BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 011359
(488 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 171 bits (434), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 98/271 (36%), Positives = 156/271 (57%), Gaps = 10/271 (3%)
Query: 171 ADEHTVDLSQLFLGLRFAHGAHSRLYHGIYKDEPVAVKIIRIPDDDENETLAARLEKQFN 230
D+ + L + + G+ ++ + VAVKI+ E + A R+ +F
Sbjct: 29 GDDMDIPWCDLNIKEKIGAGSFGTVHRAEWHGSDVAVKILM-----EQDFHAERV-NEFL 82
Query: 231 REVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKL-EHKTLPLPKLIAI 289
REVA++ RL +PN++ F+ A +PP ++TEYLS GSL LHK + L + +++
Sbjct: 83 REVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSM 142
Query: 290 ALDIARGMEYIHSQG--VIHRDLKPENVLIDQEFHLKIADFGIACEEVYCDALSDDP-GT 346
A D+A+GM Y+H++ ++HRDLK N+L+D+++ +K+ DFG++ + S GT
Sbjct: 143 AYDVAKGMNYLHNRNPPIVHRDLKSPNLLVDKKYTVKVCDFGLSRLKASXFLXSKXAAGT 202
Query: 347 YRWMAPEMIKHKSYGRKVDVYSFGLILWEMVAGTIPYEEMNPIQAAFAVVNKNLRPAIPG 406
WMAPE+++ + K DVYSFG+ILWE+ P+ +NP Q AV K R IP
Sbjct: 203 PEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPAQVVAAVGFKCKRLEIPR 262
Query: 407 DCPPAMAALIEQCWSLQPDKRPEFWHIVKVL 437
+ P +AA+IE CW+ +P KRP F I+ +L
Sbjct: 263 NLNPQVAAIIEGCWTNEPWKRPSFATIMDLL 293
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 171 bits (432), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 97/271 (35%), Positives = 156/271 (57%), Gaps = 10/271 (3%)
Query: 171 ADEHTVDLSQLFLGLRFAHGAHSRLYHGIYKDEPVAVKIIRIPDDDENETLAARLEKQFN 230
D+ + L + + G+ ++ + VAVKI+ E + A R+ +F
Sbjct: 29 GDDMDIPWCDLNIKEKIGAGSFGTVHRAEWHGSDVAVKILM-----EQDFHAERV-NEFL 82
Query: 231 REVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKL-EHKTLPLPKLIAI 289
REVA++ RL +PN++ F+ A +PP ++TEYLS GSL LHK + L + +++
Sbjct: 83 REVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSM 142
Query: 290 ALDIARGMEYIHSQG--VIHRDLKPENVLIDQEFHLKIADFGIACEEVYCDALSDDP-GT 346
A D+A+GM Y+H++ ++HR+LK N+L+D+++ +K+ DFG++ + S GT
Sbjct: 143 AYDVAKGMNYLHNRNPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKASTFLSSKSAAGT 202
Query: 347 YRWMAPEMIKHKSYGRKVDVYSFGLILWEMVAGTIPYEEMNPIQAAFAVVNKNLRPAIPG 406
WMAPE+++ + K DVYSFG+ILWE+ P+ +NP Q AV K R IP
Sbjct: 203 PEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPAQVVAAVGFKCKRLEIPR 262
Query: 407 DCPPAMAALIEQCWSLQPDKRPEFWHIVKVL 437
+ P +AA+IE CW+ +P KRP F I+ +L
Sbjct: 263 NLNPQVAAIIEGCWTNEPWKRPSFATIMDLL 293
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 160 bits (405), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 94/279 (33%), Positives = 143/279 (51%), Gaps = 24/279 (8%)
Query: 176 VDLSQLFLGLRFAHGAHSRLYHGIYKDEPVAVKIIR-IPDDDENETLAARLEKQFNREVA 234
+D ++L L G ++Y + + VAVK R PD+D ++T+ + +E
Sbjct: 4 IDFAELTLEEIIGIGGFGKVYRAFWIGDEVAVKAARHDPDEDISQTI-----ENVRQEAK 58
Query: 235 LLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIALDIA 294
L + L +PN+I C K P C++ E+ G L L K +P L+ A+ IA
Sbjct: 59 LFAMLKHPNIIALRGVCLKEPNLCLVMEFARGGPLN---RVLSGKRIPPDILVNWAVQIA 115
Query: 295 RGMEYIHSQGV---IHRDLKPENVLIDQEFH--------LKIADFGIACEEVYCDALSDD 343
RGM Y+H + + IHRDLK N+LI Q+ LKI DFG+A E +S
Sbjct: 116 RGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREWHRTTKMSA- 174
Query: 344 PGTYRWMAPEMIKHKSYGRKVDVYSFGLILWEMVAGTIPYEEMNPIQAAFAVVNKNLRPA 403
G Y WMAPE+I+ + + DV+S+G++LWE++ G +P+ ++ + A+ V L
Sbjct: 175 AGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGLAVAYGVAMNKLALP 234
Query: 404 IPGDCPPAMAALIEQCWSLQPDKRPEFWHIVKVLEQFET 442
IP CP A L+E CW+ P RP F +L+Q T
Sbjct: 235 IPSTCPEPFAKLMEDCWNPDPHSRPSF---TNILDQLTT 270
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 149 bits (376), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 90/286 (31%), Positives = 152/286 (53%), Gaps = 19/286 (6%)
Query: 169 DAADEHTVDLSQLFLGLRFAHGAHSRLYHGIYKDEPVAVKIIRIPDDDENETLAARLEKQ 228
D++D+ + Q+ +G R G+ +Y G + + VAVK++ + + A
Sbjct: 26 DSSDDWEIPDGQITVGQRIGSGSFGTVYKGKWHGD-VAVKMLNVTAPTPQQLQA------ 78
Query: 229 FNREVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIA 288
F EV +L + + N++ F+ KP + ++T++ SL +LH +E K + KLI
Sbjct: 79 FKNEVGVLRKTRHVNILLFMGYSTKPQL-AIVTQWCEGSSLYHHLHIIETK-FEMIKLID 136
Query: 289 IALDIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIACEEVYCDA---LSDDPG 345
IA A+GM+Y+H++ +IHRDLK N+ + ++ +KI DFG+A E+ G
Sbjct: 137 IARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSG 196
Query: 346 TYRWMAPEMIKHKS---YGRKVDVYSFGLILWEMVAGTIPYEEMNP-IQAAFAVVNKNLR 401
+ WMAPE+I+ + Y + DVY+FG++L+E++ G +PY +N Q F V L
Sbjct: 197 SILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLS 256
Query: 402 P---AIPGDCPPAMAALIEQCWSLQPDKRPEFWHIVKVLEQFETSL 444
P + +CP AM L+ +C + D+RP F I+ +E SL
Sbjct: 257 PDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASIELLARSL 302
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 149 bits (375), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 90/286 (31%), Positives = 152/286 (53%), Gaps = 19/286 (6%)
Query: 169 DAADEHTVDLSQLFLGLRFAHGAHSRLYHGIYKDEPVAVKIIRIPDDDENETLAARLEKQ 228
D++D+ + Q+ +G R G+ +Y G + + VAVK++ + + A
Sbjct: 18 DSSDDWEIPDGQITVGQRIGSGSFGTVYKGKWHGD-VAVKMLNVTAPTPQQLQA------ 70
Query: 229 FNREVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIA 288
F EV +L + + N++ F+ KP + ++T++ SL +LH +E K + KLI
Sbjct: 71 FKNEVGVLRKTRHVNILLFMGYSTKPQL-AIVTQWCEGSSLYHHLHIIETK-FEMIKLID 128
Query: 289 IALDIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIACEEVYCDA---LSDDPG 345
IA A+GM+Y+H++ +IHRDLK N+ + ++ +KI DFG+A E+ G
Sbjct: 129 IARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSG 188
Query: 346 TYRWMAPEMIKHKS---YGRKVDVYSFGLILWEMVAGTIPYEEMNP-IQAAFAVVNKNLR 401
+ WMAPE+I+ + Y + DVY+FG++L+E++ G +PY +N Q F V L
Sbjct: 189 SILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLS 248
Query: 402 P---AIPGDCPPAMAALIEQCWSLQPDKRPEFWHIVKVLEQFETSL 444
P + +CP AM L+ +C + D+RP F I+ +E SL
Sbjct: 249 PDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASIELLARSL 294
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 147 bits (372), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 87/287 (30%), Positives = 152/287 (52%), Gaps = 19/287 (6%)
Query: 169 DAADEHTVDLSQLFLGLRFAHGAHSRLYHGIYKDEPVAVKIIRIPDDDENETLAARLEKQ 228
D++D+ + Q+ +G R G+ +Y G + + VAVK++ + + A
Sbjct: 14 DSSDDWEIPDGQITVGQRIGSGSFGTVYKGKWHGD-VAVKMLNVTAPTPQQLQA------ 66
Query: 229 FNREVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIA 288
F EV +L + + N++ F+ KP + ++T++ SL +LH E K + KLI
Sbjct: 67 FKNEVGVLRKTRHVNILLFMGYSTKPQL-AIVTQWCEGSSLYHHLHASETK-FEMKKLID 124
Query: 289 IALDIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIACEEVYCDA---LSDDPG 345
IA ARGM+Y+H++ +IHRDLK N+ + ++ +KI DFG+A E+ G
Sbjct: 125 IARQTARGMDYLHAKSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSG 184
Query: 346 TYRWMAPEMIKHKS---YGRKVDVYSFGLILWEMVAGTIPYEEMNPIQAAFAVVNK-NLR 401
+ WMAPE+I+ + Y + DVY+FG++L+E++ G +PY +N +V + +L
Sbjct: 185 SILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSLS 244
Query: 402 P---AIPGDCPPAMAALIEQCWSLQPDKRPEFWHIVKVLEQFETSLA 445
P + +CP M L+ +C + D+RP F I+ +E+ L+
Sbjct: 245 PDLSKVRSNCPKRMKRLMAECLKKKRDERPSFPRILAEIEELARELS 291
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 146 bits (368), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 89/286 (31%), Positives = 151/286 (52%), Gaps = 19/286 (6%)
Query: 169 DAADEHTVDLSQLFLGLRFAHGAHSRLYHGIYKDEPVAVKIIRIPDDDENETLAARLEKQ 228
D++D+ + Q+ +G R G+ +Y G + + VAVK++ + + A
Sbjct: 25 DSSDDWEIPDGQITVGQRIGSGSFGTVYKGKWHGD-VAVKMLNVTAPTPQQLQA------ 77
Query: 229 FNREVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIA 288
F EV +L + + N++ F+ KP + ++T++ SL +LH +E K + KLI
Sbjct: 78 FKNEVGVLRKTRHVNILLFMGYSTKPQL-AIVTQWCEGSSLYHHLHIIETK-FEMIKLID 135
Query: 289 IALDIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIACEEVYCDA---LSDDPG 345
IA A+GM+Y+H++ +IHRDLK N+ + ++ +KI DFG+A + G
Sbjct: 136 IARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSG 195
Query: 346 TYRWMAPEMIKHKS---YGRKVDVYSFGLILWEMVAGTIPYEEMNP-IQAAFAVVNKNLR 401
+ WMAPE+I+ + Y + DVY+FG++L+E++ G +PY +N Q F V L
Sbjct: 196 SILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLS 255
Query: 402 P---AIPGDCPPAMAALIEQCWSLQPDKRPEFWHIVKVLEQFETSL 444
P + +CP AM L+ +C + D+RP F I+ +E SL
Sbjct: 256 PDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASIELLARSL 301
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 146 bits (368), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 89/286 (31%), Positives = 151/286 (52%), Gaps = 19/286 (6%)
Query: 169 DAADEHTVDLSQLFLGLRFAHGAHSRLYHGIYKDEPVAVKIIRIPDDDENETLAARLEKQ 228
D++D+ + Q+ +G R G+ +Y G + + VAVK++ + + A
Sbjct: 26 DSSDDWEIPDGQITVGQRIGSGSFGTVYKGKWHGD-VAVKMLNVTAPTPQQLQA------ 78
Query: 229 FNREVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIA 288
F EV +L + + N++ F+ KP + ++T++ SL +LH +E K + KLI
Sbjct: 79 FKNEVGVLRKTRHVNILLFMGYSTKPQL-AIVTQWCEGSSLYHHLHIIETK-FEMIKLID 136
Query: 289 IALDIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIACEEVYCDA---LSDDPG 345
IA A+GM+Y+H++ +IHRDLK N+ + ++ +KI DFG+A + G
Sbjct: 137 IARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSG 196
Query: 346 TYRWMAPEMIKHKS---YGRKVDVYSFGLILWEMVAGTIPYEEMNP-IQAAFAVVNKNLR 401
+ WMAPE+I+ + Y + DVY+FG++L+E++ G +PY +N Q F V L
Sbjct: 197 SILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLS 256
Query: 402 P---AIPGDCPPAMAALIEQCWSLQPDKRPEFWHIVKVLEQFETSL 444
P + +CP AM L+ +C + D+RP F I+ +E SL
Sbjct: 257 PDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASIELLARSL 302
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 146 bits (368), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 87/282 (30%), Positives = 149/282 (52%), Gaps = 19/282 (6%)
Query: 169 DAADEHTVDLSQLFLGLRFAHGAHSRLYHGIYKDEPVAVKIIRIPDDDENETLAARLEKQ 228
DAAD+ + Q+ +G R G+ +Y G + + VAVK++ + + A
Sbjct: 14 DAADDWEIPDGQITVGQRIGSGSFGTVYKGKWHGD-VAVKMLNVTAPTPQQLQA------ 66
Query: 229 FNREVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIA 288
F EV +L + + N++ F+ P + ++T++ SL +LH E K + KLI
Sbjct: 67 FKNEVGVLRKTRHVNILLFMGYSTAPQL-AIVTQWCEGSSLYHHLHASETK-FEMKKLID 124
Query: 289 IALDIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIACEEVYCDA---LSDDPG 345
IA ARGM+Y+H++ +IHRDLK N+ + ++ +KI DFG+A E+ G
Sbjct: 125 IARQTARGMDYLHAKSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSG 184
Query: 346 TYRWMAPEMIKHKS---YGRKVDVYSFGLILWEMVAGTIPYEEMNPIQAAFAVVNK-NLR 401
+ WMAPE+I+ + Y + DVY+FG++L+E++ G +PY +N +V + +L
Sbjct: 185 SILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSLS 244
Query: 402 P---AIPGDCPPAMAALIEQCWSLQPDKRPEFWHIVKVLEQF 440
P + +CP M L+ +C + D+RP F I+ +E+
Sbjct: 245 PDLSKVRSNCPKRMKRLMAECLKKKRDERPSFPRILAEIEEL 286
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 145 bits (366), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 89/286 (31%), Positives = 151/286 (52%), Gaps = 19/286 (6%)
Query: 169 DAADEHTVDLSQLFLGLRFAHGAHSRLYHGIYKDEPVAVKIIRIPDDDENETLAARLEKQ 228
D++D+ + Q+ +G R G+ +Y G + + VAVK++ + + A
Sbjct: 3 DSSDDWEIPDGQITVGQRIGSGSFGTVYKGKWHGD-VAVKMLNVTAPTPQQLQA------ 55
Query: 229 FNREVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIA 288
F EV +L + + N++ F+ KP + ++T++ SL +LH +E K + KLI
Sbjct: 56 FKNEVGVLRKTRHVNILLFMGYSTKPQL-AIVTQWCEGSSLYHHLHIIETK-FEMIKLID 113
Query: 289 IALDIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIACEEVYCDA---LSDDPG 345
IA A+GM+Y+H++ +IHRDLK N+ + ++ +KI DFG+A + G
Sbjct: 114 IARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSG 173
Query: 346 TYRWMAPEMIKHKS---YGRKVDVYSFGLILWEMVAGTIPYEEMNP-IQAAFAVVNKNLR 401
+ WMAPE+I+ + Y + DVY+FG++L+E++ G +PY +N Q F V L
Sbjct: 174 SILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLS 233
Query: 402 P---AIPGDCPPAMAALIEQCWSLQPDKRPEFWHIVKVLEQFETSL 444
P + +CP AM L+ +C + D+RP F I+ +E SL
Sbjct: 234 PDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASIELLARSL 279
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 145 bits (366), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 89/286 (31%), Positives = 151/286 (52%), Gaps = 19/286 (6%)
Query: 169 DAADEHTVDLSQLFLGLRFAHGAHSRLYHGIYKDEPVAVKIIRIPDDDENETLAARLEKQ 228
D++D+ + Q+ +G R G+ +Y G + + VAVK++ + + A
Sbjct: 3 DSSDDWEIPDGQITVGQRIGSGSFGTVYKGKWHGD-VAVKMLNVTAPTPQQLQA------ 55
Query: 229 FNREVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIA 288
F EV +L + + N++ F+ KP + ++T++ SL +LH +E K + KLI
Sbjct: 56 FKNEVGVLRKTRHVNILLFMGYSTKPQL-AIVTQWCEGSSLYHHLHIIETK-FEMIKLID 113
Query: 289 IALDIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIACEEVYCDA---LSDDPG 345
IA A+GM+Y+H++ +IHRDLK N+ + ++ +KI DFG+A + G
Sbjct: 114 IARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSG 173
Query: 346 TYRWMAPEMIKHKS---YGRKVDVYSFGLILWEMVAGTIPYEEMNP-IQAAFAVVNKNLR 401
+ WMAPE+I+ + Y + DVY+FG++L+E++ G +PY +N Q F V L
Sbjct: 174 SILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLS 233
Query: 402 P---AIPGDCPPAMAALIEQCWSLQPDKRPEFWHIVKVLEQFETSL 444
P + +CP AM L+ +C + D+RP F I+ +E SL
Sbjct: 234 PDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASIELLARSL 279
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 145 bits (365), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 91/269 (33%), Positives = 146/269 (54%), Gaps = 21/269 (7%)
Query: 186 RFAHGAHSRLYHG-IYKDEPVAVKIIRIPDDDENETLAARLEKQFNREVALLSRLHNPNV 244
+ G ++ G + KD+ V I D E ET ++F REV ++S L++PN+
Sbjct: 26 QIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNI 85
Query: 245 IKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAI--ALDIARGMEYIHS 302
+K PP ++ E++ G L H+L K P+ + + LDIA G+EY+ +
Sbjct: 86 VKLYGLMHNPPR--MVMEFVPCGDL---YHRLLDKAHPIKWSVKLRLMLDIALGIEYMQN 140
Query: 303 QG--VIHRDLKPENVLI-----DQEFHLKIADFGIACEEVYCDALSDDPGTYRWMAPEMI 355
Q ++HRDL+ N+ + + K+ADFG++ + V+ ++S G ++WMAPE I
Sbjct: 141 QNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQQSVH--SVSGLLGNFQWMAPETI 198
Query: 356 --KHKSYGRKVDVYSFGLILWEMVAGTIPYEEMNPIQAAF--AVVNKNLRPAIPGDCPPA 411
+ +SY K D YSF +IL+ ++ G P++E + + F + + LRP IP DCPP
Sbjct: 199 GAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIREEGLRPTIPEDCPPR 258
Query: 412 MAALIEQCWSLQPDKRPEFWHIVKVLEQF 440
+ +IE CWS P KRP F +IVK L +
Sbjct: 259 LRNVIELCWSGDPKKRPHFSYIVKELSEL 287
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 144 bits (364), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 89/283 (31%), Positives = 149/283 (52%), Gaps = 19/283 (6%)
Query: 172 DEHTVDLSQLFLGLRFAHGAHSRLYHGIYKDEPVAVKIIRIPDDDENETLAARLEKQFNR 231
D+ + Q+ +G R G+ +Y G + + VAVK++ + + A F
Sbjct: 1 DDWEIPDGQITVGQRIGSGSFGTVYKGKWHGD-VAVKMLNVTAPTPQQLQA------FKN 53
Query: 232 EVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIAL 291
EV +L + + N++ F+ KP + ++T++ SL +LH +E K + KLI IA
Sbjct: 54 EVGVLRKTRHVNILLFMGYSTKPQL-AIVTQWCEGSSLYHHLHIIETK-FEMIKLIDIAR 111
Query: 292 DIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIACEEVYCDA---LSDDPGTYR 348
A+GM+Y+H++ +IHRDLK N+ + ++ +KI DFG+A E+ G+
Sbjct: 112 QTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSIL 171
Query: 349 WMAPEMIKHKS---YGRKVDVYSFGLILWEMVAGTIPYEEMNP-IQAAFAVVNKNLRP-- 402
WMAPE+I+ + Y + DVY+FG++L+E++ G +PY +N Q F V L P
Sbjct: 172 WMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDL 231
Query: 403 -AIPGDCPPAMAALIEQCWSLQPDKRPEFWHIVKVLEQFETSL 444
+ +CP AM L+ +C + D+RP F I+ +E SL
Sbjct: 232 SKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASIELLARSL 274
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 144 bits (363), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 91/269 (33%), Positives = 145/269 (53%), Gaps = 21/269 (7%)
Query: 186 RFAHGAHSRLYHG-IYKDEPVAVKIIRIPDDDENETLAARLEKQFNREVALLSRLHNPNV 244
+ G ++ G + KD+ V I D E ET ++F REV ++S L++PN+
Sbjct: 26 QIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNI 85
Query: 245 IKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAI--ALDIARGMEYIHS 302
+K PP ++ E++ G L H+L K P+ + + LDIA G+EY+ +
Sbjct: 86 VKLYGLMHNPPR--MVMEFVPCGDL---YHRLLDKAHPIKWSVKLRLMLDIALGIEYMQN 140
Query: 303 QG--VIHRDLKPENVLI-----DQEFHLKIADFGIACEEVYCDALSDDPGTYRWMAPEMI 355
Q ++HRDL+ N+ + + K+ADFG + + V+ ++S G ++WMAPE I
Sbjct: 141 QNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGTSQQSVH--SVSGLLGNFQWMAPETI 198
Query: 356 --KHKSYGRKVDVYSFGLILWEMVAGTIPYEEMNPIQAAF--AVVNKNLRPAIPGDCPPA 411
+ +SY K D YSF +IL+ ++ G P++E + + F + + LRP IP DCPP
Sbjct: 199 GAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIREEGLRPTIPEDCPPR 258
Query: 412 MAALIEQCWSLQPDKRPEFWHIVKVLEQF 440
+ +IE CWS P KRP F +IVK L +
Sbjct: 259 LRNVIELCWSGDPKKRPHFSYIVKELSEL 287
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 144 bits (363), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 86/287 (29%), Positives = 151/287 (52%), Gaps = 19/287 (6%)
Query: 169 DAADEHTVDLSQLFLGLRFAHGAHSRLYHGIYKDEPVAVKIIRIPDDDENETLAARLEKQ 228
D++D+ + Q+ +G R G+ +Y G + + VAVK++ + + A
Sbjct: 2 DSSDDWEIPDGQITVGQRIGSGSFGTVYKGKWHGD-VAVKMLNVTAPTPQQLQA------ 54
Query: 229 FNREVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIA 288
F EV +L + + N++ F+ KP + ++T++ SL +LH E K + KLI
Sbjct: 55 FKNEVGVLRKTRHVNILLFMGYSTKPQL-AIVTQWCEGSSLYHHLHASETK-FEMKKLID 112
Query: 289 IALDIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIACEEVYCDA---LSDDPG 345
IA ARGM+Y+H++ +IHRDLK N+ + ++ +KI DFG+A + G
Sbjct: 113 IARQTARGMDYLHAKSIIHRDLKSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQFEQLSG 172
Query: 346 TYRWMAPEMIKHKS---YGRKVDVYSFGLILWEMVAGTIPYEEMNPIQAAFAVVNK-NLR 401
+ WMAPE+I+ + Y + DVY+FG++L+E++ G +PY +N +V + +L
Sbjct: 173 SILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSLS 232
Query: 402 P---AIPGDCPPAMAALIEQCWSLQPDKRPEFWHIVKVLEQFETSLA 445
P + +CP M L+ +C + D+RP F I+ +E+ L+
Sbjct: 233 PDLSKVRSNCPKRMKRLMAECLKKKRDERPSFPRILAEIEELARELS 279
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 143 bits (360), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 88/285 (30%), Positives = 150/285 (52%), Gaps = 19/285 (6%)
Query: 170 AADEHTVDLSQLFLGLRFAHGAHSRLYHGIYKDEPVAVKIIRIPDDDENETLAARLEKQF 229
++D+ + Q+ +G R G+ +Y G + + VAVK++ + + A F
Sbjct: 1 SSDDWEIPDGQITVGQRIGSGSFGTVYKGKWHGD-VAVKMLNVTAPTPQQLQA------F 53
Query: 230 NREVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAI 289
EV +L + + N++ F+ KP + ++T++ SL +LH +E K + KLI I
Sbjct: 54 KNEVGVLRKTRHVNILLFMGYSTKPQL-AIVTQWCEGSSLYHHLHIIETK-FEMIKLIDI 111
Query: 290 ALDIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIACEEVYCDA---LSDDPGT 346
A A+GM+Y+H++ +IHRDLK N+ + ++ +KI DFG+A + G+
Sbjct: 112 ARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGS 171
Query: 347 YRWMAPEMIKHKS---YGRKVDVYSFGLILWEMVAGTIPYEEMNP-IQAAFAVVNKNLRP 402
WMAPE+I+ + Y + DVY+FG++L+E++ G +PY +N Q F V L P
Sbjct: 172 ILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSP 231
Query: 403 ---AIPGDCPPAMAALIEQCWSLQPDKRPEFWHIVKVLEQFETSL 444
+ +CP AM L+ +C + D+RP F I+ +E SL
Sbjct: 232 DLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASIELLARSL 276
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 142 bits (359), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 90/269 (33%), Positives = 145/269 (53%), Gaps = 21/269 (7%)
Query: 186 RFAHGAHSRLYHG-IYKDEPVAVKIIRIPDDDENETLAARLEKQFNREVALLSRLHNPNV 244
+ G ++ G + KD+ V I D E ET ++F REV ++S L++PN+
Sbjct: 26 QIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNI 85
Query: 245 IKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAI--ALDIARGMEYIHS 302
+K PP ++ E++ G L H+L K P+ + + LDIA G+EY+ +
Sbjct: 86 VKLYGLMHNPPR--MVMEFVPCGDL---YHRLLDKAHPIKWSVKLRLMLDIALGIEYMQN 140
Query: 303 QG--VIHRDLKPENVLI-----DQEFHLKIADFGIACEEVYCDALSDDPGTYRWMAPEMI 355
Q ++HRDL+ N+ + + K+ADF ++ + V+ ++S G ++WMAPE I
Sbjct: 141 QNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFSLSQQSVH--SVSGLLGNFQWMAPETI 198
Query: 356 --KHKSYGRKVDVYSFGLILWEMVAGTIPYEEMNPIQAAF--AVVNKNLRPAIPGDCPPA 411
+ +SY K D YSF +IL+ ++ G P++E + + F + + LRP IP DCPP
Sbjct: 199 GAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIREEGLRPTIPEDCPPR 258
Query: 412 MAALIEQCWSLQPDKRPEFWHIVKVLEQF 440
+ +IE CWS P KRP F +IVK L +
Sbjct: 259 LRNVIELCWSGDPKKRPHFSYIVKELSEL 287
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 141 bits (356), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 88/283 (31%), Positives = 148/283 (52%), Gaps = 19/283 (6%)
Query: 172 DEHTVDLSQLFLGLRFAHGAHSRLYHGIYKDEPVAVKIIRIPDDDENETLAARLEKQFNR 231
D+ + Q+ +G R G+ +Y G + + VAVK++ + + A F
Sbjct: 1 DDWEIPDGQITVGQRIGSGSFGTVYKGKWHGD-VAVKMLNVTAPTPQQLQA------FKN 53
Query: 232 EVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIAL 291
EV +L + + N++ F+ KP + ++T++ SL +LH +E K + KLI IA
Sbjct: 54 EVGVLRKTRHVNILLFMGYSTKPQL-AIVTQWCEGSSLYHHLHIIETK-FEMIKLIDIAR 111
Query: 292 DIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIACEEVYCDA---LSDDPGTYR 348
A+GM+Y+H++ +IHRDLK N+ + ++ +KI DFG+A + G+
Sbjct: 112 QTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSIL 171
Query: 349 WMAPEMIKHKS---YGRKVDVYSFGLILWEMVAGTIPYEEMNP-IQAAFAVVNKNLRP-- 402
WMAPE+I+ + Y + DVY+FG++L+E++ G +PY +N Q F V L P
Sbjct: 172 WMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDL 231
Query: 403 -AIPGDCPPAMAALIEQCWSLQPDKRPEFWHIVKVLEQFETSL 444
+ +CP AM L+ +C + D+RP F I+ +E SL
Sbjct: 232 SKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASIELLARSL 274
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 140 bits (354), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 73/271 (26%), Positives = 141/271 (52%), Gaps = 13/271 (4%)
Query: 172 DEHTVDLSQLFLGLRFAHGAHSRLYHGIYKDEPVAVKIIRIPDDDENETLAARLEKQFNR 231
D+ ++ + + + + G + +Y G++K + V + + +D T+ ++F +
Sbjct: 4 DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED----TMEV---EEFLK 56
Query: 232 EVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIAL 291
E A++ + +PN+++ + C + P + +ITE+++ G+L YL + + + L+ +A
Sbjct: 57 EAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMAT 116
Query: 292 DIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIACEEVYCDALSDDPGT---YR 348
I+ MEY+ + IHRDL N L+ + +K+ADFG++ + D + G +
Sbjct: 117 QISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLS-RLMTGDTFTAHAGAKFPIK 175
Query: 349 WMAPEMIKHKSYGRKVDVYSFGLILWEMVA-GTIPYEEMNPIQAAFAVVNKNLRPAIPGD 407
W APE + + + K DV++FG++LWE+ G PY ++P Q + ++ K+ R P
Sbjct: 176 WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDPSQ-VYELLEKDYRMERPEG 234
Query: 408 CPPAMAALIEQCWSLQPDKRPEFWHIVKVLE 438
CP + L+ CW P RP F I + E
Sbjct: 235 CPEKVYELMRACWQWNPSDRPSFAEIHQAFE 265
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 140 bits (354), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 92/286 (32%), Positives = 147/286 (51%), Gaps = 21/286 (7%)
Query: 162 GVRVNAVDAADEHTVDLSQLFLGLRFAHGAHSRLYHGIYK--DEPVAVKIIRIPDDDENE 219
GV ++ D+ ++ L LG + G ++ G + + VAVK R E
Sbjct: 97 GVVLHRAVPKDKWVLNHEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCR-------E 149
Query: 220 TLAARLEKQFNREVALLSRLHNPNVIKFVAAC-KKPPVYCVITEYLSEGSLRAYLHKLEH 278
TL L+ +F +E +L + +PN+++ + C +K P+Y ++ E + G +L + E
Sbjct: 150 TLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIY-IVMELVQGGDFLTFL-RTEG 207
Query: 279 KTLPLPKLIAIALDIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIACEEVYCD 338
L + L+ + D A GMEY+ S+ IHRDL N L+ ++ LKI+DFG++ EE D
Sbjct: 208 ARLRVKTLLQMVGDAAAGMEYLESKCCIHRDLAARNCLVTEKNVLKISDFGMSREEA--D 265
Query: 339 ALSDDPGTYR-----WMAPEMIKHKSYGRKVDVYSFGLILWEMVA-GTIPYEEMNPIQAA 392
+ G R W APE + + Y + DV+SFG++LWE + G PY ++ Q
Sbjct: 266 GVXAASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSN-QQT 324
Query: 393 FAVVNKNLRPAIPGDCPPAMAALIEQCWSLQPDKRPEFWHIVKVLE 438
V K R P CP A+ L+EQCW+ +P +RP F I + L+
Sbjct: 325 REFVEKGGRLPCPELCPDAVFRLMEQCWAYEPGQRPSFSTIYQELQ 370
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 140 bits (352), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 91/284 (32%), Positives = 147/284 (51%), Gaps = 17/284 (5%)
Query: 162 GVRVNAVDAADEHTVDLSQLFLGLRFAHGAHSRLYHGIYKDEP--VAVKIIRIPDDDENE 219
GV ++ D+ ++ L LG + G ++ G + + VAVK R E
Sbjct: 97 GVVLHRAVPKDKWVLNHEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCR-------E 149
Query: 220 TLAARLEKQFNREVALLSRLHNPNVIKFVAAC-KKPPVYCVITEYLSEGSLRAYLHKLEH 278
TL L+ +F +E +L + +PN+++ + C +K P+Y ++ E + G +L + E
Sbjct: 150 TLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIY-IVMELVQGGDFLTFL-RTEG 207
Query: 279 KTLPLPKLIAIALDIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIACEE---V 335
L + L+ + D A GMEY+ S+ IHRDL N L+ ++ LKI+DFG++ EE V
Sbjct: 208 ARLRVKTLLQMVGDAAAGMEYLESKCCIHRDLAARNCLVTEKNVLKISDFGMSREEADGV 267
Query: 336 YCDALSDDPGTYRWMAPEMIKHKSYGRKVDVYSFGLILWEMVA-GTIPYEEMNPIQAAFA 394
Y + +W APE + + Y + DV+SFG++LWE + G PY ++ Q
Sbjct: 268 YAASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSN-QQTRE 326
Query: 395 VVNKNLRPAIPGDCPPAMAALIEQCWSLQPDKRPEFWHIVKVLE 438
V K R P CP A+ L+EQCW+ +P +RP F I + L+
Sbjct: 327 FVEKGGRLPCPELCPDAVFRLMEQCWAYEPGQRPSFSTIYQELQ 370
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 139 bits (351), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 87/283 (30%), Positives = 147/283 (51%), Gaps = 19/283 (6%)
Query: 172 DEHTVDLSQLFLGLRFAHGAHSRLYHGIYKDEPVAVKIIRIPDDDENETLAARLEKQFNR 231
D+ + Q+ +G R G+ +Y G + + VAVK++ + + A F
Sbjct: 1 DDWEIPDGQITVGQRIGSGSFGTVYKGKWHGD-VAVKMLNVTAPTPQQLQA------FKN 53
Query: 232 EVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIAL 291
EV +L + + N++ F+ P + ++T++ SL +LH +E K + KLI IA
Sbjct: 54 EVGVLRKTRHVNILLFMGYSTAPQL-AIVTQWCEGSSLYHHLHIIETK-FEMIKLIDIAR 111
Query: 292 DIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIACEEVYCDA---LSDDPGTYR 348
A+GM+Y+H++ +IHRDLK N+ + ++ +KI DFG+A + G+
Sbjct: 112 QTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSIL 171
Query: 349 WMAPEMIKHKS---YGRKVDVYSFGLILWEMVAGTIPYEEMNP-IQAAFAVVNKNLRP-- 402
WMAPE+I+ + Y + DVY+FG++L+E++ G +PY +N Q F V L P
Sbjct: 172 WMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDL 231
Query: 403 -AIPGDCPPAMAALIEQCWSLQPDKRPEFWHIVKVLEQFETSL 444
+ +CP AM L+ +C + D+RP F I+ +E SL
Sbjct: 232 SKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASIELLARSL 274
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 139 bits (350), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 90/274 (32%), Positives = 144/274 (52%), Gaps = 28/274 (10%)
Query: 174 HTVDLSQLFLGLRFAHGAHSRLYHGIYKDEPVAVKIIRIPDDDENETLAARLEKQFNREV 233
H +D ++ + GA + ++ + VA+K I + E+E K F E+
Sbjct: 4 HMIDYKEIEVEEVVGRGAFGVVCKAKWRAKDVAIKQI----ESESE------RKAFIVEL 53
Query: 234 ALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAI---- 289
LSR+++PN++K AC P C++ EY GSL LH E PLP A
Sbjct: 54 RQLSRVNHPNIVKLYGACLNP--VCLVMEYAEGGSLYNVLHGAE----PLPYYTAAHAMS 107
Query: 290 -ALDIARGMEYIHS---QGVIHRDLKPENVL-IDQEFHLKIADFGIACEEVYCDALSDDP 344
L ++G+ Y+HS + +IHRDLKP N+L + LKI DFG AC+ ++++
Sbjct: 108 WCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACD--IQTHMTNNK 165
Query: 345 GTYRWMAPEMIKHKSYGRKVDVYSFGLILWEMVAGTIPYEEM-NPIQAAFAVVNKNLRPA 403
G+ WMAPE+ + +Y K DV+S+G+ILWE++ P++E+ P V+ RP
Sbjct: 166 GSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMWAVHNGTRPP 225
Query: 404 IPGDCPPAMAALIEQCWSLQPDKRPEFWHIVKVL 437
+ + P + +L+ +CWS P +RP IVK++
Sbjct: 226 LIKNLPKPIESLMTRCWSKDPSQRPSMEEIVKIM 259
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 139 bits (349), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 90/274 (32%), Positives = 144/274 (52%), Gaps = 28/274 (10%)
Query: 174 HTVDLSQLFLGLRFAHGAHSRLYHGIYKDEPVAVKIIRIPDDDENETLAARLEKQFNREV 233
H +D ++ + GA + ++ + VA+K I + E+E K F E+
Sbjct: 3 HMIDYKEIEVEEVVGRGAFGVVCKAKWRAKDVAIKQI----ESESE------RKAFIVEL 52
Query: 234 ALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAI---- 289
LSR+++PN++K AC P C++ EY GSL LH E PLP A
Sbjct: 53 RQLSRVNHPNIVKLYGACLNP--VCLVMEYAEGGSLYNVLHGAE----PLPYYTAAHAMS 106
Query: 290 -ALDIARGMEYIHS---QGVIHRDLKPENVL-IDQEFHLKIADFGIACEEVYCDALSDDP 344
L ++G+ Y+HS + +IHRDLKP N+L + LKI DFG AC+ ++++
Sbjct: 107 WCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACD--IQTHMTNNK 164
Query: 345 GTYRWMAPEMIKHKSYGRKVDVYSFGLILWEMVAGTIPYEEM-NPIQAAFAVVNKNLRPA 403
G+ WMAPE+ + +Y K DV+S+G+ILWE++ P++E+ P V+ RP
Sbjct: 165 GSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMWAVHNGTRPP 224
Query: 404 IPGDCPPAMAALIEQCWSLQPDKRPEFWHIVKVL 437
+ + P + +L+ +CWS P +RP IVK++
Sbjct: 225 LIKNLPKPIESLMTRCWSKDPSQRPSMEEIVKIM 258
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 139 bits (349), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 73/271 (26%), Positives = 140/271 (51%), Gaps = 13/271 (4%)
Query: 172 DEHTVDLSQLFLGLRFAHGAHSRLYHGIYKDEPVAVKIIRIPDDDENETLAARLEKQFNR 231
D+ ++ + + + + G +Y G++K + V + + +D T+ ++F +
Sbjct: 4 DKWEMERTDITMKHKLGGGQFGEVYEGVWKKYSLTVAVKTLKED----TMEV---EEFLK 56
Query: 232 EVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIAL 291
E A++ + +PN+++ + C + P + +ITE+++ G+L YL + + + L+ +A
Sbjct: 57 EAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMAT 116
Query: 292 DIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIACEEVYCDALSDDPGT---YR 348
I+ MEY+ + IHRDL N L+ + +K+ADFG++ + D + G +
Sbjct: 117 QISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLS-RLMTGDTXTAHAGAKFPIK 175
Query: 349 WMAPEMIKHKSYGRKVDVYSFGLILWEMVA-GTIPYEEMNPIQAAFAVVNKNLRPAIPGD 407
W APE + + + K DV++FG++LWE+ G PY ++P Q + ++ K+ R P
Sbjct: 176 WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDPSQ-VYELLEKDYRMERPEG 234
Query: 408 CPPAMAALIEQCWSLQPDKRPEFWHIVKVLE 438
CP + L+ CW P RP F I + E
Sbjct: 235 CPEKVYELMRACWQWNPSDRPSFAEIHQAFE 265
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 138 bits (348), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 75/283 (26%), Positives = 146/283 (51%), Gaps = 15/283 (5%)
Query: 172 DEHTVDLSQLFLGLRFAHGAHSRLYHGIYKDEPVAVKIIRIPDDDENETLAARLEKQFNR 231
D+ ++ + + + + G + +Y G++K + V + + +D T+ ++F +
Sbjct: 4 DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED----TMEV---EEFLK 56
Query: 232 EVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIAL 291
E A++ + +PN+++ + C + P + +I E+++ G+L YL + + + L+ +A
Sbjct: 57 EAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMAT 116
Query: 292 DIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIACEEVYCDALSDDPGT---YR 348
I+ MEY+ + IHRDL N L+ + +K+ADFG++ + D + G +
Sbjct: 117 QISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLS-RLMTGDTXTAHAGAKFPIK 175
Query: 349 WMAPEMIKHKSYGRKVDVYSFGLILWEMVA-GTIPYEEMNPIQAAFAVVNKNLRPAIPGD 407
W APE + + + K DV++FG++LWE+ G PY ++P Q + ++ K+ R P
Sbjct: 176 WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDPSQ-VYELLEKDYRMERPEG 234
Query: 408 CPPAMAALIEQCWSLQPDKRPEFWHIVKVLEQF--ETSLACNG 448
CP + L+ CW P RP F I + E E+S++ G
Sbjct: 235 CPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESSISDEG 277
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 137 bits (345), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 79/280 (28%), Positives = 137/280 (48%), Gaps = 26/280 (9%)
Query: 172 DEHTVDLSQLFLGLRFAHGAHSRLYHGIYKDEPVAVKIIRIPDDDENETLAARLEKQFNR 231
D + + ++ F RL K+ VA+K +++ + + F
Sbjct: 43 DATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKV-------GYTEKQRRDFLG 95
Query: 232 EVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIAL 291
E +++ + +PN+I+ K ++TEY+ GSL ++L K + + + +L+ +
Sbjct: 96 EASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQ-FTVIQLVGMLR 154
Query: 292 DIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIACEEVYCDALSDDPGT----- 346
IA GM+Y+ G +HRDL N+LI+ K++DFG+A L DDP
Sbjct: 155 GIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLA------RVLEDDPEAAYTTR 208
Query: 347 -----YRWMAPEMIKHKSYGRKVDVYSFGLILWEMVA-GTIPYEEMNPIQAAFAVVNKNL 400
RW +PE I ++ + DV+S+G++LWE+++ G PY EM+ Q V++
Sbjct: 209 GGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSN-QDVIKAVDEGY 267
Query: 401 RPAIPGDCPPAMAALIEQCWSLQPDKRPEFWHIVKVLEQF 440
R P DCP A+ L+ CW + RP+F IV +L++
Sbjct: 268 RLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKL 307
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 137 bits (344), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 80/219 (36%), Positives = 119/219 (54%), Gaps = 7/219 (3%)
Query: 229 FNREVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIA 288
F E ++ L + ++K A K P+Y +ITE++++GSL +L E PLPKLI
Sbjct: 230 FLAEANVMKTLQHDKLVKLHAVVTKEPIY-IITEFMAKGSLLDFLKSDEGSKQPLPKLID 288
Query: 289 IALDIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIA--CEEVYCDALSDDPGT 346
+ IA GM +I + IHRDL+ N+L+ KIADFG+A E+ A
Sbjct: 289 FSAQIAEGMAFIEQRNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFP 348
Query: 347 YRWMAPEMIKHKSYGRKVDVYSFGLILWEMVA-GTIPYEEM-NPIQAAFAVVNKNLRPAI 404
+W APE I S+ K DV+SFG++L E+V G IPY M NP + + R
Sbjct: 349 IKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNP--EVIRALERGYRMPR 406
Query: 405 PGDCPPAMAALIEQCWSLQPDKRPEFWHIVKVLEQFETS 443
P +CP + ++ +CW +P++RP F +I VL+ F T+
Sbjct: 407 PENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDDFYTA 445
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 136 bits (343), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 78/280 (27%), Positives = 137/280 (48%), Gaps = 26/280 (9%)
Query: 172 DEHTVDLSQLFLGLRFAHGAHSRLYHGIYKDEPVAVKIIRIPDDDENETLAARLEKQFNR 231
D + + ++ F RL K+ VA+K +++ + + F
Sbjct: 31 DATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKV-------GYTEKQRRDFLG 83
Query: 232 EVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIAL 291
E +++ + +PN+I+ K ++TEY+ GSL ++L K + + + +L+ +
Sbjct: 84 EASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQ-FTVIQLVGMLR 142
Query: 292 DIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIACEEVYCDALSDDPGT----- 346
IA GM+Y+ G +HRDL N+LI+ K++DFG++ L DDP
Sbjct: 143 GIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLS------RVLEDDPEAAYTTR 196
Query: 347 -----YRWMAPEMIKHKSYGRKVDVYSFGLILWEMVA-GTIPYEEMNPIQAAFAVVNKNL 400
RW +PE I ++ + DV+S+G++LWE+++ G PY EM+ Q V++
Sbjct: 197 GGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSN-QDVIKAVDEGY 255
Query: 401 RPAIPGDCPPAMAALIEQCWSLQPDKRPEFWHIVKVLEQF 440
R P DCP A+ L+ CW + RP+F IV +L++
Sbjct: 256 RLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKL 295
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 136 bits (343), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 71/271 (26%), Positives = 140/271 (51%), Gaps = 13/271 (4%)
Query: 172 DEHTVDLSQLFLGLRFAHGAHSRLYHGIYKDEPVAVKIIRIPDDDENETLAARLEKQFNR 231
D+ ++ + + + + G + +Y G++K + V + + +D T+ ++F +
Sbjct: 6 DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED----TMEV---EEFLK 58
Query: 232 EVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIAL 291
E A++ + +PN+++ + C + P + +ITE+++ G+L YL + + + L+ +A
Sbjct: 59 EAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMAT 118
Query: 292 DIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIACEEVYCDALSDDPGT---YR 348
I+ MEY+ + IHRDL N L+ + +K+ADFG++ + D + G +
Sbjct: 119 QISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLS-RLMTGDTYTAHAGAKFPIK 177
Query: 349 WMAPEMIKHKSYGRKVDVYSFGLILWEMVA-GTIPYEEMNPIQAAFAVVNKNLRPAIPGD 407
W APE + + + K DV++FG++LWE+ G PY ++ + + ++ K+ R P
Sbjct: 178 WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGID-LSQVYELLEKDYRMERPEG 236
Query: 408 CPPAMAALIEQCWSLQPDKRPEFWHIVKVLE 438
CP + L+ CW P RP F I + E
Sbjct: 237 CPEKVYELMRACWQWNPSDRPSFAEIHQAFE 267
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 136 bits (343), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 78/280 (27%), Positives = 137/280 (48%), Gaps = 26/280 (9%)
Query: 172 DEHTVDLSQLFLGLRFAHGAHSRLYHGIYKDEPVAVKIIRIPDDDENETLAARLEKQFNR 231
D + + ++ F RL K+ VA+K +++ + + F
Sbjct: 14 DATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVG-------YTEKQRRDFLG 66
Query: 232 EVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIAL 291
E +++ + +PN+I+ K ++TEY+ GSL ++L K + + + +L+ +
Sbjct: 67 EASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQ-FTVIQLVGMLR 125
Query: 292 DIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIACEEVYCDALSDDPGT----- 346
IA GM+Y+ G +HRDL N+LI+ K++DFG++ L DDP
Sbjct: 126 GIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLS------RVLEDDPEAAYTTR 179
Query: 347 -----YRWMAPEMIKHKSYGRKVDVYSFGLILWEMVA-GTIPYEEMNPIQAAFAVVNKNL 400
RW +PE I ++ + DV+S+G++LWE+++ G PY EM+ Q V++
Sbjct: 180 GGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSN-QDVIKAVDEGY 238
Query: 401 RPAIPGDCPPAMAALIEQCWSLQPDKRPEFWHIVKVLEQF 440
R P DCP A+ L+ CW + RP+F IV +L++
Sbjct: 239 RLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKL 278
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 136 bits (343), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 78/280 (27%), Positives = 137/280 (48%), Gaps = 26/280 (9%)
Query: 172 DEHTVDLSQLFLGLRFAHGAHSRLYHGIYKDEPVAVKIIRIPDDDENETLAARLEKQFNR 231
D + + ++ F RL K+ VA+K +++ + + F
Sbjct: 43 DATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKV-------GYTEKQRRDFLG 95
Query: 232 EVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIAL 291
E +++ + +PN+I+ K ++TEY+ GSL ++L K + + + +L+ +
Sbjct: 96 EASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQ-FTVIQLVGMLR 154
Query: 292 DIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIACEEVYCDALSDDPGT----- 346
IA GM+Y+ G +HRDL N+LI+ K++DFG++ L DDP
Sbjct: 155 GIASGMKYLSDMGFVHRDLAARNILINSNLVCKVSDFGLS------RVLEDDPEAAYTTR 208
Query: 347 -----YRWMAPEMIKHKSYGRKVDVYSFGLILWEMVA-GTIPYEEMNPIQAAFAVVNKNL 400
RW +PE I ++ + DV+S+G++LWE+++ G PY EM+ Q V++
Sbjct: 209 GGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSN-QDVIKAVDEGY 267
Query: 401 RPAIPGDCPPAMAALIEQCWSLQPDKRPEFWHIVKVLEQF 440
R P DCP A+ L+ CW + RP+F IV +L++
Sbjct: 268 RLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKL 307
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 136 bits (342), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 71/271 (26%), Positives = 140/271 (51%), Gaps = 13/271 (4%)
Query: 172 DEHTVDLSQLFLGLRFAHGAHSRLYHGIYKDEPVAVKIIRIPDDDENETLAARLEKQFNR 231
D+ ++ + + + + G + +Y G++K + V + + +D T+ ++F +
Sbjct: 11 DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED----TMEV---EEFLK 63
Query: 232 EVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIAL 291
E A++ + +PN+++ + C + P + +ITE+++ G+L YL + + + L+ +A
Sbjct: 64 EAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMAT 123
Query: 292 DIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIACEEVYCDALSDDPGT---YR 348
I+ MEY+ + IHRDL N L+ + +K+ADFG++ + D + G +
Sbjct: 124 QISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLS-RLMTGDTYTAHAGAKFPIK 182
Query: 349 WMAPEMIKHKSYGRKVDVYSFGLILWEMVA-GTIPYEEMNPIQAAFAVVNKNLRPAIPGD 407
W APE + + + K DV++FG++LWE+ G PY ++ + + ++ K+ R P
Sbjct: 183 WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGID-LSQVYELLEKDYRMERPEG 241
Query: 408 CPPAMAALIEQCWSLQPDKRPEFWHIVKVLE 438
CP + L+ CW P RP F I + E
Sbjct: 242 CPEKVYELMRACWQWNPSDRPSFAEIHQAFE 272
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 136 bits (342), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 78/280 (27%), Positives = 137/280 (48%), Gaps = 26/280 (9%)
Query: 172 DEHTVDLSQLFLGLRFAHGAHSRLYHGIYKDEPVAVKIIRIPDDDENETLAARLEKQFNR 231
D + + ++ F RL K+ VA+K +++ + + F
Sbjct: 43 DATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKV-------GYTEKQRRDFLG 95
Query: 232 EVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIAL 291
E +++ + +PN+I+ K ++TEY+ GSL ++L K + + + +L+ +
Sbjct: 96 EASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQ-FTVIQLVGMLR 154
Query: 292 DIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIACEEVYCDALSDDPGT----- 346
IA GM+Y+ G +HRDL N+LI+ K++DFG++ L DDP
Sbjct: 155 GIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLS------RVLEDDPEAAYTTR 208
Query: 347 -----YRWMAPEMIKHKSYGRKVDVYSFGLILWEMVA-GTIPYEEMNPIQAAFAVVNKNL 400
RW +PE I ++ + DV+S+G++LWE+++ G PY EM+ Q V++
Sbjct: 209 GGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSN-QDVIKAVDEGY 267
Query: 401 RPAIPGDCPPAMAALIEQCWSLQPDKRPEFWHIVKVLEQF 440
R P DCP A+ L+ CW + RP+F IV +L++
Sbjct: 268 RLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKL 307
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 136 bits (342), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 78/280 (27%), Positives = 137/280 (48%), Gaps = 26/280 (9%)
Query: 172 DEHTVDLSQLFLGLRFAHGAHSRLYHGIYKDEPVAVKIIRIPDDDENETLAARLEKQFNR 231
D + + ++ F RL K+ VA+K +++ + + F
Sbjct: 43 DATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKV-------GYTEKQRRDFLG 95
Query: 232 EVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIAL 291
E +++ + +PN+I+ K ++TEY+ GSL ++L K + + + +L+ +
Sbjct: 96 EASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQ-FTVIQLVGMLR 154
Query: 292 DIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIACEEVYCDALSDDPGT----- 346
IA GM+Y+ G +HRDL N+LI+ K++DFG++ L DDP
Sbjct: 155 GIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLS------RVLEDDPEAAYTTR 208
Query: 347 -----YRWMAPEMIKHKSYGRKVDVYSFGLILWEMVA-GTIPYEEMNPIQAAFAVVNKNL 400
RW +PE I ++ + DV+S+G++LWE+++ G PY EM+ Q V++
Sbjct: 209 GGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSN-QDVIKAVDEGY 267
Query: 401 RPAIPGDCPPAMAALIEQCWSLQPDKRPEFWHIVKVLEQF 440
R P DCP A+ L+ CW + RP+F IV +L++
Sbjct: 268 RLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKL 307
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 136 bits (342), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 78/280 (27%), Positives = 137/280 (48%), Gaps = 26/280 (9%)
Query: 172 DEHTVDLSQLFLGLRFAHGAHSRLYHGIYKDEPVAVKIIRIPDDDENETLAARLEKQFNR 231
D + + ++ F RL K+ VA+K +++ + + F
Sbjct: 43 DATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKV-------GYTEKQRRDFLG 95
Query: 232 EVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIAL 291
E +++ + +PN+I+ K ++TEY+ GSL ++L K + + + +L+ +
Sbjct: 96 EASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQ-FTVIQLVGMLR 154
Query: 292 DIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIACEEVYCDALSDDPGT----- 346
IA GM+Y+ G +HRDL N+LI+ K++DFG++ L DDP
Sbjct: 155 GIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLS------RVLEDDPEAAYTTR 208
Query: 347 -----YRWMAPEMIKHKSYGRKVDVYSFGLILWEMVA-GTIPYEEMNPIQAAFAVVNKNL 400
RW +PE I ++ + DV+S+G++LWE+++ G PY EM+ Q V++
Sbjct: 209 GGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSN-QDVIKAVDEGY 267
Query: 401 RPAIPGDCPPAMAALIEQCWSLQPDKRPEFWHIVKVLEQF 440
R P DCP A+ L+ CW + RP+F IV +L++
Sbjct: 268 RLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKL 307
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 136 bits (342), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 78/280 (27%), Positives = 137/280 (48%), Gaps = 26/280 (9%)
Query: 172 DEHTVDLSQLFLGLRFAHGAHSRLYHGIYKDEPVAVKIIRIPDDDENETLAARLEKQFNR 231
D + + ++ F RL K+ VA+K +++ + + F
Sbjct: 43 DATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKV-------GYTEKQRRDFLG 95
Query: 232 EVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIAL 291
E +++ + +PN+I+ K ++TEY+ GSL ++L K + + + +L+ +
Sbjct: 96 EASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQ-FTVIQLVGMLR 154
Query: 292 DIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIACEEVYCDALSDDPGT----- 346
IA GM+Y+ G +HRDL N+LI+ K++DFG++ L DDP
Sbjct: 155 GIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLS------RVLEDDPEAAYTTR 208
Query: 347 -----YRWMAPEMIKHKSYGRKVDVYSFGLILWEMVA-GTIPYEEMNPIQAAFAVVNKNL 400
RW +PE I ++ + DV+S+G++LWE+++ G PY EM+ Q V++
Sbjct: 209 GGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSN-QDVIKAVDEGY 267
Query: 401 RPAIPGDCPPAMAALIEQCWSLQPDKRPEFWHIVKVLEQF 440
R P DCP A+ L+ CW + RP+F IV +L++
Sbjct: 268 RLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKL 307
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 136 bits (342), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 92/275 (33%), Positives = 136/275 (49%), Gaps = 17/275 (6%)
Query: 172 DEHTVDLSQLFLGLRFAHGAHSRLYHGIY-KDEPVAVKIIRIPDDDENETLAARLEKQFN 230
D + L L + G ++ Y K VAVK ++ P E A
Sbjct: 8 DAWEIPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMK-PGSMSVEAFLA------- 59
Query: 231 REVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIA 290
E ++ L + ++K A K P+Y +ITE++++GSL +L E PLPKLI +
Sbjct: 60 -EANVMKTLQHDKLVKLHAVVTKEPIY-IITEFMAKGSLLDFLKSDEGSKQPLPKLIDFS 117
Query: 291 LDIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIA--CEEVYCDALSDDPGTYR 348
IA GM +I + IHRDL+ N+L+ KIADFG+A E+ A +
Sbjct: 118 AQIAEGMAFIEQRNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIK 177
Query: 349 WMAPEMIKHKSYGRKVDVYSFGLILWEMVA-GTIPYEEM-NPIQAAFAVVNKNLRPAIPG 406
W APE I S+ K DV+SFG++L E+V G IPY M NP + + R P
Sbjct: 178 WTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNP--EVIRALERGYRMPRPE 235
Query: 407 DCPPAMAALIEQCWSLQPDKRPEFWHIVKVLEQFE 441
+CP + ++ +CW +P++RP F +I VL+ FE
Sbjct: 236 NCPEELYNIMMRCWKNRPEERPTFEYIQSVLDDFE 270
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 135 bits (341), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 71/271 (26%), Positives = 140/271 (51%), Gaps = 13/271 (4%)
Query: 172 DEHTVDLSQLFLGLRFAHGAHSRLYHGIYKDEPVAVKIIRIPDDDENETLAARLEKQFNR 231
D+ ++ + + + + G + +Y G++K + V + + +D T+ ++F +
Sbjct: 6 DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED----TMEV---EEFLK 58
Query: 232 EVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIAL 291
E A++ + +PN+++ + C + P + +ITE+++ G+L YL + + + L+ +A
Sbjct: 59 EAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMAT 118
Query: 292 DIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIACEEVYCDALSDDPGT---YR 348
I+ MEY+ + IHRDL N L+ + +K+ADFG++ + D + G +
Sbjct: 119 QISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLS-RLMTGDTYTAHAGAKFPIK 177
Query: 349 WMAPEMIKHKSYGRKVDVYSFGLILWEMVA-GTIPYEEMNPIQAAFAVVNKNLRPAIPGD 407
W APE + + + K DV++FG++LWE+ G PY ++ + + ++ K+ R P
Sbjct: 178 WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGID-LSQVYELLEKDYRMERPEG 236
Query: 408 CPPAMAALIEQCWSLQPDKRPEFWHIVKVLE 438
CP + L+ CW P RP F I + E
Sbjct: 237 CPEKVYELMRACWQWNPSDRPSFAEIHQAFE 267
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 135 bits (341), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 78/280 (27%), Positives = 137/280 (48%), Gaps = 26/280 (9%)
Query: 172 DEHTVDLSQLFLGLRFAHGAHSRLYHGIYKDEPVAVKIIRIPDDDENETLAARLEKQFNR 231
D + + ++ F RL K+ VA+K +++ + + F
Sbjct: 41 DATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKV-------GYTEKQRRDFLG 93
Query: 232 EVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIAL 291
E +++ + +PN+I+ K ++TEY+ GSL ++L K + + + +L+ +
Sbjct: 94 EASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQ-FTVIQLVGMLR 152
Query: 292 DIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIACEEVYCDALSDDPGT----- 346
IA GM+Y+ G +HRDL N+LI+ K++DFG++ L DDP
Sbjct: 153 GIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLS------RVLEDDPEAAYTTR 206
Query: 347 -----YRWMAPEMIKHKSYGRKVDVYSFGLILWEMVA-GTIPYEEMNPIQAAFAVVNKNL 400
RW +PE I ++ + DV+S+G++LWE+++ G PY EM+ Q V++
Sbjct: 207 GGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSN-QDVIKAVDEGY 265
Query: 401 RPAIPGDCPPAMAALIEQCWSLQPDKRPEFWHIVKVLEQF 440
R P DCP A+ L+ CW + RP+F IV +L++
Sbjct: 266 RLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKL 305
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 135 bits (341), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 78/280 (27%), Positives = 136/280 (48%), Gaps = 26/280 (9%)
Query: 172 DEHTVDLSQLFLGLRFAHGAHSRLYHGIYKDEPVAVKIIRIPDDDENETLAARLEKQFNR 231
D + + ++ F RL K+ VA+K +++ + + F
Sbjct: 43 DATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKV-------GYTEKQRRDFLG 95
Query: 232 EVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIAL 291
E +++ + +PN+I+ K ++TEY+ GSL ++L K + + + +L+ +
Sbjct: 96 EASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQ-FTVIQLVGMLR 154
Query: 292 DIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIACEEVYCDALSDDPGT----- 346
IA GM+Y+ G +HRDL N+LI+ K++DFG+ L DDP
Sbjct: 155 GIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLG------RVLEDDPEAAYTTR 208
Query: 347 -----YRWMAPEMIKHKSYGRKVDVYSFGLILWEMVA-GTIPYEEMNPIQAAFAVVNKNL 400
RW +PE I ++ + DV+S+G++LWE+++ G PY EM+ Q V++
Sbjct: 209 GGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSN-QDVIKAVDEGY 267
Query: 401 RPAIPGDCPPAMAALIEQCWSLQPDKRPEFWHIVKVLEQF 440
R P DCP A+ L+ CW + RP+F IV +L++
Sbjct: 268 RLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKL 307
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 135 bits (341), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 85/287 (29%), Positives = 146/287 (50%), Gaps = 26/287 (9%)
Query: 166 NAVDAADEH-----TVDLSQLFLGLRFAHGAHSRLYHGIYKDEPVAVKIIRIPDDDENET 220
+V A DE +++ +L L G + G Y+ VAVK I+ N+
Sbjct: 3 GSVAAQDEFYRSGWALNMKELKLLQTIGKGEFGDVMLGDYRGNKVAVKCIK------NDA 56
Query: 221 LAARLEKQFNREVALLSRLHNPNVIKFVAAC--KKPPVYCVITEYLSEGSLRAYLHKLEH 278
A + F E +++++L + N+++ + +K +Y ++TEY+++GSL YL
Sbjct: 57 TA----QAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLY-IVTEYMAKGSLVDYLRSRGR 111
Query: 279 KTLPLPKLIAIALDIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIACEEVYCD 338
L L+ +LD+ MEY+ +HRDL NVL+ ++ K++DFG+ E
Sbjct: 112 SVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEA---- 167
Query: 339 ALSDDPGTY--RWMAPEMIKHKSYGRKVDVYSFGLILWEMVA-GTIPYEEMNPIQAAFAV 395
+ + D G +W APE ++ K + K DV+SFG++LWE+ + G +PY + P++
Sbjct: 168 SSTQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRI-PLKDVVPR 226
Query: 396 VNKNLRPAIPGDCPPAMAALIEQCWSLQPDKRPEFWHIVKVLEQFET 442
V K + P CPPA+ +++ CW L RP F + + LE +T
Sbjct: 227 VEKGYKMDAPDGCPPAVYEVMKNCWHLDAAMRPSFLQLREQLEHIKT 273
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 135 bits (341), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 70/271 (25%), Positives = 140/271 (51%), Gaps = 13/271 (4%)
Query: 172 DEHTVDLSQLFLGLRFAHGAHSRLYHGIYKDEPVAVKIIRIPDDDENETLAARLEKQFNR 231
D+ ++ + + + + G + +Y G++K + V + + +D T+ ++F +
Sbjct: 213 DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED----TMEV---EEFLK 265
Query: 232 EVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIAL 291
E A++ + +PN+++ + C + P + +ITE+++ G+L YL + + + L+ +A
Sbjct: 266 EAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMAT 325
Query: 292 DIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIACEEVYCDALSDDPGT---YR 348
I+ MEY+ + IHR+L N L+ + +K+ADFG++ + D + G +
Sbjct: 326 QISSAMEYLEKKNFIHRNLAARNCLVGENHLVKVADFGLS-RLMTGDTYTAHAGAKFPIK 384
Query: 349 WMAPEMIKHKSYGRKVDVYSFGLILWEMVA-GTIPYEEMNPIQAAFAVVNKNLRPAIPGD 407
W APE + + + K DV++FG++LWE+ G PY ++ + + ++ K+ R P
Sbjct: 385 WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGID-LSQVYELLEKDYRMERPEG 443
Query: 408 CPPAMAALIEQCWSLQPDKRPEFWHIVKVLE 438
CP + L+ CW P RP F I + E
Sbjct: 444 CPEKVYELMRACWQWNPSDRPSFAEIHQAFE 474
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 135 bits (341), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 71/271 (26%), Positives = 140/271 (51%), Gaps = 13/271 (4%)
Query: 172 DEHTVDLSQLFLGLRFAHGAHSRLYHGIYKDEPVAVKIIRIPDDDENETLAARLEKQFNR 231
D+ ++ + + + + G + +Y G++K + V + + +D T+ ++F +
Sbjct: 11 DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED----TMEV---EEFLK 63
Query: 232 EVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIAL 291
E A++ + +PN+++ + C + P + +ITE+++ G+L YL + + + L+ +A
Sbjct: 64 EAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMAT 123
Query: 292 DIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIACEEVYCDALSDDPGT---YR 348
I+ MEY+ + IHRDL N L+ + +K+ADFG++ + D + G +
Sbjct: 124 QISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLS-RLMTGDTYTAHAGAKFPIK 182
Query: 349 WMAPEMIKHKSYGRKVDVYSFGLILWEMVA-GTIPYEEMNPIQAAFAVVNKNLRPAIPGD 407
W APE + + + K DV++FG++LWE+ G PY ++ + + ++ K+ R P
Sbjct: 183 WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGID-LSQVYELLEKDYRMERPEG 241
Query: 408 CPPAMAALIEQCWSLQPDKRPEFWHIVKVLE 438
CP + L+ CW P RP F I + E
Sbjct: 242 CPEKVYELMRACWQWNPSDRPSFAEIHQAFE 272
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 135 bits (340), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 71/271 (26%), Positives = 140/271 (51%), Gaps = 13/271 (4%)
Query: 172 DEHTVDLSQLFLGLRFAHGAHSRLYHGIYKDEPVAVKIIRIPDDDENETLAARLEKQFNR 231
D+ ++ + + + + G + +Y G++K + V + + +D T+ ++F +
Sbjct: 8 DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED----TMEV---EEFLK 60
Query: 232 EVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIAL 291
E A++ + +PN+++ + C + P + +ITE+++ G+L YL + + + L+ +A
Sbjct: 61 EAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMAT 120
Query: 292 DIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIACEEVYCDALSDDPGT---YR 348
I+ MEY+ + IHRDL N L+ + +K+ADFG++ + D + G +
Sbjct: 121 QISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLS-RLMTGDTYTAHAGAKFPIK 179
Query: 349 WMAPEMIKHKSYGRKVDVYSFGLILWEMVA-GTIPYEEMNPIQAAFAVVNKNLRPAIPGD 407
W APE + + + K DV++FG++LWE+ G PY ++ + + ++ K+ R P
Sbjct: 180 WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGID-LSQVYELLEKDYRMERPEG 238
Query: 408 CPPAMAALIEQCWSLQPDKRPEFWHIVKVLE 438
CP + L+ CW P RP F I + E
Sbjct: 239 CPEKVYELMRACWQWNPSDRPSFAEIHQAFE 269
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 135 bits (340), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 71/271 (26%), Positives = 140/271 (51%), Gaps = 13/271 (4%)
Query: 172 DEHTVDLSQLFLGLRFAHGAHSRLYHGIYKDEPVAVKIIRIPDDDENETLAARLEKQFNR 231
D+ ++ + + + + G + +Y G++K + V + + +D T+ ++F +
Sbjct: 8 DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED----TMEV---EEFLK 60
Query: 232 EVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIAL 291
E A++ + +PN+++ + C + P + +ITE+++ G+L YL + + + L+ +A
Sbjct: 61 EAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMAT 120
Query: 292 DIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIACEEVYCDALSDDPGT---YR 348
I+ MEY+ + IHRDL N L+ + +K+ADFG++ + D + G +
Sbjct: 121 QISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLS-RLMTGDTYTAHAGAKFPIK 179
Query: 349 WMAPEMIKHKSYGRKVDVYSFGLILWEMVA-GTIPYEEMNPIQAAFAVVNKNLRPAIPGD 407
W APE + + + K DV++FG++LWE+ G PY ++ + + ++ K+ R P
Sbjct: 180 WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGID-LSQVYELLEKDYRMERPEG 238
Query: 408 CPPAMAALIEQCWSLQPDKRPEFWHIVKVLE 438
CP + L+ CW P RP F I + E
Sbjct: 239 CPEKVYELMRACWQWNPSDRPSFAEIHQAFE 269
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 135 bits (340), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 71/271 (26%), Positives = 140/271 (51%), Gaps = 13/271 (4%)
Query: 172 DEHTVDLSQLFLGLRFAHGAHSRLYHGIYKDEPVAVKIIRIPDDDENETLAARLEKQFNR 231
D+ ++ + + + + G + +Y G++K + V + + +D T+ ++F +
Sbjct: 7 DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED----TMEV---EEFLK 59
Query: 232 EVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIAL 291
E A++ + +PN+++ + C + P + +ITE+++ G+L YL + + + L+ +A
Sbjct: 60 EAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMAT 119
Query: 292 DIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIACEEVYCDALSDDPGT---YR 348
I+ MEY+ + IHRDL N L+ + +K+ADFG++ + D + G +
Sbjct: 120 QISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLS-RLMTGDTYTAPAGAKFPIK 178
Query: 349 WMAPEMIKHKSYGRKVDVYSFGLILWEMVA-GTIPYEEMNPIQAAFAVVNKNLRPAIPGD 407
W APE + + + K DV++FG++LWE+ G PY ++ + + ++ K+ R P
Sbjct: 179 WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGID-LSQVYELLEKDYRMERPEG 237
Query: 408 CPPAMAALIEQCWSLQPDKRPEFWHIVKVLE 438
CP + L+ CW P RP F I + E
Sbjct: 238 CPEKVYELMRACWQWNPSDRPSFAEIHQAFE 268
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 135 bits (340), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 71/271 (26%), Positives = 140/271 (51%), Gaps = 13/271 (4%)
Query: 172 DEHTVDLSQLFLGLRFAHGAHSRLYHGIYKDEPVAVKIIRIPDDDENETLAARLEKQFNR 231
D+ ++ + + + + G + +Y G++K + V + + +D T+ ++F +
Sbjct: 19 DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED----TMEV---EEFLK 71
Query: 232 EVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIAL 291
E A++ + +PN+++ + C + P + +ITE+++ G+L YL + + + L+ +A
Sbjct: 72 EAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMAT 131
Query: 292 DIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIACEEVYCDALSDDPGT---YR 348
I+ MEY+ + IHRDL N L+ + +K+ADFG++ + D + G +
Sbjct: 132 QISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLS-RLMTGDTYTAHAGAKFPIK 190
Query: 349 WMAPEMIKHKSYGRKVDVYSFGLILWEMVA-GTIPYEEMNPIQAAFAVVNKNLRPAIPGD 407
W APE + + + K DV++FG++LWE+ G PY ++ + + ++ K+ R P
Sbjct: 191 WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGID-LSQVYELLEKDYRMERPEG 249
Query: 408 CPPAMAALIEQCWSLQPDKRPEFWHIVKVLE 438
CP + L+ CW P RP F I + E
Sbjct: 250 CPEKVYELMRACWQWNPSDRPSFAEIHQAFE 280
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 135 bits (340), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 73/297 (24%), Positives = 152/297 (51%), Gaps = 16/297 (5%)
Query: 172 DEHTVDLSQLFLGLRFAHGAHSRLYHGIYKDEPVAVKIIRIPDDDENETLAARLEKQFNR 231
D+ ++ + + + + G + +Y G++K + V + + +D T+ ++F +
Sbjct: 210 DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED----TMEV---EEFLK 262
Query: 232 EVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIAL 291
E A++ + +PN+++ + C + P + +ITE+++ G+L YL + + + L+ +A
Sbjct: 263 EAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMAT 322
Query: 292 DIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIACEEVYCDALSDDPGT---YR 348
I+ MEY+ + IHR+L N L+ + +K+ADFG++ + D + G +
Sbjct: 323 QISSAMEYLEKKNFIHRNLAARNCLVGENHLVKVADFGLS-RLMTGDTYTAHAGAKFPIK 381
Query: 349 WMAPEMIKHKSYGRKVDVYSFGLILWEMVA-GTIPYEEMNPIQAAFAVVNKNLRPAIPGD 407
W APE + + + K DV++FG++LWE+ G PY ++ + + ++ K+ R P
Sbjct: 382 WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGID-LSQVYELLEKDYRMERPEG 440
Query: 408 CPPAMAALIEQCWSLQPDKRPEFWHIVKVLEQFETSLACNGTLNLVQNPICQDHKKG 464
CP + L+ CW P RP F ++ + FET + + V+ + +++ G
Sbjct: 441 CPEKVYELMRACWQWNPSDRPSF---AEIHQAFETMFQESSISDEVEKELGKENLYG 494
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 135 bits (340), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 71/271 (26%), Positives = 140/271 (51%), Gaps = 13/271 (4%)
Query: 172 DEHTVDLSQLFLGLRFAHGAHSRLYHGIYKDEPVAVKIIRIPDDDENETLAARLEKQFNR 231
D+ ++ + + + + G + +Y G++K + V + + +D T+ ++F +
Sbjct: 6 DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED----TMEV---EEFLK 58
Query: 232 EVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIAL 291
E A++ + +PN+++ + C + P + +ITE+++ G+L YL + + + L+ +A
Sbjct: 59 EAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMAT 118
Query: 292 DIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIACEEVYCDALSDDPGT---YR 348
I+ MEY+ + IHRDL N L+ + +K+ADFG++ + D + G +
Sbjct: 119 QISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLS-RLMTGDTYTAHAGAKFPIK 177
Query: 349 WMAPEMIKHKSYGRKVDVYSFGLILWEMVA-GTIPYEEMNPIQAAFAVVNKNLRPAIPGD 407
W APE + + + K DV++FG++LWE+ G PY ++ + + ++ K+ R P
Sbjct: 178 WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGID-LSQVYELLEKDYRMERPEG 236
Query: 408 CPPAMAALIEQCWSLQPDKRPEFWHIVKVLE 438
CP + L+ CW P RP F I + E
Sbjct: 237 CPEKVYELMRACWQWNPSDRPSFAEIHQAFE 267
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 135 bits (340), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 71/271 (26%), Positives = 140/271 (51%), Gaps = 13/271 (4%)
Query: 172 DEHTVDLSQLFLGLRFAHGAHSRLYHGIYKDEPVAVKIIRIPDDDENETLAARLEKQFNR 231
D+ ++ + + + + G + +Y G++K + V + + +D T+ ++F +
Sbjct: 11 DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED----TMEV---EEFLK 63
Query: 232 EVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIAL 291
E A++ + +PN+++ + C + P + +ITE+++ G+L YL + + + L+ +A
Sbjct: 64 EAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMAT 123
Query: 292 DIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIACEEVYCDALSDDPGT---YR 348
I+ MEY+ + IHRDL N L+ + +K+ADFG++ + D + G +
Sbjct: 124 QISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLS-RLMTGDTXTAHAGAKFPIK 182
Query: 349 WMAPEMIKHKSYGRKVDVYSFGLILWEMVA-GTIPYEEMNPIQAAFAVVNKNLRPAIPGD 407
W APE + + + K DV++FG++LWE+ G PY ++ + + ++ K+ R P
Sbjct: 183 WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGID-LSQVYELLEKDYRMERPEG 241
Query: 408 CPPAMAALIEQCWSLQPDKRPEFWHIVKVLE 438
CP + L+ CW P RP F I + E
Sbjct: 242 CPEKVYELMRACWQWNPSDRPSFAEIHQAFE 272
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 135 bits (340), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 71/271 (26%), Positives = 140/271 (51%), Gaps = 13/271 (4%)
Query: 172 DEHTVDLSQLFLGLRFAHGAHSRLYHGIYKDEPVAVKIIRIPDDDENETLAARLEKQFNR 231
D+ ++ + + + + G + +Y G++K + V + + +D T+ ++F +
Sbjct: 11 DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED----TMEV---EEFLK 63
Query: 232 EVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIAL 291
E A++ + +PN+++ + C + P + +ITE+++ G+L YL + + + L+ +A
Sbjct: 64 EAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMAT 123
Query: 292 DIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIACEEVYCDALSDDPGT---YR 348
I+ MEY+ + IHRDL N L+ + +K+ADFG++ + D + G +
Sbjct: 124 QISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLS-RLMTGDTYTAHAGAKFPIK 182
Query: 349 WMAPEMIKHKSYGRKVDVYSFGLILWEMVA-GTIPYEEMNPIQAAFAVVNKNLRPAIPGD 407
W APE + + + K DV++FG++LWE+ G PY ++ + + ++ K+ R P
Sbjct: 183 WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGID-LSQVYELLEKDYRMERPEG 241
Query: 408 CPPAMAALIEQCWSLQPDKRPEFWHIVKVLE 438
CP + L+ CW P RP F I + E
Sbjct: 242 CPEKVYELMRACWQWNPSDRPSFAEIHQAFE 272
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 135 bits (340), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 71/271 (26%), Positives = 140/271 (51%), Gaps = 13/271 (4%)
Query: 172 DEHTVDLSQLFLGLRFAHGAHSRLYHGIYKDEPVAVKIIRIPDDDENETLAARLEKQFNR 231
D+ ++ + + + + G + +Y G++K + V + + +D T+ ++F +
Sbjct: 10 DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED----TMEV---EEFLK 62
Query: 232 EVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIAL 291
E A++ + +PN+++ + C + P + +ITE+++ G+L YL + + + L+ +A
Sbjct: 63 EAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMAT 122
Query: 292 DIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIACEEVYCDALSDDPGT---YR 348
I+ MEY+ + IHRDL N L+ + +K+ADFG++ + D + G +
Sbjct: 123 QISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLS-RLMTGDTYTAHAGAKFPIK 181
Query: 349 WMAPEMIKHKSYGRKVDVYSFGLILWEMVA-GTIPYEEMNPIQAAFAVVNKNLRPAIPGD 407
W APE + + + K DV++FG++LWE+ G PY ++ + + ++ K+ R P
Sbjct: 182 WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGID-LSQVYELLEKDYRMERPEG 240
Query: 408 CPPAMAALIEQCWSLQPDKRPEFWHIVKVLE 438
CP + L+ CW P RP F I + E
Sbjct: 241 CPEKVYELMRACWQWNPSDRPSFAEIHQAFE 271
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 135 bits (339), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 71/271 (26%), Positives = 140/271 (51%), Gaps = 13/271 (4%)
Query: 172 DEHTVDLSQLFLGLRFAHGAHSRLYHGIYKDEPVAVKIIRIPDDDENETLAARLEKQFNR 231
D+ ++ + + + + G + +Y G++K + V + + +D T+ ++F +
Sbjct: 6 DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED----TMEV---EEFLK 58
Query: 232 EVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIAL 291
E A++ + +PN+++ + C + P + +ITE+++ G+L YL + + + L+ +A
Sbjct: 59 EAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMAT 118
Query: 292 DIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIACEEVYCDALSDDPGT---YR 348
I+ MEY+ + IHRDL N L+ + +K+ADFG++ + D + G +
Sbjct: 119 QISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLS-RLMTGDTYTAHAGAKFPIK 177
Query: 349 WMAPEMIKHKSYGRKVDVYSFGLILWEMVA-GTIPYEEMNPIQAAFAVVNKNLRPAIPGD 407
W APE + + + K DV++FG++LWE+ G PY ++ + + ++ K+ R P
Sbjct: 178 WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGID-LSQVYELLEKDYRMERPEG 236
Query: 408 CPPAMAALIEQCWSLQPDKRPEFWHIVKVLE 438
CP + L+ CW P RP F I + E
Sbjct: 237 CPEKVYELMRACWQWNPSDRPSFAEIHQAFE 267
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 135 bits (339), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 71/271 (26%), Positives = 140/271 (51%), Gaps = 13/271 (4%)
Query: 172 DEHTVDLSQLFLGLRFAHGAHSRLYHGIYKDEPVAVKIIRIPDDDENETLAARLEKQFNR 231
D+ ++ + + + + G + +Y G++K + V + + +D T+ ++F +
Sbjct: 8 DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED----TMEV---EEFLK 60
Query: 232 EVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIAL 291
E A++ + +PN+++ + C + P + +ITE+++ G+L YL + + + L+ +A
Sbjct: 61 EAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMAT 120
Query: 292 DIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIACEEVYCDALSDDPGT---YR 348
I+ MEY+ + IHRDL N L+ + +K+ADFG++ + D + G +
Sbjct: 121 QISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLS-RLMTGDTYTAPAGAKFPIK 179
Query: 349 WMAPEMIKHKSYGRKVDVYSFGLILWEMVA-GTIPYEEMNPIQAAFAVVNKNLRPAIPGD 407
W APE + + + K DV++FG++LWE+ G PY ++ + + ++ K+ R P
Sbjct: 180 WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGID-LSQVYELLEKDYRMERPEG 238
Query: 408 CPPAMAALIEQCWSLQPDKRPEFWHIVKVLE 438
CP + L+ CW P RP F I + E
Sbjct: 239 CPEKVYELMRACWQWNPSDRPSFAEIHQAFE 269
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 135 bits (339), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 70/271 (25%), Positives = 140/271 (51%), Gaps = 13/271 (4%)
Query: 172 DEHTVDLSQLFLGLRFAHGAHSRLYHGIYKDEPVAVKIIRIPDDDENETLAARLEKQFNR 231
D+ ++ + + + + G + +Y G++K + V + + +D T+ ++F +
Sbjct: 252 DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED----TMEV---EEFLK 304
Query: 232 EVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIAL 291
E A++ + +PN+++ + C + P + +ITE+++ G+L YL + + + L+ +A
Sbjct: 305 EAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMAT 364
Query: 292 DIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIACEEVYCDALSDDPGT---YR 348
I+ MEY+ + IHR+L N L+ + +K+ADFG++ + D + G +
Sbjct: 365 QISSAMEYLEKKNFIHRNLAARNCLVGENHLVKVADFGLS-RLMTGDTYTAHAGAKFPIK 423
Query: 349 WMAPEMIKHKSYGRKVDVYSFGLILWEMVA-GTIPYEEMNPIQAAFAVVNKNLRPAIPGD 407
W APE + + + K DV++FG++LWE+ G PY ++ + + ++ K+ R P
Sbjct: 424 WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGID-LSQVYELLEKDYRMERPEG 482
Query: 408 CPPAMAALIEQCWSLQPDKRPEFWHIVKVLE 438
CP + L+ CW P RP F I + E
Sbjct: 483 CPEKVYELMRACWQWNPSDRPSFAEIHQAFE 513
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 135 bits (339), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 82/262 (31%), Positives = 134/262 (51%), Gaps = 15/262 (5%)
Query: 186 RFAHGAHSRLYHGIYK-DEPVAVKIIRIPDDDENETLAARLEKQFNREVALLSRLHNPNV 244
R +G ++ G + + VA+K ++ P E+ F E ++ +L + +
Sbjct: 16 RLGNGQFGEVWMGTWNGNTKVAIKTLK-PGTMSPES--------FLEEAQIMKKLKHDKL 66
Query: 245 IKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIALDIARGMEYIHSQG 304
++ A + P+Y ++TEY+++GSL +L E + L LP L+ +A +A GM YI
Sbjct: 67 VQLYAVVSEEPIY-IVTEYMNKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERMN 125
Query: 305 VIHRDLKPENVLIDQEFHLKIADFGIA--CEEVYCDALSDDPGTYRWMAPEMIKHKSYGR 362
IHRDL+ N+L+ KIADFG+A E+ A +W APE + +
Sbjct: 126 YIHRDLRSANILVGNGLICKIADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGRFTI 185
Query: 363 KVDVYSFGLILWEMVA-GTIPYEEMNPIQAAFAVVNKNLRPAIPGDCPPAMAALIEQCWS 421
K DV+SFG++L E+V G +PY MN + V + R P DCP ++ L+ CW
Sbjct: 186 KSDVWSFGILLTELVTKGRVPYPGMNN-REVLEQVERGYRMPCPQDCPISLHELMIHCWK 244
Query: 422 LQPDKRPEFWHIVKVLEQFETS 443
P++RP F ++ LE + T+
Sbjct: 245 KDPEERPTFEYLQSFLEDYFTA 266
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 134 bits (338), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 81/273 (29%), Positives = 141/273 (51%), Gaps = 21/273 (7%)
Query: 175 TVDLSQLFLGLRFAHGAHSRLYHGIYKDEPVAVKIIRIPDDDENETLAARLEKQFNREVA 234
+++ +L L G + G Y+ VAVK I+ N+ A + F E +
Sbjct: 2 ALNMKELKLLQTIGKGEFGDVMLGDYRGNKVAVKCIK------NDATA----QAFLAEAS 51
Query: 235 LLSRLHNPNVIKFVAAC--KKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIALD 292
++++L + N+++ + +K +Y ++TEY+++GSL YL L L+ +LD
Sbjct: 52 VMTQLRHSNLVQLLGVIVEEKGGLY-IVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLD 110
Query: 293 IARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIACEEVYCDALSDDPGTY--RWM 350
+ MEY+ +HRDL NVL+ ++ K++DFG+ E + + D G +W
Sbjct: 111 VCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEA----SSTQDTGKLPVKWT 166
Query: 351 APEMIKHKSYGRKVDVYSFGLILWEMVA-GTIPYEEMNPIQAAFAVVNKNLRPAIPGDCP 409
APE ++ K + K DV+SFG++LWE+ + G +PY + P++ V K + P CP
Sbjct: 167 APEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRI-PLKDVVPRVEKGYKMDAPDGCP 225
Query: 410 PAMAALIEQCWSLQPDKRPEFWHIVKVLEQFET 442
PA+ +++ CW L RP F + + LE +T
Sbjct: 226 PAVYEVMKNCWHLDAAMRPSFLQLREQLEHIKT 258
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 134 bits (338), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 86/290 (29%), Positives = 145/290 (50%), Gaps = 26/290 (8%)
Query: 163 VRVNAVDAADEH-----TVDLSQLFLGLRFAHGAHSRLYHGIYKDEPVAVKIIRIPDDDE 217
V V A DE +++ +L L G + G Y+ VAVK I+
Sbjct: 172 VMEGTVAAQDEFYRSGWALNMKELKLLQTIGKGEFGDVMLGDYRGNKVAVKCIK------ 225
Query: 218 NETLAARLEKQFNREVALLSRLHNPNVIKFVAAC--KKPPVYCVITEYLSEGSLRAYLHK 275
N+ A + F E +++++L + N+++ + +K +Y ++TEY+++GSL YL
Sbjct: 226 NDATA----QAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLY-IVTEYMAKGSLVDYLRS 280
Query: 276 LEHKTLPLPKLIAIALDIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIACEEV 335
L L+ +LD+ MEY+ +HRDL NVL+ ++ K++DFG+ E
Sbjct: 281 RGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEA- 339
Query: 336 YCDALSDDPGTY--RWMAPEMIKHKSYGRKVDVYSFGLILWEMVA-GTIPYEEMNPIQAA 392
+ + D G +W APE ++ K + K DV+SFG++LWE+ + G +PY + P++
Sbjct: 340 ---SSTQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRI-PLKDV 395
Query: 393 FAVVNKNLRPAIPGDCPPAMAALIEQCWSLQPDKRPEFWHIVKVLEQFET 442
V K + P CPPA+ +++ CW L RP F + + LE T
Sbjct: 396 VPRVEKGYKMDAPDGCPPAVYDVMKNCWHLDAATRPTFLQLREQLEHIRT 445
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 134 bits (337), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 70/271 (25%), Positives = 139/271 (51%), Gaps = 13/271 (4%)
Query: 172 DEHTVDLSQLFLGLRFAHGAHSRLYHGIYKDEPVAVKIIRIPDDDENETLAARLEKQFNR 231
D+ ++ + + + + G + +Y G++K + V + + +D T+ ++F +
Sbjct: 6 DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED----TMEV---EEFLK 58
Query: 232 EVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIAL 291
E A++ + +PN+++ + C + P + +I E+++ G+L YL + + + L+ +A
Sbjct: 59 EAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMAT 118
Query: 292 DIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIACEEVYCDALSDDPGT---YR 348
I+ MEY+ + IHRDL N L+ + +K+ADFG++ + D + G +
Sbjct: 119 QISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLS-RLMTGDTYTAHAGAKFPIK 177
Query: 349 WMAPEMIKHKSYGRKVDVYSFGLILWEMVA-GTIPYEEMNPIQAAFAVVNKNLRPAIPGD 407
W APE + + + K DV++FG++LWE+ G PY ++ + + ++ K+ R P
Sbjct: 178 WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGID-LSQVYELLEKDYRMERPEG 236
Query: 408 CPPAMAALIEQCWSLQPDKRPEFWHIVKVLE 438
CP + L+ CW P RP F I + E
Sbjct: 237 CPEKVYELMRACWQWNPSDRPSFAEIHQAFE 267
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 134 bits (336), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 70/271 (25%), Positives = 139/271 (51%), Gaps = 13/271 (4%)
Query: 172 DEHTVDLSQLFLGLRFAHGAHSRLYHGIYKDEPVAVKIIRIPDDDENETLAARLEKQFNR 231
D+ ++ + + + + G + +Y G++K + V + + +D T+ ++F +
Sbjct: 6 DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED----TMEV---EEFLK 58
Query: 232 EVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIAL 291
E A++ + +PN+++ + C + P + +I E+++ G+L YL + + + L+ +A
Sbjct: 59 EAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMAT 118
Query: 292 DIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIACEEVYCDALSDDPGT---YR 348
I+ MEY+ + IHRDL N L+ + +K+ADFG++ + D + G +
Sbjct: 119 QISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLS-RLMTGDTYTAHAGAKFPIK 177
Query: 349 WMAPEMIKHKSYGRKVDVYSFGLILWEMVA-GTIPYEEMNPIQAAFAVVNKNLRPAIPGD 407
W APE + + + K DV++FG++LWE+ G PY ++ + + ++ K+ R P
Sbjct: 178 WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGID-LSQVYELLEKDYRMERPEG 236
Query: 408 CPPAMAALIEQCWSLQPDKRPEFWHIVKVLE 438
CP + L+ CW P RP F I + E
Sbjct: 237 CPEKVYELMRACWQWNPSDRPSFAEIHQAFE 267
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 134 bits (336), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 77/280 (27%), Positives = 136/280 (48%), Gaps = 26/280 (9%)
Query: 172 DEHTVDLSQLFLGLRFAHGAHSRLYHGIYKDEPVAVKIIRIPDDDENETLAARLEKQFNR 231
D + + ++ F RL K+ VA+K +++ + + F
Sbjct: 43 DATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKV-------GYTEKQRRDFLG 95
Query: 232 EVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIAL 291
E +++ + +PN+I+ K ++TE + GSL ++L K + + + +L+ +
Sbjct: 96 EASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQ-FTVIQLVGMLR 154
Query: 292 DIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIACEEVYCDALSDDPGT----- 346
IA GM+Y+ G +HRDL N+LI+ K++DFG++ L DDP
Sbjct: 155 GIASGMKYLSDMGAVHRDLAARNILINSNLVCKVSDFGLS------RVLEDDPEAAYTTR 208
Query: 347 -----YRWMAPEMIKHKSYGRKVDVYSFGLILWEMVA-GTIPYEEMNPIQAAFAVVNKNL 400
RW +PE I ++ + DV+S+G++LWE+++ G PY EM+ Q V++
Sbjct: 209 GGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSN-QDVIKAVDEGY 267
Query: 401 RPAIPGDCPPAMAALIEQCWSLQPDKRPEFWHIVKVLEQF 440
R P DCP A+ L+ CW + RP+F IV +L++
Sbjct: 268 RLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKL 307
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 134 bits (336), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 85/286 (29%), Positives = 149/286 (52%), Gaps = 19/286 (6%)
Query: 169 DAADEHTVDLSQLFLGLRFAHGAHSRLYHGIYKDEPVAVKIIRIPDDDENETLAARLEKQ 228
D++ ++ S++ L R G+ +Y G + + VAVKI+++ D + A
Sbjct: 26 DSSYYWEIEASEVMLSTRIGSGSFGTVYKGKWHGD-VAVKILKVVDPTPEQFQA------ 78
Query: 229 FNREVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIA 288
F EVA+L + + N++ F+ K + ++T++ SL +LH E K + +LI
Sbjct: 79 FRNEVAVLRKTRHVNILLFMGYMTKDNL-AIVTQWCEGSSLYKHLHVQETK-FQMFQLID 136
Query: 289 IALDIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIACEEVYCDA---LSDDPG 345
IA A+GM+Y+H++ +IHRD+K N+ + + +KI DFG+A + + G
Sbjct: 137 IARQTAQGMDYLHAKNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTG 196
Query: 346 TYRWMAPEMIKHKS---YGRKVDVYSFGLILWEMVAGTIPYEEMNP-IQAAFAVVNKNLR 401
+ WMAPE+I+ + + + DVYS+G++L+E++ G +PY +N Q F V
Sbjct: 197 SVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQIIFMVGRGYAS 256
Query: 402 PAIP---GDCPPAMAALIEQCWSLQPDKRPEFWHIVKVLEQFETSL 444
P + +CP AM L+ C ++RP F I+ +E + SL
Sbjct: 257 PDLSKLYKNCPKAMKRLVADCVKKVKEERPLFPQILSSIELLQHSL 302
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 133 bits (335), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 83/278 (29%), Positives = 139/278 (50%), Gaps = 15/278 (5%)
Query: 170 AADEHTVDLSQLFLGLRFAHGAHSRLYHGIYKDEP-VAVKIIRIPDDDENETLAARLEKQ 228
A D + L L ++ G ++ G + VA+K ++ P E
Sbjct: 258 AKDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLK-PGTMSPEA-------- 308
Query: 229 FNREVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIA 288
F +E ++ +L + +++ A + P+Y ++TEY+S+GSL +L K L LP+L+
Sbjct: 309 FLQEAQVMKKLRHEKLVQLYAVVSEEPIY-IVTEYMSKGSLLDFLKGETGKYLRLPQLVD 367
Query: 289 IALDIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIA--CEEVYCDALSDDPGT 346
+A IA GM Y+ +HRDL+ N+L+ + K+ADFG+A E+ A
Sbjct: 368 MAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFP 427
Query: 347 YRWMAPEMIKHKSYGRKVDVYSFGLILWEMVA-GTIPYEEMNPIQAAFAVVNKNLRPAIP 405
+W APE + + K DV+SFG++L E+ G +PY M + V + R P
Sbjct: 428 IKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVN-REVLDQVERGYRMPCP 486
Query: 406 GDCPPAMAALIEQCWSLQPDKRPEFWHIVKVLEQFETS 443
+CP ++ L+ QCW +P++RP F ++ LE + TS
Sbjct: 487 PECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTS 524
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 133 bits (335), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 91/277 (32%), Positives = 135/277 (48%), Gaps = 17/277 (6%)
Query: 172 DEHTVDLSQLFLGLRFAHGAHSRLYHGIYKDEP-VAVKIIRIPDDDENETLAARLEKQFN 230
DE V L L R G ++ G Y VAVK ++ + LA
Sbjct: 14 DEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLA-------- 65
Query: 231 REVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIA 290
E L+ +L + +++ A + P+Y +ITEY+ GSL +L L + KL+ +A
Sbjct: 66 -EANLMKQLQHQRLVRLYAVVTQEPIY-IITEYMENGSLVDFLKTPSGIKLTINKLLDMA 123
Query: 291 LDIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIA--CEEVYCDALSDDPGTYR 348
IA GM +I + IHRDL+ N+L+ KIADFG+A E+ A +
Sbjct: 124 AQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIK 183
Query: 349 WMAPEMIKHKSYGRKVDVYSFGLILWEMVA-GTIPYEEM-NPIQAAFAVVNKNLRPAIPG 406
W APE I + ++ K DV+SFG++L E+V G IPY M NP + + R P
Sbjct: 184 WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNP--EVIQNLERGYRMVRPD 241
Query: 407 DCPPAMAALIEQCWSLQPDKRPEFWHIVKVLEQFETS 443
+CP + L+ CW +P+ RP F ++ VLE F T+
Sbjct: 242 NCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFTA 278
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 133 bits (335), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 80/273 (29%), Positives = 141/273 (51%), Gaps = 21/273 (7%)
Query: 175 TVDLSQLFLGLRFAHGAHSRLYHGIYKDEPVAVKIIRIPDDDENETLAARLEKQFNREVA 234
+++ +L L G + G Y+ VAVK I+ N+ A + F E +
Sbjct: 8 ALNMKELKLLQTIGKGEFGDVMLGDYRGNKVAVKCIK------NDATA----QAFLAEAS 57
Query: 235 LLSRLHNPNVIKFVAAC--KKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIALD 292
++++L + N+++ + +K +Y ++TEY+++GSL YL L L+ +LD
Sbjct: 58 VMTQLRHSNLVQLLGVIVEEKGGLY-IVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLD 116
Query: 293 IARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIACEEVYCDALSDDPGTY--RWM 350
+ MEY+ +HRDL NVL+ ++ K++DFG+ E + + D G +W
Sbjct: 117 VCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEA----SSTQDTGKLPVKWT 172
Query: 351 APEMIKHKSYGRKVDVYSFGLILWEMVA-GTIPYEEMNPIQAAFAVVNKNLRPAIPGDCP 409
APE ++ ++ K DV+SFG++LWE+ + G +PY + P++ V K + P CP
Sbjct: 173 APEALREAAFSTKSDVWSFGILLWEIYSFGRVPYPRI-PLKDVVPRVEKGYKMDAPDGCP 231
Query: 410 PAMAALIEQCWSLQPDKRPEFWHIVKVLEQFET 442
PA+ +++ CW L RP F + + LE +T
Sbjct: 232 PAVYEVMKNCWHLDAAMRPSFLQLREQLEHIKT 264
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 133 bits (335), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 77/280 (27%), Positives = 136/280 (48%), Gaps = 26/280 (9%)
Query: 172 DEHTVDLSQLFLGLRFAHGAHSRLYHGIYKDEPVAVKIIRIPDDDENETLAARLEKQFNR 231
D + + ++ F RL K+ VA+K +++ + + F
Sbjct: 14 DATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVG-------YTEKQRRDFLG 66
Query: 232 EVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIAL 291
E +++ + +PN+I+ K ++TE + GSL ++L K + + + +L+ +
Sbjct: 67 EASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQ-FTVIQLVGMLR 125
Query: 292 DIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIACEEVYCDALSDDPGT----- 346
IA GM+Y+ G +HRDL N+LI+ K++DFG++ L DDP
Sbjct: 126 GIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLS------RVLEDDPEAAYTTR 179
Query: 347 -----YRWMAPEMIKHKSYGRKVDVYSFGLILWEMVA-GTIPYEEMNPIQAAFAVVNKNL 400
RW +PE I ++ + DV+S+G++LWE+++ G PY EM+ Q V++
Sbjct: 180 GGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSN-QDVIKAVDEGY 238
Query: 401 RPAIPGDCPPAMAALIEQCWSLQPDKRPEFWHIVKVLEQF 440
R P DCP A+ L+ CW + RP+F IV +L++
Sbjct: 239 RLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKL 278
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 133 bits (335), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 91/277 (32%), Positives = 135/277 (48%), Gaps = 17/277 (6%)
Query: 172 DEHTVDLSQLFLGLRFAHGAHSRLYHGIYKDEP-VAVKIIRIPDDDENETLAARLEKQFN 230
DE V L L R G ++ G Y VAVK ++ + LA
Sbjct: 7 DEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLA-------- 58
Query: 231 REVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIA 290
E L+ +L + +++ A + P+Y +ITEY+ GSL +L L + KL+ +A
Sbjct: 59 -EANLMKQLQHQRLVRLYAVVTQEPIY-IITEYMENGSLVDFLKTPSGIKLTINKLLDMA 116
Query: 291 LDIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIA--CEEVYCDALSDDPGTYR 348
IA GM +I + IHRDL+ N+L+ KIADFG+A E+ A +
Sbjct: 117 AQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIK 176
Query: 349 WMAPEMIKHKSYGRKVDVYSFGLILWEMVA-GTIPYEEM-NPIQAAFAVVNKNLRPAIPG 406
W APE I + ++ K DV+SFG++L E+V G IPY M NP + + R P
Sbjct: 177 WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNP--EVIQNLERGYRMVRPD 234
Query: 407 DCPPAMAALIEQCWSLQPDKRPEFWHIVKVLEQFETS 443
+CP + L+ CW +P+ RP F ++ VLE F T+
Sbjct: 235 NCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFTA 271
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 133 bits (334), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 91/277 (32%), Positives = 135/277 (48%), Gaps = 17/277 (6%)
Query: 172 DEHTVDLSQLFLGLRFAHGAHSRLYHGIYKDEP-VAVKIIRIPDDDENETLAARLEKQFN 230
DE V L L R G ++ G Y VAVK ++ + LA
Sbjct: 12 DEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLA-------- 63
Query: 231 REVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIA 290
E L+ +L + +++ A + P+Y +ITEY+ GSL +L L + KL+ +A
Sbjct: 64 -EANLMKQLQHQRLVRLYAVVTQEPIY-IITEYMENGSLVDFLKTPSGIKLTINKLLDMA 121
Query: 291 LDIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIA--CEEVYCDALSDDPGTYR 348
IA GM +I + IHRDL+ N+L+ KIADFG+A E+ A +
Sbjct: 122 AQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIK 181
Query: 349 WMAPEMIKHKSYGRKVDVYSFGLILWEMVA-GTIPYEEM-NPIQAAFAVVNKNLRPAIPG 406
W APE I + ++ K DV+SFG++L E+V G IPY M NP + + R P
Sbjct: 182 WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNP--EVIQNLERGYRMVRPD 239
Query: 407 DCPPAMAALIEQCWSLQPDKRPEFWHIVKVLEQFETS 443
+CP + L+ CW +P+ RP F ++ VLE F T+
Sbjct: 240 NCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFTA 276
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 133 bits (334), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 73/277 (26%), Positives = 142/277 (51%), Gaps = 16/277 (5%)
Query: 170 AADEHTVDLSQLFLGLRFAHGAHSRLYHGIYKDEPVAVKIIRIPDDDENETLAARLEKQF 229
+ D+ ++ + + + + G + +Y G++K + V + + +D T+ ++F
Sbjct: 23 SMDKWEMERTDITMKHKLGGGQYGEVYVGVWKKYSLTVAVKTLKED----TMEV---EEF 75
Query: 230 NREVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAI 289
+E A++ + +PN+++ + C P + ++TEY+ G+L YL + + + L+ +
Sbjct: 76 LKEAAVMKEIKHPNLVQLLGVCTLEPPFYIVTEYMPYGNLLDYLRECNREEVTAVVLLYM 135
Query: 290 ALDIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIACEEVYCDALSDDPGT--- 346
A I+ MEY+ + IHRDL N L+ + +K+ADFG++ + D + G
Sbjct: 136 ATQISSAMEYLEKKNFIHRDLAARNCLVGENHVVKVADFGLS-RLMTGDTYTAHAGAKFP 194
Query: 347 YRWMAPEMIKHKSYGRKVDVYSFGLILWEMVA-GTIPYEEMNPIQAAFAVVNKNLRPAIP 405
+W APE + + ++ K DV++FG++LWE+ G PY ++ + + ++ K R P
Sbjct: 195 IKWTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSPYPGID-LSQVYDLLEKGYRMEQP 253
Query: 406 GDCPPAMAALIEQCWSLQPDKRPEFWHIVKVLEQFET 442
CPP + L+ CW P RP F + + FET
Sbjct: 254 EGCPPKVYELMRACWKWSPADRPSF---AETHQAFET 287
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 133 bits (334), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 91/277 (32%), Positives = 135/277 (48%), Gaps = 17/277 (6%)
Query: 172 DEHTVDLSQLFLGLRFAHGAHSRLYHGIYKDEP-VAVKIIRIPDDDENETLAARLEKQFN 230
DE V L L R G ++ G Y VAVK ++ + LA
Sbjct: 6 DEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLA-------- 57
Query: 231 REVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIA 290
E L+ +L + +++ A + P+Y +ITEY+ GSL +L L + KL+ +A
Sbjct: 58 -EANLMKQLQHQRLVRLYAVVTQEPIY-IITEYMENGSLVDFLKTPSGIKLTINKLLDMA 115
Query: 291 LDIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIA--CEEVYCDALSDDPGTYR 348
IA GM +I + IHRDL+ N+L+ KIADFG+A E+ A +
Sbjct: 116 AQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIK 175
Query: 349 WMAPEMIKHKSYGRKVDVYSFGLILWEMVA-GTIPYEEM-NPIQAAFAVVNKNLRPAIPG 406
W APE I + ++ K DV+SFG++L E+V G IPY M NP + + R P
Sbjct: 176 WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNP--EVIQNLERGYRMVRPD 233
Query: 407 DCPPAMAALIEQCWSLQPDKRPEFWHIVKVLEQFETS 443
+CP + L+ CW +P+ RP F ++ VLE F T+
Sbjct: 234 NCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFTA 270
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 133 bits (334), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 91/277 (32%), Positives = 135/277 (48%), Gaps = 17/277 (6%)
Query: 172 DEHTVDLSQLFLGLRFAHGAHSRLYHGIYKDEP-VAVKIIRIPDDDENETLAARLEKQFN 230
DE V L L R G ++ G Y VAVK ++ + LA
Sbjct: 15 DEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLA-------- 66
Query: 231 REVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIA 290
E L+ +L + +++ A + P+Y +ITEY+ GSL +L L + KL+ +A
Sbjct: 67 -EANLMKQLQHQRLVRLYAVVTQEPIY-IITEYMENGSLVDFLKTPSGIKLTINKLLDMA 124
Query: 291 LDIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIA--CEEVYCDALSDDPGTYR 348
IA GM +I + IHRDL+ N+L+ KIADFG+A E+ A +
Sbjct: 125 AQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIK 184
Query: 349 WMAPEMIKHKSYGRKVDVYSFGLILWEMVA-GTIPYEEM-NPIQAAFAVVNKNLRPAIPG 406
W APE I + ++ K DV+SFG++L E+V G IPY M NP + + R P
Sbjct: 185 WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNP--EVIQNLERGYRMVRPD 242
Query: 407 DCPPAMAALIEQCWSLQPDKRPEFWHIVKVLEQFETS 443
+CP + L+ CW +P+ RP F ++ VLE F T+
Sbjct: 243 NCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFTA 279
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 133 bits (334), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 91/277 (32%), Positives = 135/277 (48%), Gaps = 17/277 (6%)
Query: 172 DEHTVDLSQLFLGLRFAHGAHSRLYHGIYKDEP-VAVKIIRIPDDDENETLAARLEKQFN 230
DE V L L R G ++ G Y VAVK ++ + LA
Sbjct: 11 DEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLA-------- 62
Query: 231 REVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIA 290
E L+ +L + +++ A + P+Y +ITEY+ GSL +L L + KL+ +A
Sbjct: 63 -EANLMKQLQHQRLVRLYAVVTQEPIY-IITEYMENGSLVDFLKTPSGIKLTINKLLDMA 120
Query: 291 LDIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIA--CEEVYCDALSDDPGTYR 348
IA GM +I + IHRDL+ N+L+ KIADFG+A E+ A +
Sbjct: 121 AQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIK 180
Query: 349 WMAPEMIKHKSYGRKVDVYSFGLILWEMVA-GTIPYEEM-NPIQAAFAVVNKNLRPAIPG 406
W APE I + ++ K DV+SFG++L E+V G IPY M NP + + R P
Sbjct: 181 WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNP--EVIQNLERGYRMVRPD 238
Query: 407 DCPPAMAALIEQCWSLQPDKRPEFWHIVKVLEQFETS 443
+CP + L+ CW +P+ RP F ++ VLE F T+
Sbjct: 239 NCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFTA 275
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 133 bits (334), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 91/277 (32%), Positives = 135/277 (48%), Gaps = 17/277 (6%)
Query: 172 DEHTVDLSQLFLGLRFAHGAHSRLYHGIYKDEP-VAVKIIRIPDDDENETLAARLEKQFN 230
DE V L L R G ++ G Y VAVK ++ + LA
Sbjct: 12 DEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLA-------- 63
Query: 231 REVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIA 290
E L+ +L + +++ A + P+Y +ITEY+ GSL +L L + KL+ +A
Sbjct: 64 -EANLMKQLQHQRLVRLYAVVTQEPIY-IITEYMENGSLVDFLKTPSGIKLTINKLLDMA 121
Query: 291 LDIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIA--CEEVYCDALSDDPGTYR 348
IA GM +I + IHRDL+ N+L+ KIADFG+A E+ A +
Sbjct: 122 AQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIK 181
Query: 349 WMAPEMIKHKSYGRKVDVYSFGLILWEMVA-GTIPYEEM-NPIQAAFAVVNKNLRPAIPG 406
W APE I + ++ K DV+SFG++L E+V G IPY M NP + + R P
Sbjct: 182 WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNP--EVIQNLERGYRMVRPD 239
Query: 407 DCPPAMAALIEQCWSLQPDKRPEFWHIVKVLEQFETS 443
+CP + L+ CW +P+ RP F ++ VLE F T+
Sbjct: 240 NCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFTA 276
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 133 bits (334), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 79/217 (36%), Positives = 118/217 (54%), Gaps = 13/217 (5%)
Query: 229 FNREVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIA 288
F E ++ L + ++K A K P+Y +ITE++++GSL +L E PLPKLI
Sbjct: 224 FLAEANVMKTLQHDKLVKLHAVVTKEPIY-IITEFMAKGSLLDFLKSDEGSKQPLPKLID 282
Query: 289 IALDIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIACEEVYCDALSDDPGTYR 348
+ IA GM +I + IHRDL+ N+L+ KIADFG+A + P +
Sbjct: 283 FSAQIAEGMAFIEQRNYIHRDLRAANILVSASLVCKIADFGLA------RVGAKFP--IK 334
Query: 349 WMAPEMIKHKSYGRKVDVYSFGLILWEMVA-GTIPYEEM-NPIQAAFAVVNKNLRPAIPG 406
W APE I S+ K DV+SFG++L E+V G IPY M NP + + R P
Sbjct: 335 WTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNP--EVIRALERGYRMPRPE 392
Query: 407 DCPPAMAALIEQCWSLQPDKRPEFWHIVKVLEQFETS 443
+CP + ++ +CW +P++RP F +I VL+ F T+
Sbjct: 393 NCPEELYNIMMRCWKNRPEERPTFEYIQSVLDDFYTA 429
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 133 bits (334), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 91/277 (32%), Positives = 135/277 (48%), Gaps = 17/277 (6%)
Query: 172 DEHTVDLSQLFLGLRFAHGAHSRLYHGIYKDEP-VAVKIIRIPDDDENETLAARLEKQFN 230
DE V L L R G ++ G Y VAVK ++ + LA
Sbjct: 6 DEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLA-------- 57
Query: 231 REVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIA 290
E L+ +L + +++ A + P+Y +ITEY+ GSL +L L + KL+ +A
Sbjct: 58 -EANLMKQLQHQRLVRLYAVVTQEPIY-IITEYMENGSLVDFLKTPSGIKLTINKLLDMA 115
Query: 291 LDIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIA--CEEVYCDALSDDPGTYR 348
IA GM +I + IHRDL+ N+L+ KIADFG+A E+ A +
Sbjct: 116 AQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIK 175
Query: 349 WMAPEMIKHKSYGRKVDVYSFGLILWEMVA-GTIPYEEM-NPIQAAFAVVNKNLRPAIPG 406
W APE I + ++ K DV+SFG++L E+V G IPY M NP + + R P
Sbjct: 176 WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNP--EVIQNLERGYRMVRPD 233
Query: 407 DCPPAMAALIEQCWSLQPDKRPEFWHIVKVLEQFETS 443
+CP + L+ CW +P+ RP F ++ VLE F T+
Sbjct: 234 NCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFTA 270
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 133 bits (334), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 91/277 (32%), Positives = 135/277 (48%), Gaps = 17/277 (6%)
Query: 172 DEHTVDLSQLFLGLRFAHGAHSRLYHGIYKDEP-VAVKIIRIPDDDENETLAARLEKQFN 230
DE V L L R G ++ G Y VAVK ++ + LA
Sbjct: 6 DEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLA-------- 57
Query: 231 REVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIA 290
E L+ +L + +++ A + P+Y +ITEY+ GSL +L L + KL+ +A
Sbjct: 58 -EANLMKQLQHQRLVRLYAVVTQEPIY-IITEYMENGSLVDFLKTPSGIKLTINKLLDMA 115
Query: 291 LDIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIA--CEEVYCDALSDDPGTYR 348
IA GM +I + IHRDL+ N+L+ KIADFG+A E+ A +
Sbjct: 116 AQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIK 175
Query: 349 WMAPEMIKHKSYGRKVDVYSFGLILWEMVA-GTIPYEEM-NPIQAAFAVVNKNLRPAIPG 406
W APE I + ++ K DV+SFG++L E+V G IPY M NP + + R P
Sbjct: 176 WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNP--EVIQNLERGYRMVRPD 233
Query: 407 DCPPAMAALIEQCWSLQPDKRPEFWHIVKVLEQFETS 443
+CP + L+ CW +P+ RP F ++ VLE F T+
Sbjct: 234 NCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFTA 270
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 133 bits (334), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 70/271 (25%), Positives = 139/271 (51%), Gaps = 13/271 (4%)
Query: 172 DEHTVDLSQLFLGLRFAHGAHSRLYHGIYKDEPVAVKIIRIPDDDENETLAARLEKQFNR 231
D+ ++ + + + + G + +Y G++K + V + + +D T+ ++F +
Sbjct: 7 DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED----TMEV---EEFLK 59
Query: 232 EVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIAL 291
E A++ + +PN+++ + C + P + +I E+++ G+L YL + + + L+ +A
Sbjct: 60 EAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMAT 119
Query: 292 DIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIACEEVYCDALSDDPGT---YR 348
I+ MEY+ + IHRDL N L+ + +K+ADFG++ + D + G +
Sbjct: 120 QISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLS-RLMTGDTXTAHAGAKFPIK 178
Query: 349 WMAPEMIKHKSYGRKVDVYSFGLILWEMVA-GTIPYEEMNPIQAAFAVVNKNLRPAIPGD 407
W APE + + + K DV++FG++LWE+ G PY ++ + + ++ K+ R P
Sbjct: 179 WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGID-LSQVYELLEKDYRMERPEG 237
Query: 408 CPPAMAALIEQCWSLQPDKRPEFWHIVKVLE 438
CP + L+ CW P RP F I + E
Sbjct: 238 CPEKVYELMRACWQWNPSDRPSFAEIHQAFE 268
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 133 bits (334), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 77/280 (27%), Positives = 136/280 (48%), Gaps = 26/280 (9%)
Query: 172 DEHTVDLSQLFLGLRFAHGAHSRLYHGIYKDEPVAVKIIRIPDDDENETLAARLEKQFNR 231
D + + ++ F RL K+ VA+K +++ + + F
Sbjct: 43 DATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKV-------GYTEKQRRDFLG 95
Query: 232 EVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIAL 291
E +++ + +PN+I+ K ++TE + GSL ++L K + + + +L+ +
Sbjct: 96 EASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQ-FTVIQLVGMLR 154
Query: 292 DIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIACEEVYCDALSDDPGT----- 346
IA GM+Y+ G +HRDL N+LI+ K++DFG++ L DDP
Sbjct: 155 GIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLS------RVLEDDPEAAYTTR 208
Query: 347 -----YRWMAPEMIKHKSYGRKVDVYSFGLILWEMVA-GTIPYEEMNPIQAAFAVVNKNL 400
RW +PE I ++ + DV+S+G++LWE+++ G PY EM+ Q V++
Sbjct: 209 GGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSN-QDVIKAVDEGY 267
Query: 401 RPAIPGDCPPAMAALIEQCWSLQPDKRPEFWHIVKVLEQF 440
R P DCP A+ L+ CW + RP+F IV +L++
Sbjct: 268 RLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKL 307
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 133 bits (334), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 91/277 (32%), Positives = 135/277 (48%), Gaps = 17/277 (6%)
Query: 172 DEHTVDLSQLFLGLRFAHGAHSRLYHGIYKDEP-VAVKIIRIPDDDENETLAARLEKQFN 230
DE V L L R G ++ G Y VAVK ++ + LA
Sbjct: 8 DEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLA-------- 59
Query: 231 REVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIA 290
E L+ +L + +++ A + P+Y +ITEY+ GSL +L L + KL+ +A
Sbjct: 60 -EANLMKQLQHQRLVRLYAVVTQEPIY-IITEYMENGSLVDFLKTPSGIKLTINKLLDMA 117
Query: 291 LDIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIA--CEEVYCDALSDDPGTYR 348
IA GM +I + IHRDL+ N+L+ KIADFG+A E+ A +
Sbjct: 118 AQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIK 177
Query: 349 WMAPEMIKHKSYGRKVDVYSFGLILWEMVA-GTIPYEEM-NPIQAAFAVVNKNLRPAIPG 406
W APE I + ++ K DV+SFG++L E+V G IPY M NP + + R P
Sbjct: 178 WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNP--EVIQNLERGYRMVRPD 235
Query: 407 DCPPAMAALIEQCWSLQPDKRPEFWHIVKVLEQFETS 443
+CP + L+ CW +P+ RP F ++ VLE F T+
Sbjct: 236 NCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFTA 272
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 133 bits (334), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 91/277 (32%), Positives = 135/277 (48%), Gaps = 17/277 (6%)
Query: 172 DEHTVDLSQLFLGLRFAHGAHSRLYHGIYKDEP-VAVKIIRIPDDDENETLAARLEKQFN 230
DE V L L R G ++ G Y VAVK ++ + LA
Sbjct: 16 DEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLA-------- 67
Query: 231 REVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIA 290
E L+ +L + +++ A + P+Y +ITEY+ GSL +L L + KL+ +A
Sbjct: 68 -EANLMKQLQHQRLVRLYAVVTQEPIY-IITEYMENGSLVDFLKTPSGIKLTINKLLDMA 125
Query: 291 LDIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIA--CEEVYCDALSDDPGTYR 348
IA GM +I + IHRDL+ N+L+ KIADFG+A E+ A +
Sbjct: 126 AQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIK 185
Query: 349 WMAPEMIKHKSYGRKVDVYSFGLILWEMVA-GTIPYEEM-NPIQAAFAVVNKNLRPAIPG 406
W APE I + ++ K DV+SFG++L E+V G IPY M NP + + R P
Sbjct: 186 WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNP--EVIQNLERGYRMVRPD 243
Query: 407 DCPPAMAALIEQCWSLQPDKRPEFWHIVKVLEQFETS 443
+CP + L+ CW +P+ RP F ++ VLE F T+
Sbjct: 244 NCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFTA 280
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 133 bits (334), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 70/271 (25%), Positives = 139/271 (51%), Gaps = 13/271 (4%)
Query: 172 DEHTVDLSQLFLGLRFAHGAHSRLYHGIYKDEPVAVKIIRIPDDDENETLAARLEKQFNR 231
D+ ++ + + + + G + +Y G++K + V + + +D T+ ++F +
Sbjct: 11 DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED----TMEV---EEFLK 63
Query: 232 EVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIAL 291
E A++ + +PN+++ + C + P + +I E+++ G+L YL + + + L+ +A
Sbjct: 64 EAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMAT 123
Query: 292 DIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIACEEVYCDALSDDPGT---YR 348
I+ MEY+ + IHRDL N L+ + +K+ADFG++ + D + G +
Sbjct: 124 QISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLS-RLMTGDTYTAHAGAKFPIK 182
Query: 349 WMAPEMIKHKSYGRKVDVYSFGLILWEMVA-GTIPYEEMNPIQAAFAVVNKNLRPAIPGD 407
W APE + + + K DV++FG++LWE+ G PY ++ + + ++ K+ R P
Sbjct: 183 WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGID-LSQVYELLEKDYRMERPEG 241
Query: 408 CPPAMAALIEQCWSLQPDKRPEFWHIVKVLE 438
CP + L+ CW P RP F I + E
Sbjct: 242 CPEKVYELMRACWQWNPSDRPSFAEIHQAFE 272
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 133 bits (334), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 83/278 (29%), Positives = 139/278 (50%), Gaps = 15/278 (5%)
Query: 170 AADEHTVDLSQLFLGLRFAHGAHSRLYHGIYKDEP-VAVKIIRIPDDDENETLAARLEKQ 228
A D + L L ++ G ++ G + VA+K ++ P E
Sbjct: 175 AKDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLK-PGTMSPEA-------- 225
Query: 229 FNREVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIA 288
F +E ++ +L + +++ A + P+Y ++TEY+S+GSL +L K L LP+L+
Sbjct: 226 FLQEAQVMKKLRHEKLVQLYAVVSEEPIY-IVTEYMSKGSLLDFLKGETGKYLRLPQLVD 284
Query: 289 IALDIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIA--CEEVYCDALSDDPGT 346
+A IA GM Y+ +HRDL+ N+L+ + K+ADFG+A E+ A
Sbjct: 285 MAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFP 344
Query: 347 YRWMAPEMIKHKSYGRKVDVYSFGLILWEMVA-GTIPYEEMNPIQAAFAVVNKNLRPAIP 405
+W APE + + K DV+SFG++L E+ G +PY M + V + R P
Sbjct: 345 IKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVN-REVLDQVERGYRMPCP 403
Query: 406 GDCPPAMAALIEQCWSLQPDKRPEFWHIVKVLEQFETS 443
+CP ++ L+ QCW +P++RP F ++ LE + TS
Sbjct: 404 PECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTS 441
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 132 bits (333), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 91/277 (32%), Positives = 135/277 (48%), Gaps = 17/277 (6%)
Query: 172 DEHTVDLSQLFLGLRFAHGAHSRLYHGIYKDEP-VAVKIIRIPDDDENETLAARLEKQFN 230
DE V L L R G ++ G Y VAVK ++ + LA
Sbjct: 1 DEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLA-------- 52
Query: 231 REVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIA 290
E L+ +L + +++ A + P+Y +ITEY+ GSL +L L + KL+ +A
Sbjct: 53 -EANLMKQLQHQRLVRLYAVVTQEPIY-IITEYMENGSLVDFLKTPSGIKLTINKLLDMA 110
Query: 291 LDIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIA--CEEVYCDALSDDPGTYR 348
IA GM +I + IHRDL+ N+L+ KIADFG+A E+ A +
Sbjct: 111 AQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIK 170
Query: 349 WMAPEMIKHKSYGRKVDVYSFGLILWEMVA-GTIPYEEM-NPIQAAFAVVNKNLRPAIPG 406
W APE I + ++ K DV+SFG++L E+V G IPY M NP + + R P
Sbjct: 171 WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNP--EVIQNLERGYRMVRPD 228
Query: 407 DCPPAMAALIEQCWSLQPDKRPEFWHIVKVLEQFETS 443
+CP + L+ CW +P+ RP F ++ VLE F T+
Sbjct: 229 NCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFTA 265
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 132 bits (333), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 83/278 (29%), Positives = 139/278 (50%), Gaps = 15/278 (5%)
Query: 170 AADEHTVDLSQLFLGLRFAHGAHSRLYHGIYKDEP-VAVKIIRIPDDDENETLAARLEKQ 228
A D + L L ++ G ++ G + VA+K ++ P E
Sbjct: 175 AKDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLK-PGTMSPEA-------- 225
Query: 229 FNREVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIA 288
F +E ++ +L + +++ A + P+Y ++TEY+S+GSL +L K L LP+L+
Sbjct: 226 FLQEAQVMKKLRHEKLVQLYAVVSEEPIY-IVTEYMSKGSLLDFLKGETGKYLRLPQLVD 284
Query: 289 IALDIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIA--CEEVYCDALSDDPGT 346
+A IA GM Y+ +HRDL+ N+L+ + K+ADFG+A E+ A
Sbjct: 285 MAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFP 344
Query: 347 YRWMAPEMIKHKSYGRKVDVYSFGLILWEMVA-GTIPYEEMNPIQAAFAVVNKNLRPAIP 405
+W APE + + K DV+SFG++L E+ G +PY M + V + R P
Sbjct: 345 IKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVN-REVLDQVERGYRMPCP 403
Query: 406 GDCPPAMAALIEQCWSLQPDKRPEFWHIVKVLEQFETS 443
+CP ++ L+ QCW +P++RP F ++ LE + TS
Sbjct: 404 PECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTS 441
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 132 bits (333), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 81/271 (29%), Positives = 133/271 (49%), Gaps = 38/271 (14%)
Query: 190 GAHSRLYHGIYK------DEPVAVKIIRIPDDDENETLAARLEKQ---FNREVALLSRLH 240
G +Y G+ K + PVA+K ++ A EKQ F E ++ +
Sbjct: 55 GEFGEVYKGMLKTSSGKKEVPVAIKTLK----------AGYTEKQRVDFLGEAGIMGQFS 104
Query: 241 NPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIALDIARGMEYI 300
+ N+I+ K +ITEY+ G+L +L + + + + +L+ + IA GM+Y+
Sbjct: 105 HHNIIRLEGVISKYKPMMIITEYMENGALDKFLREKDGE-FSVLQLVGMLRGIAAGMKYL 163
Query: 301 HSQGVIHRDLKPENVLIDQEFHLKIADFGIACEEVYCDALSDDP-GTY---------RWM 350
+ +HRDL N+L++ K++DFG++ L DDP TY RW
Sbjct: 164 ANMNYVHRDLAARNILVNSNLVCKVSDFGLS------RVLEDDPEATYTTSGGKIPIRWT 217
Query: 351 APEMIKHKSYGRKVDVYSFGLILWE-MVAGTIPYEEMNPIQAAFAVVNKNLRPAIPGDCP 409
APE I ++ + DV+SFG+++WE M G PY E++ +N R P DCP
Sbjct: 218 APEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSN-HEVMKAINDGFRLPTPMDCP 276
Query: 410 PAMAALIEQCWSLQPDKRPEFWHIVKVLEQF 440
A+ L+ QCW + +RP+F IV +L++
Sbjct: 277 SAIYQLMMQCWQQERARRPKFADIVSILDKL 307
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 132 bits (331), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 83/278 (29%), Positives = 139/278 (50%), Gaps = 15/278 (5%)
Query: 170 AADEHTVDLSQLFLGLRFAHGAHSRLYHGIYKDEP-VAVKIIRIPDDDENETLAARLEKQ 228
A D + L L ++ G ++ G + VA+K ++ P E
Sbjct: 2 AKDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLK-PGTMSPEA-------- 52
Query: 229 FNREVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIA 288
F +E ++ +L + +++ A + P+Y ++TEY+S+GSL +L K L LP+L+
Sbjct: 53 FLQEAQVMKKLRHEKLVQLYAVVSEEPIY-IVTEYMSKGSLLDFLKGETGKYLRLPQLVD 111
Query: 289 IALDIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIA--CEEVYCDALSDDPGT 346
+A IA GM Y+ +HRDL+ N+L+ + K+ADFG+A E+ A
Sbjct: 112 MAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFP 171
Query: 347 YRWMAPEMIKHKSYGRKVDVYSFGLILWEMVA-GTIPYEEMNPIQAAFAVVNKNLRPAIP 405
+W APE + + K DV+SFG++L E+ G +PY M + V + R P
Sbjct: 172 IKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVN-REVLDQVERGYRMPCP 230
Query: 406 GDCPPAMAALIEQCWSLQPDKRPEFWHIVKVLEQFETS 443
+CP ++ L+ QCW +P++RP F ++ LE + TS
Sbjct: 231 PECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTS 268
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 131 bits (330), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 90/277 (32%), Positives = 134/277 (48%), Gaps = 17/277 (6%)
Query: 172 DEHTVDLSQLFLGLRFAHGAHSRLYHGIYKDEP-VAVKIIRIPDDDENETLAARLEKQFN 230
D V L L R G ++ G Y VAVK ++ + LA
Sbjct: 6 DAWEVPRETLKLVERLGAGQAGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLA-------- 57
Query: 231 REVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIA 290
E L+ +L + +++ A + P+Y +ITEY+ GSL +L L + KL+ +A
Sbjct: 58 -EANLMKQLQHQRLVRLYAVVTQEPIY-IITEYMENGSLVDFLKTPSGIKLTINKLLDMA 115
Query: 291 LDIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIA--CEEVYCDALSDDPGTYR 348
IA GM +I + IHRDL+ N+L+ KIADFG+A E+ A +
Sbjct: 116 AQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDAEXTAREGAKFPIK 175
Query: 349 WMAPEMIKHKSYGRKVDVYSFGLILWEMVA-GTIPYEEM-NPIQAAFAVVNKNLRPAIPG 406
W APE I + ++ K DV+SFG++L E+V G IPY M NP + + R P
Sbjct: 176 WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNP--EVIQNLERGYRMVRPD 233
Query: 407 DCPPAMAALIEQCWSLQPDKRPEFWHIVKVLEQFETS 443
+CP + L+ CW +P+ RP F ++ VLE F T+
Sbjct: 234 NCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFTA 270
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 131 bits (330), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 84/287 (29%), Positives = 136/287 (47%), Gaps = 41/287 (14%)
Query: 187 FAHGAHSRLYH----GIYKDEP---VAVKIIRIPDDDENETLAARLEKQFNREVALLSRL 239
GA R++ G+ EP VAVK+++ E +A ++ F RE AL++
Sbjct: 55 IGEGAFGRVFQARAPGLLPYEPFTMVAVKMLK-------EEASADMQADFQREAALMAEF 107
Query: 240 HNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKT------------------- 280
NPN++K + C C++ EY++ G L +L + T
Sbjct: 108 DNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPG 167
Query: 281 ---LPLPKLIAIALDIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIA---CEE 334
L + + IA +A GM Y+ + +HRDL N L+ + +KIADFG++
Sbjct: 168 PPPLSCAEQLCIARQVAAGMAYLSERKFVHRDLATRNCLVGENMVVKIADFGLSRNIYSA 227
Query: 335 VYCDALSDDPGTYRWMAPEMIKHKSYGRKVDVYSFGLILWEMVA-GTIPYEEMNPIQAAF 393
Y A +D RWM PE I + Y + DV+++G++LWE+ + G PY M + +
Sbjct: 228 DYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGMAHEEVIY 287
Query: 394 AVVNKNLRPAIPGDCPPAMAALIEQCWSLQPDKRPEFWHIVKVLEQF 440
V + N+ A P +CP + L+ CWS P RP F I ++L++
Sbjct: 288 YVRDGNIL-ACPENCPLELYNLMRLCWSKLPADRPSFCSIHRILQRM 333
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 131 bits (330), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 82/278 (29%), Positives = 138/278 (49%), Gaps = 15/278 (5%)
Query: 170 AADEHTVDLSQLFLGLRFAHGAHSRLYHGIYKDEP-VAVKIIRIPDDDENETLAARLEKQ 228
A D + L L ++ G ++ G + VA+K ++ P + E
Sbjct: 176 AKDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLK-PGNMSPEA-------- 226
Query: 229 FNREVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIA 288
F +E ++ +L + +++ A + P+Y ++TEY+S+GSL +L K L LP+L+
Sbjct: 227 FLQEAQVMKKLRHEKLVQLYAVVSEEPIY-IVTEYMSKGSLLDFLKGEMGKYLRLPQLVD 285
Query: 289 IALDIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIA--CEEVYCDALSDDPGT 346
+A IA GM Y+ +HRDL+ N+L+ + K+ADFG+ E+ A
Sbjct: 286 MAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLGRLIEDNEYTARQGAKFP 345
Query: 347 YRWMAPEMIKHKSYGRKVDVYSFGLILWEMVA-GTIPYEEMNPIQAAFAVVNKNLRPAIP 405
+W APE + + K DV+SFG++L E+ G +PY M + V + R P
Sbjct: 346 IKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVN-REVLDQVERGYRMPCP 404
Query: 406 GDCPPAMAALIEQCWSLQPDKRPEFWHIVKVLEQFETS 443
+CP ++ L+ QCW P++RP F ++ LE + TS
Sbjct: 405 PECPESLHDLMCQCWRKDPEERPTFEYLQAFLEDYFTS 442
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 131 bits (330), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 77/265 (29%), Positives = 129/265 (48%), Gaps = 26/265 (9%)
Query: 187 FAHGAHSRLYHGIYKDEPVAVKIIRIPDDDENETLAARLEKQFNREVALLSRLHNPNVIK 246
F RL ++ PVA+K +++ + + F E +++ + +PN+I
Sbjct: 35 FGEVCSGRLKLPGKRELPVAIKTLKV-------GYTEKQRRDFLGEASIMGQFDHPNIIH 87
Query: 247 FVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIALDIARGMEYIHSQGVI 306
K ++TEY+ GSL +L K + + + +L+ + I+ GM+Y+ G +
Sbjct: 88 LEGVVTKSKPVMIVTEYMENGSLDTFLKKNDGQ-FTVIQLVGMLRGISAGMKYLSDMGYV 146
Query: 307 HRDLKPENVLIDQEFHLKIADFGIACEEVYCDALSDDPGT----------YRWMAPEMIK 356
HRDL N+LI+ K++DFG++ L DDP RW APE I
Sbjct: 147 HRDLAARNILINSNLVCKVSDFGLS------RVLEDDPEAAYTTRGGKIPIRWTAPEAIA 200
Query: 357 HKSYGRKVDVYSFGLILWEMVA-GTIPYEEMNPIQAAFAVVNKNLRPAIPGDCPPAMAAL 415
+ + DV+S+G+++WE+V+ G PY EM Q V + R P DCP A+ L
Sbjct: 201 FRKFTSASDVWSYGIVMWEVVSYGERPYWEMTN-QDVIKAVEEGYRLPSPMDCPAALYQL 259
Query: 416 IEQCWSLQPDKRPEFWHIVKVLEQF 440
+ CW + + RP+F IV +L++
Sbjct: 260 MLDCWQKERNSRPKFDEIVNMLDKL 284
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 130 bits (328), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 92/303 (30%), Positives = 147/303 (48%), Gaps = 34/303 (11%)
Query: 179 SQLFLGLRFAHGAHSRLYH----GIYKDEP-----VAVKIIRIPDDDENETLAARLEKQF 229
+L LG GA ++ GI KD+P VAVK+++ DD E + L +
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLK---DDATEKDLSDLVSEM 91
Query: 230 NREVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYL--------------HK 275
E+ + H N+I + AC + VI EY S+G+LR YL ++
Sbjct: 92 --EMMKMIGKHK-NIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEXSYDINR 148
Query: 276 LEHKTLPLPKLIAIALDIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIACEEV 335
+ + + L++ +ARGMEY+ SQ IHRDL NVL+ + +KIADFG+A +
Sbjct: 149 VPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDIN 208
Query: 336 YCDALSDDPGT---YRWMAPEMIKHKSYGRKVDVYSFGLILWEMVA-GTIPYEEMNPIQA 391
D +WMAPE + + Y + DV+SFG+++WE+ G PY + P++
Sbjct: 209 NIDXXKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGI-PVEE 267
Query: 392 AFAVVNKNLRPAIPGDCPPAMAALIEQCWSLQPDKRPEFWHIVKVLEQFETSLACNGTLN 451
F ++ + R P +C + ++ CW P +RP F +V+ L++ T L+
Sbjct: 268 LFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILTLTTNEEYLD 327
Query: 452 LVQ 454
L Q
Sbjct: 328 LSQ 330
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 130 bits (328), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 83/278 (29%), Positives = 138/278 (49%), Gaps = 15/278 (5%)
Query: 170 AADEHTVDLSQLFLGLRFAHGAHSRLYHGIYKDEP-VAVKIIRIPDDDENETLAARLEKQ 228
A D + L L ++ G ++ G + VA+K ++ P E
Sbjct: 9 AKDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLK-PGTMSPEA-------- 59
Query: 229 FNREVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIA 288
F +E ++ +L + +++ A + P+Y ++TEY+S+GSL +L K L LP+L+
Sbjct: 60 FLQEAQVMKKLRHEKLVQLYAVVSEEPIY-IVTEYMSKGSLLDFLKGEMGKYLRLPQLVD 118
Query: 289 IALDIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIA--CEEVYCDALSDDPGT 346
+A IA GM Y+ +HRDL+ N+L+ + K+ADFG+A E+ A
Sbjct: 119 MAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFP 178
Query: 347 YRWMAPEMIKHKSYGRKVDVYSFGLILWEMVA-GTIPYEEMNPIQAAFAVVNKNLRPAIP 405
+W APE + + K DV+SFG++L E+ G +PY M + V + R P
Sbjct: 179 IKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVN-REVLDQVERGYRMPCP 237
Query: 406 GDCPPAMAALIEQCWSLQPDKRPEFWHIVKVLEQFETS 443
+CP ++ L+ QCW P++RP F ++ LE + TS
Sbjct: 238 PECPESLHDLMCQCWRKDPEERPTFEYLQAFLEDYFTS 275
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 130 bits (328), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 92/303 (30%), Positives = 147/303 (48%), Gaps = 34/303 (11%)
Query: 179 SQLFLGLRFAHGAHSRLYH----GIYKDEP-----VAVKIIRIPDDDENETLAARLEKQF 229
+L LG GA ++ GI KD+P VAVK+++ DD E + L +
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLK---DDATEKDLSDLVSEM 91
Query: 230 NREVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYL--------------HK 275
E+ + H N+I + AC + VI EY S+G+LR YL ++
Sbjct: 92 --EMMKMIGKHK-NIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINR 148
Query: 276 LEHKTLPLPKLIAIALDIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIACEEV 335
+ + + L++ +ARGMEY+ SQ IHRDL NVL+ + +KIADFG+A +
Sbjct: 149 VPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDIN 208
Query: 336 YCDALSDDPGT---YRWMAPEMIKHKSYGRKVDVYSFGLILWEMVA-GTIPYEEMNPIQA 391
D +WMAPE + + Y + DV+SFG+++WE+ G PY + P++
Sbjct: 209 NIDXXKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGI-PVEE 267
Query: 392 AFAVVNKNLRPAIPGDCPPAMAALIEQCWSLQPDKRPEFWHIVKVLEQFETSLACNGTLN 451
F ++ + R P +C + ++ CW P +RP F +V+ L++ T L+
Sbjct: 268 LFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILTLTTNEEYLD 327
Query: 452 LVQ 454
L Q
Sbjct: 328 LSQ 330
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 130 bits (328), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 82/278 (29%), Positives = 138/278 (49%), Gaps = 15/278 (5%)
Query: 170 AADEHTVDLSQLFLGLRFAHGAHSRLYHGIYKDEP-VAVKIIRIPDDDENETLAARLEKQ 228
A D + L L ++ G ++ G + VA+K ++ P E
Sbjct: 175 AKDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLK-PGTMSPEA-------- 225
Query: 229 FNREVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIA 288
F +E ++ +L + +++ A + P+Y ++ EY+S+GSL +L K L LP+L+
Sbjct: 226 FLQEAQVMKKLRHEKLVQLYAVVSEEPIY-IVGEYMSKGSLLDFLKGETGKYLRLPQLVD 284
Query: 289 IALDIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIA--CEEVYCDALSDDPGT 346
+A IA GM Y+ +HRDL+ N+L+ + K+ADFG+A E+ A
Sbjct: 285 MAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFP 344
Query: 347 YRWMAPEMIKHKSYGRKVDVYSFGLILWEMVA-GTIPYEEMNPIQAAFAVVNKNLRPAIP 405
+W APE + + K DV+SFG++L E+ G +PY M + V + R P
Sbjct: 345 IKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVN-REVLDQVERGYRMPCP 403
Query: 406 GDCPPAMAALIEQCWSLQPDKRPEFWHIVKVLEQFETS 443
+CP ++ L+ QCW +P++RP F ++ LE + TS
Sbjct: 404 PECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTS 441
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 130 bits (327), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 79/236 (33%), Positives = 120/236 (50%), Gaps = 17/236 (7%)
Query: 226 EKQFNREVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPK 285
++ F +EV ++ L +PNV+KF+ K ITEY+ G+LR + ++ + P +
Sbjct: 51 QRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFITEYIKGGTLRGIIKSMDSQ-YPWSQ 109
Query: 286 LIAIALDIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIA----CEEVYCDALS 341
++ A DIA GM Y+HS +IHRDL N L+ + ++ +ADFG+A E+ + L
Sbjct: 110 RVSFAKDIASGMAYLHSMNIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLR 169
Query: 342 DDP-----------GTYRWMAPEMIKHKSYGRKVDVYSFGLILWEMVAGTIPYEEMNPIQ 390
G WMAPEMI +SY KVDV+SFG++L E++ + P
Sbjct: 170 SLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRT 229
Query: 391 AAFAV-VNKNLRPAIPGDCPPAMAALIEQCWSLQPDKRPEFWHIVKVLEQFETSLA 445
F + V L P +CPP+ + +C L P+KRP F + LE LA
Sbjct: 230 MDFGLNVRGFLDRYCPPNCPPSFFPITVRCCDLDPEKRPSFVKLEHWLETLRMHLA 285
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 130 bits (326), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 81/278 (29%), Positives = 139/278 (50%), Gaps = 15/278 (5%)
Query: 170 AADEHTVDLSQLFLGLRFAHGAHSRLYHGIYKDEP-VAVKIIRIPDDDENETLAARLEKQ 228
A D + L L ++ G ++ G + VA+K ++ P E
Sbjct: 6 AKDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLK-PGTMSPEA-------- 56
Query: 229 FNREVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIA 288
F +E ++ +L + +++ A + P+Y ++TEY+++GSL +L K L LP+L+
Sbjct: 57 FLQEAQVMKKLRHEKLVQLYAVVSEEPIY-IVTEYMNKGSLLDFLKGETGKYLRLPQLVD 115
Query: 289 IALDIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIA--CEEVYCDALSDDPGT 346
++ IA GM Y+ +HRDL+ N+L+ + K+ADFG+A E+ A
Sbjct: 116 MSAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEWTARQGAKFP 175
