Query 011360
Match_columns 487
No_of_seqs 431 out of 2555
Neff 9.4
Searched_HMMs 46136
Date Fri Mar 29 00:29:17 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/011360.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/011360hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0581 Mitogen-activated prot 100.0 2.1E-50 4.5E-55 376.0 19.8 254 193-481 80-334 (364)
2 KOG0595 Serine/threonine-prote 100.0 2E-48 4.4E-53 365.6 21.2 249 192-478 10-264 (429)
3 KOG0192 Tyrosine kinase specif 100.0 4.4E-48 9.5E-53 377.9 23.8 256 193-486 42-303 (362)
4 KOG0575 Polo-like serine/threo 100.0 4E-48 8.8E-53 380.6 21.8 251 192-481 18-268 (592)
5 KOG0197 Tyrosine kinases [Sign 100.0 7.9E-49 1.7E-53 381.8 16.1 358 89-486 77-461 (468)
6 KOG0591 NIMA (never in mitosis 100.0 5.3E-49 1.2E-53 351.8 13.0 259 193-482 20-281 (375)
7 KOG1187 Serine/threonine prote 100.0 1.9E-47 4.1E-52 376.0 25.0 277 188-486 71-352 (361)
8 KOG0194 Protein tyrosine kinas 100.0 5E-49 1.1E-53 389.3 13.6 357 93-486 49-420 (474)
9 KOG0615 Serine/threonine prote 100.0 6.6E-49 1.4E-53 368.4 12.6 261 190-481 170-436 (475)
10 KOG0598 Ribosomal protein S6 k 100.0 3.3E-47 7.2E-52 354.5 18.6 245 192-474 25-269 (357)
11 KOG0582 Ste20-like serine/thre 100.0 3.9E-45 8.5E-50 346.2 23.7 266 189-481 23-292 (516)
12 KOG0593 Predicted protein kina 100.0 5.5E-46 1.2E-50 335.6 13.0 265 193-481 3-283 (396)
13 KOG0592 3-phosphoinositide-dep 100.0 7.4E-45 1.6E-49 351.9 20.0 255 190-481 71-337 (604)
14 KOG0661 MAPK related serine/th 100.0 4E-45 8.8E-50 348.6 15.0 264 191-481 9-290 (538)
15 KOG0198 MEKK and related serin 100.0 3.3E-44 7.1E-49 340.3 18.3 254 193-482 18-276 (313)
16 KOG1026 Nerve growth factor re 100.0 1.3E-44 2.8E-49 369.0 16.5 262 192-486 486-762 (774)
17 KOG0616 cAMP-dependent protein 100.0 2.3E-43 5E-48 318.0 19.8 239 193-473 45-283 (355)
18 KOG0578 p21-activated serine/t 100.0 3.7E-44 8E-49 349.9 15.8 251 191-481 272-522 (550)
19 KOG0583 Serine/threonine prote 100.0 3E-43 6.4E-48 347.1 22.3 254 191-480 16-273 (370)
20 KOG0600 Cdc2-related protein k 100.0 5.2E-44 1.1E-48 343.4 16.3 264 190-481 115-399 (560)
21 cd05102 PTKc_VEGFR3 Catalytic 100.0 2.9E-43 6.4E-48 348.8 22.3 266 190-487 5-335 (338)
22 KOG0605 NDR and related serine 100.0 1.3E-43 2.9E-48 343.5 18.8 256 191-480 140-443 (550)
23 KOG0597 Serine-threonine prote 100.0 1.5E-43 3.3E-48 343.2 17.1 249 192-481 2-250 (808)
24 KOG0193 Serine/threonine prote 100.0 1E-43 2.2E-48 348.0 14.6 266 186-487 386-654 (678)
25 KOG0659 Cdk activating kinase 100.0 1.1E-42 2.3E-47 309.4 17.9 264 192-481 2-280 (318)
26 KOG4721 Serine/threonine prote 100.0 6.6E-44 1.4E-48 345.5 10.8 249 187-485 119-367 (904)
27 KOG0611 Predicted serine/threo 100.0 6.1E-43 1.3E-47 326.7 16.6 249 192-481 53-302 (668)
28 KOG0585 Ca2+/calmodulin-depend 100.0 1.5E-42 3.3E-47 330.6 17.2 267 190-481 95-371 (576)
29 KOG1095 Protein tyrosine kinas 100.0 2.2E-42 4.7E-47 364.9 19.5 263 192-487 692-962 (1025)
30 KOG0694 Serine/threonine prote 100.0 2.9E-42 6.2E-47 343.1 19.2 247 190-476 366-613 (694)
31 KOG0588 Serine/threonine prote 100.0 2.4E-42 5.2E-47 341.1 17.9 249 193-481 13-262 (786)
32 KOG0201 Serine/threonine prote 100.0 2.8E-43 6E-48 333.5 10.4 250 192-481 13-262 (467)
33 KOG0580 Serine/threonine prote 100.0 6.9E-42 1.5E-46 299.9 17.6 251 192-481 22-272 (281)
34 KOG0610 Putative serine/threon 100.0 1.1E-41 2.3E-46 320.3 20.0 256 192-480 77-390 (459)
35 cd05096 PTKc_DDR1 Catalytic do 100.0 3E-41 6.6E-46 329.3 23.9 266 192-485 5-304 (304)
36 cd05104 PTKc_Kit Catalytic dom 100.0 1.4E-41 3E-46 341.0 21.9 265 191-487 34-375 (375)
37 cd05106 PTKc_CSF-1R Catalytic 100.0 1.3E-41 2.9E-46 340.8 21.3 265 191-487 37-373 (374)
38 PHA02988 hypothetical protein; 100.0 3E-41 6.5E-46 325.8 23.0 248 198-486 26-279 (283)
39 KOG2345 Serine/threonine prote 100.0 4.1E-42 9E-47 302.6 14.5 265 190-487 19-301 (302)
40 KOG0663 Protein kinase PITSLRE 100.0 4.5E-42 9.7E-47 314.3 15.0 261 192-481 76-360 (419)
41 KOG0589 Serine/threonine prote 100.0 4.1E-42 9E-47 333.9 15.3 254 192-482 4-258 (426)
42 cd06649 PKc_MEK2 Catalytic dom 100.0 1.3E-40 2.8E-45 328.7 26.2 201 191-416 4-204 (331)
43 cd05064 PTKc_EphR_A10 Catalyti 100.0 9.2E-41 2E-45 319.5 23.4 259 192-487 5-266 (266)
44 cd05612 STKc_PRKX_like Catalyt 100.0 6.7E-41 1.4E-45 324.8 22.0 247 193-481 2-253 (291)
45 cd05571 STKc_PKB Catalytic dom 100.0 7.5E-41 1.6E-45 329.3 21.7 245 198-481 1-250 (323)
46 PTZ00267 NIMA-related protein 100.0 1.3E-40 2.8E-45 343.9 24.5 255 193-481 68-322 (478)
47 cd07848 STKc_CDKL5 Catalytic d 100.0 1.2E-40 2.5E-45 322.4 21.9 267 193-481 2-283 (287)
48 cd05631 STKc_GRK4 Catalytic do 100.0 1.2E-40 2.7E-45 322.0 22.0 254 194-481 2-260 (285)
49 PTZ00426 cAMP-dependent protei 100.0 8.9E-41 1.9E-45 330.5 21.3 249 192-481 30-283 (340)
50 KOG0660 Mitogen-activated prot 100.0 4.5E-41 9.7E-46 312.3 17.7 262 193-481 23-309 (359)
51 PTZ00263 protein kinase A cata 100.0 1.2E-40 2.7E-45 328.5 21.7 247 192-480 18-269 (329)
52 cd05600 STKc_Sid2p_Dbf2p Catal 100.0 1.1E-40 2.4E-45 329.6 21.5 255 193-481 2-256 (333)
