEG 154

Query: 236 HVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 295
            V   G N  GQ+G G T ++ TP+ +A       V +IA G +  +A+  NG VY +G 
Sbjct: 155 EVFAWGYNNCGQVGSGTTTNQATPRKVAACLGTRKVTEIACGQTSSMALLDNGEVYGWGY 214

Query: 296 GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGAL 355
             N  LG G   ++  P  +   ++  + VV++  G  H +AL   G VY WG    G L
Sbjct: 215 NGNGQLGVGNNVNQPNPCRVAALQQ--MIVVQIVCGYAHAMALTDEGSVYAWGANSYGQL 272

Query: 356 GHGDEIDKTLPEPLSSLKSHLAVQVCARKRK--TFVLVDTGSVYGFG 400
           G G++ +   P  ++  K    V++ A      +  +  TG VY +G
Sbjct: 273 GTGNKANLVTPTKIALDKGRF-VEIGATHYNHVSSAITQTGKVYMWG 318


>gi|363728661|ref|XP_416780.3| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC418578
           [Gallus gallus]
          Length = 1212

 Score =  108 bits (270), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 92/302 (30%), Positives = 141/302 (46%), Gaps = 15/302 (4%)

Query: 166 VQVSASENHAAFVLQSGQVFTCGDNS--SFCCGHRDTNRPIFRPRLVEALKGVPCKQVTA 223
           V +S  + H A V  +G+++  G N       G ++T R   +P  V+ALK    K    
Sbjct: 42  VHISCGDEHTAVVTGNGKLYMFGSNDWGQLGLGSKNTVR---KPTCVKALKPEKTKLAVC 98

Query: 224 GLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
           G N T   T +G+V+  G N+ GQLG GDT +R T   I+       + Q+AAG     A
Sbjct: 99  GRNHTLVYTEKGNVYAAGGNSEGQLGLGDTEERTTFHLISFFTNQHKIKQLAAGSYTSAA 158

Query: 284 VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 343
           VT +G ++ +G  S   +G  ++     P  +      G  V  +S G  H   +   G 
Sbjct: 159 VTEDGQLFVWGDNSEGQIGLADKTCVSVPCQVDV----GKPVSSISCGYYHSAFITGDGE 214

Query: 344 VYTWGKGYCGALGHGDEIDKT--LPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGW 401
           +YT+G+   G LG   E  K   +P+P+  +   +    C  +  T VL +TG VY FG 
Sbjct: 215 LYTFGEPENGKLGLLPEQLKNSRVPQPVLGIMEKVNKVACGGEH-TVVLTETG-VYTFGL 272

Query: 402 MGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQ 461
             +G LG         V  P+ +  LR+H +  ++ G  HT V+ + G +F FGD    +
Sbjct: 273 GQYGQLGHGTLLFKTSV--PKSVKHLRSHKIHNVTCGESHTAVIAENGLMFTFGDGRHGK 330

Query: 462 LG 463
           LG
Sbjct: 331 LG 332



 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 76/248 (30%), Positives = 123/248 (49%), Gaps = 16/248 (6%)

Query: 119 GRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVV-QVSASENHAA 176
           GR HTL+ +   +V++ G +  G LG G +T +  +F  I+F +  H + Q++A    +A
Sbjct: 99  GRNHTLVYTEKGNVYAAGGNSEGQLGLG-DTEERTTFHLISFFTNQHKIKQLAAGSYTSA 157

Query: 177 FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
            V + GQ+F  GDNS    G  D    +  P  V+   G P   ++ G   + F+T  G 
Sbjct: 158 AVTEDGQLFVWGDNSEGQIGLADKT-CVSVPCQVDV--GKPVSSISCGYYHSAFITGDGE 214

Query: 237 VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG---SVVQIAAGPSYMLAVTGNGVVYSF 293
           ++T G   +G+LG    L      S  P   +G    V ++A G  + + +T  GV Y+F
Sbjct: 215 LYTFGEPENGKLG---LLPEQLKNSRVPQPVLGIMEKVNKVACGGEHTVVLTETGV-YTF 270

Query: 294 GSGSNFCLGHGEQHDELQ-PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 352
           G G    LGHG    +   P++++  R   IH   V+ G+ H   +  +G ++T+G G  
Sbjct: 271 GLGQYGQLGHGTLLFKTSVPKSVKHLRSHKIH--NVTCGESHTAVIAENGLMFTFGDGRH 328

Query: 353 GALGHGDE 360
           G LG G+E
Sbjct: 329 GKLGLGEE 336



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 74/257 (28%), Positives = 124/257 (48%), Gaps = 27/257 (10%)

Query: 221 VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHG--DTLDRPT-PKSIAPLEEVGSVVQIAAG 277
           ++ G   T  +T  G ++  GSN  GQLG G  +T+ +PT  K++ P +   +V     G
Sbjct: 44  ISCGDEHTAVVTGNGKLYMFGSNDWGQLGLGSKNTVRKPTCVKALKPEKTKLAV----CG 99

Query: 278 PSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
            ++ L  T  G VY+ G  S   LG G+  +      I  F  +   + +++AG     A
Sbjct: 100 RNHTLVYTEKGNVYAAGGNSEGQLGLGDTEERTTFHLISFFTNQH-KIKQLAAGSYTSAA 158

Query: 338 LDSSGYVYTWGKGYCGALGHGDEIDKTLP------EPLSSLKSHLAVQVCARKRKTFVLV 391
           +   G ++ WG    G +G  D+   ++P      +P+SS+        C      F+  
Sbjct: 159 VTEDGQLFVWGDNSEGQIGLADKTCVSVPCQVDVGKPVSSIS-------CGYYHSAFITG 211

Query: 392 DTGSVYGFGWMGFGSLGF-PDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGR 450
           D G +Y FG    G LG  P++  + +V +P +L  +    V++++ G  HTVV+T+ G 
Sbjct: 212 D-GELYTFGEPENGKLGLLPEQLKNSRVPQP-VLGIM--EKVNKVACGGEHTVVLTETG- 266

Query: 451 LFGFGDNERAQLGHDTL 467
           ++ FG  +  QLGH TL
Sbjct: 267 VYTFGLGQYGQLGHGTL 283


>gi|88855032|ref|ZP_01129697.1| hypothetical protein A20C1_04101 [marine actinobacterium PHSC20C1]
 gi|88815560|gb|EAR25417.1| hypothetical protein A20C1_04101 [marine actinobacterium PHSC20C1]
          Length = 524

 Score =  108 bits (270), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 76/273 (27%), Positives = 132/273 (48%), Gaps = 10/273 (3%)

Query: 213 LKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV 272
           L GV   QV+AG+N +  +   G+++  G N+ GQLG+   L+   P  ++  + V +  
Sbjct: 46  LPGVVFTQVSAGINHSLAMGSDGNIYAWGYNSSGQLGNNSILNSSVPVLVSTPDGV-TFT 104

Query: 273 QIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFR-RKGIHVVRVSAG 331
           Q++AG  + LAV  +G  Y++G  ++  LG+G       P  +       G+ + +V AG
Sbjct: 105 QVSAGADHSLAVGSDGNAYAWGRNTDGRLGNGTSTGSSVPLLVSAGAVPSGVTISQVMAG 164

Query: 332 DEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAV---QVCARKRKTF 388
             H +A+ S+G +Y+WG    G LG G  +  ++P  +S+      V   QV A  R + 
Sbjct: 165 GFHSLAVGSNGDIYSWGYNRSGQLGDGTTLASSVPLKVSAGAVPAGVTFSQVSAGDRHSL 224

Query: 389 VLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDR 448
            +   G  Y +G    G LG    G   +   P ++ +      +Q+S G  H++ V   
Sbjct: 225 AIGSNGKTYAWGEARGGQLGI---GSISRTPAPALVSAPAGVSFTQVSAGDLHSLAVGSD 281

Query: 449 GRLFGFGDNERAQLGHDTLRGCLEPTEIFIQEM 481
           G+ + +G+N+  QLG+ T    L P  + +  M
Sbjct: 282 GKAYAWGNNDSGQLGNATTTSSLAP--VLVSPM 312



 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 100/372 (26%), Positives = 158/372 (42%), Gaps = 21/372 (5%)

Query: 115 QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
           Q++ G  H+L + S+ ++++ G +  G LG+       V    ++ P      QVSA  +
Sbjct: 53  QVSAGINHSLAMGSDGNIYAWGYNSSGQLGNNSILNSSVPV-LVSTPDGVTFTQVSAGAD 111

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEA---LKGVPCKQVTAGLNFTGF 230
           H+  V   G  +  G N+    G+  T+     P LV A     GV   QV AG    GF
Sbjct: 112 HSLAVGSDGNAYAWGRNTDGRLGN-GTSTGSSVPLLVSAGAVPSGVTISQVMAG----GF 166

Query: 231 LTI----RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV--QIAAGPSYMLAV 284
            ++     G +++ G N  GQLG G TL    P  ++       V   Q++AG  + LA+
Sbjct: 167 HSLAVGSNGDIYSWGYNRSGQLGDGTTLASSVPLKVSAGAVPAGVTFSQVSAGDRHSLAI 226

Query: 285 TGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
             NG  Y++G      LG G       P  +      G+   +VSAGD H +A+ S G  
Sbjct: 227 GSNGKTYAWGEARGGQLGIGSISRTPAPALVSA--PAGVSFTQVSAGDLHSLAVGSDGKA 284

Query: 345 YTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGF 404
           Y WG    G LG+        P  +S +      QV A    +  +   G+ Y +G    
Sbjct: 285 YAWGNNDSGQLGNATTTSSLAPVLVSPMGGLAVTQVSAGADHSLAIGADGNAYAWGLNVN 344

Query: 405 GSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 464
           G LG  +  ++   + P ++ +      ++I  G  H++        + +G N   QLG+
Sbjct: 345 GQLG--NNTITTSTV-PVMVTAPDGVTFTRIEAGGLHSLTAASDENTYTWGANSFGQLGN 401

Query: 465 DTLRGCLEPTEI 476
            T  G L P  I
Sbjct: 402 GTSDGSLVPVAI 413



 Score = 88.6 bits (218), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 72/259 (27%), Positives = 115/259 (44%), Gaps = 7/259 (2%)

Query: 115 QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSF--TRINFPSAAHVVQVSAS 171
           Q+  G +H+L + SN  ++S G +  G LG G      V    +    P+     QVSA 
Sbjct: 160 QVMAGGFHSLAVGSNGDIYSWGYNRSGQLGDGTTLASSVPLKVSAGAVPAGVTFSQVSAG 219

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
           + H+  +  +G+ +  G+      G    +R    P LV A  GV   QV+AG   +  +
Sbjct: 220 DRHSLAIGSNGKTYAWGEARGGQLGIGSISR-TPAPALVSAPAGVSFTQVSAGDLHSLAV 278

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
              G  +  G+N  GQLG+  T     P  ++P+  + +V Q++AG  + LA+  +G  Y
Sbjct: 279 GSDGKAYAWGNNDSGQLGNATTTSSLAPVLVSPMGGL-AVTQVSAGADHSLAIGADGNAY 337

Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 351
           ++G   N  LG+        P  +      G+   R+ AG  H +   S    YTWG   
Sbjct: 338 AWGLNVNGQLGNNTITTSTVP--VMVTAPDGVTFTRIEAGGLHSLTAASDENTYTWGANS 395

Query: 352 CGALGHGDEIDKTLPEPLS 370
            G LG+G      +P  +S
Sbjct: 396 FGQLGNGTSDGSLVPVAIS 414


>gi|296445910|ref|ZP_06887861.1| regulator of chromosome condensation RCC1 [Methylosinus
           trichosporium OB3b]
 gi|296256578|gb|EFH03654.1| regulator of chromosome condensation RCC1 [Methylosinus
           trichosporium OB3b]
          Length = 484

 Score =  108 bits (270), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 112/371 (30%), Positives = 154/371 (41%), Gaps = 18/371 (4%)

Query: 111 AGNMQITTGRYHTLLISNSSVFSC-GSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS 169
           AG   +  G YHT ++  +S   C G +  G LG G  T +          S   V+ + 
Sbjct: 79  AGQATLAGGSYHTCVLGAASDVQCWGDNSYGQLGDGTITDRYSPVAVSGLSSG--VLAIV 136

Query: 170 ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
           A  +H   +  +G V   G N     G   T      P  V+ L          GL+ T 
Sbjct: 137 AGAHHTCALTAAGAVACWGPNYFGMLGD-GTGVQRLTPVAVQGLSSGVVAIAAGGLH-TC 194

Query: 230 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 289
            LTI G V   GSN  GQLG G  LDR  P ++  L     VV IAAG  +  A+T  G 
Sbjct: 195 ALTIAGAVKCWGSNAKGQLGDGTKLDRYVPVAVQGLSS--GVVAIAAGAEHSCALTSVGA 252

Query: 290 VYSFGSGSNFCLGHGEQHDELQ---PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYT 346
           V  +GS     +G G     L    P A+    R    +V +SAG+ H  AL ++  V  
Sbjct: 253 VKCWGSNEAGAVGDGTSGYHLYRLVPVAVSGLSRD---IVAISAGNNHTCALTAARAVKC 309

Query: 347 WGKGYCGALGHGDEIDKTLPEPLSSLKSH-LAVQVCARKRKTFVLVDTGSVYGFGWMGFG 405
           WG    G LG G    + +P P+S L S  +A+   A  +    L   G V  +G   FG
Sbjct: 310 WGLNTYGELGDGTTTSRNIPVPVSGLSSGVVAISTGATSQFNCALKGGGGVLCWGRNHFG 369

Query: 406 SLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHD 465
            LG  D  V+D+     +    R   V  I+ G +HT +    G +  +G N   QLG  
Sbjct: 370 ELG--DLSVTDRSTPVAVAGHTR--DVDAIALGKFHTCISIGSGIVRCWGRNNAGQLGDG 425

Query: 466 TLRGCLEPTEI 476
           T+     P  +
Sbjct: 426 TIANRRSPAPV 436



 Score = 55.1 bits (131), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 69/262 (26%), Positives = 108/262 (41%), Gaps = 13/262 (4%)

Query: 110 SAGNMQITTGRYHTLLISNSSVFSC-GSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQV 168
           S+G + I  G +HT  ++ +   +C G +  G+LG G    +          S   VV +
Sbjct: 129 SSGVLAIVAGAHHTCALTAAGAVACWGPNYFGMLGDGTGVQRLTPVAVQGLSSG--VVAI 186

Query: 169 SASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEAL-KGVPCKQVTAGLNF 227
           +A   H   +  +G V   G N+    G   T    + P  V+ L  GV    + AG   
Sbjct: 187 AAGGLHTCALTIAGAVKCWGSNAKGQLGD-GTKLDRYVPVAVQGLSSGV--VAIAAGAEH 243

Query: 228 TGFLTIRGHVHTCGSNTHGQLGHGDT---LDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 284
           +  LT  G V   GSN  G +G G +   L R  P +++ L     +V I+AG ++  A+
Sbjct: 244 SCALTSVGAVKCWGSNEAGAVGDGTSGYHLYRLVPVAVSGLSR--DIVAISAGNNHTCAL 301

Query: 285 TGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           T    V  +G  +   LG G       P  +      G+  +   A  +   AL   G V
Sbjct: 302 TAARAVKCWGLNTYGELGDGTTTSRNIPVPVSGL-SSGVVAISTGATSQFNCALKGGGGV 360

Query: 345 YTWGKGYCGALGHGDEIDKTLP 366
             WG+ + G LG     D++ P
Sbjct: 361 LCWGRNHFGELGDLSVTDRSTP 382


>gi|167517927|ref|XP_001743304.1| hypothetical protein [Monosiga brevicollis MX1]
 gi|163778403|gb|EDQ92018.1| predicted protein [Monosiga brevicollis MX1]
          Length = 850

 Score =  108 bits (270), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 103/345 (29%), Positives = 162/345 (46%), Gaps = 30/345 (8%)

Query: 131 VFSCGSSLCGVLGHGPETTQCVSFTRIN-FPSAAHVVQVSASENHAAFVLQSGQVFTCG- 188
           VFS G++    LG+     Q V   +IN   S  +   ++  +     +   G++++CG 
Sbjct: 1   VFSWGNTRDAELGY--VANQPVESPQINTLLSRLNPTHIALGQRGTFVIDGEGRLWSCGS 58

Query: 189 ------DNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 242
                 D  SF  GH +++       LVE L+     QV+A  +    +T++G V++ GS
Sbjct: 59  HTRPQNDVKSFL-GHAESSLA-----LVEGLESERFIQVSATSHVLA-VTLQGEVYSWGS 111

Query: 243 NTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLG 302
           N++ QLG     +RP   +    EEV   VQ+ AG  +  AV+  G +Y++G G    LG
Sbjct: 112 NSYKQLGRDGVNNRPMKITALEGEEV---VQVCAGGHHSAAVSKAGNLYTWGRGGYGRLG 168

Query: 303 HGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEHVVALDSSGYVYTWGKGYCGALGHGDE 360
           HG   D   P  +  F  +GI VV V+ G  D H + +   G++Y++G G  G LGHG  
Sbjct: 169 HGTSDDVNVPTRVAAFP-EGIRVVHVACGLGDAHSMCVTEDGHIYSFGDGDFGKLGHGTN 227

Query: 361 IDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLR 420
             +  PE    +   +   VC       + + +G++Y +G      LG    G    + +
Sbjct: 228 DRRRQPE---RIDFDIVKVVCGSSTSAAISL-SGALYVWGGGRRYRLG---TGTEAVIWQ 280

Query: 421 PRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHD 465
           PR   +L  H V   +    H V VTDRG +F +G N+  QLG D
Sbjct: 281 PRTAHALNTHKVVDCALSSEHGVAVTDRGEVFVWGANDHGQLGAD 325



 Score = 80.1 bits (196), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 79/283 (27%), Positives = 121/283 (42%), Gaps = 20/283 (7%)

Query: 93  VLRFLQSVEHSSDIVE--TSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQ 150
           V  FL   E S  +VE   S   +Q++   +   +     V+S GS+    LG      +
Sbjct: 66  VKSFLGHAESSLALVEGLESERFIQVSATSHVLAVTLQGEVYSWGSNSYKQLGRDGVNNR 125

Query: 151 CVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGH---RDTNRPIFRP 207
            +  T +       VVQV A  +H+A V ++G ++T G       GH    D N P    
Sbjct: 126 PMKITALE---GEEVVQVCAGGHHSAAVSKAGNLYTWGRGGYGRLGHGTSDDVNVPT--- 179

Query: 208 RLVEALKGVPCKQVTAGLN--FTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL 265
           R+    +G+    V  GL    +  +T  GH+++ G    G+LGHG    R  P+ I   
Sbjct: 180 RVAAFPEGIRVVHVACGLGDAHSMCVTEDGHIYSFGDGDFGKLGHGTNDRRRQPERID-- 237

Query: 266 EEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHV 325
                +V++  G S   A++ +G +Y +G G  + LG G +    QPR           V
Sbjct: 238 ---FDIVKVVCGSSTSAAISLSGALYVWGGGRRYRLGTGTEAVIWQPRTAHALNTH--KV 292

Query: 326 VRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEP 368
           V  +   EH VA+   G V+ WG    G LG     +KT+  P
Sbjct: 293 VDCALSSEHGVAVTDRGEVFVWGANDHGQLGADAGSEKTIIAP 335



 Score = 39.7 bits (91), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 49/198 (24%), Positives = 81/198 (40%), Gaps = 28/198 (14%)

Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 349
           V+S+G+  +  LG+        P+      R  ++   ++ G      +D  G +++   
Sbjct: 1   VFSWGNTRDAELGYVANQPVESPQINTLLSR--LNPTHIALGQRGTFVIDGEGRLWS--- 55

Query: 350 GYCGA-----------LGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYG 398
             CG+           LGH  E    L E    L+S   +QV A      V +  G VY 
Sbjct: 56  --CGSHTRPQNDVKSFLGHA-ESSLALVE---GLESERFIQVSATSHVLAVTLQ-GEVYS 108

Query: 399 FGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNE 458
           +G   +  LG    GV++   RP  + +L    V Q+  G +H+  V+  G L+ +G   
Sbjct: 109 WGSNSYKQLG--RDGVNN---RPMKITALEGEEVVQVCAGGHHSAAVSKAGNLYTWGRGG 163

Query: 459 RAQLGHDTLRGCLEPTEI 476
             +LGH T      PT +
Sbjct: 164 YGRLGHGTSDDVNVPTRV 181


>gi|387541132|gb|AFJ71193.1| RCC1 and BTB domain-containing protein 2 [Macaca mulatta]
          Length = 551

 Score =  108 bits (269), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 80/275 (29%), Positives = 122/275 (44%), Gaps = 5/275 (1%)

Query: 128 NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS-ASENHAAFVLQSGQVFT 186
           N  +F  G++ CG LG G +    +   R++  S   +  +S  S  H       G+VFT
Sbjct: 64  NDEIFVLGTNCCGCLGLG-DVQSTIEPRRLDSLSGKKIASLSYGSGPHIVLATTEGEVFT 122

Query: 187 CGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHG 246
            G N+    G+  TN  +   ++   L      +V  G   +  LT  G V   G N  G
Sbjct: 123 WGHNAYSQLGNGTTNHGLVPCQISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSG 182

Query: 247 QLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ 306
           Q+G G T+++P P+ +    +   VV IA G    +AV   G VY +G   N  LG G  
Sbjct: 183 QVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGSS 242

Query: 307 HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP 366
            +  QP   +    +GI V RV+ G  H + L   G VY WG    G LG G++ +++ P
Sbjct: 243 GN--QPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYP 300

Query: 367 EPLSSLKSH-LAVQVCARKRKTFVLVDTGSVYGFG 400
            P++  K   + +  C     +      G VY +G
Sbjct: 301 TPVTMEKDRIIEIAACHSTHTSAAKTQGGHVYMWG 335



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 84/287 (29%), Positives = 136/287 (47%), Gaps = 15/287 (5%)

Query: 203 PIFRPRLVEALKGV--PCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPK 260
           PIF     E L+ +   C   +AG N   + T+   +   G+N  G LG GD      P+
Sbjct: 32  PIFSLCSEEELQLIRQACVFGSAG-NEVLYTTVNDEIFVLGTNCCGCLGLGDVQSTIEPR 90

Query: 261 SIAPL--EEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTF 318
            +  L  +++ S+    +GP  +LA T  G V+++G  +   LG+G  +  L P  I T 
Sbjct: 91  RLDSLSGKKIASL-SYGSGPHIVLATT-EGEVFTWGHNAYSQLGNGTTNHGLVPCQIST- 147

Query: 319 RRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLS-SLKSHLA 377
                 V+ V+ G  H + L S G V+ WG    G +G G  +++ +P  ++  L++ + 
Sbjct: 148 NLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVV 207

Query: 378 VQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIST 437
           V +   +     +VDTG VY +G+ G G LG    G      R   L  +R   V +++ 
Sbjct: 208 VTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGSSGNQPTPCRVAALQGIR---VQRVAC 264

Query: 438 GLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQEMEED 484
           G  HT+V+TD G+++ +G N   QLG         PT +    ME+D
Sbjct: 265 GYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPV---TMEKD 308



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 66/237 (27%), Positives = 109/237 (45%), Gaps = 3/237 (1%)

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL- 231
           N   +   + ++F  G N   C G  D    I  PR +++L G     ++ G      L 
Sbjct: 56  NEVLYTTVNDEIFVLGTNCCGCLGLGDVQSTI-EPRRLDSLSGKKIASLSYGSGPHIVLA 114

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
           T  G V T G N + QLG+G T     P  I+       V+++A G  + L +T +G V+
Sbjct: 115 TTEGEVFTWGHNAYSQLGNGTTNHGLVPCQISTNLSNKQVIEVACGSYHSLVLTSDGEVF 174

Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 351
           ++G  ++  +G G   ++  PR +    +  + VV ++ G    +A+  +G VY WG   
Sbjct: 175 AWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKV-VVTIACGQMCCMAVVDTGEVYVWGYNG 233

Query: 352 CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLG 408
            G LG G   ++  P  +++L+     +V      T VL D G VY +G   +G LG
Sbjct: 234 NGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLG 290


>gi|386813626|ref|ZP_10100850.1| conserved hypothetical protein [planctomycete KSU-1]
 gi|386403123|dbj|GAB63731.1| conserved hypothetical protein [planctomycete KSU-1]
          Length = 407

 Score =  108 bits (269), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 88/367 (23%), Positives = 161/367 (43%), Gaps = 21/367 (5%)

Query: 114 MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +Q++ G +H++ L S+ +V + G ++ G LG G  T + +    +      +V  ++   
Sbjct: 61  LQVSGGSFHSIALKSDGTVLTWGQNMHGQLGDGTNTDRKIP---VQVKDLNNVTAIAGGA 117

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            H+  +   G V+T G N +   G   T +   +P  V  LK +         N    L 
Sbjct: 118 WHSVALTSDGTVWTWGSNWAGQLGD-GTTKSRNKPVQVNNLKNITAIASKGLHNLA--LK 174

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
             G V T G N +GQLG G T DR TP     L    +++ IA G  + LA   +G +++
Sbjct: 175 SDGTVWTWGRNIYGQLGDGTTTDRNTPVQTRSLN---TIISIAGGGYHSLAQKADGTIWT 231

Query: 293 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 352
           +G      LG G   +   P  +   +     V  +  G +H + L ++G ++ WG    
Sbjct: 232 WGLNQYGQLGDGTITNRTIPVLVNGIK----DVSMIRCGGDHSIVLKNNGTIWIWGFNQH 287

Query: 353 GALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDR 412
           G LG     +++ P P+  LK+ + +        + +L   G+V+ +G    G LG    
Sbjct: 288 GQLGDRSTDNRSTPVPMGDLKNIMTID--GGGDHSLILKSDGTVWTWGNNENGQLGD--- 342

Query: 413 GVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLE 472
                + R   + +    +V+ I++G  H++ +   G ++ +G N   QLG  ++     
Sbjct: 343 --GTTMSRATPIQASTLSNVTAIASGEQHSIALKSDGTIWAWGSNRNGQLGDGSISNRST 400

Query: 473 PTEIFIQ 479
           P  + I+
Sbjct: 401 PVLVKIK 407



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 90/315 (28%), Positives = 150/315 (47%), Gaps = 19/315 (6%)

Query: 162 AAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVPCKQ 220
           A+ ++QVS    H+  +   G V T G N     G   +T+R I  P  V+ L  V    
Sbjct: 57  ASTILQVSGGSFHSIALKSDGTVLTWGQNMHGQLGDGTNTDRKI--PVQVKDLNNVTA-- 112

Query: 221 VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 280
           +  G   +  LT  G V T GSN  GQLG G T  R  P  +  L+   ++  IA+   +
Sbjct: 113 IAGGAWHSVALTSDGTVWTWGSNWAGQLGDGTTKSRNKPVQVNNLK---NITAIASKGLH 169

Query: 281 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 340
            LA+  +G V+++G      LG G   D   P  +QT  R    ++ ++ G  H +A  +
Sbjct: 170 NLALKSDGTVWTWGRNIYGQLGDGTTTDRNTP--VQT--RSLNTIISIAGGGYHSLAQKA 225

Query: 341 SGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 400
            G ++TWG    G LG G   ++T+P  ++ +K  +++  C     + VL + G+++ +G
Sbjct: 226 DGTIWTWGLNQYGQLGDGTITNRTIPVLVNGIKD-VSMIRCGGDH-SIVLKNNGTIWIWG 283

Query: 401 WMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERA 460
           +   G LG  DR  +D    P  +  L+  ++  I  G  H++++   G ++ +G+NE  
Sbjct: 284 FNQHGQLG--DRS-TDNRSTPVPMGDLK--NIMTIDGGGDHSLILKSDGTVWTWGNNENG 338

Query: 461 QLGHDTLRGCLEPTE 475
           QLG  T      P +
Sbjct: 339 QLGDGTTMSRATPIQ 353


>gi|431913810|gb|ELK15239.1| RCC1 and BTB domain-containing protein 1 [Pteropus alecto]
          Length = 531

 Score =  108 bits (269), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 78/255 (30%), Positives = 124/255 (48%), Gaps = 11/255 (4%)

Query: 230 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGSVVQIAAGPSYMLAVTGN 287
           ++T    V   G N    LG GD+     PK +  L  +++ S+    +GP  +L+ T +
Sbjct: 36  YVTDNDEVFVFGMNYSNCLGTGDSQSTLVPKKLEALCGKKIKSL-SYGSGPHVLLS-TED 93

Query: 288 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGI-HVVRVSAGDEHVVALDSSGYVYT 346
           GVVY++G      LG+G  +  + P  IQ      I  VV V+ G  H +AL + G V+ 
Sbjct: 94  GVVYAWGHNGYSQLGNGTTNQGIAP--IQVCTNLLIKQVVEVACGSHHSMALAADGEVFA 151

Query: 347 WGKGYCGALGHGDEIDKTLPEPLSS-LKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFG 405
           WG   CG +G G   ++  P  +++ L     V +   +  +  ++D G VYG+G+ G G
Sbjct: 152 WGYNNCGQVGSGSTANQPTPRKVTNCLHIKKVVGIACGQTSSMAVLDNGEVYGWGYNGNG 211

Query: 406 SLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHD 465
            LG  + G     L P  + +L +  V+QI  G  HT+ +TD G L+ +G N   QLG  
Sbjct: 212 QLGLGNNG---NQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTG 268

Query: 466 TLRGCLEPTEIFIQE 480
                L P  I +++
Sbjct: 269 NKNNLLNPVHIMVEK 283



 Score = 89.4 bits (220), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 71/252 (28%), Positives = 117/252 (46%), Gaps = 6/252 (2%)

Query: 171 SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
           S N A +V  + +VF  G N S C G  D+   +  P+ +EAL G   K ++ G      
Sbjct: 30  SANEALYVTDNDEVFVFGMNYSNCLGTGDSQSTLV-PKKLEALCGKKIKSLSYGSGPHVL 88

Query: 231 LTIR-GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 289
           L+   G V+  G N + QLG+G T     P  +     +  VV++A G  + +A+  +G 
Sbjct: 89  LSTEDGVVYAWGHNGYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGSHHSMALAADGE 148

Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 349
           V+++G  +   +G G   ++  PR +         VV ++ G    +A+  +G VY WG 
Sbjct: 149 VFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIK-KVVGIACGQTSSMAVLDNGEVYGWGY 207

Query: 350 GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGF 409
              G LG G+  ++  P  +++L S    Q+      T  L D G +Y +G   +G LG 
Sbjct: 208 NGNGQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLG- 266

Query: 410 PDRGVSDKVLRP 421
              G  + +L P
Sbjct: 267 --TGNKNNLLNP 276



 Score = 83.2 bits (204), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 73/278 (26%), Positives = 114/278 (41%), Gaps = 5/278 (1%)

Query: 125 LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS-ASENHAAFVLQSGQ 183
           +  N  VF  G +    LG G   +  V   ++       +  +S  S  H     + G 
Sbjct: 37  VTDNDEVFVFGMNYSNCLGTGDSQSTLVP-KKLEALCGKKIKSLSYGSGPHVLLSTEDGV 95

Query: 184 VFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 243
           V+  G N     G+  TN+ I   ++   L      +V  G + +  L   G V   G N
Sbjct: 96  VYAWGHNGYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYN 155

Query: 244 THGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH 303
             GQ+G G T ++PTP+ +     +  VV IA G +  +AV  NG VY +G   N  LG 
Sbjct: 156 NCGQVGSGSTANQPTPRKVTNCLHIKKVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGL 215

Query: 304 GEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK 363
           G   ++L P  +       + V ++  G  H +AL   G +Y WG    G LG G++ + 
Sbjct: 216 GNNGNQLTPVRVAALH--SVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGNKNNL 273

Query: 364 TLPEPLSSLKSHLA-VQVCARKRKTFVLVDTGSVYGFG 400
             P  +   K  +  +  C     +      G VY +G
Sbjct: 274 LNPVHIMVEKERVVEIAACHSAHTSAAKTQGGHVYMWG 311



 Score = 59.7 bits (143), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 56/184 (30%), Positives = 85/184 (46%), Gaps = 6/184 (3%)

Query: 114 MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +++  G +H++ L ++  VF+ G + CG +G G    Q       N      VV ++  +
Sbjct: 131 VEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKKVVGIACGQ 190

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
             +  VL +G+V+  G N +   G    N     P  V AL  V   Q+  G   T  LT
Sbjct: 191 TSSMAVLDNGEVYGWGYNGNGQLG-LGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALT 249

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY--MLAVTGNGVV 290
             G ++  G+NT+GQLG G+  +   P  I  + E   VV+IAA  S     A T  G V
Sbjct: 250 DEGLLYAWGANTYGQLGTGNKNNLLNPVHI--MVEKERVVEIAACHSAHTSAAKTQGGHV 307

Query: 291 YSFG 294
           Y +G
Sbjct: 308 YMWG 311


>gi|443704114|gb|ELU01326.1| hypothetical protein CAPTEDRAFT_215877 [Capitella teleta]
          Length = 627

 Score =  108 bits (269), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 79/270 (29%), Positives = 132/270 (48%), Gaps = 13/270 (4%)

Query: 184 VFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 243
           V+  G NSS       T+  I +P+LV     V  +Q+ AG   T  +   G V  CG  
Sbjct: 360 VYAWGSNSSHQLA-EGTSEKILQPKLVTNFPKV--QQLEAGQYCTFVIDNDGAVSACGKG 416

Query: 244 THGQLGHGDTLDRPTPKSIA--PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCL 301
           ++G+LG GD+ ++  PK ++      V  +        + LA+T  G ++S+G G    L
Sbjct: 417 SYGRLGLGDSSNQTAPKKLSFDATHLVKKISSSKGSDGHTLALTVEGALFSWGDGDYGKL 476

Query: 302 GHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEI 361
           GHG    +  P+ IQ     G  V  + AG  H  A+   G +YTWG+G  G LGHGD  
Sbjct: 477 GHGNISTQKYPKLIQG-PLAGKVVKCICAGYRHSAAVTEDGQLYTWGEGDFGRLGHGDNS 535

Query: 362 DKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRP 421
            + +P  +  + S++    C       V  D  +V+ F   G G LGF D   +++V RP
Sbjct: 536 GRNVPTLVKDI-SNVGQVACGSSHTIAVSQDGRTVWTF---GGGKLGFED---ANRVYRP 588

Query: 422 RILDSLRAHHVSQISTGLYHTVVVTDRGRL 451
           +++D+    ++ +++ G + ++ +T  G++
Sbjct: 589 KVVDAFAGLYIRKVACGSHSSLALTSSGQV 618



 Score = 88.2 bits (217), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 70/236 (29%), Positives = 120/236 (50%), Gaps = 16/236 (6%)

Query: 115 QITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSAS-- 171
           Q+  G+Y T +I N  +V +CG    G LG G  + Q  +  +++F +   V ++S+S  
Sbjct: 393 QLEAGQYCTFVIDNDGAVSACGKGSYGRLGLGDSSNQ-TAPKKLSFDATHLVKKISSSKG 451

Query: 172 -ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEA-LKGVPCKQVTAGLNFTG 229
            + H   +   G +F+ GD      GH + +   + P+L++  L G   K + AG   + 
Sbjct: 452 SDGHTLALTVEGALFSWGDGDYGKLGHGNISTQKY-PKLIQGPLAGKVVKCICAGYRHSA 510

Query: 230 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG- 288
            +T  G ++T G    G+LGHGD   R  P  +  +  VG   Q+A G S+ +AV+ +G 
Sbjct: 511 AVTEDGQLYTWGEGDFGRLGHGDNSGRNVPTLVKDISNVG---QVACGSSHTIAVSQDGR 567

Query: 289 VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
            V++FG G    LG  + +   +P+ +  F   G+++ +V+ G    +AL SSG V
Sbjct: 568 TVWTFGGGK---LGFEDANRVYRPKVVDAF--AGLYIRKVACGSHSSLALTSSGQV 618



 Score = 79.0 bits (193), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 58/191 (30%), Positives = 92/191 (48%), Gaps = 9/191 (4%)

Query: 289 VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 348
           VVY++GS S+  L  G     LQP+ +  F +    V ++ AG      +D+ G V   G
Sbjct: 359 VVYAWGSNSSHQLAEGTSEKILQPKLVTNFPK----VQQLEAGQYCTFVIDNDGAVSACG 414

Query: 349 KGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRK---TFVLVDTGSVYGFGWMGFG 405
           KG  G LG GD  ++T P+ LS   +HL  ++ + K     T  L   G+++ +G   +G
Sbjct: 415 KGSYGRLGLGDSSNQTAPKKLSFDATHLVKKISSSKGSDGHTLALTVEGALFSWGDGDYG 474

Query: 406 SLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHD 465
            LG  +  +S +     I   L    V  I  G  H+  VT+ G+L+ +G+ +  +LGH 
Sbjct: 475 KLGHGN--ISTQKYPKLIQGPLAGKVVKCICAGYRHSAAVTEDGQLYTWGEGDFGRLGHG 532

Query: 466 TLRGCLEPTEI 476
              G   PT +
Sbjct: 533 DNSGRNVPTLV 543


>gi|298710216|emb|CBJ26291.1| conserved unknown protein [Ectocarpus siliculosus]
          Length = 1089

 Score =  108 bits (269), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 101/341 (29%), Positives = 149/341 (43%), Gaps = 23/341 (6%)

Query: 129 SSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAA--HVVQVSASENHAAFVLQSGQV-- 184
           S V++ G +  G LG+G  T       R+ F  A    + +V     H   +   G V  
Sbjct: 8   SLVWAVGGNSKGQLGNGTPTQSSFLPCRVAFQLAPTQRIAEVFCGYEHTFALTSDGDVLG 67

Query: 185 FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNT 244
           F  G       G+ D++     P+ V  L G    ++ AGL  +  LT  G ++  G N 
Sbjct: 68  FGNGVKGQLGIGNTDSHS---NPQRVHLLSGKGVVKMAAGLEHSLALTESGDLYAFGDNL 124

Query: 245 HGQLG--HGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLG 302
            GQLG  H  T    TP+ + PL     + Q+A G  +   +T +G ++ FG+  +  LG
Sbjct: 125 SGQLGLGHNFTAKEQTPQKVPPLGRA-KITQLACGQDHTAVLTSSGELFMFGNNRDGALG 183

Query: 303 HGEQHDELQPRAIQTFRR----KGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 358
                +E  P      +     KG HVV++  G +H VAL ++G VY WG+   G LG G
Sbjct: 184 VAGHANEGPPIVASAPQLVTGLKGKHVVQIGCGLQHTVALTAAGGVYCWGENGRGQLGTG 243

Query: 359 DEIDKTLP----EPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGV 414
           D  ++  P    +PLS+ K    + V    + T  + D   VYGFG    G LG   RGV
Sbjct: 244 DTQNRYTPSLVCKPLSAFK---CIHVACGGQHTIAVTDCDDVYGFGSDRHGQLGLGRRGV 300

Query: 415 SDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFG 455
              V  P  +  L    V     G +HT++ T  G  +  G
Sbjct: 301 IVPV--PTRIVRLGGRRVKNCVGGAWHTIIGTVTGEQYIMG 339



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 76/241 (31%), Positives = 112/241 (46%), Gaps = 17/241 (7%)

Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP------LEEVGSVVQIAAGPSYMLAVTGN 287
           R  V   G N+ GQLG+G     PT  S  P      L     + ++  G  +  A+T +
Sbjct: 7   RSLVWAVGGNSKGQLGNG----TPTQSSFLPCRVAFQLAPTQRIAEVFCGYEHTFALTSD 62

Query: 288 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 347
           G V  FG+G    LG G       P+ +     KG  VV+++AG EH +AL  SG +Y +
Sbjct: 63  GDVLGFGNGVKGQLGIGNTDSHSNPQRVHLLSGKG--VVKMAAGLEHSLALTESGDLYAF 120

Query: 348 GKGYCG--ALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFG 405
           G    G   LGH     +  P+ +  L      Q+   +  T VL  +G ++ FG    G
Sbjct: 121 GDNLSGQLGLGHNFTAKEQTPQKVPPLGRAKITQLACGQDHTAVLTSSGELFMFGNNRDG 180

Query: 406 SLGFP---DRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQL 462
           +LG     + G       P+++  L+  HV QI  GL HTV +T  G ++ +G+N R QL
Sbjct: 181 ALGVAGHANEGPPIVASAPQLVTGLKGKHVVQIGCGLQHTVALTAAGGVYCWGENGRGQL 240

Query: 463 G 463
           G
Sbjct: 241 G 241



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 87/291 (29%), Positives = 131/291 (45%), Gaps = 17/291 (5%)

Query: 184 VFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT---AGLNFTGFLTIRGHVHTC 240
           V+  G NS    G+    +  F P  V A +  P +++     G   T  LT  G V   
Sbjct: 10  VWAVGGNSKGQLGNGTPTQSSFLPCRV-AFQLAPTQRIAEVFCGYEHTFALTSDGDVLGF 68

Query: 241 GSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG--SN 298
           G+   GQLG G+T     P+ +  L   G VV++AAG  + LA+T +G +Y+FG      
Sbjct: 69  GNGVKGQLGIGNTDSHSNPQRVHLLSGKG-VVKMAAGLEHSLALTESGDLYAFGDNLSGQ 127

Query: 299 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG-- 356
             LGH     E  P+ +    R    + +++ G +H   L SSG ++ +G    GALG  
Sbjct: 128 LGLGHNFTAKEQTPQKVPPLGR--AKITQLACGQDHTAVLTSSGELFMFGNNRDGALGVA 185

Query: 357 ----HGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDR 412
                G  I  + P+ ++ LK    VQ+    + T  L   G VY +G  G G LG  D 
Sbjct: 186 GHANEGPPIVASAPQLVTGLKGKHVVQIGCGLQHTVALTAAGGVYCWGENGRGQLGTGD- 244

Query: 413 GVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 463
              ++     +   L A     ++ G  HT+ VTD   ++GFG +   QLG
Sbjct: 245 -TQNRYTPSLVCKPLSAFKCIHVACGGQHTIAVTDCDDVYGFGSDRHGQLG 294



 Score = 85.9 bits (211), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 73/244 (29%), Positives = 112/244 (45%), Gaps = 8/244 (3%)

Query: 112 GNMQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPE-TTQCVSFTRINFPSAAHVVQVS 169
           G +++  G  H+L ++ S  +++ G +L G LG G   T +  +  ++     A + Q++
Sbjct: 97  GVVKMAAGLEHSLALTESGDLYAFGDNLSGQLGLGHNFTAKEQTPQKVPPLGRAKITQLA 156

Query: 170 ASENHAAFVLQSGQVFTCGDNSSFC---CGHRDTNRPIFR--PRLVEALKGVPCKQVTAG 224
             ++H A +  SG++F  G+N        GH +   PI    P+LV  LKG    Q+  G
Sbjct: 157 CGQDHTAVLTSSGELFMFGNNRDGALGVAGHANEGPPIVASAPQLVTGLKGKHVVQIGCG 216

Query: 225 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 284
           L  T  LT  G V+  G N  GQLG GDT +R TP  +         + +A G  + +AV
Sbjct: 217 LQHTVALTAAGGVYCWGENGRGQLGTGDTQNRYTPSLVCKPLSAFKCIHVACGGQHTIAV 276

Query: 285 TGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           T    VY FGS  +  LG G +   + P   +  R  G  V     G  H +    +G  
Sbjct: 277 TDCDDVYGFGSDRHGQLGLG-RRGVIVPVPTRIVRLGGRRVKNCVGGAWHTIIGTVTGEQ 335

Query: 345 YTWG 348
           Y  G
Sbjct: 336 YIMG 339


>gi|291406745|ref|XP_002719686.1| PREDICTED: NIMA-related kinase 8-like [Oryctolagus cuniculus]
          Length = 978

 Score =  108 bits (269), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 84/275 (30%), Positives = 127/275 (46%), Gaps = 21/275 (7%)

Query: 207 PRLVEALK-GVPCKQVTAGLNFTGFLTIRGHVHTC-----GSNTHGQLGHGDTLDRPTPK 260
           P+ ++ +K G   +QV AG      +T+   ++T      G+  HGQLGHGD      PK
Sbjct: 359 PQKLDVIKSGCSARQVCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDKASYRQPK 418

Query: 261 SIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGE--QHDELQPRAIQTF 318
            +  L+   ++ Q++ G  + + VT  G +Y+FGS    C+G  +    + L+P  +  F
Sbjct: 419 HVEKLQG-KAIRQVSCGDDFTICVTDEGQLYAFGSDYYGCMGMDKIAGPEVLEPMQLNFF 477

Query: 319 RRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAV 378
              G  V +VS GD HVV L  +  VY+WG G  G LG   E D   P+ +   K+ + V
Sbjct: 478 L--GNPVEQVSCGDNHVVVLTRNKEVYSWGCGEYGRLGLDSEEDYYTPQKVDVPKALIIV 535

Query: 379 QVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD--RGVSDKVLRPRI--------LDSLR 428
            V      TF+L  +G V   G   F  LG      G+ +      +           L 
Sbjct: 536 AVQCGCDGTFLLTQSGKVLACGLNEFNKLGLNQCMSGIINHEAYHEVPYTTSFTLAKQLS 595

Query: 429 AHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 463
            + +  I+ G  HT  + +RGRL  FG N+  QLG
Sbjct: 596 FYKIRTIAPGKTHTAAIDERGRLLTFGCNKCGQLG 630



 Score = 72.4 bits (176), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 82/375 (21%), Positives = 147/375 (39%), Gaps = 28/375 (7%)

Query: 98  QSVEHSSDIVETSAGNMQITTGRYHTLLIS-NSSVFSC-----GSSLCGVLGHGPETTQC 151
           +S     D++++     Q+  G  H  +++    +++      G+ L G LGHG + +  
Sbjct: 356 KSTPQKLDVIKSGCSARQVCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDKASY- 414

Query: 152 VSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRP-IFRPRLV 210
                +       + QVS  ++    V   GQ++  G +   C G      P +  P  +
Sbjct: 415 RQPKHVEKLQGKAIRQVSCGDDFTICVTDEGQLYAFGSDYYGCMGMDKIAGPEVLEPMQL 474

Query: 211 EALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSI-APLEEVG 269
               G P +QV+ G N    LT    V++ G   +G+LG     D  TP+ +  P   + 
Sbjct: 475 NFFLGNPVEQVSCGDNHVVVLTRNKEVYSWGCGEYGRLGLDSEEDYYTPQKVDVPKALII 534

Query: 270 SVVQIAAGPSYMLAVTGNGVVYSFGS----GSNFCL----GHGEQHDELQPRAIQTFRRK 321
             VQ     +++L  +G  +          G N C+     H   H+     +    ++ 
Sbjct: 535 VAVQCGCDGTFLLTQSGKVLACGLNEFNKLGLNQCMSGIINHEAYHEVPYTTSFTLAKQL 594

Query: 322 GIHVVR-VSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLS-SLKSHLAVQ 379
             + +R ++ G  H  A+D  G + T+G   CG LG G+   +     L   L     ++
Sbjct: 595 SFYKIRTIAPGKTHTAAIDERGRLLTFGCNKCGQLGVGNYKKRLGINLLGGPLGGKQVIR 654

Query: 380 VCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD------RGVSDKVLRPRILDSLRAHHVS 433
           V      T    D   ++ +G  G G L            +     RP I  SL  HHV 
Sbjct: 655 VSCGDEFTIAATDDNHIFAWGNGGNGRLAMTPTERPHGSDICTSWPRP-IFGSL--HHVP 711

Query: 434 QISTGLYHTVVVTDR 448
            +S   +HT+++ ++
Sbjct: 712 DLSCRGWHTILIVEK 726



 Score = 69.7 bits (169), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 46/164 (28%), Positives = 73/164 (44%), Gaps = 6/164 (3%)

Query: 320 RKGIHVVRVSAGDEHVVALDSSGYVYTW-----GKGYCGALGHGDEIDKTLPEPLSSLKS 374
           + G    +V AG+ H   +     +YTW     G    G LGHGD+     P+ +  L+ 
Sbjct: 366 KSGCSARQVCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDKASYRQPKHVEKLQG 425

Query: 375 HLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQ 434
               QV      T  + D G +Y FG   +G +G  D+    +VL P  L+    + V Q
Sbjct: 426 KAIRQVSCGDDFTICVTDEGQLYAFGSDYYGCMGM-DKIAGPEVLEPMQLNFFLGNPVEQ 484

Query: 435 ISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFI 478
           +S G  H VV+T    ++ +G  E  +LG D+      P ++ +
Sbjct: 485 VSCGDNHVVVLTRNKEVYSWGCGEYGRLGLDSEEDYYTPQKVDV 528



 Score = 66.6 bits (161), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 96/381 (25%), Positives = 155/381 (40%), Gaps = 47/381 (12%)

Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 179
           R  T+  +  +V +  +S   V G G  T Q +   +    S     QV A   H A V 
Sbjct: 330 RSSTVTEAPIAVVTSRTSEVYVWGGGKSTPQKLDVIK----SGCSARQVCAGNTHFAVVT 385

Query: 180 QSGQVFTC-----GDNSSFCCGHRDTNRPIFR-PRLVEALKGVPCKQVTAGLNFTGFLTI 233
              +++T      G       GH D  +  +R P+ VE L+G   +QV+ G +FT  +T 
Sbjct: 386 VEKELYTWVNMQGGTKLHGQLGHGD--KASYRQPKHVEKLQGKAIRQVSCGDDFTICVTD 443

Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPT-PKSIAPLEEV----GSVVQIAAGPSYMLAVTGNG 288
            G ++  GS+ +G +G    +D+   P+ + P++        V Q++ G ++++ +T N 
Sbjct: 444 EGQLYAFGSDYYGCMG----MDKIAGPEVLEPMQLNFFLGNPVEQVSCGDNHVVVLTRNK 499

Query: 289 VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 348
            VYS+G G    LG   + D   P+ +     K + +V V  G +    L  SG V   G
Sbjct: 500 EVYSWGCGEYGRLGLDSEEDYYTPQKVDV--PKALIIVAVQCGCDGTFLLTQSGKVLACG 557

Query: 349 KGYCGALGHGD------------EIDKTLPEPLSSLKSHLAVQVCAR-KRKTFVLVDTGS 395
                 LG               E+  T    L+   S   ++  A  K  T  + + G 
Sbjct: 558 LNEFNKLGLNQCMSGIINHEAYHEVPYTTSFTLAKQLSFYKIRTIAPGKTHTAAIDERGR 617

Query: 396 VYGFGWMGFGSLGFPDRGVSDKVLRPRIL-DSLRAHHVSQISTGLYHTVVVTDRGRLFGF 454
           +  FG    G LG    G   K L   +L   L    V ++S G   T+  TD   +F +
Sbjct: 618 LLTFGCNKCGQLGV---GNYKKRLGINLLGGPLGGKQVIRVSCGDEFTIAATDDNHIFAW 674

Query: 455 GDNERAQLGHDTLRGCLEPTE 475
           G+    +L        + PTE
Sbjct: 675 GNGGNGRLA-------MTPTE 688



 Score = 50.1 bits (118), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 42/146 (28%), Positives = 65/146 (44%), Gaps = 17/146 (11%)

Query: 336 VALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHL-AVQVCARKRKTFVLVDTG 394
           V    +  VY WG G            K+ P+ L  +KS   A QVCA      V+    
Sbjct: 341 VVTSRTSEVYVWGGG------------KSTPQKLDVIKSGCSARQVCAGNTHFAVVTVEK 388

Query: 395 SVYGFGWMGFGSLGFPDRGVSDKV--LRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLF 452
            +Y +  M  G+      G  DK    +P+ ++ L+   + Q+S G   T+ VTD G+L+
Sbjct: 389 ELYTWVNMQGGTKLHGQLGHGDKASYRQPKHVEKLQGKAIRQVSCGDDFTICVTDEGQLY 448

Query: 453 GFGDNERAQLGHDTLRG--CLEPTEI 476
            FG +    +G D + G   LEP ++
Sbjct: 449 AFGSDYYGCMGMDKIAGPEVLEPMQL 474


>gi|260814706|ref|XP_002602055.1| hypothetical protein BRAFLDRAFT_228262 [Branchiostoma floridae]
 gi|229287360|gb|EEN58067.1| hypothetical protein BRAFLDRAFT_228262 [Branchiostoma floridae]
          Length = 833

 Score =  108 bits (269), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 85/317 (26%), Positives = 144/317 (45%), Gaps = 22/317 (6%)

Query: 160 PSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCK 219
           PS   +   S  EN    V ++ +V+  G NSS         + I +P+L  A      +
Sbjct: 356 PSPVPIDDSSTGEN-GNMVTENSEVYVWGSNSSHQLAEGSQEK-ILQPKLSPAFANA--Q 411

Query: 220 QVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPS 279
            + AG   T  +   G V  CG  ++G+LG GD+ ++ T K +   +    + +I++   
Sbjct: 412 TIEAGQYCTFVVYSDGTVRACGKGSYGRLGLGDSNNQTTLKKLN-FDHRYVIRKISSSKG 470

Query: 280 ---YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVV 336
              + LA+T +G V+S+G G    LGHG    +  P+ IQ    +G  V  +SAG  H  
Sbjct: 471 SDGHTLALTADGEVFSWGDGDYGKLGHGNSSTQKYPKQIQG-ALQGKVVKSISAGYRHSA 529

Query: 337 ALDSSGYVYTWGKGYCGALGHGDEIDKT---------LPEPLSSLKSHLAVQVCARKRKT 387
           A+   G ++TWG+G  G LGHGD   K           P+ + +L      +VC   + +
Sbjct: 530 AVTEDGELFTWGEGDYGRLGHGDSNRKLGHGDTNRVYKPKVIEALVGLYIRKVCCGSQSS 589

Query: 388 FVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTD 447
             L  TG ++ +G       G P+       LRP++++ L    +  ++ G  H + +T 
Sbjct: 590 LALTSTGQLFAWGCGACLGCGSPE----STALRPKLVEELANTRIVDVACGDSHCLALTH 645

Query: 448 RGRLFGFGDNERAQLGH 464
              ++ +G+N   Q G 
Sbjct: 646 DNEVYAWGNNAMGQCGQ 662



 Score = 89.4 bits (220), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 94/350 (26%), Positives = 155/350 (44%), Gaps = 29/350 (8%)

Query: 117 TTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 176
           +TG    ++  NS V+  GS+    L  G +  + +   +++ P+ A+   + A +    
Sbjct: 365 STGENGNMVTENSEVYVWGSNSSHQLAEGSQ--EKILQPKLS-PAFANAQTIEAGQYCTF 421

Query: 177 FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF---LTI 233
            V   G V  CG  S    G  D+N      +L    + V  +++++     G    LT 
Sbjct: 422 VVYSDGTVRACGKGSYGRLGLGDSNNQTTLKKLNFDHRYV-IRKISSSKGSDGHTLALTA 480

Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
            G V + G   +G+LGHG++  +  PK I    +   V  I+AG  +  AVT +G ++++
Sbjct: 481 DGEVFSWGDGDYGKLGHGNSSTQKYPKQIQGALQGKVVKSISAGYRHSAAVTEDGELFTW 540

Query: 294 GSG---------SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           G G         SN  LGHG+ +   +P+ I+     G+++ +V  G +  +AL S+G +
Sbjct: 541 GEGDYGRLGHGDSNRKLGHGDTNRVYKPKVIEAL--VGLYIRKVCCGSQSSLALTSTGQL 598

Query: 345 YTWGKGYCGALGHGDEIDKTL-PEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 403
           + WG G C  LG G      L P+ +  L +   V V         L     VY +G   
Sbjct: 599 FAWGCGAC--LGCGSPESTALRPKLVEELANTRIVDVACGDSHCLALTHDNEVYAWGNNA 656

Query: 404 FGSLGFPDRGVSDK-VLRPRILDSLRAHHVSQISTGLYH----TVVVTDR 448
            G  G   +G S   + +P+ +  L    V QIS G  H    T + TDR
Sbjct: 657 MGQCG---QGHSQSPITKPKKVVGLDGVTVHQISAGTSHSLAWTALPTDR 703


>gi|410910330|ref|XP_003968643.1| PREDICTED: RCC1 and BTB domain-containing protein 2-like [Takifugu
           rubripes]
          Length = 527

 Score =  108 bits (269), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 78/275 (28%), Positives = 130/275 (47%), Gaps = 5/275 (1%)

Query: 128 NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS-ASENHAAFVLQSGQVFT 186
           N  VF+ G++  G LG G +    +   RI+      +V +S  +  H A     G+VF+
Sbjct: 40  NDEVFALGTNCSGCLGLG-DLQSTIEPRRIDVLCGKKIVSLSYGTGPHVAIATADGEVFS 98

Query: 187 CGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHG 246
            G N     G+  +   +    +   L G    +V  G + T  LT  G V   G N  G
Sbjct: 99  WGHNGYSQLGNGTSTHGLTPALVSTNLLGKRVIEVACGSHHTIALTTDGEVFAWGYNNSG 158

Query: 247 QLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ 306
           Q+G G T ++PTP+ ++   +   VV IA G    +AV  +G +Y +G   N  LG G  
Sbjct: 159 QVGSGSTANQPTPRRVSSCLQNKVVVNIACGQLCSMAVLDSGEIYGWGYNCNGQLGLGNN 218

Query: 307 HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP 366
            ++  P  I     +G++V++V+ G  H +AL   G+VY+WG    G LG G++ ++ +P
Sbjct: 219 GNQQTPCRIAAL--QGVNVIQVACGYAHTIALTDEGFVYSWGANSYGQLGTGNKCNQAVP 276

Query: 367 EPLSSLKSHLA-VQVCARKRKTFVLVDTGSVYGFG 400
             +++ K  ++ V  C     +     +G V  +G
Sbjct: 277 TLINTEKERMSEVAACHTSHTSAAKTQSGQVLMWG 311



 Score =  102 bits (255), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 70/237 (29%), Positives = 118/237 (49%), Gaps = 9/237 (3%)

Query: 230 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGSVVQIAAGPSYMLAVTGN 287
           ++T+   V   G+N  G LG GD      P+ I  L  +++ S+     GP   +A T +
Sbjct: 36  YVTVNDEVFALGTNCSGCLGLGDLQSTIEPRRIDVLCGKKIVSL-SYGTGPHVAIA-TAD 93

Query: 288 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 347
           G V+S+G      LG+G     L P  + T    G  V+ V+ G  H +AL + G V+ W
Sbjct: 94  GEVFSWGHNGYSQLGNGTSTHGLTPALVST-NLLGKRVIEVACGSHHTIALTTDGEVFAW 152

Query: 348 GKGYCGALGHGDEIDKTLPEPLSS-LKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGS 406
           G    G +G G   ++  P  +SS L++ + V +   +  +  ++D+G +YG+G+   G 
Sbjct: 153 GYNNSGQVGSGSTANQPTPRRVSSCLQNKVVVNIACGQLCSMAVLDSGEIYGWGYNCNGQ 212

Query: 407 LGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 463
           LG  + G      R   + +L+  +V Q++ G  HT+ +TD G ++ +G N   QLG
Sbjct: 213 LGLGNNGNQQTPCR---IAALQGVNVIQVACGYAHTIALTDEGFVYSWGANSYGQLG 266



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 67/240 (27%), Positives = 116/240 (48%), Gaps = 3/240 (1%)

Query: 170 ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN-FT 228
           ++ N A +V  + +VF  G N S C G  D    I  PR ++ L G     ++ G     
Sbjct: 29  SAANEALYVTVNDEVFALGTNCSGCLGLGDLQSTI-EPRRIDVLCGKKIVSLSYGTGPHV 87

Query: 229 GFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG 288
              T  G V + G N + QLG+G +    TP  ++       V+++A G  + +A+T +G
Sbjct: 88  AIATADGEVFSWGHNGYSQLGNGTSTHGLTPALVSTNLLGKRVIEVACGSHHTIALTTDG 147

Query: 289 VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 348
            V+++G  ++  +G G   ++  PR + +  +  + VV ++ G    +A+  SG +Y WG
Sbjct: 148 EVFAWGYNNSGQVGSGSTANQPTPRRVSSCLQNKV-VVNIACGQLCSMAVLDSGEIYGWG 206

Query: 349 KGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLG 408
               G LG G+  ++  P  +++L+    +QV      T  L D G VY +G   +G LG
Sbjct: 207 YNCNGQLGLGNNGNQQTPCRIAALQGVNVIQVACGYAHTIALTDEGFVYSWGANSYGQLG 266



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 66/233 (28%), Positives = 107/233 (45%), Gaps = 4/233 (1%)

Query: 118 TGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAF 177
           TG +  +  ++  VFS G +    LG+G  T                V++V+   +H   
Sbjct: 83  TGPHVAIATADGEVFSWGHNGYSQLGNGTSTHGLTPALVSTNLLGKRVIEVACGSHHTIA 142

Query: 178 VLQSGQVFTCGDNSSFCCGHRDT-NRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
           +   G+VF  G N+S   G   T N+P  R R+   L+      +  G   +  +   G 
Sbjct: 143 LTTDGEVFAWGYNNSGQVGSGSTANQPTPR-RVSSCLQNKVVVNIACGQLCSMAVLDSGE 201

Query: 237 VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 296
           ++  G N +GQLG G+  ++ TP  IA L+ V +V+Q+A G ++ +A+T  G VYS+G+ 
Sbjct: 202 IYGWGYNCNGQLGLGNNGNQQTPCRIAALQGV-NVIQVACGYAHTIALTDEGFVYSWGAN 260

Query: 297 SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 349
           S   LG G + ++  P  I T + +   V           A   SG V  WG+
Sbjct: 261 SYGQLGTGNKCNQAVPTLINTEKERMSEVAACHTSHTS-AAKTQSGQVLMWGQ 312


>gi|301791658|ref|XP_002930797.1| PREDICTED: RCC1 and BTB domain-containing protein 1-like, partial
           [Ailuropoda melanoleuca]
          Length = 348

 Score =  108 bits (269), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 78/255 (30%), Positives = 123/255 (48%), Gaps = 11/255 (4%)

Query: 230 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGSVVQIAAGPSYMLAVTGN 287
           ++T    V   G N    LG GD      PK +  L  +++ S+    +GP  +L+ T +
Sbjct: 36  YVTDNDEVFVFGLNYSNCLGTGDNQSTLVPKKLEALCGKKIKSL-SYGSGPHVLLS-TED 93

Query: 288 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGI-HVVRVSAGDEHVVALDSSGYVYT 346
           GVVY++G      LG+G  +  + P  IQ      I  VV V+ G  H +AL + G V+ 
Sbjct: 94  GVVYAWGHNGYSQLGNGTTNQGIAP--IQVCTNLLIKQVVEVACGSHHSMALAADGEVFA 151

Query: 347 WGKGYCGALGHGDEIDKTLPEPLSS-LKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFG 405
           WG   CG +G G   ++  P  +++ L     V +   +  +  ++D G VYG+G+ G G
Sbjct: 152 WGYNNCGQVGSGSTTNQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNG 211

Query: 406 SLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHD 465
            LG  + G     L P  + +L +  V+QI  G  HT+ +TD G L+ +G N   QLG  
Sbjct: 212 QLGLGNNG---NQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTG 268

Query: 466 TLRGCLEPTEIFIQE 480
                L P  I +++
Sbjct: 269 NKNNLLSPAHIMVEK 283



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 73/255 (28%), Positives = 119/255 (46%), Gaps = 12/255 (4%)

Query: 171 SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
           S N A +V  + +VF  G N S C G  D N+    P+ +EAL G   K ++ G      
Sbjct: 30  SANEALYVTDNDEVFVFGLNYSNCLGTGD-NQSTLVPKKLEALCGKKIKSLSYGSGPHVL 88

Query: 231 LTIR-GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 289
           L+   G V+  G N + QLG+G T     P  +     +  VV++A G  + +A+  +G 
Sbjct: 89  LSTEDGVVYAWGHNGYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGSHHSMALAADGE 148

Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAIQT---FRRKGIHVVRVSAGDEHVVALDSSGYVYT 346
           V+++G  +   +G G   ++  PR +      +R    VV ++ G    +A+  +G VY 
Sbjct: 149 VFAWGYNNCGQVGSGSTTNQPTPRKVTNCLHIKR----VVGIACGQTSSMAVLDNGEVYG 204

Query: 347 WGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGS 406
           WG    G LG G+  ++  P  +++L S    Q+      T  L D G +Y +G   +G 
Sbjct: 205 WGYNGNGQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQ 264

Query: 407 LGFPDRGVSDKVLRP 421
           LG    G  + +L P
Sbjct: 265 LG---TGNKNNLLSP 276



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 63/228 (27%), Positives = 97/228 (42%), Gaps = 3/228 (1%)

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
           H     + G V+  G N     G+  TN+ I   ++   L      +V  G + +  L  
Sbjct: 86  HVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGSHHSMALAA 145

Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
            G V   G N  GQ+G G T ++PTP+ +     +  VV IA G +  +AV  NG VY +
Sbjct: 146 DGEVFAWGYNNCGQVGSGSTTNQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGW 205

Query: 294 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 353
           G   N  LG G   ++L P  +       + V ++  G  H +AL   G +Y WG    G
Sbjct: 206 GYNGNGQLGLGNNGNQLTPVRVAALHS--VCVNQIVCGYAHTLALTDEGLLYAWGANTYG 263

Query: 354 ALGHGDEIDKTLPEPLSSLKSHLA-VQVCARKRKTFVLVDTGSVYGFG 400
            LG G++ +   P  +   K  +  +  C     +      G VY +G
Sbjct: 264 QLGTGNKNNLLSPAHIMVEKERVVEIAACHSAHTSAAKTQGGHVYMWG 311



 Score = 61.6 bits (148), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 57/184 (30%), Positives = 87/184 (47%), Gaps = 6/184 (3%)

Query: 114 MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +++  G +H++ L ++  VF+ G + CG +G G  T Q       N      VV ++  +
Sbjct: 131 VEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTTNQPTPRKVTNCLHIKRVVGIACGQ 190

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
             +  VL +G+V+  G N +   G    N     P  V AL  V   Q+  G   T  LT
Sbjct: 191 TSSMAVLDNGEVYGWGYNGNGQLG-LGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALT 249

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY--MLAVTGNGVV 290
             G ++  G+NT+GQLG G+  +  +P  I   +E   VV+IAA  S     A T  G V
Sbjct: 250 DEGLLYAWGANTYGQLGTGNKNNLLSPAHIMVEKE--RVVEIAACHSAHTSAAKTQGGHV 307

Query: 291 YSFG 294
           Y +G
Sbjct: 308 YMWG 311


>gi|297738141|emb|CBI27342.3| unnamed protein product [Vitis vinifera]
          Length = 925

 Score =  108 bits (269), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 87/294 (29%), Positives = 135/294 (45%), Gaps = 26/294 (8%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V ++S    HAA V + G+VF  G+ S    GH+  N  +  P++VE+L GV  K V+ G
Sbjct: 257 VREISLGGKHAALVTKHGEVFCWGEGSGGRLGHK-VNMDMGNPKIVESLTGVLVKSVSCG 315

Query: 225 LNFTGFLTIRGHVHTCGSNTHG--QLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 282
              T  LT  G ++T G N  G   +G      +  P  ++      S+  +A G  +M 
Sbjct: 316 EYQTCALTHSGELYTWGDNGSGIDLVGERRKRSQWIPSRLSGPLNGTSISNVACGEWHMA 375

Query: 283 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL---- 338
            V+ +G ++++G G+   LGHG+     QP+ +++    G+ V   + G  H  A+    
Sbjct: 376 IVSTSGQLFTYGDGTFGVLGHGKLESISQPKEVESL--SGLWVKAAACGPWHTAAIVEVR 433

Query: 339 -------DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 391
                     G ++TWG G  G LGHGD+  K LP  ++ L  H  VQV   +  T  L 
Sbjct: 434 ADRLKFNTKGGKLFTWGDGDKGRLGHGDQERKLLPTCVAQLVDHDFVQVSCGRMLTVGLT 493

Query: 392 DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVV 445
             G+VY  G +G       DR        P +++ LR   V  I+ G   T  +
Sbjct: 494 CLGTVYTMGRLG----DTEDRN------SPAVVEELRYRQVESIACGSGFTAAI 537



 Score = 77.4 bits (189), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 53/187 (28%), Positives = 87/187 (46%), Gaps = 8/187 (4%)

Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 349
           VY FG+       +G Q D L P+ +++     + V  +S G +H   +   G V+ WG+
Sbjct: 230 VYRFGNQ------NGMQSDALLPKLLESTTM--LDVREISLGGKHAALVTKHGEVFCWGE 281

Query: 350 GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGF 409
           G  G LGH   +D   P+ + SL   L   V   + +T  L  +G +Y +G  G G    
Sbjct: 282 GSGGRLGHKVNMDMGNPKIVESLTGVLVKSVSCGEYQTCALTHSGELYTWGDNGSGIDLV 341

Query: 410 PDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG 469
            +R    + +  R+   L    +S ++ G +H  +V+  G+LF +GD     LGH  L  
Sbjct: 342 GERRKRSQWIPSRLSGPLNGTSISNVACGEWHMAIVSTSGQLFTYGDGTFGVLGHGKLES 401

Query: 470 CLEPTEI 476
             +P E+
Sbjct: 402 ISQPKEV 408



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 63/218 (28%), Positives = 101/218 (46%), Gaps = 19/218 (8%)

Query: 271 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 330
           V +I+ G  +   VT +G V+ +G GS   LGH    D   P+ +++    G+ V  VS 
Sbjct: 257 VREISLGGKHAALVTKHGEVFCWGEGSGGRLGHKVNMDMGNPKIVESL--TGVLVKSVSC 314

Query: 331 GDEHVVALDSSGYVYTWGKGYCGA--LGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTF 388
           G+    AL  SG +YTWG    G   +G   +  + +P  LS   +  ++   A      
Sbjct: 315 GEYQTCALTHSGELYTWGDNGSGIDLVGERRKRSQWIPSRLSGPLNGTSISNVACGEWHM 374

Query: 389 VLVDT-GSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVV-- 445
            +V T G ++ +G   FG LG    G  + + +P+ ++SL    V   + G +HT  +  
Sbjct: 375 AIVSTSGQLFTYGDGTFGVLG---HGKLESISQPKEVESLSGLWVKAAACGPWHTAAIVE 431

Query: 446 --TDR-------GRLFGFGDNERAQLGHDTLRGCLEPT 474
              DR       G+LF +GD ++ +LGH      L PT
Sbjct: 432 VRADRLKFNTKGGKLFTWGDGDKGRLGHGDQERKLLPT 469



 Score = 72.8 bits (177), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 68/262 (25%), Positives = 117/262 (44%), Gaps = 18/262 (6%)

Query: 207 PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 266
           P+L+E+   +  ++++ G      +T  G V   G  + G+LGH   +D   PK +  L 
Sbjct: 246 PKLLESTTMLDVREISLGGKHAALVTKHGEVFCWGEGSGGRLGHKVNMDMGNPKIVESLT 305

Query: 267 EVGSVVQIAAGPSYMLAVTGNGVVYSFG-SGSNFCL-GHGEQHDELQPRAIQTFRRKGIH 324
            V  V  ++ G     A+T +G +Y++G +GS   L G   +  +  P  + +    G  
Sbjct: 306 GV-LVKSVSCGEYQTCALTHSGELYTWGDNGSGIDLVGERRKRSQWIPSRL-SGPLNGTS 363

Query: 325 VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKS---------- 374
           +  V+ G+ H+  + +SG ++T+G G  G LGHG     + P+ + SL            
Sbjct: 364 ISNVACGEWHMAIVSTSGQLFTYGDGTFGVLGHGKLESISQPKEVESLSGLWVKAAACGP 423

Query: 375 -HLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVS 433
            H A  V  R  +       G ++ +G    G LG  D+   ++ L P  +  L  H   
Sbjct: 424 WHTAAIVEVRADRLKFNTKGGKLFTWGDGDKGRLGHGDQ---ERKLLPTCVAQLVDHDFV 480

Query: 434 QISTGLYHTVVVTDRGRLFGFG 455
           Q+S G   TV +T  G ++  G
Sbjct: 481 QVSCGRMLTVGLTCLGTVYTMG 502



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 53/182 (29%), Positives = 77/182 (42%), Gaps = 24/182 (13%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPS-----A 162
           +  G +H  ++S S  +F+ G    GVLGHG       P+  + +S   +   +      
Sbjct: 367 VACGEWHMAIVSTSGQLFTYGDGTFGVLGHGKLESISQPKEVESLSGLWVKAAACGPWHT 426

Query: 163 AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 222
           A +V+V A  +   F  + G++FT GD      GH D  R +  P  V  L      QV+
Sbjct: 427 AAIVEVRA--DRLKFNTKGGKLFTWGDGDKGRLGHGDQERKLL-PTCVAQLVDHDFVQVS 483

Query: 223 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 282
            G   T  LT  G V+T G         GDT DR +P  +  L     V  IA G  +  
Sbjct: 484 CGRMLTVGLTCLGTVYTMGR-------LGDTEDRNSPAVVEEL-RYRQVESIACGSGFTA 535

Query: 283 AV 284
           A+
Sbjct: 536 AI 537


>gi|444911573|ref|ZP_21231747.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
 gi|444717927|gb|ELW58746.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
          Length = 708

 Score =  108 bits (269), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 114/403 (28%), Positives = 170/403 (42%), Gaps = 66/403 (16%)

Query: 122 HTLLI-SNSSVFSCGSSLCGVLGHGPE--TTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
           H+L + S+  +++ G +L G LG+  E  +++ V   R+        V VSA  NH+  V
Sbjct: 171 HSLAVRSDGILWAWGDNLYGQLGNRGEFNSSEPVQVLRVTGG-----VTVSAGANHSLAV 225

Query: 179 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVH 238
              G V+  GDNS    G   T   +  P  V  ++G     + AG N +  +   G V 
Sbjct: 226 SADGTVWAWGDNSHGQLGIARTTPLLSIPGRVPEVRG--SVAMAAGDNHSLAVRDDGTVW 283

Query: 239 TCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS--- 295
             GSN HGQLG+G  +D   P  +  LE VG+V   AAG ++ LAV  +G V+++GS   
Sbjct: 284 AWGSNGHGQLGNGFMVDNSEPGRVPGLEGVGAV---AAGSNHSLAVRDDGTVWAWGSNVE 340

Query: 296 ---------------------------------------GSNFCLGH---GEQHDELQPR 313
                                                  GS +  GH   GE  D     
Sbjct: 341 GQRGDGTTGQLSAPTRVPGVSGVVGVAANVFHSLAVSADGSAWAWGHNSHGELGDGSTRN 400

Query: 314 AIQTFRRKGI-HVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSL 372
           +    R  G+  VV V+AG  H +AL + G V  WG    G LG G     ++P  +  L
Sbjct: 401 SPAPVRVDGLKEVVAVAAGSSHSLALLADGTVLAWGDNTFGQLGDGTRASHSVPAQVRGL 460

Query: 373 KSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHV 432
           +    V V A    +  L+  G+V+ +G+   G LG    G +     P  +  L    V
Sbjct: 461 RG--VVAVAAGSSHSLALLADGTVWTWGYNLNGQLG---DGTTTYRYEPVAVKGLEG--V 513

Query: 433 SQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTE 475
             ++ G  H++ V   G  + +G+N + QLG  TL     P E
Sbjct: 514 VAVAAGGNHSLAVRSDGTAWAWGENVKGQLGDGTLTSRPAPVE 556



 Score = 98.2 bits (243), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 105/409 (25%), Positives = 165/409 (40%), Gaps = 59/409 (14%)

Query: 112 GNMQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSA 170
           G++ +  G  H+L +  + +V++ GS+  G LG+G          R+  P    V  V+A
Sbjct: 262 GSVAMAAGDNHSLAVRDDGTVWAWGSNGHGQLGNGFMVDNS-EPGRV--PGLEGVGAVAA 318

Query: 171 SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
             NH+  V   G V+  G N     G   T +     R+           V A +  +  
Sbjct: 319 GSNHSLAVRDDGTVWAWGSNVEGQRGDGTTGQLSAPTRVPGVSG---VVGVAANVFHSLA 375

Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 290
           ++  G     G N+HG+LG G T + P P  +  L+EV   V +AAG S+ LA+  +G V
Sbjct: 376 VSADGSAWAWGHNSHGELGDGSTRNSPAPVRVDGLKEV---VAVAAGSSHSLALLADGTV 432

Query: 291 YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKG 350
            ++G  +   LG G +     P  ++  R     VV V+AG  H +AL + G V+TWG  
Sbjct: 433 LAWGDNTFGQLGDGTRASHSVPAQVRGLR----GVVAVAAGSSHSLALLADGTVWTWGYN 488

Query: 351 YCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGW--------- 401
             G LG G    +  P  +  L+    V V A    +  +   G+ + +G          
Sbjct: 489 LNGQLGDGTTTYRYEPVAVKGLEG--VVAVAAGGNHSLAVRSDGTAWAWGENVKGQLGDG 546

Query: 402 -------------------------MGFGSLGFP---------DRGVSDKVLRPRILDSL 427
                                    +  GS GFP           G      RP  +   
Sbjct: 547 TLTSRPAPVEVKAAAKAVAAAQGLSLAVGSDGFPWAWGNNSSGQLGDGSTTSRPMPMRVQ 606

Query: 428 RAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 476
            A  V  ++ G  H++ ++  G ++ +G N R QLG  TL   L PT +
Sbjct: 607 GAGEVVAVAAGNGHSLALSPEGGVWAWGQNARGQLGEGTLDRRLAPTRV 655



 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 99/346 (28%), Positives = 149/346 (43%), Gaps = 25/346 (7%)

Query: 121 YHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 179
           +H+L +S + S ++ G +  G LG G  T    +  R++      VV V+A  +H+  +L
Sbjct: 371 FHSLAVSADGSAWAWGHNSHGELGDG-STRNSPAPVRVD--GLKEVVAVAAGSSHSLALL 427

Query: 180 QSGQVFTCGDNSSFCCGHRDTNRPIFR-PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVH 238
             G V   GDN+    G  D  R     P  V  L+GV    V AG + +  L   G V 
Sbjct: 428 ADGTVLAWGDNTFGQLG--DGTRASHSVPAQVRGLRGVVA--VAAGSSHSLALLADGTVW 483

Query: 239 TCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
           T G N +GQLG G T  R  P ++  LE    VV +AAG ++ LAV  +G  +++G    
Sbjct: 484 TWGYNLNGQLGDGTTTYRYEPVAVKGLE---GVVAVAAGGNHSLAVRSDGTAWAWGENVK 540

Query: 299 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 358
             LG G       P  ++   +       +S      +A+ S G+ + WG    G LG G
Sbjct: 541 GQLGDGTLTSRPAPVEVKAAAKAVAAAQGLS------LAVGSDGFPWAWGNNSSGQLGDG 594

Query: 359 DEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKV 418
               +  P P+    +   V V A    +  L   G V+ +G    G LG    G  D+ 
Sbjct: 595 STTSR--PMPMRVQGAGEVVAVAAGNGHSLALSPEGGVWAWGQNARGQLG---EGTLDRR 649

Query: 419 LRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 464
           L P  +  L              ++ V D G ++ +GDN   QLG+
Sbjct: 650 LAPTRVQGLSGVVAVAAGGAF--SLAVRDDGSVWSWGDNAFGQLGN 693



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 102/372 (27%), Positives = 165/372 (44%), Gaps = 30/372 (8%)

Query: 111 AGNMQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS 169
           +G + +  G YH+L +S + +V++ G++  G LG G    +      +    ++ VV V+
Sbjct: 110 SGVVAVAAGGYHSLAVSADGTVWAWGNNSSGQLGDGSFDNRA---EPVRVRGSSGVVAVA 166

Query: 170 ASENHAAFVLQSGQVFTCGDNSSFCCGHR---DTNRPIFRPRLVEALKGVPCKQVTAGLN 226
           A   H+  V   G ++  GDN     G+R   +++ P      V+ L+      V+AG N
Sbjct: 167 AGGAHSLAVRSDGILWAWGDNLYGQLGNRGEFNSSEP------VQVLRVTGGVTVSAGAN 220

Query: 227 FTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP--LEEVGSVVQIAAGPSYMLAV 284
            +  ++  G V   G N+HGQLG    + R TP    P  + EV   V +AAG ++ LAV
Sbjct: 221 HSLAVSADGTVWAWGDNSHGQLG----IARTTPLLSIPGRVPEVRGSVAMAAGDNHSLAV 276

Query: 285 TGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
             +G V+++GS  +  LG+G   D  +P  +      G     V+AG  H +A+   G V
Sbjct: 277 RDDGTVWAWGSNGHGQLGNGFMVDNSEPGRVPGLEGVGA----VAAGSNHSLAVRDDGTV 332

Query: 345 YTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGF 404
           + WG    G    GD     L  P         V V A    +  +   GS + +G    
Sbjct: 333 WAWGSNVEGQ--RGDGTTGQLSAPTRVPGVSGVVGVAANVFHSLAVSADGSAWAWGHNSH 390

Query: 405 GSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 464
           G LG    G +     P  +D L+   V  ++ G  H++ +   G +  +GDN   QLG 
Sbjct: 391 GELG---DGSTRNSPAPVRVDGLK--EVVAVAAGSSHSLALLADGTVLAWGDNTFGQLGD 445

Query: 465 DTLRGCLEPTEI 476
            T      P ++
Sbjct: 446 GTRASHSVPAQV 457



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 89/296 (30%), Positives = 131/296 (44%), Gaps = 18/296 (6%)

Query: 114 MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           + +  G  H+L L+++ +V + G +  G LG G   +  V            VV V+A  
Sbjct: 414 VAVAAGSSHSLALLADGTVLAWGDNTFGQLGDGTRASHSVPAQVRGLRG---VVAVAAGS 470

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
           +H+  +L  G V+T G N +   G   T    + P  V+ L+GV    V AG N +  + 
Sbjct: 471 SHSLALLADGTVWTWGYNLNGQLGDGTTTYR-YEPVAVKGLEGVVA--VAAGGNHSLAVR 527

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
             G     G N  GQLG G    RP     AP+E   +   +AA     LAV  +G  ++
Sbjct: 528 SDGTAWAWGENVKGQLGDGTLTSRP-----APVEVKAAAKAVAAAQGLSLAVGSDGFPWA 582

Query: 293 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 352
           +G+ S+  LG G       P  +Q        VV V+AG+ H +AL   G V+ WG+   
Sbjct: 583 WGNNSSGQLGDGSTTSRPMPMRVQGAG----EVVAVAAGNGHSLALSPEGGVWAWGQNAR 638

Query: 353 GALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLG 408
           G LG G    +  P  +  L     V V A    +  + D GSV+ +G   FG LG
Sbjct: 639 GQLGEGTLDRRLAPTRVQGLSG--VVAVAAGGAFSLAVRDDGSVWSWGDNAFGQLG 692



 Score = 85.5 bits (210), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 91/316 (28%), Positives = 145/316 (45%), Gaps = 26/316 (8%)

Query: 166 VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFR-PRLVEALKGVPCKQVTAG 224
            +++   +H+  V Q G V+  G NS    G  D    + R P  V  L GV    V AG
Sbjct: 13  ARIATGGSHSLSVHQDGTVWAVGGNSVGQLG--DGTTSLRRVPVRVLGLSGVVT--VAAG 68

Query: 225 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 284
              +  +   G V   G+N+ GQLG G   +R  P  +  L     VV +AAG  + LAV
Sbjct: 69  GGHSLAVHSDGTVWAWGNNSSGQLGDGSFDNRAEPVRVRGLS---GVVAVAAGGYHSLAV 125

Query: 285 TGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           + +G V+++G+ S+  LG G   +  +P  +    R    VV V+AG  H +A+ S G +
Sbjct: 126 SADGTVWAWGNNSSGQLGDGSFDNRAEPVRV----RGSSGVVAVAAGGAHSLAVRSDGIL 181

Query: 345 YTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGF 404
           + WG    G LG+  E + +  EP+  L+    V V A    +  +   G+V+ +G    
Sbjct: 182 WAWGDNLYGQLGNRGEFNSS--EPVQVLRVTGGVTVSAGANHSLAVSADGTVWAWGDNSH 239

Query: 405 GSLGF----PDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERA 460
           G LG     P   +  +V  P +  S+       ++ G  H++ V D G ++ +G N   
Sbjct: 240 GQLGIARTTPLLSIPGRV--PEVRGSV------AMAAGDNHSLAVRDDGTVWAWGSNGHG 291

Query: 461 QLGHDTLRGCLEPTEI 476
           QLG+  +    EP  +
Sbjct: 292 QLGNGFMVDNSEPGRV 307



 Score = 76.3 bits (186), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 72/255 (28%), Positives = 110/255 (43%), Gaps = 16/255 (6%)

Query: 112 GNMQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSA 170
           G + +  G  H+L L+++ +V++ G +L G LG G   T    +  +       VV V+A
Sbjct: 462 GVVAVAAGSSHSLALLADGTVWTWGYNLNGQLGDG---TTTYRYEPVAVKGLEGVVAVAA 518

Query: 171 SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
             NH+  V   G  +  G+N     G         RP  VE            GL+    
Sbjct: 519 GGNHSLAVRSDGTAWAWGEN---VKGQLGDGTLTSRPAPVEVKAAAKAVAAAQGLSLA-- 573

Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 290
           +   G     G+N+ GQLG G T  RP P  +   +  G VV +AAG  + LA++  G V
Sbjct: 574 VGSDGFPWAWGNNSSGQLGDGSTTSRPMPMRV---QGAGEVVAVAAGNGHSLALSPEGGV 630

Query: 291 YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKG 350
           +++G  +   LG G     L P  +Q         V V+AG    +A+   G V++WG  
Sbjct: 631 WAWGQNARGQLGEGTLDRRLAPTRVQGLSGV----VAVAAGGAFSLAVRDDGSVWSWGDN 686

Query: 351 YCGALGHGDEIDKTL 365
             G LG+   +  T 
Sbjct: 687 AFGQLGNAPPVYATF 701


>gi|390341372|ref|XP_794518.3| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like
           [Strongylocentrotus purpuratus]
          Length = 657

 Score =  108 bits (269), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 80/282 (28%), Positives = 138/282 (48%), Gaps = 9/282 (3%)

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
           ++  V ++ +VF  G NSS       +   I  P++  A+     +Q+ AG   T  ++ 
Sbjct: 367 NSLVVSENSEVFVWGSNSSHQLA-EGSQEKILLPKM--AISFAESQQIEAGQYCTFVISS 423

Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPS-YMLAVTGNGVVYS 292
            G V  CG  ++G+LG GD+ ++   K +     + + +  + G   + LA+T  G V+S
Sbjct: 424 DGSVRACGKGSYGRLGLGDSNNQTQLKKLNFDNSIITRISSSKGSDGHTLALTSEGQVFS 483

Query: 293 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 352
           +G G    LGHG    +  P+ I      G  VV +SAG  H   +   G +YTWG+G  
Sbjct: 484 WGDGDYGKLGHGNTLTQKYPKVILGVLM-GKVVVCISAGYRHSACVTDDGQLYTWGEGDY 542

Query: 353 GALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDR 412
           G LGHGD   + +P  +  + S++   VC       V  D+ +V+ FG    G LG  D 
Sbjct: 543 GRLGHGDSNSRNVPTLVKDV-SNVGKVVCGSSHTIAVSQDSRTVWSFGGGDNGKLGHGD- 600

Query: 413 GVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 454
             ++++ +P+I++SL    + ++  G   ++ +T  G+L  F
Sbjct: 601 --TNRIYKPKIIESLIGLFIKKVGCGSQSSLALTSTGQLCTF 640



 Score = 82.8 bits (203), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 84/284 (29%), Positives = 131/284 (46%), Gaps = 12/284 (4%)

Query: 120 RYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
           + ++L++S NS VF  GS+    L  G +    +    I+F   A   Q+ A + +  FV
Sbjct: 365 KPNSLVVSENSEVFVWGSNSSHQLAEGSQEKILLPKMAISF---AESQQIEAGQ-YCTFV 420

Query: 179 LQS-GQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN-FTGFLTIRGH 236
           + S G V  CG  S    G  D+N      +L      +     + G +  T  LT  G 
Sbjct: 421 ISSDGSVRACGKGSYGRLGLGDSNNQTQLKKLNFDNSIITRISSSKGSDGHTLALTSEGQ 480

Query: 237 VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 296
           V + G   +G+LGHG+TL +  PK I  +     VV I+AG  +   VT +G +Y++G G
Sbjct: 481 VFSWGDGDYGKLGHGNTLTQKYPKVILGVLMGKVVVCISAGYRHSACVTDDGQLYTWGEG 540

Query: 297 SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL-DSSGYVYTWGKGYCGAL 355
               LGHG+ +     R + T  +   +V +V  G  H +A+   S  V+++G G  G L
Sbjct: 541 DYGRLGHGDSNS----RNVPTLVKDVSNVGKVVCGSSHTIAVSQDSRTVWSFGGGDNGKL 596

Query: 356 GHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGF 399
           GHGD      P+ + SL      +V    + +  L  TG +  F
Sbjct: 597 GHGDTNRIYKPKIIESLIGLFIKKVGCGSQSSLALTSTGQLCTF 640



 Score = 65.1 bits (157), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 56/187 (29%), Positives = 86/187 (45%), Gaps = 12/187 (6%)

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 341
           L V+ N  V+ +GS S+  L  G Q   L P+   +F        ++ AG      + S 
Sbjct: 369 LVVSENSEVFVWGSNSSHQLAEGSQEKILLPKMAISFAESQ----QIEAGQYCTFVISSD 424

Query: 342 GYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRK---TFVLVDTGSVYG 398
           G V   GKG  G LG GD  ++T  + L+   + +  ++ + K     T  L   G V+ 
Sbjct: 425 GSVRACGKGSYGRLGLGDSNNQTQLKKLN-FDNSIITRISSSKGSDGHTLALTSEGQVFS 483

Query: 399 FGWMGFGSLGFPDRGVSDKVLRPR-ILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDN 457
           +G   +G LG    G +     P+ IL  L    V  IS G  H+  VTD G+L+ +G+ 
Sbjct: 484 WGDGDYGKLG---HGNTLTQKYPKVILGVLMGKVVVCISAGYRHSACVTDDGQLYTWGEG 540

Query: 458 ERAQLGH 464
           +  +LGH
Sbjct: 541 DYGRLGH 547


>gi|351712501|gb|EHB15420.1| Serine/threonine-protein kinase Nek9 [Heterocephalus glaber]
          Length = 712

 Score =  108 bits (269), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 83/273 (30%), Positives = 127/273 (46%), Gaps = 19/273 (6%)

Query: 207 PRLVEALK-GVPCKQVTAGLNFTGFLTIRGHVHTC-----GSNTHGQLGHGDTLDRPTPK 260
           P+ ++ +K G    QV AG+     +T+   ++T      G+  HGQLGHGD      PK
Sbjct: 283 PQKLDVIKSGCSSWQVCAGITHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDKASYRQPK 342

Query: 261 SIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGE--QHDELQPRAIQTF 318
            +  L+   ++ Q++ G  + + VT  G +Y+FGS    C+G  +    + L+P  +  F
Sbjct: 343 HVEKLQG-KAIRQVSCGEDFTVCVTDEGQLYAFGSDYYGCIGVDKIAGSEVLEPMQLNFF 401

Query: 319 RRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAV 378
               +   +VS GD HVV L  +  VY+WG G  G LG   E D   P+ +   K+ + V
Sbjct: 402 LSNPVE--QVSCGDNHVVVLTRNKEVYSWGCGEHGRLGLDSEEDYYTPQRVDVPKALIIV 459

Query: 379 QVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD--RGVSDKVLRPRILDS------LRAH 430
            V      TF+L  +G V   G   F  LG      G+ +      +  S      L  +
Sbjct: 460 AVQCGSDGTFLLTQSGKVLACGLNEFNKLGLNQCMSGIINHEAYHEVPTSFTLAKQLSFY 519

Query: 431 HVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 463
            +  I+ G  HT  + +RGRL  FG N+  QLG
Sbjct: 520 KIRTIAPGKTHTAAIDERGRLLTFGCNKCGQLG 552



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 82/373 (21%), Positives = 148/373 (39%), Gaps = 26/373 (6%)

Query: 98  QSVEHSSDIVETSAGNMQITTGRYHTLLIS-NSSVFSC-----GSSLCGVLGHGPETTQC 151
           +S     D++++   + Q+  G  H  +++    +++      G+ L G LGHG + +  
Sbjct: 280 KSTPQKLDVIKSGCSSWQVCAGITHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDKASY- 338

Query: 152 VSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCG-HRDTNRPIFRPRLV 210
                +       + QVS  E+    V   GQ++  G +   C G  +     +  P  +
Sbjct: 339 RQPKHVEKLQGKAIRQVSCGEDFTVCVTDEGQLYAFGSDYYGCIGVDKIAGSEVLEPMQL 398

Query: 211 EALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSI-APLEEVG 269
                 P +QV+ G N    LT    V++ G   HG+LG     D  TP+ +  P   + 
Sbjct: 399 NFFLSNPVEQVSCGDNHVVVLTRNKEVYSWGCGEHGRLGLDSEEDYYTPQRVDVPKALII 458

Query: 270 SVVQIAAGPSYMLAVTGNGVVYSFGS----GSNFCLGHGEQHDELQ--PRAIQTFRRKGI 323
             VQ  +  +++L  +G  +          G N C+     H+     P +    ++   
Sbjct: 459 VAVQCGSDGTFLLTQSGKVLACGLNEFNKLGLNQCMSGIINHEAYHEVPTSFTLAKQLSF 518

Query: 324 HVVR-VSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLS-SLKSHLAVQVC 381
           + +R ++ G  H  A+D  G + T+G   CG LG G+   +     L   L     ++V 
Sbjct: 519 YKIRTIAPGKTHTAAIDERGRLLTFGCNKCGQLGVGNYKKRLGINLLGGPLGGKQVIRVS 578

Query: 382 ARKRKTFVLVDTGSVYGFGWMGFGSLGFPD------RGVSDKVLRPRILDSLRAHHVSQI 435
                T    D   ++ +G  G G L            +     RP I  SL  HHV  +
Sbjct: 579 CGDEFTIAATDDNHIFAWGNGGNGRLAMTPTERPHGSDICTSWPRP-IFGSL--HHVPDL 635

Query: 436 STGLYHTVVVTDR 448
           S   +HT+++ ++
Sbjct: 636 SCRGWHTILIVEK 648



 Score = 66.6 bits (161), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 46/162 (28%), Positives = 72/162 (44%), Gaps = 6/162 (3%)

Query: 320 RKGIHVVRVSAGDEHVVALDSSGYVYTW-----GKGYCGALGHGDEIDKTLPEPLSSLKS 374
           + G    +V AG  H   +     +YTW     G    G LGHGD+     P+ +  L+ 
Sbjct: 290 KSGCSSWQVCAGITHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDKASYRQPKHVEKLQG 349

Query: 375 HLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQ 434
               QV   +  T  + D G +Y FG   +G +G  D+    +VL P  L+   ++ V Q
Sbjct: 350 KAIRQVSCGEDFTVCVTDEGQLYAFGSDYYGCIGV-DKIAGSEVLEPMQLNFFLSNPVEQ 408

Query: 435 ISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 476
           +S G  H VV+T    ++ +G  E  +LG D+      P  +
Sbjct: 409 VSCGDNHVVVLTRNKEVYSWGCGEHGRLGLDSEEDYYTPQRV 450



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 49/174 (28%), Positives = 74/174 (42%), Gaps = 21/174 (12%)

Query: 308 DELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPE 367
           DEL  R +   RR+   V          V    +  VY WG G            K+ P+
Sbjct: 241 DELLDRPLLRKRRRSSTVTEAPIA----VVTSRTSEVYVWGGG------------KSTPQ 284

Query: 368 PLSSLKSHLA-VQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKV--LRPRIL 424
            L  +KS  +  QVCA      V+     +Y +  M  G+      G  DK    +P+ +
Sbjct: 285 KLDVIKSGCSSWQVCAGITHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDKASYRQPKHV 344