Query: 347 YRWMAPEMIKHKSYGRKVDVYSFGLILWEMVA-GTIPYEEMNPIQAAFAVVNKNLRPAIP 405
+W APE + + K DV+SFG++L E+ G +PY M + V + R P
Sbjct: 176 IKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVN-REVLDQVERGYRMPCP 234
Query: 406 GDCPPAMAALIEQCWSLQPDKRPEFWHIVKVLEQFETS 443
+CP ++ L+ QCW +P++RP F ++ LE + TS
Sbjct: 235 PECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTS 272
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 129 bits (325), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 81/278 (29%), Positives = 139/278 (50%), Gaps = 15/278 (5%)
Query: 170 AADEHTVDLSQLFLGLRFAHGAHSRLYHGIYKDEP-VAVKIIRIPDDDENETLAARLEKQ 228
A D + L L ++ G ++ G + VA+K ++ P E
Sbjct: 6 AKDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLK-PGTMSPEA-------- 56
Query: 229 FNREVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIA 288
F +E ++ +L + +++ A + P+Y ++TEY+++GSL +L K L LP+L+
Sbjct: 57 FLQEAQVMKKLRHEKLVQLYAVVSEEPIY-IVTEYMNKGSLLDFLKGETGKYLRLPQLVD 115
Query: 289 IALDIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIA--CEEVYCDALSDDPGT 346
++ IA GM Y+ +HRDL+ N+L+ + K+ADFG+A E+ A
Sbjct: 116 MSAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFP 175
Query: 347 YRWMAPEMIKHKSYGRKVDVYSFGLILWEMVA-GTIPYEEMNPIQAAFAVVNKNLRPAIP 405
+W APE + + K DV+SFG++L E+ G +PY M + V + R P
Sbjct: 176 IKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVN-REVLDQVERGYRMPCP 234
Query: 406 GDCPPAMAALIEQCWSLQPDKRPEFWHIVKVLEQFETS 443
+CP ++ L+ QCW +P++RP F ++ LE + TS
Sbjct: 235 PECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTS 272
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 129 bits (325), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 82/278 (29%), Positives = 138/278 (49%), Gaps = 15/278 (5%)
Query: 170 AADEHTVDLSQLFLGLRFAHGAHSRLYHGIYKDEP-VAVKIIRIPDDDENETLAARLEKQ 228
A D + L L ++ G ++ G + VA+K ++ P E
Sbjct: 9 AKDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLK-PGTMSPEA-------- 59
Query: 229 FNREVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIA 288
F +E ++ ++ + +++ A + P+Y ++TEY+S+GSL +L K L LP+L+
Sbjct: 60 FLQEAQVMKKIRHEKLVQLYAVVSEEPIY-IVTEYMSKGSLLDFLKGEMGKYLRLPQLVD 118
Query: 289 IALDIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIA--CEEVYCDALSDDPGT 346
+A IA GM Y+ +HRDL+ N+L+ + K+ADFG+A E+ A
Sbjct: 119 MAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFP 178
Query: 347 YRWMAPEMIKHKSYGRKVDVYSFGLILWEMVA-GTIPYEEMNPIQAAFAVVNKNLRPAIP 405
+W APE + + K DV+SFG++L E+ G +PY M + V + R P
Sbjct: 179 IKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVN-REVLDQVERGYRMPCP 237
Query: 406 GDCPPAMAALIEQCWSLQPDKRPEFWHIVKVLEQFETS 443
+CP ++ L+ QCW P++RP F ++ LE + TS
Sbjct: 238 PECPESLHDLMCQCWRKDPEERPTFEYLQAFLEDYFTS 275
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 129 bits (325), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 89/291 (30%), Positives = 144/291 (49%), Gaps = 34/291 (11%)
Query: 179 SQLFLGLRFAHGAHSRLYH----GIYKDEP-----VAVKIIRIPDDDENETLAARLEKQF 229
+L LG GA ++ GI KD+P VAVK+++ DD E + L +
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLK---DDATEKDLSDLVSEM 91
Query: 230 NREVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYL--------------HK 275
E+ + H N+I + AC + VI EY S+G+LR YL ++
Sbjct: 92 --EMMKMIGKHK-NIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINR 148
Query: 276 LEHKTLPLPKLIAIALDIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIACEEV 335
+ + + L++ +ARGMEY+ SQ IHRDL NVL+ + +KIADFG+A +
Sbjct: 149 VPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDIN 208
Query: 336 YCDALSDDPGT---YRWMAPEMIKHKSYGRKVDVYSFGLILWEMVA-GTIPYEEMNPIQA 391
D + +WMAPE + + Y + DV+SFG+++WE+ G PY + P++
Sbjct: 209 NIDYYKNTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGI-PVEE 267
Query: 392 AFAVVNKNLRPAIPGDCPPAMAALIEQCWSLQPDKRPEFWHIVKVLEQFET 442
F ++ + R P +C + ++ CW P +RP F +V+ L++ T
Sbjct: 268 LFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILT 318
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 129 bits (325), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 88/292 (30%), Positives = 146/292 (50%), Gaps = 36/292 (12%)
Query: 179 SQLFLGLRFAHGAHSRLYH----GIYKDEP-----VAVKIIRIPDDDENETLAARLEKQF 229
+L LG GA ++ GI KD+P VAVK+++ DD E L+
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLK--DDATEEDLS-----DL 87
Query: 230 NREVALLSRL-HNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYL--------------H 274
E+ ++ + + N+I + AC + VI EY S+G+LR YL +
Sbjct: 88 VSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDIN 147
Query: 275 KLEHKTLPLPKLIAIALDIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIACEE 334
++ + + L++ +ARGMEY+ SQ IHRDL NVL+ + +KIADFG+A +
Sbjct: 148 RVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDI 207
Query: 335 V---YCDALSDDPGTYRWMAPEMIKHKSYGRKVDVYSFGLILWEMVA-GTIPYEEMNPIQ 390
Y ++ +WMAPE + + Y + DV+SFG+++WE+ G PY + P++
Sbjct: 208 NNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGI-PVE 266
Query: 391 AAFAVVNKNLRPAIPGDCPPAMAALIEQCWSLQPDKRPEFWHIVKVLEQFET 442
F ++ + R P +C + ++ CW P +RP F +V+ L++ T
Sbjct: 267 ELFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILT 318
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 129 bits (325), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 83/278 (29%), Positives = 137/278 (49%), Gaps = 15/278 (5%)
Query: 170 AADEHTVDLSQLFLGLRFAHGAHSRLYHGIYKDEP-VAVKIIRIPDDDENETLAARLEKQ 228
A D + L L ++ G ++ G + VA+K ++ P E
Sbjct: 9 AKDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLK-PGTMSPEA-------- 59
Query: 229 FNREVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIA 288
F +E ++ +L + +++ A + P+Y ++TEY+S+GSL +L K L LP+L+
Sbjct: 60 FLQEAQVMKKLRHEKLVQLYAVVSEEPIY-IVTEYMSKGSLLDFLKGEMGKYLRLPQLVD 118
Query: 289 IALDIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIA--CEEVYCDALSDDPGT 346
+A IA GM Y+ +HRDL N+L+ + K+ADFG+A E+ A
Sbjct: 119 MAAQIASGMAYVERMNYVHRDLAAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFP 178
Query: 347 YRWMAPEMIKHKSYGRKVDVYSFGLILWEMVA-GTIPYEEMNPIQAAFAVVNKNLRPAIP 405
+W APE + + K DV+SFG++L E+ G +PY M + V + R P
Sbjct: 179 IKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVN-REVLDQVERGYRMPCP 237
Query: 406 GDCPPAMAALIEQCWSLQPDKRPEFWHIVKVLEQFETS 443
+CP ++ L+ QCW P++RP F ++ LE + TS
Sbjct: 238 PECPESLHDLMCQCWRKDPEERPTFEYLQAFLEDYFTS 275
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 129 bits (325), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 84/278 (30%), Positives = 137/278 (49%), Gaps = 15/278 (5%)
Query: 170 AADEHTVDLSQLFLGLRFAHGAHSRLYHGIYKDEP-VAVKIIRIPDDDENETLAARLEKQ 228
A D + L L ++ G ++ G + VA+K ++ P E
Sbjct: 9 AKDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLK-PGTMSPEA-------- 59
Query: 229 FNREVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIA 288
F +E ++ +L + +++ A + P+Y VI EY+S+GSL +L K L LP+L+
Sbjct: 60 FLQEAQVMKKLRHEKLVQLYAVVSEEPIYIVI-EYMSKGSLLDFLKGEMGKYLRLPQLVD 118
Query: 289 IALDIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIA--CEEVYCDALSDDPGT 346
+A IA GM Y+ +HRDL+ N+L+ + K+ADFG+A E+ A
Sbjct: 119 MAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFP 178
Query: 347 YRWMAPEMIKHKSYGRKVDVYSFGLILWEMVA-GTIPYEEMNPIQAAFAVVNKNLRPAIP 405
+W APE + + K DV+SFG++L E+ G +PY M + V + R P
Sbjct: 179 IKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVN-REVLDQVERGYRMPCP 237
Query: 406 GDCPPAMAALIEQCWSLQPDKRPEFWHIVKVLEQFETS 443
+CP ++ L+ QCW P++RP F ++ LE + TS
Sbjct: 238 PECPESLHDLMCQCWRKDPEERPTFEYLQAFLEDYFTS 275
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 129 bits (325), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 85/263 (32%), Positives = 130/263 (49%), Gaps = 17/263 (6%)
Query: 186 RFAHGAHSRLYHGIYKDEP-VAVKIIRIPDDDENETLAARLEKQFNREVALLSRLHNPNV 244
R G ++ G Y VAVK ++ + LA E L+ +L + +
Sbjct: 16 RLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLA---------EANLMKQLQHQRL 66
Query: 245 IKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIALDIARGMEYIHSQG 304
++ A + P+Y +ITEY+ GSL +L L + KL+ +A IA GM +I +
Sbjct: 67 VRLYAVVTQEPIY-IITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN 125
Query: 305 VIHRDLKPENVLIDQEFHLKIADFGIA--CEEVYCDALSDDPGTYRWMAPEMIKHKSYGR 362
IHR+L+ N+L+ KIADFG+A E+ A +W APE I + ++
Sbjct: 126 YIHRNLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTI 185
Query: 363 KVDVYSFGLILWEMVA-GTIPYEEM-NPIQAAFAVVNKNLRPAIPGDCPPAMAALIEQCW 420
K DV+SFG++L E+V G IPY M NP + + R P +CP + L+ CW
Sbjct: 186 KSDVWSFGILLTEIVTHGRIPYPGMTNP--EVIQNLERGYRMVRPDNCPEELYQLMRLCW 243
Query: 421 SLQPDKRPEFWHIVKVLEQFETS 443
+P+ RP F ++ VLE F T+
Sbjct: 244 KERPEDRPTFDYLRSVLEDFFTA 266
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 129 bits (324), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 73/249 (29%), Positives = 120/249 (48%), Gaps = 26/249 (10%)
Query: 201 KDEPVAVKIIRIPDDDENETLAARLEKQFNREVALLSRLHNPNVIKFVAACKKPPVYCVI 260
+D PVA+K ++ R + F E +++ + +PN+I+ + + ++
Sbjct: 76 RDVPVAIKALK-------AGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIV 128
Query: 261 TEYLSEGSLRAYLHKLEHKTLPLPKLIAIALDIARGMEYIHSQGVIHRDLKPENVLIDQE 320
TEY+ GSL +L + + +L+ + + GM Y+ G +HRDL NVL+D
Sbjct: 129 TEYMENGSLDTFL-RTHDGQFTIMQLVGMLRGVGAGMRYLSDLGYVHRDLAARNVLVDSN 187
Query: 321 FHLKIADFGIACEEVYCDALSDDPGT----------YRWMAPEMIKHKSYGRKVDVYSFG 370
K++DFG++ L DDP RW APE I +++ DV+SFG
Sbjct: 188 LVCKVSDFGLS------RVLEDDPDAAXTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFG 241
Query: 371 LILWEMVA-GTIPYEEMNPIQAAFAVVNKNLRPAIPGDCPPAMAALIEQCWSLQPDKRPE 429
+++WE++A G PY M + + V + R P CP A+ L+ CW +RP
Sbjct: 242 VVMWEVLAYGERPYWNMTN-RDVISSVEEGYRLPAPMGCPHALHQLMLDCWHKDRAQRPR 300
Query: 430 FWHIVKVLE 438
F IV VL+
Sbjct: 301 FSQIVSVLD 309
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 129 bits (324), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 73/249 (29%), Positives = 120/249 (48%), Gaps = 26/249 (10%)
Query: 201 KDEPVAVKIIRIPDDDENETLAARLEKQFNREVALLSRLHNPNVIKFVAACKKPPVYCVI 260
+D PVA+K ++ R + F E +++ + +PN+I+ + + ++
Sbjct: 76 RDVPVAIKALK-------AGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIV 128
Query: 261 TEYLSEGSLRAYLHKLEHKTLPLPKLIAIALDIARGMEYIHSQGVIHRDLKPENVLIDQE 320
TEY+ GSL +L + + +L+ + + GM Y+ G +HRDL NVL+D
Sbjct: 129 TEYMENGSLDTFL-RTHDGQFTIMQLVGMLRGVGAGMRYLSDLGYVHRDLAARNVLVDSN 187
Query: 321 FHLKIADFGIACEEVYCDALSDDPGT----------YRWMAPEMIKHKSYGRKVDVYSFG 370
K++DFG++ L DDP RW APE I +++ DV+SFG
Sbjct: 188 LVCKVSDFGLS------RVLEDDPDAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFG 241
Query: 371 LILWEMVA-GTIPYEEMNPIQAAFAVVNKNLRPAIPGDCPPAMAALIEQCWSLQPDKRPE 429
+++WE++A G PY M + + V + R P CP A+ L+ CW +RP
Sbjct: 242 VVMWEVLAYGERPYWNMTN-RDVISSVEEGYRLPAPMGCPHALHQLMLDCWHKDRAQRPR 300
Query: 430 FWHIVKVLE 438
F IV VL+
Sbjct: 301 FSQIVSVLD 309
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 129 bits (324), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 82/276 (29%), Positives = 137/276 (49%), Gaps = 15/276 (5%)
Query: 172 DEHTVDLSQLFLGLRFAHGAHSRLYHGIYKDEP-VAVKIIRIPDDDENETLAARLEKQFN 230
D + L L ++ G ++ G + VA+K ++ P E F
Sbjct: 2 DAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLK-PGTMSPEA--------FL 52
Query: 231 REVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIA 290
+E ++ +L + +++ A + P+Y ++TEY+S+GSL +L K L LP+L+ +A
Sbjct: 53 QEAQVMKKLRHEKLVQLYAVVSEEPIY-IVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMA 111
Query: 291 LDIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIA--CEEVYCDALSDDPGTYR 348
IA GM Y+ +HRDL+ N+L+ + K+ADFG+A E+ A +
Sbjct: 112 AQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIK 171
Query: 349 WMAPEMIKHKSYGRKVDVYSFGLILWEMVA-GTIPYEEMNPIQAAFAVVNKNLRPAIPGD 407
W APE + + K DV+SFG++L E+ G +PY M + V + R P +
Sbjct: 172 WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVN-REVLDQVERGYRMPCPPE 230
Query: 408 CPPAMAALIEQCWSLQPDKRPEFWHIVKVLEQFETS 443
CP ++ L+ QCW P++RP F ++ LE + TS
Sbjct: 231 CPESLHDLMCQCWRKDPEERPTFEYLQAFLEDYFTS 266
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 129 bits (324), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 84/278 (30%), Positives = 137/278 (49%), Gaps = 15/278 (5%)
Query: 170 AADEHTVDLSQLFLGLRFAHGAHSRLYHGIYKDEP-VAVKIIRIPDDDENETLAARLEKQ 228
A D + L L ++ G ++ G + VA+K ++ P E
Sbjct: 9 AKDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLK-PGTMSPEA-------- 59
Query: 229 FNREVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIA 288
F +E ++ +L + +++ A + P+Y VI EY+S+GSL +L K L LP+L+
Sbjct: 60 FLQEAQVMKKLRHEKLVQLYAVVSEEPIYIVI-EYMSKGSLLDFLKGEMGKYLRLPQLVD 118
Query: 289 IALDIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIA--CEEVYCDALSDDPGT 346
+A IA GM Y+ +HRDL+ N+L+ + K+ADFG+A E+ A
Sbjct: 119 MAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFP 178
Query: 347 YRWMAPEMIKHKSYGRKVDVYSFGLILWEMVA-GTIPYEEMNPIQAAFAVVNKNLRPAIP 405
+W APE + + K DV+SFG++L E+ G +PY M + V + R P
Sbjct: 179 IKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVN-REVLDQVERGYRMPCP 237
Query: 406 GDCPPAMAALIEQCWSLQPDKRPEFWHIVKVLEQFETS 443
+CP ++ L+ QCW P++RP F ++ LE + TS
Sbjct: 238 PECPESLHDLMCQCWRKDPEERPTFEYLQAFLEDYFTS 275
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 129 bits (323), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 82/278 (29%), Positives = 137/278 (49%), Gaps = 15/278 (5%)
Query: 170 AADEHTVDLSQLFLGLRFAHGAHSRLYHGIYKDEP-VAVKIIRIPDDDENETLAARLEKQ 228
A D + L L ++ G ++ G + VA+K ++ P E
Sbjct: 9 AKDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLK-PGTMSPEA-------- 59
Query: 229 FNREVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIA 288
F +E ++ +L + +++ A + P+Y ++TEY+S+G L +L K L LP+L+
Sbjct: 60 FLQEAQVMKKLRHEKLVQLYAVVSEEPIY-IVTEYMSKGCLLDFLKGEMGKYLRLPQLVD 118
Query: 289 IALDIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIA--CEEVYCDALSDDPGT 346
+A IA GM Y+ +HRDL+ N+L+ + K+ADFG+A E+ A
Sbjct: 119 MAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFP 178
Query: 347 YRWMAPEMIKHKSYGRKVDVYSFGLILWEMVA-GTIPYEEMNPIQAAFAVVNKNLRPAIP 405
+W APE + + K DV+SFG++L E+ G +PY M + V + R P
Sbjct: 179 IKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVN-REVLDQVERGYRMPCP 237
Query: 406 GDCPPAMAALIEQCWSLQPDKRPEFWHIVKVLEQFETS 443
+CP ++ L+ QCW P++RP F ++ LE + TS
Sbjct: 238 PECPESLHDLMCQCWRKDPEERPTFEYLQAFLEDYFTS 275
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 129 bits (323), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 81/267 (30%), Positives = 135/267 (50%), Gaps = 15/267 (5%)
Query: 181 LFLGLRFAHGAHSRLYHGIYKDEP-VAVKIIRIPDDDENETLAARLEKQFNREVALLSRL 239
L L ++ G ++ G + VA+K ++ P E F +E ++ +L
Sbjct: 9 LRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLK-PGTMSPEA--------FLQEAQVMKKL 59
Query: 240 HNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIALDIARGMEY 299
+ +++ A + P+Y ++TEY+S+GSL +L K L LP+L+ +A IA GM Y
Sbjct: 60 RHEKLVQLYAVVSEEPIY-IVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAY 118
Query: 300 IHSQGVIHRDLKPENVLIDQEFHLKIADFGIA--CEEVYCDALSDDPGTYRWMAPEMIKH 357
+ +HRDL+ N+L+ + K+ADFG+A E+ A +W APE +
Sbjct: 119 VERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALY 178
Query: 358 KSYGRKVDVYSFGLILWEMVA-GTIPYEEMNPIQAAFAVVNKNLRPAIPGDCPPAMAALI 416
+ K DV+SFG++L E+ G +PY M + V + R P +CP ++ L+
Sbjct: 179 GRFTIKSDVWSFGILLTELTTKGRVPYPGMVN-REVLDQVERGYRMPCPPECPESLHDLM 237
Query: 417 EQCWSLQPDKRPEFWHIVKVLEQFETS 443
QCW P++RP F ++ LE + TS
Sbjct: 238 CQCWRKDPEERPTFEYLQAFLEDYFTS 264
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 128 bits (322), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 82/278 (29%), Positives = 137/278 (49%), Gaps = 15/278 (5%)
Query: 170 AADEHTVDLSQLFLGLRFAHGAHSRLYHGIYKDEP-VAVKIIRIPDDDENETLAARLEKQ 228
A D + L L ++ G ++ G + VA+K ++ P E
Sbjct: 9 AKDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLK-PGTMSPEA-------- 59
Query: 229 FNREVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIA 288
F +E ++ +L + +++ A + P+Y ++ EY+S+GSL +L K L LP+L+
Sbjct: 60 FLQEAQVMKKLRHEKLVQLYAVVSEEPIY-IVCEYMSKGSLLDFLKGEMGKYLRLPQLVD 118
Query: 289 IALDIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIA--CEEVYCDALSDDPGT 346
+A IA GM Y+ +HRDL+ N+L+ + K+ADFG+A E+ A
Sbjct: 119 MAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFP 178
Query: 347 YRWMAPEMIKHKSYGRKVDVYSFGLILWEMVA-GTIPYEEMNPIQAAFAVVNKNLRPAIP 405
+W APE + + K DV+SFG++L E+ G +PY M + V + R P
Sbjct: 179 IKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVN-REVLDQVERGYRMPCP 237
Query: 406 GDCPPAMAALIEQCWSLQPDKRPEFWHIVKVLEQFETS 443
+CP ++ L+ QCW P++RP F ++ LE + TS
Sbjct: 238 PECPESLHDLMCQCWRKDPEERPTFEYLQAFLEDYFTS 275
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 128 bits (322), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 89/291 (30%), Positives = 145/291 (49%), Gaps = 34/291 (11%)
Query: 179 SQLFLGLRFAHGAHSRLYH----GIYKDEP-----VAVKIIRIPDDDENETLAARLEKQF 229
+L LG GA ++ GI KD+P VAVK+++ DD E + L +
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLK---DDATEKDLSDLVSEM 91
Query: 230 NREVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYL--------------HK 275
E+ + H N+I + AC + VI EY S+G+LR YL ++
Sbjct: 92 --EMMKMIGKHK-NIITLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINR 148
Query: 276 LEHKTLPLPKLIAIALDIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIACEEV 335
+ + + L++ +ARGMEY+ SQ IHRDL NVL+ + +KIADFG+A +
Sbjct: 149 VPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDIN 208
Query: 336 ---YCDALSDDPGTYRWMAPEMIKHKSYGRKVDVYSFGLILWEMVA-GTIPYEEMNPIQA 391
Y ++ +WMAPE + + Y + DV+SFG+++WE+ G PY + P++
Sbjct: 209 NIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGI-PVEE 267
Query: 392 AFAVVNKNLRPAIPGDCPPAMAALIEQCWSLQPDKRPEFWHIVKVLEQFET 442
F ++ + R P +C + ++ CW P +RP F +V+ L++ T
Sbjct: 268 LFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILT 318
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 128 bits (321), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 89/291 (30%), Positives = 145/291 (49%), Gaps = 34/291 (11%)
Query: 179 SQLFLGLRFAHGAHSRLYH----GIYKDEP-----VAVKIIRIPDDDENETLAARLEKQF 229
+L LG GA ++ GI KD+P VAVK+++ DD E + L +
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLK---DDATEKDLSDLVSEM 91
Query: 230 NREVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYL--------------HK 275
E+ + H N+I + AC + VI EY S+G+LR YL ++
Sbjct: 92 --EMMKMIGKHK-NIIHLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINR 148
Query: 276 LEHKTLPLPKLIAIALDIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIACEEV 335
+ + + L++ +ARGMEY+ SQ IHRDL NVL+ + +KIADFG+A +
Sbjct: 149 VPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDIN 208
Query: 336 ---YCDALSDDPGTYRWMAPEMIKHKSYGRKVDVYSFGLILWEMVA-GTIPYEEMNPIQA 391
Y ++ +WMAPE + + Y + DV+SFG+++WE+ G PY + P++
Sbjct: 209 NIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGI-PVEE 267
Query: 392 AFAVVNKNLRPAIPGDCPPAMAALIEQCWSLQPDKRPEFWHIVKVLEQFET 442
F ++ + R P +C + ++ CW P +RP F +V+ L++ T
Sbjct: 268 LFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILT 318
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 127 bits (320), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 81/276 (29%), Positives = 137/276 (49%), Gaps = 15/276 (5%)
Query: 172 DEHTVDLSQLFLGLRFAHGAHSRLYHGIYKDEP-VAVKIIRIPDDDENETLAARLEKQFN 230
D + L L ++ G ++ G + VA+K ++ P E F
Sbjct: 1 DAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLK-PGTMSPEA--------FL 51
Query: 231 REVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIA 290
+E ++ +L + +++ A + P+ ++TEY+S+GSL +L K L LP+L+ +A
Sbjct: 52 QEAQVMKKLRHEKLVQLYAVVSEEPIX-IVTEYMSKGSLLDFLKGETGKYLRLPQLVDMA 110
Query: 291 LDIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIA--CEEVYCDALSDDPGTYR 348
IA GM Y+ +HRDL+ N+L+ + K+ADFG+A E+ A +
Sbjct: 111 AQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIK 170
Query: 349 WMAPEMIKHKSYGRKVDVYSFGLILWEMVA-GTIPYEEMNPIQAAFAVVNKNLRPAIPGD 407
W APE + + K DV+SFG++L E+ G +PY M + V + R P +
Sbjct: 171 WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVN-REVLDQVERGYRMPCPPE 229
Query: 408 CPPAMAALIEQCWSLQPDKRPEFWHIVKVLEQFETS 443
CP ++ L+ QCW +P++RP F ++ LE + TS
Sbjct: 230 CPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTS 265
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 127 bits (320), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 88/291 (30%), Positives = 145/291 (49%), Gaps = 34/291 (11%)
Query: 179 SQLFLGLRFAHGAHSRLYH----GIYKDEP-----VAVKIIRIPDDDENETLAARLEKQF 229
+L LG GA ++ GI KD+P VAVK+++ DD E + L +
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLK---DDATEKDLSDLVSEM 91
Query: 230 NREVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYL--------------HK 275
E+ + H N+I + AC + VI EY S+G+LR YL ++
Sbjct: 92 --EMMKMIGKHK-NIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINR 148
Query: 276 LEHKTLPLPKLIAIALDIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIACEEV 335
+ + + L++ +ARGMEY+ SQ IHRDL NVL+ + ++IADFG+A +
Sbjct: 149 VPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMRIADFGLARDIN 208
Query: 336 ---YCDALSDDPGTYRWMAPEMIKHKSYGRKVDVYSFGLILWEMVA-GTIPYEEMNPIQA 391
Y ++ +WMAPE + + Y + DV+SFG+++WE+ G PY + P++
Sbjct: 209 NIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGI-PVEE 267
Query: 392 AFAVVNKNLRPAIPGDCPPAMAALIEQCWSLQPDKRPEFWHIVKVLEQFET 442
F ++ + R P +C + ++ CW P +RP F +V+ L++ T
Sbjct: 268 LFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILT 318
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 127 bits (320), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 88/291 (30%), Positives = 144/291 (49%), Gaps = 34/291 (11%)
Query: 179 SQLFLGLRFAHGAHSRLYH----GIYKDEP-----VAVKIIRIPDDDENETLAARLEKQF 229
+L LG G ++ GI KD+P VAVK+++ DD E + L +
Sbjct: 81 DKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLK---DDATEKDLSDLVSEM 137
Query: 230 NREVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYL--------------HK 275
E+ + H N+I + AC + VI EY S+G+LR YL ++
Sbjct: 138 --EMMKMIGKHK-NIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINR 194
Query: 276 LEHKTLPLPKLIAIALDIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIACEEV 335
+ + + L++ +ARGMEY+ SQ IHRDL NVL+ + +KIADFG+A +
Sbjct: 195 VPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDIN 254
Query: 336 ---YCDALSDDPGTYRWMAPEMIKHKSYGRKVDVYSFGLILWEMVA-GTIPYEEMNPIQA 391
Y ++ +WMAPE + + Y + DV+SFG+++WE+ G PY + P++
Sbjct: 255 NIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGI-PVEE 313
Query: 392 AFAVVNKNLRPAIPGDCPPAMAALIEQCWSLQPDKRPEFWHIVKVLEQFET 442
F ++ + R P +C + ++ CW P +RP F +V+ L++ T
Sbjct: 314 LFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILT 364
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 127 bits (320), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 84/263 (31%), Positives = 134/263 (50%), Gaps = 16/263 (6%)
Query: 186 RFAHGAHSRLYHGIYKDEP-VAVKIIRIPDDDENETLAARLEKQFNREVALLSRLHNPNV 244
R G ++ G Y + VAVK ++ T++ + F E L+ L + +
Sbjct: 20 RLGAGQFGEVWMGYYNNSTKVAVKTLK------PGTMSV---QAFLEEANLMKTLQHDKL 70
Query: 245 IKFVAAC-KKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIALDIARGMEYIHSQ 303
++ A ++ P+Y +ITEY+++GSL +L E + LPKLI + IA GM YI +
Sbjct: 71 VRLYAVVTREEPIY-IITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERK 129
Query: 304 GVIHRDLKPENVLIDQEFHLKIADFGIA--CEEVYCDALSDDPGTYRWMAPEMIKHKSYG 361
IHRDL+ NVL+ + KIADFG+A E+ A +W APE I +
Sbjct: 130 NYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGCFT 189
Query: 362 RKVDVYSFGLILWEMVA-GTIPYEEMNPIQAAFAVVNKNLRPAIPGDCPPAMAALIEQCW 420
K DV+SFG++L+E+V G IPY A+ P + +CP + +++ CW
Sbjct: 190 IKSDVWSFGILLYEIVTYGKIPYPGRTNADVMTALSQGYRMPRVE-NCPDELYDIMKMCW 248
Query: 421 SLQPDKRPEFWHIVKVLEQFETS 443
+ ++RP F ++ VL+ F T+
Sbjct: 249 KEKAEERPTFDYLQSVLDDFYTA 271
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 127 bits (319), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 88/291 (30%), Positives = 144/291 (49%), Gaps = 34/291 (11%)
Query: 179 SQLFLGLRFAHGAHSRLYH----GIYKDEP-----VAVKIIRIPDDDENETLAARLEKQF 229
+L LG G ++ GI KD+P VAVK+++ DD E + L +
Sbjct: 22 DKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLK---DDATEKDLSDLVSEM 78
Query: 230 NREVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYL--------------HK 275
E+ + H N+I + AC + VI EY S+G+LR YL ++
Sbjct: 79 --EMMKMIGKHK-NIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINR 135
Query: 276 LEHKTLPLPKLIAIALDIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIACEEV 335
+ + + L++ +ARGMEY+ SQ IHRDL NVL+ + +KIADFG+A +
Sbjct: 136 VPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLTARNVLVTENNVMKIADFGLARDIN 195
Query: 336 ---YCDALSDDPGTYRWMAPEMIKHKSYGRKVDVYSFGLILWEMVA-GTIPYEEMNPIQA 391
Y ++ +WMAPE + + Y + DV+SFG+++WE+ G PY + P++
Sbjct: 196 NIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGI-PVEE 254
Query: 392 AFAVVNKNLRPAIPGDCPPAMAALIEQCWSLQPDKRPEFWHIVKVLEQFET 442
F ++ + R P +C + ++ CW P +RP F +V+ L++ T
Sbjct: 255 LFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILT 305
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 127 bits (318), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 88/291 (30%), Positives = 144/291 (49%), Gaps = 34/291 (11%)
Query: 179 SQLFLGLRFAHGAHSRLYH----GIYKDEP-----VAVKIIRIPDDDENETLAARLEKQF 229
+L LG G ++ GI KD+P VAVK+++ DD E + L +
Sbjct: 27 DKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLK---DDATEKDLSDLVSEM 83
Query: 230 NREVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYL--------------HK 275
E+ + H N+I + AC + VI EY S+G+LR YL ++
Sbjct: 84 --EMMKMIGKHK-NIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINR 140
Query: 276 LEHKTLPLPKLIAIALDIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIACEEV 335
+ + + L++ +ARGMEY+ SQ IHRDL NVL+ + +KIADFG+A +
Sbjct: 141 VPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDIN 200
Query: 336 ---YCDALSDDPGTYRWMAPEMIKHKSYGRKVDVYSFGLILWEMVA-GTIPYEEMNPIQA 391
Y ++ +WMAPE + + Y + DV+SFG+++WE+ G PY + P++
Sbjct: 201 NIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGI-PVEE 259
Query: 392 AFAVVNKNLRPAIPGDCPPAMAALIEQCWSLQPDKRPEFWHIVKVLEQFET 442
F ++ + R P +C + ++ CW P +RP F +V+ L++ T
Sbjct: 260 LFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILT 310
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 127 bits (318), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 88/291 (30%), Positives = 144/291 (49%), Gaps = 34/291 (11%)
Query: 179 SQLFLGLRFAHGAHSRLYH----GIYKDEP-----VAVKIIRIPDDDENETLAARLEKQF 229
+L LG G ++ GI KD+P VAVK+++ DD E + L +
Sbjct: 24 DKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLK---DDATEKDLSDLVSEM 80
Query: 230 NREVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYL--------------HK 275
E+ + H N+I + AC + VI EY S+G+LR YL ++
Sbjct: 81 --EMMKMIGKHK-NIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINR 137
Query: 276 LEHKTLPLPKLIAIALDIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIACEEV 335
+ + + L++ +ARGMEY+ SQ IHRDL NVL+ + +KIADFG+A +
Sbjct: 138 VPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDIN 197
Query: 336 ---YCDALSDDPGTYRWMAPEMIKHKSYGRKVDVYSFGLILWEMVA-GTIPYEEMNPIQA 391
Y ++ +WMAPE + + Y + DV+SFG+++WE+ G PY + P++
Sbjct: 198 NIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGI-PVEE 256
Query: 392 AFAVVNKNLRPAIPGDCPPAMAALIEQCWSLQPDKRPEFWHIVKVLEQFET 442
F ++ + R P +C + ++ CW P +RP F +V+ L++ T
Sbjct: 257 LFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILT 307
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 126 bits (317), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 81/278 (29%), Positives = 136/278 (48%), Gaps = 15/278 (5%)
Query: 170 AADEHTVDLSQLFLGLRFAHGAHSRLYHGIYKDEP-VAVKIIRIPDDDENETLAARLEKQ 228
A D + L L ++ G ++ G + VA+K ++ P E
Sbjct: 9 AKDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLK-PGTMSPEA-------- 59
Query: 229 FNREVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIA 288
F +E ++ +L + +++ A + P+Y ++ EY+S+G L +L K L LP+L+
Sbjct: 60 FLQEAQVMKKLRHEKLVQLYAVVSEEPIY-IVMEYMSKGCLLDFLKGEMGKYLRLPQLVD 118
Query: 289 IALDIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIA--CEEVYCDALSDDPGT 346
+A IA GM Y+ +HRDL+ N+L+ + K+ADFG+A E+ A
Sbjct: 119 MAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFP 178
Query: 347 YRWMAPEMIKHKSYGRKVDVYSFGLILWEMVA-GTIPYEEMNPIQAAFAVVNKNLRPAIP 405
+W APE + + K DV+SFG++L E+ G +PY M + V + R P
Sbjct: 179 IKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVN-REVLDQVERGYRMPCP 237
Query: 406 GDCPPAMAALIEQCWSLQPDKRPEFWHIVKVLEQFETS 443
+CP ++ L+ QCW P++RP F ++ LE + TS
Sbjct: 238 PECPESLHDLMCQCWRKDPEERPTFEYLQAFLEDYFTS 275
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 126 bits (317), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 88/291 (30%), Positives = 144/291 (49%), Gaps = 34/291 (11%)
Query: 179 SQLFLGLRFAHGAHSRLYH----GIYKDEP-----VAVKIIRIPDDDENETLAARLEKQF 229
+L LG GA ++ GI KD+P VAVK+++ DD E + L +
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLK---DDATEKDLSDLVSEM 91
Query: 230 NREVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYL--------------HK 275
E+ + H N+I + AC + VI Y S+G+LR YL ++
Sbjct: 92 --EMMKMIGKHK-NIINLLGACTQDGPLYVIVAYASKGNLREYLRARRPPGMEYSYDINR 148
Query: 276 LEHKTLPLPKLIAIALDIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIACEEV 335
+ + + L++ +ARGMEY+ SQ IHRDL NVL+ + +KIADFG+A +
Sbjct: 149 VPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDIN 208
Query: 336 ---YCDALSDDPGTYRWMAPEMIKHKSYGRKVDVYSFGLILWEMVA-GTIPYEEMNPIQA 391
Y ++ +WMAPE + + Y + DV+SFG+++WE+ G PY + P++
Sbjct: 209 NIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGI-PVEE 267
Query: 392 AFAVVNKNLRPAIPGDCPPAMAALIEQCWSLQPDKRPEFWHIVKVLEQFET 442
F ++ + R P +C + ++ CW P +RP F +V+ L++ T
Sbjct: 268 LFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILT 318
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 126 bits (316), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 88/291 (30%), Positives = 144/291 (49%), Gaps = 34/291 (11%)
Query: 179 SQLFLGLRFAHGAHSRLYH----GIYKDEP-----VAVKIIRIPDDDENETLAARLEKQF 229
+L LG GA ++ GI KD+P VAVK+++ DD E + L +
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLK---DDATEKDLSDLVSEM 91
Query: 230 NREVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYL--------------HK 275
E+ + H N+I + AC + VI Y S+G+LR YL ++
Sbjct: 92 --EMMKMIGKHK-NIINLLGACTQDGPLYVIVGYASKGNLREYLRARRPPGMEYSYDINR 148
Query: 276 LEHKTLPLPKLIAIALDIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIACEEV 335
+ + + L++ +ARGMEY+ SQ IHRDL NVL+ + +KIADFG+A +
Sbjct: 149 VPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDIN 208
Query: 336 ---YCDALSDDPGTYRWMAPEMIKHKSYGRKVDVYSFGLILWEMVA-GTIPYEEMNPIQA 391
Y ++ +WMAPE + + Y + DV+SFG+++WE+ G PY + P++
Sbjct: 209 NIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGI-PVEE 267
Query: 392 AFAVVNKNLRPAIPGDCPPAMAALIEQCWSLQPDKRPEFWHIVKVLEQFET 442
F ++ + R P +C + ++ CW P +RP F +V+ L++ T
Sbjct: 268 LFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILT 318
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 125 bits (315), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 81/288 (28%), Positives = 138/288 (47%), Gaps = 29/288 (10%)
Query: 172 DEHTVDLSQLFLGLRFAHGAHSRLYHGI----YKDEP---VAVKIIRIPDDDENETLAAR 224
DE V ++ + G+ +Y G+ KDEP VA+K + NE + R
Sbjct: 5 DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTV-------NEAASMR 57
Query: 225 LEKQFNREVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKL--EHKTLP 282
+F E +++ + +V++ + + VI E ++ G L++YL L E + P
Sbjct: 58 ERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNP 117
Query: 283 ------LPKLIAIALDIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIACEEVY 336
L K+I +A +IA GM Y+++ +HRDL N ++ ++F +KI DFG+ ++Y
Sbjct: 118 VLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMT-RDIY 176
Query: 337 CDALSDDPGT----YRWMAPEMIKHKSYGRKVDVYSFGLILWEMVA-GTIPYEEMNPIQA 391
G RWM+PE +K + DV+SFG++LWE+ PY+ ++ Q
Sbjct: 177 ETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQV 236
Query: 392 AFAVVNKNLRPAIPGDCPPAMAALIEQCWSLQPDKRPEFWHIVKVLEQ 439
V+ L P +CP + L+ CW P RP F I+ +++
Sbjct: 237 LRFVMEGGLLDK-PDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKE 283
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 125 bits (315), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 80/287 (27%), Positives = 136/287 (47%), Gaps = 27/287 (9%)
Query: 172 DEHTVDLSQLFLGLRFAHGAHSRLYHGI----YKDEP---VAVKIIRIPDDDENETLAAR 224
DE V ++ + G+ +Y G+ KDEP VA+K + NE + R
Sbjct: 3 DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTV-------NEAASMR 55
Query: 225 LEKQFNREVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKL--EHKTLP 282
+F E +++ + +V++ + + VI E ++ G L++YL L E + P
Sbjct: 56 ERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNP 115
Query: 283 ------LPKLIAIALDIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIACEEVY 336
L K+I +A +IA GM Y+++ +HRDL N ++ ++F +KI DFG+ +
Sbjct: 116 VLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXE 175
Query: 337 CDALSDDPGTY---RWMAPEMIKHKSYGRKVDVYSFGLILWEMVA-GTIPYEEMNPIQAA 392
D RWM+PE +K + DV+SFG++LWE+ PY+ ++ Q
Sbjct: 176 TDXXRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVL 235
Query: 393 FAVVNKNLRPAIPGDCPPAMAALIEQCWSLQPDKRPEFWHIVKVLEQ 439
V+ L P +CP + L+ CW P RP F I+ +++
Sbjct: 236 RFVMEGGLLDK-PDNCPDMLLELMRMCWQYNPKMRPSFLEIISSIKE 281
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 125 bits (315), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 83/299 (27%), Positives = 140/299 (46%), Gaps = 29/299 (9%)
Query: 161 GGVRVNAVDAADEHTVDLSQLFLGLRFAHGAHSRLYHGI----YKDEP---VAVKIIRIP 213
G V DE V ++ + G+ +Y G+ KDEP VA+K +
Sbjct: 1 GSFSAADVYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTV--- 57
Query: 214 DDDENETLAARLEKQFNREVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYL 273
NE + R +F E +++ + +V++ + + VI E ++ G L++YL
Sbjct: 58 ----NEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYL 113
Query: 274 HKL--EHKTLP------LPKLIAIALDIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKI 325
L E + P L K+I +A +IA GM Y+++ +HRDL N ++ ++F +KI
Sbjct: 114 RSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKI 173
Query: 326 ADFGIACEEVYCDALSDDPGT----YRWMAPEMIKHKSYGRKVDVYSFGLILWEMVA-GT 380
DFG+ ++Y G RWM+PE +K + DV+SFG++LWE+
Sbjct: 174 GDFGMT-RDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAE 232
Query: 381 IPYEEMNPIQAAFAVVNKNLRPAIPGDCPPAMAALIEQCWSLQPDKRPEFWHIVKVLEQ 439
PY+ ++ Q V+ L P +CP + L+ CW P RP F I+ +++
Sbjct: 233 QPYQGLSNEQVLRFVMEGGLLDK-PDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKE 290
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 125 bits (315), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 87/288 (30%), Positives = 141/288 (48%), Gaps = 34/288 (11%)
Query: 180 QLFLGLRFAHGAHSRLYH----GIYKDEP-----VAVKIIRIPDDDENETLAARLEKQFN 230
+L LG GA ++ G+ KD+P VAVK+++ D E + E +
Sbjct: 29 RLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLK-SDATEKDLSDLISEMEMM 87
Query: 231 REVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLE------------- 277
+ + + N+I + AC + VI EY S+G+LR YL E
Sbjct: 88 KMIG-----KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQAREPPGLEYSYNPSHN 142
Query: 278 -HKTLPLPKLIAIALDIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIACEEVY 336
+ L L++ A +ARGMEY+ S+ IHRDL NVL+ ++ +KIADFG+A + +
Sbjct: 143 PEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHH 202
Query: 337 CDALSDDPGT---YRWMAPEMIKHKSYGRKVDVYSFGLILWEMVA-GTIPYEEMNPIQAA 392
D +WMAPE + + Y + DV+SFG++LWE+ G PY + P++
Sbjct: 203 IDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGV-PVEEL 261
Query: 393 FAVVNKNLRPAIPGDCPPAMAALIEQCWSLQPDKRPEFWHIVKVLEQF 440
F ++ + R P +C + ++ CW P +RP F +V+ L++
Sbjct: 262 FKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 309
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 125 bits (315), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 67/225 (29%), Positives = 115/225 (51%), Gaps = 19/225 (8%)
Query: 227 KQFNREVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKL 286
+ F E +++ + +PN+I K +ITEY+ GSL A+L K + + + +L
Sbjct: 75 RDFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGR-FTVIQL 133
Query: 287 IAIALDIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIACEEVYCDALSDDPGT 346
+ + I GM+Y+ +HRDL N+L++ K++DFG++ L DDP
Sbjct: 134 VGMLRGIGSGMKYLSDMSAVHRDLAARNILVNSNLVCKVSDFGMS------RVLEDDPEA 187
Query: 347 ----------YRWMAPEMIKHKSYGRKVDVYSFGLILWEMVA-GTIPYEEMNPIQAAFAV 395
RW APE I ++ + DV+S+G+++WE+++ G PY +M+ Q
Sbjct: 188 AYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSN-QDVIKA 246
Query: 396 VNKNLRPAIPGDCPPAMAALIEQCWSLQPDKRPEFWHIVKVLEQF 440
+ + R P DCP A+ L+ CW + RP+F IV +L++
Sbjct: 247 IEEGYRLPPPMDCPIALHQLMLDCWQKERSDRPKFGQIVNMLDKL 291
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 125 bits (315), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 81/288 (28%), Positives = 138/288 (47%), Gaps = 29/288 (10%)
Query: 172 DEHTVDLSQLFLGLRFAHGAHSRLYHGI----YKDEP---VAVKIIRIPDDDENETLAAR 224
DE V ++ + G+ +Y G+ KDEP VA+K + NE + R
Sbjct: 9 DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTV-------NEAASMR 61
Query: 225 LEKQFNREVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKL--EHKTLP 282
+F E +++ + +V++ + + VI E ++ G L++YL L E + P
Sbjct: 62 ERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNP 121
Query: 283 ------LPKLIAIALDIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIACEEVY 336
L K+I +A +IA GM Y+++ +HRDL N ++ ++F +KI DFG+ ++Y
Sbjct: 122 VLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMT-RDIY 180
Query: 337 CDALSDDPGT----YRWMAPEMIKHKSYGRKVDVYSFGLILWEMVA-GTIPYEEMNPIQA 391
G RWM+PE +K + DV+SFG++LWE+ PY+ ++ Q
Sbjct: 181 ETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQV 240
Query: 392 AFAVVNKNLRPAIPGDCPPAMAALIEQCWSLQPDKRPEFWHIVKVLEQ 439
V+ L P +CP + L+ CW P RP F I+ +++
Sbjct: 241 LRFVMEGGLLDK-PDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKE 287
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 125 bits (315), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 80/287 (27%), Positives = 136/287 (47%), Gaps = 27/287 (9%)
Query: 172 DEHTVDLSQLFLGLRFAHGAHSRLYHGI----YKDEP---VAVKIIRIPDDDENETLAAR 224
DE V ++ + G+ +Y G+ KDEP VA+K + NE + R
Sbjct: 12 DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTV-------NEAASMR 64
Query: 225 LEKQFNREVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKL--EHKTLP 282
+F E +++ + +V++ + + VI E ++ G L++YL L E + P
Sbjct: 65 ERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNP 124
Query: 283 ------LPKLIAIALDIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIACEEVY 336
L K+I +A +IA GM Y+++ +HRDL N ++ ++F +KI DFG+ +
Sbjct: 125 VLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXE 184
Query: 337 CDALSDDPGTY---RWMAPEMIKHKSYGRKVDVYSFGLILWEMVA-GTIPYEEMNPIQAA 392
D RWM+PE +K + DV+SFG++LWE+ PY+ ++ Q
Sbjct: 185 TDXXRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVL 244
Query: 393 FAVVNKNLRPAIPGDCPPAMAALIEQCWSLQPDKRPEFWHIVKVLEQ 439
V+ L P +CP + L+ CW P RP F I+ +++
Sbjct: 245 RFVMEGGLLDK-PDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKE 290
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 125 bits (315), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 84/297 (28%), Positives = 142/297 (47%), Gaps = 31/297 (10%)
Query: 165 VNAVDA--ADEHTVDLSQLFLGLRFAHGAHSRLYHGI----YKDEP---VAVKIIRIPDD 215
V+A D DE V ++ + G+ +Y G+ KDEP VA+K +
Sbjct: 2 VSAADVYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTV----- 56
Query: 216 DENETLAARLEKQFNREVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHK 275
NE + R +F E +++ + +V++ + + VI E ++ G L++YL
Sbjct: 57 --NEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRS 114
Query: 276 L--EHKTLP------LPKLIAIALDIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIAD 327
L E + P L K+I +A +IA GM Y+++ +HRDL N ++ ++F +KI D
Sbjct: 115 LRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGD 174
Query: 328 FGIACEEVYCDALSDDPGT----YRWMAPEMIKHKSYGRKVDVYSFGLILWEMVA-GTIP 382
FG+ ++Y G RWM+PE +K + DV+SFG++LWE+ P
Sbjct: 175 FGMT-RDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQP 233
Query: 383 YEEMNPIQAAFAVVNKNLRPAIPGDCPPAMAALIEQCWSLQPDKRPEFWHIVKVLEQ 439
Y+ ++ Q V+ L P +CP + L+ CW P RP F I+ +++
Sbjct: 234 YQGLSNEQVLRFVMEGGLLDK-PDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKE 289
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 125 bits (314), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 85/304 (27%), Positives = 143/304 (47%), Gaps = 34/304 (11%)
Query: 156 KYFDHGGVRVNAVDAADEHTVDLSQLFLGLRFAHGAHSRLYHGI----YKDEP---VAVK 208
+YF V V DE V ++ + G+ +Y G+ KDEP VA+K
Sbjct: 29 EYFSAADVYV-----PDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIK 83
Query: 209 IIRIPDDDENETLAARLEKQFNREVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGS 268
+ NE + R +F E +++ + +V++ + + VI E ++ G
Sbjct: 84 TV-------NEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGD 136
Query: 269 LRAYLHKL--EHKTLP------LPKLIAIALDIARGMEYIHSQGVIHRDLKPENVLIDQE 320
L++YL L E + P L K+I +A +IA GM Y+++ +HRDL N ++ ++
Sbjct: 137 LKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAED 196
Query: 321 FHLKIADFGIACEEVYCDALSDDPGT----YRWMAPEMIKHKSYGRKVDVYSFGLILWEM 376
F +KI DFG+ ++Y G RWM+PE +K + DV+SFG++LWE+
Sbjct: 197 FTVKIGDFGMT-RDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI 255
Query: 377 VA-GTIPYEEMNPIQAAFAVVNKNLRPAIPGDCPPAMAALIEQCWSLQPDKRPEFWHIVK 435
PY+ ++ Q V+ L P +CP + L+ CW P RP F I+
Sbjct: 256 ATLAEQPYQGLSNEQVLRFVMEGGLLDK-PDNCPDMLFELMRMCWQYNPKMRPSFLEIIS 314
Query: 436 VLEQ 439
+++
Sbjct: 315 SIKE 318
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 125 bits (314), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 84/297 (28%), Positives = 142/297 (47%), Gaps = 31/297 (10%)
Query: 165 VNAVDA--ADEHTVDLSQLFLGLRFAHGAHSRLYHGI----YKDEP---VAVKIIRIPDD 215
V+A D DE V ++ + G+ +Y G+ KDEP VA+K +
Sbjct: 2 VSAADVYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTV----- 56
Query: 216 DENETLAARLEKQFNREVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHK 275
NE + R +F E +++ + +V++ + + VI E ++ G L++YL
Sbjct: 57 --NEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRS 114
Query: 276 L--EHKTLP------LPKLIAIALDIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIAD 327
L E + P L K+I +A +IA GM Y+++ +HRDL N ++ ++F +KI D
Sbjct: 115 LRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGD 174
Query: 328 FGIACEEVYCDALSDDPGT----YRWMAPEMIKHKSYGRKVDVYSFGLILWEMVA-GTIP 382
FG+ ++Y G RWM+PE +K + DV+SFG++LWE+ P
Sbjct: 175 FGMT-RDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQP 233
Query: 383 YEEMNPIQAAFAVVNKNLRPAIPGDCPPAMAALIEQCWSLQPDKRPEFWHIVKVLEQ 439
Y+ ++ Q V+ L P +CP + L+ CW P RP F I+ +++
Sbjct: 234 YQGLSNEQVLRFVMEGGLLDK-PDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKE 289
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 125 bits (314), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 85/304 (27%), Positives = 143/304 (47%), Gaps = 34/304 (11%)
Query: 156 KYFDHGGVRVNAVDAADEHTVDLSQLFLGLRFAHGAHSRLYHGI----YKDEP---VAVK 208
+YF V V DE V ++ + G+ +Y G+ KDEP VA+K
Sbjct: 7 EYFSAADVYV-----PDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIK 61
Query: 209 IIRIPDDDENETLAARLEKQFNREVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGS 268
+ NE + R +F E +++ + +V++ + + VI E ++ G
Sbjct: 62 TV-------NEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGD 114
Query: 269 LRAYLHKL--EHKTLP------LPKLIAIALDIARGMEYIHSQGVIHRDLKPENVLIDQE 320
L++YL L E + P L K+I +A +IA GM Y+++ +HRDL N ++ ++
Sbjct: 115 LKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAED 174
Query: 321 FHLKIADFGIACEEVYCDALSDDPGT----YRWMAPEMIKHKSYGRKVDVYSFGLILWEM 376
F +KI DFG+ ++Y G RWM+PE +K + DV+SFG++LWE+
Sbjct: 175 FTVKIGDFGMT-RDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI 233
Query: 377 VA-GTIPYEEMNPIQAAFAVVNKNLRPAIPGDCPPAMAALIEQCWSLQPDKRPEFWHIVK 435
PY+ ++ Q V+ L P +CP + L+ CW P RP F I+
Sbjct: 234 ATLAEQPYQGLSNEQVLRFVMEGGLLDK-PDNCPDMLFELMRMCWQYNPKMRPSFLEIIS 292
Query: 436 VLEQ 439
+++
Sbjct: 293 SIKE 296
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 125 bits (314), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 67/225 (29%), Positives = 115/225 (51%), Gaps = 19/225 (8%)
Query: 227 KQFNREVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKL 286
+ F E +++ + +PN+I K +ITEY+ GSL A+L K + + + +L
Sbjct: 60 RDFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGR-FTVIQL 118
Query: 287 IAIALDIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIACEEVYCDALSDDPGT 346
+ + I GM+Y+ +HRDL N+L++ K++DFG++ L DDP
Sbjct: 119 VGMLRGIGSGMKYLSDMSYVHRDLAARNILVNSNLVCKVSDFGMS------RVLEDDPEA 172
Query: 347 ----------YRWMAPEMIKHKSYGRKVDVYSFGLILWEMVA-GTIPYEEMNPIQAAFAV 395
RW APE I ++ + DV+S+G+++WE+++ G PY +M+ Q
Sbjct: 173 AYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSN-QDVIKA 231
Query: 396 VNKNLRPAIPGDCPPAMAALIEQCWSLQPDKRPEFWHIVKVLEQF 440
+ + R P DCP A+ L+ CW + RP+F IV +L++
Sbjct: 232 IEEGYRLPPPMDCPIALHQLMLDCWQKERSDRPKFGQIVNMLDKL 276
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 125 bits (314), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 67/225 (29%), Positives = 115/225 (51%), Gaps = 19/225 (8%)
Query: 227 KQFNREVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKL 286
+ F E +++ + +PN+I K +ITEY+ GSL A+L K + + + +L
Sbjct: 54 RDFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGR-FTVIQL 112
Query: 287 IAIALDIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIACEEVYCDALSDDPGT 346
+ + I GM+Y+ +HRDL N+L++ K++DFG++ L DDP
Sbjct: 113 VGMLRGIGSGMKYLSDMSYVHRDLAARNILVNSNLVCKVSDFGMS------RVLEDDPEA 166
Query: 347 ----------YRWMAPEMIKHKSYGRKVDVYSFGLILWEMVA-GTIPYEEMNPIQAAFAV 395
RW APE I ++ + DV+S+G+++WE+++ G PY +M+ Q
Sbjct: 167 AYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSN-QDVIKA 225
Query: 396 VNKNLRPAIPGDCPPAMAALIEQCWSLQPDKRPEFWHIVKVLEQF 440
+ + R P DCP A+ L+ CW + RP+F IV +L++
Sbjct: 226 IEEGYRLPPPMDCPIALHQLMLDCWQKERSDRPKFGQIVNMLDKL 270
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 125 bits (313), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 88/288 (30%), Positives = 143/288 (49%), Gaps = 34/288 (11%)
Query: 180 QLFLGLRFAHGAHSRLYH----GIYKDEP-----VAVKIIRIPDDDENETLAARLEKQFN 230
+L LG GA ++ G+ KD+P VAVK+++ D E + E +
Sbjct: 18 RLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLK-SDATEKDLSDLISEMEMM 76
Query: 231 REVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHK-----LEH------- 278
+ + + N+I + AC + VI EY S+G+LR YL LE+
Sbjct: 77 KMIG-----KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHN 131
Query: 279 --KTLPLPKLIAIALDIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIACEEVY 336
+ L L++ A +ARGMEY+ S+ IHRDL NVL+ ++ +KIADFG+A + +
Sbjct: 132 PEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHH 191
Query: 337 CDALSDDPGT---YRWMAPEMIKHKSYGRKVDVYSFGLILWEMVA-GTIPYEEMNPIQAA 392
D +WMAPE + + Y + DV+SFG++LWE+ G PY + P++
Sbjct: 192 IDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGV-PVEEL 250
Query: 393 FAVVNKNLRPAIPGDCPPAMAALIEQCWSLQPDKRPEFWHIVKVLEQF 440
F ++ + R P +C + ++ CW P +RP F +V+ L++
Sbjct: 251 FKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 298
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 125 bits (313), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 88/288 (30%), Positives = 143/288 (49%), Gaps = 34/288 (11%)
Query: 180 QLFLGLRFAHGAHSRLYH----GIYKDEP-----VAVKIIRIPDDDENETLAARLEKQFN 230
+L LG GA ++ G+ KD+P VAVK+++ D E + E +
Sbjct: 70 RLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLK-SDATEKDLSDLISEMEMM 128
Query: 231 REVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHK-----LEH------- 278
+ + + N+I + AC + VI EY S+G+LR YL LE+
Sbjct: 129 KMIG-----KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHN 183
Query: 279 --KTLPLPKLIAIALDIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIACEEVY 336
+ L L++ A +ARGMEY+ S+ IHRDL NVL+ ++ +KIADFG+A + +
Sbjct: 184 PEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHH 243
Query: 337 CDALSDDPGT---YRWMAPEMIKHKSYGRKVDVYSFGLILWEMVA-GTIPYEEMNPIQAA 392
D +WMAPE + + Y + DV+SFG++LWE+ G PY + P++
Sbjct: 244 IDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGV-PVEEL 302
Query: 393 FAVVNKNLRPAIPGDCPPAMAALIEQCWSLQPDKRPEFWHIVKVLEQF 440
F ++ + R P +C + ++ CW P +RP F +V+ L++
Sbjct: 303 FKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 350
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 125 bits (313), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 88/288 (30%), Positives = 143/288 (49%), Gaps = 34/288 (11%)
Query: 180 QLFLGLRFAHGAHSRLYH----GIYKDEP-----VAVKIIRIPDDDENETLAARLEKQFN 230
+L LG GA ++ G+ KD+P VAVK+++ D E + E +
Sbjct: 29 RLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLK-SDATEKDLSDLISEMEMM 87
Query: 231 REVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHK-----LEH------- 278
+ + + N+I + AC + VI EY S+G+LR YL LE+
Sbjct: 88 KMIG-----KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHN 142
Query: 279 --KTLPLPKLIAIALDIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIACEEVY 336
+ L L++ A +ARGMEY+ S+ IHRDL NVL+ ++ +KIADFG+A + +
Sbjct: 143 PEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHH 202
Query: 337 CDALSDDPGT---YRWMAPEMIKHKSYGRKVDVYSFGLILWEMVA-GTIPYEEMNPIQAA 392
D +WMAPE + + Y + DV+SFG++LWE+ G PY + P++
Sbjct: 203 IDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGV-PVEEL 261
Query: 393 FAVVNKNLRPAIPGDCPPAMAALIEQCWSLQPDKRPEFWHIVKVLEQF 440
F ++ + R P +C + ++ CW P +RP F +V+ L++
Sbjct: 262 FKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 309
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 124 bits (312), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 90/300 (30%), Positives = 146/300 (48%), Gaps = 34/300 (11%)
Query: 180 QLFLGLRFAHGAHSRLYH----GIYKDEP-----VAVKIIRIPDDDENETLAARLEKQFN 230
+L LG GA ++ G+ KD+P VAVK+++ D E + E +
Sbjct: 29 RLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLK-SDATEKDLSDLISEMEMM 87
Query: 231 REVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHK-----LE-------- 277
+ + + N+I + AC + VI EY S+G+LR YL LE
Sbjct: 88 KMIG-----KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEFSFNPSHN 142
Query: 278 -HKTLPLPKLIAIALDIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIACEEVY 336
+ L L++ A +ARGMEY+ S+ IHRDL NVL+ ++ +KIADFG+A + +
Sbjct: 143 PEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHH 202
Query: 337 CDALSDDPGT---YRWMAPEMIKHKSYGRKVDVYSFGLILWEMVA-GTIPYEEMNPIQAA 392
D +WMAPE + + Y + DV+SFG++LWE+ G PY + P++
Sbjct: 203 IDXXKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGV-PVEEL 261
Query: 393 FAVVNKNLRPAIPGDCPPAMAALIEQCWSLQPDKRPEFWHIVKVLEQFETSLACNGTLNL 452
F ++ + R P +C + ++ CW P +RP F +V+ L++ + L+L
Sbjct: 262 FKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVALTSNQEXLDL 321
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 124 bits (312), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 88/289 (30%), Positives = 143/289 (49%), Gaps = 34/289 (11%)
Query: 179 SQLFLGLRFAHGAHSRLYH----GIYKDEP-----VAVKIIRIPDDDENETLAARLEKQF 229
+L LG GA ++ G+ KD+P VAVK+++ D E + E +
Sbjct: 13 DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLK-SDATEKDLSDLISEMEM 71
Query: 230 NREVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHK-----LEH------ 278
+ + + N+I + AC + VI EY S+G+LR YL LE+
Sbjct: 72 MKMIG-----KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSH 126
Query: 279 ---KTLPLPKLIAIALDIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIACEEV 335
+ L L++ A +ARGMEY+ S+ IHRDL NVL+ ++ +KIADFG+A +
Sbjct: 127 NPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIH 186
Query: 336 YCDALSDDPGT---YRWMAPEMIKHKSYGRKVDVYSFGLILWEMVA-GTIPYEEMNPIQA 391
+ D +WMAPE + + Y + DV+SFG++LWE+ G PY + P++
Sbjct: 187 HIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGV-PVEE 245
Query: 392 AFAVVNKNLRPAIPGDCPPAMAALIEQCWSLQPDKRPEFWHIVKVLEQF 440
F ++ + R P +C + ++ CW P +RP F +V+ L++
Sbjct: 246 LFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 294
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 124 bits (312), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 88/288 (30%), Positives = 143/288 (49%), Gaps = 34/288 (11%)
Query: 180 QLFLGLRFAHGAHSRLYH----GIYKDEP-----VAVKIIRIPDDDENETLAARLEKQFN 230
+L LG GA ++ G+ KD+P VAVK+++ D E + E +
Sbjct: 22 RLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLK-SDATEKDLSDLISEMEMM 80
Query: 231 REVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHK-----LEH------- 278
+ + + N+I + AC + VI EY S+G+LR YL LE+
Sbjct: 81 KMIG-----KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHN 135
Query: 279 --KTLPLPKLIAIALDIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIACEEVY 336
+ L L++ A +ARGMEY+ S+ IHRDL NVL+ ++ +KIADFG+A + +
Sbjct: 136 PEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHH 195
Query: 337 CDALSDDPGT---YRWMAPEMIKHKSYGRKVDVYSFGLILWEMVA-GTIPYEEMNPIQAA 392
D +WMAPE + + Y + DV+SFG++LWE+ G PY + P++
Sbjct: 196 IDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGV-PVEEL 254
Query: 393 FAVVNKNLRPAIPGDCPPAMAALIEQCWSLQPDKRPEFWHIVKVLEQF 440
F ++ + R P +C + ++ CW P +RP F +V+ L++
Sbjct: 255 FKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 302
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 124 bits (312), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 88/288 (30%), Positives = 143/288 (49%), Gaps = 34/288 (11%)
Query: 180 QLFLGLRFAHGAHSRLYH----GIYKDEP-----VAVKIIRIPDDDENETLAARLEKQFN 230
+L LG GA ++ G+ KD+P VAVK+++ D E + E +
Sbjct: 21 RLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLK-SDATEKDLSDLISEMEMM 79
Query: 231 REVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHK-----LEH------- 278
+ + + N+I + AC + VI EY S+G+LR YL LE+
Sbjct: 80 KMIG-----KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHN 134
Query: 279 --KTLPLPKLIAIALDIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIACEEVY 336
+ L L++ A +ARGMEY+ S+ IHRDL NVL+ ++ +KIADFG+A + +
Sbjct: 135 PEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHH 194
Query: 337 CDALSDDPGT---YRWMAPEMIKHKSYGRKVDVYSFGLILWEMVA-GTIPYEEMNPIQAA 392
D +WMAPE + + Y + DV+SFG++LWE+ G PY + P++
Sbjct: 195 IDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGV-PVEEL 253
Query: 393 FAVVNKNLRPAIPGDCPPAMAALIEQCWSLQPDKRPEFWHIVKVLEQF 440
F ++ + R P +C + ++ CW P +RP F +V+ L++
Sbjct: 254 FKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 301
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 88/289 (30%), Positives = 143/289 (49%), Gaps = 34/289 (11%)
Query: 179 SQLFLGLRFAHGAHSRLYH----GIYKDEP-----VAVKIIRIPDDDENETLAARLEKQF 229
+L LG GA ++ G+ KD+P VAVK+++ D E + E +
Sbjct: 28 DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLK-SDATEKDLSDLISEMEM 86
Query: 230 NREVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHK-----LEH------ 278
+ + + N+I + AC + VI EY S+G+LR YL LE+
Sbjct: 87 MKMIG-----KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSH 141
Query: 279 ---KTLPLPKLIAIALDIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIACEEV 335
+ L L++ A +ARGMEY+ S+ IHRDL NVL+ ++ +KIADFG+A +
Sbjct: 142 NPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIH 201
Query: 336 YCDALSDDPGT---YRWMAPEMIKHKSYGRKVDVYSFGLILWEMVA-GTIPYEEMNPIQA 391
+ D +WMAPE + + Y + DV+SFG++LWE+ G PY + P++
Sbjct: 202 HIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGV-PVEE 260
Query: 392 AFAVVNKNLRPAIPGDCPPAMAALIEQCWSLQPDKRPEFWHIVKVLEQF 440
F ++ + R P +C + ++ CW P +RP F +V+ L++
Sbjct: 261 LFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 309
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 124 bits (311), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 79/286 (27%), Positives = 137/286 (47%), Gaps = 15/286 (5%)
Query: 166 NAVDAADEHTVDLSQLFLGLRFAHGAHSRLYHGIYKDEPVAVKIIRIPDDDENETLAARL 225
++V DE V ++ L G+ +Y G +D R+ NE+ + R
Sbjct: 4 SSVFVPDEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRE 63
Query: 226 EKQFNREVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKL--EHKTLP- 282
+F E +++ +V++ + K V+ E ++ G L++YL L E + P
Sbjct: 64 RIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPG 123
Query: 283 -----LPKLIAIALDIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIACEEVYC 337
L ++I +A +IA GM Y++++ +HRDL N ++ +F +KI DFG+ ++Y
Sbjct: 124 RPPPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMT-RDIYE 182
Query: 338 DALSDDPGT----YRWMAPEMIKHKSYGRKVDVYSFGLILWEMVA-GTIPYEEMNPIQAA 392
A G RWMAPE +K + D++SFG++LWE+ + PY+ ++ Q
Sbjct: 183 TAYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVL 242
Query: 393 FAVVNKNLRPAIPGDCPPAMAALIEQCWSLQPDKRPEFWHIVKVLE 438
V++ P +CP + L+ CW P RP F IV +L+
Sbjct: 243 KFVMDGGYLDQ-PDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLK 287
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 124 bits (311), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 81/288 (28%), Positives = 137/288 (47%), Gaps = 29/288 (10%)
Query: 172 DEHTVDLSQLFLGLRFAHGAHSRLYHGI----YKDEP---VAVKIIRIPDDDENETLAAR 224
DE V ++ + G+ +Y G+ KDEP VA+K + NE + R
Sbjct: 5 DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTV-------NEAASMR 57
Query: 225 LEKQFNREVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKL--EHKTLP 282
+F E +++ + +V++ + + VI E ++ G L++YL L E + P
Sbjct: 58 ERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNP 117
Query: 283 ------LPKLIAIALDIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIACEEVY 336
L K+I +A +IA GM Y+++ +HRDL N + ++F +KI DFG+ ++Y
Sbjct: 118 VLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCXVAEDFTVKIGDFGMT-RDIY 176
Query: 337 CDALSDDPGT----YRWMAPEMIKHKSYGRKVDVYSFGLILWEMVA-GTIPYEEMNPIQA 391
G RWM+PE +K + DV+SFG++LWE+ PY+ ++ Q
Sbjct: 177 ETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQV 236
Query: 392 AFAVVNKNLRPAIPGDCPPAMAALIEQCWSLQPDKRPEFWHIVKVLEQ 439
V+ L P +CP + L+ CW P RP F I+ +++
Sbjct: 237 LRFVMEGGLLDK-PDNCPDMLLELMRMCWQYNPKMRPSFLEIISSIKE 283
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 83/304 (27%), Positives = 140/304 (46%), Gaps = 34/304 (11%)
Query: 156 KYFDHGGVRVNAVDAADEHTVDLSQLFLGLRFAHGAHSRLYHGI----YKDEP---VAVK 208
+YF V V DE V ++ + G+ +Y G+ KDEP VA+K
Sbjct: 7 EYFSAADVYV-----PDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIK 61
Query: 209 IIRIPDDDENETLAARLEKQFNREVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGS 268
+ NE + R +F E +++ + +V++ + + VI E ++ G
Sbjct: 62 TV-------NEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGD 114
Query: 269 LRAYLHKLEHKTL--------PLPKLIAIALDIARGMEYIHSQGVIHRDLKPENVLIDQE 320
L++YL L L K+I +A +IA GM Y+++ +HRDL N ++ ++
Sbjct: 115 LKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAED 174
Query: 321 FHLKIADFGIACEEVYCDALSDDPGT----YRWMAPEMIKHKSYGRKVDVYSFGLILWEM 376
F +KI DFG+ ++Y G RWM+PE +K + DV+SFG++LWE+
Sbjct: 175 FTVKIGDFGMT-RDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI 233
Query: 377 VA-GTIPYEEMNPIQAAFAVVNKNLRPAIPGDCPPAMAALIEQCWSLQPDKRPEFWHIVK 435
PY+ ++ Q V+ L P +CP + L+ CW P RP F I+
Sbjct: 234 ATLAEQPYQGLSNEQVLRFVMEGGLLDK-PDNCPDMLFELMRMCWQYNPKMRPSFLEIIS 292
Query: 436 VLEQ 439
+++
Sbjct: 293 SIKE 296
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 79/288 (27%), Positives = 135/288 (46%), Gaps = 29/288 (10%)
Query: 172 DEHTVDLSQLFLGLRFAHGAHSRLYHGI----YKDEP---VAVKIIRIPDDDENETLAAR 224
DE V ++ + G+ +Y G+ KDEP VA+K + NE + R
Sbjct: 8 DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTV-------NEAASMR 60
Query: 225 LEKQFNREVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTL--- 281
+F E +++ + +V++ + + VI E ++ G L++YL L
Sbjct: 61 ERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNP 120
Query: 282 -----PLPKLIAIALDIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIACEEVY 336
L K+I +A +IA GM Y+++ +HRDL N ++ ++F +KI DFG+ ++Y
Sbjct: 121 VLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMT-RDIY 179
Query: 337 CDALSDDPGT----YRWMAPEMIKHKSYGRKVDVYSFGLILWEMVA-GTIPYEEMNPIQA 391
G RWM+PE +K + DV+SFG++LWE+ PY+ ++ Q
Sbjct: 180 ETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQV 239
Query: 392 AFAVVNKNLRPAIPGDCPPAMAALIEQCWSLQPDKRPEFWHIVKVLEQ 439
V+ L P +CP + L+ CW P RP F I+ +++
Sbjct: 240 LRFVMEGGLLDK-PDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKE 286
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 71/276 (25%), Positives = 134/276 (48%), Gaps = 18/276 (6%)
Query: 172 DEHTVDLSQLFLGLRFAHGAHSRLYHGIYKDEPVAVKIIRIPDDDENETLAARLEKQFNR 231
D + + ++ F RL +D VA+K +++ + + F
Sbjct: 41 DASCIKIERVIGAGEFGEVCSGRLKLPGKRDVAVAIKTLKV-------GYTEKQRRDFLC 93
Query: 232 EVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIAL 291
E +++ + +PNV+ + ++ E++ G+L A+L K + + + +L+ +
Sbjct: 94 EASIMGQFDHPNVVHLEGVVTRGKPVMIVIEFMENGALDAFLRKHDGQ-FTVIQLVGMLR 152
Query: 292 DIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIAC------EEVYCDALSDDPG 345
IA GM Y+ G +HRDL N+L++ K++DFG++ E VY P
Sbjct: 153 GIAAGMRYLADMGYVHRDLAARNILVNSNLVCKVSDFGLSRVIEDDPEAVYTTTGGKIP- 211
Query: 346 TYRWMAPEMIKHKSYGRKVDVYSFGLILWEMVA-GTIPYEEMNPIQAAFAVVNKNLRPAI 404
RW APE I+++ + DV+S+G+++WE+++ G PY +M+ Q + + R
Sbjct: 212 -VRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSN-QDVIKAIEEGYRLPA 269
Query: 405 PGDCPPAMAALIEQCWSLQPDKRPEFWHIVKVLEQF 440
P DCP + L+ CW + +RP+F IV +L++
Sbjct: 270 PMDCPAGLHQLMLDCWQKERAERPKFEQIVGILDKM 305
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 123 bits (309), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 83/263 (31%), Positives = 135/263 (51%), Gaps = 16/263 (6%)
Query: 186 RFAHGAHSRLYHGIYKDEP-VAVKIIRIPDDDENETLAARLEKQFNREVALLSRLHNPNV 244
+ G ++ G Y + VAVK ++ P T++ + F E L+ L + +
Sbjct: 19 KLGAGQFGEVWMGYYNNSTKVAVKTLK-PG-----TMSVQ---AFLEEANLMKTLQHDKL 69
Query: 245 IKFVAAC-KKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIALDIARGMEYIHSQ 303
++ A K+ P+Y +ITE++++GSL +L E + LPKLI + IA GM YI +
Sbjct: 70 VRLYAVVTKEEPIY-IITEFMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERK 128
Query: 304 GVIHRDLKPENVLIDQEFHLKIADFGIA--CEEVYCDALSDDPGTYRWMAPEMIKHKSYG 361
IHRDL+ NVL+ + KIADFG+A E+ A +W APE I +
Sbjct: 129 NYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGCFT 188
Query: 362 RKVDVYSFGLILWEMVA-GTIPYEEMNPIQAAFAVVNKNLRPAIPGDCPPAMAALIEQCW 420
K +V+SFG++L+E+V G IPY A+ P + +CP + +++ CW
Sbjct: 189 IKSNVWSFGILLYEIVTYGKIPYPGRTNADVMSALSQGYRMPRME-NCPDELYDIMKMCW 247
Query: 421 SLQPDKRPEFWHIVKVLEQFETS 443
+ ++RP F ++ VL+ F T+
Sbjct: 248 KEKAEERPTFDYLQSVLDDFYTA 270
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 123 bits (308), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 79/290 (27%), Positives = 139/290 (47%), Gaps = 15/290 (5%)
Query: 162 GVRVNAVDAADEHTVDLSQLFLGLRFAHGAHSRLYHGIYKDEPVAVKIIRIPDDDENETL 221
GV ++V DE V ++ L G+ +Y G +D R+ NE+
Sbjct: 1 GVFPSSVYVPDEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESA 60
Query: 222 AARLEKQFNREVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKL--EHK 279
+ R +F E +++ +V++ + K V+ E ++ G L++YL L E +
Sbjct: 61 SLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAE 120
Query: 280 TLP------LPKLIAIALDIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIACE 333
P L ++I +A +IA GM Y++++ +HR+L N ++ +F +KI DFG+
Sbjct: 121 NNPGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRNLAARNCMVAHDFTVKIGDFGMT-R 179
Query: 334 EVYCDALSDDPGT----YRWMAPEMIKHKSYGRKVDVYSFGLILWEMVA-GTIPYEEMNP 388
++Y G RWMAPE +K + D++SFG++LWE+ + PY+ ++
Sbjct: 180 DIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSN 239
Query: 389 IQAAFAVVNKNLRPAIPGDCPPAMAALIEQCWSLQPDKRPEFWHIVKVLE 438
Q V++ P +CP + L+ CW P+ RP F IV +L+
Sbjct: 240 EQVLKFVMDGGYLDQ-PDNCPERVTDLMRMCWQFNPNMRPTFLEIVNLLK 288
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 122 bits (307), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 77/285 (27%), Positives = 135/285 (47%), Gaps = 13/285 (4%)
Query: 166 NAVDAADEHTVDLSQLFLGLRFAHGAHSRLYHGIYKDEPVAVKIIRIPDDDENETLAARL 225
++V DE V ++ L G+ +Y G +D R+ NE+ + R
Sbjct: 4 SSVYVPDEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRE 63
Query: 226 EKQFNREVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKL--EHKTLP- 282
+F E +++ +V++ + K V+ E ++ G L++YL L E + P
Sbjct: 64 RIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPG 123
Query: 283 -----LPKLIAIALDIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIACEEVYC 337
L ++I +A +IA GM Y++++ +HRDL N ++ +F +KI DFG+ +
Sbjct: 124 RPPPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXET 183
Query: 338 DALSDDPGTY---RWMAPEMIKHKSYGRKVDVYSFGLILWEMVA-GTIPYEEMNPIQAAF 393
D RWMAPE +K + D++SFG++LWE+ + PY+ ++ Q
Sbjct: 184 DXXRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLK 243
Query: 394 AVVNKNLRPAIPGDCPPAMAALIEQCWSLQPDKRPEFWHIVKVLE 438
V++ P +CP + L+ CW P+ RP F IV +L+
Sbjct: 244 FVMDGGYLDQ-PDNCPERVTDLMRMCWQFNPNMRPTFLEIVNLLK 287
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 122 bits (307), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 116/222 (52%), Gaps = 11/222 (4%)
Query: 227 KQFNREVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKL 286
+ F E +++ + +PNVI K +ITE++ GSL ++L + + + + +L
Sbjct: 79 RDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQ-FTVIQL 137
Query: 287 IAIALDIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIA-------CEEVYCDA 339
+ + IA GM+Y+ +HRDL N+L++ K++DFG++ + Y A
Sbjct: 138 VGMLRGIAAGMKYLADMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSA 197
Query: 340 LSDDPGTYRWMAPEMIKHKSYGRKVDVYSFGLILWEMVA-GTIPYEEMNPIQAAFAVVNK 398
L RW APE I+++ + DV+S+G+++WE+++ G PY +M Q + +
Sbjct: 198 LGGKI-PIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTN-QDVINAIEQ 255
Query: 399 NLRPAIPGDCPPAMAALIEQCWSLQPDKRPEFWHIVKVLEQF 440
+ R P DCP A+ L+ CW + RP+F IV L++
Sbjct: 256 DYRLPPPMDCPSALHQLMLDCWQKDRNHRPKFGQIVNTLDKM 297
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 122 bits (306), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 77/285 (27%), Positives = 134/285 (47%), Gaps = 13/285 (4%)
Query: 166 NAVDAADEHTVDLSQLFLGLRFAHGAHSRLYHGIYKDEPVAVKIIRIPDDDENETLAARL 225
++V DE V ++ L G+ +Y G +D R+ NE+ + R
Sbjct: 1 SSVFVPDEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRE 60
Query: 226 EKQFNREVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKL--EHKTLP- 282
+F E +++ +V++ + K V+ E ++ G L++YL L E + P
Sbjct: 61 RIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPG 120
Query: 283 -----LPKLIAIALDIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIACEEVYC 337
L ++I +A +IA GM Y++++ +HRDL N ++ +F +KI DFG+ +
Sbjct: 121 RPPPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXET 180
Query: 338 DALSDDPGTY---RWMAPEMIKHKSYGRKVDVYSFGLILWEMVA-GTIPYEEMNPIQAAF 393
D RWMAPE +K + D++SFG++LWE+ + PY+ ++ Q
Sbjct: 181 DXXRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLK 240
Query: 394 AVVNKNLRPAIPGDCPPAMAALIEQCWSLQPDKRPEFWHIVKVLE 438
V++ P +CP + L+ CW P RP F IV +L+
Sbjct: 241 FVMDGGYLDQ-PDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLK 284
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 122 bits (306), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 78/286 (27%), Positives = 136/286 (47%), Gaps = 15/286 (5%)
Query: 166 NAVDAADEHTVDLSQLFLGLRFAHGAHSRLYHGIYKDEPVAVKIIRIPDDDENETLAARL 225
++V DE V ++ L G+ +Y G +D R+ NE+ + R
Sbjct: 4 SSVFVPDEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRE 63
Query: 226 EKQFNREVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKL--EHKTLP- 282
+F E +++ +V++ + K V+ E ++ G L++YL L E + P
Sbjct: 64 RIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPG 123
Query: 283 -----LPKLIAIALDIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIACEEVYC 337
L ++I +A +IA GM Y++++ +HRDL N ++ +F +KI DFG+ ++Y
Sbjct: 124 RPPPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMT-RDIYE 182
Query: 338 DALSDDPGT----YRWMAPEMIKHKSYGRKVDVYSFGLILWEMVA-GTIPYEEMNPIQAA 392
G RWMAPE +K + D++SFG++LWE+ + PY+ ++ Q
Sbjct: 183 TDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVL 242
Query: 393 FAVVNKNLRPAIPGDCPPAMAALIEQCWSLQPDKRPEFWHIVKVLE 438
V++ P +CP + L+ CW P RP F IV +L+
Sbjct: 243 KFVMDGGYLDQ-PDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLK 287
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 122 bits (306), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 77/285 (27%), Positives = 134/285 (47%), Gaps = 13/285 (4%)
Query: 166 NAVDAADEHTVDLSQLFLGLRFAHGAHSRLYHGIYKDEPVAVKIIRIPDDDENETLAARL 225
++V DE V ++ L G+ +Y G +D R+ NE+ + R
Sbjct: 4 SSVFVPDEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRE 63
Query: 226 EKQFNREVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKL--EHKTLP- 282
+F E +++ +V++ + K V+ E ++ G L++YL L E + P
Sbjct: 64 RIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPG 123
Query: 283 -----LPKLIAIALDIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIACEEVYC 337
L ++I +A +IA GM Y++++ +HRDL N ++ +F +KI DFG+ +
Sbjct: 124 RPPPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXET 183
Query: 338 DALSDDPGTY---RWMAPEMIKHKSYGRKVDVYSFGLILWEMVA-GTIPYEEMNPIQAAF 393
D RWMAPE +K + D++SFG++LWE+ + PY+ ++ Q
Sbjct: 184 DXXRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLK 243
Query: 394 AVVNKNLRPAIPGDCPPAMAALIEQCWSLQPDKRPEFWHIVKVLE 438
V++ P +CP + L+ CW P RP F IV +L+
Sbjct: 244 FVMDGGYLDQ-PDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLK 287
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 121 bits (304), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 75/241 (31%), Positives = 124/241 (51%), Gaps = 22/241 (9%)
Query: 205 VAVKIIRIPDDDENETLAARLEKQFNREVALLSRLHNPNVIKFVAACKKP-PVYCVITEY 263
VAVK+I+ E+E F +E + +L +P ++KF C K P+Y ++TEY
Sbjct: 35 VAVKMIKEGSMSEDE---------FFQEAQTMMKLSHPKLVKFYGVCSKEYPIY-IVTEY 84
Query: 264 LSEGSLRAYLHKLEHKTLPLPKLIAIALDIARGMEYIHSQGVIHRDLKPENVLIDQEFHL 323
+S G L YL + K L +L+ + D+ GM ++ S IHRDL N L+D++ +
Sbjct: 85 ISNGCLLNYL-RSHGKGLEPSQLLEMCYDVCEGMAFLESHQFIHRDLAARNCLVDRDLCV 143
Query: 324 KIADFGIACEEVYCDALSDDPGT---YRWMAPEMIKHKSYGRKVDVYSFGLILWEMVA-G 379
K++DFG+ V D GT +W APE+ + Y K DV++FG+++WE+ + G
Sbjct: 144 KVSDFGMT-RYVLDDQYVSSVGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLG 202
Query: 380 TIPYEEMNPIQAAFAVVNKN--LRPAIPGDCPPAMAALIEQCWSLQPDKRPEFWHIVKVL 437
+PY+ + V + RP + D + ++ CW P+KRP F ++ +
Sbjct: 203 KMPYDLYTNSEVVLKVSQGHRLYRPHLASD---TIYQIMYSCWHELPEKRPTFQQLLSSI 259
Query: 438 E 438
E
Sbjct: 260 E 260
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 121 bits (304), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 78/278 (28%), Positives = 142/278 (51%), Gaps = 27/278 (9%)
Query: 176 VDLSQLFLGLRFAHGAHSRLYHGIYKDEPVAVKIIRIPDDDENETLAARLEKQFNREVAL 235
+D QL + L+ G ++ + VK++++ D + R + FN E
Sbjct: 7 IDFKQLNFLTKLNENHSGELWKGRWQGNDIVVKVLKVRD------WSTRKSRDFNEECPR 60
Query: 236 LSRLHNPNVIKFVAACKKPPVY--CVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIALDI 293
L +PNV+ + AC+ PP +IT ++ GSL LH+ + + + + ALD+
Sbjct: 61 LRIFSHPNVLPVLGACQSPPAPHPTLITHWMPYGSLYNVLHEGTNFVVDQSQAVKFALDM 120
Query: 294 ARGMEYIHS-QGVIHRD-LKPENVLIDQEFHLKI--ADFGIACEE---VYCDALSDDPGT 346
ARGM ++H+ + +I R L +V+ID++ +I AD + + +Y A
Sbjct: 121 ARGMAFLHTLEPLIPRHALNSRSVMIDEDMTARISMADVKFSFQSPGRMYAPA------- 173
Query: 347 YRWMAPEMIKHK---SYGRKVDVYSFGLILWEMVAGTIPYEEMNPIQAAFAVVNKNLRPA 403
W+APE ++ K + R D++SF ++LWE+V +P+ +++ ++ V + LRP
Sbjct: 174 --WVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLSNMEIGMKVALEGLRPT 231
Query: 404 IPGDCPPAMAALIEQCWSLQPDKRPEFWHIVKVLEQFE 441
IP P ++ L++ C + P KRP+F IV +LE+ +
Sbjct: 232 IPPGISPHVSKLMKICMNEDPAKRPKFDMIVPILEKMQ 269
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 121 bits (304), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 77/286 (26%), Positives = 137/286 (47%), Gaps = 15/286 (5%)
Query: 166 NAVDAADEHTVDLSQLFLGLRFAHGAHSRLYHGIYKDEPVAVKIIRIPDDDENETLAARL 225
++V DE V ++ L G+ +Y G +D R+ NE+ + R
Sbjct: 4 SSVYVPDEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRE 63
Query: 226 EKQFNREVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKL--EHKTLP- 282
+F E +++ +V++ + K V+ E ++ G L++YL L E + P
Sbjct: 64 RIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPG 123
Query: 283 -----LPKLIAIALDIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIACEEVYC 337
L ++I +A +IA GM Y++++ +HR+L N ++ +F +KI DFG+ ++Y
Sbjct: 124 RPPPTLQEMIQMAAEIADGMAYLNAKKFVHRNLAARNCMVAHDFTVKIGDFGMT-RDIYE 182
Query: 338 DALSDDPGT----YRWMAPEMIKHKSYGRKVDVYSFGLILWEMVA-GTIPYEEMNPIQAA 392
G RWMAPE +K + D++SFG++LWE+ + PY+ ++ Q
Sbjct: 183 TDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVL 242
Query: 393 FAVVNKNLRPAIPGDCPPAMAALIEQCWSLQPDKRPEFWHIVKVLE 438
V++ P +CP + L+ CW P+ RP F IV +L+
Sbjct: 243 KFVMDGGYLDQ-PDNCPERVTDLMRMCWQFNPNMRPTFLEIVNLLK 287
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 121 bits (303), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 82/262 (31%), Positives = 134/262 (51%), Gaps = 34/262 (12%)
Query: 205 VAVKIIRIPDDDENETLAARLEKQFNREVALLSRLHNPNVIKFVAACKKPPVYCVITEYL 264
VAVK+++ ++ + + L +FN +L ++++P+VIK AC + +I EY
Sbjct: 56 VAVKMLK---ENASPSELRDLLSEFN----VLKQVNHPHVIKLYGACSQDGPLLLIVEYA 108
Query: 265 SEGSLRAYLHK-------------------LEH---KTLPLPKLIAIALDIARGMEYIHS 302
GSLR +L + L+H + L + LI+ A I++GM+Y+
Sbjct: 109 KYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAE 168
Query: 303 QGVIHRDLKPENVLIDQEFHLKIADFGIACEEVYCDAL---SDDPGTYRWMAPEMIKHKS 359
++HRDL N+L+ + +KI+DFG++ + D+ S +WMA E +
Sbjct: 169 MSLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSXVKRSQGRIPVKWMAIESLFDHI 228
Query: 360 YGRKVDVYSFGLILWEMVA-GTIPYEEMNPIQAAFAVVNKNLRPAIPGDCPPAMAALIEQ 418
Y + DV+SFG++LWE+V G PY + P + F ++ R P +C M L+ Q
Sbjct: 229 YTTQSDVWSFGVLLWEIVTLGGNPYPGIPP-ERLFNLLKTGHRMERPDNCSEEMYRLMLQ 287
Query: 419 CWSLQPDKRPEFWHIVKVLEQF 440
CW +PDKRP F I K LE+
Sbjct: 288 CWKQEPDKRPVFADISKDLEKM 309
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 120 bits (302), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 82/262 (31%), Positives = 134/262 (51%), Gaps = 34/262 (12%)
Query: 205 VAVKIIRIPDDDENETLAARLEKQFNREVALLSRLHNPNVIKFVAACKKPPVYCVITEYL 264
VAVK+++ ++ + + L +FN +L ++++P+VIK AC + +I EY
Sbjct: 56 VAVKMLK---ENASPSELRDLLSEFN----VLKQVNHPHVIKLYGACSQDGPLLLIVEYA 108
Query: 265 SEGSLRAYLHK-------------------LEH---KTLPLPKLIAIALDIARGMEYIHS 302
GSLR +L + L+H + L + LI+ A I++GM+Y+
Sbjct: 109 KYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAE 168
Query: 303 QGVIHRDLKPENVLIDQEFHLKIADFGIACEEVYCDAL---SDDPGTYRWMAPEMIKHKS 359
++HRDL N+L+ + +KI+DFG++ + D+ S +WMA E +
Sbjct: 169 MKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSXVKRSQGRIPVKWMAIESLFDHI 228
Query: 360 YGRKVDVYSFGLILWEMVA-GTIPYEEMNPIQAAFAVVNKNLRPAIPGDCPPAMAALIEQ 418
Y + DV+SFG++LWE+V G PY + P + F ++ R P +C M L+ Q
Sbjct: 229 YTTQSDVWSFGVLLWEIVTLGGNPYPGIPP-ERLFNLLKTGHRMERPDNCSEEMYRLMLQ 287
Query: 419 CWSLQPDKRPEFWHIVKVLEQF 440
CW +PDKRP F I K LE+
Sbjct: 288 CWKQEPDKRPVFADISKDLEKM 309
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 120 bits (302), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 82/262 (31%), Positives = 134/262 (51%), Gaps = 34/262 (12%)
Query: 205 VAVKIIRIPDDDENETLAARLEKQFNREVALLSRLHNPNVIKFVAACKKPPVYCVITEYL 264
VAVK+++ ++ + + L +FN +L ++++P+VIK AC + +I EY
Sbjct: 56 VAVKMLK---ENASPSELRDLLSEFN----VLKQVNHPHVIKLYGACSQDGPLLLIVEYA 108
Query: 265 SEGSLRAYLHK-------------------LEH---KTLPLPKLIAIALDIARGMEYIHS 302
GSLR +L + L+H + L + LI+ A I++GM+Y+
Sbjct: 109 KYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAE 168
Query: 303 QGVIHRDLKPENVLIDQEFHLKIADFGIACEEVYCDAL---SDDPGTYRWMAPEMIKHKS 359
++HRDL N+L+ + +KI+DFG++ + D+ S +WMA E +
Sbjct: 169 MKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHI 228
Query: 360 YGRKVDVYSFGLILWEMVA-GTIPYEEMNPIQAAFAVVNKNLRPAIPGDCPPAMAALIEQ 418
Y + DV+SFG++LWE+V G PY + P + F ++ R P +C M L+ Q
Sbjct: 229 YTTQSDVWSFGVLLWEIVTLGGNPYPGIPP-ERLFNLLKTGHRMERPDNCSEEMYRLMLQ 287
Query: 419 CWSLQPDKRPEFWHIVKVLEQF 440
CW +PDKRP F I K LE+
Sbjct: 288 CWKQEPDKRPVFADISKDLEKM 309
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 83/278 (29%), Positives = 141/278 (50%), Gaps = 19/278 (6%)
Query: 166 NAVDAADEH----TVDLSQLFLGL-RFAHGAHSRLYHGI--YKDEPVAVKIIRIPDDDEN 218
+ VD E+ ++D +LF L + G+ ++ GI + VA+KII +
Sbjct: 9 SGVDLGTENLYFQSMDPEELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDL------ 62
Query: 219 ETLAARLEKQFNREVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEH 278
A + +E+ +LS+ +P V K+ + K +I EYL GS L LE
Sbjct: 63 -EEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSA---LDLLEP 118
Query: 279 KTLPLPKLIAIALDIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIACEEVYCD 338
L ++ I +I +G++Y+HS+ IHRD+K NVL+ + +K+ADFG+A +
Sbjct: 119 GPLDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQ 178
Query: 339 ALSDD-PGTYRWMAPEMIKHKSYGRKVDVYSFGLILWEMVAGTIPYEEMNPIQAAFAVVN 397
+ GT WMAPE+IK +Y K D++S G+ E+ G P+ E++P++ F ++
Sbjct: 179 IKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLF-LIP 237
Query: 398 KNLRPAIPGDCPPAMAALIEQCWSLQPDKRPEFWHIVK 435
KN P + G+ + +E C + +P RP ++K
Sbjct: 238 KNNPPTLEGNYSKPLKEFVEACLNKEPSFRPTAKELLK 275
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 120 bits (300), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 115/222 (51%), Gaps = 11/222 (4%)
Query: 227 KQFNREVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKL 286
+ F E +++ + +PNVI K +ITE++ GSL ++L + + + + +L
Sbjct: 53 RDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQ-FTVIQL 111
Query: 287 IAIALDIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIA-------CEEVYCDA 339
+ + IA GM+Y+ +HR L N+L++ K++DFG++ + Y A
Sbjct: 112 VGMLRGIAAGMKYLADMNYVHRALAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSA 171
Query: 340 LSDDPGTYRWMAPEMIKHKSYGRKVDVYSFGLILWEMVA-GTIPYEEMNPIQAAFAVVNK 398
L RW APE I+++ + DV+S+G+++WE+++ G PY +M Q + +
Sbjct: 172 LGGKI-PIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTN-QDVINAIEQ 229
Query: 399 NLRPAIPGDCPPAMAALIEQCWSLQPDKRPEFWHIVKVLEQF 440
+ R P DCP A+ L+ CW + RP+F IV L++
Sbjct: 230 DYRLPPPMDCPSALHQLMLDCWQKDRNHRPKFGQIVNTLDKM 271
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 120 bits (300), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 80/265 (30%), Positives = 136/265 (51%), Gaps = 15/265 (5%)
Query: 175 TVDLSQLFLGL-RFAHGAHSRLYHGI--YKDEPVAVKIIRIPDDDENETLAARLEKQFNR 231
++D +LF L + G+ ++ GI + VA+KII + A + +
Sbjct: 2 SLDPEELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDL-------EEAEDEIEDIQQ 54
Query: 232 EVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIAL 291
E+ +LS+ +P V K+ + K +I EYL GS L LE L ++ I
Sbjct: 55 EITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSA---LDLLEPGPLDETQIATILR 111
Query: 292 DIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIACEEVYCDALSDD-PGTYRWM 350
+I +G++Y+HS+ IHRD+K NVL+ + +K+ADFG+A + + GT WM
Sbjct: 112 EILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFVGTPFWM 171
Query: 351 APEMIKHKSYGRKVDVYSFGLILWEMVAGTIPYEEMNPIQAAFAVVNKNLRPAIPGDCPP 410
APE+IK +Y K D++S G+ E+ G P+ E++P++ F ++ KN P + G+
Sbjct: 172 APEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLF-LIPKNNPPTLEGNYSK 230
Query: 411 AMAALIEQCWSLQPDKRPEFWHIVK 435
+ +E C + +P RP ++K
Sbjct: 231 PLKEFVEACLNKEPSFRPTAKELLK 255
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 119 bits (299), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 80/265 (30%), Positives = 136/265 (51%), Gaps = 15/265 (5%)
Query: 175 TVDLSQLFLGL-RFAHGAHSRLYHGI--YKDEPVAVKIIRIPDDDENETLAARLEKQFNR 231
++D +LF L + G+ ++ GI + VA+KII + A + +
Sbjct: 2 SLDPEELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDL-------EEAEDEIEDIQQ 54
Query: 232 EVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIAL 291
E+ +LS+ +P V K+ + K +I EYL GS L LE L ++ I
Sbjct: 55 EITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSA---LDLLEPGPLDETQIATILR 111
Query: 292 DIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIACEEVYCDALSDD-PGTYRWM 350
+I +G++Y+HS+ IHRD+K NVL+ + +K+ADFG+A + + GT WM
Sbjct: 112 EILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNXFVGTPFWM 171
Query: 351 APEMIKHKSYGRKVDVYSFGLILWEMVAGTIPYEEMNPIQAAFAVVNKNLRPAIPGDCPP 410
APE+IK +Y K D++S G+ E+ G P+ E++P++ F ++ KN P + G+
Sbjct: 172 APEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLF-LIPKNNPPTLEGNYSK 230
Query: 411 AMAALIEQCWSLQPDKRPEFWHIVK 435
+ +E C + +P RP ++K
Sbjct: 231 PLKEFVEACLNKEPSFRPTAKELLK 255
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 119 bits (298), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 73/265 (27%), Positives = 127/265 (47%), Gaps = 15/265 (5%)
Query: 187 FAHGAHSRLYHGIYKDEPVAVKIIRIPDDDENETLAARLEKQFNREVALLSRLHNPNVIK 246
G+ +Y G +D R+ NE+ + R +F E +++ +V++
Sbjct: 24 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 83
Query: 247 FVAACKKPPVYCVITEYLSEGSLRAYLHKL--EHKTLP------LPKLIAIALDIARGME 298
+ K V+ E ++ G L++YL L E + P L ++I +A +IA GM
Sbjct: 84 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 143
Query: 299 YIHSQGVIHRDLKPENVLIDQEFHLKIADFGIACEEVYCDALSDDPGT----YRWMAPEM 354
Y++++ +HRDL N ++ +F +KI DFG+ ++Y G RWMAPE
Sbjct: 144 YLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMT-RDIYETDYYRKGGKGLLPVRWMAPES 202
Query: 355 IKHKSYGRKVDVYSFGLILWEMVA-GTIPYEEMNPIQAAFAVVNKNLRPAIPGDCPPAMA 413
+K + D++SFG++LWE+ + PY+ ++ Q V++ P +CP +
Sbjct: 203 LKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYLDQ-PDNCPERVT 261
Query: 414 ALIEQCWSLQPDKRPEFWHIVKVLE 438
L+ CW P RP F IV +L+
Sbjct: 262 DLMRMCWQFNPKMRPTFLEIVNLLK 286
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 119 bits (298), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 80/263 (30%), Positives = 134/263 (50%), Gaps = 15/263 (5%)
Query: 177 DLSQLFLGL-RFAHGAHSRLYHGI--YKDEPVAVKIIRIPDDDENETLAARLEKQFNREV 233
D +LF L + G+ ++ GI + VA+KII + A + +E+
Sbjct: 19 DPEELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDL-------EEAEDEIEDIQQEI 71
Query: 234 ALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIALDI 293
+LS+ +P V K+ + K +I EYL GS L LE L ++ I +I
Sbjct: 72 TVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSA---LDLLEPGPLDETQIATILREI 128
Query: 294 ARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIACEEVYCDALSDD-PGTYRWMAP 352
+G++Y+HS+ IHRD+K NVL+ + +K+ADFG+A + + GT WMAP
Sbjct: 129 LKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNXFVGTPFWMAP 188
Query: 353 EMIKHKSYGRKVDVYSFGLILWEMVAGTIPYEEMNPIQAAFAVVNKNLRPAIPGDCPPAM 412
E+IK +Y K D++S G+ E+ G P+ E++P++ F ++ KN P + G+ +
Sbjct: 189 EVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLF-LIPKNNPPTLEGNYSKPL 247
Query: 413 AALIEQCWSLQPDKRPEFWHIVK 435
+E C + +P RP ++K
Sbjct: 248 KEFVEACLNKEPSFRPTAKELLK 270
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 119 bits (297), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 71/280 (25%), Positives = 132/280 (47%), Gaps = 24/280 (8%)
Query: 172 DEHTVDLSQLFLGLRFAHGAHSRLYHGIYKDEPVAVKIIRIPDDDENETLAARLEKQFNR 231
D V + ++ F RL K+ VA+K ++ R ++F
Sbjct: 12 DVSYVKIEEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLK-------GGYTERQRREFLS 64
Query: 232 EVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIAL 291
E +++ + +PN+I+ ++TE++ G+L ++L +L + +L+ +
Sbjct: 65 EASIMGQFEHPNIIRLEGVVTNSMPVMILTEFMENGALDSFL-RLNDGQFTVIQLVGMLR 123
Query: 292 DIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIACEEVYCDALSDDPGTY---- 347
IA GM Y+ +HRDL N+L++ K++DFG++ + + S DP TY
Sbjct: 124 GIASGMRYLAEMSYVHRDLAARNILVNSNLVCKVSDFGLS---RFLEENSSDP-TYTSSL 179
Query: 348 ------RWMAPEMIKHKSYGRKVDVYSFGLILWEMVA-GTIPYEEMNPIQAAFAVVNKNL 400
RW APE I + + D +S+G+++WE+++ G PY +M+ Q + ++
Sbjct: 180 GGKIPIRWTAPEAIAFRKFTSASDAWSYGIVMWEVMSFGERPYWDMSN-QDVINAIEQDY 238
Query: 401 RPAIPGDCPPAMAALIEQCWSLQPDKRPEFWHIVKVLEQF 440
R P DCP ++ L+ CW + RP F +V L++
Sbjct: 239 RLPPPPDCPTSLHQLMLDCWQKDRNARPRFPQVVSALDKM 278
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 118 bits (295), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 82/270 (30%), Positives = 137/270 (50%), Gaps = 16/270 (5%)
Query: 171 ADEHT-VDLSQLFLGL-RFAHGAHSRLYHGI--YKDEPVAVKIIRIPDDDENETLAARLE 226
A++H+ VD +LF L R G+ +Y GI + E VA+KII + A
Sbjct: 9 ANQHSRVDPEELFTKLDRIGKGSFGEVYKGIDNHTKEVVAIKIIDL-------EEAEDEI 61
Query: 227 KQFNREVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKL 286
+ +E+ +LS+ +P + ++ + K +I EYL GS L L+ L +
Sbjct: 62 EDIQQEITVLSQCDSPYITRYFGSYLKSTKLWIIMEYLGGGSA---LDLLKPGPLEETYI 118
Query: 287 IAIALDIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIACEEVYCDALSDD-PG 345
I +I +G++Y+HS+ IHRD+K NVL+ ++ +K+ADFG+A + + G
Sbjct: 119 ATILREILKGLDYLHSERKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNXFVG 178
Query: 346 TYRWMAPEMIKHKSYGRKVDVYSFGLILWEMVAGTIPYEEMNPIQAAFAVVNKNLRPAIP 405
T WMAPE+IK +Y K D++S G+ E+ G P +++P++ F ++ KN P +
Sbjct: 179 TPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPPNSDLHPMRVLF-LIPKNSPPTLE 237
Query: 406 GDCPPAMAALIEQCWSLQPDKRPEFWHIVK 435
G +E C + P RP ++K
Sbjct: 238 GQHSKPFKEFVEACLNKDPRFRPTAKELLK 267
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 118 bits (295), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 69/279 (24%), Positives = 130/279 (46%), Gaps = 22/279 (7%)
Query: 172 DEHTVDLSQLFLGLRFAHGAHSRLYHGIYKDEPVAVKIIRIPDDDENETLAARLEKQFNR 231
D V + ++ F RL K+ VA+K ++ R ++F
Sbjct: 14 DVSYVKIEEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLK-------GGYTERQRREFLS 66
Query: 232 EVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIAL 291
E +++ + +PN+I+ ++TE++ G+L ++L +L + +L+ +
Sbjct: 67 EASIMGQFEHPNIIRLEGVVTNSMPVMILTEFMENGALDSFL-RLNDGQFTVIQLVGMLR 125
Query: 292 DIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIACEEVYCDALSDDPGT----- 346
IA GM Y+ +HRDL N+L++ K++DFG++ + + S DP
Sbjct: 126 GIASGMRYLAEMSYVHRDLAARNILVNSNLVCKVSDFGLS---RFLEENSSDPTETSSLG 182
Query: 347 ----YRWMAPEMIKHKSYGRKVDVYSFGLILWEMVA-GTIPYEEMNPIQAAFAVVNKNLR 401
RW APE I + + D +S+G+++WE+++ G PY +M+ Q + ++ R
Sbjct: 183 GKIPIRWTAPEAIAFRKFTSASDAWSYGIVMWEVMSFGERPYWDMSN-QDVINAIEQDYR 241
Query: 402 PAIPGDCPPAMAALIEQCWSLQPDKRPEFWHIVKVLEQF 440
P DCP ++ L+ CW + RP F +V L++
Sbjct: 242 LPPPPDCPTSLHQLMLDCWQKDRNARPRFPQVVSALDKM 280
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 118 bits (295), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 73/274 (26%), Positives = 129/274 (47%), Gaps = 17/274 (6%)
Query: 175 TVDLSQLFLGLRFAHGAHSRLYHGIYKD-EPVAVKIIRIPDDDENETLAARLEKQFNREV 233
+D S+L G ++ G + + + VA+K IR A E+ F E
Sbjct: 4 VIDPSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIR---------EGAMSEEDFIEEA 54
Query: 234 ALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIALDI 293
++ +L +P +++ C + C++TE++ G L YL + + L+ + LD+
Sbjct: 55 EVMMKLSHPKLVQLYGVCLEQAPICLVTEFMEHGCLSDYL-RTQRGLFAAETLLGMCLDV 113
Query: 294 ARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIACEEVYCDALSDDPGT---YRWM 350
GM Y+ VIHRDL N L+ + +K++DFG+ V D + GT +W
Sbjct: 114 CEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMT-RFVLDDQYTSSTGTKFPVKWA 172
Query: 351 APEMIKHKSYGRKVDVYSFGLILWEMVA-GTIPYEEMNPIQAAFAVVNKNLRPAIPGDCP 409
+PE+ Y K DV+SFG+++WE+ + G IPYE + + ++ R P
Sbjct: 173 SPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVV-EDISTGFRLYKPRLAS 231
Query: 410 PAMAALIEQCWSLQPDKRPEFWHIVKVLEQFETS 443
+ ++ CW +P+ RP F +++ L + S
Sbjct: 232 THVYQIMNHCWRERPEDRPAFSRLLRQLAEIAES 265
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 77/270 (28%), Positives = 133/270 (49%), Gaps = 11/270 (4%)
Query: 190 GAHSRLYHGIYKDEPVAVKIIRIPDDDENETLAARLEKQFNREVALLSRLHNPNVIKFVA 249
G +YHG Y D+ A I+ + + + F RE L+ L++PNV+ +
Sbjct: 32 GHFGVVYHGEYIDQ--AQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALIG 89
Query: 250 ACKKPP-VYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIALDIARGMEYIHSQGVIHR 308
P + V+ Y+ G L ++ + + + LI+ L +ARGMEY+ Q +HR
Sbjct: 90 IMLPPEGLPHVLLPYMCHGDLLQFI-RSPQRNPTVKDLISFGLQVARGMEYLAEQKFVHR 148
Query: 309 DLKPENVLIDQEFHLKIADFGIACEEVYCDALSDDPGTY-----RWMAPEMIKHKSYGRK 363
DL N ++D+ F +K+ADFG+A + + + S + +W A E ++ + K
Sbjct: 149 DLAARNCMLDESFTVKVADFGLARDILDREYYSVQQHRHARLPVKWTALESLQTYRFTTK 208
Query: 364 VDVYSFGLILWEMVA-GTIPYEEMNPIQAAFAVVNKNLRPAIPGDCPPAMAALIEQCWSL 422
DV+SFG++LWE++ G PY ++P + P P CP ++ +++QCW
Sbjct: 209 SDVWSFGVLLWELLTRGAPPYRHIDPFDLTHFLAQGRRLPQ-PEYCPDSLYQVMQQCWEA 267
Query: 423 QPDKRPEFWHIVKVLEQFETSLACNGTLNL 452
P RP F +V +EQ ++L + + L
Sbjct: 268 DPAVRPTFRVLVGEVEQIVSALLGDHYVQL 297
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 116 bits (291), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 80/244 (32%), Positives = 124/244 (50%), Gaps = 23/244 (9%)
Query: 227 KQFNREVALLSRL-HNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHK---LE----- 277
+ F E+ +L +L H+PN+I + AC+ + EY G+L +L K LE
Sbjct: 70 RDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAF 129
Query: 278 ------HKTLPLPKLIAIALDIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIA 331
TL +L+ A D+ARGM+Y+ + IHRDL N+L+ + + KIADFG++
Sbjct: 130 AIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLS 189
Query: 332 -CEEVYC-DALSDDPGTYRWMAPEMIKHKSYGRKVDVYSFGLILWEMVA-GTIPYEEMNP 388
+EVY + P RWMA E + + Y DV+S+G++LWE+V+ G PY M
Sbjct: 190 RGQEVYVKKTMGRLP--VRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTC 247
Query: 389 IQAAFAVVNKNLRPAIPGDCPPAMAALIEQCWSLQPDKRPEFWHIVKVLEQF--ETSLAC 446
+ + + + R P +C + L+ QCW +P +RP F I+ L + E
Sbjct: 248 AE-LYEKLPQGYRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLEERKTYV 306
Query: 447 NGTL 450
N TL
Sbjct: 307 NTTL 310
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 116 bits (291), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 80/244 (32%), Positives = 124/244 (50%), Gaps = 23/244 (9%)
Query: 227 KQFNREVALLSRL-HNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHK---LE----- 277
+ F E+ +L +L H+PN+I + AC+ + EY G+L +L K LE
Sbjct: 60 RDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAF 119
Query: 278 ------HKTLPLPKLIAIALDIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIA 331
TL +L+ A D+ARGM+Y+ + IHRDL N+L+ + + KIADFG++
Sbjct: 120 AIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLS 179
Query: 332 -CEEVYC-DALSDDPGTYRWMAPEMIKHKSYGRKVDVYSFGLILWEMVA-GTIPYEEMNP 388
+EVY + P RWMA E + + Y DV+S+G++LWE+V+ G PY M
Sbjct: 180 RGQEVYVKKTMGRLP--VRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTC 237
Query: 389 IQAAFAVVNKNLRPAIPGDCPPAMAALIEQCWSLQPDKRPEFWHIVKVLEQF--ETSLAC 446
+ + + + R P +C + L+ QCW +P +RP F I+ L + E
Sbjct: 238 AE-LYEKLPQGYRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLEERKTYV 296
Query: 447 NGTL 450
N TL
Sbjct: 297 NTTL 300
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 116 bits (290), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 82/272 (30%), Positives = 141/272 (51%), Gaps = 12/272 (4%)
Query: 166 NAVDAADEHT-VDLSQLFLGLRFAHGAHSRLYHGIYKDEPVAVKIIRIPDDDENETLAAR 224
N+ +ADE + +L + + A +L I + VAVKII D+ + ++
Sbjct: 2 NSATSADEQPHIGNYRLLKTIGKGNFAKVKLARHILTGKEVAVKII-----DKTQLNSSS 56
Query: 225 LEKQFNREVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLP 284
L+K F REV ++ L++PN++K + ++ EY S G + YL + H +
Sbjct: 57 LQKLF-REVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYL--VAHGRMKEK 113
Query: 285 KLIAIALDIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIACEEVYCDALSDDP 344
+ A I ++Y H + ++HRDLK EN+L+D + ++KIADFG + E + + L
Sbjct: 114 EARAKFRQIVSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFC 173
Query: 345 GTYRWMAPEMIKHKSY-GRKVDVYSFGLILWEMVAGTIPYEEMNPIQAAFAVVNKNLRPA 403
G+ + APE+ + K Y G +VDV+S G+IL+ +V+G++P++ N + V+ R
Sbjct: 174 GSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYR-- 231
Query: 404 IPGDCPPAMAALIEQCWSLQPDKRPEFWHIVK 435
IP L+++ L P KR I+K
Sbjct: 232 IPFYMSTDCENLLKKFLILNPSKRGTLEQIMK 263
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 116 bits (290), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 82/272 (30%), Positives = 141/272 (51%), Gaps = 12/272 (4%)
Query: 166 NAVDAADEHT-VDLSQLFLGLRFAHGAHSRLYHGIYKDEPVAVKIIRIPDDDENETLAAR 224
N+ +ADE + +L + + A +L I + VAVKII D+ + ++
Sbjct: 2 NSATSADEQPHIGNYRLLKTIGKGNFAKVKLARHILTGKEVAVKII-----DKTQLNSSS 56
Query: 225 LEKQFNREVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLP 284
L+K F REV ++ L++PN++K + ++ EY S G + YL + H +
Sbjct: 57 LQKLF-REVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYL--VAHGRMKEK 113
Query: 285 KLIAIALDIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIACEEVYCDALSDDP 344
+ A I ++Y H + ++HRDLK EN+L+D + ++KIADFG + E + + L
Sbjct: 114 EARAKFRQIVSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFC 173
Query: 345 GTYRWMAPEMIKHKSY-GRKVDVYSFGLILWEMVAGTIPYEEMNPIQAAFAVVNKNLRPA 403
G+ + APE+ + K Y G +VDV+S G+IL+ +V+G++P++ N + V+ R
Sbjct: 174 GSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYR-- 231
Query: 404 IPGDCPPAMAALIEQCWSLQPDKRPEFWHIVK 435
IP L+++ L P KR I+K
Sbjct: 232 IPFYMSTDCENLLKKFLILNPSKRGTLEQIMK 263
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 116 bits (290), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 81/272 (29%), Positives = 142/272 (52%), Gaps = 12/272 (4%)
Query: 166 NAVDAADEHT-VDLSQLFLGLRFAHGAHSRLYHGIYKDEPVAVKIIRIPDDDENETLAAR 224
N+ +ADE + +L + + A +L I + VAV+II D+ + ++
Sbjct: 2 NSATSADEQPHIGNYRLLKTIGKGNFAKVKLARHILTGKEVAVRII-----DKTQLNSSS 56
Query: 225 LEKQFNREVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLP 284
L+K F REV ++ L++PN++K + ++ EY S G + YL + H +
Sbjct: 57 LQKLF-REVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYL--VAHGRMKEK 113
Query: 285 KLIAIALDIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIACEEVYCDALSDDP 344
+ A I ++Y H + ++HRDLK EN+L+D + ++KIADFG + E + + L +
Sbjct: 114 EARAKFRQIVSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDEFC 173
Query: 345 GTYRWMAPEMIKHKSY-GRKVDVYSFGLILWEMVAGTIPYEEMNPIQAAFAVVNKNLRPA 403
G+ + APE+ + K Y G +VDV+S G+IL+ +V+G++P++ N + V+ R
Sbjct: 174 GSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYR-- 231
Query: 404 IPGDCPPAMAALIEQCWSLQPDKRPEFWHIVK 435
IP L+++ L P KR I+K
Sbjct: 232 IPFYMSTDCENLLKKFLILNPSKRGTLEQIMK 263
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 115 bits (289), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 72/274 (26%), Positives = 127/274 (46%), Gaps = 17/274 (6%)
Query: 175 TVDLSQLFLGLRFAHGAHSRLYHGIYKD-EPVAVKIIRIPDDDENETLAARLEKQFNREV 233
+D S+L G ++ G + + + VA+K IR A E+ F E
Sbjct: 3 VIDPSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIR---------EGAMSEEDFIEEA 53
Query: 234 ALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIALDI 293
++ +L +P +++ C + C++ E++ G L YL + + L+ + LD+
Sbjct: 54 EVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYL-RTQRGLFAAETLLGMCLDV 112
Query: 294 ARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIACEEVYCDALSDDPGT---YRWM 350
GM Y+ VIHRDL N L+ + +K++DFG+ V D + GT +W
Sbjct: 113 CEGMAYLEEASVIHRDLAARNCLVGENQVIKVSDFGMT-RFVLDDQYTSSTGTKFPVKWA 171
Query: 351 APEMIKHKSYGRKVDVYSFGLILWEMVA-GTIPYEEMNPIQAAFAVVNKNLRPAIPGDCP 409
+PE+ Y K DV+SFG+++WE+ + G IPYE + + ++ R P
Sbjct: 172 SPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVV-EDISTGFRLYKPRLAS 230
Query: 410 PAMAALIEQCWSLQPDKRPEFWHIVKVLEQFETS 443
+ ++ CW +P+ RP F +++ L S
Sbjct: 231 THVYQIMNHCWKERPEDRPAFSRLLRQLAAIAAS 264
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 115 bits (288), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 72/274 (26%), Positives = 128/274 (46%), Gaps = 17/274 (6%)
Query: 175 TVDLSQLFLGLRFAHGAHSRLYHGIYKD-EPVAVKIIRIPDDDENETLAARLEKQFNREV 233
+D S+L G ++ G + + + VA+K IR A E+ F E
Sbjct: 3 VIDPSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIR---------EGAMSEEDFIEEA 53
Query: 234 ALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIALDI 293
++ +L +P +++ C + C++ E++ G L YL + + L+ + LD+
Sbjct: 54 EVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYL-RTQRGLFAAETLLGMCLDV 112
Query: 294 ARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIACEEVYCDALSDDPGT---YRWM 350
GM Y+ VIHRDL N L+ + +K++DFG+ V D + GT +W
Sbjct: 113 CEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMT-RFVLDDQYTSSTGTKFPVKWA 171
Query: 351 APEMIKHKSYGRKVDVYSFGLILWEMVA-GTIPYEEMNPIQAAFAVVNKNLRPAIPGDCP 409
+PE+ Y K DV+SFG+++WE+ + G IPYE + + ++ R P
Sbjct: 172 SPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVV-EDISTGFRLYKPRLAS 230
Query: 410 PAMAALIEQCWSLQPDKRPEFWHIVKVLEQFETS 443
+ ++ CW +P+ RP F +++ L + S
Sbjct: 231 THVYQIMNHCWKERPEDRPAFSRLLRQLAEIAES 264
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 115 bits (288), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 77/263 (29%), Positives = 120/263 (45%), Gaps = 24/263 (9%)
Query: 186 RFAHGAHSRLYHGIYKDEPVAVKIIRIPDDDENETLAARLEKQFNREVALLSRLHNPNVI 245
RF L+ ++ AV I + D E L ++F E L +RL +PNV+
Sbjct: 21 RFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGP-----LREEFRHEAMLRARLQHPNVV 75
Query: 246 KFVAACKKPPVYCVITEYLSEGSLRAYL--------------HKLEHKTLPLPKLIAIAL 291
+ K +I Y S G L +L + L P + +
Sbjct: 76 CLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVA 135
Query: 292 DIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIACEEV---YCDALSDDPGTYR 348
IA GMEY+ S V+H+DL NVL+ + ++KI+D G+ E Y L + R
Sbjct: 136 QIAAGMEYLSSHHVVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLGNSLLPIR 195
Query: 349 WMAPEMIKHKSYGRKVDVYSFGLILWEMVA-GTIPYEEMNPIQAAFAVVNKNLRPAIPGD 407
WMAPE I + + D++S+G++LWE+ + G PY + + N+ + P P D
Sbjct: 196 WMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVVEMIRNRQVLPC-PDD 254
Query: 408 CPPAMAALIEQCWSLQPDKRPEF 430
CP + AL+ +CW+ P +RP F
Sbjct: 255 CPAWVYALMIECWNEFPSRRPRF 277
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 115 bits (288), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 72/274 (26%), Positives = 128/274 (46%), Gaps = 17/274 (6%)
Query: 175 TVDLSQLFLGLRFAHGAHSRLYHGIYKD-EPVAVKIIRIPDDDENETLAARLEKQFNREV 233
+D S+L G ++ G + + + VA+K IR A E+ F E
Sbjct: 6 VIDPSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIR---------EGAMSEEDFIEEA 56
Query: 234 ALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIALDI 293
++ +L +P +++ C + C++ E++ G L YL + + L+ + LD+
Sbjct: 57 EVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYL-RTQRGLFAAETLLGMCLDV 115
Query: 294 ARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIACEEVYCDALSDDPGT---YRWM 350
GM Y+ VIHRDL N L+ + +K++DFG+ V D + GT +W
Sbjct: 116 CEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMT-RFVLDDQYTSSTGTKFPVKWA 174
Query: 351 APEMIKHKSYGRKVDVYSFGLILWEMVA-GTIPYEEMNPIQAAFAVVNKNLRPAIPGDCP 409
+PE+ Y K DV+SFG+++WE+ + G IPYE + + ++ R P
Sbjct: 175 SPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVV-EDISTGFRLYKPRLAS 233
Query: 410 PAMAALIEQCWSLQPDKRPEFWHIVKVLEQFETS 443
+ ++ CW +P+ RP F +++ L + S
Sbjct: 234 THVYQIMNHCWRERPEDRPAFSRLLRQLAEIAES 267
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 115 bits (288), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 72/274 (26%), Positives = 128/274 (46%), Gaps = 17/274 (6%)
Query: 175 TVDLSQLFLGLRFAHGAHSRLYHGIYKD-EPVAVKIIRIPDDDENETLAARLEKQFNREV 233
+D S+L G ++ G + + + VA+K IR A E+ F E
Sbjct: 1 VIDPSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIR---------EGAMSEEDFIEEA 51
Query: 234 ALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIALDI 293
++ +L +P +++ C + C++ E++ G L YL + + L+ + LD+
Sbjct: 52 EVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYL-RTQRGLFAAETLLGMCLDV 110
Query: 294 ARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIACEEVYCDALSDDPGT---YRWM 350
GM Y+ VIHRDL N L+ + +K++DFG+ V D + GT +W
Sbjct: 111 CEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMT-RFVLDDQYTSSTGTKFPVKWA 169
Query: 351 APEMIKHKSYGRKVDVYSFGLILWEMVA-GTIPYEEMNPIQAAFAVVNKNLRPAIPGDCP 409
+PE+ Y K DV+SFG+++WE+ + G IPYE + + ++ R P
Sbjct: 170 SPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVV-EDISTGFRLYKPRLAS 228
Query: 410 PAMAALIEQCWSLQPDKRPEFWHIVKVLEQFETS 443
+ ++ CW +P+ RP F +++ L + S
Sbjct: 229 THVYQIMNHCWKERPEDRPAFSRLLRQLAEIAES 262
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 115 bits (288), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 76/261 (29%), Positives = 129/261 (49%), Gaps = 34/261 (13%)
Query: 187 FAHGAHSRLYHGIYKDE------PVAVKIIRIPDDDENETLAARLEKQFNREVALLSRLH 240
GA +Y GI+ E PVA+KI+ NET + +F E +++ +
Sbjct: 46 LGSGAFGTVYKGIWVPEGETVKIPVAIKIL-------NETTGPKANVEFMDEALIMASMD 98
Query: 241 NPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHK-TLPLPKLIAIALDIARGMEY 299
+P++++ + C P + ++T+ + G L Y+H EHK + L+ + IA+GM Y
Sbjct: 99 HPHLVRLLGVCLSPTIQ-LVTQLMPHGCLLEYVH--EHKDNIGSQLLLNWCVQIAKGMMY 155
Query: 300 IHSQGVIHRDLKPENVLIDQEFHLKIADFGIACEEVYCDALSDDPGTY---------RWM 350
+ + ++HRDL NVL+ H+KI DFG+A L D Y +WM
Sbjct: 156 LEERRLVHRDLAARNVLVKSPNHVKITDFGLA------RLLEGDEKEYNADGGKMPIKWM 209
Query: 351 APEMIKHKSYGRKVDVYSFGLILWE-MVAGTIPYEEMNPIQAAFAVVNKNLRPAIPGDCP 409
A E I ++ + + DV+S+G+ +WE M G PY+ + P + ++ K R P C
Sbjct: 210 ALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGI-PTREIPDLLEKGERLPQPPICT 268
Query: 410 PAMAALIEQCWSLQPDKRPEF 430
+ ++ +CW + D RP+F
Sbjct: 269 IDVYMVMVKCWMIDADSRPKF 289
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 115 bits (287), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 81/272 (29%), Positives = 141/272 (51%), Gaps = 12/272 (4%)
Query: 166 NAVDAADEHT-VDLSQLFLGLRFAHGAHSRLYHGIYKDEPVAVKIIRIPDDDENETLAAR 224
N+ +ADE + +L + + A +L I + VAV+II D+ + ++
Sbjct: 2 NSATSADEQPHIGNYRLLKTIGKGNFAKVKLARHILTGKEVAVRII-----DKTQLNSSS 56
Query: 225 LEKQFNREVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLP 284
L+K F REV ++ L++PN++K + ++ EY S G + YL + H +
Sbjct: 57 LQKLF-REVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYL--VAHGRMKEK 113
Query: 285 KLIAIALDIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIACEEVYCDALSDDP 344
+ A I ++Y H + ++HRDLK EN+L+D + ++KIADFG + E + + L
Sbjct: 114 EARAKFRQIVSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFC 173
Query: 345 GTYRWMAPEMIKHKSY-GRKVDVYSFGLILWEMVAGTIPYEEMNPIQAAFAVVNKNLRPA 403
G+ + APE+ + K Y G +VDV+S G+IL+ +V+G++P++ N + V+ R
Sbjct: 174 GSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYR-- 231
Query: 404 IPGDCPPAMAALIEQCWSLQPDKRPEFWHIVK 435
IP L+++ L P KR I+K
Sbjct: 232 IPFYMSTDCENLLKKFLILNPSKRGTLEQIMK 263
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 115 bits (287), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 77/263 (29%), Positives = 120/263 (45%), Gaps = 24/263 (9%)
Query: 186 RFAHGAHSRLYHGIYKDEPVAVKIIRIPDDDENETLAARLEKQFNREVALLSRLHNPNVI 245
RF L+ ++ AV I + D E L ++F E L +RL +PNV+
Sbjct: 38 RFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGP-----LREEFRHEAMLRARLQHPNVV 92
Query: 246 KFVAACKKPPVYCVITEYLSEGSLRAYL--------------HKLEHKTLPLPKLIAIAL 291
+ K +I Y S G L +L + L P + +
Sbjct: 93 CLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVA 152
Query: 292 DIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIACEEV---YCDALSDDPGTYR 348
IA GMEY+ S V+H+DL NVL+ + ++KI+D G+ E Y L + R
Sbjct: 153 QIAAGMEYLSSHHVVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLGNSLLPIR 212
Query: 349 WMAPEMIKHKSYGRKVDVYSFGLILWEMVA-GTIPYEEMNPIQAAFAVVNKNLRPAIPGD 407
WMAPE I + + D++S+G++LWE+ + G PY + + N+ + P P D
Sbjct: 213 WMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVVEMIRNRQVLPC-PDD 271
Query: 408 CPPAMAALIEQCWSLQPDKRPEF 430
CP + AL+ +CW+ P +RP F
Sbjct: 272 CPAWVYALMIECWNEFPSRRPRF 294
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 115 bits (287), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 82/272 (30%), Positives = 140/272 (51%), Gaps = 12/272 (4%)
Query: 166 NAVDAADEHT-VDLSQLFLGLRFAHGAHSRLYHGIYKDEPVAVKIIRIPDDDENETLAAR 224
N+ +ADE + +L + + A +L I + VAVKII D+ + ++
Sbjct: 2 NSATSADEQPHIGNYRLLKTIGKGNFAKVKLARHILTGKEVAVKII-----DKTQLNSSS 56
Query: 225 LEKQFNREVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLP 284
L+K F REV ++ L++PN++K + ++ EY S G + YL + H +
Sbjct: 57 LQKLF-REVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYL--VAHGRMKEK 113
Query: 285 KLIAIALDIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIACEEVYCDALSDDP 344
+ A I ++Y H + ++HRDLK EN+L+D + ++KIADFG + E + + L
Sbjct: 114 EARAKFRQIVSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDAFC 173
Query: 345 GTYRWMAPEMIKHKSY-GRKVDVYSFGLILWEMVAGTIPYEEMNPIQAAFAVVNKNLRPA 403
G + APE+ + K Y G +VDV+S G+IL+ +V+G++P++ N + V+ R
Sbjct: 174 GAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYR-- 231
Query: 404 IPGDCPPAMAALIEQCWSLQPDKRPEFWHIVK 435
IP L+++ L P KR I+K
Sbjct: 232 IPFYMSTDCENLLKKFLILNPSKRGTLEQIMK 263
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 115 bits (287), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 76/261 (29%), Positives = 129/261 (49%), Gaps = 34/261 (13%)
Query: 187 FAHGAHSRLYHGIYKDE------PVAVKIIRIPDDDENETLAARLEKQFNREVALLSRLH 240
GA +Y GI+ E PVA+KI+ NET + +F E +++ +
Sbjct: 23 LGSGAFGTVYKGIWVPEGETVKIPVAIKIL-------NETTGPKANVEFMDEALIMASMD 75
Query: 241 NPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHK-TLPLPKLIAIALDIARGMEY 299
+P++++ + C P + ++T+ + G L Y+H EHK + L+ + IA+GM Y
Sbjct: 76 HPHLVRLLGVCLSPTIQ-LVTQLMPHGCLLEYVH--EHKDNIGSQLLLNWCVQIAKGMMY 132
Query: 300 IHSQGVIHRDLKPENVLIDQEFHLKIADFGIACEEVYCDALSDDPGTY---------RWM 350
+ + ++HRDL NVL+ H+KI DFG+A L D Y +WM
Sbjct: 133 LEERRLVHRDLAARNVLVKSPNHVKITDFGLA------RLLEGDEKEYNADGGKMPIKWM 186
Query: 351 APEMIKHKSYGRKVDVYSFGLILWE-MVAGTIPYEEMNPIQAAFAVVNKNLRPAIPGDCP 409
A E I ++ + + DV+S+G+ +WE M G PY+ + P + ++ K R P C
Sbjct: 187 ALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGI-PTREIPDLLEKGERLPQPPICT 245
Query: 410 PAMAALIEQCWSLQPDKRPEF 430
+ ++ +CW + D RP+F
Sbjct: 246 IDVYMVMVKCWMIDADSRPKF 266
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 115 bits (287), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 79/244 (32%), Positives = 124/244 (50%), Gaps = 23/244 (9%)
Query: 227 KQFNREVALLSRL-HNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHK---LE----- 277
+ F E+ +L +L H+PN+I + AC+ + EY G+L +L K LE
Sbjct: 67 RDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAF 126
Query: 278 ------HKTLPLPKLIAIALDIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIA 331
TL +L+ A D+ARGM+Y+ + IHR+L N+L+ + + KIADFG++
Sbjct: 127 AIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRNLAARNILVGENYVAKIADFGLS 186
Query: 332 -CEEVYC-DALSDDPGTYRWMAPEMIKHKSYGRKVDVYSFGLILWEMVA-GTIPYEEMNP 388
+EVY + P RWMA E + + Y DV+S+G++LWE+V+ G PY M
Sbjct: 187 RGQEVYVKKTMGRLP--VRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTC 244
Query: 389 IQAAFAVVNKNLRPAIPGDCPPAMAALIEQCWSLQPDKRPEFWHIVKVLEQF--ETSLAC 446
+ + + + R P +C + L+ QCW +P +RP F I+ L + E
Sbjct: 245 AE-LYEKLPQGYRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLEERKTYV 303
Query: 447 NGTL 450
N TL
Sbjct: 304 NTTL 307
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 114 bits (286), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 82/299 (27%), Positives = 133/299 (44%), Gaps = 34/299 (11%)
Query: 160 HGGVRVNAVDAADEHTVDLSQLFLGLRFAHGAHSRLYHG-IYKDEPVAVKIIRIPDDDEN 218
H G+ V + D + L GA +++ Y P K++ ++
Sbjct: 4 HSGIHVQHIKRRD--------IVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKD 55
Query: 219 ETLAARLEKQFNREVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLH---- 274
TLAAR K F RE LL+ L + +++KF C ++ EY+ G L +L
Sbjct: 56 PTLAAR--KDFQREAELLTNLQHEHIVKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGP 113
Query: 275 ----------KLEHKTLPLPKLIAIALDIARGMEYIHSQGVIHRDLKPENVLIDQEFHLK 324
+ L L +++ IA IA GM Y+ SQ +HRDL N L+ +K
Sbjct: 114 DAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQHFVHRDLATRNCLVGANLLVK 173
Query: 325 IADFGIACEEVYCDALSDDPGTY---RWMAPEMIKHKSYGRKVDVYSFGLILWEMVA-GT 380
I DFG++ + D T RWM PE I ++ + + DV+SFG+ILWE+ G
Sbjct: 174 IGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGK 233
Query: 381 IPYEEMNPIQAAFAVVNKNL--RPAIPGDCPPAMAALIEQCWSLQPDKRPEFWHIVKVL 437
P+ +++ + + + RP + CP + ++ CW +P +R I K+L
Sbjct: 234 QPWFQLSNTEVIECITQGRVLERPRV---CPKEVYDVMLGCWQREPQQRLNIKEIYKIL 289
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 66/263 (25%), Positives = 132/263 (50%), Gaps = 12/263 (4%)
Query: 173 EHTVDLSQLFLGLRFAHGAHSRLYHGIYK--DEPVAVKIIRIPDDDENETLAARLEKQFN 230
++ + ++ LG G ++ GIY + P I+ + ++++ ++F
Sbjct: 4 DYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSV----REKFL 59
Query: 231 REVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIA 290
+E + + +P+++K + + PV+ +I E + G LR++L ++ +L L LI A
Sbjct: 60 QEALTMRQFDHPHIVKLIGVITENPVW-IIMELCTLGELRSFL-QVRKFSLDLASLILYA 117
Query: 291 LDIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIA--CEEVYCDALSDDPGTYR 348
++ + Y+ S+ +HRD+ NVL+ +K+ DFG++ E+ S +
Sbjct: 118 YQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTXXKASKGKLPIK 177
Query: 349 WMAPEMIKHKSYGRKVDVYSFGLILWEMVA-GTIPYEEMNPIQAAFAVVNKNLRPAIPGD 407
WMAPE I + + DV+ FG+ +WE++ G P++ + + N P +P +
Sbjct: 178 WMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLP-MPPN 236
Query: 408 CPPAMAALIEQCWSLQPDKRPEF 430
CPP + +L+ +CW+ P +RP F
Sbjct: 237 CPPTLYSLMTKCWAYDPSRRPRF 259
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 69/274 (25%), Positives = 134/274 (48%), Gaps = 19/274 (6%)
Query: 181 LFLGLRFAHGAHSRLYHGIY----KDEPVAVKIIRIPDDDENETLAARLEKQFNREVALL 236
L + G + G+Y K VA+K+++ + + ++ RE ++
Sbjct: 12 LIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADT-------EEMMREAQIM 64
Query: 237 SRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIALDIARG 296
+L NP +++ + C+ + V+ E G L +L + + +P+ + + ++ G
Sbjct: 65 HQLDNPYIVRLIGVCQAEALMLVM-EMAGGGPLHKFLVG-KREEIPVSNVAELLHQVSMG 122
Query: 297 MEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIA----CEEVYCDALSDDPGTYRWMAP 352
M+Y+ + +HRDL NVL+ + KI+DFG++ ++ Y A S +W AP
Sbjct: 123 MKYLEEKNFVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAP 182
Query: 353 EMIKHKSYGRKVDVYSFGLILWEMVA-GTIPYEEMNPIQAAFAVVNKNLRPAIPGDCPPA 411
E I + + + DV+S+G+ +WE ++ G PY++M + A + + R P +CPP
Sbjct: 183 ECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPE-VMAFIEQGKRMECPPECPPE 241
Query: 412 MAALIEQCWSLQPDKRPEFWHIVKVLEQFETSLA 445
+ AL+ CW + + RP+F + + + SLA
Sbjct: 242 LYALMSDCWIYKWEDRPDFLTVEQRMRACYYSLA 275
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 77/246 (31%), Positives = 130/246 (52%), Gaps = 11/246 (4%)
Query: 191 AHSRLYHGIYKDEPVAVKIIRIPDDDENETLAARLEKQFNREVALLSRLHNPNVIKFVAA 250
A +L I + VAVKII D+ + ++ L+K F REV ++ L++PN++K
Sbjct: 21 AKVKLARHILTGKEVAVKII-----DKTQLNSSSLQKLF-REVRIMKVLNHPNIVKLFEV 74
Query: 251 CKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIALDIARGMEYIHSQGVIHRDL 310
+ ++ EY S G + YL + H + + A I ++Y H + ++HRDL
Sbjct: 75 IETEKTLYLVMEYASGGEVFDYL--VAHGWMKEKEARAKFRQIVSAVQYCHQKFIVHRDL 132
Query: 311 KPENVLIDQEFHLKIADFGIACEEVYCDALSDDPGTYRWMAPEMIKHKSY-GRKVDVYSF 369
K EN+L+D + ++KIADFG + E + + L G+ + APE+ + K Y G +VDV+S
Sbjct: 133 KAENLLLDADMNIKIADFGFSNEFTFGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSL 192
Query: 370 GLILWEMVAGTIPYEEMNPIQAAFAVVNKNLRPAIPGDCPPAMAALIEQCWSLQPDKRPE 429
G+IL+ +V+G++P++ N + V+ R IP L+++ L P KR
Sbjct: 193 GVILYTLVSGSLPFDGQNLKELRERVLRGKYR--IPFYMSTDCENLLKKFLILNPSKRGT 250
Query: 430 FWHIVK 435
I+K
Sbjct: 251 LEQIMK 256
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 114 bits (284), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 66/263 (25%), Positives = 132/263 (50%), Gaps = 12/263 (4%)
Query: 173 EHTVDLSQLFLGLRFAHGAHSRLYHGIYK--DEPVAVKIIRIPDDDENETLAARLEKQFN 230
++ + ++ LG G ++ GIY + P I+ + ++++ ++F
Sbjct: 4 DYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSV----REKFL 59
Query: 231 REVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIA 290
+E + + +P+++K + + PV+ +I E + G LR++L ++ +L L LI A
Sbjct: 60 QEALTMRQFDHPHIVKLIGVITENPVW-IIMELCTLGELRSFL-QVRKYSLDLASLILYA 117
Query: 291 LDIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIA--CEEVYCDALSDDPGTYR 348
++ + Y+ S+ +HRD+ NVL+ +K+ DFG++ E+ S +
Sbjct: 118 YQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIK 177
Query: 349 WMAPEMIKHKSYGRKVDVYSFGLILWEMVA-GTIPYEEMNPIQAAFAVVNKNLRPAIPGD 407
WMAPE I + + DV+ FG+ +WE++ G P++ + + N P +P +
Sbjct: 178 WMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLP-MPPN 236
Query: 408 CPPAMAALIEQCWSLQPDKRPEF 430
CPP + +L+ +CW+ P +RP F
Sbjct: 237 CPPTLYSLMTKCWAYDPSRRPRF 259
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 66/263 (25%), Positives = 132/263 (50%), Gaps = 12/263 (4%)
Query: 173 EHTVDLSQLFLGLRFAHGAHSRLYHGIYK--DEPVAVKIIRIPDDDENETLAARLEKQFN 230
++ + ++ LG G ++ GIY + P I+ + ++++ ++F
Sbjct: 9 DYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSV----REKFL 64
Query: 231 REVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIA 290
+E + + +P+++K + + PV+ +I E + G LR++L ++ +L L LI A
Sbjct: 65 QEALTMRQFDHPHIVKLIGVITENPVW-IIMELCTLGELRSFL-QVRKYSLDLASLILYA 122
Query: 291 LDIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIA--CEEVYCDALSDDPGTYR 348
++ + Y+ S+ +HRD+ NVL+ +K+ DFG++ E+ S +
Sbjct: 123 YQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIK 182
Query: 349 WMAPEMIKHKSYGRKVDVYSFGLILWEMVA-GTIPYEEMNPIQAAFAVVNKNLRPAIPGD 407
WMAPE I + + DV+ FG+ +WE++ G P++ + + N P +P +
Sbjct: 183 WMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLP-MPPN 241
Query: 408 CPPAMAALIEQCWSLQPDKRPEF 430
CPP + +L+ +CW+ P +RP F
Sbjct: 242 CPPTLYSLMTKCWAYDPSRRPRF 264
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 66/263 (25%), Positives = 132/263 (50%), Gaps = 12/263 (4%)
Query: 173 EHTVDLSQLFLGLRFAHGAHSRLYHGIYK--DEPVAVKIIRIPDDDENETLAARLEKQFN 230
++ + ++ LG G ++ GIY + P I+ + ++++ ++F
Sbjct: 6 DYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSV----REKFL 61
Query: 231 REVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIA 290
+E + + +P+++K + + PV+ +I E + G LR++L ++ +L L LI A
Sbjct: 62 QEALTMRQFDHPHIVKLIGVITENPVW-IIMELCTLGELRSFL-QVRKYSLDLASLILYA 119