53 PF07714 Pkinase_Tyr: Protein 100.0 7.9E-41 1.7E-45 318.7 18.1 254 195-483 2-259 (259)
54 cd05585 STKc_YPK1_like Catalyt 100.0 1.7E-40 3.6E-45 325.2 20.8 241 200-479 1-241 (312)
55 KOG0599 Phosphorylase kinase g 100.0 1.8E-41 3.8E-46 302.2 12.5 259 192-481 17-282 (411)
56 cd05105 PTKc_PDGFR_alpha Catal 100.0 3.6E-40 7.8E-45 332.0 23.8 269 187-487 32-398 (400)
57 cd05048 PTKc_Ror Catalytic Dom 100.0 7E-40 1.5E-44 316.2 24.5 261 193-486 6-283 (283)
58 PHA03212 serine/threonine kina 100.0 4.9E-40 1.1E-44 330.8 24.1 260 191-481 91-375 (391)
59 KOG4278 Protein tyrosine kinas 100.0 8.3E-41 1.8E-45 326.7 17.7 262 187-487 262-524 (1157)
60 PTZ00283 serine/threonine prot 100.0 4.2E-40 9.2E-45 340.4 24.1 257 192-481 32-296 (496)
61 cd06650 PKc_MEK1 Catalytic dom 100.0 9.7E-40 2.1E-44 322.6 25.5 201 191-416 4-204 (333)
62 cd08228 STKc_Nek6 Catalytic do 100.0 1.2E-39 2.6E-44 311.8 25.1 264 192-486 2-265 (267)
63 cd05595 STKc_PKB_beta Catalyti 100.0 4.3E-40 9.2E-45 323.8 22.5 245 198-481 1-250 (323)
64 cd05093 PTKc_TrkB Catalytic do 100.0 8.9E-40 1.9E-44 316.5 24.3 261 192-486 5-279 (288)
65 KOG0196 Tyrosine kinase, EPH ( 100.0 9.7E-42 2.1E-46 341.6 10.7 262 189-487 626-892 (996)
66 cd05072 PTKc_Lyn Catalytic dom 100.0 5.7E-40 1.2E-44 313.0 22.5 256 191-486 5-261 (261)
67 KOG0033 Ca2+/calmodulin-depend 100.0 3.8E-42 8.3E-47 302.0 6.7 256 189-481 8-266 (355)
68 cd05054 PTKc_VEGFR Catalytic d 100.0 4.7E-40 1E-44 325.2 22.3 267 189-487 4-334 (337)
69 cd05052 PTKc_Abl Catalytic dom 100.0 9.9E-40 2.2E-44 311.8 23.7 257 192-487 6-263 (263)
70 cd05049 PTKc_Trk Catalytic dom 100.0 9.2E-40 2E-44 314.8 23.6 261 192-485 5-280 (280)
71 cd05593 STKc_PKB_gamma Catalyt 100.0 4.4E-40 9.6E-45 324.4 21.8 245 198-481 1-250 (328)
72 cd07871 STKc_PCTAIRE3 Catalyti 100.0 3.3E-40 7.2E-45 319.4 20.5 260 192-481 5-284 (288)
73 cd05628 STKc_NDR1 Catalytic do 100.0 1.2E-39 2.7E-44 325.8 25.1 256 193-481 2-292 (363)
74 cd05033 PTKc_EphR Catalytic do 100.0 1.5E-39 3.2E-44 311.1 24.6 260 192-487 4-266 (266)
75 cd05062 PTKc_IGF-1R Catalytic 100.0 9E-40 2E-44 314.5 21.9 262 191-485 5-277 (277)
76 cd05599 STKc_NDR_like Catalyti 100.0 6.7E-40 1.5E-44 328.1 21.8 255 193-481 2-295 (364)
77 cd05588 STKc_aPKC Catalytic do 100.0 1.4E-39 3.1E-44 321.0 23.5 247 198-476 1-250 (329)
78 cd05584 STKc_p70S6K Catalytic 100.0 1E-39 2.2E-44 321.2 22.2 247 198-481 2-255 (323)
79 cd05114 PTKc_Tec_Rlk Catalytic 100.0 1.8E-39 4E-44 308.6 22.8 251 193-484 5-256 (256)
80 cd05108 PTKc_EGFR Catalytic do 100.0 2E-39 4.4E-44 318.2 23.7 258 191-486 6-268 (316)
81 cd05055 PTKc_PDGFR Catalytic d 100.0 2.4E-39 5.1E-44 315.6 24.0 263 191-487 34-302 (302)
82 cd05608 STKc_GRK1 Catalytic do 100.0 2.2E-39 4.8E-44 312.4 23.4 251 200-481 1-256 (280)
83 cd05626 STKc_LATS2 Catalytic d 100.0 1.8E-39 3.9E-44 326.7 23.7 256 193-481 2-304 (381)
84 cd07862 STKc_CDK6 Catalytic do 100.0 9.7E-40 2.1E-44 316.4 20.8 261 193-481 2-286 (290)
85 cd05589 STKc_PKN Catalytic dom 100.0 1.7E-39 3.7E-44 319.8 22.8 248 194-481 1-256 (324)
86 cd07869 STKc_PFTAIRE1 Catalyti 100.0 1.1E-39 2.5E-44 318.0 21.2 262 191-481 4-287 (303)
87 cd05107 PTKc_PDGFR_beta Cataly 100.0 2.3E-39 5.1E-44 326.0 23.9 269 187-487 32-400 (401)
88 cd05084 PTKc_Fes Catalytic dom 100.0 3.1E-39 6.6E-44 306.3 23.2 251 198-485 1-252 (252)
89 cd05035 PTKc_Axl_like Catalyti 100.0 2.9E-39 6.4E-44 309.9 23.4 262 194-487 1-273 (273)
90 cd05094 PTKc_TrkC Catalytic do 100.0 3.7E-39 8E-44 312.6 24.3 260 193-486 6-282 (291)
91 KOG0658 Glycogen synthase kina 100.0 8.3E-41 1.8E-45 311.0 12.0 258 193-481 25-305 (364)
92 cd05148 PTKc_Srm_Brk Catalytic 100.0 2E-39 4.4E-44 309.1 21.9 255 192-486 6-261 (261)
93 cd05090 PTKc_Ror1 Catalytic do 100.0 3.2E-39 6.9E-44 311.7 23.4 261 192-485 5-282 (283)
94 cd05573 STKc_ROCK_NDR_like Cat 100.0 5.6E-40 1.2E-44 326.8 18.7 255 193-481 2-284 (350)
95 cd05053 PTKc_FGFR Catalytic do 100.0 1.5E-39 3.3E-44 315.5 21.2 265 190-487 10-292 (293)
96 cd05091 PTKc_Ror2 Catalytic do 100.0 1.6E-39 3.4E-44 313.8 21.2 260 193-485 6-282 (283)
97 cd05068 PTKc_Frk_like Catalyti 100.0 3.1E-39 6.8E-44 307.9 22.9 256 191-486 5-261 (261)
98 cd05629 STKc_NDR_like_fungal C 100.0 8.4E-40 1.8E-44 328.8 20.0 255 193-481 2-304 (377)
99 cd05075 PTKc_Axl Catalytic dom 100.0 4.7E-39 1E-43 308.5 24.3 261 195-487 2-272 (272)
100 cd08229 STKc_Nek7 Catalytic do 100.0 7E-39 1.5E-43 306.5 25.3 263 193-486 3-265 (267)
101 cd07859 STKc_TDY_MAPK_plant Ca 100.0 1E-39 2.2E-44 323.3 20.2 261 193-481 1-289 (338)
102 KOG1094 Discoidin domain recep 100.0 2.9E-40 6.3E-45 321.4 15.7 266 191-486 537-804 (807)
103 cd05590 STKc_nPKC_eta Catalyti 100.0 2.3E-39 5.1E-44 318.2 22.4 240 198-476 1-241 (320)
104 cd05101 PTKc_FGFR2 Catalytic d 100.0 4.6E-39 1E-43 313.9 24.3 264 191-487 14-297 (304)
105 KOG4717 Serine/threonine prote 100.0 6.9E-40 1.5E-44 314.4 17.9 250 192-481 18-269 (864)
106 cd05596 STKc_ROCK Catalytic do 100.0 1E-39 2.2E-44 326.9 20.0 255 192-481 43-303 (370)