Query: 425 DSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG--CLEPTEI 476
           + L+   + Q+S G   TV VTD G+L+ FG +    +G D + G   LEP ++
Sbjct: 345 EKLQGKAIRQVSCGEDFTVCVTDEGQLYAFGSDYYGCIGVDKIAGSEVLEPMQL 398


>gi|402901988|ref|XP_003913913.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 2
           [Papio anubis]
 gi|355754693|gb|EHH58594.1| hypothetical protein EGM_08474 [Macaca fascicularis]
          Length = 556

 Score =  107 bits (268), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 80/275 (29%), Positives = 122/275 (44%), Gaps = 5/275 (1%)

Query: 128 NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS-ASENHAAFVLQSGQVFT 186
           N  +F  G++ CG LG G +    +   R++  S   +  +S  S  H       G+VFT
Sbjct: 69  NDEIFVLGTNCCGCLGLG-DVQSTIEPRRLDSLSGKKIASLSYGSGPHIVLATTEGEVFT 127

Query: 187 CGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHG 246
            G N+    G+  TN  +   ++   L      +V  G   +  LT  G V   G N  G
Sbjct: 128 WGHNAYSQLGNGTTNHGLVPCQISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSG 187

Query: 247 QLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ 306
           Q+G G T+++P P+ +    +   VV IA G    +AV   G VY +G   N  LG G  
Sbjct: 188 QVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGSS 247

Query: 307 HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP 366
            +  QP   +    +GI V RV+ G  H + L   G VY WG    G LG G++ +++ P
Sbjct: 248 GN--QPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYP 305

Query: 367 EPLSSLKSH-LAVQVCARKRKTFVLVDTGSVYGFG 400
            P++  K   + +  C     +      G VY +G
Sbjct: 306 TPVTVEKDRIIEIAACHSTHTSAAKTQGGHVYMWG 340



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 81/283 (28%), Positives = 135/283 (47%), Gaps = 12/283 (4%)

Query: 203 PIFRPRLVEALKGV--PCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPK 260
           PIF     E L+ +   C   +AG N   + T+   +   G+N  G LG GD      P+
Sbjct: 37  PIFSLCSEEELQLIRQACVFGSAG-NEVLYTTVNDEIFVLGTNCCGCLGLGDVQSTIEPR 95

Query: 261 SIAPL--EEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTF 318
            +  L  +++ S+    +GP  +LA T  G V+++G  +   LG+G  +  L P  I T 
Sbjct: 96  RLDSLSGKKIASL-SYGSGPHIVLATT-EGEVFTWGHNAYSQLGNGTTNHGLVPCQIST- 152

Query: 319 RRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLS-SLKSHLA 377
                 V+ V+ G  H + L S G V+ WG    G +G G  +++ +P  ++  L++ + 
Sbjct: 153 NLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVV 212

Query: 378 VQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIST 437
           V +   +     +VDTG VY +G+ G G LG    G      R   L  +R   V +++ 
Sbjct: 213 VTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGSSGNQPTPCRVAALQGIR---VQRVAC 269

Query: 438 GLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQE 480
           G  HT+V+TD G+++ +G N   QLG         PT + +++
Sbjct: 270 GYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPVTVEK 312



 Score = 86.7 bits (213), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 66/237 (27%), Positives = 109/237 (45%), Gaps = 3/237 (1%)

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL- 231
           N   +   + ++F  G N   C G  D    I  PR +++L G     ++ G      L 
Sbjct: 61  NEVLYTTVNDEIFVLGTNCCGCLGLGDVQSTI-EPRRLDSLSGKKIASLSYGSGPHIVLA 119

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
           T  G V T G N + QLG+G T     P  I+       V+++A G  + L +T +G V+
Sbjct: 120 TTEGEVFTWGHNAYSQLGNGTTNHGLVPCQISTNLSNKQVIEVACGSYHSLVLTSDGEVF 179

Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 351
           ++G  ++  +G G   ++  PR +    +  + VV ++ G    +A+  +G VY WG   
Sbjct: 180 AWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKV-VVTIACGQMCCMAVVDTGEVYVWGYNG 238

Query: 352 CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLG 408
            G LG G   ++  P  +++L+     +V      T VL D G VY +G   +G LG
Sbjct: 239 NGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLG 295


>gi|440800160|gb|ELR21203.1| regulator of chromosome condensation (RCC1) repeat domain
           containing protein [Acanthamoeba castellanii str. Neff]
          Length = 417

 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 85/299 (28%), Positives = 137/299 (45%), Gaps = 18/299 (6%)

Query: 156 RINFPSAAH------VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRL 209
           RI +P+         +V++     H   + ++G+V+  G NS F             P  
Sbjct: 127 RIYYPTLCEPAQSLGIVKIRTGRQHGIALSKNGEVYIWG-NSEFGQTGLGNKEAQHLPIR 185

Query: 210 VEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG 269
           +E  +      V+ GL+ +  ++  G V T G    GQLGH  T D   PK +  +   G
Sbjct: 186 MEFFRDKSIVDVSCGLDHSAAVSKDGRVWTWGYGIDGQLGHNGTEDELKPKELTVIRGEG 245

Query: 270 SVVQIAAGPSYM-LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRV 328
            + ++  G  +  L     G +++FG+G    LGHGE+   L+P  +        +V  V
Sbjct: 246 -ISRVTCGTDFTGLLNETEGRLFTFGNGEAGQLGHGERGLCLEPSVVPL-----DNVKEV 299

Query: 329 SAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLA-VQVCARKRKT 387
           +AG  H++AL   G  ++WG G  G LGHG   D   PEP+ +L   +  V V A    +
Sbjct: 300 AAGGAHMLALTKDGQAWSWGWGEDGRLGHGATEDFLKPEPIPTLGPAVGVVSVSAGGGHS 359

Query: 388 FVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT 446
             L ++G VYG+G+   G LG    G    V+ P ++ +L    V +   GL H++ +T
Sbjct: 360 LALTESGQVYGWGFNASGRLGL---GNESSVMTPTLIKALADKRVLRAICGLDHSLFIT 415



 Score =  105 bits (263), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 88/350 (25%), Positives = 158/350 (45%), Gaps = 15/350 (4%)

Query: 131 VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDN 190
           V++CG+     LG G      +       P  A  +  +A       +    +++  G +
Sbjct: 55  VYTCGTGRNAQLGVGDLEDYQLPVPVQELPVGASYIDAAAGWTQNFLLTTRHELYYWGSS 114

Query: 191 SSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGH 250
             +       ++ I+ P L E  + +   ++  G      L+  G V+  G++  GQ G 
Sbjct: 115 GVYALLPMRRDKRIYYPTLCEPAQSLGIVKIRTGRQHGIALSKNGEVYIWGNSEFGQTGL 174

Query: 251 GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDEL 310
           G+   +  P  +    +  S+V ++ G  +  AV+ +G V+++G G +  LGH    DEL
Sbjct: 175 GNKEAQHLPIRMEFFRDK-SIVDVSCGLDHSAAVSKDGRVWTWGYGIDGQLGHNGTEDEL 233

Query: 311 QPRAIQTFRRKGIHVVRVSAGDEHVVAL-DSSGYVYTWGKGYCGALGHGDEIDKTLPE-- 367
           +P+ +   R +GI   RV+ G +    L ++ G ++T+G G  G LGHG+      P   
Sbjct: 234 KPKELTVIRGEGIS--RVTCGTDFTGLLNETEGRLFTFGNGEAGQLGHGERGLCLEPSVV 291

Query: 368 PLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSL 427
           PL ++K     +V A       L   G  + +GW   G LG    G ++  L+P  + +L
Sbjct: 292 PLDNVK-----EVAAGGAHMLALTKDGQAWSWGWGEDGRLG---HGATEDFLKPEPIPTL 343

Query: 428 -RAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 476
             A  V  +S G  H++ +T+ G+++G+G N   +LG       + PT I
Sbjct: 344 GPAVGVVSVSAGGGHSLALTESGQVYGWGFNASGRLGLGNESSVMTPTLI 393



 Score = 93.2 bits (230), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 72/249 (28%), Positives = 118/249 (47%), Gaps = 7/249 (2%)

Query: 237 VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 296
           V+TCG+  + QLG GD  D   P  +  L    S +  AAG +    +T    +Y +GS 
Sbjct: 55  VYTCGTGRNAQLGVGDLEDYQLPVPVQELPVGASYIDAAAGWTQNFLLTTRHELYYWGSS 114

Query: 297 SNFCLGHGEQHDELQ-PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGAL 355
             + L    +   +  P   +  +  GI  V++  G +H +AL  +G VY WG    G  
Sbjct: 115 GVYALLPMRRDKRIYYPTLCEPAQSLGI--VKIRTGRQHGIALSKNGEVYIWGNSEFGQT 172

Query: 356 GHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVS 415
           G G++  + LP  +   +    V V      +  +   G V+ +G+   G LG    G  
Sbjct: 173 GLGNKEAQHLPIRMEFFRDKSIVDVSCGLDHSAAVSKDGRVWTWGYGIDGQLGH--NGTE 230

Query: 416 DKVLRPRILDSLRAHHVSQISTGLYHTVVVTD-RGRLFGFGDNERAQLGHDTLRGCLEPT 474
           D+ L+P+ L  +R   +S+++ G   T ++ +  GRLF FG+ E  QLGH     CLEP+
Sbjct: 231 DE-LKPKELTVIRGEGISRVTCGTDFTGLLNETEGRLFTFGNGEAGQLGHGERGLCLEPS 289

Query: 475 EIFIQEMEE 483
            + +  ++E
Sbjct: 290 VVPLDNVKE 298



 Score = 76.3 bits (186), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 74/276 (26%), Positives = 113/276 (40%), Gaps = 55/276 (19%)

Query: 110 SAGNMQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQV 168
           S G ++I TGR H + +S N  V+  G+S  G  G G +  Q +   R+ F     +V V
Sbjct: 139 SLGIVKIRTGRQHGIALSKNGEVYIWGNSEFGQTGLGNKEAQHLPI-RMEFFRDKSIVDV 197

Query: 169 SASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFT 228
           S   +H+A V + G+V+T G       GH  T   + +P+ +  ++G    +VT G +FT
Sbjct: 198 SCGLDHSAAVSKDGRVWTWGYGIDGQLGHNGTEDEL-KPKELTVIRGEGISRVTCGTDFT 256

Query: 229 GFL--------------------------------------------------TIRGHVH 238
           G L                                                  T  G   
Sbjct: 257 GLLNETEGRLFTFGNGEAGQLGHGERGLCLEPSVVPLDNVKEVAAGGAHMLALTKDGQAW 316

Query: 239 TCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
           + G    G+LGHG T D   P+ I  L     VV ++AG  + LA+T +G VY +G  ++
Sbjct: 317 SWGWGEDGRLGHGATEDFLKPEPIPTLGPAVGVVSVSAGGGHSLALTESGQVYGWGFNAS 376

Query: 299 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEH 334
             LG G +   + P  I+    K   V+R   G +H
Sbjct: 377 GRLGLGNESSVMTPTLIKALADK--RVLRAICGLDH 410


>gi|395521017|ref|XP_003764618.1| PREDICTED: RCC1 and BTB domain-containing protein 1 [Sarcophilus
           harrisii]
          Length = 531

 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 78/255 (30%), Positives = 123/255 (48%), Gaps = 11/255 (4%)

Query: 230 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGSVVQIAAGPSYMLAVTGN 287
           ++T    V   G N    LG GD      PK +  L  +++ S+    +GP  +L+ T +
Sbjct: 36  YVTHSDEVFVFGLNCSNCLGTGDNQSTIVPKKLEALCGKKIKSL-SYGSGPHVLLS-TED 93

Query: 288 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGI-HVVRVSAGDEHVVALDSSGYVYT 346
           GVVY++G      LG+G  +  + P  IQ      I  V+ V+ G  H +AL + G VY 
Sbjct: 94  GVVYAWGHNGYSQLGNGTTNQGIAP--IQVCTNLLIKQVIEVACGSHHSMALAADGEVYA 151

Query: 347 WGKGYCGALGHGDEIDKTLPEPLSS-LKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFG 405
           WG   CG +G G   ++  P  +++ L     V +   +  +  ++D G VYG+G+ G G
Sbjct: 152 WGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVSIACGQTSSMAVLDNGEVYGWGYNGNG 211

Query: 406 SLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHD 465
            LG  + G     L P  + +L +  V QI  G  HT+ +TD G L+ +G N   QLG  
Sbjct: 212 QLGLGNNG---NQLTPCRVAALHSVCVLQIVCGYAHTLALTDEGLLYAWGANTYGQLGTG 268

Query: 466 TLRGCLEPTEIFIQE 480
                L P +I +++
Sbjct: 269 NKSNLLSPAQIMVEK 283



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 74/255 (29%), Positives = 119/255 (46%), Gaps = 12/255 (4%)

Query: 171 SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
           S N A +V  S +VF  G N S C G  D N+    P+ +EAL G   K ++ G      
Sbjct: 30  SANEAIYVTHSDEVFVFGLNCSNCLGTGD-NQSTIVPKKLEALCGKKIKSLSYGSGPHVL 88

Query: 231 LTIR-GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 289
           L+   G V+  G N + QLG+G T     P  +     +  V+++A G  + +A+  +G 
Sbjct: 89  LSTEDGVVYAWGHNGYSQLGNGTTNQGIAPIQVCTNLLIKQVIEVACGSHHSMALAADGE 148

Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAIQT---FRRKGIHVVRVSAGDEHVVALDSSGYVYT 346
           VY++G  +   +G G   ++  PR +      +R    VV ++ G    +A+  +G VY 
Sbjct: 149 VYAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKR----VVSIACGQTSSMAVLDNGEVYG 204

Query: 347 WGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGS 406
           WG    G LG G+  ++  P  +++L S   +Q+      T  L D G +Y +G   +G 
Sbjct: 205 WGYNGNGQLGLGNNGNQLTPCRVAALHSVCVLQIVCGYAHTLALTDEGLLYAWGANTYGQ 264

Query: 407 LGFPDRGVSDKVLRP 421
           LG    G    +L P
Sbjct: 265 LG---TGNKSNLLSP 276



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 63/228 (27%), Positives = 99/228 (43%), Gaps = 3/228 (1%)

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
           H     + G V+  G N     G+  TN+ I   ++   L      +V  G + +  L  
Sbjct: 86  HVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPIQVCTNLLIKQVIEVACGSHHSMALAA 145

Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
            G V+  G N  GQ+G G T ++PTP+ +     +  VV IA G +  +AV  NG VY +
Sbjct: 146 DGEVYAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVSIACGQTSSMAVLDNGEVYGW 205

Query: 294 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 353
           G   N  LG G   ++L P  +       + V+++  G  H +AL   G +Y WG    G
Sbjct: 206 GYNGNGQLGLGNNGNQLTPCRVAALH--SVCVLQIVCGYAHTLALTDEGLLYAWGANTYG 263

Query: 354 ALGHGDEIDKTLPEPLSSLKSHLA-VQVCARKRKTFVLVDTGSVYGFG 400
            LG G++ +   P  +   K  +  +  C     +      G VY +G
Sbjct: 264 QLGTGNKSNLLSPAQIMVEKERVVEIAACHSAHTSAAKTQGGHVYMWG 311



 Score = 59.7 bits (143), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 55/184 (29%), Positives = 86/184 (46%), Gaps = 6/184 (3%)

Query: 114 MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +++  G +H++ L ++  V++ G + CG +G G    Q       N      VV ++  +
Sbjct: 131 IEVACGSHHSMALAADGEVYAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVSIACGQ 190

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
             +  VL +G+V+  G N +   G    N     P  V AL  V   Q+  G   T  LT
Sbjct: 191 TSSMAVLDNGEVYGWGYNGNGQLG-LGNNGNQLTPCRVAALHSVCVLQIVCGYAHTLALT 249

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY--MLAVTGNGVV 290
             G ++  G+NT+GQLG G+  +  +P  I  + E   VV+IAA  S     A T  G V
Sbjct: 250 DEGLLYAWGANTYGQLGTGNKSNLLSPAQI--MVEKERVVEIAACHSAHTSAAKTQGGHV 307

Query: 291 YSFG 294
           Y +G
Sbjct: 308 YMWG 311


>gi|15218867|ref|NP_176767.1| Regulator of chromosome condensation (RCC1) family with FYVE zinc
           finger domain [Arabidopsis thaliana]
 gi|6227017|gb|AAF06053.1|AC009513_9 Contains PF|00169 Pleckstrin homology domain, 6 PF|00415 Regulator
           of chromosome condensation (RCC1) domains and a PF|01363
           FYVE Zinc finger domain [Arabidopsis thaliana]
 gi|332196320|gb|AEE34441.1| Regulator of chromosome condensation (RCC1) family with FYVE zinc
           finger domain [Arabidopsis thaliana]
          Length = 1006

 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 93/321 (28%), Positives = 149/321 (46%), Gaps = 30/321 (9%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V  +S    HAA V + G+VF  G+ +S   G +  N  I  P+ VE+L+ V  + V   
Sbjct: 294 VQSISLGAKHAALVTRQGEVFCWGNGNSGKLGLK-VNIDIDHPKRVESLEDVAVRSVACS 352

Query: 225 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRP-----TPKSIAPLEEVGSVVQIAAGPS 279
            + T  +T  G ++  G +       G T+++      T K    L    +V+ +A G  
Sbjct: 353 DHQTCAVTESGELYLWGID-------GGTIEQSGSQFLTRKISDVLGGSLTVLSVACGAW 405

Query: 280 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL- 338
           +   VT +G ++++GSG+   LGHG      +P+ +++ RR  + V+ VS G  H  A+ 
Sbjct: 406 HTAIVTSSGQLFTYGSGTFGVLGHGSLESVTKPKEVESLRR--MKVISVSCGPWHTAAIV 463

Query: 339 -----------DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKT 387
                       S G ++TWG G  G LGH D   K +P  ++ L  H  ++V      T
Sbjct: 464 ETANDRKFYNAKSCGKLFTWGDGDKGRLGHADSKRKLVPTCVTELIDHDFIKVSCGWTLT 523

Query: 388 FVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTD 447
             L  +G+VY  G    G LG P     DK +   +L +L    V  I++G +H  V+T 
Sbjct: 524 VALSISGTVYTMGSSIHGQLGCPR--AKDKSVNV-VLGNLTRQFVKDIASGSHHVAVLTS 580

Query: 448 RGRLFGFGDNERAQLGHDTLR 468
            G ++ +G     QLG   +R
Sbjct: 581 FGNVYTWGKGMNGQLGLGDVR 601



 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 66/220 (30%), Positives = 103/220 (46%), Gaps = 19/220 (8%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V+ V+    H A V  SGQ+FT G  +    GH  +   + +P+ VE+L+ +    V+ G
Sbjct: 397 VLSVACGAWHTAIVTSSGQLFTYGSGTFGVLGH-GSLESVTKPKEVESLRRMKVISVSCG 455

Query: 225 ----------LNFTGFLTIR--GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV 272
                      N   F   +  G + T G    G+LGH D+  +  P  +  L +    +
Sbjct: 456 PWHTAAIVETANDRKFYNAKSCGKLFTWGDGDKGRLGHADSKRKLVPTCVTELID-HDFI 514

Query: 273 QIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGD 332
           +++ G +  +A++ +G VY+ GS  +  LG     D+     +    R+   V  +++G 
Sbjct: 515 KVSCGWTLTVALSISGTVYTMGSSIHGQLGCPRAKDKSVNVVLGNLTRQ--FVKDIASGS 572

Query: 333 EHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP---EPL 369
            HV  L S G VYTWGKG  G LG GD  D+  P   EPL
Sbjct: 573 HHVAVLTSFGNVYTWGKGMNGQLGLGDVRDRNSPVLVEPL 612



 Score = 76.6 bits (187), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 67/225 (29%), Positives = 104/225 (46%), Gaps = 14/225 (6%)

Query: 104 SDIVETSAGNMQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGP-----ETTQCVSFTRI 157
           SD++  S   + +  G +HT ++++S  +F+ GS   GVLGHG      +  +  S  R+
Sbjct: 388 SDVLGGSLTVLSVACGAWHTAIVTSSGQLFTYGSGTFGVLGHGSLESVTKPKEVESLRRM 447

Query: 158 NFPSAA----HVVQVSASENHAAF--VLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVE 211
              S +    H   +  + N   F      G++FT GD      GH D+ R +  P  V 
Sbjct: 448 KVISVSCGPWHTAAIVETANDRKFYNAKSCGKLFTWGDGDKGRLGHADSKRKLV-PTCVT 506

Query: 212 ALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSV 271
            L      +V+ G   T  L+I G V+T GS+ HGQLG     D+     +  L     V
Sbjct: 507 ELIDHDFIKVSCGWTLTVALSISGTVYTMGSSIHGQLGCPRAKDKSVNVVLGNLTR-QFV 565

Query: 272 VQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQ 316
             IA+G  ++  +T  G VY++G G N  LG G+  D   P  ++
Sbjct: 566 KDIASGSHHVAVLTSFGNVYTWGKGMNGQLGLGDVRDRNSPVLVE 610



 Score = 66.6 bits (161), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 58/217 (26%), Positives = 101/217 (46%), Gaps = 20/217 (9%)

Query: 271 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 330
           V  I+ G  +   VT  G V+ +G+G++  LG     D   P+ +++   + + V  V+ 
Sbjct: 294 VQSISLGAKHAALVTRQGEVFCWGNGNSGKLGLKVNIDIDHPKRVESL--EDVAVRSVAC 351

Query: 331 GDEHVVALDSSGYVYTWGKGYCGALGHGDE-IDKTLPEPLSSLKSHLAVQVCARKRKTFV 389
            D    A+  SG +Y WG         G + + + + + L    + L+V   A    T +
Sbjct: 352 SDHQTCAVTESGELYLWGIDGGTIEQSGSQFLTRKISDVLGGSLTVLSVACGAWH--TAI 409

Query: 390 LVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVV---- 445
           +  +G ++ +G   FG LG    G  + V +P+ ++SLR   V  +S G +HT  +    
Sbjct: 410 VTSSGQLFTYGSGTFGVLGH---GSLESVTKPKEVESLRRMKVISVSCGPWHTAAIVETA 466

Query: 446 TDR--------GRLFGFGDNERAQLGHDTLRGCLEPT 474
            DR        G+LF +GD ++ +LGH   +  L PT
Sbjct: 467 NDRKFYNAKSCGKLFTWGDGDKGRLGHADSKRKLVPT 503



 Score = 66.6 bits (161), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 51/185 (27%), Positives = 85/185 (45%), Gaps = 8/185 (4%)

Query: 293 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 352
           +G+ +    G   Q+D L P+ +++       V  +S G +H   +   G V+ WG G  
Sbjct: 264 WGAITGLIDGSKNQNDALSPKLLESATM--FDVQSISLGAKHAALVTRQGEVFCWGNGNS 321

Query: 353 GALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDR 412
           G LG    ID   P+ + SL+      V     +T  + ++G +Y +G  G    G  ++
Sbjct: 322 GKLGLKVNIDIDHPKRVESLEDVAVRSVACSDHQTCAVTESGELYLWGIDG----GTIEQ 377

Query: 413 GVSDKVLRPRILDSLRAH-HVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCL 471
             S  + R +I D L     V  ++ G +HT +VT  G+LF +G      LGH +L    
Sbjct: 378 SGSQFLTR-KISDVLGGSLTVLSVACGAWHTAIVTSSGQLFTYGSGTFGVLGHGSLESVT 436

Query: 472 EPTEI 476
           +P E+
Sbjct: 437 KPKEV 441


>gi|402901986|ref|XP_003913912.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 1
           [Papio anubis]
          Length = 551

 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 80/275 (29%), Positives = 122/275 (44%), Gaps = 5/275 (1%)

Query: 128 NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS-ASENHAAFVLQSGQVFT 186
           N  +F  G++ CG LG G +    +   R++  S   +  +S  S  H       G+VFT
Sbjct: 64  NDEIFVLGTNCCGCLGLG-DVQSTIEPRRLDSLSGKKIASLSYGSGPHIVLATTEGEVFT 122

Query: 187 CGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHG 246
            G N+    G+  TN  +   ++   L      +V  G   +  LT  G V   G N  G
Sbjct: 123 WGHNAYSQLGNGTTNHGLVPCQISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSG 182

Query: 247 QLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ 306
           Q+G G T+++P P+ +    +   VV IA G    +AV   G VY +G   N  LG G  
Sbjct: 183 QVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGSS 242

Query: 307 HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP 366
            +  QP   +    +GI V RV+ G  H + L   G VY WG    G LG G++ +++ P
Sbjct: 243 GN--QPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYP 300

Query: 367 EPLSSLKSH-LAVQVCARKRKTFVLVDTGSVYGFG 400
            P++  K   + +  C     +      G VY +G
Sbjct: 301 TPVTVEKDRIIEIAACHSTHTSAAKTQGGHVYMWG 335



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 81/283 (28%), Positives = 135/283 (47%), Gaps = 12/283 (4%)

Query: 203 PIFRPRLVEALKGV--PCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPK 260
           PIF     E L+ +   C   +AG N   + T+   +   G+N  G LG GD      P+
Sbjct: 32  PIFSLCSEEELQLIRQACVFGSAG-NEVLYTTVNDEIFVLGTNCCGCLGLGDVQSTIEPR 90

Query: 261 SIAPL--EEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTF 318
            +  L  +++ S+    +GP  +LA T  G V+++G  +   LG+G  +  L P  I T 
Sbjct: 91  RLDSLSGKKIASL-SYGSGPHIVLATT-EGEVFTWGHNAYSQLGNGTTNHGLVPCQIST- 147

Query: 319 RRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLS-SLKSHLA 377
                 V+ V+ G  H + L S G V+ WG    G +G G  +++ +P  ++  L++ + 
Sbjct: 148 NLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVV 207

Query: 378 VQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIST 437
           V +   +     +VDTG VY +G+ G G LG    G      R   L  +R   V +++ 
Sbjct: 208 VTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGSSGNQPTPCRVAALQGIR---VQRVAC 264

Query: 438 GLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQE 480
           G  HT+V+TD G+++ +G N   QLG         PT + +++
Sbjct: 265 GYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPVTVEK 307



 Score = 86.7 bits (213), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 66/237 (27%), Positives = 109/237 (45%), Gaps = 3/237 (1%)

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL- 231
           N   +   + ++F  G N   C G  D    I  PR +++L G     ++ G      L 
Sbjct: 56  NEVLYTTVNDEIFVLGTNCCGCLGLGDVQSTI-EPRRLDSLSGKKIASLSYGSGPHIVLA 114

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
           T  G V T G N + QLG+G T     P  I+       V+++A G  + L +T +G V+
Sbjct: 115 TTEGEVFTWGHNAYSQLGNGTTNHGLVPCQISTNLSNKQVIEVACGSYHSLVLTSDGEVF 174

Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 351
           ++G  ++  +G G   ++  PR +    +  + VV ++ G    +A+  +G VY WG   
Sbjct: 175 AWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKV-VVTIACGQMCCMAVVDTGEVYVWGYNG 233

Query: 352 CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLG 408
            G LG G   ++  P  +++L+     +V      T VL D G VY +G   +G LG
Sbjct: 234 NGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLG 290


>gi|356501930|ref|XP_003519776.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Glycine
           max]
          Length = 388

 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 100/373 (26%), Positives = 161/373 (43%), Gaps = 50/373 (13%)

Query: 127 SNSSVFSCGSSLCGVLG-------HGPETTQCVSFTRINFPS--AAHVVQVSASENHAAF 177
           S   V+S G+   G LG       H P+     S + I+  +   AHV+ ++++      
Sbjct: 16  SEQRVWSWGAGTEGQLGTKILQDEHFPQLLHQFSLSSISSLACGGAHVIALTSA------ 69

Query: 178 VLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHV 237
               G+  + G  +S   GH +       P+ V +L G     V+AG + +GF++  G V
Sbjct: 70  ----GKALSWGRGNSGQLGHGEVVSNTLYPKAVTSLDGYFITHVSAGWSHSGFVSDTGFV 125

Query: 238 HTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 297
            TCG  + GQLGHGD     +P  ++   ++  V Q+A G  + L +     VY FGSG 
Sbjct: 126 FTCGDGSFGQLGHGDNASHCSPVKVSCFVDL-HVAQVACGMRHSLVLLKGNQVYGFGSGK 184

Query: 298 NFCLGHGEQHDELQ----PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 353
              L  G  +D ++    P+ +  F  +G+ +V  +A  +H  A+   G+VYTWG+G+ G
Sbjct: 185 RGQL--GVSNDRVKSVNVPKVVSGF--EGVEIVGTAANGDHSAAVSVDGHVYTWGRGFKG 240

Query: 354 ALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLG----- 408
                   D  +P+ L+S  S    +V         +   G VY  G    G L      
Sbjct: 241 FE------DAHVPQCLNS--SLNFTKVALGWNHALAMSGEGEVYMLGGNHLGVLSDLQNI 292

Query: 409 -----FPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 463
                FPD     +      +  L    ++ I+ G  H+V+VT+ G +  +G  E  QLG
Sbjct: 293 GPAKHFPDL----REFNLEKVPGLDGTKITDIAAGAEHSVIVTEHGEIKTWGWGEHGQLG 348

Query: 464 HDTLRGCLEPTEI 476
               R    P  +
Sbjct: 349 LGDTRDQTSPVTV 361



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 71/265 (26%), Positives = 118/265 (44%), Gaps = 19/265 (7%)

Query: 115 QITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
            ++ G  H+  +S++  VF+CG    G LGHG   + C S  +++     HV QV+    
Sbjct: 108 HVSAGWSHSGFVSDTGFVFTCGDGSFGQLGHGDNASHC-SPVKVSCFVDLHVAQVACGMR 166

Query: 174 HAAFVLQSGQVFTCGDNSSFCCG-HRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
           H+  +L+  QV+  G       G   D  + +  P++V   +GV      A  + +  ++
Sbjct: 167 HSLVLLKGNQVYGFGSGKRGQLGVSNDRVKSVNVPKVVSGFEGVEIVGTAANGDHSAAVS 226

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
           + GHV+T G    G        D   P+    L    +  ++A G ++ LA++G G VY 
Sbjct: 227 VDGHVYTWGRGFKG------FEDAHVPQC---LNSSLNFTKVALGWNHALAMSGEGEVYM 277

Query: 293 FGSGSNFCL------GHGEQHDELQPRAIQTFR-RKGIHVVRVSAGDEHVVALDSSGYVY 345
            G      L      G  +   +L+   ++      G  +  ++AG EH V +   G + 
Sbjct: 278 LGGNHLGVLSDLQNIGPAKHFPDLREFNLEKVPGLDGTKITDIAAGAEHSVIVTEHGEIK 337

Query: 346 TWGKGYCGALGHGDEIDKTLPEPLS 370
           TWG G  G LG GD  D+T P  +S
Sbjct: 338 TWGWGEHGQLGLGDTRDQTSPVTVS 362



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 81/305 (26%), Positives = 121/305 (39%), Gaps = 25/305 (8%)

Query: 119 GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
           G +   L S     S G    G LGHG   +  +    +       +  VSA  +H+ FV
Sbjct: 60  GAHVIALTSAGKALSWGRGNSGQLGHGEVVSNTLYPKAVTSLDGYFITHVSAGWSHSGFV 119

Query: 179 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVH 238
             +G VFTCGD S    GH D N     P  V     +   QV  G+  +  L     V+
Sbjct: 120 SDTGFVFTCGDGSFGQLGHGD-NASHCSPVKVSCFVDLHVAQVACGMRHSLVLLKGNQVY 178

Query: 239 TCGSNTHGQLGHGDTLDRP--TPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 296
             GS   GQLG  +   +    PK ++  E V  +V  AA   +  AV+ +G VY++G G
Sbjct: 179 GFGSGKRGQLGVSNDRVKSVNVPKVVSGFEGV-EIVGTAANGDHSAAVSVDGHVYTWGRG 237

Query: 297 -SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGAL 355
              F        D   P+ + +     ++  +V+ G  H +A+   G VY  G  + G L
Sbjct: 238 FKGF-------EDAHVPQCLNS----SLNFTKVALGWNHALAMSGEGEVYMLGGNHLGVL 286

Query: 356 GHGDEID--KTLP-------EPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGS 406
                I   K  P       E +  L       + A    + ++ + G +  +GW   G 
Sbjct: 287 SDLQNIGPAKHFPDLREFNLEKVPGLDGTKITDIAAGAEHSVIVTEHGEIKTWGWGEHGQ 346

Query: 407 LGFPD 411
           LG  D
Sbjct: 347 LGLGD 351



 Score = 48.9 bits (115), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 36/138 (26%), Positives = 55/138 (39%), Gaps = 2/138 (1%)

Query: 339 DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYG 398
           +S   V++WG G  G LG     D+  P+ L          +         L   G    
Sbjct: 15  ESEQRVWSWGAGTEGQLGTKILQDEHFPQLLHQFSLSSISSLACGGAHVIALTSAGKALS 74

Query: 399 FGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNE 458
           +G    G LG  +  V    L P+ + SL  + ++ +S G  H+  V+D G +F  GD  
Sbjct: 75  WGRGNSGQLGHGE--VVSNTLYPKAVTSLDGYFITHVSAGWSHSGFVSDTGFVFTCGDGS 132

Query: 459 RAQLGHDTLRGCLEPTEI 476
             QLGH        P ++
Sbjct: 133 FGQLGHGDNASHCSPVKV 150


>gi|145512133|ref|XP_001441983.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124409255|emb|CAK74586.1| unnamed protein product [Paramecium tetraurelia]
          Length = 2041

 Score =  107 bits (268), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 73/249 (29%), Positives = 120/249 (48%), Gaps = 9/249 (3%)

Query: 220 QVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHG--DTLDRPTPKSIAPLEEVGSVVQIAAG 277
           ++  G + T  LT  G V   G  + G LG+G  D L+ PT   I+ L       +IAAG
Sbjct: 303 KIVCGHHHTMALTEEGAVFIWGMGSQGCLGNGRVDDLETPTQIDISGL----FFNEIAAG 358

Query: 278 PSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
             + LA+  N  VY +G  +   LG G + ++L P+ +  F RK I    +  GD+H   
Sbjct: 359 AYHSLALAKNNQVYGWGVNNRGQLGIGNKENQLLPKQLTFFDRKKIQCQYLYCGDQHSAC 418

Query: 338 LDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVY 397
           + ++  +YTWG G    LGHG  +D+  P+ +  L+    + V      +  + + G VY
Sbjct: 419 ITTNKELYTWGNGDYYRLGHGMLLDEMEPKKIEILQDVYVLDVALGTIHSLCITNEGFVY 478

Query: 398 GFGWMGFGSLGFPDRGVSDKVLRPRI---LDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 454
            +G      LG P +   D+ L  R+     S R     Q++ G  H++ +++ G L+ +
Sbjct: 479 AWGSSKDSVLGMPTQQYKDQTLPQRVGLMSQSFRDASFYQVAAGTSHSLSLSENGHLYVW 538

Query: 455 GDNERAQLG 463
           G N+ + LG
Sbjct: 539 GSNKNSLLG 547



 Score = 86.7 bits (213), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 73/270 (27%), Positives = 130/270 (48%), Gaps = 16/270 (5%)

Query: 98  QSVEHSSDIVETSAGN---MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVS 153
           Q+  ++SD ++  A     ++I  G +HT+ L    +VF  G    G LG+G       +
Sbjct: 283 QAEPNNSDFIQPIALKQEFVKIVCGHHHTMALTEEGAVFIWGMGSQGCLGNG-RVDDLET 341

Query: 154 FTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVE-A 212
            T+I+  S     +++A   H+  + ++ QV+  G N+    G  +    +   +L    
Sbjct: 342 PTQIDI-SGLFFNEIAAGAYHSLALAKNNQVYGWGVNNRGQLGIGNKENQLLPKQLTFFD 400

Query: 213 LKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV 272
            K + C+ +  G   +  +T    ++T G+  + +LGHG  LD   PK I  L++V  V+
Sbjct: 401 RKKIQCQYLYCGDQHSACITTNKELYTWGNGDYYRLGHGMLLDEMEPKKIEILQDV-YVL 459

Query: 273 QIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH--DELQPRAI----QTFRRKGIHVV 326
            +A G  + L +T  G VY++GS  +  LG   Q   D+  P+ +    Q+FR    +  
Sbjct: 460 DVALGTIHSLCITNEGFVYAWGSSKDSVLGMPTQQYKDQTLPQRVGLMSQSFRDASFY-- 517

Query: 327 RVSAGDEHVVALDSSGYVYTWGKGYCGALG 356
           +V+AG  H ++L  +G++Y WG      LG
Sbjct: 518 QVAAGTSHSLSLSENGHLYVWGSNKNSLLG 547



 Score = 59.3 bits (142), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 49/186 (26%), Positives = 78/186 (41%), Gaps = 14/186 (7%)

Query: 297 SNFCLGHGEQH--DELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGA 354
           S + L   E +  D +QP A++         V++  G  H +AL   G V+ WG G  G 
Sbjct: 277 SQYNLNQAEPNNSDFIQPIALKQ------EFVKIVCGHHHTMALTEEGAVFIWGMGSQGC 330

Query: 355 LGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGV 414
           LG+G   D   P  +  +      ++ A    +  L     VYG+G    G LG    G 
Sbjct: 331 LGNGRVDDLETPTQID-ISGLFFNEIAAGAYHSLALAKNNQVYGWGVNNRGQLGI---GN 386

Query: 415 SDKVLRPRILDSLRAHHVS--QISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLE 472
            +  L P+ L       +    +  G  H+  +T    L+ +G+ +  +LGH  L   +E
Sbjct: 387 KENQLLPKQLTFFDRKKIQCQYLYCGDQHSACITTNKELYTWGNGDYYRLGHGMLLDEME 446

Query: 473 PTEIFI 478
           P +I I
Sbjct: 447 PKKIEI 452



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 65/312 (20%), Positives = 117/312 (37%), Gaps = 48/312 (15%)

Query: 177 FVLQSGQVFTCGDNSS-FCCGHRDTNRPI-----------------FRPRLVEALKGVPC 218
           F+  +G ++ CG N     C +    +                   F P  +   +    
Sbjct: 631 FIDNTGHLYACGSNQKGMLCKNPHKKQKFKQFIPQKDPPDILFEQSFTPIEIVYFRNTII 690

Query: 219 KQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRP-TPKSIAPLEEVGSVVQIAAG 277
           + ++   N    +T +G+ +  GSN + QLG G   D   TP  +    E   ++    G
Sbjct: 691 RYISCQYNHCIAVTAKGNAYCWGSNQYNQLGLGFQSDHVFTPILLEGAIEQKVIIMAITG 750

Query: 278 PSYMLAVTGNGVVYSFGSGSNFCLGHGEQ--HDELQPRAIQTFRRKGIHVVRVSAGDEHV 335
             +   +T  G V+SFG+     LGH  +  +  ++PR I         ++ ++  ++ +
Sbjct: 751 EKFSALLTDQGEVWSFGTSEFGVLGHELKNFYVIMEPRMINDIPS----MINLACSNQTM 806

Query: 336 VALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGS 395
            A+D    ++ WG    G LG   + D          +  + +Q   +    F+      
Sbjct: 807 FAIDQKQQLWAWGNNQFGQLGISLQRD----------EEEINLQTNKQVSSEFL------ 850

Query: 396 VYGFGWMG-FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 454
                W     SL  P+R +  +  +P          V Q+S GLYHT ++T    L   
Sbjct: 851 ----EWKAQLKSLKNPERYIVYQPDKPSTRSITGEAFVDQVSCGLYHTCIITTNQELLTC 906

Query: 455 GDNERAQLGHDT 466
           G  + A  GH +
Sbjct: 907 GLAKYA--GHQS 916



 Score = 47.0 bits (110), Expect = 0.025,   Method: Composition-based stats.
 Identities = 66/295 (22%), Positives = 117/295 (39%), Gaps = 40/295 (13%)

Query: 43  GGSHGLYPQKFRSLVDLAASQLCALHSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEH 102
           G  H   PQK     DL  S  C   +++  + +  Q  + +      ++++ F Q+   
Sbjct: 552 GQEHTCVPQKVEQSEDLEKS--CIEKALFFNLKKEEQQMMKD------EKLVTFEQTTLM 603

Query: 103 SSDIVETSAGNMQ------ITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCV--- 152
            + I++++ G          T G  +T  I N+  +++CGS+  G+L   P   Q     
Sbjct: 604 KT-ILQSTMGQSHECKYKFATLGTKNTYFIDNTGHLYACGSNQKGMLCKNPHKKQKFKQF 662

Query: 153 -------------SFTRINFPSAAHVV--QVSASENHAAFVLQSGQVFTCGDNSSFCCGH 197
                        SFT I      + +   +S   NH   V   G  +  G N     G 
Sbjct: 663 IPQKDPPDILFEQSFTPIEIVYFRNTIIRYISCQYNHCIAVTAKGNAYCWGSNQYNQLGL 722

Query: 198 RDTNRPIFRPRLVE-ALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGH--GDTL 254
              +  +F P L+E A++         G  F+  LT +G V + G++  G LGH   +  
Sbjct: 723 GFQSDHVFTPILLEGAIEQKVIIMAITGEKFSALLTDQGEVWSFGTSEFGVLGHELKNFY 782

Query: 255 DRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDE 309
               P+ I    ++ S++ +A     M A+     ++++G+     LG   Q DE
Sbjct: 783 VIMEPRMI---NDIPSMINLACSNQTMFAIDQKQQLWAWGNNQFGQLGISLQRDE 834


>gi|148234239|ref|NP_001080313.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
           containing protein 2 [Xenopus laevis]
 gi|28278605|gb|AAH44119.1| Chc1l-prov protein [Xenopus laevis]
          Length = 526

 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 79/278 (28%), Positives = 127/278 (45%), Gaps = 5/278 (1%)

Query: 125 LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS-ASENHAAFVLQSGQ 183
           +  N  VF  G++  G LG G +    +   RI+  S   +V +S  S  H   V   G+
Sbjct: 36  ITKNDEVFVMGTNSSGCLGTG-DAQSIIEPRRIDMLSGKRIVSLSYGSGPHVVIVTSDGE 94

Query: 184 VFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 243
           V++ G N+    G+  TN+ +   ++   L       V  G + +  LT  G V+  G N
Sbjct: 95  VYSWGHNAYSQLGNGSTNQALSPCQVSTNLINKKAHSVACGSHHSMVLTCDGEVYAWGYN 154

Query: 244 THGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH 303
             GQ+G G T ++P P+ +    +  +V+ IA G    +AV  NG VY++G   N  LG 
Sbjct: 155 NSGQVGSGSTANQPIPRKVTSCLQNKTVIGIACGQMSSMAVVDNGEVYAWGYNGNGQLGL 214

Query: 304 GEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK 363
           G   +  QP   +    +GI V +V  G  H +AL   G +Y WG    G LG G++ ++
Sbjct: 215 GSSGN--QPTPCRIAALQGIRVEQVVCGYAHTLALTDEGVMYAWGANSYGQLGTGNKSNQ 272

Query: 364 TLPEPLSSLKSHLA-VQVCARKRKTFVLVDTGSVYGFG 400
           + P  +   K  +  +  C     +     +G VY +G
Sbjct: 273 SYPVQVIVDKERIVEIAACHSSHTSAAKSQSGQVYMWG 310



 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 81/281 (28%), Positives = 126/281 (44%), Gaps = 9/281 (3%)

Query: 203 PIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSI 262
           PIF     E LK +    V    N   ++T    V   G+N+ G LG GD      P+ I
Sbjct: 8   PIFALCPQEVLKFIQQACVFGAGNEVLYITKNDEVFVMGTNSSGCLGTGDAQSIIEPRRI 67

Query: 263 APLEEVGSV-VQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQT-FRR 320
             L     V +   +GP +++ VT +G VYS+G  +   LG+G  +  L P  + T    
Sbjct: 68  DMLSGKRIVSLSYGSGP-HVVIVTSDGEVYSWGHNAYSQLGNGSTNQALSPCQVSTNLIN 126

Query: 321 KGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSS-LKSHLAVQ 379
           K  H   V+ G  H + L   G VY WG    G +G G   ++ +P  ++S L++   + 
Sbjct: 127 KKAH--SVACGSHHSMVLTCDGEVYAWGYNNSGQVGSGSTANQPIPRKVTSCLQNKTVIG 184

Query: 380 VCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGL 439
           +   +  +  +VD G VY +G+ G G LG    G      R   L  +R   V Q+  G 
Sbjct: 185 IACGQMSSMAVVDNGEVYAWGYNGNGQLGLGSSGNQPTPCRIAALQGIR---VEQVVCGY 241

Query: 440 YHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQE 480
            HT+ +TD G ++ +G N   QLG         P ++ + +
Sbjct: 242 AHTLALTDEGVMYAWGANSYGQLGTGNKSNQSYPVQVIVDK 282



 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 69/267 (25%), Positives = 122/267 (45%), Gaps = 14/267 (5%)

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN-FTGFL 231
           N   ++ ++ +VF  G NSS C G  D  + I  PR ++ L G     ++ G       +
Sbjct: 31  NEVLYITKNDEVFVMGTNSSGCLGTGDA-QSIIEPRRIDMLSGKRIVSLSYGSGPHVVIV 89

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
           T  G V++ G N + QLG+G T    +P  ++          +A G  + + +T +G VY
Sbjct: 90  TSDGEVYSWGHNAYSQLGNGSTNQALSPCQVSTNLINKKAHSVACGSHHSMVLTCDGEVY 149

Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 351
           ++G  ++  +G G   ++  PR + +  +    V+ ++ G    +A+  +G VY WG   
Sbjct: 150 AWGYNNSGQVGSGSTANQPIPRKVTSCLQNKT-VIGIACGQMSSMAVVDNGEVYAWGYNG 208

Query: 352 CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLG--- 408
            G LG G   ++  P  +++L+     QV      T  L D G +Y +G   +G LG   
Sbjct: 209 NGQLGLGSSGNQPTPCRIAALQGIRVEQVVCGYAHTLALTDEGVMYAWGANSYGQLGTGN 268

Query: 409 -----FPDRGVSDKVLRPRILDSLRAH 430
                +P + + DK    RI++    H
Sbjct: 269 KSNQSYPVQVIVDK---ERIVEIAACH 292


>gi|432930911|ref|XP_004081521.1| PREDICTED: RCC1 and BTB domain-containing protein 1-like [Oryzias
           latipes]
          Length = 531

 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 85/284 (29%), Positives = 131/284 (46%), Gaps = 8/284 (2%)

Query: 200 TNRPIFRPRLVEALKGVPCKQVT-AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPT 258
           T  PIF    +E L  +    V  +  N   ++T    V   G N    LG GD+     
Sbjct: 5   TKWPIFSLMGLEELSMIRKACVFGSSANEAVYVTHDDEVFVLGLNCSNCLGTGDSQSTIV 64

Query: 259 PKSIAPLEEVGSV-VQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQT 317
           PK +  L     V +   +GP  ++A T +G ++++G      LG+G  +  + P  +  
Sbjct: 65  PKKLDFLNGRKIVSLSYGSGPHVLMA-TEDGELFAWGHNGYSQLGNGTTNQGVAPVLVSA 123

Query: 318 FRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSS-LKSHL 376
                  VV V+ G  H +AL  SG VY WG   CG +G G   ++  P  +SS L++ +
Sbjct: 124 -NMLNKKVVEVACGSHHSMALTDSGEVYAWGYNNCGQVGSGSTANQPTPRRVSSCLQNKV 182

Query: 377 AVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS 436
           AV +   +  +  +VD G VYG+G+ G G LG  + G     L P  L +L+   V QI 
Sbjct: 183 AVGIVCGQTSSLAVVDNGEVYGWGYNGNGQLGLGNNG---NQLTPCRLVALQGLCVLQIV 239

Query: 437 TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQE 480
            G  H + ++D G L+ +G N   QLG       L P +I  ++
Sbjct: 240 CGYAHCLALSDEGVLYAWGSNTYGQLGTGNKSNQLSPVQIMSEK 283



 Score = 99.4 bits (246), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 79/276 (28%), Positives = 127/276 (46%), Gaps = 7/276 (2%)

Query: 128 NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS-ASENHAAFVLQSGQVFT 186
           +  VF  G +    LG G   +  V   +++F +   +V +S  S  H     + G++F 
Sbjct: 40  DDEVFVLGLNCSNCLGTGDSQSTIVP-KKLDFLNGRKIVSLSYGSGPHVLMATEDGELFA 98

Query: 187 CGDNSSFCCGHRDTNRPIFRPRLVEA-LKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTH 245
            G N     G+  TN+ +  P LV A +      +V  G + +  LT  G V+  G N  
Sbjct: 99  WGHNGYSQLGNGTTNQGV-APVLVSANMLNKKVVEVACGSHHSMALTDSGEVYAWGYNNC 157

Query: 246 GQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGE 305
           GQ+G G T ++PTP+ ++   +    V I  G +  LAV  NG VY +G   N  LG G 
Sbjct: 158 GQVGSGSTANQPTPRRVSSCLQNKVAVGIVCGQTSSLAVVDNGEVYGWGYNGNGQLGLGN 217

Query: 306 QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTL 365
             ++L P  +     +G+ V+++  G  H +AL   G +Y WG    G LG G++ ++  
Sbjct: 218 NGNQLTPCRLVAL--QGLCVLQIVCGYAHCLALSDEGVLYAWGSNTYGQLGTGNKSNQLS 275

Query: 366 PEPLSSLKSHLA-VQVCARKRKTFVLVDTGSVYGFG 400
           P  + S K  +  V  C     +     +G VY +G
Sbjct: 276 PVQIMSEKERIVEVAACHSTHTSAAKTQSGQVYMWG 311



 Score = 82.4 bits (202), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 75/288 (26%), Positives = 127/288 (44%), Gaps = 7/288 (2%)

Query: 170 ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
           +S N A +V    +VF  G N S C G  D+   I  P+ ++ L G     ++ G     
Sbjct: 29  SSANEAVYVTHDDEVFVLGLNCSNCLGTGDSQSTIV-PKKLDFLNGRKIVSLSYGSGPHV 87

Query: 230 FL-TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG 288
            + T  G +   G N + QLG+G T     P  ++       VV++A G  + +A+T +G
Sbjct: 88  LMATEDGELFAWGHNGYSQLGNGTTNQGVAPVLVSANMLNKKVVEVACGSHHSMALTDSG 147

Query: 289 VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 348
            VY++G  +   +G G   ++  PR + +  +  +  V +  G    +A+  +G VY WG
Sbjct: 148 EVYAWGYNNCGQVGSGSTANQPTPRRVSSCLQNKV-AVGIVCGQTSSLAVVDNGEVYGWG 206

Query: 349 KGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLG 408
               G LG G+  ++  P  L +L+    +Q+         L D G +Y +G   +G LG
Sbjct: 207 YNGNGQLGLGNNGNQLTPCRLVALQGLCVLQIVCGYAHCLALSDEGVLYAWGSNTYGQLG 266

Query: 409 FPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVV-TDRGRLFGFG 455
               G     L P  + S +   V   +    HT    T  G+++ +G
Sbjct: 267 ---TGNKSNQLSPVQIMSEKERIVEVAACHSTHTSAAKTQSGQVYMWG 311


>gi|310824879|ref|YP_003957237.1| regulator of chromosome condensation [Stigmatella aurantiaca
           DW4/3-1]
 gi|309397951|gb|ADO75410.1| Regulator of chromosome condensation [Stigmatella aurantiaca
           DW4/3-1]
          Length = 775

 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 107/362 (29%), Positives = 160/362 (44%), Gaps = 26/362 (7%)

Query: 107 VETSAGNMQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHV 165
           V+  +G M +   + H+L + S+++V++ G +  G LG G    + V    +  P  + V
Sbjct: 418 VQGLSGVMAVAARQEHSLAVRSDATVWAWGRNYEGQLGDGTTRRREVP---VPVPKLSSV 474

Query: 166 VQVSASENHAAFVLQSGQVFTCGDNSSFCCGH-RDTNR--PIFRPRLVEALKGVPCKQVT 222
           V V+A   H+  V   G V+  GDN     G   +T+R  P+  P L   +       V 
Sbjct: 475 VAVAAGRYHSLAVRFDGTVWAWGDNEYGQVGDGTETSRKAPVRVPNLGGGVA------VA 528

Query: 223 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 282
           AG N +  L   G V   G N +GQLG+G T D P P  +  L      V +AAG  Y L
Sbjct: 529 AGENHSLVLRSDGTVWAWGGNHYGQLGNGITSDSPVPVQVQGLS---GGVAVAAGQYYSL 585

Query: 283 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
           AV  +G V+++G      LG G   D   P  +Q     G   V V+AG  H + + S G
Sbjct: 586 AVRSDGTVWAWGLNFEGQLGDGTASDSPVPVRVQVPGLSGG--VAVAAGTSHALVVRSDG 643

Query: 343 YVYTWGKGYCGALGHGDEIDKTL-PEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGW 401
            V+ WG  Y G +G G    + L P  +  L   +AV   A    +  +   GSV+ +G 
Sbjct: 644 TVWAWGSNYDGQVGEGAPRRRVLMPVQVQGLSEGMAV--AAGYNHSLAVRSDGSVWAWGG 701

Query: 402 MGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQ 461
              G LG    G +D+   P     L       ++ G  H++V+   G  +  G N   Q
Sbjct: 702 NTAGVLG---DGTTDRRTVPVQAQGLTGARA--VAAGESHSLVLRSDGTGWAMGSNASGQ 756

Query: 462 LG 463
           +G
Sbjct: 757 IG 758



 Score =  105 bits (263), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 107/371 (28%), Positives = 170/371 (45%), Gaps = 27/371 (7%)

Query: 111 AGNMQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS 169
           +G + +  G  H+L L S+ +V++ GS+  G LG G   T  VS   +       VV V+
Sbjct: 170 SGGVAVAAGGLHSLALRSDGTVWAWGSNFEGQLGDG---TTNVSLVPVRVKKLTGVVAVA 226

Query: 170 ASENHAAFVLQSGQVFTCGDNSSFCCGHRDT-NRPIFRPRLVEALKGVPCKQVTAGLNFT 228
           A E H+  V   G V+T G N     G   T +R +  P  V+ L G     V  G+  +
Sbjct: 227 AGEKHSLAVRSDGTVWTWGFNGYGALGDGTTSSRKV--PVQVQGLSG--GVAVAGGVYHS 282

Query: 229 GFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG--SVVQIAAGPSYMLAVTG 286
             +   G V   G+N  GQLG G     P  + + P++  G   V  +AAG S  LAV  
Sbjct: 283 LAVRSDGTVWGWGANGVGQLGDGT----PMRRVLVPVQAQGLSGVEAVAAGHSLSLAVRF 338

Query: 287 NGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH-VVRVSAGDEHVVALDSSGYVY 345
           +G V+++G  S   LG    +D ++  +    +  G+   V V A   H +A+ S G V+
Sbjct: 339 DGTVWAWGGNSYGALG----NDTIETMSTVPVQVPGLSGGVTVVAASSHALAVRSDGTVW 394

Query: 346 TWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFG 405
            WG  + G LG G   ++ +  P+  L   +A  V AR+  +  +    +V+ +G    G
Sbjct: 395 AWGGNHYGQLGDGTTSERLVAVPVQGLSGVMA--VAARQEHSLAVRSDATVWAWGRNYEG 452

Query: 406 SLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHD 465
            LG    G + +   P  +  L +  V  ++ G YH++ V   G ++ +GDNE  Q+G  
Sbjct: 453 QLG---DGTTRRREVPVPVPKLSS--VVAVAAGRYHSLAVRFDGTVWAWGDNEYGQVGDG 507

Query: 466 TLRGCLEPTEI 476
           T      P  +
Sbjct: 508 TETSRKAPVRV 518



 Score = 99.4 bits (246), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 104/372 (27%), Positives = 168/372 (45%), Gaps = 25/372 (6%)

Query: 122 HTLLIS---NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
           H+L ++   + +V++ G +  G LG+  +T + +S   +  P  +  V V A+ +HA  V
Sbjct: 330 HSLSLAVRFDGTVWAWGGNSYGALGN--DTIETMSTVPVQVPGLSGGVTVVAASSHALAV 387

Query: 179 LQSGQVFTCGDNSSFCCGHRDTN-RPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHV 237
              G V+  G N     G   T+ R +  P  V+ L GV    V A    +  +     V
Sbjct: 388 RSDGTVWAWGGNHYGQLGDGTTSERLVAVP--VQGLSGV--MAVAARQEHSLAVRSDATV 443

Query: 238 HTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 297
              G N  GQLG G T  R  P    P+ ++ SVV +AAG  + LAV  +G V+++G   
Sbjct: 444 WAWGRNYEGQLGDGTTRRREVP---VPVPKLSSVVAVAAGRYHSLAVRFDGTVWAWGDNE 500

Query: 298 NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 357
              +G G +     P  +          V V+AG+ H + L S G V+ WG  + G LG+
Sbjct: 501 YGQVGDGTETSRKAPVRVPNLGGG----VAVAAGENHSLVLRSDGTVWAWGGNHYGQLGN 556

Query: 358 GDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDK 417
           G   D  +P  +  L   +A  V A +  +  +   G+V+ +G    G LG  D   SD 
Sbjct: 557 GITSDSPVPVQVQGLSGGVA--VAAGQYYSLAVRSDGTVWAWGLNFEGQLG--DGTASDS 612

Query: 418 VLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDT-LRGCLEPTEI 476
            +  R+     +  V+ ++ G  H +VV   G ++ +G N   Q+G     R  L P + 
Sbjct: 613 PVPVRVQVPGLSGGVA-VAAGTSHALVVRSDGTVWAWGSNYDGQVGEGAPRRRVLMPVQ- 670

Query: 477 FIQEMEEDTGLA 488
            +Q + E   +A
Sbjct: 671 -VQGLSEGMAVA 681



 Score = 99.4 bits (246), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 91/311 (29%), Positives = 142/311 (45%), Gaps = 19/311 (6%)

Query: 114 MQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           + +  GRYH+L +  + +V++ G +  G +G G ET++      +  P+    V V+A E
Sbjct: 475 VAVAAGRYHSLAVRFDGTVWAWGDNEYGQVGDGTETSRKAP---VRVPNLGGGVAVAAGE 531

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDT-NRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
           NH+  +   G V+  G N     G+  T + P+  P  V+ L G     V AG  ++  +
Sbjct: 532 NHSLVLRSDGTVWAWGGNHYGQLGNGITSDSPV--PVQVQGLSG--GVAVAAGQYYSLAV 587

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
              G V   G N  GQLG G   D P P  +  +  +   V +AAG S+ L V  +G V+
Sbjct: 588 RSDGTVWAWGLNFEGQLGDGTASDSPVPVRVQ-VPGLSGGVAVAAGTSHALVVRSDGTVW 646

Query: 292 SFGSGSNFCLGHGEQHDE-LQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKG 350
           ++GS  +  +G G      L P  +Q         + V+AG  H +A+ S G V+ WG  
Sbjct: 647 AWGSNYDGQVGEGAPRRRVLMPVQVQGLSEG----MAVAAGYNHSLAVRSDGSVWAWGGN 702

Query: 351 YCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFP 410
             G LG G    +T+P     L    A  V A +  + VL   G+ +  G    G +G  
Sbjct: 703 TAGVLGDGTTDRRTVPVQAQGLTGARA--VAAGESHSLVLRSDGTGWAMGSNASGQIG-- 758

Query: 411 DRGVSDKVLRP 421
           D G + +V  P
Sbjct: 759 DGGPTQQVSTP 769



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 96/373 (25%), Positives = 166/373 (44%), Gaps = 23/373 (6%)

Query: 107 VETSAGNMQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHV 165
           V+   G + +  G  H+L + S+ +V++ G +  G LG G  +++ V    +     +  
Sbjct: 216 VKKLTGVVAVAAGEKHSLAVRSDGTVWTWGFNGYGALGDGTTSSRKVP---VQVQGLSGG 272

Query: 166 VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 225
           V V+    H+  V   G V+  G N     G     R +  P   + L GV  + V AG 
Sbjct: 273 VAVAGGVYHSLAVRSDGTVWGWGANGVGQLGDGTPMRRVLVPVQAQGLSGV--EAVAAGH 330

Query: 226 NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG--SVVQIAAGPSYMLA 283
           + +  +   G V   G N++G LG+ DT++     S  P++  G    V + A  S+ LA
Sbjct: 331 SLSLAVRFDGTVWAWGGNSYGALGN-DTIET---MSTVPVQVPGLSGGVTVVAASSHALA 386

Query: 284 VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 343
           V  +G V+++G      LG G   + L    +Q        V+ V+A  EH +A+ S   
Sbjct: 387 VRSDGTVWAWGGNHYGQLGDGTTSERLVAVPVQGLS----GVMAVAARQEHSLAVRSDAT 442

Query: 344 VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 403
           V+ WG+ Y G LG G    + +P P+  L S +A  V A +  +  +   G+V+ +G   
Sbjct: 443 VWAWGRNYEGQLGDGTTRRREVPVPVPKLSSVVA--VAAGRYHSLAVRFDGTVWAWGDNE 500

Query: 404 FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 463
           +G +G    G       P  + +L       ++ G  H++V+   G ++ +G N   QLG
Sbjct: 501 YGQVG---DGTETSRKAPVRVPNLGGG--VAVAAGENHSLVLRSDGTVWAWGGNHYGQLG 555

Query: 464 HDTLRGCLEPTEI 476
           +        P ++
Sbjct: 556 NGITSDSPVPVQV 568



 Score = 92.0 bits (227), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 101/389 (25%), Positives = 163/389 (41%), Gaps = 31/389 (7%)

Query: 107 VETSAGNMQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAH- 164
           V+  +G + +  G YH+L + S+ +V+  G++  G LG G          R+  P  A  
Sbjct: 266 VQGLSGGVAVAGGVYHSLAVRSDGTVWGWGANGVGQLGDG------TPMRRVLVPVQAQG 319

Query: 165 ---VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQV 221
              V  V+A  + +  V   G V+  G NS    G+         P  V  L G     V
Sbjct: 320 LSGVEAVAAGHSLSLAVRFDGTVWAWGGNSYGALGNDTIETMSTVPVQVPGLSG----GV 375

Query: 222 TAGLNFTGFLTIR--GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPS 279
           T     +  L +R  G V   G N +GQLG G T +R       P++ +  V+ +AA   
Sbjct: 376 TVVAASSHALAVRSDGTVWAWGGNHYGQLGDGTTSERLV---AVPVQGLSGVMAVAARQE 432

Query: 280 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 339
           + LAV  +  V+++G      LG G       P  +         VV V+AG  H +A+ 
Sbjct: 433 HSLAVRSDATVWAWGRNYEGQLGDGTTRRREVPVPVPKLS----SVVAVAAGRYHSLAVR 488

Query: 340 SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGF 399
             G V+ WG    G +G G E  +  P  + +L   +AV   A +  + VL   G+V+ +
Sbjct: 489 FDGTVWAWGDNEYGQVGDGTETSRKAPVRVPNLGGGVAV--AAGENHSLVLRSDGTVWAW 546

Query: 400 GWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNER 459
           G   +G LG    G++     P  +  L       ++ G Y+++ V   G ++ +G N  
Sbjct: 547 GGNHYGQLG---NGITSDSPVPVQVQGLSGG--VAVAAGQYYSLAVRSDGTVWAWGLNFE 601

Query: 460 AQLGHDTLRGCLEPTEIFIQEMEEDTGLA 488
            QLG  T      P  + +  +     +A
Sbjct: 602 GQLGDGTASDSPVPVRVQVPGLSGGVAVA 630



 Score = 82.4 bits (202), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 86/304 (28%), Positives = 135/304 (44%), Gaps = 23/304 (7%)

Query: 167 QVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN 226
           +++   NH+  V   G V+  G+N     G   T+     P  V+ L GV    V  G  
Sbjct: 75  RIATGANHSWAVRPDGTVWAVGENVFGQLGDGTTSERRV-PVQVQGLSGVVA--VAVGAY 131

Query: 227 FTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTG 286
            +  L   G V   G     Q G G   D   P   AP+  +   V +AAG  + LA+  
Sbjct: 132 HSLALRSDGTVWAVGRAAC-QGGDGTASDCTVP---APVPGLSGGVAVAAGGLHSLALRS 187

Query: 287 NGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYT 346
           +G V+++GS     LG G  +  L P  ++        VV V+AG++H +A+ S G V+T
Sbjct: 188 DGTVWAWGSNFEGQLGDGTTNVSLVPVRVKKL----TGVVAVAAGEKHSLAVRSDGTVWT 243

Query: 347 WGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGS 406
           WG    GALG G    + +P  +  L   +A  V      +  +   G+V+G+G  G G 
Sbjct: 244 WGFNGYGALGDGTTSSRKVPVQVQGLSGGVA--VAGGVYHSLAVRSDGTVWGWGANGVGQ 301

Query: 407 LGFPDRGVSDKVLRPRILDSLRAHHVS---QISTGLYHTVVVTDRGRLFGFGDNERAQLG 463
           LG       D     R+L  ++A  +S    ++ G   ++ V   G ++ +G N    LG
Sbjct: 302 LG-------DGTPMRRVLVPVQAQGLSGVEAVAAGHSLSLAVRFDGTVWAWGGNSYGALG 354

Query: 464 HDTL 467
           +DT+
Sbjct: 355 NDTI 358


>gi|115378347|ref|ZP_01465512.1| BNR repeat domain protein [Stigmatella aurantiaca DW4/3-1]
 gi|310825395|ref|YP_003957753.1| bnr repeat domain-containing protein [Stigmatella aurantiaca
           DW4/3-1]
 gi|115364660|gb|EAU63730.1| BNR repeat domain protein [Stigmatella aurantiaca DW4/3-1]
 gi|309398467|gb|ADO75926.1| BNR repeat domain protein [Stigmatella aurantiaca DW4/3-1]
          Length = 382

 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 102/355 (28%), Positives = 158/355 (44%), Gaps = 22/355 (6%)

Query: 114 MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           + ++ G  H+L + ++ SV++ G+S  G+   G  + +   F  +  P  + +V V+A  
Sbjct: 35  VPLSAGDSHSLAVHADGSVWAWGASASGLREEGALSRR---FAPVPVPGLSDIVSVAAGG 91

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            H+  V   G ++T G N     G   T      P  V  L GV  + V  GL  +  L 
Sbjct: 92  AHSLAVRADGTLWTWGGNPYGQLGDGTTTARAL-PVQVAGLSGV--RAVATGLGHSLALR 148

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
             G V   G N  GQLG G T    TP+   P+  +  V  +AAG  + L V  +  V++
Sbjct: 149 ADGTVWAWGLNQFGQLGDGTTSQWLTPR---PIPGLSGVRSVAAGGFHSLVVRDDDTVWA 205

Query: 293 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 352
           +GS     LG G       PRAI   R    +V  V+ G  H +A+ + G +  WG    
Sbjct: 206 WGSNDYGELGDGSTSRRAVPRAIPGLR----NVASVAGGCYHSLAVHADGTLSAWGLNSY 261

Query: 353 GALGHGDEIDKTLPEPLSSLKSHLAVQVCARKR-KTFVLVDTGSVYGFGWMGFGSLGFPD 411
           G LG G   ++  P P+  L     V+  A     +  L   G+V+ +G  G+G  G  D
Sbjct: 262 GQLGDGTFSNRATPRPVPGLS---GVRCVATSFFHSLALRAEGTVWAWGLNGYGEQG--D 316

Query: 412 RGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDT 466
              S +   PR +  L    V  ++TG +H++ V   G +  +G N + QLG  T
Sbjct: 317 GTASRQSPTPRPVPGLSG--VLSVATGTFHSLAVNTNGTVSAWGHNGQGQLGDGT 369



 Score = 81.6 bits (200), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 77/279 (27%), Positives = 120/279 (43%), Gaps = 15/279 (5%)

Query: 198 RDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRP 257
           R+  RP   P L  A +G P   ++AG + +  +   G V   G++  G    G    R 
Sbjct: 15  REVERPRSAPPLGRAGEG-PRVPLSAGDSHSLAVHADGSVWAWGASASGLREEGALSRRF 73

Query: 258 TPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQT 317
            P    P+  +  +V +AAG ++ LAV  +G ++++G      LG G       P  +Q 
Sbjct: 74  AP---VPVPGLSDIVSVAAGGAHSLAVRADGTLWTWGGNPYGQLGDGTTTARALP--VQV 128

Query: 318 FRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLA 377
               G+  V    G  H +AL + G V+ WG    G LG G       P P+  L     
Sbjct: 129 AGLSGVRAVATGLG--HSLALRADGTVWAWGLNQFGQLGDGTTSQWLTPRPIPGLSG--V 184

Query: 378 VQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIST 437
             V A    + V+ D  +V+ +G   +G LG    G + +   PR +  LR  +V+ ++ 
Sbjct: 185 RSVAAGGFHSLVVRDDDTVWAWGSNDYGELG---DGSTSRRAVPRAIPGLR--NVASVAG 239

Query: 438 GLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 476
           G YH++ V   G L  +G N   QLG  T      P  +
Sbjct: 240 GCYHSLAVHADGTLSAWGLNSYGQLGDGTFSNRATPRPV 278



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 90/312 (28%), Positives = 137/312 (43%), Gaps = 34/312 (10%)

Query: 104 SDIVETSAGNMQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSA 162
           SDIV  +AG         H+L + ++ ++++ G +  G LG G  T + +    +     
Sbjct: 82  SDIVSVAAGGA-------HSLAVRADGTLWTWGGNPYGQLGDGTTTARALP---VQVAGL 131

Query: 163 AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 222
           + V  V+    H+  +   G V+  G N     G   T++    PR +  L GV  + V 
Sbjct: 132 SGVRAVATGLGHSLALRADGTVWAWGLNQFGQLGDGTTSQ-WLTPRPIPGLSGV--RSVA 188

Query: 223 AGLNFTGF--LTIRGH--VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGP 278
           AG    GF  L +R    V   GSN +G+LG G T  R  P++I  L  V SV   A G 
Sbjct: 189 AG----GFHSLVVRDDDTVWAWGSNDYGELGDGSTSRRAVPRAIPGLRNVASV---AGGC 241

Query: 279 SYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVR-VSAGDEHVVA 337
            + LAV  +G + ++G  S   LG G   +   PR +      G+  VR V+    H +A
Sbjct: 242 YHSLAVHADGTLSAWGLNSYGQLGDGTFSNRATPRPV-----PGLSGVRCVATSFFHSLA 296

Query: 338 LDSSGYVYTWGKGYCGALGHGDEIDKT-LPEPLSSLKSHLAVQVCARKRKTFVLVDTGSV 396
           L + G V+ WG    G  G G    ++  P P+  L   L+V        +  +   G+V
Sbjct: 297 LRAEGTVWAWGLNGYGEQGDGTASRQSPTPRPVPGLSGVLSVATG--TFHSLAVNTNGTV 354

Query: 397 YGFGWMGFGSLG 408
             +G  G G LG
Sbjct: 355 SAWGHNGQGQLG 366



 Score = 68.9 bits (167), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 75/259 (28%), Positives = 120/259 (46%), Gaps = 17/259 (6%)

Query: 111 AGNMQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS 169
           +G   + TG  H+L L ++ +V++ G +  G LG G  T+Q ++   I  P  + V  V+
Sbjct: 132 SGVRAVATGLGHSLALRADGTVWAWGLNQFGQLGDG-TTSQWLTPRPI--PGLSGVRSVA 188

Query: 170 ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
           A   H+  V     V+  G N     G   T+R    PR +  L+ V    V  G   + 
Sbjct: 189 AGGFHSLVVRDDDTVWAWGSNDYGELGDGSTSRRAV-PRAIPGLRNV--ASVAGGCYHSL 245

Query: 230 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 289
            +   G +   G N++GQLG G   +R TP+   P+  +  V  +A    + LA+   G 
Sbjct: 246 AVHADGTLSAWGLNSYGQLGDGTFSNRATPR---PVPGLSGVRCVATSFFHSLALRAEGT 302

Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRR-KGIH-VVRVSAGDEHVVALDSSGYVYTW 347
           V+++G       G+GEQ D    R   T R   G+  V+ V+ G  H +A++++G V  W
Sbjct: 303 VWAWG-----LNGYGEQGDGTASRQSPTPRPVPGLSGVLSVATGTFHSLAVNTNGTVSAW 357

Query: 348 GKGYCGALGHGDEIDKTLP 366
           G    G LG G    ++ P
Sbjct: 358 GHNGQGQLGDGTATHRSTP 376


>gi|440791580|gb|ELR12818.1| regulator of chromosome condensation (RCC1) repeat domain
           containing protein [Acanthamoeba castellanii str. Neff]
          Length = 439

 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 91/269 (33%), Positives = 128/269 (47%), Gaps = 19/269 (7%)

Query: 207 PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHG-QLGHGDTLDRP------TP 259
           P  + AL+G+    V AG N + FLT  G V+ CG + +G QLG     +         P
Sbjct: 84  PARIGALRGLRIAAVAAGENHSLFLTDDGQVYACGVSLNGSQLGFAGCREEDLCQMHYVP 143

Query: 260 KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFR 319
           + ++ L++V  VV+IAAGP++ L +T    VYSFG      LG G+  +   P  ++  R
Sbjct: 144 ERVSGLDDV-VVVKIAAGPTHSLVLTSTAAVYSFGENRYGHLGLGDYENRWTPTLVEALR 202

Query: 320 RKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY-CGALGHGDEIDKTLPEPLSSLK-SHLA 377
             G  +V+V AGD +  A+  SG V+ WG    C  L   D    TL E LS    + +A
Sbjct: 203 --GEEIVQVVAGDTNSAAITKSGQVFMWGSCRSCIDLPSNDPTKPTLVEALSGTPIAAVA 260

Query: 378 VQVCARKRKTFVLVDTGSVYGFGWMGF--GSLGFPDRGVSDKVLR-PRILDSLRAHHVSQ 434
           +  C        L   G V   G   +  G LG+  R    K  R PR +        + 
Sbjct: 261 LGEC----HCLFLTTDGLVLSCGLDLYHSGLLGYDVRDNPRKEQRVPRPIPHFTGEVAAA 316

Query: 435 ISTGLYHTVVVTDRGRLFGFGDNERAQLG 463
           I+ G  H++V+T  GRLF FGDN   QLG
Sbjct: 317 IAAGEGHSLVLTRDGRLFAFGDNRSGQLG 345



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 100/361 (27%), Positives = 158/361 (43%), Gaps = 32/361 (8%)

Query: 141 VLGHG----PETTQCVSFT---RINFPSAAHVVQVSASENHAAFVLQSGQVFTCG----- 188
           VLGH     P + Q V +    RI       +  V+A ENH+ F+   GQV+ CG     
Sbjct: 64  VLGHPRQEEPSSHQGVRWAAPARIGALRGLRIAAVAAGENHSLFLTDDGQVYACGVSLNG 123

Query: 189 DNSSFC-CGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQ 247
               F  C   D  +  + P  V  L  V   ++ AG   +  LT    V++ G N +G 
Sbjct: 124 SQLGFAGCREEDLCQMHYVPERVSGLDDVVVVKIAAGPTHSLVLTSTAAVYSFGENRYGH 183

Query: 248 LGHGDTLDRPTPKSIAPL--EEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGE 305
           LG GD  +R TP  +  L  EE   +VQ+ AG +   A+T +G V+ +GS  + C+    
Sbjct: 184 LGLGDYENRWTPTLVEALRGEE---IVQVVAGDTNSAAITKSGQVFMWGSCRS-CIDL-P 238

Query: 306 QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKG--YCGALGH----GD 359
            +D  +P  ++     G  +  V+ G+ H + L + G V + G    + G LG+      
Sbjct: 239 SNDPTKPTLVEAL--SGTPIAAVALGECHCLFLTTDGLVLSCGLDLYHSGLLGYDVRDNP 296

Query: 360 EIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGF----PDRGVS 415
             ++ +P P+      +A  + A +  + VL   G ++ FG    G LG     P+  VS
Sbjct: 297 RKEQRVPRPIPHFTGEVAAAIAAGEGHSLVLTRDGRLFAFGDNRSGQLGLGRTSPELNVS 356

Query: 416 DKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTE 475
                P  + +L    V+ +     H+  +   G ++ FGD E  QLGH T      P +
Sbjct: 357 KPTELPSPVAALAHVQVAGVVAAPLHSCAIAHDGSVYSFGDGEFYQLGHGTTDSWNVPKK 416

Query: 476 I 476
           I
Sbjct: 417 I 417



 Score = 92.0 bits (227), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 88/294 (29%), Positives = 131/294 (44%), Gaps = 25/294 (8%)

Query: 114 MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           ++I  G  H+L L S ++V+S G +  G LG G    +    T +       +VQV A +
Sbjct: 155 VKIAAGPTHSLVLTSTAAVYSFGENRYGHLGLGDYENRWTP-TLVEALRGEEIVQVVAGD 213

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            ++A + +SGQVF  G   S  C    +N P  +P LVEAL G P   V  G     FLT
Sbjct: 214 TNSAAITKSGQVFMWGSCRS--CIDLPSNDPT-KPTLVEALSGTPIAAVALGECHCLFLT 270

Query: 233 IRGHVHTCGSNTH--GQLGHGDTLDRPTPKSIAPLE------EVGSVVQIAAGPSYMLAV 284
             G V +CG + +  G LG+ D  D P  +   P        EV +   IAAG  + L +
Sbjct: 271 TDGLVLSCGLDLYHSGLLGY-DVRDNPRKEQRVPRPIPHFTGEVAAA--IAAGEGHSLVL 327

Query: 285 TGNGVVYSFGSGSNFCLGHGEQHDELQ-------PRAIQTFRRKGIHVVRVSAGDEHVVA 337
           T +G +++FG   +  LG G    EL        P  +       + V  V A   H  A
Sbjct: 328 TRDGRLFAFGDNRSGQLGLGRTSPELNVSKPTELPSPVAALAH--VQVAGVVAAPLHSCA 385

Query: 338 LDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 391
           +   G VY++G G    LGHG      +P+ + +L       + + +  T  L+
Sbjct: 386 IAHDGSVYSFGDGEFYQLGHGTTDSWNVPKKIDALVPFFMTSIASTRAHTLALL 439


>gi|357609796|gb|EHJ66680.1| hypothetical protein KGM_08790 [Danaus plexippus]
          Length = 479

 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 95/352 (26%), Positives = 158/352 (44%), Gaps = 38/352 (10%)

Query: 122 HTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
           H++LIS     +S G + CG LG G  TT+ +    I      +++  +   NH+ FV  
Sbjct: 122 HSILISAEGEAYSFGRNSCGQLGFGDTTTRNIP-EPIPTLKGFNIIHAAVGRNHSLFVTD 180

Query: 181 SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTC 240
           +G V+ CGDN S  CG   T   I  P  V    G P  +V  G  F+  L   G +H+ 
Sbjct: 181 TGTVYACGDNKSAQCGLGHTTPQILVPTRVR-YTGAPIVKVGCGAEFSMILDCNGALHSF 239

Query: 241 GSNTHGQLGH---GDTLDRPT---------PKSIA------------PLEEVGSVVQIAA 276
           G   +GQLGH   G      T         PK IA            P+++V  +V  + 
Sbjct: 240 GLPEYGQLGHNTDGKYFVTSTKLSYHFEMVPKHIAFFFEKSKDGHVSPVKDV-DIVDFSC 298

Query: 277 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVV 336
           G ++ +A+      YS+G G    LGH EQ DE  PR I+ F  +   V  V  G  + +
Sbjct: 299 GNNHTVAIDSKKRAYSWGFGGFGRLGHAEQRDESVPRLIKYFDSQARGVRSVHCGATYSL 358

Query: 337 ALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSV 396
           A++  G ++ +G+      G  +      P+P+  L +   ++       + V+    S+
Sbjct: 359 AVNEHGALFMFGQ--TKRTGEAN----MYPKPVQDL-TGWNIRSVGTSNTSIVIAADDSL 411

Query: 397 YGFGWMG-FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTD 447
             +G    +G LG  D  ++    RP+ +  +   +++Q++ G  HT++++D
Sbjct: 412 IAWGVSPTYGELGTGD--INKSTARPKEVTRMEGLNITQVAMGYSHTLLLSD 461



 Score = 83.2 bits (204), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 66/222 (29%), Positives = 99/222 (44%), Gaps = 32/222 (14%)

Query: 171 SENHAAFVLQSGQVFTCGDNSSFCCGHRDTN-RPIFRPRLVEALKGVPCKQVTAGLNFTG 229
           S  H+  +   G+ ++ G NS    G  DT  R I  P  +  LKG        G N + 
Sbjct: 119 SAGHSILISAEGEAYSFGRNSCGQLGFGDTTTRNI--PEPIPTLKGFNIIHAAVGRNHSL 176

Query: 230 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP--LEEVGS-VVQIAAGPSYMLAVTG 286
           F+T  G V+ CG N   Q G G T    TP+ + P  +   G+ +V++  G  + + +  
Sbjct: 177 FVTDTGTVYACGDNKSAQCGLGHT----TPQILVPTRVRYTGAPIVKVGCGAEFSMILDC 232

Query: 287 NGVVYSFGSGSNFCLGHGEQ------------HDELQPRAIQTFRRKG----------IH 324
           NG ++SFG      LGH               H E+ P+ I  F  K           + 
Sbjct: 233 NGALHSFGLPEYGQLGHNTDGKYFVTSTKLSYHFEMVPKHIAFFFEKSKDGHVSPVKDVD 292

Query: 325 VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP 366
           +V  S G+ H VA+DS    Y+WG G  G LGH ++ D+++P
Sbjct: 293 IVDFSCGNNHTVAIDSKKRAYSWGFGGFGRLGHAEQRDESVP 334



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 40/142 (28%), Positives = 65/142 (45%), Gaps = 13/142 (9%)

Query: 329 SAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTF 388
           SAG  H + + + G  Y++G+  CG LG GD   + +PEP+ +LK    +     +  + 
Sbjct: 119 SAG--HSILISAEGEAYSFGRNSCGQLGFGDTTTRNIPEPIPTLKGFNIIHAAVGRNHSL 176

Query: 389 VLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHH----VSQISTGLYHTVV 444
            + DTG+VY  G       G            P+IL   R  +    + ++  G   +++
Sbjct: 177 FVTDTGTVYACGDNKSAQCGLGH-------TTPQILVPTRVRYTGAPIVKVGCGAEFSMI 229

Query: 445 VTDRGRLFGFGDNERAQLGHDT 466
           +   G L  FG  E  QLGH+T
Sbjct: 230 LDCNGALHSFGLPEYGQLGHNT 251



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 58/239 (24%), Positives = 94/239 (39%), Gaps = 34/239 (14%)

Query: 230 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 289
            ++  G  ++ G N+ GQLG GDT  R  P+ I  L+   +++  A G ++ L VT  G 
Sbjct: 125 LISAEGEAYSFGRNSCGQLGFGDTTTRNIPEPIPTLKGF-NIIHAAVGRNHSLFVTDTGT 183

Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 349
           VY+ G   +   G G  H   Q       R  G  +V+V  G E  + LD +G ++++G 
Sbjct: 184 VYACGDNKSAQCGLG--HTTPQILVPTRVRYTGAPIVKVGCGAEFSMILDCNGALHSFGL 241

Query: 350 GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGF 409
              G LGH  +                           + +  T   Y F  +      F
Sbjct: 242 PEYGQLGHNTD-------------------------GKYFVTSTKLSYHFEMVPKHIAFF 276

Query: 410 PDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLR 468
            ++     V   + +D      +   S G  HTV +  + R + +G     +LGH   R
Sbjct: 277 FEKSKDGHVSPVKDVD------IVDFSCGNNHTVAIDSKKRAYSWGFGGFGRLGHAEQR 329


>gi|313220445|emb|CBY31298.1| unnamed protein product [Oikopleura dioica]
          Length = 1097

 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 88/289 (30%), Positives = 141/289 (48%), Gaps = 31/289 (10%)

Query: 214 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDR---PTPKSIA---PLEE 267
           KG+    + +G   T  L +   V+  GSN  GQLG G  + R   P P   +   P++ 
Sbjct: 468 KGLNIMDIGSGDRHTLILDVNNVVYGVGSNDLGQLGFGSQMPRIENPEPVKFSTNRPVQA 527

Query: 268 VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDE-LQPRAIQTFRRKGIHVV 326
           +G+     A  S  L    N +V++ G+G N CLGHG +H   + P  +Q        VV
Sbjct: 528 IGT----GADFSVFLM---NKMVFTCGNGENGCLGHGSEHKSSMFPNMVQDL--ISYDVV 578

Query: 327 RVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRK 386
           ++SAG +HV+AL S G VY+WG G  G LGHG +  +  P  ++SL+  +  ++ A    
Sbjct: 579 KISAGYKHVLALTSDGDVYSWGCGELGRLGHGGQGSEFSPRKITSLQEKIK-EIYAGYDS 637

Query: 387 TFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLR------------PRILDSLRAHH-VS 433
           +F +  +G++Y  G      +G   R + D + R            P +   L ++  +S
Sbjct: 638 SFFIGISGNMYVCGSNRDNKIGLQKRSMLD-IFRLGHSRIPPYKDTPILSRQLNSNQTIS 696

Query: 434 QISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQEME 482
           +IS    HTVV+T  G+LF  G N   Q G +  R  ++ + I I +++
Sbjct: 697 KISQARDHTVVLTSTGQLFTMGRNSEGQRGLENSRSMIDCSPIQIPKID 745



 Score = 83.2 bits (204), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 66/259 (25%), Positives = 120/259 (46%), Gaps = 21/259 (8%)

Query: 114 MQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           M I +G  HTL++  N+ V+  GS+  G LG G +  +  +   + F +   V  +    
Sbjct: 473 MDIGSGDRHTLILDVNNVVYGVGSNDLGQLGFGSQMPRIENPEPVKFSTNRPVQAIGTGA 532

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
           + + F++    VFTCG+  + C GH   ++    P +V+ L      +++AG      LT
Sbjct: 533 DFSVFLMNK-MVFTCGNGENGCLGHGSEHKSSMFPNMVQDLISYDVVKISAGYKHVLALT 591

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAG--PSYMLAVTGNGVV 290
             G V++ G    G+LGHG      +P+ I  L+E   + +I AG   S+ + ++GN  +
Sbjct: 592 SDGDVYSWGCGELGRLGHGGQGSEFSPRKITSLQE--KIKEIYAGYDSSFFIGISGN--M 647

Query: 291 YSFGSGSNFCLGHGEQ---------HDELQPRAIQTFRRKGIH----VVRVSAGDEHVVA 337
           Y  GS  +  +G  ++         H  + P        + ++    + ++S   +H V 
Sbjct: 648 YVCGSNRDNKIGLQKRSMLDIFRLGHSRIPPYKDTPILSRQLNSNQTISKISQARDHTVV 707

Query: 338 LDSSGYVYTWGKGYCGALG 356
           L S+G ++T G+   G  G
Sbjct: 708 LTSTGQLFTMGRNSEGQRG 726



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 40/146 (27%), Positives = 69/146 (47%), Gaps = 4/146 (2%)

Query: 320 RKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTL-PEPLSSLKSHLAV 378
           +KG++++ + +GD H + LD +  VY  G    G LG G ++ +   PEP+    ++  V
Sbjct: 467 QKGLNIMDIGSGDRHTLILDVNNVVYGVGSNDLGQLGFGSQMPRIENPEPV-KFSTNRPV 525

Query: 379 QVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTG 438
           Q         V +    V+  G    G LG      S   + P ++  L ++ V +IS G
Sbjct: 526 QAIGTGADFSVFLMNKMVFTCGNGENGCLGHGSEHKSS--MFPNMVQDLISYDVVKISAG 583

Query: 439 LYHTVVVTDRGRLFGFGDNERAQLGH 464
             H + +T  G ++ +G  E  +LGH
Sbjct: 584 YKHVLALTSDGDVYSWGCGELGRLGH 609


>gi|335296869|ref|XP_003357882.1| PREDICTED: RCC1 and BTB domain-containing protein 1 [Sus scrofa]
          Length = 531

 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 78/255 (30%), Positives = 123/255 (48%), Gaps = 11/255 (4%)

Query: 230 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGSVVQIAAGPSYMLAVTGN 287
           ++T    V   G N    LG GD      PK +  L  +++ S+    +GP  +L+ T +
Sbjct: 36  YVTDNDEVFVFGLNYSNCLGTGDNQSTLVPKKLEALCGKKIKSL-SYGSGPHVLLS-TED 93

Query: 288 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGI-HVVRVSAGDEHVVALDSSGYVYT 346
           GVVY++G      LG+G  +  + P  IQ      I  VV V+ G  H +AL + G V+ 
Sbjct: 94  GVVYAWGHNGYSQLGNGTTNQGIAP--IQVCTNLLIKQVVEVACGSHHSMALAADGEVFA 151

Query: 347 WGKGYCGALGHGDEIDKTLPEPLSS-LKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFG 405
           WG   CG +G G   ++  P  +++ L     V +   +  +  ++D G VYG+G+ G G
Sbjct: 152 WGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVSIACGQTSSMAVLDNGEVYGWGYNGNG 211

Query: 406 SLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHD 465
            LG  + G     L P  + +L +  V+QI  G  HT+ +TD G L+ +G N   QLG  
Sbjct: 212 QLGLGNNG---NQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTG 268

Query: 466 TLRGCLEPTEIFIQE 480
                L P  I +++
Sbjct: 269 NKNNLLSPAHIMVEK 283



 Score = 91.7 bits (226), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 73/255 (28%), Positives = 119/255 (46%), Gaps = 12/255 (4%)

Query: 171 SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
           S N A +V  + +VF  G N S C G  D N+    P+ +EAL G   K ++ G      
Sbjct: 30  SANEALYVTDNDEVFVFGLNYSNCLGTGD-NQSTLVPKKLEALCGKKIKSLSYGSGPHVL 88

Query: 231 LTIR-GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 289
           L+   G V+  G N + QLG+G T     P  +     +  VV++A G  + +A+  +G 
Sbjct: 89  LSTEDGVVYAWGHNGYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGSHHSMALAADGE 148

Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAIQT---FRRKGIHVVRVSAGDEHVVALDSSGYVYT 346
           V+++G  +   +G G   ++  PR +      +R    VV ++ G    +A+  +G VY 
Sbjct: 149 VFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKR----VVSIACGQTSSMAVLDNGEVYG 204

Query: 347 WGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGS 406
           WG    G LG G+  ++  P  +++L S    Q+      T  L D G +Y +G   +G 
Sbjct: 205 WGYNGNGQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQ 264

Query: 407 LGFPDRGVSDKVLRP 421
           LG    G  + +L P
Sbjct: 265 LG---TGNKNNLLSP 276



 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 74/286 (25%), Positives = 116/286 (40%), Gaps = 5/286 (1%)

Query: 117 TTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS-ASENHA 175
           T+      +  N  VF  G +    LG G   +  V   ++       +  +S  S  H 
Sbjct: 29  TSANEALYVTDNDEVFVFGLNYSNCLGTGDNQSTLVP-KKLEALCGKKIKSLSYGSGPHV 87

Query: 176 AFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRG 235
               + G V+  G N     G+  TN+ I   ++   L      +V  G + +  L   G
Sbjct: 88  LLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGSHHSMALAADG 147

Query: 236 HVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 295
            V   G N  GQ+G G T ++PTP+ +     +  VV IA G +  +AV  NG VY +G 
Sbjct: 148 EVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVSIACGQTSSMAVLDNGEVYGWGY 207

Query: 296 GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGAL 355
             N  LG G   ++L P  +       + V ++  G  H +AL   G +Y WG    G L
Sbjct: 208 NGNGQLGLGNNGNQLTPVRVAALH--SVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQL 265

Query: 356 GHGDEIDKTLPEPLSSLKSHLA-VQVCARKRKTFVLVDTGSVYGFG 400
           G G++ +   P  +   K  +  +  C     +      G VY +G
Sbjct: 266 GTGNKNNLLSPAHIMVEKERVVEIAACHSAHTSAAKTQGGHVYMWG 311



 Score = 61.6 bits (148), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 56/184 (30%), Positives = 86/184 (46%), Gaps = 6/184 (3%)

Query: 114 MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +++  G +H++ L ++  VF+ G + CG +G G    Q       N      VV ++  +
Sbjct: 131 VEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVSIACGQ 190

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
             +  VL +G+V+  G N +   G    N     P  V AL  V   Q+  G   T  LT
Sbjct: 191 TSSMAVLDNGEVYGWGYNGNGQLG-LGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALT 249

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY--MLAVTGNGVV 290
             G ++  G+NT+GQLG G+  +  +P  I  + E   VV+IAA  S     A T  G V
Sbjct: 250 DEGLLYAWGANTYGQLGTGNKNNLLSPAHI--MVEKERVVEIAACHSAHTSAAKTQGGHV 307

Query: 291 YSFG 294
           Y +G
Sbjct: 308 YMWG 311


>gi|297274438|ref|XP_001101212.2| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 3
           [Macaca mulatta]
          Length = 519

 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 80/275 (29%), Positives = 122/275 (44%), Gaps = 5/275 (1%)

Query: 128 NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS-ASENHAAFVLQSGQVFT 186
           N  +F  G++ CG LG G +    +   R++  S   +  +S  S  H       G+VFT
Sbjct: 64  NDEIFVLGTNCCGCLGLG-DVQSTIEPRRLDSLSGKKIASLSYGSGPHIVLATTEGEVFT 122

Query: 187 CGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHG 246
            G N+    G+  TN  +   ++   L      +V  G   +  LT  G V   G N  G
Sbjct: 123 WGHNAYSQLGNGTTNHGLVPCQISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSG 182

Query: 247 QLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ 306
           Q+G G T+++P P+ +    +   VV IA G    +AV   G VY +G   N  LG G  
Sbjct: 183 QVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGSS 242

Query: 307 HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP 366
            +  QP   +    +GI V RV+ G  H + L   G VY WG    G LG G++ +++ P
Sbjct: 243 GN--QPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYP 300

Query: 367 EPLSSLKSH-LAVQVCARKRKTFVLVDTGSVYGFG 400
            P++  K   + +  C     +      G VY +G
Sbjct: 301 TPVTVEKDRIIEIAACHSTHTSAAKTQGGHVYMWG 335



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 81/283 (28%), Positives = 135/283 (47%), Gaps = 12/283 (4%)

Query: 203 PIFRPRLVEALKGV--PCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPK 260
           PIF     E L+ +   C   +AG N   + T+   +   G+N  G LG GD      P+
Sbjct: 32  PIFSLCSEEELQLIRQACVFGSAG-NEVLYTTVNDEIFVLGTNCCGCLGLGDVQSTIEPR 90

Query: 261 SIAPL--EEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTF 318
            +  L  +++ S+    +GP  +LA T  G V+++G  +   LG+G  +  L P  I T 
Sbjct: 91  RLDSLSGKKIASL-SYGSGPHIVLATT-EGEVFTWGHNAYSQLGNGTTNHGLVPCQIST- 147

Query: 319 RRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLS-SLKSHLA 377
                 V+ V+ G  H + L S G V+ WG    G +G G  +++ +P  ++  L++ + 
Sbjct: 148 NLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVV 207

Query: 378 VQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIST 437
           V +   +     +VDTG VY +G+ G G LG    G      R   L  +R   V +++ 
Sbjct: 208 VTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGSSGNQPTPCRVAALQGIR---VQRVAC 264

Query: 438 GLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQE 480
           G  HT+V+TD G+++ +G N   QLG         PT + +++
Sbjct: 265 GYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPVTVEK 307



 Score = 85.9 bits (211), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 66/237 (27%), Positives = 109/237 (45%), Gaps = 3/237 (1%)

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL- 231
           N   +   + ++F  G N   C G  D    I  PR +++L G     ++ G      L 
Sbjct: 56  NEVLYTTVNDEIFVLGTNCCGCLGLGDVQSTI-EPRRLDSLSGKKIASLSYGSGPHIVLA 114