Query: 291 LDIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIA--CEEVYCDALSDDPGTYR 348
++ + Y+ S+ +HRD+ NVL+ +K+ DFG++ E+ S +
Sbjct: 120 YQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIK 179
Query: 349 WMAPEMIKHKSYGRKVDVYSFGLILWEMVA-GTIPYEEMNPIQAAFAVVNKNLRPAIPGD 407
WMAPE I + + DV+ FG+ +WE++ G P++ + + N P +P +
Sbjct: 180 WMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLP-MPPN 238
Query: 408 CPPAMAALIEQCWSLQPDKRPEF 430
CPP + +L+ +CW+ P +RP F
Sbjct: 239 CPPTLYSLMTKCWAYDPSRRPRF 261
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 66/263 (25%), Positives = 132/263 (50%), Gaps = 12/263 (4%)
Query: 173 EHTVDLSQLFLGLRFAHGAHSRLYHGIYK--DEPVAVKIIRIPDDDENETLAARLEKQFN 230
++ + ++ LG G ++ GIY + P I+ + ++++ ++F
Sbjct: 4 DYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSV----REKFL 59
Query: 231 REVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIA 290
+E + + +P+++K + + PV+ +I E + G LR++L ++ +L L LI A
Sbjct: 60 QEALTMRQFDHPHIVKLIGVITENPVW-IIMELCTLGELRSFL-QVRKYSLDLASLILYA 117
Query: 291 LDIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIA--CEEVYCDALSDDPGTYR 348
++ + Y+ S+ +HRD+ NVL+ +K+ DFG++ E+ S +
Sbjct: 118 YQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIK 177
Query: 349 WMAPEMIKHKSYGRKVDVYSFGLILWEMVA-GTIPYEEMNPIQAAFAVVNKNLRPAIPGD 407
WMAPE I + + DV+ FG+ +WE++ G P++ + + N P +P +
Sbjct: 178 WMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLP-MPPN 236
Query: 408 CPPAMAALIEQCWSLQPDKRPEF 430
CPP + +L+ +CW+ P +RP F
Sbjct: 237 CPPTLYSLMTKCWAYDPSRRPRF 259
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 69/266 (25%), Positives = 132/266 (49%), Gaps = 18/266 (6%)
Query: 173 EHTVDLSQLFLGLRFAHGAHSRLYHGIYK--DEP---VAVKIIRIPDDDENETLAARLEK 227
++ + ++ LG G ++ GIY + P VA+K + D + +
Sbjct: 7 DYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDS-------VRE 59
Query: 228 QFNREVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLI 287
+F +E + + +P+++K + + PV+ +I E + G LR++L ++ +L L LI
Sbjct: 60 KFLQEALTMRQFDHPHIVKLIGVITENPVW-IIMELCTLGELRSFL-QVRKYSLDLASLI 117
Query: 288 AIALDIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIA--CEEVYCDALSDDPG 345
A ++ + Y+ S+ +HRD+ NVL+ +K+ DFG++ E+ S
Sbjct: 118 LYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKL 177
Query: 346 TYRWMAPEMIKHKSYGRKVDVYSFGLILWEMVA-GTIPYEEMNPIQAAFAVVNKNLRPAI 404
+WMAPE I + + DV+ FG+ +WE++ G P++ + + N P +
Sbjct: 178 PIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLP-M 236
Query: 405 PGDCPPAMAALIEQCWSLQPDKRPEF 430
P +CPP + +L+ +CW+ P +RP F
Sbjct: 237 PPNCPPTLYSLMTKCWAYDPSRRPRF 262
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 66/263 (25%), Positives = 132/263 (50%), Gaps = 12/263 (4%)
Query: 173 EHTVDLSQLFLGLRFAHGAHSRLYHGIYK--DEPVAVKIIRIPDDDENETLAARLEKQFN 230
++ + ++ LG G ++ GIY + P I+ + ++++ ++F
Sbjct: 32 DYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSV----REKFL 87
Query: 231 REVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIA 290
+E + + +P+++K + + PV+ +I E + G LR++L ++ +L L LI A
Sbjct: 88 QEALTMRQFDHPHIVKLIGVITENPVW-IIMELCTLGELRSFL-QVRKYSLDLASLILYA 145
Query: 291 LDIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIA--CEEVYCDALSDDPGTYR 348
++ + Y+ S+ +HRD+ NVL+ +K+ DFG++ E+ S +
Sbjct: 146 YQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIK 205
Query: 349 WMAPEMIKHKSYGRKVDVYSFGLILWEMVA-GTIPYEEMNPIQAAFAVVNKNLRPAIPGD 407
WMAPE I + + DV+ FG+ +WE++ G P++ + + N P +P +
Sbjct: 206 WMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLP-MPPN 264
Query: 408 CPPAMAALIEQCWSLQPDKRPEF 430
CPP + +L+ +CW+ P +RP F
Sbjct: 265 CPPTLYSLMTKCWAYDPSRRPRF 287
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 83/300 (27%), Positives = 140/300 (46%), Gaps = 27/300 (9%)
Query: 151 ESAWTKYFDHGGVRVNAVDAADEHTVDLSQLFLGLR--FAHGAHSRLYHGIYKDEP---- 204
+ A T + D + V A + S L + G +YHG D
Sbjct: 59 QGANTVHIDLSALNPELVQAVQHVVIGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKI 118
Query: 205 -VAVKII-RIPDDDENETLAARLEKQFNREVALLSRLHNPNVIKFVAAC-KKPPVYCVIT 261
AVK + RI D E QF E ++ +PNV+ + C + V+
Sbjct: 119 HCAVKSLNRITDIGE--------VSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVL 170
Query: 262 EYLSEGSLRAYLHKLEHKTLPLPKLIAIALDIARGMEYIHSQGVIHRDLKPENVLIDQEF 321
Y+ G LR ++ H + LI L +A+GM+++ S+ +HRDL N ++D++F
Sbjct: 171 PYMKHGDLRNFIRNETHNP-TVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLDEKF 229
Query: 322 HLKIADFGIACEEVY---CDALSDDPGT---YRWMAPEMIKHKSYGRKVDVYSFGLILWE 375
+K+ADFG+A ++Y D++ + G +WMA E ++ + + K DV+SFG++LWE
Sbjct: 230 TVKVADFGLA-RDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWE 288
Query: 376 -MVAGTIPYEEMNPIQAAFAVVNKNLRPAIPGDCPPAMAALIEQCWSLQPDKRPEFWHIV 434
M G PY ++N ++ + R P CP + ++ +CW + + RP F +V
Sbjct: 289 LMTRGAPPYPDVNTFDITVYLL-QGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELV 347
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 113 bits (282), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 66/263 (25%), Positives = 132/263 (50%), Gaps = 12/263 (4%)
Query: 173 EHTVDLSQLFLGLRFAHGAHSRLYHGIYK--DEPVAVKIIRIPDDDENETLAARLEKQFN 230
++ + ++ LG G ++ GIY + P I+ + ++++ ++F
Sbjct: 1 DYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSV----REKFL 56
Query: 231 REVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIA 290
+E + + +P+++K + + PV+ +I E + G LR++L ++ +L L LI A
Sbjct: 57 QEALTMRQFDHPHIVKLIGVITENPVW-IIMELCTLGELRSFL-QVRKYSLDLASLILYA 114
Query: 291 LDIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIA--CEEVYCDALSDDPGTYR 348
++ + Y+ S+ +HRD+ NVL+ +K+ DFG++ E+ S +
Sbjct: 115 YQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIK 174
Query: 349 WMAPEMIKHKSYGRKVDVYSFGLILWEMVA-GTIPYEEMNPIQAAFAVVNKNLRPAIPGD 407
WMAPE I + + DV+ FG+ +WE++ G P++ + + N P +P +
Sbjct: 175 WMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLP-MPPN 233
Query: 408 CPPAMAALIEQCWSLQPDKRPEF 430
CPP + +L+ +CW+ P +RP F
Sbjct: 234 CPPTLYSLMTKCWAYDPSRRPRF 256
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 113 bits (282), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 77/272 (28%), Positives = 131/272 (48%), Gaps = 15/272 (5%)
Query: 168 VDAADEHTVDLSQLFLGL-RFAHGAHSRLYHGI--YKDEPVAVKIIRIPDDDENETLAAR 224
V + D +LF L R G+ ++ GI + VA+KII + A
Sbjct: 11 VPGMQNNIADPEELFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDL-------EEAED 63
Query: 225 LEKQFNREVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLP 284
+ +E+ +LS+ + V K+ + K +I EYL GS L +
Sbjct: 64 EIEDIQQEITVLSQCDSSYVTKYYGSYLKGSKLWIIMEYLGGGSALDLLRAGPFDEFQIA 123
Query: 285 KLIAIALDIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIACEEVYCDALSDD- 343
++ +I +G++Y+HS+ IHRD+K NVL+ ++ +K+ADFG+A + +
Sbjct: 124 TMLK---EILKGLDYLHSEKKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNTF 180
Query: 344 PGTYRWMAPEMIKHKSYGRKVDVYSFGLILWEMVAGTIPYEEMNPIQAAFAVVNKNLRPA 403
GT WMAPE+I+ +Y K D++S G+ E+ G P +M+P++ F ++ KN P
Sbjct: 181 VGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPPNSDMHPMRVLF-LIPKNNPPT 239
Query: 404 IPGDCPPAMAALIEQCWSLQPDKRPEFWHIVK 435
+ GD + I+ C + P RP ++K
Sbjct: 240 LVGDFTKSFKEFIDACLNKDPSFRPTAKELLK 271
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 113 bits (282), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 70/274 (25%), Positives = 128/274 (46%), Gaps = 17/274 (6%)
Query: 175 TVDLSQLFLGLRFAHGAHSRLYHGIYKD-EPVAVKIIRIPDDDENETLAARLEKQFNREV 233
+D S+L G ++ G + + + VA+K I+ E++ F E
Sbjct: 23 VIDPSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIKEGSMSEDD---------FIEEA 73
Query: 234 ALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIALDI 293
++ +L +P +++ C + C++ E++ G L YL + + L+ + LD+
Sbjct: 74 EVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYL-RTQRGLFAAETLLGMCLDV 132
Query: 294 ARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIACEEVYCDALSDDPGT---YRWM 350
GM Y+ VIHRDL N L+ + +K++DFG+ V D + GT +W
Sbjct: 133 CEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMT-RFVLDDQYTSSTGTKFPVKWA 191
Query: 351 APEMIKHKSYGRKVDVYSFGLILWEMVA-GTIPYEEMNPIQAAFAVVNKNLRPAIPGDCP 409
+PE+ Y K DV+SFG+++WE+ + G IPYE + + ++ R P
Sbjct: 192 SPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVV-EDISTGFRLYKPRLAS 250
Query: 410 PAMAALIEQCWSLQPDKRPEFWHIVKVLEQFETS 443
+ ++ CW +P+ RP F +++ L + S
Sbjct: 251 THVYQIMNHCWKERPEDRPAFSRLLRQLAEIAES 284
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 113 bits (282), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 68/274 (24%), Positives = 134/274 (48%), Gaps = 19/274 (6%)
Query: 181 LFLGLRFAHGAHSRLYHGIY----KDEPVAVKIIRIPDDDENETLAARLEKQFNREVALL 236
L + G + G+Y K VA+K+++ + + ++ RE ++
Sbjct: 338 LIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADT-------EEMMREAQIM 390
Query: 237 SRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIALDIARG 296
+L NP +++ + C+ + V+ E G L +L + + +P+ + + ++ G
Sbjct: 391 HQLDNPYIVRLIGVCQAEALMLVM-EMAGGGPLHKFLVG-KREEIPVSNVAELLHQVSMG 448
Query: 297 MEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIA----CEEVYCDALSDDPGTYRWMAP 352
M+Y+ + +HR+L NVL+ + KI+DFG++ ++ Y A S +W AP
Sbjct: 449 MKYLEEKNFVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAP 508
Query: 353 EMIKHKSYGRKVDVYSFGLILWEMVA-GTIPYEEMNPIQAAFAVVNKNLRPAIPGDCPPA 411
E I + + + DV+S+G+ +WE ++ G PY++M + A + + R P +CPP
Sbjct: 509 ECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPE-VMAFIEQGKRMECPPECPPE 567
Query: 412 MAALIEQCWSLQPDKRPEFWHIVKVLEQFETSLA 445
+ AL+ CW + + RP+F + + + SLA
Sbjct: 568 LYALMSDCWIYKWEDRPDFLTVEQRMRACYYSLA 601
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 112 bits (281), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 66/263 (25%), Positives = 132/263 (50%), Gaps = 12/263 (4%)
Query: 173 EHTVDLSQLFLGLRFAHGAHSRLYHGIYK--DEPVAVKIIRIPDDDENETLAARLEKQFN 230
++ + ++ LG G ++ GIY + P I+ + ++++ ++F
Sbjct: 4 DYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSV----REKFL 59
Query: 231 REVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIA 290
+E + + +P+++K + + PV+ +I E + G LR++L ++ +L L LI A
Sbjct: 60 QEALTMRQFDHPHIVKLIGVITENPVW-IIMELCTLGELRSFL-QVRKFSLDLASLILYA 117
Query: 291 LDIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIA--CEEVYCDALSDDPGTYR 348
++ + Y+ S+ +HRD+ NVL+ +K+ DFG++ E+ S +
Sbjct: 118 YQLSTALAYLESKRFVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGKLPIK 177
Query: 349 WMAPEMIKHKSYGRKVDVYSFGLILWEMVA-GTIPYEEMNPIQAAFAVVNKNLRPAIPGD 407
WMAPE I + + DV+ FG+ +WE++ G P++ + + N P +P +
Sbjct: 178 WMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLP-MPPN 236
Query: 408 CPPAMAALIEQCWSLQPDKRPEF 430
CPP + +L+ +CW+ P +RP F
Sbjct: 237 CPPTLYSLMTKCWAYDPSRRPRF 259
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 112 bits (281), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 66/263 (25%), Positives = 132/263 (50%), Gaps = 12/263 (4%)
Query: 173 EHTVDLSQLFLGLRFAHGAHSRLYHGIYK--DEPVAVKIIRIPDDDENETLAARLEKQFN 230
++ + ++ LG G ++ GIY + P I+ + ++++ ++F
Sbjct: 384 DYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSV----REKFL 439
Query: 231 REVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIA 290
+E + + +P+++K + + PV+ +I E + G LR++L ++ +L L LI A
Sbjct: 440 QEALTMRQFDHPHIVKLIGVITENPVW-IIMELCTLGELRSFL-QVRKFSLDLASLILYA 497
Query: 291 LDIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIA--CEEVYCDALSDDPGTYR 348
++ + Y+ S+ +HRD+ NVL+ +K+ DFG++ E+ S +
Sbjct: 498 YQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIK 557
Query: 349 WMAPEMIKHKSYGRKVDVYSFGLILWEMVA-GTIPYEEMNPIQAAFAVVNKNLRPAIPGD 407
WMAPE I + + DV+ FG+ +WE++ G P++ + + N P +P +
Sbjct: 558 WMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLP-MPPN 616
Query: 408 CPPAMAALIEQCWSLQPDKRPEF 430
CPP + +L+ +CW+ P +RP F
Sbjct: 617 CPPTLYSLMTKCWAYDPSRRPRF 639
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 112 bits (281), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 76/259 (29%), Positives = 128/259 (49%), Gaps = 25/259 (9%)
Query: 190 GAHSRLYHGIYKDEP-----VAVKII-RIPDDDENETLAARLEKQFNREVALLSRLHNPN 243
G +YHG D AVK + RI D E QF E ++ +PN
Sbjct: 42 GHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGE--------VSQFLTEGIIMKDFSHPN 93
Query: 244 VIKFVAAC-KKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIALDIARGMEYIHS 302
V+ + C + V+ Y+ G LR ++ H + LI L +A+GM+++ S
Sbjct: 94 VLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNP-TVKDLIGFGLQVAKGMKFLAS 152
Query: 303 QGVIHRDLKPENVLIDQEFHLKIADFGIACEEVY---CDALSDDPGT---YRWMAPEMIK 356
+ +HRDL N ++D++F +K+ADFG+A ++Y D++ + G +WMA E ++
Sbjct: 153 KKFVHRDLAARNCMLDEKFTVKVADFGLA-RDMYDKEFDSVHNKTGAKLPVKWMALESLQ 211
Query: 357 HKSYGRKVDVYSFGLILWE-MVAGTIPYEEMNPIQAAFAVVNKNLRPAIPGDCPPAMAAL 415
+ + K DV+SFG++LWE M G PY ++N ++ + R P CP + +
Sbjct: 212 TQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLL-QGRRLLQPEYCPDPLYEV 270
Query: 416 IEQCWSLQPDKRPEFWHIV 434
+ +CW + + RP F +V
Sbjct: 271 MLKCWHPKAEMRPSFSELV 289
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 112 bits (281), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 76/259 (29%), Positives = 128/259 (49%), Gaps = 25/259 (9%)
Query: 190 GAHSRLYHGIYKDEP-----VAVKII-RIPDDDENETLAARLEKQFNREVALLSRLHNPN 243
G +YHG D AVK + RI D E QF E ++ +PN
Sbjct: 39 GHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGE--------VSQFLTEGIIMKDFSHPN 90
Query: 244 VIKFVAAC-KKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIALDIARGMEYIHS 302
V+ + C + V+ Y+ G LR ++ H + LI L +A+GM+++ S
Sbjct: 91 VLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNP-TVKDLIGFGLQVAKGMKFLAS 149
Query: 303 QGVIHRDLKPENVLIDQEFHLKIADFGIACEEVY---CDALSDDPGT---YRWMAPEMIK 356
+ +HRDL N ++D++F +K+ADFG+A ++Y D++ + G +WMA E ++
Sbjct: 150 KKFVHRDLAARNCMLDEKFTVKVADFGLA-RDMYDKEFDSVHNKTGAKLPVKWMALESLQ 208
Query: 357 HKSYGRKVDVYSFGLILWE-MVAGTIPYEEMNPIQAAFAVVNKNLRPAIPGDCPPAMAAL 415
+ + K DV+SFG++LWE M G PY ++N ++ + R P CP + +
Sbjct: 209 TQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLL-QGRRLLQPEYCPDPLYEV 267
Query: 416 IEQCWSLQPDKRPEFWHIV 434
+ +CW + + RP F +V
Sbjct: 268 MLKCWHPKAEMRPSFSELV 286
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 112 bits (281), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 76/259 (29%), Positives = 128/259 (49%), Gaps = 25/259 (9%)
Query: 190 GAHSRLYHGIYKDEP-----VAVKII-RIPDDDENETLAARLEKQFNREVALLSRLHNPN 243
G +YHG D AVK + RI D E QF E ++ +PN
Sbjct: 41 GHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGE--------VSQFLTEGIIMKDFSHPN 92
Query: 244 VIKFVAAC-KKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIALDIARGMEYIHS 302
V+ + C + V+ Y+ G LR ++ H + LI L +A+GM+++ S
Sbjct: 93 VLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNP-TVKDLIGFGLQVAKGMKFLAS 151
Query: 303 QGVIHRDLKPENVLIDQEFHLKIADFGIACEEVY---CDALSDDPGT---YRWMAPEMIK 356
+ +HRDL N ++D++F +K+ADFG+A ++Y D++ + G +WMA E ++
Sbjct: 152 KKFVHRDLAARNCMLDEKFTVKVADFGLA-RDMYDKEFDSVHNKTGAKLPVKWMALESLQ 210
Query: 357 HKSYGRKVDVYSFGLILWE-MVAGTIPYEEMNPIQAAFAVVNKNLRPAIPGDCPPAMAAL 415
+ + K DV+SFG++LWE M G PY ++N ++ + R P CP + +
Sbjct: 211 TQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLL-QGRRLLQPEYCPDPLYEV 269
Query: 416 IEQCWSLQPDKRPEFWHIV 434
+ +CW + + RP F +V
Sbjct: 270 MLKCWHPKAEMRPSFSELV 288
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 112 bits (280), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 76/259 (29%), Positives = 128/259 (49%), Gaps = 25/259 (9%)
Query: 190 GAHSRLYHGIYKDEP-----VAVKII-RIPDDDENETLAARLEKQFNREVALLSRLHNPN 243
G +YHG D AVK + RI D E QF E ++ +PN
Sbjct: 41 GHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGE--------VSQFLTEGIIMKDFSHPN 92
Query: 244 VIKFVAAC-KKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIALDIARGMEYIHS 302
V+ + C + V+ Y+ G LR ++ H + LI L +A+GM+++ S
Sbjct: 93 VLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNP-TVKDLIGFGLQVAKGMKFLAS 151
Query: 303 QGVIHRDLKPENVLIDQEFHLKIADFGIACEEVY---CDALSDDPGT---YRWMAPEMIK 356
+ +HRDL N ++D++F +K+ADFG+A ++Y D++ + G +WMA E ++
Sbjct: 152 KKFVHRDLAARNCMLDEKFTVKVADFGLA-RDMYDKEFDSVHNKTGAKLPVKWMALESLQ 210
Query: 357 HKSYGRKVDVYSFGLILWE-MVAGTIPYEEMNPIQAAFAVVNKNLRPAIPGDCPPAMAAL 415
+ + K DV+SFG++LWE M G PY ++N ++ + R P CP + +
Sbjct: 211 TQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLL-QGRRLLQPEYCPDPLYEV 269
Query: 416 IEQCWSLQPDKRPEFWHIV 434
+ +CW + + RP F +V
Sbjct: 270 MLKCWHPKAEMRPSFSELV 288
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 112 bits (280), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 108/219 (49%), Gaps = 9/219 (4%)
Query: 217 ENETLAARLEKQFNREVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKL 276
+NE L+ + E ++ +L NP +++ + C+ + ++ E G L YL +
Sbjct: 406 KNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEAES-WMLVMEMAELGPLNKYLQQN 464
Query: 277 EHKTLPLPKLIAIALDIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIA----C 332
H + +I + ++ GM+Y+ +HRDL NVL+ + + KI+DFG++
Sbjct: 465 RH--VKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRA 522
Query: 333 EEVYCDALSDDPGTYRWMAPEMIKHKSYGRKVDVYSFGLILWEMVA-GTIPYEEMNPIQA 391
+E Y A + +W APE I + + K DV+SFG+++WE + G PY M +
Sbjct: 523 DENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEV 582
Query: 392 AFAVVNKNLRPAIPGDCPPAMAALIEQCWSLQPDKRPEF 430
A++ K R P CP M L+ CW+ + RP F
Sbjct: 583 T-AMLEKGERMGCPAGCPREMYDLMNLCWTYDVENRPGF 620
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 112 bits (280), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 76/259 (29%), Positives = 128/259 (49%), Gaps = 25/259 (9%)
Query: 190 GAHSRLYHGIYKDEP-----VAVKII-RIPDDDENETLAARLEKQFNREVALLSRLHNPN 243
G +YHG D AVK + RI D E QF E ++ +PN
Sbjct: 46 GHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGE--------VSQFLTEGIIMKDFSHPN 97
Query: 244 VIKFVAAC-KKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIALDIARGMEYIHS 302
V+ + C + V+ Y+ G LR ++ H + LI L +A+GM+++ S
Sbjct: 98 VLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNP-TVKDLIGFGLQVAKGMKFLAS 156
Query: 303 QGVIHRDLKPENVLIDQEFHLKIADFGIACEEVY---CDALSDDPGT---YRWMAPEMIK 356
+ +HRDL N ++D++F +K+ADFG+A ++Y D++ + G +WMA E ++
Sbjct: 157 KKFVHRDLAARNCMLDEKFTVKVADFGLA-RDMYDKEFDSVHNKTGAKLPVKWMALESLQ 215
Query: 357 HKSYGRKVDVYSFGLILWE-MVAGTIPYEEMNPIQAAFAVVNKNLRPAIPGDCPPAMAAL 415
+ + K DV+SFG++LWE M G PY ++N ++ + R P CP + +
Sbjct: 216 TQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLL-QGRRLLQPEYCPDPLYEV 274
Query: 416 IEQCWSLQPDKRPEFWHIV 434
+ +CW + + RP F +V
Sbjct: 275 MLKCWHPKAEMRPSFSELV 293
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 112 bits (280), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 75/258 (29%), Positives = 127/258 (49%), Gaps = 23/258 (8%)
Query: 190 GAHSRLYHGIYKDEP-----VAVKII-RIPDDDENETLAARLEKQFNREVALLSRLHNPN 243
G +YHG D AVK + RI D E QF E ++ +PN
Sbjct: 42 GHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGE--------VSQFLTEGIIMKDFSHPN 93
Query: 244 VIKFVAAC-KKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIALDIARGMEYIHS 302
V+ + C + V+ Y+ G LR ++ H + LI L +A+GM+++ S
Sbjct: 94 VLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNP-TVKDLIGFGLQVAKGMKFLAS 152
Query: 303 QGVIHRDLKPENVLIDQEFHLKIADFGIACEEV--YCDALSDDPGT---YRWMAPEMIKH 357
+ +HRDL N ++D++F +K+ADFG+A + + D++ + G +WMA E ++
Sbjct: 153 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMLDKEFDSVHNKTGAKLPVKWMALESLQT 212
Query: 358 KSYGRKVDVYSFGLILWE-MVAGTIPYEEMNPIQAAFAVVNKNLRPAIPGDCPPAMAALI 416
+ + K DV+SFG++LWE M G PY ++N ++ + R P CP + ++
Sbjct: 213 QKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLL-QGRRLLQPEYCPDPLYEVM 271
Query: 417 EQCWSLQPDKRPEFWHIV 434
+CW + + RP F +V
Sbjct: 272 LKCWHPKAEMRPSFSELV 289
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 112 bits (280), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 108/219 (49%), Gaps = 9/219 (4%)
Query: 217 ENETLAARLEKQFNREVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKL 276
+NE L+ + E ++ +L NP +++ + C+ + ++ E G L YL +
Sbjct: 405 KNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEAES-WMLVMEMAELGPLNKYLQQN 463
Query: 277 EHKTLPLPKLIAIALDIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIA----C 332
H + +I + ++ GM+Y+ +HRDL NVL+ + + KI+DFG++
Sbjct: 464 RH--VKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRA 521
Query: 333 EEVYCDALSDDPGTYRWMAPEMIKHKSYGRKVDVYSFGLILWEMVA-GTIPYEEMNPIQA 391
+E Y A + +W APE I + + K DV+SFG+++WE + G PY M +
Sbjct: 522 DENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEV 581
Query: 392 AFAVVNKNLRPAIPGDCPPAMAALIEQCWSLQPDKRPEF 430
A++ K R P CP M L+ CW+ + RP F
Sbjct: 582 T-AMLEKGERMGCPAGCPREMYDLMNLCWTYDVENRPGF 619
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 112 bits (280), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 66/263 (25%), Positives = 132/263 (50%), Gaps = 12/263 (4%)
Query: 173 EHTVDLSQLFLGLRFAHGAHSRLYHGIYK--DEPVAVKIIRIPDDDENETLAARLEKQFN 230
++ + ++ LG G ++ GIY + P I+ + ++++ ++F
Sbjct: 384 DYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSV----REKFL 439
Query: 231 REVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIA 290
+E + + +P+++K + + PV+ +I E + G LR++L ++ +L L LI A
Sbjct: 440 QEALTMRQFDHPHIVKLIGVITENPVW-IIMELCTLGELRSFL-QVRKFSLDLASLILYA 497
Query: 291 LDIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIA--CEEVYCDALSDDPGTYR 348
++ + Y+ S+ +HRD+ NVL+ +K+ DFG++ E+ S +
Sbjct: 498 YQLSTALAYLESKRFVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGKLPIK 557
Query: 349 WMAPEMIKHKSYGRKVDVYSFGLILWEMVA-GTIPYEEMNPIQAAFAVVNKNLRPAIPGD 407
WMAPE I + + DV+ FG+ +WE++ G P++ + + N P +P +
Sbjct: 558 WMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLP-MPPN 616
Query: 408 CPPAMAALIEQCWSLQPDKRPEF 430
CPP + +L+ +CW+ P +RP F
Sbjct: 617 CPPTLYSLMTKCWAYDPSRRPRF 639
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 112 bits (279), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 69/255 (27%), Positives = 127/255 (49%), Gaps = 33/255 (12%)
Query: 186 RFAHGAHSRLYHGIYKDEPVAVKIIRIPDDDENETLAARLEKQFNREVALLSRLHNPNVI 245
+ G++ +Y I+K+ V I ++P + + + + +E++++ + +P+V+
Sbjct: 36 KLGEGSYGSVYKAIHKETGQIVAIKQVPVESDLQEII--------KEISIMQQCDSPHVV 87
Query: 246 KFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIALDIARGMEYIHSQGV 305
K+ + K ++ EY GS+ + +L +KTL ++ I +G+EY+H
Sbjct: 88 KYYGSYFKNTDLWIVMEYCGAGSVSDII-RLRNKTLTEDEIATILQSTLKGLEYLHFMRK 146
Query: 306 IHRDLKPENVLIDQEFHLKIADFGIACEEVYCDALSDDP---GTYRWMAPEMIKHKSYGR 362
IHRD+K N+L++ E H K+ADFG+A + D ++ GT WMAPE+I+ Y
Sbjct: 147 IHRDIKAGNILLNTEGHAKLADFGVAGQ--LTDXMAKRNXVIGTPFWMAPEVIQEIGYNC 204
Query: 363 KVDVYSFGLILWEMVAGTIPYEEMNPIQAAFAVVNKNLRPAIPGDCPPA----------M 412
D++S G+ EM G PY +++P++A F IP + PP
Sbjct: 205 VADIWSLGITAIEMAEGKPPYADIHPMRAIF---------MIPTNPPPTFRKPELWSDNF 255
Query: 413 AALIEQCWSLQPDKR 427
++QC P++R
Sbjct: 256 TDFVKQCLVKSPEQR 270
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 111 bits (278), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 76/232 (32%), Positives = 116/232 (50%), Gaps = 30/232 (12%)
Query: 234 ALLSRL-------HNPNVIKFVAACKKP--PVYCVITEYLSEGSLRAYLHKLEHKTLP-- 282
AL+S L H+ NV+ + AC KP P+ VITE+ G+L YL ++ +P
Sbjct: 67 ALMSELKILIHIGHHLNVVNLLGACTKPGGPLM-VITEFCKFGNLSTYLRSKRNEFVPYK 125
Query: 283 ------------LPKLIAIALDIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGI 330
L LI + +A+GME++ S+ IHRDL N+L+ ++ +KI DFG+
Sbjct: 126 VAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGL 185
Query: 331 ACEEVYCDALSDDPGTYR----WMAPEMIKHKSYGRKVDVYSFGLILWEMVA-GTIPYEE 385
A ++Y D G R WMAPE I + Y + DV+SFG++LWE+ + G PY
Sbjct: 186 A-RDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPG 244
Query: 386 MNPIQAAFAVVNKNLRPAIPGDCPPAMAALIEQCWSLQPDKRPEFWHIVKVL 437
+ + + + R P P M + CW +P +RP F +V+ L
Sbjct: 245 VKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHL 296
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 111 bits (278), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 76/232 (32%), Positives = 116/232 (50%), Gaps = 30/232 (12%)
Query: 234 ALLSRL-------HNPNVIKFVAACKKP--PVYCVITEYLSEGSLRAYLHKLEHKTLP-- 282
AL+S L H+ NV+ + AC KP P+ VITE+ G+L YL ++ +P
Sbjct: 67 ALMSELKILIHIGHHLNVVNLLGACTKPGGPLM-VITEFCKFGNLSTYLRSKRNEFVPYK 125
Query: 283 ------------LPKLIAIALDIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGI 330
L LI + +A+GME++ S+ IHRDL N+L+ ++ +KI DFG+
Sbjct: 126 VAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGL 185
Query: 331 ACEEVYCDALSDDPGTYR----WMAPEMIKHKSYGRKVDVYSFGLILWEMVA-GTIPYEE 385
A ++Y D G R WMAPE I + Y + DV+SFG++LWE+ + G PY
Sbjct: 186 A-RDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPG 244
Query: 386 MNPIQAAFAVVNKNLRPAIPGDCPPAMAALIEQCWSLQPDKRPEFWHIVKVL 437
+ + + + R P P M + CW +P +RP F +V+ L
Sbjct: 245 VKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHL 296
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 111 bits (278), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 108/219 (49%), Gaps = 9/219 (4%)
Query: 217 ENETLAARLEKQFNREVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKL 276
+NE L+ + E ++ +L NP +++ + C+ + ++ E G L YL +
Sbjct: 41 KNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEAES-WMLVMEMAELGPLNKYLQQN 99
Query: 277 EHKTLPLPKLIAIALDIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIA----C 332
H + +I + ++ GM+Y+ +HRDL NVL+ + + KI+DFG++
Sbjct: 100 RH--VKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRA 157
Query: 333 EEVYCDALSDDPGTYRWMAPEMIKHKSYGRKVDVYSFGLILWEMVA-GTIPYEEMNPIQA 391
+E Y A + +W APE I + + K DV+SFG+++WE + G PY M +
Sbjct: 158 DENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEV 217
Query: 392 AFAVVNKNLRPAIPGDCPPAMAALIEQCWSLQPDKRPEF 430
A++ K R P CP M L+ CW+ + RP F
Sbjct: 218 T-AMLEKGERMGCPAGCPREMYDLMNLCWTYDVENRPGF 255
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 111 bits (278), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 77/262 (29%), Positives = 127/262 (48%), Gaps = 27/262 (10%)
Query: 188 AHGAHSRLYHGIYKDEP-----VAVKII-RIPDDDENETLAARLEKQFNREVALLSRLHN 241
G +YHG D AVK + RI D E QF E ++ +
Sbjct: 57 GRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGE--------VSQFLTEGIIMKDFSH 108
Query: 242 PNVIKFVAAC-KKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIALDIARGMEYI 300
PNV+ + C + V+ Y+ G LR ++ H + LI L +A+GM+Y+
Sbjct: 109 PNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNP-TVKDLIGFGLQVAKGMKYL 167
Query: 301 HSQGVIHRDLKPENVLIDQEFHLKIADFGIACE----EVYCDALSDDPGT---YRWMAPE 353
S+ +HRDL N ++D++F +K+ADFG+A + E Y ++ + G +WMA E
Sbjct: 168 ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYY--SVHNKTGAKLPVKWMALE 225
Query: 354 MIKHKSYGRKVDVYSFGLILWE-MVAGTIPYEEMNPIQAAFAVVNKNLRPAIPGDCPPAM 412
++ + + K DV+SFG++LWE M G PY ++N ++ + R P CP +
Sbjct: 226 SLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLL-QGRRLLQPEYCPDPL 284
Query: 413 AALIEQCWSLQPDKRPEFWHIV 434
++ +CW + + RP F +V
Sbjct: 285 YEVMLKCWHPKAEMRPSFSELV 306
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 111 bits (277), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 78/264 (29%), Positives = 129/264 (48%), Gaps = 31/264 (11%)
Query: 188 AHGAHSRLYHGIYKDEP-----VAVKII-RIPDDDENETLAARLEKQFNREVALLSRLHN 241
G +YHG D AVK + RI D E QF E ++ +
Sbjct: 31 GRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGE--------VSQFLTEGIIMKDFSH 82
Query: 242 PNVIKFVAACKKP---PVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIALDIARGME 298
PNV+ + C + P+ V+ Y+ G LR ++ H + LI L +A+GM+
Sbjct: 83 PNVLSLLGICLRSEGSPL--VVLPYMKHGDLRNFIRNETHNP-TVKDLIGFGLQVAKGMK 139
Query: 299 YIHSQGVIHRDLKPENVLIDQEFHLKIADFGIACE----EVYCDALSDDPGT---YRWMA 351
Y+ S+ +HRDL N ++D++F +K+ADFG+A + E Y ++ + G +WMA
Sbjct: 140 YLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYY--SVHNKTGAKLPVKWMA 197
Query: 352 PEMIKHKSYGRKVDVYSFGLILWE-MVAGTIPYEEMNPIQAAFAVVNKNLRPAIPGDCPP 410
E ++ + + K DV+SFG++LWE M G PY ++N ++ + R P CP
Sbjct: 198 LESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLL-QGRRLLQPEYCPD 256
Query: 411 AMAALIEQCWSLQPDKRPEFWHIV 434
+ ++ +CW + + RP F +V
Sbjct: 257 PLYEVMLKCWHPKAEMRPSFSELV 280
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 111 bits (277), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 117/230 (50%), Gaps = 16/230 (6%)
Query: 205 VAVKIIRIPDDDENETLAARLEKQFNREVALLSRLHNPNVIKFVAACKKPPVYCVITEYL 264
VA+K+I+ E+E F E ++ L + +++ C K +ITEY+
Sbjct: 36 VAIKMIKEGSMSEDE---------FIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYM 86
Query: 265 SEGSLRAYLHKLEHKTLPLPKLIAIALDIARGMEYIHSQGVIHRDLKPENVLIDQEFHLK 324
+ G L YL ++ H+ +L+ + D+ MEY+ S+ +HRDL N L++ + +K
Sbjct: 87 ANGCLLNYLREMRHR-FQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVK 145
Query: 325 IADFGIACEEVYCDALSDDPGT---YRWMAPEMIKHKSYGRKVDVYSFGLILWEMVA-GT 380
++DFG++ V D + G+ RW PE++ + + K D+++FG+++WE+ + G
Sbjct: 146 VSDFGLS-RYVLDDEYTSSRGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGK 204
Query: 381 IPYEEMNPIQAAFAVVNKNLRPAIPGDCPPAMAALIEQCWSLQPDKRPEF 430
+PYE + A + + LR P + ++ CW + D+RP F
Sbjct: 205 MPYERFTNSETA-EHIAQGLRLYRPHLASEKVYTIMYSCWHEKADERPTF 253
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 111 bits (277), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 76/260 (29%), Positives = 124/260 (47%), Gaps = 23/260 (8%)
Query: 188 AHGAHSRLYHGIYKDEP-----VAVKII-RIPDDDENETLAARLEKQFNREVALLSRLHN 241
G +YHG D AVK + RI D E QF E ++ +
Sbjct: 38 GRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGE--------VSQFLTEGIIMKDFSH 89
Query: 242 PNVIKFVAAC-KKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIALDIARGMEYI 300
PNV+ + C + V+ Y+ G LR ++ H + LI L +A+GM+Y+
Sbjct: 90 PNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNP-TVKDLIGFGLQVAKGMKYL 148
Query: 301 HSQGVIHRDLKPENVLIDQEFHLKIADFGIACEEVYCDALSDDPGT-----YRWMAPEMI 355
S+ +HRDL N ++D++F +K+ADFG+A + + S T +WMA E +
Sbjct: 149 ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEXXSVHNKTGAKLPVKWMALESL 208
Query: 356 KHKSYGRKVDVYSFGLILWE-MVAGTIPYEEMNPIQAAFAVVNKNLRPAIPGDCPPAMAA 414
+ + + K DV+SFG++LWE M G PY ++N ++ + R P CP +
Sbjct: 209 QTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLL-QGRRLLQPEYCPDPLYE 267
Query: 415 LIEQCWSLQPDKRPEFWHIV 434
++ +CW + + RP F +V
Sbjct: 268 VMLKCWHPKAEMRPSFSELV 287
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 108/219 (49%), Gaps = 9/219 (4%)
Query: 217 ENETLAARLEKQFNREVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKL 276
+NE L+ + E ++ +L NP +++ + C+ + ++ E G L YL +
Sbjct: 43 KNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEAES-WMLVMEMAELGPLNKYLQQN 101
Query: 277 EHKTLPLPKLIAIALDIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIA----C 332
H + +I + ++ GM+Y+ +HRDL NVL+ + + KI+DFG++
Sbjct: 102 RH--VKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRA 159
Query: 333 EEVYCDALSDDPGTYRWMAPEMIKHKSYGRKVDVYSFGLILWEMVA-GTIPYEEMNPIQA 391
+E Y A + +W APE I + + K DV+SFG+++WE + G PY M +
Sbjct: 160 DENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEV 219
Query: 392 AFAVVNKNLRPAIPGDCPPAMAALIEQCWSLQPDKRPEF 430
A++ K R P CP M L+ CW+ + RP F
Sbjct: 220 T-AMLEKGERMGCPAGCPREMYDLMNLCWTYDVENRPGF 257
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 117/230 (50%), Gaps = 16/230 (6%)
Query: 205 VAVKIIRIPDDDENETLAARLEKQFNREVALLSRLHNPNVIKFVAACKKPPVYCVITEYL 264
VA+K+I+ E+E F E ++ L + +++ C K +ITEY+
Sbjct: 42 VAIKMIKEGSMSEDE---------FIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYM 92
Query: 265 SEGSLRAYLHKLEHKTLPLPKLIAIALDIARGMEYIHSQGVIHRDLKPENVLIDQEFHLK 324
+ G L YL ++ H+ +L+ + D+ MEY+ S+ +HRDL N L++ + +K
Sbjct: 93 ANGCLLNYLREMRHR-FQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVK 151
Query: 325 IADFGIACEEVYCDALSDDPGT---YRWMAPEMIKHKSYGRKVDVYSFGLILWEMVA-GT 380
++DFG++ V D + G+ RW PE++ + + K D+++FG+++WE+ + G
Sbjct: 152 VSDFGLS-RYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGK 210
Query: 381 IPYEEMNPIQAAFAVVNKNLRPAIPGDCPPAMAALIEQCWSLQPDKRPEF 430
+PYE + A + + LR P + ++ CW + D+RP F
Sbjct: 211 MPYERFTNSETA-EHIAQGLRLYRPHLASEKVYTIMYSCWHEKADERPTF 259
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 117/230 (50%), Gaps = 16/230 (6%)
Query: 205 VAVKIIRIPDDDENETLAARLEKQFNREVALLSRLHNPNVIKFVAACKKPPVYCVITEYL 264
VA+K+I+ E+E F E ++ L + +++ C K +ITEY+
Sbjct: 51 VAIKMIKEGSMSEDE---------FIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYM 101
Query: 265 SEGSLRAYLHKLEHKTLPLPKLIAIALDIARGMEYIHSQGVIHRDLKPENVLIDQEFHLK 324
+ G L YL ++ H+ +L+ + D+ MEY+ S+ +HRDL N L++ + +K
Sbjct: 102 ANGCLLNYLREMRHR-FQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVK 160
Query: 325 IADFGIACEEVYCDALSDDPGT---YRWMAPEMIKHKSYGRKVDVYSFGLILWEMVA-GT 380
++DFG++ V D + G+ RW PE++ + + K D+++FG+++WE+ + G
Sbjct: 161 VSDFGLS-RYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGK 219
Query: 381 IPYEEMNPIQAAFAVVNKNLRPAIPGDCPPAMAALIEQCWSLQPDKRPEF 430
+PYE + A + + LR P + ++ CW + D+RP F
Sbjct: 220 MPYERFTNSETAEHIA-QGLRLYRPHLASEKVYTIMYSCWHEKADERPTF 268
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 108/219 (49%), Gaps = 9/219 (4%)
Query: 217 ENETLAARLEKQFNREVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKL 276
+NE L+ + E ++ +L NP +++ + C+ + ++ E G L YL +
Sbjct: 47 KNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEAES-WMLVMEMAELGPLNKYLQQN 105
Query: 277 EHKTLPLPKLIAIALDIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIA----C 332
H + +I + ++ GM+Y+ +HRDL NVL+ + + KI+DFG++
Sbjct: 106 RH--VKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRA 163
Query: 333 EEVYCDALSDDPGTYRWMAPEMIKHKSYGRKVDVYSFGLILWEMVA-GTIPYEEMNPIQA 391
+E Y A + +W APE I + + K DV+SFG+++WE + G PY M +
Sbjct: 164 DENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEV 223
Query: 392 AFAVVNKNLRPAIPGDCPPAMAALIEQCWSLQPDKRPEF 430
A++ K R P CP M L+ CW+ + RP F
Sbjct: 224 T-AMLEKGERMGCPAGCPREMYDLMNLCWTYDVENRPGF 261
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 117/230 (50%), Gaps = 16/230 (6%)
Query: 205 VAVKIIRIPDDDENETLAARLEKQFNREVALLSRLHNPNVIKFVAACKKPPVYCVITEYL 264
VA+K+I+ E+E F E ++ L + +++ C K +ITEY+
Sbjct: 31 VAIKMIKEGSMSEDE---------FIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYM 81
Query: 265 SEGSLRAYLHKLEHKTLPLPKLIAIALDIARGMEYIHSQGVIHRDLKPENVLIDQEFHLK 324
+ G L YL ++ H+ +L+ + D+ MEY+ S+ +HRDL N L++ + +K
Sbjct: 82 ANGCLLNYLREMRHR-FQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVK 140
Query: 325 IADFGIACEEVYCDALSDDPGT---YRWMAPEMIKHKSYGRKVDVYSFGLILWEMVA-GT 380
++DFG++ V D + G+ RW PE++ + + K D+++FG+++WE+ + G
Sbjct: 141 VSDFGLS-RYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGK 199
Query: 381 IPYEEMNPIQAAFAVVNKNLRPAIPGDCPPAMAALIEQCWSLQPDKRPEF 430
+PYE + A + + LR P + ++ CW + D+RP F
Sbjct: 200 MPYERFTNSETA-EHIAQGLRLYRPHLASEKVYTIMYSCWHEKADERPTF 248
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 82/272 (30%), Positives = 137/272 (50%), Gaps = 12/272 (4%)
Query: 166 NAVDAADEHT-VDLSQLFLGLRFAHGAHSRLYHGIYKDEPVAVKIIRIPDDDENETLAAR 224
N+ +ADE + +L + + A +L I + VAVKII D+ + ++
Sbjct: 2 NSATSADEQPHIGNYRLLKTIGKGNFAKVKLARHILTGKEVAVKII-----DKTQLNSSS 56
Query: 225 LEKQFNREVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLP 284
L+K F REV + L++PN++K + ++ EY S G + YL + H
Sbjct: 57 LQKLF-REVRIXKVLNHPNIVKLFEVIETEKTLYLVXEYASGGEVFDYL--VAHGRXKEK 113
Query: 285 KLIAIALDIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIACEEVYCDALSDDP 344
+ A I ++Y H + ++HRDLK EN+L+D + ++KIADFG + E + + L
Sbjct: 114 EARAKFRQIVSAVQYCHQKFIVHRDLKAENLLLDADXNIKIADFGFSNEFTFGNKLDAFC 173
Query: 345 GTYRWMAPEMIKHKSY-GRKVDVYSFGLILWEMVAGTIPYEEMNPIQAAFAVVNKNLRPA 403
G + APE+ + K Y G +VDV+S G+IL+ +V+G++P++ N + V+ R
Sbjct: 174 GAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYR-- 231
Query: 404 IPGDCPPAMAALIEQCWSLQPDKRPEFWHIVK 435
IP L+++ L P KR I K
Sbjct: 232 IPFYXSTDCENLLKKFLILNPSKRGTLEQIXK 263
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 77/262 (29%), Positives = 127/262 (48%), Gaps = 27/262 (10%)
Query: 188 AHGAHSRLYHGIYKDEP-----VAVKII-RIPDDDENETLAARLEKQFNREVALLSRLHN 241
G +YHG D AVK + RI D E QF E ++ +
Sbjct: 39 GRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGE--------VSQFLTEGIIMKDFSH 90
Query: 242 PNVIKFVAAC-KKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIALDIARGMEYI 300
PNV+ + C + V+ Y+ G LR ++ H + LI L +A+GM+Y+
Sbjct: 91 PNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNP-TVKDLIGFGLQVAKGMKYL 149
Query: 301 HSQGVIHRDLKPENVLIDQEFHLKIADFGIACE----EVYCDALSDDPGT---YRWMAPE 353
S+ +HRDL N ++D++F +K+ADFG+A + E Y ++ + G +WMA E
Sbjct: 150 ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYY--SVHNKTGAKLPVKWMALE 207
Query: 354 MIKHKSYGRKVDVYSFGLILWE-MVAGTIPYEEMNPIQAAFAVVNKNLRPAIPGDCPPAM 412
++ + + K DV+SFG++LWE M G PY ++N ++ + R P CP +
Sbjct: 208 SLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLL-QGRRLLQPEYCPDPL 266
Query: 413 AALIEQCWSLQPDKRPEFWHIV 434
++ +CW + + RP F +V
Sbjct: 267 YEVMLKCWHPKAEMRPSFSELV 288
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 117/230 (50%), Gaps = 16/230 (6%)
Query: 205 VAVKIIRIPDDDENETLAARLEKQFNREVALLSRLHNPNVIKFVAACKKPPVYCVITEYL 264
VA+K+I+ E+E F E ++ L + +++ C K +ITEY+
Sbjct: 35 VAIKMIKEGSMSEDE---------FIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYM 85
Query: 265 SEGSLRAYLHKLEHKTLPLPKLIAIALDIARGMEYIHSQGVIHRDLKPENVLIDQEFHLK 324
+ G L YL ++ H+ +L+ + D+ MEY+ S+ +HRDL N L++ + +K
Sbjct: 86 ANGCLLNYLREMRHR-FQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVK 144
Query: 325 IADFGIACEEVYCDALSDDPGT---YRWMAPEMIKHKSYGRKVDVYSFGLILWEMVA-GT 380
++DFG++ V D + G+ RW PE++ + + K D+++FG+++WE+ + G
Sbjct: 145 VSDFGLS-RYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGK 203
Query: 381 IPYEEMNPIQAAFAVVNKNLRPAIPGDCPPAMAALIEQCWSLQPDKRPEF 430
+PYE + A + + LR P + ++ CW + D+RP F
Sbjct: 204 MPYERFTNSETA-EHIAQGLRLYRPHLASEKVYTIMYSCWHEKADERPTF 252
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 108/219 (49%), Gaps = 9/219 (4%)
Query: 217 ENETLAARLEKQFNREVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKL 276
+NE L+ + E ++ +L NP +++ + C+ + ++ E G L YL +
Sbjct: 61 KNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEAES-WMLVMEMAELGPLNKYLQQN 119
Query: 277 EHKTLPLPKLIAIALDIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIA----C 332
H + +I + ++ GM+Y+ +HRDL NVL+ + + KI+DFG++
Sbjct: 120 RH--VKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRA 177
Query: 333 EEVYCDALSDDPGTYRWMAPEMIKHKSYGRKVDVYSFGLILWEMVA-GTIPYEEMNPIQA 391
+E Y A + +W APE I + + K DV+SFG+++WE + G PY M +
Sbjct: 178 DENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEV 237
Query: 392 AFAVVNKNLRPAIPGDCPPAMAALIEQCWSLQPDKRPEF 430
A++ K R P CP M L+ CW+ + RP F
Sbjct: 238 T-AMLEKGERMGCPAGCPREMYDLMNLCWTYDVENRPGF 275
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 77/262 (29%), Positives = 127/262 (48%), Gaps = 27/262 (10%)
Query: 188 AHGAHSRLYHGIYKDEP-----VAVKII-RIPDDDENETLAARLEKQFNREVALLSRLHN 241
G +YHG D AVK + RI D E QF E ++ +
Sbjct: 58 GRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGE--------VSQFLTEGIIMKDFSH 109
Query: 242 PNVIKFVAAC-KKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIALDIARGMEYI 300
PNV+ + C + V+ Y+ G LR ++ H + LI L +A+GM+Y+
Sbjct: 110 PNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNP-TVKDLIGFGLQVAKGMKYL 168
Query: 301 HSQGVIHRDLKPENVLIDQEFHLKIADFGIACE----EVYCDALSDDPGT---YRWMAPE 353
S+ +HRDL N ++D++F +K+ADFG+A + E Y ++ + G +WMA E
Sbjct: 169 ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYY--SVHNKTGAKLPVKWMALE 226
Query: 354 MIKHKSYGRKVDVYSFGLILWE-MVAGTIPYEEMNPIQAAFAVVNKNLRPAIPGDCPPAM 412
++ + + K DV+SFG++LWE M G PY ++N ++ + R P CP +
Sbjct: 227 SLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLL-QGRRLLQPEYCPDPL 285
Query: 413 AALIEQCWSLQPDKRPEFWHIV 434
++ +CW + + RP F +V
Sbjct: 286 YEVMLKCWHPKAEMRPSFSELV 307
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 117/230 (50%), Gaps = 16/230 (6%)
Query: 205 VAVKIIRIPDDDENETLAARLEKQFNREVALLSRLHNPNVIKFVAACKKPPVYCVITEYL 264
VA+K+I+ E+E F E ++ L + +++ C K +ITEY+
Sbjct: 36 VAIKMIKEGSMSEDE---------FIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYM 86
Query: 265 SEGSLRAYLHKLEHKTLPLPKLIAIALDIARGMEYIHSQGVIHRDLKPENVLIDQEFHLK 324
+ G L YL ++ H+ +L+ + D+ MEY+ S+ +HRDL N L++ + +K
Sbjct: 87 ANGCLLNYLREMRHR-FQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVK 145
Query: 325 IADFGIACEEVYCDALSDDPGT---YRWMAPEMIKHKSYGRKVDVYSFGLILWEMVA-GT 380
++DFG++ V D + G+ RW PE++ + + K D+++FG+++WE+ + G
Sbjct: 146 VSDFGLS-RYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGK 204
Query: 381 IPYEEMNPIQAAFAVVNKNLRPAIPGDCPPAMAALIEQCWSLQPDKRPEF 430
+PYE + A + + LR P + ++ CW + D+RP F
Sbjct: 205 MPYERFTNSETA-EHIAQGLRLYRPHLASEKVYTIMYSCWHEKADERPTF 253
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 77/262 (29%), Positives = 127/262 (48%), Gaps = 27/262 (10%)
Query: 188 AHGAHSRLYHGIYKDEP-----VAVKII-RIPDDDENETLAARLEKQFNREVALLSRLHN 241
G +YHG D AVK + RI D E QF E ++ +
Sbjct: 37 GRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGE--------VSQFLTEGIIMKDFSH 88
Query: 242 PNVIKFVAAC-KKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIALDIARGMEYI 300
PNV+ + C + V+ Y+ G LR ++ H + LI L +A+GM+Y+
Sbjct: 89 PNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNP-TVKDLIGFGLQVAKGMKYL 147
Query: 301 HSQGVIHRDLKPENVLIDQEFHLKIADFGIACE----EVYCDALSDDPGT---YRWMAPE 353
S+ +HRDL N ++D++F +K+ADFG+A + E Y ++ + G +WMA E
Sbjct: 148 ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYY--SVHNKTGAKLPVKWMALE 205
Query: 354 MIKHKSYGRKVDVYSFGLILWE-MVAGTIPYEEMNPIQAAFAVVNKNLRPAIPGDCPPAM 412
++ + + K DV+SFG++LWE M G PY ++N ++ + R P CP +
Sbjct: 206 SLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLL-QGRRLLQPEYCPDPL 264
Query: 413 AALIEQCWSLQPDKRPEFWHIV 434
++ +CW + + RP F +V
Sbjct: 265 YEVMLKCWHPKAEMRPSFSELV 286
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 108/219 (49%), Gaps = 9/219 (4%)
Query: 217 ENETLAARLEKQFNREVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKL 276
+NE L+ + E ++ +L NP +++ + C+ + ++ E G L YL +
Sbjct: 53 KNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEAES-WMLVMEMAELGPLNKYLQQN 111
Query: 277 EHKTLPLPKLIAIALDIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIA----C 332
H + +I + ++ GM+Y+ +HRDL NVL+ + + KI+DFG++
Sbjct: 112 RH--VKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRA 169
Query: 333 EEVYCDALSDDPGTYRWMAPEMIKHKSYGRKVDVYSFGLILWEMVA-GTIPYEEMNPIQA 391
+E Y A + +W APE I + + K DV+SFG+++WE + G PY M +
Sbjct: 170 DENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEV 229
Query: 392 AFAVVNKNLRPAIPGDCPPAMAALIEQCWSLQPDKRPEF 430
A++ K R P CP M L+ CW+ + RP F
Sbjct: 230 T-AMLEKGERMGCPAGCPREMYDLMNLCWTYDVENRPGF 267
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 78/264 (29%), Positives = 129/264 (48%), Gaps = 31/264 (11%)
Query: 188 AHGAHSRLYHGIYKDEP-----VAVKII-RIPDDDENETLAARLEKQFNREVALLSRLHN 241
G +YHG D AVK + RI D E QF E ++ +
Sbjct: 36 GRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGE--------VSQFLTEGIIMKDFSH 87
Query: 242 PNVIKFVAACKKP---PVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIALDIARGME 298
PNV+ + C + P+ V+ Y+ G LR ++ H + LI L +A+GM+
Sbjct: 88 PNVLSLLGICLRSEGSPL--VVLPYMKHGDLRNFIRNETHNP-TVKDLIGFGLQVAKGMK 144
Query: 299 YIHSQGVIHRDLKPENVLIDQEFHLKIADFGIACE----EVYCDALSDDPGT---YRWMA 351
Y+ S+ +HRDL N ++D++F +K+ADFG+A + E Y ++ + G +WMA
Sbjct: 145 YLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYY--SVHNKTGAKLPVKWMA 202
Query: 352 PEMIKHKSYGRKVDVYSFGLILWE-MVAGTIPYEEMNPIQAAFAVVNKNLRPAIPGDCPP 410
E ++ + + K DV+SFG++LWE M G PY ++N ++ + R P CP
Sbjct: 203 LESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLL-QGRRLLQPEYCPD 261
Query: 411 AMAALIEQCWSLQPDKRPEFWHIV 434
+ ++ +CW + + RP F +V
Sbjct: 262 PLYEVMLKCWHPKAEMRPSFSELV 285
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 78/262 (29%), Positives = 129/262 (49%), Gaps = 31/262 (11%)
Query: 190 GAHSRLYHGIYKDEP-----VAVKII-RIPDDDENETLAARLEKQFNREVALLSRLHNPN 243
G +YHG D AVK + RI D E QF E ++ +PN
Sbjct: 41 GHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGE--------VSQFLTEGIIMKDFSHPN 92
Query: 244 VIKFVAACKKP---PVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIALDIARGMEYI 300
V+ + C + P+ V+ Y+ G LR ++ H + LI L +A+GM+Y+
Sbjct: 93 VLSLLGICLRSEGSPL--VVLPYMKHGDLRNFIRNETHNP-TVKDLIGFGLQVAKGMKYL 149
Query: 301 HSQGVIHRDLKPENVLIDQEFHLKIADFGIACE----EVYCDALSDDPGT---YRWMAPE 353
S+ +HRDL N ++D++F +K+ADFG+A + E Y ++ + G +WMA E
Sbjct: 150 ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYY--SVHNKTGAKLPVKWMALE 207
Query: 354 MIKHKSYGRKVDVYSFGLILWE-MVAGTIPYEEMNPIQAAFAVVNKNLRPAIPGDCPPAM 412
++ + + K DV+SFG++LWE M G PY ++N ++ + R P CP +
Sbjct: 208 SLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLL-QGRRLLQPEYCPDPL 266
Query: 413 AALIEQCWSLQPDKRPEFWHIV 434
++ +CW + + RP F +V
Sbjct: 267 YEVMLKCWHPKAEMRPSFSELV 288
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 78/264 (29%), Positives = 129/264 (48%), Gaps = 31/264 (11%)
Query: 188 AHGAHSRLYHGIYKDEP-----VAVKII-RIPDDDENETLAARLEKQFNREVALLSRLHN 241
G +YHG D AVK + RI D E QF E ++ +
Sbjct: 34 GRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGE--------VSQFLTEGIIMKDFSH 85
Query: 242 PNVIKFVAACKKP---PVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIALDIARGME 298
PNV+ + C + P+ V+ Y+ G LR ++ H + LI L +A+GM+
Sbjct: 86 PNVLSLLGICLRSEGSPL--VVLPYMKHGDLRNFIRNETHNP-TVKDLIGFGLQVAKGMK 142
Query: 299 YIHSQGVIHRDLKPENVLIDQEFHLKIADFGIACE----EVYCDALSDDPGT---YRWMA 351
Y+ S+ +HRDL N ++D++F +K+ADFG+A + E Y ++ + G +WMA
Sbjct: 143 YLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYY--SVHNKTGAKLPVKWMA 200
Query: 352 PEMIKHKSYGRKVDVYSFGLILWE-MVAGTIPYEEMNPIQAAFAVVNKNLRPAIPGDCPP 410
E ++ + + K DV+SFG++LWE M G PY ++N ++ + R P CP
Sbjct: 201 LESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLL-QGRRLLQPEYCPD 259
Query: 411 AMAALIEQCWSLQPDKRPEFWHIV 434
+ ++ +CW + + RP F +V
Sbjct: 260 PLYEVMLKCWHPKAEMRPSFSELV 283
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 108/219 (49%), Gaps = 9/219 (4%)
Query: 217 ENETLAARLEKQFNREVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKL 276
+NE L+ + E ++ +L NP +++ + C+ + ++ E G L YL +
Sbjct: 63 KNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEAES-WMLVMEMAELGPLNKYLQQN 121
Query: 277 EHKTLPLPKLIAIALDIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIA----C 332
H + +I + ++ GM+Y+ +HRDL NVL+ + + KI+DFG++
Sbjct: 122 RH--VKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRA 179
Query: 333 EEVYCDALSDDPGTYRWMAPEMIKHKSYGRKVDVYSFGLILWEMVA-GTIPYEEMNPIQA 391
+E Y A + +W APE I + + K DV+SFG+++WE + G PY M +
Sbjct: 180 DENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEV 239
Query: 392 AFAVVNKNLRPAIPGDCPPAMAALIEQCWSLQPDKRPEF 430
A++ K R P CP M L+ CW+ + RP F
Sbjct: 240 T-AMLEKGERMGCPAGCPREMYDLMNLCWTYDVENRPGF 277
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 108/219 (49%), Gaps = 9/219 (4%)
Query: 217 ENETLAARLEKQFNREVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKL 276
+NE L+ + E ++ +L NP +++ + C+ + ++ E G L YL +
Sbjct: 63 KNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEAES-WMLVMEMAELGPLNKYLQQN 121
Query: 277 EHKTLPLPKLIAIALDIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIA----C 332
H + +I + ++ GM+Y+ +HRDL NVL+ + + KI+DFG++
Sbjct: 122 RH--VKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRA 179
Query: 333 EEVYCDALSDDPGTYRWMAPEMIKHKSYGRKVDVYSFGLILWEMVA-GTIPYEEMNPIQA 391
+E Y A + +W APE I + + K DV+SFG+++WE + G PY M +
Sbjct: 180 DENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEV 239
Query: 392 AFAVVNKNLRPAIPGDCPPAMAALIEQCWSLQPDKRPEF 430
A++ K R P CP M L+ CW+ + RP F
Sbjct: 240 T-AMLEKGERMGCPAGCPREMYDLMNLCWTYDVENRPGF 277
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 78/262 (29%), Positives = 129/262 (49%), Gaps = 31/262 (11%)
Query: 190 GAHSRLYHGIYKDEP-----VAVKII-RIPDDDENETLAARLEKQFNREVALLSRLHNPN 243
G +YHG D AVK + RI D E QF E ++ +PN
Sbjct: 40 GHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGE--------VSQFLTEGIIMKDFSHPN 91
Query: 244 VIKFVAACKKP---PVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIALDIARGMEYI 300
V+ + C + P+ V+ Y+ G LR ++ H + LI L +A+GM+Y+
Sbjct: 92 VLSLLGICLRSEGSPL--VVLPYMKHGDLRNFIRNETHNP-TVKDLIGFGLQVAKGMKYL 148
Query: 301 HSQGVIHRDLKPENVLIDQEFHLKIADFGIACE----EVYCDALSDDPGT---YRWMAPE 353
S+ +HRDL N ++D++F +K+ADFG+A + E Y ++ + G +WMA E
Sbjct: 149 ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYY--SVHNKTGAKLPVKWMALE 206
Query: 354 MIKHKSYGRKVDVYSFGLILWE-MVAGTIPYEEMNPIQAAFAVVNKNLRPAIPGDCPPAM 412
++ + + K DV+SFG++LWE M G PY ++N ++ + R P CP +
Sbjct: 207 SLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLL-QGRRLLQPEYCPDPL 265
Query: 413 AALIEQCWSLQPDKRPEFWHIV 434
++ +CW + + RP F +V
Sbjct: 266 YEVMLKCWHPKAEMRPSFSELV 287
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 75/228 (32%), Positives = 115/228 (50%), Gaps = 26/228 (11%)
Query: 234 ALLSRL-------HNPNVIKFVAACKKP--PVYCVITEYLSEGSLRAYLHKLEHKTLP-- 282
AL+S L H+ NV+ + AC KP P+ VI E+ G+L YL ++ +P
Sbjct: 76 ALMSELKILIHIGHHLNVVNLLGACTKPGGPL-MVIVEFCKFGNLSTYLRSKRNEFVPYK 134
Query: 283 --------LPKLIAIALDIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIACEE 334
L LI + +A+GME++ S+ IHRDL N+L+ ++ +KI DFG+A +
Sbjct: 135 DLYKDFLTLEHLIXYSFQVAKGMEFLASRKXIHRDLAARNILLSEKNVVKIXDFGLA-RD 193
Query: 335 VYCDALSDDPGTYR----WMAPEMIKHKSYGRKVDVYSFGLILWEMVA-GTIPYEEMNPI 389
+Y D G R WMAPE I + Y + DV+SFG++LWE+ + G PY +
Sbjct: 194 IYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKID 253
Query: 390 QAAFAVVNKNLRPAIPGDCPPAMAALIEQCWSLQPDKRPEFWHIVKVL 437
+ + + R P P M + CW +P +RP F +V+ L
Sbjct: 254 EEFXRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHL 301
>pdb|3KMU|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Apo)
Length = 271
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 77/278 (27%), Positives = 134/278 (48%), Gaps = 27/278 (9%)
Query: 176 VDLSQLFLGLRFAHGAHSRLYHGIYKDEPVAVKIIRIPDDDENETLAARLEKQFNREVAL 235
+D QL + L+ G ++ + VK++++ D + R + FN E
Sbjct: 7 IDFKQLNFLTKLNENHSGELWKGRWQGNDIVVKVLKVRD------WSTRKSRDFNEECPR 60
Query: 236 LSRLHNPNVIKFVAACKKPPVY--CVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIALDI 293
L +PNV+ + AC+ PP +IT + GSL LH+ + + + + ALD
Sbjct: 61 LRIFSHPNVLPVLGACQSPPAPHPTLITHWXPYGSLYNVLHEGTNFVVDQSQAVKFALDX 120
Query: 294 ARGMEYIHS-QGVIHRD-LKPENVLIDQEFHLKI--ADFGIACEEVYCDALSDDPGTY-- 347
ARG ++H+ + +I R L +V ID++ +I AD + + PG
Sbjct: 121 ARGXAFLHTLEPLIPRHALNSRSVXIDEDXTARISXADVKFSFQS---------PGRXYA 171
Query: 348 -RWMAPEMIKHK---SYGRKVDVYSFGLILWEMVAGTIPYEEMNPIQAAFAVVNKNLRPA 403
W+APE ++ K + R D +SF ++LWE+V +P+ +++ + V + LRP
Sbjct: 172 PAWVAPEALQKKPEDTNRRSADXWSFAVLLWELVTREVPFADLSNXEIGXKVALEGLRPT 231
Query: 404 IPGDCPPAMAALIEQCWSLQPDKRPEFWHIVKVLEQFE 441
IP P ++ L + C + P KRP+F IV +LE+ +
Sbjct: 232 IPPGISPHVSKLXKICXNEDPAKRPKFDXIVPILEKXQ 269
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 75/228 (32%), Positives = 115/228 (50%), Gaps = 26/228 (11%)
Query: 234 ALLSRL-------HNPNVIKFVAACKKP--PVYCVITEYLSEGSLRAYLHKLEHKTLP-- 282
AL+S L H+ NV+ + AC KP P+ VI E+ G+L YL ++ +P
Sbjct: 76 ALMSELKILIHIGHHLNVVNLLGACTKPGGPLM-VIVEFCKFGNLSTYLRSKRNEFVPYK 134
Query: 283 --------LPKLIAIALDIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIACEE 334
L LI + +A+GME++ S+ IHRDL N+L+ ++ +KI DFG+A +
Sbjct: 135 DLYKDFLTLEHLICYSFQVAKGMEFLASRKXIHRDLAARNILLSEKNVVKICDFGLA-RD 193
Query: 335 VYCDALSDDPGTYR----WMAPEMIKHKSYGRKVDVYSFGLILWEMVA-GTIPYEEMNPI 389
+Y D G R WMAPE I + Y + DV+SFG++LWE+ + G PY +
Sbjct: 194 IYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKID 253
Query: 390 QAAFAVVNKNLRPAIPGDCPPAMAALIEQCWSLQPDKRPEFWHIVKVL 437
+ + + R P P M + CW +P +RP F +V+ L
Sbjct: 254 EEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHL 301
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 117/230 (50%), Gaps = 16/230 (6%)
Query: 205 VAVKIIRIPDDDENETLAARLEKQFNREVALLSRLHNPNVIKFVAACKKPPVYCVITEYL 264
VA+K+I+ E+E F E ++ L + +++ C K +ITEY+
Sbjct: 51 VAIKMIKEGSMSEDE---------FIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYM 101
Query: 265 SEGSLRAYLHKLEHKTLPLPKLIAIALDIARGMEYIHSQGVIHRDLKPENVLIDQEFHLK 324
+ G L YL ++ H+ +L+ + D+ MEY+ S+ +HRDL N L++ + +K
Sbjct: 102 ANGCLLNYLREMRHR-FQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVK 160
Query: 325 IADFGIACEEVYCDALSDDPGT---YRWMAPEMIKHKSYGRKVDVYSFGLILWEMVA-GT 380
++DFG++ V D + G+ RW PE++ + + K D+++FG+++WE+ + G
Sbjct: 161 VSDFGLS-RYVLDDEETSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGK 219
Query: 381 IPYEEMNPIQAAFAVVNKNLRPAIPGDCPPAMAALIEQCWSLQPDKRPEF 430
+PYE + A + + LR P + ++ CW + D+RP F
Sbjct: 220 MPYERFTNSETAEHIA-QGLRLYRPHLASEKVYTIMYSCWHEKADERPTF 268
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 77/250 (30%), Positives = 123/250 (49%), Gaps = 24/250 (9%)
Query: 205 VAVKIIR-IPDDDENETLAARLEKQFNREVALLSRL-HNPNVIKFVAACKKPPVYCVITE 262
VAVK+++ DE E L + E+ ++S L + N++ + AC VITE
Sbjct: 79 VAVKMLKSTAHADEKEALMS--------ELKIMSHLGQHENIVNLLGACTHGGPVLVITE 130
Query: 263 YLSEGSL--------RAYLHKLEHKTLPLPKLIAIALDIARGMEYIHSQGVIHRDLKPEN 314
Y G L A L K + + L L L+ + +A+GM ++ S+ IHRD+ N
Sbjct: 131 YCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQVAQGMAFLASKNCIHRDVAARN 190
Query: 315 VLIDQEFHLKIADFGIACEEVYCDALSDDPGTYR----WMAPEMIKHKSYGRKVDVYSFG 370
VL+ KI DFG+A ++ D+ G R WMAPE I Y + DV+S+G
Sbjct: 191 VLLTNGHVAKIGDFGLA-RDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYG 249
Query: 371 LILWEMVA-GTIPYEEMNPIQAAFAVVNKNLRPAIPGDCPPAMAALIEQCWSLQPDKRPE 429
++LWE+ + G PY + + +V + A P P + ++++ CW+L+P RP
Sbjct: 250 ILLWEIFSLGLNPYPGILVNSKFYKLVKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPT 309
Query: 430 FWHIVKVLEQ 439
F I L++
Sbjct: 310 FQQICSFLQE 319
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 76/250 (30%), Positives = 123/250 (49%), Gaps = 24/250 (9%)
Query: 205 VAVKIIR-IPDDDENETLAARLEKQFNREVALLSRL-HNPNVIKFVAACKKPPVYCVITE 262
VAVK+++ DE E L + E+ ++S L + N++ + AC VITE
Sbjct: 71 VAVKMLKSTAHADEKEALMS--------ELKIMSHLGQHENIVNLLGACTHGGPVLVITE 122
Query: 263 YLSEGSLRAYLH--------KLEHKTLPLPKLIAIALDIARGMEYIHSQGVIHRDLKPEN 314
Y G L +L K + + L L L+ + +A+GM ++ S+ IHRD+ N
Sbjct: 123 YCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQVAQGMAFLASKNCIHRDVAARN 182
Query: 315 VLIDQEFHLKIADFGIACEEVYCDALSDDPGTYR----WMAPEMIKHKSYGRKVDVYSFG 370
VL+ KI DFG+A ++ D+ G R WMAPE I Y + DV+S+G
Sbjct: 183 VLLTNGHVAKIGDFGLA-RDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYG 241
Query: 371 LILWEMVA-GTIPYEEMNPIQAAFAVVNKNLRPAIPGDCPPAMAALIEQCWSLQPDKRPE 429
++LWE+ + G PY + + +V + A P P + ++++ CW+L+P RP
Sbjct: 242 ILLWEIFSLGLNPYPGILVNSKFYKLVKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPT 301
Query: 430 FWHIVKVLEQ 439
F I L++
Sbjct: 302 FQQICSFLQE 311
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 109 bits (273), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 75/232 (32%), Positives = 115/232 (49%), Gaps = 30/232 (12%)
Query: 234 ALLSRL-------HNPNVIKFVAACKKP--PVYCVITEYLSEGSLRAYLHKLEHKTLP-- 282
AL+S L H+ NV+ + AC KP P+ VI E+ G+L YL ++ +P
Sbjct: 76 ALMSELKILIHIGHHLNVVNLLGACTKPGGPLM-VIVEFCKFGNLSTYLRSKRNEFVPYK 134
Query: 283 ------------LPKLIAIALDIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGI 330
L LI + +A+GME++ S+ IHRDL N+L+ ++ +KI DFG+
Sbjct: 135 VAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGL 194
Query: 331 ACEEVYCDALSDDPGTYR----WMAPEMIKHKSYGRKVDVYSFGLILWEMVA-GTIPYEE 385
A ++Y D G R WMAPE I + Y + DV+SFG++LWE+ + G PY
Sbjct: 195 A-RDIYKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPG 253
Query: 386 MNPIQAAFAVVNKNLRPAIPGDCPPAMAALIEQCWSLQPDKRPEFWHIVKVL 437
+ + + + R P P M + CW +P +RP F +V+ L
Sbjct: 254 VKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHL 305
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 109 bits (273), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 75/254 (29%), Positives = 123/254 (48%), Gaps = 28/254 (11%)
Query: 205 VAVKIIR-IPDDDENETLAARLEKQFNREVALLSRL-HNPNVIKFVAACKKPPVYCVITE 262
VAVK+++ DE E L + E+ ++S L + N++ + AC VITE
Sbjct: 79 VAVKMLKSTAHADEKEALMS--------ELKIMSHLGQHENIVNLLGACTHGGPVLVITE 130
Query: 263 YLSEGSLRAYLHK------------LEHKTLPLPKLIAIALDIARGMEYIHSQGVIHRDL 310
Y G L +L + + + TL L+ + +A+GM ++ S+ IHRD+
Sbjct: 131 YCCYGDLLNFLRRKSRVLETDPAFAIANSTLSTRDLLHFSSQVAQGMAFLASKNCIHRDV 190
Query: 311 KPENVLIDQEFHLKIADFGIACEEVYCDALSDDPGTYR----WMAPEMIKHKSYGRKVDV 366
NVL+ KI DFG+A ++ D+ G R WMAPE I Y + DV
Sbjct: 191 AARNVLLTNGHVAKIGDFGLA-RDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDV 249
Query: 367 YSFGLILWEMVA-GTIPYEEMNPIQAAFAVVNKNLRPAIPGDCPPAMAALIEQCWSLQPD 425
+S+G++LWE+ + G PY + + +V + A P P + ++++ CW+L+P
Sbjct: 250 WSYGILLWEIFSLGLNPYPGILVNSKFYKLVKDGYQMAQPAFAPKNIYSIMQACWALEPT 309
Query: 426 KRPEFWHIVKVLEQ 439
RP F I L++
Sbjct: 310 HRPTFQQICSFLQE 323
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 109 bits (272), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 75/232 (32%), Positives = 115/232 (49%), Gaps = 30/232 (12%)
Query: 234 ALLSRL-------HNPNVIKFVAACKKP--PVYCVITEYLSEGSLRAYLHKLEHKTLP-- 282
AL+S L H+ NV+ + AC KP P+ VI E+ G+L YL ++ +P
Sbjct: 113 ALMSELKILIHIGHHLNVVNLLGACTKPGGPLM-VIVEFCKFGNLSTYLRSKRNEFVPYK 171
Query: 283 ------------LPKLIAIALDIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGI 330
L LI + +A+GME++ S+ IHRDL N+L+ ++ +KI DFG+
Sbjct: 172 VAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGL 231
Query: 331 ACEEVYCDALSDDPGTYR----WMAPEMIKHKSYGRKVDVYSFGLILWEMVA-GTIPYEE 385
A ++Y D G R WMAPE I + Y + DV+SFG++LWE+ + G PY
Sbjct: 232 A-RDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPG 290
Query: 386 MNPIQAAFAVVNKNLRPAIPGDCPPAMAALIEQCWSLQPDKRPEFWHIVKVL 437
+ + + + R P P M + CW +P +RP F +V+ L
Sbjct: 291 VKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHL 342
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 109 bits (272), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 75/232 (32%), Positives = 115/232 (49%), Gaps = 30/232 (12%)
Query: 234 ALLSRL-------HNPNVIKFVAACKKP--PVYCVITEYLSEGSLRAYLHKLEHKTLP-- 282
AL+S L H+ NV+ + AC KP P+ VI E+ G+L YL ++ +P
Sbjct: 78 ALMSELKILIHIGHHLNVVNLLGACTKPGGPLM-VIVEFCKFGNLSTYLRSKRNEFVPYK 136
Query: 283 ------------LPKLIAIALDIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGI 330
L LI + +A+GME++ S+ IHRDL N+L+ ++ +KI DFG+
Sbjct: 137 EAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGL 196
Query: 331 ACEEVYCDALSDDPGTYR----WMAPEMIKHKSYGRKVDVYSFGLILWEMVA-GTIPYEE 385
A ++Y D G R WMAPE I + Y + DV+SFG++LWE+ + G PY
Sbjct: 197 A-RDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPG 255
Query: 386 MNPIQAAFAVVNKNLRPAIPGDCPPAMAALIEQCWSLQPDKRPEFWHIVKVL 437
+ + + + R P P M + CW +P +RP F +V+ L
Sbjct: 256 VKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHL 307
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 109 bits (272), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 75/232 (32%), Positives = 115/232 (49%), Gaps = 30/232 (12%)
Query: 234 ALLSRL-------HNPNVIKFVAACKKP--PVYCVITEYLSEGSLRAYLHKLEHKTLP-- 282
AL+S L H+ NV+ + AC KP P+ VI E+ G+L YL ++ +P
Sbjct: 76 ALMSELKILIHIGHHLNVVNLLGACTKPGGPLM-VIVEFCKFGNLSTYLRSKRNEFVPYK 134
Query: 283 ------------LPKLIAIALDIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGI 330
L LI + +A+GME++ S+ IHRDL N+L+ ++ +KI DFG+
Sbjct: 135 VAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGL 194
Query: 331 ACEEVYCDALSDDPGTYR----WMAPEMIKHKSYGRKVDVYSFGLILWEMVA-GTIPYEE 385
A ++Y D G R WMAPE I + Y + DV+SFG++LWE+ + G PY
Sbjct: 195 A-RDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPG 253
Query: 386 MNPIQAAFAVVNKNLRPAIPGDCPPAMAALIEQCWSLQPDKRPEFWHIVKVL 437
+ + + + R P P M + CW +P +RP F +V+ L
Sbjct: 254 VKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHL 305
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 109 bits (272), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 75/237 (31%), Positives = 115/237 (48%), Gaps = 40/237 (16%)
Query: 234 ALLSRL-------HNPNVIKFVAACKKP--PVYCVITEYLSEGSLRAYLHKLEHKTLP-- 282
AL+S L H+ NV+ + AC KP P+ VITE+ G+L YL ++ +P
Sbjct: 67 ALMSELKILIHIGHHLNVVNLLGACTKPGGPLM-VITEFCKFGNLSTYLRSKRNEFVPYK 125
Query: 283 ------------LPKLIAIALDIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGI 330
L LI + +A+GME++ S+ IHRDL N+L+ ++ +KI DFG+
Sbjct: 126 VAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGL 185
Query: 331 ACEEVYCDALSDDPGTYR---------WMAPEMIKHKSYGRKVDVYSFGLILWEMVA-GT 380
A + + DP R WMAPE I + Y + DV+SFG++LWE+ + G
Sbjct: 186 ARD------IXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGA 239
Query: 381 IPYEEMNPIQAAFAVVNKNLRPAIPGDCPPAMAALIEQCWSLQPDKRPEFWHIVKVL 437
PY + + + + R P P M + CW +P +RP F +V+ L
Sbjct: 240 SPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHL 296
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 109 bits (272), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 108/218 (49%), Gaps = 18/218 (8%)
Query: 227 KQFNREVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYL--HKLEHKTLP-- 282
+ F RE LL+ L + ++++F C + ++ EY+ G L +L H + K L
Sbjct: 88 QDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGG 147
Query: 283 ---------LPKLIAIALDIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIACE 333
L +L+A+A +A GM Y+ +HRDL N L+ Q +KI DFG++ +
Sbjct: 148 EDVAPGPLGLGQLLAVASQVAAGMVYLAGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRD 207
Query: 334 EVYCDALSDDPGTY---RWMAPEMIKHKSYGRKVDVYSFGLILWEMVA-GTIPYEEMNPI 389
D T RWM PE I ++ + + DV+SFG++LWE+ G P+ +++
Sbjct: 208 IYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNT 267
Query: 390 QAAFAVVNKNLRPAIPGDCPPAMAALIEQCWSLQPDKR 427
+ A + + P CPP + A++ CW +P +R
Sbjct: 268 E-AIDCITQGRELERPRACPPEVYAIMRGCWQREPQQR 304
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 108 bits (271), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 77/261 (29%), Positives = 129/261 (49%), Gaps = 26/261 (9%)
Query: 187 FAHGAHSRLYHGIYKDE------PVAVKIIRIPDDDENETLAARLEKQFNREVALLSRLH 240
GA +Y G++ E PVA+K +R E + + K+ E +++ +
Sbjct: 33 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELR-------EATSPKANKEILDEAYVMASVD 85
Query: 241 NPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHK-TLPLPKLIAIALDIARGMEY 299
NP+V + + C V +IT+ + G L Y+ EHK + L+ + IA+GM Y
Sbjct: 86 NPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVR--EHKDNIGSQYLLNWCVQIAKGMNY 142
Query: 300 IHSQGVIHRDLKPENVLIDQEFHLKIADFGIAC-----EEVYCDALSDDPGTYRWMAPEM 354
+ + ++HRDL NVL+ H+KI DFG+A E+ Y P +WMA E
Sbjct: 143 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP--IKWMALES 200
Query: 355 IKHKSYGRKVDVYSFGLILWE-MVAGTIPYEEMNPIQAAFAVVNKNLRPAIPGDCPPAMA 413
I H+ Y + DV+S+G+ +WE M G+ PY+ + P +++ K R P C +
Sbjct: 201 ILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI-PASEISSILEKGERLPQPPICTIDVY 259
Query: 414 ALIEQCWSLQPDKRPEFWHIV 434
++ +CW + D RP+F ++
Sbjct: 260 MIMRKCWMIDADSRPKFRELI 280
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 108 bits (271), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 108/218 (49%), Gaps = 18/218 (8%)
Query: 227 KQFNREVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYL--HKLEHKTLP-- 282
+ F RE LL+ L + ++++F C + ++ EY+ G L +L H + K L
Sbjct: 59 QDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGG 118
Query: 283 ---------LPKLIAIALDIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIACE 333
L +L+A+A +A GM Y+ +HRDL N L+ Q +KI DFG++ +
Sbjct: 119 EDVAPGPLGLGQLLAVASQVAAGMVYLAGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRD 178
Query: 334 EVYCDALSDDPGTY---RWMAPEMIKHKSYGRKVDVYSFGLILWEMVA-GTIPYEEMNPI 389
D T RWM PE I ++ + + DV+SFG++LWE+ G P+ +++
Sbjct: 179 IYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNT 238
Query: 390 QAAFAVVNKNLRPAIPGDCPPAMAALIEQCWSLQPDKR 427
+ A + + P CPP + A++ CW +P +R
Sbjct: 239 E-AIDCITQGRELERPRACPPEVYAIMRGCWQREPQQR 275
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 108 bits (271), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 77/261 (29%), Positives = 129/261 (49%), Gaps = 26/261 (9%)
Query: 187 FAHGAHSRLYHGIYKDE------PVAVKIIRIPDDDENETLAARLEKQFNREVALLSRLH 240
GA +Y G++ E PVA+K +R E + + K+ E +++ +
Sbjct: 23 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELR-------EATSPKANKEILDEAYVMASVD 75
Query: 241 NPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHK-TLPLPKLIAIALDIARGMEY 299
NP+V + + C V +IT+ + G L Y+ EHK + L+ + IA+GM Y
Sbjct: 76 NPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVR--EHKDNIGSQYLLNWCVQIAKGMNY 132
Query: 300 IHSQGVIHRDLKPENVLIDQEFHLKIADFGIAC-----EEVYCDALSDDPGTYRWMAPEM 354
+ + ++HRDL NVL+ H+KI DFG+A E+ Y P +WMA E
Sbjct: 133 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP--IKWMALES 190
Query: 355 IKHKSYGRKVDVYSFGLILWE-MVAGTIPYEEMNPIQAAFAVVNKNLRPAIPGDCPPAMA 413
I H+ Y + DV+S+G+ +WE M G+ PY+ + P +++ K R P C +
Sbjct: 191 ILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI-PASEISSILEKGERLPQPPICTIDVY 249
Query: 414 ALIEQCWSLQPDKRPEFWHIV 434
++ +CW + D RP+F ++
Sbjct: 250 MIMRKCWMIDADSRPKFRELI 270
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 108 bits (271), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 76/246 (30%), Positives = 125/246 (50%), Gaps = 11/246 (4%)
Query: 191 AHSRLYHGIYKDEPVAVKIIRIPDDDENETLAARLEKQFNREVALLSRLHNPNVIKFVAA 250
A +L I VA+KII D+ + L+K F REV ++ L++PN++K
Sbjct: 26 AKVKLARHILTGREVAIKII-----DKTQLNPTSLQKLF-REVRIMKILNHPNIVKLFEV 79
Query: 251 CKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIALDIARGMEYIHSQGVIHRDL 310
+ +I EY S G + YL + H + + + I ++Y H + ++HRDL
Sbjct: 80 IETEKTLYLIMEYASGGEVFDYL--VAHGRMKEKEARSKFRQIVSAVQYCHQKRIVHRDL 137
Query: 311 KPENVLIDQEFHLKIADFGIACEEVYCDALSDDPGTYRWMAPEMIKHKSY-GRKVDVYSF 369
K EN+L+D + ++KIADFG + E L G+ + APE+ + K Y G +VDV+S
Sbjct: 138 KAENLLLDADMNIKIADFGFSNEFTVGGKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSL 197
Query: 370 GLILWEMVAGTIPYEEMNPIQAAFAVVNKNLRPAIPGDCPPAMAALIEQCWSLQPDKRPE 429
G+IL+ +V+G++P++ N + V+ R IP L+++ L P KR
Sbjct: 198 GVILYTLVSGSLPFDGQNLKELRERVLRGKYR--IPFYMSTDCENLLKRFLVLNPIKRGT 255
Query: 430 FWHIVK 435
I+K
Sbjct: 256 LEQIMK 261
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 108 bits (271), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 108/218 (49%), Gaps = 18/218 (8%)
Query: 227 KQFNREVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYL--HKLEHKTLP-- 282
+ F RE LL+ L + ++++F C + ++ EY+ G L +L H + K L
Sbjct: 65 QDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGG 124
Query: 283 ---------LPKLIAIALDIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIACE 333
L +L+A+A +A GM Y+ +HRDL N L+ Q +KI DFG++ +
Sbjct: 125 EDVAPGPLGLGQLLAVASQVAAGMVYLAGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRD 184
Query: 334 EVYCDALSDDPGTY---RWMAPEMIKHKSYGRKVDVYSFGLILWEMVA-GTIPYEEMNPI 389
D T RWM PE I ++ + + DV+SFG++LWE+ G P+ +++
Sbjct: 185 IYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNT 244
Query: 390 QAAFAVVNKNLRPAIPGDCPPAMAALIEQCWSLQPDKR 427
+ A + + P CPP + A++ CW +P +R
Sbjct: 245 E-AIDCITQGRELERPRACPPEVYAIMRGCWQREPQQR 281
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 108 bits (271), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 62/189 (32%), Positives = 106/189 (56%), Gaps = 6/189 (3%)
Query: 230 NREVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAI 289
N E +LS + +P +I+ + +I +Y+ G L + L K + P+ K A
Sbjct: 54 NDERLMLSIVTHPFIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQRFPNPVAKFYAA 113
Query: 290 ALDIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIACEEVYCDALSDDPGTYRW 349
+ +A +EY+HS+ +I+RDLKPEN+L+D+ H+KI DFG A + D GT +
Sbjct: 114 EVCLA--LEYLHSKDIIYRDLKPENILLDKNGHIKITDFGFA--KYVPDVTYXLCGTPDY 169
Query: 350 MAPEMIKHKSYGRKVDVYSFGLILWEMVAGTIPYEEMNPIQAAFAVVNKNLR--PAIPGD 407
+APE++ K Y + +D +SFG++++EM+AG P+ + N ++ ++N LR P D
Sbjct: 170 IAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKILNAELRFPPFFNED 229
Query: 408 CPPAMAALI 416
++ LI
Sbjct: 230 VKDLLSRLI 238
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 108 bits (270), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 77/261 (29%), Positives = 129/261 (49%), Gaps = 26/261 (9%)
Query: 187 FAHGAHSRLYHGIYKDE------PVAVKIIRIPDDDENETLAARLEKQFNREVALLSRLH 240
GA +Y G++ E PVA+K +R E + + K+ E +++ +
Sbjct: 26 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELR-------EATSPKANKEILDEAYVMASVD 78
Query: 241 NPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHK-TLPLPKLIAIALDIARGMEY 299
NP+V + + C V +IT+ + G L Y+ EHK + L+ + IA+GM Y
Sbjct: 79 NPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVR--EHKDNIGSQYLLNWCVQIAKGMNY 135
Query: 300 IHSQGVIHRDLKPENVLIDQEFHLKIADFGIAC-----EEVYCDALSDDPGTYRWMAPEM 354
+ + ++HRDL NVL+ H+KI DFG+A E+ Y P +WMA E
Sbjct: 136 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP--IKWMALES 193
Query: 355 IKHKSYGRKVDVYSFGLILWE-MVAGTIPYEEMNPIQAAFAVVNKNLRPAIPGDCPPAMA 413
I H+ Y + DV+S+G+ +WE M G+ PY+ + P +++ K R P C +
Sbjct: 194 ILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI-PASEISSILEKGERLPQPPICTIDVY 252
Query: 414 ALIEQCWSLQPDKRPEFWHIV 434
++ +CW + D RP+F ++
Sbjct: 253 MIMRKCWMIDADSRPKFRELI 273
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 108 bits (269), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 77/261 (29%), Positives = 129/261 (49%), Gaps = 26/261 (9%)
Query: 187 FAHGAHSRLYHGIYKDE------PVAVKIIRIPDDDENETLAARLEKQFNREVALLSRLH 240
GA +Y G++ E PVA+K +R E + + K+ E +++ +
Sbjct: 48 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELR-------EATSPKANKEILDEAYVMASVD 100
Query: 241 NPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHK-TLPLPKLIAIALDIARGMEY 299
NP+V + + C V +IT+ + G L Y+ EHK + L+ + IA+GM Y
Sbjct: 101 NPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVR--EHKDNIGSQYLLNWCVQIAKGMNY 157
Query: 300 IHSQGVIHRDLKPENVLIDQEFHLKIADFGIAC-----EEVYCDALSDDPGTYRWMAPEM 354
+ + ++HRDL NVL+ H+KI DFG+A E+ Y P +WMA E
Sbjct: 158 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP--IKWMALES 215
Query: 355 IKHKSYGRKVDVYSFGLILWE-MVAGTIPYEEMNPIQAAFAVVNKNLRPAIPGDCPPAMA 413
I H+ Y + DV+S+G+ +WE M G+ PY+ + P +++ K R P C +
Sbjct: 216 ILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI-PASEISSILEKGERLPQPPICTIDVY 274
Query: 414 ALIEQCWSLQPDKRPEFWHIV 434
++ +CW + D RP+F ++
Sbjct: 275 MIMVKCWMIDADSRPKFRELI 295
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 108 bits (269), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 77/261 (29%), Positives = 130/261 (49%), Gaps = 26/261 (9%)
Query: 187 FAHGAHSRLYHGIYKDE------PVAVKIIRIPDDDENETLAARLEKQFNREVALLSRLH 240
+ GA +Y G++ E PVA+K +R E + + K+ E +++ +
Sbjct: 30 LSSGAFGTVYKGLWIPEGEKVKIPVAIKELR-------EATSPKANKEILDEAYVMASVD 82
Query: 241 NPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHK-TLPLPKLIAIALDIARGMEY 299
NP+V + + C V +IT+ + G L Y+ EHK + L+ + IA+GM Y
Sbjct: 83 NPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVR--EHKDNIGSQYLLNWCVQIAKGMNY 139
Query: 300 IHSQGVIHRDLKPENVLIDQEFHLKIADFGIAC-----EEVYCDALSDDPGTYRWMAPEM 354
+ + ++HRDL NVL+ H+KI DFG+A E+ Y P +WMA E
Sbjct: 140 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP--IKWMALES 197
Query: 355 IKHKSYGRKVDVYSFGLILWE-MVAGTIPYEEMNPIQAAFAVVNKNLRPAIPGDCPPAMA 413
I H+ Y + DV+S+G+ +WE M G+ PY+ + P +++ K R P C +
Sbjct: 198 ILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI-PASEISSILEKGERLPQPPICTIDVY 256
Query: 414 ALIEQCWSLQPDKRPEFWHIV 434
++ +CW + D RP+F ++
Sbjct: 257 MIMVKCWMIDADSRPKFRELI 277
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 108 bits (269), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 107/225 (47%), Gaps = 21/225 (9%)
Query: 217 ENETLAARLEKQFNREVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKL 276
+NE L+ + E ++ +L NP +++ + C+ + ++ E G L YL +
Sbjct: 47 KNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEAES-WMLVMEMAELGPLNKYLQQN 105
Query: 277 EHKTLPLPKLIAIALDIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIACEEVY 336
H + +I + ++ GM+Y+ +HRDL NVL+ + + KI+DFG++
Sbjct: 106 RH--VKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLS----- 158
Query: 337 CDALSDDPGTY----------RWMAPEMIKHKSYGRKVDVYSFGLILWEMVA-GTIPYEE 385
AL D Y +W APE I + + K DV+SFG+++WE + G PY
Sbjct: 159 -KALRADENXYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRG 217
Query: 386 MNPIQAAFAVVNKNLRPAIPGDCPPAMAALIEQCWSLQPDKRPEF 430
M + A++ K R P CP M L+ CW+ + RP F
Sbjct: 218 MKGSEVT-AMLEKGERMGCPAGCPREMYDLMNLCWTYDVENRPGF 261
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 108 bits (269), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 77/261 (29%), Positives = 129/261 (49%), Gaps = 26/261 (9%)
Query: 187 FAHGAHSRLYHGIYKDE------PVAVKIIRIPDDDENETLAARLEKQFNREVALLSRLH 240
GA +Y G++ E PVA+K +R E + + K+ E +++ +
Sbjct: 29 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELR-------EATSPKANKEILDEAYVMASVD 81
Query: 241 NPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHK-TLPLPKLIAIALDIARGMEY 299
NP+V + + C V +IT+ + G L Y+ EHK + L+ + IA+GM Y
Sbjct: 82 NPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVR--EHKDNIGSQYLLNWCVQIAKGMNY 138
Query: 300 IHSQGVIHRDLKPENVLIDQEFHLKIADFGIAC-----EEVYCDALSDDPGTYRWMAPEM 354
+ + ++HRDL NVL+ H+KI DFG+A E+ Y P +WMA E
Sbjct: 139 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP--IKWMALES 196
Query: 355 IKHKSYGRKVDVYSFGLILWE-MVAGTIPYEEMNPIQAAFAVVNKNLRPAIPGDCPPAMA 413
I H+ Y + DV+S+G+ +WE M G+ PY+ + P +++ K R P C +
Sbjct: 197 ILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI-PASEISSILEKGERLPQPPICTIDVY 255
Query: 414 ALIEQCWSLQPDKRPEFWHIV 434
++ +CW + D RP+F ++
Sbjct: 256 MIMVKCWMIDADSRPKFRELI 276
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 108 bits (269), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 77/261 (29%), Positives = 130/261 (49%), Gaps = 26/261 (9%)
Query: 187 FAHGAHSRLYHGIYKDE------PVAVKIIRIPDDDENETLAARLEKQFNREVALLSRLH 240
+ GA +Y G++ E PVA+K +R E + + K+ E +++ +
Sbjct: 23 LSSGAFGTVYKGLWIPEGEKVKIPVAIKELR-------EATSPKANKEILDEAYVMASVD 75
Query: 241 NPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHK-TLPLPKLIAIALDIARGMEY 299
NP+V + + C V +IT+ + G L Y+ EHK + L+ + IA+GM Y
Sbjct: 76 NPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVR--EHKDNIGSQYLLNWCVQIAKGMNY 132
Query: 300 IHSQGVIHRDLKPENVLIDQEFHLKIADFGIAC-----EEVYCDALSDDPGTYRWMAPEM 354
+ + ++HRDL NVL+ H+KI DFG+A E+ Y P +WMA E
Sbjct: 133 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP--IKWMALES 190
Query: 355 IKHKSYGRKVDVYSFGLILWE-MVAGTIPYEEMNPIQAAFAVVNKNLRPAIPGDCPPAMA 413
I H+ Y + DV+S+G+ +WE M G+ PY+ + P +++ K R P C +
Sbjct: 191 ILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI-PASEISSILEKGERLPQPPICTIDVY 249
Query: 414 ALIEQCWSLQPDKRPEFWHIV 434
++ +CW + D RP+F ++
Sbjct: 250 MIMVKCWMIDADSRPKFRELI 270
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 108 bits (269), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 77/261 (29%), Positives = 129/261 (49%), Gaps = 26/261 (9%)
Query: 187 FAHGAHSRLYHGIYKDE------PVAVKIIRIPDDDENETLAARLEKQFNREVALLSRLH 240
GA +Y G++ E PVA+K +R E + + K+ E +++ +
Sbjct: 23 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELR-------EATSPKANKEILDEAYVMASVD 75
Query: 241 NPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHK-TLPLPKLIAIALDIARGMEY 299
NP+V + + C V +IT+ + G L Y+ EHK + L+ + IA+GM Y
Sbjct: 76 NPHVCRLLGICLTSTVQ-LITQLMPFGXLLDYVR--EHKDNIGSQYLLNWCVQIAKGMNY 132
Query: 300 IHSQGVIHRDLKPENVLIDQEFHLKIADFGIAC-----EEVYCDALSDDPGTYRWMAPEM 354
+ + ++HRDL NVL+ H+KI DFG+A E+ Y P +WMA E
Sbjct: 133 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP--IKWMALES 190
Query: 355 IKHKSYGRKVDVYSFGLILWE-MVAGTIPYEEMNPIQAAFAVVNKNLRPAIPGDCPPAMA 413
I H+ Y + DV+S+G+ +WE M G+ PY+ + P +++ K R P C +
Sbjct: 191 ILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI-PASEISSILEKGERLPQPPICTIDVY 249
Query: 414 ALIEQCWSLQPDKRPEFWHIV 434
++ +CW + D RP+F ++
Sbjct: 250 MIMVKCWMIDADSRPKFRELI 270
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 108 bits (269), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 77/261 (29%), Positives = 129/261 (49%), Gaps = 26/261 (9%)
Query: 187 FAHGAHSRLYHGIYKDE------PVAVKIIRIPDDDENETLAARLEKQFNREVALLSRLH 240
GA +Y G++ E PVA+K +R E + + K+ E +++ +
Sbjct: 30 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELR-------EATSPKANKEILDEAYVMASVD 82
Query: 241 NPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHK-TLPLPKLIAIALDIARGMEY 299
NP+V + + C V +IT+ + G L Y+ EHK + L+ + IA+GM Y
Sbjct: 83 NPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVR--EHKDNIGSQYLLNWCVQIAKGMNY 139
Query: 300 IHSQGVIHRDLKPENVLIDQEFHLKIADFGIAC-----EEVYCDALSDDPGTYRWMAPEM 354
+ + ++HRDL NVL+ H+KI DFG+A E+ Y P +WMA E
Sbjct: 140 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP--IKWMALES 197
Query: 355 IKHKSYGRKVDVYSFGLILWE-MVAGTIPYEEMNPIQAAFAVVNKNLRPAIPGDCPPAMA 413
I H+ Y + DV+S+G+ +WE M G+ PY+ + P +++ K R P C +
Sbjct: 198 ILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI-PASEISSILEKGERLPQPPICTIDVY 256
Query: 414 ALIEQCWSLQPDKRPEFWHIV 434
++ +CW + D RP+F ++
Sbjct: 257 MIMVKCWMIDADSRPKFRELI 277
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 108 bits (269), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 77/261 (29%), Positives = 129/261 (49%), Gaps = 26/261 (9%)
Query: 187 FAHGAHSRLYHGIYKDE------PVAVKIIRIPDDDENETLAARLEKQFNREVALLSRLH 240
GA +Y G++ E PVA+K +R E + + K+ E +++ +
Sbjct: 26 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELR-------EATSPKANKEILDEAYVMASVD 78
Query: 241 NPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHK-TLPLPKLIAIALDIARGMEY 299
NP+V + + C V +IT+ + G L Y+ EHK + L+ + IA+GM Y
Sbjct: 79 NPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVR--EHKDNIGSQYLLNWCVQIAKGMNY 135
Query: 300 IHSQGVIHRDLKPENVLIDQEFHLKIADFGIAC-----EEVYCDALSDDPGTYRWMAPEM 354
+ + ++HRDL NVL+ H+KI DFG+A E+ Y P +WMA E
Sbjct: 136 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP--IKWMALES 193
Query: 355 IKHKSYGRKVDVYSFGLILWE-MVAGTIPYEEMNPIQAAFAVVNKNLRPAIPGDCPPAMA 413
I H+ Y + DV+S+G+ +WE M G+ PY+ + P +++ K R P C +
Sbjct: 194 ILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI-PASEISSILEKGERLPQPPICTIDVY 252
Query: 414 ALIEQCWSLQPDKRPEFWHIV 434
++ +CW + D RP+F ++
Sbjct: 253 MIMVKCWMIDADSRPKFRELI 273
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 108 bits (269), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 77/261 (29%), Positives = 129/261 (49%), Gaps = 26/261 (9%)
Query: 187 FAHGAHSRLYHGIYKDE------PVAVKIIRIPDDDENETLAARLEKQFNREVALLSRLH 240
GA +Y G++ E PVA+K +R E + + K+ E +++ +
Sbjct: 26 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELR-------EATSPKANKEILDEAYVMASVD 78
Query: 241 NPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHK-TLPLPKLIAIALDIARGMEY 299
NP+V + + C V +IT+ + G L Y+ EHK + L+ + IA+GM Y
Sbjct: 79 NPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVR--EHKDNIGSQYLLNWCVQIAKGMNY 135
Query: 300 IHSQGVIHRDLKPENVLIDQEFHLKIADFGIAC-----EEVYCDALSDDPGTYRWMAPEM 354
+ + ++HRDL NVL+ H+KI DFG+A E+ Y P +WMA E
Sbjct: 136 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP--IKWMALES 193
Query: 355 IKHKSYGRKVDVYSFGLILWE-MVAGTIPYEEMNPIQAAFAVVNKNLRPAIPGDCPPAMA 413
I H+ Y + DV+S+G+ +WE M G+ PY+ + P +++ K R P C +
Sbjct: 194 ILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI-PASEISSILEKGERLPQPPICTIDVY 252
Query: 414 ALIEQCWSLQPDKRPEFWHIV 434
++ +CW + D RP+F ++
Sbjct: 253 MIMVKCWMIDADSRPKFRELI 273
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 77/261 (29%), Positives = 129/261 (49%), Gaps = 26/261 (9%)
Query: 187 FAHGAHSRLYHGIYKDE------PVAVKIIRIPDDDENETLAARLEKQFNREVALLSRLH 240
GA +Y G++ E PVA+K +R E + + K+ E +++ +
Sbjct: 25 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELR-------EATSPKANKEILDEAYVMASVD 77
Query: 241 NPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHK-TLPLPKLIAIALDIARGMEY 299
NP+V + + C V +IT+ + G L Y+ EHK + L+ + IA+GM Y
Sbjct: 78 NPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVR--EHKDNIGSQYLLNWCVQIAKGMNY 134
Query: 300 IHSQGVIHRDLKPENVLIDQEFHLKIADFGIAC-----EEVYCDALSDDPGTYRWMAPEM 354
+ + ++HRDL NVL+ H+KI DFG+A E+ Y P +WMA E
Sbjct: 135 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP--IKWMALES 192
Query: 355 IKHKSYGRKVDVYSFGLILWE-MVAGTIPYEEMNPIQAAFAVVNKNLRPAIPGDCPPAMA 413
I H+ Y + DV+S+G+ +WE M G+ PY+ + P +++ K R P C +
Sbjct: 193 ILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI-PASEISSILEKGERLPQPPICTIDVY 251
Query: 414 ALIEQCWSLQPDKRPEFWHIV 434
++ +CW + D RP+F ++
Sbjct: 252 MIMVKCWMIDADSRPKFRELI 272
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 77/261 (29%), Positives = 129/261 (49%), Gaps = 26/261 (9%)
Query: 187 FAHGAHSRLYHGIYKDE------PVAVKIIRIPDDDENETLAARLEKQFNREVALLSRLH 240
GA +Y G++ E PVA+K +R E + + K+ E +++ +
Sbjct: 23 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELR-------EATSPKANKEILDEAYVMASVD 75
Query: 241 NPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHK-TLPLPKLIAIALDIARGMEY 299
NP+V + + C V +IT+ + G L Y+ EHK + L+ + IA+GM Y
Sbjct: 76 NPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVR--EHKDNIGSQYLLNWCVQIAKGMNY 132
Query: 300 IHSQGVIHRDLKPENVLIDQEFHLKIADFGIAC-----EEVYCDALSDDPGTYRWMAPEM 354
+ + ++HRDL NVL+ H+KI DFG+A E+ Y P +WMA E
Sbjct: 133 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP--IKWMALES 190
Query: 355 IKHKSYGRKVDVYSFGLILWE-MVAGTIPYEEMNPIQAAFAVVNKNLRPAIPGDCPPAMA 413
I H+ Y + DV+S+G+ +WE M G+ PY+ + P +++ K R P C +
Sbjct: 191 ILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI-PASEISSILEKGERLPQPPICTIDVY 249
Query: 414 ALIEQCWSLQPDKRPEFWHIV 434
++ +CW + D RP+F ++
Sbjct: 250 MIMVKCWMIDADSRPKFRELI 270
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 77/261 (29%), Positives = 129/261 (49%), Gaps = 26/261 (9%)
Query: 187 FAHGAHSRLYHGIYKDE------PVAVKIIRIPDDDENETLAARLEKQFNREVALLSRLH 240
GA +Y G++ E PVA+K +R E + + K+ E +++ +
Sbjct: 17 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELR-------EATSPKANKEILDEAYVMASVD 69
Query: 241 NPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHK-TLPLPKLIAIALDIARGMEY 299
NP+V + + C V +IT+ + G L Y+ EHK + L+ + IA+GM Y
Sbjct: 70 NPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVR--EHKDNIGSQYLLNWCVQIAKGMNY 126
Query: 300 IHSQGVIHRDLKPENVLIDQEFHLKIADFGIAC-----EEVYCDALSDDPGTYRWMAPEM 354
+ + ++HRDL NVL+ H+KI DFG+A E+ Y P +WMA E
Sbjct: 127 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP--IKWMALES 184
Query: 355 IKHKSYGRKVDVYSFGLILWE-MVAGTIPYEEMNPIQAAFAVVNKNLRPAIPGDCPPAMA 413
I H+ Y + DV+S+G+ +WE M G+ PY+ + P +++ K R P C +
Sbjct: 185 ILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI-PASEISSILEKGERLPQPPICTIDVY 243
Query: 414 ALIEQCWSLQPDKRPEFWHIV 434
++ +CW + D RP+F ++
Sbjct: 244 MIMVKCWMIDADSRPKFRELI 264
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 74/254 (29%), Positives = 122/254 (48%), Gaps = 28/254 (11%)
Query: 205 VAVKIIR-IPDDDENETLAARLEKQFNREVALLSRL-HNPNVIKFVAACKKPPVYCVITE 262
VAVK+++ DE E L + E+ ++S L + N++ + AC VITE
Sbjct: 79 VAVKMLKSTAHADEKEALMS--------ELKIMSHLGQHENIVNLLGACTHGGPVLVITE 130
Query: 263 YLSEGSLRAYLHK------------LEHKTLPLPKLIAIALDIARGMEYIHSQGVIHRDL 310
Y G L +L + + + T L+ + +A+GM ++ S+ IHRD+
Sbjct: 131 YCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASKNCIHRDV 190
Query: 311 KPENVLIDQEFHLKIADFGIACEEVYCDALSDDPGTYR----WMAPEMIKHKSYGRKVDV 366
NVL+ KI DFG+A ++ D+ G R WMAPE I Y + DV
Sbjct: 191 AARNVLLTNGHVAKIGDFGLA-RDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDV 249
Query: 367 YSFGLILWEMVA-GTIPYEEMNPIQAAFAVVNKNLRPAIPGDCPPAMAALIEQCWSLQPD 425
+S+G++LWE+ + G PY + + +V + A P P + ++++ CW+L+P
Sbjct: 250 WSYGILLWEIFSLGLNPYPGILVNSKFYKLVKDGYQMAQPAFAPKNIYSIMQACWALEPT 309
Query: 426 KRPEFWHIVKVLEQ 439
RP F I L++
Sbjct: 310 HRPTFQQICSFLQE 323
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 76/246 (30%), Positives = 124/246 (50%), Gaps = 11/246 (4%)
Query: 191 AHSRLYHGIYKDEPVAVKIIRIPDDDENETLAARLEKQFNREVALLSRLHNPNVIKFVAA 250
A +L I VA+KII D+ + L+K F REV ++ L++PN++K
Sbjct: 29 AKVKLARHILTGREVAIKII-----DKTQLNPTSLQKLF-REVRIMKILNHPNIVKLFEV 82
Query: 251 CKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIALDIARGMEYIHSQGVIHRDL 310
+ +I EY S G + YL + H + + + I ++Y H + ++HRDL
Sbjct: 83 IETEKTLYLIMEYASGGEVFDYL--VAHGRMKEKEARSKFRQIVSAVQYCHQKRIVHRDL 140
Query: 311 KPENVLIDQEFHLKIADFGIACEEVYCDALSDDPGTYRWMAPEMIKHKSY-GRKVDVYSF 369
K EN+L+D + ++KIADFG + E L G + APE+ + K Y G +VDV+S
Sbjct: 141 KAENLLLDADMNIKIADFGFSNEFTVGGKLDAFCGAPPYAAPELFQGKKYDGPEVDVWSL 200
Query: 370 GLILWEMVAGTIPYEEMNPIQAAFAVVNKNLRPAIPGDCPPAMAALIEQCWSLQPDKRPE 429
G+IL+ +V+G++P++ N + V+ R IP L+++ L P KR
Sbjct: 201 GVILYTLVSGSLPFDGQNLKELRERVLRGKYR--IPFYMSTDCENLLKRFLVLNPIKRGT 258
Query: 430 FWHIVK 435
I+K
Sbjct: 259 LEQIMK 264
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 74/236 (31%), Positives = 114/236 (48%), Gaps = 39/236 (16%)
Query: 234 ALLSRL-------HNPNVIKFVAACKKP--PVYCVITEYLSEGSLRAYLHKLEHKTLP-- 282
AL+S L H+ NV+ + AC KP P+ VI E+ G+L YL ++ +P
Sbjct: 77 ALMSELKILIHIGHHLNVVNLLGACTKPGGPLM-VIVEFCKFGNLSTYLRSKRNEFVPYK 135
Query: 283 -----------LPKLIAIALDIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIA 331
L LI + +A+GME++ S+ IHRDL N+L+ ++ +KI DFG+A
Sbjct: 136 TPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLA 195
Query: 332 CEEVYCDALSDDPGTYR---------WMAPEMIKHKSYGRKVDVYSFGLILWEMVA-GTI 381
+ + DP R WMAPE I + Y + DV+SFG++LWE+ + G
Sbjct: 196 RD------IXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGAS 249
Query: 382 PYEEMNPIQAAFAVVNKNLRPAIPGDCPPAMAALIEQCWSLQPDKRPEFWHIVKVL 437
PY + + + + R P P M + CW +P +RP F +V+ L
Sbjct: 250 PYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHL 305
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 74/237 (31%), Positives = 114/237 (48%), Gaps = 40/237 (16%)
Query: 234 ALLSRL-------HNPNVIKFVAACKKP--PVYCVITEYLSEGSLRAYLHKLEHKTLP-- 282
AL+S L H+ NV+ + AC KP P+ VI E+ G+L YL ++ +P
Sbjct: 67 ALMSELKILIHIGHHLNVVNLLGACTKPGGPLM-VIVEFCKFGNLSTYLRSKRNEFVPYK 125
Query: 283 ------------LPKLIAIALDIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGI 330
L LI + +A+GME++ S+ IHRDL N+L+ ++ +KI DFG+
Sbjct: 126 VAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGL 185
Query: 331 ACEEVYCDALSDDPGTYR---------WMAPEMIKHKSYGRKVDVYSFGLILWEMVA-GT 380
A + + DP R WMAPE I + Y + DV+SFG++LWE+ + G
Sbjct: 186 ARD------IXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGA 239
Query: 381 IPYEEMNPIQAAFAVVNKNLRPAIPGDCPPAMAALIEQCWSLQPDKRPEFWHIVKVL 437
PY + + + + R P P M + CW +P +RP F +V+ L
Sbjct: 240 SPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHL 296
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 74/235 (31%), Positives = 114/235 (48%), Gaps = 38/235 (16%)
Query: 234 ALLSRL-------HNPNVIKFVAACKKP--PVYCVITEYLSEGSLRAYLHKLEHKTLP-- 282
AL+S L H+ NV+ + AC KP P+ VI E+ G+L YL ++ +P
Sbjct: 78 ALMSELKILIHIGHHLNVVNLLGACTKPGGPLM-VIVEFCKFGNLSTYLRSKRNEFVPYK 136
Query: 283 ----------LPKLIAIALDIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIAC 332
L LI + +A+GME++ S+ IHRDL N+L+ ++ +KI DFG+A
Sbjct: 137 PEDLYKDFLTLEHLIXYSFQVAKGMEFLASRKXIHRDLAARNILLSEKNVVKICDFGLAR 196
Query: 333 EEVYCDALSDDPGTYR---------WMAPEMIKHKSYGRKVDVYSFGLILWEMVA-GTIP 382
+ + DP R WMAPE I + Y + DV+SFG++LWE+ + G P
Sbjct: 197 D------IXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASP 250
Query: 383 YEEMNPIQAAFAVVNKNLRPAIPGDCPPAMAALIEQCWSLQPDKRPEFWHIVKVL 437
Y + + + + R P P M + CW +P +RP F +V+ L
Sbjct: 251 YPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHL 305
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 76/260 (29%), Positives = 127/260 (48%), Gaps = 24/260 (9%)
Query: 187 FAHGAHSRLYHGIYKDE------PVAVKIIRIPDDDENETLAARLEKQFNREVALLSRLH 240
GA +Y G++ E PVA+K +R E + + K+ E +++ +
Sbjct: 25 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELR-------EATSPKANKEILDEAYVMASVD 77
Query: 241 NPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHK-TLPLPKLIAIALDIARGMEY 299
NP+V + + C V +IT+ + G L Y+ EHK + L+ + IA+GM Y
Sbjct: 78 NPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVR--EHKDNIGSQYLLNWCVQIAKGMNY 134
Query: 300 IHSQGVIHRDLKPENVLIDQEFHLKIADFG----IACEEVYCDALSDDPGTYRWMAPEMI 355
+ + ++HRDL NVL+ H+KI DFG + EE A +WMA E I
Sbjct: 135 LEDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHA-EGGKVPIKWMALESI 193
Query: 356 KHKSYGRKVDVYSFGLILWE-MVAGTIPYEEMNPIQAAFAVVNKNLRPAIPGDCPPAMAA 414
H+ Y + DV+S+G+ +WE M G+ PY+ + P +++ K R P C +
Sbjct: 194 LHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI-PASEISSILEKGERLPQPPICTIDVYM 252
Query: 415 LIEQCWSLQPDKRPEFWHIV 434
++ +CW + D RP+F ++
Sbjct: 253 IMRKCWMIDADSRPKFRELI 272
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 74/237 (31%), Positives = 114/237 (48%), Gaps = 40/237 (16%)
Query: 234 ALLSRL-------HNPNVIKFVAACKKP--PVYCVITEYLSEGSLRAYLHKLEHKTLP-- 282
AL+S L H+ NV+ + AC KP P+ VI E+ G+L YL ++ +P
Sbjct: 76 ALMSELKILIHIGHHLNVVNLLGACTKPGGPLM-VIVEFCKFGNLSTYLRSKRNEFVPYK 134
Query: 283 ------------LPKLIAIALDIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGI 330
L LI + +A+GME++ S+ IHRDL N+L+ ++ +KI DFG+
Sbjct: 135 VAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGL 194
Query: 331 ACEEVYCDALSDDPGTYR---------WMAPEMIKHKSYGRKVDVYSFGLILWEMVA-GT 380
A + + DP R WMAPE I + Y + DV+SFG++LWE+ + G
Sbjct: 195 ARD------IXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGA 248
Query: 381 IPYEEMNPIQAAFAVVNKNLRPAIPGDCPPAMAALIEQCWSLQPDKRPEFWHIVKVL 437
PY + + + + R P P M + CW +P +RP F +V+ L
Sbjct: 249 SPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHL 305
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 77/261 (29%), Positives = 128/261 (49%), Gaps = 26/261 (9%)
Query: 187 FAHGAHSRLYHGIYKDE------PVAVKIIRIPDDDENETLAARLEKQFNREVALLSRLH 240
GA +Y G++ E PVA+K +R E + + K+ E +++ +
Sbjct: 20 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELR-------EATSPKANKEILDEAYVMASVD 72
Query: 241 NPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHK-TLPLPKLIAIALDIARGMEY 299
NP+V + + C V +IT+ + G L Y+ EHK + L+ + IA GM Y
Sbjct: 73 NPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVR--EHKDNIGSQYLLNWCVQIAEGMNY 129
Query: 300 IHSQGVIHRDLKPENVLIDQEFHLKIADFGIAC-----EEVYCDALSDDPGTYRWMAPEM 354
+ + ++HRDL NVL+ H+KI DFG+A E+ Y P +WMA E
Sbjct: 130 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP--IKWMALES 187
Query: 355 IKHKSYGRKVDVYSFGLILWE-MVAGTIPYEEMNPIQAAFAVVNKNLRPAIPGDCPPAMA 413
I H+ Y + DV+S+G+ +WE M G+ PY+ + P +++ K R P C +
Sbjct: 188 ILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI-PASEISSILEKGERLPQPPICTIDVY 246
Query: 414 ALIEQCWSLQPDKRPEFWHIV 434
++ +CW + D RP+F ++
Sbjct: 247 MIMVKCWMIDADSRPKFRELI 267
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 75/255 (29%), Positives = 127/255 (49%), Gaps = 14/255 (5%)
Query: 187 FAHGAHSRLYHGIYKDEPVAVKIIRIPDDDENETLAARLEKQFNREVALLSRLHNPNVIK 246
GA +Y G++ E VKI + + E + + K+ E +++ + NP+V +
Sbjct: 57 LGSGAFGTVYKGLWIPEGEKVKI-PVAIMELREATSPKANKEILDEAYVMASVDNPHVCR 115
Query: 247 FVAACKKPPVYCVITEYLSEGSLRAYLHKLEHK-TLPLPKLIAIALDIARGMEYIHSQGV 305
+ C V +IT+ + G L Y+ EHK + L+ + IA+GM Y+ + +
Sbjct: 116 LLGICLTSTVQ-LITQLMPFGCLLDYVR--EHKDNIGSQYLLNWCVQIAKGMNYLEDRRL 172
Query: 306 IHRDLKPENVLIDQEFHLKIADFGIAC-----EEVYCDALSDDPGTYRWMAPEMIKHKSY 360
+HRDL NVL+ H+KI DFG+A E+ Y P +WMA E I H+ Y
Sbjct: 173 VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP--IKWMALESILHRIY 230
Query: 361 GRKVDVYSFGLILWE-MVAGTIPYEEMNPIQAAFAVVNKNLRPAIPGDCPPAMAALIEQC 419
+ DV+S+G+ +WE M G+ PY+ + P +++ K R P C + ++ +C
Sbjct: 231 THQSDVWSYGVTVWELMTFGSKPYDGI-PASEISSILEKGERLPQPPICTIDVYMIMVKC 289
Query: 420 WSLQPDKRPEFWHIV 434
W + D RP+F ++
Sbjct: 290 WMIDADSRPKFRELI 304
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 106 bits (264), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 76/260 (29%), Positives = 127/260 (48%), Gaps = 24/260 (9%)
Query: 187 FAHGAHSRLYHGIYKDE------PVAVKIIRIPDDDENETLAARLEKQFNREVALLSRLH 240
GA +Y G++ E PVA+K +R E + + K+ E +++ +
Sbjct: 23 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELR-------EATSPKANKEILDEAYVMASVD 75
Query: 241 NPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHK-TLPLPKLIAIALDIARGMEY 299
NP+V + + C V +IT+ + G L Y+ EHK + L+ + IA+GM Y
Sbjct: 76 NPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVR--EHKDNIGSQYLLNWCVQIAKGMNY 132
Query: 300 IHSQGVIHRDLKPENVLIDQEFHLKIADFG----IACEEVYCDALSDDPGTYRWMAPEMI 355
+ + ++HRDL NVL+ H+KI DFG + EE A +WMA E I
Sbjct: 133 LEDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHA-EGGKVPIKWMALESI 191
Query: 356 KHKSYGRKVDVYSFGLILWE-MVAGTIPYEEMNPIQAAFAVVNKNLRPAIPGDCPPAMAA 414
H+ Y + DV+S+G+ +WE M G+ PY+ + P +++ K R P C +
Sbjct: 192 LHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI-PASEISSILEKGERLPQPPICTIDVYM 250
Query: 415 LIEQCWSLQPDKRPEFWHIV 434
++ +CW + D RP+F ++
Sbjct: 251 IMVKCWMIDADSRPKFRELI 270
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 106 bits (264), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 76/260 (29%), Positives = 127/260 (48%), Gaps = 24/260 (9%)
Query: 187 FAHGAHSRLYHGIYKDE------PVAVKIIRIPDDDENETLAARLEKQFNREVALLSRLH 240
GA +Y G++ E PVA+K +R E + + K+ E +++ +
Sbjct: 30 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELR-------EATSPKANKEILDEAYVMASVD 82
Query: 241 NPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHK-TLPLPKLIAIALDIARGMEY 299
NP+V + + C V +IT+ + G L Y+ EHK + L+ + IA+GM Y
Sbjct: 83 NPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVR--EHKDNIGSQYLLNWCVQIAKGMNY 139
Query: 300 IHSQGVIHRDLKPENVLIDQEFHLKIADFG----IACEEVYCDALSDDPGTYRWMAPEMI 355
+ + ++HRDL NVL+ H+KI DFG + EE A +WMA E I
Sbjct: 140 LEDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHA-EGGKVPIKWMALESI 198
Query: 356 KHKSYGRKVDVYSFGLILWE-MVAGTIPYEEMNPIQAAFAVVNKNLRPAIPGDCPPAMAA 414
H+ Y + DV+S+G+ +WE M G+ PY+ + P +++ K R P C +
Sbjct: 199 LHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI-PASEISSILEKGERLPQPPICTIDVYM 257
Query: 415 LIEQCWSLQPDKRPEFWHIV 434
++ +CW + D RP+F ++
Sbjct: 258 IMVKCWMIDADSRPKFRELI 277
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 106 bits (264), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 71/252 (28%), Positives = 127/252 (50%), Gaps = 22/252 (8%)
Query: 205 VAVKIIRIPDDDENETLAARLEKQFNREVALLSRLHNPNVIKFVAACKKPPVYCVITEYL 264
VA+K I IP ++ ETL K+F REV S+L + N++ + ++ Y ++ EY+
Sbjct: 39 VAIKAIFIPPREKEETL-----KRFEREVHNSSQLSHQNIVSMIDVDEEDDCYYLVMEYI 93
Query: 265 SEGSLRAYLHKLEHKTLPLPKLIAIALDIARGMEYIHSQGVIHRDLKPENVLIDQEFHLK 324
+L Y+ H L + I I G+++ H ++HRD+KP+N+LID LK
Sbjct: 94 EGPTLSEYIES--HGPLSVDTAINFTNQILDGIKHAHDMRIVHRDIKPQNILIDSNKTLK 151
Query: 325 IADFGI--ACEEVYCDALSDDPGTYRWMAPEMIKHKSYGRKVDVYSFGLILWEMVAGTIP 382
I DFGI A E + GT ++ +PE K ++ D+YS G++L+EM+ G P
Sbjct: 152 IFDFGIAKALSETSLTQTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPP 211
Query: 383 YEEMNPIQAAFAVVNKNLRPAIPG-------DCPPAMAALIEQCWSLQPDKRPEFWHIVK 435
+ + A ++ K+++ ++P D P +++ +I + + DK + I +
Sbjct: 212 FNG----ETAVSIAIKHIQDSVPNVTTDVRKDIPQSLSNVI--LRATEKDKANRYKTIQE 265
Query: 436 VLEQFETSLACN 447
+ + + L N
Sbjct: 266 MKDDLSSVLHEN 277
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 106 bits (264), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 77/284 (27%), Positives = 136/284 (47%), Gaps = 26/284 (9%)
Query: 173 EHTVDLSQLFLGLRFAHGAHSRLYHGIYKDEPVAVKIIRIPDDDENETLAARLEKQFNRE 232
E + QL +G G ++YHG + E VA+++I I D+E++ K F RE
Sbjct: 27 EWDIPFEQLEIGELIGKGRFGQVYHGRWHGE-VAIRLIDIERDNEDQL------KAFKRE 79
Query: 233 VALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIALD 292
V + + NV+ F+ AC PP +IT L +G + + L + K IA +
Sbjct: 80 VMAYRQTRHENVVLFMGACMSPPHLAIITS-LCKGRTLYSVVRDAKIVLDVNKTRQIAQE 138
Query: 293 IARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIACEEVYC------DALSDDPGT 346
I +GM Y+H++G++H+DLK +NV D + I DFG+ D L G
Sbjct: 139 IVKGMGYLHAKGILHKDLKSKNVFYDNG-KVVITDFGLFSISGVLQAGRREDKLRIQNGW 197
Query: 347 YRWMAPEMIKHKS---------YGRKVDVYSFGLILWEMVAGTIPYEEMNPIQAAFAVVN 397
+APE+I+ S + + DV++ G I +E+ A P+ + P +A +
Sbjct: 198 LCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPF-KTQPAEAIIWQMG 256
Query: 398 KNLRPAIPG-DCPPAMAALIEQCWSLQPDKRPEFWHIVKVLEQF 440
++P + ++ ++ CW+ + ++RP F ++ +LE+
Sbjct: 257 TGMKPNLSQIGMGKEISDILLFCWAFEQEERPTFTKLMDMLEKL 300
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 106 bits (264), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 76/261 (29%), Positives = 129/261 (49%), Gaps = 26/261 (9%)
Query: 187 FAHGAHSRLYHGIYKDE------PVAVKIIRIPDDDENETLAARLEKQFNREVALLSRLH 240
+ GA +Y G++ E PVA+K +R E + + K+ E +++ +
Sbjct: 30 LSSGAFGTVYKGLWIPEGEKVKIPVAIKELR-------EATSPKANKEILDEAYVMASVD 82
Query: 241 NPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHK-TLPLPKLIAIALDIARGMEY 299
NP+V + + C V +I + + G L Y+ EHK + L+ + IA+GM Y
Sbjct: 83 NPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVR--EHKDNIGSQYLLNWCVQIAKGMNY 139
Query: 300 IHSQGVIHRDLKPENVLIDQEFHLKIADFGIAC-----EEVYCDALSDDPGTYRWMAPEM 354
+ + ++HRDL NVL+ H+KI DFG+A E+ Y P +WMA E
Sbjct: 140 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP--IKWMALES 197
Query: 355 IKHKSYGRKVDVYSFGLILWE-MVAGTIPYEEMNPIQAAFAVVNKNLRPAIPGDCPPAMA 413
I H+ Y + DV+S+G+ +WE M G+ PY+ + P +++ K R P C +
Sbjct: 198 ILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI-PASEISSILEKGERLPQPPICTIDVY 256
Query: 414 ALIEQCWSLQPDKRPEFWHIV 434
++ +CW + D RP+F ++
Sbjct: 257 MIMVKCWMIDADSRPKFRELI 277
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 106 bits (264), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 81/299 (27%), Positives = 138/299 (46%), Gaps = 41/299 (13%)
Query: 172 DEHTVDLSQLFLGLRFAHGAHSRLYHGIYKDE-----PVAVKIIRIPDDDENETLAARLE 226
++ +D + L LG G + G K E VAVK +++ + + E
Sbjct: 27 EDVVIDRNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREI------ 80
Query: 227 KQFNREVALLSRLHNPNVIKFVAAC-----KKPPVYCVITEYLSEGSLRAYL--HKLEH- 278
++F E A + +PNVI+ + C + P VI ++ G L YL +LE
Sbjct: 81 EEFLSEAACMKDFSHPNVIRLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETG 140
Query: 279 -KTLPLPKLIAIALDIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIACEEVYC 337
K +PL L+ +DIA GMEY+ ++ +HRDL N ++ + + +ADFG++ +++Y
Sbjct: 141 PKHIPLQTLLKFMVDIALGMEYLSNRNFLHRDLAARNCMLRDDMTVCVADFGLS-KKIY- 198
Query: 338 DALSDDPGTY-----------RWMAPEMIKHKSYGRKVDVYSFGLILWEMVA-GTIPYEE 385
G Y +W+A E + + Y K DV++FG+ +WE+ G PY
Sbjct: 199 ------SGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPG 252
Query: 386 MNPIQAAFAVVNKNLRPAIPGDCPPAMAALIEQCWSLQPDKRPEFWHIVKVLEQFETSL 444
+ + +++ + R P DC + ++ CW P RP F + LE+ SL
Sbjct: 253 VQNHEMYDYLLHGH-RLKQPEDCLDELYEIMYSCWRTDPLDRPTFSVLRLQLEKLLESL 310
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 105 bits (263), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 76/261 (29%), Positives = 128/261 (49%), Gaps = 26/261 (9%)
Query: 187 FAHGAHSRLYHGIYKDE------PVAVKIIRIPDDDENETLAARLEKQFNREVALLSRLH 240
GA +Y G++ E PVA+K +R E + + K+ E +++ +
Sbjct: 24 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELR-------EATSPKANKEILDEAYVMASVD 76
Query: 241 NPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHK-TLPLPKLIAIALDIARGMEY 299
NP+V + + C V +I + + G L Y+ EHK + L+ + IA+GM Y
Sbjct: 77 NPHVCRLLGICLTSTVQ-LIMQLMPFGXLLDYVR--EHKDNIGSQYLLNWCVQIAKGMNY 133
Query: 300 IHSQGVIHRDLKPENVLIDQEFHLKIADFGIAC-----EEVYCDALSDDPGTYRWMAPEM 354
+ + ++HRDL NVL+ H+KI DFG+A E+ Y P +WMA E
Sbjct: 134 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP--IKWMALES 191
Query: 355 IKHKSYGRKVDVYSFGLILWE-MVAGTIPYEEMNPIQAAFAVVNKNLRPAIPGDCPPAMA 413
I H+ Y + DV+S+G+ +WE M G+ PY+ + P +++ K R P C +
Sbjct: 192 ILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI-PASEISSILEKGERLPQPPICTIDVY 250
Query: 414 ALIEQCWSLQPDKRPEFWHIV 434
++ +CW + D RP+F ++
Sbjct: 251 MIMVKCWMIDADSRPKFRELI 271
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 105 bits (263), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 76/261 (29%), Positives = 128/261 (49%), Gaps = 26/261 (9%)
Query: 187 FAHGAHSRLYHGIYKDE------PVAVKIIRIPDDDENETLAARLEKQFNREVALLSRLH 240
GA +Y G++ E PVA+K +R E + + K+ E +++ +
Sbjct: 27 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELR-------EATSPKANKEILDEAYVMASVD 79
Query: 241 NPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHK-TLPLPKLIAIALDIARGMEY 299
NP+V + + C V +I + + G L Y+ EHK + L+ + IA+GM Y
Sbjct: 80 NPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVR--EHKDNIGSQYLLNWCVQIAKGMNY 136
Query: 300 IHSQGVIHRDLKPENVLIDQEFHLKIADFGIAC-----EEVYCDALSDDPGTYRWMAPEM 354
+ + ++HRDL NVL+ H+KI DFG+A E+ Y P +WMA E
Sbjct: 137 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP--IKWMALES 194
Query: 355 IKHKSYGRKVDVYSFGLILWE-MVAGTIPYEEMNPIQAAFAVVNKNLRPAIPGDCPPAMA 413
I H+ Y + DV+S+G+ +WE M G+ PY+ + P +++ K R P C +
Sbjct: 195 ILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI-PASEISSILEKGERLPQPPICTIDVY 253
Query: 414 ALIEQCWSLQPDKRPEFWHIV 434
++ +CW + D RP+F ++
Sbjct: 254 MIMVKCWMIDADSRPKFRELI 274
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 105 bits (263), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 76/261 (29%), Positives = 128/261 (49%), Gaps = 26/261 (9%)
Query: 187 FAHGAHSRLYHGIYKDE------PVAVKIIRIPDDDENETLAARLEKQFNREVALLSRLH 240
GA +Y G++ E PVA+K +R E + + K+ E +++ +
Sbjct: 26 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELR-------EATSPKANKEILDEAYVMASVD 78
Query: 241 NPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHK-TLPLPKLIAIALDIARGMEY 299
NP+V + + C V +I + + G L Y+ EHK + L+ + IA+GM Y
Sbjct: 79 NPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVR--EHKDNIGSQYLLNWCVQIAKGMNY 135
Query: 300 IHSQGVIHRDLKPENVLIDQEFHLKIADFGIAC-----EEVYCDALSDDPGTYRWMAPEM 354
+ + ++HRDL NVL+ H+KI DFG+A E+ Y P +WMA E
Sbjct: 136 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP--IKWMALES 193
Query: 355 IKHKSYGRKVDVYSFGLILWE-MVAGTIPYEEMNPIQAAFAVVNKNLRPAIPGDCPPAMA 413
I H+ Y + DV+S+G+ +WE M G+ PY+ + P +++ K R P C +
Sbjct: 194 ILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI-PASEISSILEKGERLPQPPICTIDVY 252
Query: 414 ALIEQCWSLQPDKRPEFWHIV 434
++ +CW + D RP+F ++
Sbjct: 253 MIMVKCWMIDADSRPKFRELI 273
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 105 bits (263), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 76/261 (29%), Positives = 128/261 (49%), Gaps = 26/261 (9%)
Query: 187 FAHGAHSRLYHGIYKDE------PVAVKIIRIPDDDENETLAARLEKQFNREVALLSRLH 240
GA +Y G++ E PVA+K +R E + + K+ E +++ +
Sbjct: 24 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELR-------EATSPKANKEILDEAYVMASVD 76
Query: 241 NPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHK-TLPLPKLIAIALDIARGMEY 299
NP+V + + C V +I + + G L Y+ EHK + L+ + IA+GM Y
Sbjct: 77 NPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVR--EHKDNIGSQYLLNWCVQIAKGMNY 133
Query: 300 IHSQGVIHRDLKPENVLIDQEFHLKIADFGIAC-----EEVYCDALSDDPGTYRWMAPEM 354
+ + ++HRDL NVL+ H+KI DFG+A E+ Y P +WMA E
Sbjct: 134 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP--IKWMALES 191
Query: 355 IKHKSYGRKVDVYSFGLILWE-MVAGTIPYEEMNPIQAAFAVVNKNLRPAIPGDCPPAMA 413
I H+ Y + DV+S+G+ +WE M G+ PY+ + P +++ K R P C +
Sbjct: 192 ILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI-PASEISSILEKGERLPQPPICTIDVY 250
Query: 414 ALIEQCWSLQPDKRPEFWHIV 434
++ +CW + D RP+F ++
Sbjct: 251 MIMVKCWMIDADSRPKFRELI 271
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 105 bits (263), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 76/261 (29%), Positives = 128/261 (49%), Gaps = 26/261 (9%)
Query: 187 FAHGAHSRLYHGIYKDE------PVAVKIIRIPDDDENETLAARLEKQFNREVALLSRLH 240
GA +Y G++ E PVA+K +R E + + K+ E +++ +
Sbjct: 25 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELR-------EATSPKANKEILDEAYVMASVD 77
Query: 241 NPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHK-TLPLPKLIAIALDIARGMEY 299
NP+V + + C V +I + + G L Y+ EHK + L+ + IA+GM Y
Sbjct: 78 NPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVR--EHKDNIGSQYLLNWCVQIAKGMNY 134
Query: 300 IHSQGVIHRDLKPENVLIDQEFHLKIADFGIAC-----EEVYCDALSDDPGTYRWMAPEM 354
+ + ++HRDL NVL+ H+KI DFG+A E+ Y P +WMA E
Sbjct: 135 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP--IKWMALES 192
Query: 355 IKHKSYGRKVDVYSFGLILWE-MVAGTIPYEEMNPIQAAFAVVNKNLRPAIPGDCPPAMA 413
I H+ Y + DV+S+G+ +WE M G+ PY+ + P +++ K R P C +
Sbjct: 193 ILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI-PASEISSILEKGERLPQPPICTIDVY 251
Query: 414 ALIEQCWSLQPDKRPEFWHIV 434
++ +CW + D RP+F ++
Sbjct: 252 MIMVKCWMIDADSRPKFRELI 272
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 105 bits (263), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 83/297 (27%), Positives = 136/297 (45%), Gaps = 29/297 (9%)
Query: 180 QLFLGLRFAHGAHSRLYHGIYKDE-----PVAVKIIRIPDDDENETLAARLEKQFNREVA 234
Q LG G + K E VAVK+++ + +A+ ++F RE A
Sbjct: 24 QFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLK------ADIIASSDIEEFLREAA 77
Query: 235 LLSRLHNPNVIKFVA------ACKKPPVYCVITEYLSEGSLRAYL--HKLEHK--TLPLP 284
+ +P+V K V A + P+ VI ++ G L A+L ++ LPL
Sbjct: 78 CMKEFDHPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQ 137
Query: 285 KLIAIALDIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIACEEVYCDALSDDP 344
L+ +DIA GMEY+ S+ IHRDL N ++ ++ + +ADFG++ + D
Sbjct: 138 TLVRFMVDIACGMEYLSSRNFIHRDLAARNCMLAEDMTVCVADFGLSRKIYSGDYYRQGC 197
Query: 345 GT---YRWMAPEMIKHKSYGRKVDVYSFGLILWE-MVAGTIPYEEMNPIQAAFAVVNKNL 400
+ +W+A E + Y DV++FG+ +WE M G PY + + ++ N
Sbjct: 198 ASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIENAEIYNYLIGGN- 256
Query: 401 RPAIPGDCPPAMAALIEQCWSLQPDKRPEFWHIVKVLEQFETSLACNGTLNLVQNPI 457
R P +C + L+ QCWS P +RP F + LE L+ L+ Q+P+
Sbjct: 257 RLKQPPECMEEVYDLMYQCWSADPKQRPSFTCLRMELENILGHLS---VLSTSQDPL 310
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 105 bits (263), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 76/261 (29%), Positives = 128/261 (49%), Gaps = 26/261 (9%)
Query: 187 FAHGAHSRLYHGIYKDE------PVAVKIIRIPDDDENETLAARLEKQFNREVALLSRLH 240
GA +Y G++ E PVA+K +R E + + K+ E +++ +
Sbjct: 23 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELR-------EATSPKANKEILDEAYVMASVD 75
Query: 241 NPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHK-TLPLPKLIAIALDIARGMEY 299
NP+V + + C V +I + + G L Y+ EHK + L+ + IA+GM Y
Sbjct: 76 NPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVR--EHKDNIGSQYLLNWCVQIAKGMNY 132
Query: 300 IHSQGVIHRDLKPENVLIDQEFHLKIADFGIAC-----EEVYCDALSDDPGTYRWMAPEM 354
+ + ++HRDL NVL+ H+KI DFG+A E+ Y P +WMA E
Sbjct: 133 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP--IKWMALES 190
Query: 355 IKHKSYGRKVDVYSFGLILWE-MVAGTIPYEEMNPIQAAFAVVNKNLRPAIPGDCPPAMA 413
I H+ Y + DV+S+G+ +WE M G+ PY+ + P +++ K R P C +
Sbjct: 191 ILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI-PASEISSILEKGERLPQPPICTIDVY 249
Query: 414 ALIEQCWSLQPDKRPEFWHIV 434
++ +CW + D RP+F ++
Sbjct: 250 MIMVKCWMIDADSRPKFRELI 270
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 105 bits (263), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 87/291 (29%), Positives = 140/291 (48%), Gaps = 39/291 (13%)
Query: 179 SQLFLGLRFAHGAHSRLY----HGIYKDEP---VAVKIIRIPDDDENETLAARLEKQFNR 231
++L G GA ++ +G+ K + VAVK+++ P E +
Sbjct: 23 NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLK-PSAHLTE------REALMS 75
Query: 232 EVALLSRLHN-PNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHK-----LEHKTLP--- 282
E+ +LS L N N++ + AC VITEY G L +L + + KT P
Sbjct: 76 ELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIM 135
Query: 283 --------LPKLIAIALDIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIACEE 334
L L++ + +A+GM ++ S+ IHRDL N+L+ KI DFG+A +
Sbjct: 136 EDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLA-RD 194
Query: 335 VYCDALSDDPGTYR----WMAPEMIKHKSYGRKVDVYSFGLILWEMVA-GTIPYEEMNPI 389
+ D+ G R WMAPE I + Y + DV+S+G+ LWE+ + G+ PY M P+
Sbjct: 195 IKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGM-PV 253
Query: 390 QAAF-AVVNKNLRPAIPGDCPPAMAALIEQCWSLQPDKRPEFWHIVKVLEQ 439
+ F ++ + R P P M +++ CW P KRP F IV+++E+
Sbjct: 254 DSKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEK 304
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 105 bits (263), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 65/198 (32%), Positives = 109/198 (55%), Gaps = 9/198 (4%)
Query: 191 AHSRLYHGIYKDEPVAVKIIRIPDDDENETLAARLEKQFNREVALLSRLHNPNVIKFVAA 250
A +L + VAVKII D+ + L+K F REV ++ L++PN++K
Sbjct: 29 AKVKLARHVLTGREVAVKII-----DKTQLNPTSLQKLF-REVRIMKILNHPNIVKLFEV 82
Query: 251 CKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIALDIARGMEYIHSQGVIHRDL 310
+ ++ EY S G + YL + H + + A I ++Y H + ++HRDL
Sbjct: 83 IETEKTLYLVMEYASGGEVFDYL--VAHGRMKEKEARAKFRQIVSAVQYCHQKYIVHRDL 140
Query: 311 KPENVLIDQEFHLKIADFGIACEEVYCDALSDDPGTYRWMAPEMIKHKSY-GRKVDVYSF 369
K EN+L+D + ++KIADFG + E + L G+ + APE+ + K Y G +VDV+S
Sbjct: 141 KAENLLLDGDMNIKIADFGFSNEFTVGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSL 200
Query: 370 GLILWEMVAGTIPYEEMN 387
G+IL+ +V+G++P++ N
Sbjct: 201 GVILYTLVSGSLPFDGQN 218
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 105 bits (262), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 74/291 (25%), Positives = 134/291 (46%), Gaps = 16/291 (5%)
Query: 187 FAHGAHSRLYHGIYKDEPVAVKIIRIPDDDENETLAARLEKQFNREVALLSRLHNPNVIK 246
HGA +Y G P +++ E + + E F E ++S+L++ N+++
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQNIVR 98
Query: 247 FVAACKKPPVYCVITEYLSEGSLRAYLHKLEHK-----TLPLPKLIAIALDIARGMEYIH 301
+ + ++ E ++ G L+++L + + +L + L+ +A DIA G +Y+
Sbjct: 99 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 158
Query: 302 SQGVIHRDLKPENVLIDQEFH---LKIADFGIACEEVYCDALSDDPGT----YRWMAPEM 354
IHRD+ N L+ KI DFG+A ++Y + G +WM PE
Sbjct: 159 ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMA-RDIYRASYYRKGGCAMLPVKWMPPEA 217
Query: 355 IKHKSYGRKVDVYSFGLILWEMVA-GTIPYEEMNPIQAAFAVVNKNLRPAIPGDCPPAMA 413
+ K D +SFG++LWE+ + G +PY + Q V R P +CP +
Sbjct: 218 FMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSN-QEVLEFVTSGGRMDPPKNCPGPVY 276
Query: 414 ALIEQCWSLQPDKRPEFWHIVKVLEQF-ETSLACNGTLNLVQNPICQDHKK 463
++ QCW QP+ RP F I++ +E + N L + P+ ++ +K
Sbjct: 277 RIMTQCWQHQPEDRPNFAIILERIEYCTQDPDVINTALPIEYGPLVEEEEK 327
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 105 bits (262), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 76/256 (29%), Positives = 124/256 (48%), Gaps = 30/256 (11%)
Query: 205 VAVKIIR-IPDDDENETLAARLEKQFNREVALLSRL-HNPNVIKFVAACKKPPVYCVITE 262
VAVK+++ DE E L + E+ ++S L + N++ + AC VITE
Sbjct: 79 VAVKMLKSTAHADEKEALMS--------ELKIMSHLGQHENIVNLLGACTHGGPVLVITE 130
Query: 263 YLSEGSLRAYLHK-----LEH---------KTLPLPKLIAIALDIARGMEYIHSQGVIHR 308
Y G L +L + LE+ + L L+ + +A+GM ++ S+ IHR
Sbjct: 131 YCCYGDLLNFLRRKRPPGLEYSYNPSHNPEEQLSSRDLLHFSSQVAQGMAFLASKNCIHR 190
Query: 309 DLKPENVLIDQEFHLKIADFGIACEEVYCDALSDDPGTYR----WMAPEMIKHKSYGRKV 364
D+ NVL+ KI DFG+A ++ D+ G R WMAPE I Y +
Sbjct: 191 DVAARNVLLTNGHVAKIGDFGLA-RDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQS 249
Query: 365 DVYSFGLILWEMVA-GTIPYEEMNPIQAAFAVVNKNLRPAIPGDCPPAMAALIEQCWSLQ 423
DV+S+G++LWE+ + G PY + + +V + A P P + ++++ CW+L+
Sbjct: 250 DVWSYGILLWEIFSLGLNPYPGILVNSKFYKLVKDGYQMAQPAFAPKNIYSIMQACWALE 309
Query: 424 PDKRPEFWHIVKVLEQ 439
P RP F I L++
Sbjct: 310 PTHRPTFQQICSFLQE 325
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 105 bits (262), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 87/291 (29%), Positives = 140/291 (48%), Gaps = 39/291 (13%)
Query: 179 SQLFLGLRFAHGAHSRLY----HGIYKDEP---VAVKIIRIPDDDENETLAARLEKQFNR 231
++L G GA ++ +G+ K + VAVK+++ P E +
Sbjct: 39 NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLK-PSAHLTE------REALMS 91
Query: 232 EVALLSRLHN-PNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHK-----LEHKTLP--- 282
E+ +LS L N N++ + AC VITEY G L +L + + KT P
Sbjct: 92 ELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIM 151
Query: 283 --------LPKLIAIALDIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIACEE 334
L L++ + +A+GM ++ S+ IHRDL N+L+ KI DFG+A +
Sbjct: 152 EDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLA-RD 210
Query: 335 VYCDALSDDPGTYR----WMAPEMIKHKSYGRKVDVYSFGLILWEMVA-GTIPYEEMNPI 389
+ D+ G R WMAPE I + Y + DV+S+G+ LWE+ + G+ PY M P+
Sbjct: 211 IKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGM-PV 269
Query: 390 QAAF-AVVNKNLRPAIPGDCPPAMAALIEQCWSLQPDKRPEFWHIVKVLEQ 439
+ F ++ + R P P M +++ CW P KRP F IV+++E+
Sbjct: 270 DSKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEK 320
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 105 bits (262), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 75/260 (28%), Positives = 126/260 (48%), Gaps = 24/260 (9%)
Query: 187 FAHGAHSRLYHGIYKDE------PVAVKIIRIPDDDENETLAARLEKQFNREVALLSRLH 240
GA +Y G++ E PVA+K +R E + + K+ E +++ +
Sbjct: 25 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELR-------EATSPKANKEILDEAYVMASVD 77
Query: 241 NPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHK-TLPLPKLIAIALDIARGMEY 299
NP+V + + C V +I + + G L Y+ EHK + L+ + IA+GM Y
Sbjct: 78 NPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVR--EHKDNIGSQYLLNWCVQIAKGMNY 134
Query: 300 IHSQGVIHRDLKPENVLIDQEFHLKIADFG----IACEEVYCDALSDDPGTYRWMAPEMI 355
+ + ++HRDL NVL+ H+KI DFG + EE A +WMA E I
Sbjct: 135 LEDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHA-EGGKVPIKWMALESI 193
Query: 356 KHKSYGRKVDVYSFGLILWE-MVAGTIPYEEMNPIQAAFAVVNKNLRPAIPGDCPPAMAA 414
H+ Y + DV+S+G+ +WE M G+ PY+ + P +++ K R P C +
Sbjct: 194 LHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI-PASEISSILEKGERLPQPPICTIDVYM 252
Query: 415 LIEQCWSLQPDKRPEFWHIV 434
++ +CW + D RP+F ++
Sbjct: 253 IMRKCWMIDADSRPKFRELI 272
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 105 bits (261), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 73/291 (25%), Positives = 134/291 (46%), Gaps = 16/291 (5%)
Query: 187 FAHGAHSRLYHGIYKDEPVAVKIIRIPDDDENETLAARLEKQFNREVALLSRLHNPNVIK 246
HGA +Y G P +++ E + + E F E ++S+ ++ N+++
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 98
Query: 247 FVAACKKPPVYCVITEYLSEGSLRAYLHKLEHK-----TLPLPKLIAIALDIARGMEYIH 301
+ + ++ E ++ G L+++L + + +L + L+ +A DIA G +Y+