107 cd05032 PTKc_InsR_like Catalyt 100.0 2.2E-39 4.8E-44 311.7 21.6 262 191-485 5-277 (277)
108 cd05061 PTKc_InsR Catalytic do 100.0 3.9E-39 8.4E-44 312.0 23.3 264 190-486 4-278 (288)
109 cd05594 STKc_PKB_alpha Catalyt 100.0 9.9E-40 2.1E-44 321.6 19.4 245 198-481 1-251 (325)
110 PLN00034 mitogen-activated pro 100.0 2.3E-39 5E-44 322.7 22.2 249 192-481 74-327 (353)
111 cd05601 STKc_CRIK Catalytic do 100.0 6.2E-40 1.3E-44 323.8 18.0 255 193-481 2-262 (330)
112 cd05618 STKc_aPKC_iota Catalyt 100.0 2.4E-39 5.2E-44 319.2 22.0 247 198-476 1-250 (329)
113 cd05617 STKc_aPKC_zeta Catalyt 100.0 3.9E-39 8.4E-44 317.6 23.3 248 198-477 1-249 (327)
114 cd08224 STKc_Nek6_Nek7 Catalyt 100.0 1.1E-38 2.3E-43 305.0 25.7 264 192-486 2-265 (267)
115 cd05614 STKc_MSK2_N N-terminal 100.0 1.6E-39 3.5E-44 321.1 20.4 257 193-481 1-266 (332)
116 cd05045 PTKc_RET Catalytic dom 100.0 3.9E-39 8.3E-44 312.3 22.5 261 194-487 2-287 (290)
117 cd05591 STKc_nPKC_epsilon Cata 100.0 2.9E-39 6.2E-44 317.8 21.8 245 198-481 1-253 (321)
118 cd05582 STKc_RSK_N N-terminal 100.0 6.2E-40 1.3E-44 322.1 17.0 242 198-478 2-245 (318)
119 cd05587 STKc_cPKC Catalytic do 100.0 5.7E-39 1.2E-43 316.1 23.8 245 193-476 1-246 (324)
120 KOG4257 Focal adhesion tyrosin 100.0 7.3E-40 1.6E-44 320.5 16.9 259 191-487 388-650 (974)
121 KOG0032 Ca2+/calmodulin-depend 100.0 4.6E-39 1E-43 317.0 22.9 254 191-481 34-292 (382)
122 cd05111 PTK_HER3 Pseudokinase 100.0 1.3E-38 2.9E-43 306.7 25.7 257 192-486 7-268 (279)
123 cd05116 PTKc_Syk Catalytic dom 100.0 9.6E-39 2.1E-43 303.9 24.3 251 199-486 2-255 (257)
124 cd05605 STKc_GRK4_like Catalyt 100.0 2.9E-39 6.4E-44 312.3 21.1 254 194-481 2-260 (285)
125 cd05625 STKc_LATS1 Catalytic d 100.0 1.7E-39 3.7E-44 327.1 20.2 255 193-481 2-304 (382)
126 cd05592 STKc_nPKC_theta_delta 100.0 3.4E-39 7.4E-44 316.4 21.8 244 198-480 1-246 (316)
127 cd05570 STKc_PKC Catalytic dom 100.0 7E-39 1.5E-43 314.5 23.9 245 198-481 1-251 (318)
128 cd05619 STKc_nPKC_theta Cataly 100.0 6.2E-39 1.3E-43 314.5 23.2 244 198-480 1-246 (316)
129 cd05071 PTKc_Src Catalytic dom 100.0 6.4E-39 1.4E-43 306.1 22.6 256 191-487 5-261 (262)
130 cd05598 STKc_LATS Catalytic do 100.0 1.1E-39 2.4E-44 327.9 18.2 255 193-481 2-300 (376)
131 cd05092 PTKc_TrkA Catalytic do 100.0 8E-39 1.7E-43 308.5 23.5 259 193-485 6-280 (280)
132 cd05575 STKc_SGK Catalytic dom 100.0 3.4E-39 7.3E-44 317.6 21.3 241 198-477 1-242 (323)
133 cd05098 PTKc_FGFR1 Catalytic d 100.0 6.8E-39 1.5E-43 313.2 23.1 263 192-487 18-300 (307)
134 cd05113 PTKc_Btk_Bmx Catalytic 100.0 7.3E-39 1.6E-43 304.6 22.5 251 193-484 5-256 (256)
135 KOG0594 Protein kinase PCTAIRE 100.0 2E-39 4.4E-44 302.3 18.1 264 193-482 12-302 (323)
136 cd05602 STKc_SGK1 Catalytic do 100.0 3.4E-39 7.3E-44 317.9 20.8 244 198-480 1-245 (325)
137 cd05043 PTK_Ryk Pseudokinase d 100.0 1.4E-38 3.1E-43 306.6 24.7 263 191-486 5-276 (280)
138 cd06619 PKc_MKK5 Catalytic dom 100.0 1.3E-38 2.8E-43 306.9 24.1 251 193-481 2-252 (279)
139 cd05109 PTKc_HER2 Catalytic do 100.0 2.2E-38 4.8E-43 305.2 25.6 258 191-486 6-268 (279)
140 cd05620 STKc_nPKC_delta Cataly 100.0 5E-39 1.1E-43 315.2 21.5 244 198-480 1-246 (316)
141 PTZ00036 glycogen synthase kin 100.0 2.9E-39 6.2E-44 330.2 20.4 258 191-481 65-350 (440)
142 cd05095 PTKc_DDR2 Catalytic do 100.0 6.4E-39 1.4E-43 311.7 21.8 268 192-485 5-296 (296)
143 cd08529 STKc_FA2-like Catalyti 100.0 1.5E-38 3.3E-43 302.0 23.8 251 194-481 2-252 (256)
144 cd05621 STKc_ROCK2 Catalytic d 100.0 2.8E-39 6.1E-44 323.4 19.6 255 192-481 43-303 (370)
145 cd05103 PTKc_VEGFR2 Catalytic 100.0 1.1E-38 2.4E-43 316.5 23.7 266 190-487 5-340 (343)
146 cd05616 STKc_cPKC_beta Catalyt 100.0 4.7E-39 1E-43 316.6 20.8 245 193-476 1-246 (323)
147 cd05607 STKc_GRK7 Catalytic do 100.0 8.5E-39 1.8E-43 307.8 21.7 249 200-481 1-249 (277)
148 cd05067 PTKc_Lck_Blk Catalytic 100.0 1.5E-38 3.1E-43 303.2 23.1 256 190-486 4-260 (260)
149 cd05051 PTKc_DDR Catalytic dom 100.0 1.9E-38 4E-43 308.3 24.2 265 192-485 5-296 (296)
150 cd05080 PTKc_Tyk2_rpt2 Catalyt 100.0 3.8E-39 8.2E-44 311.2 19.2 262 194-486 6-281 (283)
151 cd06625 STKc_MEKK3_like Cataly 100.0 1.9E-38 4.2E-43 302.6 23.8 258 192-482 2-260 (263)
152 cd05070 PTKc_Fyn_Yrk Catalytic 100.0 8.2E-39 1.8E-43 304.9 21.2 255 191-486 5-260 (260)
153 cd05066 PTKc_EphR_A Catalytic 100.0 2.2E-38 4.7E-43 303.2 24.0 260 192-487 4-267 (267)
154 cd05622 STKc_ROCK1 Catalytic d 100.0 6.1E-39 1.3E-43 321.2 21.0 255 192-481 43-303 (371)
155 cd05627 STKc_NDR2 Catalytic do 100.0 4.7E-39 1E-43 321.3 20.1 254 193-480 2-291 (360)
156 cd05082 PTKc_Csk Catalytic dom 100.0 1.5E-38 3.2E-43 302.3 22.6 249 192-486 6-256 (256)
157 cd05063 PTKc_EphR_A2 Catalytic 100.0 3.6E-38 7.9E-43 301.7 25.2 260 192-487 5-268 (268)
158 KOG0199 ACK and related non-re 100.0 1.9E-39 4.1E-44 321.3 16.6 260 187-482 105-368 (1039)
159 cd05050 PTKc_Musk Catalytic do 100.0 1.2E-38 2.6E-43 308.5 22.0 262 191-485 4-288 (288)
160 KOG1989 ARK protein kinase fam 100.0 2.6E-39 5.6E-44 331.7 18.1 258 191-486 36-311 (738)