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
           T  G V T G N + QLG+G T     P  I+       V+++A G  + L +T +G V+
Sbjct: 115 TTEGEVFTWGHNAYSQLGNGTTNHGLVPCQISTNLSNKQVIEVACGSYHSLVLTSDGEVF 174

Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 351
           ++G  ++  +G G   ++  PR +    +  + VV ++ G    +A+  +G VY WG   
Sbjct: 175 AWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKV-VVTIACGQMCCMAVVDTGEVYVWGYNG 233

Query: 352 CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLG 408
            G LG G   ++  P  +++L+     +V      T VL D G VY +G   +G LG
Sbjct: 234 NGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLG 290


>gi|115374764|ref|ZP_01462040.1| BNR repeat domain protein [Stigmatella aurantiaca DW4/3-1]
 gi|115368241|gb|EAU67200.1| BNR repeat domain protein [Stigmatella aurantiaca DW4/3-1]
          Length = 750

 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 107/362 (29%), Positives = 160/362 (44%), Gaps = 26/362 (7%)

Query: 107 VETSAGNMQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHV 165
           V+  +G M +   + H+L + S+++V++ G +  G LG G    + V    +  P  + V
Sbjct: 393 VQGLSGVMAVAARQEHSLAVRSDATVWAWGRNYEGQLGDGTTRRREVP---VPVPKLSSV 449

Query: 166 VQVSASENHAAFVLQSGQVFTCGDNSSFCCGH-RDTNR--PIFRPRLVEALKGVPCKQVT 222
           V V+A   H+  V   G V+  GDN     G   +T+R  P+  P L   +       V 
Sbjct: 450 VAVAAGRYHSLAVRFDGTVWAWGDNEYGQVGDGTETSRKAPVRVPNLGGGVA------VA 503

Query: 223 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 282
           AG N +  L   G V   G N +GQLG+G T D P P  +  L      V +AAG  Y L
Sbjct: 504 AGENHSLVLRSDGTVWAWGGNHYGQLGNGITSDSPVPVQVQGLS---GGVAVAAGQYYSL 560

Query: 283 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
           AV  +G V+++G      LG G   D   P  +Q     G   V V+AG  H + + S G
Sbjct: 561 AVRSDGTVWAWGLNFEGQLGDGTASDSPVPVRVQVPGLSGG--VAVAAGTSHALVVRSDG 618

Query: 343 YVYTWGKGYCGALGHGDEIDKTL-PEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGW 401
            V+ WG  Y G +G G    + L P  +  L   +AV   A    +  +   GSV+ +G 
Sbjct: 619 TVWAWGSNYDGQVGEGAPRRRVLMPVQVQGLSEGMAV--AAGYNHSLAVRSDGSVWAWGG 676

Query: 402 MGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQ 461
              G LG    G +D+   P     L       ++ G  H++V+   G  +  G N   Q
Sbjct: 677 NTAGVLG---DGTTDRRTVPVQAQGLTGARA--VAAGESHSLVLRSDGTGWAMGSNASGQ 731

Query: 462 LG 463
           +G
Sbjct: 732 IG 733



 Score =  105 bits (263), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 107/371 (28%), Positives = 170/371 (45%), Gaps = 27/371 (7%)

Query: 111 AGNMQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS 169
           +G + +  G  H+L L S+ +V++ GS+  G LG G   T  VS   +       VV V+
Sbjct: 145 SGGVAVAAGGLHSLALRSDGTVWAWGSNFEGQLGDG---TTNVSLVPVRVKKLTGVVAVA 201

Query: 170 ASENHAAFVLQSGQVFTCGDNSSFCCGHRDT-NRPIFRPRLVEALKGVPCKQVTAGLNFT 228
           A E H+  V   G V+T G N     G   T +R +  P  V+ L G     V  G+  +
Sbjct: 202 AGEKHSLAVRSDGTVWTWGFNGYGALGDGTTSSRKV--PVQVQGLSG--GVAVAGGVYHS 257

Query: 229 GFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG--SVVQIAAGPSYMLAVTG 286
             +   G V   G+N  GQLG G     P  + + P++  G   V  +AAG S  LAV  
Sbjct: 258 LAVRSDGTVWGWGANGVGQLGDGT----PMRRVLVPVQAQGLSGVEAVAAGHSLSLAVRF 313

Query: 287 NGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH-VVRVSAGDEHVVALDSSGYVY 345
           +G V+++G  S   LG    +D ++  +    +  G+   V V A   H +A+ S G V+
Sbjct: 314 DGTVWAWGGNSYGALG----NDTIETMSTVPVQVPGLSGGVTVVAASSHALAVRSDGTVW 369

Query: 346 TWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFG 405
            WG  + G LG G   ++ +  P+  L   +A  V AR+  +  +    +V+ +G    G
Sbjct: 370 AWGGNHYGQLGDGTTSERLVAVPVQGLSGVMA--VAARQEHSLAVRSDATVWAWGRNYEG 427

Query: 406 SLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHD 465
            LG    G + +   P  +  L +  V  ++ G YH++ V   G ++ +GDNE  Q+G  
Sbjct: 428 QLG---DGTTRRREVPVPVPKLSS--VVAVAAGRYHSLAVRFDGTVWAWGDNEYGQVGDG 482

Query: 466 TLRGCLEPTEI 476
           T      P  +
Sbjct: 483 TETSRKAPVRV 493



 Score = 99.4 bits (246), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 104/372 (27%), Positives = 168/372 (45%), Gaps = 25/372 (6%)

Query: 122 HTLLIS---NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
           H+L ++   + +V++ G +  G LG+  +T + +S   +  P  +  V V A+ +HA  V
Sbjct: 305 HSLSLAVRFDGTVWAWGGNSYGALGN--DTIETMSTVPVQVPGLSGGVTVVAASSHALAV 362

Query: 179 LQSGQVFTCGDNSSFCCGHRDTN-RPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHV 237
              G V+  G N     G   T+ R +  P  V+ L GV    V A    +  +     V
Sbjct: 363 RSDGTVWAWGGNHYGQLGDGTTSERLVAVP--VQGLSGV--MAVAARQEHSLAVRSDATV 418

Query: 238 HTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 297
              G N  GQLG G T  R  P    P+ ++ SVV +AAG  + LAV  +G V+++G   
Sbjct: 419 WAWGRNYEGQLGDGTTRRREVP---VPVPKLSSVVAVAAGRYHSLAVRFDGTVWAWGDNE 475

Query: 298 NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 357
              +G G +     P  +          V V+AG+ H + L S G V+ WG  + G LG+
Sbjct: 476 YGQVGDGTETSRKAPVRVPNLGGG----VAVAAGENHSLVLRSDGTVWAWGGNHYGQLGN 531

Query: 358 GDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDK 417
           G   D  +P  +  L   +A  V A +  +  +   G+V+ +G    G LG  D   SD 
Sbjct: 532 GITSDSPVPVQVQGLSGGVA--VAAGQYYSLAVRSDGTVWAWGLNFEGQLG--DGTASDS 587

Query: 418 VLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDT-LRGCLEPTEI 476
            +  R+     +  V+ ++ G  H +VV   G ++ +G N   Q+G     R  L P + 
Sbjct: 588 PVPVRVQVPGLSGGVA-VAAGTSHALVVRSDGTVWAWGSNYDGQVGEGAPRRRVLMPVQ- 645

Query: 477 FIQEMEEDTGLA 488
            +Q + E   +A
Sbjct: 646 -VQGLSEGMAVA 656



 Score = 99.0 bits (245), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 91/311 (29%), Positives = 142/311 (45%), Gaps = 19/311 (6%)

Query: 114 MQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           + +  GRYH+L +  + +V++ G +  G +G G ET++      +  P+    V V+A E
Sbjct: 450 VAVAAGRYHSLAVRFDGTVWAWGDNEYGQVGDGTETSRKAP---VRVPNLGGGVAVAAGE 506

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDT-NRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
           NH+  +   G V+  G N     G+  T + P+  P  V+ L G     V AG  ++  +
Sbjct: 507 NHSLVLRSDGTVWAWGGNHYGQLGNGITSDSPV--PVQVQGLSG--GVAVAAGQYYSLAV 562

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
              G V   G N  GQLG G   D P P  +  +  +   V +AAG S+ L V  +G V+
Sbjct: 563 RSDGTVWAWGLNFEGQLGDGTASDSPVPVRVQ-VPGLSGGVAVAAGTSHALVVRSDGTVW 621

Query: 292 SFGSGSNFCLGHGEQHDE-LQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKG 350
           ++GS  +  +G G      L P  +Q         + V+AG  H +A+ S G V+ WG  
Sbjct: 622 AWGSNYDGQVGEGAPRRRVLMPVQVQGLSEG----MAVAAGYNHSLAVRSDGSVWAWGGN 677

Query: 351 YCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFP 410
             G LG G    +T+P     L    A  V A +  + VL   G+ +  G    G +G  
Sbjct: 678 TAGVLGDGTTDRRTVPVQAQGLTGARA--VAAGESHSLVLRSDGTGWAMGSNASGQIG-- 733

Query: 411 DRGVSDKVLRP 421
           D G + +V  P
Sbjct: 734 DGGPTQQVSTP 744



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 96/373 (25%), Positives = 166/373 (44%), Gaps = 23/373 (6%)

Query: 107 VETSAGNMQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHV 165
           V+   G + +  G  H+L + S+ +V++ G +  G LG G  +++ V    +     +  
Sbjct: 191 VKKLTGVVAVAAGEKHSLAVRSDGTVWTWGFNGYGALGDGTTSSRKVP---VQVQGLSGG 247

Query: 166 VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 225
           V V+    H+  V   G V+  G N     G     R +  P   + L GV  + V AG 
Sbjct: 248 VAVAGGVYHSLAVRSDGTVWGWGANGVGQLGDGTPMRRVLVPVQAQGLSGV--EAVAAGH 305

Query: 226 NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG--SVVQIAAGPSYMLA 283
           + +  +   G V   G N++G LG+ DT++     S  P++  G    V + A  S+ LA
Sbjct: 306 SLSLAVRFDGTVWAWGGNSYGALGN-DTIET---MSTVPVQVPGLSGGVTVVAASSHALA 361

Query: 284 VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 343
           V  +G V+++G      LG G   + L    +Q        V+ V+A  EH +A+ S   
Sbjct: 362 VRSDGTVWAWGGNHYGQLGDGTTSERLVAVPVQGLS----GVMAVAARQEHSLAVRSDAT 417

Query: 344 VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 403
           V+ WG+ Y G LG G    + +P P+  L S +A  V A +  +  +   G+V+ +G   
Sbjct: 418 VWAWGRNYEGQLGDGTTRRREVPVPVPKLSSVVA--VAAGRYHSLAVRFDGTVWAWGDNE 475

Query: 404 FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 463
           +G +G    G       P  + +L       ++ G  H++V+   G ++ +G N   QLG
Sbjct: 476 YGQVG---DGTETSRKAPVRVPNLGGG--VAVAAGENHSLVLRSDGTVWAWGGNHYGQLG 530

Query: 464 HDTLRGCLEPTEI 476
           +        P ++
Sbjct: 531 NGITSDSPVPVQV 543



 Score = 92.0 bits (227), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 101/389 (25%), Positives = 163/389 (41%), Gaps = 31/389 (7%)

Query: 107 VETSAGNMQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAH- 164
           V+  +G + +  G YH+L + S+ +V+  G++  G LG G          R+  P  A  
Sbjct: 241 VQGLSGGVAVAGGVYHSLAVRSDGTVWGWGANGVGQLGDG------TPMRRVLVPVQAQG 294

Query: 165 ---VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQV 221
              V  V+A  + +  V   G V+  G NS    G+         P  V  L G     V
Sbjct: 295 LSGVEAVAAGHSLSLAVRFDGTVWAWGGNSYGALGNDTIETMSTVPVQVPGLSG----GV 350

Query: 222 TAGLNFTGFLTIR--GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPS 279
           T     +  L +R  G V   G N +GQLG G T +R       P++ +  V+ +AA   
Sbjct: 351 TVVAASSHALAVRSDGTVWAWGGNHYGQLGDGTTSERLV---AVPVQGLSGVMAVAARQE 407

Query: 280 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 339
           + LAV  +  V+++G      LG G       P  +         VV V+AG  H +A+ 
Sbjct: 408 HSLAVRSDATVWAWGRNYEGQLGDGTTRRREVPVPVPKLS----SVVAVAAGRYHSLAVR 463

Query: 340 SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGF 399
             G V+ WG    G +G G E  +  P  + +L   +AV   A +  + VL   G+V+ +
Sbjct: 464 FDGTVWAWGDNEYGQVGDGTETSRKAPVRVPNLGGGVAV--AAGENHSLVLRSDGTVWAW 521

Query: 400 GWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNER 459
           G   +G LG    G++     P  +  L       ++ G Y+++ V   G ++ +G N  
Sbjct: 522 GGNHYGQLG---NGITSDSPVPVQVQGLSGG--VAVAAGQYYSLAVRSDGTVWAWGLNFE 576

Query: 460 AQLGHDTLRGCLEPTEIFIQEMEEDTGLA 488
            QLG  T      P  + +  +     +A
Sbjct: 577 GQLGDGTASDSPVPVRVQVPGLSGGVAVA 605



 Score = 82.0 bits (201), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 87/304 (28%), Positives = 136/304 (44%), Gaps = 23/304 (7%)

Query: 167 QVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN 226
           +++   NH+  V   G V+  G+N     G   T+     P  V+ L GV    V  G  
Sbjct: 50  RIATGANHSWAVRPDGTVWAVGENVFGQLGDGTTSERRV-PVQVQGLSGVVA--VAVGAY 106

Query: 227 FTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTG 286
            +  L   G V   G     Q G G   D   P   AP+  +   V +AAG  + LA+  
Sbjct: 107 HSLALRSDGTVWAVGRAAC-QGGDGTASDCTVP---APVPGLSGGVAVAAGGLHSLALRS 162

Query: 287 NGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYT 346
           +G V+++GS     LG G  +  L P  +    +K   VV V+AG++H +A+ S G V+T
Sbjct: 163 DGTVWAWGSNFEGQLGDGTTNVSLVPVRV----KKLTGVVAVAAGEKHSLAVRSDGTVWT 218

Query: 347 WGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGS 406
           WG    GALG G    + +P  +  L   +A  V      +  +   G+V+G+G  G G 
Sbjct: 219 WGFNGYGALGDGTTSSRKVPVQVQGLSGGVA--VAGGVYHSLAVRSDGTVWGWGANGVGQ 276

Query: 407 LGFPDRGVSDKVLRPRILDSLRAHHVS---QISTGLYHTVVVTDRGRLFGFGDNERAQLG 463
           LG       D     R+L  ++A  +S    ++ G   ++ V   G ++ +G N    LG
Sbjct: 277 LG-------DGTPMRRVLVPVQAQGLSGVEAVAAGHSLSLAVRFDGTVWAWGGNSYGALG 329

Query: 464 HDTL 467
           +DT+
Sbjct: 330 NDTI 333


>gi|330837741|ref|YP_004412382.1| hypothetical protein [Sphaerochaeta coccoides DSM 17374]
 gi|329749644|gb|AEC03000.1| hypothetical protein Spico_1802 [Sphaerochaeta coccoides DSM 17374]
          Length = 733

 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 103/364 (28%), Positives = 164/364 (45%), Gaps = 25/364 (6%)

Query: 116 ITTGRYHTLLI-SNSSVFSCGSSLCGVLG------HGPETTQCVSFTRINFPS-AAHVVQ 167
           ++ G YHT+++ ++ +++  G +  G LG       G E T    +   N      +V  
Sbjct: 363 VSAGGYHTMILKTDGTLWGVGYNDNGELGIGTSGDMGNERTPVQVWDSTNGSRFMTNVAA 422

Query: 168 VSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG-----VPCKQVT 222
           VSA  ++   + + G ++  G N     G   T   I  P  V+A           K V+
Sbjct: 423 VSAGWDYTMILKKDGTLWGTGHNYYGQLGIGGTTD-ISTPEQVKASTADNDFMTNVKAVS 481

Query: 223 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS-VVQIAAGPSYM 281
           AG   T  L   G +   G N HGQLG G+   + TP    P+  +G+ V  + AG  + 
Sbjct: 482 AGQEHTMILKKDGTLWATGDNQHGQLGIGNYEAKDTP---VPVSSMGNQVAAVFAGELHT 538

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGI--HVVRVSAGDEHVVALD 339
           + +  NG +++ G  ++  LG G   D   P  ++     G+   V  VSAG +H + L 
Sbjct: 539 MILKKNGTLWATGYNASGQLGIGGTTDISTPEQVKGLGGAGVMTDVAAVSAGWKHTMILK 598

Query: 340 SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGF 399
           + G ++  G    G LG G+   K  P P+SS+ + +A  V A +  T +L   G+++  
Sbjct: 599 TDGTLWATGDNQHGQLGIGNYEAKDTPVPVSSMGNQVAA-VFAGEEYTMILKKDGTLWAT 657

Query: 400 GWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNER 459
           G   FG LG  D    D    P  + S+    V  +S G  HT+++   G L+  GDNE 
Sbjct: 658 GSNQFGRLGVGDYADKDT---PVPVSSM-GSDVKDVSAGYGHTMILKKDGTLWATGDNEY 713

Query: 460 AQLG 463
            QLG
Sbjct: 714 GQLG 717



 Score = 74.7 bits (182), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 73/262 (27%), Positives = 118/262 (45%), Gaps = 18/262 (6%)

Query: 116 ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAH-VVQVSASEN 173
           ++ G+ HT+++  + ++++ G +  G LG G    +    T +   S  + V  V A E 
Sbjct: 480 VSAGQEHTMILKKDGTLWATGDNQHGQLGIGNYEAKD---TPVPVSSMGNQVAAVFAGEL 536

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGV----PCKQVTAGLNFTG 229
           H   + ++G ++  G N+S   G   T   I  P  V+ L G         V+AG   T 
Sbjct: 537 HTMILKKNGTLWATGYNASGQLGIGGTTD-ISTPEQVKGLGGAGVMTDVAAVSAGWKHTM 595

Query: 230 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS-VVQIAAGPSYMLAVTGNG 288
            L   G +   G N HGQLG G+   + TP    P+  +G+ V  + AG  Y + +  +G
Sbjct: 596 ILKTDGTLWATGDNQHGQLGIGNYEAKDTP---VPVSSMGNQVAAVFAGEEYTMILKKDG 652

Query: 289 VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 348
            +++ GS     LG G+  D+  P  + +    G  V  VSAG  H + L   G ++  G
Sbjct: 653 TLWATGSNQFGRLGVGDYADKDTPVPVSSM---GSDVKDVSAGYGHTMILKKDGTLWATG 709

Query: 349 KGYCGALGHGD-EIDKTLPEPL 369
               G LG G   I+   P P+
Sbjct: 710 DNEYGQLGDGSTNINSNTPVPV 731


>gi|225466229|ref|XP_002267377.1| PREDICTED: uncharacterized protein LOC100253065 [Vitis vinifera]
          Length = 1023

 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 87/294 (29%), Positives = 135/294 (45%), Gaps = 26/294 (8%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V ++S    HAA V + G+VF  G+ S    GH+  N  +  P++VE+L GV  K V+ G
Sbjct: 309 VREISLGGKHAALVTKHGEVFCWGEGSGGRLGHK-VNMDMGNPKIVESLTGVLVKSVSCG 367

Query: 225 LNFTGFLTIRGHVHTCGSNTHG--QLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 282
              T  LT  G ++T G N  G   +G      +  P  ++      S+  +A G  +M 
Sbjct: 368 EYQTCALTHSGELYTWGDNGSGIDLVGERRKRSQWIPSRLSGPLNGTSISNVACGEWHMA 427

Query: 283 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL---- 338
            V+ +G ++++G G+   LGHG+     QP+ +++    G+ V   + G  H  A+    
Sbjct: 428 IVSTSGQLFTYGDGTFGVLGHGKLESISQPKEVESL--SGLWVKAAACGPWHTAAIVEVR 485

Query: 339 -------DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 391
                     G ++TWG G  G LGHGD+  K LP  ++ L  H  VQV   +  T  L 
Sbjct: 486 ADRLKFNTKGGKLFTWGDGDKGRLGHGDQERKLLPTCVAQLVDHDFVQVSCGRMLTVGLT 545

Query: 392 DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVV 445
             G+VY  G +G       DR        P +++ LR   V  I+ G   T  +
Sbjct: 546 CLGTVYTMGRLG----DTEDRN------SPAVVEELRYRQVESIACGSGFTAAI 589



 Score = 77.4 bits (189), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 53/187 (28%), Positives = 87/187 (46%), Gaps = 8/187 (4%)

Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 349
           VY FG+       +G Q D L P+ +++     + V  +S G +H   +   G V+ WG+
Sbjct: 282 VYRFGNQ------NGMQSDALLPKLLESTTM--LDVREISLGGKHAALVTKHGEVFCWGE 333

Query: 350 GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGF 409
           G  G LGH   +D   P+ + SL   L   V   + +T  L  +G +Y +G  G G    
Sbjct: 334 GSGGRLGHKVNMDMGNPKIVESLTGVLVKSVSCGEYQTCALTHSGELYTWGDNGSGIDLV 393

Query: 410 PDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG 469
            +R    + +  R+   L    +S ++ G +H  +V+  G+LF +GD     LGH  L  
Sbjct: 394 GERRKRSQWIPSRLSGPLNGTSISNVACGEWHMAIVSTSGQLFTYGDGTFGVLGHGKLES 453

Query: 470 CLEPTEI 476
             +P E+
Sbjct: 454 ISQPKEV 460



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 63/218 (28%), Positives = 101/218 (46%), Gaps = 19/218 (8%)

Query: 271 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 330
           V +I+ G  +   VT +G V+ +G GS   LGH    D   P+ +++    G+ V  VS 
Sbjct: 309 VREISLGGKHAALVTKHGEVFCWGEGSGGRLGHKVNMDMGNPKIVESL--TGVLVKSVSC 366

Query: 331 GDEHVVALDSSGYVYTWGKGYCGA--LGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTF 388
           G+    AL  SG +YTWG    G   +G   +  + +P  LS   +  ++   A      
Sbjct: 367 GEYQTCALTHSGELYTWGDNGSGIDLVGERRKRSQWIPSRLSGPLNGTSISNVACGEWHM 426

Query: 389 VLVDT-GSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVV-- 445
            +V T G ++ +G   FG LG    G  + + +P+ ++SL    V   + G +HT  +  
Sbjct: 427 AIVSTSGQLFTYGDGTFGVLG---HGKLESISQPKEVESLSGLWVKAAACGPWHTAAIVE 483

Query: 446 --TDR-------GRLFGFGDNERAQLGHDTLRGCLEPT 474
              DR       G+LF +GD ++ +LGH      L PT
Sbjct: 484 VRADRLKFNTKGGKLFTWGDGDKGRLGHGDQERKLLPT 521



 Score = 72.4 bits (176), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 68/262 (25%), Positives = 117/262 (44%), Gaps = 18/262 (6%)

Query: 207 PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 266
           P+L+E+   +  ++++ G      +T  G V   G  + G+LGH   +D   PK +  L 
Sbjct: 298 PKLLESTTMLDVREISLGGKHAALVTKHGEVFCWGEGSGGRLGHKVNMDMGNPKIVESLT 357

Query: 267 EVGSVVQIAAGPSYMLAVTGNGVVYSFG-SGSNFCL-GHGEQHDELQPRAIQTFRRKGIH 324
            V  V  ++ G     A+T +G +Y++G +GS   L G   +  +  P  + +    G  
Sbjct: 358 GV-LVKSVSCGEYQTCALTHSGELYTWGDNGSGIDLVGERRKRSQWIPSRL-SGPLNGTS 415

Query: 325 VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKS---------- 374
           +  V+ G+ H+  + +SG ++T+G G  G LGHG     + P+ + SL            
Sbjct: 416 ISNVACGEWHMAIVSTSGQLFTYGDGTFGVLGHGKLESISQPKEVESLSGLWVKAAACGP 475

Query: 375 -HLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVS 433
            H A  V  R  +       G ++ +G    G LG  D+   ++ L P  +  L  H   
Sbjct: 476 WHTAAIVEVRADRLKFNTKGGKLFTWGDGDKGRLGHGDQ---ERKLLPTCVAQLVDHDFV 532

Query: 434 QISTGLYHTVVVTDRGRLFGFG 455
           Q+S G   TV +T  G ++  G
Sbjct: 533 QVSCGRMLTVGLTCLGTVYTMG 554



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 53/182 (29%), Positives = 77/182 (42%), Gaps = 24/182 (13%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPS-----A 162
           +  G +H  ++S S  +F+ G    GVLGHG       P+  + +S   +   +      
Sbjct: 419 VACGEWHMAIVSTSGQLFTYGDGTFGVLGHGKLESISQPKEVESLSGLWVKAAACGPWHT 478

Query: 163 AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 222
           A +V+V A  +   F  + G++FT GD      GH D  R +  P  V  L      QV+
Sbjct: 479 AAIVEVRA--DRLKFNTKGGKLFTWGDGDKGRLGHGDQERKLL-PTCVAQLVDHDFVQVS 535

Query: 223 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 282
            G   T  LT  G V+T G         GDT DR +P  +  L     V  IA G  +  
Sbjct: 536 CGRMLTVGLTCLGTVYTMGR-------LGDTEDRNSPAVVEEL-RYRQVESIACGSGFTA 587

Query: 283 AV 284
           A+
Sbjct: 588 AI 589


>gi|363733282|ref|XP_420476.3| PREDICTED: E3 ISG15--protein ligase HERC5 [Gallus gallus]
          Length = 560

 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 67/208 (32%), Positives = 114/208 (54%), Gaps = 5/208 (2%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           +VQ++  ++H+  + + G +FT G N+    G    +  I +P+LV+ LKG+P  Q+ AG
Sbjct: 85  IVQIACGDHHSMALSRGGSLFTWGQNTHGQLGVGSQDLLISKPQLVKGLKGIPLAQIAAG 144

Query: 225 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 284
              +  +++ G V++ G N  GQLG G T DR  P  +  LE   +V  I+ G  +   +
Sbjct: 145 GAHSVVVSLSGAVYSWGKNDFGQLGLGHTEDRDCPSYVEALEHWKAVF-ISCGEDHTAVL 203

Query: 285 TGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEH-VVALDSSGY 343
           + NG+V++FG+G    LGH    +E +PR +      G  V  V+ G +H +V + S   
Sbjct: 204 SKNGLVFTFGAGGAGQLGHNSTRNEFRPRMVAELW--GARVSLVACGRQHTLVYVPSLDK 261

Query: 344 VYTWGKGYCGALGHGDEIDKTLPEPLSS 371
           VY++G  Y G LG   + ++ +P P++S
Sbjct: 262 VYSFG-SYEGQLGSERKANQLIPLPINS 288



 Score = 88.6 bits (218), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 70/213 (32%), Positives = 108/213 (50%), Gaps = 10/213 (4%)

Query: 267 EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDEL--QPRAIQTFRRKGIH 324
           E   +VQIA G  + +A++  G ++++G  ++  LG G Q D L  +P+ ++    KGI 
Sbjct: 81  ENNDIVQIACGDHHSMALSRGGSLFTWGQNTHGQLGVGSQ-DLLISKPQLVKGL--KGIP 137

Query: 325 VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARK 384
           + +++AG  H V +  SG VY+WGK   G LG G   D+  P  + +L+   AV +   +
Sbjct: 138 LAQIAAGGAHSVVVSLSGAVYSWGKNDFGQLGLGHTEDRDCPSYVEALEHWKAVFISCGE 197

Query: 385 RKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV 444
             T VL   G V+ FG  G G LG      +    RPR++  L    VS ++ G  HT+V
Sbjct: 198 DHTAVLSKNGLVFTFGAGGAGQLG---HNSTRNEFRPRMVAELWGARVSLVACGRQHTLV 254

Query: 445 -VTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 476
            V    +++ FG  E  QLG +     L P  I
Sbjct: 255 YVPSLDKVYSFGSYE-GQLGSERKANQLIPLPI 286



 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 68/249 (27%), Positives = 111/249 (44%), Gaps = 18/249 (7%)

Query: 156 RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRP--IFRPRLVEAL 213
           R+ F     V  ++  E H       G+++ C            T  P    + RLV+ L
Sbjct: 32  RVWFKGKEKVWCLNCDETHVLVCSCDGKLYECW-----------TTAPGKTSKLRLVKEL 80

Query: 214 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVV 272
           +     Q+  G + +  L+  G + T G NTHGQLG G   L    P+ +  L+ +  + 
Sbjct: 81  ENNDIVQIACGDHHSMALSRGGSLFTWGQNTHGQLGVGSQDLLISKPQLVKGLKGI-PLA 139

Query: 273 QIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGD 332
           QIAAG ++ + V+ +G VYS+G      LG G   D   P  ++         V +S G+
Sbjct: 140 QIAAGGAHSVVVSLSGAVYSWGKNDFGQLGLGHTEDRDCPSYVEALEH--WKAVFISCGE 197

Query: 333 EHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK-SHLAVQVCARKRKTFVLV 391
           +H   L  +G V+T+G G  G LGH    ++  P  ++ L  + +++  C R+     + 
Sbjct: 198 DHTAVLSKNGLVFTFGAGGAGQLGHNSTRNEFRPRMVAELWGARVSLVACGRQHTLVYVP 257

Query: 392 DTGSVYGFG 400
               VY FG
Sbjct: 258 SLDKVYSFG 266


>gi|291539013|emb|CBL12124.1| Fibronectin type III domain./Regulator of chromosome condensation
            (RCC1) repeat [Roseburia intestinalis XB6B4]
          Length = 1546

 Score =  107 bits (267), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 99/364 (27%), Positives = 165/364 (45%), Gaps = 33/364 (9%)

Query: 116  ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
            ++ G YH+ +I+ + S++  G +  G +G G  T      T+I      HVV VS  + +
Sbjct: 744  LSLGDYHSGVIAQDGSLYMWGVNDFGQIGDG-TTKNRYKPTKI----LDHVVSVSLGDYY 798

Query: 175  AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 234
            +  + Q G ++  G N     G   T       ++++ +  V     + G   +G +T  
Sbjct: 799  SGAITQDGSLYMWGSNVYGQIGDGTTEDRYKPTKILDHVIAV-----SLGYCHSGAITQD 853

Query: 235  GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 294
            G ++  GSN  GQ+G G T DR  P  I     +  V+ ++ G S+  A+T +G +Y +G
Sbjct: 854  GSLYMWGSNDSGQIGDGTTEDRYKPTKI-----LDHVIAVSLGVSHSGAITQDGSLYMWG 908

Query: 295  SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGA 354
            S S   +G G      +P  I        HV+ VS    +  A+   G +Y WG    G 
Sbjct: 909  SNSRGGIGDGTTEVRYKPTKILD------HVIAVSLQTGNSGAITQDGSLYMWGSNVYGE 962

Query: 355  LGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGV 414
            +G G E D+  P   + +  H+ + V      +  +   GS+Y +G   +G +G  D   
Sbjct: 963  IGDGTEEDRYKP---TKILDHV-IAVSLGDDHSGAITQDGSLYMWGRNYYGEIG--DGTE 1016

Query: 415  SDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPT 474
             D+    +ILD     HV  +S G+ H+  +T  G L+ +G N   Q+G  T +    PT
Sbjct: 1017 EDRYKPTKILD-----HVIAVSLGVGHSGAITQDGSLYMWGWNSDGQIGDGTTKARYTPT 1071

Query: 475  EIFI 478
            +I I
Sbjct: 1072 QITI 1075



 Score = 95.5 bits (236), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 79/296 (26%), Positives = 138/296 (46%), Gaps = 26/296 (8%)

Query: 114  MQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
            + ++ G Y++  I+ + S++  GS++ G +G G  T      T+I      HV+ VS   
Sbjct: 790  VSVSLGDYYSGAITQDGSLYMWGSNVYGQIGDG-TTEDRYKPTKI----LDHVIAVSLGY 844

Query: 173  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
             H+  + Q G ++  G N S   G   T       ++++ +  V     + G++ +G +T
Sbjct: 845  CHSGAITQDGSLYMWGSNDSGQIGDGTTEDRYKPTKILDHVIAV-----SLGVSHSGAIT 899

Query: 233  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
              G ++  GSN+ G +G G T  R  P  I     +  V+ ++       A+T +G +Y 
Sbjct: 900  QDGSLYMWGSNSRGGIGDGTTEVRYKPTKI-----LDHVIAVSLQTGNSGAITQDGSLYM 954

Query: 293  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 352
            +GS     +G G + D  +P  I        HV+ VS GD+H  A+   G +Y WG+ Y 
Sbjct: 955  WGSNVYGEIGDGTEEDRYKPTKILD------HVIAVSLGDDHSGAITQDGSLYMWGRNYY 1008

Query: 353  GALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLG 408
            G +G G E D+  P   + +  H+ + V      +  +   GS+Y +GW   G +G
Sbjct: 1009 GEIGDGTEEDRYKP---TKILDHV-IAVSLGVGHSGAITQDGSLYMWGWNSDGQIG 1060



 Score = 68.2 bits (165), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 58/218 (26%), Positives = 93/218 (42%), Gaps = 18/218 (8%)

Query: 261 SIAPLEEVGSVVQIAAGPSYMLAVTG-NGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFR 319
           +I P   + S  Q+ +   Y   V   +G +Y +G      +G G   +  +P  I    
Sbjct: 730 TIRPDVGINSYSQVLSLGDYHSGVIAQDGSLYMWGVNDFGQIGDGTTKNRYKPTKILD-- 787

Query: 320 RKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQ 379
               HVV VS GD +  A+   G +Y WG    G +G G   D+  P  +      +++ 
Sbjct: 788 ----HVVSVSLGDYYSGAITQDGSLYMWGSNVYGQIGDGTTEDRYKPTKILDHVIAVSLG 843

Query: 380 VCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGL 439
            C     +  +   GS+Y +G    G +G  D    D+    +ILD     HV  +S G+
Sbjct: 844 YC----HSGAITQDGSLYMWGSNDSGQIG--DGTTEDRYKPTKILD-----HVIAVSLGV 892

Query: 440 YHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF 477
            H+  +T  G L+ +G N R  +G  T     +PT+I 
Sbjct: 893 SHSGAITQDGSLYMWGSNSRGGIGDGTTEVRYKPTKIL 930


>gi|282163157|ref|YP_003355542.1| hypothetical protein MCP_0487 [Methanocella paludicola SANAE]
 gi|282155471|dbj|BAI60559.1| conserved hypothetical protein [Methanocella paludicola SANAE]
          Length = 444

 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 92/328 (28%), Positives = 146/328 (44%), Gaps = 28/328 (8%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V +++A   H   +   G V+  G N     G    N     P  V  L GV  K + AG
Sbjct: 73  VRKIAAGYGHVLALKGDGTVWAWGSNKYGQLGDGTYNDSA-GPVQVAGLTGV--KAIAAG 129

Query: 225 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 284
            + +  L   G V   GSN++GQ+G G    + T   I  ++ + ++  I+AG S+ LA 
Sbjct: 130 KDISLALKGDGTVWAWGSNSYGQVGEGSLNYKGTAVPIQ-VKGLNNIQAISAGGSHCLAS 188

Query: 285 TGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
            G+G V+++G   +  LG G       P      R K  +V+ + AGD H +A+   G V
Sbjct: 189 QGDGAVWAWGDNRHGVLGDGTNESRFTP-----VRSKIYNVMGLDAGDAHALAVMVDGNV 243

Query: 345 YTWGKGYCGALGHGD-------------EIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 391
           ++WG  Y G LG G              E D   P+ +  L    +V V A    +  L 
Sbjct: 244 WSWGYNYNGQLGMGGTSLNDLGRLSFGPEADSFNPDIVRGLSGVKSVAVGA--SHSVALA 301

Query: 392 DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRL 451
           D G+V+ +G    G LG    G SD  +  R+      + ++ +  GLYHT+ + D G +
Sbjct: 302 DNGTVWTWGSNSDGQLGVGKTGGSDMTVPVRVSG---INGITAVDAGLYHTLALKDDGSV 358

Query: 452 FGFGDNERAQLGHDTLRGCLEPTEIFIQ 479
           + +G N   Q+G+ +      P  + +Q
Sbjct: 359 WAWGSNAEGQVGNRSASAG-SPALVLMQ 385



 Score = 58.9 bits (141), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 55/212 (25%), Positives = 93/212 (43%), Gaps = 14/212 (6%)

Query: 252 DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQ 311
           D ++  TP+ +    E+  V +IAAG  ++LA+ G+G V+++GS     LG G  +D   
Sbjct: 58  DGVEYATPQKV----EISVVRKIAAGYGHVLALKGDGTVWAWGSNKYGQLGDGTYNDSAG 113

Query: 312 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSS 371
           P  +Q     G+    ++AG +  +AL   G V+ WG    G +G G    K    P+  
Sbjct: 114 P--VQVAGLTGVKA--IAAGKDISLALKGDGTVWAWGSNSYGQVGEGSLNYKGTAVPIQV 169

Query: 372 LKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHH 431
              +    + A           G+V+ +G    G LG    G ++    P      + ++
Sbjct: 170 KGLNNIQAISAGGSHCLASQGDGAVWAWGDNRHGVLG---DGTNESRFTPV---RSKIYN 223

Query: 432 VSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 463
           V  +  G  H + V   G ++ +G N   QLG
Sbjct: 224 VMGLDAGDAHALAVMVDGNVWSWGYNYNGQLG 255


>gi|395503881|ref|XP_003756290.1| PREDICTED: serine/threonine-protein kinase Nek9 [Sarcophilus
           harrisii]
          Length = 941

 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 81/275 (29%), Positives = 126/275 (45%), Gaps = 21/275 (7%)

Query: 207 PRLVEALK-GVPCKQVTAGLNFTGFLTIRGHVHTC-----GSNTHGQLGHGDTLDRPTPK 260
           P+ ++ +K G   +QV AG      +T+   ++T      G+  HGQLGHGD      PK
Sbjct: 324 PQKLDVIKSGCSARQVCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDKASYRQPK 383

Query: 261 SIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH--DELQPRAIQTF 318
            +  L+   ++ Q++ G  + + VT  G +Y+FGS    C+G  +    + L+P  +  F
Sbjct: 384 HVEKLQG-KAIHQVSCGDDFTVCVTDEGQLYAFGSDYYGCMGVDKVAGPEVLEPMQVDFF 442

Query: 319 RRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAV 378
               +   +VS GD HV  L  +  VY+WG G  G LG   E D  +P+ +   K+ + V
Sbjct: 443 LNNPVE--QVSCGDNHVAVLTRNKEVYSWGCGEYGRLGLDSEEDYYIPQKVDVPKALIIV 500

Query: 379 QVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD--RGVSDK--------VLRPRILDSLR 428
            V      TF+L  +G V   G   F  LG      G+ +              +   L 
Sbjct: 501 SVQCSCDGTFLLTQSGKVLACGLNEFNKLGLNQCMSGIINHDAYHEVPYTTSFTLAKQLS 560

Query: 429 AHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 463
            + +  I+ G  HT  + +RGRL  FG N+  QLG
Sbjct: 561 FYKIRTIAPGKTHTAAIDERGRLLTFGCNKCGQLG 595



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 80/375 (21%), Positives = 147/375 (39%), Gaps = 28/375 (7%)

Query: 98  QSVEHSSDIVETSAGNMQITTGRYHTLLIS-NSSVFSC-----GSSLCGVLGHGPETTQC 151
           +S     D++++     Q+  G  H  +++    +++      G+ L G LGHG + +  
Sbjct: 321 KSTPQKLDVIKSGCSARQVCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDKASY- 379

Query: 152 VSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRP-IFRPRLV 210
                +       + QVS  ++    V   GQ++  G +   C G      P +  P  V
Sbjct: 380 RQPKHVEKLQGKAIHQVSCGDDFTVCVTDEGQLYAFGSDYYGCMGVDKVAGPEVLEPMQV 439

Query: 211 EALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSI-APLEEVG 269
           +     P +QV+ G N    LT    V++ G   +G+LG     D   P+ +  P   + 
Sbjct: 440 DFFLNNPVEQVSCGDNHVAVLTRNKEVYSWGCGEYGRLGLDSEEDYYIPQKVDVPKALII 499

Query: 270 SVVQIAAGPSYMLAVTGNGVVYSFGS----GSNFCL----GHGEQHDELQPRAIQTFRRK 321
             VQ +   +++L  +G  +          G N C+     H   H+     +    ++ 
Sbjct: 500 VSVQCSCDGTFLLTQSGKVLACGLNEFNKLGLNQCMSGIINHDAYHEVPYTTSFTLAKQL 559

Query: 322 GIHVVR-VSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLS-SLKSHLAVQ 379
             + +R ++ G  H  A+D  G + T+G   CG LG G+   +     L   L     ++
Sbjct: 560 SFYKIRTIAPGKTHTAAIDERGRLLTFGCNKCGQLGVGNYKKRLGINLLGGPLGGKQVIR 619

Query: 380 VCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD------RGVSDKVLRPRILDSLRAHHVS 433
           V      T    D   ++ +G  G G L            +     RP I  SL  HH+ 
Sbjct: 620 VSCGDEFTIAATDDNHIFAWGNGGNGRLAMTPTERPHGSDICTSWPRP-IFGSL--HHIP 676

Query: 434 QISTGLYHTVVVTDR 448
            +S   +HT+++ ++
Sbjct: 677 DLSCRGWHTILIVEK 691



 Score = 66.2 bits (160), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 45/164 (27%), Positives = 72/164 (43%), Gaps = 6/164 (3%)

Query: 320 RKGIHVVRVSAGDEHVVALDSSGYVYTW-----GKGYCGALGHGDEIDKTLPEPLSSLKS 374
           + G    +V AG+ H   +     +YTW     G    G LGHGD+     P+ +  L+ 
Sbjct: 331 KSGCSARQVCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDKASYRQPKHVEKLQG 390

Query: 375 HLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQ 434
               QV      T  + D G +Y FG   +G +G  D+    +VL P  +D    + V Q
Sbjct: 391 KAIHQVSCGDDFTVCVTDEGQLYAFGSDYYGCMGV-DKVAGPEVLEPMQVDFFLNNPVEQ 449

Query: 435 ISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFI 478
           +S G  H  V+T    ++ +G  E  +LG D+      P ++ +
Sbjct: 450 VSCGDNHVAVLTRNKEVYSWGCGEYGRLGLDSEEDYYIPQKVDV 493



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 93/371 (25%), Positives = 148/371 (39%), Gaps = 47/371 (12%)

Query: 130 SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTC-- 187
           +V +  +S   V G G  T Q +   +    S     QV A   H A V    +++T   
Sbjct: 305 AVVTSRTSEVYVWGGGKSTPQKLDVIK----SGCSARQVCAGNTHFAVVTVEKELYTWVN 360

Query: 188 ---GDNSSFCCGHRDTNRPIFR-PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 243
              G       GH D  +  +R P+ VE L+G    QV+ G +FT  +T  G ++  GS+
Sbjct: 361 MQGGTKLHGQLGHGD--KASYRQPKHVEKLQGKAIHQVSCGDDFTVCVTDEGQLYAFGSD 418

Query: 244 THGQLGHGDTLDRPT-PKSIAPLEE----VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
            +G +G    +D+   P+ + P++        V Q++ G +++  +T N  VYS+G G  
Sbjct: 419 YYGCMG----VDKVAGPEVLEPMQVDFFLNNPVEQVSCGDNHVAVLTRNKEVYSWGCGEY 474

Query: 299 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 358
             LG   + D   P+ +     K + +V V    +    L  SG V   G      LG  
Sbjct: 475 GRLGLDSEEDYYIPQKVDV--PKALIIVSVQCSCDGTFLLTQSGKVLACGLNEFNKLGLN 532

Query: 359 D------------EIDKTLPEPLSSLKSHLAVQVCAR-KRKTFVLVDTGSVYGFGWMGFG 405
                        E+  T    L+   S   ++  A  K  T  + + G +  FG    G
Sbjct: 533 QCMSGIINHDAYHEVPYTTSFTLAKQLSFYKIRTIAPGKTHTAAIDERGRLLTFGCNKCG 592

Query: 406 SLGFPDRGVSDKVLRPRIL-DSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 464
            LG    G   K L   +L   L    V ++S G   T+  TD   +F +G+    +L  
Sbjct: 593 QLGV---GNYKKRLGINLLGGPLGGKQVIRVSCGDEFTIAATDDNHIFAWGNGGNGRLA- 648

Query: 465 DTLRGCLEPTE 475
                 + PTE
Sbjct: 649 ------MTPTE 653



 Score = 50.1 bits (118), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 47/157 (29%), Positives = 72/157 (45%), Gaps = 19/157 (12%)

Query: 327 RVSAGDEHVVALDSS--GYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHL-AVQVCAR 383
           R S  +E  +A+ +S    VY WG G            K+ P+ L  +KS   A QVCA 
Sbjct: 295 RSSTVNETPIAVVTSRTSEVYVWGGG------------KSTPQKLDVIKSGCSARQVCAG 342

Query: 384 KRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKV--LRPRILDSLRAHHVSQISTGLYH 441
                V+     +Y +  M  G+      G  DK    +P+ ++ L+   + Q+S G   
Sbjct: 343 NTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDKASYRQPKHVEKLQGKAIHQVSCGDDF 402

Query: 442 TVVVTDRGRLFGFGDNERAQLGHDTLRG--CLEPTEI 476
           TV VTD G+L+ FG +    +G D + G   LEP ++
Sbjct: 403 TVCVTDEGQLYAFGSDYYGCMGVDKVAGPEVLEPMQV 439


>gi|444916088|ref|ZP_21236212.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
 gi|444712767|gb|ELW53682.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
          Length = 823

 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 105/357 (29%), Positives = 161/357 (45%), Gaps = 15/357 (4%)

Query: 119 GRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAF 177
           G  +TL+   + SV++ G++  G LG G    +  S   ++F +   V +V+A  +HA  
Sbjct: 45  GEAYTLIQRDDGSVWTWGANSGGQLGDGTTAYRLAS-APVDFSNGMVVKRVAAGGSHALA 103

Query: 178 VLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHV 237
           VL    ++  G N     G   T    F P  V    GV    + A    +  +   G V
Sbjct: 104 VLSDKTLWAWGRNGDGQLGVGSTTSS-FSPVKVPGRTGVEVVAMAASTFNSAAVLSDGKV 162

Query: 238 HTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 297
            T G N +GQLG+G T D+ +P  ++ L ++  V   + G  +MLA+   G V+++G   
Sbjct: 163 LTWGYNAYGQLGNGSTTDQSSPVEVSALSDIKGV---SVGKYHMLALRSGGTVWAWGFNG 219

Query: 298 NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 357
           +  LG G   +       Q    KG  V  VSAGD H +AL   G V+ WG+   G LG 
Sbjct: 220 SGQLGLGSGSNTQYNTPQQAAVLKG--VASVSAGDSHSLALRWDGTVWAWGQNNQGQLGI 277

Query: 358 GDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDK 417
           G   D+  P P+   +    V+V A +     L   G+V+ +G+ G G LG    G +  
Sbjct: 278 GSFTDR--PSPVQVPRLTGVVEVAAGQFHALALRLDGTVWAWGFNGSGQLG---DGTTLS 332

Query: 418 VLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPT 474
              P  +  L    V  ++ G  H+V V   GR++ +G N   QLG  +      PT
Sbjct: 333 RSSPVQVPGLTG--VVSVAAGDGHSVAVLSDGRVYTWGRNSAGQLGDGSQDALPHPT 387



 Score = 95.9 bits (237), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 100/359 (27%), Positives = 158/359 (44%), Gaps = 20/359 (5%)

Query: 115 QITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
           ++  G   TL   N   +++ G +  G LG    T   ++   ++  S   V  V+A   
Sbjct: 464 RLVAGAKFTLFQKNDGKLWAWGHNFSGQLGD-DSTVNRLTPVSVSTASLTDVKNVAAGGF 522

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
           H+  +   G++++ G NS    G    +R     R   AL       V      T  L +
Sbjct: 523 HSLALGSDGKLWSWGSNSLSQLG---VSRDTLGSRASPALVSGVSGVVAVAAGETHSLVV 579

Query: 234 --RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG--SVVQIAAGPSYMLAVTGNGV 289
              G V   G N +GQ+G G +   PT    +P E     S++ +AAG ++ LA+  +G 
Sbjct: 580 LSNGKVSAWGYNGYGQIGDGCS-PVPTFYCSSPTEPTNLFSILGVAAGQNHSLALRSDGT 638

Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 349
           V+++G  ++  LG G   D  +P  +    R    VV V AG  H +AL S G V+ WG 
Sbjct: 639 VWAWGRNNSGQLGDGSLVDRTRPVQVARLNR----VVSVVAGLYHSLALRSDGTVWAWGD 694

Query: 350 GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGF 409
              G LG G    + LP  +  L     V V A  R +  L   G+V+ +G+   G +G 
Sbjct: 695 NGSGQLGDGTYFGQMLPVQVPGLSG--VVAVAAGGRHSLALRADGTVWAWGYNSNGQIG- 751

Query: 410 PDRGVSDKVLRPRILDSLRAHH--VSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDT 466
            D   +  + RP  +  L +    V  ++ G  H+V V   GR+  +G N+  QLG+ T
Sbjct: 752 -DGSDASIIYRPSPVKVLFSSQDVVMGVAAGDTHSVAVLSGGRVRTWGQNDSGQLGYAT 809



 Score = 85.9 bits (211), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 91/293 (31%), Positives = 131/293 (44%), Gaps = 33/293 (11%)

Query: 188 GDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQ 247
           GD  SF C        +  PRLV            AG  FT F    G +   G N  GQ
Sbjct: 451 GDGCSFVC-------RLETPRLV------------AGAKFTLFQKNDGKLWAWGHNFSGQ 491

Query: 248 LGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH 307
           LG   T++R TP S++    +  V  +AAG  + LA+  +G ++S+GS S   LG     
Sbjct: 492 LGDDSTVNRLTPVSVS-TASLTDVKNVAAGGFHSLALGSDGKLWSWGSNSLSQLG--VSR 548

Query: 308 DELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTL-- 365
           D L  RA          VV V+AG+ H + + S+G V  WG    G +G G     T   
Sbjct: 549 DTLGSRASPALVSGVSGVVAVAAGETHSLVVLSNGKVSAWGYNGYGQIGDGCSPVPTFYC 608

Query: 366 --PEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRI 423
             P   ++L S L V   A +  +  L   G+V+ +G    G LG  D  + D   R R 
Sbjct: 609 SSPTEPTNLFSILGV--AAGQNHSLALRSDGTVWAWGRNNSGQLG--DGSLVD---RTRP 661

Query: 424 LDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 476
           +   R + V  +  GLYH++ +   G ++ +GDN   QLG  T  G + P ++
Sbjct: 662 VQVARLNRVVSVVAGLYHSLALRSDGTVWAWGDNGSGQLGDGTYFGQMLPVQV 714



 Score = 82.4 bits (202), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 80/255 (31%), Positives = 119/255 (46%), Gaps = 22/255 (8%)

Query: 122 HTLLI-SNSSVFSCGSSLCGVLGHG---PETTQCVSFTR-INFPSAAHVVQVSASENHAA 176
           H+L++ SN  V + G +  G +G G     T  C S T   N  S   ++ V+A +NH+ 
Sbjct: 575 HSLVVLSNGKVSAWGYNGYGQIGDGCSPVPTFYCSSPTEPTNLFS---ILGVAAGQNHSL 631

Query: 177 FVLQSGQVFTCGDNSSFCCGHR---DTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
            +   G V+  G N+S   G     D  RP+   RL   +       V AGL  +  L  
Sbjct: 632 ALRSDGTVWAWGRNNSGQLGDGSLVDRTRPVQVARLNRVVS------VVAGLYHSLALRS 685

Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
            G V   G N  GQLG G    +  P  +  L     VV +AAG  + LA+  +G V+++
Sbjct: 686 DGTVWAWGDNGSGQLGDGTYFGQMLPVQVPGLS---GVVAVAAGGRHSLALRADGTVWAW 742

Query: 294 GSGSNFCLGHGEQHDEL-QPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 352
           G  SN  +G G     + +P  ++        V+ V+AGD H VA+ S G V TWG+   
Sbjct: 743 GYNSNGQIGDGSDASIIYRPSPVKVLFSSQDVVMGVAAGDTHSVAVLSGGRVRTWGQNDS 802

Query: 353 GALGHG-DEIDKTLP 366
           G LG+  +  D++ P
Sbjct: 803 GQLGYATNNTDRSTP 817



 Score = 70.1 bits (170), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 77/306 (25%), Positives = 122/306 (39%), Gaps = 56/306 (18%)

Query: 220 QVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE-EVGSVVQ-IAAG 277
           +  AG  +T      G V T G+N+ GQLG G T  R    + AP++   G VV+ +AAG
Sbjct: 41  RAAAGEAYTLIQRDDGSVWTWGANSGGQLGDGTTAYR---LASAPVDFSNGMVVKRVAAG 97

Query: 278 PSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
            S+ LAV  +  ++++G   +  LG G       P  ++   R G+ VV ++A   +  A
Sbjct: 98  GSHALAVLSDKTLWAWGRNGDGQLGVGSTTSSFSP--VKVPGRTGVEVVAMAASTFNSAA 155

Query: 338 LDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVY 397
           + S G V TWG    G LG+G   D++ P  +S+L     V V   K     L   G+V+
Sbjct: 156 VLSDGKVLTWGYNAYGQLGNGSTTDQSSPVEVSALSDIKGVSV--GKYHMLALRSGGTVW 213

Query: 398 GFG-------------------------------------------WMG----FGSLGFP 410
            +G                                           W G    +G     
Sbjct: 214 AWGFNGSGQLGLGSGSNTQYNTPQQAAVLKGVASVSAGDSHSLALRWDGTVWAWGQNNQG 273

Query: 411 DRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGC 470
             G+     RP  +   R   V +++ G +H + +   G ++ +G N   QLG  T    
Sbjct: 274 QLGIGSFTDRPSPVQVPRLTGVVEVAAGQFHALALRLDGTVWAWGFNGSGQLGDGTTLSR 333

Query: 471 LEPTEI 476
             P ++
Sbjct: 334 SSPVQV 339


>gi|401413264|ref|XP_003886079.1| hypothetical protein NCLIV_064790 [Neospora caninum Liverpool]
 gi|325120499|emb|CBZ56053.1| hypothetical protein NCLIV_064790 [Neospora caninum Liverpool]
          Length = 1765

 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 107/398 (26%), Positives = 168/398 (42%), Gaps = 51/398 (12%)

Query: 115 QITTGRYHTLLI----SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSA 170
           ++  G YHTL++        + + G +   VLG G ET + V    + F S   V +VS 
Sbjct: 50  RVALGLYHTLVVGLKGDQPQLLAWGKNYNNVLGLGVETRERVFPGLVPFFSRHGVFEVSC 109

Query: 171 SENHAAFVLQ-----SGQVFTCGDNSSFCCGH-------------------RDTNRPIFR 206
             N++A +++      G+V+T G  +    G+                   ++     F 
Sbjct: 110 GTNNSAVLVKRAQQSGGKVYTFGLGNRGRLGYPKSKAEGGARQQGDDAGDGQEDGPSWFT 169

Query: 207 PRLVEALKGVPCK--QVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP 264
           P+         CK  +++ G + T  L+  G ++  G  ++G LG GDT D  +P  +  
Sbjct: 170 PKPARVRFRDKCKIARISCGADHTLALSDGGALYAWGVGSYGNLGQGDTSDAYSPVRVLL 229

Query: 265 LEEVGS------------------VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ 306
             E GS                  V   AAG  + +A T +G ++++G G N  LG G  
Sbjct: 230 GSEKGSGKKKENLGIGRRGTDPVVVTCCAAGAKHSMACTSDGTLWTWGHGGNGRLGLGHN 289

Query: 307 HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP 366
              L P  +     +   VV VSAGD H   +D  G +YTWG G  G LGHGD+ +  +P
Sbjct: 290 RGSLSPAVVDYILDR--DVVFVSAGDSHSACIDRQGVLYTWGSGGFGRLGHGDQGEIPVP 347

Query: 367 EPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDS 426
             +        +QV      T  L   G+V+ +G      LG  + G    V  P+ L  
Sbjct: 348 RKVEGFGGVPVLQVACGTFHTLALTHKGTVFAWGAGLALGLGEGEDGGGGMVTVPKHLSD 407

Query: 427 LRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 464
           +    V  ++ G YH+  VT  G L  +G    ++LGH
Sbjct: 408 IEV-AVLNVAAGPYHSAAVTVGGDLLVWGVGGSSRLGH 444



 Score = 95.1 bits (235), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 107/423 (25%), Positives = 176/423 (41%), Gaps = 68/423 (16%)

Query: 115 QITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAH--------- 164
           +I+ G  HTL +S+  ++++ G    G LG G +T+   S  R+   S            
Sbjct: 185 RISCGADHTLALSDGGALYAWGVGSYGNLGQG-DTSDAYSPVRVLLGSEKGSGKKKENLG 243

Query: 165 ----------VVQVSASENHAAFVLQSGQVFTCG--DNSSFCCGHRDTNRPIFRPRLVEA 212
                     V   +A   H+      G ++T G   N     GH   NR    P +V+ 
Sbjct: 244 IGRRGTDPVVVTCCAAGAKHSMACTSDGTLWTWGHGGNGRLGLGH---NRGSLSPAVVDY 300

Query: 213 LKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV 272
           +       V+AG + +  +  +G ++T GS   G+LGHGD  + P P+ +     V  V+
Sbjct: 301 ILDRDVVFVSAGDSHSACIDRQGVLYTWGSGGFGRLGHGDQGEIPVPRKVEGFGGV-PVL 359

Query: 273 QIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGD 332
           Q+A G  + LA+T  G V+++G+G    LG GE          +      + V+ V+AG 
Sbjct: 360 QVACGTFHTLALTHKGTVFAWGAGLALGLGEGEDGGGGMVTVPKHLSDIEVAVLNVAAGP 419

Query: 333 EHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQV------CARKRK 386
            H  A+   G +  WG G    LGHGD+ ++  P+ ++ L++ + V         +R R+
Sbjct: 420 YHSAAVTVGGDLLVWGVGGSSRLGHGDQQNQPFPKYVADLRNRMYVADLQSMLGVSRLRR 479

Query: 387 ---------------------------------TFVLVDTGSVYGFGWMGFGSLGFPDRG 413
                                            T  L  TG+V+ +G    G LG  ++ 
Sbjct: 480 DYSDFDVLGESAGGAGANAAAWTLQSLGCGENHTVALTGTGAVWVWGSNDEGQLGLGEQ- 538

Query: 414 VSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEP 473
           V +    P  LD   +  + +I+ G  H + V   G +F +G N+  QLG   LR   EP
Sbjct: 539 VEEDQYEPVKLDCF-STPIRRIACGSKHCLAVAQYGDVFAWGANDDGQLGLGVLRPSFEP 597

Query: 474 TEI 476
             +
Sbjct: 598 AAV 600



 Score = 71.6 bits (174), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 96/417 (23%), Positives = 159/417 (38%), Gaps = 64/417 (15%)

Query: 116 ITTGRYHTLLISNSSV-FSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           ++ G  H+  I    V ++ GS   G LGHG +    V      F     V+QV+    H
Sbjct: 309 VSAGDSHSACIDRQGVLYTWGSGGFGRLGHGDQGEIPVPRKVEGF-GGVPVLQVACGTFH 367

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTNRP--IFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
              +   G VF  G   +   G  +      +  P+ +  ++ V    V AG   +  +T
Sbjct: 368 TLALTHKGTVFAWGAGLALGLGEGEDGGGGMVTVPKHLSDIE-VAVLNVAAGPYHSAAVT 426

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA---------------- 276
           + G +   G     +LGHGD  ++P PK +A L     V  + +                
Sbjct: 427 VGGDLLVWGVGGSSRLGHGDQQNQPFPKYVADLRNRMYVADLQSMLGVSRLRRDYSDFDV 486

Query: 277 ----------------------GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ--HDELQP 312
                                 G ++ +A+TG G V+ +GS     LG GEQ   D+ +P
Sbjct: 487 LGESAGGAGANAAAWTLQSLGCGENHTVALTGTGAVWVWGSNDEGQLGLGEQVEEDQYEP 546

Query: 313 RAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSL 372
             +  F      + R++ G +H +A+   G V+ WG    G LG G       P  +++L
Sbjct: 547 VKLDCF---STPIRRIACGSKHCLAVAQYGDVFAWGANDDGQLGLGVLRPSFEPAAVTAL 603

Query: 373 KSHLAV------QVCARKR---KTFVLV-----DTGSVYGFGWMGFGSLGFPDRGVSDKV 418
           +  + V        C       +T  L      + G ++ +G    G LG  +   S  +
Sbjct: 604 RQAIDVFCGDDYSACITSNGGAQTVSLALESGTEFGDLWTWGAAESGKLGLGEDVASGSI 663

Query: 419 LRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTE 475
           L P+ +    +  V   S G  H + +T RG  + +G     +LG  T      PT+
Sbjct: 664 LTPQKVPF--SVPVCACSLGTSHALAITARGECYAWGAGYYGRLGIGTTANAYAPTK 718



 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 73/316 (23%), Positives = 117/316 (37%), Gaps = 39/316 (12%)

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCG-HRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
           ENH   +  +G V+  G N     G         + P  ++     P +++  G      
Sbjct: 510 ENHTVALTGTGAVWVWGSNDEGQLGLGEQVEEDQYEPVKLDCFS-TPIRRIACGSKHCLA 568

Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG-- 288
           +   G V   G+N  GQLG G       P ++  L +    + +  G  Y   +T NG  
Sbjct: 569 VAQYGDVFAWGANDDGQLGLGVLRPSFEPAAVTALRQA---IDVFCGDDYSACITSNGGA 625

Query: 289 --------------VVYSFGSGSNFCLGHGEQHDE---LQPRAIQTFRRKGIHVVRVSAG 331
                          ++++G+  +  LG GE       L P+ +       + V   S G
Sbjct: 626 QTVSLALESGTEFGDLWTWGAAESGKLGLGEDVASGSILTPQKVPF----SVPVCACSLG 681

Query: 332 DEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 391
             H +A+ + G  Y WG GY G LG G   +   P      K      V A    +  L 
Sbjct: 682 TSHALAITARGECYAWGAGYYGRLGIGTTANAYAPTKCDFPKGVRIRSVAAGASHSLALS 741

Query: 392 DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRA----HHVSQISTGLYHTVVVTD 447
             G ++ +G          D   +     PRI   L +      V  I+   +H++ VT+
Sbjct: 742 MDGDLWIWG-------KKEDTCSTTNYNSPRIFMQLESPSGVPKVKSIAAAEHHSLAVTE 794

Query: 448 RGRLFGFGDNERAQLG 463
            G +F +GDN+  Q G
Sbjct: 795 TGEVFAWGDNKLYQTG 810



 Score = 52.8 bits (125), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 73/289 (25%), Positives = 112/289 (38%), Gaps = 70/289 (24%)

Query: 219 KQVTAGLNFTGFLTIRG---HVHTCGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQI 274
           K+V  GL  T  + ++G    +   G N +  LG G +T +R  P  + P      V ++
Sbjct: 49  KRVALGLYHTLVVGLKGDQPQLLAWGKNYNNVLGLGVETRERVFP-GLVPFFSRHGVFEV 107

Query: 275 AAGPS-----YMLAVTGNGVVYSFGSGSNFCLGHGEQHDE-------------------- 309
           + G +        A    G VY+FG G+   LG+ +   E                    
Sbjct: 108 SCGTNNSAVLVKRAQQSGGKVYTFGLGNRGRLGYPKSKAEGGARQQGDDAGDGQEDGPSW 167

Query: 310 LQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPL 369
             P+  +   R    + R+S G +H +AL   G +Y WG G  G LG GD  D   P   
Sbjct: 168 FTPKPARVRFRDKCKIARISCGADHTLALSDGGALYAWGVGSYGNLGQGDTSDAYSP--- 224

Query: 370 SSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRA 429
             ++  L  +  + K+K                   +LG   RG +D V+          
Sbjct: 225 --VRVLLGSEKGSGKKKE------------------NLGIGRRG-TDPVV---------- 253

Query: 430 HHVSQISTGLYHTVVVTDRGRL--FGFGDNERAQLGHDTLRGCLEPTEI 476
             V+  + G  H++  T  G L  +G G N R  LGH+  RG L P  +
Sbjct: 254 --VTCCAAGAKHSMACTSDGTLWTWGHGGNGRLGLGHN--RGSLSPAVV 298



 Score = 40.8 bits (94), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 44/183 (24%), Positives = 73/183 (39%), Gaps = 8/183 (4%)

Query: 130 SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGD 189
            +++ G++  G LG G +       T    P +  V   S   +HA  +   G+ +  G 
Sbjct: 640 DLWTWGAAESGKLGLGEDVASGSILTPQKVPFSVPVCACSLGTSHALAITARGECYAWGA 699

Query: 190 NSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLG 249
                 G   T    + P   +  KGV  + V AG + +  L++ G +   G        
Sbjct: 700 GYYGRLGI-GTTANAYAPTKCDFPKGVRIRSVAAGASHSLALSMDGDLWIWGKKED---- 754

Query: 250 HGDTLDRPTPKSIAPLEE---VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ 306
              T +  +P+    LE    V  V  IAA   + LAVT  G V+++G    +  G G++
Sbjct: 755 TCSTTNYNSPRIFMQLESPSGVPKVKSIAAAEHHSLAVTETGEVFAWGDNKLYQTGCGKR 814

Query: 307 HDE 309
             E
Sbjct: 815 QAE 817


>gi|380792513|gb|AFE68132.1| RCC1 and BTB domain-containing protein 2, partial [Macaca mulatta]
          Length = 369

 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 80/275 (29%), Positives = 122/275 (44%), Gaps = 5/275 (1%)

Query: 128 NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS-ASENHAAFVLQSGQVFT 186
           N  +F  G++ CG LG G +    +   R++  S   +  +S  S  H       G+VFT
Sbjct: 64  NDEIFVLGTNCCGCLGLG-DVQSTIEPRRLDSLSGKKIASLSYGSGPHIVLATTEGEVFT 122

Query: 187 CGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHG 246
            G N+    G+  TN  +   ++   L      +V  G   +  LT  G V   G N  G
Sbjct: 123 WGHNAYSQLGNGTTNHGLVPCQISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSG 182

Query: 247 QLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ 306
           Q+G G T+++P P+ +    +   VV IA G    +AV   G VY +G   N  LG G  
Sbjct: 183 QVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGSS 242

Query: 307 HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP 366
            +  QP   +    +GI V RV+ G  H + L   G VY WG    G LG G++ +++ P
Sbjct: 243 GN--QPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYP 300

Query: 367 EPLSSLKSH-LAVQVCARKRKTFVLVDTGSVYGFG 400
            P++  K   + +  C     +      G VY +G
Sbjct: 301 TPVTMEKDRIIEIAACHSTHTSAAKTQGGHVYMWG 335



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 75/258 (29%), Positives = 124/258 (48%), Gaps = 12/258 (4%)

Query: 230 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGSVVQIAAGPSYMLAVTGN 287
           + T+   +   G+N  G LG GD      P+ +  L  +++ S+    +GP  +LA T  
Sbjct: 60  YTTVNDEIFVLGTNCCGCLGLGDVQSTIEPRRLDSLSGKKIASL-SYGSGPHIVLATT-E 117

Query: 288 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 347
           G V+++G  +   LG+G  +  L P  I T       V+ V+ G  H + L S G V+ W
Sbjct: 118 GEVFTWGHNAYSQLGNGTTNHGLVPCQIST-NLSNKQVIEVACGSYHSLVLTSDGEVFAW 176

Query: 348 GKGYCGALGHGDEIDKTLPEPLSS-LKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGS 406
           G    G +G G  +++ +P  ++  L++ + V +   +     +VDTG VY +G+ G G 
Sbjct: 177 GYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQ 236

Query: 407 LGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDT 466
           LG    G      R   L  +R   V +++ G  HT+V+TD G+++ +G N   QLG   
Sbjct: 237 LGLGSSGNQPTPCRVAALQGIR---VQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGN 293

Query: 467 LRGCLEPTEIFIQEMEED 484
                 PT +    ME+D
Sbjct: 294 KSNQSYPTPV---TMEKD 308



 Score = 85.5 bits (210), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 66/241 (27%), Positives = 111/241 (46%), Gaps = 3/241 (1%)

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL- 231
           N   +   + ++F  G N   C G  D    I  PR +++L G     ++ G      L 
Sbjct: 56  NEVLYTTVNDEIFVLGTNCCGCLGLGDVQSTI-EPRRLDSLSGKKIASLSYGSGPHIVLA 114

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
           T  G V T G N + QLG+G T     P  I+       V+++A G  + L +T +G V+
Sbjct: 115 TTEGEVFTWGHNAYSQLGNGTTNHGLVPCQISTNLSNKQVIEVACGSYHSLVLTSDGEVF 174

Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 351
           ++G  ++  +G G   ++  PR +    +  + VV ++ G    +A+  +G VY WG   
Sbjct: 175 AWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKV-VVTIACGQMCCMAVVDTGEVYVWGYNG 233

Query: 352 CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 411
            G LG G   ++  P  +++L+     +V      T VL D G VY +G   +G LG  +
Sbjct: 234 NGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGN 293

Query: 412 R 412
           +
Sbjct: 294 K 294


>gi|426236339|ref|XP_004012127.1| PREDICTED: RCC1 and BTB domain-containing protein 1 [Ovis aries]
          Length = 531

 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 79/255 (30%), Positives = 123/255 (48%), Gaps = 11/255 (4%)

Query: 230 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGSVVQIAAGPSYMLAVTGN 287
           ++T    V   G N    LG GD      PK +  L  +++ S+    +GP  +L+ T +
Sbjct: 36  YVTDSDEVFVFGLNYSNCLGTGDNQSTLVPKKLDALCGKKIKSL-SYGSGPHVLLS-TED 93

Query: 288 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGI-HVVRVSAGDEHVVALDSSGYVYT 346
           GVVY++G      LG+G  +  L P  IQ      I  VV V+ G  H +AL + G V+ 
Sbjct: 94  GVVYAWGHNGYSQLGNGTTNQGLAP--IQVCTNLLIKQVVEVACGSHHSMALAADGEVFA 151

Query: 347 WGKGYCGALGHGDEIDKTLPEPLSS-LKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFG 405
           WG   CG +G G   ++  P  +++ L     V +   +  +  ++D G VYG+G+ G G
Sbjct: 152 WGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNG 211

Query: 406 SLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHD 465
            LG  + G     L P  + +L +  V+QI  G  HT+ +TD G L+ +G N   QLG  
Sbjct: 212 QLGLGNNG---NQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTG 268

Query: 466 TLRGCLEPTEIFIQE 480
                L P  I +++
Sbjct: 269 NKNNLLSPAHIMVEK 283



 Score = 82.0 bits (201), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 62/228 (27%), Positives = 97/228 (42%), Gaps = 3/228 (1%)

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
           H     + G V+  G N     G+  TN+ +   ++   L      +V  G + +  L  
Sbjct: 86  HVLLSTEDGVVYAWGHNGYSQLGNGTTNQGLAPIQVCTNLLIKQVVEVACGSHHSMALAA 145

Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
            G V   G N  GQ+G G T ++PTP+ +     +  VV IA G +  +AV  NG VY +
Sbjct: 146 DGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGW 205

Query: 294 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 353
           G   N  LG G   ++L P  +       + V ++  G  H +AL   G +Y WG    G
Sbjct: 206 GYNGNGQLGLGNNGNQLTPVRVAALH--SVCVNQIVCGYAHTLALTDEGLLYAWGANTYG 263

Query: 354 ALGHGDEIDKTLPEPLSSLKSH-LAVQVCARKRKTFVLVDTGSVYGFG 400
            LG G++ +   P  +   K   + +  C     +      G VY +G
Sbjct: 264 QLGTGNKNNLLSPAHIMVEKERVIEIAACHSAHTSAAKTQGGHVYMWG 311


>gi|345803705|ref|XP_547912.3| PREDICTED: serine/threonine-protein kinase Nek9 isoform 2 [Canis
           lupus familiaris]
          Length = 976

 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 83/275 (30%), Positives = 126/275 (45%), Gaps = 21/275 (7%)

Query: 207 PRLVEALK-GVPCKQVTAGLNFTGFLTIRGHVHTC-----GSNTHGQLGHGDTLDRPTPK 260
           P+ ++ +K G   +QV AG      +T+   ++T      G+  HGQLGHGD      PK
Sbjct: 359 PQKLDVIKSGCSARQVCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDKASYRQPK 418

Query: 261 SIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH--DELQPRAIQTF 318
            +  L+   ++ Q++ G  + + VT  G +Y+FGS    C+G  +    + L+P  +  F
Sbjct: 419 HVEKLQG-KAIRQVSCGDDFTVCVTDEGQLYAFGSDYYGCMGVDKVAGPEVLEPMQLNFF 477

Query: 319 RRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAV 378
               +   +VS GD HVV L  +  VY+WG G  G LG   E D   P+ +   K+ + V
Sbjct: 478 LNNPVE--QVSCGDNHVVVLTRNKEVYSWGCGEYGRLGLDSEEDYYTPQKVDVPKALIIV 535

Query: 379 QVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD--RGVSDKVLRPRI--------LDSLR 428
            V      TF+L  +G V   G   F  LG      G+ +      I           L 
Sbjct: 536 AVQCGCDGTFLLTQSGKVLACGLNEFNKLGLNQCMSGIINHEAYHEIPYTTSFTLAKQLS 595

Query: 429 AHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 463
            + +  I+ G  HT  + +RGRL  FG N+  QLG
Sbjct: 596 FYKIRTIAPGKTHTAAIDERGRLLTFGCNKCGQLG 630



 Score = 69.7 bits (169), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 76/307 (24%), Positives = 127/307 (41%), Gaps = 40/307 (13%)

Query: 115 QITTGRYHTLLISNS-SVFSCGSSLCGVLG----HGPETTQCVSFTRINFPSAAHVVQVS 169
           Q++ G   T+ +++   +++ GS   G +G     GPE  + +   ++NF     V QVS
Sbjct: 430 QVSCGDDFTVCVTDEGQLYAFGSDYYGCMGVDKVAGPEVLEPM---QLNFFLNNPVEQVS 486

Query: 170 ASENHAAFVLQSGQVFTCGDNSSFCCGHR-----DTNRPIFRPRLVEALKGVPCKQVTAG 224
             +NH   + ++ +V++ G      CG       D+    + P+ V+  K +    V  G
Sbjct: 487 CGDNHVVVLTRNKEVYSWG------CGEYGRLGLDSEEDYYTPQKVDVPKALIIVAVQCG 540

Query: 225 LNFTGFLTIRGHVHTCGSNTHGQLG----------HGDTLDRPTPKSIAPLEEVG--SVV 272
            + T  LT  G V  CG N   +LG          H    + P   S    +++    + 
Sbjct: 541 CDGTFLLTQSGKVLACGLNEFNKLGLNQCMSGIINHEAYHEIPYTTSFTLAKQLSFYKIR 600

Query: 273 QIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGD 332
            IA G ++  A+   G + +FG      LG G     L    +      G  V+RVS GD
Sbjct: 601 TIAPGKTHTAAIDERGRLLTFGCNKCGQLGVGNYKKRLGINLLGG-PLGGKQVIRVSCGD 659

Query: 333 EHVVALDSSGYVYTWGKGYCGALG-------HGDEIDKTLPEPLSSLKSHLAVQVCARKR 385
           E  +A     +++ WG G  G L        HG +I  + P P+     H+    C R  
Sbjct: 660 EFTIAATDDNHIFAWGNGGNGRLAMTPTERPHGSDICTSWPRPIFGSLHHVPDLSC-RGW 718

Query: 386 KTFVLVD 392
            T ++V+
Sbjct: 719 HTILIVE 725



 Score = 68.9 bits (167), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 81/375 (21%), Positives = 146/375 (38%), Gaps = 28/375 (7%)

Query: 98  QSVEHSSDIVETSAGNMQITTGRYHTLLIS-NSSVFSC-----GSSLCGVLGHGPETTQC 151
           +S     D++++     Q+  G  H  +++    +++      G+ L G LGHG + +  
Sbjct: 356 KSTPQKLDVIKSGCSARQVCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDKASY- 414

Query: 152 VSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRP-IFRPRLV 210
                +       + QVS  ++    V   GQ++  G +   C G      P +  P  +
Sbjct: 415 RQPKHVEKLQGKAIRQVSCGDDFTVCVTDEGQLYAFGSDYYGCMGVDKVAGPEVLEPMQL 474

Query: 211 EALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSI-APLEEVG 269
                 P +QV+ G N    LT    V++ G   +G+LG     D  TP+ +  P   + 
Sbjct: 475 NFFLNNPVEQVSCGDNHVVVLTRNKEVYSWGCGEYGRLGLDSEEDYYTPQKVDVPKALII 534

Query: 270 SVVQIAAGPSYMLAVTGNGVVYSFGS----GSNFCL----GHGEQHDELQPRAIQTFRRK 321
             VQ     +++L  +G  +          G N C+     H   H+     +    ++ 
Sbjct: 535 VAVQCGCDGTFLLTQSGKVLACGLNEFNKLGLNQCMSGIINHEAYHEIPYTTSFTLAKQL 594

Query: 322 GIHVVR-VSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLS-SLKSHLAVQ 379
             + +R ++ G  H  A+D  G + T+G   CG LG G+   +     L   L     ++
Sbjct: 595 SFYKIRTIAPGKTHTAAIDERGRLLTFGCNKCGQLGVGNYKKRLGINLLGGPLGGKQVIR 654

Query: 380 VCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD------RGVSDKVLRPRILDSLRAHHVS 433
           V      T    D   ++ +G  G G L            +     RP I  SL  HHV 
Sbjct: 655 VSCGDEFTIAATDDNHIFAWGNGGNGRLAMTPTERPHGSDICTSWPRP-IFGSL--HHVP 711

Query: 434 QISTGLYHTVVVTDR 448
            +S   +HT+++ ++
Sbjct: 712 DLSCRGWHTILIVEK 726



 Score = 68.6 bits (166), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 46/164 (28%), Positives = 73/164 (44%), Gaps = 6/164 (3%)

Query: 320 RKGIHVVRVSAGDEHVVALDSSGYVYTW-----GKGYCGALGHGDEIDKTLPEPLSSLKS 374
           + G    +V AG+ H   +     +YTW     G    G LGHGD+     P+ +  L+ 
Sbjct: 366 KSGCSARQVCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDKASYRQPKHVEKLQG 425

Query: 375 HLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQ 434
               QV      T  + D G +Y FG   +G +G  D+    +VL P  L+    + V Q
Sbjct: 426 KAIRQVSCGDDFTVCVTDEGQLYAFGSDYYGCMGV-DKVAGPEVLEPMQLNFFLNNPVEQ 484

Query: 435 ISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFI 478
           +S G  H VV+T    ++ +G  E  +LG D+      P ++ +
Sbjct: 485 VSCGDNHVVVLTRNKEVYSWGCGEYGRLGLDSEEDYYTPQKVDV 528



 Score = 66.6 bits (161), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 98/388 (25%), Positives = 156/388 (40%), Gaps = 47/388 (12%)

Query: 113 NMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           N      R  T+  +  +V +  +S   V G G  T Q +   +    S     QV A  
Sbjct: 323 NAPTKRPRSSTVTEAPIAVVTSRTSEVYVWGGGKSTPQKLDVIK----SGCSARQVCAGN 378

Query: 173 NHAAFVLQSGQVFTC-----GDNSSFCCGHRDTNRPIFR-PRLVEALKGVPCKQVTAGLN 226
            H A V    +++T      G       GH D  +  +R P+ VE L+G   +QV+ G +
Sbjct: 379 THFAVVTVEKELYTWVNMQGGTKLHGQLGHGD--KASYRQPKHVEKLQGKAIRQVSCGDD 436

Query: 227 FTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPT-PKSIAPLE----EVGSVVQIAAGPSYM 281
           FT  +T  G ++  GS+ +G +G    +D+   P+ + P++        V Q++ G +++
Sbjct: 437 FTVCVTDEGQLYAFGSDYYGCMG----VDKVAGPEVLEPMQLNFFLNNPVEQVSCGDNHV 492

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 341
           + +T N  VYS+G G    LG   + D   P+ +     K + +V V  G +    L  S
Sbjct: 493 VVLTRNKEVYSWGCGEYGRLGLDSEEDYYTPQKVDV--PKALIIVAVQCGCDGTFLLTQS 550

Query: 342 GYVYTWGKGYCGALGHGD------------EIDKTLPEPLSSLKSHLAVQVCAR-KRKTF 388
           G V   G      LG               EI  T    L+   S   ++  A  K  T 
Sbjct: 551 GKVLACGLNEFNKLGLNQCMSGIINHEAYHEIPYTTSFTLAKQLSFYKIRTIAPGKTHTA 610

Query: 389 VLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRIL-DSLRAHHVSQISTGLYHTVVVTD 447
            + + G +  FG    G LG    G   K L   +L   L    V ++S G   T+  TD
Sbjct: 611 AIDERGRLLTFGCNKCGQLGV---GNYKKRLGINLLGGPLGGKQVIRVSCGDEFTIAATD 667

Query: 448 RGRLFGFGDNERAQLGHDTLRGCLEPTE 475
              +F +G+    +L        + PTE
Sbjct: 668 DNHIFAWGNGGNGRLA-------MTPTE 688



 Score = 49.3 bits (116), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 43/146 (29%), Positives = 65/146 (44%), Gaps = 17/146 (11%)

Query: 336 VALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHL-AVQVCARKRKTFVLVDTG 394
           V    +  VY WG G            K+ P+ L  +KS   A QVCA      V+    
Sbjct: 341 VVTSRTSEVYVWGGG------------KSTPQKLDVIKSGCSARQVCAGNTHFAVVTVEK 388

Query: 395 SVYGFGWMGFGSLGFPDRGVSDKV--LRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLF 452
            +Y +  M  G+      G  DK    +P+ ++ L+   + Q+S G   TV VTD G+L+
Sbjct: 389 ELYTWVNMQGGTKLHGQLGHGDKASYRQPKHVEKLQGKAIRQVSCGDDFTVCVTDEGQLY 448

Query: 453 GFGDNERAQLGHDTLRG--CLEPTEI 476
            FG +    +G D + G   LEP ++
Sbjct: 449 AFGSDYYGCMGVDKVAGPEVLEPMQL 474


>gi|47214261|emb|CAG01938.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 1055

 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 96/350 (27%), Positives = 153/350 (43%), Gaps = 56/350 (16%)

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
           H+ F+L  G V+TCG N    CG    N+P   P LV AL       V+ G   +  +  
Sbjct: 44  HSVFLLHDGSVYTCGSNG---CGQLGHNKPGTSPELVGALDTQRITLVSCGQAHSMAVNE 100

Query: 234 RGHVHTCGSNTHGQLGHGDT-LDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
           +G V   G+   GQLG G T      P+ I  L +   + Q+  G  + +A++ +G +++
Sbjct: 101 QGQVFAWGAGDGGQLGLGTTEAAVRIPRLIKRLCD-HRIAQVMCGNQHCIALSKDGQLFT 159

Query: 293 FGSGSNFCLGHGE-QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 351
           +G  ++  LG G+ +  +L P+ +++    GI + +++AG +H  AL  SG V+ WGK  
Sbjct: 160 WGQNTSGQLGLGKGEPSKLFPQPLKSL--AGIPLAKITAGGDHSFALSLSGAVFGWGKNK 217

Query: 352 CGALGHGDEIDKTLPEPLSSLKSHLAVQV------------------------------- 380
            G LG  D  D+ +P  +  L+S   V +                               
Sbjct: 218 AGQLGLNDIQDRAVPCHIKFLRSQKVVHISCGDEHTAALTKVRIRSASQCFRTSGGRCSN 277

Query: 381 --------CARKRKTFVLV---DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRA 429
                   C+   +  +L+     G ++ FG   +G LG    G +   L PR +  L  
Sbjct: 278 PFFCQRIGCSHSTRVTILLWLFQDGGLFTFGDGSWGQLG---HGSTSNELLPRRVLELMG 334

Query: 430 HHVSQISTGLYHTVVVT-DRGRLFGFGDNERAQLGHDTLRG--CLEPTEI 476
             VSQI+ G +HT+      G ++ FG N   QLG   L    CL P +I
Sbjct: 335 TEVSQITCGRHHTLAFAPSSGVVYAFGGNSHGQLGTGELSAEKCLYPVKI 384


>gi|329927260|ref|ZP_08281541.1| hypothetical protein HMPREF9412_2305 [Paenibacillus sp. HGF5]
 gi|328938563|gb|EGG34947.1| hypothetical protein HMPREF9412_2305 [Paenibacillus sp. HGF5]
          Length = 1058

 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 108/396 (27%), Positives = 176/396 (44%), Gaps = 28/396 (7%)

Query: 114 MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQ-CVSFTRINFPSA-------AH 164
           + I++  YHTL L+ N +V S GS++ G LG+G +      SF +  + +        A+
Sbjct: 21  VSISSKGYHTLALLDNGTVLSWGSNMVGQLGNGKQGLNFSTSFAQPVYENVNGELKVLAN 80

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           +V V AS+ ++  +   G V+  G N+S   G R      + P  +      P +Q++AG
Sbjct: 81  IVAVEASQQYSLALSADGTVYGWGLNASNELG-RPFEGTYYYPTAISIAGLPPIEQISAG 139

Query: 225 LNFTGFLTIRGHVHTCGSNTHGQLGHG---DTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 281
           +     L   G V   G N  G +G+G   + ++RP        E +  + QI AG  + 
Sbjct: 140 VTHAAALAKDGTVWAWGDNQSGAVGNGRQMEYVERPVQVKKNASEFLTGIKQIHAGNWFT 199

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQP-RAIQTFRRKGIHVVRVSAGDEHVVALDS 340
           +AVT NG +  +G    + LG         P  A+   +     + +VS G+++ +AL  
Sbjct: 200 MAVTENGELLGWGYNGAYQLGDLTLVSHSYPVHALDKNKNPLNGIKKVSTGNDYTLALKE 259

Query: 341 SGYVYTWGKGYCGALGHGDEIDKTL---PEPLSSLKSHLA----VQVCARKRKTFVLVDT 393
            G + +WG    G LG  D +  T    P+P+    S  A    V + A       + + 
Sbjct: 260 DGTLLSWGVNGYGQLGS-DTLQGTYSNYPKPVLDKASGDAFGHVVDISAGIAHVAAIRED 318

Query: 394 GSVYGFG----WMGFGSLGFPDRGVSDKVLRPRILDSLRAH-HVSQISTGLYHTVVVTDR 448
           GSV+ +G    W      G   RG      RP  +  L  +  V Q  TG +HTV++ D 
Sbjct: 319 GSVWTWGGNTIWGSADITGQLGRGDDRLEERPGRVTRLPGNAKVLQAETGGHHTVIMLDN 378

Query: 449 GRLFGFGDNERAQLGHDTLRG-CLEPTEIFIQEMEE 483
           G L+  G N   QLG     G  +EPT++ +   ++
Sbjct: 379 GTLWSMGSNREKQLGGGYKMGSAIEPTQLSLSHYDK 414



 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 81/306 (26%), Positives = 135/306 (44%), Gaps = 55/306 (17%)

Query: 194 CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI----RGHVHTCGSNTHGQLG 249
             GH DT +            G+P +     ++  G+ T+     G V + GSN  GQLG
Sbjct: 3   TTGHADTGK-----------AGLPGETNIVSISSKGYHTLALLDNGTVLSWGSNMVGQLG 51

Query: 250 HGD-------TLDRPTPKSI-APLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCL 301
           +G        +  +P  +++   L+ + ++V + A   Y LA++ +G VY +G  ++  L
Sbjct: 52  NGKQGLNFSTSFAQPVYENVNGELKVLANIVAVEASQQYSLALSADGTVYGWGLNASNEL 111

Query: 302 GHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEI 361
           G   +     P AI       I   ++SAG  H  AL   G V+ WG    GA+G+G ++
Sbjct: 112 GRPFEGTYYYPTAISIAGLPPIE--QISAGVTHAAALAKDGTVWAWGDNQSGAVGNGRQM 169

Query: 362 D---------KTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLG---- 408
           +         K   E L+ +K     Q+ A    T  + + G + G+G+ G   LG    
Sbjct: 170 EYVERPVQVKKNASEFLTGIK-----QIHAGNWFTMAVTENGELLGWGYNGAYQLGDLTL 224

Query: 409 ----FPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 464
               +P   + DK   P        + + ++STG  +T+ + + G L  +G N   QLG 
Sbjct: 225 VSHSYPVHAL-DKNKNP-------LNGIKKVSTGNDYTLALKEDGTLLSWGVNGYGQLGS 276

Query: 465 DTLRGC 470
           DTL+G 
Sbjct: 277 DTLQGT 282


>gi|15223423|ref|NP_174026.1| regulator of chromosome condensation-like protein [Arabidopsis
           thaliana]
 gi|124301018|gb|ABN04761.1| At1g27060 [Arabidopsis thaliana]
 gi|332192654|gb|AEE30775.1| regulator of chromosome condensation-like protein [Arabidopsis
           thaliana]
          Length = 386

 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 90/295 (30%), Positives = 131/295 (44%), Gaps = 20/295 (6%)

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
           H   +   G+VFT G  SS   GH D    I  P+LV         Q  AG + +GF++ 
Sbjct: 59  HVIALTSGGKVFTWGRGSSGQLGHGDILN-ITLPKLVSFFDDSVITQAAAGWSHSGFVSD 117

Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
            G + TCG+ + GQLGHGDTL   TP  ++      SV  +A G  + L +     V  F
Sbjct: 118 SGCIFTCGNGSFGQLGHGDTLSLSTPAKVSHFNN-DSVKMVACGMRHSLVLFAGNQVCGF 176

Query: 294 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 353
           GSG    LG      +           K + VVR+SA  +H  A+ + G  ++WG+G+CG
Sbjct: 177 GSGKRGQLGFSSDRIKSVNLPCVVSGLKDVEVVRISANGDHSAAISADGQFFSWGRGFCG 236

Query: 354 ALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGF-PDR 412
             G      ++LP PLS        +V        +L   G V+  G     +L   P++
Sbjct: 237 --GPDVHAPQSLPSPLS------FREVAVGWNHALLLTVDGEVFKLG----STLNKQPEK 284

Query: 413 GV----SDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 463
                 S + L  ++ D      V QI+ G  H+  VT+ G +  +G  E  QLG
Sbjct: 285 QQLQIDSSEALFEKVPD-FDGVKVMQIAAGAEHSAAVTENGEVKTWGWGEHGQLG 338



 Score = 89.0 bits (219), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 56/179 (31%), Positives = 93/179 (51%), Gaps = 5/179 (2%)

Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 349
           V+S+G+G++  LG  +  DEL P+ +       I ++  + G  HV+AL S G V+TWG+
Sbjct: 17  VWSWGAGTDGQLGTTKLQDELLPQLLSLTSLPSISML--ACGGAHVIALTSGGKVFTWGR 74

Query: 350 GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGF 409
           G  G LGHGD ++ TLP+ +S     +  Q  A    +  + D+G ++  G   FG LG 
Sbjct: 75  GSSGQLGHGDILNITLPKLVSFFDDSVITQAAAGWSHSGFVSDSGCIFTCGNGSFGQLGH 134

Query: 410 PDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLR 468
            D   +  +  P  +       V  ++ G+ H++V+    ++ GFG  +R QLG  + R
Sbjct: 135 GD---TLSLSTPAKVSHFNNDSVKMVACGMRHSLVLFAGNQVCGFGSGKRGQLGFSSDR 190



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 84/307 (27%), Positives = 127/307 (41%), Gaps = 54/307 (17%)

Query: 113 NMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +M    G +   L S   VF+ G    G LGHG +         ++F   + + Q +A  
Sbjct: 51  SMLACGGAHVIALTSGGKVFTWGRGSSGQLGHG-DILNITLPKLVSFFDDSVITQAAAGW 109

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
           +H+ FV  SG +FTCG+ S    GH DT   +  P  V        K V  G+  +  L 
Sbjct: 110 SHSGFVSDSGCIFTCGNGSFGQLGHGDT-LSLSTPAKVSHFNNDSVKMVACGMRHSLVLF 168

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPT--PKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 290
               V   GS   GQLG      +    P  ++ L++V  VV+I+A   +  A++ +G  
Sbjct: 169 AGNQVCGFGSGKRGQLGFSSDRIKSVNLPCVVSGLKDV-EVVRISANGDHSAAISADGQF 227

Query: 291 YSFGSGSNFCLG------------------------------HGE------------QHD 308
           +S+G G  FC G                               GE            +  
Sbjct: 228 FSWGRG--FCGGPDVHAPQSLPSPLSFREVAVGWNHALLLTVDGEVFKLGSTLNKQPEKQ 285

Query: 309 ELQPRAIQTFRRK-----GIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK 363
           +LQ  + +    K     G+ V++++AG EH  A+  +G V TWG G  G LG G+  D+
Sbjct: 286 QLQIDSSEALFEKVPDFDGVKVMQIAAGAEHSAAVTENGEVKTWGWGEHGQLGLGNTNDQ 345

Query: 364 TLPEPLS 370
           T PE +S
Sbjct: 346 TSPELVS 352


>gi|440901734|gb|ELR52623.1| Serine/threonine-protein kinase Nek9, partial [Bos grunniens mutus]
          Length = 888

 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 84/275 (30%), Positives = 129/275 (46%), Gaps = 21/275 (7%)

Query: 207 PRLVEALK-GVPCKQVTAGLNFTGFLTIRGHVHTC-----GSNTHGQLGHGDTLDRPTPK 260
           P+ ++ +K G   +QV AG      +T+   ++T      G+  HGQLGHGD      PK
Sbjct: 374 PQKLDVIKSGCSARQVCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDKASYRQPK 433

Query: 261 SIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH--DELQPRAIQTF 318
            +  L+   ++ Q++ G  + + VT  G +Y+FGS    C+G  +    + L+P  +  F
Sbjct: 434 HVEKLQG-KAIRQVSCGDDFTVCVTDEGQLYAFGSDYYGCMGVDKVAGAEVLEPMQLDFF 492

Query: 319 RRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAV 378
               +   +VS GD HVV L  +  VY+WG G  G LG   E D   P+ +   K+ + V
Sbjct: 493 LSNPVE--QVSCGDNHVVVLTRNKEVYSWGCGEYGRLGLDSEEDYYTPQKVDVPKALIIV 550

Query: 379 QVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD--RGVSD-----KVLRP---RILDSLR 428
            V      TF+L  +G V   G   F  LG      G+ +     +V  P    +   L 
Sbjct: 551 AVQCGCDGTFLLTQSGKVLACGLNEFNKLGLNQCMSGIINHEAYHEVPYPTSFTLAKQLS 610

Query: 429 AHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 463
            + +  I+ G  HT  + +RGRL  FG N+  QLG
Sbjct: 611 FYKIRTIAPGKTHTAALDERGRLLTFGCNKCGQLG 645



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 47/164 (28%), Positives = 74/164 (45%), Gaps = 6/164 (3%)

Query: 320 RKGIHVVRVSAGDEHVVALDSSGYVYTW-----GKGYCGALGHGDEIDKTLPEPLSSLKS 374
           + G    +V AG+ H   +     +YTW     G    G LGHGD+     P+ +  L+ 
Sbjct: 381 KSGCSARQVCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDKASYRQPKHVEKLQG 440

Query: 375 HLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQ 434
               QV      T  + D G +Y FG   +G +G  D+    +VL P  LD   ++ V Q
Sbjct: 441 KAIRQVSCGDDFTVCVTDEGQLYAFGSDYYGCMGV-DKVAGAEVLEPMQLDFFLSNPVEQ 499