Sbjct: 99 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 158
Query: 302 SQGVIHRDLKPENVLIDQEFH---LKIADFGIACEEVYCDALSDDPGT----YRWMAPEM 354
IHRD+ N L+ KI DFG+A +++Y + G +WM PE
Sbjct: 159 ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMA-QDIYRASYYRKGGCAMLPVKWMPPEA 217
Query: 355 IKHKSYGRKVDVYSFGLILWEMVA-GTIPYEEMNPIQAAFAVVNKNLRPAIPGDCPPAMA 413
+ K D +SFG++LWE+ + G +PY + Q V R P +CP +
Sbjct: 218 FMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSN-QEVLEFVTSGGRMDPPKNCPGPVY 276
Query: 414 ALIEQCWSLQPDKRPEFWHIVKVLEQF-ETSLACNGTLNLVQNPICQDHKK 463
++ QCW QP+ RP F I++ +E + N L + P+ ++ +K
Sbjct: 277 RIMTQCWQHQPEDRPNFAIILERIEYCTQDPDVINTALPIEYGPLVEEEEK 327
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 105 bits (261), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 70/265 (26%), Positives = 124/265 (46%), Gaps = 15/265 (5%)
Query: 187 FAHGAHSRLYHGIYKDEPVAVKIIRIPDDDENETLAARLEKQFNREVALLSRLHNPNVIK 246
HGA +Y G P +++ E + + E F E ++S+L++ N+++
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQNIVR 112
Query: 247 FVAACKKPPVYCVITEYLSEGSLRAYLHKLEHK-----TLPLPKLIAIALDIARGMEYIH 301
+ + ++ E ++ G L+++L + + +L + L+ +A DIA G +Y+
Sbjct: 113 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 172
Query: 302 SQGVIHRDLKPENVLIDQEFH---LKIADFGIACEEVYCDALSDDPGT----YRWMAPEM 354
IHRD+ N L+ KI DFG+A ++Y + G +WM PE
Sbjct: 173 ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMA-RDIYRASYYRKGGCAMLPVKWMPPEA 231
Query: 355 IKHKSYGRKVDVYSFGLILWEMVA-GTIPYEEMNPIQAAFAVVNKNLRPAIPGDCPPAMA 413
+ K D +SFG++LWE+ + G +PY + Q V R P +CP +
Sbjct: 232 FMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSN-QEVLEFVTSGGRMDPPKNCPGPVY 290
Query: 414 ALIEQCWSLQPDKRPEFWHIVKVLE 438
++ QCW QP+ RP F I++ +E
Sbjct: 291 RIMTQCWQHQPEDRPNFAIILERIE 315
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 105 bits (261), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 87/291 (29%), Positives = 140/291 (48%), Gaps = 39/291 (13%)
Query: 179 SQLFLGLRFAHGAHSRLY----HGIYKDEP---VAVKIIRIPDDDENETLAARLEKQFNR 231
++L G GA ++ +G+ K + VAVK+++ P E +
Sbjct: 46 NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLK-PSAHLTE------REALMS 98
Query: 232 EVALLSRLHN-PNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHK-----LEHKTLP--- 282
E+ +LS L N N++ + AC VITEY G L +L + + KT P
Sbjct: 99 ELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIM 158
Query: 283 --------LPKLIAIALDIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIACEE 334
L L++ + +A+GM ++ S+ IHRDL N+L+ KI DFG+A +
Sbjct: 159 EDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLA-RD 217
Query: 335 VYCDALSDDPGTYR----WMAPEMIKHKSYGRKVDVYSFGLILWEMVA-GTIPYEEMNPI 389
+ D+ G R WMAPE I + Y + DV+S+G+ LWE+ + G+ PY M P+
Sbjct: 218 IKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGM-PV 276
Query: 390 QAAF-AVVNKNLRPAIPGDCPPAMAALIEQCWSLQPDKRPEFWHIVKVLEQ 439
+ F ++ + R P P M +++ CW P KRP F IV+++E+
Sbjct: 277 DSKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEK 327
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 105 bits (261), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 72/284 (25%), Positives = 131/284 (46%), Gaps = 21/284 (7%)
Query: 173 EHTVDLSQLFLGLRFAHGAHSRLYHGIY---KDEPVAVKIIRIPDDDENETLAARLEKQF 229
++ + + L G +Y G+Y K E + V + D + +++F
Sbjct: 18 QYGIAREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDN-----KEKF 72
Query: 230 NREVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAI 289
E ++ L +P+++K + ++ P + +I E G L YL + +L + L+
Sbjct: 73 MSEAVIMKNLDHPHIVKLIGIIEEEPTW-IIMELYPYGELGHYLER-NKNSLKVLTLVLY 130
Query: 290 ALDIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFG----IACEEVYCDALSDDPG 345
+L I + M Y+ S +HRD+ N+L+ +K+ DFG I E+ Y +++ P
Sbjct: 131 SLQICKAMAYLESINCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLP- 189
Query: 346 TYRWMAPEMIKHKSYGRKVDVYSFGLILWEMVA-GTIPYEEMNPIQAAFAVVNKNLRPAI 404
+WM+PE I + + DV+ F + +WE+++ G P+ + + V+ K R
Sbjct: 190 -IKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLEN-KDVIGVLEKGDRLPK 247
Query: 405 PGDCPPAMAALIEQCWSLQPDKRPEFWHIVKVLE---QFETSLA 445
P CPP + L+ +CW P RP F +V L Q E +A
Sbjct: 248 PDLCPPVLYTLMTRCWDYDPSDRPRFTELVCSLSDVYQMEKDIA 291
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 105 bits (261), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 87/291 (29%), Positives = 140/291 (48%), Gaps = 39/291 (13%)
Query: 179 SQLFLGLRFAHGAHSRLY----HGIYKDEP---VAVKIIRIPDDDENETLAARLEKQFNR 231
++L G GA ++ +G+ K + VAVK+++ P E +
Sbjct: 41 NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLK-PSAHLTE------REALMS 93
Query: 232 EVALLSRLHN-PNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHK-----LEHKTLP--- 282
E+ +LS L N N++ + AC VITEY G L +L + + KT P
Sbjct: 94 ELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIM 153
Query: 283 --------LPKLIAIALDIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIACEE 334
L L++ + +A+GM ++ S+ IHRDL N+L+ KI DFG+A +
Sbjct: 154 EDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLA-RD 212
Query: 335 VYCDALSDDPGTYR----WMAPEMIKHKSYGRKVDVYSFGLILWEMVA-GTIPYEEMNPI 389
+ D+ G R WMAPE I + Y + DV+S+G+ LWE+ + G+ PY M P+
Sbjct: 213 IKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGM-PV 271
Query: 390 QAAF-AVVNKNLRPAIPGDCPPAMAALIEQCWSLQPDKRPEFWHIVKVLEQ 439
+ F ++ + R P P M +++ CW P KRP F IV+++E+
Sbjct: 272 DSKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEK 322
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 105 bits (261), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 87/364 (23%), Positives = 156/364 (42%), Gaps = 25/364 (6%)
Query: 114 LYKQPQQETKASSNSYSTSPLRHLGSLRVTERYKSRKESAWTKYFDHGGVRVNAVDAADE 173
+Y++ QE +A SP L LR + + T Y + +D
Sbjct: 1 VYRRKHQELQAMQMELQ-SPEYKLSKLRTS--------TIMTDYNPNYSFAGKTSSISDL 51
Query: 174 HTVDLSQLFLGLRFAHGAHSRLYHGIYKDEPVAVKIIRIPDDDENETLAARLEKQFNREV 233
V + L HGA +Y G P +++ E + + E F E
Sbjct: 52 KEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEA 111
Query: 234 ALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHK-----TLPLPKLIA 288
++S+ ++ N+++ + + ++ E ++ G L+++L + + +L + L+
Sbjct: 112 LIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLH 171
Query: 289 IALDIARGMEYIHSQGVIHRDLKPENVLIDQEFH---LKIADFGIACEEVYCDALSDDPG 345
+A DIA G +Y+ IHRD+ N L+ KI DFG+A ++Y + G
Sbjct: 172 VARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMA-RDIYRASYYRKGG 230
Query: 346 T----YRWMAPEMIKHKSYGRKVDVYSFGLILWEMVA-GTIPYEEMNPIQAAFAVVNKNL 400
+WM PE + K D +SFG++LWE+ + G +PY + Q V
Sbjct: 231 CAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSN-QEVLEFVTSGG 289
Query: 401 RPAIPGDCPPAMAALIEQCWSLQPDKRPEFWHIVKVLEQF-ETSLACNGTLNLVQNPICQ 459
R P +CP + ++ QCW QP+ RP F I++ +E + N L + P+ +
Sbjct: 290 RMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQDPDVINTALPIEYGPLVE 349
Query: 460 DHKK 463
+ +K
Sbjct: 350 EEEK 353
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 105 bits (261), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 80/331 (24%), Positives = 144/331 (43%), Gaps = 16/331 (4%)
Query: 147 KSRKESAWTKYFDHGGVRVNAVDAADEHTVDLSQLFLGLRFAHGAHSRLYHGIYKDEPVA 206
K R + T Y + +D V + L HGA +Y G P
Sbjct: 5 KLRTSTIMTDYNPNYSFAGKTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPND 64
Query: 207 VKIIRIPDDDENETLAARLEKQFNREVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSE 266
+++ E + + E F E ++S+ ++ N+++ + + ++ E ++
Sbjct: 65 PSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAG 124
Query: 267 GSLRAYLHKLEHK-----TLPLPKLIAIALDIARGMEYIHSQGVIHRDLKPENVLIDQEF 321
G L+++L + + +L + L+ +A DIA G +Y+ IHRD+ N L+
Sbjct: 125 GDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPG 184
Query: 322 H---LKIADFGIACEEVYCDALSDDPGT----YRWMAPEMIKHKSYGRKVDVYSFGLILW 374
KI DFG+A ++Y + G +WM PE + K D +SFG++LW
Sbjct: 185 PGRVAKIGDFGMA-RDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLW 243
Query: 375 EMVA-GTIPYEEMNPIQAAFAVVNKNLRPAIPGDCPPAMAALIEQCWSLQPDKRPEFWHI 433
E+ + G +PY + Q V R P +CP + ++ QCW QP+ RP F I
Sbjct: 244 EIFSLGYMPYPSKSN-QEVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAII 302
Query: 434 VKVLEQF-ETSLACNGTLNLVQNPICQDHKK 463
++ +E + N L + P+ ++ +K
Sbjct: 303 LERIEYCTQDPDVINTALPIEYGPLVEEEEK 333
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 104 bits (260), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 70/232 (30%), Positives = 124/232 (53%), Gaps = 19/232 (8%)
Query: 202 DEPVAVKIIR----IPDDDENETLAARLEKQFNREVALLSRLHNPNVIKFVAACKKPPVY 257
DE AVKI++ I DDD T+ + + L++LH + +
Sbjct: 366 DELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLH--------SCFQTMDRL 417
Query: 258 CVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIALDIARGMEYIHSQGVIHRDLKPENVLI 317
+ EY++ G L ++ ++ P + A +IA G+ ++ S+G+I+RDLK +NV++
Sbjct: 418 YFVMEYVNGGDLMYHIQQVGR--FKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVML 475
Query: 318 DQEFHLKIADFGIACEEVYCDALSDDP--GTYRWMAPEMIKHKSYGRKVDVYSFGLILWE 375
D E H+KIADFG+ C+E D ++ GT ++APE+I ++ YG+ VD ++FG++L+E
Sbjct: 476 DSEGHIKIADFGM-CKENIWDGVTTKXFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYE 534
Query: 376 MVAGTIPYEEMNPIQAAFAVVNKNLRPAIPGDCPPAMAALIEQCWSLQPDKR 427
M+AG P+E + + +++ N+ A P A+ + + P KR
Sbjct: 535 MLAGQAPFEGEDEDELFQSIMEHNV--AYPKSMSKEAVAICKGLMTKHPGKR 584
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 104 bits (260), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 71/270 (26%), Positives = 126/270 (46%), Gaps = 21/270 (7%)
Query: 187 FAHGAHSRLYHGIY---KDEPVAVKIIRIPDDDENETLAARLEKQFNREVALLSRLHNPN 243
G +Y G+Y K E + V + D + +++F E ++ L +P+
Sbjct: 20 LGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDN-----KEKFMSEAVIMKNLDHPH 74
Query: 244 VIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIALDIARGMEYIHSQ 303
++K + ++ P + +I E G L YL + +L + L+ +L I + M Y+ S
Sbjct: 75 IVKLIGIIEEEPTW-IIMELYPYGELGHYLER-NKNSLKVLTLVLYSLQICKAMAYLESI 132
Query: 304 GVIHRDLKPENVLIDQEFHLKIADFG----IACEEVYCDALSDDPGTYRWMAPEMIKHKS 359
+HRD+ N+L+ +K+ DFG I E+ Y +++ P +WM+PE I +
Sbjct: 133 NCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLP--IKWMSPESINFRR 190
Query: 360 YGRKVDVYSFGLILWEMVA-GTIPYEEMNPIQAAFAVVNKNLRPAIPGDCPPAMAALIEQ 418
+ DV+ F + +WE+++ G P+ + + V+ K R P CPP + L+ +
Sbjct: 191 FTTASDVWMFAVCMWEILSFGKQPFFWLEN-KDVIGVLEKGDRLPKPDLCPPVLYTLMTR 249
Query: 419 CWSLQPDKRPEFWHIVKVLE---QFETSLA 445
CW P RP F +V L Q E +A
Sbjct: 250 CWDYDPSDRPRFTELVCSLSDVYQMEKDIA 279
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 104 bits (260), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 76/263 (28%), Positives = 123/263 (46%), Gaps = 37/263 (14%)
Query: 205 VAVKIIR-IPDDDENETLAARLEKQFNREVALLSRL-HNPNVIKFVAACKKPPVYCVITE 262
VAVK+++ DE E L + E+ ++S L + N++ + AC VITE
Sbjct: 64 VAVKMLKSTAHADEKEALMS--------ELKIMSHLGQHENIVNLLGACTHGGPVLVITE 115
Query: 263 YLSEGSLRAYLH---------------------KLEHKTLPLPKLIAIALDIARGMEYIH 301
Y G L +L K + + L L L+ + +A+GM ++
Sbjct: 116 YCCYGDLLNFLRRKAEAMLGPSLAPGQDPEGLDKEDGRPLELRDLLHFSSQVAQGMAFLA 175
Query: 302 SQGVIHRDLKPENVLIDQEFHLKIADFGIACEEVYCDALSDDPGTYR----WMAPEMIKH 357
S+ IHRD+ NVL+ KI DFG+A ++ D+ G R WMAPE I
Sbjct: 176 SKNCIHRDVAARNVLLTNGHVAKIGDFGLA-RDIMNDSNYIVKGNARLPVKWMAPESIFD 234
Query: 358 KSYGRKVDVYSFGLILWEMVA-GTIPYEEMNPIQAAFAVVNKNLRPAIPGDCPPAMAALI 416
Y + DV+S+G++LWE+ + G PY + + +V + A P P + +++
Sbjct: 235 CVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKLVKDGYQMAQPAFAPKNIYSIM 294
Query: 417 EQCWSLQPDKRPEFWHIVKVLEQ 439
+ CW+L+P RP F I L++
Sbjct: 295 QACWALEPTHRPTFQQICSFLQE 317
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 70/246 (28%), Positives = 115/246 (46%), Gaps = 34/246 (13%)
Query: 227 KQFNREVALLSRLHNPNVIKFVAACKKPPV--YCVITEYLSEGSLRAYLHKLEHKTLPLP 284
+ F RE+ +L L + N++K+ C +I EYL GSLR YL K + + +
Sbjct: 56 RDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHI- 114
Query: 285 KLIAIALDIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIACEEVYCDALSDDP 344
KL+ I +GMEY+ ++ IHRDL N+L++ E +KI DFG+ L D
Sbjct: 115 KLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLT------KVLPQDK 168
Query: 345 GTYR----------WMAPEMIKHKSYGRKVDVYSFGLILWEMV-----AGTIPYEEM--- 386
++ W APE + + DV+SFG++L+E+ + + P E M
Sbjct: 169 EFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMI 228
Query: 387 -NPIQAAFAV------VNKNLRPAIPGDCPPAMAALIEQCWSLQPDKRPEFWHIVKVLEQ 439
N Q V + N R P CP + ++ +CW+ ++RP F + ++Q
Sbjct: 229 GNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQ 288
Query: 440 FETSLA 445
++A
Sbjct: 289 IRDNMA 294
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 70/246 (28%), Positives = 115/246 (46%), Gaps = 34/246 (13%)
Query: 227 KQFNREVALLSRLHNPNVIKFVAACKKPPVYCV--ITEYLSEGSLRAYLHKLEHKTLPLP 284
+ F RE+ +L L + N++K+ C + I EYL GSLR YL K + + +
Sbjct: 57 RDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHI- 115
Query: 285 KLIAIALDIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIACEEVYCDALSDDP 344
KL+ I +GMEY+ ++ IHR+L N+L++ E +KI DFG+ L D
Sbjct: 116 KLLQYTSQICKGMEYLGTKRYIHRNLATRNILVENENRVKIGDFGLT------KVLPQDK 169
Query: 345 GTYR----------WMAPEMIKHKSYGRKVDVYSFGLILWEMV-----AGTIPYEEM--- 386
Y+ W APE + + DV+SFG++L+E+ + + P E M
Sbjct: 170 EYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMI 229
Query: 387 -NPIQAAFAV------VNKNLRPAIPGDCPPAMAALIEQCWSLQPDKRPEFWHIVKVLEQ 439
N Q V + N R P CP + ++ +CW+ ++RP F + ++Q
Sbjct: 230 GNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQ 289
Query: 440 FETSLA 445
++A
Sbjct: 290 IRDNMA 295
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 73/272 (26%), Positives = 129/272 (47%), Gaps = 25/272 (9%)
Query: 187 FAHGAHSRLYHGIYKDEP-----VAVKIIRIPDDDENETLAARLEKQFNREVALLSRLHN 241
G +Y G+Y + VAVK + ++ TL + ++F E ++ L +
Sbjct: 16 LGEGFFGEVYEGVYTNHKGEKINVAVKTCK-----KDCTLDNK--EKFMSEAVIMKNLDH 68
Query: 242 PNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIALDIARGMEYIH 301
P+++K + ++ P + +I E G L YL + +L + L+ +L I + M Y+
Sbjct: 69 PHIVKLIGIIEEEPTW-IIMELYPYGELGHYLER-NKNSLKVLTLVLYSLQICKAMAYLE 126
Query: 302 SQGVIHRDLKPENVLIDQEFHLKIADFG----IACEEVYCDALSDDPGTYRWMAPEMIKH 357
S +HRD+ N+L+ +K+ DFG I E+ Y +++ P +WM+PE I
Sbjct: 127 SINCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLP--IKWMSPESINF 184
Query: 358 KSYGRKVDVYSFGLILWEMVA-GTIPYEEMNPIQAAFAVVNKNLRPAIPGDCPPAMAALI 416
+ + DV+ F + +WE+++ G P+ + + V+ K R P CPP + L+
Sbjct: 185 RRFTTASDVWMFAVCMWEILSFGKQPFFWLEN-KDVIGVLEKGDRLPKPDLCPPVLYTLM 243
Query: 417 EQCWSLQPDKRPEFWHIVKVLE---QFETSLA 445
+CW P RP F +V L Q E +A
Sbjct: 244 TRCWDYDPSDRPRFTELVCSLSDVYQMEKDIA 275
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 76/305 (24%), Positives = 133/305 (43%), Gaps = 15/305 (4%)
Query: 147 KSRKESAWTKYFDHGGVRVNAVDAADEHTVDLSQLFLGLRFAHGAHSRLYHGIYKDEPVA 206
K R + T Y + +D V + L HGA +Y G P
Sbjct: 39 KLRTSTIMTDYNPNYCFAGKTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPND 98
Query: 207 VKIIRIPDDDENETLAARLEKQFNREVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSE 266
+++ E + + E F E ++S+ ++ N+++ + + ++ E ++
Sbjct: 99 PSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAG 158
Query: 267 GSLRAYLHKLEHK-----TLPLPKLIAIALDIARGMEYIHSQGVIHRDLKPENVLIDQEF 321
G L+++L + + +L + L+ +A DIA G +Y+ IHRD+ N L+
Sbjct: 159 GDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPG 218
Query: 322 H---LKIADFGIACEEVYCDALSDDPGT----YRWMAPEMIKHKSYGRKVDVYSFGLILW 374
KI DFG+A ++Y G +WM PE + K D +SFG++LW
Sbjct: 219 PGRVAKIGDFGMA-RDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLW 277
Query: 375 EMVA-GTIPYEEMNPIQAAFAVVNKNLRPAIPGDCPPAMAALIEQCWSLQPDKRPEFWHI 433
E+ + G +PY + Q V R P +CP + ++ QCW QP+ RP F I
Sbjct: 278 EIFSLGYMPYPSKSN-QEVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAII 336
Query: 434 VKVLE 438
++ +E
Sbjct: 337 LERIE 341
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 73/291 (25%), Positives = 133/291 (45%), Gaps = 16/291 (5%)
Query: 187 FAHGAHSRLYHGIYKDEPVAVKIIRIPDDDENETLAARLEKQFNREVALLSRLHNPNVIK 246
HGA +Y G P +++ E + + E F E ++S+ ++ N+++
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 98
Query: 247 FVAACKKPPVYCVITEYLSEGSLRAYLHKLEHK-----TLPLPKLIAIALDIARGMEYIH 301
+ + ++ E ++ G L+++L + + +L + L+ +A DIA G +Y+
Sbjct: 99 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 158
Query: 302 SQGVIHRDLKPENVLIDQEFH---LKIADFGIACEEVYCDALSDDPGT----YRWMAPEM 354
IHRD+ N L+ KI DFG+A ++Y + G +WM PE
Sbjct: 159 ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMA-RDIYRASYYRKGGCAMLPVKWMPPEA 217
Query: 355 IKHKSYGRKVDVYSFGLILWEMVA-GTIPYEEMNPIQAAFAVVNKNLRPAIPGDCPPAMA 413
+ K D +SFG++LWE+ + G +PY + Q V R P +CP +
Sbjct: 218 FMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSN-QEVLEFVTSGGRMDPPKNCPGPVY 276
Query: 414 ALIEQCWSLQPDKRPEFWHIVKVLEQF-ETSLACNGTLNLVQNPICQDHKK 463
++ QCW QP+ RP F I++ +E + N L + P+ ++ +K
Sbjct: 277 RIMTQCWQHQPEDRPNFAIILERIEYCTQDPDVINTALPIEYGPLVEEEEK 327
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 75/260 (28%), Positives = 126/260 (48%), Gaps = 24/260 (9%)
Query: 187 FAHGAHSRLYHGIYKDE------PVAVKIIRIPDDDENETLAARLEKQFNREVALLSRLH 240
GA +Y G++ E PVA+K +R E + + K+ E +++ +
Sbjct: 25 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELR-------EATSPKANKEILDEAYVMASVD 77
Query: 241 NPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHK-TLPLPKLIAIALDIARGMEY 299
NP+V + + C V +I + + G L Y+ EHK + L+ + IA+GM Y
Sbjct: 78 NPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVR--EHKDNIGSQYLLNWCVQIAKGMNY 134
Query: 300 IHSQGVIHRDLKPENVLIDQEFHLKIADFG----IACEEVYCDALSDDPGTYRWMAPEMI 355
+ + ++HRDL NVL+ H+KI DFG + EE A +WMA E I
Sbjct: 135 LEDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHA-EGGKVPIKWMALESI 193
Query: 356 KHKSYGRKVDVYSFGLILWE-MVAGTIPYEEMNPIQAAFAVVNKNLRPAIPGDCPPAMAA 414
H+ Y + DV+S+G+ +WE M G+ PY+ + P +++ K R P C +
Sbjct: 194 LHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI-PASEISSILEKGERLPQPPICTIDVYM 252
Query: 415 LIEQCWSLQPDKRPEFWHIV 434
++ +CW + D RP+F ++
Sbjct: 253 IMVKCWMIDADSRPKFRELI 272
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 87/291 (29%), Positives = 139/291 (47%), Gaps = 39/291 (13%)
Query: 179 SQLFLGLRFAHGAHSRLY----HGIYKDEP---VAVKIIRIPDDDENETLAARLEKQFNR 231
++L G GA ++ +G+ K + VAVK+++ P E +
Sbjct: 46 NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLK-PSAHLTE------REALMS 98
Query: 232 EVALLSRLHN-PNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHK-----LEHKTLP--- 282
E+ +LS L N N++ + AC VITEY G L +L + + KT P
Sbjct: 99 ELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIM 158
Query: 283 --------LPKLIAIALDIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIACEE 334
L L++ + +A+GM ++ S+ IHRDL N+L+ KI DFG+A
Sbjct: 159 EDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLA-RH 217
Query: 335 VYCDALSDDPGTYR----WMAPEMIKHKSYGRKVDVYSFGLILWEMVA-GTIPYEEMNPI 389
+ D+ G R WMAPE I + Y + DV+S+G+ LWE+ + G+ PY M P+
Sbjct: 218 IKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGM-PV 276
Query: 390 QAAF-AVVNKNLRPAIPGDCPPAMAALIEQCWSLQPDKRPEFWHIVKVLEQ 439
+ F ++ + R P P M +++ CW P KRP F IV+++E+
Sbjct: 277 DSKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEK 327
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 76/305 (24%), Positives = 134/305 (43%), Gaps = 15/305 (4%)
Query: 147 KSRKESAWTKYFDHGGVRVNAVDAADEHTVDLSQLFLGLRFAHGAHSRLYHGIYKDEPVA 206
K R + T Y + +D V + L HGA +Y G P
Sbjct: 15 KLRTSTIMTDYNPNYCFAGKTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPND 74
Query: 207 VKIIRIPDDDENETLAARLEKQFNREVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSE 266
+++ E + + E F E ++S+ ++ N+++ + + ++ E ++
Sbjct: 75 PSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAG 134
Query: 267 GSLRAYLHKLEHK-----TLPLPKLIAIALDIARGMEYIHSQGVIHRDLKPENVLIDQEF 321
G L+++L + + +L + L+ +A DIA G +Y+ IHRD+ N L+
Sbjct: 135 GDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPG 194
Query: 322 H---LKIADFGIACEEVYCDALSDDPGT----YRWMAPEMIKHKSYGRKVDVYSFGLILW 374
KI DFG+A ++Y + G +WM PE + K D +SFG++LW
Sbjct: 195 PGRVAKIGDFGMA-RDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLW 253
Query: 375 EMVA-GTIPYEEMNPIQAAFAVVNKNLRPAIPGDCPPAMAALIEQCWSLQPDKRPEFWHI 433
E+ + G +PY + Q V R P +CP + ++ QCW QP+ RP F I
Sbjct: 254 EIFSLGYMPYPSKSN-QEVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAII 312
Query: 434 VKVLE 438
++ +E
Sbjct: 313 LERIE 317
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 70/232 (30%), Positives = 124/232 (53%), Gaps = 19/232 (8%)
Query: 202 DEPVAVKIIR----IPDDDENETLAARLEKQFNREVALLSRLHNPNVIKFVAACKKPPVY 257
DE AVKI++ I DDD T+ + + L++LH + +
Sbjct: 45 DELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLH--------SCFQTMDRL 96
Query: 258 CVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIALDIARGMEYIHSQGVIHRDLKPENVLI 317
+ EY++ G L ++ ++ P + A +IA G+ ++ S+G+I+RDLK +NV++
Sbjct: 97 YFVMEYVNGGDLMYHIQQVGR--FKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVML 154
Query: 318 DQEFHLKIADFGIACEEVYCDALSDDP--GTYRWMAPEMIKHKSYGRKVDVYSFGLILWE 375
D E H+KIADFG+ C+E D ++ GT ++APE+I ++ YG+ VD ++FG++L+E
Sbjct: 155 DSEGHIKIADFGM-CKENIWDGVTTKXFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYE 213
Query: 376 MVAGTIPYEEMNPIQAAFAVVNKNLRPAIPGDCPPAMAALIEQCWSLQPDKR 427
M+AG P+E + + +++ N+ A P A+ + + P KR
Sbjct: 214 MLAGQAPFEGEDEDELFQSIMEHNV--AYPKSMSKEAVAICKGLMTKHPGKR 263
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 76/305 (24%), Positives = 133/305 (43%), Gaps = 15/305 (4%)
Query: 147 KSRKESAWTKYFDHGGVRVNAVDAADEHTVDLSQLFLGLRFAHGAHSRLYHGIYKDEPVA 206
K R + T Y + +D V + L HGA +Y G P
Sbjct: 16 KLRTSTIMTDYNPNYCFAGKTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPND 75
Query: 207 VKIIRIPDDDENETLAARLEKQFNREVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSE 266
+++ E + + E F E ++S+ ++ N+++ + + ++ E ++
Sbjct: 76 PSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAG 135
Query: 267 GSLRAYLHKLEHK-----TLPLPKLIAIALDIARGMEYIHSQGVIHRDLKPENVLIDQEF 321
G L+++L + + +L + L+ +A DIA G +Y+ IHRD+ N L+
Sbjct: 136 GDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPG 195
Query: 322 H---LKIADFGIACEEVYCDALSDDPGT----YRWMAPEMIKHKSYGRKVDVYSFGLILW 374
KI DFG+A ++Y G +WM PE + K D +SFG++LW
Sbjct: 196 PGRVAKIGDFGMA-RDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLW 254
Query: 375 EMVA-GTIPYEEMNPIQAAFAVVNKNLRPAIPGDCPPAMAALIEQCWSLQPDKRPEFWHI 433
E+ + G +PY + Q V R P +CP + ++ QCW QP+ RP F I
Sbjct: 255 EIFSLGYMPYPSKSN-QEVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAII 313
Query: 434 VKVLE 438
++ +E
Sbjct: 314 LERIE 318
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 69/265 (26%), Positives = 123/265 (46%), Gaps = 15/265 (5%)
Query: 187 FAHGAHSRLYHGIYKDEPVAVKIIRIPDDDENETLAARLEKQFNREVALLSRLHNPNVIK 246
HGA +Y G P +++ E + + E F E ++S+ ++ N+++
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 112
Query: 247 FVAACKKPPVYCVITEYLSEGSLRAYLHKLEHK-----TLPLPKLIAIALDIARGMEYIH 301
+ + ++ E ++ G L+++L + + +L + L+ +A DIA G +Y+
Sbjct: 113 CIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 172
Query: 302 SQGVIHRDLKPENVLIDQEFH---LKIADFGIACEEVYCDALSDDPGT----YRWMAPEM 354
IHRD+ N L+ KI DFG+A ++Y + G +WM PE
Sbjct: 173 ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMA-RDIYRASYYRKGGCAMLPVKWMPPEA 231
Query: 355 IKHKSYGRKVDVYSFGLILWEMVA-GTIPYEEMNPIQAAFAVVNKNLRPAIPGDCPPAMA 413
+ K D +SFG++LWE+ + G +PY + Q V R P +CP +
Sbjct: 232 FMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSN-QEVLEFVTSGGRMDPPKNCPGPVY 290
Query: 414 ALIEQCWSLQPDKRPEFWHIVKVLE 438
++ QCW QP+ RP F I++ +E
Sbjct: 291 RIMTQCWQHQPEDRPNFAIILERIE 315
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 70/240 (29%), Positives = 115/240 (47%), Gaps = 22/240 (9%)
Query: 227 KQFNREVALLSRLHNPNVIKFVAACKKPPVYCV--ITEYLSEGSLRAYLHKLEHKTLPLP 284
+ F RE+ +L L + N++K+ C + I EYL GSLR YL K + + +
Sbjct: 63 RDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHI- 121
Query: 285 KLIAIALDIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIA--CEEVYCDALSD 342
KL+ I +GMEY+ ++ IHRDL N+L++ E +KI DFG+ +
Sbjct: 122 KLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVK 181
Query: 343 DPGT--YRWMAPEMIKHKSYGRKVDVYSFGLILWEMV-----AGTIPYEEM----NPIQA 391
+PG W APE + + DV+SFG++L+E+ + + P E M N Q
Sbjct: 182 EPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQG 241
Query: 392 AFAV------VNKNLRPAIPGDCPPAMAALIEQCWSLQPDKRPEFWHIVKVLEQFETSLA 445
V + N R P CP + ++ +CW+ ++RP F + ++Q ++A
Sbjct: 242 QMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDNMA 301
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 75/260 (28%), Positives = 126/260 (48%), Gaps = 24/260 (9%)
Query: 187 FAHGAHSRLYHGIYKDE------PVAVKIIRIPDDDENETLAARLEKQFNREVALLSRLH 240
GA +Y G++ E PVA+K +R E + + K+ E +++ +
Sbjct: 27 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELR-------EATSPKANKEILDEAYVMASVD 79
Query: 241 NPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHK-TLPLPKLIAIALDIARGMEY 299
NP+V + + C V +I + + G L Y+ EHK + L+ + IA+GM Y
Sbjct: 80 NPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVR--EHKDNIGSQYLLNWCVQIAKGMNY 136
Query: 300 IHSQGVIHRDLKPENVLIDQEFHLKIADFG----IACEEVYCDALSDDPGTYRWMAPEMI 355
+ + ++HRDL NVL+ H+KI DFG + EE A +WMA E I
Sbjct: 137 LEDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHA-EGGKVPIKWMALESI 195
Query: 356 KHKSYGRKVDVYSFGLILWE-MVAGTIPYEEMNPIQAAFAVVNKNLRPAIPGDCPPAMAA 414
H+ Y + DV+S+G+ +WE M G+ PY+ + P +++ K R P C +
Sbjct: 196 LHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI-PASEISSILEKGERLPQPPICTIDVYM 254
Query: 415 LIEQCWSLQPDKRPEFWHIV 434
++ +CW + D RP+F ++
Sbjct: 255 IMVKCWMIDADSRPKFRELI 274
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 70/227 (30%), Positives = 111/227 (48%), Gaps = 25/227 (11%)
Query: 226 EKQFNREVALLSRLHNPNVIKFVAACKKP--PVYCVITEYLSEGSLRAYLHKLEHKTLPL 283
++ F RE+ +L LH+ ++K+ P P ++ EYL G LR +L + L
Sbjct: 52 QRDFQREIQILKALHSDFIVKYRGVSYGPGRPELRLVMEYLPSGCLRDFLQR-HRARLDA 110
Query: 284 PKLIAIALDIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIACEEVYCD---AL 340
+L+ + I +GMEY+ S+ +HRDL N+L++ E H+KIADFG+A + + D +
Sbjct: 111 SRLLLYSSQICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLA-KLLPLDKDXXV 169
Query: 341 SDDPGT--YRWMAPEMIKHKSYGRKVDVYSFGLILWEMVA----GTIPYEEMNPIQAAFA 394
+PG W APE + + R+ DV+SFG++L+E+ P E +
Sbjct: 170 VREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCER 229
Query: 395 VVNKNLR-----------PAIPGDCPPAMAALIEQCWSLQPDKRPEF 430
V R PA P CP + L++ CW+ P RP F
Sbjct: 230 DVPALCRLLELLEEGQRLPAPPA-CPAEVHELMKLCWAPSPQDRPSF 275
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 69/265 (26%), Positives = 123/265 (46%), Gaps = 15/265 (5%)
Query: 187 FAHGAHSRLYHGIYKDEPVAVKIIRIPDDDENETLAARLEKQFNREVALLSRLHNPNVIK 246
HGA +Y G P +++ E + + E F E ++S+ ++ N+++
Sbjct: 38 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 97
Query: 247 FVAACKKPPVYCVITEYLSEGSLRAYLHKLEHK-----TLPLPKLIAIALDIARGMEYIH 301
+ + ++ E ++ G L+++L + + +L + L+ +A DIA G +Y+
Sbjct: 98 CIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 157
Query: 302 SQGVIHRDLKPENVLIDQEFH---LKIADFGIACEEVYCDALSDDPGT----YRWMAPEM 354
IHRD+ N L+ KI DFG+A ++Y + G +WM PE
Sbjct: 158 ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMA-RDIYRASYYRKGGCAMLPVKWMPPEA 216
Query: 355 IKHKSYGRKVDVYSFGLILWEMVA-GTIPYEEMNPIQAAFAVVNKNLRPAIPGDCPPAMA 413
+ K D +SFG++LWE+ + G +PY + Q V R P +CP +
Sbjct: 217 FMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSN-QEVLEFVTSGGRMDPPKNCPGPVY 275
Query: 414 ALIEQCWSLQPDKRPEFWHIVKVLE 438
++ QCW QP+ RP F I++ +E
Sbjct: 276 RIMTQCWQHQPEDRPNFAIILERIE 300
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 69/265 (26%), Positives = 123/265 (46%), Gaps = 15/265 (5%)
Query: 187 FAHGAHSRLYHGIYKDEPVAVKIIRIPDDDENETLAARLEKQFNREVALLSRLHNPNVIK 246
HGA +Y G P +++ E + + E F E ++S+ ++ N+++
Sbjct: 30 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 89
Query: 247 FVAACKKPPVYCVITEYLSEGSLRAYLHKLEHK-----TLPLPKLIAIALDIARGMEYIH 301
+ + ++ E ++ G L+++L + + +L + L+ +A DIA G +Y+
Sbjct: 90 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 149
Query: 302 SQGVIHRDLKPENVLIDQEFH---LKIADFGIACEEVYCDALSDDPGT----YRWMAPEM 354
IHRD+ N L+ KI DFG+A ++Y + G +WM PE
Sbjct: 150 ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMA-RDIYRASYYRKGGCAMLPVKWMPPEA 208
Query: 355 IKHKSYGRKVDVYSFGLILWEMVA-GTIPYEEMNPIQAAFAVVNKNLRPAIPGDCPPAMA 413
+ K D +SFG++LWE+ + G +PY + Q V R P +CP +
Sbjct: 209 FMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSN-QEVLEFVTSGGRMDPPKNCPGPVY 267
Query: 414 ALIEQCWSLQPDKRPEFWHIVKVLE 438
++ QCW QP+ RP F I++ +E
Sbjct: 268 RIMTQCWQHQPEDRPNFAIILERIE 292
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 70/240 (29%), Positives = 115/240 (47%), Gaps = 22/240 (9%)
Query: 227 KQFNREVALLSRLHNPNVIKFVAACKKPPVYCV--ITEYLSEGSLRAYLHKLEHKTLPLP 284
+ F RE+ +L L + N++K+ C + I EYL GSLR YL K + + +
Sbjct: 59 RDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHI- 117
Query: 285 KLIAIALDIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIA--CEEVYCDALSD 342
KL+ I +GMEY+ ++ IHRDL N+L++ E +KI DFG+ +
Sbjct: 118 KLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVK 177
Query: 343 DPGT--YRWMAPEMIKHKSYGRKVDVYSFGLILWEMV-----AGTIPYEEM----NPIQA 391
+PG W APE + + DV+SFG++L+E+ + + P E M N Q
Sbjct: 178 EPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQG 237
Query: 392 AFAV------VNKNLRPAIPGDCPPAMAALIEQCWSLQPDKRPEFWHIVKVLEQFETSLA 445
V + N R P CP + ++ +CW+ ++RP F + ++Q ++A
Sbjct: 238 QMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDNMA 297
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 70/240 (29%), Positives = 115/240 (47%), Gaps = 22/240 (9%)
Query: 227 KQFNREVALLSRLHNPNVIKFVAACKKPPVYCV--ITEYLSEGSLRAYLHKLEHKTLPLP 284
+ F RE+ +L L + N++K+ C + I EYL GSLR YL K + + +
Sbjct: 61 RDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHI- 119
Query: 285 KLIAIALDIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIA--CEEVYCDALSD 342
KL+ I +GMEY+ ++ IHRDL N+L++ E +KI DFG+ +
Sbjct: 120 KLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVK 179
Query: 343 DPGT--YRWMAPEMIKHKSYGRKVDVYSFGLILWEMV-----AGTIPYEEM----NPIQA 391
+PG W APE + + DV+SFG++L+E+ + + P E M N Q
Sbjct: 180 EPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQG 239
Query: 392 AFAV------VNKNLRPAIPGDCPPAMAALIEQCWSLQPDKRPEFWHIVKVLEQFETSLA 445
V + N R P CP + ++ +CW+ ++RP F + ++Q ++A
Sbjct: 240 QMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDNMA 299
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 70/240 (29%), Positives = 115/240 (47%), Gaps = 22/240 (9%)
Query: 227 KQFNREVALLSRLHNPNVIKFVAACKKPPVYCV--ITEYLSEGSLRAYLHKLEHKTLPLP 284
+ F RE+ +L L + N++K+ C + I EYL GSLR YL K + + +
Sbjct: 56 RDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHI- 114
Query: 285 KLIAIALDIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIA--CEEVYCDALSD 342
KL+ I +GMEY+ ++ IHRDL N+L++ E +KI DFG+ +
Sbjct: 115 KLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVK 174
Query: 343 DPGT--YRWMAPEMIKHKSYGRKVDVYSFGLILWEMV-----AGTIPYEEM----NPIQA 391
+PG W APE + + DV+SFG++L+E+ + + P E M N Q
Sbjct: 175 EPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQG 234
Query: 392 AFAV------VNKNLRPAIPGDCPPAMAALIEQCWSLQPDKRPEFWHIVKVLEQFETSLA 445
V + N R P CP + ++ +CW+ ++RP F + ++Q ++A
Sbjct: 235 QMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDNMA 294
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 69/265 (26%), Positives = 123/265 (46%), Gaps = 15/265 (5%)
Query: 187 FAHGAHSRLYHGIYKDEPVAVKIIRIPDDDENETLAARLEKQFNREVALLSRLHNPNVIK 246
HGA +Y G P +++ E + + E F E ++S+ ++ N+++
Sbjct: 38 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 97
Query: 247 FVAACKKPPVYCVITEYLSEGSLRAYLHKLEHK-----TLPLPKLIAIALDIARGMEYIH 301
+ + ++ E ++ G L+++L + + +L + L+ +A DIA G +Y+
Sbjct: 98 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 157
Query: 302 SQGVIHRDLKPENVLIDQEFH---LKIADFGIACEEVYCDALSDDPGT----YRWMAPEM 354
IHRD+ N L+ KI DFG+A ++Y + G +WM PE
Sbjct: 158 ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMA-RDIYRASYYRKGGCAMLPVKWMPPEA 216
Query: 355 IKHKSYGRKVDVYSFGLILWEMVA-GTIPYEEMNPIQAAFAVVNKNLRPAIPGDCPPAMA 413
+ K D +SFG++LWE+ + G +PY + Q V R P +CP +
Sbjct: 217 FMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSN-QEVLEFVTSGGRMDPPKNCPGPVY 275
Query: 414 ALIEQCWSLQPDKRPEFWHIVKVLE 438
++ QCW QP+ RP F I++ +E
Sbjct: 276 RIMTQCWQHQPEDRPNFAIILERIE 300
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 70/240 (29%), Positives = 115/240 (47%), Gaps = 22/240 (9%)
Query: 227 KQFNREVALLSRLHNPNVIKFVAACKKPPVYCV--ITEYLSEGSLRAYLHKLEHKTLPLP 284
+ F RE+ +L L + N++K+ C + I EYL GSLR YL K + + +
Sbjct: 62 RDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHI- 120
Query: 285 KLIAIALDIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIA--CEEVYCDALSD 342
KL+ I +GMEY+ ++ IHRDL N+L++ E +KI DFG+ +
Sbjct: 121 KLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVK 180
Query: 343 DPGT--YRWMAPEMIKHKSYGRKVDVYSFGLILWEMV-----AGTIPYEEM----NPIQA 391
+PG W APE + + DV+SFG++L+E+ + + P E M N Q
Sbjct: 181 EPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQG 240
Query: 392 AFAV------VNKNLRPAIPGDCPPAMAALIEQCWSLQPDKRPEFWHIVKVLEQFETSLA 445
V + N R P CP + ++ +CW+ ++RP F + ++Q ++A
Sbjct: 241 QMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDNMA 300
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 70/240 (29%), Positives = 115/240 (47%), Gaps = 22/240 (9%)
Query: 227 KQFNREVALLSRLHNPNVIKFVAACKKPPVYCV--ITEYLSEGSLRAYLHKLEHKTLPLP 284
+ F RE+ +L L + N++K+ C + I EYL GSLR YL K + + +
Sbjct: 74 RDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHI- 132
Query: 285 KLIAIALDIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIA--CEEVYCDALSD 342
KL+ I +GMEY+ ++ IHRDL N+L++ E +KI DFG+ +
Sbjct: 133 KLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVK 192
Query: 343 DPGT--YRWMAPEMIKHKSYGRKVDVYSFGLILWEMV-----AGTIPYEEM----NPIQA 391
+PG W APE + + DV+SFG++L+E+ + + P E M N Q
Sbjct: 193 EPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQG 252
Query: 392 AFAV------VNKNLRPAIPGDCPPAMAALIEQCWSLQPDKRPEFWHIVKVLEQFETSLA 445
V + N R P CP + ++ +CW+ ++RP F + ++Q ++A
Sbjct: 253 QMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDNMA 312
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 70/240 (29%), Positives = 115/240 (47%), Gaps = 22/240 (9%)
Query: 227 KQFNREVALLSRLHNPNVIKFVAACKKPPV--YCVITEYLSEGSLRAYLHKLEHKTLPLP 284
+ F RE+ +L L + N++K+ C +I EYL GSLR YL K + + +
Sbjct: 55 RDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHI- 113
Query: 285 KLIAIALDIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIA--CEEVYCDALSD 342
KL+ I +GMEY+ ++ IHRDL N+L++ E +KI DFG+ +
Sbjct: 114 KLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVK 173
Query: 343 DPGT--YRWMAPEMIKHKSYGRKVDVYSFGLILWEMV-----AGTIPYEEM----NPIQA 391
+PG W APE + + DV+SFG++L+E+ + + P E M N Q
Sbjct: 174 EPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQG 233
Query: 392 AFAV------VNKNLRPAIPGDCPPAMAALIEQCWSLQPDKRPEFWHIVKVLEQFETSLA 445
V + N R P CP + ++ +CW+ ++RP F + ++Q ++A
Sbjct: 234 QMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDNMA 293
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 70/240 (29%), Positives = 115/240 (47%), Gaps = 22/240 (9%)
Query: 227 KQFNREVALLSRLHNPNVIKFVAACKKPPVYCV--ITEYLSEGSLRAYLHKLEHKTLPLP 284
+ F RE+ +L L + N++K+ C + I EYL GSLR YL K + + +
Sbjct: 56 RDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHI- 114
Query: 285 KLIAIALDIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIA--CEEVYCDALSD 342
KL+ I +GMEY+ ++ IHRDL N+L++ E +KI DFG+ +
Sbjct: 115 KLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVK 174
Query: 343 DPGT--YRWMAPEMIKHKSYGRKVDVYSFGLILWEMV-----AGTIPYEEM----NPIQA 391
+PG W APE + + DV+SFG++L+E+ + + P E M N Q
Sbjct: 175 EPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQG 234
Query: 392 AFAV------VNKNLRPAIPGDCPPAMAALIEQCWSLQPDKRPEFWHIVKVLEQFETSLA 445
V + N R P CP + ++ +CW+ ++RP F + ++Q ++A
Sbjct: 235 QMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDNMA 294
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 73/291 (25%), Positives = 133/291 (45%), Gaps = 16/291 (5%)
Query: 187 FAHGAHSRLYHGIYKDEPVAVKIIRIPDDDENETLAARLEKQFNREVALLSRLHNPNVIK 246
HGA +Y G P +++ E + + E F E ++S+ ++ N+++
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVYSEQDELDFLMEALIISKFNHQNIVR 112
Query: 247 FVAACKKPPVYCVITEYLSEGSLRAYLHKLEHK-----TLPLPKLIAIALDIARGMEYIH 301
+ + ++ E ++ G L+++L + + +L + L+ +A DIA G +Y+
Sbjct: 113 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 172
Query: 302 SQGVIHRDLKPENVLIDQEFH---LKIADFGIACEEVYCDALSDDPGT----YRWMAPEM 354
IHRD+ N L+ KI DFG+A ++Y + G +WM PE
Sbjct: 173 ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMA-RDIYRASYYRKGGCAMLPVKWMPPEA 231
Query: 355 IKHKSYGRKVDVYSFGLILWEMVA-GTIPYEEMNPIQAAFAVVNKNLRPAIPGDCPPAMA 413
+ K D +SFG++LWE+ + G +PY + Q V R P +CP +
Sbjct: 232 FMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSN-QEVLEFVTSGGRMDPPKNCPGPVY 290
Query: 414 ALIEQCWSLQPDKRPEFWHIVKVLEQF-ETSLACNGTLNLVQNPICQDHKK 463
++ QCW QP+ RP F I++ +E + N L + P+ ++ +K
Sbjct: 291 RIMTQCWQHQPEDRPNFAIILERIEYCTQDPDVINTALPIEYGPLVEEEEK 341
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 74/256 (28%), Positives = 120/256 (46%), Gaps = 30/256 (11%)
Query: 203 EPVAVKIIRIPDDDENETLAARLEKQFNREVALLSRLHNPNVIKFVAACKKPPVYCV--I 260
E VAVK ++ E +L + RE+ +L L++ +++K+ C+ V +
Sbjct: 39 EMVAVKALK-------EGCGPQLRSGWQREIEILRTLYHEHIVKYKGCCEDQGEKSVQLV 91
Query: 261 TEYLSEGSLRAYLHKLEHKTLPLPKLIAIALDIARGMEYIHSQGVIHRDLKPENVLIDQE 320
EY+ GSLR YL + + L +L+ A I GM Y+H+Q IHR L NVL+D +
Sbjct: 92 MEYVPLGSLRDYLPR---HCVGLAQLLLFAQQICEGMAYLHAQHYIHRALAARNVLLDND 148
Query: 321 FHLKIADFGIACE----EVYCDALSDDPGTYRWMAPEMIKHKSYGRKVDVYSFGLILWEM 376
+KI DFG+A Y D W APE +K + DV+SFG+ L+E+
Sbjct: 149 RLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKECKFYYASDVWSFGVTLYEL 208
Query: 377 V----AGTIPYEEMNPI----QAAFAV------VNKNLRPAIPGDCPPAMAALIEQCWSL 422
+ + P+ + + Q V + + R P CP + L++ CW
Sbjct: 209 LTYCDSNQSPHTKFTELIGHTQGQMTVLRLTELLERGERLPRPDRCPCEIYHLMKNCWET 268
Query: 423 QPDKRPEFWHIVKVLE 438
+ RP F ++V +L+
Sbjct: 269 EASFRPTFQNLVPILQ 284
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 70/240 (29%), Positives = 114/240 (47%), Gaps = 22/240 (9%)
Query: 227 KQFNREVALLSRLHNPNVIKFVAACKKPPV--YCVITEYLSEGSLRAYLHKLEHKTLPLP 284
+ F RE+ +L L + N++K+ C +I EYL GSLR YL K + + +
Sbjct: 87 RDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHI- 145
Query: 285 KLIAIALDIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIA--CEEVYCDALSD 342
KL+ I +GMEY+ ++ IHRDL N+L++ E +KI DFG+ +
Sbjct: 146 KLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVK 205
Query: 343 DPGT--YRWMAPEMIKHKSYGRKVDVYSFGLILWEMV-----AGTIPYEEM----NPIQA 391
+PG W APE + + DV+SFG++L+E+ + + P E M N Q
Sbjct: 206 EPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQG 265
Query: 392 AFAV------VNKNLRPAIPGDCPPAMAALIEQCWSLQPDKRPEFWHIVKVLEQFETSLA 445
V + N R P CP + ++ +CW+ ++RP F + ++Q +A
Sbjct: 266 QMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDQMA 325
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 74/256 (28%), Positives = 120/256 (46%), Gaps = 30/256 (11%)
Query: 203 EPVAVKIIRIPDDDENETLAARLEKQFNREVALLSRLHNPNVIKFVAACKKPPVYCV--I 260
E VAVK ++ E +L + RE+ +L L++ +++K+ C+ V +
Sbjct: 38 EMVAVKALK-------EGCGPQLRSGWQREIEILRTLYHEHIVKYKGCCEDQGEKSVQLV 90
Query: 261 TEYLSEGSLRAYLHKLEHKTLPLPKLIAIALDIARGMEYIHSQGVIHRDLKPENVLIDQE 320
EY+ GSLR YL + + L +L+ A I GM Y+H+Q IHR L NVL+D +
Sbjct: 91 MEYVPLGSLRDYLPR---HCVGLAQLLLFAQQICEGMAYLHAQHYIHRALAARNVLLDND 147
Query: 321 FHLKIADFGIACE----EVYCDALSDDPGTYRWMAPEMIKHKSYGRKVDVYSFGLILWEM 376
+KI DFG+A Y D W APE +K + DV+SFG+ L+E+
Sbjct: 148 RLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKECKFYYASDVWSFGVTLYEL 207
Query: 377 V----AGTIPYEEMNPI----QAAFAV------VNKNLRPAIPGDCPPAMAALIEQCWSL 422
+ + P+ + + Q V + + R P CP + L++ CW
Sbjct: 208 LTYCDSNQSPHTKFTELIGHTQGQMTVLRLTELLERGERLPRPDRCPCEIYHLMKNCWET 267
Query: 423 QPDKRPEFWHIVKVLE 438
+ RP F ++V +L+
Sbjct: 268 EASFRPTFQNLVPILQ 283
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 70/240 (29%), Positives = 115/240 (47%), Gaps = 22/240 (9%)
Query: 227 KQFNREVALLSRLHNPNVIKFVAACKKPPVYCV--ITEYLSEGSLRAYLHKLEHKTLPLP 284
+ F RE+ +L L + N++K+ C + I EYL GSLR YL K + + +
Sbjct: 60 RDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHI- 118
Query: 285 KLIAIALDIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIA--CEEVYCDALSD 342
KL+ I +GMEY+ ++ IHRDL N+L++ E +KI DFG+ +
Sbjct: 119 KLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVK 178
Query: 343 DPGT--YRWMAPEMIKHKSYGRKVDVYSFGLILWEMV-----AGTIPYEEM----NPIQA 391
+PG W APE + + DV+SFG++L+E+ + + P E M N Q
Sbjct: 179 EPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQG 238
Query: 392 AFAV------VNKNLRPAIPGDCPPAMAALIEQCWSLQPDKRPEFWHIVKVLEQFETSLA 445
V + N R P CP + ++ +CW+ ++RP F + ++Q ++A
Sbjct: 239 QMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDNMA 298
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 72/246 (29%), Positives = 114/246 (46%), Gaps = 34/246 (13%)
Query: 227 KQFNREVALLSRLHNPNVIKFVAACKKPPV--YCVITEYLSEGSLRAYLHKLEHKTLPLP 284
+ F RE+ +L L + N++K+ C +I EYL GSLR YL K + + +
Sbjct: 54 RDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHI- 112
Query: 285 KLIAIALDIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIACEEVYCDALSDD- 343
KL+ I +GMEY+ ++ IHRDL N+L++ E +KI DFG+ L D
Sbjct: 113 KLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLT------KVLPQDK 166
Query: 344 -------PGT--YRWMAPEMIKHKSYGRKVDVYSFGLILWEMV-----AGTIPYEEM--- 386
PG W APE + + DV+SFG++L+E+ + + P E M
Sbjct: 167 EXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMI 226
Query: 387 -NPIQAAFAV------VNKNLRPAIPGDCPPAMAALIEQCWSLQPDKRPEFWHIVKVLEQ 439
N Q V + N R P CP + ++ +CW+ ++RP F + ++Q
Sbjct: 227 GNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQ 286
Query: 440 FETSLA 445
+A
Sbjct: 287 IRDQMA 292
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 70/256 (27%), Positives = 120/256 (46%), Gaps = 28/256 (10%)
Query: 203 EPVAVKIIRIPDDDENETLAARLEKQFNREVALLSRLHNPNVIKFVAACKKPPVYCV--I 260
E VAVK ++ P+ N +E+ +L L++ N++K+ C + + I
Sbjct: 39 EQVAVKSLK-PESGGNHI------ADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLI 91
Query: 261 TEYLSEGSLRAYLHKLEHKTLPLPKLIAIALDIARGMEYIHSQGVIHRDLKPENVLIDQE 320
E+L GSL+ YL K ++K + L + + A+ I +GM+Y+ S+ +HRDL NVL++ E
Sbjct: 92 MEFLPSGSLKEYLPKNKNK-INLKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLVESE 150
Query: 321 FHLKIADFG----IACEEVYCDALSDDPGTYRWMAPEMIKHKSYGRKVDVYSFGLILWEM 376
+KI DFG I ++ D W APE + + DV+SFG+ L E+
Sbjct: 151 HQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHEL 210
Query: 377 VA--------GTIPYEEMNPIQAAFAV------VNKNLRPAIPGDCPPAMAALIEQCWSL 422
+ + + + P V + + R P +CP + L+ +CW
Sbjct: 211 LTYCDSDSSPMALFLKMIGPTHGQMTVTRLVNTLKEGKRLPCPPNCPDEVYQLMRKCWEF 270
Query: 423 QPDKRPEFWHIVKVLE 438
QP R F ++++ E
Sbjct: 271 QPSNRTSFQNLIEGFE 286
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 68/228 (29%), Positives = 111/228 (48%), Gaps = 27/228 (11%)
Query: 226 EKQFNREVALLSRLHNPNVIKFVAACKKPPVYCV--ITEYLSEGSLRAYLHKLEHKTLPL 283
++ F RE+ +L LH+ ++K+ P + + EYL G LR +L + L
Sbjct: 55 QRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQR-HRARLDA 113
Query: 284 PKLIAIALDIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIA----CEEVYCDA 339
+L+ + I +GMEY+ S+ +HRDL N+L++ E H+KIADFG+A ++ Y
Sbjct: 114 SRLLLYSSQICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVV 173
Query: 340 LSDDPGTYRWMAPEMIKHKSYGRKVDVYSFGLILWEMVAGTIPYEEMNPIQAAFAVVNKN 399
W APE + + R+ DV+SFG++L+E+ T + +P A F + +
Sbjct: 174 REPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELF--TYCDKSCSP-SAEFLRMMGS 230
Query: 400 LR--PAI---------------PGDCPPAMAALIEQCWSLQPDKRPEF 430
R PA+ P CP + L++ CW+ P RP F
Sbjct: 231 ERDVPALSRLLELLEEGQRLPAPPACPAEVHELMKLCWAPSPQDRPSF 278
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 70/256 (27%), Positives = 120/256 (46%), Gaps = 28/256 (10%)
Query: 203 EPVAVKIIRIPDDDENETLAARLEKQFNREVALLSRLHNPNVIKFVAACKKPPVYCV--I 260
E VAVK ++ P+ N +E+ +L L++ N++K+ C + + I
Sbjct: 51 EQVAVKSLK-PESGGNHI------ADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLI 103
Query: 261 TEYLSEGSLRAYLHKLEHKTLPLPKLIAIALDIARGMEYIHSQGVIHRDLKPENVLIDQE 320
E+L GSL+ YL K ++K + L + + A+ I +GM+Y+ S+ +HRDL NVL++ E
Sbjct: 104 MEFLPSGSLKEYLPKNKNK-INLKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLVESE 162
Query: 321 FHLKIADFG----IACEEVYCDALSDDPGTYRWMAPEMIKHKSYGRKVDVYSFGLILWEM 376
+KI DFG I ++ D W APE + + DV+SFG+ L E+
Sbjct: 163 HQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHEL 222
Query: 377 VA--------GTIPYEEMNPIQAAFAV------VNKNLRPAIPGDCPPAMAALIEQCWSL 422
+ + + + P V + + R P +CP + L+ +CW
Sbjct: 223 LTYCDSDSSPMALFLKMIGPTHGQMTVTRLVNTLKEGKRLPCPPNCPDEVYQLMRKCWEF 282
Query: 423 QPDKRPEFWHIVKVLE 438
QP R F ++++ E
Sbjct: 283 QPSNRTSFQNLIEGFE 298
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 102 bits (255), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 108/225 (48%), Gaps = 21/225 (9%)
Query: 226 EKQFNREVALLSRLHNPNVIKFVAACKKPPVYCV--ITEYLSEGSLRAYLHKLEHKTLPL 283
++ F RE+ +L LH+ ++K+ P + + EYL G LR +L + L
Sbjct: 68 QRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQR-HRARLDA 126
Query: 284 PKLIAIALDIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIA----CEEVYCDA 339
+L+ + I +GMEY+ S+ +HRDL N+L++ E H+KIADFG+A ++ Y
Sbjct: 127 SRLLLYSSQICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVV 186
Query: 340 LSDDPGTYRWMAPEMIKHKSYGRKVDVYSFGLILWEM-------VAGTIPYEEMNPIQAA 392
W APE + + R+ DV+SFG++L+E+ + + + M +
Sbjct: 187 REPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCERD 246
Query: 393 FAVVNK-------NLRPAIPGDCPPAMAALIEQCWSLQPDKRPEF 430
+++ R P CP + L++ CW+ P RP F
Sbjct: 247 VPALSRLLELLEEGQRLPAPPACPAEVHELMKLCWAPSPQDRPSF 291
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 102 bits (254), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 69/240 (28%), Positives = 115/240 (47%), Gaps = 22/240 (9%)
Query: 227 KQFNREVALLSRLHNPNVIKFVAACKKPPVYCV--ITEYLSEGSLRAYLHKLEHKTLPLP 284
+ F RE+ +L L + N++K+ C + I E+L GSLR YL K + + +
Sbjct: 59 RDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEFLPYGSLREYLQKHKERIDHI- 117
Query: 285 KLIAIALDIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIA--CEEVYCDALSD 342
KL+ I +GMEY+ ++ IHRDL N+L++ E +KI DFG+ +
Sbjct: 118 KLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVK 177
Query: 343 DPGT--YRWMAPEMIKHKSYGRKVDVYSFGLILWEMV-----AGTIPYEEM----NPIQA 391
+PG W APE + + DV+SFG++L+E+ + + P E M N Q
Sbjct: 178 EPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQG 237
Query: 392 AFAV------VNKNLRPAIPGDCPPAMAALIEQCWSLQPDKRPEFWHIVKVLEQFETSLA 445
V + N R P CP + ++ +CW+ ++RP F + ++Q ++A
Sbjct: 238 QMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDNMA 297
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 102 bits (254), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 65/250 (26%), Positives = 128/250 (51%), Gaps = 23/250 (9%)
Query: 186 RFAHGAHSRLYHG--IYKDEPVAVKIIRIPDDDENETLAARLEKQFNREVALLSRLHNPN 243
+ GA +Y + + VA++ + + + E + E+ ++ NPN
Sbjct: 27 KIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELII--------NEILVMRENKNPN 78
Query: 244 VIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIALDIARGMEYIHSQ 303
++ ++ + V+ EYL+ GSL + + + ++ A+ + + +E++HS
Sbjct: 79 IVNYLDSYLVGDELWVVMEYLAGGSLTDVVTE---TCMDEGQIAAVCRECLQALEFLHSN 135
Query: 304 GVIHRDLKPENVLIDQEFHLKIADFGIACEEVYCDA--LSDDPGTYRWMAPEMIKHKSYG 361
VIHRD+K +N+L+ + +K+ DFG C ++ + S+ GT WMAPE++ K+YG
Sbjct: 136 QVIHRDIKSDNILLGMDGSVKLTDFGF-CAQITPEQSKRSEMVGTPYWMAPEVVTRKAYG 194
Query: 362 RKVDVYSFGLILWEMVAGTIPYEEMNPIQAAFAVVNKNLRPAIPGDCPPAMAAL----IE 417
KVD++S G++ EM+ G PY NP++A + ++ N P + P ++A+ +
Sbjct: 195 PKVDIWSLGIMAIEMIEGEPPYLNENPLRALY-LIATNGTPELQN--PEKLSAIFRDFLN 251
Query: 418 QCWSLQPDKR 427
+C + +KR
Sbjct: 252 RCLDMDVEKR 261
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 102 bits (254), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 67/226 (29%), Positives = 106/226 (46%), Gaps = 23/226 (10%)
Query: 226 EKQFNREVALLSRLHNPNVIKFVAACKKPPVYCV--ITEYLSEGSLRAYLHKLEHKTLPL 283
++ F RE+ +L LH+ ++K+ P + + EYL G LR +L + L
Sbjct: 56 QRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQR-HRARLDA 114
Query: 284 PKLIAIALDIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIA----CEEVYCDA 339
+L+ + I +GMEY+ S+ +HRDL N+L++ E H+KIADFG+A ++ Y
Sbjct: 115 SRLLLYSSQICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVV 174
Query: 340 LSDDPGTYRWMAPEMIKHKSYGRKVDVYSFGLILWEMVA----GTIPYEEMNPIQAAFAV 395
W APE + + R+ DV+SFG++L+E+ P E +
Sbjct: 175 REPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCERD 234
Query: 396 VNKNLR-----------PAIPGDCPPAMAALIEQCWSLQPDKRPEF 430
V R PA P CP + L++ CW+ P RP F
Sbjct: 235 VPALCRLLELLEEGQRLPAPPA-CPAEVHELMKLCWAPSPQDRPSF 279
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 102 bits (253), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 69/239 (28%), Positives = 114/239 (47%), Gaps = 22/239 (9%)
Query: 227 KQFNREVALLSRLHNPNVIKFVAACKKPPVYCV--ITEYLSEGSLRAYLHKLEHKTLPLP 284
+ F RE+ +L L + N++K+ C + I EYL GSLR YL K + + +
Sbjct: 74 RDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHI- 132
Query: 285 KLIAIALDIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIA--CEEVYCDALSD 342
KL+ I +GMEY+ ++ IHRDL N+L++ E +KI DFG+ +
Sbjct: 133 KLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVK 192
Query: 343 DPGT--YRWMAPEMIKHKSYGRKVDVYSFGLILWEMV-----AGTIPYEEM----NPIQA 391
+PG W APE + + DV+SFG++L+E+ + + P E M N Q
Sbjct: 193 EPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQG 252
Query: 392 AFAV------VNKNLRPAIPGDCPPAMAALIEQCWSLQPDKRPEFWHIVKVLEQFETSL 444
V + N R P CP + ++ +CW+ ++RP F + ++Q ++
Sbjct: 253 QMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDNM 311
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 101 bits (252), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 65/250 (26%), Positives = 127/250 (50%), Gaps = 23/250 (9%)
Query: 186 RFAHGAHSRLYHG--IYKDEPVAVKIIRIPDDDENETLAARLEKQFNREVALLSRLHNPN 243
+ GA +Y + + VA++ + + + E + E+ ++ NPN
Sbjct: 27 KIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELII--------NEILVMRENKNPN 78
Query: 244 VIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIALDIARGMEYIHSQ 303
++ ++ + V+ EYL+ GSL + + + ++ A+ + + +E++HS
Sbjct: 79 IVNYLDSYLVGDELWVVMEYLAGGSLTDVVTE---TCMDEGQIAAVCRECLQALEFLHSN 135
Query: 304 GVIHRDLKPENVLIDQEFHLKIADFGIACEEVYCDA--LSDDPGTYRWMAPEMIKHKSYG 361
VIHRD+K +N+L+ + +K+ DFG C ++ + S GT WMAPE++ K+YG
Sbjct: 136 QVIHRDIKSDNILLGMDGSVKLTDFGF-CAQITPEQSKRSTMVGTPYWMAPEVVTRKAYG 194
Query: 362 RKVDVYSFGLILWEMVAGTIPYEEMNPIQAAFAVVNKNLRPAIPGDCPPAMAAL----IE 417
KVD++S G++ EM+ G PY NP++A + ++ N P + P ++A+ +
Sbjct: 195 PKVDIWSLGIMAIEMIEGEPPYLNENPLRALY-LIATNGTPELQN--PEKLSAIFRDFLN 251
Query: 418 QCWSLQPDKR 427
+C + +KR
Sbjct: 252 RCLDMDVEKR 261
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 101 bits (251), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 65/250 (26%), Positives = 127/250 (50%), Gaps = 23/250 (9%)
Query: 186 RFAHGAHSRLYHG--IYKDEPVAVKIIRIPDDDENETLAARLEKQFNREVALLSRLHNPN 243
+ GA +Y + + VA++ + + + E + E+ ++ NPN
Sbjct: 27 KIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELII--------NEILVMRENKNPN 78
Query: 244 VIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIALDIARGMEYIHSQ 303
++ ++ + V+ EYL+ GSL + + + ++ A+ + + +E++HS
Sbjct: 79 IVNYLDSYLVGDELWVVMEYLAGGSLTDVVTE---TCMDEGQIAAVCRECLQALEFLHSN 135
Query: 304 GVIHRDLKPENVLIDQEFHLKIADFGIACEEVYCDA--LSDDPGTYRWMAPEMIKHKSYG 361
VIHRD+K +N+L+ + +K+ DFG C ++ + S GT WMAPE++ K+YG
Sbjct: 136 QVIHRDIKSDNILLGMDGSVKLTDFGF-CAQITPEQSKRSXMVGTPYWMAPEVVTRKAYG 194
Query: 362 RKVDVYSFGLILWEMVAGTIPYEEMNPIQAAFAVVNKNLRPAIPGDCPPAMAAL----IE 417
KVD++S G++ EM+ G PY NP++A + ++ N P + P ++A+ +
Sbjct: 195 PKVDIWSLGIMAIEMIEGEPPYLNENPLRALY-LIATNGTPELQN--PEKLSAIFRDFLN 251
Query: 418 QCWSLQPDKR 427
+C + +KR
Sbjct: 252 RCLEMDVEKR 261
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 65/250 (26%), Positives = 127/250 (50%), Gaps = 23/250 (9%)
Query: 186 RFAHGAHSRLYHG--IYKDEPVAVKIIRIPDDDENETLAARLEKQFNREVALLSRLHNPN 243
+ GA +Y + + VA++ + + + E + E+ ++ NPN
Sbjct: 28 KIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELII--------NEILVMRENKNPN 79
Query: 244 VIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIALDIARGMEYIHSQ 303
++ ++ + V+ EYL+ GSL + + + ++ A+ + + +E++HS
Sbjct: 80 IVNYLDSYLVGDELWVVMEYLAGGSLTDVVTE---TCMDEGQIAAVCRECLQALEFLHSN 136
Query: 304 GVIHRDLKPENVLIDQEFHLKIADFGIACEEVYCDA--LSDDPGTYRWMAPEMIKHKSYG 361
VIHRD+K +N+L+ + +K+ DFG C ++ + S GT WMAPE++ K+YG
Sbjct: 137 QVIHRDIKSDNILLGMDGSVKLTDFGF-CAQITPEQSKRSXMVGTPYWMAPEVVTRKAYG 195
Query: 362 RKVDVYSFGLILWEMVAGTIPYEEMNPIQAAFAVVNKNLRPAIPGDCPPAMAAL----IE 417
KVD++S G++ EM+ G PY NP++A + ++ N P + P ++A+ +
Sbjct: 196 PKVDIWSLGIMAIEMIEGEPPYLNENPLRALY-LIATNGTPELQN--PEKLSAIFRDFLN 252
Query: 418 QCWSLQPDKR 427
+C + +KR
Sbjct: 253 RCLEMDVEKR 262
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 71/253 (28%), Positives = 116/253 (45%), Gaps = 28/253 (11%)
Query: 205 VAVKIIRIPDDDENETLAARLEKQFNREVALLSRLHNPNVIKFVAACKKPPVYCVITEYL 264
VAVK ++ D+ AR K F+RE LL+ L + +++KF C + ++ EY+
Sbjct: 46 VAVKTLKDASDN------AR--KDFHREAELLTNLQHEHIVKFYGVCVEGDPLIMVFEYM 97
Query: 265 SEGSLRAYLHKLEH-------------KTLPLPKLIAIALDIARGMEYIHSQGVIHRDLK 311
G L +L H L +++ IA IA GM Y+ SQ +HRDL
Sbjct: 98 KHGDLNKFLRA--HGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQHFVHRDLA 155
Query: 312 PENVLIDQEFHLKIADFGIACEEVYCDALSDDPGTY---RWMAPEMIKHKSYGRKVDVYS 368
N L+ + +KI DFG++ + D T RWM PE I ++ + + DV+S
Sbjct: 156 TRNCLVGENLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWS 215
Query: 369 FGLILWEMVA-GTIPYEEMNPIQAAFAVVNKNLRPAIPGDCPPAMAALIEQCWSLQPDKR 427
G++LWE+ G P+ +++ + + + P CP + L+ CW +P R
Sbjct: 216 LGVVLWEIFTYGKQPWYQLSNNEVIECITQGRVLQR-PRTCPQEVYELMLGCWQREPHMR 274
Query: 428 PEFWHIVKVLEQF 440
I +L+
Sbjct: 275 KNIKGIHTLLQNL 287
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 69/240 (28%), Positives = 113/240 (47%), Gaps = 22/240 (9%)
Query: 227 KQFNREVALLSRLHNPNVIKFVAACKKPPVYCV--ITEYLSEGSLRAYLHKLEHKTLPLP 284
+ F RE+ +L L + N++K+ C + I EYL GSLR YL + +
Sbjct: 59 RDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQAHAERIDHI- 117
Query: 285 KLIAIALDIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIA--CEEVYCDALSD 342
KL+ I +GMEY+ ++ IHRDL N+L++ E +KI DFG+ +
Sbjct: 118 KLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVK 177
Query: 343 DPGT--YRWMAPEMIKHKSYGRKVDVYSFGLILWEMV-----AGTIPYEEM----NPIQA 391
+PG W APE + + DV+SFG++L+E+ + + P E M N Q
Sbjct: 178 EPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQG 237
Query: 392 AFAV------VNKNLRPAIPGDCPPAMAALIEQCWSLQPDKRPEFWHIVKVLEQFETSLA 445
V + N R P CP + ++ +CW+ ++RP F + ++Q ++A
Sbjct: 238 QMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDNMA 297
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 73/254 (28%), Positives = 116/254 (45%), Gaps = 26/254 (10%)
Query: 187 FAHGAHSRLYHGIYKDEPVAVKIIRIPDDDENETLAARLEKQFNREVALLSRLHNPNVIK 246
G + +Y G V + I IP+ D +R + + E+AL L + N+++
Sbjct: 30 LGKGTYGIVYAGRDLSNQVRIAIKEIPERD------SRYSQPLHEEIALHKHLKHKNIVQ 83
Query: 247 FVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAI-ALDIARGMEYIHSQGV 305
++ + + + E + GSL A L + I I G++Y+H +
Sbjct: 84 YLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQI 143
Query: 306 IHRDLKPENVLIDQ-EFHLKIADFGIA--------CEEVYCDALSDDPGTYRWMAPEMIK 356
+HRD+K +NVLI+ LKI+DFG + C E + GT ++MAPE+I
Sbjct: 144 VHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTETFT-------GTLQYMAPEIID 196
Query: 357 H--KSYGRKVDVYSFGLILWEMVAGTIPYEEMNPIQAA-FAVVNKNLRPAIPGDCPPAMA 413
+ YG+ D++S G + EM G P+ E+ QAA F V + P IP
Sbjct: 197 KGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKVGMFKVHPEIPESMSAEAK 256
Query: 414 ALIEQCWSLQPDKR 427
A I +C+ PDKR
Sbjct: 257 AFILKCFEPDPDKR 270
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 68/231 (29%), Positives = 111/231 (48%), Gaps = 25/231 (10%)
Query: 229 FNREVALLSRLHNPNVIKFVAACKKPPVYCV--ITEYLSEGSLRAYLHKLEHKTLPLPKL 286
+ +E+ +L L++ ++IK+ C+ + + EY+ GSLR YL + ++ L +L
Sbjct: 80 WKQEIDILRTLYHEHIIKYKGCCEDAGAASLQLVMEYVPLGSLRDYLPR---HSIGLAQL 136
Query: 287 IAIALDIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIA-----CEEVYCDALS 341
+ A I GM Y+H+Q IHRDL NVL+D + +KI DFG+A E Y
Sbjct: 137 LLFAQQICEGMAYLHAQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEXY-RVRE 195
Query: 342 DDPGTYRWMAPEMIKHKSYGRKVDVYSFGLILWEMVAG--------TIPYEEMNPIQAAF 393
D W APE +K + DV+SFG+ L+E++ T E + Q
Sbjct: 196 DGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQM 255
Query: 394 AV------VNKNLRPAIPGDCPPAMAALIEQCWSLQPDKRPEFWHIVKVLE 438
V + + R P CP + L++ CW + RP F +++ +L+
Sbjct: 256 TVLRLTELLERGERLPRPDKCPAEVYHLMKNCWETEASFRPTFENLIPILK 306
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 73/254 (28%), Positives = 116/254 (45%), Gaps = 26/254 (10%)
Query: 187 FAHGAHSRLYHGIYKDEPVAVKIIRIPDDDENETLAARLEKQFNREVALLSRLHNPNVIK 246
G + +Y G V + I IP+ D +R + + E+AL L + N+++
Sbjct: 16 LGKGTYGIVYAGRDLSNQVRIAIKEIPERD------SRYSQPLHEEIALHKHLKHKNIVQ 69
Query: 247 FVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAI-ALDIARGMEYIHSQGV 305
++ + + + E + GSL A L + I I G++Y+H +
Sbjct: 70 YLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQI 129
Query: 306 IHRDLKPENVLIDQ-EFHLKIADFGIA--------CEEVYCDALSDDPGTYRWMAPEMIK 356
+HRD+K +NVLI+ LKI+DFG + C E + GT ++MAPE+I
Sbjct: 130 VHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTETFT-------GTLQYMAPEIID 182
Query: 357 H--KSYGRKVDVYSFGLILWEMVAGTIPYEEMNPIQAA-FAVVNKNLRPAIPGDCPPAMA 413
+ YG+ D++S G + EM G P+ E+ QAA F V + P IP
Sbjct: 183 KGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKVGMFKVHPEIPESMSAEAK 242
Query: 414 ALIEQCWSLQPDKR 427
A I +C+ PDKR
Sbjct: 243 AFILKCFEPDPDKR 256
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 68/213 (31%), Positives = 101/213 (47%), Gaps = 19/213 (8%)
Query: 229 FNREVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIA 288
F REV + L + N+I+ PP+ ++TE GSL L K + L L L
Sbjct: 62 FIREVNAMHSLDHRNLIRLYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFL-LGTLSR 119
Query: 289 IALDIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIACEEVYCDALSDDPGTY- 347
A+ +A GM Y+ S+ IHRDL N+L+ +KI DFG+ AL + Y
Sbjct: 120 YAVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLM------RALPQNDDHYV 173
Query: 348 ---------RWMAPEMIKHKSYGRKVDVYSFGLILWEMVA-GTIPYEEMNPIQAAFAVVN 397
W APE +K +++ D + FG+ LWEM G P+ +N Q +
Sbjct: 174 MQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDK 233
Query: 398 KNLRPAIPGDCPPAMAALIEQCWSLQPDKRPEF 430
+ R P DCP + ++ QCW+ +P+ RP F
Sbjct: 234 EGERLPRPEDCPQDIYNVMVQCWAHKPEDRPTF 266
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 67/211 (31%), Positives = 102/211 (48%), Gaps = 15/211 (7%)
Query: 229 FNREVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIA 288
F REV + L + N+I+ PP+ ++TE GSL L K + L L L
Sbjct: 68 FIREVNAMHSLDHRNLIRLYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFL-LGTLSR 125
Query: 289 IALDIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIACEEVYCDALSDDPGT-- 346
A+ +A GM Y+ S+ IHRDL N+L+ +KI DFG+ + +DD
Sbjct: 126 YAVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGL----MRALPQNDDHXVMQ 181
Query: 347 ------YRWMAPEMIKHKSYGRKVDVYSFGLILWEMVA-GTIPYEEMNPIQAAFAVVNKN 399
+ W APE +K +++ D + FG+ LWEM G P+ +N Q + +
Sbjct: 182 EHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEG 241
Query: 400 LRPAIPGDCPPAMAALIEQCWSLQPDKRPEF 430
R P DCP + ++ QCW+ +P+ RP F
Sbjct: 242 ERLPRPEDCPQDIYNVMVQCWAHKPEDRPTF 272
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 67/211 (31%), Positives = 102/211 (48%), Gaps = 15/211 (7%)
Query: 229 FNREVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIA 288
F REV + L + N+I+ PP+ ++TE GSL L K + L L L
Sbjct: 58 FIREVNAMHSLDHRNLIRLYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFL-LGTLSR 115
Query: 289 IALDIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIACEEVYCDALSDDPGT-- 346
A+ +A GM Y+ S+ IHRDL N+L+ +KI DFG+ + +DD
Sbjct: 116 YAVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGL----MRALPQNDDHXVMQ 171
Query: 347 ------YRWMAPEMIKHKSYGRKVDVYSFGLILWEMVA-GTIPYEEMNPIQAAFAVVNKN 399
+ W APE +K +++ D + FG+ LWEM G P+ +N Q + +
Sbjct: 172 EHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEG 231
Query: 400 LRPAIPGDCPPAMAALIEQCWSLQPDKRPEF 430
R P DCP + ++ QCW+ +P+ RP F
Sbjct: 232 ERLPRPEDCPQDIYNVMVQCWAHKPEDRPTF 262
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 64/250 (25%), Positives = 127/250 (50%), Gaps = 23/250 (9%)
Query: 186 RFAHGAHSRLYHG--IYKDEPVAVKIIRIPDDDENETLAARLEKQFNREVALLSRLHNPN 243
+ GA +Y + + VA++ + + + E + E+ ++ NPN
Sbjct: 28 KIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELII--------NEILVMRENKNPN 79
Query: 244 VIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIALDIARGMEYIHSQ 303
++ ++ + V+ EYL+ GSL + + + ++ A+ + + +E++HS
Sbjct: 80 IVNYLDSYLVGDELWVVMEYLAGGSLTDVVTE---TCMDEGQIAAVCRECLQALEFLHSN 136
Query: 304 GVIHRDLKPENVLIDQEFHLKIADFGIACEEVYCDA--LSDDPGTYRWMAPEMIKHKSYG 361
VIHR++K +N+L+ + +K+ DFG C ++ + S GT WMAPE++ K+YG
Sbjct: 137 QVIHRNIKSDNILLGMDGSVKLTDFGF-CAQITPEQSKRSTMVGTPYWMAPEVVTRKAYG 195
Query: 362 RKVDVYSFGLILWEMVAGTIPYEEMNPIQAAFAVVNKNLRPAIPGDCPPAMAAL----IE 417
KVD++S G++ EM+ G PY NP++A + ++ N P + P ++A+ +
Sbjct: 196 PKVDIWSLGIMAIEMIEGEPPYLNENPLRALY-LIATNGTPELQN--PEKLSAIFRDFLN 252
Query: 418 QCWSLQPDKR 427
+C + +KR
Sbjct: 253 RCLEMDVEKR 262
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 75/279 (26%), Positives = 132/279 (47%), Gaps = 26/279 (9%)
Query: 184 GLRFAHGAHSRLYHGIYKDEPVAVKIIRIPDDDENETLAARLEKQFNREVALLSRLHNPN 243
G + G +Y G + VAVK + D E L++QF++E+ ++++ + N
Sbjct: 36 GNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTE----ELKQQFDQEIKVMAKCQHEN 91
Query: 244 VIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLP--KLIAIALDIARGMEYIH 301
+++ + C++ Y+ GSL L L+ T PL IA A G+ ++H
Sbjct: 92 LVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLD-GTPPLSWHMRCKIAQGAANGINFLH 150
Query: 302 SQGVIHRDLKPENVLIDQEFHLKIADFGIA-CEEVYCDAL--SDDPGTYRWMAPEMIKHK 358
IHRD+K N+L+D+ F KI+DFG+A E + + S GT +MAPE ++ +
Sbjct: 151 ENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMXSRIVGTTAYMAPEALRGE 210
Query: 359 SYGRKVDVYSFGLILWEMVAGTIPYEEMNPIQAAFAV--------------VNKNLRPAI 404
K D+YSFG++L E++ G +E Q + ++K + A
Sbjct: 211 -ITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDIKEEIEDEEKTIEDYIDKKMNDA- 268
Query: 405 PGDCPPAMAALIEQCWSLQPDKRPEFWHIVKVLEQFETS 443
AM ++ QC + +KRP+ + ++L++ S
Sbjct: 269 DSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQEMTAS 307
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 68/213 (31%), Positives = 101/213 (47%), Gaps = 19/213 (8%)
Query: 229 FNREVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIA 288
F REV + L + N+I+ PP+ ++TE GSL L K + L L L
Sbjct: 62 FIREVNAMHSLDHRNLIRLYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFL-LGTLSR 119
Query: 289 IALDIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIACEEVYCDALSDDPGTY- 347
A+ +A GM Y+ S+ IHRDL N+L+ +KI DFG+ AL + Y
Sbjct: 120 YAVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLM------RALPQNDDHYV 173
Query: 348 ---------RWMAPEMIKHKSYGRKVDVYSFGLILWEMVA-GTIPYEEMNPIQAAFAVVN 397
W APE +K +++ D + FG+ LWEM G P+ +N Q +
Sbjct: 174 MQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDK 233
Query: 398 KNLRPAIPGDCPPAMAALIEQCWSLQPDKRPEF 430
+ R P DCP + ++ QCW+ +P+ RP F
Sbjct: 234 EGERLPRPEDCPQDIYNVMVQCWAHKPEDRPTF 266
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 99.4 bits (246), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 68/213 (31%), Positives = 101/213 (47%), Gaps = 19/213 (8%)
Query: 229 FNREVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIA 288
F REV + L + N+I+ PP+ ++TE GSL L K + L L L
Sbjct: 58 FIREVNAMHSLDHRNLIRLYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFL-LGTLSR 115
Query: 289 IALDIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIACEEVYCDALSDDPGTY- 347
A+ +A GM Y+ S+ IHRDL N+L+ +KI DFG+ AL + Y
Sbjct: 116 YAVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLM------RALPQNDDHYV 169
Query: 348 ---------RWMAPEMIKHKSYGRKVDVYSFGLILWEMVA-GTIPYEEMNPIQAAFAVVN 397
W APE +K +++ D + FG+ LWEM G P+ +N Q +
Sbjct: 170 MQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDK 229
Query: 398 KNLRPAIPGDCPPAMAALIEQCWSLQPDKRPEF 430
+ R P DCP + ++ QCW+ +P+ RP F
Sbjct: 230 EGERLPRPEDCPQDIYNVMVQCWAHKPEDRPTF 262
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 99.4 bits (246), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 68/213 (31%), Positives = 101/213 (47%), Gaps = 19/213 (8%)
Query: 229 FNREVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIA 288
F REV + L + N+I+ PP+ ++TE GSL L K + L L L
Sbjct: 68 FIREVNAMHSLDHRNLIRLYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFL-LGTLSR 125
Query: 289 IALDIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIACEEVYCDALSDDPGTY- 347
A+ +A GM Y+ S+ IHRDL N+L+ +KI DFG+ AL + Y
Sbjct: 126 YAVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLM------RALPQNDDHYV 179
Query: 348 ---------RWMAPEMIKHKSYGRKVDVYSFGLILWEMVA-GTIPYEEMNPIQAAFAVVN 397
W APE +K +++ D + FG+ LWEM G P+ +N Q +
Sbjct: 180 MQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDK 239
Query: 398 KNLRPAIPGDCPPAMAALIEQCWSLQPDKRPEF 430
+ R P DCP + ++ QCW+ +P+ RP F
Sbjct: 240 EGERLPRPEDCPQDIYNVMVQCWAHKPEDRPTF 272
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 99.4 bits (246), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 110/216 (50%), Gaps = 19/216 (8%)
Query: 220 TLAARLEKQFNREVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHK 279
TL R + E +L +++P ++K A + +I ++L G L L K
Sbjct: 64 TLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMF 123
Query: 280 TLPLPKLIAIALDIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIACEEV---- 335
T K L +A ++++HS G+I+RDLKPEN+L+D+E H+K+ DFG++ E +
Sbjct: 124 TEEDVKFYLAELALA--LDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEK 181
Query: 336 ----YCDALSDDPGTYRWMAPEMIKHKSYGRKVDVYSFGLILWEMVAGTIPYEEMNPIQA 391
+C GT +MAPE++ + + + D +SFG++++EM+ GT+P++ + +
Sbjct: 182 KAYSFC-------GTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKET 234
Query: 392 AFAVVNKNLRPAIPGDCPPAMAALIEQCWSLQPDKR 427
++ L +P P +L+ + P R
Sbjct: 235 MTMILKAKL--GMPQFLSPEAQSLLRMLFKRNPANR 268
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 99.4 bits (246), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 110/216 (50%), Gaps = 19/216 (8%)
Query: 220 TLAARLEKQFNREVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHK 279
TL R + E +L +++P ++K A + +I ++L G L L K
Sbjct: 65 TLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMF 124
Query: 280 TLPLPKLIAIALDIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIACEEV---- 335
T K L +A ++++HS G+I+RDLKPEN+L+D+E H+K+ DFG++ E +
Sbjct: 125 TEEDVKFYLAELALA--LDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEK 182
Query: 336 ----YCDALSDDPGTYRWMAPEMIKHKSYGRKVDVYSFGLILWEMVAGTIPYEEMNPIQA 391
+C GT +MAPE++ + + + D +SFG++++EM+ GT+P++ + +
Sbjct: 183 KAYSFC-------GTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKET 235
Query: 392 AFAVVNKNLRPAIPGDCPPAMAALIEQCWSLQPDKR 427
++ L +P P +L+ + P R
Sbjct: 236 MTMILKAKL--GMPQFLSPEAQSLLRMLFKRNPANR 269
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 99.4 bits (246), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 110/216 (50%), Gaps = 19/216 (8%)
Query: 220 TLAARLEKQFNREVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHK 279
TL R + E +L +++P ++K A + +I ++L G L L K
Sbjct: 64 TLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMF 123
Query: 280 TLPLPKLIAIALDIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIACEEV---- 335
T K L +A ++++HS G+I+RDLKPEN+L+D+E H+K+ DFG++ E +
Sbjct: 124 TEEDVKFYLAELALA--LDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEK 181
Query: 336 ----YCDALSDDPGTYRWMAPEMIKHKSYGRKVDVYSFGLILWEMVAGTIPYEEMNPIQA 391
+C GT +MAPE++ + + + D +SFG++++EM+ GT+P++ + +
Sbjct: 182 KAYSFC-------GTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKET 234
Query: 392 AFAVVNKNLRPAIPGDCPPAMAALIEQCWSLQPDKR 427
++ L +P P +L+ + P R
Sbjct: 235 MTMILKAKL--GMPQFLSPEAQSLLRMLFKRNPANR 268
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 99.4 bits (246), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 68/213 (31%), Positives = 101/213 (47%), Gaps = 19/213 (8%)
Query: 229 FNREVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIA 288
F REV + L + N+I+ PP+ ++TE GSL L K + L L L
Sbjct: 58 FIREVNAMHSLDHRNLIRLYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFL-LGTLSR 115
Query: 289 IALDIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIACEEVYCDALSDDPGTY- 347
A+ +A GM Y+ S+ IHRDL N+L+ +KI DFG+ AL + Y
Sbjct: 116 YAVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLM------RALPQNDDHYV 169
Query: 348 ---------RWMAPEMIKHKSYGRKVDVYSFGLILWEMVA-GTIPYEEMNPIQAAFAVVN 397
W APE +K +++ D + FG+ LWEM G P+ +N Q +
Sbjct: 170 MQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDK 229
Query: 398 KNLRPAIPGDCPPAMAALIEQCWSLQPDKRPEF 430
+ R P DCP + ++ QCW+ +P+ RP F
Sbjct: 230 EGERLPRPEDCPQDIYNVMVQCWAHKPEDRPTF 262
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 99.0 bits (245), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 67/230 (29%), Positives = 110/230 (47%), Gaps = 23/230 (10%)
Query: 229 FNREVALLSRLHNPNVIKFVAAC--KKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKL 286
+ +E+ +L L++ ++IK+ C + ++ EY+ GSLR YL + ++ L +L
Sbjct: 63 WKQEIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYLPR---HSIGLAQL 119
Query: 287 IAIALDIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIACE----EVYCDALSD 342
+ A I GM Y+HSQ IHR+L NVL+D + +KI DFG+A Y D
Sbjct: 120 LLFAQQICEGMAYLHSQHYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVRED 179
Query: 343 DPGTYRWMAPEMIKHKSYGRKVDVYSFGLILWEMVAG--------TIPYEEMNPIQAAFA 394
W APE +K + DV+SFG+ L+E++ T E + Q
Sbjct: 180 GDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMT 239
Query: 395 V------VNKNLRPAIPGDCPPAMAALIEQCWSLQPDKRPEFWHIVKVLE 438
V + + R P CP + L++ CW + RP F +++ +L+
Sbjct: 240 VLRLTELLERGERLPRPDKCPCEVYHLMKNCWETEASFRPTFENLIPILK 289
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 98.6 bits (244), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 74/279 (26%), Positives = 131/279 (46%), Gaps = 26/279 (9%)
Query: 184 GLRFAHGAHSRLYHGIYKDEPVAVKIIRIPDDDENETLAARLEKQFNREVALLSRLHNPN 243
G + G +Y G + VAVK + D E L++QF++E+ ++++ + N
Sbjct: 36 GNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTE----ELKQQFDQEIKVMAKCQHEN 91
Query: 244 VIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLP--KLIAIALDIARGMEYIH 301
+++ + C++ Y+ GSL L L+ T PL IA A G+ ++H
Sbjct: 92 LVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLD-GTPPLSWHMRCKIAQGAANGINFLH 150
Query: 302 SQGVIHRDLKPENVLIDQEFHLKIADFGIA-CEEVYCDALSDD--PGTYRWMAPEMIKHK 358
IHRD+K N+L+D+ F KI+DFG+A E + + GT +MAPE ++ +
Sbjct: 151 ENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMXXRIVGTTAYMAPEALRGE 210
Query: 359 SYGRKVDVYSFGLILWEMVAGTIPYEEMNPIQAAFAV--------------VNKNLRPAI 404
K D+YSFG++L E++ G +E Q + ++K + A
Sbjct: 211 -ITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDIKEEIEDEEKTIEDYIDKKMNDA- 268
Query: 405 PGDCPPAMAALIEQCWSLQPDKRPEFWHIVKVLEQFETS 443
AM ++ QC + +KRP+ + ++L++ S
Sbjct: 269 DSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQEMTAS 307
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 98.6 bits (244), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 100/206 (48%), Gaps = 5/206 (2%)
Query: 223 ARLEKQFNREVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLP 282
A +E Q REV + S L +PN+++ +I EY G++ L KL
Sbjct: 50 AGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL--SKFD 107
Query: 283 LPKLIAIALDIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIACEEVYCDALSD 342
+ ++A + Y HS+ VIHRD+KPEN+L+ LKIADFG +C +
Sbjct: 108 EQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSC-HAPSSRRTT 166
Query: 343 DPGTYRWMAPEMIKHKSYGRKVDVYSFGLILWEMVAGTIPYEEMNPIQAAFAVVNKNLRP 402
GT ++ PEMI+ + + KVD++S G++ +E + G P+ E N Q + +++ +
Sbjct: 167 LSGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF-EANTYQETYKRISR-VEF 224
Query: 403 AIPGDCPPAMAALIEQCWSLQPDKRP 428
P LI + P +RP
Sbjct: 225 TFPDFVTEGARDLISRLLKHNPSQRP 250
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 98.6 bits (244), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 76/267 (28%), Positives = 123/267 (46%), Gaps = 49/267 (18%)
Query: 205 VAVKIIR-IPDDDENETLAARLEKQFNREVALLSRL-HNPNVIKFVAACK-KPPVYCVIT 261
VAVK+++ D E E L + E+ ++++L + N++ + AC P+Y +I
Sbjct: 78 VAVKMLKEKADSSEREALMS--------ELKMMTQLGSHENIVNLLGACTLSGPIY-LIF 128
Query: 262 EYLSEGSLRAYLH-----------------KLEHK----TLPLPKLIAIALDIARGMEYI 300
EY G L YL +LE + L L+ A +A+GME++
Sbjct: 129 EYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFL 188
Query: 301 HSQGVIHRDLKPENVLIDQEFHLKIADFGIACEEVYCDALSDDPGTYR--------WMAP 352
+ +HRDL NVL+ +KI DFG+A D +SD R WMAP
Sbjct: 189 EFKSCVHRDLAARNVLVTHGKVVKICDFGLA-----RDIMSDSNYVVRGNARLPVKWMAP 243
Query: 353 EMIKHKSYGRKVDVYSFGLILWEMVA-GTIPYEEMNPIQAAF-AVVNKNLRPAIPGDCPP 410
E + Y K DV+S+G++LWE+ + G PY + P+ A F ++ + P
Sbjct: 244 ESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGI-PVDANFYKLIQNGFKMDQPFYATE 302
Query: 411 AMAALIEQCWSLQPDKRPEFWHIVKVL 437
+ +++ CW+ KRP F ++ L
Sbjct: 303 EIYIIMQSCWAFDSRKRPSFPNLTSFL 329
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 98.6 bits (244), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 60/189 (31%), Positives = 112/189 (59%), Gaps = 17/189 (8%)
Query: 202 DEPVAVKIIR----IPDDDENETLAARLEKQFNREVALLSRLHNPNVIKFVAACKKPPVY 257
+E A+KI++ I DDD T+ + R +ALL + P + + + +
Sbjct: 44 EELYAIKILKKDVVIQDDDVECTMVEK------RVLALLDK--PPFLTQLHSCFQTVDRL 95
Query: 258 CVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIALDIARGMEYIHSQGVIHRDLKPENVLI 317
+ EY++ G L ++ ++ P+ + A +I+ G+ ++H +G+I+RDLK +NV++
Sbjct: 96 YFVMEYVNGGDLMYHIQQV--GKFKEPQAVFYAAEISIGLFFLHKRGIIYRDLKLDNVML 153
Query: 318 DQEFHLKIADFGIACEEVYCDALSDDP--GTYRWMAPEMIKHKSYGRKVDVYSFGLILWE 375
D E H+KIADFG+ C+E D ++ GT ++APE+I ++ YG+ VD +++G++L+E
Sbjct: 154 DSEGHIKIADFGM-CKEHMMDGVTTREFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYE 212
Query: 376 MVAGTIPYE 384
M+AG P++
Sbjct: 213 MLAGQPPFD 221
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 98.2 bits (243), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 58/189 (30%), Positives = 101/189 (53%), Gaps = 22/189 (11%)
Query: 224 RLEKQFNREVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPL 283
R E FN EV ++ H+ NV+ ++ V+ E+L G+L + H +
Sbjct: 85 RRELLFN-EVVIMRDYHHDNVVDMYSSYLVGDELWVVMEFLEGGALTDIV---THTRMNE 140
Query: 284 PKLIAIALDIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIACEEVYCDALSDD 343
++ + L + R + Y+H+QGVIHRD+K +++L+ + +K++DFG +C +S +
Sbjct: 141 EQIATVCLSVLRALSYLHNQGVIHRDIKSDSILLTSDGRIKLSDFG------FCAQVSKE 194
Query: 344 -------PGTYRWMAPEMIKHKSYGRKVDVYSFGLILWEMVAGTIPYEEMNPIQAAFAVV 396
GT WMAPE+I YG +VD++S G+++ EM+ G PY P+QA
Sbjct: 195 VPKRKXLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPPYFNEPPLQAM---- 250
Query: 397 NKNLRPAIP 405
+ +R ++P
Sbjct: 251 -RRIRDSLP 258
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 98.2 bits (243), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 74/279 (26%), Positives = 131/279 (46%), Gaps = 26/279 (9%)
Query: 184 GLRFAHGAHSRLYHGIYKDEPVAVKIIRIPDDDENETLAARLEKQFNREVALLSRLHNPN 243
G + G +Y G + VAVK + D E L++QF++E+ ++++ + N
Sbjct: 30 GNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTE----ELKQQFDQEIKVMAKCQHEN 85
Query: 244 VIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLP--KLIAIALDIARGMEYIH 301
+++ + C++ Y+ GSL L L+ T PL IA A G+ ++H
Sbjct: 86 LVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLD-GTPPLSWHMRCKIAQGAANGINFLH 144
Query: 302 SQGVIHRDLKPENVLIDQEFHLKIADFGIA-CEEVYCDALSDD--PGTYRWMAPEMIKHK 358
IHRD+K N+L+D+ F KI+DFG+A E + + GT +MAPE ++ +
Sbjct: 145 ENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQXVMXXRIVGTTAYMAPEALRGE 204
Query: 359 SYGRKVDVYSFGLILWEMVAGTIPYEEMNPIQAAFAV--------------VNKNLRPAI 404
K D+YSFG++L E++ G +E Q + ++K + A
Sbjct: 205 -ITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDIKEEIEDEEKTIEDYIDKKMNDA- 262
Query: 405 PGDCPPAMAALIEQCWSLQPDKRPEFWHIVKVLEQFETS 443
AM ++ QC + +KRP+ + ++L++ S
Sbjct: 263 DSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQEMTAS 301
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 116/224 (51%), Gaps = 10/224 (4%)
Query: 205 VAVKIIRIPDDDENETLAARLEKQFNREVALLSRLHNPNVIKFVAACKKPPVYCVITEYL 264
VAVKI+ + + + + + RE+ L +P++IK P + ++ EY+
Sbjct: 39 VAVKIL-----NRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYV 93
Query: 265 SEGSLRAYLHKLEHKTLPLPKLIAIALDIARGMEYIHSQGVIHRDLKPENVLIDQEFHLK 324
S G L Y+ K H + + + I ++Y H V+HRDLKPENVL+D + K
Sbjct: 94 SGGELFDYICK--HGRVEEMEARRLFQQILSAVDYCHRHMVVHRDLKPENVLLDAHMNAK 151
Query: 325 IADFGIACEEVYCDALSDDPGTYRWMAPEMIKHKSY-GRKVDVYSFGLILWEMVAGTIPY 383
IADFG++ + L D G+ + APE+I + Y G +VD++S G+IL+ ++ GT+P+
Sbjct: 152 IADFGLSNMMSDGEFLRDSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPF 211
Query: 384 EEMNPIQAAFAVVNKNLRPAIPGDCPPAMAALIEQCWSLQPDKR 427
++ + + F + + IP ++A L+ + P KR
Sbjct: 212 DDEH-VPTLFKKIRGGVF-YIPEYLNRSVATLLMHMLQVDPLKR 253
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 66/230 (28%), Positives = 110/230 (47%), Gaps = 23/230 (10%)
Query: 229 FNREVALLSRLHNPNVIKFVAAC--KKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKL 286
+ +E+ +L L++ ++IK+ C + ++ EY+ GSLR YL + ++ L +L
Sbjct: 63 WKQEIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYLPR---HSIGLAQL 119
Query: 287 IAIALDIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIACE----EVYCDALSD 342
+ A I GM Y+H+Q IHR+L NVL+D + +KI DFG+A Y D
Sbjct: 120 LLFAQQICEGMAYLHAQHYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVRED 179
Query: 343 DPGTYRWMAPEMIKHKSYGRKVDVYSFGLILWEMVAG--------TIPYEEMNPIQAAFA 394
W APE +K + DV+SFG+ L+E++ T E + Q
Sbjct: 180 GDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMT 239
Query: 395 V------VNKNLRPAIPGDCPPAMAALIEQCWSLQPDKRPEFWHIVKVLE 438
V + + R P CP + L++ CW + RP F +++ +L+
Sbjct: 240 VLRLTELLERGERLPRPDKCPCEVYHLMKNCWETEASFRPTFENLIPILK 289
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 54/162 (33%), Positives = 88/162 (54%), Gaps = 6/162 (3%)
Query: 281 LPLPKLIAIALDIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIACEEVYCDAL 340
+ + LI+ + +ARGME++ S+ IHRDL N+L+ + +KI DFG+A ++Y +
Sbjct: 196 ITMEDLISYSFQVARGMEFLSSRKCIHRDLAARNILLSENNVVKICDFGLA-RDIYKNPD 254
Query: 341 SDDPGTYR----WMAPEMIKHKSYGRKVDVYSFGLILWEMVA-GTIPYEEMNPIQAAFAV 395
G R WMAPE I K Y K DV+S+G++LWE+ + G PY + + +
Sbjct: 255 YVRKGDTRLPLKWMAPESIFDKIYSTKSDVWSYGVLLWEIFSLGGSPYPGVQMDEDFCSR 314
Query: 396 VNKNLRPAIPGDCPPAMAALIEQCWSLQPDKRPEFWHIVKVL 437
+ + +R P P + ++ CW P +RP F +V+ L
Sbjct: 315 LREGMRMRAPEYSTPEIYQIMLDCWHRDPKERPRFAELVEKL 356
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 100/206 (48%), Gaps = 5/206 (2%)
Query: 223 ARLEKQFNREVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLP 282
A +E Q REV + S L +PN+++ +I EY G++ L KL
Sbjct: 54 AGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL--SKFD 111
Query: 283 LPKLIAIALDIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIACEEVYCDALSD 342
+ ++A + Y HS+ VIHRD+KPEN+L+ LKIADFG + +D
Sbjct: 112 EQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSV-HAPSSRRTD 170
Query: 343 DPGTYRWMAPEMIKHKSYGRKVDVYSFGLILWEMVAGTIPYEEMNPIQAAFAVVNKNLRP 402
GT ++ PEMI+ + + KVD++S G++ +E + G P+ E N Q + +++ +
Sbjct: 171 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF-EANTYQETYKRISR-VEF 228
Query: 403 AIPGDCPPAMAALIEQCWSLQPDKRP 428
P LI + P +RP
Sbjct: 229 TFPDFVTEGARDLISRLLKHNPSQRP 254
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 100/206 (48%), Gaps = 5/206 (2%)
Query: 223 ARLEKQFNREVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLP 282
A +E Q REV + S L +PN+++ +I EY G++ L KL
Sbjct: 50 AGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL--SKFD 107
Query: 283 LPKLIAIALDIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIACEEVYCDALSD 342
+ ++A + Y HS+ VIHRD+KPEN+L+ LKIADFG + +D
Sbjct: 108 EQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSV-HAPSSRRTD 166
Query: 343 DPGTYRWMAPEMIKHKSYGRKVDVYSFGLILWEMVAGTIPYEEMNPIQAAFAVVNKNLRP 402
GT ++ PEMI+ + + KVD++S G++ +E + G P+ E N Q + +++ +
Sbjct: 167 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF-EANTYQETYKRISR-VEF 224
Query: 403 AIPGDCPPAMAALIEQCWSLQPDKRP 428
P LI + P +RP
Sbjct: 225 TFPDFVTEGARDLISRLLKHNPSQRP 250
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 88/154 (57%)
Query: 232 EVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIAL 291
E +L ++++ V+ A + C++ ++ G L+ +++ + P + + A
Sbjct: 234 EKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAA 293
Query: 292 DIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIACEEVYCDALSDDPGTYRWMA 351
+I G+E +H + +++RDLKPEN+L+D H++I+D G+A + GT +MA
Sbjct: 294 EICCGLEDLHRERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIKGRVGTVGYMA 353
Query: 352 PEMIKHKSYGRKVDVYSFGLILWEMVAGTIPYEE 385
PE++K++ Y D ++ G +L+EM+AG P+++
Sbjct: 354 PEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQ 387
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 100/206 (48%), Gaps = 5/206 (2%)
Query: 223 ARLEKQFNREVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLP 282
A +E Q REV + S L +PN+++ +I EY G++ L KL
Sbjct: 49 AGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL--SKFD 106
Query: 283 LPKLIAIALDIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIACEEVYCDALSD 342
+ ++A + Y HS+ VIHRD+KPEN+L+ LKIADFG + +D
Sbjct: 107 EQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSV-HAPSSRRTD 165
Query: 343 DPGTYRWMAPEMIKHKSYGRKVDVYSFGLILWEMVAGTIPYEEMNPIQAAFAVVNKNLRP 402
GT ++ PEMI+ + + KVD++S G++ +E + G P+ E N Q + +++ +
Sbjct: 166 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF-EANTYQETYKRISR-VEF 223
Query: 403 AIPGDCPPAMAALIEQCWSLQPDKRP 428
P LI + P +RP
Sbjct: 224 TFPDFVTEGARDLISRLLKHNPSQRP 249
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 82/299 (27%), Positives = 135/299 (45%), Gaps = 59/299 (19%)
Query: 187 FAHGAHSRLYHGIYKDEPVAVKIIRIPDDDENETLAARLEKQFNREVALLSR--LHNPNV 244
G ++ G ++ E VAVKI ++R E+ + RE + L + N+
Sbjct: 37 IGKGRFGEVWRGKWRGEEVAVKI-----------FSSREERSWFREAEIYQTVMLRHENI 85
Query: 245 IKFVAACKKP----PVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIALDIARGMEYI 300
+ F+AA K ++++Y GSL YL++ T+ + +I +AL A G+ ++
Sbjct: 86 LGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRY---TVTVEGMIKLALSTASGLAHL 142
Query: 301 H-----SQG---VIHRDLKPENVLIDQEFHLKIADFGIACE-EVYCDALSDDP----GTY 347
H +QG + HRDLK +N+L+ + IAD G+A + D + P GT
Sbjct: 143 HMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTK 202
Query: 348 RWMAPEMI------KHKSYGRKVDVYSFGLILWEM-----VAGT-----IPYEEMNPIQA 391
R+MAPE++ KH ++ D+Y+ GL+ WE+ + G +PY ++ P
Sbjct: 203 RYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDP 262
Query: 392 AF-----AVVNKNLRPAIPG---DCPP--AMAALIEQCWSLQPDKRPEFWHIVKVLEQF 440
+ V + LRP IP C MA ++ +CW R I K L Q
Sbjct: 263 SVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQL 321
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 74/295 (25%), Positives = 132/295 (44%), Gaps = 31/295 (10%)
Query: 164 RVNAVDAADEHTVDLSQLFLGLRFAHGAHSRLYHGIYKDEPVAVKIIRIPDDDENETLAA 223
RV VD +E T + FL HG ++Y G+ +D R P+ +
Sbjct: 28 RVPLVDL-EEATNNFDHKFL---IGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFE 83
Query: 224 RLEKQFNREVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPL 283
+ LS +P+++ + C + +I +Y+ G+L+ +L+ + T+ +
Sbjct: 84 TEIET-------LSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSM 136
Query: 284 P--KLIAIALDIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIACEEVYCDALS 341
+ + I + ARG+ Y+H++ +IHRD+K N+L+D+ F KI DFGI+ + D
Sbjct: 137 SWEQRLEICIGAARGLHYLHTRAIIHRDVKSINILLDENFVPKITDFGISKKGTELDQTH 196
Query: 342 DD---PGTYRWMAPEMIKHKSYGRKVDVYSFGLILWEM------VAGTIPYEEMNPIQAA 392
GT ++ PE K DVYSFG++L+E+ + ++P E +N + A
Sbjct: 197 LXXVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWA 256
Query: 393 F---------AVVNKNLRPAIPGDCPPAMAALIEQCWSLQPDKRPEFWHIVKVLE 438
+V+ NL I + +C +L + RP ++ LE
Sbjct: 257 VESHNNGQLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLE 311
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 88/154 (57%)
Query: 232 EVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIAL 291
E +L ++++ V+ A + C++ ++ G L+ +++ + P + + A
Sbjct: 234 EKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAA 293
Query: 292 DIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIACEEVYCDALSDDPGTYRWMA 351
+I G+E +H + +++RDLKPEN+L+D H++I+D G+A + GT +MA
Sbjct: 294 EICCGLEDLHRERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIKGRVGTVGYMA 353
Query: 352 PEMIKHKSYGRKVDVYSFGLILWEMVAGTIPYEE 385
PE++K++ Y D ++ G +L+EM+AG P+++
Sbjct: 354 PEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQ 387
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 95.9 bits (237), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 66/224 (29%), Positives = 116/224 (51%), Gaps = 10/224 (4%)
Query: 205 VAVKIIRIPDDDENETLAARLEKQFNREVALLSRLHNPNVIKFVAACKKPPVYCVITEYL 264
VAVKI+ + + + + + RE+ L +P++IK P ++ EY+
Sbjct: 44 VAVKIL-----NRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFMVMEYV 98
Query: 265 SEGSLRAYLHKLEHKTLPLPKLIAIALDIARGMEYIHSQGVIHRDLKPENVLIDQEFHLK 324
S G L Y+ K + L + + I G++Y H V+HRDLKPENVL+D + K
Sbjct: 99 SGGELFDYICK--NGRLDEKESRRLFQQILSGVDYCHRHMVVHRDLKPENVLLDAHMNAK 156
Query: 325 IADFGIACEEVYCDALSDDPGTYRWMAPEMIKHKSY-GRKVDVYSFGLILWEMVAGTIPY 383
IADFG++ + L G+ + APE+I + Y G +VD++S G+IL+ ++ GT+P+
Sbjct: 157 IADFGLSNMMSDGEFLRXSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPF 216
Query: 384 EEMNPIQAAFAVVNKNLRPAIPGDCPPAMAALIEQCWSLQPDKR 427
++ + + F + + P P++ +L++ + P KR
Sbjct: 217 DD-DHVPTLFKKICDGIF-YTPQYLNPSVISLLKHMLQVDPMKR 258
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 95.9 bits (237), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 113/217 (52%), Gaps = 21/217 (9%)
Query: 220 TLAARLEKQFNREVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHK 279
TL R + E +L+ +++P V+K A + +I ++L G L +L +
Sbjct: 68 TLKVRDRVRTKMERDILADVNHPFVVKLHYAFQTEGKLYLILDFLRGGDL---FTRLSKE 124
Query: 280 TLPLPKLIAIAL-DIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIACEEV--- 335
+ + + L ++A G++++HS G+I+RDLKPEN+L+D+E H+K+ DFG++ E +
Sbjct: 125 VMFTEEDVKFYLAELALGLDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKEAIDHE 184
Query: 336 -----YCDALSDDPGTYRWMAPEMIKHKSYGRKVDVYSFGLILWEMVAGTIPYEEMNPIQ 390
+C GT +MAPE++ + + D +S+G++++EM+ G++P++ + +
Sbjct: 185 KKAYSFC-------GTVEYMAPEVVNRQGHSHSADWWSYGVLMFEMLTGSLPFQGKDRKE 237
Query: 391 AAFAVVNKNLRPAIPGDCPPAMAALIEQCWSLQPDKR 427
++ L +P +L+ + P R
Sbjct: 238 TMTLILKAKL--GMPQFLSTEAQSLLRALFKRNPANR 272
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 95.5 bits (236), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 81/299 (27%), Positives = 135/299 (45%), Gaps = 59/299 (19%)
Query: 187 FAHGAHSRLYHGIYKDEPVAVKIIRIPDDDENETLAARLEKQFNREVALLSR--LHNPNV 244
G ++ G ++ E VAVKI ++R E+ + RE + L + N+
Sbjct: 50 IGKGRFGEVWRGKWRGEEVAVKI-----------FSSREERSWFREAEIYQTVMLRHENI 98
Query: 245 IKFVAACKKP----PVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIALDIARGMEYI 300
+ F+AA K ++++Y GSL YL++ T+ + +I +AL A G+ ++
Sbjct: 99 LGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRY---TVTVEGMIKLALSTASGLAHL 155
Query: 301 H-----SQG---VIHRDLKPENVLIDQEFHLKIADFGIACE-EVYCDALSDDP----GTY 347
H +QG + HRDLK +N+L+ + IAD G+A + D + P GT
Sbjct: 156 HMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTK 215
Query: 348 RWMAPEMI------KHKSYGRKVDVYSFGLILWEM-----VAGT-----IPYEEMNPIQA 391
R+MAPE++ KH ++ D+Y+ GL+ WE+ + G +PY ++ P
Sbjct: 216 RYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDP 275
Query: 392 AF-----AVVNKNLRPAIPG-----DCPPAMAALIEQCWSLQPDKRPEFWHIVKVLEQF 440
+ V + LRP IP + MA ++ +CW R I K L Q
Sbjct: 276 SVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQL 334
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 95.5 bits (236), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 56/162 (34%), Positives = 86/162 (53%), Gaps = 6/162 (3%)
Query: 281 LPLPKLIAIALDIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIACEEVYCDAL 340
L L LI + +A+GME++ S+ IHRDL N+L+ ++ +KI DFG+A ++Y D
Sbjct: 188 LTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLA-RDIYKDPD 246
Query: 341 SDDPGTYR----WMAPEMIKHKSYGRKVDVYSFGLILWEMVA-GTIPYEEMNPIQAAFAV 395
G R WMAPE I + Y + DV+SFG++LWE+ + G PY + +
Sbjct: 247 YVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRR 306
Query: 396 VNKNLRPAIPGDCPPAMAALIEQCWSLQPDKRPEFWHIVKVL 437
+ + R P P M + CW +P +RP F +V+ L
Sbjct: 307 LKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHL 348
Score = 30.4 bits (67), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 41/87 (47%), Gaps = 16/87 (18%)
Query: 234 ALLSRL-------HNPNVIKFVAACKKP--PVYCVITEYLSEGSLRAYLHKLEHKTLPLP 284
AL+S L H+ NV+ + AC KP P+ VI E+ G+L YL ++ +P
Sbjct: 69 ALMSELKILIHIGHHLNVVNLLGACTKPGGPLM-VIVEFCKFGNLSTYLRSKRNEFVPYK 127
Query: 285 KLIAIALDIARGMEYIHSQGVIHRDLK 311
A +G +Y+ G I DLK
Sbjct: 128 TKGA---RFRQGKDYV---GAIPVDLK 148
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 95.5 bits (236), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 100/206 (48%), Gaps = 5/206 (2%)
Query: 223 ARLEKQFNREVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLP 282
A +E Q REV + S L +PN+++ +I EY G++ L KL
Sbjct: 49 AGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL--SKFD 106
Query: 283 LPKLIAIALDIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIACEEVYCDALSD 342
+ ++A + Y HS+ VIHRD+KPEN+L+ LKIADFG + +D
Sbjct: 107 EQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSV-HAPSSRRTD 165
Query: 343 DPGTYRWMAPEMIKHKSYGRKVDVYSFGLILWEMVAGTIPYEEMNPIQAAFAVVNKNLRP 402
GT ++ PEMI+ + + KVD++S G++ +E + G P+ E N Q + +++ +
Sbjct: 166 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF-EANTYQETYKRISR-VEF 223
Query: 403 AIPGDCPPAMAALIEQCWSLQPDKRP 428
P LI + P +RP
Sbjct: 224 TFPDFVTEGARDLISRLLKHNPSQRP 249
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 95.5 bits (236), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 56/162 (34%), Positives = 86/162 (53%), Gaps = 6/162 (3%)
Query: 281 LPLPKLIAIALDIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIACEEVYCDAL 340
L L LI + +A+GME++ S+ IHRDL N+L+ ++ +KI DFG+A ++Y D
Sbjct: 190 LTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLA-RDIYKDPD 248
Query: 341 SDDPGTYR----WMAPEMIKHKSYGRKVDVYSFGLILWEMVA-GTIPYEEMNPIQAAFAV 395
G R WMAPE I + Y + DV+SFG++LWE+ + G PY + +
Sbjct: 249 YVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRR 308
Query: 396 VNKNLRPAIPGDCPPAMAALIEQCWSLQPDKRPEFWHIVKVL 437
+ + R P P M + CW +P +RP F +V+ L
Sbjct: 309 LKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHL 350
Score = 30.0 bits (66), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 41/87 (47%), Gaps = 16/87 (18%)
Query: 234 ALLSRL-------HNPNVIKFVAACKKP--PVYCVITEYLSEGSLRAYLHKLEHKTLPLP 284
AL+S L H+ NV+ + AC KP P+ VI E+ G+L YL ++ +P
Sbjct: 71 ALMSELKILIHIGHHLNVVNLLGACTKPGGPLM-VIVEFCKFGNLSTYLRSKRNEFVPYK 129
Query: 285 KLIAIALDIARGMEYIHSQGVIHRDLK 311
A +G +Y+ G I DLK
Sbjct: 130 TKGA---RFRQGKDYV---GAIPVDLK 150
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 95.5 bits (236), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 102/213 (47%), Gaps = 5/213 (2%)
Query: 223 ARLEKQFNREVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLP 282
A +E Q REV + S L +PN+++ +I EY G++ L KL
Sbjct: 75 AGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL--SKFD 132
Query: 283 LPKLIAIALDIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIACEEVYCDALSD 342
+ ++A + Y HS+ VIHRD+KPEN+L+ LKIADFG + D
Sbjct: 133 EQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSV-HAPSSRRDD 191
Query: 343 DPGTYRWMAPEMIKHKSYGRKVDVYSFGLILWEMVAGTIPYEEMNPIQAAFAVVNKNLRP 402
GT ++ PEMI+ + + KVD++S G++ +E + G P+ E N Q + +++ +
Sbjct: 192 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF-EANTYQETYKRISR-VEF 249
Query: 403 AIPGDCPPAMAALIEQCWSLQPDKRPEFWHIVK 435
P LI + P +RP +++
Sbjct: 250 TFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 282
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 95.5 bits (236), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 102/208 (49%), Gaps = 9/208 (4%)
Query: 223 ARLEKQFNREVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLP 282
A +E Q REV + S L +PN+++ +I EY G++ L KL
Sbjct: 50 AGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL--SKFD 107
Query: 283 LPKLIAIALDIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIACEEVYCDALSD 342
+ ++A + Y HS+ VIHRD+KPEN+L+ LKIADFG + V+ +
Sbjct: 108 EQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS---VHAPSSRR 164
Query: 343 DP--GTYRWMAPEMIKHKSYGRKVDVYSFGLILWEMVAGTIPYEEMNPIQAAFAVVNKNL 400
D GT ++ PEMI+ + + KVD++S G++ +E + G P+ E N Q + +++ +
Sbjct: 165 DTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF-EANTYQETYKRISR-V 222
Query: 401 RPAIPGDCPPAMAALIEQCWSLQPDKRP 428
P LI + P +RP
Sbjct: 223 EFTFPDFVTEGARDLISRLLKHNPSQRP 250
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 95.5 bits (236), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 82/299 (27%), Positives = 135/299 (45%), Gaps = 59/299 (19%)
Query: 187 FAHGAHSRLYHGIYKDEPVAVKIIRIPDDDENETLAARLEKQFNREVALLSR--LHNPNV 244
G ++ G ++ E VAVKI ++R E+ + RE + L + N+
Sbjct: 17 IGKGRFGEVWRGKWRGEEVAVKI-----------FSSREERSWFREAEIYQTVMLRHENI 65
Query: 245 IKFVAACKKP----PVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIALDIARGMEYI 300
+ F+AA K ++++Y GSL YL++ T+ + +I +AL A G+ ++
Sbjct: 66 LGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRY---TVTVEGMIKLALSTASGLAHL 122
Query: 301 H-----SQG---VIHRDLKPENVLIDQEFHLKIADFGIACE-EVYCDALSDDP----GTY 347
H +QG + HRDLK +N+L+ + IAD G+A + D + P GT
Sbjct: 123 HMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTK 182
Query: 348 RWMAPEMI------KHKSYGRKVDVYSFGLILWEM-----VAGT-----IPYEEMNPIQA 391
R+MAPE++ KH ++ D+Y+ GL+ WE+ + G +PY ++ P
Sbjct: 183 RYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDP 242
Query: 392 AF-----AVVNKNLRPAIPG---DCPP--AMAALIEQCWSLQPDKRPEFWHIVKVLEQF 440
+ V + LRP IP C MA ++ +CW R I K L Q
Sbjct: 243 SVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQL 301
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 95.1 bits (235), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 82/299 (27%), Positives = 135/299 (45%), Gaps = 59/299 (19%)
Query: 187 FAHGAHSRLYHGIYKDEPVAVKIIRIPDDDENETLAARLEKQFNREVALLSR--LHNPNV 244
G ++ G ++ E VAVKI ++R E+ + RE + L + N+
Sbjct: 12 IGKGRFGEVWRGKWRGEEVAVKI-----------FSSREERSWFREAEIYQTVMLRHENI 60
Query: 245 IKFVAACKKP----PVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIALDIARGMEYI 300
+ F+AA K ++++Y GSL YL++ T+ + +I +AL A G+ ++
Sbjct: 61 LGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRY---TVTVEGMIKLALSTASGLAHL 117
Query: 301 H-----SQG---VIHRDLKPENVLIDQEFHLKIADFGIACE-EVYCDALSDDP----GTY 347
H +QG + HRDLK +N+L+ + IAD G+A + D + P GT
Sbjct: 118 HMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTK 177
Query: 348 RWMAPEMI------KHKSYGRKVDVYSFGLILWEM-----VAGT-----IPYEEMNPIQA 391
R+MAPE++ KH ++ D+Y+ GL+ WE+ + G +PY ++ P
Sbjct: 178 RYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDP 237
Query: 392 AF-----AVVNKNLRPAIPG---DCPP--AMAALIEQCWSLQPDKRPEFWHIVKVLEQF 440
+ V + LRP IP C MA ++ +CW R I K L Q
Sbjct: 238 SVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQL 296
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 95.1 bits (235), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 56/162 (34%), Positives = 86/162 (53%), Gaps = 6/162 (3%)
Query: 281 LPLPKLIAIALDIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIACEEVYCDAL 340
L L LI + +A+GME++ S+ IHRDL N+L+ ++ +KI DFG+A ++Y D
Sbjct: 195 LTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLA-RDIYKDPD 253
Query: 341 SDDPGTYR----WMAPEMIKHKSYGRKVDVYSFGLILWEMVA-GTIPYEEMNPIQAAFAV 395
G R WMAPE I + Y + DV+SFG++LWE+ + G PY + +
Sbjct: 254 YVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRR 313
Query: 396 VNKNLRPAIPGDCPPAMAALIEQCWSLQPDKRPEFWHIVKVL 437
+ + R P P M + CW +P +RP F +V+ L
Sbjct: 314 LKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHL 355
Score = 30.4 bits (67), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 41/87 (47%), Gaps = 16/87 (18%)
Query: 234 ALLSRL-------HNPNVIKFVAACKKP--PVYCVITEYLSEGSLRAYLHKLEHKTLPLP 284
AL+S L H+ NV+ + AC KP P+ VI E+ G+L YL ++ +P
Sbjct: 76 ALMSELKILIHIGHHLNVVNLLGACTKPGGPLM-VIVEFCKFGNLSTYLRSKRNEFVPYK 134
Query: 285 KLIAIALDIARGMEYIHSQGVIHRDLK 311
A +G +Y+ G I DLK
Sbjct: 135 TKGA---RFRQGKDYV---GAIPVDLK 155
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 95.1 bits (235), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 56/162 (34%), Positives = 86/162 (53%), Gaps = 6/162 (3%)
Query: 281 LPLPKLIAIALDIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIACEEVYCDAL 340
L L LI + +A+GME++ S+ IHRDL N+L+ ++ +KI DFG+A ++Y D
Sbjct: 197 LTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLA-RDIYKDPD 255
Query: 341 SDDPGTYR----WMAPEMIKHKSYGRKVDVYSFGLILWEMVA-GTIPYEEMNPIQAAFAV 395
G R WMAPE I + Y + DV+SFG++LWE+ + G PY + +
Sbjct: 256 YVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRR 315
Query: 396 VNKNLRPAIPGDCPPAMAALIEQCWSLQPDKRPEFWHIVKVL 437
+ + R P P M + CW +P +RP F +V+ L
Sbjct: 316 LKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHL 357
Score = 30.4 bits (67), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 41/87 (47%), Gaps = 16/87 (18%)
Query: 234 ALLSRL-------HNPNVIKFVAACKKP--PVYCVITEYLSEGSLRAYLHKLEHKTLPLP 284
AL+S L H+ NV+ + AC KP P+ VI E+ G+L YL ++ +P
Sbjct: 78 ALMSELKILIHIGHHLNVVNLLGACTKPGGPLM-VIVEFCKFGNLSTYLRSKRNEFVPYK 136
Query: 285 KLIAIALDIARGMEYIHSQGVIHRDLK 311
A +G +Y+ G I DLK
Sbjct: 137 TKGA---RFRQGKDYV---GAIPVDLK 157
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 95.1 bits (235), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 66/224 (29%), Positives = 115/224 (51%), Gaps = 10/224 (4%)
Query: 205 VAVKIIRIPDDDENETLAARLEKQFNREVALLSRLHNPNVIKFVAACKKPPVYCVITEYL 264
VAVKI+ + + + + + RE+ L +P++IK P + ++ EY+
Sbjct: 39 VAVKIL-----NRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYV 93
Query: 265 SEGSLRAYLHKLEHKTLPLPKLIAIALDIARGMEYIHSQGVIHRDLKPENVLIDQEFHLK 324
S G L Y+ K H + + + I ++Y H V+HRDLKPENVL+D + K
Sbjct: 94 SGGELFDYICK--HGRVEEMEARRLFQQILSAVDYCHRHMVVHRDLKPENVLLDAHMNAK 151
Query: 325 IADFGIACEEVYCDALSDDPGTYRWMAPEMIKHKSY-GRKVDVYSFGLILWEMVAGTIPY 383
IADFG++ + L G+ + APE+I + Y G +VD++S G+IL+ ++ GT+P+
Sbjct: 152 IADFGLSNMMSDGEFLRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPF 211
Query: 384 EEMNPIQAAFAVVNKNLRPAIPGDCPPAMAALIEQCWSLQPDKR 427
++ + + F + + IP ++A L+ + P KR
Sbjct: 212 DDEH-VPTLFKKIRGGVF-YIPEYLNRSVATLLMHMLQVDPLKR 253
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 95.1 bits (235), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 82/299 (27%), Positives = 135/299 (45%), Gaps = 59/299 (19%)
Query: 187 FAHGAHSRLYHGIYKDEPVAVKIIRIPDDDENETLAARLEKQFNREVALLSR--LHNPNV 244
G ++ G ++ E VAVKI ++R E+ + RE + L + N+
Sbjct: 14 IGKGRFGEVWRGKWRGEEVAVKI-----------FSSREERSWFREAEIYQTVMLRHENI 62
Query: 245 IKFVAACKKP----PVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIALDIARGMEYI 300
+ F+AA K ++++Y GSL YL++ T+ + +I +AL A G+ ++
Sbjct: 63 LGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRY---TVTVEGMIKLALSTASGLAHL 119
Query: 301 H-----SQG---VIHRDLKPENVLIDQEFHLKIADFGIACE-EVYCDALSDDP----GTY 347
H +QG + HRDLK +N+L+ + IAD G+A + D + P GT
Sbjct: 120 HMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTK 179
Query: 348 RWMAPEMI------KHKSYGRKVDVYSFGLILWEM-----VAGT-----IPYEEMNPIQA 391
R+MAPE++ KH ++ D+Y+ GL+ WE+ + G +PY ++ P
Sbjct: 180 RYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDP 239
Query: 392 AF-----AVVNKNLRPAIPG---DCPP--AMAALIEQCWSLQPDKRPEFWHIVKVLEQF 440
+ V + LRP IP C MA ++ +CW R I K L Q
Sbjct: 240 SVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQL 298
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 95.1 bits (235), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 82/299 (27%), Positives = 135/299 (45%), Gaps = 59/299 (19%)
Query: 187 FAHGAHSRLYHGIYKDEPVAVKIIRIPDDDENETLAARLEKQFNREVALLSR--LHNPNV 244
G ++ G ++ E VAVKI ++R E+ + RE + L + N+
Sbjct: 11 IGKGRFGEVWRGKWRGEEVAVKI-----------FSSREERSWFREAEIYQTVMLRHENI 59
Query: 245 IKFVAACKKP----PVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIALDIARGMEYI 300
+ F+AA K ++++Y GSL YL++ T+ + +I +AL A G+ ++
Sbjct: 60 LGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRY---TVTVEGMIKLALSTASGLAHL 116
Query: 301 H-----SQG---VIHRDLKPENVLIDQEFHLKIADFGIACE-EVYCDALSDDP----GTY 347
H +QG + HRDLK +N+L+ + IAD G+A + D + P GT
Sbjct: 117 HMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTK 176
Query: 348 RWMAPEMI------KHKSYGRKVDVYSFGLILWEM-----VAGT-----IPYEEMNPIQA 391
R+MAPE++ KH ++ D+Y+ GL+ WE+ + G +PY ++ P
Sbjct: 177 RYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDP 236
Query: 392 AF-----AVVNKNLRPAIPG---DCPP--AMAALIEQCWSLQPDKRPEFWHIVKVLEQF 440
+ V + LRP IP C MA ++ +CW R I K L Q
Sbjct: 237 SVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQL 295
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 95.1 bits (235), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 99/206 (48%), Gaps = 5/206 (2%)
Query: 223 ARLEKQFNREVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLP 282
A +E Q REV + S L +PN+++ +I EY G++ L KL
Sbjct: 52 AGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL--SKFD 109
Query: 283 LPKLIAIALDIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIACEEVYCDALSD 342
+ ++A + Y HS+ VIHRD+KPEN+L+ LKIADFG + D
Sbjct: 110 EQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSV-HAPSSRRDD 168
Query: 343 DPGTYRWMAPEMIKHKSYGRKVDVYSFGLILWEMVAGTIPYEEMNPIQAAFAVVNKNLRP 402
GT ++ PEMI+ + + KVD++S G++ +E + G P+ E N Q + +++ +
Sbjct: 169 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF-EANTYQETYKRISR-VEF 226
Query: 403 AIPGDCPPAMAALIEQCWSLQPDKRP 428
P LI + P +RP
Sbjct: 227 TFPDFVTEGARDLISRLLKHNPSQRP 252
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 95.1 bits (235), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 54/170 (31%), Positives = 99/170 (58%), Gaps = 5/170 (2%)
Query: 259 VITEYLSEGSLRAYLHKLEHKTLPLPKLIAIALDIARGMEYIHSQGVIHRDLKPENVLID 318
+ EYL+ G L ++ HK L + A +I G++++HS+G+++RDLK +N+L+D
Sbjct: 96 FVMEYLNGGDLMYHIQSC-HK-FDLSRATFYAAEIILGLQFLHSKGIVYRDLKLDNILLD 153
Query: 319 QEFHLKIADFGIACEEVYCDALSDD-PGTYRWMAPEMIKHKSYGRKVDVYSFGLILWEMV 377
++ H+KIADFG+ E + DA +++ GT ++APE++ + Y VD +SFG++L+EM+
Sbjct: 154 KDGHIKIADFGMCKENMLGDAKTNEFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEML 213
Query: 378 AGTIPYEEMNPIQAAFAVVNKNLRPAIPGDCPPAMAALIEQCWSLQPDKR 427
G P+ + + ++ N P P L+ + + +P+KR
Sbjct: 214 IGQSPFHGQDEEELFHSIRMDN--PFYPRWLEKEAKDLLVKLFVREPEKR 261
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 94.7 bits (234), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 106/209 (50%), Gaps = 17/209 (8%)
Query: 234 ALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIAL-- 291
+L S ++P K + K ++ + E+ +G+L ++ K + L K++A+ L
Sbjct: 87 SLESSDYDPENSKNSSRSKTKCLF-IQMEFCDKGTLEQWIEK--RRGEKLDKVLALELFE 143
Query: 292 DIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIACEEVYCDALSDDPGTYRWMA 351
I +G++YIHS+ +IHRDLKP N+ + +KI DFG+ + GT R+M+
Sbjct: 144 QITKGVDYIHSKKLIHRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDGKRTRSKGTLRYMS 203
Query: 352 PEMIKHKSYGRKVDVYSFGLILWEMVAGTIPYEEMNPIQAAFAVVN--KNLRPAIPGDC- 408
PE I + YG++VD+Y+ GLIL E+ ++ AF +LR I D
Sbjct: 204 PEQISSQDYGKEVDLYALGLILAEL---------LHVCDTAFETSKFFTDLRDGIISDIF 254
Query: 409 PPAMAALIEQCWSLQPDKRPEFWHIVKVL 437
L+++ S +P+ RP I++ L
Sbjct: 255 DKKEKTLLQKLLSKKPEDRPNTSEILRTL 283
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 69/258 (26%), Positives = 123/258 (47%), Gaps = 20/258 (7%)
Query: 187 FAHGAHSRLYHGIYKDE------PVAVKIIRIPDDDENETLAARLEKQFNREVALLSRLH 240
GA +Y GI+ + PVA+K++R E + + K+ E +++ +
Sbjct: 25 LGSGAFGTVYKGIWIPDGENVKIPVAIKVLR-------ENTSPKANKEILDEAYVMAGVG 77
Query: 241 NPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIALDIARGMEYI 300
+P V + + C V ++T+ + G L ++ + L L+ + IA+GM Y+
Sbjct: 78 SPYVSRLLGICLTSTVQ-LVTQLMPYGCLLDHVRE-NRGRLGSQDLLNWCMQIAKGMSYL 135
Query: 301 HSQGVIHRDLKPENVLIDQEFHLKIADFGIA-CEEVYCDALSDDPGTY--RWMAPEMIKH 357
++HRDL NVL+ H+KI DFG+A ++ D G +WMA E I
Sbjct: 136 EDVRLVHRDLAARNVLVKSPNHVKITDFGLARLLDIDETEYHADGGKVPIKWMALESILR 195
Query: 358 KSYGRKVDVYSFGLILWE-MVAGTIPYEEMNPIQAAFAVVNKNLRPAIPGDCPPAMAALI 416
+ + + DV+S+G+ +WE M G PY+ + P + ++ K R P C + ++
Sbjct: 196 RRFTHQSDVWSYGVTVWELMTFGAKPYDGI-PAREIPDLLEKGERLPQPPICTIDVYMIM 254
Query: 417 EQCWSLQPDKRPEFWHIV 434
+CW + + RP F +V
Sbjct: 255 VKCWMIDSECRPRFRELV 272
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 74/295 (25%), Positives = 131/295 (44%), Gaps = 31/295 (10%)
Query: 164 RVNAVDAADEHTVDLSQLFLGLRFAHGAHSRLYHGIYKDEPVAVKIIRIPDDDENETLAA 223
RV VD +E T + FL HG ++Y G+ +D R P+ +
Sbjct: 28 RVPLVDL-EEATNNFDHKFL---IGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFE 83
Query: 224 RLEKQFNREVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPL 283
+ LS +P+++ + C + +I +Y+ G+L+ +L+ + T+ +
Sbjct: 84 TEIET-------LSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSM 136
Query: 284 P--KLIAIALDIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIA---CEEVYCD 338
+ + I + ARG+ Y+H++ +IHRD+K N+L+D+ F KI DFGI+ E
Sbjct: 137 SWEQRLEICIGAARGLHYLHTRAIIHRDVKSINILLDENFVPKITDFGISKKGTELGQTH 196
Query: 339 ALSDDPGTYRWMAPEMIKHKSYGRKVDVYSFGLILWEM------VAGTIPYEEMNPIQAA 392
GT ++ PE K DVYSFG++L+E+ + ++P E +N + A
Sbjct: 197 LXXVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWA 256
Query: 393 F---------AVVNKNLRPAIPGDCPPAMAALIEQCWSLQPDKRPEFWHIVKVLE 438
+V+ NL I + +C +L + RP ++ LE
Sbjct: 257 VESHNNGQLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLE 311
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 100/206 (48%), Gaps = 5/206 (2%)
Query: 223 ARLEKQFNREVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLP 282
A +E Q REV + S L +PN+++ +I EY G++ L KL
Sbjct: 49 AGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL--SKFD 106
Query: 283 LPKLIAIALDIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIACEEVYCDALSD 342
+ ++A + Y HS+ VIHRD+KPEN+L+ LKIADFG + ++
Sbjct: 107 EQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSV-HAPSSRRTE 165
Query: 343 DPGTYRWMAPEMIKHKSYGRKVDVYSFGLILWEMVAGTIPYEEMNPIQAAFAVVNKNLRP 402
GT ++ PEMI+ + + KVD++S G++ +E + G P+ E N Q + +++ +
Sbjct: 166 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF-EANTYQETYKRISR-VEF 223
Query: 403 AIPGDCPPAMAALIEQCWSLQPDKRP 428
P LI + P +RP
Sbjct: 224 TFPDFVTEGARDLISRLLKHNPSQRP 249
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 98/206 (47%), Gaps = 5/206 (2%)
Query: 223 ARLEKQFNREVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLP 282
A +E Q REV + S L +PN+++ +I EY G + L KL
Sbjct: 54 AGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKL--SKFD 111
Query: 283 LPKLIAIALDIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIACEEVYCDALSD 342
+ ++A + Y HS+ VIHRD+KPEN+L+ LKIADFG + +
Sbjct: 112 EQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSV-HAPSSRRTT 170
Query: 343 DPGTYRWMAPEMIKHKSYGRKVDVYSFGLILWEMVAGTIPYEEMNPIQAAFAVVNKNLRP 402
GT ++ PEMI+ + + KVD++S G++ +E + G P+ E N Q + +++ +
Sbjct: 171 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF-EANTYQETYKRISR-VEF 228
Query: 403 AIPGDCPPAMAALIEQCWSLQPDKRP 428
P LI + P +RP
Sbjct: 229 TFPDFVTEGARDLISRLLKHNPSQRP 254
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 54/170 (31%), Positives = 98/170 (57%), Gaps = 5/170 (2%)
Query: 259 VITEYLSEGSLRAYLHKLEHKTLPLPKLIAIALDIARGMEYIHSQGVIHRDLKPENVLID 318
+ EYL+ G L ++ HK L + A +I G++++HS+G+++RDLK +N+L+D
Sbjct: 95 FVMEYLNGGDLMYHIQSC-HK-FDLSRATFYAAEIILGLQFLHSKGIVYRDLKLDNILLD 152
Query: 319 QEFHLKIADFGIACEEVYCDALSDD-PGTYRWMAPEMIKHKSYGRKVDVYSFGLILWEMV 377
++ H+KIADFG+ E + DA ++ GT ++APE++ + Y VD +SFG++L+EM+
Sbjct: 153 KDGHIKIADFGMCKENMLGDAKTNXFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEML 212
Query: 378 AGTIPYEEMNPIQAAFAVVNKNLRPAIPGDCPPAMAALIEQCWSLQPDKR 427
G P+ + + ++ N P P L+ + + +P+KR
Sbjct: 213 IGQSPFHGQDEEELFHSIRMDN--PFYPRWLEKEAKDLLVKLFVREPEKR 260
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 97/206 (47%), Gaps = 5/206 (2%)
Query: 223 ARLEKQFNREVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLP 282
A +E Q REV + S L +PN+++ +I EY G + L KL
Sbjct: 54 AGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKL--SKFD 111
Query: 283 LPKLIAIALDIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIACEEVYCDALSD 342
+ ++A + Y HS+ VIHRD+KPEN+L+ LKIADFG +
Sbjct: 112 EQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSV-HAPSSRRXX 170
Query: 343 DPGTYRWMAPEMIKHKSYGRKVDVYSFGLILWEMVAGTIPYEEMNPIQAAFAVVNKNLRP 402
GT ++ PEMI+ + + KVD++S G++ +E + G P+ E N Q + +++ +
Sbjct: 171 LXGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF-EANTYQETYKRISR-VEF 228
Query: 403 AIPGDCPPAMAALIEQCWSLQPDKRP 428
P LI + P +RP
Sbjct: 229 TFPDFVTEGARDLISRLLKHNPSQRP 254
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 99/206 (48%), Gaps = 5/206 (2%)
Query: 223 ARLEKQFNREVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLP 282
A +E Q REV + S L +PN+++ +I EY G++ L KL
Sbjct: 66 AGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL--SKFD 123
Query: 283 LPKLIAIALDIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIACEEVYCDALSD 342
+ ++A + Y HS+ VIHRD+KPEN+L+ LKIADFG + +
Sbjct: 124 EQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSV-HAPSSRRTT 182
Query: 343 DPGTYRWMAPEMIKHKSYGRKVDVYSFGLILWEMVAGTIPYEEMNPIQAAFAVVNKNLRP 402
GT ++ PEMI+ + + KVD++S G++ +E + G P+ E N Q + +++ +
Sbjct: 183 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF-EANTYQETYKRISR-VEF 240
Query: 403 AIPGDCPPAMAALIEQCWSLQPDKRP 428
P LI + P +RP
Sbjct: 241 TFPDFVTEGARDLISRLLKHNPSQRP 266
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 59/180 (32%), Positives = 96/180 (53%), Gaps = 15/180 (8%)
Query: 205 VAVKIIRIPDDDENETLAARLEKQFNREVALLSRLH---NPNVIKFVAACKKPPV----- 256
VA+K +R+P+ +E ++ REVALL RL +PNV++ + C
Sbjct: 32 VALKSVRVPNGEEGLPIST------VREVALLRRLEAFEHPNVVRLMDVCATSRTDREIK 85
Query: 257 YCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIALDIARGMEYIHSQGVIHRDLKPENVL 316
++ E++ + LR YL K LP + + RG++++H+ ++HRDLKPEN+L
Sbjct: 86 VTLVFEHVDQ-DLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENIL 144
Query: 317 IDQEFHLKIADFGIACEEVYCDALSDDPGTYRWMAPEMIKHKSYGRKVDVYSFGLILWEM 376
+ +K+ADFG+A Y AL+ T + APE++ +Y VD++S G I EM
Sbjct: 145 VTSGGTVKLADFGLARIYSYQMALAPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEM 204
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 111/216 (51%), Gaps = 10/216 (4%)
Query: 224 RLEKQFNREVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPL 283
R E FN EV ++ + NV++ + V+ E+L G+L + H +
Sbjct: 191 RRELLFN-EVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIV---THTRMNE 246
Query: 284 PKLIAIALDIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIACEEVYCDALSDD 343
++ A+ L + + + +H+QGVIHRD+K +++L+ + +K++DFG C +V +
Sbjct: 247 EQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGF-CAQVSKEVPRRK 305
Query: 344 P--GTYRWMAPEMIKHKSYGRKVDVYSFGLILWEMVAGTIPYEEMNPIQAAFAVVNKNLR 401
GT WMAPE+I YG +VD++S G+++ EMV G PY P++ A ++ NL
Sbjct: 306 XLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLK-AMKMIRDNLP 364
Query: 402 PAIPG--DCPPAMAALIEQCWSLQPDKRPEFWHIVK 435
P + P++ +++ P +R ++K
Sbjct: 365 PRLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLK 400
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 99/206 (48%), Gaps = 5/206 (2%)
Query: 223 ARLEKQFNREVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLP 282
A +E Q REV + S L +PN+++ +I EY G++ L KL
Sbjct: 54 AGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL--SKFD 111
Query: 283 LPKLIAIALDIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIACEEVYCDALSD 342
+ ++A + Y HS+ VIHRD+KPEN+L+ LKIADFG + +
Sbjct: 112 EQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSV-HAPSSRRTT 170
Query: 343 DPGTYRWMAPEMIKHKSYGRKVDVYSFGLILWEMVAGTIPYEEMNPIQAAFAVVNKNLRP 402
GT ++ PEMI+ + + KVD++S G++ +E + G P+ E N Q + +++ +
Sbjct: 171 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF-EANTYQETYKRISR-VEF 228
Query: 403 AIPGDCPPAMAALIEQCWSLQPDKRP 428
P LI + P +RP
Sbjct: 229 TFPDFVTEGARDLISRLLKHNPSQRP 254
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 99/206 (48%), Gaps = 5/206 (2%)
Query: 223 ARLEKQFNREVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLP 282
A +E Q REV + S L +PN+++ +I EY G++ L KL
Sbjct: 52 AGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL--SKFD 109
Query: 283 LPKLIAIALDIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIACEEVYCDALSD 342
+ ++A + Y HS+ VIHRD+KPEN+L+ LKIADFG + +
Sbjct: 110 EQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSV-HAPSSRRTT 168
Query: 343 DPGTYRWMAPEMIKHKSYGRKVDVYSFGLILWEMVAGTIPYEEMNPIQAAFAVVNKNLRP 402
GT ++ PEMI+ + + KVD++S G++ +E + G P+ E N Q + +++ +
Sbjct: 169 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF-EANTYQETYKRISR-VEF 226
Query: 403 AIPGDCPPAMAALIEQCWSLQPDKRP 428
P LI + P +RP
Sbjct: 227 TFPDFVTEGARDLISRLLKHNPSQRP 252
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 86/298 (28%), Positives = 140/298 (46%), Gaps = 61/298 (20%)