161 cd05115 PTKc_Zap-70 Catalytic 100.0 2.8E-38 6.1E-43 300.8 24.1 251 199-486 2-255 (257)
162 KOG0577 Serine/threonine prote 100.0 5.8E-40 1.3E-44 319.4 12.4 250 191-481 25-277 (948)
163 cd05099 PTKc_FGFR4 Catalytic d 100.0 2.5E-38 5.4E-43 310.2 24.2 263 191-486 11-293 (314)
164 cd05039 PTKc_Csk_like Catalyti 100.0 3.2E-38 7E-43 300.0 24.2 251 191-486 5-256 (256)
165 cd05097 PTKc_DDR_like Catalyti 100.0 2.5E-38 5.4E-43 307.4 23.7 266 192-485 5-295 (295)
166 cd05081 PTKc_Jak2_Jak3_rpt2 Ca 100.0 5.4E-38 1.2E-42 303.2 25.8 265 192-486 4-283 (284)
167 cd05036 PTKc_ALK_LTK Catalytic 100.0 2.6E-38 5.5E-43 304.4 23.4 261 192-485 6-277 (277)
168 KOG0579 Ste20-like serine/thre 100.0 4.9E-40 1.1E-44 321.9 11.5 253 191-481 31-288 (1187)
169 KOG0667 Dual-specificity tyros 100.0 3.6E-39 7.9E-44 320.9 17.9 198 193-418 187-392 (586)
170 cd07876 STKc_JNK2 Catalytic do 100.0 1E-38 2.2E-43 318.9 21.1 263 192-481 21-314 (359)
171 cd06644 STKc_STK10_LOK Catalyt 100.0 5.8E-38 1.2E-42 304.4 25.8 254 190-481 10-268 (292)
172 cd05069 PTKc_Yes Catalytic dom 100.0 2.7E-38 5.9E-43 301.3 23.0 254 192-486 6-260 (260)
173 cd06643 STKc_SLK Catalytic dom 100.0 2.2E-38 4.8E-43 305.7 22.6 252 192-481 5-261 (282)
174 cd08219 STKc_Nek3 Catalytic do 100.0 2.2E-38 4.7E-43 301.0 22.1 252 193-482 1-252 (255)
175 cd05065 PTKc_EphR_B Catalytic 100.0 3.2E-38 7E-43 302.3 23.4 259 193-487 5-269 (269)
176 cd05604 STKc_SGK3 Catalytic do 100.0 6.7E-39 1.5E-43 315.7 19.2 242 198-478 1-243 (325)
177 PHA03211 serine/threonine kina 100.0 2.8E-38 6.1E-43 322.0 24.1 263 191-482 168-455 (461)
178 cd05087 PTKc_Aatyk1_Aatyk3 Cat 100.0 5.6E-38 1.2E-42 300.7 24.8 258 198-484 1-268 (269)
179 cd05059 PTKc_Tec_like Catalyti 100.0 2E-38 4.4E-43 301.5 21.1 250 193-483 5-255 (256)
180 cd05089 PTKc_Tie1 Catalytic do 100.0 3E-38 6.5E-43 307.1 22.7 258 192-486 2-275 (297)
181 cd06646 STKc_MAP4K5 Catalytic 100.0 1.9E-38 4.2E-43 303.5 20.9 255 192-483 9-266 (267)
182 cd05615 STKc_cPKC_alpha Cataly 100.0 2.1E-38 4.5E-43 311.9 21.7 244 194-476 2-246 (323)
183 PRK13184 pknD serine/threonine 100.0 2E-38 4.2E-43 337.3 22.9 265 192-486 2-290 (932)
184 cd05603 STKc_SGK2 Catalytic do 100.0 2.4E-38 5.2E-43 311.3 22.0 241 198-477 1-242 (321)
185 cd05100 PTKc_FGFR3 Catalytic d 100.0 3.4E-38 7.4E-43 311.9 23.0 265 189-486 9-293 (334)
186 cd06654 STKc_PAK1 Catalytic do 100.0 2.6E-38 5.6E-43 307.4 21.7 250 192-481 20-269 (296)
187 cd05088 PTKc_Tie2 Catalytic do 100.0 2.2E-38 4.8E-43 308.9 21.2 258 192-486 7-280 (303)
188 cd06615 PKc_MEK Catalytic doma 100.0 9E-38 2E-42 305.4 25.5 256 193-482 2-287 (308)
189 cd06611 STKc_SLK_like Catalyti 100.0 2.9E-38 6.4E-43 304.4 21.6 253 191-481 4-261 (280)
190 cd05042 PTKc_Aatyk Catalytic d 100.0 9.2E-38 2E-42 299.2 24.8 257 199-484 2-268 (269)
191 cd07853 STKc_NLK Catalytic dom 100.0 1.9E-38 4E-43 318.5 20.8 263 194-481 2-287 (372)
192 PHA03209 serine/threonine kina 100.0 3.8E-38 8.2E-43 314.2 22.7 193 190-414 64-256 (357)
193 cd05040 PTKc_Ack_like Catalyti 100.0 9.2E-38 2E-42 297.0 24.4 252 198-484 1-256 (257)
194 PHA03207 serine/threonine kina 100.0 5.4E-38 1.2E-42 317.0 24.1 259 192-481 92-374 (392)
195 cd05079 PTKc_Jak1_rpt2 Catalyt 100.0 9.3E-38 2E-42 301.7 24.7 266 193-487 5-284 (284)
196 cd05034 PTKc_Src_like Catalyti 100.0 4.2E-38 9.1E-43 300.0 22.0 256 191-486 5-261 (261)
197 cd05597 STKc_DMPK_like Catalyt 100.0 6.1E-38 1.3E-42 309.6 23.9 257 193-481 2-265 (331)
198 cd05086 PTKc_Aatyk2 Catalytic 100.0 1.2E-37 2.6E-42 298.3 24.9 258 198-484 1-267 (268)
199 cd05058 PTKc_Met_Ron Catalytic 100.0 8.5E-38 1.8E-42 298.1 23.7 254 198-487 1-260 (262)
200 cd05073 PTKc_Hck Catalytic dom 100.0 1.1E-37 2.3E-42 297.2 24.3 256 190-486 4-260 (260)
201 KOG0584 Serine/threonine prote 100.0 9.7E-39 2.1E-43 315.0 17.4 250 195-481 43-295 (632)
202 cd05630 STKc_GRK6 Catalytic do 100.0 2.9E-38 6.2E-43 305.4 20.5 254 194-481 2-260 (285)
203 cd08227 PK_STRAD_alpha Pseudok 100.0 6.5E-38 1.4E-42 309.0 23.4 261 196-481 2-306 (327)
204 cd05057 PTKc_EGFR_like Catalyt 100.0 9.7E-38 2.1E-42 300.7 24.0 258 192-486 7-268 (279)
205 cd00192 PTKc Catalytic domain 100.0 1.1E-37 2.5E-42 296.5 24.2 254 198-484 1-262 (262)
206 PTZ00266 NIMA-related protein 100.0 3.5E-38 7.7E-43 336.6 22.9 257 192-481 13-294 (1021)
207 cd05047 PTKc_Tie Catalytic dom 100.0 7.6E-38 1.7E-42 300.0 23.1 253 198-487 1-269 (270)
208 cd08528 STKc_Nek10 Catalytic d 100.0 1.4E-37 3E-42 297.9 24.7 267 194-485 2-269 (269)
209 cd06637 STKc_TNIK Catalytic do 100.0 5.9E-38 1.3E-42 300.9 22.2 252 191-481 5-268 (272)
210 cd07874 STKc_JNK3 Catalytic do 100.0 2.7E-38 5.9E-43 315.3 20.5 264 191-481 16-310 (355)
211 cd07872 STKc_PCTAIRE2 Catalyti 100.0 3.4E-38 7.3E-43 308.6 20.8 262 192-481 6-285 (309)
212 cd05085 PTKc_Fer Catalytic dom 100.0 2.1E-37 4.4E-42 293.3 25.3 248 198-484 1-249 (250)
213 cd07875 STKc_JNK1 Catalytic do 100.0 5.4E-38 1.2E-42 314.2 22.3 263 191-481 23-317 (364)
214 cd05076 PTK_Tyk2_rpt1 Pseudoki 100.0 1.2E-37 2.7E-42 299.2 23.9 241 199-484 2-274 (274)
215 cd06645 STKc_MAP4K3 Catalytic 100.0 7.6E-38 1.6E-42 299.3 22.3 253 192-481 9-264 (267)