Query: 435 ISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFI 478
           +S G  H VV+T    ++ +G  E  +LG D+      P ++ +
Sbjct: 500 VSCGDNHVVVLTRNKEVYSWGCGEYGRLGLDSEEDYYTPQKVDV 543



 Score = 69.7 bits (169), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 73/304 (24%), Positives = 126/304 (41%), Gaps = 34/304 (11%)

Query: 115 QITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPET-TQCVSFTRINFPSAAHVVQVSASE 172
           Q++ G   T+ +++   +++ GS   G +G       + +   +++F  +  V QVS  +
Sbjct: 445 QVSCGDDFTVCVTDEGQLYAFGSDYYGCMGVDKVAGAEVLEPMQLDFFLSNPVEQVSCGD 504

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHR-----DTNRPIFRPRLVEALKGVPCKQVTAGLNF 227
           NH   + ++ +V++ G      CG       D+    + P+ V+  K +    V  G + 
Sbjct: 505 NHVVVLTRNKEVYSWG------CGEYGRLGLDSEEDYYTPQKVDVPKALIIVAVQCGCDG 558

Query: 228 TGFLTIRGHVHTCGSNTHGQLG----------HGDTLDRPTPKSIAPLEEVG--SVVQIA 275
           T  LT  G V  CG N   +LG          H    + P P S    +++    +  IA
Sbjct: 559 TFLLTQSGKVLACGLNEFNKLGLNQCMSGIINHEAYHEVPYPTSFTLAKQLSFYKIRTIA 618

Query: 276 AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHV 335
            G ++  A+   G + +FG      LG G     L    +      G  V+RVS GDE  
Sbjct: 619 PGKTHTAALDERGRLLTFGCNKCGQLGVGNYKKRLGINLLGG-PLGGKQVIRVSCGDEFT 677

Query: 336 VALDSSGYVYTWGKGYCGALG-------HGDEIDKTLPEPLSSLKSHLAVQVCARKRKTF 388
           +A     +++ WG G  G L        HG +I  + P P+     H+    C R   T 
Sbjct: 678 IAATDDNHIFAWGNGGNGRLAMTPTERPHGSDICTSWPRPIFGSLHHVPDLSC-RGWNTI 736

Query: 389 VLVD 392
           ++V+
Sbjct: 737 LIVE 740



 Score = 65.5 bits (158), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 98/388 (25%), Positives = 156/388 (40%), Gaps = 47/388 (12%)

Query: 113 NMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           N      R  T+  +  +V +  +S   V G G  T Q +   +    S     QV A  
Sbjct: 338 NAPTKRPRSSTVTEAPIAVVTSRTSEVYVWGGGKSTPQKLDVIK----SGCSARQVCAGN 393

Query: 173 NHAAFVLQSGQVFTC-----GDNSSFCCGHRDTNRPIFR-PRLVEALKGVPCKQVTAGLN 226
            H A V    +++T      G       GH D  +  +R P+ VE L+G   +QV+ G +
Sbjct: 394 THFAVVTVEKELYTWVNMQGGTKLHGQLGHGD--KASYRQPKHVEKLQGKAIRQVSCGDD 451

Query: 227 FTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPT-PKSIAPLE----EVGSVVQIAAGPSYM 281
           FT  +T  G ++  GS+ +G +G    +D+    + + P++        V Q++ G +++
Sbjct: 452 FTVCVTDEGQLYAFGSDYYGCMG----VDKVAGAEVLEPMQLDFFLSNPVEQVSCGDNHV 507

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 341
           + +T N  VYS+G G    LG   + D   P+ +     K + +V V  G +    L  S
Sbjct: 508 VVLTRNKEVYSWGCGEYGRLGLDSEEDYYTPQKVDV--PKALIIVAVQCGCDGTFLLTQS 565

Query: 342 GYVYTWGKGYCGALGHGD--------EIDKTLPEPLS-SLKSHLAV----QVCARKRKTF 388
           G V   G      LG           E    +P P S +L   L+      +   K  T 
Sbjct: 566 GKVLACGLNEFNKLGLNQCMSGIINHEAYHEVPYPTSFTLAKQLSFYKIRTIAPGKTHTA 625

Query: 389 VLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRIL-DSLRAHHVSQISTGLYHTVVVTD 447
            L + G +  FG    G LG    G   K L   +L   L    V ++S G   T+  TD
Sbjct: 626 ALDERGRLLTFGCNKCGQLGV---GNYKKRLGINLLGGPLGGKQVIRVSCGDEFTIAATD 682

Query: 448 RGRLFGFGDNERAQLGHDTLRGCLEPTE 475
              +F +G+    +L        + PTE
Sbjct: 683 DNHIFAWGNGGNGRLA-------MTPTE 703



 Score = 49.3 bits (116), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 42/138 (30%), Positives = 63/138 (45%), Gaps = 17/138 (12%)

Query: 344 VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHL-AVQVCARKRKTFVLVDTGSVYGFGWM 402
           VY WG G            K+ P+ L  +KS   A QVCA      V+     +Y +  M
Sbjct: 364 VYVWGGG------------KSTPQKLDVIKSGCSARQVCAGNTHFAVVTVEKELYTWVNM 411

Query: 403 GFGSLGFPDRGVSDKV--LRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERA 460
             G+      G  DK    +P+ ++ L+   + Q+S G   TV VTD G+L+ FG +   
Sbjct: 412 QGGTKLHGQLGHGDKASYRQPKHVEKLQGKAIRQVSCGDDFTVCVTDEGQLYAFGSDYYG 471

Query: 461 QLGHDTLRGC--LEPTEI 476
            +G D + G   LEP ++
Sbjct: 472 CMGVDKVAGAEVLEPMQL 489


>gi|351705119|gb|EHB08038.1| RCC1 and BTB domain-containing protein 2 [Heterocephalus glaber]
          Length = 527

 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 81/282 (28%), Positives = 131/282 (46%), Gaps = 10/282 (3%)

Query: 203 PIFRPRLVEALKGV--PCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPK 260
           PIF     E L+ +   C    AG N   + TI   +   G+N  G LG GD      P+
Sbjct: 8   PIFSLCSEEELQLIRQACVFGNAG-NEVLYTTINDEIFVLGTNCSGCLGLGDVQSTLEPR 66

Query: 261 SIAPLEEVG-SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFR 319
            +  L +   + +   +GP  +LA T  G V+++G      LG+G  +  L P  + T  
Sbjct: 67  RLDSLSDKKIACLSYGSGPHIILATT-EGEVFTWGHNGYTQLGNGTTNHGLVPCQVST-N 124

Query: 320 RKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLS-SLKSHLAV 378
                V+ V+ G  H + L S G VY WG    G +G G   ++ +P  ++  L++ + V
Sbjct: 125 LSNKQVIEVACGSYHSLVLTSDGEVYAWGYNNSGQVGSGSTANQAIPRRVTGCLQNKVVV 184

Query: 379 QVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTG 438
            +   +  +  +VDTG VY +G+ G G LG    G      R   L  +R   V +++ G
Sbjct: 185 NIACGQMCSVAVVDTGEVYVWGYNGNGQLGLGSSGNQPTPCRVAALQGIR---VQRVACG 241

Query: 439 LYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQE 480
             HT+V+TD G+++ +G N   QLG         PT + +++
Sbjct: 242 FAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPVVVEK 283



 Score = 95.5 bits (236), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 78/275 (28%), Positives = 118/275 (42%), Gaps = 5/275 (1%)

Query: 128 NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS-ASENHAAFVLQSGQVFT 186
           N  +F  G++  G LG G +    +   R++  S   +  +S  S  H       G+VFT
Sbjct: 40  NDEIFVLGTNCSGCLGLG-DVQSTLEPRRLDSLSDKKIACLSYGSGPHIILATTEGEVFT 98

Query: 187 CGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHG 246
            G N     G+  TN  +   ++   L      +V  G   +  LT  G V+  G N  G
Sbjct: 99  WGHNGYTQLGNGTTNHGLVPCQVSTNLSNKQVIEVACGSYHSLVLTSDGEVYAWGYNNSG 158

Query: 247 QLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ 306
           Q+G G T ++  P+ +    +   VV IA G    +AV   G VY +G   N  LG G  
Sbjct: 159 QVGSGSTANQAIPRRVTGCLQNKVVVNIACGQMCSVAVVDTGEVYVWGYNGNGQLGLGSS 218

Query: 307 HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP 366
            +  QP   +    +GI V RV+ G  H + L   G VY WG    G LG G++ +++ P
Sbjct: 219 GN--QPTPCRVAALQGIRVQRVACGFAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYP 276

Query: 367 EPLSSLKSH-LAVQVCARKRKTFVLVDTGSVYGFG 400
            P+   K   + +  C     +      G VY +G
Sbjct: 277 TPVVVEKDRIIEIAACHSTHTSAAKTQGGHVYMWG 311



 Score = 89.4 bits (220), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 67/238 (28%), Positives = 111/238 (46%), Gaps = 5/238 (2%)

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEAL--KGVPCKQVTAGLNFTGF 230
           N   +   + ++F  G N S C G  D  +    PR +++L  K + C    +G +    
Sbjct: 32  NEVLYTTINDEIFVLGTNCSGCLGLGDV-QSTLEPRRLDSLSDKKIACLSYGSGPHII-L 89

Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 290
            T  G V T G N + QLG+G T     P  ++       V+++A G  + L +T +G V
Sbjct: 90  ATTEGEVFTWGHNGYTQLGNGTTNHGLVPCQVSTNLSNKQVIEVACGSYHSLVLTSDGEV 149

Query: 291 YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKG 350
           Y++G  ++  +G G   ++  PR +    +  + VV ++ G    VA+  +G VY WG  
Sbjct: 150 YAWGYNNSGQVGSGSTANQAIPRRVTGCLQNKV-VVNIACGQMCSVAVVDTGEVYVWGYN 208

Query: 351 YCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLG 408
             G LG G   ++  P  +++L+     +V      T VL D G VY +G   +G LG
Sbjct: 209 GNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGFAHTLVLTDEGQVYAWGANSYGQLG 266


>gi|334330728|ref|XP_001378629.2| PREDICTED: RCC1 and BTB domain-containing protein 1 [Monodelphis
           domestica]
          Length = 531

 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 77/255 (30%), Positives = 123/255 (48%), Gaps = 11/255 (4%)

Query: 230 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGSVVQIAAGPSYMLAVTGN 287
           ++T    V   G N    LG GD      PK +  L  +++ S+    +GP  +L+ T +
Sbjct: 36  YVTHNDEVFVFGLNCSNCLGTGDNQSTIVPKKLEALCGKKIKSL-SYGSGPHVLLS-TED 93

Query: 288 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGI-HVVRVSAGDEHVVALDSSGYVYT 346
           G+VY++G      LG+G  +  + P  IQ      I  V+ V+ G  H +AL + G VY 
Sbjct: 94  GMVYAWGHNGYSQLGNGTTNQGIAP--IQVCTNLLIKQVIEVACGSHHSMALAADGEVYA 151

Query: 347 WGKGYCGALGHGDEIDKTLPEPLSS-LKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFG 405
           WG   CG +G G   ++  P  +++ L     V +   +  +  ++D G VYG+G+ G G
Sbjct: 152 WGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVSIACGQTSSMAVLDNGEVYGWGYNGNG 211

Query: 406 SLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHD 465
            LG  + G     L P  + +L +  V QI  G  HT+ +TD G L+ +G N   QLG  
Sbjct: 212 QLGLGNNG---NQLTPCRVAALHSVCVLQIVCGYAHTLALTDEGLLYAWGANTYGQLGTG 268

Query: 466 TLRGCLEPTEIFIQE 480
                L P +I +++
Sbjct: 269 NKSNLLSPAQIMVEK 283



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 73/255 (28%), Positives = 119/255 (46%), Gaps = 12/255 (4%)

Query: 171 SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
           S N A +V  + +VF  G N S C G  D N+    P+ +EAL G   K ++ G      
Sbjct: 30  SANEAIYVTHNDEVFVFGLNCSNCLGTGD-NQSTIVPKKLEALCGKKIKSLSYGSGPHVL 88

Query: 231 LTIR-GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 289
           L+   G V+  G N + QLG+G T     P  +     +  V+++A G  + +A+  +G 
Sbjct: 89  LSTEDGMVYAWGHNGYSQLGNGTTNQGIAPIQVCTNLLIKQVIEVACGSHHSMALAADGE 148

Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAIQT---FRRKGIHVVRVSAGDEHVVALDSSGYVYT 346
           VY++G  +   +G G   ++  PR +      +R    VV ++ G    +A+  +G VY 
Sbjct: 149 VYAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKR----VVSIACGQTSSMAVLDNGEVYG 204

Query: 347 WGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGS 406
           WG    G LG G+  ++  P  +++L S   +Q+      T  L D G +Y +G   +G 
Sbjct: 205 WGYNGNGQLGLGNNGNQLTPCRVAALHSVCVLQIVCGYAHTLALTDEGLLYAWGANTYGQ 264

Query: 407 LGFPDRGVSDKVLRP 421
           LG    G    +L P
Sbjct: 265 LG---TGNKSNLLSP 276



 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 63/228 (27%), Positives = 99/228 (43%), Gaps = 3/228 (1%)

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
           H     + G V+  G N     G+  TN+ I   ++   L      +V  G + +  L  
Sbjct: 86  HVLLSTEDGMVYAWGHNGYSQLGNGTTNQGIAPIQVCTNLLIKQVIEVACGSHHSMALAA 145

Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
            G V+  G N  GQ+G G T ++PTP+ +     +  VV IA G +  +AV  NG VY +
Sbjct: 146 DGEVYAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVSIACGQTSSMAVLDNGEVYGW 205

Query: 294 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 353
           G   N  LG G   ++L P  +       + V+++  G  H +AL   G +Y WG    G
Sbjct: 206 GYNGNGQLGLGNNGNQLTPCRVAALH--SVCVLQIVCGYAHTLALTDEGLLYAWGANTYG 263

Query: 354 ALGHGDEIDKTLPEPLSSLKSHLA-VQVCARKRKTFVLVDTGSVYGFG 400
            LG G++ +   P  +   K  +  +  C     +      G VY +G
Sbjct: 264 QLGTGNKSNLLSPAQIMVEKERVVEIAACHSAHTSAAKTQGGHVYMWG 311



 Score = 59.7 bits (143), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 55/184 (29%), Positives = 86/184 (46%), Gaps = 6/184 (3%)

Query: 114 MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +++  G +H++ L ++  V++ G + CG +G G    Q       N      VV ++  +
Sbjct: 131 IEVACGSHHSMALAADGEVYAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVSIACGQ 190

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
             +  VL +G+V+  G N +   G    N     P  V AL  V   Q+  G   T  LT
Sbjct: 191 TSSMAVLDNGEVYGWGYNGNGQLG-LGNNGNQLTPCRVAALHSVCVLQIVCGYAHTLALT 249

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY--MLAVTGNGVV 290
             G ++  G+NT+GQLG G+  +  +P  I  + E   VV+IAA  S     A T  G V
Sbjct: 250 DEGLLYAWGANTYGQLGTGNKSNLLSPAQI--MVEKERVVEIAACHSAHTSAAKTQGGHV 307

Query: 291 YSFG 294
           Y +G
Sbjct: 308 YMWG 311


>gi|444511454|gb|ELV09900.1| Serine/threonine-protein kinase Nek9 [Tupaia chinensis]
          Length = 674

 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 82/276 (29%), Positives = 128/276 (46%), Gaps = 23/276 (8%)

Query: 207 PRLVEALK-GVPCKQVTAGLNFTGFLTIRGHVHTC-----GSNTHGQLGHGDTLDRPTPK 260
           P+ ++ +K G   +QV AG      +T+   ++T      G+  HGQLGHGD      PK
Sbjct: 165 PQKLDVIKSGCSARQVCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDKASYRQPK 224

Query: 261 SIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH--DELQPRAIQTF 318
            +  L+   ++ Q++ G  + + VT  G +Y+FGS    C+G  +    + L+P  +  F
Sbjct: 225 HVEKLQG-KAIRQVSCGDDFTVCVTDEGQLYAFGSDYYGCMGVDKVAGPEVLEPMQLNFF 283

Query: 319 RRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAV 378
               +   +VS GD HVV L  +  VY+WG G  G LG   E D   P+ +   K+ + V
Sbjct: 284 LNNPVE--QVSCGDNHVVVLTRNKEVYSWGCGEYGRLGLDSEEDYYTPQKVDVPKALIIV 341

Query: 379 QVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRP-----------RILDSL 427
            V      TF+L  +G V   G   F  LG  ++ +S  +               +   L
Sbjct: 342 AVQCGCDGTFLLTQSGKVLACGLNEFNKLGL-NQCMSGIINHEAYHEVPYTTSFTLAKQL 400

Query: 428 RAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 463
             + +  I+ G  HT  + +RGRL  FG N+  QLG
Sbjct: 401 SFYKIRTIAPGKTHTAAIDERGRLLTFGCNKCGQLG 436



 Score = 68.9 bits (167), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 46/164 (28%), Positives = 73/164 (44%), Gaps = 6/164 (3%)

Query: 320 RKGIHVVRVSAGDEHVVALDSSGYVYTW-----GKGYCGALGHGDEIDKTLPEPLSSLKS 374
           + G    +V AG+ H   +     +YTW     G    G LGHGD+     P+ +  L+ 
Sbjct: 172 KSGCSARQVCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDKASYRQPKHVEKLQG 231

Query: 375 HLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQ 434
               QV      T  + D G +Y FG   +G +G  D+    +VL P  L+    + V Q
Sbjct: 232 KAIRQVSCGDDFTVCVTDEGQLYAFGSDYYGCMGV-DKVAGPEVLEPMQLNFFLNNPVEQ 290

Query: 435 ISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFI 478
           +S G  H VV+T    ++ +G  E  +LG D+      P ++ +
Sbjct: 291 VSCGDNHVVVLTRNKEVYSWGCGEYGRLGLDSEEDYYTPQKVDV 334



 Score = 53.1 bits (126), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 50/174 (28%), Positives = 74/174 (42%), Gaps = 21/174 (12%)

Query: 308 DELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPE 367
           DEL  R +   RR+   V          V    +  VY WG G            K+ P+
Sbjct: 123 DELLDRPLLRKRRRSSTVTEAPIA----VVTSRTSEVYVWGGG------------KSTPQ 166

Query: 368 PLSSLKSHL-AVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKV--LRPRIL 424
            L  +KS   A QVCA      V+     +Y +  M  G+      G  DK    +P+ +
Sbjct: 167 KLDVIKSGCSARQVCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDKASYRQPKHV 226

Query: 425 DSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG--CLEPTEI 476
           + L+   + Q+S G   TV VTD G+L+ FG +    +G D + G   LEP ++
Sbjct: 227 EKLQGKAIRQVSCGDDFTVCVTDEGQLYAFGSDYYGCMGVDKVAGPEVLEPMQL 280


>gi|431839139|gb|ELK01066.1| Serine/threonine-protein kinase Nek9 [Pteropus alecto]
          Length = 964

 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 81/265 (30%), Positives = 124/265 (46%), Gaps = 16/265 (6%)

Query: 207 PRLVEALK-GVPCKQVTAGLNFTGFLTIRGHVHTC-----GSNTHGQLGHGDTLDRPTPK 260
           P+ ++ +K G   +QV AG      +T+   ++T      G+  HGQLGHGD      PK
Sbjct: 358 PQKLDVIKSGCSARQVCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDKASYRQPK 417

Query: 261 SIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH--DELQPRAIQTF 318
            +  L+   ++ Q++ G  + + VT  G +Y+FGS    C+G  +    + L+P  +  F
Sbjct: 418 HVEKLQG-KAIRQVSCGDDFTVCVTDEGQLYAFGSDYYGCMGVAKVAGPEVLEPMQLNFF 476

Query: 319 RRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAV 378
               +   +VS GD HVV L  +  VY+WG G  G LG   E D   P+ +   K+ + V
Sbjct: 477 LNNPVE--QVSCGDNHVVVLTRNKEVYSWGCGEYGRLGLDSEEDYYTPQKVEVPKALIIV 534

Query: 379 QVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTG 438
            V      TF+L  +G V   G   F  LG         ++   +  S     +  I+ G
Sbjct: 535 AVQCGCDGTFLLTQSGKVLACGLNEFNKLGL--NQCMSGIINHEVGTSF---GIRTIAPG 589

Query: 439 LYHTVVVTDRGRLFGFGDNERAQLG 463
             HT  + +RGRL  FG N+  QLG
Sbjct: 590 KTHTAAIDERGRLLTFGCNKCGQLG 614



 Score = 72.8 bits (177), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 78/298 (26%), Positives = 126/298 (42%), Gaps = 37/298 (12%)

Query: 115 QITTGRYHTLLISNS-SVFSCGSSLCGVLG----HGPETTQCVSFTRINFPSAAHVVQVS 169
           Q++ G   T+ +++   +++ GS   G +G     GPE  + +   ++NF     V QVS
Sbjct: 429 QVSCGDDFTVCVTDEGQLYAFGSDYYGCMGVAKVAGPEVLEPM---QLNFFLNNPVEQVS 485

Query: 170 ASENHAAFVLQSGQVFTCGDNSSFCCGHR-----DTNRPIFRPRLVEALKGVPCKQVTAG 224
             +NH   + ++ +V++ G      CG       D+    + P+ VE  K +    V  G
Sbjct: 486 CGDNHVVVLTRNKEVYSWG------CGEYGRLGLDSEEDYYTPQKVEVPKALIIVAVQCG 539

Query: 225 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS---VVQIAAGPSYM 281
            + T  LT  G V  CG N   +LG    +      S     EVG+   +  IA G ++ 
Sbjct: 540 CDGTFLLTQSGKVLACGLNEFNKLGLNQCM------SGIINHEVGTSFGIRTIAPGKTHT 593

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 341
            A+   G + +FG      LG G     L    +      G  V+RVS GDE  +A    
Sbjct: 594 AAIDERGRLLTFGCNKCGQLGVGNYKKRLGINLLGG-PLGGKQVIRVSCGDEFTIAATDD 652

Query: 342 GYVYTWGKGYCGALG-------HGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVD 392
            +++ WG G  G L        HG +I  + P P+     H+    C R   T ++V+
Sbjct: 653 NHIFAWGNGGNGRLAMTPTERPHGSDICTSWPRPIFGSLHHVPDLSC-RGWHTILIVE 709



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 94/373 (25%), Positives = 154/373 (41%), Gaps = 46/373 (12%)

Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 179
           R  T+  +  +V +  +S   V G G  T Q +   +    S     QV A   H A V 
Sbjct: 329 RSSTVTEAPIAVVTSRTSEVYVWGGGKSTPQKLDVIK----SGCSARQVCAGNTHFAVVT 384

Query: 180 QSGQVFTC-----GDNSSFCCGHRDTNRPIFR-PRLVEALKGVPCKQVTAGLNFTGFLTI 233
              +++T      G       GH D  +  +R P+ VE L+G   +QV+ G +FT  +T 
Sbjct: 385 VEKELYTWVNMQGGTKLHGQLGHGD--KASYRQPKHVEKLQGKAIRQVSCGDDFTVCVTD 442

Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE----EVGSVVQIAAGPSYMLAVTGNGV 289
            G ++  GS+ +G +G         P+ + P++        V Q++ G ++++ +T N  
Sbjct: 443 EGQLYAFGSDYYGCMGVAKVAG---PEVLEPMQLNFFLNNPVEQVSCGDNHVVVLTRNKE 499

Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 349
           VYS+G G    LG   + D   P+ ++    K + +V V  G +    L  SG V   G 
Sbjct: 500 VYSWGCGEYGRLGLDSEEDYYTPQKVEV--PKALIIVAVQCGCDGTFLLTQSGKVLACGL 557

Query: 350 GYCGALGHGDEIDKTLPEPLSSLKSH-----LAVQVCAR-KRKTFVLVDTGSVYGFGWMG 403
                LG        L + +S + +H       ++  A  K  T  + + G +  FG   
Sbjct: 558 NEFNKLG--------LNQCMSGIINHEVGTSFGIRTIAPGKTHTAAIDERGRLLTFGCNK 609

Query: 404 FGSLGFPDRGVSDKVLRPRIL-DSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQL 462
            G LG    G   K L   +L   L    V ++S G   T+  TD   +F +G+    +L
Sbjct: 610 CGQLGV---GNYKKRLGINLLGGPLGGKQVIRVSCGDEFTIAATDDNHIFAWGNGGNGRL 666

Query: 463 GHDTLRGCLEPTE 475
                   + PTE
Sbjct: 667 A-------MTPTE 672



 Score = 65.5 bits (158), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 45/164 (27%), Positives = 72/164 (43%), Gaps = 6/164 (3%)

Query: 320 RKGIHVVRVSAGDEHVVALDSSGYVYTW-----GKGYCGALGHGDEIDKTLPEPLSSLKS 374
           + G    +V AG+ H   +     +YTW     G    G LGHGD+     P+ +  L+ 
Sbjct: 365 KSGCSARQVCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDKASYRQPKHVEKLQG 424

Query: 375 HLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQ 434
               QV      T  + D G +Y FG   +G +G   +    +VL P  L+    + V Q
Sbjct: 425 KAIRQVSCGDDFTVCVTDEGQLYAFGSDYYGCMGVA-KVAGPEVLEPMQLNFFLNNPVEQ 483

Query: 435 ISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFI 478
           +S G  H VV+T    ++ +G  E  +LG D+      P ++ +
Sbjct: 484 VSCGDNHVVVLTRNKEVYSWGCGEYGRLGLDSEEDYYTPQKVEV 527


>gi|73988984|ref|XP_542558.2| PREDICTED: RCC1 and BTB domain-containing protein 1 isoform 1
           [Canis lupus familiaris]
          Length = 531

 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 78/255 (30%), Positives = 123/255 (48%), Gaps = 11/255 (4%)

Query: 230 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGSVVQIAAGPSYMLAVTGN 287
           ++T    V   G N    LG GD      PK +  L  +++ S+    +GP  +L+ T +
Sbjct: 36  YVTDNDEVFVFGLNYSNCLGTGDNQSTLVPKKLEALCGKKIKSL-SYGSGPHVLLS-TED 93

Query: 288 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGI-HVVRVSAGDEHVVALDSSGYVYT 346
           GVVY++G      LG+G  +  + P  IQ      I  VV V+ G  H +AL + G V+ 
Sbjct: 94  GVVYAWGHNGYSQLGNGTTNQGIAP--IQVCTNLLIKQVVEVACGSHHSMALAADGEVFA 151

Query: 347 WGKGYCGALGHGDEIDKTLPEPLSS-LKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFG 405
           WG   CG +G G   ++  P  +++ L     V +   +  +  ++D G VYG+G+ G G
Sbjct: 152 WGYNNCGQVGSGSTTNQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNG 211

Query: 406 SLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHD 465
            LG  + G     L P  + +L +  V+QI  G  HT+ +TD G L+ +G N   QLG  
Sbjct: 212 QLGLGNNG---NQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTG 268

Query: 466 TLRGCLEPTEIFIQE 480
                L P  I +++
Sbjct: 269 NKNNLLSPAHIMVEK 283



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 73/255 (28%), Positives = 119/255 (46%), Gaps = 12/255 (4%)

Query: 171 SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
           S N A +V  + +VF  G N S C G  D N+    P+ +EAL G   K ++ G      
Sbjct: 30  SANEALYVTDNDEVFVFGLNYSNCLGTGD-NQSTLVPKKLEALCGKKIKSLSYGSGPHVL 88

Query: 231 LTIR-GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 289
           L+   G V+  G N + QLG+G T     P  +     +  VV++A G  + +A+  +G 
Sbjct: 89  LSTEDGVVYAWGHNGYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGSHHSMALAADGE 148

Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRV---SAGDEHVVALDSSGYVYT 346
           V+++G  +   +G G   ++  PR +       +H+ RV   + G    +A+  +G VY 
Sbjct: 149 VFAWGYNNCGQVGSGSTTNQPTPRKV----TNCLHIKRVVGIACGQTSSMAVLDNGEVYG 204

Query: 347 WGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGS 406
           WG    G LG G+  ++  P  +++L S    Q+      T  L D G +Y +G   +G 
Sbjct: 205 WGYNGNGQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQ 264

Query: 407 LGFPDRGVSDKVLRP 421
           LG    G  + +L P
Sbjct: 265 LG---TGNKNNLLSP 276



 Score = 83.2 bits (204), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 74/286 (25%), Positives = 116/286 (40%), Gaps = 5/286 (1%)

Query: 117 TTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS-ASENHA 175
           T+      +  N  VF  G +    LG G   +  V   ++       +  +S  S  H 
Sbjct: 29  TSANEALYVTDNDEVFVFGLNYSNCLGTGDNQSTLVP-KKLEALCGKKIKSLSYGSGPHV 87

Query: 176 AFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRG 235
               + G V+  G N     G+  TN+ I   ++   L      +V  G + +  L   G
Sbjct: 88  LLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGSHHSMALAADG 147

Query: 236 HVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 295
            V   G N  GQ+G G T ++PTP+ +     +  VV IA G +  +AV  NG VY +G 
Sbjct: 148 EVFAWGYNNCGQVGSGSTTNQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGY 207

Query: 296 GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGAL 355
             N  LG G   ++L P  +       + V ++  G  H +AL   G +Y WG    G L
Sbjct: 208 NGNGQLGLGNNGNQLTPVRVAALH--SVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQL 265

Query: 356 GHGDEIDKTLPEPLSSLKSHLA-VQVCARKRKTFVLVDTGSVYGFG 400
           G G++ +   P  +   K  +  +  C     +      G VY +G
Sbjct: 266 GTGNKNNLLSPAHIMVEKERVVEIAACHSAHTSAAKTQGGHVYMWG 311



 Score = 62.4 bits (150), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 57/184 (30%), Positives = 87/184 (47%), Gaps = 6/184 (3%)

Query: 114 MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +++  G +H++ L ++  VF+ G + CG +G G  T Q       N      VV ++  +
Sbjct: 131 VEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTTNQPTPRKVTNCLHIKRVVGIACGQ 190

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
             +  VL +G+V+  G N +   G    N     P  V AL  V   Q+  G   T  LT
Sbjct: 191 TSSMAVLDNGEVYGWGYNGNGQLG-LGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALT 249

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY--MLAVTGNGVV 290
             G ++  G+NT+GQLG G+  +  +P  I  + E   VV+IAA  S     A T  G V
Sbjct: 250 DEGLLYAWGANTYGQLGTGNKNNLLSPAHI--MVEKERVVEIAACHSAHTSAAKTQGGHV 307

Query: 291 YSFG 294
           Y +G
Sbjct: 308 YMWG 311


>gi|410947356|ref|XP_003980415.1| PREDICTED: RCC1 and BTB domain-containing protein 1 [Felis catus]
          Length = 531

 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 78/255 (30%), Positives = 123/255 (48%), Gaps = 11/255 (4%)

Query: 230 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGSVVQIAAGPSYMLAVTGN 287
           ++T    V   G N    LG GD      PK +  L  +++ S+    +GP  +L+ T +
Sbjct: 36  YVTDNDEVFVFGLNYSNCLGTGDNQSTLVPKKLEALCGKKIKSL-SYGSGPHVLLS-TED 93

Query: 288 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGI-HVVRVSAGDEHVVALDSSGYVYT 346
           GVVY++G      LG+G  +  + P  IQ      I  VV V+ G  H +AL + G V+ 
Sbjct: 94  GVVYAWGHNGYSQLGNGTTNQGIAP--IQVCTNLLIKQVVEVACGSHHSMALAADGEVFA 151

Query: 347 WGKGYCGALGHGDEIDKTLPEPLSS-LKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFG 405
           WG   CG +G G   ++  P  +++ L     V +   +  +  ++D G VYG+G+ G G
Sbjct: 152 WGYNNCGQVGSGSTTNQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNG 211

Query: 406 SLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHD 465
            LG  + G     L P  + +L +  V+QI  G  HT+ +TD G L+ +G N   QLG  
Sbjct: 212 QLGLGNNG---NQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTG 268

Query: 466 TLRGCLEPTEIFIQE 480
                L P  I +++
Sbjct: 269 NKNNLLSPAHIMVEK 283



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 73/255 (28%), Positives = 119/255 (46%), Gaps = 12/255 (4%)

Query: 171 SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
           S N A +V  + +VF  G N S C G  D N+    P+ +EAL G   K ++ G      
Sbjct: 30  SANEALYVTDNDEVFVFGLNYSNCLGTGD-NQSTLVPKKLEALCGKKIKSLSYGSGPHVL 88

Query: 231 LTIR-GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 289
           L+   G V+  G N + QLG+G T     P  +     +  VV++A G  + +A+  +G 
Sbjct: 89  LSTEDGVVYAWGHNGYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGSHHSMALAADGE 148

Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRV---SAGDEHVVALDSSGYVYT 346
           V+++G  +   +G G   ++  PR +       +H+ RV   + G    +A+  +G VY 
Sbjct: 149 VFAWGYNNCGQVGSGSTTNQPTPRKV----TNCLHIKRVVGIACGQTSSMAVLDNGEVYG 204

Query: 347 WGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGS 406
           WG    G LG G+  ++  P  +++L S    Q+      T  L D G +Y +G   +G 
Sbjct: 205 WGYNGNGQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQ 264

Query: 407 LGFPDRGVSDKVLRP 421
           LG    G  + +L P
Sbjct: 265 LG---TGNKNNLLSP 276



 Score = 83.2 bits (204), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 74/286 (25%), Positives = 116/286 (40%), Gaps = 5/286 (1%)

Query: 117 TTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS-ASENHA 175
           T+      +  N  VF  G +    LG G   +  V   ++       +  +S  S  H 
Sbjct: 29  TSANEALYVTDNDEVFVFGLNYSNCLGTGDNQSTLVP-KKLEALCGKKIKSLSYGSGPHV 87

Query: 176 AFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRG 235
               + G V+  G N     G+  TN+ I   ++   L      +V  G + +  L   G
Sbjct: 88  LLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGSHHSMALAADG 147

Query: 236 HVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 295
            V   G N  GQ+G G T ++PTP+ +     +  VV IA G +  +AV  NG VY +G 
Sbjct: 148 EVFAWGYNNCGQVGSGSTTNQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGY 207

Query: 296 GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGAL 355
             N  LG G   ++L P  +       + V ++  G  H +AL   G +Y WG    G L
Sbjct: 208 NGNGQLGLGNNGNQLTPVRVAALH--SVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQL 265

Query: 356 GHGDEIDKTLPEPLSSLKSHLA-VQVCARKRKTFVLVDTGSVYGFG 400
           G G++ +   P  +   K  +  +  C     +      G VY +G
Sbjct: 266 GTGNKNNLLSPAHIMVEKERVVEIAACHSAHTSAAKTQGGHVYMWG 311



 Score = 62.4 bits (150), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 57/184 (30%), Positives = 87/184 (47%), Gaps = 6/184 (3%)

Query: 114 MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +++  G +H++ L ++  VF+ G + CG +G G  T Q       N      VV ++  +
Sbjct: 131 VEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTTNQPTPRKVTNCLHIKRVVGIACGQ 190

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
             +  VL +G+V+  G N +   G    N     P  V AL  V   Q+  G   T  LT
Sbjct: 191 TSSMAVLDNGEVYGWGYNGNGQLG-LGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALT 249

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY--MLAVTGNGVV 290
             G ++  G+NT+GQLG G+  +  +P  I  + E   VV+IAA  S     A T  G V
Sbjct: 250 DEGLLYAWGANTYGQLGTGNKNNLLSPAHI--MVEKERVVEIAACHSAHTSAAKTQGGHV 307

Query: 291 YSFG 294
           Y +G
Sbjct: 308 YMWG 311


>gi|324502986|gb|ADY41305.1| E3 ubiquitin-protein ligase HERC4 [Ascaris suum]
          Length = 1038

 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 93/341 (27%), Positives = 144/341 (42%), Gaps = 51/341 (14%)

Query: 82  LLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLISNS-SVFSCGSSLCG 140
            LN  +GN  +  + +     S D V   A    I TG  HTL +++   V+SCGS+  G
Sbjct: 43  FLNGDDGNIVKTPQVVVGAPTSHDGVSVRA----IATGERHTLFLADDGKVWSCGSNENG 98

Query: 141 VLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSS-------- 192
            LG G       +   +      ++VQ++A   H   V   G++F  G NS         
Sbjct: 99  ELGRGGCQEGSFTIYPVLLSGGVNIVQIAAGRAHNMAVADDGRLFAWGSNSHGQLALPSN 158

Query: 193 -----------------------------------FCCGHRDTNRPIFRPRLVEALKGVP 217
                                              F  G +   R ++ P+ +E    +P
Sbjct: 159 ITSTDIPKRVVSLTETVQVACGTDHTIAIVESGRIFVWGLQPDGRVLYAPKEIEFFMALP 218

Query: 218 CKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAG 277
             QV AG ++   LT+ G +   GSN +GQLG  D  +R TP  +  L  + +VV +A G
Sbjct: 219 VVQVNAGSDYYVALTVSGAMFVWGSNEYGQLGTSDNKERTTPAEVTTLHSL-NVVHVACG 277

Query: 278 PSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
            S+ +A+T  G ++  GS S   LG G +    Q   +      G HV RV+ G  H +A
Sbjct: 278 HSHTVALTHEGRLFVCGSDSCGQLGSGRKVPS-QNTMLAVTEMLGTHVTRVACGRCHTLA 336

Query: 338 LDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAV 378
           L + G +Y +G    G LG G+   +  P P+ +L   ++V
Sbjct: 337 L-AGGKMYAFGLNSSGQLGSGNVRSQVTPRPIDALTDVVSV 376



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 84/313 (26%), Positives = 139/313 (44%), Gaps = 16/313 (5%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V  ++  E H  F+   G+V++CG N +   G        F    V    GV   Q+ AG
Sbjct: 70  VRAIATGERHTLFLADDGKVWSCGSNENGELGRGGCQEGSFTIYPVLLSGGVNIVQIAAG 129

Query: 225 LNFTGFLTIRGHVHTCGSNTHGQLG-HGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
                 +   G +   GSN+HGQL    +      PK +  L E    VQ+A G  + +A
Sbjct: 130 RAHNMAVADDGRLFAWGSNSHGQLALPSNITSTDIPKRVVSLTET---VQVACGTDHTIA 186

Query: 284 VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 343
           +  +G ++ +G   +  + +        P+ I+ F    + VV+V+AG ++ VAL  SG 
Sbjct: 187 IVESGRIFVWGLQPDGRVLYA-------PKEIEFF--MALPVVQVNAGSDYYVALTVSGA 237

Query: 344 VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 403
           ++ WG    G LG  D  ++T P  +++L S   V V      T  L   G ++  G   
Sbjct: 238 MFVWGSNEYGQLGTSDNKERTTPAEVTTLHSLNVVHVACGHSHTVALTHEGRLFVCGSDS 297

Query: 404 FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 463
            G LG   +  S   +    +  +   HV++++ G  HT+ +   G+++ FG N   QLG
Sbjct: 298 CGQLGSGRKVPSQNTMLA--VTEMLGTHVTRVACGRCHTLALAG-GKMYAFGLNSSGQLG 354

Query: 464 HDTLRGCLEPTEI 476
              +R  + P  I
Sbjct: 355 SGNVRSQVTPRPI 367


>gi|8131932|gb|AAF73142.1|AF148799_1 retinitis pigmentosa GTP-ase regulator RPGR [Canis lupus
           familiaris]
          Length = 416

 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 85/300 (28%), Positives = 142/300 (47%), Gaps = 15/300 (5%)

Query: 168 VSASENHAAFVLQSGQVFTCGDNS--SFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 225
           +S  + H A V  + +++  G N+      G + T   + +P  V+ALK    K    G 
Sbjct: 40  LSCGDEHTAVVTGNNKLYMFGSNNWGQLGLGSKST---VSKPTCVKALKPEKVKFAACGR 96

Query: 226 NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 285
           N T   T  G V+  G N  GQLG GDT +R T   I+       + Q++AG +   A+T
Sbjct: 97  NHTLVSTEGGKVYAAGGNNEGQLGLGDTEERSTFHLISFFTSQRKIKQLSAGSNTSAALT 156

Query: 286 GNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVY 345
            +G ++ +G  S   +G     +   P+ +      G  +  +S G  H   + + G +Y
Sbjct: 157 EDGELFMWGDNSEGQIGLENVTNVCVPQQVTV----GKPISWISCGYYHSAFVTTEGQLY 212

Query: 346 TWGKGYCGALGHGDE--IDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 403
           T+G+  CG LG  ++  ++  +P+P+  +   + VQV      T VL +  +VY FG   
Sbjct: 213 TFGEPECGKLGLPNQLLVNHRMPQPVPGIPGKV-VQVACGGGHTVVLTEK-AVYTFGLGQ 270

Query: 404 FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 463
           FG LG         V  P+ ++ ++   +S I+ G  HT ++TD G ++ FGD    +LG
Sbjct: 271 FGQLGLGTFLFETSV--PKAIEHIKDQKISFIACGENHTALITDMGLMYTFGDGRHGKLG 328



 Score = 79.0 bits (193), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 77/249 (30%), Positives = 118/249 (47%), Gaps = 18/249 (7%)

Query: 119 GRYHTLL-ISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINF-PSAAHVVQVSASENHAA 176
           GR HTL+      V++ G +  G LG G +T +  +F  I+F  S   + Q+SA  N +A
Sbjct: 95  GRNHTLVSTEGGKVYAAGGNNEGQLGLG-DTEERSTFHLISFFTSQRKIKQLSAGSNTSA 153

Query: 177 FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
            + + G++F  GDNS    G  +    +  P+ V    G P   ++ G   + F+T  G 
Sbjct: 154 ALTEDGELFMWGDNSEGQIGLENVTN-VCVPQQVTV--GKPISWISCGYYHSAFVTTEGQ 210

Query: 237 VHTCGSNTHGQLGHGDTL----DRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
           ++T G    G+LG  + L      P P    P    G VVQ+A G  + + +T    VY+
Sbjct: 211 LYTFGEPECGKLGLPNQLLVNHRMPQPVPGIP----GKVVQVACGGGHTVVLT-EKAVYT 265

Query: 293 FGSGSNFCLGHGEQHDELQ-PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 351
           FG G    LG G    E   P+AI+  + + I  +  + G+ H   +   G +YT+G G 
Sbjct: 266 FGLGQFGQLGLGTFLFETSVPKAIEHIKDQKISFI--ACGENHTALITDMGLMYTFGDGR 323

Query: 352 CGALGHGDE 360
            G LG G E
Sbjct: 324 HGKLGLGLE 332



 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 45/185 (24%), Positives = 74/185 (40%), Gaps = 6/185 (3%)

Query: 294 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 353
           GSG+ F  G  +  + +  +    F  +      +S GDEH   +  +  +Y +G    G
Sbjct: 10  GSGAVFTFGKTQFAENIPSK----FWFRNDVPTFLSCGDEHTAVVTGNNKLYMFGSNNWG 65

Query: 354 ALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRG 413
            LG G +   + P  + +LK          +  T V  + G VY  G    G LG  D  
Sbjct: 66  QLGLGSKSTVSKPTCVKALKPEKVKFAACGRNHTLVSTEGGKVYAAGGNNEGQLGLGDTE 125

Query: 414 VSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEP 473
                       S R   + Q+S G   +  +T+ G LF +GDN   Q+G + +     P
Sbjct: 126 ERSTFHLISFFTSQR--KIKQLSAGSNTSAALTEDGELFMWGDNSEGQIGLENVTNVCVP 183

Query: 474 TEIFI 478
            ++ +
Sbjct: 184 QQVTV 188



 Score = 52.8 bits (125), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 50/165 (30%), Positives = 82/165 (49%), Gaps = 11/165 (6%)

Query: 168 VSASENHAAFVLQSGQVFTCGDNSSFCCGHRD-TNRPIFRPRLVEALKGVPCK--QVTAG 224
           +S    H+AFV   GQ++T G+     CG     N+ +   R+ + + G+P K  QV  G
Sbjct: 195 ISCGYYHSAFVTTEGQLYTFGEPE---CGKLGLPNQLLVNHRMPQPVPGIPGKVVQVACG 251

Query: 225 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTL-DRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
              T  LT +  V+T G    GQLG G  L +   PK+I  +++   +  IA G ++   
Sbjct: 252 GGHTVVLTEKA-VYTFGLGQFGQLGLGTFLFETSVPKAIEHIKDQ-KISFIACGENHTAL 309

Query: 284 VTGNGVVYSFGSGSNFCLGHGEQH--DELQPRAIQTFRRKGIHVV 326
           +T  G++Y+FG G +  LG G ++  ++  P     F R  + +V
Sbjct: 310 ITDMGLMYTFGDGRHGKLGLGLENSTNQFIPTLCSNFLRFIVQLV 354


>gi|340379689|ref|XP_003388359.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like
           [Amphimedon queenslandica]
          Length = 1950

 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 81/269 (30%), Positives = 121/269 (44%), Gaps = 23/269 (8%)

Query: 213 LKGVPC------KQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 266
           LK  P       + + AG   T  +   G +  CG  ++G+LG G +  + + K +    
Sbjct: 90  LKATPVPHMNNIQSIIAGQYCTFMVLHNGSMKCCGKGSYGRLGLGTSDVQTSIKDLDTFP 149

Query: 267 E---VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGI 323
           E   V S+        + LAV  NG VYS+G G    LGHG    +  P+ I     K I
Sbjct: 150 EGTLVKSMATSRGSDGHSLAVDKNGKVYSWGEGEYGKLGHGNNTTQKTPKLIAGLSNKVI 209

Query: 324 HVVRVSAGDEHVVALDSSGYVYTWGKGY--------CGALGHGDEIDKTLPEPLSSLKSH 375
               VS G+ H  A+     ++TWG+G          G LGHGD   +  P+ + +LK  
Sbjct: 210 R--SVSCGNRHSAAVTIDNELWTWGEGEHGRLGHGDTGRLGHGDTQKQIKPKVIEALKGQ 267

Query: 376 LAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQI 435
           L  +V A  + +  L  TG +Y FG      LG PD   S     P+++ SL    +  +
Sbjct: 268 LIQKVSAANQFSIALTKTGKLYSFGKGSGTGLGTPDTSYS----TPQLIQSLADVIIIDV 323

Query: 436 STGLYHTVVVTDRGRLFGFGDNERAQLGH 464
           +TG  H + +T RG ++G+G N   Q G 
Sbjct: 324 TTGDGHCLALTQRGDVYGWGTNSMGQCGQ 352



 Score = 93.2 bits (230), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 79/261 (30%), Positives = 121/261 (46%), Gaps = 20/261 (7%)

Query: 112 GNMQ-ITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS 169
            N+Q I  G+Y T ++  N S+  CG    G LG G    Q        FP    V  ++
Sbjct: 99  NNIQSIIAGQYCTFMVLHNGSMKCCGKGSYGRLGLGTSDVQTSIKDLDTFPEGTLVKSMA 158

Query: 170 AS---ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN 226
            S   + H+  V ++G+V++ G+      GH + N     P+L+  L     + V+ G  
Sbjct: 159 TSRGSDGHSLAVDKNGKVYSWGEGEYGKLGHGN-NTTQKTPKLIAGLSNKVIRSVSCGNR 217

Query: 227 FTGFLTIRGHVHTCGSNTHGQLGHGDT--------LDRPTPKSIAPLEEVGSVVQ-IAAG 277
            +  +TI   + T G   HG+LGHGDT          +  PK I  L+  G ++Q ++A 
Sbjct: 218 HSAAVTIDNELWTWGEGEHGRLGHGDTGRLGHGDTQKQIKPKVIEALK--GQLIQKVSAA 275

Query: 278 PSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
             + +A+T  G +YSFG GS   LG  +      P+ IQ+     + ++ V+ GD H +A
Sbjct: 276 NQFSIALTKTGKLYSFGKGSGTGLGTPDTSYS-TPQLIQSL--ADVIIIDVTTGDGHCLA 332

Query: 338 LDSSGYVYTWGKGYCGALGHG 358
           L   G VY WG    G  G G
Sbjct: 333 LTQRGDVYGWGTNSMGQCGQG 353



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 64/221 (28%), Positives = 108/221 (48%), Gaps = 14/221 (6%)

Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
            G V++ G   +G+LGHG+   + TPK IA L     +  ++ G  +  AVT +  ++++
Sbjct: 173 NGKVYSWGEGEYGKLGHGNNTTQKTPKLIAGLSN-KVIRSVSCGNRHSAAVTIDNELWTW 231

Query: 294 GSGSNFCLGHGEQ--------HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVY 345
           G G +  LGHG+           +++P+ I+    KG  + +VSA ++  +AL  +G +Y
Sbjct: 232 GEGEHGRLGHGDTGRLGHGDTQKQIKPKVIEAL--KGQLIQKVSAANQFSIALTKTGKLY 289

Query: 346 TWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFG 405
           ++GKG    LG  D    T P+ + SL   + + V         L   G VYG+G    G
Sbjct: 290 SFGKGSGTGLGTPDTSYST-PQLIQSLADVIIIDVTTGDGHCLALTQRGDVYGWGTNSMG 348

Query: 406 SLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT 446
             G      ++ + +P  ++ L    V QIS G  H++V T
Sbjct: 349 QCGQGHN--NNSISKPGKVEGLDGVQVQQISAGTSHSIVWT 387



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 68/251 (27%), Positives = 115/251 (45%), Gaps = 22/251 (8%)

Query: 225 LNFTGFLTIRGHVHTCGSNTHGQLGHGDT--LDRPTPKSIAPLEEVGSVVQIAAGPSYML 282
           + F G L    +    GSN+  QL  G T  L + TP     +  + ++  I AG     
Sbjct: 60  MEFIGQLICEAYAF--GSNSSHQLAMGSTEKLLKATP-----VPHMNNIQSIIAGQYCTF 112

Query: 283 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRR----KGIHVVRVSAGDEHVVAL 338
            V  NG +   G GS   LG G    +   + + TF      K +   R S G  H +A+
Sbjct: 113 MVLHNGSMKCCGKGSYGRLGLGTSDVQTSIKDLDTFPEGTLVKSMATSRGSDG--HSLAV 170

Query: 339 DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVY 397
           D +G VY+WG+G  G LGHG+   +  P+ ++ L + +   V C  +    V +D   ++
Sbjct: 171 DKNGKVYSWGEGEYGKLGHGNNTTQKTPKLIAGLSNKVIRSVSCGNRHSAAVTID-NELW 229

Query: 398 GFGWMGFGSLGFPD-----RGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLF 452
            +G    G LG  D      G + K ++P+++++L+   + ++S     ++ +T  G+L+
Sbjct: 230 TWGEGEHGRLGHGDTGRLGHGDTQKQIKPKVIEALKGQLIQKVSAANQFSIALTKTGKLY 289

Query: 453 GFGDNERAQLG 463
            FG      LG
Sbjct: 290 SFGKGSGTGLG 300



 Score = 78.2 bits (191), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 71/244 (29%), Positives = 112/244 (45%), Gaps = 18/244 (7%)

Query: 122 HTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
           H+L +  N  V+S G    G LGHG  TTQ      I   S   +  VS    H+A V  
Sbjct: 166 HSLAVDKNGKVYSWGEGEYGKLGHGNNTTQKTP-KLIAGLSNKVIRSVSCGNRHSAAVTI 224

Query: 181 SGQVFTCGDNSSFCCGHRDTNR-------PIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
             +++T G+      GH DT R          +P+++EALKG   ++V+A   F+  LT 
Sbjct: 225 DNELWTWGEGEHGRLGHGDTGRLGHGDTQKQIKPKVIEALKGQLIQKVSAANQFSIALTK 284

Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
            G +++ G  +   LG  DT    TP+ I  L +V  ++ +  G  + LA+T  G VY +
Sbjct: 285 TGKLYSFGKGSGTGLGTPDT-SYSTPQLIQSLADV-IIIDVTTGDGHCLALTQRGDVYGW 342

Query: 294 GSGSNFCLGHGEQHDEL-QPRAIQTFRRKGIHVVRVSAGDEHVVAL----DSSGYVYTWG 348
           G+ S    G G  ++ + +P  ++     G+ V ++SAG  H +      +       W 
Sbjct: 343 GTNSMGQCGQGHNNNSISKPGKVEGL--DGVQVQQISAGTSHSIVWTAIPNDRCATAVWH 400

Query: 349 KGYC 352
             YC
Sbjct: 401 WPYC 404


>gi|307109549|gb|EFN57787.1| hypothetical protein CHLNCDRAFT_10671, partial [Chlorella
           variabilis]
          Length = 272

 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 87/277 (31%), Positives = 132/277 (47%), Gaps = 13/277 (4%)

Query: 184 VFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 243
           VF  GD      G   +   +F PRLV+ LK      + AG   T  +T  G ++  GSN
Sbjct: 4   VFGRGDMGQLGDG---STEDVFVPRLVKGLKSRDVVNLAAGALHTAAVTSDGELYVMGSN 60

Query: 244 THGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH 303
              QLG     D   P  +  LE+   V ++A GP++ LAV   G V +FGS     +G 
Sbjct: 61  EESQLGVRQRSDALAPTRVTALEQF-QVQRVACGPAHTLAVVDGGAVAAFGSAEYGQVGL 119

Query: 304 GEQHDELQ-PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEID 362
           G     ++ PR ++  R   +H+VRV+AG  H +AL S+G V++ G G  GALG G    
Sbjct: 120 GPCGARVELPRVVKDLRS--MHIVRVAAGGSHTLALSSTGGVFSCGNGSFGALGRGTTEG 177

Query: 363 KTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFP----DRGVSDKV 418
             +P P+S L     VQ+   +  +  +   G V  +G  G   L  P      G  +  
Sbjct: 178 NDVPRPISRLWPLGVVQIACGENHSAAITADGRVLTWG-RGKHRL-LPAFHCGHGDFENC 235

Query: 419 LRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFG 455
             P+ + +L+     Q+S G  HTV++T+ G ++ +G
Sbjct: 236 STPKPVQALKGIVGRQVSCGDDHTVLLTEDGSVYAWG 272



 Score = 97.4 bits (241), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 78/242 (32%), Positives = 118/242 (48%), Gaps = 10/242 (4%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           VV ++A   H A V   G+++  G N     G R  +  +  P  V AL+    ++V  G
Sbjct: 35  VVNLAAGALHTAAVTSDGELYVMGSNEESQLGVRQRSDAL-APTRVTALEQFQVQRVACG 93

Query: 225 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDR-PTPKSIAPLEEVGSVVQIAAGPSYMLA 283
              T  +   G V   GS  +GQ+G G    R   P+ +  L  +  +V++AAG S+ LA
Sbjct: 94  PAHTLAVVDGGAVAAFGSAEYGQVGLGPCGARVELPRVVKDLRSM-HIVRVAAGGSHTLA 152

Query: 284 VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 343
           ++  G V+S G+GS   LG G       PR I      G  VV+++ G+ H  A+ + G 
Sbjct: 153 LSSTGGVFSCGNGSFGALGRGTTEGNDVPRPISRLWPLG--VVQIACGENHSAAITADGR 210

Query: 344 VYTWGKGYCGAL-----GHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYG 398
           V TWG+G    L     GHGD  + + P+P+ +LK  +  QV      T +L + GSVY 
Sbjct: 211 VLTWGRGKHRLLPAFHCGHGDFENCSTPKPVQALKGIVGRQVSCGDDHTVLLTEDGSVYA 270

Query: 399 FG 400
           +G
Sbjct: 271 WG 272



 Score = 77.8 bits (190), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 54/187 (28%), Positives = 85/187 (45%), Gaps = 4/187 (2%)

Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 349
           V+ FG G    LG G   D   PR ++  + +   VV ++AG  H  A+ S G +Y  G 
Sbjct: 2   VWVFGRGDMGQLGDGSTEDVFVPRLVKGLKSR--DVVNLAAGALHTAAVTSDGELYVMGS 59

Query: 350 GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGF 409
                LG     D   P  +++L+     +V      T  +VD G+V  FG   +G +G 
Sbjct: 60  NEESQLGVRQRSDALAPTRVTALEQFQVQRVACGPAHTLAVVDGGAVAAFGSAEYGQVGL 119

Query: 410 PDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG 469
              G   +V  PR++  LR+ H+ +++ G  HT+ ++  G +F  G+     LG  T  G
Sbjct: 120 GPCGA--RVELPRVVKDLRSMHIVRVAAGGSHTLALSSTGGVFSCGNGSFGALGRGTTEG 177

Query: 470 CLEPTEI 476
              P  I
Sbjct: 178 NDVPRPI 184



 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 55/188 (29%), Positives = 91/188 (48%), Gaps = 12/188 (6%)

Query: 115 QITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
           ++  G  HTL ++   +V + GS+  G +G GP   +      +    + H+V+V+A  +
Sbjct: 89  RVACGPAHTLAVVDGGAVAAFGSAEYGQVGLGPCGARVELPRVVKDLRSMHIVRVAAGGS 148

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
           H   +  +G VF+CG N SF    R T      PR +  L  +   Q+  G N +  +T 
Sbjct: 149 HTLALSSTGGVFSCG-NGSFGALGRGTTEGNDVPRPISRLWPLGVVQIACGENHSAAITA 207

Query: 234 RGHVHTCGSNTHGQL-----GHGDTLDRPTPKSIAPLEEVGSVV--QIAAGPSYMLAVTG 286
            G V T G   H  L     GHGD  +  TPK   P++ +  +V  Q++ G  + + +T 
Sbjct: 208 DGRVLTWGRGKHRLLPAFHCGHGDFENCSTPK---PVQALKGIVGRQVSCGDDHTVLLTE 264

Query: 287 NGVVYSFG 294
           +G VY++G
Sbjct: 265 DGSVYAWG 272


>gi|340502171|gb|EGR28884.1| hypothetical protein IMG5_167380 [Ichthyophthirius multifiliis]
          Length = 267

 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 63/207 (30%), Positives = 106/207 (51%), Gaps = 6/207 (2%)

Query: 259 PKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQ--PRAIQ 316
           P  I P    G + +I A  +Y +++   G V+S+GSG    LG+ E+  + Q  P+ I+
Sbjct: 48  PVQITPDYWQGKLEKIYAQSNYSMSIDTKGNVFSWGSGEFGRLGY-EKDVKYQKYPKIIE 106

Query: 317 TFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHL 376
           TF  + I V +++ G  H  A  + G +YTWG+G  G LGHG   ++ +P+ +   +   
Sbjct: 107 TFSIQNIIVTKIALGTHHSAACTNQGKLYTWGQGVNGQLGHGSNQNEEIPKKVKEFQDIR 166

Query: 377 AVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS 436
            +++      T  ++    VYG+G+   G LGF D     +V  P+ +       V QI 
Sbjct: 167 VLEIACGDSHTMAIISGNLVYGWGFNQAGQLGFQDL---SRVNLPKKIMFFNQKEVVQIQ 223

Query: 437 TGLYHTVVVTDRGRLFGFGDNERAQLG 463
            G  H++ +T  G+++ +G NE  QLG
Sbjct: 224 CGKKHSIALTVEGQVYSWGSNEYGQLG 250



 Score = 91.3 bits (225), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 69/243 (28%), Positives = 110/243 (45%), Gaps = 7/243 (2%)

Query: 184 VFTCGDNSSFCCGHRDTNRPIFRPRLV--EALKGVPCKQVTAGLNFTGFLTIRGHVHTCG 241
           V+ C D+          N  I  P  +  +  +G   +++ A  N++  +  +G+V + G
Sbjct: 25  VWGCSDDWQLGIETGPKNYQISDPVQITPDYWQG-KLEKIYAQSNYSMSIDTKGNVFSWG 83

Query: 242 SNTHGQLGH-GDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLAVTGNGVVYSFGSGSNF 299
           S   G+LG+  D   +  PK I        +V +IA G  +  A T  G +Y++G G N 
Sbjct: 84  SGEFGRLGYEKDVKYQKYPKIIETFSIQNIIVTKIALGTHHSAACTNQGKLYTWGQGVNG 143

Query: 300 CLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGD 359
            LGHG   +E  P+ ++ F+   I V+ ++ GD H +A+ S   VY WG    G LG  D
Sbjct: 144 QLGHGSNQNEEIPKKVKEFQD--IRVLEIACGDSHTMAIISGNLVYGWGFNQAGQLGFQD 201

Query: 360 EIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVL 419
                LP+ +        VQ+   K+ +  L   G VY +G   +G LG      S K+ 
Sbjct: 202 LSRVNLPKKIMFFNQKEVVQIQCGKKHSIALTVEGQVYSWGSNEYGQLGIQLGKQSGKMT 261

Query: 420 RPR 422
            P 
Sbjct: 262 CPE 264



 Score = 85.5 bits (210), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 58/230 (25%), Positives = 106/230 (46%), Gaps = 8/230 (3%)

Query: 131 VFSCGSSLCGVLGHGPETTQCVSFTRINFPS--AAHVVQVSASENHAAFVLQSGQVFTCG 188
           V+ C       +  GP+  Q     +I  P      + ++ A  N++  +   G VF+ G
Sbjct: 25  VWGCSDDWQLGIETGPKNYQISDPVQIT-PDYWQGKLEKIYAQSNYSMSIDTKGNVFSWG 83

Query: 189 DNSSFCCGHRDTNRPIFRPRLVE--ALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHG 246
                  G+    +    P+++E  +++ +   ++  G + +   T +G ++T G   +G
Sbjct: 84  SGEFGRLGYEKDVKYQKYPKIIETFSIQNIIVTKIALGTHHSAACTNQGKLYTWGQGVNG 143

Query: 247 QLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ 306
           QLGHG   +   PK +   +++  V++IA G S+ +A+    +VY +G      LG  + 
Sbjct: 144 QLGHGSNQNEEIPKKVKEFQDI-RVLEIACGDSHTMAIISGNLVYGWGFNQAGQLGFQDL 202

Query: 307 HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 356
                P+ I  F +K   VV++  G +H +AL   G VY+WG    G LG
Sbjct: 203 SRVNLPKKIMFFNQK--EVVQIQCGKKHSIALTVEGQVYSWGSNEYGQLG 250



 Score = 56.2 bits (134), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 63/259 (24%), Positives = 105/259 (40%), Gaps = 29/259 (11%)

Query: 64  LCALHSIYAGMSRNVQIELLNR-----CNGNWKRVLRFLQSVEHSSDIVETSAGNMQ--- 115
           +  +++   G+  N Q E  N+     C+ +W+  +         SD V+ +    Q   
Sbjct: 1   MAIINAPNNGLEDNAQQEYSNKLFVWGCSDDWQLGIETGPKNYQISDPVQITPDYWQGKL 60

Query: 116 ---ITTGRYHTLLISNSSVFSCGSSLCGVLGHG--------PETTQCVSFTRINFPSAAH 164
                   Y   + +  +VFS GS   G LG+         P+  +  S   I       
Sbjct: 61  EKIYAQSNYSMSIDTKGNVFSWGSGEFGRLGYEKDVKYQKYPKIIETFSIQNI------I 114

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVPCKQVTA 223
           V +++   +H+A     G+++T G   +   GH  + N  I  P+ V+  + +   ++  
Sbjct: 115 VTKIALGTHHSAACTNQGKLYTWGQGVNGQLGHGSNQNEEI--PKKVKEFQDIRVLEIAC 172

Query: 224 GLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
           G + T  +     V+  G N  GQLG  D      PK I    +   VVQI  G  + +A
Sbjct: 173 GDSHTMAIISGNLVYGWGFNQAGQLGFQDLSRVNLPKKIMFFNQ-KEVVQIQCGKKHSIA 231

Query: 284 VTGNGVVYSFGSGSNFCLG 302
           +T  G VYS+GS     LG
Sbjct: 232 LTVEGQVYSWGSNEYGQLG 250



 Score = 50.1 bits (118), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 35/160 (21%), Positives = 74/160 (46%), Gaps = 6/160 (3%)

Query: 327 RVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEID-KTLPEPLS--SLKSHLAVQVCAR 383
           ++ A   + +++D+ G V++WG G  G LG+  ++  +  P+ +   S+++ +  ++   
Sbjct: 62  KIYAQSNYSMSIDTKGNVFSWGSGEFGRLGYEKDVKYQKYPKIIETFSIQNIIVTKIALG 121

Query: 384 KRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV 443
              +    + G +Y +G    G LG    G +     P+ +   +   V +I+ G  HT+
Sbjct: 122 THHSAACTNQGKLYTWGQGVNGQLG---HGSNQNEEIPKKVKEFQDIRVLEIACGDSHTM 178

Query: 444 VVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQEMEE 483
            +     ++G+G N+  QLG   L     P +I     +E
Sbjct: 179 AIISGNLVYGWGFNQAGQLGFQDLSRVNLPKKIMFFNQKE 218


>gi|440898467|gb|ELR49962.1| RCC1 and BTB domain-containing protein 1 [Bos grunniens mutus]
          Length = 531

 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 79/255 (30%), Positives = 123/255 (48%), Gaps = 11/255 (4%)

Query: 230 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGSVVQIAAGPSYMLAVTGN 287
           ++T    V   G N    LG GD      PK +  L  +++ S+    +GP  +L+ T +
Sbjct: 36  YVTDSDEVFVFGLNYSSCLGTGDNHSTLVPKKLEALCGKKIKSL-SYGSGPHVLLS-TED 93

Query: 288 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGI-HVVRVSAGDEHVVALDSSGYVYT 346
           GVVY++G      LG+G  +  L P  IQ      I  VV V+ G  H +AL + G V+ 
Sbjct: 94  GVVYAWGHNGYSQLGNGTTNQGLAP--IQVCTNLLIKQVVEVACGSHHSMALAADGEVFA 151

Query: 347 WGKGYCGALGHGDEIDKTLPEPLSS-LKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFG 405
           WG   CG +G G   ++  P  +++ L     V +   +  +  ++D G VYG+G+ G G
Sbjct: 152 WGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNG 211

Query: 406 SLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHD 465
            LG  + G     L P  + +L +  V+QI  G  HT+ +TD G L+ +G N   QLG  
Sbjct: 212 QLGLGNNG---NQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTG 268

Query: 466 TLRGCLEPTEIFIQE 480
                L P  I +++
Sbjct: 269 NKNNLLSPAHIMVEK 283



 Score = 91.3 bits (225), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 74/255 (29%), Positives = 118/255 (46%), Gaps = 12/255 (4%)

Query: 171 SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
           S N A +V  S +VF  G N S C G  D N     P+ +EAL G   K ++ G      
Sbjct: 30  SANEALYVTDSDEVFVFGLNYSSCLGTGD-NHSTLVPKKLEALCGKKIKSLSYGSGPHVL 88

Query: 231 LTIR-GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 289
           L+   G V+  G N + QLG+G T     P  +     +  VV++A G  + +A+  +G 
Sbjct: 89  LSTEDGVVYAWGHNGYSQLGNGTTNQGLAPIQVCTNLLIKQVVEVACGSHHSMALAADGE 148

Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAIQT---FRRKGIHVVRVSAGDEHVVALDSSGYVYT 346
           V+++G  +   +G G   ++  PR +      +R    VV ++ G    +A+  +G VY 
Sbjct: 149 VFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKR----VVGIACGQTSSMAVLDNGEVYG 204

Query: 347 WGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGS 406
           WG    G LG G+  ++  P  +++L S    Q+      T  L D G +Y +G   +G 
Sbjct: 205 WGYNGNGQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQ 264

Query: 407 LGFPDRGVSDKVLRP 421
           LG    G  + +L P
Sbjct: 265 LG---TGNKNNLLSP 276



 Score = 82.4 bits (202), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 62/228 (27%), Positives = 97/228 (42%), Gaps = 3/228 (1%)

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
           H     + G V+  G N     G+  TN+ +   ++   L      +V  G + +  L  
Sbjct: 86  HVLLSTEDGVVYAWGHNGYSQLGNGTTNQGLAPIQVCTNLLIKQVVEVACGSHHSMALAA 145

Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
            G V   G N  GQ+G G T ++PTP+ +     +  VV IA G +  +AV  NG VY +
Sbjct: 146 DGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGW 205

Query: 294 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 353
           G   N  LG G   ++L P  +       + V ++  G  H +AL   G +Y WG    G
Sbjct: 206 GYNGNGQLGLGNNGNQLTPVRVAALH--SVCVNQIVCGYAHTLALTDEGLLYAWGANTYG 263

Query: 354 ALGHGDEIDKTLPEPLSSLKSH-LAVQVCARKRKTFVLVDTGSVYGFG 400
            LG G++ +   P  +   K   + +  C     +      G VY +G
Sbjct: 264 QLGTGNKNNLLSPAHIMVEKERVIEIAACHSAHTSAAKTQGGHVYMWG 311



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 55/184 (29%), Positives = 86/184 (46%), Gaps = 6/184 (3%)

Query: 114 MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +++  G +H++ L ++  VF+ G + CG +G G    Q       N      VV ++  +
Sbjct: 131 VEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQ 190

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
             +  VL +G+V+  G N +   G    N     P  V AL  V   Q+  G   T  LT
Sbjct: 191 TSSMAVLDNGEVYGWGYNGNGQLG-LGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALT 249

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY--MLAVTGNGVV 290
             G ++  G+NT+GQLG G+  +  +P  I  + E   V++IAA  S     A T  G V
Sbjct: 250 DEGLLYAWGANTYGQLGTGNKNNLLSPAHI--MVEKERVIEIAACHSAHTSAAKTQGGHV 307

Query: 291 YSFG 294
           Y +G
Sbjct: 308 YMWG 311


>gi|402876741|ref|XP_003902114.1| PREDICTED: serine/threonine-protein kinase Nek9 [Papio anubis]
          Length = 979

 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 82/275 (29%), Positives = 127/275 (46%), Gaps = 21/275 (7%)

Query: 207 PRLVEALK-GVPCKQVTAGLNFTGFLTIRGHVHTC-----GSNTHGQLGHGDTLDRPTPK 260
           P+ ++ +K G   +QV AG      +T+   ++T      G+  HGQLGHGD      PK
Sbjct: 359 PQKLDVIKSGCSARQVCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDKASYRQPK 418

Query: 261 SIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH--DELQPRAIQTF 318
            +  L+   ++ Q++ G  + + VT  G +Y+FGS    C+G  +    + L+P  +  F
Sbjct: 419 HVEKLQG-KAIHQVSCGDDFTVCVTDEGQLYAFGSDYYGCMGVDKVAGPEVLEPMQLNFF 477

Query: 319 RRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAV 378
               +   +VS GD HVV L  +  VY+WG G  G LG   E D  +P+ +   K+ + V
Sbjct: 478 LSNPVE--QVSCGDNHVVVLTRNKEVYSWGCGEYGRLGLDSEEDYYIPQKVDVPKALIIV 535

Query: 379 QVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD--RGVSDKVLRPRI--------LDSLR 428
            V      TF+L  +G V   G   F  LG      G+ +      +           L 
Sbjct: 536 AVQCGCDGTFLLTQSGKVLACGLNEFNKLGLNQCMSGIINHEAYHEVPYTTSFTLAKQLS 595

Query: 429 AHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 463
            + +  I+ G  HT  + +RGRL  FG N+  QLG
Sbjct: 596 FYKIRTIAPGKTHTAAIDERGRLLTFGCNKCGQLG 630



 Score = 70.1 bits (170), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 75/307 (24%), Positives = 128/307 (41%), Gaps = 40/307 (13%)

Query: 115 QITTGRYHTLLISNS-SVFSCGSSLCGVLG----HGPETTQCVSFTRINFPSAAHVVQVS 169
           Q++ G   T+ +++   +++ GS   G +G     GPE  + +   ++NF  +  V QVS
Sbjct: 430 QVSCGDDFTVCVTDEGQLYAFGSDYYGCMGVDKVAGPEVLEPM---QLNFFLSNPVEQVS 486

Query: 170 ASENHAAFVLQSGQVFTCGDNSSFCCGHR-----DTNRPIFRPRLVEALKGVPCKQVTAG 224
             +NH   + ++ +V++ G      CG       D+    + P+ V+  K +    V  G
Sbjct: 487 CGDNHVVVLTRNKEVYSWG------CGEYGRLGLDSEEDYYIPQKVDVPKALIIVAVQCG 540

Query: 225 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTL----------DRPTPKSIAPLEEVG--SVV 272
            + T  LT  G V  CG N   +LG    +          + P   S    +++    + 
Sbjct: 541 CDGTFLLTQSGKVLACGLNEFNKLGLNQCMSGIINHEAYHEVPYTTSFTLAKQLSFYKIR 600

Query: 273 QIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGD 332
            IA G ++  A+   G + +FG      LG G     L    +      G  V+RVS GD
Sbjct: 601 TIAPGKTHTAAIDERGRLLTFGCNKCGQLGVGNYKKRLGINLLGG-PLGGKQVIRVSCGD 659

Query: 333 EHVVALDSSGYVYTWGKGYCGALG-------HGDEIDKTLPEPLSSLKSHLAVQVCARKR 385
           E  +A     +++ WG G  G L        HG +I  + P P+     H+    C R  
Sbjct: 660 EFTIAATDDNHIFAWGNGGNGRLAMTPTERPHGSDICTSWPRPIFGSLHHVPDLSC-RGW 718

Query: 386 KTFVLVD 392
            T ++V+
Sbjct: 719 HTILIVE 725



 Score = 68.2 bits (165), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 46/164 (28%), Positives = 74/164 (45%), Gaps = 6/164 (3%)

Query: 320 RKGIHVVRVSAGDEHVVALDSSGYVYTW-----GKGYCGALGHGDEIDKTLPEPLSSLKS 374
           + G    +V AG+ H   +     +YTW     G    G LGHGD+     P+ +  L+ 
Sbjct: 366 KSGCSARQVCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDKASYRQPKHVEKLQG 425

Query: 375 HLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQ 434
               QV      T  + D G +Y FG   +G +G  D+    +VL P  L+   ++ V Q
Sbjct: 426 KAIHQVSCGDDFTVCVTDEGQLYAFGSDYYGCMGV-DKVAGPEVLEPMQLNFFLSNPVEQ 484

Query: 435 ISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFI 478
           +S G  H VV+T    ++ +G  E  +LG D+      P ++ +
Sbjct: 485 VSCGDNHVVVLTRNKEVYSWGCGEYGRLGLDSEEDYYIPQKVDV 528



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 80/375 (21%), Positives = 145/375 (38%), Gaps = 28/375 (7%)

Query: 98  QSVEHSSDIVETSAGNMQITTGRYHTLLIS-NSSVFSC-----GSSLCGVLGHGPETTQC 151
           +S     D++++     Q+  G  H  +++    +++      G+ L G LGHG + +  
Sbjct: 356 KSTPQKLDVIKSGCSARQVCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDKASY- 414

Query: 152 VSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRP-IFRPRLV 210
                +       + QVS  ++    V   GQ++  G +   C G      P +  P  +
Sbjct: 415 RQPKHVEKLQGKAIHQVSCGDDFTVCVTDEGQLYAFGSDYYGCMGVDKVAGPEVLEPMQL 474

Query: 211 EALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSI-APLEEVG 269
                 P +QV+ G N    LT    V++ G   +G+LG     D   P+ +  P   + 
Sbjct: 475 NFFLSNPVEQVSCGDNHVVVLTRNKEVYSWGCGEYGRLGLDSEEDYYIPQKVDVPKALII 534

Query: 270 SVVQIAAGPSYMLAVTGNGVVYSFGS----GSNFCL----GHGEQHDELQPRAIQTFRRK 321
             VQ     +++L  +G  +          G N C+     H   H+     +    ++ 
Sbjct: 535 VAVQCGCDGTFLLTQSGKVLACGLNEFNKLGLNQCMSGIINHEAYHEVPYTTSFTLAKQL 594

Query: 322 GIHVVR-VSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLS-SLKSHLAVQ 379
             + +R ++ G  H  A+D  G + T+G   CG LG G+   +     L   L     ++
Sbjct: 595 SFYKIRTIAPGKTHTAAIDERGRLLTFGCNKCGQLGVGNYKKRLGINLLGGPLGGKQVIR 654

Query: 380 VCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD------RGVSDKVLRPRILDSLRAHHVS 433
           V      T    D   ++ +G  G G L            +     RP I  SL  HHV 
Sbjct: 655 VSCGDEFTIAATDDNHIFAWGNGGNGRLAMTPTERPHGSDICTSWPRP-IFGSL--HHVP 711

Query: 434 QISTGLYHTVVVTDR 448
            +S   +HT+++ ++
Sbjct: 712 DLSCRGWHTILIVEK 726



 Score = 64.3 bits (155), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 96/381 (25%), Positives = 154/381 (40%), Gaps = 47/381 (12%)

Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 179
           R  T+  +  +V +  +S   V G G  T Q +   +    S     QV A   H A V 
Sbjct: 330 RSSTVTEAPIAVVTSRTSEVYVWGGGKSTPQKLDVIK----SGCSARQVCAGNTHFAVVT 385

Query: 180 QSGQVFTC-----GDNSSFCCGHRDTNRPIFR-PRLVEALKGVPCKQVTAGLNFTGFLTI 233
              +++T      G       GH D  +  +R P+ VE L+G    QV+ G +FT  +T 
Sbjct: 386 VEKELYTWVNMQGGTKLHGQLGHGD--KASYRQPKHVEKLQGKAIHQVSCGDDFTVCVTD 443

Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPT-PKSIAPLE----EVGSVVQIAAGPSYMLAVTGNG 288
            G ++  GS+ +G +G    +D+   P+ + P++        V Q++ G ++++ +T N 
Sbjct: 444 EGQLYAFGSDYYGCMG----VDKVAGPEVLEPMQLNFFLSNPVEQVSCGDNHVVVLTRNK 499

Query: 289 VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 348
            VYS+G G    LG   + D   P+ +     K + +V V  G +    L  SG V   G
Sbjct: 500 EVYSWGCGEYGRLGLDSEEDYYIPQKVDV--PKALIIVAVQCGCDGTFLLTQSGKVLACG 557

Query: 349 KGYCGALGHGD------------EIDKTLPEPLSSLKSHLAVQVCAR-KRKTFVLVDTGS 395
                 LG               E+  T    L+   S   ++  A  K  T  + + G 
Sbjct: 558 LNEFNKLGLNQCMSGIINHEAYHEVPYTTSFTLAKQLSFYKIRTIAPGKTHTAAIDERGR 617

Query: 396 VYGFGWMGFGSLGFPDRGVSDKVLRPRIL-DSLRAHHVSQISTGLYHTVVVTDRGRLFGF 454
           +  FG    G LG    G   K L   +L   L    V ++S G   T+  TD   +F +
Sbjct: 618 LLTFGCNKCGQLGV---GNYKKRLGINLLGGPLGGKQVIRVSCGDEFTIAATDDNHIFAW 674

Query: 455 GDNERAQLGHDTLRGCLEPTE 475
           G+    +L        + PTE
Sbjct: 675 GNGGNGRLA-------MTPTE 688



 Score = 49.3 bits (116), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 43/147 (29%), Positives = 65/147 (44%), Gaps = 17/147 (11%)

Query: 335 VVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHL-AVQVCARKRKTFVLVDT 393
            V    +  VY WG G            K+ P+ L  +KS   A QVCA      V+   
Sbjct: 340 AVVTSRTSEVYVWGGG------------KSTPQKLDVIKSGCSARQVCAGNTHFAVVTVE 387

Query: 394 GSVYGFGWMGFGSLGFPDRGVSDKV--LRPRILDSLRAHHVSQISTGLYHTVVVTDRGRL 451
             +Y +  M  G+      G  DK    +P+ ++ L+   + Q+S G   TV VTD G+L
Sbjct: 388 KELYTWVNMQGGTKLHGQLGHGDKASYRQPKHVEKLQGKAIHQVSCGDDFTVCVTDEGQL 447

Query: 452 FGFGDNERAQLGHDTLRG--CLEPTEI 476
           + FG +    +G D + G   LEP ++
Sbjct: 448 YAFGSDYYGCMGVDKVAGPEVLEPMQL 474


>gi|344292741|ref|XP_003418084.1| PREDICTED: X-linked retinitis pigmentosa GTPase regulator-like
           [Loxodonta africana]
          Length = 1100

 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 87/300 (29%), Positives = 140/300 (46%), Gaps = 11/300 (3%)

Query: 166 VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 225
           + +S  + H A +  + +++  G N+    G   +   ++RP  V+ALK    K    G 
Sbjct: 34  IYLSCGDEHTALITGNNKLYMFGSNNWGQLG-LGSKSAVYRPICVKALKSEKVKLAACGR 92

Query: 226 NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 285
           N T   T  G+V+  G N  GQLG GDT +R +   I+       + Q++AG +   A+T
Sbjct: 93  NHTLVSTEGGNVYATGGNNEGQLGLGDTEERNSFHLISFFTSRHKIKQLSAGANISAALT 152

Query: 286 GNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVY 345
            +G ++ +G  S   +G     +   PR +      G  +  +S G  H   +   G +Y
Sbjct: 153 EDGELFMWGDNSEGQIGLNSISNVYVPRQVTV----GKPISWISCGYYHSAFVTMEGKLY 208

Query: 346 TWGKGYCGALGHGDE--IDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 403
           T+G+  CG LG   E  I+   P+ +S + S   +QV      T VL +  +VY FG   
Sbjct: 209 TFGEPECGKLGLPSEQLINHRKPQLVSGI-SEKVIQVACGGGHTVVLTEK-AVYTFGQGR 266

Query: 404 FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 463
           FG LG        +   P IL+ ++   +  IS G  HT ++TD G ++ FGD    +LG
Sbjct: 267 FGQLGLG--SFIFQAPEPAILEHVKDQKIRHISCGENHTALITDVGHMYTFGDGRHGKLG 324



 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 73/247 (29%), Positives = 125/247 (50%), Gaps = 14/247 (5%)

Query: 119 GRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVV-QVSASENHAA 176
           GR HTL+ +   +V++ G +  G LG G +T +  SF  I+F ++ H + Q+SA  N +A
Sbjct: 91  GRNHTLVSTEGGNVYATGGNNEGQLGLG-DTEERNSFHLISFFTSRHKIKQLSAGANISA 149

Query: 177 FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 236
            + + G++F  GDNS    G    +  ++ PR V    G P   ++ G   + F+T+ G 
Sbjct: 150 ALTEDGELFMWGDNSEGQIGLNSISN-VYVPRQVTV--GKPISWISCGYYHSAFVTMEGK 206

Query: 237 VHTCGSNTHGQLG--HGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 294
           ++T G    G+LG      ++   P+ ++ + E   V+Q+A G  + + +T    VY+FG
Sbjct: 207 LYTFGEPECGKLGLPSEQLINHRKPQLVSGISE--KVIQVACGGGHTVVLT-EKAVYTFG 263

Query: 295 SGSNFCLGHGE-QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 353
            G    LG G       +P  ++  + + I    +S G+ H   +   G++YT+G G  G
Sbjct: 264 QGRFGQLGLGSFIFQAPEPAILEHVKDQKIR--HISCGENHTALITDVGHMYTFGDGRHG 321

Query: 354 ALGHGDE 360
            LG G E
Sbjct: 322 KLGLGLE 328



 Score = 58.9 bits (141), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 42/154 (27%), Positives = 69/154 (44%), Gaps = 4/154 (2%)

Query: 326 VRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSH-LAVQVCARK 384
           + +S GDEH   +  +  +Y +G    G LG G +     P  + +LKS  + +  C R 
Sbjct: 34  IYLSCGDEHTALITGNNKLYMFGSNNWGQLGLGSKSAVYRPICVKALKSEKVKLAACGRN 93

Query: 385 RKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV 444
             T V  + G+VY  G    G LG  D    +         S   H + Q+S G   +  
Sbjct: 94  H-TLVSTEGGNVYATGGNNEGQLGLGDTEERNSFHLISFFTS--RHKIKQLSAGANISAA 150

Query: 445 VTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFI 478
           +T+ G LF +GDN   Q+G +++     P ++ +
Sbjct: 151 LTEDGELFMWGDNSEGQIGLNSISNVYVPRQVTV 184



 Score = 44.7 bits (104), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 40/142 (28%), Positives = 65/142 (45%), Gaps = 12/142 (8%)

Query: 116 ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPS--AAHVVQVSASE 172
           I+ G YH+  ++    +++ G   CG LG   E  Q ++  +    S  +  V+QV+   
Sbjct: 191 ISCGYYHSAFVTMEGKLYTFGEPECGKLGLPSE--QLINHRKPQLVSGISEKVIQVACGG 248

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFR---PRLVEALKGVPCKQVTAGLNFTG 229
            H   VL    V+T G       G       IF+   P ++E +K    + ++ G N T 
Sbjct: 249 GHTV-VLTEKAVYTFGQGR---FGQLGLGSFIFQAPEPAILEHVKDQKIRHISCGENHTA 304

Query: 230 FLTIRGHVHTCGSNTHGQLGHG 251
            +T  GH++T G   HG+LG G
Sbjct: 305 LITDVGHMYTFGDGRHGKLGLG 326


>gi|358345377|ref|XP_003636756.1| Chromosome condensation regulator protein [Medicago truncatula]
 gi|355502691|gb|AES83894.1| Chromosome condensation regulator protein [Medicago truncatula]
          Length = 1170

 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 91/315 (28%), Positives = 137/315 (43%), Gaps = 38/315 (12%)

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
           HA+ V + G+VFT G+ S    GH    + + +PRLVEAL       V  G   +  +T+
Sbjct: 356 HASLVTRQGEVFTWGEESGGRLGH-GVGKNVVQPRLVEALTSTTVDFVACGEFHSCAVTM 414

Query: 234 RGHVHTCGSNTH--GQLGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSYMLAVTGNGVV 290
            G ++T G  TH  G LGHG       PK I  PL+ +  V  +A GP +   +T  G  
Sbjct: 415 TGELYTWGDGTHNAGLLGHGSNASHWIPKRIGGPLDGL-QVSFVACGPWHTALITSTG-- 471

Query: 291 YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD----------- 339
                          + +   PR + +    G+  + V+ G  H  A+            
Sbjct: 472 ---------------KENVSYPREVDSLL--GLRTIAVACGVWHTAAVVEVIATQSIASL 514

Query: 340 SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGF 399
           SSG ++TWG G    LGHGD+  +  P  + ++  +   ++      T  L  TG V+  
Sbjct: 515 SSGKLFTWGDGDKNRLGHGDKESRLNPTCVPAIIDYDFKKIACGHSLTVGLTTTGRVFTM 574

Query: 400 GWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNER 459
           G   +G LG P    SD  L   + D +    V +IS G YH  V+T +  ++ +G    
Sbjct: 575 GSTVYGQLGNPQ---SDGKLPCLVGDKIALESVEEISCGAYHVAVLTSKNEVYTWGKGSN 631

Query: 460 AQLGHDTLRGCLEPT 474
            +LGH  L     PT
Sbjct: 632 GRLGHGDLEDRKTPT 646



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 101/412 (24%), Positives = 156/412 (37%), Gaps = 83/412 (20%)

Query: 28  SAVDLAHLELTSKTFGGSHGLYPQKFRSLVDLAASQLCALHSIYAGMSRNVQIELLNRCN 87
           S  D   + ++S T   SHG  P  + +L D+         +I  G  ++V       C 
Sbjct: 277 SGTDTVRVSVSSAT--SSHGSAPDDYDALADVYIWGEIICENIKVGADKSVHF-----C- 328

Query: 88  GNWKRVLRFLQSVEHSSDIVETSAGNMQITTG-RYHTLLISNSSVFSCGSSLCGVLGHG- 145
               R    L     S+ +++       I  G R+ +L+     VF+ G    G LGHG 
Sbjct: 329 ---PRADVLLPRPLESNVVLDV----QHIACGVRHASLVTRQGEVFTWGEESGGRLGHGV 381

Query: 146 ------PETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGD---------- 189
                 P   + ++ T ++F        V+  E H+  V  +G+++T GD          
Sbjct: 382 GKNVVQPRLVEALTSTTVDF--------VACGEFHSCAVTMTGELYTWGDGTHNAGLLGH 433

Query: 190 --NSS------------------FCCGHRDT-------NRPIFRPRLVEALKGVPCKQVT 222
             N+S                    CG   T          +  PR V++L G+    V 
Sbjct: 434 GSNASHWIPKRIGGPLDGLQVSFVACGPWHTALITSTGKENVSYPREVDSLLGLRTIAVA 493

Query: 223 AGLNFTGFLT-----------IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSV 271
            G+  T  +              G + T G     +LGHGD   R  P  +  + +    
Sbjct: 494 CGVWHTAAVVEVIATQSIASLSSGKLFTWGDGDKNRLGHGDKESRLNPTCVPAIIDY-DF 552

Query: 272 VQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG 331
            +IA G S  + +T  G V++ GS     LG+ +   +L          + +    +S G
Sbjct: 553 KKIACGHSLTVGLTTTGRVFTMGSTVYGQLGNPQSDGKLPCLVGDKIALESVE--EISCG 610

Query: 332 DEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKS-HLAVQVCA 382
             HV  L S   VYTWGKG  G LGHGD  D+  P  + +LK  H+    CA
Sbjct: 611 AYHVAVLTSKNEVYTWGKGSNGRLGHGDLEDRKTPTLVEALKDRHVKYIACA 662



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 55/176 (31%), Positives = 88/176 (50%), Gaps = 6/176 (3%)

Query: 163 AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 222
           A VV+V A+++ A+  L SG++FT GD      GH D    +  P  V A+     K++ 
Sbjct: 500 AAVVEVIATQSIAS--LSSGKLFTWGDGDKNRLGHGDKESRL-NPTCVPAIIDYDFKKIA 556

Query: 223 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 282
            G + T  LT  G V T GS  +GQLG+  + D   P  +     + SV +I+ G  ++ 
Sbjct: 557 CGHSLTVGLTTTGRVFTMGSTVYGQLGNPQS-DGKLPCLVGDKIALESVEEISCGAYHVA 615

Query: 283 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
            +T    VY++G GSN  LGHG+  D   P  ++  + +  HV  ++    +  A+
Sbjct: 616 VLTSKNEVYTWGKGSNGRLGHGDLEDRKTPTLVEALKDR--HVKYIACASNYSAAI 669



 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 65/230 (28%), Positives = 96/230 (41%), Gaps = 44/230 (19%)

Query: 264 PLEE--VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRK 321
           PLE   V  V  IA G  +   VT  G V+++G  S   LGHG   + +QPR ++     
Sbjct: 338 PLESNVVLDVQHIACGVRHASLVTRQGEVFTWGEESGGRLGHGVGKNVVQPRLVEALTST 397

Query: 322 GIHVVRVSAGDEHVVALDSSGYVYTWGKGY--CGALGHGDEIDKTLPE----PLSSLKSH 375
            +  V  + G+ H  A+  +G +YTWG G    G LGHG      +P+    PL  L+  
Sbjct: 398 TVDFV--ACGEFHSCAVTMTGELYTWGDGTHNAGLLGHGSNASHWIPKRIGGPLDGLQVS 455

Query: 376 LAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQI 435
               V      T ++  TG                     + V  PR +DSL       +
Sbjct: 456 F---VACGPWHTALITSTG--------------------KENVSYPREVDSLLGLRTIAV 492

Query: 436 STGLYHTVVVTD-----------RGRLFGFGDNERAQLGHDTLRGCLEPT 474
           + G++HT  V +            G+LF +GD ++ +LGH      L PT
Sbjct: 493 ACGVWHTAAVVEVIATQSIASLSSGKLFTWGDGDKNRLGHGDKESRLNPT 542


>gi|348583549|ref|XP_003477535.1| PREDICTED: RCC1 and BTB domain-containing protein 1-like [Cavia
           porcellus]
          Length = 531

 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 78/255 (30%), Positives = 123/255 (48%), Gaps = 11/255 (4%)

Query: 230 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGSVVQIAAGPSYMLAVTGN 287
           ++T    V   G N    LG GD      PK +  L  +++ S+    +GP  +L+ T +
Sbjct: 36  YVTDNDEVFVFGLNYSNCLGTGDNQSTLVPKKLEALCGKKIKSL-SYGSGPHVLLS-TED 93

Query: 288 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGI-HVVRVSAGDEHVVALDSSGYVYT 346
           GVVY++G      LG+G  +  + P  IQ      I  VV V+ G  H +AL + G V+ 
Sbjct: 94  GVVYAWGHNGYSQLGNGTTNQGIAP--IQVCTNLLIKQVVEVACGSHHSMALAADGEVFA 151

Query: 347 WGKGYCGALGHGDEIDKTLPEPLSS-LKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFG 405
           WG   CG +G G   ++  P  +++ L     V +   +  +  ++D+G VYG+G+ G G
Sbjct: 152 WGYNNCGQVGSGSTANQPTPRKVTNCLHVKRVVGIACGQTSSMAVLDSGEVYGWGYNGNG 211

Query: 406 SLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHD 465
            LG  + G     L P  + +L    V+QI  G  HT+ +TD G L+ +G N   QLG  
Sbjct: 212 QLGLGNNG---NQLTPMRVAALHRVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTG 268

Query: 466 TLRGCLEPTEIFIQE 480
                L P  I +++
Sbjct: 269 NKNNLLNPEHIMVEK 283



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 74/256 (28%), Positives = 118/256 (46%), Gaps = 12/256 (4%)

Query: 171 SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
           S N A +V  + +VF  G N S C G  D N+    P+ +EAL G   K ++ G      
Sbjct: 30  SANEALYVTDNDEVFVFGLNYSNCLGTGD-NQSTLVPKKLEALCGKKIKSLSYGSGPHVL 88

Query: 231 LTIR-GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 289
           L+   G V+  G N + QLG+G T     P  +     +  VV++A G  + +A+  +G 
Sbjct: 89  LSTEDGVVYAWGHNGYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGSHHSMALAADGE 148

Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRV---SAGDEHVVALDSSGYVYT 346
           V+++G  +   +G G   ++  PR +       +HV RV   + G    +A+  SG VY 
Sbjct: 149 VFAWGYNNCGQVGSGSTANQPTPRKV----TNCLHVKRVVGIACGQTSSMAVLDSGEVYG 204

Query: 347 WGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGS 406
           WG    G LG G+  ++  P  +++L      Q+      T  L D G +Y +G   +G 
Sbjct: 205 WGYNGNGQLGLGNNGNQLTPMRVAALHRVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQ 264

Query: 407 LGFPDRGVSDKVLRPR 422
           LG    G  + +L P 
Sbjct: 265 LG---TGNKNNLLNPE 277



 Score = 85.9 bits (211), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 76/286 (26%), Positives = 118/286 (41%), Gaps = 5/286 (1%)

Query: 117 TTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS-ASENHA 175
           T+      +  N  VF  G +    LG G   +  V   ++       +  +S  S  H 
Sbjct: 29  TSANEALYVTDNDEVFVFGLNYSNCLGTGDNQSTLVP-KKLEALCGKKIKSLSYGSGPHV 87

Query: 176 AFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRG 235
               + G V+  G N     G+  TN+ I   ++   L      +V  G + +  L   G
Sbjct: 88  LLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGSHHSMALAADG 147

Query: 236 HVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 295
            V   G N  GQ+G G T ++PTP+ +     V  VV IA G +  +AV  +G VY +G 
Sbjct: 148 EVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHVKRVVGIACGQTSSMAVLDSGEVYGWGY 207

Query: 296 GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGAL 355
             N  LG G   ++L P  +    R  + V ++  G  H +AL   G +Y WG    G L
Sbjct: 208 NGNGQLGLGNNGNQLTPMRVAALHR--VCVNQIVCGYAHTLALTDEGLLYAWGANTYGQL 265

Query: 356 GHGDEIDKTLPEPLSSLKSHLA-VQVCARKRKTFVLVDTGSVYGFG 400
           G G++ +   PE +   K  +  +  C     +      G VY +G
Sbjct: 266 GTGNKNNLLNPEHIMVEKERVVEIAACHSTHISAAKTQGGHVYMWG 311



 Score = 63.2 bits (152), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 57/184 (30%), Positives = 87/184 (47%), Gaps = 6/184 (3%)

Query: 114 MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +++  G +H++ L ++  VF+ G + CG +G G    Q       N      VV ++  +
Sbjct: 131 VEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHVKRVVGIACGQ 190