Query: 190 GAHSRLYHGIYKDEPVAVKIIRIPDDDENETLAARLEKQFNREVALLSR--LHNPNVIKF 247
G + ++ G ++ E VAVKI ++R EK + RE L + L + N++ F
Sbjct: 48 GRYGEVWRGSWQGENVAVKI-----------FSSRDEKSWFRETELYNTVMLRHENILGF 96
Query: 248 VAACK----KPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIALDIARGMEYIH-- 301
+A+ +IT Y GSL YL + TL + I L IA G+ ++H
Sbjct: 97 IASDMTSRHSSTQLWLITHYHEMGSLYDYL---QLTTLDTVSCLRIVLSIASGLAHLHIE 153
Query: 302 ---SQG---VIHRDLKPENVLIDQEFHLKIADFGIAC---EEVYCDALSDDP--GTYRWM 350
+QG + HRDLK +N+L+ + IAD G+A + + ++P GT R+M
Sbjct: 154 IFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYM 213
Query: 351 APEMIKHK-------SYGRKVDVYSFGLILWE----MVAGTI------PYEEMNPIQAAF 393
APE++ SY ++VD+++FGL+LWE MV+ I P+ ++ P +F
Sbjct: 214 APEVLDETIQVDCFDSY-KRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVVPNDPSF 272
Query: 394 AVVNKNL-----RPAIPGD-----CPPAMAALIEQCWSLQPDKRPEFWHIVKVLEQFE 441
+ K + RP IP ++A L+++CW P R I K L + +
Sbjct: 273 EDMRKVVCVDQQRPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKKTLTKID 330
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 112/221 (50%), Gaps = 20/221 (9%)
Query: 224 RLEKQFNREVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPL 283
R E FN EV ++ + NV++ + V+ E+L G+L + H +
Sbjct: 71 RRELLFN-EVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIV---THTRMNE 126
Query: 284 PKLIAIALDIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIACEEVYCDALSDD 343
++ A+ L + + + +H+QGVIHRD+K +++L+ + +K++DFG +C +S +
Sbjct: 127 EQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFG------FCAQVSKE 180
Query: 344 P-------GTYRWMAPEMIKHKSYGRKVDVYSFGLILWEMVAGTIPYEEMNPIQAAFAVV 396
GT WMAPE+I YG +VD++S G+++ EMV G PY P++ A ++
Sbjct: 181 VPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLK-AMKMI 239
Query: 397 NKNLRPAIPG--DCPPAMAALIEQCWSLQPDKRPEFWHIVK 435
NL P + P++ +++ P +R ++K
Sbjct: 240 RDNLPPRLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLK 280
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 102/213 (47%), Gaps = 5/213 (2%)
Query: 223 ARLEKQFNREVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLP 282
A +E Q REV + S L +PN+++ +I EY G++ L KL
Sbjct: 75 AGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL--SKFD 132
Query: 283 LPKLIAIALDIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIACEEVYCDALSD 342
+ ++A + Y HS+ VIHRD+KPEN+L+ LKIADFG + +
Sbjct: 133 EQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSV-HAPSSRRTT 191
Query: 343 DPGTYRWMAPEMIKHKSYGRKVDVYSFGLILWEMVAGTIPYEEMNPIQAAFAVVNKNLRP 402
GT ++ PEMI+ + + KVD++S G++ +E + G P+ E N Q + +++ +
Sbjct: 192 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF-EANTYQETYKRISR-VEF 249
Query: 403 AIPGDCPPAMAALIEQCWSLQPDKRPEFWHIVK 435
P LI + P +RP +++
Sbjct: 250 TFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 282
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 99/206 (48%), Gaps = 5/206 (2%)
Query: 223 ARLEKQFNREVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLP 282
A +E Q REV + S L +PN+++ +I EY G++ L KL
Sbjct: 49 AGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL--SKFD 106
Query: 283 LPKLIAIALDIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIACEEVYCDALSD 342
+ ++A + Y HS+ VIHRD+KPEN+L+ LKIADFG + +
Sbjct: 107 EQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSV-HAPSSRRTT 165
Query: 343 DPGTYRWMAPEMIKHKSYGRKVDVYSFGLILWEMVAGTIPYEEMNPIQAAFAVVNKNLRP 402
GT ++ PEMI+ + + KVD++S G++ +E + G P+ E N Q + +++ +
Sbjct: 166 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF-EANTYQETYKRISR-VEF 223
Query: 403 AIPGDCPPAMAALIEQCWSLQPDKRP 428
P LI + P +RP
Sbjct: 224 TFPDFVTEGARDLISRLLKHNPSQRP 249
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 112/221 (50%), Gaps = 20/221 (9%)
Query: 224 RLEKQFNREVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPL 283
R E FN EV ++ + NV++ + V+ E+L G+L + H +
Sbjct: 60 RRELLFN-EVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIV---THTRMNE 115
Query: 284 PKLIAIALDIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIACEEVYCDALSDD 343
++ A+ L + + + +H+QGVIHRD+K +++L+ + +K++DFG +C +S +
Sbjct: 116 EQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFG------FCAQVSKE 169
Query: 344 P-------GTYRWMAPEMIKHKSYGRKVDVYSFGLILWEMVAGTIPYEEMNPIQAAFAVV 396
GT WMAPE+I YG +VD++S G+++ EMV G PY P++ A ++
Sbjct: 170 VPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLK-AMKMI 228
Query: 397 NKNLRPAIPG--DCPPAMAALIEQCWSLQPDKRPEFWHIVK 435
NL P + P++ +++ P +R ++K
Sbjct: 229 RDNLPPRLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLK 269
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 99/206 (48%), Gaps = 5/206 (2%)
Query: 223 ARLEKQFNREVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLP 282
A +E Q REV + S L +PN+++ +I EY G++ L KL
Sbjct: 53 AGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL--SKFD 110
Query: 283 LPKLIAIALDIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIACEEVYCDALSD 342
+ ++A + Y HS+ VIHRD+KPEN+L+ LKIADFG + +
Sbjct: 111 EQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSV-HAPSSRRTT 169
Query: 343 DPGTYRWMAPEMIKHKSYGRKVDVYSFGLILWEMVAGTIPYEEMNPIQAAFAVVNKNLRP 402
GT ++ PEMI+ + + KVD++S G++ +E + G P+ E N Q + +++ +
Sbjct: 170 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF-EANTYQETYKRISR-VEF 227
Query: 403 AIPGDCPPAMAALIEQCWSLQPDKRP 428
P LI + P +RP
Sbjct: 228 TFPDFVTEGARDLISRLLKHNPSQRP 253
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 112/221 (50%), Gaps = 20/221 (9%)
Query: 224 RLEKQFNREVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPL 283
R E FN EV ++ + NV++ + V+ E+L G+L + H +
Sbjct: 64 RRELLFN-EVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIV---THTRMNE 119
Query: 284 PKLIAIALDIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIACEEVYCDALSDD 343
++ A+ L + + + +H+QGVIHRD+K +++L+ + +K++DFG +C +S +
Sbjct: 120 EQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFG------FCAQVSKE 173
Query: 344 P-------GTYRWMAPEMIKHKSYGRKVDVYSFGLILWEMVAGTIPYEEMNPIQAAFAVV 396
GT WMAPE+I YG +VD++S G+++ EMV G PY P++ A ++
Sbjct: 174 VPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLK-AMKMI 232
Query: 397 NKNLRPAIPG--DCPPAMAALIEQCWSLQPDKRPEFWHIVK 435
NL P + P++ +++ P +R ++K
Sbjct: 233 RDNLPPRLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLK 273
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 56/175 (32%), Positives = 94/175 (53%), Gaps = 14/175 (8%)
Query: 232 EVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIAL 291
E +L ++ P ++K + K ++ EY+ G + ++L ++ + P + A
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHARFYAA-- 148
Query: 292 DIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIACEE-----VYCDALSDDPGT 346
I EY+HS +I+RDLKPEN+LIDQ+ ++K+ADFG A C GT
Sbjct: 149 QIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWXLC-------GT 201
Query: 347 YRWMAPEMIKHKSYGRKVDVYSFGLILWEMVAGTIPYEEMNPIQAAFAVVNKNLR 401
++APE+I K Y + VD ++ G++++EM AG P+ PIQ +V+ +R
Sbjct: 202 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR 256
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 64/234 (27%), Positives = 112/234 (47%), Gaps = 32/234 (13%)
Query: 231 REVALLSRLHNPNVIKFV----------------AACKKPPVYCVITEYLSEGSLRAYLH 274
REV L++L + N++ + ++ K + E+ +G+L ++
Sbjct: 53 REVKALAKLDHVNIVHYNGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIE 112
Query: 275 KLEHKTLPLPKLIAIAL--DIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIAC 332
K + L K++A+ L I +G++YIHS+ +I+RDLKP N+ + +KI DFG+
Sbjct: 113 K--RRGEKLDKVLALELFEQITKGVDYIHSKKLINRDLKPSNIFLVDTKQVKIGDFGLVT 170
Query: 333 EEVYCDALSDDPGTYRWMAPEMIKHKSYGRKVDVYSFGLILWEMVAGTIPYEEMNPIQAA 392
GT R+M+PE I + YG++VD+Y+ GLIL E+ ++ A
Sbjct: 171 SLKNDGKRXRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAEL---------LHVCDTA 221
Query: 393 FAVVN--KNLRPAIPGDC-PPAMAALIEQCWSLQPDKRPEFWHIVKVLEQFETS 443
F +LR I D L+++ S +P+ RP I++ L ++ S
Sbjct: 222 FETSKFFTDLRDGIISDIFDKKEKTLLQKLLSKKPEDRPNTSEILRTLTVWKKS 275
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 99/206 (48%), Gaps = 5/206 (2%)
Query: 223 ARLEKQFNREVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLP 282
A +E Q REV + S L +PN+++ +I EY G++ L KL
Sbjct: 48 AGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL--SKFD 105
Query: 283 LPKLIAIALDIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIACEEVYCDALSD 342
+ ++A + Y HS+ VIHRD+KPEN+L+ LKIADFG + +
Sbjct: 106 EQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSV-HAPSSRRTT 164
Query: 343 DPGTYRWMAPEMIKHKSYGRKVDVYSFGLILWEMVAGTIPYEEMNPIQAAFAVVNKNLRP 402
GT ++ PEMI+ + + KVD++S G++ +E + G P+ E N Q + +++ +
Sbjct: 165 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF-EANTYQETYKRISR-VEF 222
Query: 403 AIPGDCPPAMAALIEQCWSLQPDKRP 428
P LI + P +RP
Sbjct: 223 TFPDFVTEGARDLISRLLKHNPSQRP 248
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 99/206 (48%), Gaps = 5/206 (2%)
Query: 223 ARLEKQFNREVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLP 282
A +E Q REV + S L +PN+++ +I EY G++ L KL
Sbjct: 52 AGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL--SKFD 109
Query: 283 LPKLIAIALDIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIACEEVYCDALSD 342
+ ++A + Y HS+ VIHRD+KPEN+L+ LKIADFG + +
Sbjct: 110 EQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSV-HAPSSRRTT 168
Query: 343 DPGTYRWMAPEMIKHKSYGRKVDVYSFGLILWEMVAGTIPYEEMNPIQAAFAVVNKNLRP 402
GT ++ PEMI+ + + KVD++S G++ +E + G P+ E N Q + +++ +
Sbjct: 169 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF-EANTYQETYKRISR-VEF 226
Query: 403 AIPGDCPPAMAALIEQCWSLQPDKRP 428
P LI + P +RP
Sbjct: 227 TFPDFVTEGARDLISRLLKHNPSQRP 252
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 112/221 (50%), Gaps = 20/221 (9%)
Query: 224 RLEKQFNREVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPL 283
R E FN EV ++ + NV++ + V+ E+L G+L + H +
Sbjct: 69 RRELLFN-EVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIV---THTRMNE 124
Query: 284 PKLIAIALDIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIACEEVYCDALSDD 343
++ A+ L + + + +H+QGVIHRD+K +++L+ + +K++DFG +C +S +
Sbjct: 125 EQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFG------FCAQVSKE 178
Query: 344 P-------GTYRWMAPEMIKHKSYGRKVDVYSFGLILWEMVAGTIPYEEMNPIQAAFAVV 396
GT WMAPE+I YG +VD++S G+++ EMV G PY P++ A ++
Sbjct: 179 VPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLK-AMKMI 237
Query: 397 NKNLRPAIPG--DCPPAMAALIEQCWSLQPDKRPEFWHIVK 435
NL P + P++ +++ P +R ++K
Sbjct: 238 RDNLPPRLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLK 278
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 109/206 (52%), Gaps = 17/206 (8%)
Query: 187 FAHGAHSRLYHGIYK--DEPVAVKIIRIPDDDENETLAARLEKQFNREVALLSRLHNPNV 244
GA+ + + + +E VAVKI+ + A + +E+ + L++ NV
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDM-------KRAVDCPENIKKEICINKMLNHENV 67
Query: 245 IKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKT-LPLPKLIAIALDIARGMEYIHSQ 303
+KF ++ + + EY S G L ++E +P P + G+ Y+H
Sbjct: 68 VKFYGHRREGNIQYLFLEYCSGGEL---FDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 124
Query: 304 GVIHRDLKPENVLIDQEFHLKIADFGIACEEVYCD---ALSDDPGTYRWMAPEMIKHKSY 360
G+ HRD+KPEN+L+D+ +LKI+DFG+A Y + L+ GT ++APE++K + +
Sbjct: 125 GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 184
Query: 361 -GRKVDVYSFGLILWEMVAGTIPYEE 385
VDV+S G++L M+AG +P+++
Sbjct: 185 HAEPVDVWSCGIVLTAMLAGELPWDQ 210
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 59/180 (32%), Positives = 95/180 (52%), Gaps = 15/180 (8%)
Query: 205 VAVKIIRIPDDDENETLAARLEKQFNREVALLSRLH---NPNVIKFVAACKKPPV----- 256
VA+K +R+P+ +E ++ REVALL RL +PNV++ + C
Sbjct: 32 VALKSVRVPNGEEGLPIST------VREVALLRRLEAFEHPNVVRLMDVCATSRTDREIK 85
Query: 257 YCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIALDIARGMEYIHSQGVIHRDLKPENVL 316
++ E++ + LR YL K LP + + RG++++H+ ++HRDLKPEN+L
Sbjct: 86 VTLVFEHVDQ-DLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENIL 144
Query: 317 IDQEFHLKIADFGIACEEVYCDALSDDPGTYRWMAPEMIKHKSYGRKVDVYSFGLILWEM 376
+ +K+ADFG+A Y AL T + APE++ +Y VD++S G I EM
Sbjct: 145 VTSGGTVKLADFGLARIYSYQMALDPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEM 204
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 63/198 (31%), Positives = 103/198 (52%), Gaps = 6/198 (3%)
Query: 231 REVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIA 290
RE++ L L +P++IK P ++ EY + G L Y+ +E K + +
Sbjct: 58 REISYLKLLRHPHIIKLYDVITTPTDIVMVIEY-AGGELFDYI--VEKKRMTEDEGRRFF 114
Query: 291 LDIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIACEEVYCDALSDDPGTYRWM 350
I +EY H ++HRDLKPEN+L+D ++KIADFG++ + L G+ +
Sbjct: 115 QQIICAIEYCHRHKIVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGNFLKTSCGSPNYA 174
Query: 351 APEMIKHKSY-GRKVDVYSFGLILWEMVAGTIPYEEMNPIQAAFAVVNKNLRPAIPGDCP 409
APE+I K Y G +VDV+S G++L+ M+ G +P+++ I F VN + +P
Sbjct: 175 APEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDD-EFIPNLFKKVNSCVY-VMPDFLS 232
Query: 410 PAMAALIEQCWSLQPDKR 427
P +LI + P +R
Sbjct: 233 PGAQSLIRRMIVADPMQR 250
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 111/216 (51%), Gaps = 10/216 (4%)
Query: 224 RLEKQFNREVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPL 283
R E FN EV ++ + NV++ + V+ E+L G+L + H +
Sbjct: 114 RRELLFN-EVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIV---THTRMNE 169
Query: 284 PKLIAIALDIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIACEEVYCDALSDD 343
++ A+ L + + + +H+QGVIHRD+K +++L+ + +K++DFG C +V +
Sbjct: 170 EQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGF-CAQVSKEVPRRK 228
Query: 344 P--GTYRWMAPEMIKHKSYGRKVDVYSFGLILWEMVAGTIPYEEMNPIQAAFAVVNKNLR 401
GT WMAPE+I YG +VD++S G+++ EMV G PY P++ A ++ NL
Sbjct: 229 XLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLK-AMKMIRDNLP 287
Query: 402 PAIPG--DCPPAMAALIEQCWSLQPDKRPEFWHIVK 435
P + P++ +++ P +R ++K
Sbjct: 288 PRLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLK 323
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 99/206 (48%), Gaps = 5/206 (2%)
Query: 223 ARLEKQFNREVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLP 282
A +E Q REV + S L +PN+++ +I EY G++ L KL
Sbjct: 49 AGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL--SKFD 106
Query: 283 LPKLIAIALDIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIACEEVYCDALSD 342
+ ++A + Y HS+ VIHRD+KPEN+L+ LKIADFG + +
Sbjct: 107 EQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSV-HAPSSRRTX 165
Query: 343 DPGTYRWMAPEMIKHKSYGRKVDVYSFGLILWEMVAGTIPYEEMNPIQAAFAVVNKNLRP 402
GT ++ PEMI+ + + KVD++S G++ +E + G P+ E N Q + +++ +
Sbjct: 166 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF-EANTYQETYKRISR-VEF 223
Query: 403 AIPGDCPPAMAALIEQCWSLQPDKRP 428
P LI + P +RP
Sbjct: 224 TFPDFVTEGARDLISRLLKHNPSQRP 249
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 109/206 (52%), Gaps = 17/206 (8%)
Query: 187 FAHGAHSRLYHGIYK--DEPVAVKIIRIPDDDENETLAARLEKQFNREVALLSRLHNPNV 244
GA+ + + + +E VAVKI+ + A + +E+ + L++ NV
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDM-------KRAVDCPENIKKEICINKMLNHENV 66
Query: 245 IKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKT-LPLPKLIAIALDIARGMEYIHSQ 303
+KF ++ + + EY S G L ++E +P P + G+ Y+H
Sbjct: 67 VKFYGHRREGNIQYLFLEYCSGGEL---FDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 123
Query: 304 GVIHRDLKPENVLIDQEFHLKIADFGIACEEVYCD---ALSDDPGTYRWMAPEMIKHKSY 360
G+ HRD+KPEN+L+D+ +LKI+DFG+A Y + L+ GT ++APE++K + +
Sbjct: 124 GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 183
Query: 361 -GRKVDVYSFGLILWEMVAGTIPYEE 385
VDV+S G++L M+AG +P+++
Sbjct: 184 HAEPVDVWSCGIVLTAMLAGELPWDQ 209
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 56/175 (32%), Positives = 94/175 (53%), Gaps = 14/175 (8%)
Query: 232 EVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIAL 291
E +L ++ P ++K + K ++ EY+ G + ++L ++ + P + A
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHARFYAA-- 148
Query: 292 DIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIACEE-----VYCDALSDDPGT 346
I EY+HS +I+RDLKPEN+LIDQ+ ++K+ADFG A C GT
Sbjct: 149 QIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWXLC-------GT 201
Query: 347 YRWMAPEMIKHKSYGRKVDVYSFGLILWEMVAGTIPYEEMNPIQAAFAVVNKNLR 401
++APE+I K Y + VD ++ G++++EM AG P+ PIQ +V+ +R
Sbjct: 202 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR 256
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 99/206 (48%), Gaps = 5/206 (2%)
Query: 223 ARLEKQFNREVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLP 282
A +E Q REV + S L +PN+++ +I EY G++ L KL
Sbjct: 46 AGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL--SKFD 103
Query: 283 LPKLIAIALDIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIACEEVYCDALSD 342
+ ++A + Y HS+ VIHRD+KPEN+L+ LKIADFG + +
Sbjct: 104 EQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAP-SSRRTT 162
Query: 343 DPGTYRWMAPEMIKHKSYGRKVDVYSFGLILWEMVAGTIPYEEMNPIQAAFAVVNKNLRP 402
GT ++ PEMI+ + + KVD++S G++ +E + G P+ E N Q + +++ +
Sbjct: 163 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF-EANTYQETYKRISR-VEF 220
Query: 403 AIPGDCPPAMAALIEQCWSLQPDKRP 428
P LI + P +RP
Sbjct: 221 TFPDFVTEGARDLISRLLKHNPSQRP 246
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 54/170 (31%), Positives = 95/170 (55%), Gaps = 4/170 (2%)
Query: 232 EVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIAL 291
E +L ++ P ++K + K ++ EY++ G + ++L ++ + P + A
Sbjct: 112 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAA-- 169
Query: 292 DIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIACEEVYCDALSDDPGTYRWMA 351
I EY+HS +I+RDLKPEN+LIDQ+ ++++ DFG A + A GT ++A
Sbjct: 170 QIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFA--KRVKGATWTLCGTPEYLA 227
Query: 352 PEMIKHKSYGRKVDVYSFGLILWEMVAGTIPYEEMNPIQAAFAVVNKNLR 401
PE+I K Y + VD ++ G++++EM AG P+ PIQ +V+ +R
Sbjct: 228 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR 277
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 99/206 (48%), Gaps = 5/206 (2%)
Query: 223 ARLEKQFNREVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLP 282
A +E Q REV + S L +PN+++ +I EY G++ L KL
Sbjct: 52 AGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL--SKFD 109
Query: 283 LPKLIAIALDIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIACEEVYCDALSD 342
+ ++A + Y HS+ VIHRD+KPEN+L+ LKIADFG + +
Sbjct: 110 EQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSV-HAPSSRRAA 168
Query: 343 DPGTYRWMAPEMIKHKSYGRKVDVYSFGLILWEMVAGTIPYEEMNPIQAAFAVVNKNLRP 402
GT ++ PEMI+ + + KVD++S G++ +E + G P+ E N Q + +++ +
Sbjct: 169 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF-EANTYQETYKRISR-VEF 226
Query: 403 AIPGDCPPAMAALIEQCWSLQPDKRP 428
P LI + P +RP
Sbjct: 227 TFPDFVTEGARDLISRLLKHNPSQRP 252
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 86/298 (28%), Positives = 140/298 (46%), Gaps = 61/298 (20%)
Query: 190 GAHSRLYHGIYKDEPVAVKIIRIPDDDENETLAARLEKQFNREVALLSR--LHNPNVIKF 247
G + ++ G ++ E VAVKI ++R EK + RE L + L + N++ F
Sbjct: 19 GRYGEVWRGSWQGENVAVKI-----------FSSRDEKSWFRETELYNTVMLRHENILGF 67
Query: 248 VAACK----KPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIALDIARGMEYIH-- 301
+A+ +IT Y GSL YL + TL + I L IA G+ ++H
Sbjct: 68 IASDMTSRHSSTQLWLITHYHEMGSLYDYL---QLTTLDTVSCLRIVLSIASGLAHLHIE 124
Query: 302 ---SQG---VIHRDLKPENVLIDQEFHLKIADFGIAC---EEVYCDALSDDP--GTYRWM 350
+QG + HRDLK +N+L+ + IAD G+A + + ++P GT R+M
Sbjct: 125 IFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYM 184
Query: 351 APEMIKHK-------SYGRKVDVYSFGLILWE----MVAGTI------PYEEMNPIQAAF 393
APE++ SY ++VD+++FGL+LWE MV+ I P+ ++ P +F
Sbjct: 185 APEVLDETIQVDCFDSY-KRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVVPNDPSF 243
Query: 394 AVVNKNL-----RPAIPGD-----CPPAMAALIEQCWSLQPDKRPEFWHIVKVLEQFE 441
+ K + RP IP ++A L+++CW P R I K L + +
Sbjct: 244 EDMRKVVCVDQQRPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKKTLTKID 301
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 109/206 (52%), Gaps = 17/206 (8%)
Query: 187 FAHGAHSRLYHGIYK--DEPVAVKIIRIPDDDENETLAARLEKQFNREVALLSRLHNPNV 244
GA+ + + + +E VAVKI+ + A + +E+ + L++ NV
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDM-------KRAVDCPENIKKEICINKMLNHENV 66
Query: 245 IKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKT-LPLPKLIAIALDIARGMEYIHSQ 303
+KF ++ + + EY S G L ++E +P P + G+ Y+H
Sbjct: 67 VKFYGHRREGNIQYLFLEYCSGGEL---FDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 123
Query: 304 GVIHRDLKPENVLIDQEFHLKIADFGIACEEVYCD---ALSDDPGTYRWMAPEMIKHKSY 360
G+ HRD+KPEN+L+D+ +LKI+DFG+A Y + L+ GT ++APE++K + +
Sbjct: 124 GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREF 183
Query: 361 -GRKVDVYSFGLILWEMVAGTIPYEE 385
VDV+S G++L M+AG +P+++
Sbjct: 184 HAEPVDVWSCGIVLTAMLAGELPWDQ 209
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 109/206 (52%), Gaps = 17/206 (8%)
Query: 187 FAHGAHSRLYHGIYK--DEPVAVKIIRIPDDDENETLAARLEKQFNREVALLSRLHNPNV 244
GA+ + + + +E VAVKI+ + A + +E+ + L++ NV
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDM-------KRAVDCPENIKKEICINKMLNHENV 66
Query: 245 IKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKT-LPLPKLIAIALDIARGMEYIHSQ 303
+KF ++ + + EY S G L ++E +P P + G+ Y+H
Sbjct: 67 VKFYGHRREGNIQYLFLEYCSGGEL---FDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 123
Query: 304 GVIHRDLKPENVLIDQEFHLKIADFGIACEEVYCD---ALSDDPGTYRWMAPEMIKHKSY 360
G+ HRD+KPEN+L+D+ +LKI+DFG+A Y + L+ GT ++APE++K + +
Sbjct: 124 GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREF 183
Query: 361 -GRKVDVYSFGLILWEMVAGTIPYEE 385
VDV+S G++L M+AG +P+++
Sbjct: 184 HAEPVDVWSCGIVLTAMLAGELPWDQ 209
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 98/206 (47%), Gaps = 5/206 (2%)
Query: 223 ARLEKQFNREVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLP 282
A +E Q REV + S L +PN+++ +I EY G++ L KL
Sbjct: 51 AGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL--SKFD 108
Query: 283 LPKLIAIALDIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIACEEVYCDALSD 342
+ ++A + Y HS+ VIHRD+KPEN+L+ LKIADFG +
Sbjct: 109 EQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSV-HAPSSRRXX 167
Query: 343 DPGTYRWMAPEMIKHKSYGRKVDVYSFGLILWEMVAGTIPYEEMNPIQAAFAVVNKNLRP 402
GT ++ PEMI+ + + KVD++S G++ +E + G P+ E N Q + +++ +
Sbjct: 168 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF-EANTYQETYKRISR-VEF 225
Query: 403 AIPGDCPPAMAALIEQCWSLQPDKRP 428
P LI + P +RP
Sbjct: 226 TFPDFVTEGARDLISRLLKHNPSQRP 251
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 86/298 (28%), Positives = 140/298 (46%), Gaps = 61/298 (20%)
Query: 190 GAHSRLYHGIYKDEPVAVKIIRIPDDDENETLAARLEKQFNREVALLSR--LHNPNVIKF 247
G + ++ G ++ E VAVKI ++R EK + RE L + L + N++ F
Sbjct: 19 GRYGEVWRGSWQGENVAVKI-----------FSSRDEKSWFRETELYNTVMLRHENILGF 67
Query: 248 VAACK----KPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIALDIARGMEYIH-- 301
+A+ +IT Y GSL YL + TL + I L IA G+ ++H
Sbjct: 68 IASDMTSRHSSTQLWLITHYHEMGSLYDYL---QLTTLDTVSCLRIVLSIASGLAHLHIE 124
Query: 302 ---SQG---VIHRDLKPENVLIDQEFHLKIADFGIAC---EEVYCDALSDDP--GTYRWM 350
+QG + HRDLK +N+L+ + IAD G+A + + ++P GT R+M
Sbjct: 125 IFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYM 184
Query: 351 APEMIKHK-------SYGRKVDVYSFGLILWE----MVAGTI------PYEEMNPIQAAF 393
APE++ SY ++VD+++FGL+LWE MV+ I P+ ++ P +F
Sbjct: 185 APEVLDETIQVDCFDSY-KRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVVPNDPSF 243
Query: 394 AVVNKNL-----RPAIPGD-----CPPAMAALIEQCWSLQPDKRPEFWHIVKVLEQFE 441
+ K + RP IP ++A L+++CW P R I K L + +
Sbjct: 244 EDMRKVVCVDQQRPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKKTLTKID 301
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 99/206 (48%), Gaps = 5/206 (2%)
Query: 223 ARLEKQFNREVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLP 282
A +E Q REV + S L +PN+++ +I EY G++ L KL
Sbjct: 49 AGVEHQLRREVEIQSHLRHPNILRLYGYFHDSTRVYLILEYAPLGTVYRELQKL--SKFD 106
Query: 283 LPKLIAIALDIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIACEEVYCDALSD 342
+ ++A + Y HS+ VIHRD+KPEN+L+ LKIADFG + +
Sbjct: 107 EQRTATYITELANALSYCHSKKVIHRDIKPENLLLGSAGELKIADFGWSV-HAPSSRRAA 165
Query: 343 DPGTYRWMAPEMIKHKSYGRKVDVYSFGLILWEMVAGTIPYEEMNPIQAAFAVVNKNLRP 402
GT ++ PEMI+ + + KVD++S G++ +E + G P+ E N Q + +++ +
Sbjct: 166 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF-EANTYQDTYKRISR-VEF 223
Query: 403 AIPGDCPPAMAALIEQCWSLQPDKRP 428
P LI + P +RP
Sbjct: 224 TFPDFVTEGARDLISRLLKHNPSQRP 249
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 56/175 (32%), Positives = 94/175 (53%), Gaps = 14/175 (8%)
Query: 232 EVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIAL 291
E +L ++ P ++K + K ++ EY+ G + ++L ++ + P + A
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAA-- 148
Query: 292 DIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIACEE-----VYCDALSDDPGT 346
I EY+HS +I+RDLKPEN+LIDQ+ ++K+ADFG A C GT
Sbjct: 149 QIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWXLC-------GT 201
Query: 347 YRWMAPEMIKHKSYGRKVDVYSFGLILWEMVAGTIPYEEMNPIQAAFAVVNKNLR 401
++APE+I K Y + VD ++ G++++EM AG P+ PIQ +V+ +R
Sbjct: 202 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR 256
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 59/180 (32%), Positives = 95/180 (52%), Gaps = 15/180 (8%)
Query: 205 VAVKIIRIPDDDENETLAARLEKQFNREVALLSRLH---NPNVIKFVAACKKPPV----- 256
VA+K +R+P+ +E ++ REVALL RL +PNV++ + C
Sbjct: 32 VALKSVRVPNGEEGLPIST------VREVALLRRLEAFEHPNVVRLMDVCATSRTDREIK 85
Query: 257 YCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIALDIARGMEYIHSQGVIHRDLKPENVL 316
++ E++ + LR YL K LP + + RG++++H+ ++HRDLKPEN+L
Sbjct: 86 VTLVFEHVDQ-DLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENIL 144
Query: 317 IDQEFHLKIADFGIACEEVYCDALSDDPGTYRWMAPEMIKHKSYGRKVDVYSFGLILWEM 376
+ +K+ADFG+A Y AL T + APE++ +Y VD++S G I EM
Sbjct: 145 VTSGGTVKLADFGLARIYSYQMALFPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEM 204
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 109/206 (52%), Gaps = 17/206 (8%)
Query: 187 FAHGAHSRLYHGIYK--DEPVAVKIIRIPDDDENETLAARLEKQFNREVALLSRLHNPNV 244
GA+ + + + +E VAVKI+ + A + +E+ + L++ NV
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDM-------KRAVDCPENIKKEIXINKMLNHENV 66
Query: 245 IKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKT-LPLPKLIAIALDIARGMEYIHSQ 303
+KF ++ + + EY S G L ++E +P P + G+ Y+H
Sbjct: 67 VKFYGHRREGNIQYLFLEYCSGGEL---FDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 123
Query: 304 GVIHRDLKPENVLIDQEFHLKIADFGIACEEVYCD---ALSDDPGTYRWMAPEMIKHKSY 360
G+ HRD+KPEN+L+D+ +LKI+DFG+A Y + L+ GT ++APE++K + +
Sbjct: 124 GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREF 183
Query: 361 -GRKVDVYSFGLILWEMVAGTIPYEE 385
VDV+S G++L M+AG +P+++
Sbjct: 184 HAEPVDVWSCGIVLTAMLAGELPWDQ 209
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 99/206 (48%), Gaps = 5/206 (2%)
Query: 223 ARLEKQFNREVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLP 282
A +E Q REV + S L +PN+++ +I EY G++ L KL
Sbjct: 49 AGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL--SKFD 106
Query: 283 LPKLIAIALDIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIACEEVYCDALSD 342
+ ++A + Y HS+ VIHRD+KPEN+L+ LKIADFG + +
Sbjct: 107 EQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSV-HAPSSRRAA 165
Query: 343 DPGTYRWMAPEMIKHKSYGRKVDVYSFGLILWEMVAGTIPYEEMNPIQAAFAVVNKNLRP 402
GT ++ PEMI+ + + KVD++S G++ +E + G P+ E N Q + +++ +
Sbjct: 166 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF-EANTYQETYKRISR-VEF 223
Query: 403 AIPGDCPPAMAALIEQCWSLQPDKRP 428
P LI + P +RP
Sbjct: 224 TFPDFVTEGARDLISRLLKHNPSQRP 249
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 68/211 (32%), Positives = 108/211 (51%), Gaps = 14/211 (6%)
Query: 226 EKQFNREVALLSRLHNPNVIKFVAAC---KKPPVYCVITEYLSEGSLRAYLHKLEHKTLP 282
E +E+ LL RL + NVI+ V +K +Y V+ EY G ++ L + K P
Sbjct: 50 EANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQKMYMVM-EYCVCG-MQEMLDSVPEKRFP 107
Query: 283 LPKLIAIALDIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIACEEVYCDALSD 342
+ + + G+EY+HSQG++H+D+KP N+L+ LKI+ G+A E ++ A D
Sbjct: 108 VCQAHGYFCQLIDGLEYLHSQGIVHKDIKPGNLLLTTGGTLKISALGVA-EALHPFAADD 166
Query: 343 ----DPGTYRWMAPEMIKHKSY--GRKVDVYSFGLILWEMVAGTIPYEEMNPIQAAFAVV 396
G+ + PE+ G KVD++S G+ L+ + G P+E N I F +
Sbjct: 167 TCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDN-IYKLFENI 225
Query: 397 NKNLRPAIPGDCPPAMAALIEQCWSLQPDKR 427
K AIPGDC P ++ L++ +P KR
Sbjct: 226 GKGSY-AIPGDCGPPLSDLLKGMLEYEPAKR 255
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 109/206 (52%), Gaps = 17/206 (8%)
Query: 187 FAHGAHSRLYHGIYK--DEPVAVKIIRIPDDDENETLAARLEKQFNREVALLSRLHNPNV 244
GA+ + + + +E VAVKI+ + A + +E+ + L++ NV
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDM-------KRAVDCPENIKKEICINKMLNHENV 67
Query: 245 IKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKT-LPLPKLIAIALDIARGMEYIHSQ 303
+KF ++ + + EY S G L ++E +P P + G+ Y+H
Sbjct: 68 VKFYGHRREGNIQYLFLEYCSGGEL---FDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 124
Query: 304 GVIHRDLKPENVLIDQEFHLKIADFGIACEEVYCD---ALSDDPGTYRWMAPEMIKHKSY 360
G+ HRD+KPEN+L+D+ +LKI+DFG+A Y + L+ GT ++APE++K + +
Sbjct: 125 GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 184
Query: 361 -GRKVDVYSFGLILWEMVAGTIPYEE 385
VDV+S G++L M+AG +P+++
Sbjct: 185 HAEPVDVWSCGIVLTAMLAGELPWDQ 210
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 109/206 (52%), Gaps = 17/206 (8%)
Query: 187 FAHGAHSRLYHGIYK--DEPVAVKIIRIPDDDENETLAARLEKQFNREVALLSRLHNPNV 244
GA+ + + + +E VAVKI+ + A + +E+ + L++ NV
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDM-------KRAVDCPENIKKEICINKMLNHENV 67
Query: 245 IKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKT-LPLPKLIAIALDIARGMEYIHSQ 303
+KF ++ + + EY S G L ++E +P P + G+ Y+H
Sbjct: 68 VKFYGHRREGNIQYLFLEYCSGGEL---FDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 124
Query: 304 GVIHRDLKPENVLIDQEFHLKIADFGIACEEVYCD---ALSDDPGTYRWMAPEMIKHKSY 360
G+ HRD+KPEN+L+D+ +LKI+DFG+A Y + L+ GT ++APE++K + +
Sbjct: 125 GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 184
Query: 361 -GRKVDVYSFGLILWEMVAGTIPYEE 385
VDV+S G++L M+AG +P+++
Sbjct: 185 HAEPVDVWSCGIVLTAMLAGELPWDQ 210
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 109/206 (52%), Gaps = 17/206 (8%)
Query: 187 FAHGAHSRLYHGIYK--DEPVAVKIIRIPDDDENETLAARLEKQFNREVALLSRLHNPNV 244
GA+ + + + +E VAVKI+ + A + +E+ + L++ NV
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDM-------KRAVDCPENIKKEICINKMLNHENV 67
Query: 245 IKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKT-LPLPKLIAIALDIARGMEYIHSQ 303
+KF ++ + + EY S G L ++E +P P + G+ Y+H
Sbjct: 68 VKFYGHRREGNIQYLFLEYCSGGEL---FDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 124
Query: 304 GVIHRDLKPENVLIDQEFHLKIADFGIACEEVYCD---ALSDDPGTYRWMAPEMIKHKSY 360
G+ HRD+KPEN+L+D+ +LKI+DFG+A Y + L+ GT ++APE++K + +
Sbjct: 125 GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 184
Query: 361 -GRKVDVYSFGLILWEMVAGTIPYEE 385
VDV+S G++L M+AG +P+++
Sbjct: 185 HAEPVDVWSCGIVLTAMLAGELPWDQ 210
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 61/236 (25%), Positives = 117/236 (49%), Gaps = 21/236 (8%)
Query: 206 AVKIIRI------PDDDENETLAARLEKQFNREVALLSRLHNPNVIKFVAACKKPPVYCV 259
AVKI+ + P+ E A R E R+VA +P++I + + + +
Sbjct: 123 AVKIMEVTAERLSPEQLEEVREATRRETHILRQVA-----GHPHIITLIDSYESSSFMFL 177
Query: 260 ITEYLSEGSLRAYLHKLEHKTLPLPKLIAIALDIARGMEYIHSQGVIHRDLKPENVLIDQ 319
+ + + +G L YL E L + +I + + ++H+ ++HRDLKPEN+L+D
Sbjct: 178 VFDLMRKGELFDYL--TEKVALSEKETRSIMRSLLEAVSFLHANNIVHRDLKPENILLDD 235
Query: 320 EFHLKIADFGIACEEVYCDALSDDPGTYRWMAPEMIK------HKSYGRKVDVYSFGLIL 373
++++DFG +C + L + GT ++APE++K H YG++VD+++ G+IL
Sbjct: 236 NMQIRLSDFGFSCHLEPGEKLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVIL 295
Query: 374 WEMVAGTIPYEEMNPIQAAFAVVNKNLRPAIP--GDCPPAMAALIEQCWSLQPDKR 427
+ ++AG+ P+ I ++ + + P D + LI + + P+ R
Sbjct: 296 FTLLAGSPPFWHRRQILMLRMIMEGQYQFSSPEWDDRSSTVKDLISRLLQVDPEAR 351
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 92.4 bits (228), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 109/206 (52%), Gaps = 17/206 (8%)
Query: 187 FAHGAHSRLYHGIYK--DEPVAVKIIRIPDDDENETLAARLEKQFNREVALLSRLHNPNV 244
GA+ + + + +E VAVKI+ + A + +E+ + L++ NV
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDM-------KRAVDCPENIKKEIXINKMLNHENV 67
Query: 245 IKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKT-LPLPKLIAIALDIARGMEYIHSQ 303
+KF ++ + + EY S G L ++E +P P + G+ Y+H
Sbjct: 68 VKFYGHRREGNIQYLFLEYCSGGEL---FDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 124
Query: 304 GVIHRDLKPENVLIDQEFHLKIADFGIACEEVYCD---ALSDDPGTYRWMAPEMIKHKSY 360
G+ HRD+KPEN+L+D+ +LKI+DFG+A Y + L+ GT ++APE++K + +
Sbjct: 125 GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREF 184
Query: 361 -GRKVDVYSFGLILWEMVAGTIPYEE 385
VDV+S G++L M+AG +P+++
Sbjct: 185 HAEPVDVWSCGIVLTAMLAGELPWDQ 210
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 92.4 bits (228), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 101/213 (47%), Gaps = 5/213 (2%)
Query: 223 ARLEKQFNREVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLP 282
A +E Q REV + S L +PN+++ +I EY G++ L KL
Sbjct: 54 AGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL--SKFD 111
Query: 283 LPKLIAIALDIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIACEEVYCDALSD 342
+ ++A + Y HS+ VIHRD+KPEN+L+ LKIADFG + +
Sbjct: 112 EQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSV-HAPSSRRTT 170
Query: 343 DPGTYRWMAPEMIKHKSYGRKVDVYSFGLILWEMVAGTIPYEEMNPIQAAFAVVNKNLRP 402
GT ++ PE I+ + + KVD++S G++ +E + G P+ E N Q + +++ +
Sbjct: 171 LCGTLDYLPPEXIEGRXHDEKVDLWSLGVLCYEFLVGKPPF-EANTYQETYKRISR-VEF 228
Query: 403 AIPGDCPPAMAALIEQCWSLQPDKRPEFWHIVK 435
P LI + P +RP +++
Sbjct: 229 TFPDFVTEGARDLISRLLKHNPSQRPXLREVLE 261
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 92.4 bits (228), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 110/206 (53%), Gaps = 17/206 (8%)
Query: 187 FAHGAHSRLYHGIYK--DEPVAVKIIRIPDDDENETLAARLEKQFNREVALLSRLHNPNV 244
GA+ + + + +E VAVKI+ + A + +E+ + + L++ NV
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDM-------KRAVDCPENIKKEICINAMLNHENV 67
Query: 245 IKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKT-LPLPKLIAIALDIARGMEYIHSQ 303
+KF ++ + + EY S G L ++E +P P + G+ Y+H
Sbjct: 68 VKFYGHRREGNIQYLFLEYCSGGEL---FDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 124
Query: 304 GVIHRDLKPENVLIDQEFHLKIADFGIACEEVYCD---ALSDDPGTYRWMAPEMIKHKSY 360
G+ HRD+KPEN+L+D+ +LKI+DFG+A Y + L+ GT ++APE++K + +
Sbjct: 125 GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 184
Query: 361 -GRKVDVYSFGLILWEMVAGTIPYEE 385
VDV+S G++L M+AG +P+++
Sbjct: 185 HAEPVDVWSCGIVLTAMLAGELPWDQ 210
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 92.0 bits (227), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 109/206 (52%), Gaps = 17/206 (8%)
Query: 187 FAHGAHSRLYHGIYK--DEPVAVKIIRIPDDDENETLAARLEKQFNREVALLSRLHNPNV 244
GA+ + + + +E VAVKI+ + A + +E+ + L++ NV
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDM-------KRAVDCPENIKKEICINKMLNHENV 66
Query: 245 IKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKT-LPLPKLIAIALDIARGMEYIHSQ 303
+KF ++ + + EY S G L ++E +P P + G+ Y+H
Sbjct: 67 VKFYGHRREGNIQYLFLEYCSGGEL---FDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 123
Query: 304 GVIHRDLKPENVLIDQEFHLKIADFGIACEEVYCD---ALSDDPGTYRWMAPEMIKHKSY 360
G+ HRD+KPEN+L+D+ +LKI+DFG+A Y + L+ GT ++APE++K + +
Sbjct: 124 GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREF 183
Query: 361 -GRKVDVYSFGLILWEMVAGTIPYEE 385
VDV+S G++L M+AG +P+++
Sbjct: 184 HAEPVDVWSCGIVLTAMLAGELPWDQ 209
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 92.0 bits (227), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 103/212 (48%), Gaps = 21/212 (9%)
Query: 232 EVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKT--LPLPKLIAI 289
E +L+++H+ ++ A + C++ ++ G +R +++ ++ P+ I
Sbjct: 235 EKKILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFY 294
Query: 290 ALDIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIACE----EVYCDALSDDPG 345
I G+E++H + +I+RDLKPENVL+D + +++I+D G+A E + + PG
Sbjct: 295 TAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPG 354
Query: 346 TYRWMAPEMIKHKSYGRKVDVYSFGLILWEMVAGTIPYEEMNPIQAAFAVVNKNLRPAI- 404
+MAPE++ + Y VD ++ G+ L+EM+A P+ V NK L+ +
Sbjct: 355 ---FMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGE-----KVENKELKQRVL 406
Query: 405 ------PGDCPPAMAALIEQCWSLQPDKRPEF 430
P PA E P+KR F
Sbjct: 407 EQAVTYPDKFSPASKDFCEALLQKDPEKRLGF 438
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 92.0 bits (227), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 103/212 (48%), Gaps = 21/212 (9%)
Query: 232 EVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKT--LPLPKLIAI 289
E +L+++H+ ++ A + C++ ++ G +R +++ ++ P+ I
Sbjct: 235 EKKILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFY 294
Query: 290 ALDIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIACE----EVYCDALSDDPG 345
I G+E++H + +I+RDLKPENVL+D + +++I+D G+A E + + PG
Sbjct: 295 TAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPG 354
Query: 346 TYRWMAPEMIKHKSYGRKVDVYSFGLILWEMVAGTIPYEEMNPIQAAFAVVNKNLRPAI- 404
+MAPE++ + Y VD ++ G+ L+EM+A P+ V NK L+ +
Sbjct: 355 ---FMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGE-----KVENKELKQRVL 406
Query: 405 ------PGDCPPAMAALIEQCWSLQPDKRPEF 430
P PA E P+KR F
Sbjct: 407 EQAVTYPDKFSPASKDFCEALLQKDPEKRLGF 438
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 92.0 bits (227), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 103/212 (48%), Gaps = 21/212 (9%)
Query: 232 EVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKT--LPLPKLIAI 289
E +L+++H+ ++ A + C++ ++ G +R +++ ++ P+ I
Sbjct: 235 EKKILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFY 294
Query: 290 ALDIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIACE----EVYCDALSDDPG 345
I G+E++H + +I+RDLKPENVL+D + +++I+D G+A E + + PG
Sbjct: 295 TAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPG 354
Query: 346 TYRWMAPEMIKHKSYGRKVDVYSFGLILWEMVAGTIPYEEMNPIQAAFAVVNKNLRPAI- 404
+MAPE++ + Y VD ++ G+ L+EM+A P+ V NK L+ +
Sbjct: 355 ---FMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGE-----KVENKELKQRVL 406
Query: 405 ------PGDCPPAMAALIEQCWSLQPDKRPEF 430
P PA E P+KR F
Sbjct: 407 EQAVTYPDKFSPASKDFCEALLQKDPEKRLGF 438
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 92.0 bits (227), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 98/206 (47%), Gaps = 5/206 (2%)
Query: 223 ARLEKQFNREVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLP 282
A +E Q REV + S L +PN+++ +I EY G++ L KL
Sbjct: 52 AGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL--SKFD 109
Query: 283 LPKLIAIALDIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIACEEVYCDALSD 342
+ ++A + Y HS+ VIHRD+KPEN+L+ LKIADFG +
Sbjct: 110 EQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSV-HAPSSRRXX 168
Query: 343 DPGTYRWMAPEMIKHKSYGRKVDVYSFGLILWEMVAGTIPYEEMNPIQAAFAVVNKNLRP 402
GT ++ PEMI+ + + KVD++S G++ +E + G P+ E N Q + +++ +
Sbjct: 169 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF-EANTYQETYKRISR-VEF 226
Query: 403 AIPGDCPPAMAALIEQCWSLQPDKRP 428
P LI + P +RP
Sbjct: 227 TFPDFVTEGARDLISRLLKHNPSQRP 252
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 92.0 bits (227), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 109/206 (52%), Gaps = 17/206 (8%)
Query: 187 FAHGAHSRLYHGIYK--DEPVAVKIIRIPDDDENETLAARLEKQFNREVALLSRLHNPNV 244
GA+ + + + +E VAVKI+ + A + +E+ + L++ NV
Sbjct: 13 LGEGAYGEVQLAVNRVTEEAVAVKIVDM-------KRAVDCPENIKKEICINKMLNHENV 65
Query: 245 IKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKT-LPLPKLIAIALDIARGMEYIHSQ 303
+KF ++ + + EY S G L ++E +P P + G+ Y+H
Sbjct: 66 VKFYGHRREGNIQYLFLEYCSGGEL---FDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 122
Query: 304 GVIHRDLKPENVLIDQEFHLKIADFGIACEEVYCD---ALSDDPGTYRWMAPEMIKHKSY 360
G+ HRD+KPEN+L+D+ +LKI+DFG+A Y + L+ GT ++APE++K + +
Sbjct: 123 GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 182
Query: 361 -GRKVDVYSFGLILWEMVAGTIPYEE 385
VDV+S G++L M+AG +P+++
Sbjct: 183 HAEPVDVWSCGIVLTAMLAGELPWDQ 208
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 92.0 bits (227), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 109/206 (52%), Gaps = 17/206 (8%)
Query: 187 FAHGAHSRLYHGIYK--DEPVAVKIIRIPDDDENETLAARLEKQFNREVALLSRLHNPNV 244
GA+ + + + +E VAVKI+ + A + +E+ + L++ NV
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDM-------KRAVDCPENIKKEICINKMLNHENV 66
Query: 245 IKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKT-LPLPKLIAIALDIARGMEYIHSQ 303
+KF ++ + + EY S G L ++E +P P + G+ Y+H
Sbjct: 67 VKFYGHRREGNIQYLFLEYCSGGEL---FDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 123
Query: 304 GVIHRDLKPENVLIDQEFHLKIADFGIACEEVYCD---ALSDDPGTYRWMAPEMIKHKSY 360
G+ HRD+KPEN+L+D+ +LKI+DFG+A Y + L+ GT ++APE++K + +
Sbjct: 124 GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 183
Query: 361 -GRKVDVYSFGLILWEMVAGTIPYEE 385
VDV+S G++L M+AG +P+++
Sbjct: 184 HAEPVDVWSCGIVLTAMLAGELPWDQ 209
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 92.0 bits (227), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 98/206 (47%), Gaps = 5/206 (2%)
Query: 223 ARLEKQFNREVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLP 282
A +E Q REV + S L +PN+++ +I EY G++ L KL
Sbjct: 49 AGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL--SKFD 106
Query: 283 LPKLIAIALDIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIACEEVYCDALSD 342
+ ++A + Y HS+ VIHRD+KPEN+L+ LKIADFG +
Sbjct: 107 EQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSV-HAPSSRRXX 165
Query: 343 DPGTYRWMAPEMIKHKSYGRKVDVYSFGLILWEMVAGTIPYEEMNPIQAAFAVVNKNLRP 402
GT ++ PEMI+ + + KVD++S G++ +E + G P+ E N Q + +++ +
Sbjct: 166 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF-EANTYQETYKRISR-VEF 223
Query: 403 AIPGDCPPAMAALIEQCWSLQPDKRP 428
P LI + P +RP
Sbjct: 224 TFPDFVTEGARDLISRLLKHNPSQRP 249
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 92.0 bits (227), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 61/167 (36%), Positives = 98/167 (58%), Gaps = 17/167 (10%)
Query: 227 KQFNREVALLSRLHNPNVIKFVAACKKPP---VYCVITEYLSEGSLRAYLHKLEHKTL-P 282
+Q +E+A+L +L +PNV+K V P +Y V E +++G + +E TL P
Sbjct: 81 EQVYQEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVF-ELVNQGPV------MEVPTLKP 133
Query: 283 LPKLIA--IALDIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIACEEVYCDA- 339
L + A D+ +G+EY+H Q +IHRD+KP N+L+ ++ H+KIADFG++ E DA
Sbjct: 134 LSEDQARFYFQDLIKGIEYLHYQKIIHRDIKPSNLLVGEDGHIKIADFGVSNEFKGSDAL 193
Query: 340 LSDDPGTYRWMAPEMIKHKS---YGRKVDVYSFGLILWEMVAGTIPY 383
LS+ GT +MAPE + G+ +DV++ G+ L+ V G P+
Sbjct: 194 LSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPF 240
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 92.0 bits (227), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 107/201 (53%), Gaps = 17/201 (8%)
Query: 206 AVKIIR----IPDDDENETLAARLEKQFNREVALLSRLHNPNVIKFVAACKKPPVYCVIT 261
AVK+++ + DDD T+ + + L+R H P + + + P +
Sbjct: 52 AVKVLKKDVILQDDDVECTMT-------EKRILSLARNH-PFLTQLFCCFQTPDRLFFVM 103
Query: 262 EYLSEGSLRAYLHKLEHKTLPLPKLIAIALDIARGMEYIHSQGVIHRDLKPENVLIDQEF 321
E+++ G L ++ K + + A +I + ++H +G+I+RDLK +NVL+D E
Sbjct: 104 EFVNGGDLMFHIQK--SRRFDEARARFYAAEIISALMFLHDKGIIYRDLKLDNVLLDHEG 161
Query: 322 HLKIADFGIACEEVYCDALSDDP--GTYRWMAPEMIKHKSYGRKVDVYSFGLILWEMVAG 379
H K+ADFG+ C+E C+ ++ GT ++APE+++ YG VD ++ G++L+EM+ G
Sbjct: 162 HCKLADFGM-CKEGICNGVTTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCG 220
Query: 380 TIPYEEMNPIQAAFAVVNKNL 400
P+E N A++N +
Sbjct: 221 HAPFEAENEDDLFEAILNDEV 241
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 92.0 bits (227), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 109/206 (52%), Gaps = 17/206 (8%)
Query: 187 FAHGAHSRLYHGIYK--DEPVAVKIIRIPDDDENETLAARLEKQFNREVALLSRLHNPNV 244
GA+ + + + +E VAVKI+ + A + +E+ + L++ NV
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDM-------KRAVDCPENIKKEIXINKMLNHENV 66
Query: 245 IKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKT-LPLPKLIAIALDIARGMEYIHSQ 303
+KF ++ + + EY S G L ++E +P P + G+ Y+H
Sbjct: 67 VKFYGHRREGNIQYLFLEYCSGGEL---FDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 123
Query: 304 GVIHRDLKPENVLIDQEFHLKIADFGIACEEVYCD---ALSDDPGTYRWMAPEMIKHKSY 360
G+ HRD+KPEN+L+D+ +LKI+DFG+A Y + L+ GT ++APE++K + +
Sbjct: 124 GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 183
Query: 361 -GRKVDVYSFGLILWEMVAGTIPYEE 385
VDV+S G++L M+AG +P+++
Sbjct: 184 HAEPVDVWSCGIVLTAMLAGELPWDQ 209
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 92.0 bits (227), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 109/206 (52%), Gaps = 17/206 (8%)
Query: 187 FAHGAHSRLYHGIYK--DEPVAVKIIRIPDDDENETLAARLEKQFNREVALLSRLHNPNV 244
GA+ + + + +E VAVKI+ + A + +E+ + L++ NV
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDM-------KRAVDCPENIKKEICINKMLNHENV 66
Query: 245 IKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKT-LPLPKLIAIALDIARGMEYIHSQ 303
+KF ++ + + EY S G L ++E +P P + G+ Y+H
Sbjct: 67 VKFYGHRREGNIQYLFLEYCSGGEL---FDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 123
Query: 304 GVIHRDLKPENVLIDQEFHLKIADFGIACEEVYCD---ALSDDPGTYRWMAPEMIKHKSY 360
G+ HRD+KPEN+L+D+ +LKI+DFG+A Y + L+ GT ++APE++K + +
Sbjct: 124 GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 183
Query: 361 -GRKVDVYSFGLILWEMVAGTIPYEE 385
VDV+S G++L M+AG +P+++
Sbjct: 184 HAEPVDVWSCGIVLTAMLAGELPWDQ 209
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 92.0 bits (227), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 109/206 (52%), Gaps = 17/206 (8%)
Query: 187 FAHGAHSRLYHGIYK--DEPVAVKIIRIPDDDENETLAARLEKQFNREVALLSRLHNPNV 244
GA+ + + + +E VAVKI+ + A + +E+ + L++ NV
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDM-------KRAVDCPENIKKEICINKMLNHENV 66
Query: 245 IKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKT-LPLPKLIAIALDIARGMEYIHSQ 303
+KF ++ + + EY S G L ++E +P P + G+ Y+H
Sbjct: 67 VKFYGHRREGNIQYLFLEYCSGGEL---FDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 123
Query: 304 GVIHRDLKPENVLIDQEFHLKIADFGIACEEVYCD---ALSDDPGTYRWMAPEMIKHKSY 360
G+ HRD+KPEN+L+D+ +LKI+DFG+A Y + L+ GT ++APE++K + +
Sbjct: 124 GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 183
Query: 361 -GRKVDVYSFGLILWEMVAGTIPYEE 385
VDV+S G++L M+AG +P+++
Sbjct: 184 HAEPVDVWSCGIVLTAMLAGELPWDQ 209
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 91.7 bits (226), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 110/206 (53%), Gaps = 11/206 (5%)
Query: 231 REVALLSRLH-NPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAI 289
+EV +L ++ +PN+I+ + + ++ + + +G L YL E TL + I
Sbjct: 72 KEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYL--TEKVTLSEKETRKI 129
Query: 290 ALDIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIACEEVYCDALSDDPGTYRW 349
+ + +H ++HRDLKPEN+L+D + ++K+ DFG +C+ + L + GT +
Sbjct: 130 MRALLEVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLREVCGTPSY 189
Query: 350 MAPEMIK------HKSYGRKVDVYSFGLILWEMVAGTIPYEEMNPIQAAFAVVNKNLRPA 403
+APE+I+ H YG++VD++S G+I++ ++AG+ P+ + +++ N +
Sbjct: 190 LAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFG 249
Query: 404 IP--GDCPPAMAALIEQCWSLQPDKR 427
P D + L+ + +QP KR
Sbjct: 250 SPEWDDYSDTVKDLVSRFLVVQPQKR 275
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 91.7 bits (226), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 103/212 (48%), Gaps = 21/212 (9%)
Query: 232 EVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKT--LPLPKLIAI 289
E +L+++H+ ++ A + C++ ++ G +R +++ ++ P+ I
Sbjct: 235 EKKILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFY 294
Query: 290 ALDIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIACE----EVYCDALSDDPG 345
I G+E++H + +I+RDLKPENVL+D + +++I+D G+A E + + PG
Sbjct: 295 TAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPG 354
Query: 346 TYRWMAPEMIKHKSYGRKVDVYSFGLILWEMVAGTIPYEEMNPIQAAFAVVNKNLRPAI- 404
+MAPE++ + Y VD ++ G+ L+EM+A P+ V NK L+ +
Sbjct: 355 ---FMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGE-----KVENKELKQRVL 406
Query: 405 ------PGDCPPAMAALIEQCWSLQPDKRPEF 430
P PA E P+KR F
Sbjct: 407 EQAVTYPDKFSPASKDFCEALLQKDPEKRLGF 438
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 91.7 bits (226), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 68/239 (28%), Positives = 121/239 (50%), Gaps = 21/239 (8%)
Query: 203 EPVAVKIIRIPDDDENETLAAR--LEKQFNREVALLSRLHNPNVIKFVAACKKPPVYCVI 260
+ VA+KII N+ + A+ ++ + RE++ L L +P++IK K ++
Sbjct: 39 QKVALKII-------NKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMV 91
Query: 261 TEYLSEGSLRAYLHKLEHKTLPLPKLIAIALDIARGMEYIHSQGVIHRDLKPENVLIDQE 320
EY + L Y+ ++ + + I +EY H ++HRDLKPEN+L+D+
Sbjct: 92 IEY-AGNELFDYI--VQRDKMSEQEARRFFQQIISAVEYCHRHKIVHRDLKPENLLLDEH 148
Query: 321 FHLKIADFGIACEEVYCDALSDDPGTYRWMAPEMIKHKSY-GRKVDVYSFGLILWEMVAG 379
++KIADFG++ + L G+ + APE+I K Y G +VDV+S G+IL+ M+
Sbjct: 149 LNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCR 208
Query: 380 TIPYEEMNPIQAAFAVVNKNLRPAI---PGDCPPAMAALIEQCWSLQPDKRPEFWHIVK 435
+P+++ + V+ KN+ + P P A LI++ + P R I++
Sbjct: 209 RLPFDD-----ESIPVLFKNISNGVYTLPKFLSPGAAGLIKRMLIVNPLNRISIHEIMQ 262
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 91.7 bits (226), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 109/206 (52%), Gaps = 17/206 (8%)
Query: 187 FAHGAHSRLYHGIYK--DEPVAVKIIRIPDDDENETLAARLEKQFNREVALLSRLHNPNV 244
GA+ + + + +E VAVKI+ + A + +E+ + L++ NV
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDM-------KRAVDCPENIKKEICINKMLNHENV 67
Query: 245 IKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKT-LPLPKLIAIALDIARGMEYIHSQ 303
+KF ++ + + EY S G L ++E +P P + G+ Y+H
Sbjct: 68 VKFYGHRREGNIQYLFLEYCSGGEL---FDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 124
Query: 304 GVIHRDLKPENVLIDQEFHLKIADFGIACEEVYCD---ALSDDPGTYRWMAPEMIKHKSY 360
G+ HRD+KPEN+L+D+ +LKI+DFG+A Y + L+ GT ++APE++K + +
Sbjct: 125 GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 184
Query: 361 -GRKVDVYSFGLILWEMVAGTIPYEE 385
VDV+S G++L M+AG +P+++
Sbjct: 185 HAEPVDVWSCGIVLTAMLAGELPWDQ 210
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 91.7 bits (226), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 99/198 (50%), Gaps = 7/198 (3%)
Query: 232 EVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIAL 291
E +L +P + A + C + EY + G L + H + +
Sbjct: 55 ESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGEL--FFHLSRERVFTEERARFYGA 112
Query: 292 DIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIACEEVYCDALSDDP--GTYRW 349
+I +EY+HS+ V++RD+K EN+++D++ H+KI DFG+ C+E D + GT +
Sbjct: 113 EIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGL-CKEGISDGATMKTFCGTPEY 171
Query: 350 MAPEMIKHKSYGRKVDVYSFGLILWEMVAGTIPYEEMNPIQAAFAVVNKNLRPAIPGDCP 409
+APE+++ YGR VD + G++++EM+ G +P+ + + ++ + +R P
Sbjct: 172 LAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIR--FPRTLS 229
Query: 410 PAMAALIEQCWSLQPDKR 427
P +L+ P +R
Sbjct: 230 PEAKSLLAGLLKKDPKQR 247
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 91.7 bits (226), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 71/276 (25%), Positives = 130/276 (47%), Gaps = 14/276 (5%)
Query: 178 LSQLFLGLRFAHGAHSRLYHG--IYKDEPVAVKIIRIPDDDENETLAARLEKQFNREVAL 235
L+ + + G S +Y + PVA+K ++I D + A+ +E+ L
Sbjct: 31 LANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFD-----LMDAKARADCIKEIDL 85
Query: 236 LSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLH--KLEHKTLPLPKLIAIALDI 293
L +L++PNVIK+ A+ + ++ E G L + K + + +P + + +
Sbjct: 86 LKQLNHPNVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQL 145
Query: 294 ARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIA-CEEVYCDALSDDPGTYRWMAP 352
+E++HS+ V+HRD+KP NV I +K+ D G+ A GT +M+P
Sbjct: 146 CSALEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSP 205
Query: 353 EMIKHKSYGRKVDVYSFGLILWEMVAGTIPY--EEMNPIQAAFAVVNKNLRPAIPGD-CP 409
E I Y K D++S G +L+EM A P+ ++MN + + + + P +P D
Sbjct: 206 ERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMN-LYSLCKKIEQCDYPPLPSDHYS 264
Query: 410 PAMAALIEQCWSLQPDKRPEFWHIVKVLEQFETSLA 445
+ L+ C + P+KRP+ ++ V ++ A
Sbjct: 265 EELRQLVNMCINPDPEKRPDVTYVYDVAKRMHACTA 300
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 91.7 bits (226), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 109/206 (52%), Gaps = 17/206 (8%)
Query: 187 FAHGAHSRLYHGIYK--DEPVAVKIIRIPDDDENETLAARLEKQFNREVALLSRLHNPNV 244
GA+ + + + +E VAVKI+ + A + +E+ + L++ NV
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDM-------KRAVDCPENIKKEICINKMLNHENV 66
Query: 245 IKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKT-LPLPKLIAIALDIARGMEYIHSQ 303
+KF ++ + + EY S G L ++E +P P + G+ Y+H
Sbjct: 67 VKFYGHRREGNIQYLFLEYCSGGEL---FDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 123
Query: 304 GVIHRDLKPENVLIDQEFHLKIADFGIACEEVYCD---ALSDDPGTYRWMAPEMIKHKSY 360
G+ HRD+KPEN+L+D+ +LKI+DFG+A Y + L+ GT ++APE++K + +
Sbjct: 124 GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 183
Query: 361 -GRKVDVYSFGLILWEMVAGTIPYEE 385
VDV+S G++L M+AG +P+++
Sbjct: 184 HAEPVDVWSCGIVLTAMLAGELPWDQ 209
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 91.7 bits (226), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 109/206 (52%), Gaps = 17/206 (8%)
Query: 187 FAHGAHSRLYHGIYK--DEPVAVKIIRIPDDDENETLAARLEKQFNREVALLSRLHNPNV 244
GA+ + + + +E VAVKI+ + A + +E+ + L++ NV
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDM-------KRAVDCPENIKKEICINKMLNHENV 67
Query: 245 IKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKT-LPLPKLIAIALDIARGMEYIHSQ 303
+KF ++ + + EY S G L ++E +P P + G+ Y+H
Sbjct: 68 VKFYGHRREGNIQYLFLEYCSGGEL---FDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 124
Query: 304 GVIHRDLKPENVLIDQEFHLKIADFGIACEEVYCD---ALSDDPGTYRWMAPEMIKHKSY 360
G+ HRD+KPEN+L+D+ +LKI+DFG+A Y + L+ GT ++APE++K + +
Sbjct: 125 GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 184
Query: 361 -GRKVDVYSFGLILWEMVAGTIPYEE 385
VDV+S G++L M+AG +P+++
Sbjct: 185 HAEPVDVWSCGIVLTAMLAGELPWDQ 210
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 91.7 bits (226), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 99/206 (48%), Gaps = 5/206 (2%)
Query: 223 ARLEKQFNREVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLP 282
A +E Q REV + S L +PN+++ +I EY G++ L KL
Sbjct: 51 AGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL--SKFD 108
Query: 283 LPKLIAIALDIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIACEEVYCDALSD 342
+ ++A + Y HS+ VIHRD+KPEN+L+ LKIA+FG + +
Sbjct: 109 EQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIANFGWSV-HAPSSRRTT 167
Query: 343 DPGTYRWMAPEMIKHKSYGRKVDVYSFGLILWEMVAGTIPYEEMNPIQAAFAVVNKNLRP 402
GT ++ PEMI+ + + KVD++S G++ +E + G P+ E N Q + +++ +
Sbjct: 168 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF-EANTYQETYKRISR-VEF 225
Query: 403 AIPGDCPPAMAALIEQCWSLQPDKRP 428
P LI + P +RP
Sbjct: 226 TFPDFVTEGARDLISRLLKHNPSQRP 251
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 91.7 bits (226), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 55/164 (33%), Positives = 87/164 (53%), Gaps = 7/164 (4%)
Query: 223 ARLEKQFNREVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLP 282
A +E Q REV + S L +PN+++ +I EY G++ L KL
Sbjct: 53 AGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSR--FD 110
Query: 283 LPKLIAIALDIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIACEEVYCDALSD 342
+ ++A + Y HS+ VIHRD+KPEN+L+ LKIADFG + V+ +
Sbjct: 111 EQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSNGELKIADFGWS---VHAPSSRR 167
Query: 343 DP--GTYRWMAPEMIKHKSYGRKVDVYSFGLILWEMVAGTIPYE 384
D GT ++ PEMI+ + + KVD++S G++ +E + G P+E
Sbjct: 168 DTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGMPPFE 211
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 91.7 bits (226), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 99/198 (50%), Gaps = 7/198 (3%)
Query: 232 EVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIAL 291
E +L +P + A + C + EY + G L + H + +
Sbjct: 58 ESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGEL--FFHLSRERVFTEERARFYGA 115
Query: 292 DIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIACEEVYCDALSDDP--GTYRW 349
+I +EY+HS+ V++RD+K EN+++D++ H+KI DFG+ C+E D + GT +
Sbjct: 116 EIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGL-CKEGISDGATMKTFCGTPEY 174
Query: 350 MAPEMIKHKSYGRKVDVYSFGLILWEMVAGTIPYEEMNPIQAAFAVVNKNLRPAIPGDCP 409
+APE+++ YGR VD + G++++EM+ G +P+ + + ++ + +R P
Sbjct: 175 LAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIR--FPRTLS 232
Query: 410 PAMAALIEQCWSLQPDKR 427
P +L+ P +R
Sbjct: 233 PEAKSLLAGLLKKDPKQR 250
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 91.7 bits (226), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 69/248 (27%), Positives = 121/248 (48%), Gaps = 18/248 (7%)
Query: 208 KIIRIPDDDENETLAARL-----------EKQFNREVALLSRLHNPNVIKFVAACKKPPV 256
K I D D E A ++ +++ + E+A+ L NP+V+ F +
Sbjct: 41 KCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHGFFEDDDF 100
Query: 257 YCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIALDIARGMEYIHSQGVIHRDLKPENVL 316
V+ E SL LHK K + P+ +G++Y+H+ VIHRDLK N+
Sbjct: 101 VYVVLEICRRRSLLE-LHK-RRKAVTEPEARYFMRQTIQGVQYLHNNRVIHRDLKLGNLF 158
Query: 317 IDQEFHLKIADFGIACE-EVYCDALSDDPGTYRWMAPEMIKHKSYGRKVDVYSFGLILWE 375
++ + +KI DFG+A + E + D GT ++APE++ K + +VD++S G IL+
Sbjct: 159 LNDDMDVKIGDFGLATKIEFDGERKKDLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYT 218
Query: 376 MVAGTIPYEEMNPIQAAFAVVNKNLRPAIPGDCPPAMAALIEQCWSLQPDKRPEFWHIVK 435
++ G P+ E + ++ + + KN ++P P +ALI + P RP ++
Sbjct: 219 LLVGKPPF-ETSCLKETYIRIKKN-EYSVPRHINPVASALIRRMLHADPTLRPSVAELLT 276
Query: 436 VLEQFETS 443
++F TS
Sbjct: 277 --DEFFTS 282
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 91.7 bits (226), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 109/206 (52%), Gaps = 17/206 (8%)
Query: 187 FAHGAHSRLYHGIYK--DEPVAVKIIRIPDDDENETLAARLEKQFNREVALLSRLHNPNV 244
GA+ + + + +E VAVKI+ + A + +E+ + L++ NV
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDM-------KRAVDCPENIKKEICINKMLNHENV 66
Query: 245 IKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKT-LPLPKLIAIALDIARGMEYIHSQ 303
+KF ++ + + EY S G L ++E +P P + G+ Y+H
Sbjct: 67 VKFYGHRREGNIQYLFLEYCSGGEL---FDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 123
Query: 304 GVIHRDLKPENVLIDQEFHLKIADFGIACEEVYCD---ALSDDPGTYRWMAPEMIKHKSY 360
G+ HRD+KPEN+L+D+ +LKI+DFG+A Y + L+ GT ++APE++K + +
Sbjct: 124 GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 183
Query: 361 -GRKVDVYSFGLILWEMVAGTIPYEE 385
VDV+S G++L M+AG +P+++
Sbjct: 184 HAEPVDVWSCGIVLTAMLAGELPWDQ 209
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 91.7 bits (226), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 99/206 (48%), Gaps = 5/206 (2%)
Query: 223 ARLEKQFNREVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLP 282
A +E Q REV + S L +PN+++ +I EY G++ L KL
Sbjct: 52 AGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL--SKFD 109
Query: 283 LPKLIAIALDIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIACEEVYCDALSD 342
+ ++A + Y HS+ VIHRD+KPEN+L+ LKIA+FG + +
Sbjct: 110 EQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIANFGWSV-HAPSSRRTT 168
Query: 343 DPGTYRWMAPEMIKHKSYGRKVDVYSFGLILWEMVAGTIPYEEMNPIQAAFAVVNKNLRP 402
GT ++ PEMI+ + + KVD++S G++ +E + G P+ E N Q + +++ +
Sbjct: 169 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF-EANTYQETYKRISR-VEF 226
Query: 403 AIPGDCPPAMAALIEQCWSLQPDKRP 428
P LI + P +RP
Sbjct: 227 TFPDFVTEGARDLISRLLKHNPSQRP 252
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 91.7 bits (226), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 68/239 (28%), Positives = 121/239 (50%), Gaps = 21/239 (8%)
Query: 203 EPVAVKIIRIPDDDENETLAAR--LEKQFNREVALLSRLHNPNVIKFVAACKKPPVYCVI 260
+ VA+KII N+ + A+ ++ + RE++ L L +P++IK K ++
Sbjct: 40 QKVALKII-------NKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMV 92
Query: 261 TEYLSEGSLRAYLHKLEHKTLPLPKLIAIALDIARGMEYIHSQGVIHRDLKPENVLIDQE 320
EY + L Y+ ++ + + I +EY H ++HRDLKPEN+L+D+
Sbjct: 93 IEY-AGNELFDYI--VQRDKMSEQEARRFFQQIISAVEYCHRHKIVHRDLKPENLLLDEH 149
Query: 321 FHLKIADFGIACEEVYCDALSDDPGTYRWMAPEMIKHKSY-GRKVDVYSFGLILWEMVAG 379
++KIADFG++ + L G+ + APE+I K Y G +VDV+S G+IL+ M+
Sbjct: 150 LNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCR 209
Query: 380 TIPYEEMNPIQAAFAVVNKNLRPAI---PGDCPPAMAALIEQCWSLQPDKRPEFWHIVK 435
+P+++ + V+ KN+ + P P A LI++ + P R I++
Sbjct: 210 RLPFDD-----ESIPVLFKNISNGVYTLPKFLSPGAAGLIKRMLIVNPLNRISIHEIMQ 263
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 91.7 bits (226), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 59/189 (31%), Positives = 103/189 (54%), Gaps = 15/189 (7%)
Query: 202 DEPVAVKIIRIPDDDENETLAARLEKQFNREVALLSRLHNPNVIKFVAACKKPPVYCVIT 261
+E VAVKI+ + A + +E+ + L++ NV+KF ++ + +
Sbjct: 31 EEAVAVKIVDM-------KRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFL 83
Query: 262 EYLSEGSLRAYLHKLEHKT-LPLPKLIAIALDIARGMEYIHSQGVIHRDLKPENVLIDQE 320
EY S G L ++E +P P + G+ Y+H G+ HRD+KPEN+L+D+
Sbjct: 84 EYCSGGEL---FDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDER 140
Query: 321 FHLKIADFGIACEEVYCD---ALSDDPGTYRWMAPEMIKHKSY-GRKVDVYSFGLILWEM 376
+LKI+DFG+A Y + L+ GT ++APE++K + + VDV+S G++L M
Sbjct: 141 DNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAM 200
Query: 377 VAGTIPYEE 385
+AG +P+++
Sbjct: 201 LAGELPWDQ 209
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 91.7 bits (226), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 99/198 (50%), Gaps = 7/198 (3%)
Query: 232 EVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIAL 291
E +L +P + A + C + EY + G L + H + +
Sbjct: 55 ESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGEL--FFHLSRERVFTEERARFYGA 112
Query: 292 DIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIACEEVYCDA--LSDDPGTYRW 349
+I +EY+HS+ V++RD+K EN+++D++ H+KI DFG+ C+E D + GT +
Sbjct: 113 EIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGL-CKEGISDGATMKXFCGTPEY 171
Query: 350 MAPEMIKHKSYGRKVDVYSFGLILWEMVAGTIPYEEMNPIQAAFAVVNKNLRPAIPGDCP 409
+APE+++ YGR VD + G++++EM+ G +P+ + + ++ + +R P
Sbjct: 172 LAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIR--FPRTLS 229
Query: 410 PAMAALIEQCWSLQPDKR 427
P +L+ P +R
Sbjct: 230 PEAKSLLAGLLKKDPKQR 247
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 53/170 (31%), Positives = 94/170 (55%), Gaps = 4/170 (2%)
Query: 232 EVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIAL 291
E +L ++ P ++K + K ++ EY++ G + ++L ++ + P + A
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAA-- 148
Query: 292 DIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIACEEVYCDALSDDPGTYRWMA 351
I EY+HS +I+RDLKPEN+LIDQ+ ++++ DFG A + GT ++A
Sbjct: 149 QIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFA--KRVKGRTWXLAGTPEYLA 206
Query: 352 PEMIKHKSYGRKVDVYSFGLILWEMVAGTIPYEEMNPIQAAFAVVNKNLR 401
PE+I K Y + VD ++ G++++EM AG P+ PIQ +V+ +R
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR 256
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 83/310 (26%), Positives = 137/310 (44%), Gaps = 61/310 (19%)
Query: 180 QLFLGLRFAHGAHSRLYHGIYKDEPVAVKIIRIPDDDENETLAARLEKQFNREVALLSR- 238
Q+ + + G + ++ G ++ E VAVK+ + E + RE +
Sbjct: 38 QIQMVKQIGKGRYGEVWMGKWRGEKVAVKVFFTTE-----------EASWFRETEIYQTV 86
Query: 239 -LHNPNVIKFVAACKK-----PPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIALD 292
+ + N++ F+AA K +Y +IT+Y GSL YL + TL ++ +A
Sbjct: 87 LMRHENILGFIAADIKGTGSWTQLY-LITDYHENGSLYDYL---KSTTLDAKSMLKLAYS 142
Query: 293 IARGMEYIHSQ--------GVIHRDLKPENVLIDQEFHLKIADFGIACEEVYCDALSDDP 344
G+ ++H++ + HRDLK +N+L+ + IAD G+A + + D P
Sbjct: 143 SVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKFISDTNEVDIP 202
Query: 345 -----GTYRWMAPEMI------KHKSYGRKVDVYSFGLILWEM----VAGTI------PY 383
GT R+M PE++ H D+YSFGLILWE+ V+G I PY
Sbjct: 203 PNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQLPY 262
Query: 384 EEMNPIQAAFA-----VVNKNLRPAIPG-----DCPPAMAALIEQCWSLQPDKRPEFWHI 433
++ P ++ V K LRP+ P +C M L+ +CW+ P R +
Sbjct: 263 HDLVPSDPSYEDMREIVCIKKLRPSFPNRWSSDECLRQMGKLMTECWAHNPASRLTALRV 322
Query: 434 VKVLEQFETS 443
K L + S
Sbjct: 323 KKTLAKMSES 332
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 94/175 (53%), Gaps = 14/175 (8%)
Query: 232 EVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIAL 291
E +L ++ P ++K + K ++ EY++ G + ++L ++ + P + A
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAA-- 148
Query: 292 DIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIACEE-----VYCDALSDDPGT 346
I EY+HS +I+RDLKPEN+LIDQ+ ++++ DFG A C GT
Sbjct: 149 QIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-------GT 201
Query: 347 YRWMAPEMIKHKSYGRKVDVYSFGLILWEMVAGTIPYEEMNPIQAAFAVVNKNLR 401
++APE+I K Y + VD ++ G++++EM AG P+ PIQ +V+ +R
Sbjct: 202 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR 256
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 69/248 (27%), Positives = 121/248 (48%), Gaps = 18/248 (7%)
Query: 208 KIIRIPDDDENETLAARL-----------EKQFNREVALLSRLHNPNVIKFVAACKKPPV 256
K I D D E A ++ +++ + E+A+ L NP+V+ F +
Sbjct: 57 KCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHGFFEDDDF 116
Query: 257 YCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIALDIARGMEYIHSQGVIHRDLKPENVL 316
V+ E SL LHK K + P+ +G++Y+H+ VIHRDLK N+
Sbjct: 117 VYVVLEICRRRSLLE-LHK-RRKAVTEPEARYFMRQTIQGVQYLHNNRVIHRDLKLGNLF 174
Query: 317 IDQEFHLKIADFGIACE-EVYCDALSDDPGTYRWMAPEMIKHKSYGRKVDVYSFGLILWE 375
++ + +KI DFG+A + E + D GT ++APE++ K + +VD++S G IL+
Sbjct: 175 LNDDMDVKIGDFGLATKIEFDGERKKDLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYT 234
Query: 376 MVAGTIPYEEMNPIQAAFAVVNKNLRPAIPGDCPPAMAALIEQCWSLQPDKRPEFWHIVK 435
++ G P+ E + ++ + + KN ++P P +ALI + P RP ++
Sbjct: 235 LLVGKPPF-ETSCLKETYIRIKKN-EYSVPRHINPVASALIRRMLHADPTLRPSVAELLT 292
Query: 436 VLEQFETS 443
++F TS
Sbjct: 293 --DEFFTS 298
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 110/206 (53%), Gaps = 11/206 (5%)
Query: 231 REVALLSRLH-NPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAI 289
+EV +L ++ +PN+I+ + + ++ + + +G L YL E TL + I
Sbjct: 59 KEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYL--TEKVTLSEKETRKI 116
Query: 290 ALDIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIACEEVYCDALSDDPGTYRW 349
+ + +H ++HRDLKPEN+L+D + ++K+ DFG +C+ + L + GT +
Sbjct: 117 MRALLEVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLREVCGTPSY 176
Query: 350 MAPEMIK------HKSYGRKVDVYSFGLILWEMVAGTIPYEEMNPIQAAFAVVNKNLRPA 403
+APE+I+ H YG++VD++S G+I++ ++AG+ P+ + +++ N +
Sbjct: 177 LAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFG 236
Query: 404 IP--GDCPPAMAALIEQCWSLQPDKR 427
P D + L+ + +QP KR
Sbjct: 237 SPEWDDYSDTVKDLVSRFLVVQPQKR 262
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 99/198 (50%), Gaps = 7/198 (3%)
Query: 232 EVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIAL 291
E +L +P + A + C + EY + G L + H + +
Sbjct: 55 ESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGEL--FFHLSRERVFTEERARFYGA 112
Query: 292 DIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIACEEVYCDA--LSDDPGTYRW 349
+I +EY+HS+ V++RD+K EN+++D++ H+KI DFG+ C+E D + GT +
Sbjct: 113 EIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGL-CKEGISDGATMKXFCGTPEY 171
Query: 350 MAPEMIKHKSYGRKVDVYSFGLILWEMVAGTIPYEEMNPIQAAFAVVNKNLRPAIPGDCP 409
+APE+++ YGR VD + G++++EM+ G +P+ + + ++ + +R P
Sbjct: 172 LAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIR--FPRTLS 229
Query: 410 PAMAALIEQCWSLQPDKR 427
P +L+ P +R
Sbjct: 230 PEAKSLLAGLLKKDPKQR 247
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 94/175 (53%), Gaps = 14/175 (8%)
Query: 232 EVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIAL 291
E +L ++ P ++K + K ++ EY++ G + ++L ++ + P + A
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAA-- 148
Query: 292 DIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIACEE-----VYCDALSDDPGT 346
I EY+HS +I+RDLKPEN+LIDQ+ ++++ DFG A C GT
Sbjct: 149 QIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-------GT 201
Query: 347 YRWMAPEMIKHKSYGRKVDVYSFGLILWEMVAGTIPYEEMNPIQAAFAVVNKNLR 401
++APE+I K Y + VD ++ G++++EM AG P+ PIQ +V+ +R
Sbjct: 202 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR 256
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 94/175 (53%), Gaps = 14/175 (8%)
Query: 232 EVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIAL 291
E +L ++ P ++K + K ++ EY++ G + ++L ++ + P + A
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAA-- 148
Query: 292 DIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIACEE-----VYCDALSDDPGT 346
I EY+HS +I+RDLKPEN+LIDQ+ ++++ DFG A C GT
Sbjct: 149 QIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-------GT 201
Query: 347 YRWMAPEMIKHKSYGRKVDVYSFGLILWEMVAGTIPYEEMNPIQAAFAVVNKNLR 401
++APE+I K Y + VD ++ G++++EM AG P+ PIQ +V+ +R
Sbjct: 202 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR 256
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 68/239 (28%), Positives = 121/239 (50%), Gaps = 21/239 (8%)
Query: 203 EPVAVKIIRIPDDDENETLAAR--LEKQFNREVALLSRLHNPNVIKFVAACKKPPVYCVI 260
+ VA+KII N+ + A+ ++ + RE++ L L +P++IK K ++
Sbjct: 34 QKVALKII-------NKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMV 86
Query: 261 TEYLSEGSLRAYLHKLEHKTLPLPKLIAIALDIARGMEYIHSQGVIHRDLKPENVLIDQE 320
EY + L Y+ ++ + + I +EY H ++HRDLKPEN+L+D+
Sbjct: 87 IEY-AGNELFDYI--VQRDKMSEQEARRFFQQIISAVEYCHRHKIVHRDLKPENLLLDEH 143
Query: 321 FHLKIADFGIACEEVYCDALSDDPGTYRWMAPEMIKHKSY-GRKVDVYSFGLILWEMVAG 379
++KIADFG++ + L G+ + APE+I K Y G +VDV+S G+IL+ M+
Sbjct: 144 LNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCR 203
Query: 380 TIPYEEMNPIQAAFAVVNKNLRPAI---PGDCPPAMAALIEQCWSLQPDKRPEFWHIVK 435
+P+++ + V+ KN+ + P P A LI++ + P R I++
Sbjct: 204 RLPFDD-----ESIPVLFKNISNGVYTLPKFLSPGAAGLIKRMLIVNPLNRISIHEIMQ 257
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 99/198 (50%), Gaps = 7/198 (3%)
Query: 232 EVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIAL 291
E +L +P + A + C + EY + G L + H + +
Sbjct: 55 ESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGEL--FFHLSRERVFTEERARFYGA 112
Query: 292 DIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIACEEVYCDALSDDP--GTYRW 349
+I +EY+HS+ V++RD+K EN+++D++ H+KI DFG+ C+E D + GT +
Sbjct: 113 EIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGL-CKEGISDGATMKTFCGTPEY 171
Query: 350 MAPEMIKHKSYGRKVDVYSFGLILWEMVAGTIPYEEMNPIQAAFAVVNKNLRPAIPGDCP 409
+APE+++ YGR VD + G++++EM+ G +P+ + + ++ + +R P
Sbjct: 172 LAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIR--FPRTLS 229
Query: 410 PAMAALIEQCWSLQPDKR 427
P +L+ P +R
Sbjct: 230 PEAKSLLAGLLKKDPKQR 247
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 68/239 (28%), Positives = 121/239 (50%), Gaps = 21/239 (8%)
Query: 203 EPVAVKIIRIPDDDENETLAAR--LEKQFNREVALLSRLHNPNVIKFVAACKKPPVYCVI 260
+ VA+KII N+ + A+ ++ + RE++ L L +P++IK K ++
Sbjct: 30 QKVALKII-------NKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMV 82
Query: 261 TEYLSEGSLRAYLHKLEHKTLPLPKLIAIALDIARGMEYIHSQGVIHRDLKPENVLIDQE 320
EY + L Y+ ++ + + I +EY H ++HRDLKPEN+L+D+
Sbjct: 83 IEY-AGNELFDYI--VQRDKMSEQEARRFFQQIISAVEYCHRHKIVHRDLKPENLLLDEH 139
Query: 321 FHLKIADFGIACEEVYCDALSDDPGTYRWMAPEMIKHKSY-GRKVDVYSFGLILWEMVAG 379
++KIADFG++ + L G+ + APE+I K Y G +VDV+S G+IL+ M+
Sbjct: 140 LNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCR 199
Query: 380 TIPYEEMNPIQAAFAVVNKNLRPAI---PGDCPPAMAALIEQCWSLQPDKRPEFWHIVK 435
+P+++ + V+ KN+ + P P A LI++ + P R I++
Sbjct: 200 RLPFDD-----ESIPVLFKNISNGVYTLPKFLSPGAAGLIKRMLIVNPLNRISIHEIMQ 253
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 101/196 (51%), Gaps = 6/196 (3%)
Query: 232 EVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIAL 291
E +L ++ P ++K + K ++ EY++ G + ++L ++ + P + A
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAA-- 148
Query: 292 DIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIACEEVYCDALSDDPGTYRWMA 351
I EY+HS +I+RDLKPEN+LIDQ+ ++++ DFG A + GT ++A
Sbjct: 149 QIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFA--KRVKGRTWXLXGTPEYLA 206
Query: 352 PEMIKHKSYGRKVDVYSFGLILWEMVAGTIPYEEMNPIQAAFAVVNKNLRPAIPGDCPPA 411
PE+I K Y + VD ++ G++++EM AG P+ PIQ +V+ +R P
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR--FPSHFSSD 264
Query: 412 MAALIEQCWSLQPDKR 427
+ L+ + KR
Sbjct: 265 LKDLLRNLLQVDLTKR 280
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 94/175 (53%), Gaps = 14/175 (8%)
Query: 232 EVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIAL 291
E +L ++ P ++K + K ++ EY++ G + ++L ++ + P + A
Sbjct: 92 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAA-- 149
Query: 292 DIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIACEE-----VYCDALSDDPGT 346
I EY+HS +I+RDLKPEN+LIDQ+ ++++ DFG A C GT
Sbjct: 150 QIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-------GT 202
Query: 347 YRWMAPEMIKHKSYGRKVDVYSFGLILWEMVAGTIPYEEMNPIQAAFAVVNKNLR 401
++APE+I K Y + VD ++ G++++EM AG P+ PIQ +V+ +R
Sbjct: 203 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR 257
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 109/206 (52%), Gaps = 11/206 (5%)
Query: 231 REVALLSRLH-NPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAI 289
+EV +L ++ +PN+I+ + + ++ + + +G L YL E TL + I
Sbjct: 72 KEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYL--TEKVTLSEKETRKI 129
Query: 290 ALDIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIACEEVYCDALSDDPGTYRW 349
+ + +H ++HRDLKPEN+L+D + ++K+ DFG +C+ + L GT +
Sbjct: 130 MRALLEVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLRSVCGTPSY 189
Query: 350 MAPEMIK------HKSYGRKVDVYSFGLILWEMVAGTIPYEEMNPIQAAFAVVNKNLRPA 403
+APE+I+ H YG++VD++S G+I++ ++AG+ P+ + +++ N +
Sbjct: 190 LAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFG 249
Query: 404 IP--GDCPPAMAALIEQCWSLQPDKR 427
P D + L+ + +QP KR
Sbjct: 250 SPEWDDYSDTVKDLVSRFLVVQPQKR 275
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 68/264 (25%), Positives = 125/264 (47%), Gaps = 26/264 (9%)
Query: 188 AHGAHSRLYHG--IYKDEPVAVKIIRIPDDDENETLAARLEKQFNREVALLSRL-HNPNV 244
+G + ++Y G + + A+K++ + D+E E +E+ +L + H+ N+
Sbjct: 33 GNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEE---------IKQEINMLKKYSHHRNI 83
Query: 245 IKFVAAC--KKPP----VYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIALDIARGME 298
+ A K PP ++ E+ GS+ + + TL + I +I RG+
Sbjct: 84 ATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLS 143
Query: 299 YIHSQGVIHRDLKPENVLIDQEFHLKIADFGIACE-EVYCDALSDDPGTYRWMAPEMIK- 356
++H VIHRD+K +NVL+ + +K+ DFG++ + + + GT WMAPE+I
Sbjct: 144 HLHQHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGRRNTFIGTPYWMAPEVIAC 203
Query: 357 ----HKSYGRKVDVYSFGLILWEMVAGTIPYEEMNPIQAAFAVVNKNLRPAIPG-DCPPA 411
+Y K D++S G+ EM G P +M+P++A F ++ +N P +
Sbjct: 204 DENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALF-LIPRNPAPRLKSKKWSKK 262
Query: 412 MAALIEQCWSLQPDKRPEFWHIVK 435
+ IE C +RP ++K
Sbjct: 263 FQSFIESCLVKNHSQRPATEQLMK 286
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 94/175 (53%), Gaps = 14/175 (8%)
Query: 232 EVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIAL 291
E +L ++ P ++K + K ++ EY++ G + ++L ++ + P + A
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAA-- 148
Query: 292 DIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIACEE-----VYCDALSDDPGT 346
I EY+HS +I+RDLKPEN+LIDQ+ ++++ DFG A C GT
Sbjct: 149 QIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-------GT 201
Query: 347 YRWMAPEMIKHKSYGRKVDVYSFGLILWEMVAGTIPYEEMNPIQAAFAVVNKNLR 401
++APE+I K Y + VD ++ G++++EM AG P+ PIQ +V+ +R
Sbjct: 202 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR 256
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 99/198 (50%), Gaps = 7/198 (3%)
Query: 232 EVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIAL 291
E +L +P + A + C + EY + G L + H + +
Sbjct: 55 ESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGEL--FFHLSRERVFTEERARFYGA 112
Query: 292 DIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIACEEVYCDA--LSDDPGTYRW 349
+I +EY+HS+ V++RD+K EN+++D++ H+KI DFG+ C+E D + GT +
Sbjct: 113 EIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGL-CKEGISDGATMKXFCGTPEY 171
Query: 350 MAPEMIKHKSYGRKVDVYSFGLILWEMVAGTIPYEEMNPIQAAFAVVNKNLRPAIPGDCP 409
+APE+++ YGR VD + G++++EM+ G +P+ + + ++ + +R P
Sbjct: 172 LAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIR--FPRTLS 229
Query: 410 PAMAALIEQCWSLQPDKR 427
P +L+ P +R
Sbjct: 230 PEAKSLLAGLLKKDPKQR 247
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 94/175 (53%), Gaps = 14/175 (8%)
Query: 232 EVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIAL 291
E +L ++ P ++K + K ++ EY++ G + ++L ++ + P + A
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAA-- 148
Query: 292 DIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIACEE-----VYCDALSDDPGT 346
I EY+HS +I+RDLKPEN+LIDQ+ ++++ DFG A C GT
Sbjct: 149 QIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-------GT 201
Query: 347 YRWMAPEMIKHKSYGRKVDVYSFGLILWEMVAGTIPYEEMNPIQAAFAVVNKNLR 401
++APE+I K Y + VD ++ G++++EM AG P+ PIQ +V+ +R
Sbjct: 202 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR 256
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 98/201 (48%), Gaps = 7/201 (3%)
Query: 230 NREVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAI 289
RE ++SRL +P +K + Y G L Y+ K+ +
Sbjct: 80 TRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTA 139
Query: 290 ALDIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIA---CEEVYCDALSDDPGT 346
+I +EY+H +G+IHRDLKPEN+L++++ H++I DFG A E + GT
Sbjct: 140 --EIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 197
Query: 347 YRWMAPEMIKHKSYGRKVDVYSFGLILWEMVAGTIPYEEMNPIQAAFAVVNKNLRPAIPG 406
++++PE++ KS + D+++ G I++++VAG P+ N FA + K L P
Sbjct: 198 AQYVSPELLTEKSAXKSSDLWALGCIIYQLVAGLPPFRAGNE-GLIFAKIIK-LEYDFPE 255
Query: 407 DCPPAMAALIEQCWSLQPDKR 427
P L+E+ L KR
Sbjct: 256 KFFPKARDLVEKLLVLDATKR 276
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 99/198 (50%), Gaps = 7/198 (3%)
Query: 232 EVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIAL 291
E +L +P + A + C + EY + G L + H + +
Sbjct: 60 ESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGEL--FFHLSRERVFTEERARFYGA 117
Query: 292 DIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIACEEVYCDA--LSDDPGTYRW 349
+I +EY+HS+ V++RD+K EN+++D++ H+KI DFG+ C+E D + GT +
Sbjct: 118 EIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGL-CKEGISDGATMKXFCGTPEY 176
Query: 350 MAPEMIKHKSYGRKVDVYSFGLILWEMVAGTIPYEEMNPIQAAFAVVNKNLRPAIPGDCP 409
+APE+++ YGR VD + G++++EM+ G +P+ + + ++ + +R P
Sbjct: 177 LAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIR--FPRTLS 234
Query: 410 PAMAALIEQCWSLQPDKR 427
P +L+ P +R
Sbjct: 235 PEAKSLLAGLLKKDPKQR 252
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 94/175 (53%), Gaps = 14/175 (8%)
Query: 232 EVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIAL 291
E +L ++ P ++K + K ++ EY++ G + ++L ++ + P + A
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAA-- 148
Query: 292 DIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIACEE-----VYCDALSDDPGT 346
I EY+HS +I+RDLKPEN+LIDQ+ ++++ DFG A C GT
Sbjct: 149 QIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-------GT 201
Query: 347 YRWMAPEMIKHKSYGRKVDVYSFGLILWEMVAGTIPYEEMNPIQAAFAVVNKNLR 401
++APE+I K Y + VD ++ G++++EM AG P+ PIQ +V+ +R
Sbjct: 202 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADEPIQIYEKIVSGKVR 256
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 108/213 (50%), Gaps = 25/213 (11%)
Query: 186 RFAHGAHSRLYHGIYKD--EPVAVKIIRIPDDDENETLAARLEKQFNREVALLSRLHNPN 243
R G + I++D E VA+K R + L+ + +++ E+ ++ +L++PN
Sbjct: 22 RLGTGGFGYVLRWIHQDTGEQVAIKQCR-------QELSPKNRERWCLEIQIMKKLNHPN 74
Query: 244 VIKF------VAACKKPPVYCVITEYLSEGSLRAYLHKLEH----KTLPLPKLIAIALDI 293
V+ + + + EY G LR YL++ E+ K P+ L++ DI
Sbjct: 75 VVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLS---DI 131
Query: 294 ARGMEYIHSQGVIHRDLKPENVLID---QEFHLKIADFGIACEEVYCDALSDDPGTYRWM 350
+ + Y+H +IHRDLKPEN+++ Q KI D G A E + ++ GT +++
Sbjct: 132 SSALRYLHENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCTEFVGTLQYL 191
Query: 351 APEMIKHKSYGRKVDVYSFGLILWEMVAGTIPY 383
APE+++ K Y VD +SFG + +E + G P+
Sbjct: 192 APELLEQKKYTVTVDYWSFGTLAFECITGFRPF 224
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 108/213 (50%), Gaps = 25/213 (11%)
Query: 186 RFAHGAHSRLYHGIYKD--EPVAVKIIRIPDDDENETLAARLEKQFNREVALLSRLHNPN 243
R G + I++D E VA+K R + L+ + +++ E+ ++ +L++PN
Sbjct: 21 RLGTGGFGYVLRWIHQDTGEQVAIKQCR-------QELSPKNRERWCLEIQIMKKLNHPN 73
Query: 244 VIKF------VAACKKPPVYCVITEYLSEGSLRAYLHKLEH----KTLPLPKLIAIALDI 293
V+ + + + EY G LR YL++ E+ K P+ L++ DI
Sbjct: 74 VVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLS---DI 130
Query: 294 ARGMEYIHSQGVIHRDLKPENVLID---QEFHLKIADFGIACEEVYCDALSDDPGTYRWM 350
+ + Y+H +IHRDLKPEN+++ Q KI D G A E + ++ GT +++
Sbjct: 131 SSALRYLHENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCTEFVGTLQYL 190
Query: 351 APEMIKHKSYGRKVDVYSFGLILWEMVAGTIPY 383
APE+++ K Y VD +SFG + +E + G P+
Sbjct: 191 APELLEQKKYTVTVDYWSFGTLAFECITGFRPF 223
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/250 (26%), Positives = 121/250 (48%), Gaps = 30/250 (12%)
Query: 201 KDEPVAVKIIRIPDDDENETLAARLEKQFNREVALLSRLHNPNVIKFVAACKKPPVYCVI 260
K E VA+K I + E ++ + +E+ +S+ H+PN++ + + ++
Sbjct: 39 KKEKVAIKRINL------EKCQTSMD-ELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLV 91
Query: 261 TEYLSEGS----LRAYLHKLEHKT--LPLPKLIAIALDIARGMEYIHSQGVIHRDLKPEN 314
+ LS GS ++ + K EHK+ L + I ++ G+EY+H G IHRD+K N
Sbjct: 92 MKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQIHRDVKAGN 151
Query: 315 VLIDQEFHLKIADFGIACEEVYCDALSDDP------GTYRWMAPEMIKH-KSYGRKVDVY 367
+L+ ++ ++IADFG++ ++ + GT WMAPE+++ + Y K D++
Sbjct: 152 ILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIW 211
Query: 368 SFGLILWEMVAGTIPYEEMNPIQAAFAVVNKNLRPAIPGDCP---------PAMAALIEQ 418
SFG+ E+ G PY + P++ + +N P++ + +I
Sbjct: 212 SFGITAIELATGAAPYHKYPPMKVLMLTL-QNDPPSLETGVQDKEMLKKYGKSFRKMISL 270
Query: 419 CWSLQPDKRP 428
C P+KRP
Sbjct: 271 CLQKDPEKRP 280
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 59/180 (32%), Positives = 93/180 (51%), Gaps = 12/180 (6%)
Query: 205 VAVKIIRIPDDDENETLAARLEKQFNREVALLSRLH---NPNVIKFVAACKKPPV----- 256
VA+K +R+P+ L REVALL RL +PNV++ + C
Sbjct: 37 VALKSVRVPN---GGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCATSRTDREIK 93
Query: 257 YCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIALDIARGMEYIHSQGVIHRDLKPENVL 316
++ E++ + LR YL K LP + + RG++++H+ ++HRDLKPEN+L
Sbjct: 94 VTLVFEHVDQ-DLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENIL 152
Query: 317 IDQEFHLKIADFGIACEEVYCDALSDDPGTYRWMAPEMIKHKSYGRKVDVYSFGLILWEM 376
+ +K+ADFG+A Y AL+ T + APE++ +Y VD++S G I EM
Sbjct: 153 VTSGGTVKLADFGLARIYSYQMALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEM 212
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/213 (30%), Positives = 107/213 (50%), Gaps = 34/213 (15%)
Query: 205 VAVKIIRIPDDDENETLAARLEKQFNREVALLSRLHNPNVIKFVAACKKPPVYCVITEYL 264
VAVK++ + E L FN EV ++ + NV++ + V+ E+L
Sbjct: 73 VAVKMMDLRKQQRRELL-------FN-EVVIMRDYQHFNVVEMYKSYLVGEELWVLMEFL 124
Query: 265 SEGSLRAYLHKLEHKTLPLPKLIAIALDIARGMEYIHSQGVIHRDLKPENVLIDQEFHLK 324
G+L + ++ L ++ + + + + Y+H+QGVIHRD+K +++L+ + +K
Sbjct: 125 QGGALTDIVSQVR---LNEEQIATVCEAVLQALAYLHAQGVIHRDIKSDSILLTLDGRVK 181
Query: 325 IADFGIACEEVYCDALSDDP-------GTYRWMAPEMIKHKSYGRKVDVYSFGLILWEMV 377
++DFG +C +S D GT WMAPE+I Y +VD++S G+++ EMV
Sbjct: 182 LSDFG------FCAQISKDVPKRKXLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMV 235
Query: 378 AGTIPYEEMNPIQAAFAVVNKNLRPAIPGDCPP 410
G PY +P+QA K LR D PP
Sbjct: 236 DGEPPYFSDSPVQAM-----KRLR-----DSPP 258
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 93/175 (53%), Gaps = 14/175 (8%)
Query: 232 EVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIAL 291
E +L ++ P ++K + K ++ EY++ G + ++L ++ P + A
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFAEPHARFYAA-- 148
Query: 292 DIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIACEE-----VYCDALSDDPGT 346
I EY+HS +I+RDLKPEN+LIDQ+ ++++ DFG A C GT
Sbjct: 149 QIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-------GT 201
Query: 347 YRWMAPEMIKHKSYGRKVDVYSFGLILWEMVAGTIPYEEMNPIQAAFAVVNKNLR 401
++APE+I K Y + VD ++ G++++EM AG P+ PIQ +V+ +R
Sbjct: 202 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR 256
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/250 (26%), Positives = 121/250 (48%), Gaps = 30/250 (12%)
Query: 201 KDEPVAVKIIRIPDDDENETLAARLEKQFNREVALLSRLHNPNVIKFVAACKKPPVYCVI 260
K E VA+K I + E ++ + +E+ +S+ H+PN++ + + ++
Sbjct: 34 KKEKVAIKRINL------EKCQTSMD-ELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLV 86
Query: 261 TEYLSEGS----LRAYLHKLEHKT--LPLPKLIAIALDIARGMEYIHSQGVIHRDLKPEN 314
+ LS GS ++ + K EHK+ L + I ++ G+EY+H G IHRD+K N
Sbjct: 87 MKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQIHRDVKAGN 146
Query: 315 VLIDQEFHLKIADFGIACEEVYCDALSDDP------GTYRWMAPEMIKH-KSYGRKVDVY 367
+L+ ++ ++IADFG++ ++ + GT WMAPE+++ + Y K D++
Sbjct: 147 ILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIW 206
Query: 368 SFGLILWEMVAGTIPYEEMNPIQAAFAVVNKNLRPAIPGDCP---------PAMAALIEQ 418
SFG+ E+ G PY + P++ + +N P++ + +I
Sbjct: 207 SFGITAIELATGAAPYHKYPPMKVLMLTL-QNDPPSLETGVQDKEMLKKYGKSFRKMISL 265
Query: 419 CWSLQPDKRP 428
C P+KRP
Sbjct: 266 CLQKDPEKRP 275
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 98/201 (48%), Gaps = 7/201 (3%)
Query: 230 NREVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAI 289
RE ++SRL +P +K + Y G L Y+ K+ +
Sbjct: 80 TRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTA 139
Query: 290 ALDIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIA---CEEVYCDALSDDPGT 346
+I +EY+H +G+IHRDLKPEN+L++++ H++I DFG A E + GT
Sbjct: 140 --EIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 197
Query: 347 YRWMAPEMIKHKSYGRKVDVYSFGLILWEMVAGTIPYEEMNPIQAAFAVVNKNLRPAIPG 406
++++PE++ KS + D+++ G I++++VAG P+ N FA + K L P
Sbjct: 198 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNE-GLIFAKIIK-LEYDFPE 255
Query: 407 DCPPAMAALIEQCWSLQPDKR 427
P L+E+ L KR
Sbjct: 256 KFFPKARDLVEKLLVLDATKR 276
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 93/175 (53%), Gaps = 14/175 (8%)
Query: 232 EVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIAL 291
E +L ++ P ++K + K ++ EY++ G + ++L ++ P + A
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAA-- 148
Query: 292 DIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIACEE-----VYCDALSDDPGT 346
I EY+HS +I+RDLKPEN+LIDQ+ ++++ DFG A C GT
Sbjct: 149 QIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-------GT 201
Query: 347 YRWMAPEMIKHKSYGRKVDVYSFGLILWEMVAGTIPYEEMNPIQAAFAVVNKNLR 401
++APE+I K Y + VD ++ G++++EM AG P+ PIQ +V+ +R
Sbjct: 202 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR 256
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 98/204 (48%), Gaps = 13/204 (6%)
Query: 230 NREVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAI 289
RE ++SRL +P +K + Y G L Y+ K+ +
Sbjct: 78 TRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTA 137
Query: 290 ALDIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIA------CEEVYCDALSDD 343
+I +EY+H +G+IHRDLKPEN+L++++ H++I DFG A ++ +A
Sbjct: 138 --EIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANAFV-- 193
Query: 344 PGTYRWMAPEMIKHKSYGRKVDVYSFGLILWEMVAGTIPYEEMNPIQAAFAVVNKNLRPA 403
GT ++++PE++ KS + D+++ G I++++VAG P+ N ++ L
Sbjct: 194 -GTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKII--KLEYD 250
Query: 404 IPGDCPPAMAALIEQCWSLQPDKR 427
P P L+E+ L KR
Sbjct: 251 FPEKFFPKARDLVEKLLVLDATKR 274
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 93/175 (53%), Gaps = 14/175 (8%)
Query: 232 EVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIAL 291
E +L ++ P ++K + K ++ EY++ G + ++L ++ P + A
Sbjct: 112 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAA-- 169
Query: 292 DIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIACEE-----VYCDALSDDPGT 346
I EY+HS +I+RDLKPEN+LIDQ+ ++++ DFG A C GT
Sbjct: 170 QIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-------GT 222
Query: 347 YRWMAPEMIKHKSYGRKVDVYSFGLILWEMVAGTIPYEEMNPIQAAFAVVNKNLR 401
++APE+I K Y + VD ++ G++++EM AG P+ PIQ +V+ +R
Sbjct: 223 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR 277
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 93/175 (53%), Gaps = 14/175 (8%)
Query: 232 EVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIAL 291
E +L ++ P ++K + K ++ EY++ G + ++L ++ P + A
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAA-- 148
Query: 292 DIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIACEE-----VYCDALSDDPGT 346
I EY+HS +I+RDLKPEN+LIDQ+ ++++ DFG A C GT
Sbjct: 149 QIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-------GT 201
Query: 347 YRWMAPEMIKHKSYGRKVDVYSFGLILWEMVAGTIPYEEMNPIQAAFAVVNKNLR 401
++APE+I K Y + VD ++ G++++EM AG P+ PIQ +V+ +R
Sbjct: 202 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR 256
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 53/175 (30%), Positives = 94/175 (53%), Gaps = 14/175 (8%)
Query: 232 EVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIAL 291
E +L ++ P ++K + K ++ EY++ G + ++L ++ + P + A
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAA-- 148
Query: 292 DIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIACEE-----VYCDALSDDPGT 346
I EY+HS +I+RDLKPEN++IDQ+ ++++ DFG A C GT
Sbjct: 149 QIVLTFEYLHSLDLIYRDLKPENLIIDQQGYIQVTDFGFAKRVKGRTWXLC-------GT 201
Query: 347 YRWMAPEMIKHKSYGRKVDVYSFGLILWEMVAGTIPYEEMNPIQAAFAVVNKNLR 401
++APE+I K Y + VD ++ G++++EM AG P+ PIQ +V+ +R
Sbjct: 202 PEYLAPEIIISKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR 256
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 93/175 (53%), Gaps = 14/175 (8%)
Query: 232 EVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIAL 291
E +L ++ P ++K + K ++ EY++ G + ++L ++ P + A
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAA-- 148
Query: 292 DIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIACEE-----VYCDALSDDPGT 346
I EY+HS +I+RDLKPEN+LIDQ+ ++++ DFG A C GT
Sbjct: 149 QIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-------GT 201
Query: 347 YRWMAPEMIKHKSYGRKVDVYSFGLILWEMVAGTIPYEEMNPIQAAFAVVNKNLR 401
++APE+I K Y + VD ++ G++++EM AG P+ PIQ +V+ +R
Sbjct: 202 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR 256
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 93/175 (53%), Gaps = 14/175 (8%)
Query: 232 EVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIAL 291
E +L ++ P ++K + K ++ EY+ G + ++L ++ + P + A
Sbjct: 92 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAA-- 149
Query: 292 DIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIACEE-----VYCDALSDDPGT 346
I EY+HS +I+RDLKPEN+LIDQ+ ++++ DFG A C GT
Sbjct: 150 QIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWTLC-------GT 202
Query: 347 YRWMAPEMIKHKSYGRKVDVYSFGLILWEMVAGTIPYEEMNPIQAAFAVVNKNLR 401
++APE+I K Y + VD ++ G++++EM AG P+ PIQ +V+ +R
Sbjct: 203 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR 257
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 93/175 (53%), Gaps = 14/175 (8%)
Query: 232 EVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIAL 291
E +L ++ P ++K + K ++ EY++ G + ++L ++ P + A
Sbjct: 86 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAA-- 143
Query: 292 DIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIACEE-----VYCDALSDDPGT 346
I EY+HS +I+RDLKPEN+LIDQ+ ++++ DFG A C GT
Sbjct: 144 QIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-------GT 196
Query: 347 YRWMAPEMIKHKSYGRKVDVYSFGLILWEMVAGTIPYEEMNPIQAAFAVVNKNLR 401
++APE+I K Y + VD ++ G++++EM AG P+ PIQ +V+ +R
Sbjct: 197 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR 251
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 96/201 (47%), Gaps = 7/201 (3%)
Query: 230 NREVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAI 289
RE ++SRL +P +K + Y G L Y+ K+ +
Sbjct: 80 TRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGCLLKYIRKIGSFDETCTRFYTA 139
Query: 290 ALDIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIA---CEEVYCDALSDDPGT 346
+I +EY+H +G+IHRDLKPEN+L++++ H++I DFG A E + GT
Sbjct: 140 --EIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGT 197
Query: 347 YRWMAPEMIKHKSYGRKVDVYSFGLILWEMVAGTIPYEEMNPIQAAFAVVNKNLRPAIPG 406
++++PE++ KS + D+++ G I++++VAG P+ N ++ L P
Sbjct: 198 AQYVSPELLTEKSASKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKII--KLEYDFPE 255
Query: 407 DCPPAMAALIEQCWSLQPDKR 427
P L+E+ L KR
Sbjct: 256 KFFPKARDLVEKLLVLDATKR 276
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 93/175 (53%), Gaps = 14/175 (8%)
Query: 232 EVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIAL 291
E +L ++ P ++K + K ++ EY+ G + ++L ++ + P + A
Sbjct: 77 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAA-- 134
Query: 292 DIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIACEE-----VYCDALSDDPGT 346
I EY+HS +I+RDLKPEN+LIDQ+ ++++ DFG A C GT
Sbjct: 135 QIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWTLC-------GT 187
Query: 347 YRWMAPEMIKHKSYGRKVDVYSFGLILWEMVAGTIPYEEMNPIQAAFAVVNKNLR 401
++APE+I K Y + VD ++ G++++EM AG P+ PIQ +V+ +R
Sbjct: 188 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR 242
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 53/175 (30%), Positives = 94/175 (53%), Gaps = 14/175 (8%)
Query: 232 EVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIAL 291
E +L ++ P ++K + K ++ EY++ G + ++L ++ + P + A
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAA-- 148
Query: 292 DIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIACEE-----VYCDALSDDPGT 346
I EY+HS +I+RDLKPEN+LIDQ+ ++++ DFG A C GT
Sbjct: 149 QIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-------GT 201
Query: 347 YRWMAPEMIKHKSYGRKVDVYSFGLILWEMVAGTIPYEEMNPIQAAFAVVNKNLR 401
++APE+I K Y + VD ++ G+++++M AG P+ PIQ +V+ +R
Sbjct: 202 PEYLAPEIILSKGYNKAVDWWALGVLIYQMAAGYPPFFADQPIQIYEKIVSGKVR 256
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 72/243 (29%), Positives = 120/243 (49%), Gaps = 20/243 (8%)
Query: 191 AHSRLYHGIYKDEPVAVKIIRIPDDDENETLAARLEKQFNREVALLSRLHNPNVIKFVAA 250
A +L I E VA+KI+ D+N TL + L + E+ L L + ++ +
Sbjct: 24 AKVKLACHILTGEMVAIKIM-----DKN-TLGSDLPR-IKTEIEALKNLRHQHICQLYHV 76
Query: 251 CKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIALDIARGMEYIHSQGVIHRDL 310
+ ++ EY G L Y+ + L + + I + Y+HSQG HRDL
Sbjct: 77 LETANKIFMVLEYCPGGELFDYI--ISQDRLSEEETRVVFRQIVSAVAYVHSQGYAHRDL 134
Query: 311 KPENVLIDQEFHLKIADFGIACEEVYCDA---LSDDPGTYRWMAPEMIKHKSY-GRKVDV 366
KPEN+L D+ LK+ DFG+ C + + L G+ + APE+I+ KSY G + DV
Sbjct: 135 KPENLLFDEYHKLKLIDFGL-CAKPKGNKDYHLQTCCGSLAYAAPELIQGKSYLGSEADV 193
Query: 367 YSFGLILWEMVAGTIPYEEMNPIQAAFAVVNKNLRPA--IPGDCPPAMAALIEQCWSLQP 424
+S G++L+ ++ G +P+++ N A+ K +R +P P+ L++Q + P
Sbjct: 194 WSMGILLYVLMCGFLPFDDDN----VMALYKKIMRGKYDVPKWLSPSSILLLQQMLQVDP 249
Query: 425 DKR 427
KR
Sbjct: 250 KKR 252
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 53/162 (32%), Positives = 84/162 (51%), Gaps = 3/162 (1%)
Query: 223 ARLEKQFNREVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLP 282
A +E Q REV + S L +PN+++ +I EY G++ L KL
Sbjct: 53 AGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSR--FD 110
Query: 283 LPKLIAIALDIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIACEEVYCDALSD 342
+ ++A + Y HS+ VIHRD+KPEN+L+ LKIADFG + +
Sbjct: 111 EQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSNGELKIADFGWSVHAP-SSRRTT 169
Query: 343 DPGTYRWMAPEMIKHKSYGRKVDVYSFGLILWEMVAGTIPYE 384
GT ++ PEMI+ + + KVD++S G++ +E + G P+E
Sbjct: 170 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGMPPFE 211
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 93/175 (53%), Gaps = 14/175 (8%)
Query: 232 EVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIAL 291
E +L ++ P ++K + K ++ EY+ G + ++L ++ + P + A
Sbjct: 91 EKRILQAVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAA-- 148
Query: 292 DIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIACEE-----VYCDALSDDPGT 346
I EY+HS +I+RDLKPEN+LIDQ+ ++++ DFG A C GT
Sbjct: 149 QIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-------GT 201
Query: 347 YRWMAPEMIKHKSYGRKVDVYSFGLILWEMVAGTIPYEEMNPIQAAFAVVNKNLR 401
++APE+I K Y + VD ++ G++++EM AG P+ PIQ +V+ +R
Sbjct: 202 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR 256
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 93/175 (53%), Gaps = 14/175 (8%)
Query: 232 EVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIAL 291
E +L ++ P ++K + K ++ EY+ G + ++L ++ + P + A
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAA-- 148
Query: 292 DIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIACEE-----VYCDALSDDPGT 346
I EY+HS +I+RDLKPEN+LIDQ+ ++++ DFG A C GT
Sbjct: 149 QIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-------GT 201
Query: 347 YRWMAPEMIKHKSYGRKVDVYSFGLILWEMVAGTIPYEEMNPIQAAFAVVNKNLR 401
++APE+I K Y + VD ++ G++++EM AG P+ PIQ +V+ +R
Sbjct: 202 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR 256
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 93/175 (53%), Gaps = 14/175 (8%)
Query: 232 EVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIAL 291
E +L ++ P ++K + K ++ EY+ G + ++L ++ + P + A
Sbjct: 91 EKRILQAVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAA-- 148
Query: 292 DIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIACEE-----VYCDALSDDPGT 346
I EY+HS +I+RDLKPEN+LIDQ+ ++++ DFG A C GT
Sbjct: 149 QIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-------GT 201
Query: 347 YRWMAPEMIKHKSYGRKVDVYSFGLILWEMVAGTIPYEEMNPIQAAFAVVNKNLR 401
++APE+I K Y + VD ++ G++++EM AG P+ PIQ +V+ +R
Sbjct: 202 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR 256
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 93/175 (53%), Gaps = 14/175 (8%)
Query: 232 EVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIAL 291
E +L ++ P ++K + K ++ EY+ G + ++L ++ + P + A
Sbjct: 92 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAA-- 149
Query: 292 DIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIACEE-----VYCDALSDDPGT 346
I EY+HS +I+RDLKPEN+LIDQ+ ++++ DFG A C GT
Sbjct: 150 QIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-------GT 202
Query: 347 YRWMAPEMIKHKSYGRKVDVYSFGLILWEMVAGTIPYEEMNPIQAAFAVVNKNLR 401
++APE+I K Y + VD ++ G++++EM AG P+ PIQ +V+ +R
Sbjct: 203 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR 257
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 93/175 (53%), Gaps = 14/175 (8%)
Query: 232 EVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIAL 291
E +L ++ P ++K + K ++ EY+ G + ++L ++ + P + A
Sbjct: 84 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAA-- 141
Query: 292 DIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIACEE-----VYCDALSDDPGT 346
I EY+HS +I+RDLKPEN+LIDQ+ ++++ DFG A C GT
Sbjct: 142 QIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-------GT 194
Query: 347 YRWMAPEMIKHKSYGRKVDVYSFGLILWEMVAGTIPYEEMNPIQAAFAVVNKNLR 401
++APE+I K Y + VD ++ G++++EM AG P+ PIQ +V+ +R
Sbjct: 195 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR 249
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 93/175 (53%), Gaps = 14/175 (8%)
Query: 232 EVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIAL 291
E +L ++ P ++K + K ++ EY+ G + ++L ++ + P + A
Sbjct: 91 EKRILQAVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAA-- 148
Query: 292 DIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIACEE-----VYCDALSDDPGT 346
I EY+HS +I+RDLKPEN+LIDQ+ ++++ DFG A C GT
Sbjct: 149 QIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-------GT 201
Query: 347 YRWMAPEMIKHKSYGRKVDVYSFGLILWEMVAGTIPYEEMNPIQAAFAVVNKNLR 401
++APE+I K Y + VD ++ G++++EM AG P+ PIQ +V+ +R
Sbjct: 202 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR 256
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 93/175 (53%), Gaps = 14/175 (8%)
Query: 232 EVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIAL 291
E +L ++ P ++K + K ++ EY G + ++L ++ + P + A
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAA-- 148
Query: 292 DIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIACEE-----VYCDALSDDPGT 346
I EY+HS +I+RDLKPEN++IDQ+ ++K+ DFG+A C GT
Sbjct: 149 QIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGLAKRVKGRTWXLC-------GT 201
Query: 347 YRWMAPEMIKHKSYGRKVDVYSFGLILWEMVAGTIPYEEMNPIQAAFAVVNKNLR 401
++APE+I K Y + VD ++ G++++EM AG P+ PIQ +V+ +R
Sbjct: 202 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR 256
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 93/175 (53%), Gaps = 14/175 (8%)
Query: 232 EVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIAL 291
E +L ++ P ++K + K ++ EY+ G + ++L ++ + P + A
Sbjct: 92 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAA-- 149
Query: 292 DIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIACEE-----VYCDALSDDPGT 346
I EY+HS +I+RDLKPEN+LIDQ+ ++++ DFG A C GT
Sbjct: 150 QIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-------GT 202
Query: 347 YRWMAPEMIKHKSYGRKVDVYSFGLILWEMVAGTIPYEEMNPIQAAFAVVNKNLR 401
++APE+I K Y + VD ++ G++++EM AG P+ PIQ +V+ +R
Sbjct: 203 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR 257
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 93/175 (53%), Gaps = 14/175 (8%)
Query: 232 EVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIAL 291
E +L ++ P ++K + K ++ EY+ G + ++L ++ + P + A
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAA-- 148
Query: 292 DIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIACEE-----VYCDALSDDPGT 346
I EY+HS +I+RDLKPEN+LIDQ+ ++++ DFG A C GT
Sbjct: 149 QIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-------GT 201
Query: 347 YRWMAPEMIKHKSYGRKVDVYSFGLILWEMVAGTIPYEEMNPIQAAFAVVNKNLR 401
++APE+I K Y + VD ++ G++++EM AG P+ PIQ +V+ +R
Sbjct: 202 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR 256
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 93/175 (53%), Gaps = 14/175 (8%)
Query: 232 EVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIAL 291
E +L ++ P ++K + K ++ EY+ G + ++L ++ + P + A
Sbjct: 92 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAA-- 149
Query: 292 DIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIACEE-----VYCDALSDDPGT 346
I EY+HS +I+RDLKPEN+LIDQ+ ++++ DFG A C GT
Sbjct: 150 QIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-------GT 202
Query: 347 YRWMAPEMIKHKSYGRKVDVYSFGLILWEMVAGTIPYEEMNPIQAAFAVVNKNLR 401
++APE+I K Y + VD ++ G++++EM AG P+ PIQ +V+ +R
Sbjct: 203 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR 257
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 93/175 (53%), Gaps = 14/175 (8%)
Query: 232 EVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIAL 291
E +L ++ P ++K + K ++ EY+ G + ++L ++ + P + A
Sbjct: 112 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAA-- 169
Query: 292 DIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIACEE-----VYCDALSDDPGT 346
I EY+HS +I+RDLKPEN+LIDQ+ ++++ DFG A C GT
Sbjct: 170 QIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-------GT 222
Query: 347 YRWMAPEMIKHKSYGRKVDVYSFGLILWEMVAGTIPYEEMNPIQAAFAVVNKNLR 401
++APE+I K Y + VD ++ G++++EM AG P+ PIQ +V+ +R
Sbjct: 223 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR 277
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 93/175 (53%), Gaps = 14/175 (8%)
Query: 232 EVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIAL 291
E +L ++ P ++K + K ++ EY+ G + ++L ++ + P + A
Sbjct: 92 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAA-- 149
Query: 292 DIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIACEE-----VYCDALSDDPGT 346
I EY+HS +I+RDLKPEN+LIDQ+ ++++ DFG A C GT
Sbjct: 150 QIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-------GT 202
Query: 347 YRWMAPEMIKHKSYGRKVDVYSFGLILWEMVAGTIPYEEMNPIQAAFAVVNKNLR 401
++APE+I K Y + VD ++ G++++EM AG P+ PIQ +V+ +R
Sbjct: 203 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR 257
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 96/201 (47%), Gaps = 7/201 (3%)
Query: 230 NREVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAI 289
RE ++SRL +P +K + Y G L Y+ K+ +
Sbjct: 83 TRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTA 142
Query: 290 ALDIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIA---CEEVYCDALSDDPGT 346
+I +EY+H +G+IHRDLKPEN+L++++ H++I DFG A E + GT
Sbjct: 143 --EIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 200
Query: 347 YRWMAPEMIKHKSYGRKVDVYSFGLILWEMVAGTIPYEEMNPIQAAFAVVNKNLRPAIPG 406
++++PE++ KS + D+++ G I++++VAG P+ N ++ L P
Sbjct: 201 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKII--KLEYDFPA 258
Query: 407 DCPPAMAALIEQCWSLQPDKR 427
P L+E+ L KR
Sbjct: 259 AFFPKARDLVEKLLVLDATKR 279
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 98/206 (47%), Gaps = 15/206 (7%)
Query: 187 FAHGAHSRLYHGIYKDEP-VAVKIIRIPDDDENETLAARLEKQFNREVALLSRLHNPNVI 245
G ++Y G D VAVK ++ E E QF EV ++S + N++
Sbjct: 46 LGRGGFGKVYKGRLADGTLVAVKRLK-------EERXQGGELQFQTEVEMISMAVHRNLL 98
Query: 246 KFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPL--PKLIAIALDIARGMEYIHSQ 303
+ C P ++ Y++ GS+ + L + PL PK IAL ARG+ Y+H
Sbjct: 99 RLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDH 158
Query: 304 ---GVIHRDLKPENVLIDQEFHLKIADFGIACEEVYCDALSDDP--GTYRWMAPEMIKHK 358
+IHRD+K N+L+D+EF + DFG+A Y D GT +APE +
Sbjct: 159 CDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXAVRGTIGHIAPEYLSTG 218
Query: 359 SYGRKVDVYSFGLILWEMVAGTIPYE 384
K DV+ +G++L E++ G ++
Sbjct: 219 KSSEKTDVFGYGVMLLELITGQRAFD 244
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 96/201 (47%), Gaps = 7/201 (3%)
Query: 230 NREVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAI 289
RE ++SRL +P +K + Y G L Y+ K+ +
Sbjct: 77 TRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTA 136
Query: 290 ALDIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIA---CEEVYCDALSDDPGT 346
+I +EY+H +G+IHRDLKPEN+L++++ H++I DFG A E + GT
Sbjct: 137 --EIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGT 194
Query: 347 YRWMAPEMIKHKSYGRKVDVYSFGLILWEMVAGTIPYEEMNPIQAAFAVVNKNLRPAIPG 406
++++PE++ KS + D+++ G I++++VAG P+ N ++ L P
Sbjct: 195 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKII--KLEYDFPE 252
Query: 407 DCPPAMAALIEQCWSLQPDKR 427
P L+E+ L KR
Sbjct: 253 KFFPKARDLVEKLLVLDATKR 273
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 54/165 (32%), Positives = 88/165 (53%), Gaps = 14/165 (8%)
Query: 242 PNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIALDIARGMEYIH 301
P ++K + K ++ EY G + ++L ++ + P + A I EY+H
Sbjct: 102 PFLVKLEFSFKDNSNLYMVLEYAPGGEMFSHLRRIGRFSEPHARFYAA--QIVLTFEYLH 159
Query: 302 SQGVIHRDLKPENVLIDQEFHLKIADFGIACEE-----VYCDALSDDPGTYRWMAPEMIK 356
S +I+RDLKPEN+LIDQ+ ++K+ADFG A C GT ++APE+I
Sbjct: 160 SLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWXLC-------GTPEYLAPEIIL 212
Query: 357 HKSYGRKVDVYSFGLILWEMVAGTIPYEEMNPIQAAFAVVNKNLR 401
K Y + VD ++ G++++EM AG P+ PIQ +V+ +R
Sbjct: 213 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR 257
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 101/201 (50%), Gaps = 16/201 (7%)
Query: 232 EVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIAL 291
E +L ++ P ++K + K ++ EY++ G + ++L ++ + P + A
Sbjct: 78 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAA-- 135
Query: 292 DIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIACEE-----VYCDALSDDPGT 346
I EY+HS +I+RDLKPEN+LID++ ++++ DFG A C GT
Sbjct: 136 QIVLTFEYLHSLDLIYRDLKPENLLIDEQGYIQVTDFGFAKRVKGRTWXLC-------GT 188
Query: 347 YRWMAPEMIKHKSYGRKVDVYSFGLILWEMVAGTIPYEEMNPIQAAFAVVNKNLRPAIPG 406
++APE+I K Y + VD ++ G++++EM AG P+ PIQ +V+ +R P
Sbjct: 189 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR--FPS 246
Query: 407 DCPPAMAALIEQCWSLQPDKR 427
+ L+ + KR
Sbjct: 247 HFSSDLKDLLRNLLQVDLTKR 267
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 93/175 (53%), Gaps = 14/175 (8%)
Query: 232 EVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIAL 291
E +L ++ P ++K + K ++ EY+ G + ++L ++ + P + A
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAA-- 148
Query: 292 DIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIACEE-----VYCDALSDDPGT 346
I EY+HS +I+RDLKPEN+LIDQ+ ++++ DFG A C GT
Sbjct: 149 QIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-------GT 201
Query: 347 YRWMAPEMIKHKSYGRKVDVYSFGLILWEMVAGTIPYEEMNPIQAAFAVVNKNLR 401
++APE+I K Y + VD ++ G++++EM AG P+ PIQ +V+ +R
Sbjct: 202 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR 256
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 96/201 (47%), Gaps = 7/201 (3%)
Query: 230 NREVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAI 289
RE ++SRL +P +K + Y G L Y+ K+ +
Sbjct: 81 TRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTA 140
Query: 290 ALDIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIA---CEEVYCDALSDDPGT 346
+I +EY+H +G+IHRDLKPEN+L++++ H++I DFG A E + GT
Sbjct: 141 --EIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGT 198
Query: 347 YRWMAPEMIKHKSYGRKVDVYSFGLILWEMVAGTIPYEEMNPIQAAFAVVNKNLRPAIPG 406
++++PE++ KS + D+++ G I++++VAG P+ N ++ L P
Sbjct: 199 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKII--KLEYDFPE 256
Query: 407 DCPPAMAALIEQCWSLQPDKR 427
P L+E+ L KR
Sbjct: 257 KFFPKARDLVEKLLVLDATKR 277
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 77/313 (24%), Positives = 142/313 (45%), Gaps = 25/313 (7%)
Query: 161 GGVRVNAVDAADEHTVDLSQLFLGLRFAHGAHSRLYHGIYKDEPVAVKIIRIPDDDENET 220
G ++++ D DL L R A+G+ +++ H + +AVK IR T
Sbjct: 7 GKLKISPEQHWDFTAEDLKDLGEIGRGAYGSVNKMVHKP-SGQIMAVKRIR-------ST 58
Query: 221 LAARLEKQFNREVALLSRLHN-PNVIKFVAACKKPPVYCVITEYLSEG--SLRAYLHKLE 277
+ + +KQ ++ ++ R + P +++F A + + E +S Y++ +
Sbjct: 59 VDEKEQKQLLMDLDVVMRSSDCPYIVQFYGALFREGDCWICMELMSTSFDKFYKYVYSVL 118
Query: 278 HKTLPLPKLIAIALDIARGMEYIHSQ-GVIHRDLKPENVLIDQEFHLKIADFGIACEEVY 336
+P L I L + + ++ +IHRD+KP N+L+D+ ++K+ DFGI+ + V
Sbjct: 119 DDVIPEEILGKITLATVKALNHLKENLKIIHRDIKPSNILLDRSGNIKLCDFGISGQLVD 178
Query: 337 CDALSDDPGTYRWMAPEMI----KHKSYGRKVDVYSFGLILWEMVAGTIPYEEMNPIQAA 392
A + D G +MAPE I + Y + DV+S G+ L+E+ G PY + N +
Sbjct: 179 SIAKTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVFDQ 238
Query: 393 FAVVNKNLRPAIPG----DCPPAMAALIEQCWSLQPDKRPEFWHIVK-----VLEQFETS 443
V K P + + P+ + C + KRP++ ++K + E+
Sbjct: 239 LTQVVKGDPPQLSNSEEREFSPSFINFVNLCLTKDESKRPKYKELLKHPFILMYEERAVE 298
Query: 444 LACNGTLNLVQNP 456
+AC L Q P
Sbjct: 299 VACYVCKILDQMP 311
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 92/175 (52%), Gaps = 14/175 (8%)
Query: 232 EVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIAL 291
E +L ++ P ++K + K ++ EY G + ++L ++ + P + A
Sbjct: 92 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAA-- 149
Query: 292 DIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIACEE-----VYCDALSDDPGT 346
I EY+HS +I+RDLKPEN++IDQ+ ++K+ DFG A C GT
Sbjct: 150 QIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLC-------GT 202
Query: 347 YRWMAPEMIKHKSYGRKVDVYSFGLILWEMVAGTIPYEEMNPIQAAFAVVNKNLR 401
++APE+I K Y + VD ++ G++++EM AG P+ PIQ +V+ +R
Sbjct: 203 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR 257
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 105/218 (48%), Gaps = 17/218 (7%)
Query: 186 RFAHGAHSRLYHGIYKDEPV--AVKIIRIPDDDENETLAARLEKQFNREVALLSRLHNPN 243
GA ++Y K+ V A K+I ++E E + E+ +L+ +PN
Sbjct: 44 ELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELE--------DYMVEIDILASCDHPN 95
Query: 244 VIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIALDIARGMEYIHSQ 303
++K + A ++ E+ + G++ A + +LE + L ++ + + Y+H
Sbjct: 96 IVKLLDAFYYENNLWILIEFCAGGAVDAVMLELE-RPLTESQIQVVCKQTLDALNYLHDN 154
Query: 304 GVIHRDLKPENVLIDQEFHLKIADFGIACEEVYCDALSDD-PGTYRWMAPEMI-----KH 357
+IHRDLK N+L + +K+ADFG++ + D GT WMAPE++ K
Sbjct: 155 KIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQRRDSFIGTPYWMAPEVVMCETSKD 214
Query: 358 KSYGRKVDVYSFGLILWEMVAGTIPYEEMNPIQAAFAV 395
+ Y K DV+S G+ L EM P+ E+NP++ +
Sbjct: 215 RPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKI 252
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 96/201 (47%), Gaps = 7/201 (3%)
Query: 230 NREVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAI 289
RE ++SRL +P +K + Y G L Y+ K+ +
Sbjct: 78 TRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTA 137
Query: 290 ALDIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIA---CEEVYCDALSDDPGT 346
+I +EY+H +G+IHRDLKPEN+L++++ H++I DFG A E + GT
Sbjct: 138 --EIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 195
Query: 347 YRWMAPEMIKHKSYGRKVDVYSFGLILWEMVAGTIPYEEMNPIQAAFAVVNKNLRPAIPG 406
++++PE++ KS + D+++ G I++++VAG P+ N ++ L P
Sbjct: 196 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKII--KLEYDFPE 253
Query: 407 DCPPAMAALIEQCWSLQPDKR 427
P L+E+ L KR
Sbjct: 254 KFFPKARDLVEKLLVLDATKR 274
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 92/175 (52%), Gaps = 14/175 (8%)
Query: 232 EVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIAL 291
E +L ++ P ++K + K ++ EY G + ++L ++ + P + A
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAA-- 148
Query: 292 DIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIACEE-----VYCDALSDDPGT 346
I EY+HS +I+RDLKPEN++IDQ+ ++K+ DFG A C GT
Sbjct: 149 QIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLC-------GT 201
Query: 347 YRWMAPEMIKHKSYGRKVDVYSFGLILWEMVAGTIPYEEMNPIQAAFAVVNKNLR 401
++APE+I K Y + VD ++ G++++EM AG P+ PIQ +V+ +R
Sbjct: 202 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR 256
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 96/201 (47%), Gaps = 7/201 (3%)
Query: 230 NREVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAI 289
RE ++SRL +P +K + Y G L Y+ K+ +