216 cd06655 STKc_PAK2 Catalytic do 100.0 7.1E-38 1.5E-42 304.3 22.5 250 192-481 19-268 (296)
217 cd08221 STKc_Nek9 Catalytic do 100.0 1.5E-37 3.2E-42 295.4 24.0 253 193-482 1-253 (256)
218 cd08223 STKc_Nek4 Catalytic do 100.0 1.3E-37 2.9E-42 295.7 23.6 252 193-481 1-253 (257)
219 cd05632 STKc_GRK5 Catalytic do 100.0 8.5E-38 1.8E-42 302.1 22.6 254 194-481 2-260 (285)
220 cd07863 STKc_CDK4 Catalytic do 100.0 3.4E-38 7.4E-43 305.2 19.7 260 193-481 1-284 (288)
221 cd05060 PTKc_Syk_like Catalyti 100.0 1.1E-37 2.5E-42 296.5 22.9 251 198-486 1-255 (257)
222 KOG0574 STE20-like serine/thre 100.0 9.7E-41 2.1E-45 301.1 1.5 251 191-481 32-282 (502)
223 cd06638 STKc_myosinIIIA Cataly 100.0 8.3E-38 1.8E-42 302.2 22.0 256 191-482 17-283 (286)
224 cd07868 STKc_CDK8 Catalytic do 100.0 4.7E-38 1E-42 308.7 20.3 200 198-418 7-220 (317)
225 cd06620 PKc_MAPKK_Byr1_like Ca 100.0 7.9E-38 1.7E-42 302.1 21.6 257 192-482 5-266 (284)
226 cd05083 PTKc_Chk Catalytic dom 100.0 1E-37 2.2E-42 296.3 21.9 247 192-485 6-253 (254)
227 cd06612 STKc_MST1_2 Catalytic 100.0 1.5E-37 3.3E-42 295.1 22.9 251 191-481 2-252 (256)
228 PF00069 Pkinase: Protein kina 100.0 1.2E-38 2.7E-43 303.2 15.3 255 194-481 1-256 (260)
229 cd06613 STKc_MAP4K3_like Catal 100.0 2.1E-37 4.5E-42 295.2 23.5 254 192-481 3-259 (262)
230 KOG0596 Dual specificity; seri 100.0 2.7E-38 5.9E-43 306.5 17.4 255 190-481 359-626 (677)
231 cd05044 PTKc_c-ros Catalytic d 100.0 1E-37 2.3E-42 298.7 21.1 255 198-485 1-269 (269)
232 cd06631 STKc_YSK4 Catalytic do 100.0 2.6E-37 5.5E-42 295.4 23.7 257 193-481 1-261 (265)
233 cd05046 PTK_CCK4 Pseudokinase 100.0 2.4E-37 5.3E-42 297.2 23.4 261 192-485 5-275 (275)
234 cd05077 PTK_Jak1_rpt1 Pseudoki 100.0 3.9E-37 8.4E-42 293.8 24.6 242 198-484 1-262 (262)
235 cd06609 STKc_MST3_like Catalyt 100.0 1.8E-37 4E-42 297.9 22.4 249 193-481 2-250 (274)
236 cd05056 PTKc_FAK Catalytic dom 100.0 3.1E-37 6.8E-42 295.7 23.8 257 192-486 6-265 (270)
237 cd06656 STKc_PAK3 Catalytic do 100.0 7.6E-38 1.6E-42 304.3 19.7 250 192-481 19-268 (297)
238 cd07873 STKc_PCTAIRE1 Catalyti 100.0 7.8E-38 1.7E-42 304.8 19.8 260 192-481 6-285 (301)
239 cd07878 STKc_p38beta_MAPK11 Ca 100.0 1.2E-37 2.6E-42 309.2 21.4 256 192-481 15-297 (343)
240 cd05623 STKc_MRCK_alpha Cataly 100.0 1.8E-37 3.8E-42 306.5 22.5 257 193-481 2-265 (332)
241 cd06622 PKc_MAPKK_PBS2_like Ca 100.0 2.6E-37 5.7E-42 298.7 23.3 254 193-481 2-261 (286)
242 cd05624 STKc_MRCK_beta Catalyt 100.0 1.2E-37 2.6E-42 307.5 21.1 258 192-481 1-265 (331)
243 cd05041 PTKc_Fes_like Catalyti 100.0 5.3E-37 1.2E-41 290.7 24.7 250 198-485 1-251 (251)
244 cd07861 STKc_CDK1_euk Catalyti 100.0 6.4E-38 1.4E-42 302.8 18.6 261 194-481 2-281 (285)
245 cd06628 STKc_MAPKKK_Byr2_like 100.0 5.5E-37 1.2E-41 293.3 24.8 258 194-481 2-263 (267)
246 cd05110 PTKc_HER4 Catalytic do 100.0 2.8E-37 6.1E-42 301.2 23.0 258 191-486 6-268 (303)
247 cd05609 STKc_MAST Catalytic do 100.0 5E-37 1.1E-41 299.7 24.7 258 193-484 2-272 (305)
248 cd05586 STKc_Sck1_like Catalyt 100.0 4.8E-38 1E-42 310.4 17.6 244 200-481 1-252 (330)
249 cd05078 PTK_Jak2_Jak3_rpt1 Pse 100.0 1.6E-37 3.4E-42 295.8 20.5 242 198-484 1-258 (258)
250 cd05074 PTKc_Tyro3 Catalytic d 100.0 4.3E-37 9.4E-42 295.0 23.7 261 194-486 1-272 (273)
251 cd06621 PKc_MAPKK_Pek1_like Ca 100.0 8E-37 1.7E-41 295.6 25.6 262 193-481 2-265 (287)
252 cd06642 STKc_STK25-YSK1 Cataly 100.0 1.9E-37 4.2E-42 298.3 21.1 248 193-481 5-252 (277)
253 cd08218 STKc_Nek1 Catalytic do 100.0 4.7E-37 1E-41 291.9 23.4 252 193-481 1-252 (256)
254 KOG0983 Mitogen-activated prot 100.0 3.5E-38 7.5E-43 281.3 14.4 253 192-481 92-348 (391)
255 cd08217 STKc_Nek2 Catalytic do 100.0 5.6E-37 1.2E-41 292.4 23.6 257 193-481 1-261 (265)
256 cd06640 STKc_MST4 Catalytic do 100.0 3.7E-37 8.1E-42 296.3 22.5 249 193-482 5-253 (277)
257 cd05038 PTKc_Jak_rpt2 Catalyti 100.0 4.7E-37 1E-41 296.4 23.1 266 192-486 4-283 (284)
258 cd05112 PTKc_Itk Catalytic dom 100.0 4.9E-37 1.1E-41 291.8 22.8 251 193-484 5-256 (256)
259 cd06629 STKc_MAPKKK_Bck1_like 100.0 5.9E-37 1.3E-41 294.0 23.6 264 194-481 3-268 (272)
260 cd06639 STKc_myosinIIIB Cataly 100.0 3.9E-37 8.4E-42 298.4 22.4 255 191-481 21-286 (291)
261 KOG4279 Serine/threonine prote 100.0 1.4E-38 3.1E-43 314.6 12.2 245 199-481 582-831 (1226)
262 cd06658 STKc_PAK5 Catalytic do 100.0 2.8E-37 6.1E-42 299.5 20.8 250 193-482 23-272 (292)
263 cd06608 STKc_myosinIII_like Ca 100.0 5E-37 1.1E-41 294.5 22.4 255 191-481 5-271 (275)
264 KOG0690 Serine/threonine prote 100.0 2.3E-38 4.9E-43 288.6 12.2 244 192-474 168-411 (516)
265 cd08220 STKc_Nek8 Catalytic do 100.0 8.7E-37 1.9E-41 289.9 23.2 251 193-481 1-252 (256)
266 cd07867 STKc_CDC2L6 Catalytic 100.0 2.7E-37 5.8E-42 303.2 20.2 200 198-418 7-220 (317)
267 cd06659 STKc_PAK6 Catalytic do 100.0 3.9E-37 8.4E-42 299.3 21.0 249 193-481 22-270 (297)
268 cd06636 STKc_MAP4K4_6 Catalyti 100.0 3.8E-37 8.2E-42 297.0 20.6 252 191-481 15-278 (282)
269 PHA03210 serine/threonine kina 100.0 5E-37 1.1E-41 318.4 22.9 281 192-481 148-453 (501)