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
             +  VL SG+V+  G N +   G    N     P  V AL  V   Q+  G   T  LT
Sbjct: 191 TSSMAVLDSGEVYGWGYNGNGQLG-LGNNGNQLTPMRVAALHRVCVNQIVCGYAHTLALT 249

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML--AVTGNGVV 290
             G ++  G+NT+GQLG G+  +   P+ I  + E   VV+IAA  S  +  A T  G V
Sbjct: 250 DEGLLYAWGANTYGQLGTGNKNNLLNPEHI--MVEKERVVEIAACHSTHISAAKTQGGHV 307

Query: 291 YSFG 294
           Y +G
Sbjct: 308 YMWG 311


>gi|344246690|gb|EGW02794.1| Serine/threonine-protein kinase Nek9 [Cricetulus griseus]
          Length = 700

 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 83/275 (30%), Positives = 127/275 (46%), Gaps = 21/275 (7%)

Query: 207 PRLVEALK-GVPCKQVTAGLNFTGFLTIRGHVHTC-----GSNTHGQLGHGDTLDRPTPK 260
           P+ ++ +K G   +QV AG      +T+   ++T      G+  HGQLGHGD      PK
Sbjct: 182 PQKLDVIKSGCSARQVCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDKASYRQPK 241

Query: 261 SIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH--DELQPRAIQTF 318
            +  L+   ++ Q++ G  + + VT  G +Y+FGS    C+G  +    + L+P  +  F
Sbjct: 242 HVEKLQG-KAIHQVSCGDDFTVCVTDEGQLYAFGSDYYGCMGVDKVSGSEVLEPMQLNFF 300

Query: 319 RRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAV 378
               +   +VS GD HVVAL  +  VY+WG G  G LG   E D   P+ +   K+ + V
Sbjct: 301 LSNPVE--QVSCGDNHVVALTRNKEVYSWGCGEYGRLGLDSEEDYYTPQRVDVPKALIIV 358

Query: 379 QVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD--RGVSDKVLRPRI--------LDSLR 428
            V      TF+L  +G V   G   F  LG      G+ +      +           L 
Sbjct: 359 AVQCGCDGTFLLTQSGKVLACGLNEFNKLGLNQCMSGIINHEAYHEVPYTTSFTLAKQLS 418

Query: 429 AHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 463
            + +  I+ G  HT  + +RGRL  FG N+  QLG
Sbjct: 419 FYKIRTIAPGKTHTAAIDERGRLLTFGCNKCGQLG 453



 Score = 68.2 bits (165), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 73/304 (24%), Positives = 127/304 (41%), Gaps = 34/304 (11%)

Query: 115 QITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPET-TQCVSFTRINFPSAAHVVQVSASE 172
           Q++ G   T+ +++   +++ GS   G +G    + ++ +   ++NF  +  V QVS  +
Sbjct: 253 QVSCGDDFTVCVTDEGQLYAFGSDYYGCMGVDKVSGSEVLEPMQLNFFLSNPVEQVSCGD 312

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHR-----DTNRPIFRPRLVEALKGVPCKQVTAGLNF 227
           NH   + ++ +V++ G      CG       D+    + P+ V+  K +    V  G + 
Sbjct: 313 NHVVALTRNKEVYSWG------CGEYGRLGLDSEEDYYTPQRVDVPKALIIVAVQCGCDG 366

Query: 228 TGFLTIRGHVHTCGSNTHGQLG----------HGDTLDRPTPKSIAPLEEVG--SVVQIA 275
           T  LT  G V  CG N   +LG          H    + P   S    +++    +  IA
Sbjct: 367 TFLLTQSGKVLACGLNEFNKLGLNQCMSGIINHEAYHEVPYTTSFTLAKQLSFYKIRTIA 426

Query: 276 AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHV 335
            G ++  A+   G + +FG      LG G     L    +      G  V+RVS GDE  
Sbjct: 427 PGKTHTAAIDERGRLLTFGCNKCGQLGVGNYKKRLGINLLGG-PLGGKQVIRVSCGDEFT 485

Query: 336 VALDSSGYVYTWGKGYCGALG-------HGDEIDKTLPEPLSSLKSHLAVQVCARKRKTF 388
           +A     +++ WG G  G L        HG +I  + P P+     H+    C R   T 
Sbjct: 486 IAATDDNHIFAWGNGGNGRLAMTPTERPHGSDICTSWPRPIFGSLHHVPDLSC-RGWHTI 544

Query: 389 VLVD 392
           ++V+
Sbjct: 545 LIVE 548



 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 80/375 (21%), Positives = 147/375 (39%), Gaps = 28/375 (7%)

Query: 98  QSVEHSSDIVETSAGNMQITTGRYHTLLIS-NSSVFSC-----GSSLCGVLGHGPETTQC 151
           +S     D++++     Q+  G  H  +++    +++      G+ L G LGHG + +  
Sbjct: 179 KSTPQKLDVIKSGCSARQVCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDKASY- 237

Query: 152 VSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCG-HRDTNRPIFRPRLV 210
                +       + QVS  ++    V   GQ++  G +   C G  + +   +  P  +
Sbjct: 238 RQPKHVEKLQGKAIHQVSCGDDFTVCVTDEGQLYAFGSDYYGCMGVDKVSGSEVLEPMQL 297

Query: 211 EALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSI-APLEEVG 269
                 P +QV+ G N    LT    V++ G   +G+LG     D  TP+ +  P   + 
Sbjct: 298 NFFLSNPVEQVSCGDNHVVALTRNKEVYSWGCGEYGRLGLDSEEDYYTPQRVDVPKALII 357

Query: 270 SVVQIAAGPSYMLAVTGNGVVYSFGS----GSNFCL----GHGEQHDELQPRAIQTFRRK 321
             VQ     +++L  +G  +          G N C+     H   H+     +    ++ 
Sbjct: 358 VAVQCGCDGTFLLTQSGKVLACGLNEFNKLGLNQCMSGIINHEAYHEVPYTTSFTLAKQL 417

Query: 322 GIHVVR-VSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLS-SLKSHLAVQ 379
             + +R ++ G  H  A+D  G + T+G   CG LG G+   +     L   L     ++
Sbjct: 418 SFYKIRTIAPGKTHTAAIDERGRLLTFGCNKCGQLGVGNYKKRLGINLLGGPLGGKQVIR 477

Query: 380 VCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD------RGVSDKVLRPRILDSLRAHHVS 433
           V      T    D   ++ +G  G G L            +     RP I  SL  HHV 
Sbjct: 478 VSCGDEFTIAATDDNHIFAWGNGGNGRLAMTPTERPHGSDICTSWPRP-IFGSL--HHVP 534

Query: 434 QISTGLYHTVVVTDR 448
            +S   +HT+++ ++
Sbjct: 535 DLSCRGWHTILIVEK 549



 Score = 66.2 bits (160), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 45/164 (27%), Positives = 72/164 (43%), Gaps = 6/164 (3%)

Query: 320 RKGIHVVRVSAGDEHVVALDSSGYVYTW-----GKGYCGALGHGDEIDKTLPEPLSSLKS 374
           + G    +V AG+ H   +     +YTW     G    G LGHGD+     P+ +  L+ 
Sbjct: 189 KSGCSARQVCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDKASYRQPKHVEKLQG 248

Query: 375 HLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQ 434
               QV      T  + D G +Y FG   +G +G  D+    +VL P  L+   ++ V Q
Sbjct: 249 KAIHQVSCGDDFTVCVTDEGQLYAFGSDYYGCMGV-DKVSGSEVLEPMQLNFFLSNPVEQ 307

Query: 435 ISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFI 478
           +S G  H V +T    ++ +G  E  +LG D+      P  + +
Sbjct: 308 VSCGDNHVVALTRNKEVYSWGCGEYGRLGLDSEEDYYTPQRVDV 351



 Score = 63.2 bits (152), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 96/381 (25%), Positives = 155/381 (40%), Gaps = 47/381 (12%)

Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 179
           R  T+  +  +V +  +S   V G G  T Q +   +    S     QV A   H A V 
Sbjct: 153 RSSTVTEAPIAVVTSRTSEVYVWGGGKSTPQKLDVIK----SGCSARQVCAGNTHFAVVT 208

Query: 180 QSGQVFTC-----GDNSSFCCGHRDTNRPIFR-PRLVEALKGVPCKQVTAGLNFTGFLTI 233
              +++T      G       GH D  +  +R P+ VE L+G    QV+ G +FT  +T 
Sbjct: 209 VEKELYTWVNMQGGTKLHGQLGHGD--KASYRQPKHVEKLQGKAIHQVSCGDDFTVCVTD 266

Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPT-PKSIAPLE----EVGSVVQIAAGPSYMLAVTGNG 288
            G ++  GS+ +G +G    +D+ +  + + P++        V Q++ G ++++A+T N 
Sbjct: 267 EGQLYAFGSDYYGCMG----VDKVSGSEVLEPMQLNFFLSNPVEQVSCGDNHVVALTRNK 322

Query: 289 VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 348
            VYS+G G    LG   + D   P+ +     K + +V V  G +    L  SG V   G
Sbjct: 323 EVYSWGCGEYGRLGLDSEEDYYTPQRVDV--PKALIIVAVQCGCDGTFLLTQSGKVLACG 380

Query: 349 KGYCGALGHGD------------EIDKTLPEPLSSLKSHLAVQVCAR-KRKTFVLVDTGS 395
                 LG               E+  T    L+   S   ++  A  K  T  + + G 
Sbjct: 381 LNEFNKLGLNQCMSGIINHEAYHEVPYTTSFTLAKQLSFYKIRTIAPGKTHTAAIDERGR 440

Query: 396 VYGFGWMGFGSLGFPDRGVSDKVLRPRIL-DSLRAHHVSQISTGLYHTVVVTDRGRLFGF 454
           +  FG    G LG    G   K L   +L   L    V ++S G   T+  TD   +F +
Sbjct: 441 LLTFGCNKCGQLGV---GNYKKRLGINLLGGPLGGKQVIRVSCGDEFTIAATDDNHIFAW 497

Query: 455 GDNERAQLGHDTLRGCLEPTE 475
           G+    +L        + PTE
Sbjct: 498 GNGGNGRLA-------MTPTE 511



 Score = 49.3 bits (116), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 43/146 (29%), Positives = 65/146 (44%), Gaps = 17/146 (11%)

Query: 336 VALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHL-AVQVCARKRKTFVLVDTG 394
           V    +  VY WG G            K+ P+ L  +KS   A QVCA      V+    
Sbjct: 164 VVTSRTSEVYVWGGG------------KSTPQKLDVIKSGCSARQVCAGNTHFAVVTVEK 211

Query: 395 SVYGFGWMGFGSLGFPDRGVSDKV--LRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLF 452
            +Y +  M  G+      G  DK    +P+ ++ L+   + Q+S G   TV VTD G+L+
Sbjct: 212 ELYTWVNMQGGTKLHGQLGHGDKASYRQPKHVEKLQGKAIHQVSCGDDFTVCVTDEGQLY 271

Query: 453 GFGDNERAQLGHDTLRG--CLEPTEI 476
            FG +    +G D + G   LEP ++
Sbjct: 272 AFGSDYYGCMGVDKVSGSEVLEPMQL 297


>gi|300794911|ref|NP_001178141.1| RCC1 and BTB domain-containing protein 1 [Bos taurus]
 gi|296481892|tpg|DAA24007.1| TPA: regulator of chromosome condensation (RCC1) and BTB (POZ)
           domain containing protein 1 [Bos taurus]
          Length = 531

 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 79/255 (30%), Positives = 123/255 (48%), Gaps = 11/255 (4%)

Query: 230 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGSVVQIAAGPSYMLAVTGN 287
           ++T    V   G N    LG GD      PK +  L  +++ S+    +GP  +L+ T +
Sbjct: 36  YVTDSDEVFVFGLNYSSCLGTGDNHSTLVPKKLEALCGKKIKSL-SYGSGPHVLLS-TED 93

Query: 288 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGI-HVVRVSAGDEHVVALDSSGYVYT 346
           GVVY++G      LG+G  +  L P  IQ      I  VV V+ G  H +AL + G V+ 
Sbjct: 94  GVVYAWGHNGYSQLGNGTTNQGLAP--IQVCTNLLIKQVVEVACGSHHSMALAADGEVFA 151

Query: 347 WGKGYCGALGHGDEIDKTLPEPLSS-LKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFG 405
           WG   CG +G G   ++  P  +++ L     V +   +  +  ++D G VYG+G+ G G
Sbjct: 152 WGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNG 211

Query: 406 SLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHD 465
            LG  + G     L P  + +L +  V+QI  G  HT+ +TD G L+ +G N   QLG  
Sbjct: 212 QLGLGNNG---NQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTG 268

Query: 466 TLRGCLEPTEIFIQE 480
                L P  I +++
Sbjct: 269 NKNNLLSPAHIMVEK 283



 Score = 91.3 bits (225), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 74/255 (29%), Positives = 118/255 (46%), Gaps = 12/255 (4%)

Query: 171 SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
           S N A +V  S +VF  G N S C G  D N     P+ +EAL G   K ++ G      
Sbjct: 30  SANEALYVTDSDEVFVFGLNYSSCLGTGD-NHSTLVPKKLEALCGKKIKSLSYGSGPHVL 88

Query: 231 LTIR-GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 289
           L+   G V+  G N + QLG+G T     P  +     +  VV++A G  + +A+  +G 
Sbjct: 89  LSTEDGVVYAWGHNGYSQLGNGTTNQGLAPIQVCTNLLIKQVVEVACGSHHSMALAADGE 148

Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAIQT---FRRKGIHVVRVSAGDEHVVALDSSGYVYT 346
           V+++G  +   +G G   ++  PR +      +R    VV ++ G    +A+  +G VY 
Sbjct: 149 VFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKR----VVGIACGQTSSMAVLDNGEVYG 204

Query: 347 WGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGS 406
           WG    G LG G+  ++  P  +++L S    Q+      T  L D G +Y +G   +G 
Sbjct: 205 WGYNGNGQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQ 264

Query: 407 LGFPDRGVSDKVLRP 421
           LG    G  + +L P
Sbjct: 265 LG---TGNKNNLLSP 276



 Score = 82.0 bits (201), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 62/228 (27%), Positives = 97/228 (42%), Gaps = 3/228 (1%)

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
           H     + G V+  G N     G+  TN+ +   ++   L      +V  G + +  L  
Sbjct: 86  HVLLSTEDGVVYAWGHNGYSQLGNGTTNQGLAPIQVCTNLLIKQVVEVACGSHHSMALAA 145

Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
            G V   G N  GQ+G G T ++PTP+ +     +  VV IA G +  +AV  NG VY +
Sbjct: 146 DGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGW 205

Query: 294 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 353
           G   N  LG G   ++L P  +       + V ++  G  H +AL   G +Y WG    G
Sbjct: 206 GYNGNGQLGLGNNGNQLTPVRVAALH--SVCVNQIVCGYAHTLALTDEGLLYAWGANTYG 263

Query: 354 ALGHGDEIDKTLPEPLSSLKSH-LAVQVCARKRKTFVLVDTGSVYGFG 400
            LG G++ +   P  +   K   + +  C     +      G VY +G
Sbjct: 264 QLGTGNKNNLLSPAHIMVEKERVIEIAACHSAHTSAAKTQGGHVYMWG 311



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 55/184 (29%), Positives = 86/184 (46%), Gaps = 6/184 (3%)

Query: 114 MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +++  G +H++ L ++  VF+ G + CG +G G    Q       N      VV ++  +
Sbjct: 131 VEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQ 190

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
             +  VL +G+V+  G N +   G    N     P  V AL  V   Q+  G   T  LT
Sbjct: 191 TSSMAVLDNGEVYGWGYNGNGQLG-LGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALT 249

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY--MLAVTGNGVV 290
             G ++  G+NT+GQLG G+  +  +P  I  + E   V++IAA  S     A T  G V
Sbjct: 250 DEGLLYAWGANTYGQLGTGNKNNLLSPAHI--MVEKERVIEIAACHSAHTSAAKTQGGHV 307

Query: 291 YSFG 294
           Y +G
Sbjct: 308 YMWG 311


>gi|194221881|ref|XP_001489975.2| PREDICTED: RCC1 and BTB domain-containing protein 1 [Equus
           caballus]
          Length = 531

 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 78/255 (30%), Positives = 123/255 (48%), Gaps = 11/255 (4%)

Query: 230 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGSVVQIAAGPSYMLAVTGN 287
           ++T    V   G N    LG GD      PK +  L  +++ S+    +GP  +L+ T +
Sbjct: 36  YVTDNDEVFVFGLNYSNCLGTGDNQSTLIPKKLEALCGKKIKSL-SYGSGPHVLLS-TED 93

Query: 288 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGI-HVVRVSAGDEHVVALDSSGYVYT 346
           GVVY++G      LG+G  +  + P  IQ      I  VV V+ G  H +AL + G V+ 
Sbjct: 94  GVVYAWGHNGYSQLGNGTTNQGIAP--IQVCTNLLIKQVVEVACGSHHSMALAADGEVFA 151

Query: 347 WGKGYCGALGHGDEIDKTLPEPLSS-LKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFG 405
           WG   CG +G G   ++  P  +++ L     V +   +  +  ++D G VYG+G+ G G
Sbjct: 152 WGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNG 211

Query: 406 SLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHD 465
            LG  + G     L P  + +L +  V+QI  G  HT+ +TD G L+ +G N   QLG  
Sbjct: 212 QLGLGNNG---NQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTG 268

Query: 466 TLRGCLEPTEIFIQE 480
                L P  I +++
Sbjct: 269 NKNNLLSPAHIMVEK 283



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 73/255 (28%), Positives = 119/255 (46%), Gaps = 12/255 (4%)

Query: 171 SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
           S N A +V  + +VF  G N S C G  D N+    P+ +EAL G   K ++ G      
Sbjct: 30  SANEALYVTDNDEVFVFGLNYSNCLGTGD-NQSTLIPKKLEALCGKKIKSLSYGSGPHVL 88

Query: 231 LTIR-GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 289
           L+   G V+  G N + QLG+G T     P  +     +  VV++A G  + +A+  +G 
Sbjct: 89  LSTEDGVVYAWGHNGYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGSHHSMALAADGE 148

Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAIQT---FRRKGIHVVRVSAGDEHVVALDSSGYVYT 346
           V+++G  +   +G G   ++  PR +      +R    VV ++ G    +A+  +G VY 
Sbjct: 149 VFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKR----VVGIACGQTSSMAVLDNGEVYG 204

Query: 347 WGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGS 406
           WG    G LG G+  ++  P  +++L S    Q+      T  L D G +Y +G   +G 
Sbjct: 205 WGYNGNGQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQ 264

Query: 407 LGFPDRGVSDKVLRP 421
           LG    G  + +L P
Sbjct: 265 LG---TGNKNNLLSP 276



 Score = 83.2 bits (204), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 63/228 (27%), Positives = 97/228 (42%), Gaps = 3/228 (1%)

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
           H     + G V+  G N     G+  TN+ I   ++   L      +V  G + +  L  
Sbjct: 86  HVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGSHHSMALAA 145

Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
            G V   G N  GQ+G G T ++PTP+ +     +  VV IA G +  +AV  NG VY +
Sbjct: 146 DGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGW 205

Query: 294 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 353
           G   N  LG G   ++L P  +       + V ++  G  H +AL   G +Y WG    G
Sbjct: 206 GYNGNGQLGLGNNGNQLTPVRVAALH--SVCVNQIVCGYAHTLALTDEGLLYAWGANTYG 263

Query: 354 ALGHGDEIDKTLPEPLSSLKSHLA-VQVCARKRKTFVLVDTGSVYGFG 400
            LG G++ +   P  +   K  +  +  C     +      G VY +G
Sbjct: 264 QLGTGNKNNLLSPAHIMVEKERVVEIAACHSAHTSAAKTQGGHVYMWG 311



 Score = 60.8 bits (146), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 56/184 (30%), Positives = 86/184 (46%), Gaps = 6/184 (3%)

Query: 114 MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +++  G +H++ L ++  VF+ G + CG +G G    Q       N      VV ++  +
Sbjct: 131 VEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQ 190

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
             +  VL +G+V+  G N +   G    N     P  V AL  V   Q+  G   T  LT
Sbjct: 191 TSSMAVLDNGEVYGWGYNGNGQLG-LGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALT 249

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY--MLAVTGNGVV 290
             G ++  G+NT+GQLG G+  +  +P  I  + E   VV+IAA  S     A T  G V
Sbjct: 250 DEGLLYAWGANTYGQLGTGNKNNLLSPAHI--MVEKERVVEIAACHSAHTSAAKTQGGHV 307

Query: 291 YSFG 294
           Y +G
Sbjct: 308 YMWG 311


>gi|403303294|ref|XP_003942271.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 2
           [Saimiri boliviensis boliviensis]
          Length = 556

 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 80/275 (29%), Positives = 122/275 (44%), Gaps = 5/275 (1%)

Query: 128 NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS-ASENHAAFVLQSGQVFT 186
           N  +F  G++ CG LG G +    +   R++  S   +  +S  S  H       G+VFT
Sbjct: 69  NDEIFVLGTNCCGCLGLG-DVQSTIEPRRLDSLSGKKIACLSYGSGPHIVLATTEGEVFT 127

Query: 187 CGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHG 246
            G N+    G+  TN  +    +   L      +V  G   +  LT  G V   G N  G
Sbjct: 128 WGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSG 187

Query: 247 QLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ 306
           Q+G G T+++P P+ +    +   VV IA G    +AV  +G VY +G   N  LG G  
Sbjct: 188 QVGSGSTINQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDSGEVYVWGYNGNGQLGLGNS 247

Query: 307 HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP 366
            +  QP   +    +GI V RV+ G  H + L   G VY WG    G LG G++ +++ P
Sbjct: 248 GN--QPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYP 305

Query: 367 EPLSSLKSH-LAVQVCARKRKTFVLVDTGSVYGFG 400
            P++  K   + +  C     +      G VY +G
Sbjct: 306 TPVTVEKDRIIEIAACHSTHTSAAKTQGGHVYMWG 340



 Score =  103 bits (256), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 80/282 (28%), Positives = 134/282 (47%), Gaps = 10/282 (3%)

Query: 203 PIFRPRLVEALKGV--PCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPK 260
           PIF     E L+ +   C   +AG N   + T+   +   G+N  G LG GD      P+
Sbjct: 37  PIFSLCSEEELQLIRQACVFGSAG-NEVLYTTVNDEIFVLGTNCCGCLGLGDVQSTIEPR 95

Query: 261 SIAPLE-EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFR 319
            +  L  +  + +   +GP  +LA T  G V+++G  +   LG+G  +  L P  I T  
Sbjct: 96  RLDSLSGKKIACLSYGSGPHIVLATT-EGEVFTWGHNAYSQLGNGTTNHGLVPCHIST-N 153

Query: 320 RKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLS-SLKSHLAV 378
                V+ V+ G  H + L S G V+ WG    G +G G  I++ +P  ++  L++ + V
Sbjct: 154 LSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTINQPIPRRVTGCLQNKVVV 213

Query: 379 QVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTG 438
            +   +     +VD+G VY +G+ G G LG  + G      R   L  +R   V +++ G
Sbjct: 214 TIACGQMCCMAVVDSGEVYVWGYNGNGQLGLGNSGNQPTPCRVAALQGIR---VQRVACG 270

Query: 439 LYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQE 480
             HT+V+TD G+++ +G N   QLG         PT + +++
Sbjct: 271 YAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPVTVEK 312



 Score = 89.4 bits (220), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 67/238 (28%), Positives = 111/238 (46%), Gaps = 5/238 (2%)

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG--VPCKQVTAGLNFTGF 230
           N   +   + ++F  G N   C G  D    I  PR +++L G  + C    +G +    
Sbjct: 61  NEVLYTTVNDEIFVLGTNCCGCLGLGDVQSTI-EPRRLDSLSGKKIACLSYGSGPHIV-L 118

Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 290
            T  G V T G N + QLG+G T     P  I+       V+++A G  + L +T +G V
Sbjct: 119 ATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEV 178

Query: 291 YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKG 350
           +++G  ++  +G G   ++  PR +    +  + VV ++ G    +A+  SG VY WG  
Sbjct: 179 FAWGYNNSGQVGSGSTINQPIPRRVTGCLQNKV-VVTIACGQMCCMAVVDSGEVYVWGYN 237

Query: 351 YCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLG 408
             G LG G+  ++  P  +++L+     +V      T VL D G VY +G   +G LG
Sbjct: 238 GNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLG 295


>gi|345323388|ref|XP_001508293.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC4
           [Ornithorhynchus anatinus]
          Length = 1006

 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 84/270 (31%), Positives = 130/270 (48%), Gaps = 8/270 (2%)

Query: 101 EHSSDIVETSAGNM-QITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR-I 157
           +    +V   A N+  ++ G  HTL +++   V++ G    G LG  P T +C+   R I
Sbjct: 22  QEREQVVALDAQNIVAVSCGDAHTLALNDKGQVYAWGLDTDGQLGL-PGTEECIRVPRNI 80

Query: 158 NFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVP 217
              S   +VQVS    H+  + +  +VF+ G N     G     +    P+L+++L G+P
Sbjct: 81  KSLSDIQIVQVSCGYYHSLALSKGSEVFSWGQNKYGQLGLGFEFKKQTSPQLIKSLLGIP 140

Query: 218 CKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAG 277
             Q+ AG   +  LT+ G +   G N  GQLG  D  DR  P  +  L     +V I  G
Sbjct: 141 FMQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRS-QKIVYICCG 199

Query: 278 PSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 337
             +  A+T  G V++FG+G    LGH     E+ PR +  F   G  V +V+ G +H  A
Sbjct: 200 EDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQVACGRQHTSA 257

Query: 338 -LDSSGYVYTWGKGYCGALGHGDEIDKTLP 366
            + SSG +Y++G G  G LG G   ++  P
Sbjct: 258 FVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 287



 Score =  105 bits (262), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 82/257 (31%), Positives = 125/257 (48%), Gaps = 9/257 (3%)

Query: 210 VEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLD-RPTPKSIAPLEEV 268
           V AL       V+ G   T  L  +G V+  G +T GQLG   T +    P++I  L ++
Sbjct: 27  VVALDAQNIVAVSCGDAHTLALNDKGQVYAWGLDTDGQLGLPGTEECIRVPRNIKSLSDI 86

Query: 269 GSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHG-EQHDELQPRAIQTFRRKGIHVVR 327
             +VQ++ G  + LA++    V+S+G      LG G E   +  P+ I++    GI  ++
Sbjct: 87  -QIVQVSCGYYHSLALSKGSEVFSWGQNKYGQLGLGFEFKKQTSPQLIKSLL--GIPFMQ 143

Query: 328 VSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKT 387
           ++AG  H   L  SG ++ WG+   G LG  DE D+ +P  L SL+S   V +C  +  T
Sbjct: 144 IAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHT 203

Query: 388 FVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHT-VVVT 446
             L   G V+ FG  G+G LG      +   + PR +  L    V+Q++ G  HT   V 
Sbjct: 204 AALTKEGGVFTFGAGGYGQLG---HNSTSHEINPRKVFELMGSIVTQVACGRQHTSAFVP 260

Query: 447 DRGRLFGFGDNERAQLG 463
             GR++ FG     QLG
Sbjct: 261 SSGRIYSFGLGGNGQLG 277



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 69/210 (32%), Positives = 112/210 (53%), Gaps = 7/210 (3%)

Query: 270 SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLG-HGEQHDELQPRAIQTFRRKGIHVVRV 328
           ++V ++ G ++ LA+   G VY++G  ++  LG  G +     PR I++     I +V+V
Sbjct: 34  NIVAVSCGDAHTLALNDKGQVYAWGLDTDGQLGLPGTEECIRVPRNIKSL--SDIQIVQV 91

Query: 329 SAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK-TLPEPLSSLKSHLAVQVCARKRKT 387
           S G  H +AL     V++WG+   G LG G E  K T P+ + SL     +Q+ A    +
Sbjct: 92  SCGYYHSLALSKGSEVFSWGQNKYGQLGLGFEFKKQTSPQLIKSLLGIPFMQIAAGGAHS 151

Query: 388 FVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTD 447
           FVL  +G+++G+G   FG LG  D   +D+ + P +L SLR+  +  I  G  HT  +T 
Sbjct: 152 FVLTLSGAIFGWGRNKFGQLGLNDE--NDRYV-PNLLKSLRSQKIVYICCGEDHTAALTK 208

Query: 448 RGRLFGFGDNERAQLGHDTLRGCLEPTEIF 477
            G +F FG     QLGH++    + P ++F
Sbjct: 209 EGGVFTFGAGGYGQLGHNSTSHEINPRKVF 238



 Score = 82.4 bits (202), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 67/206 (32%), Positives = 100/206 (48%), Gaps = 6/206 (2%)

Query: 114 MQITTGRYHTLLISN-SSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +Q++ G YH+L +S  S VFS G +  G LG G E  +  S   I        +Q++A  
Sbjct: 89  VQVSCGYYHSLALSKGSEVFSWGQNKYGQLGLGFEFKKQTSPQLIKSLLGIPFMQIAAGG 148

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
            H+  +  SG +F  G N     G  D N   + P L+++L+      +  G + T  LT
Sbjct: 149 AHSFVLTLSGAIFGWGRNKFGQLGLNDENDR-YVPNLLKSLRSQKIVYICCGEDHTAALT 207

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVV 290
             G V T G+  +GQLGH  T     P+ +   E +GS+V Q+A G  +  A V  +G +
Sbjct: 208 KEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQVACGRQHTSAFVPSSGRI 265

Query: 291 YSFGSGSNFCLGHGEQHDELQPRAIQ 316
           YSFG G N  LG G   +   P  ++
Sbjct: 266 YSFGLGGNGQLGTGSTSNRKSPFTVK 291



 Score = 52.0 bits (123), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 31/97 (31%), Positives = 47/97 (48%), Gaps = 2/97 (2%)

Query: 367 EPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDS 426
           E + +L +   V V      T  L D G VY +G    G LG P  G  + +  PR + S
Sbjct: 25  EQVVALDAQNIVAVSCGDAHTLALNDKGQVYAWGLDTDGQLGLP--GTEECIRVPRNIKS 82

Query: 427 LRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 463
           L    + Q+S G YH++ ++    +F +G N+  QLG
Sbjct: 83  LSDIQIVQVSCGYYHSLALSKGSEVFSWGQNKYGQLG 119


>gi|66818759|ref|XP_643039.1| hypothetical protein DDB_G0276695 [Dictyostelium discoideum AX4]
 gi|60471137|gb|EAL69105.1| hypothetical protein DDB_G0276695 [Dictyostelium discoideum AX4]
          Length = 646

 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 91/308 (29%), Positives = 143/308 (46%), Gaps = 34/308 (11%)

Query: 182 GQVFTCGDNSSFCCGHRDTNRPIFRPRLV---EALKGVPCKQVTAGLNFTGFLTIRGH-V 237
           G V+  G N    CG + TN+ I  P  +        +  KQ+  G + +  +  + + V
Sbjct: 97  GLVYAWGYNYFGQCGDK-TNQTIKVPTSILFPTIDNKIIIKQIACGDSHSLAIAEQPYGV 155

Query: 238 HTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV------QIAAGPSYMLAVTGNGVVY 291
           ++ G N  GQLGHGD L+R  P  ++ +              +A G  + + V+  G +Y
Sbjct: 156 YSWGVNRWGQLGHGDQLNRNQPTLLSNIGSGSGSGNSISFSMVACGSQHSMIVSNYGELY 215

Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 351
           +FG G+   LGHG++  + +P  + +   K I  V V+AG  H   +DS+G +Y+WG   
Sbjct: 216 TFGCGTTGRLGHGDEQPKFKPTPVSSLVGKSI--VSVAAGVMHSSCVDSNGKIYSWGWNR 273

Query: 352 CGALGHGDEIDKTLPEP-------LSSLKS-----HLA----VQVCARKRKTFVLVDTGS 395
            G LG+G    +TLP P       LS ++      HL     ++V   K  T  L  +G 
Sbjct: 274 YGQLGNGSVKSQTLPTPPKFQNPKLSDIQQQQQQHHLMKLNFIKVVCGKNHTLALSSSGE 333

Query: 396 VYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFG 455
           V GFG+   G LG    G     L P  ++     HV  I++G YH++ +TD G  + +G
Sbjct: 334 VVGFGFNACGQLG---NGNHMDQLYPVKIE--FNEHVIDIASGYYHSLCLTDNGEAYSWG 388

Query: 456 DNERAQLG 463
                 LG
Sbjct: 389 YMSDGSLG 396



 Score = 92.4 bits (228), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 80/269 (29%), Positives = 119/269 (44%), Gaps = 25/269 (9%)

Query: 235 GHVHTCGSNTHGQLGH--GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV-VY 291
           G V+  G N  GQ G     T+  PT      ++    + QIA G S+ LA+      VY
Sbjct: 97  GLVYAWGYNYFGQCGDKTNQTIKVPTSILFPTIDNKIIIKQIACGDSHSLAIAEQPYGVY 156

Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVR-----VSAGDEHVVALDSSGYVYT 346
           S+G      LGHG+Q +  QP  +                 V+ G +H + + + G +YT
Sbjct: 157 SWGVNRWGQLGHGDQLNRNQPTLLSNIGSGSGSGNSISFSMVACGSQHSMIVSNYGELYT 216

Query: 347 WGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGS 406
           +G G  G LGHGDE  K  P P+SSL     V V A    +  +   G +Y +GW  +G 
Sbjct: 217 FGCGTTGRLGHGDEQPKFKPTPVSSLVGKSIVSVAAGVMHSSCVDSNGKIYSWGWNRYGQ 276

Query: 407 LGFPDRGVSDKVL-------RPRILD---SLRAHHVSQIS-----TGLYHTVVVTDRGRL 451
           LG  +  V  + L        P++ D     + HH+ +++      G  HT+ ++  G +
Sbjct: 277 LG--NGSVKSQTLPTPPKFQNPKLSDIQQQQQQHHLMKLNFIKVVCGKNHTLALSSSGEV 334

Query: 452 FGFGDNERAQLGHDTLRGCLEPTEIFIQE 480
            GFG N   QLG+      L P +I   E
Sbjct: 335 VGFGFNACGQLGNGNHMDQLYPVKIEFNE 363



 Score = 91.7 bits (226), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 102/410 (24%), Positives = 176/410 (42%), Gaps = 61/410 (14%)

Query: 115 QITTGRYHTLLISNS--SVFSCGSSLCGVLGHGPE------TTQCVSFTRINFPSAAHVV 166
           QI  G  H+L I+     V+S G +  G LGHG +      T      +     ++    
Sbjct: 137 QIACGDSHSLAIAEQPYGVYSWGVNRWGQLGHGDQLNRNQPTLLSNIGSGSGSGNSISFS 196

Query: 167 QVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN 226
            V+    H+  V   G+++T G  ++   GH D  +P F+P  V +L G     V AG+ 
Sbjct: 197 MVACGSQHSMIVSNYGELYTFGCGTTGRLGHGD-EQPKFKPTPVSSLVGKSIVSVAAGVM 255

Query: 227 FTGFLTIRGHVHTCGSNTHGQLGHGDTLDR--PTPKSI--APLEEVG-----------SV 271
            +  +   G +++ G N +GQLG+G    +  PTP       L ++            + 
Sbjct: 256 HSSCVDSNGKIYSWGWNRYGQLGNGSVKSQTLPTPPKFQNPKLSDIQQQQQQHHLMKLNF 315

Query: 272 VQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG 331
           +++  G ++ LA++ +G V  FG  +   LG+G   D+L P  I+ F     HV+ +++G
Sbjct: 316 IKVVCGKNHTLALSSSGEVVGFGFNACGQLGNGNHMDQLYPVKIE-FNE---HVIDIASG 371

Query: 332 DEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 391
             H + L  +G  Y+WG    G+LG G+                  V     K K   LV
Sbjct: 372 YYHSLCLTDNGEAYSWGYMSDGSLGLGE------------------VYTHQTKPKLIPLV 413

Query: 392 DTGSVYGFGWMGFGSL-GFPDRGVSDKVLRPRILDSLRAHH----VSQISTGLYHTVVVT 446
                +      F  + G  D   + + +    L   + +     V  IS G +++ ++T
Sbjct: 414 HIRHCFTDSNDAFNEIYGRQDENTTQETIDQHKLYLSKKYSVGDTVDMISAGAWNSAIIT 473

Query: 447 DRGRL--FGFGDNER----AQLGHDTLRGCLEPTEIFIQ---EMEEDTGL 487
             G+L  FGFGD  R    ++   D +   +EPT+  ++    ++EDT +
Sbjct: 474 SSGKLFCFGFGDTYRNGNQSEFDQD-MPIIVEPTKWGLERPFNIKEDTDI 522


>gi|410906431|ref|XP_003966695.1| PREDICTED: X-linked retinitis pigmentosa GTPase regulator-like
           [Takifugu rubripes]
          Length = 726

 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 90/332 (27%), Positives = 152/332 (45%), Gaps = 26/332 (7%)

Query: 146 PETTQCVSFTRINF----PSAAHV-----VQVSASENHAAFVLQSGQVFTCGDNSSFCCG 196
           PET    +F +  F    PS   +     ++++  + H A + ++G++F  G N+    G
Sbjct: 10  PETGAVFTFGKSKFADNIPSKFWLKNDVPLKIACGDEHTALITKNGRLFMFGSNNWGQLG 69

Query: 197 HRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDR 256
              + R + +P  V+ALK      V  G N T   T +G V + G N+ GQLG GD  +R
Sbjct: 70  -LGSKRTVNKPTCVKALKTEKVLLVACGRNHTLICTAQGKVFSSGGNSEGQLGLGDCEER 128

Query: 257 PTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQ 316
            T + I   + +G V  +AAG +   A+T +G ++ +G  +   +G  ++     P+ + 
Sbjct: 129 TTFQRIHAFDSLGPVKMLAAGSNTSAALTESGKLFMWGDNTEGQIGLAKESHAPSPQEVD 188

Query: 317 TFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE--IDKTLPEPLSSLKS 374
                G  +  VS G  H   + + G +YT+G+   G LG   E      +P+ + S+K 
Sbjct: 189 V----GGPISWVSCGYYHSAFVTADGALYTFGECDSGKLGLTTEQLPRHRVPQMVKSIKE 244

Query: 375 HLAVQVCARKRKTFVLVDTGSVYG---FGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHH 431
            +    C       +  +    +G   FG +G G+  F  R        PR ++  +   
Sbjct: 245 PVTQVACGGGHTVALTEERLFTFGLGQFGQLGHGTFIFESR-------LPRPVEHFKKGR 297

Query: 432 VSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 463
           V Q++ G  HT V+TD G L+ FGD    +LG
Sbjct: 298 VCQVACGENHTAVITDGGLLYTFGDGRHGKLG 329



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 97/342 (28%), Positives = 153/342 (44%), Gaps = 25/342 (7%)

Query: 114 MQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETT----QCVSFTRINFPSAAHVVQV 168
           ++I  G  HT LI+ N  +F  GS+  G LG G + T     CV   +        V+ V
Sbjct: 39  LKIACGDEHTALITKNGRLFMFGSNNWGQLGLGSKRTVNKPTCVKALKTE-----KVLLV 93

Query: 169 SASENHAAFVLQSGQVFTCGDNSSFCCGHRD-TNRPIFRPRLVEALKGV-PCKQVTAGLN 226
           +   NH       G+VF+ G NS    G  D   R  F+   + A   + P K + AG N
Sbjct: 94  ACGRNHTLICTAQGKVFSSGGNSEGQLGLGDCEERTTFQ--RIHAFDSLGPVKMLAAGSN 151

Query: 227 FTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTG 286
            +  LT  G +   G NT GQ+G       P+P+ +   +  G +  ++ G  +   VT 
Sbjct: 152 TSAALTESGKLFMWGDNTEGQIGLAKESHAPSPQEV---DVGGPISWVSCGYYHSAFVTA 208

Query: 287 NGVVYSFGSGSNFCLGHGEQHDELQ--PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           +G +Y+FG   +  LG   +       P+ +++ +     V +V+ G  H VAL +   +
Sbjct: 209 DGALYTFGECDSGKLGLTTEQLPRHRVPQMVKSIKEP---VTQVACGGGHTVAL-TEERL 264

Query: 345 YTWGKGYCGALGHGDEI-DKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 403
           +T+G G  G LGHG  I +  LP P+   K     QV   +  T V+ D G +Y FG   
Sbjct: 265 FTFGLGQFGQLGHGTFIFESRLPRPVEHFKKGRVCQVACGENHTAVITDGGLLYTFGDGR 324

Query: 404 FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVV 445
            G LG  +   +++  +P +      + V   + G  H VV+
Sbjct: 325 HGKLGLGEENFTNQ-FKPTVCSRFLKYGVQAATCGGCHMVVL 365



 Score = 85.5 bits (210), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 79/257 (30%), Positives = 121/257 (47%), Gaps = 18/257 (7%)

Query: 216 VPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGD--TLDRPTPKSIAPLEEVGSVVQ 273
           VP K +  G   T  +T  G +   GSN  GQLG G   T+++PT       E+V   + 
Sbjct: 37  VPLK-IACGDEHTALITKNGRLFMFGSNNWGQLGLGSKRTVNKPTCVKALKTEKV---LL 92

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 333
           +A G ++ L  T  G V+S G  S   LG G+  +    + I  F   G  V  ++AG  
Sbjct: 93  VACGRNHTLICTAQGKVFSSGGNSEGQLGLGDCEERTTFQRIHAFDSLGP-VKMLAAGSN 151

Query: 334 HVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDT 393
              AL  SG ++ WG    G +G   E     P+ +  +   ++   C      FV  D 
Sbjct: 152 TSAALTESGKLFMWGDNTEGQIGLAKESHAPSPQEVD-VGGPISWVSCGYYHSAFVTAD- 209

Query: 394 GSVYGFGWMGFGSLGFPDRGVSDKVLR---PRILDSLRAHHVSQISTGLYHTVVVTDRGR 450
           G++Y FG    G LG      ++++ R   P+++ S++   V+Q++ G  HTV +T+  R
Sbjct: 210 GALYTFGECDSGKLGL----TTEQLPRHRVPQMVKSIK-EPVTQVACGGGHTVALTEE-R 263

Query: 451 LFGFGDNERAQLGHDTL 467
           LF FG  +  QLGH T 
Sbjct: 264 LFTFGLGQFGQLGHGTF 280


>gi|417411454|gb|JAA52162.1| Putative alpha-tubulin suppressor, partial [Desmodus rotundus]
          Length = 534

 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 79/255 (30%), Positives = 123/255 (48%), Gaps = 11/255 (4%)

Query: 230 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGSVVQIAAGPSYMLAVTGN 287
           ++T    V   G N    LG GD      PK +  L  +++ S+    +GP  +L+ T +
Sbjct: 43  YVTDNDEVFVFGLNYSNCLGTGDNQSTLIPKKLEALCGKKIKSL-SYGSGPHVLLS-TED 100

Query: 288 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGI-HVVRVSAGDEHVVALDSSGYVYT 346
           GVVY++G      LG+G  +  + P  IQ      I  VV V+ G  H VAL + G V+ 
Sbjct: 101 GVVYAWGHNGYSQLGNGTTNQGIAP--IQVCTNLLIKQVVEVACGSHHSVALAADGEVFA 158

Query: 347 WGKGYCGALGHGDEIDKTLPEPLSS-LKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFG 405
           WG   CG +G G   ++  P  +++ L     V +   +  +  ++D G VYG+G+ G G
Sbjct: 159 WGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNG 218

Query: 406 SLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHD 465
            LG    G +   L P  + +L +  V+QI  G  HT+ +TD G L+ +G N   QLG  
Sbjct: 219 QLGL---GNNVNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTG 275

Query: 466 TLRGCLEPTEIFIQE 480
                L P  I +++
Sbjct: 276 NKNNLLSPAHIMVEK 290



 Score = 93.2 bits (230), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 73/255 (28%), Positives = 120/255 (47%), Gaps = 12/255 (4%)

Query: 171 SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
           S N A +V  + +VF  G N S C G  D N+    P+ +EAL G   K ++ G      
Sbjct: 37  SANEALYVTDNDEVFVFGLNYSNCLGTGD-NQSTLIPKKLEALCGKKIKSLSYGSGPHVL 95

Query: 231 LTIR-GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 289
           L+   G V+  G N + QLG+G T     P  +     +  VV++A G  + +A+  +G 
Sbjct: 96  LSTEDGVVYAWGHNGYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGSHHSVALAADGE 155

Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRV---SAGDEHVVALDSSGYVYT 346
           V+++G  +   +G G   ++  PR +       +H+ RV   + G    +A+  +G VY 
Sbjct: 156 VFAWGYNNCGQVGSGSTANQPTPRKVTNC----LHIKRVVGIACGQTSSMAVLDNGEVYG 211

Query: 347 WGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGS 406
           WG    G LG G+ +++  P  +++L S    Q+      T  L D G +Y +G   +G 
Sbjct: 212 WGYNGNGQLGLGNNVNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQ 271

Query: 407 LGFPDRGVSDKVLRP 421
           LG    G  + +L P
Sbjct: 272 LG---TGNKNNLLSP 283



 Score = 82.8 bits (203), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 63/228 (27%), Positives = 97/228 (42%), Gaps = 3/228 (1%)

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
           H     + G V+  G N     G+  TN+ I   ++   L      +V  G + +  L  
Sbjct: 93  HVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGSHHSVALAA 152

Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
            G V   G N  GQ+G G T ++PTP+ +     +  VV IA G +  +AV  NG VY +
Sbjct: 153 DGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGW 212

Query: 294 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 353
           G   N  LG G   ++L P  +       + V ++  G  H +AL   G +Y WG    G
Sbjct: 213 GYNGNGQLGLGNNVNQLTPVRVAALH--SVCVNQIVCGYAHTLALTDEGLLYAWGANTYG 270

Query: 354 ALGHGDEIDKTLPEPLSSLKSHLA-VQVCARKRKTFVLVDTGSVYGFG 400
            LG G++ +   P  +   K  +  +  C     +      G VY +G
Sbjct: 271 QLGTGNKNNLLSPAHIMVEKERVVEIAACHSAHTSAAKTQGGHVYMWG 318



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 56/184 (30%), Positives = 86/184 (46%), Gaps = 6/184 (3%)

Query: 114 MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +++  G +H++ L ++  VF+ G + CG +G G    Q       N      VV ++  +
Sbjct: 138 VEVACGSHHSVALAADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQ 197

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
             +  VL +G+V+  G N +   G    N     P  V AL  V   Q+  G   T  LT
Sbjct: 198 TSSMAVLDNGEVYGWGYNGNGQLG-LGNNVNQLTPVRVAALHSVCVNQIVCGYAHTLALT 256

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY--MLAVTGNGVV 290
             G ++  G+NT+GQLG G+  +  +P  I  + E   VV+IAA  S     A T  G V
Sbjct: 257 DEGLLYAWGANTYGQLGTGNKNNLLSPAHI--MVEKERVVEIAACHSAHTSAAKTQGGHV 314

Query: 291 YSFG 294
           Y +G
Sbjct: 315 YMWG 318


>gi|403303292|ref|XP_003942270.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 1
           [Saimiri boliviensis boliviensis]
          Length = 551

 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 80/275 (29%), Positives = 122/275 (44%), Gaps = 5/275 (1%)

Query: 128 NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS-ASENHAAFVLQSGQVFT 186
           N  +F  G++ CG LG G +    +   R++  S   +  +S  S  H       G+VFT
Sbjct: 64  NDEIFVLGTNCCGCLGLG-DVQSTIEPRRLDSLSGKKIACLSYGSGPHIVLATTEGEVFT 122

Query: 187 CGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHG 246
            G N+    G+  TN  +    +   L      +V  G   +  LT  G V   G N  G
Sbjct: 123 WGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSG 182

Query: 247 QLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ 306
           Q+G G T+++P P+ +    +   VV IA G    +AV  +G VY +G   N  LG G  
Sbjct: 183 QVGSGSTINQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDSGEVYVWGYNGNGQLGLGNS 242

Query: 307 HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP 366
            +  QP   +    +GI V RV+ G  H + L   G VY WG    G LG G++ +++ P
Sbjct: 243 GN--QPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYP 300

Query: 367 EPLSSLKSH-LAVQVCARKRKTFVLVDTGSVYGFG 400
            P++  K   + +  C     +      G VY +G
Sbjct: 301 TPVTVEKDRIIEIAACHSTHTSAAKTQGGHVYMWG 335



 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 80/282 (28%), Positives = 134/282 (47%), Gaps = 10/282 (3%)

Query: 203 PIFRPRLVEALKGV--PCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPK 260
           PIF     E L+ +   C   +AG N   + T+   +   G+N  G LG GD      P+
Sbjct: 32  PIFSLCSEEELQLIRQACVFGSAG-NEVLYTTVNDEIFVLGTNCCGCLGLGDVQSTIEPR 90

Query: 261 SIAPLE-EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFR 319
            +  L  +  + +   +GP  +LA T  G V+++G  +   LG+G  +  L P  I T  
Sbjct: 91  RLDSLSGKKIACLSYGSGPHIVLATT-EGEVFTWGHNAYSQLGNGTTNHGLVPCHIST-N 148

Query: 320 RKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLS-SLKSHLAV 378
                V+ V+ G  H + L S G V+ WG    G +G G  I++ +P  ++  L++ + V
Sbjct: 149 LSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTINQPIPRRVTGCLQNKVVV 208

Query: 379 QVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTG 438
            +   +     +VD+G VY +G+ G G LG  + G      R   L  +R   V +++ G
Sbjct: 209 TIACGQMCCMAVVDSGEVYVWGYNGNGQLGLGNSGNQPTPCRVAALQGIR---VQRVACG 265

Query: 439 LYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQE 480
             HT+V+TD G+++ +G N   QLG         PT + +++
Sbjct: 266 YAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPVTVEK 307



 Score = 89.0 bits (219), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 67/238 (28%), Positives = 111/238 (46%), Gaps = 5/238 (2%)

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG--VPCKQVTAGLNFTGF 230
           N   +   + ++F  G N   C G  D    I  PR +++L G  + C    +G +    
Sbjct: 56  NEVLYTTVNDEIFVLGTNCCGCLGLGDVQSTI-EPRRLDSLSGKKIACLSYGSGPHIV-L 113

Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 290
            T  G V T G N + QLG+G T     P  I+       V+++A G  + L +T +G V
Sbjct: 114 ATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEV 173

Query: 291 YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKG 350
           +++G  ++  +G G   ++  PR +    +  + VV ++ G    +A+  SG VY WG  
Sbjct: 174 FAWGYNNSGQVGSGSTINQPIPRRVTGCLQNKV-VVTIACGQMCCMAVVDSGEVYVWGYN 232

Query: 351 YCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLG 408
             G LG G+  ++  P  +++L+     +V      T VL D G VY +G   +G LG
Sbjct: 233 GNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLG 290


>gi|402902028|ref|XP_003913931.1| PREDICTED: RCC1 and BTB domain-containing protein 1 isoform 2
           [Papio anubis]
          Length = 355

 Score =  106 bits (265), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 78/255 (30%), Positives = 123/255 (48%), Gaps = 11/255 (4%)

Query: 230 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGSVVQIAAGPSYMLAVTGN 287
           ++T    V   G N    LG GD      PK +  L  +++ S+    +GP  +L+ T +
Sbjct: 36  YVTDDDEVFVFGLNYSNCLGTGDNQSTLVPKKLEGLSGKKIKSL-SYGSGPHVLLS-TED 93

Query: 288 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGI-HVVRVSAGDEHVVALDSSGYVYT 346
           GVVY++G      LG+G  +  + P  IQ      I  VV V+ G  H +AL + G V+ 
Sbjct: 94  GVVYAWGHNGYSQLGNGTTNQGIAP--IQVCTNLLIKQVVEVACGSHHSMALAADGEVFA 151

Query: 347 WGKGYCGALGHGDEIDKTLPEPLSS-LKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFG 405
           WG   CG +G G   ++  P  +++ L     V +   +  +  ++D G VYG+G+ G G
Sbjct: 152 WGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNG 211

Query: 406 SLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHD 465
            LG  + G     L P  + +L +  V+QI  G  HT+ +TD G L+ +G N   QLG  
Sbjct: 212 QLGLGNNG---NQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTG 268

Query: 466 TLRGCLEPTEIFIQE 480
                L P  I +++
Sbjct: 269 NKNNLLSPAHIMVEK 283



 Score = 88.6 bits (218), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 76/263 (28%), Positives = 121/263 (46%), Gaps = 14/263 (5%)

Query: 163 AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 222
           A V   SASE  A +V    +VF  G N S C G  D N+    P+ +E L G   K ++
Sbjct: 24  ACVFGTSASE--ALYVTDDDEVFVFGLNYSNCLGTGD-NQSTLVPKKLEGLSGKKIKSLS 80

Query: 223 AGLNFTGFLTIR-GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 281
            G      L+   G V+  G N + QLG+G T     P  +     +  VV++A G  + 
Sbjct: 81  YGSGPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGSHHS 140

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQT---FRRKGIHVVRVSAGDEHVVAL 338
           +A+  +G V+++G  +   +G G   ++  PR +      +R    VV ++ G    +A+
Sbjct: 141 MALAADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKR----VVGIACGQTSSMAV 196

Query: 339 DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYG 398
             +G VY WG    G LG G+  ++  P  +++L S    Q+      T  L D G +Y 
Sbjct: 197 LDNGEVYGWGYNGNGQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYA 256

Query: 399 FGWMGFGSLGFPDRGVSDKVLRP 421
           +G   +G LG    G  + +L P
Sbjct: 257 WGANTYGQLG---TGNKNNLLSP 276



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 63/228 (27%), Positives = 97/228 (42%), Gaps = 3/228 (1%)

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
           H     + G V+  G N     G+  TN+ I   ++   L      +V  G + +  L  
Sbjct: 86  HVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGSHHSMALAA 145

Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
            G V   G N  GQ+G G T ++PTP+ +     +  VV IA G +  +AV  NG VY +
Sbjct: 146 DGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGW 205

Query: 294 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 353
           G   N  LG G   ++L P  +       + V ++  G  H +AL   G +Y WG    G
Sbjct: 206 GYNGNGQLGLGNNGNQLTPVRVAALHS--VCVNQIVCGYAHTLALTDEGLLYAWGANTYG 263

Query: 354 ALGHGDEIDKTLPEPLSSLKSHLA-VQVCARKRKTFVLVDTGSVYGFG 400
            LG G++ +   P  +   K  +  +  C     +      G VY +G
Sbjct: 264 QLGTGNKNNLLSPAHIMVEKERVVEIAACHSAHTSAAKTQGGHVYMWG 311



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 56/184 (30%), Positives = 86/184 (46%), Gaps = 6/184 (3%)

Query: 114 MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +++  G +H++ L ++  VF+ G + CG +G G    Q       N      VV ++  +
Sbjct: 131 VEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQ 190

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
             +  VL +G+V+  G N +   G    N     P  V AL  V   Q+  G   T  LT
Sbjct: 191 TSSMAVLDNGEVYGWGYNGNGQLG-LGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALT 249

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY--MLAVTGNGVV 290
             G ++  G+NT+GQLG G+  +  +P  I   +E   VV+IAA  S     A T  G V
Sbjct: 250 DEGLLYAWGANTYGQLGTGNKNNLLSPAHIMVEKE--RVVEIAACHSAHTSAAKTQGGHV 307

Query: 291 YSFG 294
           Y +G
Sbjct: 308 YMWG 311


>gi|421871589|ref|ZP_16303210.1| regulator of chromosome condensation family protein [Brevibacillus
           laterosporus GI-9]
 gi|372459473|emb|CCF12759.1| regulator of chromosome condensation family protein [Brevibacillus
           laterosporus GI-9]
          Length = 392

 Score =  106 bits (265), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 94/349 (26%), Positives = 156/349 (44%), Gaps = 15/349 (4%)

Query: 129 SSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCG 188
           S ++  GS   G  G G  + +  + + +     + V+ V    +H   + + G V+T G
Sbjct: 51  SVIYGTGSDANG--GLGSSSVKGKTTSPVPVDDLSDVLMVDTGTSHTVALQKDGTVWTWG 108

Query: 189 DNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQL 248
            ++    G+         P  V+ L  V  KQV AG NFT  L   G V   G N  GQL
Sbjct: 109 WSAYGELGNEKAKSTEKTPHHVKWLSDV--KQVRAGENFTLALKEDGTVWAFGKNRSGQL 166

Query: 249 GHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHD 308
           G G T  R  P  ++ L +   +V I AG  + LA++ +G V+++G+ S   LG+G +  
Sbjct: 167 GDGTTETRVKPVQVSGLTD---IVAIDAGEEFSLALSEDGTVWAWGNNSVGQLGNGTREK 223

Query: 309 ELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEP 368
            LQP  +         V+ +S G++   A+ S+G VY WG    G LG G +     P  
Sbjct: 224 ALQPVQVSEL----TDVIAISTGEKQGYAVTSNGDVYGWGYN-QGKLGDGTKKSSNSPVL 278

Query: 369 LSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLR 428
           +  +   +AV   + K+ T  L + G+V+ +G    G LG+              L+S  
Sbjct: 279 IDGIYDVIAVD--SGKQHTLALKEDGTVWAWGTNTHGQLGYGTPVNYSMTPNQVFLESTE 336

Query: 429 A-HHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 476
             + +  I  G +H+  +   G ++ +G N   +LG    +  + P +I
Sbjct: 337 PLNQIVAIDAGGFHSHAIKKDGTVWSWGFNSNGELGLGHSKKQMYPAKI 385



 Score = 69.3 bits (168), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 60/219 (27%), Positives = 96/219 (43%), Gaps = 16/219 (7%)

Query: 104 SDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAA 163
           +DIV   AG        +   L  + +V++ G++  G LG+G   T+  +   +      
Sbjct: 184 TDIVAIDAGE------EFSLALSEDGTVWAWGNNSVGQLGNG---TREKALQPVQVSELT 234

Query: 164 HVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTA 223
            V+ +S  E     V  +G V+  G N         T +    P L++ +  V    V +
Sbjct: 235 DVIAISTGEKQGYAVTSNGDVYGWGYNQGKLG--DGTKKSSNSPVLIDGIYDVIA--VDS 290

Query: 224 GLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRP-TPKSI--APLEEVGSVVQIAAGPSY 280
           G   T  L   G V   G+NTHGQLG+G  ++   TP  +     E +  +V I AG  +
Sbjct: 291 GKQHTLALKEDGTVWAWGTNTHGQLGYGTPVNYSMTPNQVFLESTEPLNQIVAIDAGGFH 350

Query: 281 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFR 319
             A+  +G V+S+G  SN  LG G    ++ P  I+T  
Sbjct: 351 SHAIKKDGTVWSWGFNSNGELGLGHSKKQMYPAKIETIN 389


>gi|444731984|gb|ELW72311.1| RCC1 and BTB domain-containing protein 1 [Tupaia chinensis]
          Length = 531

 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 78/255 (30%), Positives = 123/255 (48%), Gaps = 11/255 (4%)

Query: 230 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGSVVQIAAGPSYMLAVTGN 287
           ++T    V   G N    LG GD      PK +  L  +++ S+    +GP  +L+ T +
Sbjct: 36  YVTDSDEVFVFGLNYSNCLGTGDNQSTLVPKKLEALCGKKIKSL-SYGSGPHVLLS-TED 93

Query: 288 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGI-HVVRVSAGDEHVVALDSSGYVYT 346
           GVVY++G      LG+G  +  + P  IQ      I  VV V+ G  H +AL + G V+ 
Sbjct: 94  GVVYAWGHNGYSQLGNGTTNQGIAP--IQVCTNLLIKQVVEVACGSHHSMALAADGEVFA 151

Query: 347 WGKGYCGALGHGDEIDKTLPEPLSS-LKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFG 405
           WG   CG +G G   ++  P  +++ L     V +   +  +  ++D G VYG+G+ G G
Sbjct: 152 WGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNG 211

Query: 406 SLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHD 465
            LG  + G     L P  + +L +  V+QI  G  HT+ +TD G L+ +G N   QLG  
Sbjct: 212 QLGLGNNG---NQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTG 268

Query: 466 TLRGCLEPTEIFIQE 480
                L P  I +++
Sbjct: 269 NKNNLLSPAHIMVEK 283



 Score = 82.8 bits (203), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 63/228 (27%), Positives = 97/228 (42%), Gaps = 3/228 (1%)

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
           H     + G V+  G N     G+  TN+ I   ++   L      +V  G + +  L  
Sbjct: 86  HVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGSHHSMALAA 145

Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
            G V   G N  GQ+G G T ++PTP+ +     +  VV IA G +  +AV  NG VY +
Sbjct: 146 DGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGW 205

Query: 294 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 353
           G   N  LG G   ++L P  +       + V ++  G  H +AL   G +Y WG    G
Sbjct: 206 GYNGNGQLGLGNNGNQLTPVRVAALH--SVCVNQIVCGYAHTLALTDEGLLYAWGANTYG 263

Query: 354 ALGHGDEIDKTLPEPLSSLKSHLA-VQVCARKRKTFVLVDTGSVYGFG 400
            LG G++ +   P  +   K  +  +  C     +      G VY +G
Sbjct: 264 QLGTGNKNNLLSPAHIMVEKERVVEIAACHSAHTSAAKTQGGHVYMWG 311


>gi|440796662|gb|ELR17771.1| protein kinase domain containing protein [Acanthamoeba castellanii
           str. Neff]
          Length = 972

 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 77/231 (33%), Positives = 114/231 (49%), Gaps = 10/231 (4%)

Query: 220 QVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG-SVVQIAAGP 278
           Q+  G   +  LT  GHV+T G   +GQLGHG   D   PK +  L     ++  I  G 
Sbjct: 139 QIGVGDQHSVLLTDGGHVYTFGQGIYGQLGHGTRKDLDRPKRVEALVRAQQTITSIGVGF 198

Query: 279 SYMLAVTGNGVVYSFGSGSNFCLGHGEQHDEL-QPRAIQTFRRKGIHVVRVSAGDEHVVA 337
               A+  +GVV+S+G    + LGH  Q D + QP+ +   + K   +++V+AG +H + 
Sbjct: 199 DQTFAINADGVVHSWGRQGPW-LGHAAQPDHVKQPQEVGLLKNKA-KIMQVAAGKQHTLL 256

Query: 338 LDSSGYVYTWGKGYCGALGHGDEIDKTL--PEPLSSLKSHLAVQVCARKRKTFVLVDTGS 395
           L   G VY+ GK   G LG G  + K    P P++SL +++  QV A ++ + VL   GS
Sbjct: 257 LTIDGKVYSMGKNKDGCLGQGKTVKKETANPMPITSLNNYVITQVAAGEKHSVVLASDGS 316

Query: 396 VYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT 446
           V  FG    G LG  D    D    PR +  +       I+ G  HT+V+T
Sbjct: 317 VLTFGSGSNGRLGHGDTKNQD---VPRTVQGV-FDKACAIAAGFEHTIVLT 363



 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 71/232 (30%), Positives = 112/232 (48%), Gaps = 7/232 (3%)

Query: 235 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 294
           G  ++ G    G+LGHG   +   PK    LE  G V QI  G  + + +T  G VY+FG
Sbjct: 104 GTAYSFGQGEWGKLGHGGAANEQHPKQ---LEVQGKVTQIGVGDQHSVLLTDGGHVYTFG 160

Query: 295 SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGA 354
            G    LGHG + D  +P+ ++   R    +  +  G +   A+++ G V++WG+     
Sbjct: 161 QGIYGQLGHGTRKDLDRPKRVEALVRAQQTITSIGVGFDQTFAINADGVVHSWGR-QGPW 219

Query: 355 LGHGDEIDKT-LPEPLSSLKSHLAV-QVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDR 412
           LGH  + D    P+ +  LK+   + QV A K+ T +L   G VY  G    G LG   +
Sbjct: 220 LGHAAQPDHVKQPQEVGLLKNKAKIMQVAAGKQHTLLLTIDGKVYSMGKNKDGCLG-QGK 278

Query: 413 GVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 464
            V  +   P  + SL  + ++Q++ G  H+VV+   G +  FG     +LGH
Sbjct: 279 TVKKETANPMPITSLNNYVITQVAAGEKHSVVLASDGSVLTFGSGSNGRLGH 330



 Score = 95.1 bits (235), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 74/249 (29%), Positives = 112/249 (44%), Gaps = 12/249 (4%)

Query: 123 TLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSG 182
           T  + + + +S G    G LGHG    +              V Q+   + H+  +   G
Sbjct: 98  TTAVEDGTAYSFGQGEWGKLGHGGAANEQHP---KQLEVQGKVTQIGVGDQHSVLLTDGG 154

Query: 183 QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR--GHVHTC 240
            V+T G       GH  T + + RP+ VEAL        + G+ F     I   G VH+ 
Sbjct: 155 HVYTFGQGIYGQLGH-GTRKDLDRPKRVEALVRAQQTITSIGVGFDQTFAINADGVVHSW 213

Query: 241 GSNTHGQLGHGDTLDR-PTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNF 299
           G      LGH    D    P+ +  L+    ++Q+AAG  + L +T +G VYS G   + 
Sbjct: 214 GRQGP-WLGHAAQPDHVKQPQEVGLLKNKAKIMQVAAGKQHTLLLTIDGKVYSMGKNKDG 272

Query: 300 CLGHGE--QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 357
           CLG G+  + +   P  I +     I   +V+AG++H V L S G V T+G G  G LGH
Sbjct: 273 CLGQGKTVKKETANPMPITSLNNYVI--TQVAAGEKHSVVLASDGSVLTFGSGSNGRLGH 330

Query: 358 GDEIDKTLP 366
           GD  ++ +P
Sbjct: 331 GDTKNQDVP 339



 Score = 82.0 bits (201), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 73/264 (27%), Positives = 112/264 (42%), Gaps = 26/264 (9%)

Query: 88  GNWKRVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGP 146
           G W ++     + E     +E      QI  G  H++L+++   V++ G  + G LGHG 
Sbjct: 112 GEWGKLGHGGAANEQHPKQLEVQGKVTQIGVGDQHSVLLTDGGHVYTFGQGIYGQLGHG- 170

Query: 147 ETTQCVSFTRINFPSAAHVVQVSASEN---------HAAFVLQSGQVFTCGDNSSFCCGH 197
                   TR +      V  +  ++             F + +  V           GH
Sbjct: 171 --------TRKDLDRPKRVEALVRAQQTITSIGVGFDQTFAINADGVVHSWGRQGPWLGH 222

Query: 198 RDTNRPIFRPRLVEALKG-VPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDR 256
                 + +P+ V  LK      QV AG   T  LTI G V++ G N  G LG G T+ +
Sbjct: 223 AAQPDHVKQPQEVGLLKNKAKIMQVAAGKQHTLLLTIDGKVYSMGKNKDGCLGQGKTVKK 282

Query: 257 PT--PKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRA 314
            T  P  I  L     + Q+AAG  + + +  +G V +FGSGSN  LGHG+  ++  PR 
Sbjct: 283 ETANPMPITSLNNY-VITQVAAGEKHSVVLASDGSVLTFGSGSNGRLGHGDTKNQDVPRT 341

Query: 315 IQTFRRKGIHVVRVSAGDEHVVAL 338
           +Q    K      ++AG EH + L
Sbjct: 342 VQGVFDK---ACAIAAGFEHTIVL 362



 Score = 56.6 bits (135), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 54/190 (28%), Positives = 85/190 (44%), Gaps = 18/190 (9%)

Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 349
           V SFG   N  LG+ E +D   PR++         ++ + AG    VA++S G  Y WG 
Sbjct: 7   VVSFGLNFNGQLGY-ECYDNKNPRSVNAPS----DLISLHAGWNCSVAVNSEGTPYFWGT 61

Query: 350 GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKR---KTFVLVDTGSVYGFGWMGFGS 406
                 G    ++   P PL ++   +  ++  R+     T   V+ G+ Y FG   +G 
Sbjct: 62  MPSKYDGKAKFLE---PSPLPAIS--IGFKLAHRRMLMAPTTTAVEDGTAYSFGQGEWGK 116

Query: 407 LGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDT 466
           LG    G +     P+ L+      V+QI  G  H+V++TD G ++ FG     QLGH T
Sbjct: 117 LG---HGGAANEQHPKQLEV--QGKVTQIGVGDQHSVLLTDGGHVYTFGQGIYGQLGHGT 171

Query: 467 LRGCLEPTEI 476
            +    P  +
Sbjct: 172 RKDLDRPKRV 181


>gi|348573398|ref|XP_003472478.1| PREDICTED: serine/threonine-protein kinase Nek9-like [Cavia
           porcellus]
          Length = 992

 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 82/275 (29%), Positives = 126/275 (45%), Gaps = 21/275 (7%)

Query: 207 PRLVEALK-GVPCKQVTAGLNFTGFLTIRGHVHTC-----GSNTHGQLGHGDTLDRPTPK 260
           P+ ++ +K G   +QV AG      +T+   ++T      G+  HGQLGHGD      PK
Sbjct: 359 PQKLDVIKSGCSARQVCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDKASYRQPK 418

Query: 261 SIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGE--QHDELQPRAIQTF 318
            +  L+   ++ Q++ G  + + VT  G +Y+FGS    C+G  +    + L+P  +  F
Sbjct: 419 HVEKLQG-KAIRQVSCGDDFTVCVTDEGQLYAFGSDYYGCIGVDKIAGPEVLEPMQLNFF 477

Query: 319 RRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAV 378
               +   +VS GD HVV L  +  VY+WG G  G LG   E D   P+ +   K+ + V
Sbjct: 478 LSNPVE--QVSCGDNHVVVLTRNKEVYSWGCGEYGRLGLDSEEDYYTPQRVDVPKALIIV 535

Query: 379 QVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD--RGVSDKVLRPRI--------LDSLR 428
            V      TF+L  +G V   G   F  LG      G+ +      +           L 
Sbjct: 536 AVQCGSDGTFLLTQSGKVLACGLNEFNKLGLNQCMSGIINHEAYHEVPYTTSFTLAKQLS 595

Query: 429 AHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 463
            + +  I+ G  HT  + +RGRL  FG N+  QLG
Sbjct: 596 FYKIRTIAPGKTHTAAIDERGRLLTFGCNKCGQLG 630



 Score = 70.1 bits (170), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 76/307 (24%), Positives = 128/307 (41%), Gaps = 40/307 (13%)

Query: 115 QITTGRYHTLLISNS-SVFSCGSSLCGVLG----HGPETTQCVSFTRINFPSAAHVVQVS 169
           Q++ G   T+ +++   +++ GS   G +G     GPE  + +   ++NF  +  V QVS
Sbjct: 430 QVSCGDDFTVCVTDEGQLYAFGSDYYGCIGVDKIAGPEVLEPM---QLNFFLSNPVEQVS 486

Query: 170 ASENHAAFVLQSGQVFTCGDNSSFCCGHR-----DTNRPIFRPRLVEALKGVPCKQVTAG 224
             +NH   + ++ +V++ G      CG       D+    + P+ V+  K +    V  G
Sbjct: 487 CGDNHVVVLTRNKEVYSWG------CGEYGRLGLDSEEDYYTPQRVDVPKALIIVAVQCG 540

Query: 225 LNFTGFLTIRGHVHTCGSNTHGQLG----------HGDTLDRPTPKSIAPLEEVG--SVV 272
            + T  LT  G V  CG N   +LG          H    + P   S    +++    + 
Sbjct: 541 SDGTFLLTQSGKVLACGLNEFNKLGLNQCMSGIINHEAYHEVPYTTSFTLAKQLSFYKIR 600

Query: 273 QIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGD 332
            IA G ++  A+   G + +FG      LG G     L    +      G  V+RVS GD
Sbjct: 601 TIAPGKTHTAAIDERGRLLTFGCNKCGQLGVGNYKKRLGINLLGG-PLGGKQVIRVSCGD 659

Query: 333 EHVVALDSSGYVYTWGKGYCGALG-------HGDEIDKTLPEPLSSLKSHLAVQVCARKR 385
           E  +A     +++ WG G  G L        HG +I  + P P+     H+    C R  
Sbjct: 660 EFTIAATDDNHIFAWGNGGNGRLAMTPTERSHGSDICTSWPRPIFGSLHHVPDLSC-RGW 718

Query: 386 KTFVLVD 392
            T ++V+
Sbjct: 719 HTILIVE 725



 Score = 69.3 bits (168), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 82/374 (21%), Positives = 147/374 (39%), Gaps = 26/374 (6%)

Query: 98  QSVEHSSDIVETSAGNMQITTGRYHTLLIS-NSSVFSC-----GSSLCGVLGHGPETTQC 151
           +S     D++++     Q+  G  H  +++    +++      G+ L G LGHG + +  
Sbjct: 356 KSTPQKLDVIKSGCSARQVCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDKASY- 414

Query: 152 VSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRP-IFRPRLV 210
                +       + QVS  ++    V   GQ++  G +   C G      P +  P  +
Sbjct: 415 RQPKHVEKLQGKAIRQVSCGDDFTVCVTDEGQLYAFGSDYYGCIGVDKIAGPEVLEPMQL 474

Query: 211 EALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSI-APLEEVG 269
                 P +QV+ G N    LT    V++ G   +G+LG     D  TP+ +  P   + 
Sbjct: 475 NFFLSNPVEQVSCGDNHVVVLTRNKEVYSWGCGEYGRLGLDSEEDYYTPQRVDVPKALII 534

Query: 270 SVVQIAAGPSYMLAVTGNGVVYSFGS----GSNFCL----GHGEQHDELQPRAIQTFRRK 321
             VQ  +  +++L  +G  +          G N C+     H   H+     +    ++ 
Sbjct: 535 VAVQCGSDGTFLLTQSGKVLACGLNEFNKLGLNQCMSGIINHEAYHEVPYTTSFTLAKQL 594

Query: 322 GIHVVR-VSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLS-SLKSHLAVQ 379
             + +R ++ G  H  A+D  G + T+G   CG LG G+   +     L   L     ++
Sbjct: 595 SFYKIRTIAPGKTHTAAIDERGRLLTFGCNKCGQLGVGNYKKRLGINLLGGPLGGKQVIR 654

Query: 380 VCARKRKTFVLVDTGSVYGFGWMGFGSLGFP----DRGVSDKVLRPR-ILDSLRAHHVSQ 434
           V      T    D   ++ +G  G G L         G       PR I  SL  HHV  
Sbjct: 655 VSCGDEFTIAATDDNHIFAWGNGGNGRLAMTPTERSHGSDICTSWPRPIFGSL--HHVPD 712

Query: 435 ISTGLYHTVVVTDR 448
           +S   +HT+++ ++
Sbjct: 713 LSCRGWHTILIVEK 726



 Score = 68.6 bits (166), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 46/164 (28%), Positives = 73/164 (44%), Gaps = 6/164 (3%)

Query: 320 RKGIHVVRVSAGDEHVVALDSSGYVYTW-----GKGYCGALGHGDEIDKTLPEPLSSLKS 374
           + G    +V AG+ H   +     +YTW     G    G LGHGD+     P+ +  L+ 
Sbjct: 366 KSGCSARQVCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDKASYRQPKHVEKLQG 425

Query: 375 HLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQ 434
               QV      T  + D G +Y FG   +G +G  D+    +VL P  L+   ++ V Q
Sbjct: 426 KAIRQVSCGDDFTVCVTDEGQLYAFGSDYYGCIGV-DKIAGPEVLEPMQLNFFLSNPVEQ 484

Query: 435 ISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFI 478
           +S G  H VV+T    ++ +G  E  +LG D+      P  + +
Sbjct: 485 VSCGDNHVVVLTRNKEVYSWGCGEYGRLGLDSEEDYYTPQRVDV 528



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 96/381 (25%), Positives = 155/381 (40%), Gaps = 47/381 (12%)

Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 179
           R  T+  +  +V +  +S   V G G  T Q +   +    S     QV A   H A V 
Sbjct: 330 RSSTVTEAPIAVVTSRTSEVYVWGGGKSTPQKLDVIK----SGCSARQVCAGNTHFAVVT 385

Query: 180 QSGQVFTC-----GDNSSFCCGHRDTNRPIFR-PRLVEALKGVPCKQVTAGLNFTGFLTI 233
              +++T      G       GH D  +  +R P+ VE L+G   +QV+ G +FT  +T 
Sbjct: 386 VEKELYTWVNMQGGTKLHGQLGHGD--KASYRQPKHVEKLQGKAIRQVSCGDDFTVCVTD 443

Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPT-PKSIAPLE----EVGSVVQIAAGPSYMLAVTGNG 288
            G ++  GS+ +G +G    +D+   P+ + P++        V Q++ G ++++ +T N 
Sbjct: 444 EGQLYAFGSDYYGCIG----VDKIAGPEVLEPMQLNFFLSNPVEQVSCGDNHVVVLTRNK 499

Query: 289 VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 348
            VYS+G G    LG   + D   P+ +     K + +V V  G +    L  SG V   G
Sbjct: 500 EVYSWGCGEYGRLGLDSEEDYYTPQRVDV--PKALIIVAVQCGSDGTFLLTQSGKVLACG 557

Query: 349 KGYCGALGHGD------------EIDKTLPEPLSSLKSHLAVQVCAR-KRKTFVLVDTGS 395
                 LG               E+  T    L+   S   ++  A  K  T  + + G 
Sbjct: 558 LNEFNKLGLNQCMSGIINHEAYHEVPYTTSFTLAKQLSFYKIRTIAPGKTHTAAIDERGR 617

Query: 396 VYGFGWMGFGSLGFPDRGVSDKVLRPRIL-DSLRAHHVSQISTGLYHTVVVTDRGRLFGF 454
           +  FG    G LG    G   K L   +L   L    V ++S G   T+  TD   +F +
Sbjct: 618 LLTFGCNKCGQLGV---GNYKKRLGINLLGGPLGGKQVIRVSCGDEFTIAATDDNHIFAW 674

Query: 455 GDNERAQLGHDTLRGCLEPTE 475
           G+    +L        + PTE
Sbjct: 675 GNGGNGRLA-------MTPTE 688



 Score = 49.7 bits (117), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 43/146 (29%), Positives = 65/146 (44%), Gaps = 17/146 (11%)

Query: 336 VALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHL-AVQVCARKRKTFVLVDTG 394
           V    +  VY WG G            K+ P+ L  +KS   A QVCA      V+    
Sbjct: 341 VVTSRTSEVYVWGGG------------KSTPQKLDVIKSGCSARQVCAGNTHFAVVTVEK 388

Query: 395 SVYGFGWMGFGSLGFPDRGVSDKV--LRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLF 452
            +Y +  M  G+      G  DK    +P+ ++ L+   + Q+S G   TV VTD G+L+
Sbjct: 389 ELYTWVNMQGGTKLHGQLGHGDKASYRQPKHVEKLQGKAIRQVSCGDDFTVCVTDEGQLY 448

Query: 453 GFGDNERAQLGHDTLRG--CLEPTEI 476
            FG +    +G D + G   LEP ++
Sbjct: 449 AFGSDYYGCIGVDKIAGPEVLEPMQL 474


>gi|261404982|ref|YP_003241223.1| S-layer domain-containing protein [Paenibacillus sp. Y412MC10]
 gi|261281445|gb|ACX63416.1| S-layer domain protein [Paenibacillus sp. Y412MC10]
          Length = 1074

 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 105/398 (26%), Positives = 176/398 (44%), Gaps = 30/398 (7%)

Query: 114 MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVS------FTRIN--FPSAAH 164
           + I++  YHTL L+ N +V S GS++ G LG+G + +   +      + ++N      A+
Sbjct: 39  VSISSKGYHTLALLDNGTVLSWGSNMVGQLGNGKQGSNFSTSFAQPVYEKVNGELKVLAN 98

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           +V V AS  ++  +   G V+  G N+S   G R      + P  +      P +Q++AG
Sbjct: 99  IVAVEASLQYSLALSADGTVYGWGLNASNKLG-RPFEGTYYYPTAIPIAGLPPIEQISAG 157

Query: 225 LNFTGFLTIRGHVHTCGSNTHGQLGHGDT-----LDRPTPKSIAPLEEVGSVVQIAAGPS 279
           +     L   G V   G N  G +G+G+      ++RP        E +  + QI AG  
Sbjct: 158 VTHAAALAKDGTVWAWGDNQSGAVGNGNNGPLEYVERPVQVKKNASEFLTGIKQIHAGNW 217

Query: 280 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQP-RAIQTFRRKGIHVVRVSAGDEHVVAL 338
           + +AVT NG +  +G    + LG    +    P  A+   +     + +VS G+++ +AL
Sbjct: 218 FTMAVTENGELLGWGYNGTYQLGDLTTNSRSYPVHALDKNKNPLNGIKKVSTGNDYTLAL 277

Query: 339 DSSGYVYTWGKGYCGALGHGDEIDKTL---PEPLSSLKSHLA----VQVCARKRKTFVLV 391
              G + +WG    G LG  D +  T    P+P+    S  A    V + A       + 
Sbjct: 278 KEDGTLLSWGVNGYGQLGS-DTLQGTYSNYPKPVLDKASGDAFGHVVDISAGIAHVAAIR 336

Query: 392 DTGSVYGFG----WMGFGSLGFPDRGVSDKVLRPRILDSLRAH-HVSQISTGLYHTVVVT 446
           + GSV+ +G    W      G   RG      RP  +  L  +  V Q  TG +HTV++ 
Sbjct: 337 EDGSVWTWGGNTIWGSGDITGQLGRGDDRLEERPGRVTRLPGNAKVLQAETGGHHTVIML 396

Query: 447 DRGRLFGFGDNERAQLGHD-TLRGCLEPTEIFIQEMEE 483
           D G L+  G N   QLG    +   +EP ++ +   ++
Sbjct: 397 DNGTLWSMGSNREKQLGGGYKMDSAIEPNQLSLSHYDK 434



 Score = 85.5 bits (210), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 80/302 (26%), Positives = 134/302 (44%), Gaps = 45/302 (14%)

Query: 194 CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI----RGHVHTCGSNTHGQLG 249
             GH DT +            G+P +     ++  G+ T+     G V + GSN  GQLG
Sbjct: 21  TTGHADTGK-----------AGLPGETNIVSISSKGYHTLALLDNGTVLSWGSNMVGQLG 69

Query: 250 HGD-------TLDRPTPKSI-APLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCL 301
           +G        +  +P  + +   L+ + ++V + A   Y LA++ +G VY +G  ++  L
Sbjct: 70  NGKQGSNFSTSFAQPVYEKVNGELKVLANIVAVEASLQYSLALSADGTVYGWGLNASNKL 129

Query: 302 GHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGD-- 359
           G   +     P AI       I   ++SAG  H  AL   G V+ WG    GA+G+G+  
Sbjct: 130 GRPFEGTYYYPTAIPIAGLPPIE--QISAGVTHAAALAKDGTVWAWGDNQSGAVGNGNNG 187

Query: 360 ---------EIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFP 410
                    ++ K   E L+ +K     Q+ A    T  + + G + G+G+ G   LG  
Sbjct: 188 PLEYVERPVQVKKNASEFLTGIK-----QIHAGNWFTMAVTENGELLGWGYNGTYQLG-- 240

Query: 411 DRGVSDKVLRPRILDSLRA--HHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLR 468
           D   + +      LD  +   + + ++STG  +T+ + + G L  +G N   QLG DTL+
Sbjct: 241 DLTTNSRSYPVHALDKNKNPLNGIKKVSTGNDYTLALKEDGTLLSWGVNGYGQLGSDTLQ 300

Query: 469 GC 470
           G 
Sbjct: 301 GT 302



 Score = 40.0 bits (92), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 57/251 (22%), Positives = 98/251 (39%), Gaps = 25/251 (9%)

Query: 84  NRCNGNWKRVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLG 143
           N  NG  + V R +Q  +++S+ +    G  QI  G + T+ ++ +     G    G   
Sbjct: 183 NGNNGPLEYVERPVQVKKNASEFL---TGIKQIHAGNWFTMAVTENGEL-LGWGYNGTYQ 238

Query: 144 HGPETTQCVSFT----RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCG--- 196
            G  TT   S+       N      + +VS   ++   + + G + + G N     G   
Sbjct: 239 LGDLTTNSRSYPVHALDKNKNPLNGIKKVSTGNDYTLALKEDGTLLSWGVNGYGQLGSDT 298

Query: 197 ----HRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNT-------H 245
               + +  +P+      +A   V    ++AG+     +   G V T G NT        
Sbjct: 299 LQGTYSNYPKPVLDKASGDAFGHV--VDISAGIAHVAAIREDGSVWTWGGNTIWGSGDIT 356

Query: 246 GQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGE 305
           GQLG GD      P  +  L     V+Q   G  + + +  NG ++S GS     LG G 
Sbjct: 357 GQLGRGDDRLEERPGRVTRLPGNAKVLQAETGGHHTVIMLDNGTLWSMGSNREKQLGGGY 416

Query: 306 QHDE-LQPRAI 315
           + D  ++P  +
Sbjct: 417 KMDSAIEPNQL 427


>gi|440230900|ref|YP_007344693.1| RCC1 domain-containing protein, alpha-tubulin suppressor [Serratia
            marcescens FGI94]
 gi|440052605|gb|AGB82508.1| RCC1 domain-containing protein, alpha-tubulin suppressor [Serratia
            marcescens FGI94]
          Length = 1812

 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 108/384 (28%), Positives = 167/384 (43%), Gaps = 25/384 (6%)

Query: 115  QITTGRYHTLLISNSS-VFSCGSSLCGVLGHGP--ETTQCVSFTRINFPSAAHVVQVS-- 169
            ++  G  H+L++ N   ++S G +  G+LG G   + T+ V  T +     + VV +S  
Sbjct: 1432 RMAAGSLHSLILDNKDRIWSWGFNRDGMLGDGTNRDRTRPV-LTDLTPLGGSTVVSISTG 1490

Query: 170  --ASENHAAFVLQSGQVFTCGDNSSFCCGHR---DTNRPIFRPRLVEALKGVPCKQVTAG 224
              AS + A  +   G+++  G N +   G     D NRP+     + +L       V AG
Sbjct: 1491 SGASRSQA--IDDQGRLWAWGYNFAGALGDGTGIDRNRPVLVD--LASLGSSKVTAVAAG 1546

Query: 225  LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSI-APLEEVG--SVVQIAAGPSYM 281
                  L  +  +   G N  GQLG G   +   P  I   LE +   +V  + AG  + 
Sbjct: 1547 RYHNLVLDDQSRLWAWGHNGDGQLGDGTRTNVAYPLPIQVDLEPLAGSTVTGVWAGDFHS 1606

Query: 282  LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 341
            + +   G ++ +G      LG G    + +P  +      G  V+ VSAG+ H VALD  
Sbjct: 1607 IILDDLGRLWVWGKNKYGELGDGTTTYQTRPVLVDLLPLNGRKVMAVSAGEHHTVALDEQ 1666

Query: 342  GYVYTWGKGYCGALGHGDEIDKTLPE--PLSSLKSHLAVQVCARKRKTFVLVDTGSVYGF 399
            G ++ WG    G LG G   D+  P    L+SL  H  V + A    T  L + G ++ +
Sbjct: 1667 GGLWAWGLNDSGRLGDGSTTDRHRPVQVDLTSLDGHKVVAISAGGWNTVALDELGRLWAW 1726

Query: 400  GWMGFGSLGFPDRGVSDKVLRPRILD--SLRAHHVSQISTGLYHTVVVTDRGRLFGFGDN 457
            G    G LG    G +    RP  +D   L    V  +S G ++  VV DRG L+ +G N
Sbjct: 1727 GPNESGLLG---DGTTINQHRPVQVDLTPLNGRKVVAVSAGSFYFFVVDDRGELWAWGSN 1783

Query: 458  ERAQLGHDTLRGCLEPTEIFIQEM 481
               QLG  T    L+P  + +  M
Sbjct: 1784 SYGQLGDGTKTRRLKPVRVDMSAM 1807



 Score = 82.4 bits (202), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 82/318 (25%), Positives = 132/318 (41%), Gaps = 24/318 (7%)

Query: 131  VFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQ 183
            +++ G +  G LG G       P      S        ++ V  V+A   H   +    +
Sbjct: 1505 LWAWGYNFAGALGDGTGIDRNRPVLVDLASL------GSSKVTAVAAGRYHNLVLDDQSR 1558

Query: 184  VFTCGDNSSFCCG---HRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTC 240
            ++  G N     G     +   P+     +E L G     V AG   +  L   G +   
Sbjct: 1559 LWAWGHNGDGQLGDGTRTNVAYPLPIQVDLEPLAGSTVTGVWAGDFHSIILDDLGRLWVW 1618

Query: 241  GSNTHGQLGHGDTL--DRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
            G N +G+LG G T    RP    + PL     V+ ++AG  + +A+   G ++++G   +
Sbjct: 1619 GKNKYGELGDGTTTYQTRPVLVDLLPLNGR-KVMAVSAGEHHTVALDEQGGLWAWGLNDS 1677

Query: 299  FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 358
              LG G   D  +P  +      G  VV +SAG  + VALD  G ++ WG    G LG G
Sbjct: 1678 GRLGDGSTTDRHRPVQVDLTSLDGHKVVAISAGGWNTVALDELGRLWAWGPNESGLLGDG 1737

Query: 359  DEIDKTLP--EPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSD 416
              I++  P    L+ L     V V A     FV+ D G ++ +G   +G LG    G   
Sbjct: 1738 TTINQHRPVQVDLTPLNGRKVVAVSAGSFYFFVVDDRGELWAWGSNSYGQLG---DGTKT 1794

Query: 417  KVLRPRILDSLRAHHVSQ 434
            + L+P  +D    ++ S+
Sbjct: 1795 RRLKPVRVDMSAMNNTSK 1812



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 61/206 (29%), Positives = 93/206 (45%), Gaps = 11/206 (5%)

Query: 269  GSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRV 328
            G   ++AAG  + L +     ++S+G   +  LG G   D  +P         G  VV +
Sbjct: 1428 GDKNRMAAGSLHSLILDNKDRIWSWGFNRDGMLGDGTNRDRTRPVLTDLTPLGGSTVVSI 1487

Query: 329  SAGD--EHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP--EPLSSLKSHLAVQVCARK 384
            S G       A+D  G ++ WG  + GALG G  ID+  P    L+SL S     V A +
Sbjct: 1488 STGSGASRSQAIDDQGRLWAWGYNFAGALGDGTGIDRNRPVLVDLASLGSSKVTAVAAGR 1547

Query: 385  RKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRI----LDSLRAHHVSQISTGLY 440
                VL D   ++ +G  G G LG    G    V  P      L+ L    V+ +  G +
Sbjct: 1548 YHNLVLDDQSRLWAWGHNGDGQLG---DGTRTNVAYPLPIQVDLEPLAGSTVTGVWAGDF 1604

Query: 441  HTVVVTDRGRLFGFGDNERAQLGHDT 466
            H++++ D GRL+ +G N+  +LG  T
Sbjct: 1605 HSIILDDLGRLWVWGKNKYGELGDGT 1630



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 69/263 (26%), Positives = 112/263 (42%), Gaps = 14/263 (5%)

Query: 230  FLTIRGHVHTCGSNTHGQLGHGDTLDRPTP--KSIAPLEEVGSVVQIA--AGPSYMLAVT 285
             L  +  + + G N  G LG G   DR  P    + PL    +VV I+  +G S   A+ 
Sbjct: 1442 ILDNKDRIWSWGFNRDGMLGDGTNRDRTRPVLTDLTPLGG-STVVSISTGSGASRSQAID 1500

Query: 286  GNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVY 345
              G ++++G      LG G   D  +P  +         V  V+AG  H + LD    ++
Sbjct: 1501 DQGRLWAWGYNFAGALGDGTGIDRNRPVLVDLASLGSSKVTAVAAGRYHNLVLDDQSRLW 1560

Query: 346  TWGKGYCGALGHGDEIDKTLPEP----LSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGW 401
             WG    G LG G   +   P P    L  L       V A    + +L D G ++ +G 
Sbjct: 1561 AWGHNGDGQLGDGTRTNVAYPLPIQVDLEPLAGSTVTGVWAGDFHSIILDDLGRLWVWGK 1620

Query: 402  MGFGSLGFPDRGVSDKVLRPRILD--SLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNER 459
              +G LG    G +    RP ++D   L    V  +S G +HTV + ++G L+ +G N+ 
Sbjct: 1621 NKYGELG---DGTTTYQTRPVLVDLLPLNGRKVMAVSAGEHHTVALDEQGGLWAWGLNDS 1677

Query: 460  AQLGHDTLRGCLEPTEIFIQEME 482
             +LG  +      P ++ +  ++
Sbjct: 1678 GRLGDGSTTDRHRPVQVDLTSLD 1700


>gi|383453816|ref|YP_005367805.1| RCC1 repeat-containing protein [Corallococcus coralloides DSM 2259]
 gi|380728295|gb|AFE04297.1| RCC1 repeat-containing protein [Corallococcus coralloides DSM 2259]
          Length = 748

 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 106/380 (27%), Positives = 176/380 (46%), Gaps = 35/380 (9%)

Query: 111 AGNMQITT----GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVV 166
           AG  Q+T+     +Y   L ++ +V++ G +  G LG G  T++ +   R++  S  +VV
Sbjct: 97  AGLTQVTSVAAGDQYSLALDADGAVWAWGDNASGQLGDGTLTSRLLP-QRVSALS--NVV 153

Query: 167 QVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN 226
            +++   H   +   G V+  GDN +   G     R    P  V  L GV    V AG +
Sbjct: 154 SLASGFAHVLALRADGTVWAWGDNRNNQLGDGTLTRSSV-PLQVPGLSGVVA--VVAGGS 210

Query: 227 FTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTG 286
            +  L   G +   G N +GQLG G T+ R TP  +A L+ V   V ++ G  + LA+  
Sbjct: 211 SSLALRADGTLWAWGDNRYGQLGDGTTVRRITPVQVASLDSV---VSVSVGAYHALALRA 267

Query: 287 NGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYT 346
           +G V+++G  +   LG G      QP ++         V  + AG+ H +A+ + G V+ 
Sbjct: 268 DGTVWAWGHNAYGQLGDGTNTQRTQPVSVSL-----TDVRTLVAGNYHSLAVRTDGAVWA 322

Query: 347 WGKGYCGALGHGDEIDKTLPEPLSSLKSHL--AVQVCARKRKTFVLVDTGSVYGFGWMGF 404
           WG      LG G+     LP     L++ +   V + A  R +  L   G+ + +G   F
Sbjct: 323 WGDNRYRQLGTGNLTSSPLP-----LQAGMTGGVTLVAGYRHSVALGADGTAWSWGDNVF 377

Query: 405 GSLGFPDRGVSDKVLRPRILD---SLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQ 461
           G LG       D    PR+     S  A   +  ++G  HTV++   GRL+ +GDN++ Q
Sbjct: 378 GQLG-------DTTFEPRMAPVQVSGLALGRADATSGQLHTVMLGANGRLWAWGDNQQGQ 430

Query: 462 LGHDTLRGCLEPTEIFIQEM 481
           LG+ T +    P  + + ++
Sbjct: 431 LGNGTQQDSSLPLPVNLTDV 450



 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 101/368 (27%), Positives = 167/368 (45%), Gaps = 31/368 (8%)

Query: 112 GNMQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAA-HVVQVS 169
           G + +  G  H++ L ++ + +S G ++ G LG   +TT       +     A      +
Sbjct: 349 GGVTLVAGYRHSVALGADGTAWSWGDNVFGQLG---DTTFEPRMAPVQVSGLALGRADAT 405

Query: 170 ASENHAAFVLQSGQVFTCGDNSSFCCGH---RDTNRPIFRPRLVEALKGVPCKQVTAGLN 226
           + + H   +  +G+++  GDN     G+   +D++ P+    L + +       V +G  
Sbjct: 406 SGQLHTVMLGANGRLWAWGDNQQGQLGNGTQQDSSLPL-PVNLTDVIS------VASGYR 458