Sbjct: 62 TRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTA 121
Query: 290 ALDIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIA---CEEVYCDALSDDPGT 346
+I +EY+H +G+IHRDLKPEN+L++++ H++I DFG A E + GT
Sbjct: 122 --EIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 179
Query: 347 YRWMAPEMIKHKSYGRKVDVYSFGLILWEMVAGTIPYEEMNPIQAAFAVVNKNLRPAIPG 406
++++PE++ KS + D+++ G I++++VAG P+ N ++ L P
Sbjct: 180 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKII--KLEYDFPE 237
Query: 407 DCPPAMAALIEQCWSLQPDKR 427
P L+E+ L KR
Sbjct: 238 KFFPKARDLVEKLLVLDATKR 258
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 96/201 (47%), Gaps = 7/201 (3%)
Query: 230 NREVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAI 289
RE ++SRL +P +K + Y G L Y+ K+ +
Sbjct: 80 TRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTA 139
Query: 290 ALDIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIA---CEEVYCDALSDDPGT 346
+I +EY+H +G+IHRDLKPEN+L++++ H++I DFG A E + GT
Sbjct: 140 --EIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 197
Query: 347 YRWMAPEMIKHKSYGRKVDVYSFGLILWEMVAGTIPYEEMNPIQAAFAVVNKNLRPAIPG 406
++++PE++ KS + D+++ G I++++VAG P+ N ++ L P
Sbjct: 198 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKII--KLEYDFPE 255
Query: 407 DCPPAMAALIEQCWSLQPDKR 427
P L+E+ L KR
Sbjct: 256 KFFPKARDLVEKLLVLDATKR 276
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 93/175 (53%), Gaps = 14/175 (8%)
Query: 232 EVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIAL 291
E +L ++ P ++K + K ++ EY++ G + ++L ++ + P + A
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAA-- 148
Query: 292 DIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIACEE-----VYCDALSDDPGT 346
I EY+HS +I+RDLKPEN+LIDQ+ ++++ DFG A C GT
Sbjct: 149 QIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-------GT 201
Query: 347 YRWMAPEMIKHKSYGRKVDVYSFGLILWEMVAGTIPYEEMNPIQAAFAVVNKNLR 401
+APE+I K Y + VD ++ G++++EM AG P+ PIQ +V+ +R
Sbjct: 202 PEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR 256
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 96/201 (47%), Gaps = 7/201 (3%)
Query: 230 NREVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAI 289
RE ++SRL +P +K + Y G L Y+ K+ +
Sbjct: 56 TRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTA 115
Query: 290 ALDIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIA---CEEVYCDALSDDPGT 346
+I +EY+H +G+IHRDLKPEN+L++++ H++I DFG A E + GT
Sbjct: 116 --EIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 173
Query: 347 YRWMAPEMIKHKSYGRKVDVYSFGLILWEMVAGTIPYEEMNPIQAAFAVVNKNLRPAIPG 406
++++PE++ KS + D+++ G I++++VAG P+ N ++ L P
Sbjct: 174 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKII--KLEYDFPE 231
Query: 407 DCPPAMAALIEQCWSLQPDKR 427
P L+E+ L KR
Sbjct: 232 KFFPKARDLVEKLLVLDATKR 252
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 96/201 (47%), Gaps = 7/201 (3%)
Query: 230 NREVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAI 289
RE ++SRL +P +K + Y G L Y+ K+ +
Sbjct: 78 TRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTA 137
Query: 290 ALDIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIA---CEEVYCDALSDDPGT 346
+I +EY+H +G+IHRDLKPEN+L++++ H++I DFG A E + GT
Sbjct: 138 --EIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 195
Query: 347 YRWMAPEMIKHKSYGRKVDVYSFGLILWEMVAGTIPYEEMNPIQAAFAVVNKNLRPAIPG 406
++++PE++ KS + D+++ G I++++VAG P+ N ++ L P
Sbjct: 196 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKII--KLEYDFPE 253
Query: 407 DCPPAMAALIEQCWSLQPDKR 427
P L+E+ L KR
Sbjct: 254 KFFPKARDLVEKLLVLDATKR 274
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 96/201 (47%), Gaps = 7/201 (3%)
Query: 230 NREVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAI 289
RE ++SRL +P +K + Y G L Y+ K+ +
Sbjct: 55 TRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTA 114
Query: 290 ALDIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIA---CEEVYCDALSDDPGT 346
+I +EY+H +G+IHRDLKPEN+L++++ H++I DFG A E + GT
Sbjct: 115 --EIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 172
Query: 347 YRWMAPEMIKHKSYGRKVDVYSFGLILWEMVAGTIPYEEMNPIQAAFAVVNKNLRPAIPG 406
++++PE++ KS + D+++ G I++++VAG P+ N ++ L P
Sbjct: 173 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKII--KLEYDFPE 230
Query: 407 DCPPAMAALIEQCWSLQPDKR 427
P L+E+ L KR
Sbjct: 231 KFFPKARDLVEKLLVLDATKR 251
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 96/201 (47%), Gaps = 7/201 (3%)
Query: 230 NREVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAI 289
RE ++SRL +P +K + Y G L Y+ K+ +
Sbjct: 78 TRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTA 137
Query: 290 ALDIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIA---CEEVYCDALSDDPGT 346
+I +EY+H +G+IHRDLKPEN+L++++ H++I DFG A E + GT
Sbjct: 138 --EIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 195
Query: 347 YRWMAPEMIKHKSYGRKVDVYSFGLILWEMVAGTIPYEEMNPIQAAFAVVNKNLRPAIPG 406
++++PE++ KS + D+++ G I++++VAG P+ N ++ L P
Sbjct: 196 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKII--KLEYDFPE 253
Query: 407 DCPPAMAALIEQCWSLQPDKR 427
P L+E+ L KR
Sbjct: 254 KFFPKARDLVEKLLVLDATKR 274
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 96/201 (47%), Gaps = 7/201 (3%)
Query: 230 NREVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAI 289
RE ++SRL +P +K + Y G L Y+ K+ +
Sbjct: 80 TRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTA 139
Query: 290 ALDIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIA---CEEVYCDALSDDPGT 346
+I +EY+H +G+IHRDLKPEN+L++++ H++I DFG A E + GT
Sbjct: 140 --EIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 197
Query: 347 YRWMAPEMIKHKSYGRKVDVYSFGLILWEMVAGTIPYEEMNPIQAAFAVVNKNLRPAIPG 406
++++PE++ KS + D+++ G I++++VAG P+ N ++ L P
Sbjct: 198 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKII--KLEYDFPE 255
Query: 407 DCPPAMAALIEQCWSLQPDKR 427
P L+E+ L KR
Sbjct: 256 KFFPKARDLVEKLLVLDATKR 276
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 96/201 (47%), Gaps = 7/201 (3%)
Query: 230 NREVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAI 289
RE ++SRL +P +K + Y G L Y+ K+ +
Sbjct: 80 TRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTA 139
Query: 290 ALDIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIA---CEEVYCDALSDDPGT 346
+I +EY+H +G+IHRDLKPEN+L++++ H++I DFG A E + GT
Sbjct: 140 --EIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 197
Query: 347 YRWMAPEMIKHKSYGRKVDVYSFGLILWEMVAGTIPYEEMNPIQAAFAVVNKNLRPAIPG 406
++++PE++ KS + D+++ G I++++VAG P+ N ++ L P
Sbjct: 198 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKII--KLEYDFPE 255
Query: 407 DCPPAMAALIEQCWSLQPDKR 427
P L+E+ L KR
Sbjct: 256 KFFPKARDLVEKLLVLDATKR 276
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 92/175 (52%), Gaps = 14/175 (8%)
Query: 232 EVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIAL 291
E +L ++ P ++K + K ++ EY+ G + ++L ++ P + A
Sbjct: 84 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAA-- 141
Query: 292 DIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIACEE-----VYCDALSDDPGT 346
I EY+HS +I+RDLKPEN+LIDQ+ ++++ DFG A C GT
Sbjct: 142 QIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-------GT 194
Query: 347 YRWMAPEMIKHKSYGRKVDVYSFGLILWEMVAGTIPYEEMNPIQAAFAVVNKNLR 401
++APE+I K Y + VD ++ G++++EM AG P+ PIQ +V+ +R
Sbjct: 195 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR 249
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 96/201 (47%), Gaps = 7/201 (3%)
Query: 230 NREVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAI 289
RE ++SRL +P +K + Y G L Y+ K+ +
Sbjct: 57 TRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTA 116
Query: 290 ALDIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIA---CEEVYCDALSDDPGT 346
+I +EY+H +G+IHRDLKPEN+L++++ H++I DFG A E + GT
Sbjct: 117 --EIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 174
Query: 347 YRWMAPEMIKHKSYGRKVDVYSFGLILWEMVAGTIPYEEMNPIQAAFAVVNKNLRPAIPG 406
++++PE++ KS + D+++ G I++++VAG P+ N ++ L P
Sbjct: 175 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKII--KLEYDFPE 232
Query: 407 DCPPAMAALIEQCWSLQPDKR 427
P L+E+ L KR
Sbjct: 233 KFFPKARDLVEKLLVLDATKR 253
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 73/279 (26%), Positives = 127/279 (45%), Gaps = 26/279 (9%)
Query: 184 GLRFAHGAHSRLYHGIYKDEPVAVKIIRIPDDDENETLAARLEKQFNREVALLSRLHNPN 243
G + G +Y G + VAVK + D E L++QF++E+ + ++ + N
Sbjct: 27 GNKXGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTE----ELKQQFDQEIKVXAKCQHEN 82
Query: 244 VIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLP--KLIAIALDIARGMEYIH 301
+++ + C++ Y GSL L L+ T PL IA A G+ ++H
Sbjct: 83 LVELLGFSSDGDDLCLVYVYXPNGSLLDRLSCLD-GTPPLSWHXRCKIAQGAANGINFLH 141
Query: 302 SQGVIHRDLKPENVLIDQEFHLKIADFGIA-CEEVYCDAL--SDDPGTYRWMAPEMIKHK 358
IHRD+K N+L+D+ F KI+DFG+A E + + S GT + APE ++ +
Sbjct: 142 ENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQXVXXSRIVGTTAYXAPEALRGE 201
Query: 359 SYGRKVDVYSFGLILWEMVAGTIPYEEMNPIQAAFAV--------------VNKNLRPAI 404
K D+YSFG++L E++ G +E Q + ++K A
Sbjct: 202 -ITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDIKEEIEDEEKTIEDYIDKKXNDA- 259
Query: 405 PGDCPPAMAALIEQCWSLQPDKRPEFWHIVKVLEQFETS 443
A ++ QC + +KRP+ + ++L++ S
Sbjct: 260 DSTSVEAXYSVASQCLHEKKNKRPDIKKVQQLLQEXTAS 298
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 96/201 (47%), Gaps = 7/201 (3%)
Query: 230 NREVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAI 289
RE ++SRL +P +K + Y G L Y+ K+ +
Sbjct: 58 TRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTA 117
Query: 290 ALDIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIA---CEEVYCDALSDDPGT 346
+I +EY+H +G+IHRDLKPEN+L++++ H++I DFG A E + GT
Sbjct: 118 --EIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 175
Query: 347 YRWMAPEMIKHKSYGRKVDVYSFGLILWEMVAGTIPYEEMNPIQAAFAVVNKNLRPAIPG 406
++++PE++ KS + D+++ G I++++VAG P+ N ++ L P
Sbjct: 176 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKII--KLEYDFPE 233
Query: 407 DCPPAMAALIEQCWSLQPDKR 427
P L+E+ L KR
Sbjct: 234 KFFPKARDLVEKLLVLDATKR 254
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 96/201 (47%), Gaps = 7/201 (3%)
Query: 230 NREVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAI 289
RE ++SRL +P +K + Y G L Y+ K+ +
Sbjct: 77 TRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTA 136
Query: 290 ALDIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIA---CEEVYCDALSDDPGT 346
+I +EY+H +G+IHRDLKPEN+L++++ H++I DFG A E + GT
Sbjct: 137 --EIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 194
Query: 347 YRWMAPEMIKHKSYGRKVDVYSFGLILWEMVAGTIPYEEMNPIQAAFAVVNKNLRPAIPG 406
++++PE++ KS + D+++ G I++++VAG P+ N ++ L P
Sbjct: 195 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKII--KLEYDFPE 252
Query: 407 DCPPAMAALIEQCWSLQPDKR 427
P L+E+ L KR
Sbjct: 253 KFFPKARDLVEKLLVLDATKR 273
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 96/201 (47%), Gaps = 7/201 (3%)
Query: 230 NREVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAI 289
RE ++SRL +P +K + Y G L Y+ K+ +
Sbjct: 81 TRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTA 140
Query: 290 ALDIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIA---CEEVYCDALSDDPGT 346
+I +EY+H +G+IHRDLKPEN+L++++ H++I DFG A E + GT
Sbjct: 141 --EIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 198
Query: 347 YRWMAPEMIKHKSYGRKVDVYSFGLILWEMVAGTIPYEEMNPIQAAFAVVNKNLRPAIPG 406
++++PE++ KS + D+++ G I++++VAG P+ N ++ L P
Sbjct: 199 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKII--KLEYDFPE 256
Query: 407 DCPPAMAALIEQCWSLQPDKR 427
P L+E+ L KR
Sbjct: 257 KFFPKARDLVEKLLVLDATKR 277
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 64/250 (25%), Positives = 122/250 (48%), Gaps = 13/250 (5%)
Query: 190 GAHSRLYHGIYKDEPV--AVKIIRIPDDDENETLAARLEKQFNRE-VALLSRLHNPNVIK 246
G+ ++ +K E V AVK+++ + L + EK E LL + +P ++
Sbjct: 49 GSFGKVLLARHKAEEVFYAVKVLQ-----KKAILKKKEEKHIMSERNVLLKNVKHPFLVG 103
Query: 247 FVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIALDIARGMEYIHSQGVI 306
+ + + +Y++ G L + H + P+ A +IA + Y+HS ++
Sbjct: 104 LHFSFQTADKLYFVLDYINGGEL--FYHLQRERCFLEPRARFYAAEIASALGYLHSLNIV 161
Query: 307 HRDLKPENVLIDQEFHLKIADFGIACEEV-YCDALSDDPGTYRWMAPEMIKHKSYGRKVD 365
+RDLKPEN+L+D + H+ + DFG+ E + + S GT ++APE++ + Y R VD
Sbjct: 162 YRDLKPENILLDSQGHIVLTDFGLCKENIEHNSTTSTFCGTPEYLAPEVLHKQPYDRTVD 221
Query: 366 VYSFGLILWEMVAGTIPYEEMNPIQAAFAVVNK--NLRPAIPGDCPPAMAALIEQCWSLQ 423
+ G +L+EM+ G P+ N + ++NK L+P I + L+++ + +
Sbjct: 222 WWCLGAVLYEMLYGLPPFYSRNTAEMYDNILNKPLQLKPNITNSARHLLEGLLQKDRTKR 281
Query: 424 PDKRPEFWHI 433
+ +F I
Sbjct: 282 LGAKDDFMEI 291
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 56/180 (31%), Positives = 93/180 (51%), Gaps = 15/180 (8%)
Query: 205 VAVKIIRIPDDDENETLAARLEKQFNREVALLSRLHN---PNVIKFVAAC-----KKPPV 256
VA+K +R+ +E L+ REVA+L L PNV++ C +
Sbjct: 40 VALKRVRVQTGEEGMPLST------IREVAVLRHLETFEHPNVVRLFDVCTVSRTDRETK 93
Query: 257 YCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIALDIARGMEYIHSQGVIHRDLKPENVL 316
++ E++ + L YL K+ +P + + + RG++++HS V+HRDLKP+N+L
Sbjct: 94 LTLVFEHVDQ-DLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNIL 152
Query: 317 IDQEFHLKIADFGIACEEVYCDALSDDPGTYRWMAPEMIKHKSYGRKVDVYSFGLILWEM 376
+ +K+ADFG+A + AL+ T + APE++ SY VD++S G I EM
Sbjct: 153 VTSSGQIKLADFGLARIYSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEM 212
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 92/175 (52%), Gaps = 14/175 (8%)
Query: 232 EVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIAL 291
E +L ++ P ++K + K ++ EY+ G + ++L ++ P + A
Sbjct: 92 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAA-- 149
Query: 292 DIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIACEE-----VYCDALSDDPGT 346
I EY+HS +I+RDLKPEN+LIDQ+ ++++ DFG A C GT
Sbjct: 150 QIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-------GT 202
Query: 347 YRWMAPEMIKHKSYGRKVDVYSFGLILWEMVAGTIPYEEMNPIQAAFAVVNKNLR 401
++APE+I K Y + VD ++ G++++EM AG P+ PIQ +V+ +R
Sbjct: 203 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR 257
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 89.0 bits (219), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 105/218 (48%), Gaps = 17/218 (7%)
Query: 186 RFAHGAHSRLYHGIYKDEPV--AVKIIRIPDDDENETLAARLEKQFNREVALLSRLHNPN 243
GA ++Y K+ V A K+I ++E E + E+ +L+ +PN
Sbjct: 44 ELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELE--------DYMVEIDILASCDHPN 95
Query: 244 VIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIALDIARGMEYIHSQ 303
++K + A ++ E+ + G++ A + +LE + L ++ + + Y+H
Sbjct: 96 IVKLLDAFYYENNLWILIEFCAGGAVDAVMLELE-RPLTESQIQVVCKQTLDALNYLHDN 154
Query: 304 GVIHRDLKPENVLIDQEFHLKIADFGIACEEVYCDALSDD-PGTYRWMAPEMI-----KH 357
+IHRDLK N+L + +K+ADFG++ + D GT WMAPE++ K
Sbjct: 155 KIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRXIQRRDSFIGTPYWMAPEVVMCETSKD 214
Query: 358 KSYGRKVDVYSFGLILWEMVAGTIPYEEMNPIQAAFAV 395
+ Y K DV+S G+ L EM P+ E+NP++ +
Sbjct: 215 RPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKI 252
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 89.0 bits (219), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 92/175 (52%), Gaps = 14/175 (8%)
Query: 232 EVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIAL 291
E +L ++ P ++K + K ++ EY+ G + ++L ++ P + A
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAA-- 148
Query: 292 DIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIACEE-----VYCDALSDDPGT 346
I EY+HS +I+RDLKPEN+LIDQ+ ++++ DFG A C GT
Sbjct: 149 QIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-------GT 201
Query: 347 YRWMAPEMIKHKSYGRKVDVYSFGLILWEMVAGTIPYEEMNPIQAAFAVVNKNLR 401
++APE+I K Y + VD ++ G++++EM AG P+ PIQ +V+ +R
Sbjct: 202 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR 256
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 89.0 bits (219), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 53/175 (30%), Positives = 93/175 (53%), Gaps = 14/175 (8%)
Query: 232 EVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIAL 291
E +L ++ P ++K + K ++ EY++ G + ++L ++ + P + A
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAA-- 148
Query: 292 DIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIACEE-----VYCDALSDDPGT 346
I EY+HS +I+RDLKPEN+LIDQ+ ++++ DFG A C GT
Sbjct: 149 QIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-------GT 201
Query: 347 YRWMAPEMIKHKSYGRKVDVYSFGLILWEMVAGTIPYEEMNPIQAAFAVVNKNLR 401
++AP +I K Y + VD ++ G++++EM AG P+ PIQ +V+ +R
Sbjct: 202 PEYLAPAIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR 256
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 89.0 bits (219), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 92/175 (52%), Gaps = 14/175 (8%)
Query: 232 EVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIAL 291
E +L ++ P ++K + K ++ EY+ G + ++L ++ P + A
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAA-- 148
Query: 292 DIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIACEE-----VYCDALSDDPGT 346
I EY+HS +I+RDLKPEN+LIDQ+ ++++ DFG A C GT
Sbjct: 149 QIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC-------GT 201
Query: 347 YRWMAPEMIKHKSYGRKVDVYSFGLILWEMVAGTIPYEEMNPIQAAFAVVNKNLR 401
++APE+I K Y + VD ++ G++++EM AG P+ PIQ +V+ +R
Sbjct: 202 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR 256
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 89.0 bits (219), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 63/197 (31%), Positives = 102/197 (51%), Gaps = 11/197 (5%)
Query: 186 RFAHGAHSRLYHGIYK--DEPVAVKIIRIPDDDENETLAARLEKQFNREVALLSRLHNPN 243
+ G + +Y K E VA+K IR+ D E E + + RE++LL L++PN
Sbjct: 11 KIGEGTYGVVYKARNKLTGEVVALKKIRL--DTETEGVPSTA----IREISLLKELNHPN 64
Query: 244 VIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIALDIARGMEYIHSQ 303
++K + ++ E+LS L+ ++ +PLP + + + +G+ + HS
Sbjct: 65 IVKLLDVIHTENKLYLVFEFLSM-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 123
Query: 304 GVIHRDLKPENVLIDQEFHLKIADFGIA-CEEVYCDALSDDPGTYRWMAPE-MIKHKSYG 361
V+HRDLKPEN+LI+ E +K+ADFG+A V + T + APE ++ K Y
Sbjct: 124 RVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYS 183
Query: 362 RKVDVYSFGLILWEMVA 378
VD++S G I EMV
Sbjct: 184 TAVDIWSLGCIFAEMVT 200
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 63/197 (31%), Positives = 102/197 (51%), Gaps = 11/197 (5%)
Query: 186 RFAHGAHSRLYHGIYK--DEPVAVKIIRIPDDDENETLAARLEKQFNREVALLSRLHNPN 243
+ G + +Y K E VA+K IR+ D E E + + RE++LL L++PN
Sbjct: 13 KIGEGTYGVVYKARNKLTGEVVALKKIRL--DTETEGVPSTA----IREISLLKELNHPN 66
Query: 244 VIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIALDIARGMEYIHSQ 303
++K + ++ E+LS L+ ++ +PLP + + + +G+ + HS
Sbjct: 67 IVKLLDVIHTENKLYLVFEFLSM-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 125
Query: 304 GVIHRDLKPENVLIDQEFHLKIADFGIA-CEEVYCDALSDDPGTYRWMAPE-MIKHKSYG 361
V+HRDLKPEN+LI+ E +K+ADFG+A V + T + APE ++ K Y
Sbjct: 126 RVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYS 185
Query: 362 RKVDVYSFGLILWEMVA 378
VD++S G I EMV
Sbjct: 186 TAVDIWSLGCIFAEMVT 202
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 96/201 (47%), Gaps = 7/201 (3%)
Query: 230 NREVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAI 289
RE ++SRL +P +K + Y G L Y+ K+ +
Sbjct: 85 TRERDVMSRLDHPFFVKLYFCFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTA 144
Query: 290 ALDIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIA---CEEVYCDALSDDPGT 346
+I +EY+H +G+IHRDLKPEN+L++++ H++I DFG A E + GT
Sbjct: 145 --EIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 202
Query: 347 YRWMAPEMIKHKSYGRKVDVYSFGLILWEMVAGTIPYEEMNPIQAAFAVVNKNLRPAIPG 406
++++PE++ KS + D+++ G I++++VAG P+ N ++ L P
Sbjct: 203 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKII--KLEYDFPE 260
Query: 407 DCPPAMAALIEQCWSLQPDKR 427
P L+E+ L KR
Sbjct: 261 KFFPKARDLVEKLLVLDATKR 281
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 89/158 (56%), Gaps = 5/158 (3%)
Query: 232 EVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIAL 291
E +L + +P ++ + A + +I EYLS G L +LE + + + L
Sbjct: 71 ERNILEEVKHPFIVDLIYAFQTGGKLYLILEYLSGGEL---FMQLEREGIFMEDTACFYL 127
Query: 292 -DIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIACEEVYCDALSDD-PGTYRW 349
+I+ + ++H +G+I+RDLKPEN++++ + H+K+ DFG+ E ++ ++ GT +
Sbjct: 128 AEISMALGHLHQKGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHTFCGTIEY 187
Query: 350 MAPEMIKHKSYGRKVDVYSFGLILWEMVAGTIPYEEMN 387
MAPE++ + R VD +S G ++++M+ G P+ N
Sbjct: 188 MAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGEN 225
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 56/180 (31%), Positives = 93/180 (51%), Gaps = 15/180 (8%)
Query: 205 VAVKIIRIPDDDENETLAARLEKQFNREVALLSRLHN---PNVIKFVAACK-----KPPV 256
VA+K +R+ +E L+ REVA+L L PNV++ C +
Sbjct: 40 VALKRVRVQTGEEGMPLST------IREVAVLRHLETFEHPNVVRLFDVCTVSRTDRETK 93
Query: 257 YCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIALDIARGMEYIHSQGVIHRDLKPENVL 316
++ E++ + L YL K+ +P + + + RG++++HS V+HRDLKP+N+L
Sbjct: 94 LTLVFEHVDQ-DLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNIL 152
Query: 317 IDQEFHLKIADFGIACEEVYCDALSDDPGTYRWMAPEMIKHKSYGRKVDVYSFGLILWEM 376
+ +K+ADFG+A + AL+ T + APE++ SY VD++S G I EM
Sbjct: 153 VTSSGQIKLADFGLARIYSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEM 212
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 88.6 bits (218), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 89/158 (56%), Gaps = 5/158 (3%)
Query: 232 EVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIAL 291
E +L + +P ++ + A + +I EYLS G L +LE + + + L
Sbjct: 71 ERNILEEVKHPFIVDLIYAFQTGGKLYLILEYLSGGEL---FMQLEREGIFMEDTACFYL 127
Query: 292 -DIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIACEEVYCDALSDD-PGTYRW 349
+I+ + ++H +G+I+RDLKPEN++++ + H+K+ DFG+ E ++ ++ GT +
Sbjct: 128 AEISMALGHLHQKGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHXFCGTIEY 187
Query: 350 MAPEMIKHKSYGRKVDVYSFGLILWEMVAGTIPYEEMN 387
MAPE++ + R VD +S G ++++M+ G P+ N
Sbjct: 188 MAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGEN 225
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 88.6 bits (218), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 98/206 (47%), Gaps = 15/206 (7%)
Query: 187 FAHGAHSRLYHGIYKDEP-VAVKIIRIPDDDENETLAARLEKQFNREVALLSRLHNPNVI 245
G ++Y G D VAVK ++ E T L QF EV ++S + N++
Sbjct: 38 LGRGGFGKVYKGRLADGXLVAVKRLK-----EERTQGGEL--QFQTEVEMISMAVHRNLL 90
Query: 246 KFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPL--PKLIAIALDIARGMEYIHSQ 303
+ C P ++ Y++ GS+ + L + PL PK IAL ARG+ Y+H
Sbjct: 91 RLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDH 150
Query: 304 ---GVIHRDLKPENVLIDQEFHLKIADFGIACEEVYCDALSDDP--GTYRWMAPEMIKHK 358
+IHRD+K N+L+D+EF + DFG+A Y D G +APE +
Sbjct: 151 CDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXAVRGXIGHIAPEYLSTG 210
Query: 359 SYGRKVDVYSFGLILWEMVAGTIPYE 384
K DV+ +G++L E++ G ++
Sbjct: 211 KSSEKTDVFGYGVMLLELITGQRAFD 236
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 88.6 bits (218), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 56/180 (31%), Positives = 93/180 (51%), Gaps = 15/180 (8%)
Query: 205 VAVKIIRIPDDDENETLAARLEKQFNREVALLSRLHN---PNVIKFVAAC-----KKPPV 256
VA+K +R+ +E L+ REVA+L L PNV++ C +
Sbjct: 40 VALKRVRVQTGEEGMPLST------IREVAVLRHLETFEHPNVVRLFDVCTVSRTDRETK 93
Query: 257 YCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIALDIARGMEYIHSQGVIHRDLKPENVL 316
++ E++ + L YL K+ +P + + + RG++++HS V+HRDLKP+N+L
Sbjct: 94 LTLVFEHVDQ-DLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNIL 152
Query: 317 IDQEFHLKIADFGIACEEVYCDALSDDPGTYRWMAPEMIKHKSYGRKVDVYSFGLILWEM 376
+ +K+ADFG+A + AL+ T + APE++ SY VD++S G I EM
Sbjct: 153 VTSSGQIKLADFGLARIYSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEM 212
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 88.6 bits (218), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 105/218 (48%), Gaps = 17/218 (7%)
Query: 186 RFAHGAHSRLYHGIYKDEPV--AVKIIRIPDDDENETLAARLEKQFNREVALLSRLHNPN 243
GA ++Y K+ V A K+I ++E E + E+ +L+ +PN
Sbjct: 44 ELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELE--------DYMVEIDILASCDHPN 95
Query: 244 VIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIALDIARGMEYIHSQ 303
++K + A ++ E+ + G++ A + +LE + L ++ + + Y+H
Sbjct: 96 IVKLLDAFYYENNLWILIEFCAGGAVDAVMLELE-RPLTESQIQVVCKQTLDALNYLHDN 154
Query: 304 GVIHRDLKPENVLIDQEFHLKIADFGIACEEVYCDALSDD-PGTYRWMAPEMI-----KH 357
+IHRDLK N+L + +K+ADFG++ + D GT WMAPE++ K
Sbjct: 155 KIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRXIQRRDXFIGTPYWMAPEVVMCETSKD 214
Query: 358 KSYGRKVDVYSFGLILWEMVAGTIPYEEMNPIQAAFAV 395
+ Y K DV+S G+ L EM P+ E+NP++ +
Sbjct: 215 RPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKI 252
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 88.6 bits (218), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 68/248 (27%), Positives = 120/248 (48%), Gaps = 18/248 (7%)
Query: 208 KIIRIPDDDENETLAARL-----------EKQFNREVALLSRLHNPNVIKFVAACKKPPV 256
K I D D E A ++ +++ + E+A+ L NP+V+ F +
Sbjct: 57 KCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHGFFEDDDF 116
Query: 257 YCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIALDIARGMEYIHSQGVIHRDLKPENVL 316
V+ E SL LHK K + P+ +G++Y+H+ VIHRDLK N+
Sbjct: 117 VYVVLEICRRRSLLE-LHK-RRKAVTEPEARYFMRQTIQGVQYLHNNRVIHRDLKLGNLF 174
Query: 317 IDQEFHLKIADFGIACE-EVYCDALSDDPGTYRWMAPEMIKHKSYGRKVDVYSFGLILWE 375
++ + +KI DFG+A + E + GT ++APE++ K + +VD++S G IL+
Sbjct: 175 LNDDMDVKIGDFGLATKIEFDGERKKTLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYT 234
Query: 376 MVAGTIPYEEMNPIQAAFAVVNKNLRPAIPGDCPPAMAALIEQCWSLQPDKRPEFWHIVK 435
++ G P+ E + ++ + + KN ++P P +ALI + P RP ++
Sbjct: 235 LLVGKPPF-ETSCLKETYIRIKKN-EYSVPRHINPVASALIRRMLHADPTLRPSVAELLT 292
Query: 436 VLEQFETS 443
++F TS
Sbjct: 293 --DEFFTS 298
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 88.6 bits (218), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 53/175 (30%), Positives = 93/175 (53%), Gaps = 14/175 (8%)
Query: 232 EVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIAL 291
E +L ++ P ++K + K ++ EY G + ++L ++ + P + A
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAA-- 148
Query: 292 DIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIACEE-----VYCDALSDDPGT 346
I EY+HS +I+RDLKPEN++IDQ+ ++++ DFG+A C GT
Sbjct: 149 QIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIQVTDFGLAKRVKGRTWXLC-------GT 201
Query: 347 YRWMAPEMIKHKSYGRKVDVYSFGLILWEMVAGTIPYEEMNPIQAAFAVVNKNLR 401
++APE+I K Y + VD ++ G++++EM AG P+ PIQ +V+ +R
Sbjct: 202 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR 256
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 88.6 bits (218), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 61/197 (30%), Positives = 103/197 (52%), Gaps = 11/197 (5%)
Query: 186 RFAHGAHSRLYHGIYK--DEPVAVKIIRIPDDDENETLAARLEKQFNREVALLSRLHNPN 243
+ G + +Y K E VA+K IR+ D E E + + RE++LL L++PN
Sbjct: 17 KIGEGTYGVVYKARNKLTGEVVALKKIRL--DTETEGVPSTA----IREISLLKELNHPN 70
Query: 244 VIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIALDIARGMEYIHSQ 303
++K + ++ E+L + L+ ++ +PLP + + + +G+ + HS
Sbjct: 71 IVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 129
Query: 304 GVIHRDLKPENVLIDQEFHLKIADFGIA-CEEVYCDALSDDPGTYRWMAPE-MIKHKSYG 361
V+HRDLKP+N+LI+ E +K+ADFG+A V + + T + APE ++ K Y
Sbjct: 130 RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGXKYYS 189
Query: 362 RKVDVYSFGLILWEMVA 378
VD++S G I EMV
Sbjct: 190 TAVDIWSLGCIFAEMVT 206
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 88.6 bits (218), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 91/175 (52%), Gaps = 14/175 (8%)
Query: 232 EVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIAL 291
E +L ++ P ++K + K ++ EY G + ++L ++ P + A
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPHARFYAA-- 148
Query: 292 DIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIACEE-----VYCDALSDDPGT 346
I EY+HS +I+RDLKPEN++IDQ+ ++K+ DFG A C GT
Sbjct: 149 QIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLC-------GT 201
Query: 347 YRWMAPEMIKHKSYGRKVDVYSFGLILWEMVAGTIPYEEMNPIQAAFAVVNKNLR 401
++APE+I K Y + VD ++ G++++EM AG P+ PIQ +V+ +R
Sbjct: 202 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR 256
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 88.2 bits (217), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 68/248 (27%), Positives = 120/248 (48%), Gaps = 18/248 (7%)
Query: 208 KIIRIPDDDENETLAARL-----------EKQFNREVALLSRLHNPNVIKFVAACKKPPV 256
K I D D E A ++ +++ + E+A+ L NP+V+ F +
Sbjct: 57 KCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHGFFEDDDF 116
Query: 257 YCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIALDIARGMEYIHSQGVIHRDLKPENVL 316
V+ E SL LHK K + P+ +G++Y+H+ VIHRDLK N+
Sbjct: 117 VYVVLEICRRRSLLE-LHK-RRKAVTEPEARYFMRQTIQGVQYLHNNRVIHRDLKLGNLF 174
Query: 317 IDQEFHLKIADFGIACE-EVYCDALSDDPGTYRWMAPEMIKHKSYGRKVDVYSFGLILWE 375
++ + +KI DFG+A + E + GT ++APE++ K + +VD++S G IL+
Sbjct: 175 LNDDMDVKIGDFGLATKIEFDGERKKXLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYT 234
Query: 376 MVAGTIPYEEMNPIQAAFAVVNKNLRPAIPGDCPPAMAALIEQCWSLQPDKRPEFWHIVK 435
++ G P+ E + ++ + + KN ++P P +ALI + P RP ++
Sbjct: 235 LLVGKPPF-ETSCLKETYIRIKKN-EYSVPRHINPVASALIRRMLHADPTLRPSVAELLT 292
Query: 436 VLEQFETS 443
++F TS
Sbjct: 293 --DEFFTS 298
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 88.2 bits (217), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 61/197 (30%), Positives = 103/197 (52%), Gaps = 11/197 (5%)
Query: 186 RFAHGAHSRLYHGIYK--DEPVAVKIIRIPDDDENETLAARLEKQFNREVALLSRLHNPN 243
+ G + +Y K E VA+K IR+ D E E + + RE++LL L++PN
Sbjct: 10 KIGEGTYGVVYKARNKLTGEVVALKKIRL--DTETEGVPSTA----IREISLLKELNHPN 63
Query: 244 VIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIALDIARGMEYIHSQ 303
++K + ++ E+L + L+ ++ +PLP + + + +G+ + HS
Sbjct: 64 IVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 122
Query: 304 GVIHRDLKPENVLIDQEFHLKIADFGIA-CEEVYCDALSDDPGTYRWMAPE-MIKHKSYG 361
V+HRDLKP+N+LI+ E +K+ADFG+A V + + T + APE ++ K Y
Sbjct: 123 RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGXKYYS 182
Query: 362 RKVDVYSFGLILWEMVA 378
VD++S G I EMV
Sbjct: 183 TAVDIWSLGCIFAEMVT 199
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 53/175 (30%), Positives = 92/175 (52%), Gaps = 14/175 (8%)
Query: 232 EVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIAL 291
E +L ++ P ++K + K ++ EY G + ++L ++ + P + A
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAA-- 148
Query: 292 DIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIACEE-----VYCDALSDDPGT 346
I EY+HS +I+RDLKPEN++IDQ+ ++++ DFG A C GT
Sbjct: 149 QIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIQVTDFGFAKRVKGRTWXLC-------GT 201
Query: 347 YRWMAPEMIKHKSYGRKVDVYSFGLILWEMVAGTIPYEEMNPIQAAFAVVNKNLR 401
++APE+I K Y + VD ++ G++++EM AG P+ PIQ +V+ +R
Sbjct: 202 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR 256
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 62/197 (31%), Positives = 102/197 (51%), Gaps = 11/197 (5%)
Query: 186 RFAHGAHSRLYHGIYK--DEPVAVKIIRIPDDDENETLAARLEKQFNREVALLSRLHNPN 243
+ G + +Y K E VA+K IR+ D E E + + RE++LL L++PN
Sbjct: 11 KIGEGTYGVVYKARNKLTGEVVALKKIRL--DTETEGVPSTA----IREISLLKELNHPN 64
Query: 244 VIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIALDIARGMEYIHSQ 303
++K + ++ E+L + L+ ++ +PLP + + + +G+ + HS
Sbjct: 65 IVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 123
Query: 304 GVIHRDLKPENVLIDQEFHLKIADFGIA-CEEVYCDALSDDPGTYRWMAPE-MIKHKSYG 361
V+HRDLKPEN+LI+ E +K+ADFG+A V + T + APE ++ K Y
Sbjct: 124 RVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYS 183
Query: 362 RKVDVYSFGLILWEMVA 378
VD++S G I EMV
Sbjct: 184 TAVDIWSLGCIFAEMVT 200
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 61/197 (30%), Positives = 103/197 (52%), Gaps = 11/197 (5%)
Query: 186 RFAHGAHSRLYHGIYK--DEPVAVKIIRIPDDDENETLAARLEKQFNREVALLSRLHNPN 243
+ G + +Y K E VA+K IR+ D E E + + RE++LL L++PN
Sbjct: 10 KIGEGTYGVVYKARNKLTGEVVALKKIRL--DTETEGVPSTA----IREISLLKELNHPN 63
Query: 244 VIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIALDIARGMEYIHSQ 303
++K + ++ E+L + L+ ++ +PLP + + + +G+ + HS
Sbjct: 64 IVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLSFCHSH 122
Query: 304 GVIHRDLKPENVLIDQEFHLKIADFGIA-CEEVYCDALSDDPGTYRWMAPE-MIKHKSYG 361
V+HRDLKP+N+LI+ E +K+ADFG+A V + + T + APE ++ K Y
Sbjct: 123 RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYS 182
Query: 362 RKVDVYSFGLILWEMVA 378
VD++S G I EMV
Sbjct: 183 TAVDIWSLGCIFAEMVT 199
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 91/175 (52%), Gaps = 14/175 (8%)
Query: 232 EVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIAL 291
E +L ++ P + K + K ++ EY G + ++L ++ + P + A
Sbjct: 92 EKRILQAVNFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAA-- 149
Query: 292 DIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIACEE-----VYCDALSDDPGT 346
I EY+HS +I+RDLKPEN++IDQ+ ++K+ DFG A C GT
Sbjct: 150 QIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLC-------GT 202
Query: 347 YRWMAPEMIKHKSYGRKVDVYSFGLILWEMVAGTIPYEEMNPIQAAFAVVNKNLR 401
++APE+I K Y + VD ++ G++++EM AG P+ PIQ +V+ +R
Sbjct: 203 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR 257
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 62/197 (31%), Positives = 102/197 (51%), Gaps = 11/197 (5%)
Query: 186 RFAHGAHSRLYHGIYK--DEPVAVKIIRIPDDDENETLAARLEKQFNREVALLSRLHNPN 243
+ G + +Y K E VA+K IR+ D E E + + RE++LL L++PN
Sbjct: 12 KIGEGTYGVVYKARNKLTGEVVALKKIRL--DTETEGVPSTA----IREISLLKELNHPN 65
Query: 244 VIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIALDIARGMEYIHSQ 303
++K + ++ E+L + L+ ++ +PLP + + + +G+ + HS
Sbjct: 66 IVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 124
Query: 304 GVIHRDLKPENVLIDQEFHLKIADFGIA-CEEVYCDALSDDPGTYRWMAPE-MIKHKSYG 361
V+HRDLKPEN+LI+ E +K+ADFG+A V + T + APE ++ K Y
Sbjct: 125 RVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYS 184
Query: 362 RKVDVYSFGLILWEMVA 378
VD++S G I EMV
Sbjct: 185 TAVDIWSLGCIFAEMVT 201
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 91/175 (52%), Gaps = 14/175 (8%)
Query: 232 EVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIAL 291
E +L ++ P + K + K ++ EY G + ++L ++ + P + A
Sbjct: 92 EKRILQAVNFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAA-- 149
Query: 292 DIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIACEE-----VYCDALSDDPGT 346
I EY+HS +I+RDLKPEN++IDQ+ ++K+ DFG A C GT
Sbjct: 150 QIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLC-------GT 202
Query: 347 YRWMAPEMIKHKSYGRKVDVYSFGLILWEMVAGTIPYEEMNPIQAAFAVVNKNLR 401
++APE+I K Y + VD ++ G++++EM AG P+ PIQ +V+ +R
Sbjct: 203 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR 257
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 61/197 (30%), Positives = 103/197 (52%), Gaps = 11/197 (5%)
Query: 186 RFAHGAHSRLYHGIYK--DEPVAVKIIRIPDDDENETLAARLEKQFNREVALLSRLHNPN 243
+ G + +Y K E VA+K IR+ D E E + + RE++LL L++PN
Sbjct: 17 KIGEGTYGVVYKARNKLTGEVVALKKIRL--DTETEGVPSTA----IREISLLKELNHPN 70
Query: 244 VIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIALDIARGMEYIHSQ 303
++K + ++ E+L + L+ ++ +PLP + + + +G+ + HS
Sbjct: 71 IVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 129
Query: 304 GVIHRDLKPENVLIDQEFHLKIADFGIA-CEEVYCDALSDDPGTYRWMAPE-MIKHKSYG 361
V+HRDLKP+N+LI+ E +K+ADFG+A V + + T + APE ++ K Y
Sbjct: 130 RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYS 189
Query: 362 RKVDVYSFGLILWEMVA 378
VD++S G I EMV
Sbjct: 190 TAVDIWSLGCIFAEMVT 206
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 61/197 (30%), Positives = 103/197 (52%), Gaps = 11/197 (5%)
Query: 186 RFAHGAHSRLYHGIYK--DEPVAVKIIRIPDDDENETLAARLEKQFNREVALLSRLHNPN 243
+ G + +Y K E VA+K IR+ D E E + + RE++LL L++PN
Sbjct: 9 KIGEGTYGVVYKARNKLTGEVVALKKIRL--DTETEGVPSTA----IREISLLKELNHPN 62
Query: 244 VIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIALDIARGMEYIHSQ 303
++K + ++ E+L + L+ ++ +PLP + + + +G+ + HS
Sbjct: 63 IVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 121
Query: 304 GVIHRDLKPENVLIDQEFHLKIADFGIA-CEEVYCDALSDDPGTYRWMAPE-MIKHKSYG 361
V+HRDLKP+N+LI+ E +K+ADFG+A V + + T + APE ++ K Y
Sbjct: 122 RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYS 181
Query: 362 RKVDVYSFGLILWEMVA 378
VD++S G I EMV
Sbjct: 182 TAVDIWSLGCIFAEMVT 198
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 108/221 (48%), Gaps = 17/221 (7%)
Query: 187 FAHGAHSRLYHGIYKDEPV--AVKIIRIPDDDENETLAARLEKQFNREVALLSRLHNPNV 244
GA ++Y K+ A K+I ++E E + E+ +L+ +P +
Sbjct: 27 LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELE--------DYIVEIEILATCDHPYI 78
Query: 245 IKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIALDIARGMEYIHSQG 304
+K + A ++ E+ G++ A + +L+ + L P++ + + + ++HS+
Sbjct: 79 VKLLGAYYHDGKLWIMIEFCPGGAVDAIMLELD-RGLTEPQIQVVCRQMLEALNFLHSKR 137
Query: 305 VIHRDLKPENVLIDQEFHLKIADFGIACEEVYCDALSDD-PGTYRWMAPEMI-----KHK 358
+IHRDLK NVL+ E +++ADFG++ + + D GT WMAPE++ K
Sbjct: 138 IIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSFIGTPYWMAPEVVMCETMKDT 197
Query: 359 SYGRKVDVYSFGLILWEMVAGTIPYEEMNPIQAAFAVVNKN 399
Y K D++S G+ L EM P+ E+NP++ + +
Sbjct: 198 PYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSD 238
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 74/260 (28%), Positives = 115/260 (44%), Gaps = 20/260 (7%)
Query: 177 DLSQLFLGLR-FAHGAHSRLYHG--IYKDEPVAVKIIRIPDDDENETLAARLEKQFNREV 233
D +LF LR HG+ +Y + E VA+K + NE + +EV
Sbjct: 51 DPEKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKW-----QDIIKEV 105
Query: 234 ALLSRLHNPNVIKFVAACKKPPVYCVITEY-LSEGSLRAYLHKLEHKTLPLPKLIAIALD 292
L +L +PN I++ + ++ EY L S +HK K L ++ A+
Sbjct: 106 RFLQKLRHPNTIQYRGCYLREHTAWLVMEYCLGSASDLLEVHK---KPLQEVEIAAVTHG 162
Query: 293 IARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIACEEVYCDALSDDPGTYRWMAP 352
+G+ Y+HS +IHRD+K N+L+ + +K+ DFG A + GT WMAP
Sbjct: 163 ALQGLAYLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANXFV---GTPYWMAP 219
Query: 353 EMI---KHKSYGRKVDVYSFGLILWEMVAGTIPYEEMNPIQAAFAVVNKNLRPAI-PGDC 408
E+I Y KVDV+S G+ E+ P MN + A + + +N PA+ G
Sbjct: 220 EVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIA-QNESPALQSGHW 278
Query: 409 PPAMAALIEQCWSLQPDKRP 428
++ C P RP
Sbjct: 279 SEYFRNFVDSCLQKIPQDRP 298
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 61/197 (30%), Positives = 103/197 (52%), Gaps = 11/197 (5%)
Query: 186 RFAHGAHSRLYHGIYK--DEPVAVKIIRIPDDDENETLAARLEKQFNREVALLSRLHNPN 243
+ G + +Y K E VA+K IR+ D E E + + RE++LL L++PN
Sbjct: 11 KIGEGTYGVVYKARNKLTGEVVALKKIRL--DTETEGVPSTA----IREISLLKELNHPN 64
Query: 244 VIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIALDIARGMEYIHSQ 303
++K + ++ E+L + L+ ++ +PLP + + + +G+ + HS
Sbjct: 65 IVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 123
Query: 304 GVIHRDLKPENVLIDQEFHLKIADFGIA-CEEVYCDALSDDPGTYRWMAPE-MIKHKSYG 361
V+HRDLKP+N+LI+ E +K+ADFG+A V + + T + APE ++ K Y
Sbjct: 124 RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYS 183
Query: 362 RKVDVYSFGLILWEMVA 378
VD++S G I EMV
Sbjct: 184 TAVDIWSLGCIFAEMVT 200
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 74/260 (28%), Positives = 115/260 (44%), Gaps = 20/260 (7%)
Query: 177 DLSQLFLGLR-FAHGAHSRLYHG--IYKDEPVAVKIIRIPDDDENETLAARLEKQFNREV 233
D +LF LR HG+ +Y + E VA+K + NE + +EV
Sbjct: 12 DPEKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKW-----QDIIKEV 66
Query: 234 ALLSRLHNPNVIKFVAACKKPPVYCVITEY-LSEGSLRAYLHKLEHKTLPLPKLIAIALD 292
L +L +PN I++ + ++ EY L S +HK K L ++ A+
Sbjct: 67 RFLQKLRHPNTIQYRGCYLREHTAWLVMEYCLGSASDLLEVHK---KPLQEVEIAAVTHG 123
Query: 293 IARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIACEEVYCDALSDDPGTYRWMAP 352
+G+ Y+HS +IHRD+K N+L+ + +K+ DFG A + GT WMAP
Sbjct: 124 ALQGLAYLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANXFV---GTPYWMAP 180
Query: 353 EMI---KHKSYGRKVDVYSFGLILWEMVAGTIPYEEMNPIQAAFAVVNKNLRPAI-PGDC 408
E+I Y KVDV+S G+ E+ P MN + A + + +N PA+ G
Sbjct: 181 EVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIA-QNESPALQSGHW 239
Query: 409 PPAMAALIEQCWSLQPDKRP 428
++ C P RP
Sbjct: 240 SEYFRNFVDSCLQKIPQDRP 259
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 61/197 (30%), Positives = 103/197 (52%), Gaps = 11/197 (5%)
Query: 186 RFAHGAHSRLYHGIYK--DEPVAVKIIRIPDDDENETLAARLEKQFNREVALLSRLHNPN 243
+ G + +Y K E VA+K IR+ D E E + + RE++LL L++PN
Sbjct: 10 KIGEGTYGVVYKARNKLTGEVVALKKIRL--DTETEGVPSTA----IREISLLKELNHPN 63
Query: 244 VIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIALDIARGMEYIHSQ 303
++K + ++ E+L + L+ ++ +PLP + + + +G+ + HS
Sbjct: 64 IVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 122
Query: 304 GVIHRDLKPENVLIDQEFHLKIADFGIA-CEEVYCDALSDDPGTYRWMAPE-MIKHKSYG 361
V+HRDLKP+N+LI+ E +K+ADFG+A V + + T + APE ++ K Y
Sbjct: 123 RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYS 182
Query: 362 RKVDVYSFGLILWEMVA 378
VD++S G I EMV
Sbjct: 183 TAVDIWSLGCIFAEMVT 199
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 61/197 (30%), Positives = 103/197 (52%), Gaps = 11/197 (5%)
Query: 186 RFAHGAHSRLYHGIYK--DEPVAVKIIRIPDDDENETLAARLEKQFNREVALLSRLHNPN 243
+ G + +Y K E VA+K IR+ D E E + + RE++LL L++PN
Sbjct: 9 KIGEGTYGVVYKARNKLTGEVVALKKIRL--DTETEGVPSTA----IREISLLKELNHPN 62
Query: 244 VIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIALDIARGMEYIHSQ 303
++K + ++ E+L + L+ ++ +PLP + + + +G+ + HS
Sbjct: 63 IVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 121
Query: 304 GVIHRDLKPENVLIDQEFHLKIADFGIA-CEEVYCDALSDDPGTYRWMAPE-MIKHKSYG 361
V+HRDLKP+N+LI+ E +K+ADFG+A V + + T + APE ++ K Y
Sbjct: 122 RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYS 181
Query: 362 RKVDVYSFGLILWEMVA 378
VD++S G I EMV
Sbjct: 182 TAVDIWSLGCIFAEMVT 198
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 61/197 (30%), Positives = 103/197 (52%), Gaps = 11/197 (5%)
Query: 186 RFAHGAHSRLYHGIYK--DEPVAVKIIRIPDDDENETLAARLEKQFNREVALLSRLHNPN 243
+ G + +Y K E VA+K IR+ D E E + + RE++LL L++PN
Sbjct: 10 KIGEGTYGVVYKARNKLTGEVVALKKIRL--DTETEGVPSTA----IREISLLKELNHPN 63
Query: 244 VIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIALDIARGMEYIHSQ 303
++K + ++ E+L + L+ ++ +PLP + + + +G+ + HS
Sbjct: 64 IVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 122
Query: 304 GVIHRDLKPENVLIDQEFHLKIADFGIA-CEEVYCDALSDDPGTYRWMAPE-MIKHKSYG 361
V+HRDLKP+N+LI+ E +K+ADFG+A V + + T + APE ++ K Y
Sbjct: 123 RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYS 182
Query: 362 RKVDVYSFGLILWEMVA 378
VD++S G I EMV
Sbjct: 183 TAVDIWSLGCIFAEMVT 199
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 68/248 (27%), Positives = 118/248 (47%), Gaps = 18/248 (7%)
Query: 208 KIIRIPDDDENETLAARL-----------EKQFNREVALLSRLHNPNVIKFVAACKKPPV 256
K I D D E A ++ ++ + E+++ L + +V+ F +
Sbjct: 32 KCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDF 91
Query: 257 YCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIALDIARGMEYIHSQGVIHRDLKPENVL 316
V+ E SL LHK K L P+ I G +Y+H VIHRDLK N+
Sbjct: 92 VFVVLELCRRRSLLE-LHK-RRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLF 149
Query: 317 IDQEFHLKIADFGIACEEVY-CDALSDDPGTYRWMAPEMIKHKSYGRKVDVYSFGLILWE 375
++++ +KI DFG+A + Y + GT ++APE++ K + +VDV+S G I++
Sbjct: 150 LNEDLEVKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYT 209
Query: 376 MVAGTIPYEEMNPIQAAFAVVNKNLRPAIPGDCPPAMAALIEQCWSLQPDKRPEFWHIVK 435
++ G P+ E + ++ + + KN +IP P A+LI++ P RP ++
Sbjct: 210 LLVGKPPF-ETSCLKETYLRIKKN-EYSIPKHINPVAASLIQKMLQTDPTARPTINELLN 267
Query: 436 VLEQFETS 443
++F TS
Sbjct: 268 --DEFFTS 273
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 100/197 (50%), Gaps = 23/197 (11%)
Query: 206 AVKII--------RIPDDDENETLAARLEKQFNREVALLSRLHNPNVIKFVAACKKPPVY 257
A+K+I R DD++N + ++ E++LL L +PN+IK + +
Sbjct: 65 AIKVIKKSQFDKGRYSDDNKN---IEKFHEEIYNEISLLKSLDHPNIIKLFDVFEDKKYF 121
Query: 258 CVITEYLSEGSLRAYL---HKLEHKTLPLPKLIAIALDIARGMEYIHSQGVIHRDLKPEN 314
++TE+ G L + HK + I I G+ Y+H ++HRD+KPEN
Sbjct: 122 YLVTEFYEGGELFEQIINRHKFDECDAA-----NIMKQILSGICYLHKHNIVHRDIKPEN 176
Query: 315 VLIDQE---FHLKIADFGIACEEVYCDALSDDPGTYRWMAPEMIKHKSYGRKVDVYSFGL 371
+L++ + ++KI DFG++ L D GT ++APE++K K Y K DV+S G+
Sbjct: 177 ILLENKNSLLNIKIVDFGLSSFFSKDYKLRDRLGTAYYIAPEVLK-KKYNEKCDVWSCGV 235
Query: 372 ILWEMVAGTIPYEEMNP 388
I++ ++ G P+ N
Sbjct: 236 IMYILLCGYPPFGGQND 252
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 62/197 (31%), Positives = 102/197 (51%), Gaps = 11/197 (5%)
Query: 186 RFAHGAHSRLYHGIYK--DEPVAVKIIRIPDDDENETLAARLEKQFNREVALLSRLHNPN 243
+ G + +Y K E VA+K IR+ D E E + + RE++LL L++PN
Sbjct: 10 KIGEGTYGVVYKARNKLTGEVVALKKIRL--DTETEGVPSTA----IREISLLKELNHPN 63
Query: 244 VIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIALDIARGMEYIHSQ 303
++K + ++ E+L + L+ ++ +PLP + + + +G+ + HS
Sbjct: 64 IVKLLDVIHTENKLYLVFEFLHQ-DLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 122
Query: 304 GVIHRDLKPENVLIDQEFHLKIADFGIA-CEEVYCDALSDDPGTYRWMAPE-MIKHKSYG 361
V+HRDLKPEN+LI+ E +K+ADFG+A V + T + APE ++ K Y
Sbjct: 123 RVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYS 182
Query: 362 RKVDVYSFGLILWEMVA 378
VD++S G I EMV
Sbjct: 183 TAVDIWSLGCIFAEMVT 199
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 108/222 (48%), Gaps = 17/222 (7%)
Query: 186 RFAHGAHSRLYHGIYKDEPV--AVKIIRIPDDDENETLAARLEKQFNREVALLSRLHNPN 243
GA ++Y K+ A K+I ++E E + E+ +L+ +P
Sbjct: 18 ELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELE--------DYIVEIEILATCDHPY 69
Query: 244 VIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIALDIARGMEYIHSQ 303
++K + A ++ E+ G++ A + +L+ + L P++ + + + ++HS+
Sbjct: 70 IVKLLGAYYHDGKLWIMIEFCPGGAVDAIMLELD-RGLTEPQIQVVCRQMLEALNFLHSK 128
Query: 304 GVIHRDLKPENVLIDQEFHLKIADFGIACEEVYCDALSDD-PGTYRWMAPEMI-----KH 357
+IHRDLK NVL+ E +++ADFG++ + + D GT WMAPE++ K
Sbjct: 129 RIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSFIGTPYWMAPEVVMCETMKD 188
Query: 358 KSYGRKVDVYSFGLILWEMVAGTIPYEEMNPIQAAFAVVNKN 399
Y K D++S G+ L EM P+ E+NP++ + +
Sbjct: 189 TPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSD 230
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/248 (27%), Positives = 118/248 (47%), Gaps = 18/248 (7%)
Query: 208 KIIRIPDDDENETLAARL-----------EKQFNREVALLSRLHNPNVIKFVAACKKPPV 256
K I D D E A ++ ++ + E+++ L + +V+ F +
Sbjct: 32 KCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDF 91
Query: 257 YCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIALDIARGMEYIHSQGVIHRDLKPENVL 316
V+ E SL LHK K L P+ I G +Y+H VIHRDLK N+
Sbjct: 92 VFVVLELCRRRSLLE-LHK-RRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLF 149
Query: 317 IDQEFHLKIADFGIACEEVY-CDALSDDPGTYRWMAPEMIKHKSYGRKVDVYSFGLILWE 375
++++ +KI DFG+A + Y + GT ++APE++ K + +VDV+S G I++
Sbjct: 150 LNEDLEVKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYT 209
Query: 376 MVAGTIPYEEMNPIQAAFAVVNKNLRPAIPGDCPPAMAALIEQCWSLQPDKRPEFWHIVK 435
++ G P+ E + ++ + + KN +IP P A+LI++ P RP ++
Sbjct: 210 LLVGKPPF-ETSCLKETYLRIKKN-EYSIPKHINPVAASLIQKMLQTDPTARPTINELLN 267
Query: 436 VLEQFETS 443
++F TS
Sbjct: 268 --DEFFTS 273
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 106/207 (51%), Gaps = 11/207 (5%)
Query: 176 VDLSQLFLGLRFAHGAHSRLYHGIYK--DEPVAVKIIRIPDDDENETLAARLEKQFNREV 233
VD+ + G + +Y K E VA+K IR+ D E E + + RE+
Sbjct: 4 VDMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRL--DTETEGVPSTA----IREI 57
Query: 234 ALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIALDI 293
+LL L++PN++K + ++ E+L + L+ ++ +PLP + + +
Sbjct: 58 SLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQL 116
Query: 294 ARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIA-CEEVYCDALSDDPGTYRWMAP 352
+G+ + HS V+HRDLKP+N+LI+ E +K+ADFG+A V + + T + AP
Sbjct: 117 LQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAP 176
Query: 353 E-MIKHKSYGRKVDVYSFGLILWEMVA 378
E ++ K Y VD++S G I EMV
Sbjct: 177 EILLGCKYYSTAVDIWSLGCIFAEMVT 203
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/197 (31%), Positives = 102/197 (51%), Gaps = 11/197 (5%)
Query: 186 RFAHGAHSRLYHGIYK--DEPVAVKIIRIPDDDENETLAARLEKQFNREVALLSRLHNPN 243
+ G + +Y K E VA+K IR+ D E E + + RE++LL L++PN
Sbjct: 12 KIGEGTYGVVYKARNKLTGEVVALKKIRL--DTETEGVPSTA----IREISLLKELNHPN 65
Query: 244 VIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIALDIARGMEYIHSQ 303
++K + ++ E+LS L+ ++ +PLP + + + +G+ + HS
Sbjct: 66 IVKLLDVIHTENKLYLVFEFLSM-DLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 124
Query: 304 GVIHRDLKPENVLIDQEFHLKIADFGIA-CEEVYCDALSDDPGTYRWMAPE-MIKHKSYG 361
V+HRDLKP+N+LI+ E +K+ADFG+A V + T + APE ++ K Y
Sbjct: 125 RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYS 184
Query: 362 RKVDVYSFGLILWEMVA 378
VD++S G I EMV
Sbjct: 185 TAVDIWSLGCIFAEMVT 201
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/197 (30%), Positives = 102/197 (51%), Gaps = 11/197 (5%)
Query: 186 RFAHGAHSRLYHGIYK--DEPVAVKIIRIPDDDENETLAARLEKQFNREVALLSRLHNPN 243
+ G + +Y K E VA+K IR+ D E E + + RE++LL L++PN
Sbjct: 13 KIGEGTYGVVYKARNKLTGEVVALKKIRL--DTETEGVPSTA----IREISLLKELNHPN 66
Query: 244 VIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIALDIARGMEYIHSQ 303
++K + ++ E+L + L+ ++ +PLP + + + +G+ + HS
Sbjct: 67 IVKLLDVIHTENKLYLVFEFLHQ-DLKTFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 125
Query: 304 GVIHRDLKPENVLIDQEFHLKIADFGIA-CEEVYCDALSDDPGTYRWMAPE-MIKHKSYG 361
V+HRDLKP+N+LI+ E +K+ADFG+A V + T + APE ++ K Y
Sbjct: 126 RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYS 185
Query: 362 RKVDVYSFGLILWEMVA 378
VD++S G I EMV
Sbjct: 186 TAVDIWSLGCIFAEMVT 202
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/197 (31%), Positives = 102/197 (51%), Gaps = 11/197 (5%)
Query: 186 RFAHGAHSRLYHGIYK--DEPVAVKIIRIPDDDENETLAARLEKQFNREVALLSRLHNPN 243
+ G + +Y K E VA+K IR+ D E E + + RE++LL L++PN
Sbjct: 13 KIGEGTYGVVYKARNKLTGEVVALKKIRL--DTETEGVPSTA----IREISLLKELNHPN 66
Query: 244 VIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIALDIARGMEYIHSQ 303
++K + ++ E+LS L+ ++ +PLP + + + +G+ + HS
Sbjct: 67 IVKLLDVIHTENKLYLVFEFLSM-DLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 125
Query: 304 GVIHRDLKPENVLIDQEFHLKIADFGIA-CEEVYCDALSDDPGTYRWMAPE-MIKHKSYG 361
V+HRDLKP+N+LI+ E +K+ADFG+A V + T + APE ++ K Y
Sbjct: 126 RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYS 185
Query: 362 RKVDVYSFGLILWEMVA 378
VD++S G I EMV
Sbjct: 186 TAVDIWSLGCIFAEMVT 202
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 102/205 (49%), Gaps = 9/205 (4%)
Query: 225 LEKQFNREVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLP 284
+E Q RE+ + + LH+PN+++ +I EY G L L K T
Sbjct: 66 VEHQLRREIEIQAHLHHPNILRLYNYFYDRRRIYLILEYAPRGELYKELQK--SCTFDEQ 123
Query: 285 KLIAIALDIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIACEEVYCDALSDDP 344
+ I ++A + Y H + VIHRD+KPEN+L+ + LKIADFG + V+ +L
Sbjct: 124 RTATIMEELADALMYCHGKKVIHRDIKPENLLLGLKGELKIADFGWS---VHAPSLRRKT 180
Query: 345 --GTYRWMAPEMIKHKSYGRKVDVYSFGLILWEMVAGTIPYEEMNPIQAAFAVVNKNLRP 402
GT ++ PEMI+ + + KVD++ G++ +E++ G P+E + + +V +L+
Sbjct: 181 MCGTLDYLPPEMIEGRMHNEKVDLWCIGVLCYELLVGNPPFESASHNETYRRIVKVDLK- 239
Query: 403 AIPGDCPPAMAALIEQCWSLQPDKR 427
P P LI + P +R
Sbjct: 240 -FPASVPTGAQDLISKLLRHNPSER 263
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 90/175 (51%), Gaps = 14/175 (8%)
Query: 232 EVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIAL 291
E +L ++ P + K + K ++ EY G + ++L ++ P + A
Sbjct: 92 EKRILQAVNFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPHARFYAA-- 149
Query: 292 DIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIACEE-----VYCDALSDDPGT 346
I EY+HS +I+RDLKPEN++IDQ+ ++K+ DFG A C GT
Sbjct: 150 QIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLC-------GT 202
Query: 347 YRWMAPEMIKHKSYGRKVDVYSFGLILWEMVAGTIPYEEMNPIQAAFAVVNKNLR 401
++APE+I K Y + VD ++ G++++EM AG P+ PIQ +V+ +R
Sbjct: 203 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR 257
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 104/215 (48%), Gaps = 18/215 (8%)
Query: 190 GAHSRLYHGIYKDEPV--AVKIIRIPDDDENETLAARLEKQFNREVALLSRLHNPNVIKF 247
G ++Y K+ V A K+I ++E E + E+ +L+ +PN++K
Sbjct: 21 GDFGKVYKAQNKETSVLAAAKVIDTKSEEELE--------DYMVEIDILASCDHPNIVKL 72
Query: 248 VAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIALDIARGMEYIHSQGVIH 307
+ A ++ E+ + G++ A + +LE + L ++ + + Y+H +IH
Sbjct: 73 LDAFYYENNLWILIEFCAGGAVDAVMLELE-RPLTESQIQVVCKQTLDALNYLHDNKIIH 131
Query: 308 RDLKPENVLIDQEFHLKIADFGIACEEVYCDALSDDP--GTYRWMAPEMI-----KHKSY 360
RDLK N+L + +K+ADFG++ + D GT WMAPE++ K + Y
Sbjct: 132 RDLKAGNILFTLDGDIKLADFGVSAKNTRTXIQRRDSFIGTPYWMAPEVVMCETSKDRPY 191
Query: 361 GRKVDVYSFGLILWEMVAGTIPYEEMNPIQAAFAV 395
K DV+S G+ L EM P+ E+NP++ +
Sbjct: 192 DYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKI 226
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/248 (27%), Positives = 118/248 (47%), Gaps = 18/248 (7%)
Query: 208 KIIRIPDDDENETLAARL-----------EKQFNREVALLSRLHNPNVIKFVAACKKPPV 256
K I D D E A ++ ++ + E+++ L + +V+ F +
Sbjct: 36 KCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDF 95
Query: 257 YCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIALDIARGMEYIHSQGVIHRDLKPENVL 316
V+ E SL LHK K L P+ I G +Y+H VIHRDLK N+
Sbjct: 96 VFVVLELCRRRSLLE-LHK-RRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLF 153
Query: 317 IDQEFHLKIADFGIACEEVY-CDALSDDPGTYRWMAPEMIKHKSYGRKVDVYSFGLILWE 375
++++ +KI DFG+A + Y + GT ++APE++ K + +VDV+S G I++
Sbjct: 154 LNEDLEVKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYT 213
Query: 376 MVAGTIPYEEMNPIQAAFAVVNKNLRPAIPGDCPPAMAALIEQCWSLQPDKRPEFWHIVK 435
++ G P+ E + ++ + + KN +IP P A+LI++ P RP ++
Sbjct: 214 LLVGKPPF-ETSCLKETYLRIKKN-EYSIPKHINPVAASLIQKMLQTDPTARPTINELLN 271
Query: 436 VLEQFETS 443
++F TS
Sbjct: 272 --DEFFTS 277
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 93/179 (51%), Gaps = 7/179 (3%)
Query: 225 LEKQFNREVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLP 284
+E Q RE+ + S L +PN+++ ++ E+ G L L K H
Sbjct: 57 VEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQK--HGRFDEQ 114
Query: 285 KLIAIALDIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIACEEVYCDALSDDP 344
+ ++A + Y H + VIHRD+KPEN+L+ + LKIADFG + V+ +L
Sbjct: 115 RSATFMEELADALHYCHERKVIHRDIKPENLLMGYKGELKIADFGWS---VHAPSLRRRX 171
Query: 345 --GTYRWMAPEMIKHKSYGRKVDVYSFGLILWEMVAGTIPYEEMNPIQAAFAVVNKNLR 401
GT ++ PEMI+ K++ KVD++ G++ +E + G P++ + + +VN +L+
Sbjct: 172 MCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVDLK 230
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/259 (25%), Positives = 121/259 (46%), Gaps = 30/259 (11%)
Query: 187 FAHGAHSRLYHGIYKDE------PVAVKIIRIPDDDENETLAARLEKQFNREVALLSRLH 240
G ++ G++ E PV +K+I D ++ A + + L
Sbjct: 21 LGSGVFGTVHKGVWIPEGESIKIPVCIKVIE--DKSGRQSFQAVTDHMLA-----IGSLD 73
Query: 241 NPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIA-IALDIARGMEY 299
+ ++++ + C + ++T+YL GSL H +H+ P+L+ + IA+GM Y
Sbjct: 74 HAHIVRLLGLCPGSSLQ-LVTQYLPLGSLLD--HVRQHRGALGPQLLLNWGVQIAKGMYY 130
Query: 300 IHSQGVIHRDLKPENVLIDQEFHLKIADFGIA-------CEEVYCDALSDDPGTYRWMAP 352
+ G++HR+L NVL+ +++ADFG+A + +Y +A + +WMA
Sbjct: 131 LEEHGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKT----PIKWMAL 186
Query: 353 EMIKHKSYGRKVDVYSFGLILWE-MVAGTIPYEEMNPIQAAFAVVNKNLRPAIPGDCPPA 411
E I Y + DV+S+G+ +WE M G PY + + ++ K R A P C
Sbjct: 187 ESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLR-LAEVPDLLEKGERLAQPQICTID 245
Query: 412 MAALIEQCWSLQPDKRPEF 430
+ ++ +CW + + RP F
Sbjct: 246 VYMVMVKCWMIDENIRPTF 264
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 93/179 (51%), Gaps = 7/179 (3%)
Query: 225 LEKQFNREVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLP 284
+E Q RE+ + S L +PN+++ ++ E+ G L L K H
Sbjct: 58 VEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQK--HGRFDEQ 115
Query: 285 KLIAIALDIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIACEEVYCDALSDDP 344
+ ++A + Y H + VIHRD+KPEN+L+ + LKIADFG + V+ +L
Sbjct: 116 RSATFMEELADALHYCHERKVIHRDIKPENLLMGYKGELKIADFGWS---VHAPSLRRRX 172
Query: 345 --GTYRWMAPEMIKHKSYGRKVDVYSFGLILWEMVAGTIPYEEMNPIQAAFAVVNKNLR 401
GT ++ PEMI+ K++ KVD++ G++ +E + G P++ + + +VN +L+
Sbjct: 173 MCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVDLK 231
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/197 (30%), Positives = 102/197 (51%), Gaps = 11/197 (5%)
Query: 186 RFAHGAHSRLYHGIYK--DEPVAVKIIRIPDDDENETLAARLEKQFNREVALLSRLHNPN 243
+ G + +Y K E VA+K IR+ D E E + + RE++LL L++PN
Sbjct: 12 KIGEGTYGVVYKARNKLTGEVVALKKIRL--DTETEGVPSTA----IREISLLKELNHPN 65
Query: 244 VIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIALDIARGMEYIHSQ 303
++K + ++ E+L + L+ ++ +PLP + + + +G+ + HS
Sbjct: 66 IVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 124
Query: 304 GVIHRDLKPENVLIDQEFHLKIADFGIA-CEEVYCDALSDDPGTYRWMAPE-MIKHKSYG 361
V+HRDLKP+N+LI+ E +K+ADFG+A V + T + APE ++ K Y
Sbjct: 125 RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYS 184
Query: 362 RKVDVYSFGLILWEMVA 378
VD++S G I EMV
Sbjct: 185 TAVDIWSLGCIFAEMVT 201
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/197 (30%), Positives = 102/197 (51%), Gaps = 11/197 (5%)
Query: 186 RFAHGAHSRLYHGIYK--DEPVAVKIIRIPDDDENETLAARLEKQFNREVALLSRLHNPN 243
+ G + +Y K E VA+K IR+ D E E + + RE++LL L++PN
Sbjct: 10 KIGEGTYGVVYKARNKLTGEVVALKKIRL--DTETEGVPSTA----IREISLLKELNHPN 63
Query: 244 VIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIALDIARGMEYIHSQ 303
++K + ++ E+L + L+ ++ +PLP + + + +G+ + HS
Sbjct: 64 IVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 122
Query: 304 GVIHRDLKPENVLIDQEFHLKIADFGIA-CEEVYCDALSDDPGTYRWMAPE-MIKHKSYG 361
V+HRDLKP+N+LI+ E +K+ADFG+A V + T + APE ++ K Y
Sbjct: 123 RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYS 182
Query: 362 RKVDVYSFGLILWEMVA 378
VD++S G I EMV
Sbjct: 183 TAVDIWSLGCIFAEMVT 199
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/255 (27%), Positives = 119/255 (46%), Gaps = 32/255 (12%)
Query: 208 KIIRIPDDDENETLAARL-----------EKQFNREVALLSRLHNPNVIKFVAACKKPPV 256
K I D D E A ++ ++ + E+++ L + +V+ F +
Sbjct: 30 KCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDF 89
Query: 257 YCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIALDIARGMEYIHSQGVIHRDLKPENVL 316
V+ E SL LHK K L P+ I G +Y+H VIHRDLK N+
Sbjct: 90 VFVVLELCRRRSLLE-LHK-RRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLF 147
Query: 317 IDQEFHLKIADFGIAC--------EEVYCDALSDDPGTYRWMAPEMIKHKSYGRKVDVYS 368
++++ +KI DFG+A ++V C GT ++APE++ K + +VDV+S
Sbjct: 148 LNEDLEVKIGDFGLATKVEYDGERKKVLC-------GTPNYIAPEVLSKKGHSFEVDVWS 200
Query: 369 FGLILWEMVAGTIPYEEMNPIQAAFAVVNKNLRPAIPGDCPPAMAALIEQCWSLQPDKRP 428
G I++ ++ G P+ E + ++ + + KN +IP P A+LI++ P RP
Sbjct: 201 IGCIMYTLLVGKPPF-ETSCLKETYLRIKKN-EYSIPKHINPVAASLIQKMLQTDPTARP 258
Query: 429 EFWHIVKVLEQFETS 443
++ ++F TS
Sbjct: 259 TINELLN--DEFFTS 271
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/197 (30%), Positives = 102/197 (51%), Gaps = 11/197 (5%)
Query: 186 RFAHGAHSRLYHGIYK--DEPVAVKIIRIPDDDENETLAARLEKQFNREVALLSRLHNPN 243
+ G + +Y K E VA+K IR+ D E E + + RE++LL L++PN
Sbjct: 11 KIGEGTYGVVYKARNKLTGEVVALKKIRL--DTETEGVPSTA----IREISLLKELNHPN 64
Query: 244 VIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIALDIARGMEYIHSQ 303
++K + ++ E+L + L+ ++ +PLP + + + +G+ + HS
Sbjct: 65 IVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 123
Query: 304 GVIHRDLKPENVLIDQEFHLKIADFGIA-CEEVYCDALSDDPGTYRWMAPE-MIKHKSYG 361
V+HRDLKP+N+LI+ E +K+ADFG+A V + T + APE ++ K Y
Sbjct: 124 RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYS 183
Query: 362 RKVDVYSFGLILWEMVA 378
VD++S G I EMV
Sbjct: 184 TAVDIWSLGCIFAEMVT 200
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 87/156 (55%), Gaps = 6/156 (3%)
Query: 231 REVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIA 290
REV LL +L +PN++K + + ++ E + G L + ++ K I
Sbjct: 70 REVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGEL--FDEIIKRKRFSEHDAARII 127
Query: 291 LDIARGMEYIHSQGVIHRDLKPENVLI---DQEFHLKIADFGIACEEVYCDALSDDPGTY 347
+ G+ Y+H ++HRDLKPEN+L+ +++ +KI DFG++ + D GT
Sbjct: 128 KQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTA 187
Query: 348 RWMAPEMIKHKSYGRKVDVYSFGLILWEMVAGTIPY 383
++APE+++ +Y K DV+S G+IL+ +++GT P+
Sbjct: 188 YYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPF 222
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/197 (30%), Positives = 102/197 (51%), Gaps = 11/197 (5%)
Query: 186 RFAHGAHSRLYHGIYK--DEPVAVKIIRIPDDDENETLAARLEKQFNREVALLSRLHNPN 243
+ G + +Y K E VA+K IR+ D E E + + RE++LL L++PN
Sbjct: 13 KIGEGTYGVVYKARNKLTGEVVALKKIRL--DTETEGVPSTA----IREISLLKELNHPN 66
Query: 244 VIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIALDIARGMEYIHSQ 303
++K + ++ E+L + L+ ++ +PLP + + + +G+ + HS
Sbjct: 67 IVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 125
Query: 304 GVIHRDLKPENVLIDQEFHLKIADFGIA-CEEVYCDALSDDPGTYRWMAPE-MIKHKSYG 361
V+HRDLKP+N+LI+ E +K+ADFG+A V + T + APE ++ K Y
Sbjct: 126 RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYS 185
Query: 362 RKVDVYSFGLILWEMVA 378
VD++S G I EMV
Sbjct: 186 TAVDIWSLGCIFAEMVT 202
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/197 (30%), Positives = 102/197 (51%), Gaps = 11/197 (5%)
Query: 186 RFAHGAHSRLYHGIYK--DEPVAVKIIRIPDDDENETLAARLEKQFNREVALLSRLHNPN 243
+ G + +Y K E VA+K IR+ D E E + + RE++LL L++PN
Sbjct: 10 KIGEGTYGVVYKARNKLTGEVVALKKIRL--DTETEGVPSTA----IREISLLKELNHPN 63
Query: 244 VIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIALDIARGMEYIHSQ 303
++K + ++ E+L + L+ ++ +PLP + + + +G+ + HS
Sbjct: 64 IVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 122
Query: 304 GVIHRDLKPENVLIDQEFHLKIADFGIA-CEEVYCDALSDDPGTYRWMAPE-MIKHKSYG 361
V+HRDLKP+N+LI+ E +K+ADFG+A V + T + APE ++ K Y
Sbjct: 123 RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYS 182
Query: 362 RKVDVYSFGLILWEMVA 378
VD++S G I EMV
Sbjct: 183 TAVDIWSLGCIFAEMVT 199
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/255 (27%), Positives = 119/255 (46%), Gaps = 32/255 (12%)
Query: 208 KIIRIPDDDENETLAARL-----------EKQFNREVALLSRLHNPNVIKFVAACKKPPV 256
K I D D E A ++ ++ + E+++ L + +V+ F +
Sbjct: 54 KCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDF 113
Query: 257 YCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIALDIARGMEYIHSQGVIHRDLKPENVL 316
V+ E SL LHK K L P+ I G +Y+H VIHRDLK N+
Sbjct: 114 VFVVLELCRRRSLLE-LHK-RRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLF 171
Query: 317 IDQEFHLKIADFGIAC--------EEVYCDALSDDPGTYRWMAPEMIKHKSYGRKVDVYS 368
++++ +KI DFG+A ++V C GT ++APE++ K + +VDV+S
Sbjct: 172 LNEDLEVKIGDFGLATKVEYDGERKKVLC-------GTPNYIAPEVLSKKGHSFEVDVWS 224
Query: 369 FGLILWEMVAGTIPYEEMNPIQAAFAVVNKNLRPAIPGDCPPAMAALIEQCWSLQPDKRP 428
G I++ ++ G P+ E + ++ + + KN +IP P A+LI++ P RP
Sbjct: 225 IGCIMYTLLVGKPPF-ETSCLKETYLRIKKN-EYSIPKHINPVAASLIQKMLQTDPTARP 282
Query: 429 EFWHIVKVLEQFETS 443
++ ++F TS
Sbjct: 283 TINELLN--DEFFTS 295
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/197 (30%), Positives = 102/197 (51%), Gaps = 11/197 (5%)
Query: 186 RFAHGAHSRLYHGIYK--DEPVAVKIIRIPDDDENETLAARLEKQFNREVALLSRLHNPN 243
+ G + +Y K E VA+K IR+ D E E + + RE++LL L++PN
Sbjct: 13 KIGEGTYGVVYKARNKLTGEVVALKKIRL--DTETEGVPSTA----IREISLLKELNHPN 66
Query: 244 VIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIALDIARGMEYIHSQ 303
++K + ++ E+L + L+ ++ +PLP + + + +G+ + HS
Sbjct: 67 IVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 125
Query: 304 GVIHRDLKPENVLIDQEFHLKIADFGIA-CEEVYCDALSDDPGTYRWMAPE-MIKHKSYG 361
V+HRDLKP+N+LI+ E +K+ADFG+A V + T + APE ++ K Y
Sbjct: 126 RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYS 185
Query: 362 RKVDVYSFGLILWEMVA 378
VD++S G I EMV
Sbjct: 186 TAVDIWSLGCIFAEMVT 202
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/197 (30%), Positives = 102/197 (51%), Gaps = 11/197 (5%)
Query: 186 RFAHGAHSRLYHGIYK--DEPVAVKIIRIPDDDENETLAARLEKQFNREVALLSRLHNPN 243
+ G + +Y K E VA+K IR+ D E E + + RE++LL L++PN
Sbjct: 12 KIGEGTYGVVYKARNKLTGEVVALKKIRL--DTETEGVPSTA----IREISLLKELNHPN 65
Query: 244 VIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIALDIARGMEYIHSQ 303
++K + ++ E+L + L+ ++ +PLP + + + +G+ + HS
Sbjct: 66 IVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 124
Query: 304 GVIHRDLKPENVLIDQEFHLKIADFGIA-CEEVYCDALSDDPGTYRWMAPE-MIKHKSYG 361
V+HRDLKP+N+LI+ E +K+ADFG+A V + T + APE ++ K Y
Sbjct: 125 RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYS 184
Query: 362 RKVDVYSFGLILWEMVA 378
VD++S G I EMV
Sbjct: 185 TAVDIWSLGCIFAEMVT 201
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 93/179 (51%), Gaps = 7/179 (3%)
Query: 225 LEKQFNREVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLP 284
+E Q RE+ + S L +PN+++ ++ E+ G L L K H
Sbjct: 57 VEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQK--HGRFDEQ 114
Query: 285 KLIAIALDIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIACEEVYCDALSDDP 344
+ ++A + Y H + VIHRD+KPEN+L+ + LKIADFG + V+ +L
Sbjct: 115 RSATFMEELADALHYCHERKVIHRDIKPENLLMGYKGELKIADFGWS---VHAPSLRRRX 171
Query: 345 --GTYRWMAPEMIKHKSYGRKVDVYSFGLILWEMVAGTIPYEEMNPIQAAFAVVNKNLR 401
GT ++ PEMI+ K++ KVD++ G++ +E + G P++ + + +VN +L+
Sbjct: 172 MCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVDLK 230
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/197 (30%), Positives = 102/197 (51%), Gaps = 11/197 (5%)
Query: 186 RFAHGAHSRLYHGIYK--DEPVAVKIIRIPDDDENETLAARLEKQFNREVALLSRLHNPN 243
+ G + +Y K E VA+K IR+ D E E + + RE++LL L++PN
Sbjct: 9 KIGEGTYGVVYKARNKLTGEVVALKKIRL--DTETEGVPSTA----IREISLLKELNHPN 62
Query: 244 VIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIALDIARGMEYIHSQ 303
++K + ++ E+L + L+ ++ +PLP + + + +G+ + HS
Sbjct: 63 IVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 121
Query: 304 GVIHRDLKPENVLIDQEFHLKIADFGIA-CEEVYCDALSDDPGTYRWMAPE-MIKHKSYG 361
V+HRDLKP+N+LI+ E +K+ADFG+A V + T + APE ++ K Y
Sbjct: 122 RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYS 181
Query: 362 RKVDVYSFGLILWEMVA 378
VD++S G I EMV
Sbjct: 182 TAVDIWSLGCIFAEMVT 198
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/197 (30%), Positives = 102/197 (51%), Gaps = 11/197 (5%)
Query: 186 RFAHGAHSRLYHGIYK--DEPVAVKIIRIPDDDENETLAARLEKQFNREVALLSRLHNPN 243
+ G + +Y K E VA+K IR+ D E E + + RE++LL L++PN
Sbjct: 10 KIGEGTYGVVYKARNKLTGEVVALKKIRL--DTETEGVPSTA----IREISLLKELNHPN 63
Query: 244 VIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIALDIARGMEYIHSQ 303
++K + ++ E+L + L+ ++ +PLP + + + +G+ + HS
Sbjct: 64 IVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 122
Query: 304 GVIHRDLKPENVLIDQEFHLKIADFGIA-CEEVYCDALSDDPGTYRWMAPE-MIKHKSYG 361
V+HRDLKP+N+LI+ E +K+ADFG+A V + T + APE ++ K Y
Sbjct: 123 RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYS 182
Query: 362 RKVDVYSFGLILWEMVA 378
VD++S G I EMV
Sbjct: 183 TAVDIWSLGCIFAEMVT 199
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/197 (30%), Positives = 102/197 (51%), Gaps = 11/197 (5%)
Query: 186 RFAHGAHSRLYHGIYK--DEPVAVKIIRIPDDDENETLAARLEKQFNREVALLSRLHNPN 243
+ G + +Y K E VA+K IR+ D E E + + RE++LL L++PN
Sbjct: 14 KIGEGTYGVVYKARNKLTGEVVALKKIRL--DTETEGVPSTA----IREISLLKELNHPN 67
Query: 244 VIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIALDIARGMEYIHSQ 303
++K + ++ E+L + L+ ++ +PLP + + + +G+ + HS
Sbjct: 68 IVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 126
Query: 304 GVIHRDLKPENVLIDQEFHLKIADFGIA-CEEVYCDALSDDPGTYRWMAPE-MIKHKSYG 361
V+HRDLKP+N+LI+ E +K+ADFG+A V + T + APE ++ K Y
Sbjct: 127 RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYS 186
Query: 362 RKVDVYSFGLILWEMVA 378
VD++S G I EMV
Sbjct: 187 TAVDIWSLGCIFAEMVT 203
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 61/197 (30%), Positives = 102/197 (51%), Gaps = 11/197 (5%)
Query: 186 RFAHGAHSRLYHGIYK--DEPVAVKIIRIPDDDENETLAARLEKQFNREVALLSRLHNPN 243
+ G + +Y K E VA+K IR+ D E E + + RE++LL L++PN
Sbjct: 10 KIGEGTYGVVYKARNKLTGEVVALKKIRL--DTETEGVPSTA----IREISLLKELNHPN 63
Query: 244 VIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIALDIARGMEYIHSQ 303
++K + ++ E+L + L+ ++ +PLP + + + +G+ + HS
Sbjct: 64 IVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 122
Query: 304 GVIHRDLKPENVLIDQEFHLKIADFGIA-CEEVYCDALSDDPGTYRWMAPE-MIKHKSYG 361
V+HRDLKP+N+LI+ E +K+ADFG+A V + T + APE ++ K Y
Sbjct: 123 RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYS 182
Query: 362 RKVDVYSFGLILWEMVA 378
VD++S G I EMV
Sbjct: 183 TAVDIWSLGCIFAEMVT 199
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 61/197 (30%), Positives = 102/197 (51%), Gaps = 11/197 (5%)
Query: 186 RFAHGAHSRLYHGIYK--DEPVAVKIIRIPDDDENETLAARLEKQFNREVALLSRLHNPN 243
+ G + +Y K E VA+K IR+ D E E + + RE++LL L++PN
Sbjct: 11 KIGEGTYGVVYKARNKLTGEVVALKKIRL--DTETEGVPSTA----IREISLLKELNHPN 64
Query: 244 VIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIALDIARGMEYIHSQ 303
++K + ++ E+L + L+ ++ +PLP + + + +G+ + HS
Sbjct: 65 IVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 123
Query: 304 GVIHRDLKPENVLIDQEFHLKIADFGIA-CEEVYCDALSDDPGTYRWMAPE-MIKHKSYG 361
V+HRDLKP+N+LI+ E +K+ADFG+A V + T + APE ++ K Y
Sbjct: 124 RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYS 183
Query: 362 RKVDVYSFGLILWEMVA 378
VD++S G I EMV
Sbjct: 184 TAVDIWSLGCIFAEMVT 200
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 69/255 (27%), Positives = 119/255 (46%), Gaps = 32/255 (12%)
Query: 208 KIIRIPDDDENETLAARL-----------EKQFNREVALLSRLHNPNVIKFVAACKKPPV 256
K I D D E A ++ ++ + E+++ L + +V+ F +
Sbjct: 56 KCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDF 115
Query: 257 YCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIALDIARGMEYIHSQGVIHRDLKPENVL 316
V+ E SL LHK K L P+ I G +Y+H VIHRDLK N+
Sbjct: 116 VFVVLELCRRRSLLE-LHK-RRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLF 173
Query: 317 IDQEFHLKIADFGIAC--------EEVYCDALSDDPGTYRWMAPEMIKHKSYGRKVDVYS 368
++++ +KI DFG+A ++V C GT ++APE++ K + +VDV+S
Sbjct: 174 LNEDLEVKIGDFGLATKVEYDGERKKVLC-------GTPNYIAPEVLSKKGHSFEVDVWS 226
Query: 369 FGLILWEMVAGTIPYEEMNPIQAAFAVVNKNLRPAIPGDCPPAMAALIEQCWSLQPDKRP 428
G I++ ++ G P+ E + ++ + + KN +IP P A+LI++ P RP
Sbjct: 227 IGCIMYTLLVGKPPF-ETSCLKETYLRIKKN-EYSIPKHINPVAASLIQKMLQTDPTARP 284
Query: 429 EFWHIVKVLEQFETS 443
++ ++F TS
Sbjct: 285 TINELLN--DEFFTS 297
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 61/197 (30%), Positives = 102/197 (51%), Gaps = 11/197 (5%)
Query: 186 RFAHGAHSRLYHGIYK--DEPVAVKIIRIPDDDENETLAARLEKQFNREVALLSRLHNPN 243
+ G + +Y K E VA+K IR+ D E E + + RE++LL L++PN
Sbjct: 9 KIGEGTYGVVYKARNKLTGEVVALKKIRL--DTETEGVPSTA----IREISLLKELNHPN 62
Query: 244 VIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIALDIARGMEYIHSQ 303
++K + ++ E+L + L+ ++ +PLP + + + +G+ + HS
Sbjct: 63 IVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 121
Query: 304 GVIHRDLKPENVLIDQEFHLKIADFGIA-CEEVYCDALSDDPGTYRWMAPE-MIKHKSYG 361
V+HRDLKP+N+LI+ E +K+ADFG+A V + T + APE ++ K Y
Sbjct: 122 RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYS 181
Query: 362 RKVDVYSFGLILWEMVA 378
VD++S G I EMV
Sbjct: 182 TAVDIWSLGCIFAEMVT 198
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 66/259 (25%), Positives = 121/259 (46%), Gaps = 30/259 (11%)
Query: 187 FAHGAHSRLYHGIYKDE------PVAVKIIRIPDDDENETLAARLEKQFNREVALLSRLH 240
G ++ G++ E PV +K+I D ++ A + + L
Sbjct: 39 LGSGVFGTVHKGVWIPEGESIKIPVCIKVIE--DKSGRQSFQAVTDHMLA-----IGSLD 91
Query: 241 NPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIA-IALDIARGMEY 299
+ ++++ + C + ++T+YL GSL H +H+ P+L+ + IA+GM Y
Sbjct: 92 HAHIVRLLGLCPGSSLQ-LVTQYLPLGSLLD--HVRQHRGALGPQLLLNWGVQIAKGMYY 148
Query: 300 IHSQGVIHRDLKPENVLIDQEFHLKIADFGIA-------CEEVYCDALSDDPGTYRWMAP 352
+ G++HR+L NVL+ +++ADFG+A + +Y +A + +WMA
Sbjct: 149 LEEHGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKT----PIKWMAL 204
Query: 353 EMIKHKSYGRKVDVYSFGLILWE-MVAGTIPYEEMNPIQAAFAVVNKNLRPAIPGDCPPA 411
E I Y + DV+S+G+ +WE M G PY + + ++ K R A P C
Sbjct: 205 ESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLR-LAEVPDLLEKGERLAQPQICTID 263
Query: 412 MAALIEQCWSLQPDKRPEF 430
+ ++ +CW + + RP F
Sbjct: 264 VYMVMVKCWMIDENIRPTF 282
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 99/195 (50%), Gaps = 7/195 (3%)
Query: 186 RFAHGAHSRLYHGIYKDEPVAVKIIRIPDDDENETLAARLEKQFNREVALLSRLHNPNVI 245
+ G + +Y K V + +I D E E + + RE++LL L++PN++
Sbjct: 10 KIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTA----IREISLLKELNHPNIV 65
Query: 246 KFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIALDIARGMEYIHSQGV 305
K + ++ E+L + L+ ++ +PLP + + + +G+ + HS V
Sbjct: 66 KLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV 124
Query: 306 IHRDLKPENVLIDQEFHLKIADFGIA-CEEVYCDALSDDPGTYRWMAPE-MIKHKSYGRK 363
+HRDLKP+N+LI+ E +K+ADFG+A V + + T + APE ++ K Y
Sbjct: 125 LHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTA 184
Query: 364 VDVYSFGLILWEMVA 378
VD++S G I EMV
Sbjct: 185 VDIWSLGCIFAEMVT 199
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 99/195 (50%), Gaps = 7/195 (3%)
Query: 186 RFAHGAHSRLYHGIYKDEPVAVKIIRIPDDDENETLAARLEKQFNREVALLSRLHNPNVI 245
+ G + +Y K V + +I D E E + + RE++LL L++PN++
Sbjct: 9 KIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTA----IREISLLKELNHPNIV 64
Query: 246 KFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIALDIARGMEYIHSQGV 305
K + ++ E+L + L+ ++ +PLP + + + +G+ + HS V
Sbjct: 65 KLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV 123
Query: 306 IHRDLKPENVLIDQEFHLKIADFGIA-CEEVYCDALSDDPGTYRWMAPE-MIKHKSYGRK 363
+HRDLKP+N+LI+ E +K+ADFG+A V + + T + APE ++ K Y
Sbjct: 124 LHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTA 183
Query: 364 VDVYSFGLILWEMVA 378
VD++S G I EMV
Sbjct: 184 VDIWSLGCIFAEMVT 198
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 54/178 (30%), Positives = 100/178 (56%), Gaps = 14/178 (7%)
Query: 260 ITEYLSEGSLRAYLHKLEHKTLPLPKLIAIALDIARGMEYIHSQGVIHRDLKPENVLIDQ 319
+ EY++ G L ++ + + LP + +I+ + Y+H +G+I+RDLK +NVL+D
Sbjct: 99 VIEYVNGGDLMFHMQR--QRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDS 156
Query: 320 EFHLKIADFGIACEEVY-CDALSDDPGTYRWMAPEMIKHKSYGRKVDVYSFGLILWEMVA 378
E H+K+ D+G+ E + D S GT ++APE+++ + YG VD ++ G++++EM+A
Sbjct: 157 EGHIKLTDYGMCKEGLRPGDTTSXFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMA 216
Query: 379 GTIPYEEM----NPIQAA----FAVV-NKNLRPAIPGDCPPAMAALIEQCWSLQPDKR 427
G P++ + NP Q F V+ K +R IP A++++ + P +R
Sbjct: 217 GRSPFDIVGSSDNPDQNTEDYLFQVILEKQIR--IPRSMSVKAASVLKSFLNKDPKER 272
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 54/178 (30%), Positives = 100/178 (56%), Gaps = 14/178 (7%)
Query: 260 ITEYLSEGSLRAYLHKLEHKTLPLPKLIAIALDIARGMEYIHSQGVIHRDLKPENVLIDQ 319
+ EY++ G L ++ + + LP + +I+ + Y+H +G+I+RDLK +NVL+D
Sbjct: 131 VIEYVNGGDLMFHMQR--QRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDS 188
Query: 320 EFHLKIADFGIACEEVY-CDALSDDPGTYRWMAPEMIKHKSYGRKVDVYSFGLILWEMVA 378
E H+K+ D+G+ E + D S GT ++APE+++ + YG VD ++ G++++EM+A
Sbjct: 189 EGHIKLTDYGMCKEGLRPGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMA 248
Query: 379 GTIPYEEM----NPIQAA----FAVV-NKNLRPAIPGDCPPAMAALIEQCWSLQPDKR 427
G P++ + NP Q F V+ K +R IP A++++ + P +R
Sbjct: 249 GRSPFDIVGSSDNPDQNTEDYLFQVILEKQIR--IPRSLSVKAASVLKSFLNKDPKER 304
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 87/160 (54%), Gaps = 6/160 (3%)
Query: 231 REVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIA 290
REV LL +L +PN++K + + ++ E + G L + + K I
Sbjct: 98 REVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGEL--FDEIISRKRFSEVDAARII 155
Query: 291 LDIARGMEYIHSQGVIHRDLKPENVLID---QEFHLKIADFGIACEEVYCDALSDDPGTY 347
+ G+ Y+H ++HRDLKPEN+L++ ++ +++I DFG++ + D GT
Sbjct: 156 RQVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTA 215
Query: 348 RWMAPEMIKHKSYGRKVDVYSFGLILWEMVAGTIPYEEMN 387
++APE++ H +Y K DV+S G+IL+ +++G P+ N
Sbjct: 216 YYIAPEVL-HGTYDEKCDVWSTGVILYILLSGCPPFNGAN 254
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 87/160 (54%), Gaps = 6/160 (3%)
Query: 231 REVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIA 290
REV LL +L +PN++K + + ++ E + G L + + K I
Sbjct: 99 REVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGEL--FDEIISRKRFSEVDAARII 156
Query: 291 LDIARGMEYIHSQGVIHRDLKPENVLID---QEFHLKIADFGIACEEVYCDALSDDPGTY 347
+ G+ Y+H ++HRDLKPEN+L++ ++ +++I DFG++ + D GT
Sbjct: 157 RQVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTA 216
Query: 348 RWMAPEMIKHKSYGRKVDVYSFGLILWEMVAGTIPYEEMN 387
++APE++ H +Y K DV+S G+IL+ +++G P+ N
Sbjct: 217 YYIAPEVL-HGTYDEKCDVWSTGVILYILLSGCPPFNGAN 255
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 67/257 (26%), Positives = 111/257 (43%), Gaps = 20/257 (7%)
Query: 181 LFLGLRFAHGAHSRLYHGIYKDEPVAVKIIRIPDDDENETLAARLEKQFNREVALLSRLH 240
L + G+ +Y G+ + V V + D L ++F E L L
Sbjct: 28 LKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQD----RKLTKSERQRFKEEAEXLKGLQ 83
Query: 241 NPNVIKFV----AACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIALDIARG 296
+PN+++F + K ++TE + G+L+ YL + K + L + I +G
Sbjct: 84 HPNIVRFYDSWESTVKGKKCIVLVTELXTSGTLKTYLKRF--KVXKIKVLRSWCRQILKG 141
Query: 297 MEYIHSQG--VIHRDLKPENVLIDQ-EFHLKIADFGIAC--EEVYCDALSDDPGTYRWMA 351
++++H++ +IHRDLK +N+ I +KI D G+A + A+ GT + A
Sbjct: 142 LQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRASFAKAV---IGTPEFXA 198
Query: 352 PEMIKHKSYGRKVDVYSFGLILWEMVAGTIPYEEMNPIQAAFAVVNKNLRPA-IPGDCPP 410
PE + K Y VDVY+FG E PY E + V ++PA P
Sbjct: 199 PEXYEEK-YDESVDVYAFGXCXLEXATSEYPYSECQNAAQIYRRVTSGVKPASFDKVAIP 257
Query: 411 AMAALIEQCWSLQPDKR 427
+ +IE C D+R
Sbjct: 258 EVKEIIEGCIRQNKDER 274
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 91/173 (52%), Gaps = 8/173 (4%)
Query: 258 CVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIALDIARGMEYIHSQ-GVIHRDLKPENVL 316
C + EY + G L + H + + +I ++Y+HS+ V++RDLK EN++
Sbjct: 224 CFVMEYANGGEL--FFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLM 281
Query: 317 IDQEFHLKIADFGIACEEVYCDALSDDP--GTYRWMAPEMIKHKSYGRKVDVYSFGLILW 374
+D++ H+KI DFG+ C+E D + GT ++APE+++ YGR VD + G++++
Sbjct: 282 LDKDGHIKITDFGL-CKEGIKDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMY 340
Query: 375 EMVAGTIPYEEMNPIQAAFAVVNKNLRPAIPGDCPPAMAALIEQCWSLQPDKR 427
EM+ G +P+ + + ++ + +R P P +L+ P +R
Sbjct: 341 EMMCGRLPFYNQDHEKLFELILMEEIR--FPRTLGPEAKSLLSGLLKKDPKQR 391
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 91/173 (52%), Gaps = 8/173 (4%)
Query: 258 CVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIALDIARGMEYIHSQ-GVIHRDLKPENVL 316
C + EY + G L + H + + +I ++Y+HS+ V++RDLK EN++
Sbjct: 227 CFVMEYANGGEL--FFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLM 284
Query: 317 IDQEFHLKIADFGIACEEVYCDALSDDP--GTYRWMAPEMIKHKSYGRKVDVYSFGLILW 374
+D++ H+KI DFG+ C+E D + GT ++APE+++ YGR VD + G++++
Sbjct: 285 LDKDGHIKITDFGL-CKEGIKDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMY 343
Query: 375 EMVAGTIPYEEMNPIQAAFAVVNKNLRPAIPGDCPPAMAALIEQCWSLQPDKR 427
EM+ G +P+ + + ++ + +R P P +L+ P +R
Sbjct: 344 EMMCGRLPFYNQDHEKLFELILMEEIR--FPRTLGPEAKSLLSGLLKKDPKQR 394
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 54/178 (30%), Positives = 100/178 (56%), Gaps = 14/178 (7%)
Query: 260 ITEYLSEGSLRAYLHKLEHKTLPLPKLIAIALDIARGMEYIHSQGVIHRDLKPENVLIDQ 319
+ EY++ G L ++ + + LP + +I+ + Y+H +G+I+RDLK +NVL+D
Sbjct: 84 VIEYVNGGDLMFHMQR--QRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDS 141
Query: 320 EFHLKIADFGIACEEVY-CDALSDDPGTYRWMAPEMIKHKSYGRKVDVYSFGLILWEMVA 378
E H+K+ D+G+ E + D S GT ++APE+++ + YG VD ++ G++++EM+A
Sbjct: 142 EGHIKLTDYGMCKEGLRPGDTTSXFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMA 201
Query: 379 GTIPYEEM----NPIQAA----FAVV-NKNLRPAIPGDCPPAMAALIEQCWSLQPDKR 427
G P++ + NP Q F V+ K +R IP A++++ + P +R
Sbjct: 202 GRSPFDIVGSSDNPDQNTEDYLFQVILEKQIR--IPRSLSVKAASVLKSFLNKDPKER 257
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 73/259 (28%), Positives = 125/259 (48%), Gaps = 42/259 (16%)
Query: 206 AVKIIRIPDDDENETLAARLEKQFNREVALLSRLHNPNVIKFVAAC-----------KKP 254
A+K IR+P N LA ++ REV L++L +P ++++ A P
Sbjct: 34 AIKRIRLP----NRELA---REKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQPSSP 86
Query: 255 PVYCVITEYLS-EGSLRAYLH---KLEHKTLPLPKLIAIALDIARGMEYIHSQGVIHRDL 310
VY I L + +L+ +++ +E + + + I L IA +E++HS+G++HRDL
Sbjct: 87 KVYLYIQMQLCRKENLKDWMNGRCTIEERERSV--CLHIFLQIAEAVEFLHSKGLMHRDL 144
Query: 311 KPENVLIDQEFHLKIADFGIAC----EEVYCDALSDDP---------GTYRWMAPEMIKH 357
KP N+ + +K+ DFG+ +E L+ P GT +M+PE I
Sbjct: 145 KPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHG 204
Query: 358 KSYGRKVDVYSFGLILWEMVAGTIPYE-EMNPIQAAFAVVNKNLRPAIPGDCPPAMAALI 416
SY KVD++S GLIL+E++ P+ +M ++ V N P P ++
Sbjct: 205 NSYSHKVDIFSLGLILFELL---YPFSTQMERVRTLTDVRNLKFPPLFTQKY-PCEYVMV 260
Query: 417 EQCWSLQPDKRPEFWHIVK 435
+ S P +RPE +I++
Sbjct: 261 QDMLSPSPMERPEAINIIE 279
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 87/160 (54%), Gaps = 6/160 (3%)
Query: 231 REVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIA 290
REV LL +L +PN++K + + ++ E + G L + + K I
Sbjct: 75 REVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGEL--FDEIISRKRFSEVDAARII 132
Query: 291 LDIARGMEYIHSQGVIHRDLKPENVLID---QEFHLKIADFGIACEEVYCDALSDDPGTY 347
+ G+ Y+H ++HRDLKPEN+L++ ++ +++I DFG++ + D GT
Sbjct: 133 RQVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTA 192
Query: 348 RWMAPEMIKHKSYGRKVDVYSFGLILWEMVAGTIPYEEMN 387
++APE++ H +Y K DV+S G+IL+ +++G P+ N
Sbjct: 193 YYIAPEVL-HGTYDEKCDVWSTGVILYILLSGCPPFNGAN 231
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 60/197 (30%), Positives = 103/197 (52%), Gaps = 11/197 (5%)
Query: 186 RFAHGAHSRLYHGIYK--DEPVAVKIIRIPDDDENETLAARLEKQFNREVALLSRLHNPN 243
+ G + +Y K E VA+K IR+ D E E + + RE++LL L++PN
Sbjct: 9 KIGEGTYGVVYKARNKLTGEVVALKKIRL--DTETEGVPSTA----IREISLLKELNHPN 62
Query: 244 VIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIALDIARGMEYIHSQ 303
++K + ++ E++ + L+ ++ +PLP + + + +G+ + HS
Sbjct: 63 IVKLLDVIHTENKLYLVFEHVHQ-DLKTFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 121
Query: 304 GVIHRDLKPENVLIDQEFHLKIADFGIA-CEEVYCDALSDDPGTYRWMAPE-MIKHKSYG 361
V+HRDLKP+N+LI+ E +K+ADFG+A V + + T + APE ++ K Y
Sbjct: 122 RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYS 181
Query: 362 RKVDVYSFGLILWEMVA 378
VD++S G I EMV
Sbjct: 182 TAVDIWSLGCIFAEMVT 198
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 54/178 (30%), Positives = 100/178 (56%), Gaps = 14/178 (7%)
Query: 260 ITEYLSEGSLRAYLHKLEHKTLPLPKLIAIALDIARGMEYIHSQGVIHRDLKPENVLIDQ 319
+ EY++ G L ++ + + LP + +I+ + Y+H +G+I+RDLK +NVL+D
Sbjct: 88 VIEYVNGGDLMFHMQR--QRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDS 145
Query: 320 EFHLKIADFGIACEEVY-CDALSDDPGTYRWMAPEMIKHKSYGRKVDVYSFGLILWEMVA 378
E H+K+ D+G+ E + D S GT ++APE+++ + YG VD ++ G++++EM+A
Sbjct: 146 EGHIKLTDYGMCKEGLRPGDTTSXFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMA 205
Query: 379 GTIPYEEM----NPIQAA----FAVV-NKNLRPAIPGDCPPAMAALIEQCWSLQPDKR 427
G P++ + NP Q F V+ K +R IP A++++ + P +R
Sbjct: 206 GRSPFDIVGSSDNPDQNTEDYLFQVILEKQIR--IPRSLSVKAASVLKSFLNKDPKER 261
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 88/160 (55%), Gaps = 6/160 (3%)
Query: 231 REVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIA 290
REV LL +L +PN++K + + ++ E + G L + ++ K I
Sbjct: 70 REVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGEL--FDEIIKRKRFSEHDAARII 127
Query: 291 LDIARGMEYIHSQGVIHRDLKPENVLI---DQEFHLKIADFGIACEEVYCDALSDDPGTY 347
+ G+ Y+H ++HRDLKPEN+L+ +++ +KI DFG++ + D GT
Sbjct: 128 KQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTA 187
Query: 348 RWMAPEMIKHKSYGRKVDVYSFGLILWEMVAGTIPYEEMN 387
++APE+++ +Y K DV+S G+IL+ +++GT P+ N
Sbjct: 188 YYIAPEVLR-GTYDEKCDVWSAGVILYILLSGTPPFYGKN 226
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 91/173 (52%), Gaps = 8/173 (4%)
Query: 258 CVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIALDIARGMEYIHSQ-GVIHRDLKPENVL 316
C + EY + G L + H + + +I ++Y+HS+ V++RDLK EN++
Sbjct: 84 CFVMEYANGGEL--FFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLM 141
Query: 317 IDQEFHLKIADFGIACEEVYCDA--LSDDPGTYRWMAPEMIKHKSYGRKVDVYSFGLILW 374
+D++ H+KI DFG+ C+E D + GT ++APE+++ YGR VD + G++++
Sbjct: 142 LDKDGHIKITDFGL-CKEGIKDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMY 200
Query: 375 EMVAGTIPYEEMNPIQAAFAVVNKNLRPAIPGDCPPAMAALIEQCWSLQPDKR 427
EM+ G +P+ + + ++ + +R P P +L+ P +R
Sbjct: 201 EMMCGRLPFYNQDHEKLFELILMEEIR--FPRTLGPEAKSLLSGLLKKDPKQR 251
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 88/160 (55%), Gaps = 6/160 (3%)
Query: 231 REVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIA 290
REV LL +L +PN++K + + ++ E + G L + ++ K I
Sbjct: 70 REVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGEL--FDEIIKRKRFSEHDAARII 127
Query: 291 LDIARGMEYIHSQGVIHRDLKPENVLI---DQEFHLKIADFGIACEEVYCDALSDDPGTY 347
+ G+ Y+H ++HRDLKPEN+L+ +++ +KI DFG++ + D GT
Sbjct: 128 KQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTA 187
Query: 348 RWMAPEMIKHKSYGRKVDVYSFGLILWEMVAGTIPYEEMN 387
++APE+++ +Y K DV+S G+IL+ +++GT P+ N
Sbjct: 188 YYIAPEVLR-GTYDEKCDVWSAGVILYILLSGTPPFYGKN 226
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 91/173 (52%), Gaps = 8/173 (4%)
Query: 258 CVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIALDIARGMEYIHSQ-GVIHRDLKPENVL 316
C + EY + G L + H + + +I ++Y+HS+ V++RDLK EN++
Sbjct: 85 CFVMEYANGGEL--FFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLM 142
Query: 317 IDQEFHLKIADFGIACEEVYCDA--LSDDPGTYRWMAPEMIKHKSYGRKVDVYSFGLILW 374
+D++ H+KI DFG+ C+E D + GT ++APE+++ YGR VD + G++++
Sbjct: 143 LDKDGHIKITDFGL-CKEGIKDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMY 201
Query: 375 EMVAGTIPYEEMNPIQAAFAVVNKNLRPAIPGDCPPAMAALIEQCWSLQPDKR 427
EM+ G +P+ + + ++ + +R P P +L+ P +R
Sbjct: 202 EMMCGRLPFYNQDHEKLFELILMEEIR--FPRTLGPEAKSLLSGLLKKDPKQR 252
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 91/173 (52%), Gaps = 8/173 (4%)
Query: 258 CVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIALDIARGMEYIHSQ-GVIHRDLKPENVL 316
C + EY + G L + H + + +I ++Y+HS+ V++RDLK EN++
Sbjct: 86 CFVMEYANGGEL--FFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLM 143
Query: 317 IDQEFHLKIADFGIACEEVYCDA--LSDDPGTYRWMAPEMIKHKSYGRKVDVYSFGLILW 374
+D++ H+KI DFG+ C+E D + GT ++APE+++ YGR VD + G++++
Sbjct: 144 LDKDGHIKITDFGL-CKEGIKDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMY 202
Query: 375 EMVAGTIPYEEMNPIQAAFAVVNKNLRPAIPGDCPPAMAALIEQCWSLQPDKR 427
EM+ G +P+ + + ++ + +R P P +L+ P +R
Sbjct: 203 EMMCGRLPFYNQDHEKLFELILMEEIR--FPRTLGPEAKSLLSGLLKKDPKQR 253
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 85.5 bits (210), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 87/160 (54%), Gaps = 6/160 (3%)
Query: 231 REVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIA 290
REV LL +L +PN++K + + ++ E + G L + + K I
Sbjct: 81 REVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGEL--FDEIISRKRFSEVDAARII 138
Query: 291 LDIARGMEYIHSQGVIHRDLKPENVLID---QEFHLKIADFGIACEEVYCDALSDDPGTY 347
+ G+ Y+H ++HRDLKPEN+L++ ++ +++I DFG++ + D GT
Sbjct: 139 RQVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTA 198
Query: 348 RWMAPEMIKHKSYGRKVDVYSFGLILWEMVAGTIPYEEMN 387
++APE++ H +Y K DV+S G+IL+ +++G P+ N
Sbjct: 199 YYIAPEVL-HGTYDEKCDVWSTGVILYILLSGCPPFNGAN 237
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 60/197 (30%), Positives = 102/197 (51%), Gaps = 11/197 (5%)
Query: 186 RFAHGAHSRLYHGIYK--DEPVAVKIIRIPDDDENETLAARLEKQFNREVALLSRLHNPN 243
+ G + +Y K E VA+K IR+ D E E + + RE++LL L++PN
Sbjct: 13 KIGEGTYGVVYKARNKLTGEVVALKKIRL--DTETEGVPSTA----IREISLLKELNHPN 66
Query: 244 VIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIALDIARGMEYIHSQ 303
++K + ++ E++ + L+ ++ +PLP + + + +G+ + HS
Sbjct: 67 IVKLLDVIHTENKLYLVFEHVDQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 125
Query: 304 GVIHRDLKPENVLIDQEFHLKIADFGIA-CEEVYCDALSDDPGTYRWMAPE-MIKHKSYG 361
V+HRDLKP+N+LI+ E +K+ADFG+A V + T + APE ++ K Y
Sbjct: 126 RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYS 185
Query: 362 RKVDVYSFGLILWEMVA 378
VD++S G I EMV
Sbjct: 186 TAVDIWSLGCIFAEMVT 202
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 66/243 (27%), Positives = 112/243 (46%), Gaps = 27/243 (11%)
Query: 174 HTVDLSQLFLGLRFAHGAHSRLYHGIYKDEPVAVKIIRIPDDDENETLAARLEKQFNREV 233
H D +L L F + L + VAVK++R D + + R F RE
Sbjct: 9 HLSDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRA-DLARDPSFYLR----FRREA 63
Query: 234 ALLSRLHNPNVIKFV----AACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAI 289
+ L++P ++ A P+ ++ EY+ +LR +H E P + I +
Sbjct: 64 QNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHT-EGPMTP-KRAIEV 121
Query: 290 ALDIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIACEEVYCDALSDDP----- 344
D + + + H G+IHRD+KP N+LI +K+ DFGIA A++D
Sbjct: 122 IADACQALNFSHQNGIIHRDVKPANILISATNAVKVVDFGIA------RAIADSGNSVXQ 175
Query: 345 -----GTYRWMAPEMIKHKSYGRKVDVYSFGLILWEMVAGTIPYEEMNPIQAAFAVVNKN 399
GT ++++PE + S + DVYS G +L+E++ G P+ +P+ A+ V ++
Sbjct: 176 TAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVRED 235
Query: 400 LRP 402
P
Sbjct: 236 PIP 238
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 90/164 (54%), Gaps = 15/164 (9%)
Query: 229 FNREVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIA 288
F E +++ ++P V++ A + ++ EY+ G L ++ + + +P
Sbjct: 122 FWEERDIMAFANSPWVVQLFCAFQDDKYLYMVMEYMPGGDL---VNLMSNYDVPEKWAKF 178
Query: 289 IALDIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIACE-----EVYCDALSDD 343
++ ++ IHS G+IHRD+KP+N+L+D+ HLK+ADFG + V+CD
Sbjct: 179 YTAEVVLALDAIHSMGLIHRDVKPDNMLLDKHGHLKLADFGTCMKMDETGMVHCDTAV-- 236
Query: 344 PGTYRWMAPEMIKHKS----YGRKVDVYSFGLILWEMVAGTIPY 383
GT +++PE++K + YGR+ D +S G+ L+EM+ G P+
Sbjct: 237 -GTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPF 279
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 80/301 (26%), Positives = 135/301 (44%), Gaps = 63/301 (20%)
Query: 190 GAHSRLYHGIYKDEPVAVKIIRIPDDDENETLAARLEKQFNREVALLSR--LHNPNVIKF 247
G + ++ G++ E VAVKI ++R E+ + RE + + L + N++ F
Sbjct: 19 GRYGEVWRGLWHGESVAVKI-----------FSSRDEQSWFRETEIYNTVLLRHDNILGF 67
Query: 248 VAAC----KKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIALDIARGMEYIH-- 301
+A+ +IT Y GSL +L + +TL + +A+ A G+ ++H
Sbjct: 68 IASDMTSRNSSTQLWLITHYHEHGSLYDFLQR---QTLEPHLALRLAVSAACGLAHLHVE 124
Query: 302 ---SQG---VIHRDLKPENVLIDQEFHLKIADFGIACEEV----YCDALSDDP--GTYRW 349
+QG + HRD K NVL+ IAD G+A Y D + ++P GT R+
Sbjct: 125 IFGTQGKPAIAHRDFKSRNVLVKSNLQCCIADLGLAVMHSQGSDYLD-IGNNPRVGTKRY 183
Query: 350 MAPEMIKHK-------SYGRKVDVYSFGLILWEMVAGTI----------PYEEMNPIQAA 392
MAPE++ + SY + D+++FGL+LWE+ TI P+ ++ P +
Sbjct: 184 MAPEVLDEQIRTDCFESY-KWTDIWAFGLVLWEIARRTIVNGIVEDYRPPFYDVVPNDPS 242
Query: 393 FAVVNKNL-----RPAIPGDCPP-----AMAALIEQCWSLQPDKRPEFWHIVKVLEQFET 442
F + K + P IP +A ++ +CW P R I K L++
Sbjct: 243 FEDMKKVVCVDQQTPTIPNRLAADPVLSGLAQMMRECWYPNPSARLTALRIKKTLQKISN 302
Query: 443 S 443
S
Sbjct: 303 S 303
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 73/282 (25%), Positives = 124/282 (43%), Gaps = 53/282 (18%)
Query: 205 VAVKIIRIPDDDENETLAARLEKQFNREVALLSRLHNPNVIKFVAACKKPPVYCVITEYL 264
VA+K DDD+ ++K RE+ LL +L + N++ + CKK + ++ E++
Sbjct: 53 VAIKKFLESDDDK------MVKKIAMREIKLLKQLRHENLVNLLEVCKKKKRWYLVFEFV 106
Query: 265 SE---GSLRAYLHKLEHKTLPLPKLIAIALDIARGMEYIHSQGVIHRDLKPENVLIDQEF 321
L + + L+++ + I G+ + HS +IHRD+KPEN+L+ Q
Sbjct: 107 DHTILDDLELFPNGLDYQVVQ-----KYLFQIINGIGFCHSHNIIHRDIKPENILVSQSG 161
Query: 322 HLKIADFGIACEEVYCDALSDDPGTYRWM-APE-MIKHKSYGRKVDVYSFGLILWEMVAG 379
+K+ DFG A + DD RW APE ++ YG+ VDV++ G ++ EM G
Sbjct: 162 VVKLCDFGFARTLAAPGEVYDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMG 221
Query: 380 T----------------------IP-YEEM---NPIQAAFAVVNKNLRPAIPGDCPPAMA 413
IP ++E+ NP+ A + R + P
Sbjct: 222 EPLFPGDSDIDQLYHIMMCLGNLIPRHQELFNKNPVFAGVRLPEIKEREPLERRYPKLSE 281
Query: 414 ALIE---QCWSLQPDKRP--------EFWHIVKVLEQFETSL 444
+I+ +C + PDKRP +F+ + E+F L
Sbjct: 282 VVIDLAKKCLHIDPDKRPFCAELLHHDFFQMDGFAERFSQEL 323
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 94/189 (49%), Gaps = 22/189 (11%)
Query: 228 QFNREVALLSRLHNPNVIKFVAACKKP----PVYCVITEYLSEGSLRAYLHKLEHKTLPL 283
+F RE + L++P ++ A + P+ ++ EY+ +LR +H E P
Sbjct: 58 RFRREAQNAAALNHPAIVAVYATGEAETPAGPLPYIVMEYVDGVTLRDIVHT-EGPMTP- 115
Query: 284 PKLIAIALDIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIACEEVYCDALSDD 343
+ I + D + + + H G+IHRD+KP N++I +K+ DFGIA A++D
Sbjct: 116 KRAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIA------RAIADS 169
Query: 344 P----------GTYRWMAPEMIKHKSYGRKVDVYSFGLILWEMVAGTIPYEEMNPIQAAF 393
GT ++++PE + S + DVYS G +L+E++ G P+ +P+ A+
Sbjct: 170 GNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAY 229
Query: 394 AVVNKNLRP 402
V ++ P
Sbjct: 230 QHVREDPIP 238
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/243 (26%), Positives = 112/243 (46%), Gaps = 27/243 (11%)
Query: 174 HTVDLSQLFLGLRFAHGAHSRLYHGIYKDEPVAVKIIRIPDDDENETLAARLEKQFNREV 233
H D +L L F + L + VAVK++R D + + R F RE
Sbjct: 9 HLSDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRA-DLARDPSFYLR----FRREA 63
Query: 234 ALLSRLHNPNVIKFV----AACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAI 289
+ L++P ++ A P+ ++ EY+ +LR +H E P + I +
Sbjct: 64 QNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHT-EGPMTP-KRAIEV 121
Query: 290 ALDIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIACEEVYCDALSDDP----- 344
D + + + H G+IHRD+KP N++I +K+ DFGIA A++D
Sbjct: 122 IADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIA------RAIADSGNSVTQ 175
Query: 345 -----GTYRWMAPEMIKHKSYGRKVDVYSFGLILWEMVAGTIPYEEMNPIQAAFAVVNKN 399
GT ++++PE + S + DVYS G +L+E++ G P+ +P+ A+ V ++
Sbjct: 176 TAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVRED 235
Query: 400 LRP 402
P
Sbjct: 236 PIP 238
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 98/187 (52%), Gaps = 14/187 (7%)
Query: 225 LEKQFNREVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLP 284
+ Q RE+ +L ++P ++ F A + E++ GSL L E K +P
Sbjct: 57 IRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLK--EAKRIPEE 114
Query: 285 KLIAIALDIARGMEYIHSQ-GVIHRDLKPENVLIDQEFHLKIADFGIACEEVYCDALSDD 343
L +++ + RG+ Y+ + ++HRD+KP N+L++ +K+ DFG++ + + D++++
Sbjct: 115 ILGKVSIAVLRGLAYLREKHQIMHRDVKPSNILVNSRGEIKLCDFGVSGQLI--DSMANS 172
Query: 344 -PGTYRWMAPEMIKHKSYGRKVDVYSFGLILWEMVAGT--IPYEEMNPIQAAFAVVNKNL 400
GT +MAPE ++ Y + D++S GL L E+ G IP + ++A F
Sbjct: 173 FVGTRSYMAPERLQGTHYSVQSDIWSMGLSLVELAVGRYPIPPPDAKELEAIFG------ 226
Query: 401 RPAIPGD 407
RP + G+
Sbjct: 227 RPVVDGE 233
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 95/188 (50%), Gaps = 15/188 (7%)
Query: 229 FNREVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIA 288
F E +++ ++P V++ A + ++ EY+ G L ++ + + +P
Sbjct: 116 FWEERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDL---VNLMSNYDVPEKWARF 172
Query: 289 IALDIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIACE-----EVYCDALSDD 343
++ ++ IHS G IHRD+KP+N+L+D+ HLK+ADFG + V CD
Sbjct: 173 YTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAV-- 230
Query: 344 PGTYRWMAPEMIKHKS----YGRKVDVYSFGLILWEMVAGTIPYEEMNPIQAAFAVVNKN 399
GT +++PE++K + YGR+ D +S G+ L+EM+ G P+ + + ++N
Sbjct: 231 -GTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHK 289
Query: 400 LRPAIPGD 407
P D
Sbjct: 290 NSLTFPDD 297
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 95/188 (50%), Gaps = 15/188 (7%)
Query: 229 FNREVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIA 288
F E +++ ++P V++ A + ++ EY+ G L ++ + + +P
Sbjct: 121 FWEERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDL---VNLMSNYDVPEKWARF 177
Query: 289 IALDIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIACE-----EVYCDALSDD 343
++ ++ IHS G IHRD+KP+N+L+D+ HLK+ADFG + V CD
Sbjct: 178 YTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAV-- 235
Query: 344 PGTYRWMAPEMIKHKS----YGRKVDVYSFGLILWEMVAGTIPYEEMNPIQAAFAVVNKN 399
GT +++PE++K + YGR+ D +S G+ L+EM+ G P+ + + ++N
Sbjct: 236 -GTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHK 294
Query: 400 LRPAIPGD 407
P D
Sbjct: 295 NSLTFPDD 302
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 95/188 (50%), Gaps = 15/188 (7%)
Query: 229 FNREVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIA 288
F E +++ ++P V++ A + ++ EY+ G L ++ + + +P
Sbjct: 121 FWEERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDL---VNLMSNYDVPEKWARF 177
Query: 289 IALDIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIACE-----EVYCDALSDD 343
++ ++ IHS G IHRD+KP+N+L+D+ HLK+ADFG + V CD
Sbjct: 178 YTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAV-- 235
Query: 344 PGTYRWMAPEMIKHKS----YGRKVDVYSFGLILWEMVAGTIPYEEMNPIQAAFAVVNKN 399
GT +++PE++K + YGR+ D +S G+ L+EM+ G P+ + + ++N
Sbjct: 236 -GTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHK 294
Query: 400 LRPAIPGD 407
P D
Sbjct: 295 NSLTFPDD 302
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 79/275 (28%), Positives = 124/275 (45%), Gaps = 46/275 (16%)
Query: 179 SQLFLGLRFAHGAHSRLYHGIYKDE--PVAVKII---RIPDDDE--NET-------LAAR 224
SQ +G G +Y GI + PVA+K + RI D E N T L +
Sbjct: 37 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 96
Query: 225 LEKQFNREVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSE-GSLRAYLHKLEHKTLPL 283
+ F+ + LL P+ FV ++P + ++++E G+L+ L +
Sbjct: 97 VSSGFSGVIRLLDWFERPD--SFVLILERPEPVQDLFDFITERGALQEELAR-------- 146
Query: 284 PKLIAIALDIARGMEYIHSQGVIHRDLKPENVLID-QEFHLKIADFGIAC---EEVYCDA 339
+ + + + H+ GV+HRD+K EN+LID LK+ DFG + VY
Sbjct: 147 ----SFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY--- 199
Query: 340 LSDDPGTYRWMAPEMIK-HKSYGRKVDVYSFGLILWEMVAGTIPYEEMNPIQAAFAVVNK 398
+D GT + PE I+ H+ +GR V+S G++L++MV G IP+E I
Sbjct: 200 -TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIGGQVF--- 255
Query: 399 NLRPAIPGDCPPAMAALIEQCWSLQPDKRPEFWHI 433
R + +C LI C +L+P RP F I
Sbjct: 256 -FRQRVSSEC----QHLIRWCLALRPSDRPTFEEI 285
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 79/275 (28%), Positives = 124/275 (45%), Gaps = 46/275 (16%)
Query: 179 SQLFLGLRFAHGAHSRLYHGIYKDE--PVAVKII---RIPDDDE--NET-------LAAR 224
SQ +G G +Y GI + PVA+K + RI D E N T L +
Sbjct: 37 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 96
Query: 225 LEKQFNREVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSE-GSLRAYLHKLEHKTLPL 283
+ F+ + LL P+ FV ++P + ++++E G+L+ L +
Sbjct: 97 VSSGFSGVIRLLDWFERPD--SFVLILERPEPVQDLFDFITERGALQEELAR-------- 146
Query: 284 PKLIAIALDIARGMEYIHSQGVIHRDLKPENVLID-QEFHLKIADFGIAC---EEVYCDA 339
+ + + + H+ GV+HRD+K EN+LID LK+ DFG + VY
Sbjct: 147 ----SFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY--- 199
Query: 340 LSDDPGTYRWMAPEMIK-HKSYGRKVDVYSFGLILWEMVAGTIPYEEMNPIQAAFAVVNK 398
+D GT + PE I+ H+ +GR V+S G++L++MV G IP+E I
Sbjct: 200 -TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIGGQVF--- 255
Query: 399 NLRPAIPGDCPPAMAALIEQCWSLQPDKRPEFWHI 433
R + +C LI C +L+P RP F I
Sbjct: 256 -FRQRVSSEC----QHLIRWCLALRPSDRPTFEEI 285
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 84/160 (52%), Gaps = 6/160 (3%)
Query: 231 REVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIA 290
REV LL +L +PN+ K + + ++ E + G L + + K I
Sbjct: 75 REVQLLKQLDHPNIXKLYEFFEDKGYFYLVGEVYTGGEL--FDEIISRKRFSEVDAARII 132
Query: 291 LDIARGMEYIHSQGVIHRDLKPENVLID---QEFHLKIADFGIACEEVYCDALSDDPGTY 347
+ G+ Y H ++HRDLKPEN+L++ ++ +++I DFG++ D GT
Sbjct: 133 RQVLSGITYXHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKXKDKIGTA 192
Query: 348 RWMAPEMIKHKSYGRKVDVYSFGLILWEMVAGTIPYEEMN 387
++APE++ H +Y K DV+S G+IL+ +++G P+ N
Sbjct: 193 YYIAPEVL-HGTYDEKCDVWSTGVILYILLSGCPPFNGAN 231
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 79/275 (28%), Positives = 124/275 (45%), Gaps = 46/275 (16%)
Query: 179 SQLFLGLRFAHGAHSRLYHGIYKDE--PVAVKII---RIPDDDE--NET-------LAAR 224
SQ +G G +Y GI + PVA+K + RI D E N T L +
Sbjct: 36 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 95
Query: 225 LEKQFNREVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSE-GSLRAYLHKLEHKTLPL 283
+ F+ + LL P+ FV ++P + ++++E G+L+ L +
Sbjct: 96 VSSGFSGVIRLLDWFERPD--SFVLILERPEPVQDLFDFITERGALQEELAR-------- 145
Query: 284 PKLIAIALDIARGMEYIHSQGVIHRDLKPENVLID-QEFHLKIADFGIAC---EEVYCDA 339
+ + + + H+ GV+HRD+K EN+LID LK+ DFG + VY
Sbjct: 146 ----SFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY--- 198
Query: 340 LSDDPGTYRWMAPEMIK-HKSYGRKVDVYSFGLILWEMVAGTIPYEEMNPIQAAFAVVNK 398
+D GT + PE I+ H+ +GR V+S G++L++MV G IP+E I
Sbjct: 199 -TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIGGQVF--- 254
Query: 399 NLRPAIPGDCPPAMAALIEQCWSLQPDKRPEFWHI 433
R + +C LI C +L+P RP F I
Sbjct: 255 -FRQRVSSEC----QHLIRWCLALRPSDRPTFEEI 284
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 93/189 (49%), Gaps = 22/189 (11%)
Query: 228 QFNREVALLSRLHNPNVIKFV----AACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPL 283
+F RE + L++P ++ A P+ ++ EY+ +LR +H E P
Sbjct: 58 RFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHT-EGPMTP- 115
Query: 284 PKLIAIALDIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIACEEVYCDALSDD 343
+ I + D + + + H G+IHRD+KP N++I +K+ DFGIA A++D
Sbjct: 116 KRAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIA------RAIADS 169
Query: 344 P----------GTYRWMAPEMIKHKSYGRKVDVYSFGLILWEMVAGTIPYEEMNPIQAAF 393
GT ++++PE + S + DVYS G +L+E++ G P+ +P+ A+
Sbjct: 170 GNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAY 229
Query: 394 AVVNKNLRP 402
V ++ P
Sbjct: 230 QHVREDPIP 238
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 111/231 (48%), Gaps = 18/231 (7%)
Query: 186 RFAHGAHSRLYHGIYKDEPVAVKIIRIPDDDENETLAARLEKQFNREVALLSRLHNPNVI 245
+ +G ++ +Y G+ K V V + + D E T + + RE++L+ L + N++
Sbjct: 12 KLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAI-----REISLMKELKHENIV 66
Query: 246 KFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLP----LPKLIAIALDIARGMEYIH 301
+ ++ E++ + L+ Y+ P L + + +G+ + H
Sbjct: 67 RLYDVIHTENKLTLVFEFM-DNDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCH 125
Query: 302 SQGVIHRDLKPENVLIDQEFHLKIADFGIA-CEEVYCDALSDDPGTYRWMAPE-MIKHKS 359
++HRDLKP+N+LI++ LK+ DFG+A + + S + T + AP+ ++ ++
Sbjct: 126 ENKILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVNTFSSEVVTLWYRAPDVLMGSRT 185
Query: 360 YGRKVDVYSFGLILWEMVA------GTIPYEEMNPIQAAFAVVNKNLRPAI 404
Y +D++S G IL EM+ GT E++ I N++L P++
Sbjct: 186 YSTSIDIWSCGCILAEMITGKPLFPGTNDEEQLKLIFDIMGTPNESLWPSV 236
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 79/275 (28%), Positives = 124/275 (45%), Gaps = 46/275 (16%)
Query: 179 SQLFLGLRFAHGAHSRLYHGIYKDE--PVAVKII---RIPDDDE--NET-------LAAR 224
SQ +G G +Y GI + PVA+K + RI D E N T L +
Sbjct: 36 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 95
Query: 225 LEKQFNREVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSE-GSLRAYLHKLEHKTLPL 283
+ F+ + LL P+ FV ++P + ++++E G+L+ L +
Sbjct: 96 VSSGFSGVIRLLDWFERPD--SFVLILERPEPVQDLFDFITERGALQEELAR-------- 145
Query: 284 PKLIAIALDIARGMEYIHSQGVIHRDLKPENVLID-QEFHLKIADFGIAC---EEVYCDA 339
+ + + + H+ GV+HRD+K EN+LID LK+ DFG + VY
Sbjct: 146 ----SFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY--- 198
Query: 340 LSDDPGTYRWMAPEMIK-HKSYGRKVDVYSFGLILWEMVAGTIPYEEMNPIQAAFAVVNK 398
+D GT + PE I+ H+ +GR V+S G++L++MV G IP+E I
Sbjct: 199 -TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIGGQVF--- 254
Query: 399 NLRPAIPGDCPPAMAALIEQCWSLQPDKRPEFWHI 433
R + +C LI C +L+P RP F I
Sbjct: 255 -FRQRVSSEC----QHLIRWCLALRPSDRPTFEEI 284
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 79/275 (28%), Positives = 124/275 (45%), Gaps = 46/275 (16%)
Query: 179 SQLFLGLRFAHGAHSRLYHGIYKDE--PVAVKII---RIPDDDE--NET-------LAAR 224
SQ +G G +Y GI + PVA+K + RI D E N T L +
Sbjct: 37 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 96
Query: 225 LEKQFNREVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSE-GSLRAYLHKLEHKTLPL 283
+ F+ + LL P+ FV ++P + ++++E G+L+ L +
Sbjct: 97 VSSGFSGVIRLLDWFERPD--SFVLILERPEPVQDLFDFITERGALQEELAR-------- 146
Query: 284 PKLIAIALDIARGMEYIHSQGVIHRDLKPENVLID-QEFHLKIADFGIAC---EEVYCDA 339
+ + + + H+ GV+HRD+K EN+LID LK+ DFG + VY
Sbjct: 147 ----SFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY--- 199
Query: 340 LSDDPGTYRWMAPEMIK-HKSYGRKVDVYSFGLILWEMVAGTIPYEEMNPIQAAFAVVNK 398
+D GT + PE I+ H+ +GR V+S G++L++MV G IP+E I
Sbjct: 200 -TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIGGQVF--- 255
Query: 399 NLRPAIPGDCPPAMAALIEQCWSLQPDKRPEFWHI 433
R + +C LI C +L+P RP F I
Sbjct: 256 -FRQRVSXEC----QHLIRWCLALRPSDRPTFEEI 285
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 58/178 (32%), Positives = 95/178 (53%), Gaps = 12/178 (6%)
Query: 205 VAVKIIRIPDDDENETLAARLEKQFNREVALLSRLHNPNVIKFVAACKKPPVYCVITEYL 264
VA+K IR+ +DE A RE++LL LH+PN++ + ++ E++
Sbjct: 48 VALKRIRLDAEDEGIPSTAI------REISLLKELHHPNIVSLIDVIHSERCLTLVFEFM 101
Query: 265 SEGSLRAYLHKLEHKTLPLPKLIAIAL-DIARGMEYIHSQGVIHRDLKPENVLIDQEFHL 323
E L+ L E+KT I I L + RG+ + H ++HRDLKP+N+LI+ + L
Sbjct: 102 -EKDLKKVLD--ENKTGLQDSQIKIYLYQLLRGVAHCHQHRILHRDLKPQNLLINSDGAL 158
Query: 324 KIADFGIA-CEEVYCDALSDDPGTYRWMAPE-MIKHKSYGRKVDVYSFGLILWEMVAG 379
K+ADFG+A + + + + T + AP+ ++ K Y VD++S G I EM+ G
Sbjct: 159 KLADFGLARAFGIPVRSYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITG 216
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 59/249 (23%), Positives = 118/249 (47%), Gaps = 51/249 (20%)
Query: 201 KDEPVAVKIIRIPDDDENETLAARLEKQFNREVALLSRLHNPNVIKFVAACKKPPVYCVI 260
+++ A++ I+I + ++ + + ++ EV L+ +LH+PN+ + + C++
Sbjct: 47 ENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYEDEQYICLV 106
Query: 261 TE-------------YLSEGSLRAYLHKLEHKTLPLP----------------------- 284
E ++ + + + + ++ + P P
Sbjct: 107 MELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQR 166
Query: 285 -KLIA-IALDIARGMEYIHSQGVIHRDLKPENVLI--DQEFHLKIADFGIACE------- 333
KLI+ I I + Y+H+QG+ HRD+KPEN L ++ F +K+ DFG++ E
Sbjct: 167 EKLISNIMRQIFSALHYLHNQGICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNG 226
Query: 334 EVYCDALSDDPGTYRWMAPEMIK--HKSYGRKVDVYSFGLILWEMVAGTIPYEEMNPIQA 391
E Y ++ GT ++APE++ ++SYG K D +S G++L ++ G +P+ +N
Sbjct: 227 EYY--GMTTKAGTPYFVAPEVLNTTNESYGPKCDAWSAGVLLHLLLMGAVPFPGVNDADT 284
Query: 392 AFAVVNKNL 400
V+NK L
Sbjct: 285 ISQVLNKKL 293
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 93/189 (49%), Gaps = 22/189 (11%)
Query: 228 QFNREVALLSRLHNPNVIKFV----AACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPL 283
+F RE + L++P ++ A P+ ++ EY+ +LR +H E P
Sbjct: 75 RFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHT-EGPMTP- 132
Query: 284 PKLIAIALDIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIACEEVYCDALSDD 343
+ I + D + + + H G+IHRD+KP N++I +K+ DFGIA A++D
Sbjct: 133 KRAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIA------RAIADS 186
Query: 344 P----------GTYRWMAPEMIKHKSYGRKVDVYSFGLILWEMVAGTIPYEEMNPIQAAF 393
GT ++++PE + S + DVYS G +L+E++ G P+ +P+ A+
Sbjct: 187 GNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAY 246
Query: 394 AVVNKNLRP 402
V ++ P
Sbjct: 247 QHVREDPIP 255
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 78/272 (28%), Positives = 123/272 (45%), Gaps = 46/272 (16%)
Query: 179 SQLFLGLRFAHGAHSRLYHGIYKDE--PVAVKII---RIPDDDE--NET-------LAAR 224
SQ +G G +Y GI + PVA+K + RI D E N T L +
Sbjct: 4 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 63
Query: 225 LEKQFNREVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSE-GSLRAYLHKLEHKTLPL 283
+ F+ + LL P+ FV ++P + ++++E G+L+ L +
Sbjct: 64 VSSGFSGVIRLLDWFERPD--SFVLILERPEPVQDLFDFITERGALQEELAR-------- 113
Query: 284 PKLIAIALDIARGMEYIHSQGVIHRDLKPENVLID-QEFHLKIADFGIAC---EEVYCDA 339
+ + + + H+ GV+HRD+K EN+LID LK+ DFG + VY
Sbjct: 114 ----SFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY--- 166
Query: 340 LSDDPGTYRWMAPEMIK-HKSYGRKVDVYSFGLILWEMVAGTIPYEEMNPIQAAFAVVNK 398
+D GT + PE I+ H+ +GR V+S G++L++MV G IP+E I
Sbjct: 167 -TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIGGQVF--- 222
Query: 399 NLRPAIPGDCPPAMAALIEQCWSLQPDKRPEF 430
R + +C LI C +L+P RP F
Sbjct: 223 -FRQRVSSEC----QHLIRWCLALRPSDRPTF 249
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 54/182 (29%), Positives = 97/182 (53%), Gaps = 14/182 (7%)
Query: 206 AVKIIRIPDDDENETLAARLEKQFNREVALLSRLHNPNVIKFVAACKKPPVYCVITEYLS 265
A+KIIR +++ + EVA+L L +PN++K + Y ++ E
Sbjct: 66 AIKIIR------KTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLVMECYK 119
Query: 266 EGSL-RAYLHKLEHKTLPLPKLIAIALDIARGMEYIHSQGVIHRDLKPENVLI---DQEF 321
G L +H+++ + +I L G+ Y+H ++HRDLKPEN+L+ +++
Sbjct: 120 GGELFDEIIHRMKFNEVDAAVIIKQVL---SGVTYLHKHNIVHRDLKPENLLLESKEKDA 176
Query: 322 HLKIADFGIACEEVYCDALSDDPGTYRWMAPEMIKHKSYGRKVDVYSFGLILWEMVAGTI 381
+KI DFG++ + + GT ++APE+++ K Y K DV+S G+IL+ ++AG
Sbjct: 177 LIKIVDFGLSAVFENQKKMKERLGTAYYIAPEVLR-KKYDEKCDVWSIGVILFILLAGYP 235
Query: 382 PY 383
P+
Sbjct: 236 PF 237
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 79/275 (28%), Positives = 124/275 (45%), Gaps = 46/275 (16%)
Query: 179 SQLFLGLRFAHGAHSRLYHGIYKDE--PVAVKII---RIPDDDE--NET-------LAAR 224
SQ +G G +Y GI + PVA+K + RI D E N T L +
Sbjct: 37 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 96
Query: 225 LEKQFNREVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSE-GSLRAYLHKLEHKTLPL 283
+ F+ + LL P+ FV ++P + ++++E G+L+ L +
Sbjct: 97 VSSGFSGVIRLLDWFERPD--SFVLILERPEPVQDLFDFITERGALQEELAR-------- 146
Query: 284 PKLIAIALDIARGMEYIHSQGVIHRDLKPENVLID-QEFHLKIADFGIAC---EEVYCDA 339
+ + + + H+ GV+HRD+K EN+LID LK+ DFG + VY
Sbjct: 147 ----SFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY--- 199
Query: 340 LSDDPGTYRWMAPEMIK-HKSYGRKVDVYSFGLILWEMVAGTIPYEEMNPIQAAFAVVNK 398
+D GT + PE I+ H+ +GR V+S G++L++MV G IP+E I
Sbjct: 200 -TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIGGQVF--- 255
Query: 399 NLRPAIPGDCPPAMAALIEQCWSLQPDKRPEFWHI 433
R + +C LI C +L+P RP F I
Sbjct: 256 -FRQRVSXEC----QHLIRWCLALRPSDRPTFEEI 285
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 58/178 (32%), Positives = 95/178 (53%), Gaps = 12/178 (6%)
Query: 205 VAVKIIRIPDDDENETLAARLEKQFNREVALLSRLHNPNVIKFVAACKKPPVYCVITEYL 264
VA+K IR+ +DE A RE++LL LH+PN++ + ++ E++
Sbjct: 48 VALKRIRLDAEDEGIPSTAI------REISLLKELHHPNIVSLIDVIHSERCLTLVFEFM 101
Query: 265 SEGSLRAYLHKLEHKTLPLPKLIAIAL-DIARGMEYIHSQGVIHRDLKPENVLIDQEFHL 323
E L+ L E+KT I I L + RG+ + H ++HRDLKP+N+LI+ + L
Sbjct: 102 -EKDLKKVLD--ENKTGLQDSQIKIYLYQLLRGVAHCHQHRILHRDLKPQNLLINSDGAL 158
Query: 324 KIADFGIA-CEEVYCDALSDDPGTYRWMAPE-MIKHKSYGRKVDVYSFGLILWEMVAG 379
K+ADFG+A + + + + T + AP+ ++ K Y VD++S G I EM+ G
Sbjct: 159 KLADFGLARAFGIPVRSYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITG 216
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 79/275 (28%), Positives = 124/275 (45%), Gaps = 46/275 (16%)
Query: 179 SQLFLGLRFAHGAHSRLYHGIYKDE--PVAVKII---RIPDDDE--NET-------LAAR 224
SQ +G G +Y GI + PVA+K + RI D E N T L +
Sbjct: 36 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 95
Query: 225 LEKQFNREVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSE-GSLRAYLHKLEHKTLPL 283
+ F+ + LL P+ FV ++P + ++++E G+L+ L +
Sbjct: 96 VSSGFSGVIRLLDWFERPD--SFVLILERPEPVQDLFDFITERGALQEELAR-------- 145
Query: 284 PKLIAIALDIARGMEYIHSQGVIHRDLKPENVLID-QEFHLKIADFGIAC---EEVYCDA 339
+ + + + H+ GV+HRD+K EN+LID LK+ DFG + VY
Sbjct: 146 ----SFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY--- 198
Query: 340 LSDDPGTYRWMAPEMIK-HKSYGRKVDVYSFGLILWEMVAGTIPYEEMNPIQAAFAVVNK 398
+D GT + PE I+ H+ +GR V+S G++L++MV G IP+E I
Sbjct: 199 -TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIGGQVF--- 254
Query: 399 NLRPAIPGDCPPAMAALIEQCWSLQPDKRPEFWHI 433
R + +C LI C +L+P RP F I
Sbjct: 255 -FRQRVSXEC----QHLIRWCLALRPSDRPTFEEI 284
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 79/275 (28%), Positives = 123/275 (44%), Gaps = 46/275 (16%)
Query: 179 SQLFLGLRFAHGAHSRLYHGIYKDE--PVAVKII---RIPDDDE--NET-------LAAR 224
SQ +G G +Y GI + PVA+K + RI D E N T L +
Sbjct: 9 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 68
Query: 225 LEKQFNREVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSE-GSLRAYLHKLEHKTLPL 283
+ F+ + LL P+ FV ++P + ++++E G+L+ L +
Sbjct: 69 VSSGFSGVIRLLDWFERPD--SFVLILERPEPVQDLFDFITERGALQEELAR-------- 118
Query: 284 PKLIAIALDIARGMEYIHSQGVIHRDLKPENVLID-QEFHLKIADFGIAC---EEVYCDA 339
+ + + + H+ GV+HRD+K EN+LID LK+ DFG + VY D
Sbjct: 119 ----SFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDF 174
Query: 340 LSDDPGTYRWMAPEMIK-HKSYGRKVDVYSFGLILWEMVAGTIPYEEMNPIQAAFAVVNK 398
GT + PE I+ H+ +GR V+S G++L++MV G IP+E I
Sbjct: 175 ----DGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVF--- 227
Query: 399 NLRPAIPGDCPPAMAALIEQCWSLQPDKRPEFWHI 433
R + +C LI C +L+P RP F I
Sbjct: 228 -FRQRVSSEC----QHLIRWCLALRPSDRPTFEEI 257
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 64/227 (28%), Positives = 99/227 (43%), Gaps = 32/227 (14%)
Query: 232 EVALLSRLHNPNVIKFVAA-------------CKKPPVYCVITEYLSEGSLRAYLHKLEH 278
EV LL+ L++ V+++ AA KK + EY G+L +H E+
Sbjct: 52 EVMLLASLNHQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHS-EN 110
Query: 279 KTLPLPKLIAIALDIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIACEEVY-- 336
+ + I + YIHSQG+IHRDLKP N+ ID+ ++KI DFG+A + V+
Sbjct: 111 LNQQRDEYWRLFRQILEALSYIHSQGIIHRDLKPMNIFIDESRNVKIGDFGLA-KNVHRS 169
Query: 337 --------------CDALSDDPGTYRWMAPEMIKHKS-YGRKVDVYSFGLILWEMVAGTI 381
D L+ GT ++A E++ Y K+D+YS G+I +EM+
Sbjct: 170 LDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIYPFS 229
Query: 382 PYEEMNPIQAAFAVVNKNLRPAIPGDCPPAMAALIEQCWSLQPDKRP 428
E I V+ P + +I P+KRP
Sbjct: 230 TGMERVNILKKLRSVSIEFPPDFDDNKMKVEKKIIRLLIDHDPNKRP 276
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 79/275 (28%), Positives = 124/275 (45%), Gaps = 46/275 (16%)
Query: 179 SQLFLGLRFAHGAHSRLYHGIYKDE--PVAVKII---RIPDDDE--NET-------LAAR 224
SQ +G G +Y GI + PVA+K + RI D E N T L +
Sbjct: 36 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 95
Query: 225 LEKQFNREVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSE-GSLRAYLHKLEHKTLPL 283
+ F+ + LL P+ FV ++P + ++++E G+L+ L +
Sbjct: 96 VSSGFSGVIRLLDWFERPD--SFVLILERPEPVQDLFDFITERGALQEELAR-------- 145
Query: 284 PKLIAIALDIARGMEYIHSQGVIHRDLKPENVLID-QEFHLKIADFGIAC---EEVYCDA 339