270 cd06617 PKc_MKK3_6 Catalytic d 100.0 6.6E-37 1.4E-41 295.4 22.2 253 193-481 2-260 (283)
271 smart00219 TyrKc Tyrosine kina 100.0 1.1E-36 2.3E-41 289.4 23.3 253 195-483 2-258 (258)
272 PTZ00284 protein kinase; Provi 100.0 4.7E-37 1E-41 317.1 22.5 261 191-481 128-437 (467)
273 cd06610 STKc_OSR1_SPAK Catalyt 100.0 7E-37 1.5E-41 292.3 21.9 258 193-481 2-263 (267)
274 cd05580 STKc_PKA Catalytic dom 100.0 9.9E-37 2.2E-41 295.4 23.2 246 193-480 2-252 (290)
275 cd06605 PKc_MAPKK Catalytic do 100.0 7E-37 1.5E-41 292.2 21.7 254 193-481 2-256 (265)
276 cd05037 PTK_Jak_rpt1 Pseudokin 100.0 1.4E-36 3E-41 289.1 23.5 240 198-484 1-259 (259)
277 cd06651 STKc_MEKK3 Catalytic d 100.0 1.4E-36 3E-41 290.6 23.4 255 193-481 3-260 (266)
278 KOG0986 G protein-coupled rece 100.0 4.1E-38 8.9E-43 298.5 12.5 253 190-476 183-435 (591)
279 cd07847 STKc_CDKL1_4 Catalytic 100.0 5.1E-37 1.1E-41 296.5 20.4 264 192-481 1-282 (286)
280 cd06652 STKc_MEKK2 Catalytic d 100.0 1.3E-36 2.8E-41 290.5 23.0 255 193-481 3-260 (265)
281 cd06616 PKc_MKK4 Catalytic dom 100.0 5.3E-37 1.1E-41 296.9 20.4 257 193-481 5-266 (288)
282 cd06624 STKc_ASK Catalytic dom 100.0 1.7E-36 3.7E-41 290.3 23.6 251 193-481 9-264 (268)
283 cd06632 STKc_MEKK1_plant Catal 100.0 9.4E-37 2E-41 289.9 21.6 252 194-481 2-254 (258)
284 cd06647 STKc_PAK_I Catalytic d 100.0 7E-37 1.5E-41 296.9 20.6 250 192-481 19-268 (293)
285 cd05578 STKc_Yank1 Catalytic d 100.0 5.7E-37 1.2E-41 291.8 19.5 251 193-480 1-253 (258)
286 cd07839 STKc_CDK5 Catalytic do 100.0 2.5E-37 5.5E-42 298.5 17.4 261 193-481 1-280 (284)
287 cd07846 STKc_CDKL2_3 Catalytic 100.0 4.7E-37 1E-41 296.9 19.2 260 193-481 2-282 (286)
288 cd05574 STKc_phototropin_like 100.0 1.9E-36 4.2E-41 297.1 23.8 256 193-481 2-288 (316)
289 KOG0604 MAP kinase-activated p 100.0 1.5E-37 3.3E-42 280.6 14.2 252 192-481 61-321 (400)
290 cd06648 STKc_PAK_II Catalytic 100.0 1.9E-36 4.1E-41 292.7 22.6 249 193-481 20-268 (285)
291 cd06623 PKc_MAPKK_plant_like C 100.0 4.1E-36 9E-41 286.5 24.5 253 193-481 2-255 (264)
292 cd06641 STKc_MST3 Catalytic do 100.0 2.9E-36 6.2E-41 290.2 23.5 249 192-481 4-252 (277)
293 cd06630 STKc_MEKK1 Catalytic d 100.0 1.9E-36 4.1E-41 289.7 21.8 259 194-481 2-263 (268)
294 cd07844 STKc_PCTAIRE_like Cata 100.0 1.6E-36 3.5E-41 293.9 21.5 258 192-481 5-287 (291)
295 cd06917 STKc_NAK1_like Catalyt 100.0 2.1E-36 4.5E-41 291.0 21.2 249 193-481 2-254 (277)
296 cd07832 STKc_CCRK Catalytic do 100.0 2.1E-36 4.6E-41 292.2 21.3 261 193-481 1-281 (286)
297 cd06607 STKc_TAO Catalytic dom 100.0 4.8E-36 1E-40 293.1 23.9 250 191-481 14-266 (307)
298 cd06626 STKc_MEKK4 Catalytic d 100.0 3.7E-36 8E-41 286.9 22.5 255 193-481 1-260 (264)
299 cd07841 STKc_CDK7 Catalytic do 100.0 3.8E-36 8.2E-41 292.4 22.6 262 194-481 2-281 (298)
300 cd08225 STKc_Nek5 Catalytic do 100.0 3.9E-36 8.5E-41 285.6 21.9 252 193-481 1-253 (257)
301 cd07860 STKc_CDK2_3 Catalytic 100.0 1.8E-36 4E-41 292.5 19.9 260 194-481 2-280 (284)
302 cd07833 STKc_CDKL Catalytic do 100.0 2.4E-36 5.2E-41 292.1 20.3 261 193-481 2-284 (288)
303 cd08530 STKc_CNK2-like Catalyt 100.0 6.1E-36 1.3E-40 284.0 22.6 252 193-481 1-252 (256)
304 PLN00113 leucine-rich repeat r 100.0 2.7E-36 5.8E-41 338.5 23.4 259 193-486 691-951 (968)
305 cd07842 STKc_CDK8_like Catalyt 100.0 3.7E-36 7.9E-41 294.9 21.0 272 194-481 2-312 (316)
306 KOG0612 Rho-associated, coiled 100.0 2.7E-37 5.9E-42 320.9 13.2 254 192-480 75-336 (1317)
307 PHA02882 putative serine/threo 100.0 1E-35 2.2E-40 288.8 23.5 268 192-484 12-294 (294)
308 cd07843 STKc_CDC2L1 Catalytic 100.0 3.6E-36 7.7E-41 291.9 20.1 258 192-481 5-289 (293)
309 cd05572 STKc_cGK_PKG Catalytic 100.0 1.2E-35 2.6E-40 283.4 23.3 246 200-481 1-251 (262)
310 cd06614 STKc_PAK Catalytic dom 100.0 7.6E-36 1.6E-40 288.6 22.1 252 191-481 18-269 (286)
311 cd08215 STKc_Nek Catalytic dom 100.0 1.4E-35 3E-40 281.5 23.4 254 193-481 1-254 (258)
312 cd05611 STKc_Rim15_like Cataly 100.0 1.1E-35 2.3E-40 283.3 22.5 247 198-483 2-249 (260)
313 cd07837 STKc_CdkB_plant Cataly 100.0 6.4E-36 1.4E-40 290.3 21.4 263 193-481 2-290 (295)
314 cd07870 STKc_PFTAIRE2 Catalyti 100.0 7.1E-36 1.5E-40 289.5 21.1 261 192-481 5-287 (291)
315 cd08216 PK_STRAD Pseudokinase 100.0 1.3E-35 2.8E-40 291.0 23.0 260 195-481 5-294 (314)
316 cd07831 STKc_MOK Catalytic dom 100.0 9.5E-36 2.1E-40 287.0 21.7 262 194-481 1-278 (282)
317 KOG0586 Serine/threonine prote 100.0 1.3E-36 2.8E-41 299.7 15.7 250 191-481 55-305 (596)
318 cd05122 PKc_STE Catalytic doma 100.0 2.7E-35 5.9E-40 278.3 24.3 249 194-481 2-250 (253)
319 cd07850 STKc_JNK Catalytic dom 100.0 1.2E-35 2.5E-40 296.1 22.7 263 191-481 15-310 (353)
320 cd05633 STKc_GRK3 Catalytic do 100.0 1.1E-35 2.3E-40 286.5 21.6 245 199-481 1-254 (279)
321 cd05577 STKc_GRK Catalytic dom 100.0 9.9E-36 2.1E-40 286.4 21.2 248 200-481 1-253 (277)
322 cd08226 PK_STRAD_beta Pseudoki 100.0 1.9E-35 4E-40 291.6 23.6 259 198-481 4-307 (328)
323 cd06657 STKc_PAK4 Catalytic do 100.0 1.3E-35 2.9E-40 287.8 21.9 248 194-481 22-269 (292)