Query: 227 FTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTG 286
            T  L   G V T G N  GQLG G   DRPTP  +  L   G V  IA G ++ LA+  
Sbjct: 459 HTAALRSDGTVWTWGMNRFGQLGEGTVTDRPTPVQVVGL---GGVTAIATGDNHSLALRS 515

Query: 287 NGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGI-HVVRVSAGDEHVVALDSSGYVY 345
           NG V+++G      LG G   D  QP      +  G+ ++V ++AG  H +AL S G V+
Sbjct: 516 NGTVWAWGFNRYGQLGDGTAVDRRQP-----VQASGLSNIVAIAAGGSHSLALRSDGTVW 570

Query: 346 TWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFG 405
            +G  + G LG+G      +P     L S   V + A    +  L   G+V+ +G+   G
Sbjct: 571 AFGYNFDGQLGNGTRTWTLVPVQAVGLSS--VVSLAAGSLYSLALRADGTVWAWGYNASG 628

Query: 406 SLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHD 465
            LG    G +    +P  +  L    ++ I+ G YH++ +   G ++ +G N   QLG+ 
Sbjct: 629 QLGV---GTTQGSAQPLQVPGLSG--ITSIAAGSYHSLALRSDGWVWAWGFNFEGQLGNG 683

Query: 466 TLRGCLEP 473
           T    L P
Sbjct: 684 TSTPRLSP 691



 Score = 98.2 bits (243), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 96/365 (26%), Positives = 159/365 (43%), Gaps = 28/365 (7%)

Query: 116 ITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHV---VQVSAS 171
           +  G YH+L + ++ +V++ G +    LG G       + T    P  A +   V + A 
Sbjct: 304 LVAGNYHSLAVRTDGAVWAWGDNRYRQLGTG-------NLTSSPLPLQAGMTGGVTLVAG 356

Query: 172 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 231
             H+  +   G  ++ GDN     G   T  P   P  V  L  +     T+G   T  L
Sbjct: 357 YRHSVALGADGTAWSWGDNVFGQLGDT-TFEPRMAPVQVSGLA-LGRADATSGQLHTVML 414

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
              G +   G N  GQLG+G   D   P  +     +  V+ +A+G  +  A+  +G V+
Sbjct: 415 GANGRLWAWGDNQQGQLGNGTQQDSSLPLPV----NLTDVISVASGYRHTAALRSDGTVW 470

Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 351
           ++G      LG G   D  +P  +Q     G  V  ++ GD H +AL S+G V+ WG   
Sbjct: 471 TWGMNRFGQLGEGTVTD--RPTPVQVVGLGG--VTAIATGDNHSLALRSNGTVWAWGFNR 526

Query: 352 CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 411
            G LG G  +D+  P   S L + +A  + A    +  L   G+V+ FG+   G LG   
Sbjct: 527 YGQLGDGTAVDRRQPVQASGLSNIVA--IAAGGSHSLALRSDGTVWAFGYNFDGQLG--- 581

Query: 412 RGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCL 471
            G     L P  + ++    V  ++ G  +++ +   G ++ +G N   QLG  T +G  
Sbjct: 582 NGTRTWTLVP--VQAVGLSSVVSLAAGSLYSLALRADGTVWAWGYNASGQLGVGTTQGSA 639

Query: 472 EPTEI 476
           +P ++
Sbjct: 640 QPLQV 644



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 93/349 (26%), Positives = 149/349 (42%), Gaps = 63/349 (18%)

Query: 112 GNMQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSA 170
           G    T+G+ HT+++ +N  +++ G +  G LG+G +    +    +N      V+ V++
Sbjct: 400 GRADATSGQLHTVMLGANGRLWAWGDNQQGQLGNGTQQDSSLPLP-VNL---TDVISVAS 455

Query: 171 SENHAAFVLQSGQVFTCGDNSSFCCGHRD-TNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
              H A +   G V+T G N     G    T+RP   P  V  L GV    +  G N + 
Sbjct: 456 GYRHTAALRSDGTVWTWGMNRFGQLGEGTVTDRPT--PVQVVGLGGVTA--IATGDNHSL 511

Query: 230 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTP------------------------------ 259
            L   G V   G N +GQLG G  +DR  P                              
Sbjct: 512 ALRSNGTVWAWGFNRYGQLGDGTAVDRRQPVQASGLSNIVAIAAGGSHSLALRSDGTVWA 571

Query: 260 ---------------KSIAPLEEVG--SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLG 302
                           ++ P++ VG  SVV +AAG  Y LA+  +G V+++G  ++  LG
Sbjct: 572 FGYNFDGQLGNGTRTWTLVPVQAVGLSSVVSLAAGSLYSLALRADGTVWAWGYNASGQLG 631

Query: 303 HGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEID 362
            G      QP  +Q     GI    ++AG  H +AL S G+V+ WG  + G LG+G    
Sbjct: 632 VGTTQGSAQP--LQVPGLSGI--TSIAAGSYHSLALRSDGWVWAWGFNFEGQLGNGTSTP 687

Query: 363 KTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 411
           +  P  ++ + +  AV + A  + +  +   G+V+ +G    G LG  D
Sbjct: 688 RLSPGLVAGMSN--AVAIIAGDQHSLAMKADGTVWAWGLNIKGQLGTGD 734



 Score = 79.0 bits (193), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 73/256 (28%), Positives = 112/256 (43%), Gaps = 14/256 (5%)

Query: 112 GNMQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSA 170
           G   I TG  H+L L SN +V++ G +  G LG G   T       +     +++V ++A
Sbjct: 499 GVTAIATGDNHSLALRSNGTVWAWGFNRYGQLGDG---TAVDRRQPVQASGLSNIVAIAA 555

Query: 171 SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
             +H+  +   G V+  G N     G+  T      P  V+A+       + AG  ++  
Sbjct: 556 GGSHSLALRSDGTVWAFGYNFDGQLGN-GTRTWTLVP--VQAVGLSSVVSLAAGSLYSLA 612

Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 290
           L   G V   G N  GQLG G T     P  +  L     +  IAAG  + LA+  +G V
Sbjct: 613 LRADGTVWAWGYNASGQLGVGTTQGSAQPLQVPGLS---GITSIAAGSYHSLALRSDGWV 669

Query: 291 YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKG 350
           +++G      LG+G     L P  +        + V + AGD+H +A+ + G V+ WG  
Sbjct: 670 WAWGFNFEGQLGNGTSTPRLSPGLVAGMS----NAVAIIAGDQHSLAMKADGTVWAWGLN 725

Query: 351 YCGALGHGDEIDKTLP 366
             G LG GD  +   P
Sbjct: 726 IKGQLGTGDTTEAWFP 741



 Score = 65.9 bits (159), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 56/205 (27%), Positives = 92/205 (44%), Gaps = 11/205 (5%)

Query: 272 VQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG 331
           V++A G  + LAV  +G V+++G      LG G   D+  P  +         V  V+AG
Sbjct: 53  VRLALGQYHSLAVHSDGTVFAWGFNRLGQLGDGTSRDKASPVQVAGL----TQVTSVAAG 108

Query: 332 DEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 391
           D++ +ALD+ G V+ WG    G LG G    + LP+ +S+L +   V + +       L 
Sbjct: 109 DQYSLALDADGAVWAWGDNASGQLGDGTLTSRLLPQRVSALSN--VVSLASGFAHVLALR 166

Query: 392 DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRL 451
             G+V+ +G      LG    G   +   P  +  L    V  +  G   ++ +   G L
Sbjct: 167 ADGTVWAWGDNRNNQLG---DGTLTRSSVPLQVPGLSG--VVAVVAGGSSSLALRADGTL 221

Query: 452 FGFGDNERAQLGHDTLRGCLEPTEI 476
           + +GDN   QLG  T    + P ++
Sbjct: 222 WAWGDNRYGQLGDGTTVRRITPVQV 246



 Score = 46.2 bits (108), Expect = 0.036,   Method: Compositional matrix adjust.
 Identities = 49/176 (27%), Positives = 77/176 (43%), Gaps = 13/176 (7%)

Query: 87  NGNWKRVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGP 146
           NG     L  +Q+V  SS +V  +AG++      Y   L ++ +V++ G +  G LG G 
Sbjct: 582 NGTRTWTLVPVQAVGLSS-VVSLAAGSL------YSLALRADGTVWAWGYNASGQLGVG- 633

Query: 147 ETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFR 206
            TTQ  S   +  P  + +  ++A   H+  +   G V+  G N     G+  T+ P   
Sbjct: 634 -TTQG-SAQPLQVPGLSGITSIAAGSYHSLALRSDGWVWAWGFNFEGQLGN-GTSTPRLS 690

Query: 207 PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSI 262
           P LV  +       + AG   +  +   G V   G N  GQLG GDT +   P  +
Sbjct: 691 PGLVAGMSNAVA--IIAGDQHSLAMKADGTVWAWGLNIKGQLGTGDTTEAWFPVQV 744


>gi|408501214|ref|YP_006865133.1| RCC1-like protein [Bifidobacterium asteroides PRL2011]
 gi|408466038|gb|AFU71567.1| RCC1-like protein [Bifidobacterium asteroides PRL2011]
          Length = 1086

 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 108/414 (26%), Positives = 174/414 (42%), Gaps = 61/414 (14%)

Query: 118 TGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRI---------NFPSAAHVVQV 168
           TG +   + S+ + ++ G +  G LG G       +  R+         + P+    VQV
Sbjct: 566 TGSFSLAVGSDGNAYAWGDNTYGQLGDGTANNSRYTPIRVKTPDRKTYPDLPADFTYVQV 625

Query: 169 SASENHAAFVLQSGQVFTCGD------------NSSFCCGHRDTNRPIFRPRLVEALKGV 216
           SA   H+  V   G  +  G+            NS      RD   P    R ++A+   
Sbjct: 626 SAGGRHSLAVGSDGYAYAWGNNNNGQLGNNTKTNSYVPVRIRDPGSPTDESRGLKAI--- 682

Query: 217 PCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGH---GDTLDRPTP----KSIAPLEE-V 268
              QV+AG   +  L+  G+ +  G + +GQLG+   G +   P P       +P +E +
Sbjct: 683 ---QVSAGYWHSLALSNDGYAYAWGYDWYGQLGNNTSGSSEYSPFPILVRNPDSPTDESM 739

Query: 269 G-SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHG------EQHDELQPR----AIQT 317
           G   +Q++AG  + LA+  NG VY++G  S   LG        + H     R    A  +
Sbjct: 740 GLKTIQVSAGNLHSLALDSNGYVYAWGWNSYGQLGDNTNDISEDSHSAFPVRVRDPANPS 799

Query: 318 FRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEID-----------KTLP 366
               G+  +++SAG +H +A+ S GY Y WG    G LG+    D           +   
Sbjct: 800 ETNMGLKAIQISAGYDHSMAVGSDGYAYAWGWNVKGQLGNNTISDSYSGNPVPVHVRDPA 859

Query: 367 EPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGF---PDRGVSDKVLRP-R 422
            P  + K   A QV A    +  +   G  YG+G+  +G LG     D  V   V  P  
Sbjct: 860 NPTDTSKGLKATQVSAGYWHSLAVGSDGYAYGWGYNWYGQLGNNTKTDSYVPVPVRDPAN 919

Query: 423 ILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 476
             D+ +    +QIS+G +H++ V   G ++ +G+N   +LG  T  G L P  +
Sbjct: 920 PTDTNKGLKATQISSGYWHSMAVGSEGYVYAWGNNGNGRLGDGTTNGKLAPVSV 973



 Score = 75.5 bits (184), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 76/295 (25%), Positives = 121/295 (41%), Gaps = 48/295 (16%)

Query: 114 MQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRI-----NFPSAAHV-- 165
           +Q++ G +H+L +SN    ++ G    G LG+    +   S   I     + P+   +  
Sbjct: 682 IQVSAGYWHSLALSNDGYAYAWGYDWYGQLGNNTSGSSEYSPFPILVRNPDSPTDESMGL 741

Query: 166 --VQVSASENHAAFVLQSGQVFTCGDNS-----------------SFCCGHRDTNRPIFR 206
             +QVSA   H+  +  +G V+  G NS                 +F    RD   P   
Sbjct: 742 KTIQVSAGNLHSLALDSNGYVYAWGWNSYGQLGDNTNDISEDSHSAFPVRVRDPANP--- 798

Query: 207 PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLD----RPTPKSI 262
               E   G+   Q++AG + +  +   G+ +  G N  GQLG+    D     P P  +
Sbjct: 799 ---SETNMGLKAIQISAGYDHSMAVGSDGYAYAWGWNVKGQLGNNTISDSYSGNPVPVHV 855

Query: 263 -APLEEVGS-----VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQ 316
             P     +       Q++AG  + LAV  +G  Y +G      LG+  + D   P  ++
Sbjct: 856 RDPANPTDTSKGLKATQVSAGYWHSLAVGSDGYAYGWGYNWYGQLGNNTKTDSYVPVPVR 915

Query: 317 -----TFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP 366
                T   KG+   ++S+G  H +A+ S GYVY WG    G LG G    K  P
Sbjct: 916 DPANPTDTNKGLKATQISSGYWHSMAVGSEGYVYAWGNNGNGRLGDGTTNGKLAP 970


>gi|390341358|ref|XP_003725437.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like
           [Strongylocentrotus purpuratus]
          Length = 658

 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 82/296 (27%), Positives = 144/296 (48%), Gaps = 10/296 (3%)

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
           ++  V ++ +VF  G NSS       +   I  P++  A+     +Q+ AG   T  ++ 
Sbjct: 367 NSLVVSENSEVFVWGSNSSHQLAE-GSQEKILLPKM--AISFAESQQIEAGQYCTFVISS 423

Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPS-YMLAVTGNGVVYS 292
            G V  CG  ++G+LG GD+ ++   K +     + + +  + G   + LA+T  G V+S
Sbjct: 424 DGSVRACGKGSYGRLGLGDSNNQTQLKKLNFDNSIITRISSSKGSDGHTLALTSEGQVFS 483

Query: 293 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 352
           +G G    LGHG    +  P+ I      G  VV +SAG  H   +   G +YTWG+G  
Sbjct: 484 WGDGDYGKLGHGNTLTQKYPKVILGVLM-GKVVVCISAGYRHSACVTDDGQLYTWGEGDY 542

Query: 353 GALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDR 412
           G LGHGD   + +P  +  + S++   VC       V  D+ +V+ FG    G LG  D 
Sbjct: 543 GRLGHGDSNSRNVPTLVKDV-SNVGKVVCGSSHTIAVSQDSRTVWSFGGGDNGKLGHGD- 600

Query: 413 GVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRL-FGFGDNERAQLGHDTL 467
             ++++ +P+I++SL    + ++  G   ++ +T  G++ F F   +R +    +L
Sbjct: 601 --TNRIYKPKIIESLIGLFIKKVGCGSQSSLALTSTGQVRFIFYKYQRLKKKKSSL 654



 Score = 83.2 bits (204), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 84/281 (29%), Positives = 130/281 (46%), Gaps = 12/281 (4%)

Query: 120 RYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 178
           + ++L++S NS VF  GS+    L  G +    +    I+F   A   Q+ A + +  FV
Sbjct: 365 KPNSLVVSENSEVFVWGSNSSHQLAEGSQEKILLPKMAISF---AESQQIEAGQ-YCTFV 420

Query: 179 LQS-GQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN-FTGFLTIRGH 236
           + S G V  CG  S    G  D+N      +L      +     + G +  T  LT  G 
Sbjct: 421 ISSDGSVRACGKGSYGRLGLGDSNNQTQLKKLNFDNSIITRISSSKGSDGHTLALTSEGQ 480

Query: 237 VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 296
           V + G   +G+LGHG+TL +  PK I  +     VV I+AG  +   VT +G +Y++G G
Sbjct: 481 VFSWGDGDYGKLGHGNTLTQKYPKVILGVLMGKVVVCISAGYRHSACVTDDGQLYTWGEG 540

Query: 297 SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL-DSSGYVYTWGKGYCGAL 355
               LGHG+ +     R + T  +   +V +V  G  H +A+   S  V+++G G  G L
Sbjct: 541 DYGRLGHGDSNS----RNVPTLVKDVSNVGKVVCGSSHTIAVSQDSRTVWSFGGGDNGKL 596

Query: 356 GHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSV 396
           GHGD      P+ + SL      +V    + +  L  TG V
Sbjct: 597 GHGDTNRIYKPKIIESLIGLFIKKVGCGSQSSLALTSTGQV 637


>gi|380792689|gb|AFE68220.1| RCC1 and BTB domain-containing protein 1, partial [Macaca mulatta]
          Length = 345

 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 78/255 (30%), Positives = 123/255 (48%), Gaps = 11/255 (4%)

Query: 230 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGSVVQIAAGPSYMLAVTGN 287
           ++T    V   G N    LG GD      PK +  L  +++ S+    +GP  +L+ T +
Sbjct: 36  YVTDDDEVFVFGLNYSNCLGTGDNQSTLVPKKLEGLSGKKIKSL-SYGSGPHVLLS-TED 93

Query: 288 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGI-HVVRVSAGDEHVVALDSSGYVYT 346
           GVVY++G      LG+G  +  + P  IQ      I  VV V+ G  H +AL + G V+ 
Sbjct: 94  GVVYAWGHNGYSQLGNGTTNQGIAP--IQVCTNLLIKQVVEVACGSHHSMALAADGEVFA 151

Query: 347 WGKGYCGALGHGDEIDKTLPEPLSS-LKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFG 405
           WG   CG +G G   ++  P  +++ L     V +   +  +  ++D G VYG+G+ G G
Sbjct: 152 WGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNG 211

Query: 406 SLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHD 465
            LG  + G     L P  + +L +  V+QI  G  HT+ +TD G L+ +G N   QLG  
Sbjct: 212 QLGLGNNG---NQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTG 268

Query: 466 TLRGCLEPTEIFIQE 480
                L P  I +++
Sbjct: 269 NKNNLLSPAHIMVEK 283



 Score = 88.2 bits (217), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 76/263 (28%), Positives = 121/263 (46%), Gaps = 14/263 (5%)

Query: 163 AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 222
           A V   SASE  A +V    +VF  G N S C G  D N+    P+ +E L G   K ++
Sbjct: 24  ACVFGTSASE--ALYVTDDDEVFVFGLNYSNCLGTGD-NQSTLVPKKLEGLSGKKIKSLS 80

Query: 223 AGLNFTGFLTIR-GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 281
            G      L+   G V+  G N + QLG+G T     P  +     +  VV++A G  + 
Sbjct: 81  YGSGPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGSHHS 140

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQT---FRRKGIHVVRVSAGDEHVVAL 338
           +A+  +G V+++G  +   +G G   ++  PR +      +R    VV ++ G    +A+
Sbjct: 141 MALAADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKR----VVGIACGQTSSMAV 196

Query: 339 DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYG 398
             +G VY WG    G LG G+  ++  P  +++L S    Q+      T  L D G +Y 
Sbjct: 197 LDNGEVYGWGYNGNGQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYA 256

Query: 399 FGWMGFGSLGFPDRGVSDKVLRP 421
           +G   +G LG    G  + +L P
Sbjct: 257 WGANTYGQLG---TGNKNNLLSP 276



 Score = 83.2 bits (204), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 63/228 (27%), Positives = 97/228 (42%), Gaps = 3/228 (1%)

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
           H     + G V+  G N     G+  TN+ I   ++   L      +V  G + +  L  
Sbjct: 86  HVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGSHHSMALAA 145

Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
            G V   G N  GQ+G G T ++PTP+ +     +  VV IA G +  +AV  NG VY +
Sbjct: 146 DGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGW 205

Query: 294 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 353
           G   N  LG G   ++L P  +       + V ++  G  H +AL   G +Y WG    G
Sbjct: 206 GYNGNGQLGLGNNGNQLTPVRVAALHS--VCVNQIVCGYAHTLALTDEGLLYAWGANTYG 263

Query: 354 ALGHGDEIDKTLPEPLSSLKSHLA-VQVCARKRKTFVLVDTGSVYGFG 400
            LG G++ +   P  +   K  +  +  C     +      G VY +G
Sbjct: 264 QLGTGNKNNLLSPAHIMVEKERVVEIAACHSAHTSAAKTQGGHVYMWG 311



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 56/184 (30%), Positives = 86/184 (46%), Gaps = 6/184 (3%)

Query: 114 MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +++  G +H++ L ++  VF+ G + CG +G G    Q       N      VV ++  +
Sbjct: 131 VEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQ 190

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
             +  VL +G+V+  G N +   G    N     P  V AL  V   Q+  G   T  LT
Sbjct: 191 TSSMAVLDNGEVYGWGYNGNGQLG-LGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALT 249

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY--MLAVTGNGVV 290
             G ++  G+NT+GQLG G+  +  +P  I   +E   VV+IAA  S     A T  G V
Sbjct: 250 DEGLLYAWGANTYGQLGTGNKNNLLSPAHIMVEKE--RVVEIAACHSAHTSAAKTQGGHV 307

Query: 291 YSFG 294
           Y +G
Sbjct: 308 YMWG 311


>gi|297694075|ref|XP_002824322.1| PREDICTED: RCC1 and BTB domain-containing protein 1 [Pongo abelii]
 gi|332241941|ref|XP_003270143.1| PREDICTED: RCC1 and BTB domain-containing protein 1 [Nomascus
           leucogenys]
          Length = 531

 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 78/255 (30%), Positives = 123/255 (48%), Gaps = 11/255 (4%)

Query: 230 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGSVVQIAAGPSYMLAVTGN 287
           ++T    V   G N    LG GD      PK +  L  +++ S+    +GP  +L+ T +
Sbjct: 36  YVTDNDEVFVFGLNYSNCLGTGDNQSTLVPKKLEGLCGKKIKSL-SYGSGPHVLLS-TED 93

Query: 288 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGI-HVVRVSAGDEHVVALDSSGYVYT 346
           GVVY++G      LG+G  +  + P  IQ      I  VV V+ G  H +AL + G V+ 
Sbjct: 94  GVVYAWGHNGYSQLGNGTTNQGIAP--IQVCTNLLIKQVVEVACGSHHSMALAADGEVFA 151

Query: 347 WGKGYCGALGHGDEIDKTLPEPLSS-LKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFG 405
           WG   CG +G G   ++  P  +++ L     V +   +  +  ++D G VYG+G+ G G
Sbjct: 152 WGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNG 211

Query: 406 SLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHD 465
            LG  + G     L P  + +L +  V+QI  G  HT+ +TD G L+ +G N   QLG  
Sbjct: 212 QLGLGNNG---NQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTG 268

Query: 466 TLRGCLEPTEIFIQE 480
                L P  I +++
Sbjct: 269 NKNNLLSPAHIMVEK 283



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 76/263 (28%), Positives = 122/263 (46%), Gaps = 14/263 (5%)

Query: 163 AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 222
           A V   SASE  A +V  + +VF  G N S C G  D N+    P+ +E L G   K ++
Sbjct: 24  ACVFGTSASE--ALYVTDNDEVFVFGLNYSNCLGTGD-NQSTLVPKKLEGLCGKKIKSLS 80

Query: 223 AGLNFTGFLTIR-GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 281
            G      L+   G V+  G N + QLG+G T     P  +     +  VV++A G  + 
Sbjct: 81  YGSGPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGSHHS 140

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRV---SAGDEHVVAL 338
           +A+  +G V+++G  +   +G G   ++  PR +       +H+ RV   + G    +A+
Sbjct: 141 MALAADGEVFAWGYNNCGQVGSGSTANQPTPRKV----TNCLHIKRVVGIACGQTSSMAV 196

Query: 339 DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYG 398
             +G VY WG    G LG G+  ++  P  +++L S    Q+      T  L D G +Y 
Sbjct: 197 LDNGEVYGWGYNGNGQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYA 256

Query: 399 FGWMGFGSLGFPDRGVSDKVLRP 421
           +G   +G LG    G  + +L P
Sbjct: 257 WGANTYGQLG---TGNKNNLLSP 276



 Score = 83.2 bits (204), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 63/228 (27%), Positives = 97/228 (42%), Gaps = 3/228 (1%)

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
           H     + G V+  G N     G+  TN+ I   ++   L      +V  G + +  L  
Sbjct: 86  HVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGSHHSMALAA 145

Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
            G V   G N  GQ+G G T ++PTP+ +     +  VV IA G +  +AV  NG VY +
Sbjct: 146 DGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGW 205

Query: 294 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 353
           G   N  LG G   ++L P  +       + V ++  G  H +AL   G +Y WG    G
Sbjct: 206 GYNGNGQLGLGNNGNQLTPVRVAALH--SVCVNQIVCGYAHTLALTDEGLLYAWGANTYG 263

Query: 354 ALGHGDEIDKTLPEPLSSLKSHLA-VQVCARKRKTFVLVDTGSVYGFG 400
            LG G++ +   P  +   K  +  +  C     +      G VY +G
Sbjct: 264 QLGTGNKNNLLSPAHIMVEKERVVEIAACHSAHTSAAKTQGGHVYMWG 311



 Score = 60.8 bits (146), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 56/184 (30%), Positives = 86/184 (46%), Gaps = 6/184 (3%)

Query: 114 MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +++  G +H++ L ++  VF+ G + CG +G G    Q       N      VV ++  +
Sbjct: 131 VEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQ 190

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
             +  VL +G+V+  G N +   G    N     P  V AL  V   Q+  G   T  LT
Sbjct: 191 TSSMAVLDNGEVYGWGYNGNGQLG-LGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALT 249

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY--MLAVTGNGVV 290
             G ++  G+NT+GQLG G+  +  +P  I  + E   VV+IAA  S     A T  G V
Sbjct: 250 DEGLLYAWGANTYGQLGTGNKNNLLSPAHI--MVEKERVVEIAACHSAHTSAAKTQGGHV 307

Query: 291 YSFG 294
           Y +G
Sbjct: 308 YMWG 311


>gi|395859036|ref|XP_003801852.1| PREDICTED: RCC1 and BTB domain-containing protein 1 isoform 1
           [Otolemur garnettii]
          Length = 531

 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 78/255 (30%), Positives = 123/255 (48%), Gaps = 11/255 (4%)

Query: 230 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGSVVQIAAGPSYMLAVTGN 287
           ++T    V   G N    LG GD      PK +  L  +++ S+    +GP  +L+ T +
Sbjct: 36  YVTDSDEVFVFGLNYSNCLGTGDNQSTLVPKKLEALCGKKIKSL-SYGSGPHVLLS-TED 93

Query: 288 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGI-HVVRVSAGDEHVVALDSSGYVYT 346
           GVVY++G      LG+G  +  + P  IQ      I  VV V+ G  H +AL + G V+ 
Sbjct: 94  GVVYAWGHNGYSQLGNGTTNQGIAP--IQVCTNLLIKQVVEVACGSHHSMALAADGEVFA 151

Query: 347 WGKGYCGALGHGDEIDKTLPEPLSS-LKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFG 405
           WG   CG +G G   ++  P  +++ L     V +   +  +  ++D G VYG+G+ G G
Sbjct: 152 WGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNG 211

Query: 406 SLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHD 465
            LG  + G     L P  + +L +  V+QI  G  HT+ +TD G L+ +G N   QLG  
Sbjct: 212 QLGLGNNG---NQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTG 268

Query: 466 TLRGCLEPTEIFIQE 480
                L P  I +++
Sbjct: 269 NKNNLLSPAHIMVEK 283



 Score = 83.2 bits (204), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 63/228 (27%), Positives = 97/228 (42%), Gaps = 3/228 (1%)

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
           H     + G V+  G N     G+  TN+ I   ++   L      +V  G + +  L  
Sbjct: 86  HVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGSHHSMALAA 145

Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
            G V   G N  GQ+G G T ++PTP+ +     +  VV IA G +  +AV  NG VY +
Sbjct: 146 DGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGW 205

Query: 294 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 353
           G   N  LG G   ++L P  +       + V ++  G  H +AL   G +Y WG    G
Sbjct: 206 GYNGNGQLGLGNNGNQLTPVRVAALH--SVCVNQIVCGYAHTLALTDEGLLYAWGANTYG 263

Query: 354 ALGHGDEIDKTLPEPLSSLKSHLA-VQVCARKRKTFVLVDTGSVYGFG 400
            LG G++ +   P  +   K  +  +  C     +      G VY +G
Sbjct: 264 QLGTGNKNNLLSPAHIMVEKERIVEIAACHSAHTSAAKTQGGHVYMWG 311


>gi|330837333|ref|YP_004411974.1| hypothetical protein [Sphaerochaeta coccoides DSM 17374]
 gi|329749236|gb|AEC02592.1| hypothetical protein Spico_1388 [Sphaerochaeta coccoides DSM 17374]
          Length = 708

 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 92/334 (27%), Positives = 145/334 (43%), Gaps = 24/334 (7%)

Query: 168 VSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG----VPCKQVTA 223
           VSA   H   +  +G ++  GDN     G   T+      ++ +   G         V A
Sbjct: 338 VSAGSYHTMILKNNGTLWATGDNRFGQLGDGTTDDRSIPVQVKDDTDGSGFMTDVAAVAA 397

Query: 224 GLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTP----KSIAPLEEVGSVVQIAAGPS 279
           G N T  L   G +   G N  GQLG G T DR TP     S  P + +  V  ++AG  
Sbjct: 398 GENHTMILKKDGTLWATGYNGEGQLGDGTTTDRSTPVQVKASTDPNDFMTDVAAVSAGNE 457

Query: 280 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 339
           Y + +  +G +++ G   +  LG G+  +   P  + T       V  VSAG EH + L 
Sbjct: 458 YTMILKKDGTLWATGYNDSSQLGVGDNTNRSTPVQVMT------GVAAVSAGLEHTMILK 511

Query: 340 SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGF 399
             G ++  G    G LG G+  +K+ P P+S + S +A +V A    T +L   G+++  
Sbjct: 512 KDGTLWATGWNSAGELGIGNNENKSTPVPVSFMGSDVA-EVSAGSSYTMILKKDGTLWAT 570

Query: 400 GWMGFGSLGFPDRGVSDKVLRPRILDSLRA-----HHVSQISTGLYHTVVVTDRGRLFGF 454
           G+  +G LG    G       P  + +         +V+ +S G  +T+++   G L+  
Sbjct: 571 GFNYYGELGLGTSGSGTNKSTPEQVKASTTPDDFMTNVAAVSAGSSYTMILKKDGTLWAT 630

Query: 455 GDNERAQLGHDTLRGCLEPTEIFIQEMEEDTGLA 488
           G N+  QLG D   G +      +Q M   TG+A
Sbjct: 631 GSNQYGQLG-DGTSGAVNNKSTPVQVM---TGVA 660



 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 94/369 (25%), Positives = 162/369 (43%), Gaps = 37/369 (10%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAA----HVVQVSA 170
           ++ G YHT+++ N+ ++++ G +  G LG G    + +     +    +     V  V+A
Sbjct: 338 VSAGSYHTMILKNNGTLWATGDNRFGQLGDGTTDDRSIPVQVKDDTDGSGFMTDVAAVAA 397

Query: 171 SENHAAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEALKG-----VPCKQVTAG 224
            ENH   + + G ++  G N     G    T+R    P  V+A             V+AG
Sbjct: 398 GENHTMILKKDGTLWATGYNGEGQLGDGTTTDRST--PVQVKASTDPNDFMTDVAAVSAG 455

Query: 225 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 284
             +T  L   G +   G N   QLG GD  +R TP     ++ +  V  ++AG  + + +
Sbjct: 456 NEYTMILKKDGTLWATGYNDSSQLGVGDNTNRSTP-----VQVMTGVAAVSAGLEHTMIL 510

Query: 285 TGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
             +G +++ G  S   LG G   ++  P  +      G  V  VSAG  + + L   G +
Sbjct: 511 KKDGTLWATGWNSAGELGIGNNENKSTPVPVSFM---GSDVAEVSAGSSYTMILKKDGTL 567

Query: 345 YTWGKGYCGALG---HGDEIDKTLPEPLSS------LKSHLAVQVCARKRKTFVLVDTGS 395
           +  G  Y G LG    G   +K+ PE + +        +++A  V A    T +L   G+
Sbjct: 568 WATGFNYYGELGLGTSGSGTNKSTPEQVKASTTPDDFMTNVAA-VSAGSSYTMILKKDGT 626

Query: 396 VYGFGWMGFGSLGFPDRG-VSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 454
           ++  G   +G LG    G V++K    +++  + A     +S G  HT+++   G L+G 
Sbjct: 627 LWATGSNQYGQLGDGTSGAVNNKSTPVQVMTGVAA-----VSAGWSHTMILKKDGTLWGT 681

Query: 455 GDNERAQLG 463
           G N   QLG
Sbjct: 682 GHNVFGQLG 690



 Score = 79.0 bits (193), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 66/254 (25%), Positives = 109/254 (42%), Gaps = 15/254 (5%)

Query: 217 PCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEE----VGSVV 272
           P + V+AG   T  L   G +   G N  GQLG G T DR  P  +    +    +  V 
Sbjct: 334 PYRAVSAGSYHTMILKNNGTLWATGDNRFGQLGDGTTDDRSIPVQVKDDTDGSGFMTDVA 393

Query: 273 QIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKG---IHVVRVS 329
            +AAG ++ + +  +G +++ G      LG G   D   P  ++           V  VS
Sbjct: 394 AVAAGENHTMILKKDGTLWATGYNGEGQLGDGTTTDRSTPVQVKASTDPNDFMTDVAAVS 453

Query: 330 AGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFV 389
           AG+E+ + L   G ++  G      LG GD  +++ P  + +        V A    T +
Sbjct: 454 AGNEYTMILKKDGTLWATGYNDSSQLGVGDNTNRSTPVQVMT----GVAAVSAGLEHTMI 509

Query: 390 LVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRG 449
           L   G+++  GW   G LG    G ++    P  + S     V+++S G  +T+++   G
Sbjct: 510 LKKDGTLWATGWNSAGELGI---GNNENKSTPVPV-SFMGSDVAEVSAGSSYTMILKKDG 565

Query: 450 RLFGFGDNERAQLG 463
            L+  G N   +LG
Sbjct: 566 TLWATGFNYYGELG 579



 Score = 75.5 bits (184), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 84/322 (26%), Positives = 137/322 (42%), Gaps = 27/322 (8%)

Query: 116 ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQC--VSFTRINFPS--AAHVVQVSA 170
           +  G  HT+++  + ++++ G +  G LG G  T +   V       P+     V  VSA
Sbjct: 395 VAAGENHTMILKKDGTLWATGYNGEGQLGDGTTTDRSTPVQVKASTDPNDFMTDVAAVSA 454

Query: 171 SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
              +   + + G ++  G N S   G  D      R   V+ + GV    V+AGL  T  
Sbjct: 455 GNEYTMILKKDGTLWATGYNDSSQLGVGDNTN---RSTPVQVMTGVAA--VSAGLEHTMI 509

Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS-VVQIAAGPSYMLAVTGNGV 289
           L   G +   G N+ G+LG G+  ++ TP    P+  +GS V +++AG SY + +  +G 
Sbjct: 510 LKKDGTLWATGWNSAGELGIGNNENKSTP---VPVSFMGSDVAEVSAGSSYTMILKKDGT 566

Query: 290 VYSFGSGSNFCLGHG------EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 343
           +++ G      LG G       +    Q +A  T      +V  VSAG  + + L   G 
Sbjct: 567 LWATGFNYYGELGLGTSGSGTNKSTPEQVKASTTPDDFMTNVAAVSAGSSYTMILKKDGT 626

Query: 344 VYTWGKGYCGALGHGDE---IDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 400
           ++  G    G LG G      +K+ P  + +        V A    T +L   G+++G G
Sbjct: 627 LWATGSNQYGQLGDGTSGAVNNKSTPVQVMTG----VAAVSAGWSHTMILKKDGTLWGTG 682

Query: 401 WMGFGSLGFPDRGVSDKVLRPR 422
              FG LG  D G +     P 
Sbjct: 683 HNVFGQLGLGDSGSASNRSTPE 704



 Score = 65.5 bits (158), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 70/280 (25%), Positives = 122/280 (43%), Gaps = 34/280 (12%)

Query: 104 SDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAA 163
           +D+   SAGN       Y  +L  + ++++ G +    LG G  T +      +      
Sbjct: 447 TDVAAVSAGN------EYTMILKKDGTLWATGYNDSSQLGVGDNTNRSTPVQVM-----T 495

Query: 164 HVVQVSASENHAAFVLQSGQVFTCGDNSSFCCG-HRDTNRPIFRPRLVEALKGVPCKQVT 222
            V  VSA   H   + + G ++  G NS+   G   + N+    P    +  G    +V+
Sbjct: 496 GVAAVSAGLEHTMILKKDGTLWATGWNSAGELGIGNNENKSTPVPV---SFMGSDVAEVS 552

Query: 223 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDT---LDRPTPK----SIAPLEEVGSVVQIA 275
           AG ++T  L   G +   G N +G+LG G +    ++ TP+    S  P + + +V  ++
Sbjct: 553 AGSSYTMILKKDGTLWATGFNYYGELGLGTSGSGTNKSTPEQVKASTTPDDFMTNVAAVS 612

Query: 276 AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ---HDELQPRAIQTFRRKGIHVVRVSAGD 332
           AG SY + +  +G +++ GS     LG G     +++  P  + T       V  VSAG 
Sbjct: 613 AGSSYTMILKKDGTLWATGSNQYGQLGDGTSGAVNNKSTPVQVMT------GVAAVSAGW 666

Query: 333 EHVVALDSSGYVYTWGKGYCGALGHGDE---IDKTLPEPL 369
            H + L   G ++  G    G LG GD     +++ PE +
Sbjct: 667 SHTMILKKDGTLWGTGHNVFGQLGLGDSGSASNRSTPEQV 706


>gi|354481280|ref|XP_003502830.1| PREDICTED: serine/threonine-protein kinase Nek9-like [Cricetulus
           griseus]
          Length = 1019

 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 83/276 (30%), Positives = 129/276 (46%), Gaps = 23/276 (8%)

Query: 207 PRLVEALK-GVPCKQVTAGLNFTGFLTIRGHVHTC-----GSNTHGQLGHGDTLDRPTPK 260
           P+ ++ +K G   +QV AG      +T+   ++T      G+  HGQLGHGD      PK
Sbjct: 402 PQKLDVIKSGCSARQVCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDKASYRQPK 461

Query: 261 SIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH--DELQPRAIQTF 318
            +  L+   ++ Q++ G  + + VT  G +Y+FGS    C+G  +    + L+P  +  F
Sbjct: 462 HVEKLQG-KAIHQVSCGDDFTVCVTDEGQLYAFGSDYYGCMGVDKVSGSEVLEPMQLNFF 520

Query: 319 RRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAV 378
               +   +VS GD HVVAL  +  VY+WG G  G LG   E D   P+ +   K+ + V
Sbjct: 521 LSNPVE--QVSCGDNHVVALTRNKEVYSWGCGEYGRLGLDSEEDYYTPQRVDVPKALIIV 578

Query: 379 QVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRP-----------RILDSL 427
            V      TF+L  +G V   G   F  LG  ++ +S  +               +   L
Sbjct: 579 AVQCGCDGTFLLTQSGKVLACGLNEFNKLGL-NQCMSGIINHEAYHEVPYTTSFTLAKQL 637

Query: 428 RAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 463
             + +  I+ G  HT  + +RGRL  FG N+  QLG
Sbjct: 638 SFYKIRTIAPGKTHTAAIDERGRLLTFGCNKCGQLG 673



 Score = 66.6 bits (161), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 73/306 (23%), Positives = 127/306 (41%), Gaps = 38/306 (12%)

Query: 115 QITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPET-TQCVSFTRINFPSAAHVVQVSASE 172
           Q++ G   T+ +++   +++ GS   G +G    + ++ +   ++NF  +  V QVS  +
Sbjct: 473 QVSCGDDFTVCVTDEGQLYAFGSDYYGCMGVDKVSGSEVLEPMQLNFFLSNPVEQVSCGD 532

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHR-----DTNRPIFRPRLVEALKGVPCKQVTAGLNF 227
           NH   + ++ +V++ G      CG       D+    + P+ V+  K +    V  G + 
Sbjct: 533 NHVVALTRNKEVYSWG------CGEYGRLGLDSEEDYYTPQRVDVPKALIIVAVQCGCDG 586

Query: 228 TGFLTIRGHVHTCGSNTHGQLGHGDTL----------DRPTPKSIAPLEEVG--SVVQIA 275
           T  LT  G V  CG N   +LG    +          + P   S    +++    +  IA
Sbjct: 587 TFLLTQSGKVLACGLNEFNKLGLNQCMSGIINHEAYHEVPYTTSFTLAKQLSFYKIRTIA 646

Query: 276 AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTF--RRKGIHVVRVSAGDE 333
            G ++  A+   G + +FG      LG G     L    I        G  V+RVS GDE
Sbjct: 647 PGKTHTAAIDERGRLLTFGCNKCGQLGVGNYKKRL---GINLLGGPLGGKQVIRVSCGDE 703

Query: 334 HVVALDSSGYVYTWGKGYCGALG-------HGDEIDKTLPEPLSSLKSHLAVQVCARKRK 386
             +A     +++ WG G  G L        HG +I  + P P+     H+    C R   
Sbjct: 704 FTIAATDDNHIFAWGNGGNGRLAMTPTERPHGSDICTSWPRPIFGSLHHVPDLSC-RGWH 762

Query: 387 TFVLVD 392
           T ++V+
Sbjct: 763 TILIVE 768



 Score = 66.2 bits (160), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 45/164 (27%), Positives = 72/164 (43%), Gaps = 6/164 (3%)

Query: 320 RKGIHVVRVSAGDEHVVALDSSGYVYTW-----GKGYCGALGHGDEIDKTLPEPLSSLKS 374
           + G    +V AG+ H   +     +YTW     G    G LGHGD+     P+ +  L+ 
Sbjct: 409 KSGCSARQVCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDKASYRQPKHVEKLQG 468

Query: 375 HLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQ 434
               QV      T  + D G +Y FG   +G +G  D+    +VL P  L+   ++ V Q
Sbjct: 469 KAIHQVSCGDDFTVCVTDEGQLYAFGSDYYGCMGV-DKVSGSEVLEPMQLNFFLSNPVEQ 527

Query: 435 ISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFI 478
           +S G  H V +T    ++ +G  E  +LG D+      P  + +
Sbjct: 528 VSCGDNHVVALTRNKEVYSWGCGEYGRLGLDSEEDYYTPQRVDV 571



 Score = 66.2 bits (160), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 80/375 (21%), Positives = 147/375 (39%), Gaps = 28/375 (7%)

Query: 98  QSVEHSSDIVETSAGNMQITTGRYHTLLIS-NSSVFSC-----GSSLCGVLGHGPETTQC 151
           +S     D++++     Q+  G  H  +++    +++      G+ L G LGHG + +  
Sbjct: 399 KSTPQKLDVIKSGCSARQVCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDKASY- 457

Query: 152 VSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCG-HRDTNRPIFRPRLV 210
                +       + QVS  ++    V   GQ++  G +   C G  + +   +  P  +
Sbjct: 458 RQPKHVEKLQGKAIHQVSCGDDFTVCVTDEGQLYAFGSDYYGCMGVDKVSGSEVLEPMQL 517

Query: 211 EALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSI-APLEEVG 269
                 P +QV+ G N    LT    V++ G   +G+LG     D  TP+ +  P   + 
Sbjct: 518 NFFLSNPVEQVSCGDNHVVALTRNKEVYSWGCGEYGRLGLDSEEDYYTPQRVDVPKALII 577

Query: 270 SVVQIAAGPSYMLAVTGNGVVYSFGS----GSNFCL----GHGEQHDELQPRAIQTFRRK 321
             VQ     +++L  +G  +          G N C+     H   H+     +    ++ 
Sbjct: 578 VAVQCGCDGTFLLTQSGKVLACGLNEFNKLGLNQCMSGIINHEAYHEVPYTTSFTLAKQL 637

Query: 322 GIHVVR-VSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLS-SLKSHLAVQ 379
             + +R ++ G  H  A+D  G + T+G   CG LG G+   +     L   L     ++
Sbjct: 638 SFYKIRTIAPGKTHTAAIDERGRLLTFGCNKCGQLGVGNYKKRLGINLLGGPLGGKQVIR 697

Query: 380 VCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD------RGVSDKVLRPRILDSLRAHHVS 433
           V      T    D   ++ +G  G G L            +     RP I  SL  HHV 
Sbjct: 698 VSCGDEFTIAATDDNHIFAWGNGGNGRLAMTPTERPHGSDICTSWPRP-IFGSL--HHVP 754

Query: 434 QISTGLYHTVVVTDR 448
            +S   +HT+++ ++
Sbjct: 755 DLSCRGWHTILIVEK 769



 Score = 62.4 bits (150), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 96/381 (25%), Positives = 155/381 (40%), Gaps = 47/381 (12%)

Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 179
           R  T+  +  +V +  +S   V G G  T Q +   +    S     QV A   H A V 
Sbjct: 373 RSSTVTEAPIAVVTSRTSEVYVWGGGKSTPQKLDVIK----SGCSARQVCAGNTHFAVVT 428

Query: 180 QSGQVFTC-----GDNSSFCCGHRDTNRPIFR-PRLVEALKGVPCKQVTAGLNFTGFLTI 233
              +++T      G       GH D  +  +R P+ VE L+G    QV+ G +FT  +T 
Sbjct: 429 VEKELYTWVNMQGGTKLHGQLGHGD--KASYRQPKHVEKLQGKAIHQVSCGDDFTVCVTD 486

Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPT-PKSIAPLE----EVGSVVQIAAGPSYMLAVTGNG 288
            G ++  GS+ +G +G    +D+ +  + + P++        V Q++ G ++++A+T N 
Sbjct: 487 EGQLYAFGSDYYGCMG----VDKVSGSEVLEPMQLNFFLSNPVEQVSCGDNHVVALTRNK 542

Query: 289 VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 348
            VYS+G G    LG   + D   P+ +     K + +V V  G +    L  SG V   G
Sbjct: 543 EVYSWGCGEYGRLGLDSEEDYYTPQRVDV--PKALIIVAVQCGCDGTFLLTQSGKVLACG 600

Query: 349 KGYCGALGHGD------------EIDKTLPEPLSSLKSHLAVQVCAR-KRKTFVLVDTGS 395
                 LG               E+  T    L+   S   ++  A  K  T  + + G 
Sbjct: 601 LNEFNKLGLNQCMSGIINHEAYHEVPYTTSFTLAKQLSFYKIRTIAPGKTHTAAIDERGR 660

Query: 396 VYGFGWMGFGSLGFPDRGVSDKVLRPRIL-DSLRAHHVSQISTGLYHTVVVTDRGRLFGF 454
           +  FG    G LG    G   K L   +L   L    V ++S G   T+  TD   +F +
Sbjct: 661 LLTFGCNKCGQLGV---GNYKKRLGINLLGGPLGGKQVIRVSCGDEFTIAATDDNHIFAW 717

Query: 455 GDNERAQLGHDTLRGCLEPTE 475
           G+    +L        + PTE
Sbjct: 718 GNGGNGRLA-------MTPTE 731



 Score = 49.3 bits (116), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 43/147 (29%), Positives = 65/147 (44%), Gaps = 17/147 (11%)

Query: 335 VVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHL-AVQVCARKRKTFVLVDT 393
            V    +  VY WG G            K+ P+ L  +KS   A QVCA      V+   
Sbjct: 383 AVVTSRTSEVYVWGGG------------KSTPQKLDVIKSGCSARQVCAGNTHFAVVTVE 430

Query: 394 GSVYGFGWMGFGSLGFPDRGVSDKV--LRPRILDSLRAHHVSQISTGLYHTVVVTDRGRL 451
             +Y +  M  G+      G  DK    +P+ ++ L+   + Q+S G   TV VTD G+L
Sbjct: 431 KELYTWVNMQGGTKLHGQLGHGDKASYRQPKHVEKLQGKAIHQVSCGDDFTVCVTDEGQL 490

Query: 452 FGFGDNERAQLGHDTLRG--CLEPTEI 476
           + FG +    +G D + G   LEP ++
Sbjct: 491 YAFGSDYYGCMGVDKVSGSEVLEPMQL 517


>gi|443697240|gb|ELT97775.1| hypothetical protein CAPTEDRAFT_180059 [Capitella teleta]
          Length = 453

 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 80/285 (28%), Positives = 135/285 (47%), Gaps = 13/285 (4%)

Query: 200 TNRPIF---RPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHG-DTLD 255
           T  PIF    P  +  ++ + C   +AG N    +T    V++ GSN  G LG G D + 
Sbjct: 6   TKWPIFSLLEPSFIATIR-MACVLGSAG-NEAIVITNDDEVYSLGSNCSGCLGLGSDAMS 63

Query: 256 RPTPKSIAPLEEVGSVVQIAAGP-SYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRA 314
              P+ +  L +  ++V  A G   ++LA T  G VYS+G      LG+G  +    P  
Sbjct: 64  GLEPRKVEQLCK-KNIVSFAYGSGPHVLATTNAGEVYSWGHNGYCQLGNGSTNQGPTPTP 122

Query: 315 IQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSS-LK 373
           + T    G  +  ++ G  H +AL S G ++ WG+  CG +G G   ++  P  +++ + 
Sbjct: 123 V-TSSLLGKRITAIACGSHHSMALSSEGEIFAWGQNNCGQVGSGTTSNQPTPRKVTACIG 181

Query: 374 SHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVS 433
           S   + +   +  +    DTG V+G+G+ G G LG  +        R  +L+++    ++
Sbjct: 182 SKKCISIACGQTSSIAAFDTGEVFGWGYNGNGQLGLGNNINQPNPCRLVVLNNV---FIT 238

Query: 434 QISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFI 478
           QI+ G  HT+ +TD G L+ +G N   QLG       + P  I +
Sbjct: 239 QIACGYAHTLGLTDEGSLYAWGANSYGQLGTGNKANMISPVRIAV 283



 Score = 85.9 bits (211), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 73/293 (24%), Positives = 122/293 (41%), Gaps = 20/293 (6%)

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG--- 229
           N A  +    +V++ G N S C G          PR VE L    CK+      +     
Sbjct: 33  NEAIVITNDDEVYSLGSNCSGCLGLGSDAMSGLEPRKVEQL----CKKNIVSFAYGSGPH 88

Query: 230 --FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN 287
               T  G V++ G N + QLG+G T   PTP  +        +  IA G  + +A++  
Sbjct: 89  VLATTNAGEVYSWGHNGYCQLGNGSTNQGPTPTPVTSSLLGKRITAIACGSHHSMALSSE 148

Query: 288 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 347
           G ++++G  +   +G G   ++  PR + T        + ++ G    +A   +G V+ W
Sbjct: 149 GEIFAWGQNNCGQVGSGTTSNQPTPRKV-TACIGSKKCISIACGQTSSIAAFDTGEVFGW 207

Query: 348 GKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSL 407
           G    G LG G+ I++  P  L  L +    Q+      T  L D GS+Y +G   +G L
Sbjct: 208 GYNGNGQLGLGNNINQPNPCRLVVLNNVFITQIACGYAHTLGLTDEGSLYAWGANSYGQL 267

Query: 408 GFPDRGVSDKVLRPRI----LDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGD 456
           G  ++      +R  +       + A H + +S  L      T  G++F +G 
Sbjct: 268 GTGNKANMISPVRIAVDLGRFVEIAATHYNHLSAAL------TQAGKVFMWGQ 314



 Score = 82.4 bits (202), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 68/293 (23%), Positives = 123/293 (41%), Gaps = 11/293 (3%)

Query: 110 SAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS 169
           SAGN  I       ++ ++  V+S GS+  G LG G +    +   ++      ++V  +
Sbjct: 30  SAGNEAI-------VITNDDEVYSLGSNCSGCLGLGSDAMSGLEPRKVEQLCKKNIVSFA 82

Query: 170 -ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFT 228
             S  H      +G+V++ G N     G+  TN+      +  +L G     +  G + +
Sbjct: 83  YGSGPHVLATTNAGEVYSWGHNGYCQLGNGSTNQGPTPTPVTSSLLGKRITAIACGSHHS 142

Query: 229 GFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG 288
             L+  G +   G N  GQ+G G T ++PTP+ +         + IA G +  +A    G
Sbjct: 143 MALSSEGEIFAWGQNNCGQVGSGTTSNQPTPRKVTACIGSKKCISIACGQTSSIAAFDTG 202

Query: 289 VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 348
            V+ +G   N  LG G   +  QP   +      + + +++ G  H + L   G +Y WG
Sbjct: 203 EVFGWGYNGNGQLGLGNNIN--QPNPCRLVVLNNVFITQIACGYAHTLGLTDEGSLYAWG 260

Query: 349 KGYCGALGHGDEIDKTLPEPLS-SLKSHLAVQVCARKRKTFVLVDTGSVYGFG 400
               G LG G++ +   P  ++  L   + +        +  L   G V+ +G
Sbjct: 261 ANSYGQLGTGNKANMISPVRIAVDLGRFVEIAATHYNHLSAALTQAGKVFMWG 313


>gi|156394306|ref|XP_001636767.1| predicted protein [Nematostella vectensis]
 gi|156223873|gb|EDO44704.1| predicted protein [Nematostella vectensis]
          Length = 363

 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 92/301 (30%), Positives = 137/301 (45%), Gaps = 13/301 (4%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           VV +S  + H+A V  +G+++T G N     GH +T +   +P +V+ LK      V  G
Sbjct: 37  VVNLSCGDEHSAVVTANGKLYTFGCNDWGQLGHGNT-KSYTKPSVVKKLKPEKVYMVACG 95

Query: 225 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 284
            N T   T  GH+++ G    GQLGHGD  D   PK I  L +V     +A G  +  A+
Sbjct: 96  RNHTIAATESGHLYSFGCGGDGQLGHGDAEDSHVPKIIEGL-DVQKYKHLACGSDFSAAI 154

Query: 285 TGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 344
           T NG +Y++GS      G GE  D   P  +    +    V  VS G  H+  +   G +
Sbjct: 155 TENGELYTWGSCGEGQNGLGE--DTEIPTRLHLHGK----VRMVSCGYYHMAVVTEDGSL 208

Query: 345 YTWGKGYCGALG-HGDEIDKTLP-EPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWM 402
           Y  G+   G LG   +++D T   + + S++  + V  C  +  T V+   GSVY FG  
Sbjct: 209 YMCGEKEGGKLGLDHEQLDNTSQLQKIKSIEDQVVVAACGAEF-TAVVTKNGSVYTFGQG 267

Query: 403 GFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQL 462
             G LG     +  +   P  +          +S G   T V+T  G L+ FGD    +L
Sbjct: 268 NQGQLGLGSSMMETEF--PERIPLFEKVKARTVSCGESFTAVITKHGNLYTFGDGRHGKL 325

Query: 463 G 463
           G
Sbjct: 326 G 326



 Score = 85.5 bits (210), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 57/197 (28%), Positives = 92/197 (46%), Gaps = 11/197 (5%)

Query: 270 SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS 329
           +VV ++ G  +   VT NG +Y+FG      LGHG      +P  ++  + + +++  V+
Sbjct: 36  AVVNLSCGDEHSAVVTANGKLYTFGCNDWGQLGHGNTKSYTKPSVVKKLKPEKVYM--VA 93

Query: 330 AGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFV 389
            G  H +A   SG++Y++G G  G LGHGD  D  +P+ +  L       +      +  
Sbjct: 94  CGRNHTIAATESGHLYSFGCGGDGQLGHGDAEDSHVPKIIEGLDVQKYKHLACGSDFSAA 153

Query: 390 LVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAH-HVSQISTGLYHTVVVTDR 448
           + + G +Y +G  G G  G  +           I   L  H  V  +S G YH  VVT+ 
Sbjct: 154 ITENGELYTWGSCGEGQNGLGE--------DTEIPTRLHLHGKVRMVSCGYYHMAVVTED 205

Query: 449 GRLFGFGDNERAQLGHD 465
           G L+  G+ E  +LG D
Sbjct: 206 GSLYMCGEKEGGKLGLD 222



 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 51/174 (29%), Positives = 78/174 (44%), Gaps = 9/174 (5%)

Query: 295 SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGA 354
           SG+ F  G     D L  +    F  +   VV +S GDEH   + ++G +YT+G    G 
Sbjct: 11  SGAVFTFGKTRFADNLANK----FWIRDDAVVNLSCGDEHSAVVTANGKLYTFGCNDWGQ 66

Query: 355 LGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGV 414
           LGHG+    T P  +  LK      V   +  T    ++G +Y FG  G G LG  D   
Sbjct: 67  LGHGNTKSYTKPSVVKKLKPEKVYMVACGRNHTIAATESGHLYSFGCGGDGQLGHGD--- 123

Query: 415 SDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQ--LGHDT 466
           ++    P+I++ L       ++ G   +  +T+ G L+ +G     Q  LG DT
Sbjct: 124 AEDSHVPKIIEGLDVQKYKHLACGSDFSAAITENGELYTWGSCGEGQNGLGEDT 177



 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 74/305 (24%), Positives = 119/305 (39%), Gaps = 54/305 (17%)

Query: 114 MQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           + ++ G  H+ +++ N  +++ G +  G LGHG  T      + +       V  V+   
Sbjct: 38  VNLSCGDEHSAVVTANGKLYTFGCNDWGQLGHG-NTKSYTKPSVVKKLKPEKVYMVACGR 96

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
           NH     +SG +++ G       GH D       P+++E L     K +  G +F+  +T
Sbjct: 97  NHTIAATESGHLYSFGCGGDGQLGHGDAEDS-HVPKIIEGLDVQKYKHLACGSDFSAAIT 155

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTP--------------------------------- 259
             G ++T GS   GQ G G+  + PT                                  
Sbjct: 156 ENGELYTWGSCGEGQNGLGEDTEIPTRLHLHGKVRMVSCGYYHMAVVTEDGSLYMCGEKE 215

Query: 260 -----------KSIAPLEEVGS----VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHG 304
                       + + L+++ S    VV  A G  +   VT NG VY+FG G+   LG G
Sbjct: 216 GGKLGLDHEQLDNTSQLQKIKSIEDQVVVAACGAEFTAVVTKNGSVYTFGQGNQGQLGLG 275

Query: 305 EQHDELQ-PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK 363
               E + P  I  F +  +    VS G+     +   G +YT+G G  G LG GDE   
Sbjct: 276 SSMMETEFPERIPLFEK--VKARTVSCGESFTAVITKHGNLYTFGDGRHGKLGLGDECFS 333

Query: 364 TLPEP 368
              +P
Sbjct: 334 NTFKP 338



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 52/214 (24%), Positives = 90/214 (42%), Gaps = 19/214 (8%)

Query: 121 YHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAH----VVQVSASENHAA 176
           +   +  N  +++ GS   G  G G +T           P+  H    V  VS    H A
Sbjct: 150 FSAAITENGELYTWGSCGEGQNGLGEDT---------EIPTRLHLHGKVRMVSCGYYHMA 200

Query: 177 FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTA--GLNFTGFLTIR 234
            V + G ++ CG+      G    +  +     ++ +K +  + V A  G  FT  +T  
Sbjct: 201 VVTEDGSLYMCGEKEGGKLGL--DHEQLDNTSQLQKIKSIEDQVVVAACGAEFTAVVTKN 258

Query: 235 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 294
           G V+T G    GQLG G ++         PL E      ++ G S+   +T +G +Y+FG
Sbjct: 259 GSVYTFGQGNQGQLGLGSSMMETEFPERIPLFEKVKARTVSCGESFTAVITKHGNLYTFG 318

Query: 295 SGSNFCLGHGEQ--HDELQPRAIQTFRRKGIHVV 326
            G +  LG G++   +  +P  ++ F    + +V
Sbjct: 319 DGRHGKLGLGDECFSNTFKPEKVKRFNNFTVKMV 352


>gi|410208768|gb|JAA01603.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
           containing protein 2 [Pan troglodytes]
 gi|410264078|gb|JAA20005.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
           containing protein 2 [Pan troglodytes]
 gi|410293804|gb|JAA25502.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
           containing protein 2 [Pan troglodytes]
 gi|410338541|gb|JAA38217.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
           containing protein 2 [Pan troglodytes]
          Length = 527

 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 76/254 (29%), Positives = 122/254 (48%), Gaps = 9/254 (3%)

Query: 230 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGSVVQIAAGPSYMLAVTGN 287
           ++T    V   G N    LG GD      PK +  L  +++ S+    +GP  +L+ T +
Sbjct: 36  YVTDNDEVFVFGLNYSNCLGTGDNQSTLVPKKLEGLCGKKIKSL-SYGSGPHVLLS-TED 93

Query: 288 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 347
           GVVY++G      LG+G  +  + P  + T       VV V+ G  H +AL + G V+ W
Sbjct: 94  GVVYAWGHNGYSQLGNGTTNQGIAPVQVCT-NLLIKQVVEVACGSHHSMALAADGEVFAW 152

Query: 348 GKGYCGALGHGDEIDKTLPEPLSS-LKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGS 406
           G   CG +G G   ++  P  +++ L     V +   +  +  ++D G VYG+G+ G G 
Sbjct: 153 GYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQ 212

Query: 407 LGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDT 466
           LG  + G     L P  + +L +  V+QI  G  HT+ +TD G L+ +G N   QLG   
Sbjct: 213 LGLGNNG---NQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGN 269

Query: 467 LRGCLEPTEIFIQE 480
               L P  I +++
Sbjct: 270 KNNLLSPAHIMVEK 283



 Score = 88.2 bits (217), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 76/263 (28%), Positives = 122/263 (46%), Gaps = 14/263 (5%)

Query: 163 AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 222
           A V   SASE  A +V  + +VF  G N S C G  D N+    P+ +E L G   K ++
Sbjct: 24  ACVFGTSASE--ALYVTDNDEVFVFGLNYSNCLGTGD-NQSTLVPKKLEGLCGKKIKSLS 80

Query: 223 AGLNFTGFLTIR-GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 281
            G      L+   G V+  G N + QLG+G T     P  +     +  VV++A G  + 
Sbjct: 81  YGSGPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPVQVCTNLLIKQVVEVACGSHHS 140

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQT---FRRKGIHVVRVSAGDEHVVAL 338
           +A+  +G V+++G  +   +G G   ++  PR +      +R    VV ++ G    +A+
Sbjct: 141 MALAADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKR----VVGIACGQTSSMAV 196

Query: 339 DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYG 398
             +G VY WG    G LG G+  ++  P  +++L S    Q+      T  L D G +Y 
Sbjct: 197 LDNGEVYGWGYNGNGQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYA 256

Query: 399 FGWMGFGSLGFPDRGVSDKVLRP 421
           +G   +G LG    G  + +L P
Sbjct: 257 WGANTYGQLG---TGNKNNLLSP 276



 Score = 83.2 bits (204), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 63/228 (27%), Positives = 97/228 (42%), Gaps = 3/228 (1%)

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
           H     + G V+  G N     G+  TN+ I   ++   L      +V  G + +  L  
Sbjct: 86  HVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPVQVCTNLLIKQVVEVACGSHHSMALAA 145

Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
            G V   G N  GQ+G G T ++PTP+ +     +  VV IA G +  +AV  NG VY +
Sbjct: 146 DGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGW 205

Query: 294 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 353
           G   N  LG G   ++L P  +       + V ++  G  H +AL   G +Y WG    G
Sbjct: 206 GYNGNGQLGLGNNGNQLTPVRVAALH--SVCVNQIVCGYAHTLALTDEGLLYAWGANTYG 263

Query: 354 ALGHGDEIDKTLPEPLSSLKSHLA-VQVCARKRKTFVLVDTGSVYGFG 400
            LG G++ +   P  +   K  +  +  C     +      G VY +G
Sbjct: 264 QLGTGNKNNLLSPAHIMVEKERVVEIAACHSAHTSAAKTQGGHVYMWG 311



 Score = 60.8 bits (146), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 56/184 (30%), Positives = 86/184 (46%), Gaps = 6/184 (3%)

Query: 114 MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +++  G +H++ L ++  VF+ G + CG +G G    Q       N      VV ++  +
Sbjct: 131 VEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQ 190

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
             +  VL +G+V+  G N +   G    N     P  V AL  V   Q+  G   T  LT
Sbjct: 191 TSSMAVLDNGEVYGWGYNGNGQLG-LGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALT 249

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY--MLAVTGNGVV 290
             G ++  G+NT+GQLG G+  +  +P  I  + E   VV+IAA  S     A T  G V
Sbjct: 250 DEGLLYAWGANTYGQLGTGNKNNLLSPAHI--MVEKERVVEIAACHSAHTSAAKTQGGHV 307

Query: 291 YSFG 294
           Y +G
Sbjct: 308 YMWG 311


>gi|157849750|gb|ABV89658.1| UVB-resistance protein UVR8 [Brassica rapa]
          Length = 537

 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 102/341 (29%), Positives = 150/341 (43%), Gaps = 36/341 (10%)

Query: 132 FSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNS 191
           ++ G +  G LGHG +  Q    T ++  S   +V+  A  NH   V   G+ F  G N 
Sbjct: 79  YTWGRNEKGQLGHG-DMIQRDRPTVVSGLSKYKIVKAGAGRNHTVVVSDEGRSFAFGWNK 137

Query: 192 SFCCGHRDTNRPIFRPRLVEALKGVPC------KQVTAGLNFTGFL--TIRGHVHTCGSN 243
               G   T +  F    VE+   VPC        +  G +FT +L  T    + T G  
Sbjct: 138 HGQLG-LGTAKNGFVSVEVESSP-VPCVVSDEVTSIACGADFTVWLSSTEGASILTAGLP 195

Query: 244 THGQLGHGDTLD--------------RPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 289
            +GQLGHG   +              +P PK+IA L    ++V++A G ++ +AV  NG 
Sbjct: 196 QYGQLGHGTDNEFNMKDGSVKLAYEAQPRPKAIASLAGE-TIVKVACGANHTVAVDKNGF 254

Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVR--VSAGDEHVVALDSSGYVYTW 347
           VY++G G    LGH EQ DE  PR I  F+R  +      VSAG  +       G +Y W
Sbjct: 255 VYTWGFGGYGRLGHREQKDEWSPRRIDVFQRNNVLPPNAIVSAGSANSACTAGGGQLYMW 314

Query: 348 GKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSL 407
           GK       +GD  D   P+P+  L       + +     FV  D+ S   +G   +G L
Sbjct: 315 GK----IKNNGD--DWMYPKPMMDLSGWNLRWMDSGSMHHFVGADS-SCISWGHAQYGEL 367

Query: 408 GFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDR 448
           G+   G       P+ +D L   HV  ++ G  H++V+ DR
Sbjct: 368 GYGPHGQKSSAA-PKKVDILEGMHVMGVACGFCHSMVIVDR 407



 Score = 65.9 bits (159), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 45/137 (32%), Positives = 63/137 (45%), Gaps = 4/137 (2%)

Query: 334 HVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDT 393
           H VALD  G  YTWG+   G LGHGD I +  P  +S L  +  V+  A +  T V+ D 
Sbjct: 68  HCVALDVEGRCYTWGRNEKGQLGHGDMIQRDRPTVVSGLSKYKIVKAGAGRNHTVVVSDE 127

Query: 394 GSVYGFGWMGFGSLGF--PDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVV--TDRG 449
           G  + FGW   G LG      G     +    +  + +  V+ I+ G   TV +  T+  
Sbjct: 128 GRSFAFGWNKHGQLGLGTAKNGFVSVEVESSPVPCVVSDEVTSIACGADFTVWLSSTEGA 187

Query: 450 RLFGFGDNERAQLGHDT 466
            +   G  +  QLGH T
Sbjct: 188 SILTAGLPQYGQLGHGT 204



 Score = 46.2 bits (108), Expect = 0.036,   Method: Compositional matrix adjust.
 Identities = 29/83 (34%), Positives = 39/83 (46%), Gaps = 3/83 (3%)

Query: 394 GSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFG 453
           G  Y +G    G LG  D    D   RP ++  L  + + +   G  HTVVV+D GR F 
Sbjct: 76  GRCYTWGRNEKGQLGHGDMIQRD---RPTVVSGLSKYKIVKAGAGRNHTVVVSDEGRSFA 132

Query: 454 FGDNERAQLGHDTLRGCLEPTEI 476
           FG N+  QLG  T +      E+
Sbjct: 133 FGWNKHGQLGLGTAKNGFVSVEV 155


>gi|222136641|ref|NP_149107.4| serine/threonine-protein kinase Nek9 [Homo sapiens]
 gi|116242675|sp|Q8TD19.2|NEK9_HUMAN RecName: Full=Serine/threonine-protein kinase Nek9; AltName:
           Full=Nercc1 kinase; AltName: Full=Never in mitosis
           A-related kinase 9; Short=NimA-related protein kinase 9;
           AltName: Full=NimA-related kinase 8; Short=Nek8
 gi|62740023|gb|AAH93881.1| NIMA (never in mitosis gene a)- related kinase 9 [Homo sapiens]
 gi|85567549|gb|AAI12102.1| NIMA related kinase 9 [Homo sapiens]
          Length = 979

 Score =  105 bits (263), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 82/275 (29%), Positives = 126/275 (45%), Gaps = 21/275 (7%)

Query: 207 PRLVEALK-GVPCKQVTAGLNFTGFLTIRGHVHTC-----GSNTHGQLGHGDTLDRPTPK 260
           P+ ++ +K G   +QV AG      +T+   ++T      G+  HGQLGHGD      PK
Sbjct: 359 PQKLDVIKSGCSARQVCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDKASYRQPK 418

Query: 261 SIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH--DELQPRAIQTF 318
            +  L+   ++ Q++ G  + + VT  G +Y+FGS    C+G  +    + L+P  +  F
Sbjct: 419 HVEKLQG-KAIRQVSCGDDFTVCVTDEGQLYAFGSDYYGCMGVDKVAGPEVLEPMQLNFF 477

Query: 319 RRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAV 378
               +   +VS GD HVV L  +  VY+WG G  G LG   E D   P+ +   K+ + V
Sbjct: 478 LSNPVE--QVSCGDNHVVVLTRNKEVYSWGCGEYGRLGLDSEEDYYTPQKVDVPKALIIV 535

Query: 379 QVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD--RGVSDKVLRPRI--------LDSLR 428
            V      TF+L  +G V   G   F  LG      G+ +      +           L 
Sbjct: 536 AVQCGCDGTFLLTQSGKVLACGLNEFNKLGLNQCMSGIINHEAYHEVPYTTSFTLAKQLS 595

Query: 429 AHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 463
            + +  I+ G  HT  + +RGRL  FG N+  QLG
Sbjct: 596 FYKIRTIAPGKTHTAAIDERGRLLTFGCNKCGQLG 630



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 76/307 (24%), Positives = 128/307 (41%), Gaps = 40/307 (13%)

Query: 115 QITTGRYHTLLISNS-SVFSCGSSLCGVLG----HGPETTQCVSFTRINFPSAAHVVQVS 169
           Q++ G   T+ +++   +++ GS   G +G     GPE  + +   ++NF  +  V QVS
Sbjct: 430 QVSCGDDFTVCVTDEGQLYAFGSDYYGCMGVDKVAGPEVLEPM---QLNFFLSNPVEQVS 486

Query: 170 ASENHAAFVLQSGQVFTCGDNSSFCCGHR-----DTNRPIFRPRLVEALKGVPCKQVTAG 224
             +NH   + ++ +V++ G      CG       D+    + P+ V+  K +    V  G
Sbjct: 487 CGDNHVVVLTRNKEVYSWG------CGEYGRLGLDSEEDYYTPQKVDVPKALIIVAVQCG 540

Query: 225 LNFTGFLTIRGHVHTCGSNTHGQLG----------HGDTLDRPTPKSIAPLEEVG--SVV 272
            + T  LT  G V  CG N   +LG          H    + P   S    +++    + 
Sbjct: 541 CDGTFLLTQSGKVLACGLNEFNKLGLNQCMSGIINHEAYHEVPYTTSFTLAKQLSFYKIR 600

Query: 273 QIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGD 332
            IA G ++  A+   G + +FG      LG G     L    +      G  V+RVS GD
Sbjct: 601 TIAPGKTHTAAIDERGRLLTFGCNKCGQLGVGNYKKRLGINLLGG-PLGGKQVIRVSCGD 659

Query: 333 EHVVALDSSGYVYTWGKGYCGALG-------HGDEIDKTLPEPLSSLKSHLAVQVCARKR 385
           E  +A     +++ WG G  G L        HG +I  + P P+     H+    C R  
Sbjct: 660 EFTIAATDDNHIFAWGNGGNGRLAMTPTERPHGSDICTSWPRPIFGSLHHVPDLSC-RGW 718

Query: 386 KTFVLVD 392
            T ++V+
Sbjct: 719 HTILIVE 725



 Score = 69.7 bits (169), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 46/164 (28%), Positives = 74/164 (45%), Gaps = 6/164 (3%)

Query: 320 RKGIHVVRVSAGDEHVVALDSSGYVYTW-----GKGYCGALGHGDEIDKTLPEPLSSLKS 374
           + G    +V AG+ H   +     +YTW     G    G LGHGD+     P+ +  L+ 
Sbjct: 366 KSGCSARQVCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDKASYRQPKHVEKLQG 425

Query: 375 HLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQ 434
               QV      T  + D G +Y FG   +G +G  D+    +VL P  L+   ++ V Q
Sbjct: 426 KAIRQVSCGDDFTVCVTDEGQLYAFGSDYYGCMGV-DKVAGPEVLEPMQLNFFLSNPVEQ 484

Query: 435 ISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFI 478
           +S G  H VV+T    ++ +G  E  +LG D+      P ++ +
Sbjct: 485 VSCGDNHVVVLTRNKEVYSWGCGEYGRLGLDSEEDYYTPQKVDV 528



 Score = 68.9 bits (167), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 81/375 (21%), Positives = 146/375 (38%), Gaps = 28/375 (7%)

Query: 98  QSVEHSSDIVETSAGNMQITTGRYHTLLIS-NSSVFSC-----GSSLCGVLGHGPETTQC 151
           +S     D++++     Q+  G  H  +++    +++      G+ L G LGHG + +  
Sbjct: 356 KSTPQKLDVIKSGCSARQVCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDKASY- 414

Query: 152 VSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRP-IFRPRLV 210
                +       + QVS  ++    V   GQ++  G +   C G      P +  P  +
Sbjct: 415 RQPKHVEKLQGKAIRQVSCGDDFTVCVTDEGQLYAFGSDYYGCMGVDKVAGPEVLEPMQL 474

Query: 211 EALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSI-APLEEVG 269
                 P +QV+ G N    LT    V++ G   +G+LG     D  TP+ +  P   + 
Sbjct: 475 NFFLSNPVEQVSCGDNHVVVLTRNKEVYSWGCGEYGRLGLDSEEDYYTPQKVDVPKALII 534

Query: 270 SVVQIAAGPSYMLAVTGNGVVYSFGS----GSNFCL----GHGEQHDELQPRAIQTFRRK 321
             VQ     +++L  +G  +          G N C+     H   H+     +    ++ 
Sbjct: 535 VAVQCGCDGTFLLTQSGKVLACGLNEFNKLGLNQCMSGIINHEAYHEVPYTTSFTLAKQL 594

Query: 322 GIHVVR-VSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLS-SLKSHLAVQ 379
             + +R ++ G  H  A+D  G + T+G   CG LG G+   +     L   L     ++
Sbjct: 595 SFYKIRTIAPGKTHTAAIDERGRLLTFGCNKCGQLGVGNYKKRLGINLLGGPLGGKQVIR 654

Query: 380 VCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD------RGVSDKVLRPRILDSLRAHHVS 433
           V      T    D   ++ +G  G G L            +     RP I  SL  HHV 
Sbjct: 655 VSCGDEFTIAATDDNHIFAWGNGGNGRLAMTPTERPHGSDICTSWPRP-IFGSL--HHVP 711

Query: 434 QISTGLYHTVVVTDR 448
            +S   +HT+++ ++
Sbjct: 712 DLSCRGWHTILIVEK 726



 Score = 66.2 bits (160), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 97/388 (25%), Positives = 156/388 (40%), Gaps = 47/388 (12%)

Query: 113 NMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           N      R  T+  +  +V +  +S   V G G  T Q +   +    S     QV A  
Sbjct: 323 NAPTKRPRSSTVTEAPIAVVTSRTSEVYVWGGGKSTPQKLDVIK----SGCSARQVCAGN 378

Query: 173 NHAAFVLQSGQVFTC-----GDNSSFCCGHRDTNRPIFR-PRLVEALKGVPCKQVTAGLN 226
            H A V    +++T      G       GH D  +  +R P+ VE L+G   +QV+ G +
Sbjct: 379 THFAVVTVEKELYTWVNMQGGTKLHGQLGHGD--KASYRQPKHVEKLQGKAIRQVSCGDD 436

Query: 227 FTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPT-PKSIAPLE----EVGSVVQIAAGPSYM 281
           FT  +T  G ++  GS+ +G +G    +D+   P+ + P++        V Q++ G +++
Sbjct: 437 FTVCVTDEGQLYAFGSDYYGCMG----VDKVAGPEVLEPMQLNFFLSNPVEQVSCGDNHV 492

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 341
           + +T N  VYS+G G    LG   + D   P+ +     K + +V V  G +    L  S
Sbjct: 493 VVLTRNKEVYSWGCGEYGRLGLDSEEDYYTPQKVDV--PKALIIVAVQCGCDGTFLLTQS 550

Query: 342 GYVYTWGKGYCGALGHGD------------EIDKTLPEPLSSLKSHLAVQVCAR-KRKTF 388
           G V   G      LG               E+  T    L+   S   ++  A  K  T 
Sbjct: 551 GKVLACGLNEFNKLGLNQCMSGIINHEAYHEVPYTTSFTLAKQLSFYKIRTIAPGKTHTA 610

Query: 389 VLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRIL-DSLRAHHVSQISTGLYHTVVVTD 447
            + + G +  FG    G LG    G   K L   +L   L    V ++S G   T+  TD
Sbjct: 611 AIDERGRLLTFGCNKCGQLGV---GNYKKRLGINLLGGPLGGKQVIRVSCGDEFTIAATD 667

Query: 448 RGRLFGFGDNERAQLGHDTLRGCLEPTE 475
              +F +G+    +L        + PTE
Sbjct: 668 DNHIFAWGNGGNGRLA-------MTPTE 688



 Score = 49.7 bits (117), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 43/147 (29%), Positives = 65/147 (44%), Gaps = 17/147 (11%)

Query: 335 VVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHL-AVQVCARKRKTFVLVDT 393
            V    +  VY WG G            K+ P+ L  +KS   A QVCA      V+   
Sbjct: 340 AVVTSRTSEVYVWGGG------------KSTPQKLDVIKSGCSARQVCAGNTHFAVVTVE 387

Query: 394 GSVYGFGWMGFGSLGFPDRGVSDKV--LRPRILDSLRAHHVSQISTGLYHTVVVTDRGRL 451
             +Y +  M  G+      G  DK    +P+ ++ L+   + Q+S G   TV VTD G+L
Sbjct: 388 KELYTWVNMQGGTKLHGQLGHGDKASYRQPKHVEKLQGKAIRQVSCGDDFTVCVTDEGQL 447

Query: 452 FGFGDNERAQLGHDTLRG--CLEPTEI 476
           + FG +    +G D + G   LEP ++
Sbjct: 448 YAFGSDYYGCMGVDKVAGPEVLEPMQL 474


>gi|335292799|ref|XP_003356800.1| PREDICTED: serine/threonine-protein kinase Nek9 [Sus scrofa]
          Length = 985

 Score =  105 bits (263), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 81/275 (29%), Positives = 126/275 (45%), Gaps = 21/275 (7%)

Query: 207 PRLVEALK-GVPCKQVTAGLNFTGFLTIRGHVHTC-----GSNTHGQLGHGDTLDRPTPK 260
           P+ ++ +K G   +QV AG      +T+   ++T      G+  HGQLGHGD      PK
Sbjct: 359 PQKLDVIKSGCSARQVCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDKASYRQPK 418

Query: 261 SIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH--DELQPRAIQTF 318
            +  L+   ++ Q++ G  + + VT  G +Y+FGS    C+G  +    + L+P  +  F
Sbjct: 419 HVEKLQG-KAIRQVSCGDDFTVCVTDEGQLYAFGSDYYGCMGVDKVAGPEVLEPMQLNFF 477

Query: 319 RRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAV 378
               +   +VS GD HVV L  +  VY+WG G  G LG   E D   P+ +   K+ + V
Sbjct: 478 SNNPVE--QVSCGDNHVVVLTRNKEVYSWGCGEYGRLGLDSEEDYYTPQKVDVPKALIIV 535

Query: 379 QVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD--RGVSDKVLRPRI--------LDSLR 428
            V      TF+L  +G V   G   F  LG      G+ +      +           L 
Sbjct: 536 AVQCGCDGTFLLTQSGKVLACGLNEFNKLGLNQCMSGIINHEAYHEVPYTTSFTLAKQLS 595

Query: 429 AHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 463
            + +  ++ G  HT  + +RGRL  FG N+  QLG
Sbjct: 596 FYKIRTVAPGKTHTAAIDERGRLLTFGCNKCGQLG 630



 Score = 71.6 bits (174), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 76/307 (24%), Positives = 128/307 (41%), Gaps = 40/307 (13%)

Query: 115 QITTGRYHTLLISNS-SVFSCGSSLCGVLG----HGPETTQCVSFTRINFPSAAHVVQVS 169
           Q++ G   T+ +++   +++ GS   G +G     GPE  + +   ++NF S   V QVS
Sbjct: 430 QVSCGDDFTVCVTDEGQLYAFGSDYYGCMGVDKVAGPEVLEPM---QLNFFSNNPVEQVS 486

Query: 170 ASENHAAFVLQSGQVFTCGDNSSFCCGHR-----DTNRPIFRPRLVEALKGVPCKQVTAG 224
             +NH   + ++ +V++ G      CG       D+    + P+ V+  K +    V  G
Sbjct: 487 CGDNHVVVLTRNKEVYSWG------CGEYGRLGLDSEEDYYTPQKVDVPKALIIVAVQCG 540

Query: 225 LNFTGFLTIRGHVHTCGSNTHGQLG----------HGDTLDRPTPKSIAPLEEVG--SVV 272
            + T  LT  G V  CG N   +LG          H    + P   S    +++    + 
Sbjct: 541 CDGTFLLTQSGKVLACGLNEFNKLGLNQCMSGIINHEAYHEVPYTTSFTLAKQLSFYKIR 600

Query: 273 QIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGD 332
            +A G ++  A+   G + +FG      LG G     L    +      G  V+RVS GD
Sbjct: 601 TVAPGKTHTAAIDERGRLLTFGCNKCGQLGVGNYKKRLGINLLGG-PLGGKQVIRVSCGD 659

Query: 333 EHVVALDSSGYVYTWGKGYCGALG-------HGDEIDKTLPEPLSSLKSHLAVQVCARKR 385
           E  +A     +++ WG G  G L        HG +I  + P P+     H+    C R  
Sbjct: 660 EFTIAATDDNHIFAWGNGGNGRLAMTPTERPHGSDICTSWPRPIFGSLHHVPDLSC-RGW 718

Query: 386 KTFVLVD 392
            T ++V+
Sbjct: 719 HTILIVE 725



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 82/375 (21%), Positives = 146/375 (38%), Gaps = 28/375 (7%)

Query: 98  QSVEHSSDIVETSAGNMQITTGRYHTLLIS-NSSVFSC-----GSSLCGVLGHGPETTQC 151
           +S     D++++     Q+  G  H  +++    +++      G+ L G LGHG + +  
Sbjct: 356 KSTPQKLDVIKSGCSARQVCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDKASY- 414

Query: 152 VSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRP-IFRPRLV 210
                +       + QVS  ++    V   GQ++  G +   C G      P +  P  +
Sbjct: 415 RQPKHVEKLQGKAIRQVSCGDDFTVCVTDEGQLYAFGSDYYGCMGVDKVAGPEVLEPMQL 474

Query: 211 EALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSI-APLEEVG 269
                 P +QV+ G N    LT    V++ G   +G+LG     D  TP+ +  P   + 
Sbjct: 475 NFFSNNPVEQVSCGDNHVVVLTRNKEVYSWGCGEYGRLGLDSEEDYYTPQKVDVPKALII 534

Query: 270 SVVQIAAGPSYMLAVTGNGVVYSFGS----GSNFCL----GHGEQHDELQPRAIQTFRRK 321
             VQ     +++L  +G  +          G N C+     H   H+     +    ++ 
Sbjct: 535 VAVQCGCDGTFLLTQSGKVLACGLNEFNKLGLNQCMSGIINHEAYHEVPYTTSFTLAKQL 594

Query: 322 GIHVVR-VSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLS-SLKSHLAVQ 379
             + +R V+ G  H  A+D  G + T+G   CG LG G+   +     L   L     ++
Sbjct: 595 SFYKIRTVAPGKTHTAAIDERGRLLTFGCNKCGQLGVGNYKKRLGINLLGGPLGGKQVIR 654

Query: 380 VCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD------RGVSDKVLRPRILDSLRAHHVS 433
           V      T    D   ++ +G  G G L            +     RP I  SL  HHV 
Sbjct: 655 VSCGDEFTIAATDDNHIFAWGNGGNGRLAMTPTERPHGSDICTSWPRP-IFGSL--HHVP 711

Query: 434 QISTGLYHTVVVTDR 448
            +S   +HT+++ ++
Sbjct: 712 DLSCRGWHTILIVEK 726



 Score = 68.6 bits (166), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 46/164 (28%), Positives = 73/164 (44%), Gaps = 6/164 (3%)

Query: 320 RKGIHVVRVSAGDEHVVALDSSGYVYTW-----GKGYCGALGHGDEIDKTLPEPLSSLKS 374
           + G    +V AG+ H   +     +YTW     G    G LGHGD+     P+ +  L+ 
Sbjct: 366 KSGCSARQVCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDKASYRQPKHVEKLQG 425

Query: 375 HLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQ 434
               QV      T  + D G +Y FG   +G +G  D+    +VL P  L+    + V Q
Sbjct: 426 KAIRQVSCGDDFTVCVTDEGQLYAFGSDYYGCMGV-DKVAGPEVLEPMQLNFFSNNPVEQ 484

Query: 435 ISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFI 478
           +S G  H VV+T    ++ +G  E  +LG D+      P ++ +
Sbjct: 485 VSCGDNHVVVLTRNKEVYSWGCGEYGRLGLDSEEDYYTPQKVDV 528



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 96/381 (25%), Positives = 155/381 (40%), Gaps = 47/381 (12%)

Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 179
           R  T+  +  +V +  +S   V G G  T Q +   +    S     QV A   H A V 
Sbjct: 330 RSSTVTETPIAVVTSRTSEVYVWGGGKSTPQKLDVIK----SGCSARQVCAGNTHFAVVT 385

Query: 180 QSGQVFTC-----GDNSSFCCGHRDTNRPIFR-PRLVEALKGVPCKQVTAGLNFTGFLTI 233
              +++T      G       GH D  +  +R P+ VE L+G   +QV+ G +FT  +T 
Sbjct: 386 VEKELYTWVNMQGGTKLHGQLGHGD--KASYRQPKHVEKLQGKAIRQVSCGDDFTVCVTD 443

Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPT-PKSIAPLE----EVGSVVQIAAGPSYMLAVTGNG 288
            G ++  GS+ +G +G    +D+   P+ + P++        V Q++ G ++++ +T N 
Sbjct: 444 EGQLYAFGSDYYGCMG----VDKVAGPEVLEPMQLNFFSNNPVEQVSCGDNHVVVLTRNK 499

Query: 289 VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 348
            VYS+G G    LG   + D   P+ +     K + +V V  G +    L  SG V   G
Sbjct: 500 EVYSWGCGEYGRLGLDSEEDYYTPQKVDV--PKALIIVAVQCGCDGTFLLTQSGKVLACG 557

Query: 349 KGYCGALGHGD------------EIDKTLPEPLSSLKSHLAVQVCAR-KRKTFVLVDTGS 395
                 LG               E+  T    L+   S   ++  A  K  T  + + G 
Sbjct: 558 LNEFNKLGLNQCMSGIINHEAYHEVPYTTSFTLAKQLSFYKIRTVAPGKTHTAAIDERGR 617

Query: 396 VYGFGWMGFGSLGFPDRGVSDKVLRPRIL-DSLRAHHVSQISTGLYHTVVVTDRGRLFGF 454
           +  FG    G LG    G   K L   +L   L    V ++S G   T+  TD   +F +
Sbjct: 618 LLTFGCNKCGQLGV---GNYKKRLGINLLGGPLGGKQVIRVSCGDEFTIAATDDNHIFAW 674

Query: 455 GDNERAQLGHDTLRGCLEPTE 475
           G+    +L        + PTE
Sbjct: 675 GNGGNGRLA-------MTPTE 688



 Score = 49.3 bits (116), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 43/147 (29%), Positives = 65/147 (44%), Gaps = 17/147 (11%)

Query: 335 VVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHL-AVQVCARKRKTFVLVDT 393
            V    +  VY WG G            K+ P+ L  +KS   A QVCA      V+   
Sbjct: 340 AVVTSRTSEVYVWGGG------------KSTPQKLDVIKSGCSARQVCAGNTHFAVVTVE 387

Query: 394 GSVYGFGWMGFGSLGFPDRGVSDKV--LRPRILDSLRAHHVSQISTGLYHTVVVTDRGRL 451
             +Y +  M  G+      G  DK    +P+ ++ L+   + Q+S G   TV VTD G+L
Sbjct: 388 KELYTWVNMQGGTKLHGQLGHGDKASYRQPKHVEKLQGKAIRQVSCGDDFTVCVTDEGQL 447

Query: 452 FGFGDNERAQLGHDTLRG--CLEPTEI 476
           + FG +    +G D + G   LEP ++
Sbjct: 448 YAFGSDYYGCMGVDKVAGPEVLEPMQL 474


>gi|345325025|ref|XP_001513851.2| PREDICTED: RCC1 and BTB domain-containing protein 1
           [Ornithorhynchus anatinus]
          Length = 531

 Score =  105 bits (263), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 76/254 (29%), Positives = 120/254 (47%), Gaps = 9/254 (3%)

Query: 230 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGSVVQIAAGPSYMLAVTGN 287
           ++T    V   G N    LG GD      PK +  L  +++ S+    +GP  +L+ T +
Sbjct: 36  YVTHSDEVFVFGVNCSNCLGTGDNQSTIVPKKLELLSGKKIKSL-SYGSGPHVLLS-TED 93

Query: 288 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 347
           G+VY++G      LG+G  +  + P  I T       V  V+ G  H +AL   G VY W
Sbjct: 94  GIVYAWGHNGYSQLGNGTTNQGIAPIQICT-NLMIKQVTEVACGSHHSMALADDGEVYAW 152

Query: 348 GKGYCGALGHGDEIDKTLPEPLSS-LKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGS 406
           G   CG +G G   ++  P  +++ L     V +   +  +  ++D G VYG+G+ G G 
Sbjct: 153 GYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVSIACGQTSSMAVLDNGEVYGWGYNGNGQ 212

Query: 407 LGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDT 466
           LG  + G     L P  + +L +  V QI  G  HT+ +TD G L+ +G N   QLG   
Sbjct: 213 LGLGNNG---NQLTPCRVAALHSVCVLQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGN 269

Query: 467 LRGCLEPTEIFIQE 480
               L P +I +++
Sbjct: 270 KSNLLSPAQIMVEK 283



 Score = 92.8 bits (229), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 74/255 (29%), Positives = 117/255 (45%), Gaps = 12/255 (4%)

Query: 171 SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
           S N A +V  S +VF  G N S C G  D N+    P+ +E L G   K ++ G      
Sbjct: 30  SANEAIYVTHSDEVFVFGVNCSNCLGTGD-NQSTIVPKKLELLSGKKIKSLSYGSGPHVL 88

Query: 231 LTIR-GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 289
           L+   G V+  G N + QLG+G T     P  I     +  V ++A G  + +A+  +G 
Sbjct: 89  LSTEDGIVYAWGHNGYSQLGNGTTNQGIAPIQICTNLMIKQVTEVACGSHHSMALADDGE 148

Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAIQT---FRRKGIHVVRVSAGDEHVVALDSSGYVYT 346
           VY++G  +   +G G   ++  PR +      +R    VV ++ G    +A+  +G VY 
Sbjct: 149 VYAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKR----VVSIACGQTSSMAVLDNGEVYG 204

Query: 347 WGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGS 406
           WG    G LG G+  ++  P  +++L S   +Q+      T  L D G +Y +G   +G 
Sbjct: 205 WGYNGNGQLGLGNNGNQLTPCRVAALHSVCVLQIVCGYAHTLALTDEGLLYAWGANTYGQ 264

Query: 407 LGFPDRGVSDKVLRP 421
           LG    G    +L P
Sbjct: 265 LG---TGNKSNLLSP 276



 Score = 88.6 bits (218), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 73/272 (26%), Positives = 115/272 (42%), Gaps = 5/272 (1%)

Query: 131 VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS-ASENHAAFVLQSGQVFTCGD 189
           VF  G +    LG G   +  V   ++   S   +  +S  S  H     + G V+  G 
Sbjct: 43  VFVFGVNCSNCLGTGDNQSTIVP-KKLELLSGKKIKSLSYGSGPHVLLSTEDGIVYAWGH 101

Query: 190 NSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLG 249
           N     G+  TN+ I   ++   L      +V  G + +  L   G V+  G N  GQ+G
Sbjct: 102 NGYSQLGNGTTNQGIAPIQICTNLMIKQVTEVACGSHHSMALADDGEVYAWGYNNCGQVG 161

Query: 250 HGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDE 309
            G T ++PTP+ +     +  VV IA G +  +AV  NG VY +G   N  LG G   ++
Sbjct: 162 SGSTANQPTPRKVTNCLHIKRVVSIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQ 221

Query: 310 LQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPL 369
           L P  +       + V+++  G  H +AL   G +Y WG    G LG G++ +   P  +
Sbjct: 222 LTPCRVAALH--SVCVLQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGNKSNLLSPAQI 279

Query: 370 SSLKSHLA-VQVCARKRKTFVLVDTGSVYGFG 400
              K  +  +  C     +      G VY +G
Sbjct: 280 MVEKERVVEIAACHSAHTSAAKTQGGHVYMWG 311



 Score = 58.9 bits (141), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 55/183 (30%), Positives = 84/183 (45%), Gaps = 6/183 (3%)

Query: 115 QITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
           ++  G +H++ L  +  V++ G + CG +G G    Q       N      VV ++  + 
Sbjct: 132 EVACGSHHSMALADDGEVYAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVSIACGQT 191

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
            +  VL +G+V+  G N +   G    N     P  V AL  V   Q+  G   T  LT 
Sbjct: 192 SSMAVLDNGEVYGWGYNGNGQLG-LGNNGNQLTPCRVAALHSVCVLQIVCGYAHTLALTD 250

Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPS--YMLAVTGNGVVY 291
            G ++  G+NT+GQLG G+  +  +P  I  + E   VV+IAA  S     A T  G VY
Sbjct: 251 EGLLYAWGANTYGQLGTGNKSNLLSPAQI--MVEKERVVEIAACHSAHTSAAKTQGGHVY 308

Query: 292 SFG 294
            +G
Sbjct: 309 MWG 311


>gi|13699242|gb|AAK38372.1|AF334406_1 CLLL7 protein [Homo sapiens]
 gi|14275565|emb|CAC40027.1| guanine nucleotide exchange factor [Homo sapiens]
 gi|21756194|dbj|BAC04833.1| unnamed protein product [Homo sapiens]
 gi|119629234|gb|EAX08829.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
           containing protein 1 [Homo sapiens]
          Length = 531

 Score =  105 bits (263), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 76/254 (29%), Positives = 122/254 (48%), Gaps = 9/254 (3%)