+ + + + H+ GV+HRD+K EN+LID LK+ DFG + VY
Sbjct: 146 ----SFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY--- 198
Query: 340 LSDDPGTYRWMAPEMIK-HKSYGRKVDVYSFGLILWEMVAGTIPYEEMNPIQAAFAVVNK 398
+D GT + PE I+ H+ +GR V+S G++L++MV G IP+E I
Sbjct: 199 -TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVF--- 254
Query: 399 NLRPAIPGDCPPAMAALIEQCWSLQPDKRPEFWHI 433
R + +C LI C +L+P RP F I
Sbjct: 255 -FRQRVSSEC----QHLIRWCLALRPSDRPTFEEI 284
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 72/259 (27%), Positives = 122/259 (47%), Gaps = 18/259 (6%)
Query: 186 RFAHGAHSRLYHGIYKDEPVAVKIIRIPDDDENETLAARLEKQFNREVALLSR-LHNPNV 244
R A+G ++ H + + +AVK IR T+ ++ +K+ ++ + R + P
Sbjct: 61 RGAYGVVEKMRH-VPSGQIMAVKRIR-------ATVNSQEQKRLLMDLDISMRTVDCPFT 112
Query: 245 IKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEH-KTLPLPKLIAIALDIARGMEYIHSQ 303
+ F A + + E + + Y ++ +T+P L IA+ I + +E++HS+
Sbjct: 113 VTFYGALFREGDVWICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSK 172
Query: 304 -GVIHRDLKPENVLIDQEFHLKIADFGIACEEVYCDALSDDPGTYRWMAPEMI----KHK 358
VIHRD+KP NVLI+ +K+ DFGI+ V A + D G +MAPE I K
Sbjct: 173 LSVIHRDVKPSNVLINALGQVKMCDFGISGYLVDSVAKTIDAGCKPYMAPERINPELNQK 232
Query: 359 SYGRKVDVYSFGLILWEMVAGTIPYEEM-NPIQAAFAVVNKNLRPAIPGDCPPA-MAALI 416
Y K D++S G+ + E+ PY+ P Q VV + P +P D A
Sbjct: 233 GYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVEEP-SPQLPADKFSAEFVDFT 291
Query: 417 EQCWSLQPDKRPEFWHIVK 435
QC +RP + +++
Sbjct: 292 SQCLKKNSKERPTYPELMQ 310
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 78/272 (28%), Positives = 122/272 (44%), Gaps = 46/272 (16%)
Query: 179 SQLFLGLRFAHGAHSRLYHGIYKDE--PVAVKII---RIPDDDE--NET-------LAAR 224
SQ +G G +Y GI + PVA+K + RI D E N T L +
Sbjct: 4 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 63
Query: 225 LEKQFNREVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSE-GSLRAYLHKLEHKTLPL 283
+ F+ + LL P+ FV ++P + ++++E G+L+ L +
Sbjct: 64 VSSGFSGVIRLLDWFERPD--SFVLILERPEPVQDLFDFITERGALQEELAR-------- 113
Query: 284 PKLIAIALDIARGMEYIHSQGVIHRDLKPENVLID-QEFHLKIADFGIAC---EEVYCDA 339
+ + + + H+ GV+HRD+K EN+LID LK+ DFG + VY D
Sbjct: 114 ----SFFWQVLEAVRHCHNXGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDF 169
Query: 340 LSDDPGTYRWMAPEMIK-HKSYGRKVDVYSFGLILWEMVAGTIPYEEMNPIQAAFAVVNK 398
GT + PE I+ H+ +GR V+S G++L++MV G IP+E I
Sbjct: 170 ----DGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVF--- 222
Query: 399 NLRPAIPGDCPPAMAALIEQCWSLQPDKRPEF 430
R + +C LI C +L+P RP F
Sbjct: 223 -FRQRVSXEC----QHLIRWCLALRPSDRPTF 249
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 79/275 (28%), Positives = 124/275 (45%), Gaps = 46/275 (16%)
Query: 179 SQLFLGLRFAHGAHSRLYHGIYKDE--PVAVKII---RIPDDDE--NET-------LAAR 224
SQ +G G +Y GI + PVA+K + RI D E N T L +
Sbjct: 51 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 110
Query: 225 LEKQFNREVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSE-GSLRAYLHKLEHKTLPL 283
+ F+ + LL P+ FV ++P + ++++E G+L+ L +
Sbjct: 111 VSSGFSGVIRLLDWFERPD--SFVLILERPEPVQDLFDFITERGALQEELAR-------- 160
Query: 284 PKLIAIALDIARGMEYIHSQGVIHRDLKPENVLID-QEFHLKIADFGIAC---EEVYCDA 339
+ + + + H+ GV+HRD+K EN+LID LK+ DFG + VY
Sbjct: 161 ----SFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY--- 213
Query: 340 LSDDPGTYRWMAPEMIK-HKSYGRKVDVYSFGLILWEMVAGTIPYEEMNPIQAAFAVVNK 398
+D GT + PE I+ H+ +GR V+S G++L++MV G IP+E I
Sbjct: 214 -TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVF--- 269
Query: 399 NLRPAIPGDCPPAMAALIEQCWSLQPDKRPEFWHI 433
R + +C LI C +L+P RP F I
Sbjct: 270 -FRQRVSSEC----QHLIRWCLALRPSDRPTFEEI 299
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 79/275 (28%), Positives = 123/275 (44%), Gaps = 46/275 (16%)
Query: 179 SQLFLGLRFAHGAHSRLYHGIYKDE--PVAVKII---RIPDDDE--NET-------LAAR 224
SQ +G G +Y GI + PVA+K + RI D E N T L +
Sbjct: 9 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 68
Query: 225 LEKQFNREVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSE-GSLRAYLHKLEHKTLPL 283
+ F+ + LL P+ FV ++P + ++++E G+L+ L +
Sbjct: 69 VSSGFSGVIRLLDWFERPD--SFVLILERPEPVQDLFDFITERGALQEELAR-------- 118
Query: 284 PKLIAIALDIARGMEYIHSQGVIHRDLKPENVLID-QEFHLKIADFGIAC---EEVYCDA 339
+ + + + H+ GV+HRD+K EN+LID LK+ DFG + VY D
Sbjct: 119 ----SFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDF 174
Query: 340 LSDDPGTYRWMAPEMIK-HKSYGRKVDVYSFGLILWEMVAGTIPYEEMNPIQAAFAVVNK 398
GT + PE I+ H+ +GR V+S G++L++MV G IP+E I
Sbjct: 175 ----DGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVF--- 227
Query: 399 NLRPAIPGDCPPAMAALIEQCWSLQPDKRPEFWHI 433
R + +C LI C +L+P RP F I
Sbjct: 228 -FRQRVSSEC----QHLIRWCLALRPSDRPTFEEI 257
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 79/275 (28%), Positives = 124/275 (45%), Gaps = 46/275 (16%)
Query: 179 SQLFLGLRFAHGAHSRLYHGIYKDE--PVAVKII---RIPDDDE--NET-------LAAR 224
SQ +G G +Y GI + PVA+K + RI D E N T L +
Sbjct: 24 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 83
Query: 225 LEKQFNREVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSE-GSLRAYLHKLEHKTLPL 283
+ F+ + LL P+ FV ++P + ++++E G+L+ L +
Sbjct: 84 VSSGFSGVIRLLDWFERPD--SFVLILERPEPVQDLFDFITERGALQEELAR-------- 133
Query: 284 PKLIAIALDIARGMEYIHSQGVIHRDLKPENVLID-QEFHLKIADFGIAC---EEVYCDA 339
+ + + + H+ GV+HRD+K EN+LID LK+ DFG + VY
Sbjct: 134 ----SFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY--- 186
Query: 340 LSDDPGTYRWMAPEMIK-HKSYGRKVDVYSFGLILWEMVAGTIPYEEMNPIQAAFAVVNK 398
+D GT + PE I+ H+ +GR V+S G++L++MV G IP+E I
Sbjct: 187 -TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVF--- 242
Query: 399 NLRPAIPGDCPPAMAALIEQCWSLQPDKRPEFWHI 433
R + +C LI C +L+P RP F I
Sbjct: 243 -FRQRVSSEC----QHLIRWCLALRPSDRPTFEEI 272
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 79/275 (28%), Positives = 124/275 (45%), Gaps = 46/275 (16%)
Query: 179 SQLFLGLRFAHGAHSRLYHGIYKDE--PVAVKII---RIPDDDE--NET-------LAAR 224
SQ +G G +Y GI + PVA+K + RI D E N T L +
Sbjct: 23 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 82
Query: 225 LEKQFNREVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSE-GSLRAYLHKLEHKTLPL 283
+ F+ + LL P+ FV ++P + ++++E G+L+ L +
Sbjct: 83 VSSGFSGVIRLLDWFERPD--SFVLILERPEPVQDLFDFITERGALQEELAR-------- 132
Query: 284 PKLIAIALDIARGMEYIHSQGVIHRDLKPENVLID-QEFHLKIADFGIAC---EEVYCDA 339
+ + + + H+ GV+HRD+K EN+LID LK+ DFG + VY
Sbjct: 133 ----SFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY--- 185
Query: 340 LSDDPGTYRWMAPEMIK-HKSYGRKVDVYSFGLILWEMVAGTIPYEEMNPIQAAFAVVNK 398
+D GT + PE I+ H+ +GR V+S G++L++MV G IP+E I
Sbjct: 186 -TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVF--- 241
Query: 399 NLRPAIPGDCPPAMAALIEQCWSLQPDKRPEFWHI 433
R + +C LI C +L+P RP F I
Sbjct: 242 -FRQRVSSEC----QHLIRWCLALRPSDRPTFEEI 271
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 94/198 (47%), Gaps = 13/198 (6%)
Query: 186 RFAHGAHSRLYHGIYK--DEPVAVKIIRIPDDDENETLAARLEKQFNREVALLSRLHNPN 243
+ G ++ +Y G K D VA+K IR+ ++ A R EV+LL L + N
Sbjct: 9 KLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIR-------EVSLLKDLKHAN 61
Query: 244 VIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIALDIARGMEYIHSQ 303
++ ++ EYL + L+ YL + + + + + RG+ Y H Q
Sbjct: 62 IVTLHDIIHTEKSLTLVFEYLDK-DLKQYLDDCGN-IINMHNVKLFLFQLLRGLAYCHRQ 119
Query: 304 GVIHRDLKPENVLIDQEFHLKIADFGIACEEVYCDALSDDPGTYRWMAPE--MIKHKSYG 361
V+HRDLKP+N+LI++ LK+ADFG+A + D+ W P ++ Y
Sbjct: 120 KVLHRDLKPQNLLINERGELKLADFGLARAKSIPTKTYDNEVVTLWYRPPDILLGSTDYS 179
Query: 362 RKVDVYSFGLILWEMVAG 379
++D++ G I +EM G
Sbjct: 180 TQIDMWGVGCIFYEMATG 197
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 52/155 (33%), Positives = 82/155 (52%), Gaps = 6/155 (3%)
Query: 231 REVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKL-EHKTLPLPKLIAI 289
RE+ +L R + NVI + + + Y+ + + L+KL + + L +
Sbjct: 90 REIQILLRFRHENVIGIRDILRASTLEAMRDVYIVQDLMETDLYKLLKSQQLSNDHICYF 149
Query: 290 ALDIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIA----CEEVYCDALSDDPG 345
I RG++YIHS V+HRDLKP N+LI+ LKI DFG+A E + L++
Sbjct: 150 LYQILRGLKYIHSANVLHRDLKPSNLLINTTCDLKICDFGLARIADPEHDHTGFLTEXVA 209
Query: 346 TYRWMAPE-MIKHKSYGRKVDVYSFGLILWEMVAG 379
T + APE M+ K Y + +D++S G IL EM++
Sbjct: 210 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN 244
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 79/275 (28%), Positives = 123/275 (44%), Gaps = 46/275 (16%)
Query: 179 SQLFLGLRFAHGAHSRLYHGIYKDE--PVAVKII---RIPDDDE--NET-------LAAR 224
SQ +G G +Y GI + PVA+K + RI D E N T L +
Sbjct: 8 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 67
Query: 225 LEKQFNREVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSE-GSLRAYLHKLEHKTLPL 283
+ F+ + LL P+ FV ++P + ++++E G+L+ L +
Sbjct: 68 VSSGFSGVIRLLDWFERPD--SFVLILERPEPVQDLFDFITERGALQEELAR-------- 117
Query: 284 PKLIAIALDIARGMEYIHSQGVIHRDLKPENVLID-QEFHLKIADFGIAC---EEVYCDA 339
+ + + + H+ GV+HRD+K EN+LID LK+ DFG + VY D
Sbjct: 118 ----SFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDF 173
Query: 340 LSDDPGTYRWMAPEMIK-HKSYGRKVDVYSFGLILWEMVAGTIPYEEMNPIQAAFAVVNK 398
GT + PE I+ H+ +GR V+S G++L++MV G IP+E I
Sbjct: 174 ----DGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVF--- 226
Query: 399 NLRPAIPGDCPPAMAALIEQCWSLQPDKRPEFWHI 433
R + +C LI C +L+P RP F I
Sbjct: 227 -FRQRVSSEC----QHLIRWCLALRPSDRPTFEEI 256
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 79/275 (28%), Positives = 124/275 (45%), Gaps = 46/275 (16%)
Query: 179 SQLFLGLRFAHGAHSRLYHGIYKDE--PVAVKII---RIPDDDE--NET-------LAAR 224
SQ +G G +Y GI + PVA+K + RI D E N T L +
Sbjct: 9 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 68
Query: 225 LEKQFNREVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSE-GSLRAYLHKLEHKTLPL 283
+ F+ + LL P+ FV ++P + ++++E G+L+ L +
Sbjct: 69 VSSGFSGVIRLLDWFERPD--SFVLILERPEPVQDLFDFITERGALQEELAR-------- 118
Query: 284 PKLIAIALDIARGMEYIHSQGVIHRDLKPENVLID-QEFHLKIADFGIAC---EEVYCDA 339
+ + + + H+ GV+HRD+K EN+LID LK+ DFG + VY
Sbjct: 119 ----SFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY--- 171
Query: 340 LSDDPGTYRWMAPEMIK-HKSYGRKVDVYSFGLILWEMVAGTIPYEEMNPIQAAFAVVNK 398
+D GT + PE I+ H+ +GR V+S G++L++MV G IP+E I
Sbjct: 172 -TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVF--- 227
Query: 399 NLRPAIPGDCPPAMAALIEQCWSLQPDKRPEFWHI 433
R + +C LI C +L+P RP F I
Sbjct: 228 -FRQRVSSEC----QHLIRWCLALRPSDRPTFEEI 257
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 79/275 (28%), Positives = 124/275 (45%), Gaps = 46/275 (16%)
Query: 179 SQLFLGLRFAHGAHSRLYHGIYKDE--PVAVKII---RIPDDDE--NET-------LAAR 224
SQ +G G +Y GI + PVA+K + RI D E N T L +
Sbjct: 43 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 102
Query: 225 LEKQFNREVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSE-GSLRAYLHKLEHKTLPL 283
+ F+ + LL P+ FV ++P + ++++E G+L+ L +
Sbjct: 103 VSSGFSGVIRLLDWFERPD--SFVLILERPEPVQDLFDFITERGALQEELAR-------- 152
Query: 284 PKLIAIALDIARGMEYIHSQGVIHRDLKPENVLID-QEFHLKIADFGIAC---EEVYCDA 339
+ + + + H+ GV+HRD+K EN+LID LK+ DFG + VY
Sbjct: 153 ----SFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY--- 205
Query: 340 LSDDPGTYRWMAPEMIK-HKSYGRKVDVYSFGLILWEMVAGTIPYEEMNPIQAAFAVVNK 398
+D GT + PE I+ H+ +GR V+S G++L++MV G IP+E I
Sbjct: 206 -TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVF--- 261
Query: 399 NLRPAIPGDCPPAMAALIEQCWSLQPDKRPEFWHI 433
R + +C LI C +L+P RP F I
Sbjct: 262 -FRQRVSSEC----QHLIRWCLALRPSDRPTFEEI 291
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 78/272 (28%), Positives = 123/272 (45%), Gaps = 46/272 (16%)
Query: 179 SQLFLGLRFAHGAHSRLYHGIYKDE--PVAVKII---RIPDDDE--NET-------LAAR 224
SQ +G G +Y GI + PVA+K + RI D E N T L +
Sbjct: 4 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 63
Query: 225 LEKQFNREVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSE-GSLRAYLHKLEHKTLPL 283
+ F+ + LL P+ FV ++P + ++++E G+L+ L +
Sbjct: 64 VSSGFSGVIRLLDWFERPD--SFVLILERPEPVQDLFDFITERGALQEELAR-------- 113
Query: 284 PKLIAIALDIARGMEYIHSQGVIHRDLKPENVLID-QEFHLKIADFGIAC---EEVYCDA 339
+ + + + H+ GV+HRD+K EN+LID LK+ DFG + VY
Sbjct: 114 ----SFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY--- 166
Query: 340 LSDDPGTYRWMAPEMIK-HKSYGRKVDVYSFGLILWEMVAGTIPYEEMNPIQAAFAVVNK 398
+D GT + PE I+ H+ +GR V+S G++L++MV G IP+E I
Sbjct: 167 -TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVF--- 222
Query: 399 NLRPAIPGDCPPAMAALIEQCWSLQPDKRPEF 430
R + +C LI C +L+P RP F
Sbjct: 223 -FRQRVSSEC----QHLIRWCLALRPSDRPTF 249
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 81.6 bits (200), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 79/275 (28%), Positives = 124/275 (45%), Gaps = 46/275 (16%)
Query: 179 SQLFLGLRFAHGAHSRLYHGIYKDE--PVAVKII---RIPDDDE--NET-------LAAR 224
SQ +G G +Y GI + PVA+K + RI D E N T L +
Sbjct: 56 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 115
Query: 225 LEKQFNREVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSE-GSLRAYLHKLEHKTLPL 283
+ F+ + LL P+ FV ++P + ++++E G+L+ L +
Sbjct: 116 VSSGFSGVIRLLDWFERPD--SFVLILERPEPVQDLFDFITERGALQEELAR-------- 165
Query: 284 PKLIAIALDIARGMEYIHSQGVIHRDLKPENVLID-QEFHLKIADFGIAC---EEVYCDA 339
+ + + + H+ GV+HRD+K EN+LID LK+ DFG + VY
Sbjct: 166 ----SFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY--- 218
Query: 340 LSDDPGTYRWMAPEMIK-HKSYGRKVDVYSFGLILWEMVAGTIPYEEMNPIQAAFAVVNK 398
+D GT + PE I+ H+ +GR V+S G++L++MV G IP+E I
Sbjct: 219 -TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVF--- 274
Query: 399 NLRPAIPGDCPPAMAALIEQCWSLQPDKRPEFWHI 433
R + +C LI C +L+P RP F I
Sbjct: 275 -FRQRVSXEC----QHLIRWCLALRPSDRPTFEEI 304
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/243 (26%), Positives = 111/243 (45%), Gaps = 27/243 (11%)
Query: 174 HTVDLSQLFLGLRFAHGAHSRLYHGIYKDEPVAVKIIRIPDDDENETLAARLEKQFNREV 233
H D +L L F + L + VAVK++R D + + R F RE
Sbjct: 9 HLSDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRA-DLARDPSFYLR----FRREA 63
Query: 234 ALLSRLHNPNVIKFV----AACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAI 289
+ L++P ++ A P+ ++ EY+ +LR +H E P + I +
Sbjct: 64 QNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHT-EGPMTP-KRAIEV 121
Query: 290 ALDIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIACEEVYCDALSDDP----- 344
D + + + H G+IHRD+KP N++I +K+ DFGIA A++D
Sbjct: 122 IADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIA------RAIADSGNSVTQ 175
Query: 345 -----GTYRWMAPEMIKHKSYGRKVDVYSFGLILWEMVAGTIPYEEMNPIQAAFAVVNKN 399
GT ++++PE + S + DVYS G +L+E++ G P+ +P A+ V ++
Sbjct: 176 TAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPDSVAYQHVRED 235
Query: 400 LRP 402
P
Sbjct: 236 PIP 238
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 78/272 (28%), Positives = 122/272 (44%), Gaps = 46/272 (16%)
Query: 179 SQLFLGLRFAHGAHSRLYHGIYKDE--PVAVKII---RIPDDDE--NET-------LAAR 224
SQ +G G +Y GI + PVA+K + RI D E N T L +
Sbjct: 7 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 66
Query: 225 LEKQFNREVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSE-GSLRAYLHKLEHKTLPL 283
+ F+ + LL P+ FV ++P + ++++E G+L+ L +
Sbjct: 67 VSSGFSGVIRLLDWFERPD--SFVLILERPEPVQDLFDFITERGALQEELAR-------- 116
Query: 284 PKLIAIALDIARGMEYIHSQGVIHRDLKPENVLID-QEFHLKIADFGIAC---EEVYCDA 339
+ + + + H+ GV+HRD+K EN+LID LK+ DFG + VY D
Sbjct: 117 ----SFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDF 172
Query: 340 LSDDPGTYRWMAPEMIK-HKSYGRKVDVYSFGLILWEMVAGTIPYEEMNPIQAAFAVVNK 398
GT + PE I+ H+ +GR V+S G++L++MV G IP+E I
Sbjct: 173 ----DGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVF--- 225
Query: 399 NLRPAIPGDCPPAMAALIEQCWSLQPDKRPEF 430
R + +C LI C +L+P RP F
Sbjct: 226 -FRQRVSSEC----QHLIRWCLALRPSDRPTF 252
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 79/275 (28%), Positives = 124/275 (45%), Gaps = 46/275 (16%)
Query: 179 SQLFLGLRFAHGAHSRLYHGIYKDE--PVAVKII---RIPDDDE--NET-------LAAR 224
SQ +G G +Y GI + PVA+K + RI D E N T L +
Sbjct: 24 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 83
Query: 225 LEKQFNREVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSE-GSLRAYLHKLEHKTLPL 283
+ F+ + LL P+ FV ++P + ++++E G+L+ L +
Sbjct: 84 VSSGFSGVIRLLDWFERPD--SFVLILERPEPVQDLFDFITERGALQEELAR-------- 133
Query: 284 PKLIAIALDIARGMEYIHSQGVIHRDLKPENVLID-QEFHLKIADFGIAC---EEVYCDA 339
+ + + + H+ GV+HRD+K EN+LID LK+ DFG + VY
Sbjct: 134 ----SFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY--- 186
Query: 340 LSDDPGTYRWMAPEMIK-HKSYGRKVDVYSFGLILWEMVAGTIPYEEMNPIQAAFAVVNK 398
+D GT + PE I+ H+ +GR V+S G++L++MV G IP+E I
Sbjct: 187 -TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVF--- 242
Query: 399 NLRPAIPGDCPPAMAALIEQCWSLQPDKRPEFWHI 433
R + +C LI C +L+P RP F I
Sbjct: 243 -FRQRVSXEC----QHLIRWCLALRPSDRPTFEEI 272
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 79/275 (28%), Positives = 124/275 (45%), Gaps = 46/275 (16%)
Query: 179 SQLFLGLRFAHGAHSRLYHGIYKDE--PVAVKII---RIPDDDE--NET-------LAAR 224
SQ +G G +Y GI + PVA+K + RI D E N T L +
Sbjct: 23 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 82
Query: 225 LEKQFNREVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSE-GSLRAYLHKLEHKTLPL 283
+ F+ + LL P+ FV ++P + ++++E G+L+ L +
Sbjct: 83 VSSGFSGVIRLLDWFERPD--SFVLILERPEPVQDLFDFITERGALQEELAR-------- 132
Query: 284 PKLIAIALDIARGMEYIHSQGVIHRDLKPENVLID-QEFHLKIADFGIAC---EEVYCDA 339
+ + + + H+ GV+HRD+K EN+LID LK+ DFG + VY
Sbjct: 133 ----SFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY--- 185
Query: 340 LSDDPGTYRWMAPEMIK-HKSYGRKVDVYSFGLILWEMVAGTIPYEEMNPIQAAFAVVNK 398
+D GT + PE I+ H+ +GR V+S G++L++MV G IP+E I
Sbjct: 186 -TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVF--- 241
Query: 399 NLRPAIPGDCPPAMAALIEQCWSLQPDKRPEFWHI 433
R + +C LI C +L+P RP F I
Sbjct: 242 -FRQRVSXEC----QHLIRWCLALRPSDRPTFEEI 271
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 79/275 (28%), Positives = 124/275 (45%), Gaps = 46/275 (16%)
Query: 179 SQLFLGLRFAHGAHSRLYHGIYKDE--PVAVKII---RIPDDDE--NET-------LAAR 224
SQ +G G +Y GI + PVA+K + RI D E N T L +
Sbjct: 51 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 110
Query: 225 LEKQFNREVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSE-GSLRAYLHKLEHKTLPL 283
+ F+ + LL P+ FV ++P + ++++E G+L+ L +
Sbjct: 111 VSSGFSGVIRLLDWFERPD--SFVLILERPEPVQDLFDFITERGALQEELAR-------- 160
Query: 284 PKLIAIALDIARGMEYIHSQGVIHRDLKPENVLID-QEFHLKIADFGIAC---EEVYCDA 339
+ + + + H+ GV+HRD+K EN+LID LK+ DFG + VY
Sbjct: 161 ----SFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY--- 213
Query: 340 LSDDPGTYRWMAPEMIK-HKSYGRKVDVYSFGLILWEMVAGTIPYEEMNPIQAAFAVVNK 398
+D GT + PE I+ H+ +GR V+S G++L++MV G IP+E I
Sbjct: 214 -TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVF--- 269
Query: 399 NLRPAIPGDCPPAMAALIEQCWSLQPDKRPEFWHI 433
R + +C LI C +L+P RP F I
Sbjct: 270 -FRQRVSXEC----QHLIRWCLALRPSDRPTFEEI 299
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 79/275 (28%), Positives = 123/275 (44%), Gaps = 46/275 (16%)
Query: 179 SQLFLGLRFAHGAHSRLYHGIYKDE--PVAVKII---RIPDDDE--NET-------LAAR 224
SQ +G G +Y GI + PVA+K + RI D E N T L +
Sbjct: 31 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 90
Query: 225 LEKQFNREVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSE-GSLRAYLHKLEHKTLPL 283
+ F+ + LL P+ FV ++P + ++++E G+L+ L +
Sbjct: 91 VSSGFSGVIRLLDWFERPD--SFVLILERPEPVQDLFDFITERGALQEELAR-------- 140
Query: 284 PKLIAIALDIARGMEYIHSQGVIHRDLKPENVLID-QEFHLKIADFGIAC---EEVYCDA 339
+ + + + H+ GV+HRD+K EN+LID LK+ DFG + VY D
Sbjct: 141 ----SFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDF 196
Query: 340 LSDDPGTYRWMAPEMIK-HKSYGRKVDVYSFGLILWEMVAGTIPYEEMNPIQAAFAVVNK 398
GT + PE I+ H+ +GR V+S G++L++MV G IP+E I
Sbjct: 197 ----DGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVF--- 249
Query: 399 NLRPAIPGDCPPAMAALIEQCWSLQPDKRPEFWHI 433
R + +C LI C +L+P RP F I
Sbjct: 250 -FRQRVSXEC----QHLIRWCLALRPSDRPTFEEI 279
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 79/275 (28%), Positives = 124/275 (45%), Gaps = 46/275 (16%)
Query: 179 SQLFLGLRFAHGAHSRLYHGIYKDE--PVAVKII---RIPDDDE--NET-------LAAR 224
SQ +G G +Y GI + PVA+K + RI D E N T L +
Sbjct: 24 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 83
Query: 225 LEKQFNREVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSE-GSLRAYLHKLEHKTLPL 283
+ F+ + LL P+ FV ++P + ++++E G+L+ L +
Sbjct: 84 VSSGFSGVIRLLDWFERPD--SFVLILERPEPVQDLFDFITERGALQEELAR-------- 133
Query: 284 PKLIAIALDIARGMEYIHSQGVIHRDLKPENVLID-QEFHLKIADFGIAC---EEVYCDA 339
+ + + + H+ GV+HRD+K EN+LID LK+ DFG + VY
Sbjct: 134 ----SFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY--- 186
Query: 340 LSDDPGTYRWMAPEMIK-HKSYGRKVDVYSFGLILWEMVAGTIPYEEMNPIQAAFAVVNK 398
+D GT + PE I+ H+ +GR V+S G++L++MV G IP+E I
Sbjct: 187 -TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVF--- 242
Query: 399 NLRPAIPGDCPPAMAALIEQCWSLQPDKRPEFWHI 433
R + +C LI C +L+P RP F I
Sbjct: 243 -FRQRVSXEC----QHLIRWCLALRPXDRPTFEEI 272
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 88/169 (52%), Gaps = 13/169 (7%)
Query: 226 EKQFNREVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPK 285
E E+A+L ++ + N++ + P ++ + +S G L ++ K K
Sbjct: 64 ESSIENEIAVLRKIKHENIVALEDIYESPNHLYLVMQLVSGGEL---FDRIVEKGFYTEK 120
Query: 286 ----LIAIALDIARGMEYIHSQGVIHRDLKPENVLI---DQEFHLKIADFGIACEEVYCD 338
LI LD + Y+H G++HRDLKPEN+L D+E + I+DFG++ E D
Sbjct: 121 DASTLIRQVLD---AVYYLHRMGIVHRDLKPENLLYYSQDEESKIMISDFGLSKMEGKGD 177
Query: 339 ALSDDPGTYRWMAPEMIKHKSYGRKVDVYSFGLILWEMVAGTIPYEEMN 387
+S GT ++APE++ K Y + VD +S G+I + ++ G P+ + N
Sbjct: 178 VMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDEN 226
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 72/262 (27%), Positives = 115/262 (43%), Gaps = 20/262 (7%)
Query: 179 SQLFLGLRFAHGAHSRLYHGIYKDEPVAVKIIRIPDDDENETLAARLEKQFNREVALLSR 238
SQ +G G +Y GI + + V I + D ++ + EV LL +
Sbjct: 8 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 67
Query: 239 LHN--PNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIALDIARG 296
+ + VI+ + ++P + +I E + E + E L + +
Sbjct: 68 VSSGFSGVIRLLDWFERPDSFVLILERM-EPVQDLFDFITERGALQEELARSFFWQVLEA 126
Query: 297 MEYIHSQGVIHRDLKPENVLID-QEFHLKIADFGIAC---EEVYCDALSDDPGTYRWMAP 352
+ + H+ GV+HRD+K EN+LID LK+ DFG + VY D GT + P
Sbjct: 127 VRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDF----DGTRVYSPP 182
Query: 353 EMIK-HKSYGRKVDVYSFGLILWEMVAGTIPYEEMNPIQAAFAVVNKNLRPAIPGDCPPA 411
E I+ H+ +GR V+S G++L++MV G IP+E I R + +C
Sbjct: 183 EWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVF----FRQRVSSEC--- 235
Query: 412 MAALIEQCWSLQPDKRPEFWHI 433
LI C +L+P RP F I
Sbjct: 236 -QHLIRWCLALRPSDRPTFEEI 256
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 106/216 (49%), Gaps = 10/216 (4%)
Query: 225 LEKQFNREVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLP 284
+ Q RE+ +L ++P ++ F A + E++ GSL L K +P
Sbjct: 66 IRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR--IPEQ 123
Query: 285 KLIAIALDIARGMEYIHSQ-GVIHRDLKPENVLIDQEFHLKIADFGIACEEVYCDALSDD 343
L +++ + +G+ Y+ + ++HRD+KP N+L++ +K+ DFG++ + + D++++
Sbjct: 124 ILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLI--DSMANS 181
Query: 344 -PGTYRWMAPEMIKHKSYGRKVDVYSFGLILWEMVAGTIPYEEMNPIQAAFAVVNKNLR- 401
GT +M+PE ++ Y + D++S GL L EM G P + A F +++ +
Sbjct: 182 FVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIGSGSGSMAIFELLDYIVNE 241
Query: 402 --PAIP-GDCPPAMAALIEQCWSLQPDKRPEFWHIV 434
P +P G + +C P +R + ++
Sbjct: 242 PPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLM 277
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/155 (32%), Positives = 83/155 (53%), Gaps = 6/155 (3%)
Query: 231 REVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKL-EHKTLPLPKLIAI 289
RE+ +L R + N+I + P + + Y+ + + L+KL + + L +
Sbjct: 74 REIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYF 133
Query: 290 ALDIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIA----CEEVYCDALSDDPG 345
I RG++YIHS V+HRDLKP N+L++ LKI DFG+A + + L++
Sbjct: 134 LYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVA 193
Query: 346 TYRWMAPE-MIKHKSYGRKVDVYSFGLILWEMVAG 379
T + APE M+ K Y + +D++S G IL EM++
Sbjct: 194 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN 228
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/155 (32%), Positives = 83/155 (53%), Gaps = 6/155 (3%)
Query: 231 REVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKL-EHKTLPLPKLIAI 289
RE+ +L R + N+I + P + + Y+ + + L+KL + + L +
Sbjct: 70 REIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYF 129
Query: 290 ALDIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIA----CEEVYCDALSDDPG 345
I RG++YIHS V+HRDLKP N+L++ LKI DFG+A + + L++
Sbjct: 130 LYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVA 189
Query: 346 TYRWMAPE-MIKHKSYGRKVDVYSFGLILWEMVAG 379
T + APE M+ K Y + +D++S G IL EM++
Sbjct: 190 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN 224
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/155 (32%), Positives = 83/155 (53%), Gaps = 6/155 (3%)
Query: 231 REVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKL-EHKTLPLPKLIAI 289
RE+ +L R + N+I + P + + Y+ + + L+KL + + L +
Sbjct: 74 REIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYF 133
Query: 290 ALDIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIA----CEEVYCDALSDDPG 345
I RG++YIHS V+HRDLKP N+L++ LKI DFG+A + + L++
Sbjct: 134 LYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVA 193
Query: 346 TYRWMAPE-MIKHKSYGRKVDVYSFGLILWEMVAG 379
T + APE M+ K Y + +D++S G IL EM++
Sbjct: 194 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN 228
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 52/155 (33%), Positives = 83/155 (53%), Gaps = 6/155 (3%)
Query: 231 REVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKL-EHKTLPLPKLIAI 289
RE+ +L R + N+I + P + + YL + A L+KL + + L +
Sbjct: 90 REIKILLRFRHENIIGINDIIRAPTIEQMKDVYLVTHLMGADLYKLLKTQHLSNDHICYF 149
Query: 290 ALDIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIA----CEEVYCDALSDDPG 345
I RG++YIHS V+HRDLKP N+L++ LKI DFG+A + + L++
Sbjct: 150 LYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVA 209
Query: 346 TYRWMAPE-MIKHKSYGRKVDVYSFGLILWEMVAG 379
T + APE M+ K Y + +D++S G IL EM++
Sbjct: 210 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN 244
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/155 (32%), Positives = 83/155 (53%), Gaps = 6/155 (3%)
Query: 231 REVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKL-EHKTLPLPKLIAI 289
RE+ +L R + N+I + P + + Y+ + + L+KL + + L +
Sbjct: 70 REIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYF 129
Query: 290 ALDIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIA----CEEVYCDALSDDPG 345
I RG++YIHS V+HRDLKP N+L++ LKI DFG+A + + L++
Sbjct: 130 LYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVA 189
Query: 346 TYRWMAPE-MIKHKSYGRKVDVYSFGLILWEMVAG 379
T + APE M+ K Y + +D++S G IL EM++
Sbjct: 190 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN 224
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/155 (32%), Positives = 83/155 (53%), Gaps = 6/155 (3%)
Query: 231 REVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKL-EHKTLPLPKLIAI 289
RE+ +L R + N+I + P + + Y+ + + L+KL + + L +
Sbjct: 70 REIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYF 129
Query: 290 ALDIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIA----CEEVYCDALSDDPG 345
I RG++YIHS V+HRDLKP N+L++ LKI DFG+A + + L++
Sbjct: 130 LYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKIXDFGLARVADPDHDHTGFLTEYVA 189
Query: 346 TYRWMAPE-MIKHKSYGRKVDVYSFGLILWEMVAG 379
T + APE M+ K Y + +D++S G IL EM++
Sbjct: 190 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN 224
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 107/217 (49%), Gaps = 16/217 (7%)
Query: 225 LEKQFNREVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLP 284
+ Q RE+ +L ++P ++ F A + E++ GSL L K +P
Sbjct: 50 IRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKK--AGRIPEQ 107
Query: 285 KLIAIALDIARGMEYIHSQ-GVIHRDLKPENVLIDQEFHLKIADFGIACEEVYCDALSDD 343
L +++ + +G+ Y+ + ++HRD+KP N+L++ +K+ DFG++ + + D ++++
Sbjct: 108 ILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLI--DEMANE 165
Query: 344 -PGTYRWMAPEMIKHKSYGRKVDVYSFGLILWEMVAGTIPYEEMNPIQAAFAVVNKNLRP 402
GT +M+PE ++ Y + D++S GL L EM G P M + +VN+
Sbjct: 166 FVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPRPPMAIFELLDYIVNEP--- 222
Query: 403 AIPGDCPPAMAAL-----IEQCWSLQPDKRPEFWHIV 434
P P A+ +L + +C P +R + ++
Sbjct: 223 --PPKLPSAVFSLEFQDFVNKCLIKNPAERADLKQLM 257
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/155 (32%), Positives = 83/155 (53%), Gaps = 6/155 (3%)
Query: 231 REVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKL-EHKTLPLPKLIAI 289
RE+ +L R + N+I + P + + Y+ + + L+KL + + L +
Sbjct: 75 REIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYF 134
Query: 290 ALDIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIA----CEEVYCDALSDDPG 345
I RG++YIHS V+HRDLKP N+L++ LKI DFG+A + + L++
Sbjct: 135 LYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA 194
Query: 346 TYRWMAPE-MIKHKSYGRKVDVYSFGLILWEMVAG 379
T + APE M+ K Y + +D++S G IL EM++
Sbjct: 195 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN 229
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/155 (32%), Positives = 83/155 (53%), Gaps = 6/155 (3%)
Query: 231 REVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKL-EHKTLPLPKLIAI 289
RE+ +L R + N+I + P + + Y+ + + L+KL + + L +
Sbjct: 76 REIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYF 135
Query: 290 ALDIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIA----CEEVYCDALSDDPG 345
I RG++YIHS V+HRDLKP N+L++ LKI DFG+A + + L++
Sbjct: 136 LYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA 195
Query: 346 TYRWMAPE-MIKHKSYGRKVDVYSFGLILWEMVAG 379
T + APE M+ K Y + +D++S G IL EM++
Sbjct: 196 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN 230
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/155 (32%), Positives = 83/155 (53%), Gaps = 6/155 (3%)
Query: 231 REVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKL-EHKTLPLPKLIAI 289
RE+ +L R + N+I + P + + Y+ + + L+KL + + L +
Sbjct: 67 REIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYF 126
Query: 290 ALDIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIA----CEEVYCDALSDDPG 345
I RG++YIHS V+HRDLKP N+L++ LKI DFG+A + + L++
Sbjct: 127 LYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA 186
Query: 346 TYRWMAPE-MIKHKSYGRKVDVYSFGLILWEMVAG 379
T + APE M+ K Y + +D++S G IL EM++
Sbjct: 187 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN 221
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/155 (32%), Positives = 83/155 (53%), Gaps = 6/155 (3%)
Query: 231 REVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKL-EHKTLPLPKLIAI 289
RE+ +L R + N+I + P + + Y+ + + L+KL + + L +
Sbjct: 74 REIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYF 133
Query: 290 ALDIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIA----CEEVYCDALSDDPG 345
I RG++YIHS V+HRDLKP N+L++ LKI DFG+A + + L++
Sbjct: 134 LYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA 193
Query: 346 TYRWMAPE-MIKHKSYGRKVDVYSFGLILWEMVAG 379
T + APE M+ K Y + +D++S G IL EM++
Sbjct: 194 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN 228
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/155 (32%), Positives = 83/155 (53%), Gaps = 6/155 (3%)
Query: 231 REVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKL-EHKTLPLPKLIAI 289
RE+ +L R + N+I + P + + Y+ + + L+KL + + L +
Sbjct: 74 REIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYF 133
Query: 290 ALDIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIA----CEEVYCDALSDDPG 345
I RG++YIHS V+HRDLKP N+L++ LKI DFG+A + + L++
Sbjct: 134 LYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA 193
Query: 346 TYRWMAPE-MIKHKSYGRKVDVYSFGLILWEMVAG 379
T + APE M+ K Y + +D++S G IL EM++
Sbjct: 194 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN 228
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/155 (32%), Positives = 83/155 (53%), Gaps = 6/155 (3%)
Query: 231 REVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKL-EHKTLPLPKLIAI 289
RE+ +L R + N+I + P + + Y+ + + L+KL + + L +
Sbjct: 68 REIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYF 127
Query: 290 ALDIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIA----CEEVYCDALSDDPG 345
I RG++YIHS V+HRDLKP N+L++ LKI DFG+A + + L++
Sbjct: 128 LYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA 187
Query: 346 TYRWMAPE-MIKHKSYGRKVDVYSFGLILWEMVAG 379
T + APE M+ K Y + +D++S G IL EM++
Sbjct: 188 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN 222
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/155 (32%), Positives = 83/155 (53%), Gaps = 6/155 (3%)
Query: 231 REVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKL-EHKTLPLPKLIAI 289
RE+ +L R + N+I + P + + Y+ + + L+KL + + L +
Sbjct: 78 REIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYF 137
Query: 290 ALDIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIA----CEEVYCDALSDDPG 345
I RG++YIHS V+HRDLKP N+L++ LKI DFG+A + + L++
Sbjct: 138 LYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA 197
Query: 346 TYRWMAPE-MIKHKSYGRKVDVYSFGLILWEMVAG 379
T + APE M+ K Y + +D++S G IL EM++
Sbjct: 198 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN 232
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/155 (32%), Positives = 83/155 (53%), Gaps = 6/155 (3%)
Query: 231 REVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKL-EHKTLPLPKLIAI 289
RE+ +L R + N+I + P + + Y+ + + L+KL + + L +
Sbjct: 70 REIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYF 129
Query: 290 ALDIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIA----CEEVYCDALSDDPG 345
I RG++YIHS V+HRDLKP N+L++ LKI DFG+A + + L++
Sbjct: 130 LYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA 189
Query: 346 TYRWMAPE-MIKHKSYGRKVDVYSFGLILWEMVAG 379
T + APE M+ K Y + +D++S G IL EM++
Sbjct: 190 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN 224
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/155 (32%), Positives = 82/155 (52%), Gaps = 6/155 (3%)
Query: 231 REVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKL-EHKTLPLPKLIAI 289
RE+ +L R + N+I + P + + Y+ + + L+KL + + L +
Sbjct: 74 REIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYF 133
Query: 290 ALDIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIA----CEEVYCDALSDDPG 345
I RG++YIHS V+HRDLKP N+L++ LKI DFG+A + + L +
Sbjct: 134 LYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVA 193
Query: 346 TYRWMAPE-MIKHKSYGRKVDVYSFGLILWEMVAG 379
T + APE M+ K Y + +D++S G IL EM++
Sbjct: 194 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN 228
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 76/266 (28%), Positives = 118/266 (44%), Gaps = 28/266 (10%)
Query: 174 HTVDLSQLFLGLRFAHGAHSRLYHGIYKDEPVAVKIIRIPDDDENETLAARLEKQFNREV 233
H D +L + + +RL +E VAVK I + E +AA ++ RE+
Sbjct: 16 HDSDRYELVKDIGSGNFGVARLMRDKQSNELVAVKYI-----ERGEKIAANVK----REI 66
Query: 234 ALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSL-----RAYLHKLEHKTLPLPKLIA 288
L +PN+++F P ++ EY S G L A + +LI+
Sbjct: 67 INHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLIS 126
Query: 289 IALDIARGMEYIHSQGVIHRDLKPENVLIDQE--FHLKIADFGIACEEVYCDALSDDPGT 346
G+ Y H+ V HRDLK EN L+D LKI DFG + V GT
Sbjct: 127 -------GVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGT 179
Query: 347 YRWMAPEMIKHKSY-GRKVDVYSFGLILWEMVAGTIPYEEMNPIQAAFAVVNK--NLRPA 403
++APE++ K Y G+ DV+S G+ L+ M+ G P+E+ + +++ N++ A
Sbjct: 180 PAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYA 239
Query: 404 IPG--DCPPAMAALIEQCWSLQPDKR 427
IP P LI + + P KR
Sbjct: 240 IPDYVHISPECRHLISRIFVADPAKR 265
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/155 (32%), Positives = 82/155 (52%), Gaps = 6/155 (3%)
Query: 231 REVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKL-EHKTLPLPKLIAI 289
RE+ +L R + N+I + P + + Y+ + + L+KL + + L +
Sbjct: 75 REIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYF 134
Query: 290 ALDIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIA----CEEVYCDALSDDPG 345
I RG++YIHS V+HRDLKP N+L++ LKI DFG+A + + L +
Sbjct: 135 LYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVA 194
Query: 346 TYRWMAPE-MIKHKSYGRKVDVYSFGLILWEMVAG 379
T + APE M+ K Y + +D++S G IL EM++
Sbjct: 195 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN 229
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/155 (32%), Positives = 83/155 (53%), Gaps = 6/155 (3%)
Query: 231 REVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKL-EHKTLPLPKLIAI 289
RE+ +L R + N+I + P + + Y+ + + L+KL + + L +
Sbjct: 70 REIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYF 129
Query: 290 ALDIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIA----CEEVYCDALSDDPG 345
I RG++YIHS V+HRDLKP N+L++ LKI DFG+A + + L++
Sbjct: 130 LYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA 189
Query: 346 TYRWMAPE-MIKHKSYGRKVDVYSFGLILWEMVAG 379
T + APE M+ K Y + +D++S G IL EM++
Sbjct: 190 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN 224
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/155 (32%), Positives = 83/155 (53%), Gaps = 6/155 (3%)
Query: 231 REVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKL-EHKTLPLPKLIAI 289
RE+ +L R + N+I + P + + Y+ + + L+KL + + L +
Sbjct: 68 REIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYF 127
Query: 290 ALDIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIA----CEEVYCDALSDDPG 345
I RG++YIHS V+HRDLKP N+L++ LKI DFG+A + + L++
Sbjct: 128 LYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA 187
Query: 346 TYRWMAPE-MIKHKSYGRKVDVYSFGLILWEMVAG 379
T + APE M+ K Y + +D++S G IL EM++
Sbjct: 188 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN 222
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/155 (32%), Positives = 83/155 (53%), Gaps = 6/155 (3%)
Query: 231 REVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKL-EHKTLPLPKLIAI 289
RE+ +L R + N+I + P + + Y+ + + L+KL + + L +
Sbjct: 72 REIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYF 131
Query: 290 ALDIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIA----CEEVYCDALSDDPG 345
I RG++YIHS V+HRDLKP N+L++ LKI DFG+A + + L++
Sbjct: 132 LYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA 191
Query: 346 TYRWMAPE-MIKHKSYGRKVDVYSFGLILWEMVAG 379
T + APE M+ K Y + +D++S G IL EM++
Sbjct: 192 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN 226
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 50/155 (32%), Positives = 83/155 (53%), Gaps = 6/155 (3%)
Query: 231 REVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKL-EHKTLPLPKLIAI 289
RE+ +L R + N+I + P + + Y+ + + L+KL + + L +
Sbjct: 90 REIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYF 149
Query: 290 ALDIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIA----CEEVYCDALSDDPG 345
I RG++YIHS V+HRDLKP N+L++ LKI DFG+A + + L++
Sbjct: 150 LYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA 209
Query: 346 TYRWMAPE-MIKHKSYGRKVDVYSFGLILWEMVAG 379
T + APE M+ K Y + +D++S G IL EM++
Sbjct: 210 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN 244
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 74/266 (27%), Positives = 116/266 (43%), Gaps = 28/266 (10%)
Query: 174 HTVDLSQLFLGLRFAHGAHSRLYHGIYKDEPVAVKIIRIPDDDENETLAARLEKQFNREV 233
H D +L + + +RL +E VAVK I ++++ RE+
Sbjct: 16 HDSDRYELVKDIGAGNFGVARLMRDKQANELVAVKYIE---------RGEKIDENVKREI 66
Query: 234 ALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSL-----RAYLHKLEHKTLPLPKLIA 288
L +PN+++F P ++ EY S G L A + +LI+
Sbjct: 67 INHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLIS 126
Query: 289 IALDIARGMEYIHSQGVIHRDLKPENVLIDQE--FHLKIADFGIACEEVYCDALSDDPGT 346
G+ Y H+ V HRDLK EN L+D LKIADFG + V GT
Sbjct: 127 -------GVSYAHAMQVAHRDLKLENTLLDGSPAPRLKIADFGYSKASVLHSQPKSAVGT 179
Query: 347 YRWMAPEMIKHKSY-GRKVDVYSFGLILWEMVAGTIPYEEMNPIQAAFAVVNK--NLRPA 403
++APE++ K Y G+ DV+S G+ L+ M+ G P+E+ + +++ N++ A
Sbjct: 180 PAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYA 239
Query: 404 IPG--DCPPAMAALIEQCWSLQPDKR 427
IP P LI + + P KR
Sbjct: 240 IPDYVHISPECRHLISRIFVADPAKR 265
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 50/155 (32%), Positives = 83/155 (53%), Gaps = 6/155 (3%)
Query: 231 REVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKL-EHKTLPLPKLIAI 289
RE+ +L R + N+I + P + + Y+ + + L+KL + + L +
Sbjct: 74 REIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKCQHLSNDHICYF 133
Query: 290 ALDIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIA----CEEVYCDALSDDPG 345
I RG++YIHS V+HRDLKP N+L++ LKI DFG+A + + L++
Sbjct: 134 LYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA 193
Query: 346 TYRWMAPE-MIKHKSYGRKVDVYSFGLILWEMVAG 379
T + APE M+ K Y + +D++S G IL EM++
Sbjct: 194 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN 228
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 72/254 (28%), Positives = 118/254 (46%), Gaps = 18/254 (7%)
Query: 186 RFAHGAHSRLYHGIYKDEPVAVKIIRIPDDDENETLAARLEKQFNREVALLSR-LHNPNV 244
R A+G ++ H + + +AVK IR T+ ++ +K+ ++ + R + P
Sbjct: 17 RGAYGVVEKMRH-VPSGQIMAVKRIR-------ATVNSQEQKRLLMDLDISMRTVDCPFT 68
Query: 245 IKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEH-KTLPLPKLIAIALDIARGMEYIHSQ 303
+ F A + + E + + Y ++ +T+P L IA+ I + +E++HS+
Sbjct: 69 VTFYGALFREGDVWICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSK 128
Query: 304 -GVIHRDLKPENVLIDQEFHLKIADFGIACEEVYCDALSDDPGTYRWMAPEMI----KHK 358
VIHRD+KP NVLI+ +K+ DFGI+ V A D G +MAPE I K
Sbjct: 129 LSVIHRDVKPSNVLINALGQVKMCDFGISGYLVDDVAKDIDAGCKPYMAPERINPELNQK 188
Query: 359 SYGRKVDVYSFGLILWEMVAGTIPYEEM-NPIQAAFAVVNKNLRPAIPGDCPPA-MAALI 416
Y K D++S G+ + E+ PY+ P Q VV + P +P D A
Sbjct: 189 GYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVEEP-SPQLPADKFSAEFVDFT 247
Query: 417 EQCWSLQPDKRPEF 430
QC +RP +
Sbjct: 248 SQCLKKNSKERPTY 261
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 60/248 (24%), Positives = 119/248 (47%), Gaps = 15/248 (6%)
Query: 187 FAHGAHSRLYHGIYKDEPV--AVKIIRIPDDDENETLAARLEKQFNREVALLSRLHNPNV 244
GA S + ++K + A KII + L+AR ++ RE + +L +PN+
Sbjct: 37 LGKGAFSVVRRCVHKTTGLEFAAKIIN------TKKLSARDFQKLEREARICRKLQHPNI 90
Query: 245 IKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIALDIARGMEYIHSQG 304
++ + ++ + ++ + ++ G L + + + I + Y HS G
Sbjct: 91 VRLHDSIQEESFHYLVFDLVTGGEL--FEDIVAREFYSEADASHCIQQILESIAYCHSNG 148
Query: 305 VIHRDLKPENVLIDQEFH---LKIADFGIACEEVYCDALSDDPGTYRWMAPEMIKHKSYG 361
++HR+LKPEN+L+ + +K+ADFG+A E +A GT +++PE++K Y
Sbjct: 149 IVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDPYS 208
Query: 362 RKVDVYSFGLILWEMVAGTIPY--EEMNPIQAAFAVVNKNLRPAIPGDCPPAMAALIEQC 419
+ VD+++ G+IL+ ++ G P+ E+ + + A + P +LI+
Sbjct: 209 KPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKSLIDSM 268
Query: 420 WSLQPDKR 427
++ P KR
Sbjct: 269 LTVNPKKR 276
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 89/166 (53%), Gaps = 7/166 (4%)
Query: 226 EKQFNREVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSL-RAYLHKLEHKTLPLP 284
E E+A+L ++ +PN++ + +I + +S G L + K +
Sbjct: 60 EGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDAS 119
Query: 285 KLIAIALDIARGMEYIHSQGVIHRDLKPENVL---IDQEFHLKIADFGIACEEVYCDALS 341
+LI LD ++Y+H G++HRDLKPEN+L +D++ + I+DFG++ E LS
Sbjct: 120 RLIFQVLD---AVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLS 176
Query: 342 DDPGTYRWMAPEMIKHKSYGRKVDVYSFGLILWEMVAGTIPYEEMN 387
GT ++APE++ K Y + VD +S G+I + ++ G P+ + N
Sbjct: 177 TACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDEN 222
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 86/157 (54%), Gaps = 6/157 (3%)
Query: 231 REVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIA 290
REV++L + +PNVI + +I E ++ G L +L E ++L +
Sbjct: 63 REVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLA--EKESLTEEEATEFL 120
Query: 291 LDIARGMEYIHSQGVIHRDLKPENV-LIDQEF---HLKIADFGIACEEVYCDALSDDPGT 346
I G+ Y+HS + H DLKPEN+ L+D+ +KI DFG+A + + + + GT
Sbjct: 121 KQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGT 180
Query: 347 YRWMAPEMIKHKSYGRKVDVYSFGLILWEMVAGTIPY 383
++APE++ ++ G + D++S G+I + +++G P+
Sbjct: 181 PEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 86/157 (54%), Gaps = 6/157 (3%)
Query: 231 REVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIA 290
REV++L + +PNVI + +I E ++ G L +L E ++L +
Sbjct: 63 REVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLA--EKESLTEEEATEFL 120
Query: 291 LDIARGMEYIHSQGVIHRDLKPENV-LIDQEF---HLKIADFGIACEEVYCDALSDDPGT 346
I G+ Y+HS + H DLKPEN+ L+D+ +KI DFG+A + + + + GT
Sbjct: 121 KQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGT 180
Query: 347 YRWMAPEMIKHKSYGRKVDVYSFGLILWEMVAGTIPY 383
++APE++ ++ G + D++S G+I + +++G P+
Sbjct: 181 PEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 105/216 (48%), Gaps = 25/216 (11%)
Query: 187 FAHGAHSRLYHGIYK--DEPVAVKIIRIPDDDENETLAARLEKQFNREVALLSRLHNPNV 244
GA S +Y K +P A+K+++ D +K E+ +L RL +PN+
Sbjct: 61 LGRGATSIVYRCKQKGTQKPYALKVLKKTVD----------KKIVRTEIGVLLRLSHPNI 110
Query: 245 IKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIAL-DIARGMEYIHSQ 303
IK + P ++ E ++ G L ++ K + A A+ I + Y+H
Sbjct: 111 IKLKEIFETPTEISLVLELVTGGEL---FDRIVEKGYYSERDAADAVKQILEAVAYLHEN 167
Query: 304 GVIHRDLKPENVLIDQ---EFHLKIADFG---IACEEVYCDALSDDPGTYRWMAPEMIKH 357
G++HRDLKPEN+L + LKIADFG I +V + PG + APE+++
Sbjct: 168 GIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQVLMKTVCGTPG---YCAPEILRG 224
Query: 358 KSYGRKVDVYSFGLILWEMVAGTIPYEEMNPIQAAF 393
+YG +VD++S G+I + ++ G P+ + Q F
Sbjct: 225 CAYGPEVDMWSVGIITYILLCGFEPFYDERGDQFMF 260
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 86/157 (54%), Gaps = 6/157 (3%)
Query: 231 REVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIA 290
REV++L + +PNVI + +I E ++ G L +L E ++L +
Sbjct: 62 REVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLA--EKESLTEEEATEFL 119
Query: 291 LDIARGMEYIHSQGVIHRDLKPENV-LIDQEF---HLKIADFGIACEEVYCDALSDDPGT 346
I G+ Y+HS + H DLKPEN+ L+D+ +KI DFG+A + + + + GT
Sbjct: 120 KQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGT 179
Query: 347 YRWMAPEMIKHKSYGRKVDVYSFGLILWEMVAGTIPY 383
++APE++ ++ G + D++S G+I + +++G P+
Sbjct: 180 PEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 216
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 86/157 (54%), Gaps = 6/157 (3%)
Query: 231 REVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIA 290
REV++L + +PNVI + +I E ++ G L +L E ++L +
Sbjct: 63 REVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLA--EKESLTEEEATEFL 120
Query: 291 LDIARGMEYIHSQGVIHRDLKPENV-LIDQEF---HLKIADFGIACEEVYCDALSDDPGT 346
I G+ Y+HS + H DLKPEN+ L+D+ +KI DFG+A + + + + GT
Sbjct: 121 KQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGT 180
Query: 347 YRWMAPEMIKHKSYGRKVDVYSFGLILWEMVAGTIPY 383
++APE++ ++ G + D++S G+I + +++G P+
Sbjct: 181 PEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 86/157 (54%), Gaps = 6/157 (3%)
Query: 231 REVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIA 290
REV++L + +PNVI + +I E ++ G L +L E ++L +
Sbjct: 62 REVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLA--EKESLTEEEATEFL 119
Query: 291 LDIARGMEYIHSQGVIHRDLKPENV-LIDQEF---HLKIADFGIACEEVYCDALSDDPGT 346
I G+ Y+HS + H DLKPEN+ L+D+ +KI DFG+A + + + + GT
Sbjct: 120 KQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGT 179
Query: 347 YRWMAPEMIKHKSYGRKVDVYSFGLILWEMVAGTIPY 383
++APE++ ++ G + D++S G+I + +++G P+
Sbjct: 180 PEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 216
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 73/266 (27%), Positives = 115/266 (43%), Gaps = 28/266 (10%)
Query: 174 HTVDLSQLFLGLRFAHGAHSRLYHGIYKDEPVAVKIIRIPDDDENETLAARLEKQFNREV 233
H D +L + + +RL +E VAVK I ++++ RE+
Sbjct: 15 HDSDRYELVKDIGSGNFGVARLMRDKQSNELVAVKYIE---------RGEKIDENVKREI 65
Query: 234 ALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSL-----RAYLHKLEHKTLPLPKLIA 288
L +PN+++F P ++ EY S G L A + +LI+
Sbjct: 66 INHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLIS 125
Query: 289 IALDIARGMEYIHSQGVIHRDLKPENVLIDQE--FHLKIADFGIACEEVYCDALSDDPGT 346
G+ Y H+ V HRDLK EN L+D LKI DFG + V GT
Sbjct: 126 -------GVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGT 178
Query: 347 YRWMAPEMIKHKSY-GRKVDVYSFGLILWEMVAGTIPYEEMNPIQAAFAVVNK--NLRPA 403
++APE++ K Y G+ DV+S G+ L+ M+ G P+E+ + +++ N++ A
Sbjct: 179 PAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYA 238
Query: 404 IPG--DCPPAMAALIEQCWSLQPDKR 427
IP P LI + + P KR
Sbjct: 239 IPDYVHISPECRHLISRIFVADPAKR 264
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 60/197 (30%), Positives = 97/197 (49%), Gaps = 14/197 (7%)
Query: 196 YHGIYKDEPVAVKIIRIPDDDENETLA---ARLEKQFN-------REVALLSRLHNPNVI 245
YHG+ K ++ ++ ET A RLEK+ RE+++L L + N++
Sbjct: 4 YHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIV 63
Query: 246 KFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIALDIARGMEYIHSQGV 305
K ++ E+L + L+ L E L + L + G+ Y H + V
Sbjct: 64 KLYDVIHTKKRLVLVFEHLDQ-DLKKLLDVCE-GGLESVTAKSFLLQLLNGIAYCHDRRV 121
Query: 306 IHRDLKPENVLIDQEFHLKIADFGIA-CEEVYCDALSDDPGTYRWMAPE-MIKHKSYGRK 363
+HRDLKP+N+LI++E LKIADFG+A + + + T + AP+ ++ K Y
Sbjct: 122 LHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVVTLWYRAPDVLMGSKKYSTT 181
Query: 364 VDVYSFGLILWEMVAGT 380
+D++S G I EMV GT
Sbjct: 182 IDIWSVGCIFAEMVNGT 198
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 86/157 (54%), Gaps = 6/157 (3%)
Query: 231 REVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIA 290
REV++L + +PNVI + +I E ++ G L +L E ++L +
Sbjct: 63 REVSILKEIQHPNVITLHEVYENKTDVILIGELVAGGELFDFL--AEKESLTEEEATEFL 120
Query: 291 LDIARGMEYIHSQGVIHRDLKPENV-LIDQEF---HLKIADFGIACEEVYCDALSDDPGT 346
I G+ Y+HS + H DLKPEN+ L+D+ +KI DFG+A + + + + GT
Sbjct: 121 KQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGT 180
Query: 347 YRWMAPEMIKHKSYGRKVDVYSFGLILWEMVAGTIPY 383
++APE++ ++ G + D++S G+I + +++G P+
Sbjct: 181 PEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 86/157 (54%), Gaps = 6/157 (3%)
Query: 231 REVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIA 290
REV++L + +PNVI + +I E ++ G L +L E ++L +
Sbjct: 63 REVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLA--EKESLTEEEATEFL 120
Query: 291 LDIARGMEYIHSQGVIHRDLKPENV-LIDQEF---HLKIADFGIACEEVYCDALSDDPGT 346
I G+ Y+HS + H DLKPEN+ L+D+ +KI DFG+A + + + + GT
Sbjct: 121 KQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGT 180
Query: 347 YRWMAPEMIKHKSYGRKVDVYSFGLILWEMVAGTIPY 383
++APE++ ++ G + D++S G+I + +++G P+
Sbjct: 181 PEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 60/197 (30%), Positives = 97/197 (49%), Gaps = 14/197 (7%)
Query: 196 YHGIYKDEPVAVKIIRIPDDDENETLA---ARLEKQFN-------REVALLSRLHNPNVI 245
YHG+ K ++ ++ ET A RLEK+ RE+++L L + N++
Sbjct: 4 YHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIV 63
Query: 246 KFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIALDIARGMEYIHSQGV 305
K ++ E+L + L+ L E L + L + G+ Y H + V
Sbjct: 64 KLYDVIHTKKRLVLVFEHLDQ-DLKKLLDVCE-GGLESVTAKSFLLQLLNGIAYCHDRRV 121
Query: 306 IHRDLKPENVLIDQEFHLKIADFGIA-CEEVYCDALSDDPGTYRWMAPE-MIKHKSYGRK 363
+HRDLKP+N+LI++E LKIADFG+A + + + T + AP+ ++ K Y
Sbjct: 122 LHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEIVTLWYRAPDVLMGSKKYSTT 181
Query: 364 VDVYSFGLILWEMVAGT 380
+D++S G I EMV GT
Sbjct: 182 IDIWSVGCIFAEMVNGT 198
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 90/161 (55%), Gaps = 6/161 (3%)
Query: 227 KQFNREVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKL 286
++ REV++L ++ +PN+I + +I E +S G L +L + E +L +
Sbjct: 60 EEIEREVSILRQVLHPNIITLHDVYENRTDVVLILELVSGGELFDFLAQKE--SLSEEEA 117
Query: 287 IAIALDIARGMEYIHSQGVIHRDLKPENV-LIDQEF---HLKIADFGIACEEVYCDALSD 342
+ I G+ Y+H++ + H DLKPEN+ L+D+ H+K+ DFG+A E +
Sbjct: 118 TSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKN 177
Query: 343 DPGTYRWMAPEMIKHKSYGRKVDVYSFGLILWEMVAGTIPY 383
GT ++APE++ ++ G + D++S G+I + +++G P+
Sbjct: 178 IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 218
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 86/157 (54%), Gaps = 6/157 (3%)
Query: 231 REVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIA 290
REV++L + +PNVI + +I E ++ G L +L E ++L +
Sbjct: 63 REVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLA--EKESLTEEEATEFL 120
Query: 291 LDIARGMEYIHSQGVIHRDLKPENV-LIDQEF---HLKIADFGIACEEVYCDALSDDPGT 346
I G+ Y+HS + H DLKPEN+ L+D+ +KI DFG+A + + + + GT
Sbjct: 121 KQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGT 180
Query: 347 YRWMAPEMIKHKSYGRKVDVYSFGLILWEMVAGTIPY 383
++APE++ ++ G + D++S G+I + +++G P+
Sbjct: 181 PEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 86/160 (53%), Gaps = 6/160 (3%)
Query: 225 LEKQFNREVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLP 284
+ Q RE+ +L ++P ++ F A + E++ GSL L K +P
Sbjct: 109 IRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR--IPEQ 166
Query: 285 KLIAIALDIARGMEYIHSQ-GVIHRDLKPENVLIDQEFHLKIADFGIACEEVYCDALSDD 343
L +++ + +G+ Y+ + ++HRD+KP N+L++ +K+ DFG++ + + D++++
Sbjct: 167 ILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLI--DSMANS 224
Query: 344 -PGTYRWMAPEMIKHKSYGRKVDVYSFGLILWEMVAGTIP 382
GT +M+PE ++ Y + D++S GL L EM G P
Sbjct: 225 FVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYP 264
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 86/157 (54%), Gaps = 6/157 (3%)
Query: 231 REVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIA 290
REV++L + +PNVI + +I E ++ G L +L E ++L +
Sbjct: 63 REVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLA--EKESLTEEEATEFL 120
Query: 291 LDIARGMEYIHSQGVIHRDLKPENV-LIDQEF---HLKIADFGIACEEVYCDALSDDPGT 346
I G+ Y+HS + H DLKPEN+ L+D+ +KI DFG+A + + + + GT
Sbjct: 121 KQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGT 180
Query: 347 YRWMAPEMIKHKSYGRKVDVYSFGLILWEMVAGTIPY 383
++APE++ ++ G + D++S G+I + +++G P+
Sbjct: 181 PEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 90/207 (43%), Gaps = 19/207 (9%)
Query: 239 LHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIALDIARGME 298
L N +K + A KK + EY +L +H E+ + + I +
Sbjct: 72 LERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHS-ENLNQQRDEYWRLFRQILEALS 130
Query: 299 YIHSQGVIHRDLKPENVLIDQEFHLKIADFGIACEEVY----------------CDALSD 342
YIHSQG+IHRDLKP N+ ID+ ++KI DFG+A + V+ D L+
Sbjct: 131 YIHSQGIIHRDLKPMNIFIDESRNVKIGDFGLA-KNVHRSLDILKLDSQNLPGSSDNLTS 189
Query: 343 DPGTYRWMAPEMIKHKS-YGRKVDVYSFGLILWEMVAGTIPYEEMNPIQAAFAVVNKNLR 401
GT ++A E++ Y K+D+YS G+I +EM+ E I V+
Sbjct: 190 AIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIYPFSTGMERVNILKKLRSVSIEFP 249
Query: 402 PAIPGDCPPAMAALIEQCWSLQPDKRP 428
P + +I P+KRP
Sbjct: 250 PDFDDNKMKVEKKIIRLLIDHDPNKRP 276
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 76/286 (26%), Positives = 127/286 (44%), Gaps = 60/286 (20%)
Query: 188 AHGAHSRLYHGIYKDEPVAVKIIRIPDDDENETLAARLEKQFNREVALLSRLHNPNVIKF 247
A G ++ ++ VAVKI + D + Q RE+ + + N+++F
Sbjct: 24 ARGRFGCVWKAQLMNDFVAVKIFPLQD---------KQSWQSEREIFSTPGMKHENLLQF 74
Query: 248 VAACKKPPVYCV----ITEYLSEGSLRAYLHKLEHKTLPLPKLIAIALDIARGMEYIHSQ 303
+AA K+ V IT + +GSL YL + + +L +A ++RG+ Y+H
Sbjct: 75 IAAEKRGSNLEVELWLITAFHDKGSLTDYL---KGNIITWNELCHVAETMSRGLSYLHED 131
Query: 304 -----------GVIHRDLKPENVLIDQEFHLKIADFGIACEEVYCDALSD---DPGTYRW 349
+ HRD K +NVL+ + +ADFG+A D GT R+
Sbjct: 132 VPWCRGEGHKPSIAHRDFKSKNVLLKSDLTAVLADFGLAVRFEPGKPPGDTHGQVGTRRY 191
Query: 350 MAPEMIK-----HKSYGRKVDVYSFGLILWEMVAG-----------TIPYEE-------M 386
MAPE+++ + ++D+Y+ GL+LWE+V+ +P+EE +
Sbjct: 192 MAPEVLEGAINFQRDAFLRIDMYAMGLVLWELVSRCKAADGPVDEYMLPFEEEIGQHPSL 251
Query: 387 NPIQAAFAVVNKNLRPAIPGDC--PPAMAAL---IEQCWSLQPDKR 427
+Q VV+K +RP I P +A L IE+CW + R
Sbjct: 252 EELQE--VVVHKKMRPTIKDHWLKHPGLAQLCVTIEECWDHDAEAR 295
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 89/166 (53%), Gaps = 7/166 (4%)
Query: 226 EKQFNREVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSL-RAYLHKLEHKTLPLP 284
E E+A+L ++ +PN++ + +I + +S G L + K +
Sbjct: 60 EGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDAS 119
Query: 285 KLIAIALDIARGMEYIHSQGVIHRDLKPENVL---IDQEFHLKIADFGIACEEVYCDALS 341
+LI LD ++Y+H G++HRDLKPEN+L +D++ + I+DFG++ E LS
Sbjct: 120 RLIFQVLD---AVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLS 176
Query: 342 DDPGTYRWMAPEMIKHKSYGRKVDVYSFGLILWEMVAGTIPYEEMN 387
GT ++APE++ K Y + VD +S G+I + ++ G P+ + N
Sbjct: 177 TACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDEN 222
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 97/187 (51%), Gaps = 14/187 (7%)
Query: 205 VAVKIIRIPDDDENETLAARLEKQFNREVALLSRLHNPNVIKFVAACKKPPVYCVITEYL 264
VA+K I E L + E E+A+L ++ +PN++ + +I + +
Sbjct: 46 VAIKCIA------KEALEGK-EGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLV 98
Query: 265 SEGSL-RAYLHKLEHKTLPLPKLIAIALDIARGMEYIHSQGVIHRDLKPENVL---IDQE 320
S G L + K + +LI LD ++Y+H G++HRDLKPEN+L +D++
Sbjct: 99 SGGELFDRIVEKGFYTERDASRLIFQVLD---AVKYLHDLGIVHRDLKPENLLYYSLDED 155
Query: 321 FHLKIADFGIACEEVYCDALSDDPGTYRWMAPEMIKHKSYGRKVDVYSFGLILWEMVAGT 380
+ I+DFG++ E LS GT ++APE++ K Y + VD +S G+I + ++ G
Sbjct: 156 SKIMISDFGLSKMEDPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGY 215
Query: 381 IPYEEMN 387
P+ + N
Sbjct: 216 PPFYDEN 222
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 86/157 (54%), Gaps = 6/157 (3%)
Query: 231 REVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIA 290
REV++L + +PNVI + +I E ++ G L +L E ++L +
Sbjct: 63 REVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLA--EKESLTEEEATEFL 120
Query: 291 LDIARGMEYIHSQGVIHRDLKPENV-LIDQEF---HLKIADFGIACEEVYCDALSDDPGT 346
I G+ Y+HS + H DLKPEN+ L+D+ +KI DFG+A + + + + GT
Sbjct: 121 KQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGT 180
Query: 347 YRWMAPEMIKHKSYGRKVDVYSFGLILWEMVAGTIPY 383
++APE++ ++ G + D++S G+I + +++G P+
Sbjct: 181 PEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 86/157 (54%), Gaps = 6/157 (3%)
Query: 231 REVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIA 290
REV++L + +PNVI + +I E ++ G L +L E ++L +
Sbjct: 63 REVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLA--EKESLTEEEATEFL 120
Query: 291 LDIARGMEYIHSQGVIHRDLKPENV-LIDQEF---HLKIADFGIACEEVYCDALSDDPGT 346
I G+ Y+HS + H DLKPEN+ L+D+ +KI DFG+A + + + + GT
Sbjct: 121 KQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGT 180
Query: 347 YRWMAPEMIKHKSYGRKVDVYSFGLILWEMVAGTIPY 383
++APE++ ++ G + D++S G+I + +++G P+
Sbjct: 181 PEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 89/166 (53%), Gaps = 7/166 (4%)
Query: 226 EKQFNREVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSL-RAYLHKLEHKTLPLP 284
E E+A+L ++ +PN++ + +I + +S G L + K +
Sbjct: 60 EGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDAS 119
Query: 285 KLIAIALDIARGMEYIHSQGVIHRDLKPENVL---IDQEFHLKIADFGIACEEVYCDALS 341
+LI LD ++Y+H G++HRDLKPEN+L +D++ + I+DFG++ E LS
Sbjct: 120 RLIFQVLD---AVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLS 176
Query: 342 DDPGTYRWMAPEMIKHKSYGRKVDVYSFGLILWEMVAGTIPYEEMN 387
GT ++APE++ K Y + VD +S G+I + ++ G P+ + N
Sbjct: 177 TACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDEN 222
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 94/181 (51%), Gaps = 12/181 (6%)
Query: 225 LEKQFNREVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLP 284
+ Q RE+ +L ++P ++ F A + E++ GSL L K +P
Sbjct: 47 IRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR--IPEQ 104
Query: 285 KLIAIALDIARGMEYIHSQ-GVIHRDLKPENVLIDQEFHLKIADFGIACEEVYCDALSDD 343
L +++ + +G+ Y+ + ++HRD+KP N+L++ +K+ DFG++ + + D++++
Sbjct: 105 ILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLI--DSMANS 162
Query: 344 -PGTYRWMAPEMIKHKSYGRKVDVYSFGLILWEMVAGTIPY------EEMNPIQAAFAVV 396
GT +M+PE ++ Y + D++S GL L EM G P E+ P A F ++
Sbjct: 163 FVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKEDSRPPMAIFELL 222
Query: 397 N 397
+
Sbjct: 223 D 223
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 86/157 (54%), Gaps = 6/157 (3%)
Query: 231 REVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIA 290
REV++L + +PNVI + +I E ++ G L +L E ++L +
Sbjct: 63 REVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLA--EKESLTEEEATEFL 120
Query: 291 LDIARGMEYIHSQGVIHRDLKPENV-LIDQEF---HLKIADFGIACEEVYCDALSDDPGT 346
I G+ Y+HS + H DLKPEN+ L+D+ +KI DFG+A + + + + GT
Sbjct: 121 KQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGT 180
Query: 347 YRWMAPEMIKHKSYGRKVDVYSFGLILWEMVAGTIPY 383
++APE++ ++ G + D++S G+I + +++G P+
Sbjct: 181 PEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 96/201 (47%), Gaps = 6/201 (2%)
Query: 231 REVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIA 290
+E+ ++ L +P ++ + + ++ + L G LR +L + H KL
Sbjct: 64 KELQIMQGLEHPFLVNLWYSFQDEEDMFMVVDLLLGGDLRYHLQQNVHFKEETVKLFICE 123
Query: 291 LDIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIACEEVYCDALSDDPGTYRWM 350
L +A ++Y+ +Q +IHRD+KP+N+L+D+ H+ I DF IA ++ GT +M
Sbjct: 124 LVMA--LDYLQNQRIIHRDMKPDNILLDEHGHVHITDFNIAAMLPRETQITTMAGTKPYM 181
Query: 351 APEMI---KHKSYGRKVDVYSFGLILWEMVAGTIPYEEMNPIQAAFAV-VNKNLRPAIPG 406
APEM K Y VD +S G+ +E++ G PY + + V + P
Sbjct: 182 APEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSSKEIVHTFETTVVTYPS 241
Query: 407 DCPPAMAALIEQCWSLQPDKR 427
M +L+++ PD+R
Sbjct: 242 AWSQEMVSLLKKLLEPNPDQR 262
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 51/160 (31%), Positives = 85/160 (53%), Gaps = 8/160 (5%)
Query: 230 NREVALLSRL-HNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIA 288
+ E+ +L R +PN+I ++TE + G L + L K +
Sbjct: 68 SEEIEILLRYGQHPNIITLKDVYDDGKHVYLVTELMRGGELLDKI--LRQKFFSEREASF 125
Query: 289 IALDIARGMEYIHSQGVIHRDLKPENVL-IDQEFH---LKIADFGIACEEVYCDALSDDP 344
+ I + +EY+HSQGV+HRDLKP N+L +D+ + L+I DFG A + + L P
Sbjct: 126 VLHTIGKTVEYLHSQGVVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLMTP 185
Query: 345 G-TYRWMAPEMIKHKSYGRKVDVYSFGLILWEMVAGTIPY 383
T ++APE++K + Y D++S G++L+ M+AG P+
Sbjct: 186 CYTANFVAPEVLKRQGYDEGCDIWSLGILLYTMLAGYTPF 225
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 86/157 (54%), Gaps = 6/157 (3%)
Query: 231 REVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIA 290
REV++L + +PNVI + +I E ++ G L +L E ++L +
Sbjct: 63 REVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLA--EKESLTEEEATEFL 120
Query: 291 LDIARGMEYIHSQGVIHRDLKPENV-LIDQEF---HLKIADFGIACEEVYCDALSDDPGT 346
I G+ Y+HS + H DLKPEN+ L+D+ +KI DFG+A + + + + GT
Sbjct: 121 KQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGT 180
Query: 347 YRWMAPEMIKHKSYGRKVDVYSFGLILWEMVAGTIPY 383
++APE++ ++ G + D++S G+I + +++G P+
Sbjct: 181 PEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 73/266 (27%), Positives = 115/266 (43%), Gaps = 28/266 (10%)
Query: 174 HTVDLSQLFLGLRFAHGAHSRLYHGIYKDEPVAVKIIRIPDDDENETLAARLEKQFNREV 233
H D +L + + +RL +E VAVK I ++++ RE+
Sbjct: 16 HDSDRYELVKDIGSGNFGVARLMRDKQSNELVAVKYIE---------RGEKIDENVKREI 66
Query: 234 ALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSL-----RAYLHKLEHKTLPLPKLIA 288
L +PN+++F P ++ EY S G L A + +LI+
Sbjct: 67 INHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLIS 126
Query: 289 IALDIARGMEYIHSQGVIHRDLKPENVLIDQE--FHLKIADFGIACEEVYCDALSDDPGT 346
G+ Y H+ V HRDLK EN L+D LKI FG + V D GT
Sbjct: 127 -------GVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICAFGYSKSSVLHSQPKDTVGT 179
Query: 347 YRWMAPEMIKHKSY-GRKVDVYSFGLILWEMVAGTIPYEEMNPIQAAFAVVNK--NLRPA 403
++APE++ K Y G+ DV+S G+ L+ M+ G P+E+ + +++ N++ A
Sbjct: 180 PAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYA 239
Query: 404 IPG--DCPPAMAALIEQCWSLQPDKR 427
IP P LI + + P KR
Sbjct: 240 IPDYVHISPECRHLISRIFVADPAKR 265
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 86/157 (54%), Gaps = 6/157 (3%)
Query: 231 REVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIA 290
REV++L + +PNVI + +I E ++ G L +L E ++L +
Sbjct: 63 REVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLA--EKESLTEEEATEFL 120
Query: 291 LDIARGMEYIHSQGVIHRDLKPENV-LIDQEF---HLKIADFGIACEEVYCDALSDDPGT 346
I G+ Y+HS + H DLKPEN+ L+D+ +KI DFG+A + + + + GT
Sbjct: 121 KQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGT 180
Query: 347 YRWMAPEMIKHKSYGRKVDVYSFGLILWEMVAGTIPY 383
++APE++ ++ G + D++S G+I + +++G P+
Sbjct: 181 PAFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 60/248 (24%), Positives = 119/248 (47%), Gaps = 15/248 (6%)
Query: 187 FAHGAHSRLYHGIYKDEPV--AVKIIRIPDDDENETLAARLEKQFNREVALLSRLHNPNV 244
GA S + ++K + A KII + L+AR ++ RE + +L +PN+
Sbjct: 14 LGKGAFSVVRRCVHKTTGLEFAAKIIN------TKKLSARDFQKLEREARICRKLQHPNI 67
Query: 245 IKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIALDIARGMEYIHSQG 304
++ + ++ + ++ + ++ G L + + + I + Y HS G
Sbjct: 68 VRLHDSIQEESFHYLVFDLVTGGEL--FEDIVAREFYSEADASHCIQQILESIAYCHSNG 125
Query: 305 VIHRDLKPENVLIDQEFH---LKIADFGIACEEVYCDALSDDPGTYRWMAPEMIKHKSYG 361
++HR+LKPEN+L+ + +K+ADFG+A E +A GT +++PE++K Y
Sbjct: 126 IVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDPYS 185
Query: 362 RKVDVYSFGLILWEMVAGTIPY--EEMNPIQAAFAVVNKNLRPAIPGDCPPAMAALIEQC 419
+ VD+++ G+IL+ ++ G P+ E+ + + A + P +LI+
Sbjct: 186 KPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKSLIDSM 245
Query: 420 WSLQPDKR 427
++ P KR
Sbjct: 246 LTVNPKKR 253
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 60/245 (24%), Positives = 119/245 (48%), Gaps = 15/245 (6%)
Query: 190 GAHSRLYHGIYKDEPV--AVKIIRIPDDDENETLAARLEKQFNREVALLSRLHNPNVIKF 247
GA S + ++K + A KII + L+AR ++ RE + +L +PN+++
Sbjct: 16 GAFSVVRRCVHKTTGLEFAAKIIN------TKKLSARDFQKLEREARICRKLQHPNIVRL 69
Query: 248 VAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIALDIARGMEYIHSQGVIH 307
+ ++ + ++ + ++ G L + + + I + Y HS G++H
Sbjct: 70 HDSIQEESFHYLVFDLVTGGEL--FEDIVAREFYSEADASHCIQQILESIAYCHSNGIVH 127
Query: 308 RDLKPENVLIDQEFH---LKIADFGIACEEVYCDALSDDPGTYRWMAPEMIKHKSYGRKV 364
R+LKPEN+L+ + +K+ADFG+A E +A GT +++PE++K Y + V
Sbjct: 128 RNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDPYSKPV 187
Query: 365 DVYSFGLILWEMVAGTIPY--EEMNPIQAAFAVVNKNLRPAIPGDCPPAMAALIEQCWSL 422
D+++ G+IL+ ++ G P+ E+ + + A + P +LI+ ++
Sbjct: 188 DIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKSLIDSMLTV 247
Query: 423 QPDKR 427
P KR
Sbjct: 248 NPKKR 252
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 51/160 (31%), Positives = 85/160 (53%), Gaps = 8/160 (5%)
Query: 230 NREVALLSRL-HNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIA 288
+ E+ +L R +PN+I ++TE + G L + L K +
Sbjct: 68 SEEIEILLRYGQHPNIITLKDVYDDGKHVYLVTELMRGGELLDKI--LRQKFFSEREASF 125
Query: 289 IALDIARGMEYIHSQGVIHRDLKPENVL-IDQEFH---LKIADFGIACEEVYCDALSDDP 344
+ I + +EY+HSQGV+HRDLKP N+L +D+ + L+I DFG A + + L P
Sbjct: 126 VLHTIGKTVEYLHSQGVVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLMTP 185
Query: 345 G-TYRWMAPEMIKHKSYGRKVDVYSFGLILWEMVAGTIPY 383
T ++APE++K + Y D++S G++L+ M+AG P+
Sbjct: 186 CYTANFVAPEVLKRQGYDEGCDIWSLGILLYTMLAGYTPF 225
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 86/160 (53%), Gaps = 6/160 (3%)
Query: 225 LEKQFNREVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLP 284
+ Q RE+ +L ++P ++ F A + E++ GSL L K +P
Sbjct: 74 IRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKK--AGRIPEQ 131
Query: 285 KLIAIALDIARGMEYIHSQ-GVIHRDLKPENVLIDQEFHLKIADFGIACEEVYCDALSDD 343
L +++ + +G+ Y+ + ++HRD+KP N+L++ +K+ DFG++ + + D++++
Sbjct: 132 ILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLI--DSMANS 189
Query: 344 -PGTYRWMAPEMIKHKSYGRKVDVYSFGLILWEMVAGTIP 382
GT +M+PE ++ Y + D++S GL L EM G P
Sbjct: 190 FVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYP 229
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 49/158 (31%), Positives = 84/158 (53%), Gaps = 8/158 (5%)
Query: 232 EVALLSRL-HNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIA 290
E+ +L R +PN+I V+TE + G L + L K + A+
Sbjct: 65 EIEILLRYGQHPNIITLKDVYDDGKYVYVVTELMKGGELLDKI--LRQKFFSEREASAVL 122
Query: 291 LDIARGMEYIHSQGVIHRDLKPENVL-IDQEFH---LKIADFGIACEEVYCDALSDDPG- 345
I + +EY+H+QGV+HRDLKP N+L +D+ + ++I DFG A + + L P
Sbjct: 123 FTITKTVEYLHAQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLMTPCY 182
Query: 346 TYRWMAPEMIKHKSYGRKVDVYSFGLILWEMVAGTIPY 383
T ++APE+++ + Y D++S G++L+ M+ G P+
Sbjct: 183 TANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPF 220
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 86/160 (53%), Gaps = 6/160 (3%)
Query: 225 LEKQFNREVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLP 284
+ Q RE+ +L ++P ++ F A + E++ GSL L K +P
Sbjct: 47 IRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKK--AGRIPEQ 104
Query: 285 KLIAIALDIARGMEYIHSQ-GVIHRDLKPENVLIDQEFHLKIADFGIACEEVYCDALSDD 343
L +++ + +G+ Y+ + ++HRD+KP N+L++ +K+ DFG++ + + D++++
Sbjct: 105 ILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLI--DSMANS 162
Query: 344 -PGTYRWMAPEMIKHKSYGRKVDVYSFGLILWEMVAGTIP 382
GT +M+PE ++ Y + D++S GL L EM G P
Sbjct: 163 FVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYP 202
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 60/248 (24%), Positives = 119/248 (47%), Gaps = 15/248 (6%)
Query: 187 FAHGAHSRLYHGIYKDEPV--AVKIIRIPDDDENETLAARLEKQFNREVALLSRLHNPNV 244
GA S + ++K + A KII + L+AR ++ RE + +L +PN+
Sbjct: 14 LGKGAFSVVRRCVHKTTGLEFAAKIIN------TKKLSARDFQKLEREARICRKLQHPNI 67
Query: 245 IKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIALDIARGMEYIHSQG 304
++ + ++ + ++ + ++ G L + + + I + Y HS G
Sbjct: 68 VRLHDSIQEESFHYLVFDLVTGGEL--FEDIVAREFYSEADASHCIQQILESIAYCHSNG 125
Query: 305 VIHRDLKPENVLIDQEFH---LKIADFGIACEEVYCDALSDDPGTYRWMAPEMIKHKSYG 361
++HR+LKPEN+L+ + +K+ADFG+A E +A GT +++PE++K Y
Sbjct: 126 IVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDPYS 185
Query: 362 RKVDVYSFGLILWEMVAGTIPY--EEMNPIQAAFAVVNKNLRPAIPGDCPPAMAALIEQC 419
+ VD+++ G+IL+ ++ G P+ E+ + + A + P +LI+
Sbjct: 186 KPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKSLIDSM 245
Query: 420 WSLQPDKR 427
++ P KR
Sbjct: 246 LTVNPKKR 253
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 86/160 (53%), Gaps = 6/160 (3%)
Query: 225 LEKQFNREVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLP 284
+ Q RE+ +L ++P ++ F A + E++ GSL L K +P
Sbjct: 47 IRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKK--AGRIPEQ 104
Query: 285 KLIAIALDIARGMEYIHSQ-GVIHRDLKPENVLIDQEFHLKIADFGIACEEVYCDALSDD 343
L +++ + +G+ Y+ + ++HRD+KP N+L++ +K+ DFG++ + + D++++
Sbjct: 105 ILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLI--DSMANS 162
Query: 344 -PGTYRWMAPEMIKHKSYGRKVDVYSFGLILWEMVAGTIP 382
GT +M+PE ++ Y + D++S GL L EM G P
Sbjct: 163 FVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYP 202
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 86/160 (53%), Gaps = 6/160 (3%)
Query: 225 LEKQFNREVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLP 284
+ Q RE+ +L ++P ++ F A + E++ GSL L K +P
Sbjct: 47 IRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKK--AGRIPEQ 104
Query: 285 KLIAIALDIARGMEYIHSQ-GVIHRDLKPENVLIDQEFHLKIADFGIACEEVYCDALSDD 343
L +++ + +G+ Y+ + ++HRD+KP N+L++ +K+ DFG++ + + D++++
Sbjct: 105 ILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLI--DSMANS 162
Query: 344 -PGTYRWMAPEMIKHKSYGRKVDVYSFGLILWEMVAGTIP 382
GT +M+PE ++ Y + D++S GL L EM G P
Sbjct: 163 FVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYP 202
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 86/160 (53%), Gaps = 6/160 (3%)
Query: 225 LEKQFNREVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLP 284
+ Q RE+ +L ++P ++ F A + E++ GSL L K +P
Sbjct: 47 IRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKK--AGRIPEQ 104
Query: 285 KLIAIALDIARGMEYIHSQ-GVIHRDLKPENVLIDQEFHLKIADFGIACEEVYCDALSDD 343
L +++ + +G+ Y+ + ++HRD+KP N+L++ +K+ DFG++ + + D++++
Sbjct: 105 ILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLI--DSMANS 162
Query: 344 -PGTYRWMAPEMIKHKSYGRKVDVYSFGLILWEMVAGTIP 382
GT +M+PE ++ Y + D++S GL L EM G P
Sbjct: 163 FVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYP 202
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 90/181 (49%), Gaps = 11/181 (6%)
Query: 206 AVKIIRIPDDDENETLAARLEKQFNREVALLSRLHNPNVIKFVAACKKPPVYCVITEYLS 265
A+KII+ A L+ EVA+L +L +PN++K + Y ++ E
Sbjct: 50 AIKIIKKSSVTTTSNSGALLD-----EVAVLKQLDHPNIMKLYEFFEDKRNYYLVMEVYR 104
Query: 266 EGSLRAYLHKLEHKTLPLPKLIAIALDIARGMEYIHSQGVIHRDLKPENVLIDQEFH--- 322
G L + + + I + G Y+H ++HRDLKPEN+L++ +
Sbjct: 105 GGEL--FDEIILRQKFSEVDAAVIMKQVLSGTTYLHKHNIVHRDLKPENLLLESKSRDAL 162
Query: 323 LKIADFGIACEEVYCDALSDDPGTYRWMAPEMIKHKSYGRKVDVYSFGLILWEMVAGTIP 382
+KI DFG++ + + GT ++APE+++ K Y K DV+S G+IL+ ++ G P
Sbjct: 163 IKIVDFGLSAHFEVGGKMKERLGTAYYIAPEVLR-KKYDEKCDVWSCGVILYILLCGYPP 221
Query: 383 Y 383
+
Sbjct: 222 F 222
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 79/283 (27%), Positives = 123/283 (43%), Gaps = 55/283 (19%)
Query: 188 AHGAHSRLYHGIYKDEPVAVKIIRIPDDDENETLAARLEKQFNREVALLSRLHNPNVIKF 247
A G ++ +E VAVKI I D + Q EV L + + N+++F
Sbjct: 33 ARGRFGCVWKAQLLNEYVAVKIFPIQD---------KQSWQNEYEVYSLPGMKHENILQF 83
Query: 248 VAACKKPPVYCV----ITEYLSEGSLRAYLHKLEHKTLPLPKLIAIALDIARGMEYIHSQ 303
+ A K+ V IT + +GSL +L + + +L IA +ARG+ Y+H
Sbjct: 84 IGAEKRGTSVDVDLWLITAFHEKGSLSDFL---KANVVSWNELCHIAETMARGLAYLHED 140
Query: 304 ----------GVIHRDLKPENVLIDQEFHLKIADFGIACEEVYCDALSD---DPGTYRWM 350
+ HRD+K +NVL+ IADFG+A + + D GT R+M
Sbjct: 141 IPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLALKFEAGKSAGDTHGQVGTRRYM 200
Query: 351 APEMIK-----HKSYGRKVDVYSFGLILWEM----VAGTIPYEE-MNPIQAAFA------ 394
APE+++ + ++D+Y+ GL+LWE+ A P +E M P +
Sbjct: 201 APEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYMLPFEEEIGQHPSLE 260
Query: 395 -----VVNKNLRPAIPG--DCPPAMAAL---IEQCWSLQPDKR 427
VV+K RP + MA L IE+CW + R
Sbjct: 261 DMQEVVVHKKKRPVLRDYWQKHAGMAMLCETIEECWDHDAEAR 303
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 76/266 (28%), Positives = 127/266 (47%), Gaps = 31/266 (11%)
Query: 187 FAHGAHSRL-YHGIYKDEPVAVKIIRIPDDDENETLAARLEKQFNREVALLSRL-HNPNV 244
HGA + Y G++ + VAVK I +P E + A +REV LL +PNV
Sbjct: 32 LGHGAEGTIVYRGMFDNRDVAVKRI-LP---ECFSFA-------DREVQLLRESDEHPNV 80
Query: 245 IKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIALDIARGMEYIHSQG 304
I++ K + E L +L+ Y+ + + L L I + G+ ++HS
Sbjct: 81 IRYFCTEKDRQFQYIAIE-LCAATLQEYVEQKDFAHLGLEP-ITLLQQTTSGLAHLHSLN 138
Query: 305 VIHRDLKPENVLIDQ-----EFHLKIADFGIACEEVYC-----DALSDDPGTYRWMAPEM 354
++HRDLKP N+LI + I+DFG+ C+++ S PGT W+APEM
Sbjct: 139 IVHRDLKPHNILISMPNAHGKIKAMISDFGL-CKKLAVGRHSFSRRSGVPGTEGWIAPEM 197
Query: 355 IKH---KSYGRKVDVYSFGLILWEMVA-GTIPYEEMNPIQAAFAVVNKNLRPAIPGDCPP 410
+ ++ VD++S G + + +++ G+ P+ + QA + +L P
Sbjct: 198 LSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQRQANILLGACSLDCLHPEKHED 257
Query: 411 AMA-ALIEQCWSLQPDKRPEFWHIVK 435
+A LIE+ ++ P KRP H++K
Sbjct: 258 VIARELIEKMIAMDPQKRPSAKHVLK 283
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/231 (27%), Positives = 96/231 (41%), Gaps = 14/231 (6%)
Query: 158 FDHGGVRVNAVDAADEHTVDLSQLFLGLRFAHGAHSRLYHGIYKDEPVAVKIIRIPDDDE 217
D V +D H D + + +RL E VAVK I
Sbjct: 1 MDRAPVTTGPLDMPIMHDSDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIE------ 54
Query: 218 NETLAARLEKQFNREVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLE 277
A +++ RE+ L +PN+++F P +I EY S G L +
Sbjct: 55 ---RGAAIDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIIMEYASGGELYERICNAG 111
Query: 278 HKTLPLPKLIAIALDIARGMEYIHSQGVIHRDLKPENVLIDQE--FHLKIADFGIACEEV 335
+ + L G+ Y HS + HRDLK EN L+D LKI DFG + V
Sbjct: 112 RFSEDEARFFFQQL--LSGVSYCHSMQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSV 169
Query: 336 YCDALSDDPGTYRWMAPEMIKHKSY-GRKVDVYSFGLILWEMVAGTIPYEE 385
GT ++APE++ + Y G+ DV+S G+ L+ M+ G P+E+
Sbjct: 170 LHSQPKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFED 220
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 90/181 (49%), Gaps = 11/181 (6%)
Query: 206 AVKIIRIPDDDENETLAARLEKQFNREVALLSRLHNPNVIKFVAACKKPPVYCVITEYLS 265
A+KII+ A L+ EVA+L +L +PN++K + Y ++ E
Sbjct: 33 AIKIIKKSSVTTTSNSGALLD-----EVAVLKQLDHPNIMKLYEFFEDKRNYYLVMEVYR 87
Query: 266 EGSLRAYLHKLEHKTLPLPKLIAIALDIARGMEYIHSQGVIHRDLKPENVLIDQEFH--- 322
G L + + + I + G Y+H ++HRDLKPEN+L++ +
Sbjct: 88 GGEL--FDEIILRQKFSEVDAAVIMKQVLSGTTYLHKHNIVHRDLKPENLLLESKSRDAL 145
Query: 323 LKIADFGIACEEVYCDALSDDPGTYRWMAPEMIKHKSYGRKVDVYSFGLILWEMVAGTIP 382
+KI DFG++ + + GT ++APE+++ K Y K DV+S G+IL+ ++ G P
Sbjct: 146 IKIVDFGLSAHFEVGGKMKERLGTAYYIAPEVLR-KKYDEKCDVWSCGVILYILLCGYPP 204
Query: 383 Y 383
+
Sbjct: 205 F 205
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 87/161 (54%), Gaps = 6/161 (3%)
Query: 227 KQFNREVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKL 286
++ REV +L + +PN+I + +I E +S G L +L E ++L +
Sbjct: 60 EEIEREVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFL--AEKESLTEDEA 117
Query: 287 IAIALDIARGMEYIHSQGVIHRDLKPENV-LIDQEF---HLKIADFGIACEEVYCDALSD 342
I G+ Y+HS+ + H DLKPEN+ L+D+ +K+ DFGIA + + +
Sbjct: 118 TQFLKQILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKN 177
Query: 343 DPGTYRWMAPEMIKHKSYGRKVDVYSFGLILWEMVAGTIPY 383
GT ++APE++ ++ G + D++S G+I + +++G P+
Sbjct: 178 IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 218
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/196 (31%), Positives = 94/196 (47%), Gaps = 16/196 (8%)
Query: 190 GAHSRLYHGIYKDEPVAVKIIRIPDDDENETLAARLEKQFNREVALLSRLHNPNVIK--- 246
GA+ + I K V I ++ ++E A R RE+ LL + + NVI
Sbjct: 53 GAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRA----YRELLLLKHMQHENVIGLLD 108
Query: 247 -FVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIALDIARGMEYIHSQGV 305
F A Y YL ++ L K+ K+ + + +G++YIHS GV
Sbjct: 109 VFTPASSLRNFYDF---YLVMPFMQTDLQKIMGMEFSEEKIQYLVYQMLKGLKYIHSAGV 165
Query: 306 IHRDLKPENVLIDQEFHLKIADFGIACEEVYCDALSDDPGTYRWM-APEMI-KHKSYGRK 363
+HRDLKP N+ ++++ LKI DFG+A + DA RW APE+I Y +
Sbjct: 166 VHRDLKPGNLAVNEDCELKILDFGLAR---HADAEMTGYVVTRWYRAPEVILSWMHYNQT 222
Query: 364 VDVYSFGLILWEMVAG 379
VD++S G I+ EM+ G
Sbjct: 223 VDIWSVGCIMAEMLTG 238
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 100/213 (46%), Gaps = 12/213 (5%)
Query: 224 RLEKQFNREVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPL 283
RLE E+ + L +P ++ A ++ P + E L GSL + E LP
Sbjct: 108 RLEVFRAEELMACAGLTSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLVK--EQGCLPE 165
Query: 284 PKLIAIALDIARGMEYIHSQGVIHRDLKPENVLIDQEF-HLKIADFGIAC----EEVYCD 338
+ + G+EY+HS+ ++H D+K +NVL+ + H + DFG A + + D
Sbjct: 166 DRALYYLGQALEGLEYLHSRRILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKD 225
Query: 339 ALSDD--PGTYRWMAPEMIKHKSYGRKVDVYSFGLILWEMVAGTIPYEEM--NPIQAAFA 394
L+ D PGT MAPE++ +S KVDV+S ++ M+ G P+ + P+ A
Sbjct: 226 LLTGDYIPGTETHMAPEVVLGRSCDAKVDVWSSCCMMLHMLNGCHPWTQFFRGPLCLKIA 285
Query: 395 VVNKNLRPAIPGDCPPAMAALIEQCWSLQPDKR 427
+R IP C P A I++ +P R
Sbjct: 286 SEPPPVR-EIPPSCAPLTAQAIQEGLRKEPIHR 317
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 87/161 (54%), Gaps = 6/161 (3%)
Query: 227 KQFNREVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKL 286
++ REV +L + +PN+I + +I E +S G L +L E ++L +
Sbjct: 53 EEIEREVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFL--AEKESLTEDEA 110
Query: 287 IAIALDIARGMEYIHSQGVIHRDLKPENV-LIDQEF---HLKIADFGIACEEVYCDALSD 342
I G+ Y+HS+ + H DLKPEN+ L+D+ +K+ DFGIA + + +
Sbjct: 111 TQFLKQILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKN 170
Query: 343 DPGTYRWMAPEMIKHKSYGRKVDVYSFGLILWEMVAGTIPY 383
GT ++APE++ ++ G + D++S G+I + +++G P+
Sbjct: 171 IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 211
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 78/314 (24%), Positives = 126/314 (40%), Gaps = 70/314 (22%)
Query: 170 AADEHTVDLSQLFLGLRFAHGAHSRLYHGIYKDEPVAVKIIRIPDDDENETLAARLEKQF 229
AA E ++DL L L G + +Y G + PVAVK+ + A R
Sbjct: 4 AASEPSLDLDNLKLLELIGRGRYGAVYKGSLDERPVAVKVF---------SFANRQNFIN 54
Query: 230 NREVALLSRLHNPNVIKFVAACKKPPV-----YCVITEYLSEGSLRAYLHKLEHKTLPLP 284
+ + + + + N+ +F+ ++ Y ++ EY GSL YL +
Sbjct: 55 EKNIYRVPLMEHDNIARFIVGDERVTADGRMEYLLVMEYYPNGSLXKYLSLHTSDWVSSC 114
Query: 285 KLIAIALDIARGMEYIHSQ---------GVIHRDLKPENVLIDQEFHLKIADFGIAC--- 332
+L A + RG+ Y+H++ + HRDL NVL+ + I+DFG++
Sbjct: 115 RL---AHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLT 171
Query: 333 --------EEVYCDALSDDPGTYRWMAPEMIK-------HKSYGRKVDVYSFGLILWEMV 377
EE +A + GT R+MAPE+++ +S ++VD+Y+ GLI WE+
Sbjct: 172 GNRLVRPGEE--DNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIF 229
Query: 378 ---AGTIPYEEMNPIQAAFA---------------VVNKNLRPAIPGDCPPAMAAL---- 415
P E + Q AF V + RP P A+
Sbjct: 230 MRCTDLFPGESVPEYQMAFQTEVGNHPTFEDMQVLVSREKQRPKFPEAWKENSLAVRSLK 289
Query: 416 --IEQCWSLQPDKR 427
IE CW + R
Sbjct: 290 ETIEDCWDQDAEAR 303
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 87/161 (54%), Gaps = 6/161 (3%)
Query: 227 KQFNREVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKL 286
++ REV +L + +PN+I + +I E +S G L +L E ++L +
Sbjct: 74 EEIEREVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFL--AEKESLTEDEA 131
Query: 287 IAIALDIARGMEYIHSQGVIHRDLKPENV-LIDQEF---HLKIADFGIACEEVYCDALSD 342
I G+ Y+HS+ + H DLKPEN+ L+D+ +K+ DFGIA + + +
Sbjct: 132 TQFLKQILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKN 191
Query: 343 DPGTYRWMAPEMIKHKSYGRKVDVYSFGLILWEMVAGTIPY 383
GT ++APE++ ++ G + D++S G+I + +++G P+
Sbjct: 192 IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 232
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/155 (31%), Positives = 82/155 (52%), Gaps = 6/155 (3%)
Query: 231 REVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKL-EHKTLPLPKLIAI 289
RE+ +L + N+I + P + + Y+ + + L+KL + + L +
Sbjct: 72 REIKILLAFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYF 131
Query: 290 ALDIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIA----CEEVYCDALSDDPG 345
I RG++YIHS V+HRDLKP N+L++ LKI DFG+A + + L++
Sbjct: 132 LYQILRGLKYIHSANVLHRDLKPSNLLLNTTSDLKICDFGLARVADPDHDHTGFLTEYVA 191
Query: 346 TYRWMAPE-MIKHKSYGRKVDVYSFGLILWEMVAG 379
T + APE M+ K Y + +D++S G IL EM++
Sbjct: 192 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN 226
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/155 (31%), Positives = 82/155 (52%), Gaps = 6/155 (3%)
Query: 231 REVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKL-EHKTLPLPKLIAI 289
RE+ +L + N+I + P + + Y+ + + L+KL + + L +
Sbjct: 72 REIKILLAFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYF 131
Query: 290 ALDIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIA----CEEVYCDALSDDPG 345
I RG++YIHS V+HRDLKP N+L++ LKI DFG+A + + L++
Sbjct: 132 LYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA 191
Query: 346 TYRWMAPE-MIKHKSYGRKVDVYSFGLILWEMVAG 379
T + APE M+ K Y + +D++S G IL EM++
Sbjct: 192 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN 226
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/196 (31%), Positives = 94/196 (47%), Gaps = 16/196 (8%)
Query: 190 GAHSRLYHGIYKDEPVAVKIIRIPDDDENETLAARLEKQFNREVALLSRLHNPNVIK--- 246
GA+ + I K V I ++ ++E A R RE+ LL + + NVI
Sbjct: 35 GAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRA----YRELLLLKHMQHENVIGLLD 90
Query: 247 -FVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIALDIARGMEYIHSQGV 305
F A Y YL ++ L K+ K+ + + +G++YIHS GV
Sbjct: 91 VFTPASSLRNFYDF---YLVMPFMQTDLQKIMGLKFSEEKIQYLVYQMLKGLKYIHSAGV 147
Query: 306 IHRDLKPENVLIDQEFHLKIADFGIACEEVYCDALSDDPGTYRWM-APEMI-KHKSYGRK 363
+HRDLKP N+ ++++ LKI DFG+A + DA RW APE+I Y +
Sbjct: 148 VHRDLKPGNLAVNEDCELKILDFGLAR---HADAEMTGYVVTRWYRAPEVILSWMHYNQT 204
Query: 364 VDVYSFGLILWEMVAG 379
VD++S G I+ EM+ G
Sbjct: 205 VDIWSVGCIMAEMLTG 220
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 96/196 (48%), Gaps = 14/196 (7%)
Query: 196 YHGIYKDEPVAVKIIRIPDDDENETLA---ARLEKQFN-------REVALLSRLHNPNVI 245
YHG+ K ++ ++ ET A RLEK+ RE+++L L + N++
Sbjct: 4 YHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIV 63
Query: 246 KFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIALDIARGMEYIHSQGV 305
K ++ E+L + L+ L E L + L + G+ Y H + V
Sbjct: 64 KLYDVIHTKKRLVLVFEHLDQ-DLKKLLDVCE-GGLESVTAKSFLLQLLNGIAYCHDRRV 121
Query: 306 IHRDLKPENVLIDQEFHLKIADFGIA-CEEVYCDALSDDPGTYRWMAPE-MIKHKSYGRK 363
+HRDLKP+N+LI++E LKIADFG+A + + + T + AP+ ++ K Y
Sbjct: 122 LHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVVTLWYRAPDVLMGSKKYSTT 181
Query: 364 VDVYSFGLILWEMVAG 379
+D++S G I EMV G
Sbjct: 182 IDIWSVGCIFAEMVNG 197
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/234 (21%), Positives = 117/234 (50%), Gaps = 22/234 (9%)
Query: 221 LAARLEKQFNREVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKT 280
++++ ++ REVA+L+ + +PN++++ + ++ ++ +Y G L ++ +
Sbjct: 62 MSSKEREESRREVAVLANMKHPNIVQYRESFEENGSLYIVMDYCEGGDLFKRINAQKGVL 121
Query: 281 LPLPKLIAIALDIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIA-CEEVYCDA 339
+++ + I ++++H + ++HRD+K +N+ + ++ +++ DFGIA +
Sbjct: 122 FQEDQILDWFVQICLALKHVHDRKILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTVEL 181
Query: 340 LSDDPGTYRWMAPEMIKHKSYGRKVDVYSFGLILWEMVAGTIPYEEMNPIQAAFAVVNKN 399
GT +++PE+ ++K Y K D+++ G +L+E+ +E A ++ N
Sbjct: 182 ARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFE-------AGSMKNLV 234
Query: 400 LRPAIPGDCPPA-------MAALIEQCWSLQPDKRP------EFWHIVKVLEQF 440
L+ I G PP + +L+ Q + P RP E I K +E+F
Sbjct: 235 LK-IISGSFPPVSLHYSYDLRSLVSQLFKRNPRDRPSVNSILEKGFIAKRIEKF 287
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 109/216 (50%), Gaps = 29/216 (13%)
Query: 187 FAHGAHSRLYHGI--YKDEPVAVKIIRIPDDDENETLAARLEKQFNREVALLSRLH-NPN 243
GAH+R+ I + AVKII E + + REV +L + + N
Sbjct: 21 LGEGAHARVQTCINLITSQEYAVKII--------EKQPGHIRSRVFREVEMLYQCQGHRN 72
Query: 244 VIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIALDIARGMEYIHSQ 303
V++ + ++ + ++ E + GS+ +++HK H + + D+A ++++H++
Sbjct: 73 VLELIEFFEEEDRFYLVFEKMRGGSILSHIHKRRH--FNELEASVVVQDVASALDFLHNK 130
Query: 304 GVIHRDLKPENVLI---DQEFHLKIADFGIA--------CEEVYCDALSDDPGTYRWMAP 352
G+ HRDLKPEN+L +Q +KI DFG+ C + L G+ +MAP
Sbjct: 131 GIAHRDLKPENILCEHPNQVSPVKICDFGLGSGIKLNGDCSPISTPELLTPCGSAEYMAP 190
Query: 353 EMIKHKS-----YGRKVDVYSFGLILWEMVAGTIPY 383
E+++ S Y ++ D++S G+IL+ +++G P+
Sbjct: 191 EVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPF 226
>pdb|4ALU|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 102/220 (46%), Gaps = 32/220 (14%)
Query: 220 TLAARLEKQFNREVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSE-GSLRAYLHKLEH 278
L ++ F+ + LL P+ FV ++P + ++++E G+L+ L +
Sbjct: 106 VLLKKVSSGFSGVIRLLDWFERPD--SFVLILERPEPVQDLFDFITERGALQEELAR--- 160
Query: 279 KTLPLPKLIAIALDIARGMEYIHSQGVIHRDLKPENVLID-QEFHLKIADFGIAC---EE 334
+ + + + H+ GV+HRD+K EN+LID LK+ DFG +
Sbjct: 161 ---------SFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT 211
Query: 335 VYCDALSDDPGTYRWMAPEMIK-HKSYGRKVDVYSFGLILWEMVAGTIPYEEMNPIQAAF 393
VY +D GT + PE I+ H+ +GR V+S G++L++MV G IP+E I
Sbjct: 212 VY----TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQ 267
Query: 394 AVVNKNLRPAIPGDCPPAMAALIEQCWSLQPDKRPEFWHI 433
R + +C LI C +L+P RP F I
Sbjct: 268 VF----FRQRVSSEC----QHLIRWCLALRPSDRPTFEEI 299
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 85/158 (53%), Gaps = 12/158 (7%)
Query: 233 VALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIALD 292
++L+S P ++ A P I + ++ G L + H +H + A +
Sbjct: 243 LSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDL--HYHLSQHGVFSEADMRFYAAE 300
Query: 293 IARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIACEEVYCDALSDDP----GTYR 348
I G+E++H++ V++RDLKP N+L+D+ H++I+D G+A CD P GT+
Sbjct: 301 IILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLA-----CDFSKKKPHASVGTHG 355
Query: 349 WMAPEMI-KHKSYGRKVDVYSFGLILWEMVAGTIPYEE 385
+MAPE++ K +Y D +S G +L++++ G P+ +
Sbjct: 356 YMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQ 393
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 85/158 (53%), Gaps = 12/158 (7%)
Query: 233 VALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIALD 292
++L+S P ++ A P I + ++ G L + H +H + A +
Sbjct: 242 LSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDL--HYHLSQHGVFSEADMRFYAAE 299
Query: 293 IARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIACEEVYCDALSDDP----GTYR 348
I G+E++H++ V++RDLKP N+L+D+ H++I+D G+A CD P GT+
Sbjct: 300 IILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLA-----CDFSKKKPHASVGTHG 354
Query: 349 WMAPEMI-KHKSYGRKVDVYSFGLILWEMVAGTIPYEE 385
+MAPE++ K +Y D +S G +L++++ G P+ +
Sbjct: 355 YMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQ 392
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 85/158 (53%), Gaps = 12/158 (7%)
Query: 233 VALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIALD 292
++L+S P ++ A P I + ++ G L + H +H + A +
Sbjct: 243 LSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDL--HYHLSQHGVFSEADMRFYAAE 300
Query: 293 IARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIACEEVYCDALSDDP----GTYR 348
I G+E++H++ V++RDLKP N+L+D+ H++I+D G+A CD P GT+
Sbjct: 301 IILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLA-----CDFSKKKPHASVGTHG 355
Query: 349 WMAPEMI-KHKSYGRKVDVYSFGLILWEMVAGTIPYEE 385
+MAPE++ K +Y D +S G +L++++ G P+ +
Sbjct: 356 YMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQ 393
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 85/158 (53%), Gaps = 12/158 (7%)
Query: 233 VALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIALD 292
++L+S P ++ A P I + ++ G L + H +H + A +
Sbjct: 243 LSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDL--HYHLSQHGVFSEADMRFYAAE 300
Query: 293 IARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIACEEVYCDALSDDP----GTYR 348
I G+E++H++ V++RDLKP N+L+D+ H++I+D G+A CD P GT+
Sbjct: 301 IILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLA-----CDFSKKKPHASVGTHG 355
Query: 349 WMAPEMI-KHKSYGRKVDVYSFGLILWEMVAGTIPYEE 385
+MAPE++ K +Y D +S G +L++++ G P+ +
Sbjct: 356 YMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQ 393
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 72/266 (27%), Positives = 114/266 (42%), Gaps = 28/266 (10%)
Query: 174 HTVDLSQLFLGLRFAHGAHSRLYHGIYKDEPVAVKIIRIPDDDENETLAARLEKQFNREV 233
H D +L + + +RL +E VAVK I ++++ RE+
Sbjct: 16 HDSDRYELVKDIGSGNFGVARLMRDKQSNELVAVKYIE---------RGEKIDENVKREI 66
Query: 234 ALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSL-----RAYLHKLEHKTLPLPKLIA 288
L +PN+++F P ++ EY S G L A + +LI+
Sbjct: 67 INHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLIS 126
Query: 289 IALDIARGMEYIHSQGVIHRDLKPENVLIDQE--FHLKIADFGIACEEVYCDALSDDPGT 346
G+ Y H+ V HRDLK EN L+D LKI FG + V GT
Sbjct: 127 -------GVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICAFGYSKSSVLHSQPKSTVGT 179
Query: 347 YRWMAPEMIKHKSY-GRKVDVYSFGLILWEMVAGTIPYEEMNPIQAAFAVVNK--NLRPA 403
++APE++ K Y G+ DV+S G+ L+ M+ G P+E+ + +++ N++ A
Sbjct: 180 PAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYA 239
Query: 404 IPG--DCPPAMAALIEQCWSLQPDKR 427
IP P LI + + P KR
Sbjct: 240 IPDYVHISPECRHLISRIFVADPAKR 265
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 54/189 (28%), Positives = 92/189 (48%), Gaps = 16/189 (8%)
Query: 267 GSLRAYLHKLEHKTLPLPKLIAIALDIARGMEYIHSQ-GVIHRDLKPENVLIDQEFHLKI 325
G+ L K +P L + + I + + Y+ + GVIHRD+KP N+L+D+ +K+
Sbjct: 107 GTCAEKLKKRMQGPIPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILLDERGQIKL 166
Query: 326 ADFGIACEEVYCDALSDDPGTYRWMAPEMIK-----HKSYGRKVDVYSFGLILWEMVAGT 380
DFGI+ V A G +MAPE I Y + DV+S G+ L E+ G
Sbjct: 167 CDFGISGRLVDDKAKDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQ 226
Query: 381 IPYEEMNPIQAAFAVVNKNLR---PAIPG--DCPPAMAALIEQCWSLQPDKRPEFWHIVK 435
PY+ + F V+ K L+ P +PG + ++ C + KRP++ +++
Sbjct: 227 FPYKN---CKTDFEVLTKVLQEEPPLLPGHMGFSGDFQSFVKDCLTKDHRKRPKYNKLLE 283
Query: 436 --VLEQFET 442
++++ET
Sbjct: 284 HSFIKRYET 292
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 100/211 (47%), Gaps = 13/211 (6%)
Query: 227 KQFNREVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSL--RAYLHKLEHKTLPLP 284
+Q E+ +L L +PN+IK + ++ E G L R + K L
Sbjct: 65 EQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMYIVMETCEGGELLERIVSAQARGKALSEG 124
Query: 285 KLIAIALDIARGMEYIHSQGVIHRDLKPENVLI-DQEFH--LKIADFGIACEEVYCDALS 341
+ + + + Y HSQ V+H+DLKPEN+L D H +KI DFG+A E D S
Sbjct: 125 YVAELMKQMMNALAYFHSQHVVHKDLKPENILFQDTSPHSPIKIIDFGLA-ELFKSDEHS 183
Query: 342 DD-PGTYRWMAPEMIKHKSYGRKVDVYSFGLILWEMVAGTIPYEEMNPIQAAFAVVNKNL 400
+ GT +MAPE+ K + K D++S G++++ ++ G +P+ + + K
Sbjct: 184 TNAAGTALYMAPEVFK-RDVTFKCDIWSAGVVMYFLLTGCLPFTGTSLEEVQQKATYK-- 240
Query: 401 RPAIPGDC---PPAMAALIEQCWSLQPDKRP 428
P +C P L++Q + P++RP
Sbjct: 241 EPNYAVECRPLTPQAVDLLKQMLTKDPERRP 271
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 89/161 (55%), Gaps = 6/161 (3%)
Query: 227 KQFNREVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKL 286
++ REV++L ++ + NVI + +I E +S G L +L + E +L +
Sbjct: 60 EEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKE--SLSEEEA 117
Query: 287 IAIALDIARGMEYIHSQGVIHRDLKPENV-LIDQEF---HLKIADFGIACEEVYCDALSD 342
+ I G+ Y+H++ + H DLKPEN+ L+D+ H+K+ DFG+A E +
Sbjct: 118 TSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKN 177
Query: 343 DPGTYRWMAPEMIKHKSYGRKVDVYSFGLILWEMVAGTIPY 383
GT ++APE++ ++ G + D++S G+I + +++G P+
Sbjct: 178 IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 218
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 89/161 (55%), Gaps = 6/161 (3%)
Query: 227 KQFNREVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKL 286
++ REV++L ++ + NVI + +I E +S G L +L + E +L +
Sbjct: 60 EEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKE--SLSEEEA 117
Query: 287 IAIALDIARGMEYIHSQGVIHRDLKPENV-LIDQEF---HLKIADFGIACEEVYCDALSD 342
+ I G+ Y+H++ + H DLKPEN+ L+D+ H+K+ DFG+A E +
Sbjct: 118 TSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKN 177
Query: 343 DPGTYRWMAPEMIKHKSYGRKVDVYSFGLILWEMVAGTIPY 383
GT ++APE++ ++ G + D++S G+I + +++G P+
Sbjct: 178 IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 218
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 89/161 (55%), Gaps = 6/161 (3%)
Query: 227 KQFNREVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKL 286
++ REV++L ++ + NVI + +I E +S G L +L + E +L +
Sbjct: 60 EEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKE--SLSEEEA 117
Query: 287 IAIALDIARGMEYIHSQGVIHRDLKPENV-LIDQEF---HLKIADFGIACEEVYCDALSD 342
+ I G+ Y+H++ + H DLKPEN+ L+D+ H+K+ DFG+A E +
Sbjct: 118 TSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKN 177
Query: 343 DPGTYRWMAPEMIKHKSYGRKVDVYSFGLILWEMVAGTIPY 383
GT ++APE++ ++ G + D++S G+I + +++G P+
Sbjct: 178 IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 218
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 89/161 (55%), Gaps = 6/161 (3%)
Query: 227 KQFNREVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKL 286
++ REV++L ++ + NVI + +I E +S G L +L + E +L +
Sbjct: 60 EEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKE--SLSEEEA 117
Query: 287 IAIALDIARGMEYIHSQGVIHRDLKPENV-LIDQEF---HLKIADFGIACEEVYCDALSD 342
+ I G+ Y+H++ + H DLKPEN+ L+D+ H+K+ DFG+A E +
Sbjct: 118 TSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKN 177
Query: 343 DPGTYRWMAPEMIKHKSYGRKVDVYSFGLILWEMVAGTIPY 383
GT ++APE++ ++ G + D++S G+I + +++G P+
Sbjct: 178 IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 218
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 89/161 (55%), Gaps = 6/161 (3%)
Query: 227 KQFNREVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKL 286
++ REV++L ++ + NVI + +I E +S G L +L + E +L +
Sbjct: 60 EEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKE--SLSEEEA 117
Query: 287 IAIALDIARGMEYIHSQGVIHRDLKPENV-LIDQEF---HLKIADFGIACEEVYCDALSD 342
+ I G+ Y+H++ + H DLKPEN+ L+D+ H+K+ DFG+A E +
Sbjct: 118 TSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKN 177
Query: 343 DPGTYRWMAPEMIKHKSYGRKVDVYSFGLILWEMVAGTIPY 383
GT ++APE++ ++ G + D++S G+I + +++G P+
Sbjct: 178 IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 218
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 52/157 (33%), Positives = 84/157 (53%), Gaps = 7/157 (4%)
Query: 227 KQFNREVALLSRLHNPNVIKFVAACKKPPVYCVITE-YLSEGSLRAYLHKL-EHKTLPLP 284
K+ RE+ LL + + NVI + T+ YL + L KL +H+ L
Sbjct: 69 KRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFTDFYLVMPFMGTDLGKLMKHEKLGED 128
Query: 285 KLIAIALDIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIACEEVYCDALSDDP 344
++ + + +G+ YIH+ G+IHRDLKP N+ ++++ LKI DFG+A + D+
Sbjct: 129 RIQFLVYQMLKGLRYIHAAGIIHRDLKPGNLAVNEDCELKILDFGLARQ---ADSEMXGX 185
Query: 345 GTYRWM-APEMIKH-KSYGRKVDVYSFGLILWEMVAG 379
RW APE+I + Y + VD++S G I+ EM+ G
Sbjct: 186 VVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITG 222
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 96/227 (42%), Gaps = 32/227 (14%)
Query: 232 EVALLSRLHNPNVIKFVAA-------------CKKPPVYCVITEYLSEGSLRAYLHKLEH 278
EV LL+ L++ V+++ AA KK + EY +L +H E+
Sbjct: 52 EVXLLASLNHQYVVRYYAAWLERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHS-EN 110
Query: 279 KTLPLPKLIAIALDIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIACEEVY-- 336
+ + I + YIHSQG+IHR+LKP N+ ID+ ++KI DFG+A + V+
Sbjct: 111 LNQQRDEYWRLFRQILEALSYIHSQGIIHRNLKPXNIFIDESRNVKIGDFGLA-KNVHRS 169
Query: 337 --------------CDALSDDPGTYRWMAPEMIKHKS-YGRKVDVYSFGLILWEMVAGTI 381
D L+ GT ++A E++ Y K+D YS G+I +E +
Sbjct: 170 LDILKLDSQNLPGSSDNLTSAIGTAXYVATEVLDGTGHYNEKIDXYSLGIIFFEXIYPFS 229
Query: 382 PYEEMNPIQAAFAVVNKNLRPAIPGDCPPAMAALIEQCWSLQPDKRP 428
E I V+ P + +I P+KRP
Sbjct: 230 TGXERVNILKKLRSVSIEFPPDFDDNKXKVEKKIIRLLIDHDPNKRP 276
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 108/224 (48%), Gaps = 11/224 (4%)
Query: 168 VDAADEHTVDLSQLFLGLRFAHGAHSRLYHGIYKD--EPVAVKIIRIPDDDENETLAARL 225
+D AD+ + L GA S + I ++ + AVKI+ + + L+
Sbjct: 13 LDMADDDVLFEDVYELCEVIGKGAFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLST-- 70
Query: 226 EKQFNREVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPK 285
+ RE ++ L +P++++ + + ++ E++ L + K +
Sbjct: 71 -EDLKREASICHMLKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSE 129
Query: 286 LIA--IALDIARGMEYIHSQGVIHRDLKPENVLI---DQEFHLKIADFGIACEEVYCDAL 340
+A I + Y H +IHRD+KPENVL+ + +K+ DFG+A + +
Sbjct: 130 AVASHYMRQILEALRYCHDNNIIHRDVKPENVLLASKENSAPVKLGDFGVAIQLGESGLV 189
Query: 341 SDD-PGTYRWMAPEMIKHKSYGRKVDVYSFGLILWEMVAGTIPY 383
+ GT +MAPE++K + YG+ VDV+ G+IL+ +++G +P+
Sbjct: 190 AGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPF 233
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 99/213 (46%), Gaps = 12/213 (5%)
Query: 224 RLEKQFNREVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPL 283
RLE E+ + L +P ++ A ++ P + E L GSL + E LP
Sbjct: 127 RLEVFRAEELMACAGLTSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLVK--EQGCLPE 184
Query: 284 PKLIAIALDIARGMEYIHSQGVIHRDLKPENVLIDQEF-HLKIADFGIAC----EEVYCD 338
+ + G+EY+HS+ ++H D+K +NVL+ + H + DFG A + +
Sbjct: 185 DRALYYLGQALEGLEYLHSRRILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKS 244
Query: 339 ALSDD--PGTYRWMAPEMIKHKSYGRKVDVYSFGLILWEMVAGTIPYEEM--NPIQAAFA 394
L+ D PGT MAPE++ +S KVDV+S ++ M+ G P+ + P+ A
Sbjct: 245 LLTGDYIPGTETHMAPEVVLGRSCDAKVDVWSSCCMMLHMLNGCHPWTQFFRGPLCLKIA 304
Query: 395 VVNKNLRPAIPGDCPPAMAALIEQCWSLQPDKR 427
+R IP C P A I++ +P R
Sbjct: 305 SEPPPVR-EIPPSCAPLTAQAIQEGLRKEPIHR 336
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 82/158 (51%), Gaps = 8/158 (5%)
Query: 232 EVALLSRL-HNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIA 290
E+ +L R +PN+I V+TE G L + L K + A+
Sbjct: 65 EIEILLRYGQHPNIITLKDVYDDGKYVYVVTELXKGGELLDKI--LRQKFFSEREASAVL 122
Query: 291 LDIARGMEYIHSQGVIHRDLKPENVL-IDQEFH---LKIADFGIACEEVYCDALSDDPG- 345
I + +EY+H+QGV+HRDLKP N+L +D+ + ++I DFG A + + L P
Sbjct: 123 FTITKTVEYLHAQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLXTPCY 182
Query: 346 TYRWMAPEMIKHKSYGRKVDVYSFGLILWEMVAGTIPY 383
T ++APE+++ + Y D++S G++L+ + G P+
Sbjct: 183 TANFVAPEVLERQGYDAACDIWSLGVLLYTXLTGYTPF 220
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 100/200 (50%), Gaps = 7/200 (3%)
Query: 205 VAVKIIRIPDDDENETLAARLEKQFNREVALLSRLHNPNVIKFVAACKKPPVYCVITE-Y 263
VAVK + P +N+T A R RE+ LL +++ N+I + + Y
Sbjct: 50 VAVKKLSRPF--QNQTHAKRA----YRELVLLKCVNHKNIISLLNVFTPQKTLEEFQDVY 103
Query: 264 LSEGSLRAYLHKLEHKTLPLPKLIAIALDIARGMEYIHSQGVIHRDLKPENVLIDQEFHL 323
L + A L ++ H L ++ + + G++++HS G+IHRDLKP N+++ + L
Sbjct: 104 LVMELMDANLCQVIHMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTL 163
Query: 324 KIADFGIACEEVYCDALSDDPGTYRWMAPEMIKHKSYGRKVDVYSFGLILWEMVAGTIPY 383
KI DFG+A ++ T + APE+I Y VD++S G I+ E+V G++ +
Sbjct: 164 KILDFGLARTASTNFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKGSVIF 223
Query: 384 EEMNPIQAAFAVVNKNLRPA 403
+ + I V+ + P+
Sbjct: 224 QGTDHIDQWNKVIEQLGTPS 243
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 99/200 (49%), Gaps = 7/200 (3%)
Query: 205 VAVKIIRIPDDDENETLAARLEKQFNREVALLSRLHNPNVIKFVAACKKPPVYCVITE-Y 263
VAVK + P +N+T A R RE+ LL +++ N+I + + Y
Sbjct: 52 VAVKKLSRPF--QNQTHAKRA----YRELVLLKCVNHKNIISLLNVFTPQKTLEEFQDVY 105
Query: 264 LSEGSLRAYLHKLEHKTLPLPKLIAIALDIARGMEYIHSQGVIHRDLKPENVLIDQEFHL 323
L + A L ++ H L ++ + + G++++HS G+IHRDLKP N+++ + L
Sbjct: 106 LVMELMDANLCQVIHMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTL 165
Query: 324 KIADFGIACEEVYCDALSDDPGTYRWMAPEMIKHKSYGRKVDVYSFGLILWEMVAGTIPY 383
KI DFG+A ++ T + APE+I Y VD++S G I+ E+V G + +
Sbjct: 166 KILDFGLARTACTNFMMTPYVVTRYYRAPEVILGMGYAANVDIWSVGCIMGELVKGCVIF 225
Query: 384 EEMNPIQAAFAVVNKNLRPA 403
+ + I V+ + P+
Sbjct: 226 QGTDHIDQWNKVIEQLGTPS 245
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 106/216 (49%), Gaps = 29/216 (13%)
Query: 187 FAHGAHSRLYHGI--YKDEPVAVKIIRIPDDDENETLAARLEKQFNREVALLSRLH-NPN 243
GA++++ + + AVKII E A + REV L + N N
Sbjct: 21 LGEGAYAKVQGAVSLQNGKEYAVKII--------EKQAGHSRSRVFREVETLYQCQGNKN 72
Query: 244 VIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIALDIARGMEYIHSQ 303
+++ + + + ++ E L GS+ A++ K +H + + D+A ++++H++
Sbjct: 73 ILELIEFFEDDTRFYLVFEKLQGGSILAHIQKQKH--FNEREASRVVRDVAAALDFLHTK 130
Query: 304 GVIHRDLKPENVLIDQEFH---LKIADFGI--------ACEEVYCDALSDDPGTYRWMAP 352
G+ HRDLKPEN+L + +KI DF + +C + L+ G+ +MAP
Sbjct: 131 GIAHRDLKPENILCESPEKVSPVKICDFDLGSGMKLNNSCTPITTPELTTPCGSAEYMAP 190
Query: 353 EMI-----KHKSYGRKVDVYSFGLILWEMVAGTIPY 383
E++ + Y ++ D++S G++L+ M++G P+
Sbjct: 191 EVVEVFTDQATFYDKRCDLWSLGVVLYIMLSGYPPF 226
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 47/193 (24%), Positives = 99/193 (51%), Gaps = 7/193 (3%)
Query: 196 YHGIYKDEPVAVKI-IRIPDDDENETLAARLEKQFNREVALLSRLHNPNVIKFVAACKKP 254
+ G+Y+ E + + + I D+ A + ++ EV + +L +P++++ +
Sbjct: 24 FAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFEDS 83
Query: 255 PVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIA--IALDIARGMEYIHSQGVIHRDLKP 312
++ E G + YL +++ P + A I GM Y+HS G++HRDL
Sbjct: 84 NYVYLVLEMCHNGEMNRYL---KNRVKPFSENEARHFMHQIITGMLYLHSHGILHRDLTL 140
Query: 313 ENVLIDQEFHLKIADFGIACE-EVYCDALSDDPGTYRWMAPEMIKHKSYGRKVDVYSFGL 371
N+L+ + ++KIADFG+A + ++ + GT +++PE+ ++G + DV+S G
Sbjct: 141 SNLLLTRNMNIKIADFGLATQLKMPHEKHYTLCGTPNYISPEIATRSAHGLESDVWSLGC 200
Query: 372 ILWEMVAGTIPYE 384
+ + ++ G P++
Sbjct: 201 MFYTLLIGRPPFD 213
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 108/216 (50%), Gaps = 29/216 (13%)
Query: 187 FAHGAHSRLYHGI--YKDEPVAVKIIRIPDDDENETLAARLEKQFNREVALLSRLH-NPN 243
GAH+R+ I + AVKII E + + REV +L + + N
Sbjct: 21 LGEGAHARVQTCINLITSQEYAVKII--------EKQPGHIRSRVFREVEMLYQCQGHRN 72
Query: 244 VIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIALDIARGMEYIHSQ 303
V++ + ++ + ++ E + GS+ +++HK H + + D+A ++++H++
Sbjct: 73 VLELIEFFEEEDRFYLVFEKMRGGSILSHIHKRRH--FNELEASVVVQDVASALDFLHNK 130
Query: 304 GVIHRDLKPENVLI---DQEFHLKIADFGIA--------CEEVYCDALSDDPGTYRWMAP 352
G+ HRDLKPEN+L +Q +KI DF + C + L G+ +MAP
Sbjct: 131 GIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCSPISTPELLTPCGSAEYMAP 190
Query: 353 EMIKHKS-----YGRKVDVYSFGLILWEMVAGTIPY 383
E+++ S Y ++ D++S G+IL+ +++G P+
Sbjct: 191 EVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPF 226
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 108/234 (46%), Gaps = 25/234 (10%)
Query: 230 NREVALLSRLHNPNVIKFVAACKKPP----VYCVITEYLSEGSLRAYLHKLEHKT--LPL 283
RE + ++PN+++ VA C + ++ + G+L + +L+ K L
Sbjct: 74 QREADMHRLFNHPNILRLVAYCLRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTE 133
Query: 284 PKLIAIALDIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGI---ACEEVYCD-- 338
+++ + L I RG+E IH++G HRDLKP N+L+ E + D G AC V
Sbjct: 134 DQILWLLLGICRGLEAIHAKGYAHRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEGSRQ 193
Query: 339 --ALSDDPG---TYRWMAPEMIKHKSY---GRKVDVYSFGLILWEMVAGTIPYEEM--NP 388
L D T + APE+ +S+ + DV+S G +L+ M+ G PY+ +
Sbjct: 194 ALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKG 253
Query: 389 IQAAFAVVNKNLRPAIPGDCPPAMAALIEQCWSLQPDKRPEFWHIVKVLEQFET 442
A AV N+ P P A+ L+ ++ P +RP HI +L Q E
Sbjct: 254 DSVALAVQNQLSIPQSPRH-SSALWQLLNSMMTVDPHQRP---HIPLLLSQLEA 303
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/164 (31%), Positives = 89/164 (54%), Gaps = 10/164 (6%)
Query: 226 EKQF-NREVALLSRLHNPNVIK-----FVAACKKPPVYC-VITEYLSEGSLRAYLHKLEH 278
+K+F NRE+ ++ +L + N+++ + + KK VY ++ +Y+ E R H
Sbjct: 90 DKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRA 149
Query: 279 K-TLPLPKLIAIALDIARGMEYIHSQGVIHRDLKPENVLIDQEFH-LKIADFGIACEEVY 336
K TLP+ + + R + YIHS G+ HRD+KP+N+L+D + LK+ DFG A + V
Sbjct: 150 KQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVR 209
Query: 337 CDALSDDPGTYRWMAPEMI-KHKSYGRKVDVYSFGLILWEMVAG 379
+ + + APE+I Y +DV+S G +L E++ G
Sbjct: 210 GEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLG 253
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 74/255 (29%), Positives = 115/255 (45%), Gaps = 20/255 (7%)
Query: 186 RFAHGAHSRLYHGIYKDEPVAVKIIRIPDDDENETLAARLEKQFNREVALLSR-LHNPNV 244
R A+G + H + + AVK IR T+ ++ +K+ ++ + R + P
Sbjct: 44 RGAYGVVEKXRH-VPSGQIXAVKRIR-------ATVNSQEQKRLLXDLDISXRTVDCPFT 95
Query: 245 IKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHK--TLPLPKLIAIALDIARGMEYIHS 302
+ F A + + E L + SL + ++ K T+P L IA+ I + +E++HS
Sbjct: 96 VTFYGALFREGDVWICXE-LXDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHS 154
Query: 303 Q-GVIHRDLKPENVLIDQEFHLKIADFGIACEEVYCDALSDDPGTYRWMAPEMI----KH 357
+ VIHRD+KP NVLI+ +K DFGI+ V A D G + APE I
Sbjct: 155 KLSVIHRDVKPSNVLINALGQVKXCDFGISGYLVDDVAKDIDAGCKPYXAPERINPELNQ 214
Query: 358 KSYGRKVDVYSFGLILWEMVAGTIPYEEM-NPIQAAFAVVNKNLRPAIPGDCPPA-MAAL 415
K Y K D++S G+ E+ PY+ P Q VV + P +P D A
Sbjct: 215 KGYSVKSDIWSLGITXIELAILRFPYDSWGTPFQQLKQVVEEP-SPQLPADKFSAEFVDF 273
Query: 416 IEQCWSLQPDKRPEF 430
QC +RP +
Sbjct: 274 TSQCLKKNSKERPTY 288
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 102/214 (47%), Gaps = 11/214 (5%)
Query: 232 EVALLSRLHNPNVIKFVAAC--KKPPVYCVITEYLSEGSLRAYLHK--LEHKTLPLPKLI 287
EV LL L +PN++++ + ++ EY G L + + K E + L ++
Sbjct: 55 EVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVL 114
Query: 288 AIALDIARGMEYIHSQG-----VIHRDLKPENVLIDQEFHLKIADFGIACEEVYCDALSD 342
+ + ++ H + V+HRDLKP NV +D + ++K+ DFG+A + + +
Sbjct: 115 RVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDEDFAK 174
Query: 343 D-PGTYRWMAPEMIKHKSYGRKVDVYSFGLILWEMVAGTIPYEEMNPIQAAFAVVNKNLR 401
+ GT +M+PE + SY K D++S G +L+E+ A P+ + + A + R
Sbjct: 175 EFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGKFR 234
Query: 402 PAIPGDCPPAMAALIEQCWSLQPDKRPEFWHIVK 435
IP + +I + +L+ RP I++
Sbjct: 235 -RIPYRYSDELNEIITRMLNLKDYHRPSVEEILE 267
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 80/160 (50%), Gaps = 16/160 (10%)
Query: 289 IALDIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIAC----EEVYCDALSDDP 344
I + IA +E++HS+G++HRDLKP N+ + +K+ DFG+ +E L+ P
Sbjct: 169 IFIQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMP 228
Query: 345 ---------GTYRWMAPEMIKHKSYGRKVDVYSFGLILWEMVAGTIPYEEMNPIQAAFAV 395
GT +M+PE I +Y KVD++S GLIL+E++ +M ++ V
Sbjct: 229 AYATHXGQVGTKLYMSPEQIHGNNYSHKVDIFSLGLILFELLYSF--STQMERVRIITDV 286
Query: 396 VNKNLRPAIPGDCPPAMAALIEQCWSLQPDKRPEFWHIVK 435
N P + P +++ S P +RPE I++
Sbjct: 287 RNLKF-PLLFTQKYPQEHMMVQDMLSPSPTERPEATDIIE 325
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 52/164 (31%), Positives = 89/164 (54%), Gaps = 10/164 (6%)
Query: 226 EKQF-NREVALLSRLHNPNVIK-----FVAACKKPPVYC-VITEYLSEGSLRAYLHKLEH 278
+K+F NRE+ ++ +L + N+++ + + KK VY ++ +Y+ E R H
Sbjct: 68 DKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRA 127
Query: 279 K-TLPLPKLIAIALDIARGMEYIHSQGVIHRDLKPENVLIDQEFH-LKIADFGIACEEVY 336
K TLP+ + + R + YIHS G+ HRD+KP+N+L+D + LK+ DFG A + V
Sbjct: 128 KQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVR 187
Query: 337 CDALSDDPGTYRWMAPEMI-KHKSYGRKVDVYSFGLILWEMVAG 379
+ + + APE+I Y +DV+S G +L E++ G
Sbjct: 188 GEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLG 231
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 100/215 (46%), Gaps = 12/215 (5%)
Query: 202 DEPVAVKIIRIPDDDENETLAARLEKQFNREVALLSRLHNPNVIKFVAACKKPPVYCVIT 261
D VA+K + P +N+T A R RE+ L+ +++ N+I +
Sbjct: 49 DRNVAIKKLSRPF--QNQTHAKRA----YRELVLMKXVNHKNIISLLNVFTPQKTLEEFQ 102
Query: 262 E-YLSEGSLRAYLHKLEHKTLPLPKLIAIALDIARGMEYIHSQGVIHRDLKPENVLIDQE 320
+ YL + A L ++ L ++ + + G++++HS G+IHRDLKP N+++ +
Sbjct: 103 DVYLVMELMDANLXQVIQMELDHERMSYLLYQMLXGIKHLHSAGIIHRDLKPSNIVVKSD 162
Query: 321 FHLKIADFGIACEEVYCDALSDDPGTYRWMAPEMIKHKSYGRKVDVYSFGLILWEMVAGT 380
LKI DFG+A ++ T + APE+I Y VD++S G I+ EMV
Sbjct: 163 XTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 222
Query: 381 IPYEEMNPIQAAFAVVNKNLRPAIPGDCPPAMAAL 415
I + + I V+ + P CP M L
Sbjct: 223 ILFPGRDYIDQWNKVIEQLGTP-----CPEFMKKL 252
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 52/164 (31%), Positives = 89/164 (54%), Gaps = 10/164 (6%)
Query: 226 EKQF-NREVALLSRLHNPNVIK-----FVAACKKPPVYC-VITEYLSEGSLRAYLHKLEH 278
+K+F NRE+ ++ +L + N+++ + + KK VY ++ +Y+ E R H
Sbjct: 68 DKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRA 127
Query: 279 K-TLPLPKLIAIALDIARGMEYIHSQGVIHRDLKPENVLIDQEFH-LKIADFGIACEEVY 336
K TLP+ + + R + YIHS G+ HRD+KP+N+L+D + LK+ DFG A + V
Sbjct: 128 KQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVR 187
Query: 337 CDALSDDPGTYRWMAPEMI-KHKSYGRKVDVYSFGLILWEMVAG 379
+ + + APE+I Y +DV+S G +L E++ G
Sbjct: 188 GEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLG 231
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 52/164 (31%), Positives = 89/164 (54%), Gaps = 10/164 (6%)
Query: 226 EKQF-NREVALLSRLHNPNVIK-----FVAACKKPPVYC-VITEYLSEGSLRAYLHKLEH 278
+K+F NRE+ ++ +L + N+++ + + KK VY ++ +Y+ E R H
Sbjct: 64 DKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRA 123
Query: 279 K-TLPLPKLIAIALDIARGMEYIHSQGVIHRDLKPENVLIDQEFH-LKIADFGIACEEVY 336
K TLP+ + + R + YIHS G+ HRD+KP+N+L+D + LK+ DFG A + V
Sbjct: 124 KQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVR 183
Query: 337 CDALSDDPGTYRWMAPEMI-KHKSYGRKVDVYSFGLILWEMVAG 379
+ + + APE+I Y +DV+S G +L E++ G
Sbjct: 184 GEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLG 227
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 87/188 (46%), Gaps = 18/188 (9%)
Query: 202 DEPVAVKIIRIPDDDENETLAARLEKQFNREVALLSRLH-NPNVIKFVAACKKPPVYCVI 260
++ AVKII + R+E +E+ L +PN++K ++
Sbjct: 36 NQAFAVKII-----------SKRMEANTQKEITALKLCEGHPNIVKLHEVFHDQLHTFLV 84
Query: 261 TEYLSEGSLRAYLHKLEHKTLPLPKLIAIALDIARGMEYIHSQGVIHRDLKPENVLIDQE 320
E L+ G L + K +H + I + + ++H GV+HRDLKPEN+L E
Sbjct: 85 MELLNGGELFERIKKKKH--FSETEASYIMRKLVSAVSHMHDVGVVHRDLKPENLLFTDE 142
Query: 321 ---FHLKIADFGIA-CEEVYCDALSDDPGTYRWMAPEMIKHKSYGRKVDVYSFGLILWEM 376
+KI DFG A + L T + APE++ Y D++S G+IL+ M
Sbjct: 143 NDNLEIKIIDFGFARLKPPDNQPLKTPCFTLHYAAPELLNQNGYDESCDLWSLGVILYTM 202
Query: 377 VAGTIPYE 384
++G +P++
Sbjct: 203 LSGQVPFQ 210
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 52/164 (31%), Positives = 89/164 (54%), Gaps = 10/164 (6%)
Query: 226 EKQF-NREVALLSRLHNPNVIK-----FVAACKKPPVYC-VITEYLSEGSLRAYLHKLEH 278
+K+F NRE+ ++ +L + N+++ + + KK VY ++ +Y+ E R H
Sbjct: 75 DKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRA 134
Query: 279 K-TLPLPKLIAIALDIARGMEYIHSQGVIHRDLKPENVLIDQEFH-LKIADFGIACEEVY 336
K TLP+ + + R + YIHS G+ HRD+KP+N+L+D + LK+ DFG A + V
Sbjct: 135 KQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVR 194
Query: 337 CDALSDDPGTYRWMAPEMI-KHKSYGRKVDVYSFGLILWEMVAG 379
+ + + APE+I Y +DV+S G +L E++ G
Sbjct: 195 GEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLG 238
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 49/152 (32%), Positives = 82/152 (53%), Gaps = 5/152 (3%)
Query: 231 REVALLSRLHNPNVIKFVAACKKPPVYCVITE-YLSEGSLRAYLHKL-EHKTLPLPKLIA 288
RE+ LL L + NVI + +E YL + A L+ + + + L +
Sbjct: 76 RELRLLKHLKHENVIGLLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKSQALSDEHVQF 135
Query: 289 IALDIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIACEEVYCDALSDDPGTYR 348
+ + RG++YIHS G+IHRDLKP NV ++++ L+I DFG+A + + ++ T
Sbjct: 136 LVYQLLRGLKYIHSAGIIHRDLKPSNVAVNEDSELRILDFGLARQA--DEEMTGYVATRW 193
Query: 349 WMAPE-MIKHKSYGRKVDVYSFGLILWEMVAG 379
+ APE M+ Y + VD++S G I+ E++ G
Sbjct: 194 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLQG 225
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 52/164 (31%), Positives = 89/164 (54%), Gaps = 10/164 (6%)
Query: 226 EKQF-NREVALLSRLHNPNVIK-----FVAACKKPPVYC-VITEYLSEGSLRAYLHKLEH 278
+K+F NRE+ ++ +L + N+++ + + KK VY ++ +Y+ E R H
Sbjct: 84 DKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRA 143
Query: 279 K-TLPLPKLIAIALDIARGMEYIHSQGVIHRDLKPENVLIDQEFH-LKIADFGIACEEVY 336
K TLP+ + + R + YIHS G+ HRD+KP+N+L+D + LK+ DFG A + V
Sbjct: 144 KQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVR 203
Query: 337 CDALSDDPGTYRWMAPEMI-KHKSYGRKVDVYSFGLILWEMVAG 379
+ + + APE+I Y +DV+S G +L E++ G
Sbjct: 204 GEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLG 247
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 52/164 (31%), Positives = 89/164 (54%), Gaps = 10/164 (6%)
Query: 226 EKQF-NREVALLSRLHNPNVIK-----FVAACKKPPVYC-VITEYLSEGSLRAYLHKLEH 278
+K+F NRE+ ++ +L + N+++ + + KK VY ++ +Y+ E R H
Sbjct: 90 DKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRA 149
Query: 279 K-TLPLPKLIAIALDIARGMEYIHSQGVIHRDLKPENVLIDQEFH-LKIADFGIACEEVY 336