324 cd07835 STKc_CDK1_like Catalyt 100.0 9.1E-36 2E-40 287.5 20.5 260 194-481 1-279 (283)
325 cd07845 STKc_CDK10 Catalytic d 100.0 8.2E-36 1.8E-40 291.7 20.1 261 192-481 7-289 (309)
326 cd07865 STKc_CDK9 Catalytic do 100.0 5.2E-36 1.1E-40 292.9 18.6 266 191-481 11-306 (310)
327 KOG4250 TANK binding protein k 100.0 1.5E-36 3.3E-41 303.1 14.6 268 194-486 15-310 (732)
328 cd06606 STKc_MAPKKK Catalytic 100.0 2.9E-35 6.4E-40 279.2 22.8 253 194-481 2-256 (260)
329 cd05579 STKc_MAST_like Catalyt 100.0 1.9E-35 4E-40 281.9 21.4 249 200-483 1-255 (265)
330 PLN00009 cyclin-dependent kina 100.0 1.3E-35 2.7E-40 288.2 20.6 262 192-481 2-283 (294)
331 cd07836 STKc_Pho85 Catalytic d 100.0 1.2E-35 2.6E-40 286.7 20.3 261 193-481 1-280 (284)
332 cd06635 STKc_TAO1 Catalytic do 100.0 3.6E-35 7.9E-40 288.1 24.0 250 193-483 26-278 (317)
333 cd06653 STKc_MEKK3_like_1 Cata 100.0 4.7E-35 1E-39 279.7 24.0 255 193-481 3-260 (264)
334 KOG4645 MAPKKK (MAP kinase kin 100.0 7.2E-38 1.6E-42 329.1 4.8 253 193-481 1236-1493(1509)
335 PHA03390 pk1 serine/threonine- 100.0 4.3E-35 9.4E-40 280.4 22.9 243 192-481 14-261 (267)
336 KOG3653 Transforming growth fa 100.0 9.9E-36 2.1E-40 284.2 18.2 267 191-486 209-503 (534)
337 KOG1035 eIF-2alpha kinase GCN2 100.0 7.1E-36 1.5E-40 312.8 18.5 254 191-481 478-870 (1351)
338 cd06627 STKc_Cdc7_like Catalyt 100.0 5.7E-35 1.2E-39 276.8 23.1 250 193-481 1-250 (254)
339 cd05583 STKc_MSK_N N-terminal 100.0 4.4E-35 9.4E-40 283.6 22.7 259 194-484 2-265 (288)
340 cd05581 STKc_PDK1 Catalytic do 100.0 1.9E-35 4.2E-40 284.4 19.6 252 193-481 2-276 (280)
341 cd06634 STKc_TAO2 Catalytic do 100.0 4.5E-35 9.7E-40 286.3 22.3 251 191-482 14-267 (308)
342 cd07838 STKc_CDK4_6_like Catal 100.0 4.8E-35 1E-39 282.8 22.3 259 194-481 1-283 (287)
343 cd06618 PKc_MKK7 Catalytic dom 100.0 7.8E-35 1.7E-39 283.0 23.8 254 191-481 14-272 (296)
344 cd07855 STKc_ERK5 Catalytic do 100.0 7.5E-36 1.6E-40 295.2 16.9 265 192-481 5-293 (334)
345 cd07849 STKc_ERK1_2_like Catal 100.0 1.3E-35 2.8E-40 293.7 18.6 267 192-482 5-292 (336)
346 cd06633 STKc_TAO3 Catalytic do 100.0 8E-35 1.7E-39 285.2 23.9 248 193-481 22-272 (313)
347 cd07852 STKc_MAPK15 Catalytic 100.0 2.3E-35 5E-40 292.1 20.0 261 192-481 7-294 (337)
348 KOG1006 Mitogen-activated prot 100.0 2E-37 4.4E-42 275.5 4.3 259 192-481 64-326 (361)
349 cd08222 STKc_Nek11 Catalytic d 100.0 3.8E-35 8.2E-40 279.5 20.1 256 193-481 1-256 (260)
350 cd07858 STKc_TEY_MAPK_plant Ca 100.0 1.5E-35 3.2E-40 293.4 17.7 264 192-482 5-291 (337)
351 KOG0200 Fibroblast/platelet-de 100.0 1.6E-35 3.4E-40 311.9 18.9 269 186-486 290-579 (609)
352 KOG0696 Serine/threonine prote 100.0 6E-36 1.3E-40 280.5 13.9 245 192-475 349-594 (683)
353 cd07840 STKc_CDK9_like Catalyt 100.0 3.3E-35 7E-40 283.9 19.4 259 194-481 1-283 (287)
354 cd05606 STKc_beta_ARK Catalyti 100.0 9E-35 1.9E-39 279.9 22.1 248 199-481 1-254 (278)
355 cd05118 STKc_CMGC Catalytic do 100.0 5.8E-35 1.3E-39 281.6 20.7 259 194-481 1-279 (283)
356 KOG0666 Cyclin C-dependent kin 100.0 3.8E-36 8.2E-41 272.8 11.5 270 192-481 24-336 (438)
357 cd05613 STKc_MSK1_N N-terminal 100.0 9.6E-35 2.1E-39 281.4 21.6 256 194-481 2-267 (290)
358 cd07864 STKc_CDK12 Catalytic d 100.0 5.9E-35 1.3E-39 284.5 19.6 265 192-481 7-298 (302)
359 cd07830 STKc_MAK_like Catalyti 100.0 7.7E-35 1.7E-39 280.9 19.9 264 194-481 1-279 (283)
360 KOG2052 Activin A type IB rece 100.0 5.6E-35 1.2E-39 277.1 18.4 264 192-486 211-503 (513)
361 cd07856 STKc_Sty1_Hog1 Catalyt 100.0 9E-35 2E-39 286.6 20.3 263 191-481 9-287 (328)
362 KOG0607 MAP kinase-interacting 100.0 1.9E-35 4E-40 269.1 13.9 258 194-481 79-360 (463)
363 cd07866 STKc_BUR1 Catalytic do 100.0 6.6E-35 1.4E-39 285.2 18.7 263 192-481 8-307 (311)
364 cd07880 STKc_p38gamma_MAPK12 C 100.0 1.3E-34 2.9E-39 287.3 20.7 257 191-481 14-297 (343)
365 cd07877 STKc_p38alpha_MAPK14 C 100.0 2E-34 4.4E-39 286.1 21.5 257 191-481 16-299 (345)
366 cd07834 STKc_MAPK Catalytic do 100.0 2.1E-34 4.5E-39 284.4 21.1 261 193-481 1-288 (330)
367 cd05123 STKc_AGC Catalytic dom 100.0 4.4E-34 9.6E-39 270.3 22.3 239 200-477 1-239 (250)
368 KOG1025 Epidermal growth facto 100.0 2.9E-35 6.2E-40 296.3 14.2 257 193-486 697-957 (1177)
369 cd07851 STKc_p38 Catalytic dom 100.0 1.4E-34 3.1E-39 287.0 18.7 257 191-481 14-297 (343)
370 cd07879 STKc_p38delta_MAPK13 C 100.0 2.3E-34 5E-39 285.4 20.2 255 192-481 15-296 (342)
371 KOG0671 LAMMER dual specificit 100.0 1E-35 2.2E-40 277.5 9.7 259 191-481 88-405 (415)
372 cd07829 STKc_CDK_like Catalyti 100.0 2.3E-34 4.9E-39 277.3 19.4 258 194-481 1-278 (282)
373 cd07854 STKc_MAPK4_6 Catalytic 100.0 1.5E-34 3.2E-39 286.9 18.1 259 192-481 5-299 (342)
374 cd07857 STKc_MPK1 Catalytic do 100.0 3.7E-34 8.1E-39 282.8 20.8 262 193-481 1-291 (332)
375 cd05610 STKc_MASTL Catalytic d 100.0 5.9E-34 1.3E-38 304.4 23.9 149 192-360 4-152 (669)
376 PTZ00024 cyclin-dependent prot 100.0 4.5E-34 9.8E-39 282.6 20.4 276 192-481 8-312 (335)
377 KOG0614 cGMP-dependent protein 100.0 1.6E-35 3.4E-40 284.2 9.3 245 193-475 421-665 (732)