Query: 230 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGSVVQIAAGPSYMLAVTGN 287
           ++T    V   G N    LG GD      PK +  L  +++ S+    +GP  +L+ T +
Sbjct: 36  YVTDNDEVFVFGLNYSNCLGTGDNQSTLVPKKLEGLCGKKIKSL-SYGSGPHVLLS-TED 93

Query: 288 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 347
           GVVY++G      LG+G  +  + P  + T       VV V+ G  H +AL + G V+ W
Sbjct: 94  GVVYAWGHNGYSQLGNGTTNQGIAPVQVCT-NLLIKQVVEVACGSHHSMALAADGEVFAW 152

Query: 348 GKGYCGALGHGDEIDKTLPEPLSS-LKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGS 406
           G   CG +G G   ++  P  +++ L     V +   +  +  ++D G VYG+G+ G G 
Sbjct: 153 GYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQ 212

Query: 407 LGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDT 466
           LG  + G     L P  + +L +  V+QI  G  HT+ +TD G L+ +G N   QLG   
Sbjct: 213 LGLGNNG---NQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGN 269

Query: 467 LRGCLEPTEIFIQE 480
               L P  I +++
Sbjct: 270 KNNLLSPAHIMVEK 283



 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 75/261 (28%), Positives = 121/261 (46%), Gaps = 14/261 (5%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           V   SASE  A +V  + +VF  G N S C G  D N+    P+ +E L G   K ++ G
Sbjct: 26  VFGTSASE--ALYVTDNDEVFVFGLNYSNCLGTGD-NQSTLVPKKLEGLCGKKIKSLSYG 82

Query: 225 LNFTGFLTIR-GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
                 L+   G V+  G N + QLG+G T     P  +     +  VV++A G  + +A
Sbjct: 83  SGPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPVQVCTNLLIKQVVEVACGSHHSMA 142

Query: 284 VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQT---FRRKGIHVVRVSAGDEHVVALDS 340
           +  +G V+++G  +   +G G   ++  PR +      +R    VV ++ G    +A+  
Sbjct: 143 LAADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKR----VVGIACGQTSSMAVLD 198

Query: 341 SGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 400
           +G VY WG    G LG G+  ++  P  +++L S    Q+      T  L D G +Y +G
Sbjct: 199 NGEVYGWGYNGNGQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWG 258

Query: 401 WMGFGSLGFPDRGVSDKVLRP 421
              +G LG    G  + +L P
Sbjct: 259 ANTYGQLG---TGNKNNLLSP 276



 Score = 83.2 bits (204), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 63/228 (27%), Positives = 97/228 (42%), Gaps = 3/228 (1%)

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
           H     + G V+  G N     G+  TN+ I   ++   L      +V  G + +  L  
Sbjct: 86  HVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPVQVCTNLLIKQVVEVACGSHHSMALAA 145

Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
            G V   G N  GQ+G G T ++PTP+ +     +  VV IA G +  +AV  NG VY +
Sbjct: 146 DGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGW 205

Query: 294 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 353
           G   N  LG G   ++L P  +       + V ++  G  H +AL   G +Y WG    G
Sbjct: 206 GYNGNGQLGLGNNGNQLTPVRVAALH--SVCVNQIVCGYAHTLALTDEGLLYAWGANTYG 263

Query: 354 ALGHGDEIDKTLPEPLSSLKSHLA-VQVCARKRKTFVLVDTGSVYGFG 400
            LG G++ +   P  +   K  +  +  C     +      G VY +G
Sbjct: 264 QLGTGNKNNLLSPAHIMVEKERVVEIAACHSAHTSAAKTQGGHVYMWG 311



 Score = 60.8 bits (146), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 56/184 (30%), Positives = 86/184 (46%), Gaps = 6/184 (3%)

Query: 114 MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +++  G +H++ L ++  VF+ G + CG +G G    Q       N      VV ++  +
Sbjct: 131 VEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQ 190

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
             +  VL +G+V+  G N +   G    N     P  V AL  V   Q+  G   T  LT
Sbjct: 191 TSSMAVLDNGEVYGWGYNGNGQLG-LGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALT 249

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY--MLAVTGNGVV 290
             G ++  G+NT+GQLG G+  +  +P  I  + E   VV+IAA  S     A T  G V
Sbjct: 250 DEGLLYAWGANTYGQLGTGNKNNLLSPAHI--MVEKERVVEIAACHSAHTSAAKTQGGHV 307

Query: 291 YSFG 294
           Y +G
Sbjct: 308 YMWG 311


>gi|304318007|ref|YP_003853152.1| S-layer domain-containing protein [Thermoanaerobacterium
           thermosaccharolyticum DSM 571]
 gi|302779509|gb|ADL70068.1| S-layer domain protein [Thermoanaerobacterium thermosaccharolyticum
           DSM 571]
          Length = 479

 Score =  105 bits (263), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 78/254 (30%), Positives = 125/254 (49%), Gaps = 16/254 (6%)

Query: 116 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           I  G YHT+ + N  +V++ G + CG LG G  T + +    +     + VV ++A   H
Sbjct: 231 IAAGAYHTVALKNDGTVWAWGWNDCGQLGDGTTTNRTIP---VQVKGISDVVAIAAGMYH 287

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVP-CKQVTAGLNFTGFLTI 233
              +   G V+  GDN     G+ +T +  +    V+ +KG+   K + AG ++T  L  
Sbjct: 288 TVALKNDGTVWAWGDNEHDQLGN-ETTKEEYHSTPVQ-VKGISDVKAIAAGASYTVVLKN 345

Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
            G V   G N +G+LG G T +  TP  +  +  V +   IAAG  + + +  +G V+++
Sbjct: 346 DGTVWAWGVNEYGKLGDGTTNNSFTPVQVNGISNVKA---IAAGAYHTVVLKNDGTVWTW 402

Query: 294 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVR-VSAGDEHVVALDSSGYVYTWGKGYC 352
           G      LG+G   D   P  +     KGI  V+ ++AG  H VAL + G V+ WG  Y 
Sbjct: 403 GYNHYGELGNGTTVDSSTPVQV-----KGISDVKAIAAGACHTVALKNDGTVWAWGCNYY 457

Query: 353 GALGHGDEIDKTLP 366
           G LG+G  +D + P
Sbjct: 458 GELGNGTAVDSSTP 471



 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 74/264 (28%), Positives = 124/264 (46%), Gaps = 14/264 (5%)

Query: 218 CKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAG 277
            K + AG   T  L   G V   G N  GQLG G T +R  P  +  + +V   V IAAG
Sbjct: 228 VKAIAAGAYHTVALKNDGTVWAWGWNDCGQLGDGTTTNRTIPVQVKGISDV---VAIAAG 284

Query: 278 PSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVR-VSAGDEHVV 336
             + +A+  +G V+++G   +  LG+    +E     +Q    KGI  V+ ++AG  + V
Sbjct: 285 MYHTVALKNDGTVWAWGDNEHDQLGNETTKEEYHSTPVQV---KGISDVKAIAAGASYTV 341

Query: 337 ALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSV 396
            L + G V+ WG    G LG G   +   P  ++ + +  A+   A    T VL + G+V
Sbjct: 342 VLKNDGTVWAWGVNEYGKLGDGTTNNSFTPVQVNGISNVKAI--AAGAYHTVVLKNDGTV 399

Query: 397 YGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGD 456
           + +G+  +G LG      S   ++ + +  ++A     I+ G  HTV + + G ++ +G 
Sbjct: 400 WTWGYNHYGELGNGTTVDSSTPVQVKGISDVKA-----IAAGACHTVALKNDGTVWAWGC 454

Query: 457 NERAQLGHDTLRGCLEPTEIFIQE 480
           N   +LG+ T      P ++  Q 
Sbjct: 455 NYYGELGNGTAVDSSTPVQVKWQN 478



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 76/254 (29%), Positives = 118/254 (46%), Gaps = 30/254 (11%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGH----RDTNRPIFRPRLVEALKGVPCKQ 220
           V  ++A   H   +   G V+  G N    CG       TNR I  P  V+ +  V    
Sbjct: 228 VKAIAAGAYHTVALKNDGTVWAWGWND---CGQLGDGTTTNRTI--PVQVKGISDVVA-- 280

Query: 221 VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDR--PTPKSIAPLEEVGSVVQIAAGP 278
           + AG+  T  L   G V   G N H QLG+  T +    TP  +  + +V +   IAAG 
Sbjct: 281 IAAGMYHTVALKNDGTVWAWGDNEHDQLGNETTKEEYHSTPVQVKGISDVKA---IAAGA 337

Query: 279 SYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVR-VSAGDEHVVA 337
           SY + +  +G V+++G      LG G  ++   P  +      GI  V+ ++AG  H V 
Sbjct: 338 SYTVVLKNDGTVWAWGVNEYGKLGDGTTNNSFTPVQVN-----GISNVKAIAAGAYHTVV 392

Query: 338 LDSSGYVYTWGKGYCGALGHGDEIDKTLP---EPLSSLKSHLAVQVCARKRKTFVLVDTG 394
           L + G V+TWG  + G LG+G  +D + P   + +S +K+ +A   C     T  L + G
Sbjct: 393 LKNDGTVWTWGYNHYGELGNGTTVDSSTPVQVKGISDVKA-IAAGAC----HTVALKNDG 447

Query: 395 SVYGFGWMGFGSLG 408
           +V+ +G   +G LG
Sbjct: 448 TVWAWGCNYYGELG 461



 Score = 76.6 bits (187), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 58/208 (27%), Positives = 98/208 (47%), Gaps = 11/208 (5%)

Query: 270 SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGI-HVVRV 328
           +V  IAAG  + +A+  +G V+++G      LG G   +   P  +     KGI  VV +
Sbjct: 227 TVKAIAAGAYHTVALKNDGTVWAWGWNDCGQLGDGTTTNRTIPVQV-----KGISDVVAI 281

Query: 329 SAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTF 388
           +AG  H VAL + G V+ WG      LG+    ++    P+          + A    T 
Sbjct: 282 AAGMYHTVALKNDGTVWAWGDNEHDQLGNETTKEEYHSTPVQVKGISDVKAIAAGASYTV 341

Query: 389 VLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDR 448
           VL + G+V+ +G   +G LG    G ++    P  ++ +   +V  I+ G YHTVV+ + 
Sbjct: 342 VLKNDGTVWAWGVNEYGKLG---DGTTNNSFTPVQVNGIS--NVKAIAAGAYHTVVLKND 396

Query: 449 GRLFGFGDNERAQLGHDTLRGCLEPTEI 476
           G ++ +G N   +LG+ T      P ++
Sbjct: 397 GTVWTWGYNHYGELGNGTTVDSSTPVQV 424



 Score = 51.6 bits (122), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 29/109 (26%), Positives = 56/109 (51%), Gaps = 5/109 (4%)

Query: 380 VCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGL 439
           + A    T  L + G+V+ +GW   G LG  D   +++ +  ++        V  I+ G+
Sbjct: 231 IAAGAYHTVALKNDGTVWAWGWNDCGQLG--DGTTTNRTIPVQVKG---ISDVVAIAAGM 285

Query: 440 YHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQEMEEDTGLA 488
           YHTV + + G ++ +GDNE  QLG++T +     T + ++ + +   +A
Sbjct: 286 YHTVALKNDGTVWAWGDNEHDQLGNETTKEEYHSTPVQVKGISDVKAIA 334



 Score = 49.3 bits (116), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 46/164 (28%), Positives = 74/164 (45%), Gaps = 20/164 (12%)

Query: 100 VEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINF 159
           V+  SD+   +AG        Y  +L ++ +V++ G +  G LG G   T   SFT +  
Sbjct: 324 VKGISDVKAIAAG------ASYTVVLKNDGTVWAWGVNEYGKLGDG---TTNNSFTPVQV 374

Query: 160 PSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGH---RDTNRPIFRPRLVEALKGV 216
              ++V  ++A   H   +   G V+T G N     G+    D++ P+        +KG+
Sbjct: 375 NGISNVKAIAAGAYHTVVLKNDGTVWTWGYNHYGELGNGTTVDSSTPV-------QVKGI 427

Query: 217 P-CKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTP 259
              K + AG   T  L   G V   G N +G+LG+G  +D  TP
Sbjct: 428 SDVKAIAAGACHTVALKNDGTVWAWGCNYYGELGNGTAVDSSTP 471


>gi|225451993|ref|XP_002283479.1| PREDICTED: E3 ubiquitin-protein ligase HERC2 [Vitis vinifera]
 gi|296087299|emb|CBI33673.3| unnamed protein product [Vitis vinifera]
          Length = 395

 Score =  105 bits (263), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 99/362 (27%), Positives = 152/362 (41%), Gaps = 28/362 (7%)

Query: 129 SSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCG 188
            ++ S GS   G LG G    +      +   +A +V  V A   ++  + + G++FT G
Sbjct: 6   KAIISWGSGEDGQLGIG-NNEEKEWVCAVKALAAQNVCSVVAGSRNSLAICEDGKLFTWG 64

Query: 189 DNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQL 248
            N     GH    +    P  V+AL      Q   G      +  +G  +  G N +GQ 
Sbjct: 65  WNQRGTLGHPPETKTENIPSQVKALANAKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQC 124

Query: 249 GH----GDTLDRPTPKSIAPLEEVGS---VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCL 301
           G      D   RP  + I   +   S   V Q+AAG ++ + +T  G V+++G       
Sbjct: 125 GEEPERKDDTGRPLRRDITIPQRCASKLSVRQVAAGGTHSVVLTREGHVWTWGQ------ 178

Query: 302 GHGEQHDELQPRAIQTF----RRKGIHVVR-VSAGDEHVVALDSSGYVYTWGKGYCGALG 356
                     P  I+      R +G+  VR ++ G  H +AL   G ++ WG    G LG
Sbjct: 179 -------PWPPGDIKQISTPVRVQGLEKVRLIAVGAFHNLALLEDGILWAWGNNEYGQLG 231

Query: 357 HGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSD 416
            GD   ++ P  +  L     V + A    +  L D G VYG+G    G LGF D   S 
Sbjct: 232 TGDTQPRSQPIAVQGLSDLTLVDIAAGGWHSTALTDDGGVYGWGRGEHGRLGFGDDKSSK 291

Query: 417 KVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 476
            V  P+ +  L   ++ QIS G  H+V +T  GR+F FG  +  +LG+        P E+
Sbjct: 292 MV--PQKVQLLVEENIVQISCGGTHSVALTRDGRMFSFGRGDHGRLGYGRKVTTGHPMEV 349

Query: 477 FI 478
            I
Sbjct: 350 PI 351



 Score =  103 bits (256), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 88/303 (29%), Positives = 135/303 (44%), Gaps = 18/303 (5%)

Query: 116 ITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           +  G  ++L I  +  +F+ G +  G LGH PET      +++   + A +VQ +    H
Sbjct: 44  VVAGSRNSLAICEDGKLFTWGWNQRGTLGHPPETKTENIPSQVKALANAKIVQAAIGGWH 103

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHR-----DTNRPIFRPRLV--EALKGVPCKQVTAGLNF 227
              V   G+ +  G N    CG       DT RP+ R   +       +  +QV AG   
Sbjct: 104 CLAVDDQGRAYAWGGNEYGQCGEEPERKDDTGRPLRRDITIPQRCASKLSVRQVAAGGTH 163

Query: 228 TGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN 287
           +  LT  GHV T G         GD     TP  +  LE+   V  IA G  + LA+  +
Sbjct: 164 SVVLTREGHVWTWGQ----PWPPGDIKQISTPVRVQGLEK---VRLIAVGAFHNLALLED 216

Query: 288 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 347
           G+++++G+     LG G+     QP A+Q      + +V ++AG  H  AL   G VY W
Sbjct: 217 GILWAWGNNEYGQLGTGDTQPRSQPIAVQGLSD--LTLVDIAAGGWHSTALTDDGGVYGW 274

Query: 348 GKGYCGALGHGDEI-DKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGS 406
           G+G  G LG GD+   K +P+ +  L     VQ+      +  L   G ++ FG    G 
Sbjct: 275 GRGEHGRLGFGDDKSSKMVPQKVQLLVEENIVQISCGGTHSVALTRDGRMFSFGRGDHGR 334

Query: 407 LGF 409
           LG+
Sbjct: 335 LGY 337


>gi|344274042|ref|XP_003408827.1| PREDICTED: serine/threonine-protein kinase Nek9 [Loxodonta
           africana]
          Length = 976

 Score =  105 bits (263), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 82/275 (29%), Positives = 126/275 (45%), Gaps = 21/275 (7%)

Query: 207 PRLVEALK-GVPCKQVTAGLNFTGFLTIRGHVHTC-----GSNTHGQLGHGDTLDRPTPK 260
           P+ ++ +K G   +QV AG      +T+   ++T      G+  HGQLGHGD      PK
Sbjct: 359 PQKLDVIKSGCSARQVCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDKASYRQPK 418

Query: 261 SIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH--DELQPRAIQTF 318
            +  L+   ++ Q++ G  + + VT  G +Y+FGS    C+G  +    + L+P  +  F
Sbjct: 419 HVEKLQG-KAIHQVSCGDDFTVCVTDEGQLYAFGSDYYGCMGVDKVAGPEVLEPMQLNFF 477

Query: 319 RRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAV 378
               +   +VS GD HVV L  +  VY+WG G  G LG   E D   P+ +   K+ + V
Sbjct: 478 LSNPVE--QVSCGDNHVVVLTRNKDVYSWGCGEYGRLGLDSEEDYYTPQKVDVPKALIIV 535

Query: 379 QVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD--RGVSDKVLRPRI--------LDSLR 428
            V      TF+L  +G V   G   F  LG      G+ +      +           L 
Sbjct: 536 SVQCGCDGTFLLTQSGKVLACGLNEFNKLGLNQCMSGIINHEAYHEVPYTTSFTLAKQLS 595

Query: 429 AHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 463
            + +  I+ G  HT  + +RGRL  FG N+  QLG
Sbjct: 596 FYKIRTIAPGKTHTAAIDERGRLLTFGCNKCGQLG 630



 Score = 70.1 bits (170), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 76/307 (24%), Positives = 127/307 (41%), Gaps = 40/307 (13%)

Query: 115 QITTGRYHTLLISNS-SVFSCGSSLCGVLG----HGPETTQCVSFTRINFPSAAHVVQVS 169
           Q++ G   T+ +++   +++ GS   G +G     GPE  + +   ++NF  +  V QVS
Sbjct: 430 QVSCGDDFTVCVTDEGQLYAFGSDYYGCMGVDKVAGPEVLEPM---QLNFFLSNPVEQVS 486

Query: 170 ASENHAAFVLQSGQVFTCGDNSSFCCGHR-----DTNRPIFRPRLVEALKGVPCKQVTAG 224
             +NH   + ++  V++ G      CG       D+    + P+ V+  K +    V  G
Sbjct: 487 CGDNHVVVLTRNKDVYSWG------CGEYGRLGLDSEEDYYTPQKVDVPKALIIVSVQCG 540

Query: 225 LNFTGFLTIRGHVHTCGSNTHGQLG----------HGDTLDRPTPKSIAPLEEVG--SVV 272
            + T  LT  G V  CG N   +LG          H    + P   S    +++    + 
Sbjct: 541 CDGTFLLTQSGKVLACGLNEFNKLGLNQCMSGIINHEAYHEVPYTTSFTLAKQLSFYKIR 600

Query: 273 QIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGD 332
            IA G ++  A+   G + +FG      LG G     L    +      G  V+RVS GD
Sbjct: 601 TIAPGKTHTAAIDERGRLLTFGCNKCGQLGVGNYKKRLGINLLGG-PLGGKQVIRVSCGD 659

Query: 333 EHVVALDSSGYVYTWGKGYCGALG-------HGDEIDKTLPEPLSSLKSHLAVQVCARKR 385
           E  +A     +++ WG G  G L        HG +I  + P P+     H+    C R  
Sbjct: 660 EFTIAATDDNHIFAWGNGGNGRLAMTPTERPHGSDICTSWPRPIFGSLHHVPDLSC-RGW 718

Query: 386 KTFVLVD 392
            T ++V+
Sbjct: 719 HTILIVE 725



 Score = 68.2 bits (165), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 46/164 (28%), Positives = 74/164 (45%), Gaps = 6/164 (3%)

Query: 320 RKGIHVVRVSAGDEHVVALDSSGYVYTW-----GKGYCGALGHGDEIDKTLPEPLSSLKS 374
           + G    +V AG+ H   +     +YTW     G    G LGHGD+     P+ +  L+ 
Sbjct: 366 KSGCSARQVCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDKASYRQPKHVEKLQG 425

Query: 375 HLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQ 434
               QV      T  + D G +Y FG   +G +G  D+    +VL P  L+   ++ V Q
Sbjct: 426 KAIHQVSCGDDFTVCVTDEGQLYAFGSDYYGCMGV-DKVAGPEVLEPMQLNFFLSNPVEQ 484

Query: 435 ISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFI 478
           +S G  H VV+T    ++ +G  E  +LG D+      P ++ +
Sbjct: 485 VSCGDNHVVVLTRNKDVYSWGCGEYGRLGLDSEEDYYTPQKVDV 528



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 81/375 (21%), Positives = 146/375 (38%), Gaps = 28/375 (7%)

Query: 98  QSVEHSSDIVETSAGNMQITTGRYHTLLIS-NSSVFSC-----GSSLCGVLGHGPETTQC 151
           +S     D++++     Q+  G  H  +++    +++      G+ L G LGHG + +  
Sbjct: 356 KSTPQKLDVIKSGCSARQVCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDKASY- 414

Query: 152 VSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRP-IFRPRLV 210
                +       + QVS  ++    V   GQ++  G +   C G      P +  P  +
Sbjct: 415 RQPKHVEKLQGKAIHQVSCGDDFTVCVTDEGQLYAFGSDYYGCMGVDKVAGPEVLEPMQL 474

Query: 211 EALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSI-APLEEVG 269
                 P +QV+ G N    LT    V++ G   +G+LG     D  TP+ +  P   + 
Sbjct: 475 NFFLSNPVEQVSCGDNHVVVLTRNKDVYSWGCGEYGRLGLDSEEDYYTPQKVDVPKALII 534

Query: 270 SVVQIAAGPSYMLAVTGNGVVYSFGS----GSNFCL----GHGEQHDELQPRAIQTFRRK 321
             VQ     +++L  +G  +          G N C+     H   H+     +    ++ 
Sbjct: 535 VSVQCGCDGTFLLTQSGKVLACGLNEFNKLGLNQCMSGIINHEAYHEVPYTTSFTLAKQL 594

Query: 322 GIHVVR-VSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLS-SLKSHLAVQ 379
             + +R ++ G  H  A+D  G + T+G   CG LG G+   +     L   L     ++
Sbjct: 595 SFYKIRTIAPGKTHTAAIDERGRLLTFGCNKCGQLGVGNYKKRLGINLLGGPLGGKQVIR 654

Query: 380 VCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD------RGVSDKVLRPRILDSLRAHHVS 433
           V      T    D   ++ +G  G G L            +     RP I  SL  HHV 
Sbjct: 655 VSCGDEFTIAATDDNHIFAWGNGGNGRLAMTPTERPHGSDICTSWPRP-IFGSL--HHVP 711

Query: 434 QISTGLYHTVVVTDR 448
            +S   +HT+++ ++
Sbjct: 712 DLSCRGWHTILIVEK 726



 Score = 65.1 bits (157), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 96/381 (25%), Positives = 154/381 (40%), Gaps = 47/381 (12%)

Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 179
           R  T+  +  +V +  +S   V G G  T Q +   +    S     QV A   H A V 
Sbjct: 330 RSSTVTEAPIAVVTSRTSEVYVWGGGKSTPQKLDVIK----SGCSARQVCAGNTHFAVVT 385

Query: 180 QSGQVFTC-----GDNSSFCCGHRDTNRPIFR-PRLVEALKGVPCKQVTAGLNFTGFLTI 233
              +++T      G       GH D  +  +R P+ VE L+G    QV+ G +FT  +T 
Sbjct: 386 VEKELYTWVNMQGGTKLHGQLGHGD--KASYRQPKHVEKLQGKAIHQVSCGDDFTVCVTD 443

Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPT-PKSIAPLE----EVGSVVQIAAGPSYMLAVTGNG 288
            G ++  GS+ +G +G    +D+   P+ + P++        V Q++ G ++++ +T N 
Sbjct: 444 EGQLYAFGSDYYGCMG----VDKVAGPEVLEPMQLNFFLSNPVEQVSCGDNHVVVLTRNK 499

Query: 289 VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 348
            VYS+G G    LG   + D   P+ +     K + +V V  G +    L  SG V   G
Sbjct: 500 DVYSWGCGEYGRLGLDSEEDYYTPQKVDV--PKALIIVSVQCGCDGTFLLTQSGKVLACG 557

Query: 349 KGYCGALGHGD------------EIDKTLPEPLSSLKSHLAVQVCAR-KRKTFVLVDTGS 395
                 LG               E+  T    L+   S   ++  A  K  T  + + G 
Sbjct: 558 LNEFNKLGLNQCMSGIINHEAYHEVPYTTSFTLAKQLSFYKIRTIAPGKTHTAAIDERGR 617

Query: 396 VYGFGWMGFGSLGFPDRGVSDKVLRPRIL-DSLRAHHVSQISTGLYHTVVVTDRGRLFGF 454
           +  FG    G LG    G   K L   +L   L    V ++S G   T+  TD   +F +
Sbjct: 618 LLTFGCNKCGQLGV---GNYKKRLGINLLGGPLGGKQVIRVSCGDEFTIAATDDNHIFAW 674

Query: 455 GDNERAQLGHDTLRGCLEPTE 475
           G+    +L        + PTE
Sbjct: 675 GNGGNGRLA-------MTPTE 688



 Score = 48.9 bits (115), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 43/146 (29%), Positives = 65/146 (44%), Gaps = 17/146 (11%)

Query: 336 VALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHL-AVQVCARKRKTFVLVDTG 394
           V    +  VY WG G            K+ P+ L  +KS   A QVCA      V+    
Sbjct: 341 VVTSRTSEVYVWGGG------------KSTPQKLDVIKSGCSARQVCAGNTHFAVVTVEK 388

Query: 395 SVYGFGWMGFGSLGFPDRGVSDKV--LRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLF 452
            +Y +  M  G+      G  DK    +P+ ++ L+   + Q+S G   TV VTD G+L+
Sbjct: 389 ELYTWVNMQGGTKLHGQLGHGDKASYRQPKHVEKLQGKAIHQVSCGDDFTVCVTDEGQLY 448

Query: 453 GFGDNERAQLGHDTLRG--CLEPTEI 476
            FG +    +G D + G   LEP ++
Sbjct: 449 AFGSDYYGCMGVDKVAGPEVLEPMQL 474


>gi|348575702|ref|XP_003473627.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like [Cavia
           porcellus]
          Length = 1080

 Score =  105 bits (263), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 89/298 (29%), Positives = 141/298 (47%), Gaps = 31/298 (10%)

Query: 204 IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 263
           +  PR  +       + V  GL  T F+   G V+TCG N  GQLGH  +  R  P+ + 
Sbjct: 22  VLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKS--RKKPEQVV 79

Query: 264 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH--GEQHDELQPRAIQTFRRK 321
            L+   ++V ++ G ++ LA+   G VY++G  S+  LG    E+   +  ++I     K
Sbjct: 80  ALD-AQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRKSIFMPVDK 138

Query: 322 GIHVVRVS----------------AGDEHV-----VALDSSGYVYTWGKGYCGALGHGDE 360
            I +                    A D H+     VA+ S+  V+ WG+   G LG G +
Sbjct: 139 NIRIKECKKTASRKSWVSTLCSELAPDSHLAESGQVAV-SASEVFCWGQNKYGQLGLGID 197

Query: 361 IDK-TLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVL 419
             K T P+ + SL     +QV A    +FVL  +G+++G+G   FG LG  D   +D+ +
Sbjct: 198 CKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDE--NDRYV 255

Query: 420 RPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF 477
            P +L SLR+  +  I  G  HT  +T  G +F FG     QLGH++    + P ++F
Sbjct: 256 -PYLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVF 312



 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 101/358 (28%), Positives = 151/358 (42%), Gaps = 40/358 (11%)

Query: 135 GSSLCGVLGHGPETTQCVSFTRI-NFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSF 193
           G++  G LG G    + V   R  +F     V  V     H  FVL  G V+TCG N   
Sbjct: 5   GNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLG 64

Query: 194 CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLG---H 250
             GH  + +   +P  V AL       V+ G   T  L  +G V+  G ++ GQLG    
Sbjct: 65  QLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGS 121

Query: 251 GDTLDRPTPKSIAPLEE---VGSVVQIAAGPSYM------------LAVTGNGVVYSFGS 295
            + +  P      P+++   +    + A+  S++            LA +G   V    +
Sbjct: 122 EECIRVPRKSIFMPVDKNIRIKECKKTASRKSWVSTLCSELAPDSHLAESGQVAV---SA 178

Query: 296 GSNFCLGHGEQ---------HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYT 346
              FC G  +            +  P+ I++    GI  ++V+AG  H   L  SG ++ 
Sbjct: 179 SEVFCWGQNKYGQLGLGIDCKKQTSPQLIKSLL--GIPFMQVAAGGAHSFVLTLSGAIFG 236

Query: 347 WGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGS 406
           WG+   G LG  DE D+ +P  L SL+S   V +C  +  T  L   G V+ FG  G+G 
Sbjct: 237 WGRNKFGQLGLNDENDRYVPYLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQ 296

Query: 407 LGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHT-VVVTDRGRLFGFGDNERAQLG 463
           LG      +   + PR +  L    V+QI+ G  HT   V   GR++ FG     QLG
Sbjct: 297 LG---HNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 351



 Score = 91.7 bits (226), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 79/315 (25%), Positives = 139/315 (44%), Gaps = 33/315 (10%)

Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 179
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V VS  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVSCGEAHTLALN 100

Query: 180 QSGQVFTCGDNSSFCCGH-------RDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
             GQV+  G +S    G        R   + IF P + + ++   CK+  +  ++   L 
Sbjct: 101 DKGQVYAWGLDSDGQLGLLGSEECIRVPRKSIFMP-VDKNIRIKECKKTASRKSWVSTLC 159

Query: 233 IR-----------------GHVHTCGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQI 274
                                V   G N +GQLG G D   + +P+ I  L  +   +Q+
Sbjct: 160 SELAPDSHLAESGQVAVSASEVFCWGQNKYGQLGLGIDCKKQTSPQLIKSLLGI-PFMQV 218

Query: 275 AAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEH 334
           AAG ++   +T +G ++ +G      LG  +++D   P  +++ R + I  V +  G++H
Sbjct: 219 AAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPYLLKSLRSQKI--VYICCGEDH 276

Query: 335 VVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDT 393
             AL   G V+T+G G  G LGH     +  P  +  L   +  Q+ C R+  +  +  +
Sbjct: 277 TAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSS 336

Query: 394 GSVYGFGWMGFGSLG 408
           G +Y FG  G G LG
Sbjct: 337 GRIYSFGLGGNGQLG 351



 Score = 85.5 bits (210), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 64/202 (31%), Positives = 97/202 (48%), Gaps = 8/202 (3%)

Query: 170 ASENHAA----FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 225
           A ++H A      + + +VF  G N     G     +    P+L+++L G+P  QV AG 
Sbjct: 163 APDSHLAESGQVAVSASEVFCWGQNKYGQLGLGIDCKKQTSPQLIKSLLGIPFMQVAAGG 222

Query: 226 NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 285
             +  LT+ G +   G N  GQLG  D  DR  P  +  L     +V I  G  +  A+T
Sbjct: 223 AHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPYLLKSLRS-QKIVYICCGEDHTAALT 281

Query: 286 GNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA-LDSSGYV 344
             G V++FG+G    LGH     E+ PR +  F   G  V +++ G +H  A + SSG +
Sbjct: 282 KEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRI 339

Query: 345 YTWGKGYCGALGHGDEIDKTLP 366
           Y++G G  G LG G   ++  P
Sbjct: 340 YSFGLGGNGQLGTGSTSNRKSP 361



 Score = 71.6 bits (174), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 62/193 (32%), Positives = 90/193 (46%), Gaps = 5/193 (2%)

Query: 126 ISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVF 185
           +S S VF  G +  G LG G +  +  S   I        +QV+A   H+  +  SG +F
Sbjct: 176 VSASEVFCWGQNKYGQLGLGIDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIF 235

Query: 186 TCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTH 245
             G N     G  D N   + P L+++L+      +  G + T  LT  G V T G+  +
Sbjct: 236 GWGRNKFGQLGLNDENDR-YVPYLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGY 294

Query: 246 GQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVVYSFGSGSNFCLGH 303
           GQLGH  T     P+ +   E +GS+V QIA G  +  A V  +G +YSFG G N  LG 
Sbjct: 295 GQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGT 352

Query: 304 GEQHDELQPRAIQ 316
           G   +   P  ++
Sbjct: 353 GSTSNRKSPFTVK 365



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 45/151 (29%), Positives = 72/151 (47%), Gaps = 4/151 (2%)

Query: 114 MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           MQ+  G  H+ +++ S ++F  G +  G LG   E  + V +   +  S   +V +   E
Sbjct: 216 MQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPYLLKSLRSQ-KIVYICCGE 274

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFT-GFL 231
           +H A + + G VFT G       GH  T+  I  PR V  L G    Q+  G   T  F+
Sbjct: 275 DHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI-NPRKVFELMGSIVTQIACGRQHTSAFV 333

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSI 262
              G +++ G   +GQLG G T +R +P ++
Sbjct: 334 PSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 364



 Score = 41.6 bits (96), Expect = 0.91,   Method: Compositional matrix adjust.
 Identities = 27/71 (38%), Positives = 36/71 (50%), Gaps = 3/71 (4%)

Query: 399 FGWMGFGSLGFPDRGVSDK-VLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDN 457
           +G   FG LG    G+ ++ VL PR  D      V  +  GL HTV V D G ++  G N
Sbjct: 4   WGNASFGQLGL--GGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCN 61

Query: 458 ERAQLGHDTLR 468
           +  QLGH+  R
Sbjct: 62  DLGQLGHEKSR 72


>gi|356573964|ref|XP_003555124.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Glycine
           max]
          Length = 395

 Score =  105 bits (263), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 103/371 (27%), Positives = 158/371 (42%), Gaps = 33/371 (8%)

Query: 125 LISNSSVFSCGSSLCGVLGHGP-ETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQ 183
           + S+S + + GS   G LG G  E  + V   +   P     V V+ S N  A +   G+
Sbjct: 1   MDSHSHIIAWGSGEDGQLGIGSNEEKEWVCLVKALQPHRIRSV-VAGSRNSLA-IADDGK 58

Query: 184 VFTCGDNSSFCCGH----RDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 239
           +FT G N     GH    +  N+    P  V+AL  V   Q   G      +  +G  + 
Sbjct: 59  LFTWGWNQRATLGHPAETKSENKTENTPSQVKALSSVKIVQAAIGGWHCLAVDDQGRAYA 118

Query: 240 CGSNTHGQLGH----GDTLDRPTPKSIAPLEEVGS---VVQIAAGPSYMLAVTGNGVVYS 292
            G N +GQ G      D   RP  + I   +       V Q+AAG ++ + +T  G V++
Sbjct: 119 WGGNEYGQCGEEPERKDGTGRPLRRDIEIPQRCAPKLVVRQVAAGGTHSVVLTREGHVWT 178

Query: 293 FGSGSNFCLGHGEQHDELQPRAIQTF----RRKGIHVVR-VSAGDEHVVALDSSGYVYTW 347
           +G                 P  I+      R +G+  VR ++ G  H +AL   G ++ W
Sbjct: 179 WGQ-------------PWPPGDIKQISVPVRVQGLENVRLIAVGAFHNLALQEDGTLWAW 225

Query: 348 GKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSL 407
           G    G LG GD   ++ P  +  L     V + A    +  L D G VYG+G    G L
Sbjct: 226 GNNEYGQLGTGDTQPRSQPIRVQGLSDLTLVDIAAGGWHSTALTDEGEVYGWGRGEHGRL 285

Query: 408 GFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTL 467
           GF D   S K++ P+ +  L    + Q+S G  H+V +T  G +F FG  +  +LG+   
Sbjct: 286 GFGDSDKSSKMV-PQKVQLLAGEDIVQVSCGGTHSVALTRDGHMFSFGRGDHGRLGYGRK 344

Query: 468 RGCLEPTEIFI 478
               +P E+ I
Sbjct: 345 VTTGQPMEVPI 355


>gi|422295033|gb|EKU22332.1| phosphatidylinositide phosphatase sac1 [Nannochloropsis gaditana
           CCMP526]
          Length = 1021

 Score =  105 bits (263), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 134/496 (27%), Positives = 210/496 (42%), Gaps = 68/496 (13%)

Query: 13  LPSHLIFEILTSGRLSA------VDLAHLELTSKTFGGSHGLYPQKFRS--LVDLAASQL 64
           LPS  ++   T G+LS+      V L  +   +        + PQ F    L+      L
Sbjct: 518 LPSPFLYPPATQGKLSSFMTKVFVILVAVFSIAMVLKPEEEVLPQLFLGSLLITFLVLIL 577

Query: 65  CALHSIYAGMSRNVQIELLNRCN--GNWKRVLRFLQSVEHSSDIVETSAGNMQITTGRYH 122
            A H +   M   +Q     RC      +  LR + +V      V  S     ++    H
Sbjct: 578 MARHLVTKAMRALLQ----QRCRRLAVAQAKLRGVPAVAR----VRQSTTFSTLSATSSH 629

Query: 123 TLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINF-PSAAHV---------------- 165
           T+ + ++ VF+ G    G LGH P     ++   +   P    +                
Sbjct: 630 TI-VPSTRVFAWGQGTEGQLGHSPIQKSALTGAYVELSPRELRLDTEQDQQKIEKHNPWG 688

Query: 166 -VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
            V ++A  N++A V + G+++T GD S+   GH D+ +P++RPR VEAL+ V   +V  G
Sbjct: 689 FVDLAAGLNYSAGVTEDGKLYTWGDGSNHKLGHGDS-KPVYRPRQVEALQDVKIVKVACG 747

Query: 225 LNFTGFLTIRGHVHTCG-----SNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGP 278
              T  +   G + T G         G LGHGD  ++P PK +  L + G  V  +A G 
Sbjct: 748 DFHTAAIDEDGRLWTWGWGGSLFGGIGGLGHGDEAEQPRPKVVRSLVDYGCRVGSVACGE 807

Query: 279 SYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
            + L +T +G V + G+G    LG+G   D   P  ++ F  K  ++V V+AG    + L
Sbjct: 808 KHTLILTDDGEVLTAGNGEYGRLGNGGSSDHGVPEPVELFDEK-TNIVEVAAGHAFNLVL 866

Query: 339 DSSGYVYTWGKGYCGALGHGDEID------KTLPEPLSSLKSHLAVQVCARKRKTFVLVD 392
              G ++TWG+   G LG G  I       + +P  + +L+S   V V A    +  + +
Sbjct: 867 TQDGKIFTWGRNEQGQLGLGGGISMDVYSMEAVPLLVEALESKKVVHVAAGHSHSAAVTE 926

Query: 393 TGSVYGFGWMGFGSLGFPDRGVSDKV-LRPRILDSLRAHHVSQISTGLYHTVVVT-DRGR 450
            G +Y +G                K+ L P++        V Q+  G  HT VVT D  +
Sbjct: 927 EGELYMWGM---------------KIHLEPQVFRVGEGDKVWQVGCGGSHTAVVTEDAHQ 971

Query: 451 LFGFGDNERAQLGHDT 466
           LF FG      LGH T
Sbjct: 972 LFTFGKGSSLCLGHGT 987



 Score = 72.4 bits (176), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 79/348 (22%), Positives = 143/348 (41%), Gaps = 45/348 (12%)

Query: 121  YHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 180
            Y   +  +  +++ G      LGHG ++       ++       +V+V+  + H A + +
Sbjct: 698  YSAGVTEDGKLYTWGDGSNHKLGHG-DSKPVYRPRQVEALQDVKIVKVACGDFHTAAIDE 756

Query: 181  SGQVFTCG------DNSSFCCGHRDTNRPIFRPRLVEALKGVPCK--QVTAGLNFTGFLT 232
             G+++T G                +  +P  RP++V +L    C+   V  G   T  LT
Sbjct: 757  DGRLWTWGWGGSLFGGIGGLGHGDEAEQP--RPKVVRSLVDYGCRVGSVACGEKHTLILT 814

Query: 233  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 292
              G V T G+  +G+LG+G + D   P+ +   +E  ++V++AAG ++ L +T +G +++
Sbjct: 815  DDGEVLTAGNGEYGRLGNGGSSDHGVPEPVELFDEKTNIVEVAAGHAFNLVLTQDGKIFT 874

Query: 293  FGSGS------NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYT 346
            +G            +       E  P  ++    K   VV V+AG  H  A+   G +Y 
Sbjct: 875  WGRNEQGQLGLGGGISMDVYSMEAVPLLVEALESK--KVVHVAAGHSHSAAVTEEGELYM 932

Query: 347  WG-----KGYCGALGHGDEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFG 400
            WG     +     +G GD++                 QV C       V  D   ++ FG
Sbjct: 933  WGMKIHLEPQVFRVGEGDKV----------------WQVGCGGSHTAVVTEDAHQLFTFG 976

Query: 401  WMGFGSLGFPDRGVSDKVLRPRIL-DSLRAHHVSQISTGLYHTVVVTD 447
                  LG   R  +     P+++ D L    V +++ G  H  V+TD
Sbjct: 977  KGSSLCLGHGTRSYTP---HPKLVADGLAGRGVVKVACGHRHMAVITD 1021



 Score = 65.5 bits (158), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 58/214 (27%), Positives = 98/214 (45%), Gaps = 23/214 (10%)

Query: 290 VYSFGSGSNFCLGHGE--------QHDELQPRAI-----QTFRRKGIH----VVRVSAGD 332
           V+++G G+   LGH           + EL PR +     Q  ++   H     V ++AG 
Sbjct: 637 VFAWGQGTEGQLGHSPIQKSALTGAYVELSPRELRLDTEQDQQKIEKHNPWGFVDLAAGL 696

Query: 333 EHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVD 392
            +   +   G +YTWG G    LGHGD      P  + +L+    V+V      T  + +
Sbjct: 697 NYSAGVTEDGKLYTWGDGSNHKLGHGDSKPVYRPRQVEALQDVKIVKVACGDFHTAAIDE 756

Query: 393 TGSVYGFGWMGFGSLGFPDRGVSDKV--LRPRILDSLRAH--HVSQISTGLYHTVVVTDR 448
            G ++ +GW G    G    G  D+    RP+++ SL  +   V  ++ G  HT+++TD 
Sbjct: 757 DGRLWTWGWGGSLFGGIGGLGHGDEAEQPRPKVVRSLVDYGCRVGSVACGEKHTLILTDD 816

Query: 449 GRLFGFGDNERAQLGH--DTLRGCLEPTEIFIQE 480
           G +   G+ E  +LG+   +  G  EP E+F ++
Sbjct: 817 GEVLTAGNGEYGRLGNGGSSDHGVPEPVELFDEK 850



 Score = 62.8 bits (151), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 61/235 (25%), Positives = 99/235 (42%), Gaps = 30/235 (12%)

Query: 116  ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
            +  G  HTL++++   V + G+   G LG+G  +   V      F    ++V+V+A    
Sbjct: 803  VACGEKHTLILTDDGEVLTAGNGEYGRLGNGGSSDHGVPEPVELFDEKTNIVEVAAGHAF 862

Query: 175  AAFVLQSGQVFTCGDNSSFCCGHR-----DTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 229
               + Q G++FT G N     G       D       P LVEAL+      V AG + + 
Sbjct: 863  NLVLTQDGKIFTWGRNEQGQLGLGGGISMDVYSMEAVPLLVEALESKKVVHVAAGHSHSA 922

Query: 230  FLTIRGHVHTCGSNTHGQ-----LGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 284
             +T  G ++  G   H +     +G GD                  V Q+  G S+   V
Sbjct: 923  AVTEEGELYMWGMKIHLEPQVFRVGEGD-----------------KVWQVGCGGSHTAVV 965

Query: 285  TGNG-VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
            T +   +++FG GS+ CLGHG +     P+ +      G  VV+V+ G  H+  +
Sbjct: 966  TEDAHQLFTFGKGSSLCLGHGTRSYTPHPKLVAD-GLAGRGVVKVACGHRHMAVI 1019


>gi|57242759|ref|NP_060661.3| RCC1 and BTB domain-containing protein 1 [Homo sapiens]
 gi|114649667|ref|XP_001155108.1| PREDICTED: RCC1 and BTB domain-containing protein 1 isoform 3 [Pan
           troglodytes]
 gi|397476979|ref|XP_003809865.1| PREDICTED: RCC1 and BTB domain-containing protein 1 [Pan paniscus]
 gi|74751227|sp|Q8NDN9.1|RCBT1_HUMAN RecName: Full=RCC1 and BTB domain-containing protein 1; AltName:
           Full=Chronic lymphocytic leukemia deletion region gene 7
           protein; Short=CLL deletion region gene 7 protein;
           AltName: Full=Regulator of chromosome condensation and
           BTB domain-containing protein 1
 gi|21739270|emb|CAD38683.1| hypothetical protein [Homo sapiens]
 gi|117646918|emb|CAL37574.1| hypothetical protein [synthetic construct]
 gi|208965426|dbj|BAG72727.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
           containing protein 1 [synthetic construct]
 gi|410208766|gb|JAA01602.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
           containing protein 1 [Pan troglodytes]
 gi|410264076|gb|JAA20004.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
           containing protein 1 [Pan troglodytes]
 gi|410293802|gb|JAA25501.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
           containing protein 1 [Pan troglodytes]
 gi|410338539|gb|JAA38216.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
           containing protein 1 [Pan troglodytes]
          Length = 531

 Score =  105 bits (263), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 76/254 (29%), Positives = 122/254 (48%), Gaps = 9/254 (3%)

Query: 230 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGSVVQIAAGPSYMLAVTGN 287
           ++T    V   G N    LG GD      PK +  L  +++ S+    +GP  +L+ T +
Sbjct: 36  YVTDNDEVFVFGLNYSNCLGTGDNQSTLVPKKLEGLCGKKIKSL-SYGSGPHVLLS-TED 93

Query: 288 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 347
           GVVY++G      LG+G  +  + P  + T       VV V+ G  H +AL + G V+ W
Sbjct: 94  GVVYAWGHNGYSQLGNGTTNQGIAPVQVCT-NLLIKQVVEVACGSHHSMALAADGEVFAW 152

Query: 348 GKGYCGALGHGDEIDKTLPEPLSS-LKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGS 406
           G   CG +G G   ++  P  +++ L     V +   +  +  ++D G VYG+G+ G G 
Sbjct: 153 GYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQ 212

Query: 407 LGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDT 466
           LG  + G     L P  + +L +  V+QI  G  HT+ +TD G L+ +G N   QLG   
Sbjct: 213 LGLGNNG---NQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGN 269

Query: 467 LRGCLEPTEIFIQE 480
               L P  I +++
Sbjct: 270 KNNLLSPAHIMVEK 283



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 76/263 (28%), Positives = 122/263 (46%), Gaps = 14/263 (5%)

Query: 163 AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 222
           A V   SASE  A +V  + +VF  G N S C G  D N+    P+ +E L G   K ++
Sbjct: 24  ACVFGTSASE--ALYVTDNDEVFVFGLNYSNCLGTGD-NQSTLVPKKLEGLCGKKIKSLS 80

Query: 223 AGLNFTGFLTIR-GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 281
            G      L+   G V+  G N + QLG+G T     P  +     +  VV++A G  + 
Sbjct: 81  YGSGPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPVQVCTNLLIKQVVEVACGSHHS 140

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRV---SAGDEHVVAL 338
           +A+  +G V+++G  +   +G G   ++  PR +       +H+ RV   + G    +A+
Sbjct: 141 MALAADGEVFAWGYNNCGQVGSGSTANQPTPRKV----TNCLHIKRVVGIACGQTSSMAV 196

Query: 339 DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYG 398
             +G VY WG    G LG G+  ++  P  +++L S    Q+      T  L D G +Y 
Sbjct: 197 LDNGEVYGWGYNGNGQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYA 256

Query: 399 FGWMGFGSLGFPDRGVSDKVLRP 421
           +G   +G LG    G  + +L P
Sbjct: 257 WGANTYGQLG---TGNKNNLLSP 276



 Score = 83.2 bits (204), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 63/228 (27%), Positives = 97/228 (42%), Gaps = 3/228 (1%)

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
           H     + G V+  G N     G+  TN+ I   ++   L      +V  G + +  L  
Sbjct: 86  HVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPVQVCTNLLIKQVVEVACGSHHSMALAA 145

Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
            G V   G N  GQ+G G T ++PTP+ +     +  VV IA G +  +AV  NG VY +
Sbjct: 146 DGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGW 205

Query: 294 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 353
           G   N  LG G   ++L P  +       + V ++  G  H +AL   G +Y WG    G
Sbjct: 206 GYNGNGQLGLGNNGNQLTPVRVAALH--SVCVNQIVCGYAHTLALTDEGLLYAWGANTYG 263

Query: 354 ALGHGDEIDKTLPEPLSSLKSHLA-VQVCARKRKTFVLVDTGSVYGFG 400
            LG G++ +   P  +   K  +  +  C     +      G VY +G
Sbjct: 264 QLGTGNKNNLLSPAHIMVEKERVVEIAACHSAHTSAAKTQGGHVYMWG 311



 Score = 60.8 bits (146), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 56/184 (30%), Positives = 86/184 (46%), Gaps = 6/184 (3%)

Query: 114 MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +++  G +H++ L ++  VF+ G + CG +G G    Q       N      VV ++  +
Sbjct: 131 VEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQ 190

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
             +  VL +G+V+  G N +   G    N     P  V AL  V   Q+  G   T  LT
Sbjct: 191 TSSMAVLDNGEVYGWGYNGNGQLG-LGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALT 249

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY--MLAVTGNGVV 290
             G ++  G+NT+GQLG G+  +  +P  I  + E   VV+IAA  S     A T  G V
Sbjct: 250 DEGLLYAWGANTYGQLGTGNKNNLLSPAHI--MVEKERVVEIAACHSAHTSAAKTQGGHV 307

Query: 291 YSFG 294
           Y +G
Sbjct: 308 YMWG 311


>gi|403332050|gb|EJY65013.1| hypothetical protein OXYTRI_14837 [Oxytricha trifallax]
 gi|403356523|gb|EJY77858.1| hypothetical protein OXYTRI_00501 [Oxytricha trifallax]
          Length = 489

 Score =  105 bits (263), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 101/379 (26%), Positives = 160/379 (42%), Gaps = 50/379 (13%)

Query: 131 VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDN 190
           + S G+   G LG+G ET      + +   S   ++QV+AS + +A V   GQ++T G  
Sbjct: 99  LLSWGNGQNGQLGNGNETLSLSIPSPVQVLSDEDIIQVNASGDISAAVTSQGQIYTWGKT 158

Query: 191 SSFCCGH-----RDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTH 245
                       R TN  +  P L+ A + V   QV  G      +T  G + T G+   
Sbjct: 159 RGGSLSQQKSLSRATN--LLLPTLIVAPE-VQFVQVACGKTHLAGVTKDGKLITWGNPDQ 215

Query: 246 GQLGHGDTLDRP------TPKSIAPLE---------EVGSVVQIAAGPSYMLAVTGNGVV 290
           G+LGH   L +       +P+S A            E   ++Q + G  +   +T +G V
Sbjct: 216 GKLGHNAQLQQESKNKSYSPRSYADYNAINFVGGALESKKIIQASCGFQHTACLTQDGEV 275

Query: 291 YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKG 350
           Y++G G N  LGHG       P+ ++       ++V++  G ++  ALD  G +Y+WG  
Sbjct: 276 YTWGFGKNGALGHGNWDQVDLPKKVEGLS----NIVKIDCGMDYTFALDKDGNIYSWGSN 331

Query: 351 YCGALG--------HGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWM 402
             G LG        H   I   LP       SH+    C  +   F L D G  + +G+ 
Sbjct: 332 RYGQLGTTQSNINKHNVPIQLQLPHG----SSHVVDISCGEEHSAF-LNDKGEAFIWGYG 386

Query: 403 GFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQL 462
             G LG  ++   ++  +    + LR     ++  G  HT V+T  G+LF FG     QL
Sbjct: 387 NDGQLGHKEKTNLNQPKKLEFTEPLR-----RVVCGGGHTGVITTAGKLFLFGRGRDGQL 441

Query: 463 GHDTLRGCL-----EPTEI 476
           G   +   +     EP E+
Sbjct: 442 GRGDVNESMAAFRIEPKEV 460



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 79/313 (25%), Positives = 135/313 (43%), Gaps = 18/313 (5%)

Query: 184 VFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 243
           + + G+  +   G+ +    +  P  V+ L      QV A  + +  +T +G ++T G  
Sbjct: 99  LLSWGNGQNGQLGNGNETLSLSIPSPVQVLSDEDIIQVNASGDISAAVTSQGQIYTWGKT 158

Query: 244 THGQLGHGDTLDRPTPKSIAPLEEVGSV--VQIAAGPSYMLAVTGNGVVYSFGSGSNFCL 301
             G L    +L R T   +  L     V  VQ+A G +++  VT +G + ++G+     L
Sbjct: 159 RGGSLSQQKSLSRATNLLLPTLIVAPEVQFVQVACGKTHLAGVTKDGKLITWGNPDQGKL 218

Query: 302 GHGEQ------HDELQPRAIQTFRR--------KGIHVVRVSAGDEHVVALDSSGYVYTW 347
           GH  Q      +    PR+   +          +   +++ S G +H   L   G VYTW
Sbjct: 219 GHNAQLQQESKNKSYSPRSYADYNAINFVGGALESKKIIQASCGFQHTACLTQDGEVYTW 278

Query: 348 GKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSL 407
           G G  GALGHG+     LP+ +  L +   V++      TF L   G++Y +G   +G L
Sbjct: 279 GFGKNGALGHGNWDQVDLPKKVEGLSN--IVKIDCGMDYTFALDKDGNIYSWGSNRYGQL 336

Query: 408 GFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTL 467
           G     ++   +  ++     + HV  IS G  H+  + D+G  F +G     QLGH   
Sbjct: 337 GTTQSNINKHNVPIQLQLPHGSSHVVDISCGEEHSAFLNDKGEAFIWGYGNDGQLGHKEK 396

Query: 468 RGCLEPTEIFIQE 480
               +P ++   E
Sbjct: 397 TNLNQPKKLEFTE 409



 Score = 68.6 bits (166), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 61/211 (28%), Positives = 99/211 (46%), Gaps = 29/211 (13%)

Query: 88  GNWKRVLRFLQSVEHSSDIVETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPE 147
           GNW +V    + VE  S+IV+   G        Y   L  + +++S GS+  G LG    
Sbjct: 289 GNWDQV-DLPKKVEGLSNIVKIDCGM------DYTFALDKDGNIYSWGSNRYGQLG---- 337

Query: 148 TTQCVSFTRINFP-------SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDT 200
           TTQ  +  + N P        ++HVV +S  E H+AF+   G+ F  G  +    GH++ 
Sbjct: 338 TTQS-NINKHNVPIQLQLPHGSSHVVDISCGEEHSAFLNDKGEAFIWGYGNDGQLGHKEK 396

Query: 201 NRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLD----- 255
              + +P+ +E  +  P ++V  G   TG +T  G +   G    GQLG GD  +     
Sbjct: 397 TN-LNQPKKLEFTE--PLRRVVCGGGHTGVITTAGKLFLFGRGRDGQLGRGDVNESMAAF 453

Query: 256 RPTPKSIAPLEEV--GSVVQIAAGPSYMLAV 284
           R  PK +  + +     V++IA G ++ LA+
Sbjct: 454 RIEPKEVVNISQTLKAEVLEIALGSNHCLAI 484


>gi|405345706|ref|ZP_11022499.1| RCC1 repeat domain protein [Chondromyces apiculatus DSM 436]
 gi|397093755|gb|EJJ24452.1| RCC1 repeat domain protein [Myxococcus sp. (contaminant ex DSM
           436)]
          Length = 747

 Score =  105 bits (263), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 99/355 (27%), Positives = 160/355 (45%), Gaps = 22/355 (6%)

Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAA-HVVQVSASENHAAFV 178
           R+   L ++ + +S G ++ G LG   +TT       +     A      ++ + H   +
Sbjct: 358 RHSVALGADGTAWSWGDNVFGQLG---DTTFQPRMAPVQVTGLALGRADATSGQLHTVML 414

Query: 179 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVH 238
             +G+++  GDN+    G+  T +    P  V  L G+    V++G   T  L + G V 
Sbjct: 415 GANGRLWAWGDNNQGQLGN-GTQQNSSLPLPVN-LTGI--TSVSSGHRHTAALRLDGTVW 470

Query: 239 TCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 298
           + G+N +GQLG G   DR TP  +  L     V  IA G  + LA+  NG V+ +G    
Sbjct: 471 SWGTNQYGQLGDGTRTDRSTPVQVPGLT---GVTSIATGDYHSLALRSNGTVWGWGFNRY 527

Query: 299 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 358
             LG G   D  QP  +        ++V ++AG  H +AL S G V+ +G  + G LG+G
Sbjct: 528 GQLGDGTTVDRTQPVQVSGL----TNIVSIAAGGGHSLALRSDGTVWAFGYNFDGQLGNG 583

Query: 359 DEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKV 418
                 LP     L +   V + A K  +  L   G+V+ +G+   G LG    G +   
Sbjct: 584 TRTWTILPVQAVGLGN--VVSLAAGKMYSLALRADGTVWAWGYNASGQLGV---GTTQGS 638

Query: 419 LRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEP 473
             P  +  L A  ++ I+ G YH++ +   G ++ +G N   QLG+ T    L P
Sbjct: 639 AVPLQVSGLSA--ITSITAGTYHSLALRSDGWVWAWGFNFEGQLGNGTSDNRLTP 691



 Score =  101 bits (251), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 101/386 (26%), Positives = 167/386 (43%), Gaps = 29/386 (7%)

Query: 97  LQSVEHSSDIVETSAGN----MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQC 151
           +Q  + +++ V   AG     +++  G+YH+L + S  +VF+ G +  G LG G  TTQ 
Sbjct: 32  VQERDSATETVRQRAGARLPPVRLAVGQYHSLAVHSEGTVFAWGFNRLGQLGDG--TTQD 89

Query: 152 VSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVE 211
            +   +     A  V V+A + ++  + ++G V+  GDN+S   G   T  P  +PR V 
Sbjct: 90  KA-APVQVAGVASAVSVAAGDQYSLALDENGDVWAWGDNASGQLGD-GTLTPRAQPRRVS 147

Query: 212 AL-KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS 270
            L +GV    + +G      L   G V   G N   QLG       P P    P+  +  
Sbjct: 148 GLTQGV---SLASGFAHAVALRADGTVWAWGDNRSNQLGSATLTRSPVP---IPVPGLSD 201

Query: 271 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 330
           +V + AG S  LA+  +G V+++G      LG G       P  +         V  +SA
Sbjct: 202 IVAVVAGGSSSLALRADGTVWAWGDNRYGQLGDGTTVRRAAPVRVANLD----AVTHISA 257

Query: 331 GDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVL 390
           G  H +AL + G  + WG    G LG G  + +TLP  +   ++     V A    +  +
Sbjct: 258 GAYHALALRADGTAWAWGYNAFGQLGDGTTVQRTLPVLIGLTETR---TVVAGNYHSLAV 314

Query: 391 VDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGR 450
              G+V+ +G   +  LG  +   S   L   +   +       +  G  H+V +   G 
Sbjct: 315 RTDGAVWAWGDNRYRQLGTGNLTSSAVPLHAGMTGGV------TLVAGFRHSVALGADGT 368

Query: 451 LFGFGDNERAQLGHDTLRGCLEPTEI 476
            + +GDN   QLG  T +  + P ++
Sbjct: 369 AWSWGDNVFGQLGDTTFQPRMAPVQV 394



 Score = 95.5 bits (236), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 93/362 (25%), Positives = 158/362 (43%), Gaps = 22/362 (6%)

Query: 116 ITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 174
           +  G YH+L + ++ +V++ G +    LG G  T+  V             V + A   H
Sbjct: 304 VVAGNYHSLAVRTDGAVWAWGDNRYRQLGTGNLTSSAVPL----HAGMTGGVTLVAGFRH 359

Query: 175 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 234
           +  +   G  ++ GDN     G   T +P   P  V  L  +     T+G   T  L   
Sbjct: 360 SVALGADGTAWSWGDNVFGQLGDT-TFQPRMAPVQVTGLA-LGRADATSGQLHTVMLGAN 417

Query: 235 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 294
           G +   G N  GQLG+G   +   P    P+   G +  +++G  +  A+  +G V+S+G
Sbjct: 418 GRLWAWGDNNQGQLGNGTQQNSSLPL---PVNLTG-ITSVSSGHRHTAALRLDGTVWSWG 473

Query: 295 SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGA 354
           +     LG G + D   P  +         V  ++ GD H +AL S+G V+ WG    G 
Sbjct: 474 TNQYGQLGDGTRTDRSTPVQVPGL----TGVTSIATGDYHSLALRSNGTVWGWGFNRYGQ 529

Query: 355 LGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGV 414
           LG G  +D+T P  +S L +   V + A    +  L   G+V+ FG+   G LG    G 
Sbjct: 530 LGDGTTVDRTQPVQVSGLTN--IVSIAAGGGHSLALRSDGTVWAFGYNFDGQLG---NGT 584

Query: 415 SDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPT 474
               + P  + ++   +V  ++ G  +++ +   G ++ +G N   QLG  T +G   P 
Sbjct: 585 RTWTILP--VQAVGLGNVVSLAAGKMYSLALRADGTVWAWGYNASGQLGVGTTQGSAVPL 642

Query: 475 EI 476
           ++
Sbjct: 643 QV 644



 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 79/303 (26%), Positives = 136/303 (44%), Gaps = 20/303 (6%)

Query: 112 GNMQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSA 170
           G   +++G  HT  +  + +V+S G++  G LG G  T +    T +  P    V  ++ 
Sbjct: 449 GITSVSSGHRHTAALRLDGTVWSWGTNQYGQLGDGTRTDRS---TPVQVPGLTGVTSIAT 505

Query: 171 SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 230
            + H+  +  +G V+  G N     G   T   + R + V+         + AG   +  
Sbjct: 506 GDYHSLALRSNGTVWGWGFNRYGQLGDGTT---VDRTQPVQVSGLTNIVSIAAGGGHSLA 562

Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG--SVVQIAAGPSYMLAVTGNG 288
           L   G V   G N  GQLG+G         +I P++ VG  +VV +AAG  Y LA+  +G
Sbjct: 563 LRSDGTVWAFGYNFDGQLGNG-----TRTWTILPVQAVGLGNVVSLAAGKMYSLALRADG 617

Query: 289 VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 348
            V+++G  ++  LG G       P  +         +  ++AG  H +AL S G+V+ WG
Sbjct: 618 TVWAWGYNASGQLGVGTTQGSAVPLQVSGLS----AITSITAGTYHSLALRSDGWVWAWG 673

Query: 349 KGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLG 408
             + G LG+G   ++  P  + S+ +  A  + A    +  +   G+++ +G    G LG
Sbjct: 674 FNFEGQLGNGTSDNRLTPGLVVSMSN--ATAIFAGDLHSLAVRADGTLWAWGLNSHGQLG 731

Query: 409 FPD 411
             D
Sbjct: 732 TGD 734



 Score = 79.7 bits (195), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 73/264 (27%), Positives = 117/264 (44%), Gaps = 18/264 (6%)

Query: 112 GNMQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGP--ETTQCVSFTRINFPSAAHVVQV 168
           G   I TG YH+L L SN +V+  G +  G LG G   + TQ V  + +      ++V +
Sbjct: 499 GVTSIATGDYHSLALRSNGTVWGWGFNRYGQLGDGTTVDRTQPVQVSGLT-----NIVSI 553

Query: 169 SASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFT 228
           +A   H+  +   G V+  G N     G+      I     V+A+       + AG  ++
Sbjct: 554 AAGGGHSLALRSDGTVWAFGYNFDGQLGNGTRTWTILP---VQAVGLGNVVSLAAGKMYS 610

Query: 229 GFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG 288
             L   G V   G N  GQLG G T     P  ++ L    ++  I AG  + LA+  +G
Sbjct: 611 LALRADGTVWAWGYNASGQLGVGTTQGSAVPLQVSGLS---AITSITAGTYHSLALRSDG 667

Query: 289 VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 348
            V+++G      LG+G   + L P  + +      +   + AGD H +A+ + G ++ WG
Sbjct: 668 WVWAWGFNFEGQLGNGTSDNRLTPGLVVSMS----NATAIFAGDLHSLAVRADGTLWAWG 723

Query: 349 KGYCGALGHGDEIDKTLPEPLSSL 372
               G LG GD ++   P  +  L
Sbjct: 724 LNSHGQLGTGDTVEAWFPVQVQGL 747


>gi|344281814|ref|XP_003412672.1| PREDICTED: RCC1 and BTB domain-containing protein 1 [Loxodonta
           africana]
          Length = 531

 Score =  105 bits (263), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 84/285 (29%), Positives = 136/285 (47%), Gaps = 16/285 (5%)

Query: 203 PIF---RPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTP 259
           PIF    P+ + +++   C   T+G N   ++T    V   G N    LG GD      P
Sbjct: 8   PIFTLLSPQEIASIRKA-CVFGTSG-NEALYVTDNDEVFVFGMNYSNCLGTGDNQSTLVP 65

Query: 260 KSIAPL--EEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQT 317
           K +  L  +++ S+    + P  +L+ T +GVVY++G      LG+G  +  + P  IQ 
Sbjct: 66  KKLEALCGKKIKSL-SYGSAPHVLLS-TEDGVVYAWGHNGYSQLGNGTTNQGVAP--IQV 121

Query: 318 FRRKGI-HVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSS-LKSH 375
                I  VV V+ G  H +AL + G V+ WG   CG +G G   ++  P  +++ L   
Sbjct: 122 CTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIK 181

Query: 376 LAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQI 435
             V +   +  +  ++D G VYG+G+ G G LG  + G     L P  + +L +  V+QI
Sbjct: 182 KVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNG---NQLTPVRVAALHSVCVNQI 238

Query: 436 STGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQE 480
             G  HT+ +TD G L+ +G N   QLG       L P  + +++
Sbjct: 239 VCGYAHTLALTDEGLLYAWGANTYGQLGTGNKNNLLSPAHVLVEK 283



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 74/286 (25%), Positives = 119/286 (41%), Gaps = 5/286 (1%)

Query: 117 TTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS-ASENHA 175
           T+G     +  N  VF  G +    LG G   +  V   ++       +  +S  S  H 
Sbjct: 29  TSGNEALYVTDNDEVFVFGMNYSNCLGTGDNQSTLVP-KKLEALCGKKIKSLSYGSAPHV 87

Query: 176 AFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRG 235
               + G V+  G N     G+  TN+ +   ++   L      +V  G + +  L   G
Sbjct: 88  LLSTEDGVVYAWGHNGYSQLGNGTTNQGVAPIQVCTNLLIKQVVEVACGSHHSMALAADG 147

Query: 236 HVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 295
            V   G N  GQ+G G T ++PTP+ +     +  VV IA G +  +AV  NG VY +G 
Sbjct: 148 EVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKKVVGIACGQTSSMAVLDNGEVYGWGY 207

Query: 296 GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGAL 355
             N  LG G   ++L P  +       + V ++  G  H +AL   G +Y WG    G L
Sbjct: 208 NGNGQLGLGNNGNQLTPVRVAALH--SVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQL 265

Query: 356 GHGDEIDKTLPEPLSSLKSHLA-VQVCARKRKTFVLVDTGSVYGFG 400
           G G++ +   P  +   K  +  +  C     +     +G+VY +G
Sbjct: 266 GTGNKNNLLSPAHVLVEKERVVEIAACHSAHTSAAKTQSGNVYMWG 311


>gi|308802742|ref|XP_003078684.1| FOG: RCC1 domain (ISS) [Ostreococcus tauri]
 gi|116057137|emb|CAL51564.1| FOG: RCC1 domain (ISS) [Ostreococcus tauri]
          Length = 419

 Score =  105 bits (262), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 110/381 (28%), Positives = 167/381 (43%), Gaps = 41/381 (10%)

Query: 130 SVFSCGSSLCGVLGHGPE-TTQCVSFTRINF------PSAAHVVQVSASENHAAFVLQSG 182
           +  S G+   G LGHG   T   VSF   N+           V Q +A   H+ F+   G
Sbjct: 26  TALSAGNGDFGRLGHGQVLTDDDVSFRSSNYFHPVRGLEDVDVTQCAAGGAHSIFLAHGG 85

Query: 183 QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 242
            VF CG N+    GH   +  +    LV+    V   +V AG N T  + + G V   G 
Sbjct: 86  FVFACGLNNYGQLGHGKHSAHVPEAALVDL--DVEVVRVAAGNNHTLCVDVDGGVWAFGK 143

Query: 243 NTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLG 302
           N  GQLG G  LD   P+ I  L   G +V +A+G  + LA++ +  VYS+G+ ++  LG
Sbjct: 144 NEGGQLGTGLDLDGFQPRRIETLALEGKIVDVASGAEHSLALSEDARVYSWGTSADGVLG 203

Query: 303 HG-EQHDE----------LQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 351
           HG E  +E           +PR ++        V  ++AG  H   +D  G ++TWG+G 
Sbjct: 204 HGSETWNEGWFYRTAKTVAKPRLLRALSE--TKVRSIAAGHMHSACVDERGELFTWGQGR 261

Query: 352 CGALGHGDE-ID-KTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGF 409
              LG   + +D +T P+ + +L+     QV      T      G V  +G    G LG 
Sbjct: 262 FNQLGQTSKYVDHETAPKSVDTLR--FVHQVTCGGLHTLASTSAG-VVSWGANQHGELGH 318

Query: 410 PDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFG--------DNER-- 459
                +   +   I  S R    S++S G  H+  V++ G+LF +G         +E+  
Sbjct: 319 GSNSDAKSAIPKPIKLSSRG--WSKLSAGWKHSAGVSNDGKLFAWGFGGSVGSHSDEKLS 376

Query: 460 --AQLGHDTLRGCLEPTEIFI 478
              QLG        EPTE+++
Sbjct: 377 SGGQLGLGNDFDYWEPTEVWL 397



 Score = 77.8 bits (190), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 84/307 (27%), Positives = 140/307 (45%), Gaps = 29/307 (9%)

Query: 115 QITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
           Q   G  H++ +++   VF+CG +  G LGHG  +        ++      VV+V+A  N
Sbjct: 70  QCAAGGAHSIFLAHGGFVFACGLNNYGQLGHGKHSAHVPEAALVDLD--VEVVRVAAGNN 127

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVE--ALKGVPCKQVTAGLNFTGFL 231
           H   V   G V+  G N     G    +   F+PR +E  AL+G     V +G   +  L
Sbjct: 128 HTLCVDVDGGVWAFGKNEGGQLG-TGLDLDGFQPRRIETLALEG-KIVDVASGAEHSLAL 185

Query: 232 TIRGHVHTCGSNTHGQLGHG-DTLDR----------PTPKSIAPLEEVGSVVQIAAGPSY 280
           +    V++ G++  G LGHG +T +             P+ +  L E   V  IAAG  +
Sbjct: 186 SEDARVYSWGTSADGVLGHGSETWNEGWFYRTAKTVAKPRLLRALSET-KVRSIAAGHMH 244

Query: 281 MLAVTGNGVVYSFGSGSNFCLGHGEQH--DELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 338
              V   G ++++G G    LG   ++   E  P+++ T R     V +V+ G  H +A 
Sbjct: 245 SACVDERGELFTWGQGRFNQLGQTSKYVDHETAPKSVDTLR----FVHQVTCGGLHTLAS 300

Query: 339 DSSGYVYTWGKGYCGALGHGDEID--KTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSV 396
            S+G V +WG    G LGHG   D    +P+P+  L S    ++ A  + +  + + G +
Sbjct: 301 TSAG-VVSWGANQHGELGHGSNSDAKSAIPKPI-KLSSRGWSKLSAGWKHSAGVSNDGKL 358

Query: 397 YGFGWMG 403
           + +G+ G
Sbjct: 359 FAWGFGG 365



 Score = 60.1 bits (144), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 75/253 (29%), Positives = 114/253 (45%), Gaps = 39/253 (15%)

Query: 114 MQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTR----------INFPSA 162
           + + +G  H+L +S ++ V+S G+S  GVLGHG ET     F R          +   S 
Sbjct: 173 VDVASGAEHSLALSEDARVYSWGTSADGVLGHGSETWNEGWFYRTAKTVAKPRLLRALSE 232

Query: 163 AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPI---FRPRLVEALKGVPCK 219
             V  ++A   H+A V + G++FT G       G   T++ +     P+ V+ L+ V   
Sbjct: 233 TKVRSIAAGHMHSACVDERGELFTWGQGRFNQLGQ--TSKYVDHETAPKSVDTLRFV--H 288

Query: 220 QVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPT--PKSIAPLEEVGSVVQIAAG 277
           QVT G   T   T  G V + G+N HG+LGHG   D  +  PK I  L   G   +++AG
Sbjct: 289 QVTCGGLHTLASTSAG-VVSWGANQHGELGHGSNSDAKSAIPKPI-KLSSRG-WSKLSAG 345

Query: 278 PSYMLAVTGNGVVYSFGSG------------SNFCLGHGEQHDELQPRAIQTFRRKGIHV 325
             +   V+ +G ++++G G            S   LG G   D  +P  +          
Sbjct: 346 WKHSAGVSNDGKLFAWGFGGSVGSHSDEKLSSGGQLGLGNDFDYWEPTEVWLPGD----A 401

Query: 326 VRVSAGDEHVVAL 338
           V VS G  H +AL
Sbjct: 402 VGVSCGFNHTLAL 414



 Score = 39.3 bits (90), Expect = 5.1,   Method: Compositional matrix adjust.
 Identities = 36/141 (25%), Positives = 65/141 (46%), Gaps = 4/141 (2%)

Query: 50  PQKFRSLVDLAASQLCALHSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSS--DIV 107
           P+  R+L +     + A H   A +    + EL     G + ++ +  + V+H +    V
Sbjct: 224 PRLLRALSETKVRSIAAGHMHSACVDE--RGELFTWGQGRFNQLGQTSKYVDHETAPKSV 281

Query: 108 ETSAGNMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ 167
           +T     Q+T G  HTL  +++ V S G++  G LGHG  +    +  +    S+    +
Sbjct: 282 DTLRFVHQVTCGGLHTLASTSAGVVSWGANQHGELGHGSNSDAKSAIPKPIKLSSRGWSK 341

Query: 168 VSASENHAAFVLQSGQVFTCG 188
           +SA   H+A V   G++F  G
Sbjct: 342 LSAGWKHSAGVSNDGKLFAWG 362


>gi|395827558|ref|XP_003786967.1| PREDICTED: serine/threonine-protein kinase Nek9 [Otolemur
           garnettii]
          Length = 975

 Score =  105 bits (262), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 82/275 (29%), Positives = 126/275 (45%), Gaps = 21/275 (7%)

Query: 207 PRLVEALK-GVPCKQVTAGLNFTGFLTIRGHVHTC-----GSNTHGQLGHGDTLDRPTPK 260
           P+ ++ +K G   +QV AG      +T+   ++T      G+  HGQLGHGD      PK
Sbjct: 359 PQRLDVIKSGCSARQVCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDKASYRQPK 418

Query: 261 SIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH--DELQPRAIQTF 318
            +  L+   ++ Q++ G  + + VT  G +Y+FGS    C+G  +    + L+P  +  F
Sbjct: 419 HVEKLQG-KAIHQVSCGDDFTVCVTDEGQLYAFGSDYYGCMGVDKVAGPEVLEPMQLNFF 477

Query: 319 RRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAV 378
               +   +VS GD HVV L  +  VY+WG G  G LG   E D   P+ +   K+ + V
Sbjct: 478 LSNPVE--QVSCGDNHVVVLTRNKEVYSWGCGEYGRLGLDSEEDYYTPQKVDVPKALIIV 535

Query: 379 QVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD--RGVSDKVLRPRI--------LDSLR 428
            V      TF+L  +G V   G   F  LG      G+ +      +           L 
Sbjct: 536 AVQCGCDGTFLLTQSGKVLACGLNEFNKLGLNQCMSGIINHEAYHEVPYTTSFTLAKQLS 595

Query: 429 AHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 463
            + +  I+ G  HT  + +RGRL  FG N+  QLG
Sbjct: 596 FYKIRTIAPGKTHTAAIDERGRLLTFGCNKCGQLG 630



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 76/307 (24%), Positives = 128/307 (41%), Gaps = 40/307 (13%)

Query: 115 QITTGRYHTLLISNS-SVFSCGSSLCGVLG----HGPETTQCVSFTRINFPSAAHVVQVS 169
           Q++ G   T+ +++   +++ GS   G +G     GPE  + +   ++NF  +  V QVS
Sbjct: 430 QVSCGDDFTVCVTDEGQLYAFGSDYYGCMGVDKVAGPEVLEPM---QLNFFLSNPVEQVS 486

Query: 170 ASENHAAFVLQSGQVFTCGDNSSFCCGHR-----DTNRPIFRPRLVEALKGVPCKQVTAG 224
             +NH   + ++ +V++ G      CG       D+    + P+ V+  K +    V  G
Sbjct: 487 CGDNHVVVLTRNKEVYSWG------CGEYGRLGLDSEEDYYTPQKVDVPKALIIVAVQCG 540

Query: 225 LNFTGFLTIRGHVHTCGSNTHGQLG----------HGDTLDRPTPKSIAPLEEVG--SVV 272
            + T  LT  G V  CG N   +LG          H    + P   S    +++    + 
Sbjct: 541 CDGTFLLTQSGKVLACGLNEFNKLGLNQCMSGIINHEAYHEVPYTTSFTLAKQLSFYKIR 600

Query: 273 QIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGD 332
            IA G ++  A+   G + +FG      LG G     L    +      G  V+RVS GD
Sbjct: 601 TIAPGKTHTAAIDERGRLLTFGCNKCGQLGVGNYKKRLGINLLGG-PLGGKQVIRVSCGD 659

Query: 333 EHVVALDSSGYVYTWGKGYCGALG-------HGDEIDKTLPEPLSSLKSHLAVQVCARKR 385
           E  +A     +++ WG G  G L        HG +I  + P P+     H+    C R  
Sbjct: 660 EFTIAATDDNHIFAWGNGGNGRLAMTPTERPHGSDICTSWPRPIFGSLHHVPDLSC-RGW 718

Query: 386 KTFVLVD 392
            T ++V+
Sbjct: 719 HTILIVE 725



 Score = 68.9 bits (167), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 46/164 (28%), Positives = 74/164 (45%), Gaps = 6/164 (3%)

Query: 320 RKGIHVVRVSAGDEHVVALDSSGYVYTW-----GKGYCGALGHGDEIDKTLPEPLSSLKS 374
           + G    +V AG+ H   +     +YTW     G    G LGHGD+     P+ +  L+ 
Sbjct: 366 KSGCSARQVCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDKASYRQPKHVEKLQG 425

Query: 375 HLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQ 434
               QV      T  + D G +Y FG   +G +G  D+    +VL P  L+   ++ V Q
Sbjct: 426 KAIHQVSCGDDFTVCVTDEGQLYAFGSDYYGCMGV-DKVAGPEVLEPMQLNFFLSNPVEQ 484

Query: 435 ISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFI 478
           +S G  H VV+T    ++ +G  E  +LG D+      P ++ +
Sbjct: 485 VSCGDNHVVVLTRNKEVYSWGCGEYGRLGLDSEEDYYTPQKVDV 528



 Score = 68.6 bits (166), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 81/375 (21%), Positives = 146/375 (38%), Gaps = 28/375 (7%)

Query: 98  QSVEHSSDIVETSAGNMQITTGRYHTLLIS-NSSVFSC-----GSSLCGVLGHGPETTQC 151
           +S     D++++     Q+  G  H  +++    +++      G+ L G LGHG + +  
Sbjct: 356 KSTPQRLDVIKSGCSARQVCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDKASY- 414

Query: 152 VSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRP-IFRPRLV 210
                +       + QVS  ++    V   GQ++  G +   C G      P +  P  +
Sbjct: 415 RQPKHVEKLQGKAIHQVSCGDDFTVCVTDEGQLYAFGSDYYGCMGVDKVAGPEVLEPMQL 474

Query: 211 EALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSI-APLEEVG 269
                 P +QV+ G N    LT    V++ G   +G+LG     D  TP+ +  P   + 
Sbjct: 475 NFFLSNPVEQVSCGDNHVVVLTRNKEVYSWGCGEYGRLGLDSEEDYYTPQKVDVPKALII 534

Query: 270 SVVQIAAGPSYMLAVTGNGVVYSFGS----GSNFCL----GHGEQHDELQPRAIQTFRRK 321
             VQ     +++L  +G  +          G N C+     H   H+     +    ++ 
Sbjct: 535 VAVQCGCDGTFLLTQSGKVLACGLNEFNKLGLNQCMSGIINHEAYHEVPYTTSFTLAKQL 594

Query: 322 GIHVVR-VSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLS-SLKSHLAVQ 379
             + +R ++ G  H  A+D  G + T+G   CG LG G+   +     L   L     ++
Sbjct: 595 SFYKIRTIAPGKTHTAAIDERGRLLTFGCNKCGQLGVGNYKKRLGINLLGGPLGGKQVIR 654

Query: 380 VCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD------RGVSDKVLRPRILDSLRAHHVS 433
           V      T    D   ++ +G  G G L            +     RP I  SL  HHV 
Sbjct: 655 VSCGDEFTIAATDDNHIFAWGNGGNGRLAMTPTERPHGSDICTSWPRP-IFGSL--HHVP 711

Query: 434 QISTGLYHTVVVTDR 448
            +S   +HT+++ ++
Sbjct: 712 DLSCRGWHTILIVEK 726



 Score = 64.7 bits (156), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 97/388 (25%), Positives = 155/388 (39%), Gaps = 47/388 (12%)

Query: 113 NMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           N      R  T+  +  +V +  +S   V G G  T Q +   +    S     QV A  
Sbjct: 323 NAPTKRPRSSTVTEAPIAVVTSRTSEVYVWGGGKSTPQRLDVIK----SGCSARQVCAGN 378

Query: 173 NHAAFVLQSGQVFTC-----GDNSSFCCGHRDTNRPIFR-PRLVEALKGVPCKQVTAGLN 226
            H A V    +++T      G       GH D  +  +R P+ VE L+G    QV+ G +
Sbjct: 379 THFAVVTVEKELYTWVNMQGGTKLHGQLGHGD--KASYRQPKHVEKLQGKAIHQVSCGDD 436

Query: 227 FTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPT-PKSIAPLE----EVGSVVQIAAGPSYM 281
           FT  +T  G ++  GS+ +G +G    +D+   P+ + P++        V Q++ G +++
Sbjct: 437 FTVCVTDEGQLYAFGSDYYGCMG----VDKVAGPEVLEPMQLNFFLSNPVEQVSCGDNHV 492

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 341
           + +T N  VYS+G G    LG   + D   P+ +     K + +V V  G +    L  S
Sbjct: 493 VVLTRNKEVYSWGCGEYGRLGLDSEEDYYTPQKVDV--PKALIIVAVQCGCDGTFLLTQS 550

Query: 342 GYVYTWGKGYCGALGHGD------------EIDKTLPEPLSSLKSHLAVQVCAR-KRKTF 388
           G V   G      LG               E+  T    L+   S   ++  A  K  T 
Sbjct: 551 GKVLACGLNEFNKLGLNQCMSGIINHEAYHEVPYTTSFTLAKQLSFYKIRTIAPGKTHTA 610

Query: 389 VLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRIL-DSLRAHHVSQISTGLYHTVVVTD 447
            + + G +  FG    G LG    G   K L   +L   L    V ++S G   T+  TD
Sbjct: 611 AIDERGRLLTFGCNKCGQLGV---GNYKKRLGINLLGGPLGGKQVIRVSCGDEFTIAATD 667

Query: 448 RGRLFGFGDNERAQLGHDTLRGCLEPTE 475
              +F +G+    +L        + PTE
Sbjct: 668 DNHIFAWGNGGNGRLA-------MTPTE 688



 Score = 48.5 bits (114), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 43/146 (29%), Positives = 65/146 (44%), Gaps = 17/146 (11%)

Query: 336 VALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHL-AVQVCARKRKTFVLVDTG 394
           V    +  VY WG G            K+ P+ L  +KS   A QVCA      V+    
Sbjct: 341 VVTSRTSEVYVWGGG------------KSTPQRLDVIKSGCSARQVCAGNTHFAVVTVEK 388

Query: 395 SVYGFGWMGFGSLGFPDRGVSDKV--LRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLF 452
            +Y +  M  G+      G  DK    +P+ ++ L+   + Q+S G   TV VTD G+L+
Sbjct: 389 ELYTWVNMQGGTKLHGQLGHGDKASYRQPKHVEKLQGKAIHQVSCGDDFTVCVTDEGQLY 448

Query: 453 GFGDNERAQLGHDTLRG--CLEPTEI 476
            FG +    +G D + G   LEP ++
Sbjct: 449 AFGSDYYGCMGVDKVAGPEVLEPMQL 474


>gi|301757823|ref|XP_002914748.1| PREDICTED: serine/threonine-protein kinase Nek9-like [Ailuropoda
           melanoleuca]
 gi|281351442|gb|EFB27026.1| hypothetical protein PANDA_002683 [Ailuropoda melanoleuca]
          Length = 976

 Score =  105 bits (262), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 82/275 (29%), Positives = 126/275 (45%), Gaps = 21/275 (7%)

Query: 207 PRLVEALK-GVPCKQVTAGLNFTGFLTIRGHVHTC-----GSNTHGQLGHGDTLDRPTPK 260
           P+ ++ +K G   +QV AG      +T+   ++T      G+  HGQLGHGD      PK
Sbjct: 359 PQKLDVIKSGCSARQVCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDKASYRQPK 418

Query: 261 SIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ--HDELQPRAIQTF 318
            +  L+   ++ Q++ G  + + VT  G +Y+FGS    C+G  +    + L+P  +  F
Sbjct: 419 HVEKLQG-KAIRQVSCGDDFTVCVTDEGQLYAFGSDYYGCMGIDKVAGSEVLEPMQLNFF 477

Query: 319 RRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAV 378
               +   +VS GD HVV L  +  VY+WG G  G LG   E D   P+ +   K+ + V
Sbjct: 478 LSNPVE--QVSCGDNHVVVLTRNKEVYSWGCGEYGRLGLDSEEDYYTPQKVDVPKALIIV 535

Query: 379 QVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD--RGVSDKVLRPRI--------LDSLR 428
            V      TF+L  +G V   G   F  LG      G+ +      +           L 
Sbjct: 536 AVQCGCDGTFLLTQSGKVLACGLNEFNKLGLNQCMSGIINHEAYHEVPYTTSFTLAKQLS 595

Query: 429 AHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 463
            + +  I+ G  HT  + +RGRL  FG N+  QLG
Sbjct: 596 FYKIRTIAPGKTHTAAIDERGRLLTFGCNKCGQLG 630



 Score = 69.7 bits (169), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 46/164 (28%), Positives = 74/164 (45%), Gaps = 6/164 (3%)

Query: 320 RKGIHVVRVSAGDEHVVALDSSGYVYTW-----GKGYCGALGHGDEIDKTLPEPLSSLKS 374
           + G    +V AG+ H   +     +YTW     G    G LGHGD+     P+ +  L+ 
Sbjct: 366 KSGCSARQVCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDKASYRQPKHVEKLQG 425

Query: 375 HLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQ 434
               QV      T  + D G +Y FG   +G +G  D+    +VL P  L+   ++ V Q
Sbjct: 426 KAIRQVSCGDDFTVCVTDEGQLYAFGSDYYGCMGI-DKVAGSEVLEPMQLNFFLSNPVEQ 484

Query: 435 ISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFI 478
           +S G  H VV+T    ++ +G  E  +LG D+      P ++ +
Sbjct: 485 VSCGDNHVVVLTRNKEVYSWGCGEYGRLGLDSEEDYYTPQKVDV 528



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 73/304 (24%), Positives = 126/304 (41%), Gaps = 34/304 (11%)

Query: 115 QITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPET-TQCVSFTRINFPSAAHVVQVSASE 172
           Q++ G   T+ +++   +++ GS   G +G      ++ +   ++NF  +  V QVS  +
Sbjct: 430 QVSCGDDFTVCVTDEGQLYAFGSDYYGCMGIDKVAGSEVLEPMQLNFFLSNPVEQVSCGD 489

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHR-----DTNRPIFRPRLVEALKGVPCKQVTAGLNF 227
           NH   + ++ +V++ G      CG       D+    + P+ V+  K +    V  G + 
Sbjct: 490 NHVVVLTRNKEVYSWG------CGEYGRLGLDSEEDYYTPQKVDVPKALIIVAVQCGCDG 543

Query: 228 TGFLTIRGHVHTCGSNTHGQLG----------HGDTLDRPTPKSIAPLEEVG--SVVQIA 275
           T  LT  G V  CG N   +LG          H    + P   S    +++    +  IA
Sbjct: 544 TFLLTQSGKVLACGLNEFNKLGLNQCMSGIINHEAYHEVPYTTSFTLAKQLSFYKIRTIA 603

Query: 276 AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHV 335
            G ++  A+   G + +FG      LG G     L    +      G  V+RVS GDE  
Sbjct: 604 PGKTHTAAIDERGRLLTFGCNKCGQLGVGNYKKRLGINLLGG-PLGGKQVIRVSCGDEFT 662

Query: 336 VALDSSGYVYTWGKGYCGALG-------HGDEIDKTLPEPLSSLKSHLAVQVCARKRKTF 388
           +A     +++ WG G  G L        HG +I  + P P+     H+    C R   T 
Sbjct: 663 IAATDDNHIFAWGNGGNGRLAMTPTERPHGSDICTSWPRPIFGSLHHVPDLSC-RGWHTI 721

Query: 389 VLVD 392
           ++V+
Sbjct: 722 LIVE 725



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 80/375 (21%), Positives = 146/375 (38%), Gaps = 28/375 (7%)

Query: 98  QSVEHSSDIVETSAGNMQITTGRYHTLLIS-NSSVFSC-----GSSLCGVLGHGPETTQC 151
           +S     D++++     Q+  G  H  +++    +++      G+ L G LGHG + +  
Sbjct: 356 KSTPQKLDVIKSGCSARQVCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDKASY- 414

Query: 152 VSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCG-HRDTNRPIFRPRLV 210
                +       + QVS  ++    V   GQ++  G +   C G  +     +  P  +
Sbjct: 415 RQPKHVEKLQGKAIRQVSCGDDFTVCVTDEGQLYAFGSDYYGCMGIDKVAGSEVLEPMQL 474

Query: 211 EALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSI-APLEEVG 269
                 P +QV+ G N    LT    V++ G   +G+LG     D  TP+ +  P   + 
Sbjct: 475 NFFLSNPVEQVSCGDNHVVVLTRNKEVYSWGCGEYGRLGLDSEEDYYTPQKVDVPKALII 534

Query: 270 SVVQIAAGPSYMLAVTGNGVVYSFGS----GSNFCL----GHGEQHDELQPRAIQTFRRK 321
             VQ     +++L  +G  +          G N C+     H   H+     +    ++ 
Sbjct: 535 VAVQCGCDGTFLLTQSGKVLACGLNEFNKLGLNQCMSGIINHEAYHEVPYTTSFTLAKQL 594

Query: 322 GIHVVR-VSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLS-SLKSHLAVQ 379
             + +R ++ G  H  A+D  G + T+G   CG LG G+   +     L   L     ++
Sbjct: 595 SFYKIRTIAPGKTHTAAIDERGRLLTFGCNKCGQLGVGNYKKRLGINLLGGPLGGKQVIR 654

Query: 380 VCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD------RGVSDKVLRPRILDSLRAHHVS 433
           V      T    D   ++ +G  G G L            +     RP I  SL  HHV 
Sbjct: 655 VSCGDEFTIAATDDNHIFAWGNGGNGRLAMTPTERPHGSDICTSWPRP-IFGSL--HHVP 711

Query: 434 QISTGLYHTVVVTDR 448
            +S   +HT+++ ++
Sbjct: 712 DLSCRGWHTILIVEK 726



 Score = 63.2 bits (152), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 96/388 (24%), Positives = 155/388 (39%), Gaps = 47/388 (12%)

Query: 113 NMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           N      R  T+  +  +V +  +S   V G G  T Q +   +    S     QV A  
Sbjct: 323 NAPTKRPRSSTVTEAPIAVVTSRTSEVYVWGGGKSTPQKLDVIK----SGCSARQVCAGN 378

Query: 173 NHAAFVLQSGQVFTC-----GDNSSFCCGHRDTNRPIFR-PRLVEALKGVPCKQVTAGLN 226
            H A V    +++T      G       GH D  +  +R P+ VE L+G   +QV+ G +
Sbjct: 379 THFAVVTVEKELYTWVNMQGGTKLHGQLGHGD--KASYRQPKHVEKLQGKAIRQVSCGDD 436

Query: 227 FTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPT-PKSIAPLE----EVGSVVQIAAGPSYM 281
           FT  +T  G ++  GS+ +G +G    +D+    + + P++        V Q++ G +++
Sbjct: 437 FTVCVTDEGQLYAFGSDYYGCMG----IDKVAGSEVLEPMQLNFFLSNPVEQVSCGDNHV 492

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 341
           + +T N  VYS+G G    LG   + D   P+ +     K + +V V  G +    L  S
Sbjct: 493 VVLTRNKEVYSWGCGEYGRLGLDSEEDYYTPQKVDV--PKALIIVAVQCGCDGTFLLTQS 550

Query: 342 GYVYTWGKGYCGALGHGD------------EIDKTLPEPLSSLKSHLAVQVCAR-KRKTF 388
           G V   G      LG               E+  T    L+   S   ++  A  K  T 
Sbjct: 551 GKVLACGLNEFNKLGLNQCMSGIINHEAYHEVPYTTSFTLAKQLSFYKIRTIAPGKTHTA 610

Query: 389 VLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRIL-DSLRAHHVSQISTGLYHTVVVTD 447
            + + G +  FG    G LG    G   K L   +L   L    V ++S G   T+  TD
Sbjct: 611 AIDERGRLLTFGCNKCGQLGV---GNYKKRLGINLLGGPLGGKQVIRVSCGDEFTIAATD 667

Query: 448 RGRLFGFGDNERAQLGHDTLRGCLEPTE 475
              +F +G+    +L        + PTE
Sbjct: 668 DNHIFAWGNGGNGRLA-------MTPTE 688



 Score = 49.3 bits (116), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 43/147 (29%), Positives = 65/147 (44%), Gaps = 17/147 (11%)

Query: 335 VVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHL-AVQVCARKRKTFVLVDT 393
            V    +  VY WG G            K+ P+ L  +KS   A QVCA      V+   
Sbjct: 340 AVVTSRTSEVYVWGGG------------KSTPQKLDVIKSGCSARQVCAGNTHFAVVTVE 387

Query: 394 GSVYGFGWMGFGSLGFPDRGVSDKV--LRPRILDSLRAHHVSQISTGLYHTVVVTDRGRL 451
             +Y +  M  G+      G  DK    +P+ ++ L+   + Q+S G   TV VTD G+L
Sbjct: 388 KELYTWVNMQGGTKLHGQLGHGDKASYRQPKHVEKLQGKAIRQVSCGDDFTVCVTDEGQL 447

Query: 452 FGFGDNERAQLGHDTLRG--CLEPTEI 476
           + FG +    +G D + G   LEP ++
Sbjct: 448 YAFGSDYYGCMGIDKVAGSEVLEPMQL 474


>gi|224043366|ref|XP_002198142.1| PREDICTED: RCC1 and BTB domain-containing protein 1 [Taeniopygia
           guttata]
          Length = 537