K TLP+ + + R + YIHS G+ HRD+KP+N+L+D + LK+ DFG A + V
Sbjct: 150 KQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVR 209
Query: 337 CDALSDDPGTYRWMAPEMI-KHKSYGRKVDVYSFGLILWEMVAG 379
+ + + APE+I Y +DV+S G +L E++ G
Sbjct: 210 GEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLG 253
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 52/164 (31%), Positives = 89/164 (54%), Gaps = 10/164 (6%)
Query: 226 EKQF-NREVALLSRLHNPNVIK-----FVAACKKPPVYC-VITEYLSEGSLRAYLHKLEH 278
+K+F NRE+ ++ +L + N+++ + + KK VY ++ +Y+ E R H
Sbjct: 94 DKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRA 153
Query: 279 K-TLPLPKLIAIALDIARGMEYIHSQGVIHRDLKPENVLIDQEFH-LKIADFGIACEEVY 336
K TLP+ + + R + YIHS G+ HRD+KP+N+L+D + LK+ DFG A + V
Sbjct: 154 KQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVR 213
Query: 337 CDALSDDPGTYRWMAPEMI-KHKSYGRKVDVYSFGLILWEMVAG 379
+ + + APE+I Y +DV+S G +L E++ G
Sbjct: 214 GEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLG 257
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 52/164 (31%), Positives = 89/164 (54%), Gaps = 10/164 (6%)
Query: 226 EKQF-NREVALLSRLHNPNVIK-----FVAACKKPPVYC-VITEYLSEGSLRAYLHKLEH 278
+K+F NRE+ ++ +L + N+++ + + KK VY ++ +Y+ E R H
Sbjct: 135 DKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRA 194
Query: 279 K-TLPLPKLIAIALDIARGMEYIHSQGVIHRDLKPENVLIDQEFH-LKIADFGIACEEVY 336
K TLP+ + + R + YIHS G+ HRD+KP+N+L+D + LK+ DFG A + V
Sbjct: 195 KQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVR 254
Query: 337 CDALSDDPGTYRWMAPEMI-KHKSYGRKVDVYSFGLILWEMVAG 379
+ + + APE+I Y +DV+S G +L E++ G
Sbjct: 255 GEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLG 298
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 101/220 (45%), Gaps = 23/220 (10%)
Query: 232 EVALLSRLHNPNVIKFVAAC--KKPPVYCVITEYLSEGSLRAYLHK--LEHKTLPLPKLI 287
EV LL L +PN++++ + ++ EY G L + + K E + L ++
Sbjct: 55 EVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVL 114
Query: 288 AIALDIARGMEYIHSQG-----VIHRDLKPENVLIDQEFHLKIADFGIACEEVYCDALSD 342
+ + ++ H + V+HRDLKP NV +D + ++K+ DFG+A L+
Sbjct: 115 RVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLA------RILNH 168
Query: 343 DP-------GTYRWMAPEMIKHKSYGRKVDVYSFGLILWEMVAGTIPYEEMNPIQAAFAV 395
D GT +M+PE + SY K D++S G +L+E+ A P+ + + A +
Sbjct: 169 DTSFAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKI 228
Query: 396 VNKNLRPAIPGDCPPAMAALIEQCWSLQPDKRPEFWHIVK 435
R IP + +I + +L+ RP I++
Sbjct: 229 REGKFR-RIPYRYSDELNEIITRMLNLKDYHRPSVEEILE 267
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 62/235 (26%), Positives = 109/235 (46%), Gaps = 25/235 (10%)
Query: 188 AHGAHSRLYHGIYKDEPVAVKIIRIPDDDENETLAARLEKQFNREVALLSRLHNPNVIKF 247
A G Y I + VA+K + P +N+T A R RE+ L+ +++ N+I
Sbjct: 36 AQGIVCAAYDAIL-ERNVAIKKLSRPF--QNQTHAKRA----YRELVLMKCVNHKNIIGL 88
Query: 248 VAACKKPP-------VYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIALDIARGMEYI 300
+ VY ++ E + + +L+H+ ++ + + G++++
Sbjct: 89 LNVFTPQKSLEEFQDVY-IVMELMDANLCQVIQMELDHE-----RMSYLLYQMLCGIKHL 142
Query: 301 HSQGVIHRDLKPENVLIDQEFHLKIADFGIACEEVYCDALSDDPGTYRWMAPEMIKHKSY 360
HS G+IHRDLKP N+++ + LKI DFG+A ++ + T + APE+I Y
Sbjct: 143 HSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPEVVTRYYRAPEVILGMGY 202
Query: 361 GRKVDVYSFGLILWEMVAGTIPYEEMNPIQAAFAVVNKNLRPAIPGDCPPAMAAL 415
VD++S G I+ EM+ G + + + I V+ + P CP M L
Sbjct: 203 KENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTP-----CPEFMKKL 252
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 52/164 (31%), Positives = 89/164 (54%), Gaps = 10/164 (6%)
Query: 226 EKQF-NREVALLSRLHNPNVIK-----FVAACKKPPVYC-VITEYLSEGSLRAYLHKLEH 278
+K+F NRE+ ++ +L + N+++ + + KK VY ++ +Y+ E R H
Sbjct: 92 DKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRA 151
Query: 279 K-TLPLPKLIAIALDIARGMEYIHSQGVIHRDLKPENVLIDQEFH-LKIADFGIACEEVY 336
K TLP+ + + R + YIHS G+ HRD+KP+N+L+D + LK+ DFG A + V
Sbjct: 152 KQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVR 211
Query: 337 CDALSDDPGTYRWMAPEMI-KHKSYGRKVDVYSFGLILWEMVAG 379
+ + + APE+I Y +DV+S G +L E++ G
Sbjct: 212 GEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLG 255
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 101/217 (46%), Gaps = 17/217 (7%)
Query: 232 EVALLSRLHNPNVIKFVAAC--KKPPVYCVITEYLSEGSLRAYLHK--LEHKTLPLPKLI 287
EV LL L +PN++++ + ++ EY G L + + K E + L ++
Sbjct: 55 EVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVL 114
Query: 288 AIALDIARGMEYIHSQG-----VIHRDLKPENVLIDQEFHLKIADFGIAC----EEVYCD 338
+ + ++ H + V+HRDLKP NV +D + ++K+ DFG+A + +
Sbjct: 115 RVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAK 174
Query: 339 ALSDDPGTYRWMAPEMIKHKSYGRKVDVYSFGLILWEMVAGTIPYEEMNPIQAAFAVVNK 398
A GT +M+PE + SY K D++S G +L+E+ A P+ + + A +
Sbjct: 175 AFV---GTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREG 231
Query: 399 NLRPAIPGDCPPAMAALIEQCWSLQPDKRPEFWHIVK 435
R IP + +I + +L+ RP I++
Sbjct: 232 KFR-RIPYRYSDELNEIITRMLNLKDYHRPSVEEILE 267
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 52/164 (31%), Positives = 89/164 (54%), Gaps = 10/164 (6%)
Query: 226 EKQF-NREVALLSRLHNPNVIK-----FVAACKKPPVYC-VITEYLSEGSLRAYLHKLEH 278
+K+F NRE+ ++ +L + N+++ + + KK VY ++ +Y+ E R H
Sbjct: 56 DKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRA 115
Query: 279 K-TLPLPKLIAIALDIARGMEYIHSQGVIHRDLKPENVLIDQEFH-LKIADFGIACEEVY 336
K TLP+ + + R + YIHS G+ HRD+KP+N+L+D + LK+ DFG A + V
Sbjct: 116 KQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVR 175
Query: 337 CDALSDDPGTYRWMAPEMI-KHKSYGRKVDVYSFGLILWEMVAG 379
+ + + APE+I Y +DV+S G +L E++ G
Sbjct: 176 GEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLG 219
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 52/164 (31%), Positives = 89/164 (54%), Gaps = 10/164 (6%)
Query: 226 EKQF-NREVALLSRLHNPNVIK-----FVAACKKPPVYC-VITEYLSEGSLRAYLHKLEH 278
+K+F NRE+ ++ +L + N+++ + + KK VY ++ +Y+ E R H
Sbjct: 60 DKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRA 119
Query: 279 K-TLPLPKLIAIALDIARGMEYIHSQGVIHRDLKPENVLIDQEFH-LKIADFGIACEEVY 336
K TLP+ + + R + YIHS G+ HRD+KP+N+L+D + LK+ DFG A + V
Sbjct: 120 KQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVR 179
Query: 337 CDALSDDPGTYRWMAPEMI-KHKSYGRKVDVYSFGLILWEMVAG 379
+ + + APE+I Y +DV+S G +L E++ G
Sbjct: 180 GEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLG 223
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 52/164 (31%), Positives = 89/164 (54%), Gaps = 10/164 (6%)
Query: 226 EKQF-NREVALLSRLHNPNVIK-----FVAACKKPPVYC-VITEYLSEGSLRAYLHKLEH 278
+K+F NRE+ ++ +L + N+++ + + KK VY ++ +Y+ E R H
Sbjct: 56 DKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRA 115
Query: 279 K-TLPLPKLIAIALDIARGMEYIHSQGVIHRDLKPENVLIDQEFH-LKIADFGIACEEVY 336
K TLP+ + + R + YIHS G+ HRD+KP+N+L+D + LK+ DFG A + V
Sbjct: 116 KQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVR 175
Query: 337 CDALSDDPGTYRWMAPEMI-KHKSYGRKVDVYSFGLILWEMVAG 379
+ + + APE+I Y +DV+S G +L E++ G
Sbjct: 176 GEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLG 219
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 96/194 (49%), Gaps = 8/194 (4%)
Query: 240 HNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIALDIARGMEY 299
+P ++ A + +I +Y++ G L +L + E T ++ +I +E+
Sbjct: 117 QSPFLVTLHYAFQTETKLHLILDYINGGELFTHLSQRERFTEHEVQIYVG--EIVLALEH 174
Query: 300 IHSQGVIHRDLKPENVLIDQEFHLKIADFGIACEEVY--CDALSDDPGTYRWMAPEMIKH 357
+H G+I+RD+K EN+L+D H+ + DFG++ E V + D GT +MAP++++
Sbjct: 175 LHKLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETERAYDFCGTIEYMAPDIVRG 234
Query: 358 KSYG--RKVDVYSFGLILWEMVAGTIPYEEMNPIQAAFAVVNKNLR--PAIPGDCPPAMA 413
G + VD +S G++++E++ G P+ + + + L+ P P +
Sbjct: 235 GDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRILKSEPPYPQEMSALAK 294
Query: 414 ALIEQCWSLQPDKR 427
LI++ P KR
Sbjct: 295 DLIQRLLMKDPKKR 308
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 52/164 (31%), Positives = 89/164 (54%), Gaps = 10/164 (6%)
Query: 226 EKQF-NREVALLSRLHNPNVIK-----FVAACKKPPVYC-VITEYLSEGSLRAYLHKLEH 278
+K+F NRE+ ++ +L + N+++ + + KK VY ++ +Y+ E R H
Sbjct: 57 DKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRA 116
Query: 279 K-TLPLPKLIAIALDIARGMEYIHSQGVIHRDLKPENVLIDQEFH-LKIADFGIACEEVY 336
K TLP+ + + R + YIHS G+ HRD+KP+N+L+D + LK+ DFG A + V
Sbjct: 117 KQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVR 176
Query: 337 CDALSDDPGTYRWMAPEMI-KHKSYGRKVDVYSFGLILWEMVAG 379
+ + + APE+I Y +DV+S G +L E++ G
Sbjct: 177 GEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLG 220
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 52/164 (31%), Positives = 89/164 (54%), Gaps = 10/164 (6%)
Query: 226 EKQF-NREVALLSRLHNPNVIK-----FVAACKKPPVYC-VITEYLSEGSLRAYLHKLEH 278
+K+F NRE+ ++ +L + N+++ + + KK VY ++ +Y+ E R H
Sbjct: 61 DKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRA 120
Query: 279 K-TLPLPKLIAIALDIARGMEYIHSQGVIHRDLKPENVLIDQEFH-LKIADFGIACEEVY 336
K TLP+ + + R + YIHS G+ HRD+KP+N+L+D + LK+ DFG A + V
Sbjct: 121 KQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVR 180
Query: 337 CDALSDDPGTYRWMAPEMI-KHKSYGRKVDVYSFGLILWEMVAG 379
+ + + APE+I Y +DV+S G +L E++ G
Sbjct: 181 GEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLG 224
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 100/215 (46%), Gaps = 12/215 (5%)
Query: 202 DEPVAVKIIRIPDDDENETLAARLEKQFNREVALLSRLHNPNVIKFVAACKKPPVYCVIT 261
D VA+K + P +N+T A R RE+ L+ +++ N+I +
Sbjct: 49 DRNVAIKKLSRPF--QNQTHAKRAY----RELVLMKXVNHKNIISLLNVFTPQKTLEEFQ 102
Query: 262 E-YLSEGSLRAYLHKLEHKTLPLPKLIAIALDIARGMEYIHSQGVIHRDLKPENVLIDQE 320
+ YL + A L ++ L ++ + + G++++HS G+IHRDLKP N+++ +
Sbjct: 103 DVYLVMELMDANLXQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSD 162
Query: 321 FHLKIADFGIACEEVYCDALSDDPGTYRWMAPEMIKHKSYGRKVDVYSFGLILWEMVAGT 380
LKI DFG+A ++ T + APE+I Y VD++S G I+ EMV
Sbjct: 163 XTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 222
Query: 381 IPYEEMNPIQAAFAVVNKNLRPAIPGDCPPAMAAL 415
I + + I V+ + P CP M L
Sbjct: 223 ILFPGRDYIDQWNKVIEQLGTP-----CPEFMKKL 252
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 52/164 (31%), Positives = 90/164 (54%), Gaps = 10/164 (6%)
Query: 226 EKQF-NREVALLSRLHNPNVIK-----FVAACKKPPVYC-VITEYLSEGSLRAYLHKLEH 278
+K+F NRE+ ++ +L + N+++ + + KK VY ++ +Y+ E R H
Sbjct: 56 DKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDVVYLNLVLDYVPETVYRVARHYSRA 115
Query: 279 K-TLPLPKLIAIALDIARGMEYIHSQGVIHRDLKPENVLIDQEFH-LKIADFGIACEEVY 336
K TLP+ + + R + YIHS G+ HRD+KP+N+L+D + LK+ DFG A + V
Sbjct: 116 KQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVR 175
Query: 337 CDALSDDPGTYRWMAPEMIKHKS-YGRKVDVYSFGLILWEMVAG 379
+ + + APE+I + Y +DV+S G +L E++ G
Sbjct: 176 GEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLG 219
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 73/299 (24%), Positives = 132/299 (44%), Gaps = 49/299 (16%)
Query: 186 RFAHGAHSRLYHGIYKDEPVAVKIIRIPDDDENETLAARLEKQFNREVALLSRLHN---- 241
+ GA+ ++ I + V + +I D +N T A R RE+ +L+ L
Sbjct: 16 KLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTF----REIMILTELSGHENI 71
Query: 242 PNVIKFVAACKKPPVYCVITEYLS---EGSLRAYLHKLEHKTLPLPKLIAIALDIARGME 298
N++ + A VY V +Y+ +RA + + HK + +LI + ++
Sbjct: 72 VNLLNVLRADNDRDVYLVF-DYMETDLHAVIRANILEPVHKQYVVYQLIKV-------IK 123
Query: 299 YIHSQGVIHRDLKPENVLIDQEFHLKIADFGIA-------------------CEEVYCD- 338
Y+HS G++HRD+KP N+L++ E H+K+ADFG++ E + D
Sbjct: 124 YLHSGGLLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINENTENFDDD 183
Query: 339 --ALSDDPGTYRWMAPE-MIKHKSYGRKVDVYSFGLILWEMVAGTIPY---EEMNPIQAA 392
L+D T + APE ++ Y + +D++S G IL E++ G + MN ++
Sbjct: 184 QPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSSTMNQLERI 243
Query: 393 FAVV----NKNLRPAIPGDCPPAMAALIEQCWSLQPDKRPEFWHIVKVLEQFETSLACN 447
V+ N+++ + +L E+ Q +KR F +L + CN
Sbjct: 244 IGVIDFPSNEDVESIQSPFAKTMIESLKEKVEIRQSNKRDIFTKWKNLLLKINPKADCN 302
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 52/164 (31%), Positives = 89/164 (54%), Gaps = 10/164 (6%)
Query: 226 EKQF-NREVALLSRLHNPNVIK-----FVAACKKPPVYC-VITEYLSEGSLRAYLHKLEH 278
+K+F NRE+ ++ +L + N+++ + + KK VY ++ +Y+ E R H
Sbjct: 69 DKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRA 128
Query: 279 K-TLPLPKLIAIALDIARGMEYIHSQGVIHRDLKPENVLIDQEFH-LKIADFGIACEEVY 336
K TLP+ + + R + YIHS G+ HRD+KP+N+L+D + LK+ DFG A + V
Sbjct: 129 KQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVR 188
Query: 337 CDALSDDPGTYRWMAPEMI-KHKSYGRKVDVYSFGLILWEMVAG 379
+ + + APE+I Y +DV+S G +L E++ G
Sbjct: 189 GEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLG 232
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 65/265 (24%), Positives = 124/265 (46%), Gaps = 15/265 (5%)
Query: 201 KDEPVAVKIIRIPDDDENETLAARLEKQFNREVALLSRLHNPNVIKFVAACKKPPVYCVI 260
K++ V VK I+ E+ + + E+A+LSR+ + N+IK + + + ++
Sbjct: 48 KNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFENQGFFQLV 107
Query: 261 TEYLSEG-SLRAYLHKLEHKTLPLPKLIAIALDIARGMEYIHSQGVIHRDLKPENVLIDQ 319
E G L A++ + H L P I + + Y+ + +IHRD+K EN++I +
Sbjct: 108 MEKHGSGLDLFAFIDR--HPRLDEPLASYIFRQLVSAVGYLRLKDIIHRDIKDENIVIAE 165
Query: 320 EFHLKIADFGIACEEVYCDALSDDPGTYRWMAPEMIKHKSY-GRKVDVYSFGLILWEMVA 378
+F +K+ DFG A GT + APE++ Y G +++++S G+ L+ +V
Sbjct: 166 DFTIKLIDFGSAAYLERGKLFYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVF 225
Query: 379 GTIPYEEM-NPIQAAF---AVVNKNLRPAIPGDCPPA------MAALIEQCWSLQPDKRP 428
P+ E+ ++AA +V+K L + G P + L+ W QP
Sbjct: 226 EENPFCELEETVEAAIHPPYLVSKELMSLVSGLLQPVPERRTTLEKLVTDPWVTQPVNLA 285
Query: 429 EF-WHIVKVLEQFETSLACNGTLNL 452
++ W V + + E+ + +L +
Sbjct: 286 DYTWEEVFRVNKPESGVLSAASLEM 310
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 100/215 (46%), Gaps = 12/215 (5%)
Query: 202 DEPVAVKIIRIPDDDENETLAARLEKQFNREVALLSRLHNPNVIKFVAACKKPPVYCVIT 261
D VA+K + P +N+T A R RE+ L+ +++ N+I +
Sbjct: 42 DRNVAIKKLSRPF--QNQTHAKRA----YRELVLMKCVNHKNIISLLNVFTPQKTLEEFQ 95
Query: 262 E-YLSEGSLRAYLHKLEHKTLPLPKLIAIALDIARGMEYIHSQGVIHRDLKPENVLIDQE 320
+ YL + A L ++ L ++ + + G++++HS G+IHRDLKP N+++ +
Sbjct: 96 DVYLVMELMDANLXQVIQMELDHERMSYLLYQMLXGIKHLHSAGIIHRDLKPSNIVVKSD 155
Query: 321 FHLKIADFGIACEEVYCDALSDDPGTYRWMAPEMIKHKSYGRKVDVYSFGLILWEMVAGT 380
LKI DFG+A ++ T + APE+I Y VD++S G I+ EMV
Sbjct: 156 XTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 215
Query: 381 IPYEEMNPIQAAFAVVNKNLRPAIPGDCPPAMAAL 415
I + + I V+ + P CP M L
Sbjct: 216 ILFPGRDYIDQWNKVIEQLGTP-----CPEFMKKL 245
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 52/164 (31%), Positives = 89/164 (54%), Gaps = 10/164 (6%)
Query: 226 EKQF-NREVALLSRLHNPNVIK-----FVAACKKPPVYC-VITEYLSEGSLRAYLHKLEH 278
+K+F NRE+ ++ +L + N+++ + + KK VY ++ +Y+ E R H
Sbjct: 56 DKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRA 115
Query: 279 K-TLPLPKLIAIALDIARGMEYIHSQGVIHRDLKPENVLIDQEFH-LKIADFGIACEEVY 336
K TLP+ + + R + YIHS G+ HRD+KP+N+L+D + LK+ DFG A + V
Sbjct: 116 KQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVR 175
Query: 337 CDALSDDPGTYRWMAPEMI-KHKSYGRKVDVYSFGLILWEMVAG 379
+ + + APE+I Y +DV+S G +L E++ G
Sbjct: 176 GEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLG 219
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 100/215 (46%), Gaps = 12/215 (5%)
Query: 202 DEPVAVKIIRIPDDDENETLAARLEKQFNREVALLSRLHNPNVIKFVAACKKPPVYCVIT 261
D VA+K + P +N+T A R RE+ L+ +++ N+I +
Sbjct: 49 DRNVAIKKLSRPF--QNQTHAKRA----YRELVLMKCVNHKNIISLLNVFTPQKTLEEFQ 102
Query: 262 E-YLSEGSLRAYLHKLEHKTLPLPKLIAIALDIARGMEYIHSQGVIHRDLKPENVLIDQE 320
+ YL + A L ++ L ++ + + G++++HS G+IHRDLKP N+++ +
Sbjct: 103 DVYLVMELMDANLXQVIQMELDHERMSYLLYQMLXGIKHLHSAGIIHRDLKPSNIVVKSD 162
Query: 321 FHLKIADFGIACEEVYCDALSDDPGTYRWMAPEMIKHKSYGRKVDVYSFGLILWEMVAGT 380
LKI DFG+A ++ T + APE+I Y VD++S G I+ EMV
Sbjct: 163 XTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 222
Query: 381 IPYEEMNPIQAAFAVVNKNLRPAIPGDCPPAMAAL 415
I + + I V+ + P CP M L
Sbjct: 223 ILFPGRDYIDQWNKVIEQLGTP-----CPEFMKKL 252
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 49/152 (32%), Positives = 82/152 (53%), Gaps = 5/152 (3%)
Query: 231 REVALLSRLHNPNVIKFVAACKKPPVYCVITE-YLSEGSLRAYLHKL-EHKTLPLPKLIA 288
RE+ LL L + NVI + +E YL + A L+ + + + L +
Sbjct: 76 RELRLLKHLKHENVIGLLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKCQALSDEHVQF 135
Query: 289 IALDIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIACEEVYCDALSDDPGTYR 348
+ + RG++YIHS G+IHRDLKP NV ++++ L+I DFG+A + + ++ T
Sbjct: 136 LVYQLLRGLKYIHSAGIIHRDLKPSNVAVNEDSELRILDFGLARQA--DEEMTGYVATRW 193
Query: 349 WMAPE-MIKHKSYGRKVDVYSFGLILWEMVAG 379
+ APE M+ Y + VD++S G I+ E++ G
Sbjct: 194 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLQG 225
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 100/215 (46%), Gaps = 12/215 (5%)
Query: 202 DEPVAVKIIRIPDDDENETLAARLEKQFNREVALLSRLHNPNVIKFVAACKKPPVYCVIT 261
D VA+K + P +N+T A R RE+ L+ +++ N+I +
Sbjct: 49 DRNVAIKKLSRPF--QNQTHAKRAY----RELVLMKXVNHKNIISLLNVFTPQKTLEEFQ 102
Query: 262 E-YLSEGSLRAYLHKLEHKTLPLPKLIAIALDIARGMEYIHSQGVIHRDLKPENVLIDQE 320
+ YL + A L ++ L ++ + + G++++HS G+IHRDLKP N+++ +
Sbjct: 103 DVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSD 162
Query: 321 FHLKIADFGIACEEVYCDALSDDPGTYRWMAPEMIKHKSYGRKVDVYSFGLILWEMVAGT 380
LKI DFG+A ++ T + APE+I Y VD++S G I+ EMV
Sbjct: 163 XTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 222
Query: 381 IPYEEMNPIQAAFAVVNKNLRPAIPGDCPPAMAAL 415
I + + I V+ + P CP M L
Sbjct: 223 ILFPGRDYIDQWNKVIEQLGTP-----CPEFMKKL 252
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 49/152 (32%), Positives = 82/152 (53%), Gaps = 5/152 (3%)
Query: 231 REVALLSRLHNPNVIKFVAACKKPPVYCVITE-YLSEGSLRAYLHKL-EHKTLPLPKLIA 288
RE+ LL L + NVI + +E YL + A L+ + + + L +
Sbjct: 68 RELRLLKHLKHENVIGLLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKCQALSDEHVQF 127
Query: 289 IALDIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIACEEVYCDALSDDPGTYR 348
+ + RG++YIHS G+IHRDLKP NV ++++ L+I DFG+A + + ++ T
Sbjct: 128 LVYQLLRGLKYIHSAGIIHRDLKPSNVAVNEDCELRILDFGLARQA--DEEMTGYVATRW 185
Query: 349 WMAPE-MIKHKSYGRKVDVYSFGLILWEMVAG 379
+ APE M+ Y + VD++S G I+ E++ G
Sbjct: 186 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLQG 217
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 107/224 (47%), Gaps = 14/224 (6%)
Query: 166 NAVDAADEHTVDLSQLFLGLRFAHGAHS--RLYHGIYKDEPVAVKIIRIPDDDENETLAA 223
+ VD E+ S L GA S R + + A KII + L+A
Sbjct: 9 SGVDLGTENLYFQSMYQLFEELGKGAFSVVRRCVKVLAGQEYAAKIIN------TKKLSA 62
Query: 224 RLEKQFNREVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPL 283
R ++ RE + L +PN+++ + + + +I + ++ G L + E+ +
Sbjct: 63 RDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEAD 122
Query: 284 PKLIAIALDIARGMEYIHSQGVIHRDLKPENVLIDQEFH---LKIADFGIACE-EVYCDA 339
I + + H GV+HRDLKPEN+L+ + +K+ADFG+A E E A
Sbjct: 123 AS--HCIQQILEAVLHCHQMGVVHRDLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQA 180
Query: 340 LSDDPGTYRWMAPEMIKHKSYGRKVDVYSFGLILWEMVAGTIPY 383
GT +++PE+++ YG+ VD+++ G+IL+ ++ G P+
Sbjct: 181 WFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPF 224
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 91/178 (51%), Gaps = 7/178 (3%)
Query: 202 DEPVAVKIIRIPDDDENETLAARLEKQFNREVALLSRLHNPNVIKFVAACKKPPVYCVIT 261
++ VA+K I++ E + + + RE+ LL L +PN+I + A ++
Sbjct: 35 NQIVAIKKIKLGHRSEAKD---GINRTALREIKLLQELSHPNIIGLLDAFGHKSNISLVF 91
Query: 262 EYLSEGSLRAYLHKLEHKTLPLPKLIAIALDIARGMEYIHSQGVIHRDLKPENVLIDQEF 321
+++ E L + K L + A L +G+EY+H ++HRDLKP N+L+D+
Sbjct: 92 DFM-ETDLEVII-KDNSLVLTPSHIKAYMLMTLQGLEYLHQHWILHRDLKPNNLLLDENG 149
Query: 322 HLKIADFGIACEEVYCDALSDDPGTYRWM-APEMI-KHKSYGRKVDVYSFGLILWEMV 377
LK+ADFG+A + RW APE++ + YG VD+++ G IL E++
Sbjct: 150 VLKLADFGLAKSFGSPNRAYXHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELL 207
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 86/159 (54%), Gaps = 9/159 (5%)
Query: 230 NREVALLSRLHNPNVIK-----FVAACKKPPVYC-VITEYLSEGSLRAYLHKLEHK-TLP 282
NRE+ ++ +L + N+++ + + KK VY ++ +Y+ E R H K TLP
Sbjct: 61 NRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLP 120
Query: 283 LPKLIAIALDIARGMEYIHSQGVIHRDLKPENVLIDQEFH-LKIADFGIACEEVYCDALS 341
+ + + R + YIHS G+ HRD+KP+N+L+D + LK+ DFG A + V +
Sbjct: 121 VIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV 180
Query: 342 DDPGTYRWMAPEMIKHKS-YGRKVDVYSFGLILWEMVAG 379
+ + APE+I + Y +DV+S G +L E++ G
Sbjct: 181 SYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLG 219
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 96/201 (47%), Gaps = 12/201 (5%)
Query: 186 RFAHGAHSRLYHGIYKD--EPVAVKIIRIPDDDENETLAARLEKQFNREVALLSRLHNPN 243
+ G + ++ ++ E VA+K +R+ DDDE +A RE+ LL L + N
Sbjct: 9 KIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSAL------REICLLKELKHKN 62
Query: 244 VIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIALDIARGMEYIHSQ 303
+++ ++ E+ + L+ Y P + + + +G+ + HS+
Sbjct: 63 IVRLHDVLHSDKKLTLVFEFCDQ-DLKKYFDSCNGDLDP-EIVKSFLFQLLKGLGFCHSR 120
Query: 304 GVIHRDLKPENVLIDQEFHLKIADFGIA-CEEVYCDALSDDPGTYRWMAPEMI-KHKSYG 361
V+HRDLKP+N+LI++ LK+ADFG+A + S + T + P+++ K Y
Sbjct: 121 NVLHRDLKPQNLLINRNGELKLADFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLYS 180
Query: 362 RKVDVYSFGLILWEMVAGTIP 382
+D++S G I E+ P
Sbjct: 181 TSIDMWSAGCIFAELANAARP 201
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/260 (25%), Positives = 120/260 (46%), Gaps = 18/260 (6%)
Query: 176 VDLSQLFLGLRFAHGAHSRLYHGIYKD--EPVAVKIIRIPDDDENETLAARLEKQFNREV 233
D QLF L GA S + + K + A KII + L+AR ++ RE
Sbjct: 30 TDDYQLFEEL--GKGAFSVVRRCVKKTPTQEYAAKII------NTKKLSARDHQKLEREA 81
Query: 234 ALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIALDI 293
+ L +PN+++ + + + ++ + ++ G L + E+ + I
Sbjct: 82 RICRLLKHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADAS--HCIHQI 139
Query: 294 ARGMEYIHSQGVIHRDLKPENVLIDQEFH---LKIADFGIACE-EVYCDALSDDPGTYRW 349
+ +IH ++HRDLKPEN+L+ + +K+ADFG+A E + A GT +
Sbjct: 140 LESVNHIHQHDIVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGEQQAWFGFAGTPGY 199
Query: 350 MAPEMIKHKSYGRKVDVYSFGLILWEMVAGTIPY--EEMNPIQAAFAVVNKNLRPAIPGD 407
++PE+++ YG+ VD+++ G+IL+ ++ G P+ E+ + + +
Sbjct: 200 LSPEVLRKDPYGKPVDIWACGVILYILLVGYPPFWDEDQHKLYQQIKAGAYDFPSPEWDT 259
Query: 408 CPPAMAALIEQCWSLQPDKR 427
P LI Q ++ P KR
Sbjct: 260 VTPEAKNLINQMLTINPAKR 279
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 86/159 (54%), Gaps = 9/159 (5%)
Query: 230 NREVALLSRLHNPNVIK-----FVAACKKPPVYC-VITEYLSEGSLRAYLHKLEHK-TLP 282
NRE+ ++ +L + N+++ + + KK VY ++ +Y+ E R H K TLP
Sbjct: 61 NRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLP 120
Query: 283 LPKLIAIALDIARGMEYIHSQGVIHRDLKPENVLIDQEFH-LKIADFGIACEEVYCDALS 341
+ + + R + YIHS G+ HRD+KP+N+L+D + LK+ DFG A + V +
Sbjct: 121 VIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV 180
Query: 342 DDPGTYRWMAPEMIKHKS-YGRKVDVYSFGLILWEMVAG 379
+ + APE+I + Y +DV+S G +L E++ G
Sbjct: 181 SYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLG 219
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 91/180 (50%), Gaps = 7/180 (3%)
Query: 205 VAVKIIRIPDDDENETLAARLEKQFNREVALLSRLHNPNVIKFVAACKKPPVYCVITE-Y 263
VA+K + P +N+T A R RE+ L+ +++ N+I + + Y
Sbjct: 52 VAIKKLSRPF--QNQTHAKRA----YRELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVY 105
Query: 264 LSEGSLRAYLHKLEHKTLPLPKLIAIALDIARGMEYIHSQGVIHRDLKPENVLIDQEFHL 323
+ + A L ++ L ++ + + G++++HS G+IHRDLKP N+++ + L
Sbjct: 106 IVMELMDANLSQVIQMELDHERMSYLLYQMLVGIKHLHSAGIIHRDLKPSNIVVKSDATL 165
Query: 324 KIADFGIACEEVYCDALSDDPGTYRWMAPEMIKHKSYGRKVDVYSFGLILWEMVAGTIPY 383
KI DFG+A ++ T + APE+I Y VD++S G+I+ EM+ G + +
Sbjct: 166 KILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGVIMGEMIKGGVLF 225
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 82/163 (50%), Gaps = 6/163 (3%)
Query: 226 EKQFNREVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPK 285
+ E+A+L ++ + N++ + Y ++ + +S G L + LE
Sbjct: 50 DSSLENEIAVLKKIKHENIVTLEDIYESTTHYYLVMQLVSGGEL--FDRILERGVYTEKD 107
Query: 286 LIAIALDIARGMEYIHSQGVIHRDLKPENVLI---DQEFHLKIADFGIACEEVYCDALSD 342
+ + ++Y+H G++HRDLKPEN+L ++ + I DFG++ E +S
Sbjct: 108 ASLVIQQVLSAVKYLHENGIVHRDLKPENLLYLTPEENSKIMITDFGLSKME-QNGIMST 166
Query: 343 DPGTYRWMAPEMIKHKSYGRKVDVYSFGLILWEMVAGTIPYEE 385
GT ++APE++ K Y + VD +S G+I + ++ G P+ E
Sbjct: 167 ACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYE 209
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 91/180 (50%), Gaps = 7/180 (3%)
Query: 205 VAVKIIRIPDDDENETLAARLEKQFNREVALLSRLHNPNVIKFVAACKKPPVYCVITE-Y 263
VA+K + P +N+T A R RE+ L+ +++ N+I + + Y
Sbjct: 52 VAIKKLSRPF--QNQTHAKRA----YRELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVY 105
Query: 264 LSEGSLRAYLHKLEHKTLPLPKLIAIALDIARGMEYIHSQGVIHRDLKPENVLIDQEFHL 323
+ + A L ++ L ++ + + G++++HS G+IHRDLKP N+++ + L
Sbjct: 106 IVMELMDANLSQVIQMELDHERMSYLLYQMLVGIKHLHSAGIIHRDLKPSNIVVKSDATL 165
Query: 324 KIADFGIACEEVYCDALSDDPGTYRWMAPEMIKHKSYGRKVDVYSFGLILWEMVAGTIPY 383
KI DFG+A ++ T + APE+I Y VD++S G+I+ EM+ G + +
Sbjct: 166 KILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGVIMGEMIKGGVLF 225
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 47/144 (32%), Positives = 78/144 (54%), Gaps = 11/144 (7%)
Query: 293 IARGMEYIHSQGVIHRDLKPENVLID-QEFHLKIADFGIACEEVYCDALSDDPGTYRWMA 351
+ +++ HS+GV+HRD+K EN+LID + K+ DFG + ++ + +D GT +
Sbjct: 148 VVAAIQHCHSRGVVHRDIKDENILIDLRRGCAKLIDFG-SGALLHDEPYTDFDGTRVYSP 206
Query: 352 PEMI-KHKSYGRKVDVYSFGLILWEMVAGTIPYEEMNPIQAAFAVVNKNLRPAIPGDCPP 410
PE I +H+ + V+S G++L++MV G IP+E I A ++ P DC
Sbjct: 207 PEWISRHQYHALPATVWSLGILLYDMVCGDIPFERDQEILEAELHFPAHVSP----DC-- 260
Query: 411 AMAALIEQCWSLQPDKRPEFWHIV 434
ALI +C + +P RP I+
Sbjct: 261 --CALIRRCLAPKPSSRPSLEEIL 282
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/235 (26%), Positives = 109/235 (46%), Gaps = 25/235 (10%)
Query: 188 AHGAHSRLYHGIYKDEPVAVKIIRIPDDDENETLAARLEKQFNREVALLSRLHNPNVIKF 247
A G Y I + VA+K + P +N+T A R RE+ L+ +++ N+I
Sbjct: 37 AQGIVCAAYDAIL-ERNVAIKKLSRPF--QNQTHAKRA----YRELVLMKCVNHKNIIGL 89
Query: 248 VAAC-------KKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIALDIARGMEYI 300
+ + VY ++ E + + +L+H+ ++ + + G++++
Sbjct: 90 LNVFTPQKSLEEFQDVY-IVMELMDANLCQVIQMELDHE-----RMSYLLYQMLCGIKHL 143
Query: 301 HSQGVIHRDLKPENVLIDQEFHLKIADFGIACEEVYCDALSDDPGTYRWMAPEMIKHKSY 360
HS G+IHRDLKP N+++ + LKI DFG+A ++ T + APE+I Y
Sbjct: 144 HSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGY 203
Query: 361 GRKVDVYSFGLILWEMVAGTIPYEEMNPIQAAFAVVNKNLRPAIPGDCPPAMAAL 415
VD++S G I+ EM+ G + + + I V+ + P CP M L
Sbjct: 204 KENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTP-----CPEFMKKL 253
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/235 (26%), Positives = 109/235 (46%), Gaps = 25/235 (10%)
Query: 188 AHGAHSRLYHGIYKDEPVAVKIIRIPDDDENETLAARLEKQFNREVALLSRLHNPNVIKF 247
A G Y I + VA+K + P +N+T A R RE+ L+ +++ N+I
Sbjct: 36 AQGIVCAAYDAIL-ERNVAIKKLSRPF--QNQTHAKRA----YRELVLMKCVNHKNIIGL 88
Query: 248 VAAC-------KKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIALDIARGMEYI 300
+ + VY ++ E + + +L+H+ ++ + + G++++
Sbjct: 89 LNVFTPQKSLEEFQDVY-IVMELMDANLCQVIQMELDHE-----RMSYLLYQMLCGIKHL 142
Query: 301 HSQGVIHRDLKPENVLIDQEFHLKIADFGIACEEVYCDALSDDPGTYRWMAPEMIKHKSY 360
HS G+IHRDLKP N+++ + LKI DFG+A ++ T + APE+I Y
Sbjct: 143 HSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGY 202
Query: 361 GRKVDVYSFGLILWEMVAGTIPYEEMNPIQAAFAVVNKNLRPAIPGDCPPAMAAL 415
VD++S G I+ EM+ G + + + I V+ + P CP M L
Sbjct: 203 KENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTP-----CPEFMKKL 252
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 98/191 (51%), Gaps = 15/191 (7%)
Query: 205 VAVKIIRIPDDDE-------NETLAARLEKQFNREVALLSRLHNPNVIKFVAACKKPPVY 257
V + ++IP E + L+AR ++ RE + L +PN+++ + + +
Sbjct: 19 VVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGFH 78
Query: 258 CVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIALDIARGMEYIHSQGVIHRDLKPENVLI 317
++ + ++ G L + E+ + I + + H G++HRDLKPEN+L+
Sbjct: 79 YLVFDLVTGGELFEDIVAREYYSEA--DASHCIQQILESVNHCHLNGIVHRDLKPENLLL 136
Query: 318 DQEFH---LKIADFGIACEEVYCD--ALSDDPGTYRWMAPEMIKHKSYGRKVDVYSFGLI 372
+ +K+ADFG+A E V D A GT +++PE+++ YG+ VD+++ G+I
Sbjct: 137 ASKSKGAAVKLADFGLAIE-VQGDQQAWFGFAGTPGYLSPEVLRKDPYGKPVDMWACGVI 195
Query: 373 LWEMVAGTIPY 383
L+ ++ G P+
Sbjct: 196 LYILLVGYPPF 206
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 55/88 (62%), Gaps = 3/88 (3%)
Query: 293 IARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIACEEVYCDALSDDPGTYRWMAP 352
I RG++YIHS +IHRDLKP N+ ++++ LKI DFG+A D ++ T + AP
Sbjct: 141 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHT--ADEMTGYVATRWYRAP 198
Query: 353 E-MIKHKSYGRKVDVYSFGLILWEMVAG 379
E M+ Y + VD++S G I+ E++ G
Sbjct: 199 EIMLNWMHYNQTVDIWSVGCIMAELLTG 226
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 93/179 (51%), Gaps = 10/179 (5%)
Query: 211 RIPDDDENETLAARLEKQF-NREVALLSRLHNPNVIKFVA-----ACKKPPVYC-VITEY 263
++ + DE +K+F NRE+ ++ + +PNV+ A KK V+ ++ EY
Sbjct: 60 KLVESDEVAIKKVLQDKRFKNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFLNLVLEY 119
Query: 264 LSEGSLRAYLHKLEHK-TLPLPKLIAIALDIARGMEYIHSQGVIHRDLKPENVLIDQEFH 322
+ E RA H + K T+P+ + + R + YIHS G+ HRD+KP+N+L+D
Sbjct: 120 VPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHSIGICHRDIKPQNLLLDPPSG 179
Query: 323 -LKIADFGIACEEVYCDALSDDPGTYRWMAPEMI-KHKSYGRKVDVYSFGLILWEMVAG 379
LK+ DFG A + + + + APE+I +Y +D++S G ++ E++ G
Sbjct: 180 VLKLIDFGSAKILIAGEPNVSXICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQG 238
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 55/88 (62%), Gaps = 3/88 (3%)
Query: 293 IARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIACEEVYCDALSDDPGTYRWMAP 352
I RG++YIHS +IHRDLKP N+ ++++ LKI DFG+A D ++ T + AP
Sbjct: 141 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHT--ADEMTGYVATRWYRAP 198
Query: 353 E-MIKHKSYGRKVDVYSFGLILWEMVAG 379
E M+ Y + VD++S G I+ E++ G
Sbjct: 199 EIMLNWMHYNQTVDIWSVGCIMAELLTG 226
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/229 (27%), Positives = 104/229 (45%), Gaps = 13/229 (5%)
Query: 188 AHGAHSRLYHGIYKDEPVAVKIIRIPDDDENETLAARLEKQFNREVALLSRLHNPNVIKF 247
A G Y + D VA+K + P +N+T A R RE+ L+ +++ N+I
Sbjct: 74 AQGIVCAAYDAVL-DRNVAIKKLSRPF--QNQTHAKRAY----RELVLMKCVNHKNIISL 126
Query: 248 VAACKKPPVYCVITE-YLSEGSLRAYLHKLEHKTLPLPKLIAIALDIARGMEYIHSQGVI 306
+ + YL + A L ++ L ++ + + G++++HS G+I
Sbjct: 127 LNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGII 186
Query: 307 HRDLKPENVLIDQEFHLKIADFGIACEEVYCDALSDDPGTYRWMAPEMIKHKSYGRKVDV 366
HRDLKP N+++ + LKI DFG+A ++ T + APE+I Y VD+
Sbjct: 187 HRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDI 246
Query: 367 YSFGLILWEMVAGTIPYEEMNPIQAAFAVVNKNLRPAIPGDCPPAMAAL 415
+S G I+ EMV I + + I V+ + P CP M L
Sbjct: 247 WSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTP-----CPEFMKKL 290
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 55/88 (62%), Gaps = 3/88 (3%)
Query: 293 IARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIACEEVYCDALSDDPGTYRWMAP 352
I RG++YIHS +IHRDLKP N+ ++++ LKI DFG+A D ++ T + AP
Sbjct: 141 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHT--ADEMTGYVATRWYRAP 198
Query: 353 E-MIKHKSYGRKVDVYSFGLILWEMVAG 379
E M+ Y + VD++S G I+ E++ G
Sbjct: 199 EIMLNWMHYNQTVDIWSVGCIMAELLTG 226
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/183 (30%), Positives = 92/183 (50%), Gaps = 17/183 (9%)
Query: 207 VKIIRIPDDDENETLAARLEKQFNREVALLSRLHNPNVIKFVAACKKPPVYCVI-TEYLS 265
V I +IP+ + T A K+ RE+ +L + N+I + Y + Y+
Sbjct: 82 VAIKKIPNAFDVVTNA----KRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFKSVYVV 137
Query: 266 EGSLRAYLHKLEHKTLPLP--KLIAIALDIARGMEYIHSQGVIHRDLKPENVLIDQEFHL 323
+ + LH++ H + PL + + RG++Y+HS VIHRDLKP N+L+++ L
Sbjct: 138 LDLMESDLHQIIHSSQPLTLEHVRYFLYQLLRGLKYMHSAQVIHRDLKPSNLLVNENCEL 197
Query: 324 KIADFGIA-------CEEVYCDALSDDPGTYRWMAPE-MIKHKSYGRKVDVYSFGLILWE 375
KI DFG+A E Y +++ T + APE M+ Y + +D++S G I E
Sbjct: 198 KIGDFGMARGLCTSPAEHQYF--MTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGE 255
Query: 376 MVA 378
M+A
Sbjct: 256 MLA 258
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/229 (27%), Positives = 104/229 (45%), Gaps = 13/229 (5%)
Query: 188 AHGAHSRLYHGIYKDEPVAVKIIRIPDDDENETLAARLEKQFNREVALLSRLHNPNVIKF 247
A G Y + D VA+K + P +N+T A R RE+ L+ +++ N+I
Sbjct: 35 AQGIVCAAYDAVL-DRNVAIKKLSRPF--QNQTHAKRA----YRELVLMKCVNHKNIISL 87
Query: 248 VAACKKPPVYCVITE-YLSEGSLRAYLHKLEHKTLPLPKLIAIALDIARGMEYIHSQGVI 306
+ + YL + A L ++ L ++ + + G++++HS G+I
Sbjct: 88 LNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGII 147
Query: 307 HRDLKPENVLIDQEFHLKIADFGIACEEVYCDALSDDPGTYRWMAPEMIKHKSYGRKVDV 366
HRDLKP N+++ + LKI DFG+A ++ T + APE+I Y VD+
Sbjct: 148 HRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDI 207
Query: 367 YSFGLILWEMVAGTIPYEEMNPIQAAFAVVNKNLRPAIPGDCPPAMAAL 415
+S G I+ EMV I + + I V+ + P CP M L
Sbjct: 208 WSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTP-----CPEFMKKL 251
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 100/215 (46%), Gaps = 12/215 (5%)
Query: 202 DEPVAVKIIRIPDDDENETLAARLEKQFNREVALLSRLHNPNVIKFVAACKKPPVYCVIT 261
D VA+K + P +N+T A R RE+ L+ +++ N+I +
Sbjct: 87 DRNVAIKKLSRPF--QNQTHAKRAY----RELVLMKCVNHKNIISLLNVFTPQKTLEEFQ 140
Query: 262 E-YLSEGSLRAYLHKLEHKTLPLPKLIAIALDIARGMEYIHSQGVIHRDLKPENVLIDQE 320
+ YL + A L ++ L ++ + + G++++HS G+IHRDLKP N+++ +
Sbjct: 141 DVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSD 200
Query: 321 FHLKIADFGIACEEVYCDALSDDPGTYRWMAPEMIKHKSYGRKVDVYSFGLILWEMVAGT 380
LKI DFG+A ++ T + APE+I Y VD++S G I+ EMV
Sbjct: 201 CTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 260
Query: 381 IPYEEMNPIQAAFAVVNKNLRPAIPGDCPPAMAAL 415
I + + I V+ + P CP M L
Sbjct: 261 ILFPGRDYIDQWNKVIEQLGTP-----CPEFMKKL 290
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/229 (27%), Positives = 104/229 (45%), Gaps = 13/229 (5%)
Query: 188 AHGAHSRLYHGIYKDEPVAVKIIRIPDDDENETLAARLEKQFNREVALLSRLHNPNVIKF 247
A G Y + D VA+K + P +N+T A R RE+ L+ +++ N+I
Sbjct: 37 AQGIVCAAYDAVL-DRNVAIKKLSRPF--QNQTHAKRA----YRELVLMKCVNHKNIISL 89
Query: 248 VAACKKPPVYCVITE-YLSEGSLRAYLHKLEHKTLPLPKLIAIALDIARGMEYIHSQGVI 306
+ + YL + A L ++ L ++ + + G++++HS G+I
Sbjct: 90 LNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGII 149
Query: 307 HRDLKPENVLIDQEFHLKIADFGIACEEVYCDALSDDPGTYRWMAPEMIKHKSYGRKVDV 366
HRDLKP N+++ + LKI DFG+A ++ T + APE+I Y VD+
Sbjct: 150 HRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDI 209
Query: 367 YSFGLILWEMVAGTIPYEEMNPIQAAFAVVNKNLRPAIPGDCPPAMAAL 415
+S G I+ EMV I + + I V+ + P CP M L
Sbjct: 210 WSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTP-----CPEFMKKL 253
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/183 (30%), Positives = 92/183 (50%), Gaps = 17/183 (9%)
Query: 207 VKIIRIPDDDENETLAARLEKQFNREVALLSRLHNPNVIKFVAACKKPPVYCVI-TEYLS 265
V I +IP+ + T A K+ RE+ +L + N+I + Y + Y+
Sbjct: 83 VAIKKIPNAFDVVTNA----KRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFKSVYVV 138
Query: 266 EGSLRAYLHKLEHKTLPLP--KLIAIALDIARGMEYIHSQGVIHRDLKPENVLIDQEFHL 323
+ + LH++ H + PL + + RG++Y+HS VIHRDLKP N+L+++ L
Sbjct: 139 LDLMESDLHQIIHSSQPLTLEHVRYFLYQLLRGLKYMHSAQVIHRDLKPSNLLVNENCEL 198
Query: 324 KIADFGIA-------CEEVYCDALSDDPGTYRWMAPE-MIKHKSYGRKVDVYSFGLILWE 375
KI DFG+A E Y +++ T + APE M+ Y + +D++S G I E
Sbjct: 199 KIGDFGMARGLCTSPAEHQYF--MTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGE 256
Query: 376 MVA 378
M+A
Sbjct: 257 MLA 259
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/229 (27%), Positives = 104/229 (45%), Gaps = 13/229 (5%)
Query: 188 AHGAHSRLYHGIYKDEPVAVKIIRIPDDDENETLAARLEKQFNREVALLSRLHNPNVIKF 247
A G Y + D VA+K + P +N+T A R RE+ L+ +++ N+I
Sbjct: 36 AQGIVCAAYDAVL-DRNVAIKKLSRPF--QNQTHAKRA----YRELVLMKCVNHKNIISL 88
Query: 248 VAACKKPPVYCVITE-YLSEGSLRAYLHKLEHKTLPLPKLIAIALDIARGMEYIHSQGVI 306
+ + YL + A L ++ L ++ + + G++++HS G+I
Sbjct: 89 LNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGII 148
Query: 307 HRDLKPENVLIDQEFHLKIADFGIACEEVYCDALSDDPGTYRWMAPEMIKHKSYGRKVDV 366
HRDLKP N+++ + LKI DFG+A ++ T + APE+I Y VD+
Sbjct: 149 HRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDI 208
Query: 367 YSFGLILWEMVAGTIPYEEMNPIQAAFAVVNKNLRPAIPGDCPPAMAAL 415
+S G I+ EMV I + + I V+ + P CP M L
Sbjct: 209 WSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTP-----CPEFMKKL 252
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 98/191 (51%), Gaps = 15/191 (7%)
Query: 205 VAVKIIRIPDDDE-------NETLAARLEKQFNREVALLSRLHNPNVIKFVAACKKPPVY 257
V + ++IP E + L+AR ++ RE + L +PN+++ + + +
Sbjct: 19 VVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGFH 78
Query: 258 CVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIALDIARGMEYIHSQGVIHRDLKPENVLI 317
++ + ++ G L + E+ + I + + H G++HRDLKPEN+L+
Sbjct: 79 YLVFDLVTGGELFEDIVAREYYSEADAS--HCIQQILESVNHCHLNGIVHRDLKPENLLL 136
Query: 318 DQEFH---LKIADFGIACEEVYCD--ALSDDPGTYRWMAPEMIKHKSYGRKVDVYSFGLI 372
+ +K+ADFG+A E V D A GT +++PE+++ YG+ VD+++ G+I
Sbjct: 137 ASKSKGAAVKLADFGLAIE-VQGDQQAWFGFAGTPGYLSPEVLRKDPYGKPVDMWACGVI 195
Query: 373 LWEMVAGTIPY 383
L+ ++ G P+
Sbjct: 196 LYILLVGYPPF 206
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 55/88 (62%), Gaps = 3/88 (3%)
Query: 293 IARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIACEEVYCDALSDDPGTYRWMAP 352
I RG++YIHS +IHRDLKP N+ ++++ LKI DFG+A D ++ T + AP
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHT--DDEMTGXVATRWYRAP 191
Query: 353 E-MIKHKSYGRKVDVYSFGLILWEMVAG 379
E M+ Y + VD++S G I+ E++ G
Sbjct: 192 EIMLNWMHYNQTVDIWSVGCIMAELLTG 219
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 63/229 (27%), Positives = 104/229 (45%), Gaps = 13/229 (5%)
Query: 188 AHGAHSRLYHGIYKDEPVAVKIIRIPDDDENETLAARLEKQFNREVALLSRLHNPNVIKF 247
A G Y + D VA+K + P +N+T A R RE+ L+ +++ N+I
Sbjct: 36 AQGIVCAAYDAVL-DRNVAIKKLSRPF--QNQTHAKRA----YRELVLMKCVNHKNIISL 88
Query: 248 VAACKKPPVYCVITE-YLSEGSLRAYLHKLEHKTLPLPKLIAIALDIARGMEYIHSQGVI 306
+ + YL + A L ++ L ++ + + G++++HS G+I
Sbjct: 89 LNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGII 148
Query: 307 HRDLKPENVLIDQEFHLKIADFGIACEEVYCDALSDDPGTYRWMAPEMIKHKSYGRKVDV 366
HRDLKP N+++ + LKI DFG+A ++ T + APE+I Y VD+
Sbjct: 149 HRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDI 208
Query: 367 YSFGLILWEMVAGTIPYEEMNPIQAAFAVVNKNLRPAIPGDCPPAMAAL 415
+S G I+ EMV I + + I V+ + P CP M L
Sbjct: 209 WSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTP-----CPEFMKKL 252
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 63/229 (27%), Positives = 104/229 (45%), Gaps = 13/229 (5%)
Query: 188 AHGAHSRLYHGIYKDEPVAVKIIRIPDDDENETLAARLEKQFNREVALLSRLHNPNVIKF 247
A G Y + D VA+K + P +N+T A R RE+ L+ +++ N+I
Sbjct: 37 AQGIVCAAYDAVL-DRNVAIKKLSRPF--QNQTHAKRA----YRELVLMKCVNHKNIISL 89
Query: 248 VAACKKPPVYCVITE-YLSEGSLRAYLHKLEHKTLPLPKLIAIALDIARGMEYIHSQGVI 306
+ + YL + A L ++ L ++ + + G++++HS G+I
Sbjct: 90 LNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGII 149
Query: 307 HRDLKPENVLIDQEFHLKIADFGIACEEVYCDALSDDPGTYRWMAPEMIKHKSYGRKVDV 366
HRDLKP N+++ + LKI DFG+A ++ T + APE+I Y VD+
Sbjct: 150 HRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDI 209
Query: 367 YSFGLILWEMVAGTIPYEEMNPIQAAFAVVNKNLRPAIPGDCPPAMAAL 415
+S G I+ EMV I + + I V+ + P CP M L
Sbjct: 210 WSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTP-----CPEFMKKL 253
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 90/180 (50%), Gaps = 7/180 (3%)
Query: 205 VAVKIIRIPDDDENETLAARLEKQFNREVALLSRLHNPNVIKFVAACKKPPVYCVITE-Y 263
VA+K + P +N+T A R RE+ L+ +++ N+I + + Y
Sbjct: 52 VAIKKLSRPF--QNQTHAKRA----YRELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVY 105
Query: 264 LSEGSLRAYLHKLEHKTLPLPKLIAIALDIARGMEYIHSQGVIHRDLKPENVLIDQEFHL 323
+ + A L ++ L ++ + + G++++HS G+IHRDLKP N+++ + L
Sbjct: 106 IVMELMDANLSQVIQMELDHERMSYLLYQMLVGIKHLHSAGIIHRDLKPSNIVVKSDATL 165
Query: 324 KIADFGIACEEVYCDALSDDPGTYRWMAPEMIKHKSYGRKVDVYSFGLILWEMVAGTIPY 383
KI DFG+A ++ T + APE+I Y VD++S G I+ EM+ G + +
Sbjct: 166 KILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLF 225
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 100/215 (46%), Gaps = 12/215 (5%)
Query: 202 DEPVAVKIIRIPDDDENETLAARLEKQFNREVALLSRLHNPNVIKFVAACKKPPVYCVIT 261
D VA+K + P +N+T A R RE+ L+ +++ N+I +
Sbjct: 42 DRNVAIKKLSRPF--QNQTHAKRA----YRELVLMKCVNHKNIISLLNVFTPQKTLEEFQ 95
Query: 262 E-YLSEGSLRAYLHKLEHKTLPLPKLIAIALDIARGMEYIHSQGVIHRDLKPENVLIDQE 320
+ YL + A L ++ L ++ + + G++++HS G+IHRDLKP N+++ +
Sbjct: 96 DVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSD 155
Query: 321 FHLKIADFGIACEEVYCDALSDDPGTYRWMAPEMIKHKSYGRKVDVYSFGLILWEMVAGT 380
LKI DFG+A ++ T + APE+I Y VD++S G I+ EMV
Sbjct: 156 CTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 215
Query: 381 IPYEEMNPIQAAFAVVNKNLRPAIPGDCPPAMAAL 415
I + + I V+ + P CP M L
Sbjct: 216 ILFPGRDYIDQWNKVIEQLGTP-----CPEFMKKL 245
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 63/229 (27%), Positives = 104/229 (45%), Gaps = 13/229 (5%)
Query: 188 AHGAHSRLYHGIYKDEPVAVKIIRIPDDDENETLAARLEKQFNREVALLSRLHNPNVIKF 247
A G Y + D VA+K + P +N+T A R RE+ L+ +++ N+I
Sbjct: 30 AQGIVCAAYDAVL-DRNVAIKKLSRPF--QNQTHAKRA----YRELVLMKCVNHKNIISL 82
Query: 248 VAACKKPPVYCVITE-YLSEGSLRAYLHKLEHKTLPLPKLIAIALDIARGMEYIHSQGVI 306
+ + YL + A L ++ L ++ + + G++++HS G+I
Sbjct: 83 LNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGII 142
Query: 307 HRDLKPENVLIDQEFHLKIADFGIACEEVYCDALSDDPGTYRWMAPEMIKHKSYGRKVDV 366
HRDLKP N+++ + LKI DFG+A ++ T + APE+I Y VD+
Sbjct: 143 HRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDI 202
Query: 367 YSFGLILWEMVAGTIPYEEMNPIQAAFAVVNKNLRPAIPGDCPPAMAAL 415
+S G I+ EMV I + + I V+ + P CP M L
Sbjct: 203 WSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTP-----CPEFMKKL 246
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/189 (29%), Positives = 91/189 (48%), Gaps = 25/189 (13%)
Query: 205 VAVKIIRIPDDDENETLAARLEKQFNREVALLSRLHNPNVIKFVAACKKPPVYCVITEYL 264
VA+K + P +N+T A R RE+ L+ +++ N+I + V T
Sbjct: 52 VAIKKLSRPF--QNQTHAKRA----YRELVLMKVVNHKNIIGLLN---------VFTPQK 96
Query: 265 SEGSLRAYLHKLEHKTLPLPKLIAIALDIAR----------GMEYIHSQGVIHRDLKPEN 314
S + +E L ++I + LD R G++++HS G+IHRDLKP N
Sbjct: 97 SLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSN 156
Query: 315 VLIDQEFHLKIADFGIACEEVYCDALSDDPGTYRWMAPEMIKHKSYGRKVDVYSFGLILW 374
+++ + LKI DFG+A ++ T + APE+I Y VD++S G I+
Sbjct: 157 IVVKSDATLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMG 216
Query: 375 EMVAGTIPY 383
EM+ G + +
Sbjct: 217 EMIKGGVLF 225
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 85/159 (53%), Gaps = 9/159 (5%)
Query: 230 NREVALLSRLHNPNVIK-----FVAACKKPPVYC-VITEYLSEGSLRAYLHKLEHK-TLP 282
NRE+ ++ +L + N+++ + + KK VY ++ +Y+ R H K TLP
Sbjct: 61 NRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPATVYRVARHYSRAKQTLP 120
Query: 283 LPKLIAIALDIARGMEYIHSQGVIHRDLKPENVLIDQEFH-LKIADFGIACEEVYCDALS 341
+ + + R + YIHS G+ HRD+KP+N+L+D + LK+ DFG A + V +
Sbjct: 121 VIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV 180
Query: 342 DDPGTYRWMAPEMIKHKS-YGRKVDVYSFGLILWEMVAG 379
+ + APE+I + Y +DV+S G +L E++ G
Sbjct: 181 SXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLG 219
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/235 (26%), Positives = 108/235 (45%), Gaps = 25/235 (10%)
Query: 188 AHGAHSRLYHGIYKDEPVAVKIIRIPDDDENETLAARLEKQFNREVALLSRLHNPNVIKF 247
A G Y I + VA+K + P +N+T A R RE+ L+ +++ N+I
Sbjct: 38 AQGIVCAAYDAIL-ERNVAIKKLSRPF--QNQTHAKRA----YRELVLMKCVNHKNIIGL 90
Query: 248 VAAC-------KKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIALDIARGMEYI 300
+ + VY ++ E + + +L+H+ ++ + + G++++
Sbjct: 91 LNVFTPQKSLEEFQDVY-IVMELMDANLCQVIQMELDHE-----RMSYLLYQMLCGIKHL 144
Query: 301 HSQGVIHRDLKPENVLIDQEFHLKIADFGIACEEVYCDALSDDPGTYRWMAPEMIKHKSY 360
HS G+IHRDLKP N+++ + LKI DFG+A + T + APE+I Y
Sbjct: 145 HSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMVPFVVTRYYRAPEVILGMGY 204
Query: 361 GRKVDVYSFGLILWEMVAGTIPYEEMNPIQAAFAVVNKNLRPAIPGDCPPAMAAL 415
VD++S G I+ EM+ G + + + I V+ + P CP M L
Sbjct: 205 KENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTP-----CPEFMKKL 254
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 100/215 (46%), Gaps = 12/215 (5%)
Query: 202 DEPVAVKIIRIPDDDENETLAARLEKQFNREVALLSRLHNPNVIKFVAACKKPPVYCVIT 261
D VA+K + P +N+T A R RE+ L+ +++ N+I +
Sbjct: 43 DRNVAIKKLSRPF--QNQTHAKRA----YRELVLMKCVNHKNIISLLNVFTPQKTLEEFQ 96
Query: 262 E-YLSEGSLRAYLHKLEHKTLPLPKLIAIALDIARGMEYIHSQGVIHRDLKPENVLIDQE 320
+ YL + A L ++ L ++ + + G++++HS G+IHRDLKP N+++ +
Sbjct: 97 DVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSD 156
Query: 321 FHLKIADFGIACEEVYCDALSDDPGTYRWMAPEMIKHKSYGRKVDVYSFGLILWEMVAGT 380
LKI DFG+A ++ T + APE+I Y VD++S G I+ EMV
Sbjct: 157 CTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 216
Query: 381 IPYEEMNPIQAAFAVVNKNLRPAIPGDCPPAMAAL 415
I + + I V+ + P CP M L
Sbjct: 217 ILFPGRDYIDQWNKVIEQLGTP-----CPEFMKKL 246
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 89/167 (53%), Gaps = 6/167 (3%)
Query: 221 LAARLEKQFNREVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKT 280
L+AR ++ RE + L +PN+++ + + + +I + ++ G L + E+ +
Sbjct: 49 LSARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYS 108
Query: 281 LPLPKLIAIALDIARGMEYIHSQGVIHRDLKPENVLIDQEFH---LKIADFGIACE-EVY 336
I + + H GV+HR+LKPEN+L+ + +K+ADFG+A E E
Sbjct: 109 EADAS--HCIQQILEAVLHCHQMGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGE 166
Query: 337 CDALSDDPGTYRWMAPEMIKHKSYGRKVDVYSFGLILWEMVAGTIPY 383
A GT +++PE+++ YG+ VD+++ G+IL+ ++ G P+
Sbjct: 167 QQAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPF 213
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 55/88 (62%), Gaps = 3/88 (3%)
Query: 293 IARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIACEEVYCDALSDDPGTYRWMAP 352
I RG++YIHS +IHRDLKP N+ ++++ LKI DFG+A D ++ T + AP
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSNLAVNEDXELKILDFGLARHT--DDEMTGYVATRWYRAP 191
Query: 353 E-MIKHKSYGRKVDVYSFGLILWEMVAG 379
E M+ Y + VD++S G I+ E++ G
Sbjct: 192 EIMLNWMHYNQTVDIWSVGCIMAELLTG 219
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 55/88 (62%), Gaps = 3/88 (3%)
Query: 293 IARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIACEEVYCDALSDDPGTYRWMAP 352
I RG++YIHS +IHRDLKP N+ ++++ LKI DFG+A D ++ T + AP
Sbjct: 139 ILRGLKYIHSADIIHRDLKPSNLAVNEDXELKILDFGLARHT--DDEMTGYVATRWYRAP 196
Query: 353 E-MIKHKSYGRKVDVYSFGLILWEMVAG 379
E M+ Y + VD++S G I+ E++ G
Sbjct: 197 EIMLNWMHYNQTVDIWSVGCIMAELLTG 224
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 55/88 (62%), Gaps = 3/88 (3%)
Query: 293 IARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIACEEVYCDALSDDPGTYRWMAP 352
I RG++YIHS +IHRDLKP N+ ++++ LKI DFG+A D ++ T + AP
Sbjct: 139 ILRGLKYIHSADIIHRDLKPSNLAVNEDXELKILDFGLARHT--DDEMTGYVATRWYRAP 196
Query: 353 E-MIKHKSYGRKVDVYSFGLILWEMVAG 379
E M+ Y + VD++S G I+ E++ G
Sbjct: 197 EIMLNWMHYNQTVDIWSVGCIMAELLTG 224
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 96/206 (46%), Gaps = 26/206 (12%)
Query: 188 AHGAHSRLYHGIYKDEPVAVKIIRIPDDDENETLAARLEKQFNREVALLSRLHNPNVIKF 247
A G Y I + VA+K + P +N+T A R RE+ L+ +++ N+I
Sbjct: 36 AQGIVCAAYDAIL-ERNVAIKKLSRPF--QNQTHAKRA----YRELVLMKCVNHKNIIGL 88
Query: 248 VAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIALDIAR----------GM 297
+ V T S + +E L ++I + LD R G+
Sbjct: 89 LN---------VFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLCGI 139
Query: 298 EYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIACEEVYCDALSDDPGTYRWMAPEMIKH 357
+++HS G+IHRDLKP N+++ + LKI DFG+A ++ T + APE+I
Sbjct: 140 KHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILG 199
Query: 358 KSYGRKVDVYSFGLILWEMVAGTIPY 383
Y VD++S G I+ EM+ G + +
Sbjct: 200 MGYKENVDIWSVGCIMGEMIKGGVLF 225
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 55/88 (62%), Gaps = 3/88 (3%)
Query: 293 IARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIACEEVYCDALSDDPGTYRWMAP 352
I RG++YIHS +IHRDLKP N+ ++++ LKI DFG+A D ++ T + AP
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHT--DDEMTGYVATRWYRAP 191
Query: 353 E-MIKHKSYGRKVDVYSFGLILWEMVAG 379
E M+ Y + VD++S G I+ E++ G
Sbjct: 192 EIMLNAMHYNQTVDIWSVGCIMAELLTG 219
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 87/179 (48%), Gaps = 9/179 (5%)
Query: 231 REVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLI--A 288
RE+ +L +L +PN++ + ++ ++ EY LH+L+ +P+ + +
Sbjct: 51 REIRMLKQLKHPNLVNLLEVFRRKRRLHLVFEYCD----HTVLHELDRYQRGVPEHLVKS 106
Query: 289 IALDIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIACEEVYCDALSDDPGTYR 348
I + + + H IHRD+KPEN+LI + +K+ DFG A DD R
Sbjct: 107 ITWQTLQAVNFCHKHNCIHRDVKPENILITKHSVIKLCDFGFARLLTGPSDYYDDEVATR 166
Query: 349 WM-APE-MIKHKSYGRKVDVYSFGLILWEMVAGTIPYEEMNPIQAAFAVVNKNLRPAIP 405
W +PE ++ YG VDV++ G + E+++G + + + + ++ K L IP
Sbjct: 167 WYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLY-LIRKTLGDLIP 224
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 63/235 (26%), Positives = 108/235 (45%), Gaps = 25/235 (10%)
Query: 188 AHGAHSRLYHGIYKDEPVAVKIIRIPDDDENETLAARLEKQFNREVALLSRLHNPNVIKF 247
A G Y I + VA+K + P +N+T A R RE+ L+ +++ N+I
Sbjct: 36 AQGIVCAAYDAIL-ERNVAIKKLSRPF--QNQTHAKRA----YRELVLMKCVNHKNIIGL 88
Query: 248 VAAC-------KKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIALDIARGMEYI 300
+ + VY ++ E + + +L+H+ ++ + + G++++
Sbjct: 89 LNVFTPQKSLEEFQDVY-IVMELMDANLCQVIQMELDHE-----RMSYLLYQMLCGIKHL 142
Query: 301 HSQGVIHRDLKPENVLIDQEFHLKIADFGIACEEVYCDALSDDPGTYRWMAPEMIKHKSY 360
HS G+IHRDLKP N+++ + LKI DFG+A + + T + APE+I Y
Sbjct: 143 HSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMEPEVVTRYYRAPEVILGMGY 202
Query: 361 GRKVDVYSFGLILWEMVAGTIPYEEMNPIQAAFAVVNKNLRPAIPGDCPPAMAAL 415
VD++S G I+ EMV I + + I V+ + P CP M L
Sbjct: 203 KENVDIWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQLGTP-----CPAFMKKL 252
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 106/217 (48%), Gaps = 10/217 (4%)
Query: 218 NETLAARLEKQFNREVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLE 277
+ L+AR ++ RE + L + N+++ + + + ++ + ++ G L + E
Sbjct: 39 TKKLSARDHQKLEREARICRLLKHSNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVARE 98
Query: 278 HKTLPLPKLIAIALDIARGMEYIHSQGVIHRDLKPENVLIDQEFH---LKIADFGIACEE 334
+ + I + + H GV+HRDLKPEN+L+ + +K+ADFG+A E
Sbjct: 99 YYSEADAS--HCIQQILEAVLHCHQMGVVHRDLKPENLLLASKCKGAAVKLADFGLAIE- 155
Query: 335 VYCD--ALSDDPGTYRWMAPEMIKHKSYGRKVDVYSFGLILWEMVAGTIPY--EEMNPIQ 390
V D A GT +++PE+++ ++YG+ VD+++ G+IL+ ++ G P+ E+ + +
Sbjct: 156 VQGDQQAWFGFAGTPGYLSPEVLRKEAYGKPVDIWACGVILYILLVGYPPFWDEDQHKLY 215
Query: 391 AAFAVVNKNLRPAIPGDCPPAMAALIEQCWSLQPDKR 427
+ P LI Q ++ P KR
Sbjct: 216 QQIKAGAYDFPSPEWDTVTPEAKNLINQMLTINPAKR 252
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 55/189 (29%), Positives = 91/189 (48%), Gaps = 25/189 (13%)
Query: 205 VAVKIIRIPDDDENETLAARLEKQFNREVALLSRLHNPNVIKFVAACKKPPVYCVITEYL 264
VA+K + P +N+T A R RE+ L+ +++ N+I + V T
Sbjct: 52 VAIKKLSRPF--QNQTHAKRA----YRELVLMKCVNHKNIIGLLN---------VFTPQK 96
Query: 265 SEGSLRAYLHKLEHKTLPLPKLIAIALDIAR----------GMEYIHSQGVIHRDLKPEN 314
S + +E L ++I + LD R G++++HS G+IHRDLKP N
Sbjct: 97 SLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSN 156
Query: 315 VLIDQEFHLKIADFGIACEEVYCDALSDDPGTYRWMAPEMIKHKSYGRKVDVYSFGLILW 374
+++ + LKI DFG+A ++ T + APE+I Y VD++S G I+
Sbjct: 157 IVVKSDATLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMG 216
Query: 375 EMVAGTIPY 383
EM+ G + +
Sbjct: 217 EMIKGGVLF 225
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 55/88 (62%), Gaps = 3/88 (3%)
Query: 293 IARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIACEEVYCDALSDDPGTYRWMAP 352
I RG++YIHS +IHRDLKP N+ ++++ LKI DFG+A D ++ T + AP
Sbjct: 145 ILRGLKYIHSADIIHRDLKPSNLAVNEDXELKILDFGLARHT--DDEMTGYVATRWYRAP 202
Query: 353 E-MIKHKSYGRKVDVYSFGLILWEMVAG 379
E M+ Y + VD++S G I+ E++ G
Sbjct: 203 EIMLNWMHYNQTVDIWSVGCIMAELLTG 230
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 57/236 (24%), Positives = 114/236 (48%), Gaps = 30/236 (12%)
Query: 158 FDHGGVRVNAVDAADEHTVDLSQLFLGLRFAHGAHSRLYHGIYKDE------PVAVKIIR 211
FDH V +TV +++ G RF ++K E +A KII+
Sbjct: 73 FDHRIVTAKQGAVNSFYTVSKTEILGGGRFGQ---------VHKCEETATGLKLAAKIIK 123
Query: 212 IPDDDENETLAARLEKQFNREVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRA 271
T + +++ E++++++L + N+I+ A + ++ EY+ G L
Sbjct: 124 --------TRGMKDKEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDGGEL-- 173
Query: 272 YLHKLEHKTLPLPKLIAIAL--DIARGMEYIHSQGVIHRDLKPENVL-IDQEF-HLKIAD 327
++ ++ L +L I I G+ ++H ++H DLKPEN+L ++++ +KI D
Sbjct: 174 -FDRIIDESYNLTELDTILFMKQICEGIRHMHQMYILHLDLKPENILCVNRDAKQIKIID 232
Query: 328 FGIACEEVYCDALSDDPGTYRWMAPEMIKHKSYGRKVDVYSFGLILWEMVAGTIPY 383
FG+A + L + GT ++APE++ + D++S G+I + +++G P+
Sbjct: 233 FGLARRYKPREKLKVNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPF 288
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 99/203 (48%), Gaps = 20/203 (9%)
Query: 188 AHGAHSRLYHGIYKDEPVAVKIIRIPDDDENETLAARLEKQFNREVALLSRLHNPNVIKF 247
A G Y I + VA+K + P +N+T A R RE+ L+ +++ N+I
Sbjct: 36 AQGIVCAAYDAIL-ERNVAIKKLSRPF--QNQTHAKRA----YRELVLMKCVNHKNIIGL 88
Query: 248 VAAC-------KKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIALDIARGMEYI 300
+ + VY ++ E + + +L+H+ ++ + + G++++
Sbjct: 89 LNVFTPQKSLEEFQDVY-IVMELMDANLCQVIQMELDHE-----RMSYLLYQMLCGIKHL 142
Query: 301 HSQGVIHRDLKPENVLIDQEFHLKIADFGIACEEVYCDALSDDPGTYRWMAPEMIKHKSY 360
HS G+IHRDLKP N+++ + LKI DFG+A ++ T + APE+I Y
Sbjct: 143 HSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGY 202
Query: 361 GRKVDVYSFGLILWEMVAGTIPY 383
VD++S G I+ EM+ G + +
Sbjct: 203 KENVDIWSVGCIMGEMIKGGVLF 225
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 55/88 (62%), Gaps = 3/88 (3%)
Query: 293 IARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIACEEVYCDALSDDPGTYRWMAP 352
I RG++YIHS +IHRDLKP N+ ++++ LKI DFG+A D ++ T + AP
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHT--DDEMTGYVATRWYRAP 191
Query: 353 E-MIKHKSYGRKVDVYSFGLILWEMVAG 379
E M+ Y + VD++S G I+ E++ G
Sbjct: 192 EIMLNWMHYNQTVDIWSVGCIMAELLTG 219
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 55/88 (62%), Gaps = 3/88 (3%)
Query: 293 IARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIACEEVYCDALSDDPGTYRWMAP 352
I RG++YIHS +IHRDLKP N+ ++++ LKI DFG+A D ++ T + AP
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHT--DDEMTGYVATRWYRAP 191
Query: 353 E-MIKHKSYGRKVDVYSFGLILWEMVAG 379
E M+ Y + VD++S G I+ E++ G
Sbjct: 192 EIMLNWMHYNQTVDIWSVGCIMAELLTG 219
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 55/88 (62%), Gaps = 3/88 (3%)
Query: 293 IARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIACEEVYCDALSDDPGTYRWMAP 352
I RG++YIHS +IHRDLKP N+ ++++ LKI DFG+A D ++ T + AP
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHT--DDEMTGYVATRWYRAP 191
Query: 353 E-MIKHKSYGRKVDVYSFGLILWEMVAG 379
E M+ Y + VD++S G I+ E++ G
Sbjct: 192 EIMLNWMHYNQTVDIWSVGCIMAELLTG 219
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 55/88 (62%), Gaps = 3/88 (3%)
Query: 293 IARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIACEEVYCDALSDDPGTYRWMAP 352
I RG++YIHS +IHRDLKP N+ ++++ LKI DFG+A D ++ T + AP
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHT--DDEMTGYVATRWYRAP 191
Query: 353 E-MIKHKSYGRKVDVYSFGLILWEMVAG 379
E M+ Y + VD++S G I+ E++ G
Sbjct: 192 EIMLNWMHYNQTVDIWSVGCIMAELLTG 219
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 55/88 (62%), Gaps = 3/88 (3%)
Query: 293 IARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIACEEVYCDALSDDPGTYRWMAP 352
I RG++YIHS +IHRDLKP N+ ++++ LKI DFG+A D ++ T + AP
Sbjct: 130 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHT--DDEMTGYVATRWYRAP 187
Query: 353 E-MIKHKSYGRKVDVYSFGLILWEMVAG 379
E M+ Y + VD++S G I+ E++ G
Sbjct: 188 EIMLNWMHYNQTVDIWSVGCIMAELLTG 215
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 55/88 (62%), Gaps = 3/88 (3%)
Query: 293 IARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIACEEVYCDALSDDPGTYRWMAP 352
I RG++YIHS +IHRDLKP N+ ++++ LKI DFG+A D ++ T + AP
Sbjct: 131 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHT--DDEMTGYVATRWYRAP 188
Query: 353 E-MIKHKSYGRKVDVYSFGLILWEMVAG 379
E M+ Y + VD++S G I+ E++ G
Sbjct: 189 EIMLNWMHYNQTVDIWSVGCIMAELLTG 216
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 55/88 (62%), Gaps = 3/88 (3%)
Query: 293 IARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIACEEVYCDALSDDPGTYRWMAP 352
I RG++YIHS +IHRDLKP N+ ++++ LKI DFG+A D ++ T + AP
Sbjct: 140 ILRGLKYIHSADIIHRDLKPSNLAVNEDSELKILDFGLARHT--DDEMTGYVATRWYRAP 197
Query: 353 E-MIKHKSYGRKVDVYSFGLILWEMVAG 379
E M+ Y + VD++S G I+ E++ G
Sbjct: 198 EIMLNWMHYNQTVDIWSVGCIMAELLTG 225
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 55/88 (62%), Gaps = 3/88 (3%)
Query: 293 IARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIACEEVYCDALSDDPGTYRWMAP 352
I RG++YIHS +IHRDLKP N+ ++++ LKI DFG+A D ++ T + AP
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHT--DDEMTGYVATRWYRAP 191
Query: 353 E-MIKHKSYGRKVDVYSFGLILWEMVAG 379
E M+ Y + VD++S G I+ E++ G
Sbjct: 192 EIMLNWMHYNQTVDIWSVGCIMAELLTG 219
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 55/88 (62%), Gaps = 3/88 (3%)
Query: 293 IARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIACEEVYCDALSDDPGTYRWMAP 352
I RG++YIHS +IHRDLKP N+ ++++ LKI DFG+A D ++ T + AP
Sbjct: 136 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHT--DDEMTGYVATRWYRAP 193
Query: 353 E-MIKHKSYGRKVDVYSFGLILWEMVAG 379
E M+ Y + VD++S G I+ E++ G
Sbjct: 194 EIMLNWMHYNQTVDIWSVGCIMAELLTG 221
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 55/88 (62%), Gaps = 3/88 (3%)
Query: 293 IARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIACEEVYCDALSDDPGTYRWMAP 352
I RG++YIHS +IHRDLKP N+ ++++ LKI DFG+A D ++ T + AP
Sbjct: 139 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHT--DDEMTGYVATRWYRAP 196
Query: 353 E-MIKHKSYGRKVDVYSFGLILWEMVAG 379
E M+ Y + VD++S G I+ E++ G
Sbjct: 197 EIMLNWMHYNQTVDIWSVGCIMAELLTG 224
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 55/88 (62%), Gaps = 3/88 (3%)
Query: 293 IARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIACEEVYCDALSDDPGTYRWMAP 352
I RG++YIHS +IHRDLKP N+ ++++ LKI DFG+A D ++ T + AP
Sbjct: 133 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHT--DDEMTGYVATRWYRAP 190
Query: 353 E-MIKHKSYGRKVDVYSFGLILWEMVAG 379
E M+ Y + VD++S G I+ E++ G
Sbjct: 191 EIMLNWMHYNQTVDIWSVGCIMAELLTG 218
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 55/88 (62%), Gaps = 3/88 (3%)
Query: 293 IARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIACEEVYCDALSDDPGTYRWMAP 352
I RG++YIHS +IHRDLKP N+ ++++ LKI DFG+A D ++ T + AP
Sbjct: 130 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHT--DDEMTGYVATRWYRAP 187
Query: 353 E-MIKHKSYGRKVDVYSFGLILWEMVAG 379
E M+ Y + VD++S G I+ E++ G
Sbjct: 188 EIMLNWMHYNQTVDIWSVGCIMAELLTG 215
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 55/88 (62%), Gaps = 3/88 (3%)
Query: 293 IARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIACEEVYCDALSDDPGTYRWMAP 352
I RG++YIHS +IHRDLKP N+ ++++ LKI DFG+A D ++ T + AP
Sbjct: 131 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHT--DDEMTGYVATRWYRAP 188
Query: 353 E-MIKHKSYGRKVDVYSFGLILWEMVAG 379
E M+ Y + VD++S G I+ E++ G
Sbjct: 189 EIMLNWMHYNQTVDIWSVGCIMAELLTG 216
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 96/201 (47%), Gaps = 12/201 (5%)
Query: 186 RFAHGAHSRLYHGIYKD--EPVAVKIIRIPDDDENETLAARLEKQFNREVALLSRLHNPN 243
+ G + ++ ++ E VA+K +R+ DDDE +A RE+ LL L + N
Sbjct: 9 KIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSAL------REICLLKELKHKN 62
Query: 244 VIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIALDIARGMEYIHSQ 303
+++ ++ E+ + L+ Y P + + + +G+ + HS+
Sbjct: 63 IVRLHDVLHSDKKLTLVFEFCDQ-DLKKYFDSCNGDLDP-EIVKSFLFQLLKGLGFCHSR 120
Query: 304 GVIHRDLKPENVLIDQEFHLKIADFGIA-CEEVYCDALSDDPGTYRWMAPEMI-KHKSYG 361
V+HRDLKP+N+LI++ LK+A+FG+A + S + T + P+++ K Y
Sbjct: 121 NVLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLYS 180
Query: 362 RKVDVYSFGLILWEMVAGTIP 382
+D++S G I E+ P
Sbjct: 181 TSIDMWSAGCIFAELANAGRP 201
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 55/88 (62%), Gaps = 3/88 (3%)
Query: 293 IARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIACEEVYCDALSDDPGTYRWMAP 352
I RG++YIHS +IHRDLKP N+ ++++ LKI DFG+A D ++ T + AP
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHT--DDEMTGYVATRWYRAP 191
Query: 353 E-MIKHKSYGRKVDVYSFGLILWEMVAG 379
E M+ Y + VD++S G I+ E++ G
Sbjct: 192 EIMLNWMHYNQTVDIWSVGCIMAELLTG 219
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 55/88 (62%), Gaps = 3/88 (3%)
Query: 293 IARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIACEEVYCDALSDDPGTYRWMAP 352
I RG++YIHS +IHRDLKP N+ ++++ LKI DFG+A D ++ T + AP
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHT--DDEMTGYVATRWYRAP 191
Query: 353 E-MIKHKSYGRKVDVYSFGLILWEMVAG 379
E M+ Y + VD++S G I+ E++ G
Sbjct: 192 EIMLNWMHYNQTVDIWSVGCIMAELLTG 219
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 55/88 (62%), Gaps = 3/88 (3%)
Query: 293 IARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIACEEVYCDALSDDPGTYRWMAP 352
I RG++YIHS +IHRDLKP N+ ++++ LKI DFG+A D ++ T + AP
Sbjct: 139 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHT--DDEMTGYVATRWYRAP 196
Query: 353 E-MIKHKSYGRKVDVYSFGLILWEMVAG 379
E M+ Y + VD++S G I+ E++ G
Sbjct: 197 EIMLNWMHYNQTVDIWSVGCIMAELLTG 224
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 55/88 (62%), Gaps = 3/88 (3%)
Query: 293 IARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIACEEVYCDALSDDPGTYRWMAP 352
I RG++YIHS +IHRDLKP N+ ++++ LKI DFG+A D ++ T + AP
Sbjct: 132 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHT--DDEMTGYVATRWYRAP 189
Query: 353 E-MIKHKSYGRKVDVYSFGLILWEMVAG 379
E M+ Y + VD++S G I+ E++ G
Sbjct: 190 EIMLNWMHYNQTVDIWSVGCIMAELLTG 217
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 55/88 (62%), Gaps = 3/88 (3%)
Query: 293 IARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIACEEVYCDALSDDPGTYRWMAP 352
I RG++YIHS +IHRDLKP N+ ++++ LKI DFG+A D ++ T + AP
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHT--DDEMTGYVATRWYRAP 191
Query: 353 E-MIKHKSYGRKVDVYSFGLILWEMVAG 379
E M+ Y + VD++S G I+ E++ G
Sbjct: 192 EIMLNWMHYNQTVDIWSVGCIMAELLTG 219
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 55/88 (62%), Gaps = 3/88 (3%)
Query: 293 IARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIACEEVYCDALSDDPGTYRWMAP 352
I RG++YIHS +IHRDLKP N+ ++++ LKI DFG+A D ++ T + AP
Sbjct: 130 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHT--DDEMTGYVATRWYRAP 187
Query: 353 E-MIKHKSYGRKVDVYSFGLILWEMVAG 379
E M+ Y + VD++S G I+ E++ G
Sbjct: 188 EIMLNWMHYNQTVDIWSVGCIMAELLTG 215
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 55/88 (62%), Gaps = 3/88 (3%)
Query: 293 IARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIACEEVYCDALSDDPGTYRWMAP 352
I RG++YIHS +IHRDLKP N+ ++++ LKI DFG+A D ++ T + AP
Sbjct: 141 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHT--DDEMTGYVATRWYRAP 198
Query: 353 E-MIKHKSYGRKVDVYSFGLILWEMVAG 379
E M+ Y + VD++S G I+ E++ G
Sbjct: 199 EIMLNWMHYNQTVDIWSVGCIMAELLTG 226
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 55/88 (62%), Gaps = 3/88 (3%)
Query: 293 IARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIACEEVYCDALSDDPGTYRWMAP 352
I RG++YIHS +IHRDLKP N+ ++++ LKI DFG+A D ++ T + AP
Sbjct: 136 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHT--DDEMTGYVATRWYRAP 193
Query: 353 E-MIKHKSYGRKVDVYSFGLILWEMVAG 379
E M+ Y + VD++S G I+ E++ G
Sbjct: 194 EIMLNWMHYNQTVDIWSVGCIMAELLTG 221
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 55/88 (62%), Gaps = 3/88 (3%)
Query: 293 IARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIACEEVYCDALSDDPGTYRWMAP 352
I RG++YIHS +IHRDLKP N+ ++++ LKI DFG+A D ++ T + AP
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHT--DDEMTGYVATRWYRAP 191
Query: 353 E-MIKHKSYGRKVDVYSFGLILWEMVAG 379
E M+ Y + VD++S G I+ E++ G
Sbjct: 192 EIMLNWMHYNQTVDIWSVGCIMAELLTG 219
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 55/88 (62%), Gaps = 3/88 (3%)
Query: 293 IARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIACEEVYCDALSDDPGTYRWMAP 352
I RG++YIHS +IHRDLKP N+ ++++ LKI DFG+A D ++ T + AP
Sbjct: 136 ILRGLKYIHSADIIHRDLKPSNLAVNEDSELKILDFGLARHT--DDEMTGYVATRWYRAP 193
Query: 353 E-MIKHKSYGRKVDVYSFGLILWEMVAG 379
E M+ Y + VD++S G I+ E++ G
Sbjct: 194 EIMLNWMHYNQTVDIWSVGCIMAELLTG 221
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 55/88 (62%), Gaps = 3/88 (3%)
Query: 293 IARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIACEEVYCDALSDDPGTYRWMAP 352
I RG++YIHS +IHRDLKP N+ ++++ LKI DFG+A D ++ T + AP
Sbjct: 154 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHT--DDEMTGYVATRWYRAP 211
Query: 353 E-MIKHKSYGRKVDVYSFGLILWEMVAG 379
E M+ Y + VD++S G I+ E++ G
Sbjct: 212 EIMLNWMHYNQTVDIWSVGCIMAELLTG 239
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 55/88 (62%), Gaps = 3/88 (3%)
Query: 293 IARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIACEEVYCDALSDDPGTYRWMAP 352
I RG++YIHS +IHRDLKP N+ ++++ LKI DFG+A D ++ T + AP
Sbjct: 136 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHT--DDEMTGYVATRWYRAP 193
Query: 353 E-MIKHKSYGRKVDVYSFGLILWEMVAG 379
E M+ Y + VD++S G I+ E++ G
Sbjct: 194 EIMLNWMHYNQTVDIWSVGCIMAELLTG 221
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 55/88 (62%), Gaps = 3/88 (3%)
Query: 293 IARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIACEEVYCDALSDDPGTYRWMAP 352
I RG++YIHS +IHRDLKP N+ ++++ LKI DFG+A D ++ T + AP
Sbjct: 140 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHT--DDEMTGYVATRWYRAP 197
Query: 353 E-MIKHKSYGRKVDVYSFGLILWEMVAG 379
E M+ Y + VD++S G I+ E++ G
Sbjct: 198 EIMLNWMHYNQTVDIWSVGCIMAELLTG 225
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 55/88 (62%), Gaps = 3/88 (3%)
Query: 293 IARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIACEEVYCDALSDDPGTYRWMAP 352
I RG++YIHS +IHRDLKP N+ ++++ LKI DFG+A D ++ T + AP
Sbjct: 140 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHT--DDEMTGYVATRWYRAP 197
Query: 353 E-MIKHKSYGRKVDVYSFGLILWEMVAG 379
E M+ Y + VD++S G I+ E++ G
Sbjct: 198 EIMLNWMHYNQTVDIWSVGCIMAELLTG 225
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 55/88 (62%), Gaps = 3/88 (3%)
Query: 293 IARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIACEEVYCDALSDDPGTYRWMAP 352
I RG++YIHS +IHRDLKP N+ ++++ LKI DFG+A D ++ T + AP
Sbjct: 144 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHT--DDEMTGYVATRWYRAP 201
Query: 353 E-MIKHKSYGRKVDVYSFGLILWEMVAG 379
E M+ Y + VD++S G I+ E++ G
Sbjct: 202 EIMLNWMHYNQTVDIWSVGCIMAELLTG 229
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 55/88 (62%), Gaps = 3/88 (3%)
Query: 293 IARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIACEEVYCDALSDDPGTYRWMAP 352
I RG++YIHS +IHRDLKP N+ ++++ LKI DFG+A D ++ T + AP
Sbjct: 146 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHT--DDEMTGYVATRWYRAP 203
Query: 353 E-MIKHKSYGRKVDVYSFGLILWEMVAG 379
E M+ Y + VD++S G I+ E++ G
Sbjct: 204 EIMLNWMHYNQTVDIWSVGCIMAELLTG 231
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 55/88 (62%), Gaps = 3/88 (3%)
Query: 293 IARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIACEEVYCDALSDDPGTYRWMAP 352
I RG++YIHS +IHRDLKP N+ ++++ LKI DFG+A D ++ T + AP
Sbjct: 145 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHT--DDEMTGYVATRWYRAP 202
Query: 353 E-MIKHKSYGRKVDVYSFGLILWEMVAG 379
E M+ Y + VD++S G I+ E++ G
Sbjct: 203 EIMLNWMHYNQTVDIWSVGCIMAELLTG 230
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 55/88 (62%), Gaps = 3/88 (3%)
Query: 293 IARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIACEEVYCDALSDDPGTYRWMAP 352
I RG++YIHS +IHRDLKP N+ ++++ LKI DFG+A D ++ T + AP
Sbjct: 157 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHT--DDEMTGYVATRWYRAP 214
Query: 353 E-MIKHKSYGRKVDVYSFGLILWEMVAG 379
E M+ Y + VD++S G I+ E++ G
Sbjct: 215 EIMLNWMHYNQTVDIWSVGCIMAELLTG 242
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 55/88 (62%), Gaps = 3/88 (3%)
Query: 293 IARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIACEEVYCDALSDDPGTYRWMAP 352
I RG++YIHS +IHRDLKP N+ ++++ LKI DFG+A D ++ T + AP
Sbjct: 146 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHT--DDEMTGYVATRWYRAP 203
Query: 353 E-MIKHKSYGRKVDVYSFGLILWEMVAG 379
E M+ Y + VD++S G I+ E++ G
Sbjct: 204 EIMLNWMHYNQTVDIWSVGCIMAELLTG 231
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 55/88 (62%), Gaps = 3/88 (3%)
Query: 293 IARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIACEEVYCDALSDDPGTYRWMAP 352
I RG++YIHS +IHRDLKP N+ ++++ LKI DFG+A D ++ T + AP
Sbjct: 146 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHT--DDEMTGYVATRWYRAP 203
Query: 353 E-MIKHKSYGRKVDVYSFGLILWEMVAG 379
E M+ Y + VD++S G I+ E++ G
Sbjct: 204 EIMLNWMHYNQTVDIWSVGCIMAELLTG 231
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 55/88 (62%), Gaps = 3/88 (3%)
Query: 293 IARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIACEEVYCDALSDDPGTYRWMAP 352
I RG++YIHS +IHRDLKP N+ ++++ LKI DFG+A D ++ T + AP
Sbjct: 130 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHT--DDEMAGFVATRWYRAP 187
Query: 353 E-MIKHKSYGRKVDVYSFGLILWEMVAG 379
E M+ Y + VD++S G I+ E++ G
Sbjct: 188 EIMLNWMHYNQTVDIWSVGCIMAELLTG 215
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 55/88 (62%), Gaps = 3/88 (3%)
Query: 293 IARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIACEEVYCDALSDDPGTYRWMAP 352
I RG++YIHS +IHRDLKP N+ ++++ LKI DFG+A D ++ T + AP
Sbjct: 140 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHT--DDEMTGYVATRWYRAP 197
Query: 353 E-MIKHKSYGRKVDVYSFGLILWEMVAG 379
E M+ Y + VD++S G I+ E++ G
Sbjct: 198 EIMLNWMHYNQTVDIWSVGCIMAELLTG 225
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 55/88 (62%), Gaps = 3/88 (3%)
Query: 293 IARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIACEEVYCDALSDDPGTYRWMAP 352
I RG++YIHS +IHRDLKP N+ ++++ LKI DFG+A D ++ T + AP
Sbjct: 153 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHT--DDEMTGYVATRWYRAP 210
Query: 353 E-MIKHKSYGRKVDVYSFGLILWEMVAG 379
E M+ Y + VD++S G I+ E++ G
Sbjct: 211 EIMLNWMHYNQTVDIWSVGCIMAELLTG 238
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 84/174 (48%), Gaps = 27/174 (15%)
Query: 231 REVALLSRLHNPNVIKFVAACKKPPVY--CVITEYLSEGSLRAYLHKLEHK-TLPLPKLI 287
RE +L +L++ N++K A ++ +I E+ GSL L + + LP + +
Sbjct: 56 REFEVLKKLNHKNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFL 115
Query: 288 AIALDIARGMEYIHSQGVIHRDLKPENVLI----DQEFHLKIADFGIACEEVYCDALSDD 343
+ D+ GM ++ G++HR++KP N++ D + K+ DFG A E L DD
Sbjct: 116 IVLRDVVGGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARE------LEDD 169
Query: 344 P------GTYRWMAPEMIK--------HKSYGRKVDVYSFGLILWEMVAGTIPY 383
GT ++ P+M + K YG VD++S G+ + G++P+
Sbjct: 170 EQFVXLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPF 223
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 55/88 (62%), Gaps = 3/88 (3%)
Query: 293 IARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIACEEVYCDALSDDPGTYRWMAP 352
I RG++YIHS +IHRDLKP N+ ++++ LKI DFG+A D ++ T + AP
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHT--DDEMAGFVATRWYRAP 191
Query: 353 E-MIKHKSYGRKVDVYSFGLILWEMVAG 379
E M+ Y + VD++S G I+ E++ G
Sbjct: 192 EIMLNWMHYNQTVDIWSVGCIMAELLTG 219
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 55/88 (62%), Gaps = 3/88 (3%)
Query: 293 IARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIACEEVYCDALSDDPGTYRWMAP 352
I RG++YIHS +IHRDLKP N+ ++++ LKI DFG+A D ++ T + AP
Sbjct: 154 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHT--DDEMTGYVATRWYRAP 211
Query: 353 E-MIKHKSYGRKVDVYSFGLILWEMVAG 379
E M+ Y + VD++S G I+ E++ G
Sbjct: 212 EIMLNWMHYNQTVDIWSVGCIMAELLTG 239
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 82/168 (48%), Gaps = 15/168 (8%)
Query: 231 REVALLSRLHNPNVIKFVAACKKPPVY--CVITEYLSEGSLRAYLHKLEHK-TLPLPKLI 287
RE +L +L++ N++K A ++ +I E+ GSL L + + LP + +
Sbjct: 56 REFEVLKKLNHKNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFL 115
Query: 288 AIALDIARGMEYIHSQGVIHRDLKPENVLI----DQEFHLKIADFGIACEEVYCDALSDD 343
+ D+ GM ++ G++HR++KP N++ D + K+ DFG A E +
Sbjct: 116 IVLRDVVGGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVSL 175
Query: 344 PGTYRWMAPEMIK--------HKSYGRKVDVYSFGLILWEMVAGTIPY 383
GT ++ P+M + K YG VD++S G+ + G++P+
Sbjct: 176 YGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPF 223
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 55/88 (62%), Gaps = 3/88 (3%)
Query: 293 IARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIACEEVYCDALSDDPGTYRWMAP 352
I RG++YIHS +IHRDLKP N+ ++++ LKI DFG+A D ++ T + AP
Sbjct: 153 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHT--DDEMTGYVATRWYRAP 210
Query: 353 E-MIKHKSYGRKVDVYSFGLILWEMVAG 379
E M+ Y + VD++S G I+ E++ G
Sbjct: 211 EIMLNWMHYNQTVDIWSVGCIMAELLTG 238
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 55/88 (62%), Gaps = 3/88 (3%)
Query: 293 IARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIACEEVYCDALSDDPGTYRWMAP 352
I RG++YIHS +IHRDLKP N+ ++++ LKI DFG+A D ++ T + AP
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHT--DDEMAGFVATRWYRAP 191
Query: 353 E-MIKHKSYGRKVDVYSFGLILWEMVAG 379
E M+ Y + VD++S G I+ E++ G
Sbjct: 192 EIMLNWMHYNQTVDIWSVGCIMAELLTG 219
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 63/235 (26%), Positives = 108/235 (45%), Gaps = 25/235 (10%)
Query: 188 AHGAHSRLYHGIYKDEPVAVKIIRIPDDDENETLAARLEKQFNREVALLSRLHNPNVIKF 247
A G Y I + VA+K + P +N+T A R RE+ L+ +++ N+I
Sbjct: 36 AQGIVCAAYDAIL-ERNVAIKKLSRPF--QNQTHAKRA----YRELVLMKCVNHKNIIGL 88
Query: 248 VAAC-------KKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIALDIARGMEYI 300
+ + VY ++ E + + +L+H+ ++ + + G++++
Sbjct: 89 LNVFTPQKSLEEFQDVY-IVMELMDANLCQVIQMELDHE-----RMSYLLYQMLCGIKHL 142
Query: 301 HSQGVIHRDLKPENVLIDQEFHLKIADFGIACEEVYCDALSDDPGTYRWMAPEMIKHKSY 360
HS G+IHRDLKP N+++ + LKI DFG+A + + T + APE+I Y
Sbjct: 143 HSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMEPEVVTRYYRAPEVILGMGY 202
Query: 361 GRKVDVYSFGLILWEMVAGTIPYEEMNPIQAAFAVVNKNLRPAIPGDCPPAMAAL 415
VD++S G I+ EMV I + + I V+ + P CP M L
Sbjct: 203 KENVDLWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQLGTP-----CPEFMKKL 252
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 38/92 (41%), Positives = 55/92 (59%), Gaps = 11/92 (11%)
Query: 293 IARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIACEEVYCDALSDDPGTY---RW 349
I RG++YIHS +IHRDLKP N+ ++++ LKI DFG+ C D+ Y RW
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSNLAVNEDSELKILDFGL------CRHTDDEMTGYVATRW 187
Query: 350 M-APE-MIKHKSYGRKVDVYSFGLILWEMVAG 379
APE M+ Y + VD++S G I+ E++ G
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 219
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 54/88 (61%), Gaps = 3/88 (3%)
Query: 293 IARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIACEEVYCDALSDDPGTYRWMAP 352
I RG++YIHS +IHRDLKP N+ ++++ LKI DFG+A D + T + AP
Sbjct: 154 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHT--DDEMXGXVATRWYRAP 211
Query: 353 E-MIKHKSYGRKVDVYSFGLILWEMVAG 379
E M+ Y + VD++S G I+ E++ G
Sbjct: 212 EIMLNWMHYNQTVDIWSVGCIMAELLTG 239
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 40/134 (29%), Positives = 69/134 (51%), Gaps = 10/134 (7%)
Query: 259 VITEYLSEGSLRAY------LHKLEHKTLPLPKLIAIALDIARGMEYIHSQ-GVIHRDLK 311
+I EY+ S+ + L K +P+ + I + YIH++ + HRD+K
Sbjct: 120 IIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHNEKNICHRDVK 179
Query: 312 PENVLIDQEFHLKIADFGIACEEVYCDALSDDPGTYRWMAPEMIKHKS--YGRKVDVYSF 369
P N+L+D+ +K++DFG E + + GTY +M PE ++S G KVD++S
Sbjct: 180 PSNILMDKNGRVKLSDFG-ESEYMVDKKIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSL 238
Query: 370 GLILWEMVAGTIPY 383
G+ L+ M +P+
Sbjct: 239 GICLYVMFYNVVPF 252
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 54/88 (61%), Gaps = 3/88 (3%)
Query: 293 IARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIACEEVYCDALSDDPGTYRWMAP 352
I RG++YIHS +IHRDLKP N+ ++++ LKI DFG+A D + T + AP
Sbjct: 157 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHT--DDEMXGYVATRWYRAP 214
Query: 353 E-MIKHKSYGRKVDVYSFGLILWEMVAG 379
E M+ Y + VD++S G I+ E++ G
Sbjct: 215 EIMLNWMHYNQTVDIWSVGCIMAELLTG 242
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 54/88 (61%), Gaps = 3/88 (3%)
Query: 293 IARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIACEEVYCDALSDDPGTYRWMAP 352
I RG++YIHS +IHRDLKP N+ ++++ LKI DFG+A D ++ T + AP
Sbjct: 163 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHT--DDEMTGYVATRWYRAP 220
Query: 353 E-MIKHKSYGRKVDVYSFGLILWEMVAG 379
E M+ Y VD++S G I+ E++ G
Sbjct: 221 EIMLNWMHYNMTVDIWSVGCIMAELLTG 248
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 86/180 (47%), Gaps = 11/180 (6%)
Query: 206 AVKIIRIPDDDENETLAARLEKQFNREVALLSRLHNPNVIKFVAACKKPPVYCVITEYLS 265
A K + P + + ET+ +E+ +S L +P ++ A + +I E++S
Sbjct: 80 AAKFVMTPHESDKETV--------RKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMS 131
Query: 266 EGSLRAYLHKLEHKTLPLPKLIAIALDIARGMEYIHSQGVIHRDLKPENVLI--DQEFHL 323
G L + EH + + + + +G+ ++H +H DLKPEN++ + L
Sbjct: 132 GGELFEKVAD-EHNKMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTTKRSNEL 190
Query: 324 KIADFGIACEEVYCDALSDDPGTYRWMAPEMIKHKSYGRKVDVYSFGLILWEMVAGTIPY 383
K+ DFG+ ++ GT + APE+ + K G D++S G++ + +++G P+
Sbjct: 191 KLIDFGLTAHLDPKQSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPF 250
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 103/203 (50%), Gaps = 21/203 (10%)
Query: 204 PVAVKII--RIPDDDENETLA-ARLEKQFNREVALLSRLHNPNVI---KFVAACKKPPVY 257
PVA+K + + D L+ + L K+ RE+ LL+ H+PN++ ++P ++
Sbjct: 48 PVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNILGLRDIFVHFEEPAMH 107
Query: 258 CVITEYLSEGSLRAYLHKLEH--KTLPLPKLIAIAL-DIARGMEYIHSQGVIHRDLKPEN 314
+ YL +R L ++ H + + P+ I + I G+ +H GV+HRDL P N
Sbjct: 108 KL---YLVTELMRTDLAQVIHDQRIVISPQHIQYFMYHILLGLHVLHEAGVVHRDLHPGN 164
Query: 315 VLIDQEFHLKIADFGIACEEVYCDALSDDPGTYRWM-APEMI-KHKSYGRKVDVYSFGLI 372
+L+ + I DF +A E+ DA T+RW APE++ + K + + VD++S G +
Sbjct: 165 ILLADNNDITICDFNLAREDT-ADANKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCV 223
Query: 373 LWEMVA------GTIPYEEMNPI 389
+ EM G+ Y ++N I
Sbjct: 224 MAEMFNRKALFRGSTFYNQLNKI 246
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 103/203 (50%), Gaps = 21/203 (10%)
Query: 204 PVAVKII--RIPDDDENETLA-ARLEKQFNREVALLSRLHNPNVI---KFVAACKKPPVY 257
PVA+K + + D L+ + L K+ RE+ LL+ H+PN++ ++P ++
Sbjct: 48 PVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNILGLRDIFVHFEEPAMH 107
Query: 258 CVITEYLSEGSLRAYLHKLEH--KTLPLPKLIAIAL-DIARGMEYIHSQGVIHRDLKPEN 314
+ YL +R L ++ H + + P+ I + I G+ +H GV+HRDL P N
Sbjct: 108 KL---YLVTELMRTDLAQVIHDQRIVISPQHIQYFMYHILLGLHVLHEAGVVHRDLHPGN 164
Query: 315 VLIDQEFHLKIADFGIACEEVYCDALSDDPGTYRWM-APEMI-KHKSYGRKVDVYSFGLI 372
+L+ + I DF +A E+ DA T+RW APE++ + K + + VD++S G +
Sbjct: 165 ILLADNNDITICDFNLAREDT-ADANKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCV 223
Query: 373 LWEMVA------GTIPYEEMNPI 389
+ EM G+ Y ++N I
Sbjct: 224 MAEMFNRKALFRGSTFYNQLNKI 246
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 64/285 (22%), Positives = 124/285 (43%), Gaps = 28/285 (9%)
Query: 174 HTVDLSQLFLGLRFAHGAHSRLYHGIYKDEPVAVKIIRIPDDDENETLAARLEK------ 227
H + L G ++++ G+ ++ ++ E E L L+K
Sbjct: 3 HKIRNEDLIFNESLGQGTFTKIFKGVRREVGDYGQL------HETEVLLKVLDKAHRNYS 56
Query: 228 -QFNREVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKL 286
F +++S+L + +++ C ++ E++ GSL YL K ++ L KL
Sbjct: 57 ESFFEAASMMSKLSHKHLVLNYGVCVCGDENILVQEFVKFGSLDTYLKKNKNCINILWKL 116
Query: 287 IAIALDIARGMEYIHSQGVIHRDLKPENVLIDQEF--------HLKIADFGIACEEVYCD 338
+A +A M ++ +IH ++ +N+L+ +E +K++D GI+ + D
Sbjct: 117 -EVAKQLAAAMHFLEENTLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPKD 175
Query: 339 ALSDDPGTYRWMAPEMIKH-KSYGRKVDVYSFGLILWEMVAGTIPYEEMNPIQAAFAVVN 397
L + W+ PE I++ K+ D +SFG LWE+ +G + ++ + + +
Sbjct: 176 ILQE---RIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGG--DKPLSALDSQRKLQF 230
Query: 398 KNLRPAIPGDCPPAMAALIEQCWSLQPDKRPEFWHIVKVLEQFET 442
R +P +A LI C +PD RP F I++ L T
Sbjct: 231 YEDRHQLPAPKAAELANLINNCMDYEPDHRPSFRAIIRDLNSLFT 275
>pdb|1HOW|A Chain A, The X-Ray Crystal Structure Of Sky1p, An Sr Protein Kinase
In Yeast
pdb|2JD5|A Chain A, Sky1p Bound To Npl3p-Derived Substrate Peptide
pdb|2JD5|B Chain B, Sky1p Bound To Npl3p-Derived Substrate Peptide
Length = 373
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/136 (30%), Positives = 77/136 (56%), Gaps = 14/136 (10%)
Query: 258 CVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIALDIARGMEYIHSQ-GVIHRDLKPENVL 316
++ E L E +L A + K EH+ +PL + I+ + G++Y+H + G+IH D+KPENVL
Sbjct: 106 VMVFEVLGE-NLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRCGIIHTDIKPENVL 164
Query: 317 I------DQEFHLKIADFGIAC--EEVYCDALSDDPGTYRWMAPEMIKHKSYGRKVDVYS 368
+ + +KIAD G AC +E Y +++ T + +PE++ +G D++S
Sbjct: 165 MEIVDSPENLIQIKIADLGNACWYDEHYTNSIQ----TREYRSPEVLLGAPWGCGADIWS 220
Query: 369 FGLILWEMVAGTIPYE 384
+++E++ G +E
Sbjct: 221 TACLIFELITGDFLFE 236
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/184 (23%), Positives = 87/184 (47%), Gaps = 11/184 (5%)
Query: 206 AVKIIRIPDDDENETLAARLEKQFNREVALLSRLHNPNVIKFVAACKKPPVYCVITEYLS 265
A K + P + + ET+ +E+ +S L +P ++ A + +I E++S
Sbjct: 186 AAKFVMTPHESDKETV--------RKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMS 237
Query: 266 EGSLRAYLHKLEHKTLPLPKLIAIALDIARGMEYIHSQGVIHRDLKPENVLI--DQEFHL 323
G L + EH + + + + +G+ ++H +H DLKPEN++ + L
Sbjct: 238 GGELFEKVAD-EHNKMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTTKRSNEL 296
Query: 324 KIADFGIACEEVYCDALSDDPGTYRWMAPEMIKHKSYGRKVDVYSFGLILWEMVAGTIPY 383
K+ DFG+ ++ GT + APE+ + K G D++S G++ + +++G P+
Sbjct: 297 KLIDFGLTAHLDPKQSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPF 356
Query: 384 EEMN 387
N
Sbjct: 357 GGEN 360
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/235 (26%), Positives = 108/235 (45%), Gaps = 25/235 (10%)
Query: 188 AHGAHSRLYHGIYKDEPVAVKIIRIPDDDENETLAARLEKQFNREVALLSRLHNPNVIKF 247
A G Y I + VA+K + P +N+T A R RE+ L+ +++ N+I
Sbjct: 41 AQGIVCAAYDAIL-ERNVAIKKLSRPF--QNQTHAKRA----YRELVLMKCVNHKNIIGL 93
Query: 248 VAAC-------KKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIALDIARGMEYI 300
+ + VY ++ E + + +L+H+ ++ + + G++++
Sbjct: 94 LNVFTPQKSLEEFQDVY-IVMELMDANLCQVIQMELDHE-----RMSYLLYQMLCGIKHL 147
Query: 301 HSQGVIHRDLKPENVLIDQEFHLKIADFGIACEEVYCDALSDDPGTYRWMAPEMIKHKSY 360
HS G+IHRDLKP N+++ + LKI DFG+A ++ T + APE+I Y
Sbjct: 148 HSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGY 207
Query: 361 GRKVDVYSFGLILWEMVAGTIPYEEMNPIQAAFAVVNKNLRPAIPGDCPPAMAAL 415
VD++S G I+ EMV I + + I V+ + P CP M L
Sbjct: 208 KENVDLWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQLGTP-----CPEFMKKL 257
>pdb|1Q8Y|A Chain A, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Y|B Chain B, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Z|A Chain A, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q8Z|B Chain B, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q97|A Chain A, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q97|B Chain B, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q99|A Chain A, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
pdb|1Q99|B Chain B, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
Length = 373
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/136 (30%), Positives = 77/136 (56%), Gaps = 14/136 (10%)
Query: 258 CVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIALDIARGMEYIHSQ-GVIHRDLKPENVL 316
++ E L E +L A + K EH+ +PL + I+ + G++Y+H + G+IH D+KPENVL
Sbjct: 106 VMVFEVLGE-NLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRCGIIHTDIKPENVL 164
Query: 317 I------DQEFHLKIADFGIAC--EEVYCDALSDDPGTYRWMAPEMIKHKSYGRKVDVYS 368
+ + +KIAD G AC +E Y +++ T + +PE++ +G D++S
Sbjct: 165 MEIVDSPENLIQIKIADLGNACWYDEHYTNSIQ----TREYRSPEVLLGAPWGCGADIWS 220
Query: 369 FGLILWEMVAGTIPYE 384
+++E++ G +E
Sbjct: 221 TACLIFELITGDFLFE 236
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 90/184 (48%), Gaps = 9/184 (4%)
Query: 206 AVKIIRIPDDDENETLAARLEKQFNREVALLSRLHNPNVIKFVAACKKPPVYCVITEYLS 265
AVKI+ + + L+ + RE ++ L +P++++ + + ++ E++
Sbjct: 55 AVKIVDVAKFTSSPGLST---EDLKREASICHMLKHPHIVELLETYSSDGMLYMVFEFMD 111
Query: 266 EGSLRAYLHKLEHKTLPLPKLIA--IALDIARGMEYIHSQGVIHRDLKPENVLI---DQE 320
L + K + +A I + Y H +IHRD+KP VL+ +
Sbjct: 112 GADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDNNIIHRDVKPHCVLLASKENS 171
Query: 321 FHLKIADFGIACEEVYCDALSDD-PGTYRWMAPEMIKHKSYGRKVDVYSFGLILWEMVAG 379
+K+ FG+A + ++ GT +MAPE++K + YG+ VDV+ G+IL+ +++G
Sbjct: 172 APVKLGGFGVAIQLGESGLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSG 231
Query: 380 TIPY 383
+P+
Sbjct: 232 CLPF 235
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 35/88 (39%), Positives = 55/88 (62%), Gaps = 3/88 (3%)
Query: 293 IARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIACEEVYCDALSDDPGTYRWMAP 352
I RG++YIHS +IHRDLKP N+ ++++ LKI D+G+A D ++ T + AP
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDYGLARHT--DDEMTGYVATRWYRAP 191
Query: 353 E-MIKHKSYGRKVDVYSFGLILWEMVAG 379
E M+ Y + VD++S G I+ E++ G
Sbjct: 192 EIMLNWMHYNQTVDIWSVGCIMAELLTG 219
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/235 (26%), Positives = 108/235 (45%), Gaps = 25/235 (10%)
Query: 188 AHGAHSRLYHGIYKDEPVAVKIIRIPDDDENETLAARLEKQFNREVALLSRLHNPNVIKF 247
A G Y I + VA+K + P +N+T A R RE+ L+ +++ N+I
Sbjct: 30 AQGIVCAAYDAIL-ERNVAIKKLSRPF--QNQTHAKRA----YRELVLMKCVNHKNIIGL 82
Query: 248 VAAC-------KKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIALDIARGMEYI 300
+ + VY ++ E + + +L+H+ ++ + + G++++
Sbjct: 83 LNVFTPQKSLEEFQDVY-IVMELMDANLCQVIQMELDHE-----RMSYLLYQMLCGIKHL 136
Query: 301 HSQGVIHRDLKPENVLIDQEFHLKIADFGIACEEVYCDALSDDPGTYRWMAPEMIKHKSY 360
HS G+IHRDLKP N+++ + LKI DFG+A ++ T + APE+I Y
Sbjct: 137 HSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGY 196
Query: 361 GRKVDVYSFGLILWEMVAGTIPYEEMNPIQAAFAVVNKNLRPAIPGDCPPAMAAL 415
VD++S G I+ EMV I + + I V+ + P CP M L
Sbjct: 197 KENVDLWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQLGTP-----CPEFMKKL 246
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/285 (22%), Positives = 124/285 (43%), Gaps = 28/285 (9%)
Query: 174 HTVDLSQLFLGLRFAHGAHSRLYHGIYKDEPVAVKIIRIPDDDENETLAARLEK------ 227
H + L G ++++ G+ ++ ++ E E L L+K
Sbjct: 3 HKIRNEDLIFNESLGQGTFTKIFKGVRREVGDYGQL------HETEVLLKVLDKAHRNYS 56
Query: 228 -QFNREVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKL 286
F +++S+L + +++ C ++ E++ GSL YL K ++ L KL
Sbjct: 57 ESFFEAASMMSKLSHKHLVLNYGVCFCGDENILVQEFVKFGSLDTYLKKNKNCINILWKL 116
Query: 287 IAIALDIARGMEYIHSQGVIHRDLKPENVLIDQEF--------HLKIADFGIACEEVYCD 338
+A +A M ++ +IH ++ +N+L+ +E +K++D GI+ + D
Sbjct: 117 -EVAKQLAWAMHFLEENTLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPKD 175
Query: 339 ALSDDPGTYRWMAPEMIKH-KSYGRKVDVYSFGLILWEMVAGTIPYEEMNPIQAAFAVVN 397
L + W+ PE I++ K+ D +SFG LWE+ +G + ++ + + +
Sbjct: 176 ILQE---RIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGG--DKPLSALDSQRKLQF 230
Query: 398 KNLRPAIPGDCPPAMAALIEQCWSLQPDKRPEFWHIVKVLEQFET 442
R +P +A LI C +PD RP F I++ L T
Sbjct: 231 YEDRHQLPAPKAAELANLINNCMDYEPDHRPSFRAIIRDLNSLFT 275
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 83/163 (50%), Gaps = 15/163 (9%)
Query: 232 EVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIAL 291
E+ +L +L++P +IK + Y ++ E + G L + + +K L
Sbjct: 204 EIEILKKLNHPCIIK-IKNFFDAEDYYIVLELMEGGEL--FDKVVGNKRLKEATCKLYFY 260
Query: 292 DIARGMEYIHSQGVIHRDLKPENVLI---DQEFHLKIADFG---IACEEVYCDALSDDPG 345
+ ++Y+H G+IHRDLKPENVL+ +++ +KI DFG I E L G
Sbjct: 261 QMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLC---G 317
Query: 346 TYRWMAPEM---IKHKSYGRKVDVYSFGLILWEMVAGTIPYEE 385
T ++APE+ + Y R VD +S G+IL+ ++G P+ E
Sbjct: 318 TPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSE 360
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 83/163 (50%), Gaps = 15/163 (9%)
Query: 232 EVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIAL 291
E+ +L +L++P +IK + Y ++ E + G L + + +K L
Sbjct: 190 EIEILKKLNHPCIIK-IKNFFDAEDYYIVLELMEGGEL--FDKVVGNKRLKEATCKLYFY 246
Query: 292 DIARGMEYIHSQGVIHRDLKPENVLI---DQEFHLKIADFG---IACEEVYCDALSDDPG 345
+ ++Y+H G+IHRDLKPENVL+ +++ +KI DFG I E L G
Sbjct: 247 QMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLC---G 303
Query: 346 TYRWMAPEM---IKHKSYGRKVDVYSFGLILWEMVAGTIPYEE 385
T ++APE+ + Y R VD +S G+IL+ ++G P+ E
Sbjct: 304 TPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSE 346
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 90/184 (48%), Gaps = 9/184 (4%)
Query: 206 AVKIIRIPDDDENETLAARLEKQFNREVALLSRLHNPNVIKFVAACKKPPVYCVITEYLS 265
AVKI+ + + L+ + RE ++ L +P++++ + + ++ E++
Sbjct: 53 AVKIVDVAKFTSSPGLST---EDLKREASICHMLKHPHIVELLETYSSDGMLYMVFEFMD 109
Query: 266 EGSLRAYLHKLEHKTLPLPKLIA--IALDIARGMEYIHSQGVIHRDLKPENVLI---DQE 320
L + K + +A I + Y H +IHRD+KP VL+ +
Sbjct: 110 GADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDNNIIHRDVKPHCVLLASKENS 169
Query: 321 FHLKIADFGIACEEVYCDALSDD-PGTYRWMAPEMIKHKSYGRKVDVYSFGLILWEMVAG 379
+K+ FG+A + ++ GT +MAPE++K + YG+ VDV+ G+IL+ +++G
Sbjct: 170 APVKLGGFGVAIQLGESGLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSG 229
Query: 380 TIPY 383
+P+
Sbjct: 230 CLPF 233
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 78/160 (48%), Gaps = 20/160 (12%)
Query: 259 VITEYLSEGSLRAYLHKLEHKTLPLPKLIAIALDIARGMEYIHSQGVIHRDLKPENVLID 318
++ +Y G L L K E K LP ++ ++ IH +HRD+KP+NVL+D
Sbjct: 167 LVMDYYVGGDLLTLLSKFEDK-LPEDMARFYIGEMVLAIDSIHQLHYVHRDIKPDNVLLD 225
Query: 319 QEFHLKIADFGIACEEVYCDALSDDP--------GTYRWMAPEMIK-----HKSYGRKVD 365
H+++ADFG C ++DD GT +++PE+++ YG + D
Sbjct: 226 VNGHIRLADFG------SCLKMNDDGTVQSSVAVGTPDYISPEILQAMEDGMGKYGPECD 279
Query: 366 VYSFGLILWEMVAGTIPYEEMNPIQAAFAVVNKNLRPAIP 405
+S G+ ++EM+ G P+ + ++ ++N R P
Sbjct: 280 WWSLGVCMYEMLYGETPFYAESLVETYGKIMNHEERFQFP 319
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 83/163 (50%), Gaps = 15/163 (9%)
Query: 232 EVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIAL 291
E+ +L +L++P +IK + Y ++ E + G L + + +K L
Sbjct: 65 EIEILKKLNHPCIIK-IKNFFDAEDYYIVLELMEGGEL--FDKVVGNKRLKEATCKLYFY 121
Query: 292 DIARGMEYIHSQGVIHRDLKPENVLI---DQEFHLKIADFG---IACEEVYCDALSDDPG 345
+ ++Y+H G+IHRDLKPENVL+ +++ +KI DFG I E L G
Sbjct: 122 QMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLC---G 178
Query: 346 TYRWMAPEM---IKHKSYGRKVDVYSFGLILWEMVAGTIPYEE 385
T ++APE+ + Y R VD +S G+IL+ ++G P+ E
Sbjct: 179 TPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSE 221
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 83/163 (50%), Gaps = 15/163 (9%)
Query: 232 EVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIAL 291
E+ +L +L++P +IK + Y ++ E + G L + + +K L
Sbjct: 64 EIEILKKLNHPCIIK-IKNFFDAEDYYIVLELMEGGEL--FDKVVGNKRLKEATCKLYFY 120
Query: 292 DIARGMEYIHSQGVIHRDLKPENVLI---DQEFHLKIADFG---IACEEVYCDALSDDPG 345
+ ++Y+H G+IHRDLKPENVL+ +++ +KI DFG I E L G
Sbjct: 121 QMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLC---G 177
Query: 346 TYRWMAPEM---IKHKSYGRKVDVYSFGLILWEMVAGTIPYEE 385
T ++APE+ + Y R VD +S G+IL+ ++G P+ E
Sbjct: 178 TPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSE 220
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 83/163 (50%), Gaps = 15/163 (9%)
Query: 232 EVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIAL 291
E+ +L +L++P +IK + Y ++ E + G L + + +K L
Sbjct: 65 EIEILKKLNHPCIIK-IKNFFDAEDYYIVLELMEGGEL--FDKVVGNKRLKEATCKLYFY 121
Query: 292 DIARGMEYIHSQGVIHRDLKPENVLI---DQEFHLKIADFG---IACEEVYCDALSDDPG 345
+ ++Y+H G+IHRDLKPENVL+ +++ +KI DFG I E L G
Sbjct: 122 QMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLC---G 178
Query: 346 TYRWMAPEM---IKHKSYGRKVDVYSFGLILWEMVAGTIPYEE 385
T ++APE+ + Y R VD +S G+IL+ ++G P+ E
Sbjct: 179 TPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSE 221
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 83/163 (50%), Gaps = 15/163 (9%)
Query: 232 EVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIAL 291
E+ +L +L++P +IK + Y ++ E + G L + + +K L
Sbjct: 65 EIEILKKLNHPCIIK-IKNFFDAEDYYIVLELMEGGEL--FDKVVGNKRLKEATCKLYFY 121
Query: 292 DIARGMEYIHSQGVIHRDLKPENVLI---DQEFHLKIADFG---IACEEVYCDALSDDPG 345
+ ++Y+H G+IHRDLKPENVL+ +++ +KI DFG I E L G
Sbjct: 122 QMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLC---G 178
Query: 346 TYRWMAPEM---IKHKSYGRKVDVYSFGLILWEMVAGTIPYEE 385
T ++APE+ + Y R VD +S G+IL+ ++G P+ E
Sbjct: 179 TPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSE 221
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 78/160 (48%), Gaps = 20/160 (12%)
Query: 259 VITEYLSEGSLRAYLHKLEHKTLPLPKLIAIALDIARGMEYIHSQGVIHRDLKPENVLID 318
++ +Y G L L K E K LP ++ ++ IH +HRD+KP+NVL+D
Sbjct: 151 LVMDYYVGGDLLTLLSKFEDK-LPEDMARFYIGEMVLAIDSIHQLHYVHRDIKPDNVLLD 209
Query: 319 QEFHLKIADFGIACEEVYCDALSDDP--------GTYRWMAPEMIK-----HKSYGRKVD 365
H+++ADFG C ++DD GT +++PE+++ YG + D
Sbjct: 210 VNGHIRLADFG------SCLKMNDDGTVQSSVAVGTPDYISPEILQAMEDGMGKYGPECD 263
Query: 366 VYSFGLILWEMVAGTIPYEEMNPIQAAFAVVNKNLRPAIP 405
+S G+ ++EM+ G P+ + ++ ++N R P
Sbjct: 264 WWSLGVCMYEMLYGETPFYAESLVETYGKIMNHEERFQFP 303
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 83/163 (50%), Gaps = 15/163 (9%)
Query: 232 EVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIAL 291
E+ +L +L++P +IK + Y ++ E + G L + + +K L
Sbjct: 71 EIEILKKLNHPCIIK-IKNFFDAEDYYIVLELMEGGEL--FDKVVGNKRLKEATCKLYFY 127
Query: 292 DIARGMEYIHSQGVIHRDLKPENVLI---DQEFHLKIADFG---IACEEVYCDALSDDPG 345
+ ++Y+H G+IHRDLKPENVL+ +++ +KI DFG I E L G
Sbjct: 128 QMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLC---G 184
Query: 346 TYRWMAPEM---IKHKSYGRKVDVYSFGLILWEMVAGTIPYEE 385
T ++APE+ + Y R VD +S G+IL+ ++G P+ E
Sbjct: 185 TPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSE 227
>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex
With An Indirubin Ligand
Length = 429
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/186 (31%), Positives = 90/186 (48%), Gaps = 26/186 (13%)
Query: 205 VAVKIIRIPDDDENETLAARLEKQFNREVALLSRL------HNPNVIKFVAACKKPPVYC 258
VA+K++R NE R +Q E+ +L L + NVI + C
Sbjct: 125 VALKMVR------NEK---RFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRNHIC 175
Query: 259 VITEYLSEGSLRAYLHKLEHKTLPLPKLIAIALDIARGMEYIHSQGVIHRDLKPENVLID 318
+ E LS +L + K + + LP + A I + ++ +H +IH DLKPEN+L+
Sbjct: 176 MTFELLSM-NLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHKNRIIHCDLKPENILLK 234
Query: 319 QEFH--LKIADFGIACEE---VYCDALSDDPGTYRWMAPEMIKHKSYGRKVDVYSFGLIL 373
Q+ +K+ DFG +C E VY S YR APE+I YG +D++S G IL
Sbjct: 235 QQGRSGIKVIDFGSSCYEHQRVYTXIQSR---FYR--APEVILGARYGMPIDMWSLGCIL 289
Query: 374 WEMVAG 379
E++ G
Sbjct: 290 AELLTG 295
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 81/157 (51%), Gaps = 14/157 (8%)
Query: 259 VITEYLSEGSLRAYLHKLEHKTLPLPKLIA--IALDIARGMEYIHSQGVIHRDLKPENVL 316
++ +Y G L L K E + LP+ +A ++ ++ +H +HRD+KP+N+L
Sbjct: 151 LVMDYYVGGDLLTLLSKFEDR---LPEEMARFYLAEMVIAIDSVHQLHYVHRDIKPDNIL 207
Query: 317 IDQEFHLKIADFGIACEEVYCDALSDDP---GTYRWMAPEMIK-----HKSYGRKVDVYS 368
+D H+++ADFG +C ++ D GT +++PE+++ YG + D +S
Sbjct: 208 MDMNGHIRLADFG-SCLKLMEDGTVQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWS 266
Query: 369 FGLILWEMVAGTIPYEEMNPIQAAFAVVNKNLRPAIP 405
G+ ++EM+ G P+ + ++ ++N R P
Sbjct: 267 LGVCMYEMLYGETPFYAESLVETYGKIMNHKERFQFP 303
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 37/154 (24%), Positives = 84/154 (54%), Gaps = 3/154 (1%)
Query: 232 EVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIAL 291
E++++++LH+P +I A + +I E+LS G L + ++K + ++I
Sbjct: 98 EISIMNQLHHPKLINLHDAFEDKYEMVLILEFLSGGELFDRIAAEDYK-MSEAEVINYMR 156
Query: 292 DIARGMEYIHSQGVIHRDLKPENVLID--QEFHLKIADFGIACEEVYCDALSDDPGTYRW 349
G++++H ++H D+KPEN++ + + +KI DFG+A + + + T +
Sbjct: 157 QACEGLKHMHEHSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIVKVTTATAEF 216
Query: 350 MAPEMIKHKSYGRKVDVYSFGLILWEMVAGTIPY 383
APE++ + G D+++ G++ + +++G P+
Sbjct: 217 AAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPF 250
>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41
Length = 417
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/186 (31%), Positives = 90/186 (48%), Gaps = 26/186 (13%)
Query: 205 VAVKIIRIPDDDENETLAARLEKQFNREVALLSRL------HNPNVIKFVAACKKPPVYC 258
VA+K++R NE R +Q E+ +L L + NVI + C
Sbjct: 125 VALKMVR------NEK---RFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRNHIC 175
Query: 259 VITEYLSEGSLRAYLHKLEHKTLPLPKLIAIALDIARGMEYIHSQGVIHRDLKPENVLID 318
+ E LS +L + K + + LP + A I + ++ +H +IH DLKPEN+L+
Sbjct: 176 MTFELLSM-NLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHKNRIIHCDLKPENILLK 234
Query: 319 QEFH--LKIADFGIACEE---VYCDALSDDPGTYRWMAPEMIKHKSYGRKVDVYSFGLIL 373
Q+ +K+ DFG +C E VY S YR APE+I YG +D++S G IL
Sbjct: 235 QQGRSGIKVIDFGSSCYEHQRVYTXIQSR---FYR--APEVILGARYGMPIDMWSLGCIL 289
Query: 374 WEMVAG 379
E++ G
Sbjct: 290 AELLTG 295
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 71/128 (55%), Gaps = 4/128 (3%)
Query: 259 VITEYLSEGSLRAYLHKLEHKTLPLPKLIAIALDIARGMEYIHSQGVIHRDLKPENVLI- 317
+I E + G L + + + + + I DI ++++HS + HRD+KPEN+L
Sbjct: 84 IIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSHNIAHRDVKPENLLYT 143
Query: 318 --DQEFHLKIADFGIACEEVYCDALSDDPGTYRWMAPEMIKHKSYGRKVDVYSFGLILWE 375
+++ LK+ DFG A +E +AL T ++APE++ + Y + D++S G+I++
Sbjct: 144 SKEKDAVLKLTDFGFA-KETTQNALQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYI 202
Query: 376 MVAGTIPY 383
++ G P+
Sbjct: 203 LLCGFPPF 210
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 71/128 (55%), Gaps = 4/128 (3%)
Query: 259 VITEYLSEGSLRAYLHKLEHKTLPLPKLIAIALDIARGMEYIHSQGVIHRDLKPENVLI- 317
+I E + G L + + + + + I DI ++++HS + HRD+KPEN+L
Sbjct: 103 IIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSHNIAHRDVKPENLLYT 162
Query: 318 --DQEFHLKIADFGIACEEVYCDALSDDPGTYRWMAPEMIKHKSYGRKVDVYSFGLILWE 375
+++ LK+ DFG A +E +AL T ++APE++ + Y + D++S G+I++
Sbjct: 163 SKEKDAVLKLTDFGFA-KETTQNALQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYI 221
Query: 376 MVAGTIPY 383
++ G P+
Sbjct: 222 LLCGFPPF 229
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 53/98 (54%), Gaps = 1/98 (1%)
Query: 280 TLPLPKLIAIALDIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIACEEVYCDA 339
+LP ++ D + ++HSQG++H D+KP N+ + K+ DFG+ E A
Sbjct: 153 SLPEAQVWGYLRDTLLALAHLHSQGLVHLDVKPANIFLGPRGRCKLGDFGLLVELGTAGA 212
Query: 340 LSDDPGTYRWMAPEMIKHKSYGRKVDVYSFGLILWEMV 377
G R+MAPE+++ SYG DV+S GL + E+
Sbjct: 213 GEVQEGDPRYMAPELLQ-GSYGTAADVFSLGLTILEVA 249
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 35/88 (39%), Positives = 54/88 (61%), Gaps = 3/88 (3%)
Query: 293 IARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIACEEVYCDALSDDPGTYRWMAP 352
I RG++YIHS +IHRDLKP N+ ++++ LKI FG+A D ++ T + AP
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILGFGLARHT--DDEMTGYVATRWYRAP 191
Query: 353 E-MIKHKSYGRKVDVYSFGLILWEMVAG 379
E M+ Y + VD++S G I+ E++ G
Sbjct: 192 EIMLNWMHYNQTVDIWSVGCIMAELLTG 219
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 66/262 (25%), Positives = 121/262 (46%), Gaps = 32/262 (12%)
Query: 186 RFAHGAHSRLYHGIYKDEPV-AVKIIRIPDDDENETLAARLEKQFNREVALLSRL--HNP 242
+ G S+++ + + + + A+K + + + D N+TL + + E+A L++L H+
Sbjct: 63 QIGSGGSSKVFQVLNEKKQIYAIKYVNLEEAD-NQTLDS-----YRNEIAYLNKLQQHSD 116
Query: 243 NVIK-FVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIALDIARGMEYIH 301
+I+ + +Y V+ L ++L K K++ + + ++ + IH
Sbjct: 117 KIIRLYDYEITDQYIYMVME--CGNIDLNSWLKK--KKSIDPWERKSYWKNMLEAVHTIH 172
Query: 302 SQGVIHRDLKPENVLIDQEFHLKIADFGIACEEVYCDALS----DDPGTYRWMAPEMIKH 357
G++H DLKP N LI + LK+ DFGIA ++ D S GT +M PE IK
Sbjct: 173 QHGIVHSDLKPANFLI-VDGMLKLIDFGIA-NQMQPDTTSVVKDSQVGTVNYMPPEAIKD 230
Query: 358 KSYGRK-----------VDVYSFGLILWEMVAGTIPYEE-MNPIQAAFAVVNKNLRPAIP 405
S R+ DV+S G IL+ M G P+++ +N I A+++ N P
Sbjct: 231 MSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFP 290
Query: 406 GDCPPAMAALIEQCWSLQPDKR 427
+ +++ C P +R
Sbjct: 291 DIPEKDLQDVLKCCLKRDPKQR 312
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 66/262 (25%), Positives = 121/262 (46%), Gaps = 32/262 (12%)
Query: 186 RFAHGAHSRLYHGIYKDEPV-AVKIIRIPDDDENETLAARLEKQFNREVALLSRL--HNP 242
+ G S+++ + + + + A+K + + + D N+TL + + E+A L++L H+
Sbjct: 16 QIGSGGSSKVFQVLNEKKQIYAIKYVNLEEAD-NQTLDS-----YRNEIAYLNKLQQHSD 69
Query: 243 NVIK-FVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIALDIARGMEYIH 301
+I+ + +Y V+ L ++L K K++ + + ++ + IH
Sbjct: 70 KIIRLYDYEITDQYIYMVME--CGNIDLNSWLKK--KKSIDPWERKSYWKNMLEAVHTIH 125
Query: 302 SQGVIHRDLKPENVLIDQEFHLKIADFGIACEEVYCDALS----DDPGTYRWMAPEMIKH 357
G++H DLKP N LI + LK+ DFGIA ++ D S GT +M PE IK
Sbjct: 126 QHGIVHSDLKPANFLI-VDGMLKLIDFGIA-NQMQPDTTSVVKDSQVGTVNYMPPEAIKD 183
Query: 358 KSYGRK-----------VDVYSFGLILWEMVAGTIPYEE-MNPIQAAFAVVNKNLRPAIP 405
S R+ DV+S G IL+ M G P+++ +N I A+++ N P
Sbjct: 184 MSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFP 243
Query: 406 GDCPPAMAALIEQCWSLQPDKR 427
+ +++ C P +R
Sbjct: 244 DIPEKDLQDVLKCCLKRDPKQR 265
>pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2)
Length = 429
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 59/186 (31%), Positives = 90/186 (48%), Gaps = 26/186 (13%)
Query: 205 VAVKIIRIPDDDENETLAARLEKQFNREVALLSRL------HNPNVIKFVAACKKPPVYC 258
VA+K++R NE R +Q E+ +L L + NVI + C
Sbjct: 125 VALKMVR------NEK---RFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRNHIC 175
Query: 259 VITEYLSEGSLRAYLHKLEHKTLPLPKLIAIALDIARGMEYIHSQGVIHRDLKPENVLID 318
+ E LS +L + K + + LP + A I + ++ +H +IH DLKPEN+L+
Sbjct: 176 MTFELLSM-NLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHKNRIIHCDLKPENILLK 234
Query: 319 QEFH--LKIADFGIACEE---VYCDALSDDPGTYRWMAPEMIKHKSYGRKVDVYSFGLIL 373
Q+ +K+ DFG +C E VY S YR APE+I YG +D++S G IL
Sbjct: 235 QQGRSGIKVIDFGSSCYEHQRVYXXIQSR---FYR--APEVILGARYGMPIDMWSLGCIL 289
Query: 374 WEMVAG 379
E++ G
Sbjct: 290 AELLTG 295
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 66/262 (25%), Positives = 121/262 (46%), Gaps = 32/262 (12%)
Query: 186 RFAHGAHSRLYHGIYKDEPV-AVKIIRIPDDDENETLAARLEKQFNREVALLSRL--HNP 242
+ G S+++ + + + + A+K + + + D N+TL + + E+A L++L H+
Sbjct: 63 QIGSGGSSKVFQVLNEKKQIYAIKYVNLEEAD-NQTLDS-----YRNEIAYLNKLQQHSD 116
Query: 243 NVIK-FVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIALDIARGMEYIH 301
+I+ + +Y V+ L ++L K K++ + + ++ + IH
Sbjct: 117 KIIRLYDYEITDQYIYMVME--CGNIDLNSWLKK--KKSIDPWERKSYWKNMLEAVHTIH 172
Query: 302 SQGVIHRDLKPENVLIDQEFHLKIADFGIACEEVYCDALS----DDPGTYRWMAPEMIKH 357
G++H DLKP N LI + LK+ DFGIA ++ D S GT +M PE IK
Sbjct: 173 QHGIVHSDLKPANFLI-VDGMLKLIDFGIA-NQMQPDTTSVVKDSQVGTVNYMPPEAIKD 230
Query: 358 KSYGRK-----------VDVYSFGLILWEMVAGTIPYEE-MNPIQAAFAVVNKNLRPAIP 405
S R+ DV+S G IL+ M G P+++ +N I A+++ N P
Sbjct: 231 MSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFP 290
Query: 406 GDCPPAMAALIEQCWSLQPDKR 427
+ +++ C P +R
Sbjct: 291 DIPEKDLQDVLKCCLKRDPKQR 312
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 66/262 (25%), Positives = 121/262 (46%), Gaps = 32/262 (12%)
Query: 186 RFAHGAHSRLYHGIYKDEPV-AVKIIRIPDDDENETLAARLEKQFNREVALLSRL--HNP 242
+ G S+++ + + + + A+K + + + D N+TL + + E+A L++L H+
Sbjct: 35 QIGSGGSSKVFQVLNEKKQIYAIKYVNLEEAD-NQTLDS-----YRNEIAYLNKLQQHSD 88
Query: 243 NVIK-FVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIALDIARGMEYIH 301
+I+ + +Y V+ L ++L K K++ + + ++ + IH
Sbjct: 89 KIIRLYDYEITDQYIYMVME--CGNIDLNSWLKK--KKSIDPWERKSYWKNMLEAVHTIH 144
Query: 302 SQGVIHRDLKPENVLIDQEFHLKIADFGIACEEVYCDALS----DDPGTYRWMAPEMIKH 357
G++H DLKP N LI + LK+ DFGIA ++ D S GT +M PE IK
Sbjct: 145 QHGIVHSDLKPANFLI-VDGMLKLIDFGIA-NQMQPDTTSVVKDSQVGTVNYMPPEAIKD 202
Query: 358 KSYGRK-----------VDVYSFGLILWEMVAGTIPYEE-MNPIQAAFAVVNKNLRPAIP 405
S R+ DV+S G IL+ M G P+++ +N I A+++ N P
Sbjct: 203 MSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFP 262
Query: 406 GDCPPAMAALIEQCWSLQPDKR 427
+ +++ C P +R
Sbjct: 263 DIPEKDLQDVLKCCLKRDPKQR 284
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 35/88 (39%), Positives = 54/88 (61%), Gaps = 3/88 (3%)
Query: 293 IARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIACEEVYCDALSDDPGTYRWMAP 352
I RG++YIHS +IHRDLKP N+ ++++ LKI D G+A D ++ T + AP
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDAGLARHT--DDEMTGYVATRWYRAP 191
Query: 353 E-MIKHKSYGRKVDVYSFGLILWEMVAG 379
E M+ Y + VD++S G I+ E++ G
Sbjct: 192 EIMLNWMHYNQTVDIWSVGCIMAELLTG 219
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 35/88 (39%), Positives = 54/88 (61%), Gaps = 3/88 (3%)
Query: 293 IARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIACEEVYCDALSDDPGTYRWMAP 352
I RG++YIHS +IHRDLKP N+ ++++ LKI DF +A D ++ T + AP
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFYLARHT--DDEMTGYVATRWYRAP 191
Query: 353 E-MIKHKSYGRKVDVYSFGLILWEMVAG 379
E M+ Y + VD++S G I+ E++ G
Sbjct: 192 EIMLNWMHYNQTVDIWSVGCIMAELLTG 219
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 35/88 (39%), Positives = 54/88 (61%), Gaps = 3/88 (3%)
Query: 293 IARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIACEEVYCDALSDDPGTYRWMAP 352
I RG++YIHS +IHRDLKP N+ ++++ LKI D G+A D ++ T + AP
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDRGLARHT--DDEMTGYVATRWYRAP 191
Query: 353 E-MIKHKSYGRKVDVYSFGLILWEMVAG 379
E M+ Y + VD++S G I+ E++ G
Sbjct: 192 EIMLNWMHYNQTVDIWSVGCIMAELLTG 219
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 35/88 (39%), Positives = 54/88 (61%), Gaps = 3/88 (3%)
Query: 293 IARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIACEEVYCDALSDDPGTYRWMAP 352
I RG++YIHS +IHRDLKP N+ ++++ LKI D G+A D ++ T + AP
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDGGLARHT--DDEMTGYVATRWYRAP 191
Query: 353 E-MIKHKSYGRKVDVYSFGLILWEMVAG 379
E M+ Y + VD++S G I+ E++ G
Sbjct: 192 EIMLNWMHYNQTVDIWSVGCIMAELLTG 219
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 92/187 (49%), Gaps = 11/187 (5%)
Query: 208 KIIRIPDDDENETLAARLEK---QFNREVALLSRLHN-PNVIKFVAACKK----PPVYCV 259
K+++I + E A ++ + + REV L R P++++ V + +
Sbjct: 31 KVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLI 90
Query: 260 ITEYLSEGSLRAYLHKLEHKTLPLPKLIAIALDIARGMEYIHSQGVIHRDLKPENVLIDQ 319
+ E L G L + + + + I I ++Y+HS + HRD+KPEN+L
Sbjct: 91 VMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTS 150
Query: 320 E---FHLKIADFGIACEEVYCDALSDDPGTYRWMAPEMIKHKSYGRKVDVYSFGLILWEM 376
+ LK+ DFG A E ++L++ T ++APE++ + Y + D++S G+I++ +
Sbjct: 151 KRPNAILKLTDFGFAKETTSHNSLTEPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYIL 210
Query: 377 VAGTIPY 383
+ G P+
Sbjct: 211 LCGYPPF 217
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 66/262 (25%), Positives = 121/262 (46%), Gaps = 32/262 (12%)
Query: 186 RFAHGAHSRLYHGIYKDEPV-AVKIIRIPDDDENETLAARLEKQFNREVALLSRL--HNP 242
+ G S+++ + + + + A+K + + + D N+TL + + E+A L++L H+
Sbjct: 15 QIGSGGSSKVFQVLNEKKQIYAIKYVNLEEAD-NQTLDS-----YRNEIAYLNKLQQHSD 68
Query: 243 NVIK-FVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIALDIARGMEYIH 301
+I+ + +Y V+ L ++L K K++ + + ++ + IH
Sbjct: 69 KIIRLYDYEITDQYIYMVME--CGNIDLNSWLKK--KKSIDPWERKSYWKNMLEAVHTIH 124
Query: 302 SQGVIHRDLKPENVLIDQEFHLKIADFGIACEEVYCDALS----DDPGTYRWMAPEMIKH 357
G++H DLKP N LI + LK+ DFGIA ++ D S GT +M PE IK
Sbjct: 125 QHGIVHSDLKPANFLI-VDGMLKLIDFGIA-NQMQPDTTSVVKDSQVGTVNYMPPEAIKD 182
Query: 358 KSYGRK-----------VDVYSFGLILWEMVAGTIPYEE-MNPIQAAFAVVNKNLRPAIP 405
S R+ DV+S G IL+ M G P+++ +N I A+++ N P
Sbjct: 183 MSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFP 242
Query: 406 GDCPPAMAALIEQCWSLQPDKR 427
+ +++ C P +R
Sbjct: 243 DIPEKDLQDVLKCCLKRDPKQR 264
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 66/262 (25%), Positives = 121/262 (46%), Gaps = 32/262 (12%)
Query: 186 RFAHGAHSRLYHGIYKDEPV-AVKIIRIPDDDENETLAARLEKQFNREVALLSRL--HNP 242
+ G S+++ + + + + A+K + + + D N+TL + + E+A L++L H+
Sbjct: 19 QIGSGGSSKVFQVLNEKKQIYAIKYVNLEEAD-NQTLDS-----YRNEIAYLNKLQQHSD 72
Query: 243 NVIK-FVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIALDIARGMEYIH 301
+I+ + +Y V+ L ++L K K++ + + ++ + IH
Sbjct: 73 KIIRLYDYEITDQYIYMVME--CGNIDLNSWLKK--KKSIDPWERKSYWKNMLEAVHTIH 128
Query: 302 SQGVIHRDLKPENVLIDQEFHLKIADFGIACEEVYCDALS----DDPGTYRWMAPEMIKH 357
G++H DLKP N LI + LK+ DFGIA ++ D S GT +M PE IK
Sbjct: 129 QHGIVHSDLKPANFLI-VDGMLKLIDFGIA-NQMQPDTTSVVKDSQVGTVNYMPPEAIKD 186
Query: 358 KSYGRK-----------VDVYSFGLILWEMVAGTIPYEE-MNPIQAAFAVVNKNLRPAIP 405
S R+ DV+S G IL+ M G P+++ +N I A+++ N P
Sbjct: 187 MSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFP 246
Query: 406 GDCPPAMAALIEQCWSLQPDKR 427
+ +++ C P +R
Sbjct: 247 DIPEKDLQDVLKCCLKRDPKQR 268
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 91/187 (48%), Gaps = 11/187 (5%)
Query: 208 KIIRIPDDDENETLAARLEK---QFNREVALLSRLHN-PNVIKFVAACKK----PPVYCV 259
K+++I + E A ++ + + REV L R P++++ V + +
Sbjct: 47 KVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLI 106
Query: 260 ITEYLSEGSLRAYLHKLEHKTLPLPKLIAIALDIARGMEYIHSQGVIHRDLKPENVLIDQ 319
+ E L G L + + + + I I ++Y+HS + HRD+KPEN+L
Sbjct: 107 VMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTS 166
Query: 320 E---FHLKIADFGIACEEVYCDALSDDPGTYRWMAPEMIKHKSYGRKVDVYSFGLILWEM 376
+ LK+ DFG A E ++L+ T ++APE++ + Y + D++S G+I++ +
Sbjct: 167 KRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYIL 226
Query: 377 VAGTIPY 383
+ G P+
Sbjct: 227 LCGYPPF 233
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 91/187 (48%), Gaps = 11/187 (5%)
Query: 208 KIIRIPDDDENETLAARLEK---QFNREVALLSRLHN-PNVIKFVAACKK----PPVYCV 259
K+++I + E A ++ + + REV L R P++++ V + +
Sbjct: 39 KVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLI 98
Query: 260 ITEYLSEGSLRAYLHKLEHKTLPLPKLIAIALDIARGMEYIHSQGVIHRDLKPENVLIDQ 319
+ E L G L + + + + I I ++Y+HS + HRD+KPEN+L
Sbjct: 99 VMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTS 158
Query: 320 E---FHLKIADFGIACEEVYCDALSDDPGTYRWMAPEMIKHKSYGRKVDVYSFGLILWEM 376
+ LK+ DFG A E ++L+ T ++APE++ + Y + D++S G+I++ +
Sbjct: 159 KRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYIL 218
Query: 377 VAGTIPY 383
+ G P+
Sbjct: 219 LCGYPPF 225
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/261 (24%), Positives = 119/261 (45%), Gaps = 30/261 (11%)
Query: 186 RFAHGAHSRLYHGIYKDEPV-AVKIIRIPDDDENETLAARLEKQFNREVALLSRL--HNP 242
+ G S+++ + + + + A+K + + + D N+TL + + E+A L++L H+
Sbjct: 35 QIGSGGSSKVFQVLNEKKQIYAIKYVNLEEAD-NQTLDS-----YRNEIAYLNKLQQHSD 88
Query: 243 NVIK-FVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIALDIARGMEYIH 301
+I+ + +Y V+ L ++L K K++ + + ++ + IH
Sbjct: 89 KIIRLYDYEITDQYIYMVME--CGNIDLNSWLKK--KKSIDPWERKSYWKNMLEAVHTIH 144
Query: 302 SQGVIHRDLKPENVLIDQEFHLKIADFGIACE---EVYCDALSDDPGTYRWMAPEMIKHK 358
G++H DLKP N LI + LK+ DFGIA + + GT +M PE IK
Sbjct: 145 QHGIVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDXXXVVKDSQVGTVNYMPPEAIKDM 203
Query: 359 SYGRK-----------VDVYSFGLILWEMVAGTIPYEE-MNPIQAAFAVVNKNLRPAIPG 406
S R+ DV+S G IL+ M G P+++ +N I A+++ N P
Sbjct: 204 SSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPD 263
Query: 407 DCPPAMAALIEQCWSLQPDKR 427
+ +++ C P +R
Sbjct: 264 IPEKDLQDVLKCCLKRDPKQR 284
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 91/187 (48%), Gaps = 11/187 (5%)
Query: 208 KIIRIPDDDENETLAARLEK---QFNREVALLSRLHN-PNVIKFVAACKK----PPVYCV 259
K+++I + E A ++ + + REV L R P++++ V + +
Sbjct: 38 KVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLI 97
Query: 260 ITEYLSEGSLRAYLHKLEHKTLPLPKLIAIALDIARGMEYIHSQGVIHRDLKPENVLIDQ 319
+ E L G L + + + + I I ++Y+HS + HRD+KPEN+L
Sbjct: 98 VMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTS 157
Query: 320 E---FHLKIADFGIACEEVYCDALSDDPGTYRWMAPEMIKHKSYGRKVDVYSFGLILWEM 376
+ LK+ DFG A E ++L+ T ++APE++ + Y + D++S G+I++ +
Sbjct: 158 KRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYIL 217
Query: 377 VAGTIPY 383
+ G P+
Sbjct: 218 LCGYPPF 224
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 91/187 (48%), Gaps = 11/187 (5%)
Query: 208 KIIRIPDDDENETLAARLEK---QFNREVALLSRLHN-PNVIKFVAACKK----PPVYCV 259
K+++I + E A ++ + + REV L R P++++ V + +
Sbjct: 37 KVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLI 96
Query: 260 ITEYLSEGSLRAYLHKLEHKTLPLPKLIAIALDIARGMEYIHSQGVIHRDLKPENVLIDQ 319
+ E L G L + + + + I I ++Y+HS + HRD+KPEN+L
Sbjct: 97 VMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTS 156
Query: 320 E---FHLKIADFGIACEEVYCDALSDDPGTYRWMAPEMIKHKSYGRKVDVYSFGLILWEM 376
+ LK+ DFG A E ++L+ T ++APE++ + Y + D++S G+I++ +
Sbjct: 157 KRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYIL 216
Query: 377 VAGTIPY 383
+ G P+
Sbjct: 217 LCGYPPF 223
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 98/211 (46%), Gaps = 25/211 (11%)
Query: 203 EPVAVKIIRIPDDDENETLAARLEKQFNREVALLSRLHNPNVIKFVAACK---KPPVYCV 259
+ VA+K + + ++ E + A RE+ +L L + NV+ + C+ P C
Sbjct: 44 QKVALKKVLMENEKEGFPITAL------REIKILQLLKHENVVNLIEICRTKASPYNRCK 97
Query: 260 ITEYL----SEGSLRAYLHKLEHKTLPLPKLIAIALDIARGMEYIHSQGVIHRDLKPENV 315
+ YL E L L + K L ++ + + G+ YIH ++HRD+K NV
Sbjct: 98 ASIYLVFDFCEHDLAGLLSNVLVK-FTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANV 156
Query: 316 LIDQEFHLKIADFGIACEEVYCDALSDDPGTYR------WMAPE--MIKHKSYGRKVDVY 367
LI ++ LK+ADFG+A + A + P Y W P ++ + YG +D++
Sbjct: 157 LITRDGVLKLADFGLA--RAFSLAKNSQPNRYXNRVVTLWYRPPELLLGERDYGPPIDLW 214
Query: 368 SFGLILWEMVAGTIPYEEMNPIQAAFAVVNK 398
G I+ EM + P + N Q A++++
Sbjct: 215 GAGCIMAEMWTRS-PIMQGNTEQHQLALISQ 244
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.320 0.136 0.417
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,096,345
Number of Sequences: 62578
Number of extensions: 575370
Number of successful extensions: 4177
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 1101
Number of HSP's successfully gapped in prelim test: 12
Number of HSP's that attempted gapping in prelim test: 1196
Number of HSP's gapped (non-prelim): 1123
length of query: 488
length of database: 14,973,337
effective HSP length: 103
effective length of query: 385
effective length of database: 8,527,803
effective search space: 3283204155
effective search space used: 3283204155
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 53 (25.0 bits)