 Score =  105 bits (262), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 77/256 (30%), Positives = 124/256 (48%), Gaps = 13/256 (5%)

Query: 230 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGSVVQIAAGPSYMLAVTGN 287
           ++T    V   G N    LG GD      PK +  L  +++ S+    +GP  +L  T +
Sbjct: 42  YITHSDEVFVFGLNCSNCLGTGDNQSTIVPKKLEALCGKKISSL-SYGSGPHVVLC-TED 99

Query: 288 GVVYSFGSGSNFCLGHGEQHDELQPRAIQT--FRRKGIHVVRVSAGDEHVVALDSSGYVY 345
           G VY++G      LG+G  +  + P  + T    +K   VV V+ G  H +AL   G +Y
Sbjct: 100 GEVYAWGHNGYSQLGNGTTNQGITPVQVCTNLLIKK---VVEVACGSHHSMALSMDGDLY 156

Query: 346 TWGKGYCGALGHGDEIDKTLPEPLSS-LKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGF 404
            WG   CG +G G   ++  P  +S+ L+  + V +   +  +  +V+ G VYG+G+ G 
Sbjct: 157 AWGYNNCGQVGSGSTANQPTPRRVSNCLQGKIVVGIACGQTSSMAVVNNGEVYGWGYNGN 216

Query: 405 GSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 464
           G LG  + G     L P  + +L +  V QI+ G  HT+ +TD G L+ +G N   QLG 
Sbjct: 217 GQLGLGNNG---NQLTPCRVAALHSVCVLQIACGYAHTLALTDEGLLYAWGANTYGQLGT 273

Query: 465 DTLRGCLEPTEIFIQE 480
                 L P +I +++
Sbjct: 274 GNKSNQLSPVQIMMEK 289



 Score = 94.7 bits (234), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 70/239 (29%), Positives = 116/239 (48%), Gaps = 3/239 (1%)

Query: 171 SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN-FTG 229
           S N A ++  S +VF  G N S C G  D N+    P+ +EAL G     ++ G      
Sbjct: 36  SANEAIYITHSDEVFVFGLNCSNCLGTGD-NQSTIVPKKLEALCGKKISSLSYGSGPHVV 94

Query: 230 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 289
             T  G V+  G N + QLG+G T    TP  +     +  VV++A G  + +A++ +G 
Sbjct: 95  LCTEDGEVYAWGHNGYSQLGNGTTNQGITPVQVCTNLLIKKVVEVACGSHHSMALSMDGD 154

Query: 290 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 349
           +Y++G  +   +G G   ++  PR +    +  I VV ++ G    +A+ ++G VY WG 
Sbjct: 155 LYAWGYNNCGQVGSGSTANQPTPRRVSNCLQGKI-VVGIACGQTSSMAVVNNGEVYGWGY 213

Query: 350 GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLG 408
              G LG G+  ++  P  +++L S   +Q+      T  L D G +Y +G   +G LG
Sbjct: 214 NGNGQLGLGNNGNQLTPCRVAALHSVCVLQIACGYAHTLALTDEGLLYAWGANTYGQLG 272



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 65/238 (27%), Positives = 110/238 (46%), Gaps = 3/238 (1%)

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
           H     + G+V+  G N     G+  TN+ I   ++   L      +V  G + +  L++
Sbjct: 92  HVVLCTEDGEVYAWGHNGYSQLGNGTTNQGITPVQVCTNLLIKKVVEVACGSHHSMALSM 151

Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
            G ++  G N  GQ+G G T ++PTP+ ++   +   VV IA G +  +AV  NG VY +
Sbjct: 152 DGDLYAWGYNNCGQVGSGSTANQPTPRRVSNCLQGKIVVGIACGQTSSMAVVNNGEVYGW 211

Query: 294 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 353
           G   N  LG G   ++L P  +       + V++++ G  H +AL   G +Y WG    G
Sbjct: 212 GYNGNGQLGLGNNGNQLTPCRVAALH--SVCVLQIACGYAHTLALTDEGLLYAWGANTYG 269

Query: 354 ALGHGDEIDKTLPEPLSSLKSHLA-VQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFP 410
            LG G++ ++  P  +   K  +  +  C     +     +G VY +G     S+ FP
Sbjct: 270 QLGTGNKSNQLSPVQIMMEKERVVEIAACHSAHTSAAKTQSGQVYMWGQCRGQSVTFP 327



 Score = 72.4 bits (176), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 54/186 (29%), Positives = 93/186 (50%), Gaps = 4/186 (2%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDT-NRPIFRPRLVEALKGVPCKQVTA 223
           VV+V+   +H+  +   G ++  G N+    G   T N+P  R R+   L+G     +  
Sbjct: 136 VVEVACGSHHSMALSMDGDLYAWGYNNCGQVGSGSTANQPTPR-RVSNCLQGKIVVGIAC 194

Query: 224 GLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
           G   +  +   G V+  G N +GQLG G+  ++ TP  +A L  V  V+QIA G ++ LA
Sbjct: 195 GQTSSMAVVNNGEVYGWGYNGNGQLGLGNNGNQLTPCRVAALHSV-CVLQIACGYAHTLA 253

Query: 284 VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 343
           +T  G++Y++G+ +   LG G + ++L P  I   + + + +    +      A   SG 
Sbjct: 254 LTDEGLLYAWGANTYGQLGTGNKSNQLSPVQIMMEKERVVEIAACHSAHTS-AAKTQSGQ 312

Query: 344 VYTWGK 349
           VY WG+
Sbjct: 313 VYMWGQ 318


>gi|19697884|gb|AAL87410.1| NIMA-family kinase NERCC1 [Homo sapiens]
          Length = 979

 Score =  105 bits (262), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 82/275 (29%), Positives = 126/275 (45%), Gaps = 21/275 (7%)

Query: 207 PRLVEALK-GVPCKQVTAGLNFTGFLTIRGHVHTC-----GSNTHGQLGHGDTLDRPTPK 260
           P+ ++ +K G   +QV AG      +T+   ++T      G+  HGQLGHGD      PK
Sbjct: 359 PQKLDVIKSGCSARQVCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDKASYRQPK 418

Query: 261 SIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH--DELQPRAIQTF 318
            +  L+   ++ Q++ G  + + VT  G +Y+FGS    C+G  +    + L+P  +  F
Sbjct: 419 HVEKLQG-KAIHQVSCGDDFTVCVTDEGQLYAFGSDYYGCMGVDKVAGPEVLEPMQLNFF 477

Query: 319 RRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAV 378
               +   +VS GD HVV L  +  VY+WG G  G LG   E D   P+ +   K+ + V
Sbjct: 478 LSNPVE--QVSCGDNHVVVLTRNKEVYSWGCGEYGRLGLDSEEDYYTPQKVDVPKALIIV 535

Query: 379 QVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD--RGVSDKVLRPRI--------LDSLR 428
            V      TF+L  +G V   G   F  LG      G+ +      +           L 
Sbjct: 536 AVQCGCDGTFLLTQSGKVLACGLNEFNKLGLNQCMSGIINHEAYHEVPYTTSFTLAKQLS 595

Query: 429 AHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 463
            + +  I+ G  HT  + +RGRL  FG N+  QLG
Sbjct: 596 FYKIRTIAPGKTHTAAIDERGRLLTFGCNKCGQLG 630



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 76/307 (24%), Positives = 128/307 (41%), Gaps = 40/307 (13%)

Query: 115 QITTGRYHTLLISNS-SVFSCGSSLCGVLG----HGPETTQCVSFTRINFPSAAHVVQVS 169
           Q++ G   T+ +++   +++ GS   G +G     GPE  + +   ++NF  +  V QVS
Sbjct: 430 QVSCGDDFTVCVTDEGQLYAFGSDYYGCMGVDKVAGPEVLEPM---QLNFFLSNPVEQVS 486

Query: 170 ASENHAAFVLQSGQVFTCGDNSSFCCGHR-----DTNRPIFRPRLVEALKGVPCKQVTAG 224
             +NH   + ++ +V++ G      CG       D+    + P+ V+  K +    V  G
Sbjct: 487 CGDNHVVVLTRNKEVYSWG------CGEYGRLGLDSEEDYYTPQKVDVPKALIIVAVQCG 540

Query: 225 LNFTGFLTIRGHVHTCGSNTHGQLG----------HGDTLDRPTPKSIAPLEEVG--SVV 272
            + T  LT  G V  CG N   +LG          H    + P   S    +++    + 
Sbjct: 541 CDGTFLLTQSGKVLACGLNEFNKLGLNQCMSGIINHEAYHEVPYTTSFTLAKQLSFYKIR 600

Query: 273 QIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGD 332
            IA G ++  A+   G + +FG      LG G     L    +      G  V+RVS GD
Sbjct: 601 TIAPGKTHTAAIDERGRLLTFGCNKCGQLGVGNYKKRLGINLLGG-PLGGKQVIRVSCGD 659

Query: 333 EHVVALDSSGYVYTWGKGYCGALG-------HGDEIDKTLPEPLSSLKSHLAVQVCARKR 385
           E  +A     +++ WG G  G L        HG +I  + P P+     H+    C R  
Sbjct: 660 EFTIAATDDNHIFAWGNGGNGRLAMTPTERPHGSDICTSWPRPIFGSLHHVPDLSC-RGW 718

Query: 386 KTFVLVD 392
            T ++V+
Sbjct: 719 HTILIVE 725



 Score = 69.3 bits (168), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 46/164 (28%), Positives = 74/164 (45%), Gaps = 6/164 (3%)

Query: 320 RKGIHVVRVSAGDEHVVALDSSGYVYTW-----GKGYCGALGHGDEIDKTLPEPLSSLKS 374
           + G    +V AG+ H   +     +YTW     G    G LGHGD+     P+ +  L+ 
Sbjct: 366 KSGCSARQVCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDKASYRQPKHVEKLQG 425

Query: 375 HLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQ 434
               QV      T  + D G +Y FG   +G +G  D+    +VL P  L+   ++ V Q
Sbjct: 426 KAIHQVSCGDDFTVCVTDEGQLYAFGSDYYGCMGV-DKVAGPEVLEPMQLNFFLSNPVEQ 484

Query: 435 ISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFI 478
           +S G  H VV+T    ++ +G  E  +LG D+      P ++ +
Sbjct: 485 VSCGDNHVVVLTRNKEVYSWGCGEYGRLGLDSEEDYYTPQKVDV 528



 Score = 68.6 bits (166), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 81/375 (21%), Positives = 146/375 (38%), Gaps = 28/375 (7%)

Query: 98  QSVEHSSDIVETSAGNMQITTGRYHTLLIS-NSSVFSC-----GSSLCGVLGHGPETTQC 151
           +S     D++++     Q+  G  H  +++    +++      G+ L G LGHG + +  
Sbjct: 356 KSTPQKLDVIKSGCSARQVCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDKASY- 414

Query: 152 VSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRP-IFRPRLV 210
                +       + QVS  ++    V   GQ++  G +   C G      P +  P  +
Sbjct: 415 RQPKHVEKLQGKAIHQVSCGDDFTVCVTDEGQLYAFGSDYYGCMGVDKVAGPEVLEPMQL 474

Query: 211 EALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSI-APLEEVG 269
                 P +QV+ G N    LT    V++ G   +G+LG     D  TP+ +  P   + 
Sbjct: 475 NFFLSNPVEQVSCGDNHVVVLTRNKEVYSWGCGEYGRLGLDSEEDYYTPQKVDVPKALII 534

Query: 270 SVVQIAAGPSYMLAVTGNGVVYSFGS----GSNFCL----GHGEQHDELQPRAIQTFRRK 321
             VQ     +++L  +G  +          G N C+     H   H+     +    ++ 
Sbjct: 535 VAVQCGCDGTFLLTQSGKVLACGLNEFNKLGLNQCMSGIINHEAYHEVPYTTSFTLAKQL 594

Query: 322 GIHVVR-VSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLS-SLKSHLAVQ 379
             + +R ++ G  H  A+D  G + T+G   CG LG G+   +     L   L     ++
Sbjct: 595 SFYKIRTIAPGKTHTAAIDERGRLLTFGCNKCGQLGVGNYKKRLGINLLGGPLGGKQVIR 654

Query: 380 VCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD------RGVSDKVLRPRILDSLRAHHVS 433
           V      T    D   ++ +G  G G L            +     RP I  SL  HHV 
Sbjct: 655 VSCGDEFTIAATDDNHIFAWGNGGNGRLAMTPTERPHGSDICTSWPRP-IFGSL--HHVP 711

Query: 434 QISTGLYHTVVVTDR 448
            +S   +HT+++ ++
Sbjct: 712 DLSCRGWHTILIVEK 726



 Score = 64.7 bits (156), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 96/388 (24%), Positives = 155/388 (39%), Gaps = 47/388 (12%)

Query: 113 NMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           N      R  T+  +  +V +  +S   + G G  T Q +   +    S     QV A  
Sbjct: 323 NAPTKRPRSSTVTEAPIAVVTSRTSEVYIWGGGKSTPQKLDVIK----SGCSARQVCAGN 378

Query: 173 NHAAFVLQSGQVFTC-----GDNSSFCCGHRDTNRPIFR-PRLVEALKGVPCKQVTAGLN 226
            H A V    +++T      G       GH D  +  +R P+ VE L+G    QV+ G +
Sbjct: 379 THFAVVTVEKELYTWVNMQGGTKLHGQLGHGD--KASYRQPKHVEKLQGKAIHQVSCGDD 436

Query: 227 FTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPT-PKSIAPLE----EVGSVVQIAAGPSYM 281
           FT  +T  G ++  GS+ +G +G    +D+   P+ + P++        V Q++ G +++
Sbjct: 437 FTVCVTDEGQLYAFGSDYYGCMG----VDKVAGPEVLEPMQLNFFLSNPVEQVSCGDNHV 492

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 341
           + +T N  VYS+G G    LG   + D   P+ +     K + +V V  G +    L  S
Sbjct: 493 VVLTRNKEVYSWGCGEYGRLGLDSEEDYYTPQKVDV--PKALIIVAVQCGCDGTFLLTQS 550

Query: 342 GYVYTWGKGYCGALGHGD------------EIDKTLPEPLSSLKSHLAVQVCAR-KRKTF 388
           G V   G      LG               E+  T    L+   S   ++  A  K  T 
Sbjct: 551 GKVLACGLNEFNKLGLNQCMSGIINHEAYHEVPYTTSFTLAKQLSFYKIRTIAPGKTHTA 610

Query: 389 VLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRIL-DSLRAHHVSQISTGLYHTVVVTD 447
            + + G +  FG    G LG    G   K L   +L   L    V ++S G   T+  TD
Sbjct: 611 AIDERGRLLTFGCNKCGQLGV---GNYKKRLGINLLGGPLGGKQVIRVSCGDEFTIAATD 667

Query: 448 RGRLFGFGDNERAQLGHDTLRGCLEPTE 475
              +F +G+    +L        + PTE
Sbjct: 668 DNHIFAWGNGGNGRLA-------MTPTE 688



 Score = 49.3 bits (116), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 43/147 (29%), Positives = 65/147 (44%), Gaps = 17/147 (11%)

Query: 335 VVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHL-AVQVCARKRKTFVLVDT 393
            V    +  VY WG G            K+ P+ L  +KS   A QVCA      V+   
Sbjct: 340 AVVTSRTSEVYIWGGG------------KSTPQKLDVIKSGCSARQVCAGNTHFAVVTVE 387

Query: 394 GSVYGFGWMGFGSLGFPDRGVSDKV--LRPRILDSLRAHHVSQISTGLYHTVVVTDRGRL 451
             +Y +  M  G+      G  DK    +P+ ++ L+   + Q+S G   TV VTD G+L
Sbjct: 388 KELYTWVNMQGGTKLHGQLGHGDKASYRQPKHVEKLQGKAIHQVSCGDDFTVCVTDEGQL 447

Query: 452 FGFGDNERAQLGHDTLRG--CLEPTEI 476
           + FG +    +G D + G   LEP ++
Sbjct: 448 YAFGSDYYGCMGVDKVAGPEVLEPMQL 474


>gi|380817902|gb|AFE80825.1| serine/threonine-protein kinase Nek9 [Macaca mulatta]
 gi|383422787|gb|AFH34607.1| serine/threonine-protein kinase Nek9 [Macaca mulatta]
          Length = 975

 Score =  105 bits (262), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 82/275 (29%), Positives = 126/275 (45%), Gaps = 21/275 (7%)

Query: 207 PRLVEALK-GVPCKQVTAGLNFTGFLTIRGHVHTC-----GSNTHGQLGHGDTLDRPTPK 260
           P+ ++ +K G   +QV AG      +T+   ++T      G+  HGQLGHGD      PK
Sbjct: 359 PQKLDVIKSGCSARQVCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDKASYRQPK 418

Query: 261 SIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH--DELQPRAIQTF 318
            +  L+   ++ Q++ G  + + VT  G +Y+FGS    C+G  +    + L+P  +  F
Sbjct: 419 HVEKLQG-KAIHQVSCGDDFTVCVTDEGQLYAFGSDYYGCIGVDKVAGPEVLEPMQLNFF 477

Query: 319 RRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAV 378
               +   +VS GD HVV L  +  VY+WG G  G LG   E D   P+ +   K+ + V
Sbjct: 478 LSNPVE--QVSCGDNHVVVLTRNKEVYSWGCGEYGRLGLDSEEDYYTPQKVDVPKALIIV 535

Query: 379 QVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD--RGVSDKVLRPRI--------LDSLR 428
            V      TF+L  +G V   G   F  LG      G+ +      +           L 
Sbjct: 536 AVQCGCDGTFLLTQSGKVLACGLNEFNKLGLNQCMSGIINHEAYHEVPYTTSFTLAKQLS 595

Query: 429 AHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 463
            + +  I+ G  HT  + +RGRL  FG N+  QLG
Sbjct: 596 FYKIRTIAPGKTHTAAIDERGRLLTFGCNKCGQLG 630



 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 76/307 (24%), Positives = 128/307 (41%), Gaps = 40/307 (13%)

Query: 115 QITTGRYHTLLISNS-SVFSCGSSLCGVLG----HGPETTQCVSFTRINFPSAAHVVQVS 169
           Q++ G   T+ +++   +++ GS   G +G     GPE  + +   ++NF  +  V QVS
Sbjct: 430 QVSCGDDFTVCVTDEGQLYAFGSDYYGCIGVDKVAGPEVLEPM---QLNFFLSNPVEQVS 486

Query: 170 ASENHAAFVLQSGQVFTCGDNSSFCCGHR-----DTNRPIFRPRLVEALKGVPCKQVTAG 224
             +NH   + ++ +V++ G      CG       D+    + P+ V+  K +    V  G
Sbjct: 487 CGDNHVVVLTRNKEVYSWG------CGEYGRLGLDSEEDYYTPQKVDVPKALIIVAVQCG 540

Query: 225 LNFTGFLTIRGHVHTCGSNTHGQLG----------HGDTLDRPTPKSIAPLEEVG--SVV 272
            + T  LT  G V  CG N   +LG          H    + P   S    +++    + 
Sbjct: 541 CDGTFLLTQSGKVLACGLNEFNKLGLNQCMSGIINHEAYHEVPYTTSFTLAKQLSFYKIR 600

Query: 273 QIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGD 332
            IA G ++  A+   G + +FG      LG G     L    +      G  V+RVS GD
Sbjct: 601 TIAPGKTHTAAIDERGRLLTFGCNKCGQLGVGNYKKRLGINLLGG-PLGGKQVIRVSCGD 659

Query: 333 EHVVALDSSGYVYTWGKGYCGALG-------HGDEIDKTLPEPLSSLKSHLAVQVCARKR 385
           E  +A     +++ WG G  G L        HG +I  + P P+     H+    C R  
Sbjct: 660 EFTIAATDDNHIFAWGNGGNGRLAMTPTERPHGSDICTSWPRPIFGSLHHVPDLSC-RGW 718

Query: 386 KTFVLVD 392
            T ++V+
Sbjct: 719 HTILIVE 725



 Score = 69.3 bits (168), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 81/375 (21%), Positives = 146/375 (38%), Gaps = 28/375 (7%)

Query: 98  QSVEHSSDIVETSAGNMQITTGRYHTLLIS-NSSVFSC-----GSSLCGVLGHGPETTQC 151
           +S     D++++     Q+  G  H  +++    +++      G+ L G LGHG + +  
Sbjct: 356 KSTPQKLDVIKSGCSARQVCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDKASY- 414

Query: 152 VSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRP-IFRPRLV 210
                +       + QVS  ++    V   GQ++  G +   C G      P +  P  +
Sbjct: 415 RQPKHVEKLQGKAIHQVSCGDDFTVCVTDEGQLYAFGSDYYGCIGVDKVAGPEVLEPMQL 474

Query: 211 EALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSI-APLEEVG 269
                 P +QV+ G N    LT    V++ G   +G+LG     D  TP+ +  P   + 
Sbjct: 475 NFFLSNPVEQVSCGDNHVVVLTRNKEVYSWGCGEYGRLGLDSEEDYYTPQKVDVPKALII 534

Query: 270 SVVQIAAGPSYMLAVTGNGVVYSFGS----GSNFCL----GHGEQHDELQPRAIQTFRRK 321
             VQ     +++L  +G  +          G N C+     H   H+     +    ++ 
Sbjct: 535 VAVQCGCDGTFLLTQSGKVLACGLNEFNKLGLNQCMSGIINHEAYHEVPYTTSFTLAKQL 594

Query: 322 GIHVVR-VSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLS-SLKSHLAVQ 379
             + +R ++ G  H  A+D  G + T+G   CG LG G+   +     L   L     ++
Sbjct: 595 SFYKIRTIAPGKTHTAAIDERGRLLTFGCNKCGQLGVGNYKKRLGINLLGGPLGGKQVIR 654

Query: 380 VCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD------RGVSDKVLRPRILDSLRAHHVS 433
           V      T    D   ++ +G  G G L            +     RP I  SL  HHV 
Sbjct: 655 VSCGDEFTIAATDDNHIFAWGNGGNGRLAMTPTERPHGSDICTSWPRP-IFGSL--HHVP 711

Query: 434 QISTGLYHTVVVTDR 448
            +S   +HT+++ ++
Sbjct: 712 DLSCRGWHTILIVEK 726



 Score = 68.9 bits (167), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 46/164 (28%), Positives = 74/164 (45%), Gaps = 6/164 (3%)

Query: 320 RKGIHVVRVSAGDEHVVALDSSGYVYTW-----GKGYCGALGHGDEIDKTLPEPLSSLKS 374
           + G    +V AG+ H   +     +YTW     G    G LGHGD+     P+ +  L+ 
Sbjct: 366 KSGCSARQVCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDKASYRQPKHVEKLQG 425

Query: 375 HLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQ 434
               QV      T  + D G +Y FG   +G +G  D+    +VL P  L+   ++ V Q
Sbjct: 426 KAIHQVSCGDDFTVCVTDEGQLYAFGSDYYGCIGV-DKVAGPEVLEPMQLNFFLSNPVEQ 484

Query: 435 ISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFI 478
           +S G  H VV+T    ++ +G  E  +LG D+      P ++ +
Sbjct: 485 VSCGDNHVVVLTRNKEVYSWGCGEYGRLGLDSEEDYYTPQKVDV 528



 Score = 65.1 bits (157), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 97/388 (25%), Positives = 155/388 (39%), Gaps = 47/388 (12%)

Query: 113 NMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           N      R  T+  +  +V +  +S   V G G  T Q +   +    S     QV A  
Sbjct: 323 NAPTKRPRSSTVTEAPIAVVTSRTSEVYVWGGGKSTPQKLDVIK----SGCSARQVCAGN 378

Query: 173 NHAAFVLQSGQVFTC-----GDNSSFCCGHRDTNRPIFR-PRLVEALKGVPCKQVTAGLN 226
            H A V    +++T      G       GH D  +  +R P+ VE L+G    QV+ G +
Sbjct: 379 THFAVVTVEKELYTWVNMQGGTKLHGQLGHGD--KASYRQPKHVEKLQGKAIHQVSCGDD 436

Query: 227 FTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPT-PKSIAPLE----EVGSVVQIAAGPSYM 281
           FT  +T  G ++  GS+ +G +G    +D+   P+ + P++        V Q++ G +++
Sbjct: 437 FTVCVTDEGQLYAFGSDYYGCIG----VDKVAGPEVLEPMQLNFFLSNPVEQVSCGDNHV 492

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 341
           + +T N  VYS+G G    LG   + D   P+ +     K + +V V  G +    L  S
Sbjct: 493 VVLTRNKEVYSWGCGEYGRLGLDSEEDYYTPQKVDV--PKALIIVAVQCGCDGTFLLTQS 550

Query: 342 GYVYTWGKGYCGALGHGD------------EIDKTLPEPLSSLKSHLAVQVCAR-KRKTF 388
           G V   G      LG               E+  T    L+   S   ++  A  K  T 
Sbjct: 551 GKVLACGLNEFNKLGLNQCMSGIINHEAYHEVPYTTSFTLAKQLSFYKIRTIAPGKTHTA 610

Query: 389 VLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRIL-DSLRAHHVSQISTGLYHTVVVTD 447
            + + G +  FG    G LG    G   K L   +L   L    V ++S G   T+  TD
Sbjct: 611 AIDERGRLLTFGCNKCGQLGV---GNYKKRLGINLLGGPLGGKQVIRVSCGDEFTIAATD 667

Query: 448 RGRLFGFGDNERAQLGHDTLRGCLEPTE 475
              +F +G+    +L        + PTE
Sbjct: 668 DNHIFAWGNGGNGRLA-------MTPTE 688



 Score = 49.3 bits (116), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 43/147 (29%), Positives = 65/147 (44%), Gaps = 17/147 (11%)

Query: 335 VVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHL-AVQVCARKRKTFVLVDT 393
            V    +  VY WG G            K+ P+ L  +KS   A QVCA      V+   
Sbjct: 340 AVVTSRTSEVYVWGGG------------KSTPQKLDVIKSGCSARQVCAGNTHFAVVTVE 387

Query: 394 GSVYGFGWMGFGSLGFPDRGVSDKV--LRPRILDSLRAHHVSQISTGLYHTVVVTDRGRL 451
             +Y +  M  G+      G  DK    +P+ ++ L+   + Q+S G   TV VTD G+L
Sbjct: 388 KELYTWVNMQGGTKLHGQLGHGDKASYRQPKHVEKLQGKAIHQVSCGDDFTVCVTDEGQL 447

Query: 452 FGFGDNERAQLGHDTLRG--CLEPTEI 476
           + FG +    +G D + G   LEP ++
Sbjct: 448 YAFGSDYYGCIGVDKVAGPEVLEPMQL 474


>gi|224496032|ref|NP_001139103.1| probable E3 ubiquitin-protein ligase HERC4-like [Danio rerio]
          Length = 992

 Score =  105 bits (262), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 68/208 (32%), Positives = 110/208 (52%), Gaps = 6/208 (2%)

Query: 164 HVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTA 223
            V+Q++  + H+  +   GQ+F  G+N+    G R        P+ +++L  +P  Q++A
Sbjct: 116 QVIQIACGDQHSMALSNDGQLFVWGENTHGQLGLRKEQAGTQSPQHLQSLCEIPVAQISA 175

Query: 224 GLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG-SVVQIAAGPSYML 282
           G N +  L++ G V   GSN+ GQLG GDT DR  P  +  L   G   V I+ G  +  
Sbjct: 176 GGNHSFVLSLSGVVFGWGSNSAGQLGLGDTKDRFVPTIVKSL--CGKKTVSISCGGEHTA 233

Query: 283 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL-DSS 341
            ++  G V++FGSG    LGH    DE  PR I      G  V +V+ G  H +   +SS
Sbjct: 234 TLSKGGTVFTFGSGGFGQLGHNSLKDEHHPRLIAELW--GSKVSQVTCGRHHTLVFEESS 291

Query: 342 GYVYTWGKGYCGALGHGDEIDKTLPEPL 369
             +Y++G G  G LG+G+++ +++P P+
Sbjct: 292 KLIYSFGCGMQGQLGNGEQVKQSVPLPV 319



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 65/200 (32%), Positives = 101/200 (50%), Gaps = 7/200 (3%)

Query: 267 EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLG-HGEQHDELQPRAIQTFRRKGIHV 325
           E   V+QIA G  + +A++ +G ++ +G  ++  LG   EQ     P+ +Q+     I V
Sbjct: 113 ENRQVIQIACGDQHSMALSNDGQLFVWGENTHGQLGLRKEQAGTQSPQHLQSLCE--IPV 170

Query: 326 VRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKR 385
            ++SAG  H   L  SG V+ WG    G LG GD  D+ +P  + SL     V +     
Sbjct: 171 AQISAGGNHSFVLSLSGVVFGWGSNSAGQLGLGDTKDRFVPTIVKSLCGKKTVSISCGGE 230

Query: 386 KTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVV 445
            T  L   G+V+ FG  GFG LG     + D+   PR++  L    VSQ++ G +HT+V 
Sbjct: 231 HTATLSKGGTVFTFGSGGFGQLG--HNSLKDE-HHPRLIAELWGSKVSQVTCGRHHTLVF 287

Query: 446 TDRGRL-FGFGDNERAQLGH 464
            +  +L + FG   + QLG+
Sbjct: 288 EESSKLIYSFGCGMQGQLGN 307



 Score = 81.6 bits (200), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 73/267 (27%), Positives = 117/267 (43%), Gaps = 14/267 (5%)

Query: 151 CVSFTRINFPSAAHVVQVSASENHAAFVLQSGQV--FTCGDNSSFCCGHRDTNRPIFRP- 207
           C+ F R    S   +    A E      LQ+ ++    CG+  +      D  + +    
Sbjct: 45  CIGFIREGKVSVLRLHNEDADEKLEPLQLQNERIRSIVCGEAGAVLLA--DDGKVLIMDQ 102

Query: 208 ----RLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLG-HGDTLDRPTPKSI 262
               R +++L+     Q+  G   +  L+  G +   G NTHGQLG   +     +P+ +
Sbjct: 103 STVCRPLKSLENRQVIQIACGDQHSMALSNDGQLFVWGENTHGQLGLRKEQAGTQSPQHL 162

Query: 263 APLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKG 322
             L E+  V QI+AG ++   ++ +GVV+ +GS S   LG G+  D   P  +++    G
Sbjct: 163 QSLCEI-PVAQISAGGNHSFVLSLSGVVFGWGSNSAGQLGLGDTKDRFVPTIVKSL--CG 219

Query: 323 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCA 382
              V +S G EH   L   G V+T+G G  G LGH    D+  P  ++ L      QV  
Sbjct: 220 KKTVSISCGGEHTATLSKGGTVFTFGSGGFGQLGHNSLKDEHHPRLIAELWGSKVSQVTC 279

Query: 383 RKRKTFVLVDTGS-VYGFGWMGFGSLG 408
            +  T V  ++   +Y FG    G LG
Sbjct: 280 GRHHTLVFEESSKLIYSFGCGMQGQLG 306



 Score = 72.8 bits (177), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 50/146 (34%), Positives = 75/146 (51%), Gaps = 4/146 (2%)

Query: 324 HVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTL-PEPLSSLKSHLAVQVCA 382
            V++++ GD+H +AL + G ++ WG+   G LG   E   T  P+ L SL      Q+ A
Sbjct: 116 QVIQIACGDQHSMALSNDGQLFVWGENTHGQLGLRKEQAGTQSPQHLQSLCEIPVAQISA 175

Query: 383 RKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHT 442
               +FVL  +G V+G+G    G LG  D    D+ + P I+ SL       IS G  HT
Sbjct: 176 GGNHSFVLSLSGVVFGWGSNSAGQLGLGD--TKDRFV-PTIVKSLCGKKTVSISCGGEHT 232

Query: 443 VVVTDRGRLFGFGDNERAQLGHDTLR 468
             ++  G +F FG     QLGH++L+
Sbjct: 233 ATLSKGGTVFTFGSGGFGQLGHNSLK 258



 Score = 50.1 bits (118), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 48/173 (27%), Positives = 72/173 (41%), Gaps = 21/173 (12%)

Query: 303 HGEQHDE-LQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEI 361
           H E  DE L+P  +Q  R + I       G+   V L   G V    +            
Sbjct: 60  HNEDADEKLEPLQLQNERIRSI-----VCGEAGAVLLADDGKVLIMDQS----------- 103

Query: 362 DKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRP 421
             T+  PL SL++   +Q+    + +  L + G ++ +G    G LG   R        P
Sbjct: 104 --TVCRPLKSLENRQVIQIACGDQHSMALSNDGQLFVWGENTHGQLGL--RKEQAGTQSP 159

Query: 422 RILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPT 474
           + L SL    V+QIS G  H+ V++  G +FG+G N   QLG    +    PT
Sbjct: 160 QHLQSLCEIPVAQISAGGNHSFVLSLSGVVFGWGSNSAGQLGLGDTKDRFVPT 212


>gi|355694501|gb|AER99690.1| hect domain and RLD 5 [Mustela putorius furo]
          Length = 675

 Score =  105 bits (262), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 74/241 (30%), Positives = 126/241 (52%), Gaps = 6/241 (2%)

Query: 165 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 224
           ++Q++  + H+  + + G++F  G N     G       I  P+LVE L GVP  Q++AG
Sbjct: 49  IIQITCGDYHSLALSKGGELFAWGQNLHGQLGIGRLFASIPTPQLVEHLSGVPLVQISAG 108

Query: 225 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 284
              +  L++ G++++ G N  GQLG G T     P  +  L+    V  +A G S+   +
Sbjct: 109 KAHSMALSMSGNIYSWGRNDLGQLGLGHTDGEEFPSLVEALDS-QKVEFLACGGSHTALL 167

Query: 285 TGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS-GY 343
           T +G V++FG+G +  LGH    +EL+PR +      GI V +V+ G  H +A  S  G 
Sbjct: 168 TEDGQVFTFGAGKHGQLGHNSTQNELRPRLVTEL--TGIRVTQVACGRRHTLAYVSDLGK 225

Query: 344 VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCAR-KRKTFVLVDTGSVYGFGWM 402
           V+++G G  G LG+G   ++ +P P+  L S+  ++  +R   K  +++  G+     WM
Sbjct: 226 VFSFGSGKEGQLGNGGTHNQLIPLPM-KLPSNEDLKFESRTSEKELIMIAGGNQSILLWM 284

Query: 403 G 403
           G
Sbjct: 285 G 285



 Score = 95.9 bits (237), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 74/223 (33%), Positives = 110/223 (49%), Gaps = 9/223 (4%)

Query: 99  SVEHSS-DIVETSAGNMQITTGRYHTLLISN-SSVFSCGSSLCGVLGHGPETTQCVSFTR 156
           S+EH+    +      +QIT G YH+L +S    +F+ G +L G LG G       +   
Sbjct: 34  SIEHARFQCILQEKSIIQITCGDYHSLALSKGGELFAWGQNLHGQLGIGRLFASIPTPQL 93

Query: 157 INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNS--SFCCGHRDTNRPIFRPRLVEALK 214
           +   S   +VQ+SA + H+  +  SG +++ G N       GH D       P LVEAL 
Sbjct: 94  VEHLSGVPLVQISAGKAHSMALSMSGNIYSWGRNDLGQLGLGHTDGEE---FPSLVEALD 150

Query: 215 GVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQI 274
               + +  G + T  LT  G V T G+  HGQLGH  T +   P+ +  L  +  V Q+
Sbjct: 151 SQKVEFLACGGSHTALLTEDGQVFTFGAGKHGQLGHNSTQNELRPRLVTELTGI-RVTQV 209

Query: 275 AAGPSYMLA-VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQ 316
           A G  + LA V+  G V+SFGSG    LG+G  H++L P  ++
Sbjct: 210 ACGRRHTLAYVSDLGKVFSFGSGKEGQLGNGGTHNQLIPLPMK 252



 Score = 89.7 bits (221), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 60/197 (30%), Positives = 101/197 (51%), Gaps = 7/197 (3%)

Query: 270 SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDEL-QPRAIQTFRRKGIHVVRV 328
           S++QI  G  + LA++  G ++++G   +  LG G     +  P+ ++     G+ +V++
Sbjct: 48  SIIQITCGDYHSLALSKGGELFAWGQNLHGQLGIGRLFASIPTPQLVEHL--SGVPLVQI 105

Query: 329 SAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTF 388
           SAG  H +AL  SG +Y+WG+   G LG G    +  P  + +L S     +      T 
Sbjct: 106 SAGKAHSMALSMSGNIYSWGRNDLGQLGLGHTDGEEFPSLVEALDSQKVEFLACGGSHTA 165

Query: 389 VLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV-VTD 447
           +L + G V+ FG    G LG      +   LRPR++  L    V+Q++ G  HT+  V+D
Sbjct: 166 LLTEDGQVFTFGAGKHGQLG---HNSTQNELRPRLVTELTGIRVTQVACGRRHTLAYVSD 222

Query: 448 RGRLFGFGDNERAQLGH 464
            G++F FG  +  QLG+
Sbjct: 223 LGKVFSFGSGKEGQLGN 239


>gi|348534545|ref|XP_003454762.1| PREDICTED: hypothetical protein LOC100691941 [Oreochromis
           niloticus]
          Length = 1536

 Score =  105 bits (262), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 86/302 (28%), Positives = 145/302 (48%), Gaps = 15/302 (4%)

Query: 166 VQVSASENHAAFVLQSGQVFTCGDNS--SFCCGHRDTNRPIFRPRLVEALKGVPCKQVTA 223
           ++++  + H A + ++G++F  G N+      G + T   + +P  V+ALK    + V  
Sbjct: 39  LRIACGDEHTALITENGKLFMFGSNNWGQLGLGSKVT---VNKPTCVKALKSEKVQLVAC 95

Query: 224 GLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 283
           G N T   T +G V+  G N+ GQLG GD  +R + K +   +  G +  +AAG +   A
Sbjct: 96  GRNHTLICTAKGKVYASGGNSEGQLGLGDCEERTSFKRLDFFDSQGPIKMLAAGSNTSAA 155

Query: 284 VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 343
           +T +G ++ +G  +   +G G++     P+ +      G  +  VS G  H   +   G 
Sbjct: 156 LTVSGKLFMWGDNTEGQIGLGKESQVSSPQEVSV----GQPISWVSCGYYHSALVTVDGA 211

Query: 344 VYTWGKGYCGALGHGDE--IDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGW 401
           +YT+G+   G LG G        +P+ + S+K  +  QV      T  L + G+VY FG 
Sbjct: 212 LYTFGERDSGKLGLGTHQLPGHRVPQLVKSIKEPVR-QVACGGGHTVALAE-GNVYTFGL 269

Query: 402 MGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQ 461
             FG LG        +V  PR+++  +     Q+  G  HT V+T+ G L+ FGD    +
Sbjct: 270 GQFGQLGHGTFIFESRV--PRLVEHFKKGRACQVVCGENHTAVITEDGLLYTFGDGRHGK 327

Query: 462 LG 463
           LG
Sbjct: 328 LG 329



 Score = 81.3 bits (199), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 76/251 (30%), Positives = 125/251 (49%), Gaps = 16/251 (6%)

Query: 116 ITTGRYHTLL-ISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINF-PSAAHVVQVSASEN 173
           +  GR HTL+  +   V++ G +  G LG G +  +  SF R++F  S   +  ++A  N
Sbjct: 93  VACGRNHTLICTAKGKVYASGGNSEGQLGLG-DCEERTSFKRLDFFDSQGPIKMLAAGSN 151

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
            +A +  SG++F  GDN+    G    ++ +  P+ V    G P   V+ G   +  +T+
Sbjct: 152 TSAALTVSGKLFMWGDNTEGQIGLGKESQ-VSSPQEVSV--GQPISWVSCGYYHSALVTV 208

Query: 234 RGHVHTCGSNTHGQLGHGDTLDRP---TPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 290
            G ++T G    G+LG G T   P    P+ +  ++E   V Q+A G  + +A+   G V
Sbjct: 209 DGALYTFGERDSGKLGLG-THQLPGHRVPQLVKSIKE--PVRQVACGGGHTVAL-AEGNV 264

Query: 291 YSFGSGSNFCLGHGEQHDELQ-PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 349
           Y+FG G    LGHG    E + PR ++ F++      +V  G+ H   +   G +YT+G 
Sbjct: 265 YTFGLGQFGQLGHGTFIFESRVPRLVEHFKKG--RACQVVCGENHTAVITEDGLLYTFGD 322

Query: 350 GYCGALGHGDE 360
           G  G LG G+E
Sbjct: 323 GRHGKLGLGEE 333



 Score = 78.2 bits (191), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 70/248 (28%), Positives = 114/248 (45%), Gaps = 7/248 (2%)

Query: 220 QVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPS 279
           ++  G   T  +T  G +   GSN  GQLG G  +    P  +  L+    V  +A G +
Sbjct: 40  RIACGDEHTALITENGKLFMFGSNNWGQLGLGSKVTVNKPTCVKALKSE-KVQLVACGRN 98

Query: 280 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 339
           + L  T  G VY+ G  S   LG G+  +    + +  F  +G  +  ++AG     AL 
Sbjct: 99  HTLICTAKGKVYASGGNSEGQLGLGDCEERTSFKRLDFFDSQG-PIKMLAAGSNTSAALT 157

Query: 340 SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGF 399
            SG ++ WG    G +G G E   + P+ +S +   ++   C       V VD G++Y F
Sbjct: 158 VSGKLFMWGDNTEGQIGLGKESQVSSPQEVS-VGQPISWVSCGYYHSALVTVD-GALYTF 215

Query: 400 GWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNER 459
           G    G LG     +    + P+++ S++   V Q++ G  HTV + + G ++ FG  + 
Sbjct: 216 GERDSGKLGLGTHQLPGHRV-PQLVKSIK-EPVRQVACGGGHTVALAE-GNVYTFGLGQF 272

Query: 460 AQLGHDTL 467
            QLGH T 
Sbjct: 273 GQLGHGTF 280



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 47/184 (25%), Positives = 75/184 (40%), Gaps = 6/184 (3%)

Query: 295 SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGA 354
           SG+ F  G  +  D +  +    F  K    +R++ GDEH   +  +G ++ +G    G 
Sbjct: 12  SGAVFTFGKSKFADNIPSK----FWLKNDIPLRIACGDEHTALITENGKLFMFGSNNWGQ 67

Query: 355 LGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGV 414
           LG G ++    P  + +LKS     V   +  T +    G VY  G    G LG  D   
Sbjct: 68  LGLGSKVTVNKPTCVKALKSEKVQLVACGRNHTLICTAKGKVYASGGNSEGQLGLGDCEE 127

Query: 415 SDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPT 474
                R    DS     +  ++ G   +  +T  G+LF +GDN   Q+G         P 
Sbjct: 128 RTSFKRLDFFDS--QGPIKMLAAGSNTSAALTVSGKLFMWGDNTEGQIGLGKESQVSSPQ 185

Query: 475 EIFI 478
           E+ +
Sbjct: 186 EVSV 189


>gi|386780927|ref|NP_001247543.1| RCC1 and BTB domain-containing protein 1 [Macaca mulatta]
 gi|402902026|ref|XP_003913930.1| PREDICTED: RCC1 and BTB domain-containing protein 1 isoform 1
           [Papio anubis]
 gi|355754700|gb|EHH58601.1| Regulator of chromosome condensation and BTB domain-containing
           protein 1 [Macaca fascicularis]
 gi|383419643|gb|AFH33035.1| RCC1 and BTB domain-containing protein 1 [Macaca mulatta]
 gi|383419645|gb|AFH33036.1| RCC1 and BTB domain-containing protein 1 [Macaca mulatta]
          Length = 531

 Score =  105 bits (262), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 78/255 (30%), Positives = 123/255 (48%), Gaps = 11/255 (4%)

Query: 230 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGSVVQIAAGPSYMLAVTGN 287
           ++T    V   G N    LG GD      PK +  L  +++ S+    +GP  +L+ T +
Sbjct: 36  YVTDDDEVFVFGLNYSNCLGTGDNQSTLVPKKLEGLSGKKIKSL-SYGSGPHVLLS-TED 93

Query: 288 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGI-HVVRVSAGDEHVVALDSSGYVYT 346
           GVVY++G      LG+G  +  + P  IQ      I  VV V+ G  H +AL + G V+ 
Sbjct: 94  GVVYAWGHNGYSQLGNGTTNQGIAP--IQVCTNLLIKQVVEVACGSHHSMALAADGEVFA 151

Query: 347 WGKGYCGALGHGDEIDKTLPEPLSS-LKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFG 405
           WG   CG +G G   ++  P  +++ L     V +   +  +  ++D G VYG+G+ G G
Sbjct: 152 WGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNG 211

Query: 406 SLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHD 465
            LG  + G     L P  + +L +  V+QI  G  HT+ +TD G L+ +G N   QLG  
Sbjct: 212 QLGLGNNG---NQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTG 268

Query: 466 TLRGCLEPTEIFIQE 480
                L P  I +++
Sbjct: 269 NKNNLLSPAHIMVEK 283



 Score = 88.2 bits (217), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 76/263 (28%), Positives = 121/263 (46%), Gaps = 14/263 (5%)

Query: 163 AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 222
           A V   SASE  A +V    +VF  G N S C G  D N+    P+ +E L G   K ++
Sbjct: 24  ACVFGTSASE--ALYVTDDDEVFVFGLNYSNCLGTGD-NQSTLVPKKLEGLSGKKIKSLS 80

Query: 223 AGLNFTGFLTIR-GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 281
            G      L+   G V+  G N + QLG+G T     P  +     +  VV++A G  + 
Sbjct: 81  YGSGPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGSHHS 140

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQT---FRRKGIHVVRVSAGDEHVVAL 338
           +A+  +G V+++G  +   +G G   ++  PR +      +R    VV ++ G    +A+
Sbjct: 141 MALAADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKR----VVGIACGQTSSMAV 196

Query: 339 DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYG 398
             +G VY WG    G LG G+  ++  P  +++L S    Q+      T  L D G +Y 
Sbjct: 197 LDNGEVYGWGYNGNGQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYA 256

Query: 399 FGWMGFGSLGFPDRGVSDKVLRP 421
           +G   +G LG    G  + +L P
Sbjct: 257 WGANTYGQLG---TGNKNNLLSP 276



 Score = 83.2 bits (204), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 63/228 (27%), Positives = 97/228 (42%), Gaps = 3/228 (1%)

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
           H     + G V+  G N     G+  TN+ I   ++   L      +V  G + +  L  
Sbjct: 86  HVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGSHHSMALAA 145

Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
            G V   G N  GQ+G G T ++PTP+ +     +  VV IA G +  +AV  NG VY +
Sbjct: 146 DGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGW 205

Query: 294 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 353
           G   N  LG G   ++L P  +       + V ++  G  H +AL   G +Y WG    G
Sbjct: 206 GYNGNGQLGLGNNGNQLTPVRVAALH--SVCVNQIVCGYAHTLALTDEGLLYAWGANTYG 263

Query: 354 ALGHGDEIDKTLPEPLSSLKSHLA-VQVCARKRKTFVLVDTGSVYGFG 400
            LG G++ +   P  +   K  +  +  C     +      G VY +G
Sbjct: 264 QLGTGNKNNLLSPAHIMVEKERVVEIAACHSAHTSAAKTQGGHVYMWG 311



 Score = 60.8 bits (146), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 56/184 (30%), Positives = 86/184 (46%), Gaps = 6/184 (3%)

Query: 114 MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           +++  G +H++ L ++  VF+ G + CG +G G    Q       N      VV ++  +
Sbjct: 131 VEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQ 190

Query: 173 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 232
             +  VL +G+V+  G N +   G    N     P  V AL  V   Q+  G   T  LT
Sbjct: 191 TSSMAVLDNGEVYGWGYNGNGQLG-LGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALT 249

Query: 233 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY--MLAVTGNGVV 290
             G ++  G+NT+GQLG G+  +  +P  I  + E   VV+IAA  S     A T  G V
Sbjct: 250 DEGLLYAWGANTYGQLGTGNKNNLLSPAHI--MVEKERVVEIAACHSAHTSAAKTQGGHV 307

Query: 291 YSFG 294
           Y +G
Sbjct: 308 YMWG 311


>gi|449685467|ref|XP_002154638.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like, partial
           [Hydra magnipapillata]
          Length = 1679

 Score =  105 bits (262), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 110/372 (29%), Positives = 167/372 (44%), Gaps = 51/372 (13%)

Query: 48  LYPQK---FRSLVDLAASQLC--------ALHSIYAGMSRNVQIELLNRCNGNWKRVLRF 96
           L P+K   F++ + L A Q C        +LH+   G         L   + + K+ L  
Sbjct: 359 LTPKKNDAFKNAIQLEAGQYCTFALFDDGSLHACGKGSHGK-----LGLGDSSSKQCLHK 413

Query: 97  LQSVEHSSDIVETSAGNMQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFT 155
           L     + D + +S G+        HTL L  N  V+S G    G LGHG   TQ +   
Sbjct: 414 LNLFNQNIDQISSSKGSDS------HTLALTKNGVVYSWGDGEFGKLGHGNVATQKLPKV 467

Query: 156 RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFR-PRLVEALK 214
                    +  +SA   H+A + + G ++T G+      GH D++  I R P LV ++ 
Sbjct: 468 IRGVFKNQIITFISAGSRHSAAITKDGDLYTWGEGEHGRLGHGDSS--IQRVPTLVRSID 525

Query: 215 GVPCKQVTAGLNFTGFLTI-RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
                QV AG + T  L+     V T G+  +G+LGHG+T     PK +  L+ +  + +
Sbjct: 526 AA--SQVAAGCSHTVVLSKDEMTVWTFGAGDNGKLGHGNTKMEYYPKIVDALKGI-RIKK 582

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHD-ELQPRAIQTFRRKGIHVVRVSAGD 332
           IAAG    +A+T  G +Y +G G   CLG G      L P+ +++ R   +H+V +S GD
Sbjct: 583 IAAGTQCSIALTWTGFIYVWGCGP--CLGVGAADAVHLLPKIVESLR--DVHIVDISLGD 638

Query: 333 EHVVALDSSGYVYTWGK---GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFV 389
            H +AL +   VY+WG    G CG LGH          P+S     L  +V A       
Sbjct: 639 CHCLALSADHEVYSWGNNNMGQCG-LGH-------CFTPVS-----LPTKVLALDGIKIE 685

Query: 390 LVDTGSVYGFGW 401
            + TG+ + F W
Sbjct: 686 QISTGTSHSFAW 697



 Score = 98.2 bits (243), Expect = 9e-18,   Method: Composition-based stats.
 Identities = 74/248 (29%), Positives = 122/248 (49%), Gaps = 14/248 (5%)

Query: 231 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 290
           LT  G V++ G    G+LGHG+   +  PK I  + +   +  I+AG  +  A+T +G +
Sbjct: 437 LTKNGVVYSWGDGEFGKLGHGNVATQKLPKVIRGVFKNQIITFISAGSRHSAAITKDGDL 496

Query: 291 YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY-VYTWGK 349
           Y++G G +  LGHG+   +  P  +++         +V+AG  H V L      V+T+G 
Sbjct: 497 YTWGEGEHGRLGHGDSSIQRVPTLVRSIDAAS----QVAAGCSHTVVLSKDEMTVWTFGA 552

Query: 350 GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGF 409
           G  G LGHG+   +  P+ + +LK     ++ A  + +  L  TG +Y   W     LG 
Sbjct: 553 GDNGKLGHGNTKMEYYPKIVDALKGIRIKKIAAGTQCSIALTWTGFIY--VWGCGPCLGV 610

Query: 410 PDRGVSDKV-LRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLR 468
              G +D V L P+I++SLR  H+  IS G  H + ++    ++ +G+N   Q G   L 
Sbjct: 611 ---GAADAVHLLPKIVESLRDVHIVDISLGDCHCLALSADHEVYSWGNNNMGQCG---LG 664

Query: 469 GCLEPTEI 476
            C  P  +
Sbjct: 665 HCFTPVSL 672



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 64/235 (27%), Positives = 112/235 (47%), Gaps = 10/235 (4%)

Query: 232 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 291
           +++   +  GSN+  QL  G+     TPK     +   + +Q+ AG     A+  +G ++
Sbjct: 334 SLKHEAYAWGSNSSHQLVEGNKDKILTPKKNDAFK---NAIQLEAGQYCTFALFDDGSLH 390

Query: 292 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 351
           + G GS+  LG G+   +     +  F +    +      D H +AL  +G VY+WG G 
Sbjct: 391 ACGKGSHGKLGLGDSSSKQCLHKLNLFNQNIDQISSSKGSDSHTLALTKNGVVYSWGDGE 450

Query: 352 CGALGHGDEIDKTLPEPLSSL-KSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFP 410
            G LGHG+   + LP+ +  + K+ +   + A  R +  +   G +Y +G    G LG  
Sbjct: 451 FGKLGHGNVATQKLPKVIRGVFKNQIITFISAGSRHSAAITKDGDLYTWGEGEHGRLGHG 510

Query: 411 DRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT-DRGRLFGFGDNERAQLGH 464
           D  +      P ++ S+ A   SQ++ G  HTVV++ D   ++ FG  +  +LGH
Sbjct: 511 DSSIQRV---PTLVRSIDA--ASQVAAGCSHTVVLSKDEMTVWTFGAGDNGKLGH 560


>gi|91204161|emb|CAJ71814.1| conserved hypothetical protein [Candidatus Kuenenia
           stuttgartiensis]
          Length = 411

 Score =  105 bits (262), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 83/301 (27%), Positives = 137/301 (45%), Gaps = 17/301 (5%)

Query: 163 AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 222
           A V Q+S   +H+  +   G V+  G N +   G   TN   F  + V+ L+ V    + 
Sbjct: 36  AAVPQISGGGSHSLVLKPDGTVWAWGGNHAGQLGDGTTNPRKFAIQ-VKGLEDVVS--IA 92

Query: 223 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 282
           AG      +   G V   G+N  GQLG G   +R TP  +  +++   V +I AG  + +
Sbjct: 93  AGWEHNLAVKSDGTVWAWGNNRFGQLGDGTNENRNTPVKVKTIKD---VTEIDAGFYHSI 149

Query: 283 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 342
           A+  +G V+ +G+     LG G + D  +P  +Q       +VV VS G+ H + L + G
Sbjct: 150 ALQSDGTVWVWGNNELDQLGDGTKSDAYKPMQVQGLN----NVVAVSGGNHHNLVLKADG 205

Query: 343 YVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWM 402
            ++ WG    G LG G   + ++P P+       AV + +       +   GS++G+G  
Sbjct: 206 TIWGWGANGYGQLGDGTMTESSIPTPVYDFNG--AVFIASGNNYNVAVKADGSIWGWGMN 263

Query: 403 GFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQL 462
            +G LG    G       P  ++ L  ++   I+TG YH +++   G +   G N   QL
Sbjct: 264 TYGQLG---NGTQTNSKIPIRINGL--NNSVSIATGGYHALILQQDGTVLSMGYNRTGQL 318

Query: 463 G 463
           G
Sbjct: 319 G 319



 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 94/358 (26%), Positives = 159/358 (44%), Gaps = 26/358 (7%)

Query: 115 QITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 173
           QI+ G  H+L++  + +V++ G +  G LG G  TT    F  I       VV ++A   
Sbjct: 40  QISGGGSHSLVLKPDGTVWAWGGNHAGQLGDG--TTNPRKFA-IQVKGLEDVVSIAAGWE 96

Query: 174 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 233
           H   V   G V+  G+N     G   TN     P  V+ +K V   ++ AG   +  L  
Sbjct: 97  HNLAVKSDGTVWAWGNNRFGQLGD-GTNENRNTPVKVKTIKDV--TEIDAGFYHSIALQS 153

Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 293
            G V   G+N   QLG G   D   P  +  L    +VV ++ G  + L +  +G ++ +
Sbjct: 154 DGTVWVWGNNELDQLGDGTKSDAYKPMQVQGLN---NVVAVSGGNHHNLVLKADGTIWGW 210

Query: 294 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 353
           G+     LG G   +   P  +  F       V +++G+ + VA+ + G ++ WG    G
Sbjct: 211 GANGYGQLGDGTMTESSIPTPVYDFNG----AVFIASGNNYNVAVKADGSIWGWGMNTYG 266

Query: 354 ALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRG 413
            LG+G + +  +P  ++ L +  +V +        +L   G+V   G+   G LG    G
Sbjct: 267 QLGNGTQTNSKIPIRINGLNN--SVSIATGGYHALILQQDGTVLSMGYNRTGQLG---TG 321

Query: 414 VSDKVLRPRILDSLRAHHVSQ---ISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLR 468
            +          +L+ H +S    I+ G YH++ +   G ++ +G+NE  QLG  TL 
Sbjct: 322 ATSNYQYT----TLKVHGLSDVVSIAAGYYHSLALKKDGTIWAWGNNEYGQLGDGTLN 375



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 78/257 (30%), Positives = 117/257 (45%), Gaps = 14/257 (5%)

Query: 220 QVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPS 279
           Q++ G + +  L   G V   G N  GQLG G T  R     +  LE+V   V IAAG  
Sbjct: 40  QISGGGSHSLVLKPDGTVWAWGGNHAGQLGDGTTNPRKFAIQVKGLEDV---VSIAAGWE 96

Query: 280 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 339
           + LAV  +G V+++G+     LG G   +   P  ++T +     V  + AG  H +AL 
Sbjct: 97  HNLAVKSDGTVWAWGNNRFGQLGDGTNENRNTPVKVKTIK----DVTEIDAGFYHSIALQ 152

Query: 340 SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGF 399
           S G V+ WG      LG G + D   P  +  L +   V V        VL   G+++G+
Sbjct: 153 SDGTVWVWGNNELDQLGDGTKSDAYKPMQVQGLNN--VVAVSGGNHHNLVLKADGTIWGW 210

Query: 400 GWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNER 459
           G  G+G LG  D  +++  +   + D   A     I++G  + V V   G ++G+G N  
Sbjct: 211 GANGYGQLG--DGTMTESSIPTPVYDFNGAVF---IASGNNYNVAVKADGSIWGWGMNTY 265

Query: 460 AQLGHDTLRGCLEPTEI 476
            QLG+ T      P  I
Sbjct: 266 GQLGNGTQTNSKIPIRI 282



 Score = 76.3 bits (186), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 59/209 (28%), Positives = 100/209 (47%), Gaps = 13/209 (6%)

Query: 270 SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH-VVRV 328
           +V QI+ G S+ L +  +G V+++G      LG G  +    PR     + KG+  VV +
Sbjct: 37  AVPQISGGGSHSLVLKPDGTVWAWGGNHAGQLGDGTTN----PRKF-AIQVKGLEDVVSI 91

Query: 329 SAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTF 388
           +AG EH +A+ S G V+ WG    G LG G   ++  P  + ++K     ++ A    + 
Sbjct: 92  AAGWEHNLAVKSDGTVWAWGNNRFGQLGDGTNENRNTPVKVKTIKD--VTEIDAGFYHSI 149

Query: 389 VLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDR 448
            L   G+V+ +G      LG    G      +P  +  L  ++V  +S G +H +V+   
Sbjct: 150 ALQSDGTVWVWGNNELDQLG---DGTKSDAYKPMQVQGL--NNVVAVSGGNHHNLVLKAD 204

Query: 449 GRLFGFGDNERAQLGHDTLRGCLEPTEIF 477
           G ++G+G N   QLG  T+     PT ++
Sbjct: 205 GTIWGWGANGYGQLGDGTMTESSIPTPVY 233



 Score = 72.0 bits (175), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 80/327 (24%), Positives = 129/327 (39%), Gaps = 65/327 (19%)

Query: 95  RFLQSVEHSSDIVETSAGNMQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVS 153
           +F   V+   D+V  +AG         H L + S+ +V++ G++  G LG G    +   
Sbjct: 77  KFAIQVKGLEDVVSIAAG-------WEHNLAVKSDGTVWAWGNNRFGQLGDGTNENRN-- 127

Query: 154 FTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEAL 213
            T +   +   V ++ A   H+  +   G V+  G+N     G   T    ++P  V+ L
Sbjct: 128 -TPVKVKTIKDVTEIDAGFYHSIALQSDGTVWVWGNNELDQLGD-GTKSDAYKPMQVQGL 185

Query: 214 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 273
             V    V+ G +    L   G +   G+N +GQLG G   +   P    P+ +    V 
Sbjct: 186 NNVVA--VSGGNHHNLVLKADGTIWGWGANGYGQLGDGTMTESSIP---TPVYDFNGAVF 240

Query: 274 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQT---------------- 317
           IA+G +Y +AV  +G ++ +G  +   LG+G Q +   P  I                  
Sbjct: 241 IASGNNYNVAVKADGSIWGWGMNTYGQLGNGTQTNSKIPIRINGLNNSVSIATGGYHALI 300

Query: 318 -----------FRRKG----------------IH----VVRVSAGDEHVVALDSSGYVYT 346
                      + R G                +H    VV ++AG  H +AL   G ++ 
Sbjct: 301 LQQDGTVLSMGYNRTGQLGTGATSNYQYTTLKVHGLSDVVSIAAGYYHSLALKKDGTIWA 360

Query: 347 WGKGYCGALGHGDEIDKTLPEPLSSLK 373
           WG    G LG G    K LP  LS +K
Sbjct: 361 WGNNEYGQLGDGTLNYKKLP-ILSQIK 386


>gi|388454036|ref|NP_001252560.1| serine/threonine-protein kinase Nek9 [Macaca mulatta]
 gi|387539926|gb|AFJ70590.1| serine/threonine-protein kinase Nek9 [Macaca mulatta]
          Length = 979

 Score =  105 bits (262), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 82/275 (29%), Positives = 126/275 (45%), Gaps = 21/275 (7%)

Query: 207 PRLVEALK-GVPCKQVTAGLNFTGFLTIRGHVHTC-----GSNTHGQLGHGDTLDRPTPK 260
           P+ ++ +K G   +QV AG      +T+   ++T      G+  HGQLGHGD      PK
Sbjct: 359 PQKLDVIKSGCSARQVCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDKASYRQPK 418

Query: 261 SIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH--DELQPRAIQTF 318
            +  L+   ++ Q++ G  + + VT  G +Y+FGS    C+G  +    + L+P  +  F
Sbjct: 419 HVEKLQG-KAIHQVSCGDDFTVCVTDEGQLYAFGSDYYGCMGVDKVAGPEVLEPMQLNFF 477

Query: 319 RRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAV 378
               +   +VS GD HVV L  +  VY+WG G  G LG   E D   P+ +   K+ + V
Sbjct: 478 LSNPVE--QVSCGDNHVVVLTRNKEVYSWGCGEYGRLGLDSEEDYYTPQKVDVPKALIIV 535

Query: 379 QVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD--RGVSDKVLRPRI--------LDSLR 428
            V      TF+L  +G V   G   F  LG      G+ +      +           L 
Sbjct: 536 AVQCGCDGTFLLTQSGKVLACGLNEFNKLGLNQCMSGIINHEAYHEVPYTTSFTLAKQLS 595

Query: 429 AHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 463
            + +  I+ G  HT  + +RGRL  FG N+  QLG
Sbjct: 596 FYKIRTIAPGKTHTAAIDERGRLLTFGCNKCGQLG 630



 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 76/307 (24%), Positives = 128/307 (41%), Gaps = 40/307 (13%)

Query: 115 QITTGRYHTLLISNS-SVFSCGSSLCGVLG----HGPETTQCVSFTRINFPSAAHVVQVS 169
           Q++ G   T+ +++   +++ GS   G +G     GPE  + +   ++NF  +  V QVS
Sbjct: 430 QVSCGDDFTVCVTDEGQLYAFGSDYYGCMGVDKVAGPEVLEPM---QLNFFLSNPVEQVS 486

Query: 170 ASENHAAFVLQSGQVFTCGDNSSFCCGHR-----DTNRPIFRPRLVEALKGVPCKQVTAG 224
             +NH   + ++ +V++ G      CG       D+    + P+ V+  K +    V  G
Sbjct: 487 CGDNHVVVLTRNKEVYSWG------CGEYGRLGLDSEEDYYTPQKVDVPKALIIVAVQCG 540

Query: 225 LNFTGFLTIRGHVHTCGSNTHGQLG----------HGDTLDRPTPKSIAPLEEVG--SVV 272
            + T  LT  G V  CG N   +LG          H    + P   S    +++    + 
Sbjct: 541 CDGTFLLTQSGKVLACGLNEFNKLGLNQCMSGIINHEAYHEVPYTTSFTLAKQLSFYKIR 600

Query: 273 QIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGD 332
            IA G ++  A+   G + +FG      LG G     L    +      G  V+RVS GD
Sbjct: 601 TIAPGKTHTAAIDERGRLLTFGCNKCGQLGVGNYKKRLGINLLGG-PLGGKQVIRVSCGD 659

Query: 333 EHVVALDSSGYVYTWGKGYCGALG-------HGDEIDKTLPEPLSSLKSHLAVQVCARKR 385
           E  +A     +++ WG G  G L        HG +I  + P P+     H+    C R  
Sbjct: 660 EFTIAATDDNHIFAWGNGGNGRLAMTPTERPHGSDICTSWPRPIFGSLHHVPDLSC-RGW 718

Query: 386 KTFVLVD 392
            T ++V+
Sbjct: 719 HTILIVE 725



 Score = 68.9 bits (167), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 46/164 (28%), Positives = 74/164 (45%), Gaps = 6/164 (3%)

Query: 320 RKGIHVVRVSAGDEHVVALDSSGYVYTW-----GKGYCGALGHGDEIDKTLPEPLSSLKS 374
           + G    +V AG+ H   +     +YTW     G    G LGHGD+     P+ +  L+ 
Sbjct: 366 KSGCSARQVCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDKASYRQPKHVEKLQG 425

Query: 375 HLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQ 434
               QV      T  + D G +Y FG   +G +G  D+    +VL P  L+   ++ V Q
Sbjct: 426 KAIHQVSCGDDFTVCVTDEGQLYAFGSDYYGCMGV-DKVAGPEVLEPMQLNFFLSNPVEQ 484

Query: 435 ISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFI 478
           +S G  H VV+T    ++ +G  E  +LG D+      P ++ +
Sbjct: 485 VSCGDNHVVVLTRNKEVYSWGCGEYGRLGLDSEEDYYTPQKVDV 528



 Score = 68.9 bits (167), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 81/375 (21%), Positives = 146/375 (38%), Gaps = 28/375 (7%)

Query: 98  QSVEHSSDIVETSAGNMQITTGRYHTLLIS-NSSVFSC-----GSSLCGVLGHGPETTQC 151
           +S     D++++     Q+  G  H  +++    +++      G+ L G LGHG + +  
Sbjct: 356 KSTPQKLDVIKSGCSARQVCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDKASY- 414

Query: 152 VSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRP-IFRPRLV 210
                +       + QVS  ++    V   GQ++  G +   C G      P +  P  +
Sbjct: 415 RQPKHVEKLQGKAIHQVSCGDDFTVCVTDEGQLYAFGSDYYGCMGVDKVAGPEVLEPMQL 474

Query: 211 EALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSI-APLEEVG 269
                 P +QV+ G N    LT    V++ G   +G+LG     D  TP+ +  P   + 
Sbjct: 475 NFFLSNPVEQVSCGDNHVVVLTRNKEVYSWGCGEYGRLGLDSEEDYYTPQKVDVPKALII 534

Query: 270 SVVQIAAGPSYMLAVTGNGVVYSFGS----GSNFCL----GHGEQHDELQPRAIQTFRRK 321
             VQ     +++L  +G  +          G N C+     H   H+     +    ++ 
Sbjct: 535 VAVQCGCDGTFLLTQSGKVLACGLNEFNKLGLNQCMSGIINHEAYHEVPYTTSFTLAKQL 594

Query: 322 GIHVVR-VSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLS-SLKSHLAVQ 379
             + +R ++ G  H  A+D  G + T+G   CG LG G+   +     L   L     ++
Sbjct: 595 SFYKIRTIAPGKTHTAAIDERGRLLTFGCNKCGQLGVGNYKKRLGINLLGGPLGGKQVIR 654

Query: 380 VCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD------RGVSDKVLRPRILDSLRAHHVS 433
           V      T    D   ++ +G  G G L            +     RP I  SL  HHV 
Sbjct: 655 VSCGDEFTIAATDDNHIFAWGNGGNGRLAMTPTERPHGSDICTSWPRP-IFGSL--HHVP 711

Query: 434 QISTGLYHTVVVTDR 448
            +S   +HT+++ ++
Sbjct: 712 DLSCRGWHTILIVEK 726



 Score = 64.7 bits (156), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 96/381 (25%), Positives = 154/381 (40%), Gaps = 47/381 (12%)

Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 179
           R  T+  +  +V +  +S   V G G  T Q +   +    S     QV A   H A V 
Sbjct: 330 RSSTVTEAPIAVVTSRTSEVYVWGGGKSTPQKLDVIK----SGCSARQVCAGNTHFAVVT 385

Query: 180 QSGQVFTC-----GDNSSFCCGHRDTNRPIFR-PRLVEALKGVPCKQVTAGLNFTGFLTI 233
              +++T      G       GH D  +  +R P+ VE L+G    QV+ G +FT  +T 
Sbjct: 386 VEKELYTWVNMQGGTKLHGQLGHGD--KASYRQPKHVEKLQGKAIHQVSCGDDFTVCVTD 443

Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPT-PKSIAPLE----EVGSVVQIAAGPSYMLAVTGNG 288
            G ++  GS+ +G +G    +D+   P+ + P++        V Q++ G ++++ +T N 
Sbjct: 444 EGQLYAFGSDYYGCMG----VDKVAGPEVLEPMQLNFFLSNPVEQVSCGDNHVVVLTRNK 499

Query: 289 VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 348
            VYS+G G    LG   + D   P+ +     K + +V V  G +    L  SG V   G
Sbjct: 500 EVYSWGCGEYGRLGLDSEEDYYTPQKVDV--PKALIIVAVQCGCDGTFLLTQSGKVLACG 557

Query: 349 KGYCGALGHGD------------EIDKTLPEPLSSLKSHLAVQVCAR-KRKTFVLVDTGS 395
                 LG               E+  T    L+   S   ++  A  K  T  + + G 
Sbjct: 558 LNEFNKLGLNQCMSGIINHEAYHEVPYTTSFTLAKQLSFYKIRTIAPGKTHTAAIDERGR 617

Query: 396 VYGFGWMGFGSLGFPDRGVSDKVLRPRIL-DSLRAHHVSQISTGLYHTVVVTDRGRLFGF 454
           +  FG    G LG    G   K L   +L   L    V ++S G   T+  TD   +F +
Sbjct: 618 LLTFGCNKCGQLGV---GNYKKRLGINLLGGPLGGKQVIRVSCGDEFTIAATDDNHIFAW 674

Query: 455 GDNERAQLGHDTLRGCLEPTE 475
           G+    +L        + PTE
Sbjct: 675 GNGGNGRLA-------MTPTE 688



 Score = 49.3 bits (116), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 43/147 (29%), Positives = 65/147 (44%), Gaps = 17/147 (11%)

Query: 335 VVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHL-AVQVCARKRKTFVLVDT 393
            V    +  VY WG G            K+ P+ L  +KS   A QVCA      V+   
Sbjct: 340 AVVTSRTSEVYVWGGG------------KSTPQKLDVIKSGCSARQVCAGNTHFAVVTVE 387

Query: 394 GSVYGFGWMGFGSLGFPDRGVSDKV--LRPRILDSLRAHHVSQISTGLYHTVVVTDRGRL 451
             +Y +  M  G+      G  DK    +P+ ++ L+   + Q+S G   TV VTD G+L
Sbjct: 388 KELYTWVNMQGGTKLHGQLGHGDKASYRQPKHVEKLQGKAIHQVSCGDDFTVCVTDEGQL 447

Query: 452 FGFGDNERAQLGHDTLRG--CLEPTEI 476
           + FG +    +G D + G   LEP ++
Sbjct: 448 YAFGSDYYGCMGVDKVAGPEVLEPMQL 474


>gi|403264692|ref|XP_003924608.1| PREDICTED: serine/threonine-protein kinase Nek9 [Saimiri
           boliviensis boliviensis]
          Length = 983

 Score =  105 bits (262), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 82/275 (29%), Positives = 126/275 (45%), Gaps = 21/275 (7%)

Query: 207 PRLVEALK-GVPCKQVTAGLNFTGFLTIRGHVHTC-----GSNTHGQLGHGDTLDRPTPK 260
           P+ ++ +K G   +QV AG      +T+   ++T      G+  HGQLGHGD      PK
Sbjct: 359 PQKLDVIKSGCSARQVCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDKASYRQPK 418

Query: 261 SIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH--DELQPRAIQTF 318
            +  L+   ++ Q++ G  + + VT  G +Y+FGS    C+G  +    + L+P  +  F
Sbjct: 419 HVEKLQG-KAIHQVSCGDDFTVCVTDEGQLYAFGSDYYGCMGVDKVAGPEVLEPMQLNFF 477

Query: 319 RRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAV 378
               +   +VS GD HVV L  +  VY+WG G  G LG   E D   P+ +   K+ + V
Sbjct: 478 LSNPVE--QVSCGDNHVVVLTRNKEVYSWGCGEYGRLGLDSEEDYYTPQKVDVPKALVIV 535

Query: 379 QVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD--RGVSDKVLRPRIL--------DSLR 428
            V      TF+L  +G V   G   F  LG      G+ +      +           L 
Sbjct: 536 AVQCGCDGTFLLTQSGKVLACGLNEFNKLGLNQCMSGIINHEAYHEVTYTTSFTLAKQLS 595

Query: 429 AHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 463
            + +  I+ G  HT  + +RGRL  FG N+  QLG
Sbjct: 596 FYKIRTIAPGKTHTAAIDERGRLLTFGCNKCGQLG 630



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 75/307 (24%), Positives = 126/307 (41%), Gaps = 40/307 (13%)

Query: 115 QITTGRYHTLLISNS-SVFSCGSSLCGVLG----HGPETTQCVSFTRINFPSAAHVVQVS 169
           Q++ G   T+ +++   +++ GS   G +G     GPE  + +   ++NF  +  V QVS
Sbjct: 430 QVSCGDDFTVCVTDEGQLYAFGSDYYGCMGVDKVAGPEVLEPM---QLNFFLSNPVEQVS 486

Query: 170 ASENHAAFVLQSGQVFTCGDNSSFCCGHR-----DTNRPIFRPRLVEALKGVPCKQVTAG 224
             +NH   + ++ +V++ G      CG       D+    + P+ V+  K +    V  G
Sbjct: 487 CGDNHVVVLTRNKEVYSWG------CGEYGRLGLDSEEDYYTPQKVDVPKALVIVAVQCG 540

Query: 225 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLD------------RPTPKSIAPLEEVGSVV 272
            + T  LT  G V  CG N   +LG    +               T  ++A       + 
Sbjct: 541 CDGTFLLTQSGKVLACGLNEFNKLGLNQCMSGIINHEAYHEVTYTTSFTLAKQLSFYKIR 600

Query: 273 QIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGD 332
            IA G ++  A+   G + +FG      LG G     L    +      G  V+RVS GD
Sbjct: 601 TIAPGKTHTAAIDERGRLLTFGCNKCGQLGVGNYKKRLGINLLGG-PLGGKQVIRVSCGD 659

Query: 333 EHVVALDSSGYVYTWGKGYCGALG-------HGDEIDKTLPEPLSSLKSHLAVQVCARKR 385
           E  +A     +++ WG G  G L        HG +I  + P P+     H+    C R  
Sbjct: 660 EFTIAATDDNHIFAWGNGGNGRLAMTPTERPHGSDICTSWPRPIFGSLHHVPDLSC-RGW 718

Query: 386 KTFVLVD 392
            T ++V+
Sbjct: 719 HTILIVE 725



 Score = 69.7 bits (169), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 82/375 (21%), Positives = 146/375 (38%), Gaps = 28/375 (7%)

Query: 98  QSVEHSSDIVETSAGNMQITTGRYHTLLIS-NSSVFSC-----GSSLCGVLGHGPETTQC 151
           +S     D++++     Q+  G  H  +++    +++      G+ L G LGHG + +  
Sbjct: 356 KSTPQKLDVIKSGCSARQVCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDKASY- 414

Query: 152 VSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRP-IFRPRLV 210
                +       + QVS  ++    V   GQ++  G +   C G      P +  P  +
Sbjct: 415 RQPKHVEKLQGKAIHQVSCGDDFTVCVTDEGQLYAFGSDYYGCMGVDKVAGPEVLEPMQL 474

Query: 211 EALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSI-APLEEVG 269
                 P +QV+ G N    LT    V++ G   +G+LG     D  TP+ +  P   V 
Sbjct: 475 NFFLSNPVEQVSCGDNHVVVLTRNKEVYSWGCGEYGRLGLDSEEDYYTPQKVDVPKALVI 534

Query: 270 SVVQIAAGPSYMLAVTGNGVVYSFGS----GSNFCL----GHGEQHDELQPRAIQTFRRK 321
             VQ     +++L  +G  +          G N C+     H   H+     +    ++ 
Sbjct: 535 VAVQCGCDGTFLLTQSGKVLACGLNEFNKLGLNQCMSGIINHEAYHEVTYTTSFTLAKQL 594

Query: 322 GIHVVR-VSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLS-SLKSHLAVQ 379
             + +R ++ G  H  A+D  G + T+G   CG LG G+   +     L   L     ++
Sbjct: 595 SFYKIRTIAPGKTHTAAIDERGRLLTFGCNKCGQLGVGNYKKRLGINLLGGPLGGKQVIR 654

Query: 380 VCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD------RGVSDKVLRPRILDSLRAHHVS 433
           V      T    D   ++ +G  G G L            +     RP I  SL  HHV 
Sbjct: 655 VSCGDEFTIAATDDNHIFAWGNGGNGRLAMTPTERPHGSDICTSWPRP-IFGSL--HHVP 711

Query: 434 QISTGLYHTVVVTDR 448
            +S   +HT+++ ++
Sbjct: 712 DLSCRGWHTILIVEK 726



 Score = 68.9 bits (167), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 46/164 (28%), Positives = 74/164 (45%), Gaps = 6/164 (3%)

Query: 320 RKGIHVVRVSAGDEHVVALDSSGYVYTW-----GKGYCGALGHGDEIDKTLPEPLSSLKS 374
           + G    +V AG+ H   +     +YTW     G    G LGHGD+     P+ +  L+ 
Sbjct: 366 KSGCSARQVCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDKASYRQPKHVEKLQG 425

Query: 375 HLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQ 434
               QV      T  + D G +Y FG   +G +G  D+    +VL P  L+   ++ V Q
Sbjct: 426 KAIHQVSCGDDFTVCVTDEGQLYAFGSDYYGCMGV-DKVAGPEVLEPMQLNFFLSNPVEQ 484

Query: 435 ISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFI 478
           +S G  H VV+T    ++ +G  E  +LG D+      P ++ +
Sbjct: 485 VSCGDNHVVVLTRNKEVYSWGCGEYGRLGLDSEEDYYTPQKVDV 528



 Score = 65.1 bits (157), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 96/381 (25%), Positives = 154/381 (40%), Gaps = 47/381 (12%)

Query: 120 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 179
           R  T+  +  +V +  +S   V G G  T Q +   +    S     QV A   H A V 
Sbjct: 330 RSSTVTEAPIAVVTSRTSEVYVWGGGKSTPQKLDVIK----SGCSARQVCAGNTHFAVVT 385

Query: 180 QSGQVFTC-----GDNSSFCCGHRDTNRPIFR-PRLVEALKGVPCKQVTAGLNFTGFLTI 233
              +++T      G       GH D  +  +R P+ VE L+G    QV+ G +FT  +T 
Sbjct: 386 VEKELYTWVNMQGGTKLHGQLGHGD--KASYRQPKHVEKLQGKAIHQVSCGDDFTVCVTD 443

Query: 234 RGHVHTCGSNTHGQLGHGDTLDRPT-PKSIAPLE----EVGSVVQIAAGPSYMLAVTGNG 288
            G ++  GS+ +G +G    +D+   P+ + P++        V Q++ G ++++ +T N 
Sbjct: 444 EGQLYAFGSDYYGCMG----VDKVAGPEVLEPMQLNFFLSNPVEQVSCGDNHVVVLTRNK 499

Query: 289 VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 348
            VYS+G G    LG   + D   P+ +     K + +V V  G +    L  SG V   G
Sbjct: 500 EVYSWGCGEYGRLGLDSEEDYYTPQKVDV--PKALVIVAVQCGCDGTFLLTQSGKVLACG 557

Query: 349 KGYCGALGHGD------------EIDKTLPEPLSSLKSHLAVQVCAR-KRKTFVLVDTGS 395
                 LG               E+  T    L+   S   ++  A  K  T  + + G 
Sbjct: 558 LNEFNKLGLNQCMSGIINHEAYHEVTYTTSFTLAKQLSFYKIRTIAPGKTHTAAIDERGR 617

Query: 396 VYGFGWMGFGSLGFPDRGVSDKVLRPRIL-DSLRAHHVSQISTGLYHTVVVTDRGRLFGF 454
           +  FG    G LG    G   K L   +L   L    V ++S G   T+  TD   +F +
Sbjct: 618 LLTFGCNKCGQLGV---GNYKKRLGINLLGGPLGGKQVIRVSCGDEFTIAATDDNHIFAW 674

Query: 455 GDNERAQLGHDTLRGCLEPTE 475
           G+    +L        + PTE
Sbjct: 675 GNGGNGRLA-------MTPTE 688



 Score = 49.3 bits (116), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 43/147 (29%), Positives = 65/147 (44%), Gaps = 17/147 (11%)

Query: 335 VVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHL-AVQVCARKRKTFVLVDT 393
            V    +  VY WG G            K+ P+ L  +KS   A QVCA      V+   
Sbjct: 340 AVVTSRTSEVYVWGGG------------KSTPQKLDVIKSGCSARQVCAGNTHFAVVTVE 387

Query: 394 GSVYGFGWMGFGSLGFPDRGVSDKV--LRPRILDSLRAHHVSQISTGLYHTVVVTDRGRL 451
             +Y +  M  G+      G  DK    +P+ ++ L+   + Q+S G   TV VTD G+L
Sbjct: 388 KELYTWVNMQGGTKLHGQLGHGDKASYRQPKHVEKLQGKAIHQVSCGDDFTVCVTDEGQL 447

Query: 452 FGFGDNERAQLGHDTLRG--CLEPTEI 476
           + FG +    +G D + G   LEP ++
Sbjct: 448 YAFGSDYYGCMGVDKVAGPEVLEPMQL 474


>gi|426377519|ref|XP_004055512.1| PREDICTED: serine/threonine-protein kinase Nek9 [Gorilla gorilla
           gorilla]
 gi|18997185|gb|AAL05428.1| NIMA-related kinase Nek8 [Homo sapiens]
 gi|119601626|gb|EAW81220.1| NIMA (never in mitosis gene a)- related kinase 9, isoform CRA_a
           [Homo sapiens]
 gi|119601628|gb|EAW81222.1| NIMA (never in mitosis gene a)- related kinase 9, isoform CRA_a
           [Homo sapiens]
 gi|208965282|dbj|BAG72655.1| NIMA (never in mitosis gene a)- related kinase 9 [synthetic
           construct]
          Length = 979

 Score =  105 bits (262), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 82/275 (29%), Positives = 126/275 (45%), Gaps = 21/275 (7%)

Query: 207 PRLVEALK-GVPCKQVTAGLNFTGFLTIRGHVHTC-----GSNTHGQLGHGDTLDRPTPK 260
           P+ ++ +K G   +QV AG      +T+   ++T      G+  HGQLGHGD      PK
Sbjct: 359 PQKLDVIKSGCSARQVCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDKASYRQPK 418

Query: 261 SIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH--DELQPRAIQTF 318
            +  L+   ++ Q++ G  + + VT  G +Y+FGS    C+G  +    + L+P  +  F
Sbjct: 419 HVEKLQG-KAIHQVSCGDDFTVCVTDEGQLYAFGSDYYGCMGVDKVAGPEVLEPMQLNFF 477

Query: 319 RRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAV 378
               +   +VS GD HVV L  +  VY+WG G  G LG   E D   P+ +   K+ + V
Sbjct: 478 LSNPVE--QVSCGDNHVVVLTRNKEVYSWGCGEYGRLGLDSEEDYYTPQKVDVPKALIIV 535

Query: 379 QVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD--RGVSDKVLRPRI--------LDSLR 428
            V      TF+L  +G V   G   F  LG      G+ +      +           L 
Sbjct: 536 AVQCGCDGTFLLTQSGKVLACGLNEFNKLGLNQCMSGIINHEAYHEVPYTTSFTLAKQLS 595

Query: 429 AHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 463
            + +  I+ G  HT  + +RGRL  FG N+  QLG
Sbjct: 596 FYKIRTIAPGKTHTAAIDERGRLLTFGCNKCGQLG 630



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 76/307 (24%), Positives = 128/307 (41%), Gaps = 40/307 (13%)

Query: 115 QITTGRYHTLLISNS-SVFSCGSSLCGVLG----HGPETTQCVSFTRINFPSAAHVVQVS 169
           Q++ G   T+ +++   +++ GS   G +G     GPE  + +   ++NF  +  V QVS
Sbjct: 430 QVSCGDDFTVCVTDEGQLYAFGSDYYGCMGVDKVAGPEVLEPM---QLNFFLSNPVEQVS 486

Query: 170 ASENHAAFVLQSGQVFTCGDNSSFCCGHR-----DTNRPIFRPRLVEALKGVPCKQVTAG 224
             +NH   + ++ +V++ G      CG       D+    + P+ V+  K +    V  G
Sbjct: 487 CGDNHVVVLTRNKEVYSWG------CGEYGRLGLDSEEDYYTPQKVDVPKALIIVAVQCG 540

Query: 225 LNFTGFLTIRGHVHTCGSNTHGQLG----------HGDTLDRPTPKSIAPLEEVG--SVV 272
            + T  LT  G V  CG N   +LG          H    + P   S    +++    + 
Sbjct: 541 CDGTFLLTQSGKVLACGLNEFNKLGLNQCMSGIINHEAYHEVPYTTSFTLAKQLSFYKIR 600

Query: 273 QIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGD 332
            IA G ++  A+   G + +FG      LG G     L    +      G  V+RVS GD
Sbjct: 601 TIAPGKTHTAAIDERGRLLTFGCNKCGQLGVGNYKKRLGINLLGG-PLGGKQVIRVSCGD 659

Query: 333 EHVVALDSSGYVYTWGKGYCGALG-------HGDEIDKTLPEPLSSLKSHLAVQVCARKR 385
           E  +A     +++ WG G  G L        HG +I  + P P+     H+    C R  
Sbjct: 660 EFTIAATDDNHIFAWGNGGNGRLAMTPTERPHGSDICTSWPRPIFGSLHHVPDLSC-RGW 718

Query: 386 KTFVLVD 392
            T ++V+
Sbjct: 719 HTILIVE 725



 Score = 68.9 bits (167), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 46/164 (28%), Positives = 74/164 (45%), Gaps = 6/164 (3%)

Query: 320 RKGIHVVRVSAGDEHVVALDSSGYVYTW-----GKGYCGALGHGDEIDKTLPEPLSSLKS 374
           + G    +V AG+ H   +     +YTW     G    G LGHGD+     P+ +  L+ 
Sbjct: 366 KSGCSARQVCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDKASYRQPKHVEKLQG 425

Query: 375 HLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQ 434
               QV      T  + D G +Y FG   +G +G  D+    +VL P  L+   ++ V Q
Sbjct: 426 KAIHQVSCGDDFTVCVTDEGQLYAFGSDYYGCMGV-DKVAGPEVLEPMQLNFFLSNPVEQ 484

Query: 435 ISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFI 478
           +S G  H VV+T    ++ +G  E  +LG D+      P ++ +
Sbjct: 485 VSCGDNHVVVLTRNKEVYSWGCGEYGRLGLDSEEDYYTPQKVDV 528



 Score = 68.6 bits (166), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 81/375 (21%), Positives = 146/375 (38%), Gaps = 28/375 (7%)

Query: 98  QSVEHSSDIVETSAGNMQITTGRYHTLLIS-NSSVFSC-----GSSLCGVLGHGPETTQC 151
           +S     D++++     Q+  G  H  +++    +++      G+ L G LGHG + +  
Sbjct: 356 KSTPQKLDVIKSGCSARQVCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDKASY- 414

Query: 152 VSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRP-IFRPRLV 210
                +       + QVS  ++    V   GQ++  G +   C G      P +  P  +
Sbjct: 415 RQPKHVEKLQGKAIHQVSCGDDFTVCVTDEGQLYAFGSDYYGCMGVDKVAGPEVLEPMQL 474

Query: 211 EALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSI-APLEEVG 269
                 P +QV+ G N    LT    V++ G   +G+LG     D  TP+ +  P   + 
Sbjct: 475 NFFLSNPVEQVSCGDNHVVVLTRNKEVYSWGCGEYGRLGLDSEEDYYTPQKVDVPKALII 534

Query: 270 SVVQIAAGPSYMLAVTGNGVVYSFGS----GSNFCL----GHGEQHDELQPRAIQTFRRK 321
             VQ     +++L  +G  +          G N C+     H   H+     +    ++ 
Sbjct: 535 VAVQCGCDGTFLLTQSGKVLACGLNEFNKLGLNQCMSGIINHEAYHEVPYTTSFTLAKQL 594

Query: 322 GIHVVR-VSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLS-SLKSHLAVQ 379
             + +R ++ G  H  A+D  G + T+G   CG LG G+   +     L   L     ++
Sbjct: 595 SFYKIRTIAPGKTHTAAIDERGRLLTFGCNKCGQLGVGNYKKRLGINLLGGPLGGKQVIR 654

Query: 380 VCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD------RGVSDKVLRPRILDSLRAHHVS 433
           V      T    D   ++ +G  G G L            +     RP I  SL  HHV 
Sbjct: 655 VSCGDEFTIAATDDNHIFAWGNGGNGRLAMTPTERPHGSDICTSWPRP-IFGSL--HHVP 711

Query: 434 QISTGLYHTVVVTDR 448
            +S   +HT+++ ++
Sbjct: 712 DLSCRGWHTILIVEK 726



 Score = 64.7 bits (156), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 97/388 (25%), Positives = 155/388 (39%), Gaps = 47/388 (12%)

Query: 113 NMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 172
           N      R  T+  +  +V +  +S   V G G  T Q +   +    S     QV A  
Sbjct: 323 NAPTKRPRSSTVTEAPIAVVTSRTSEVYVWGGGKSTPQKLDVIK----SGCSARQVCAGN 378

Query: 173 NHAAFVLQSGQVFTC-----GDNSSFCCGHRDTNRPIFR-PRLVEALKGVPCKQVTAGLN 226
            H A V    +++T      G       GH D  +  +R P+ VE L+G    QV+ G +
Sbjct: 379 THFAVVTVEKELYTWVNMQGGTKLHGQLGHGD--KASYRQPKHVEKLQGKAIHQVSCGDD 436

Query: 227 FTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPT-PKSIAPLE----EVGSVVQIAAGPSYM 281
           FT  +T  G ++  GS+ +G +G    +D+   P+ + P++        V Q++ G +++
Sbjct: 437 FTVCVTDEGQLYAFGSDYYGCMG----VDKVAGPEVLEPMQLNFFLSNPVEQVSCGDNHV 492

Query: 282 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 341
           + +T N  VYS+G G    LG   + D   P+ +     K + +V V  G +    L  S
Sbjct: 493 VVLTRNKEVYSWGCGEYGRLGLDSEEDYYTPQKVDV--PKALIIVAVQCGCDGTFLLTQS 550

Query: 342 GYVYTWGKGYCGALGHGD------------EIDKTLPEPLSSLKSHLAVQVCAR-KRKTF 388
           G V   G      LG               E+  T    L+   S   ++  A  K  T 
Sbjct: 551 GKVLACGLNEFNKLGLNQCMSGIINHEAYHEVPYTTSFTLAKQLSFYKIRTIAPGKTHTA 610

Query: 389 VLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRIL-DSLRAHHVSQISTGLYHTVVVTD 447
            + + G +  FG    G LG    G   K L   +L   L    V ++S G   T+  TD
Sbjct: 611 AIDERGRLLTFGCNKCGQLGV---GNYKKRLGINLLGGPLGGKQVIRVSCGDEFTIAATD 667

Query: 448 RGRLFGFGDNERAQLGHDTLRGCLEPTE 475
              +F +G+    +L        + PTE
Sbjct: 668 DNHIFAWGNGGNGRLA-------MTPTE 688



 Score = 49.3 bits (116), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 43/147 (29%), Positives = 65/147 (44%), Gaps = 17/147 (11%)

Query: 335 VVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHL-AVQVCARKRKTFVLVDT 393
            V    +  VY WG G            K+ P+ L  +KS   A QVCA      V+   
Sbjct: 340 AVVTSRTSEVYVWGGG------------KSTPQKLDVIKSGCSARQVCAGNTHFAVVTVE 387

Query: 394 GSVYGFGWMGFGSLGFPDRGVSDKV--LRPRILDSLRAHHVSQISTGLYHTVVVTDRGRL 451
             +Y +  M  G+      G  DK    +P+ ++ L+   + Q+S G   TV VTD G+L
Sbjct: 388 KELYTWVNMQGGTKLHGQLGHGDKASYRQPKHVEKLQGKAIHQVSCGDDFTVCVTDEGQL 447

Query: 452 FGFGDNERAQLGHDTLRG--CLEPTEI 476
           + FG +    +G D + G   LEP ++
Sbjct: 448 YAFGSDYYGCMGVDKVAGPEVLEPMQL 474


  Database: nr
    Posted date:  Mar 3, 2013 10:45 PM
  Number of letters in database: 999,999,864
  Number of sequences in database:  2,912,245
  
  Database: /local_scratch/syshi//blastdatabase/nr.01
    Posted date:  Mar 3, 2013 10:52 PM
  Number of letters in database: 999,999,666
  Number of sequences in database:  2,912,720
  
  Database: /local_scratch/syshi//blastdatabase/nr.02
    Posted date:  Mar 3, 2013 10:58 PM
  Number of letters in database: 999,999,938
  Number of sequences in database:  3,014,250
  
  Database: /local_scratch/syshi//blastdatabase/nr.03
    Posted date:  Mar 3, 2013 11:03 PM
  Number of letters in database: 999,999,780
  Number of sequences in database:  2,805,020
  
  Database: /local_scratch/syshi//blastdatabase/nr.04
    Posted date:  Mar 3, 2013 11:08 PM
  Number of letters in database: 999,999,551
  Number of sequences in database:  2,816,253
  
  Database: /local_scratch/syshi//blastdatabase/nr.05
    Posted date:  Mar 3, 2013 11:13 PM
  Number of letters in database: 999,999,897
  Number of sequences in database:  2,981,387
  
  Database: /local_scratch/syshi//blastdatabase/nr.06
    Posted date:  Mar 3, 2013 11:18 PM
  Number of letters in database: 999,999,649
  Number of sequences in database:  2,911,476
  
  Database: /local_scratch/syshi//blastdatabase/nr.07
    Posted date:  Mar 3, 2013 11:24 PM
  Number of letters in database: 999,999,452
  Number of sequences in database:  2,920,260
  
  Database: /local_scratch/syshi//blastdatabase/nr.08
    Posted date:  Mar 3, 2013 11:25 PM
  Number of letters in database: 64,230,274
  Number of sequences in database:  189,558
  
Lambda     K      H
   0.321    0.137    0.418 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,834,355,307
Number of Sequences: 23463169
Number of extensions: 335216858
Number of successful extensions: 797049
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 3513
Number of HSP's successfully gapped in prelim test: 1773
Number of HSP's that attempted gapping in prelim test: 703391
Number of HSP's gapped (non-prelim): 31450
length of query: 488
length of database: 8,064,228,071
effective HSP length: 147
effective length of query: 341
effective length of database: 8,910,109,524
effective search space: 3038347347684
effective search space used: 3038347347684
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 79 (35.0 bits)