378 KOG0603 Ribosomal protein S6 k 100.0 3E-34 6.5E-39 284.5 16.9 240 191-481 321-562 (612)
379 KOG4236 Serine/threonine prote 100.0 3.3E-35 7.1E-40 282.9 8.7 245 198-480 570-817 (888)
380 cd05576 STKc_RPK118_like Catal 100.0 9.4E-34 2E-38 266.3 18.1 220 203-476 4-223 (237)
381 KOG1024 Receptor-like protein 100.0 5.9E-34 1.3E-38 265.7 16.4 264 190-486 282-555 (563)
382 KOG0662 Cyclin-dependent kinas 100.0 1.6E-34 3.5E-39 242.8 11.2 260 193-481 3-282 (292)
383 KOG0984 Mitogen-activated prot 100.0 4.8E-34 1E-38 245.2 13.9 225 188-438 42-271 (282)
384 KOG0587 Traf2- and Nck-interac 100.0 6.3E-34 1.4E-38 289.6 15.3 252 191-481 18-281 (953)
385 KOG0608 Warts/lats-like serine 100.0 1.2E-33 2.6E-38 277.3 15.8 209 194-422 631-879 (1034)
386 KOG1151 Tousled-like protein k 100.0 2.4E-34 5.3E-39 271.9 10.4 264 192-480 463-739 (775)
387 KOG0669 Cyclin T-dependent kin 100.0 1.2E-34 2.6E-39 255.8 3.3 266 191-481 16-314 (376)
388 smart00220 S_TKc Serine/Threon 100.0 2.1E-31 4.5E-36 249.9 20.9 240 204-481 1-240 (244)
389 KOG0695 Serine/threonine prote 100.0 2.1E-32 4.6E-37 250.6 13.5 257 187-475 245-503 (593)
390 PLN03225 Serine/threonine-prot 100.0 7.5E-32 1.6E-36 281.4 17.6 262 190-481 130-449 (566)
391 KOG1027 Serine/threonine prote 100.0 3.5E-32 7.7E-37 275.7 9.1 247 194-481 511-766 (903)
392 KOG1290 Serine/threonine prote 100.0 1.1E-30 2.4E-35 250.3 18.8 133 192-346 78-222 (590)
393 PLN03224 probable serine/threo 100.0 1.5E-30 3.2E-35 265.3 21.0 276 191-481 144-499 (507)
394 KOG0670 U4/U6-associated splic 100.0 7.1E-32 1.5E-36 259.8 9.6 260 191-481 431-745 (752)
395 KOG1152 Signal transduction se 100.0 1.4E-31 3E-36 260.8 9.9 203 193-414 562-769 (772)
396 KOG0664 Nemo-like MAPK-related 100.0 3.1E-32 6.7E-37 243.2 3.4 264 194-482 55-343 (449)
397 KOG0668 Casein kinase II, alph 100.0 1.8E-30 4E-35 226.4 11.7 258 190-481 36-321 (338)
398 KOG0665 Jun-N-terminal kinase 100.0 5.7E-30 1.2E-34 233.9 8.0 262 191-481 16-309 (369)
399 cd00180 PKc Catalytic domain o 100.0 5.5E-28 1.2E-32 221.2 20.6 212 200-482 1-214 (215)
400 KOG1345 Serine/threonine kinas 100.0 4.2E-29 9.1E-34 223.1 11.9 252 189-479 21-281 (378)
401 KOG0576 Mitogen-activated prot 100.0 7.2E-30 1.6E-34 252.8 6.3 253 191-481 14-270 (829)
402 KOG1167 Serine/threonine prote 99.9 3.1E-28 6.6E-33 230.6 9.7 199 192-417 36-281 (418)
403 smart00221 STYKc Protein kinas 99.9 6.7E-27 1.5E-31 217.0 18.6 200 194-416 1-202 (225)
404 PLN00181 protein SPA1-RELATED; 99.9 2.2E-27 4.9E-32 259.8 11.9 196 261-481 28-264 (793)
405 smart00750 KIND kinase non-cat 99.9 1.3E-25 2.8E-30 200.8 14.0 166 290-485 1-168 (176)
406 PRK09188 serine/threonine prot 99.9 2.3E-24 5E-29 211.0 13.8 169 192-387 18-193 (365)
407 KOG0195 Integrin-linked kinase 99.9 8.5E-25 1.8E-29 195.6 9.5 251 194-487 192-447 (448)
408 KOG1165 Casein kinase (serine/ 99.9 1.9E-23 4.2E-28 192.1 15.8 200 193-417 29-239 (449)
409 KOG1163 Casein kinase (serine/ 99.9 4.6E-24 9.9E-29 187.9 10.9 263 190-486 13-284 (341)
410 KOG1164 Casein kinase (serine/ 99.9 2.7E-23 5.8E-28 203.8 17.2 261 193-486 19-297 (322)
411 KOG0590 Checkpoint kinase and 99.9 2.6E-24 5.6E-29 224.2 7.2 261 195-481 321-584 (601)
412 COG0515 SPS1 Serine/threonine 99.9 1E-21 2.2E-26 192.2 23.5 264 194-481 2-274 (384)
413 cd05147 RIO1_euk RIO kinase fa 99.9 1.8E-21 3.8E-26 175.5 13.2 155 197-362 2-167 (190)
414 KOG1240 Protein kinase contain 99.9 2.3E-22 5E-27 209.8 6.4 249 193-485 24-294 (1431)
415 PF14531 Kinase-like: Kinase-l 99.9 2.1E-21 4.5E-26 182.3 11.2 238 193-473 13-288 (288)
416 KOG1023 Natriuretic peptide re 99.9 4.1E-21 8.9E-26 191.4 13.8 217 259-486 1-224 (484)
417 PRK10359 lipopolysaccharide co 99.9 1.5E-21 3.2E-26 178.0 8.6 181 190-409 29-217 (232)
418 PRK12274 serine/threonine prot 99.8 2.5E-20 5.5E-25 166.3 12.8 191 195-417 5-210 (218)
419 cd05145 RIO1_like RIO kinase f 99.8 5.4E-20 1.2E-24 166.4 14.2 155 197-364 2-169 (190)
420 KOG0603 Ribosomal protein S6 k 99.8 2.9E-21 6.4E-26 192.4 1.7 229 199-476 1-232 (612)
421 KOG1166 Mitotic checkpoint ser 99.8 1.3E-18 2.8E-23 185.2 15.8 195 190-411 696-900 (974)
422 PRK10345 hypothetical protein; 99.8 2.2E-18 4.8E-23 156.8 12.7 136 195-359 5-156 (210)
423 KOG4158 BRPK/PTEN-induced prot 99.8 5.7E-18 1.2E-22 159.6 11.4 198 263-484 274-512 (598)
424 smart00090 RIO RIO-like kinase 99.8 9.6E-18 2.1E-22 156.3 13.0 163 188-362 24-198 (237)
425 TIGR03724 arch_bud32 Kae1-asso 99.7 1.3E-17 2.9E-22 152.1 12.5 139 199-362 1-139 (199)
426 PRK14879 serine/threonine prot 99.7 1.9E-17 4.1E-22 152.5 13.0 142 198-361 2-143 (211)
427 KOG0606 Microtubule-associated 99.7 4.8E-18 1E-22 177.7 8.5 212 191-476 82-306 (1205)
428 KOG1033 eIF-2alpha kinase PEK/ 99.7 1E-18 2.2E-23 171.2 2.9 173 279-477 330-507 (516)
429 PRK09605 bifunctional UGMP fam 99.7 4.8E-17 1E-21 170.3 13.4 142 194-361 335-476 (535)
430 cd05144 RIO2_C RIO kinase fami 99.7 1.5E-16 3.2E-21 145.0 12.7 153 193-364 16-177 (198)
431 KOG0590 Checkpoint kinase and 99.7 5.1E-18 1.1E-22 177.2 -0.6 258 193-480 21-284 (601)
432 PRK01723 3-deoxy-D-manno-octul 99.6 2E-15 4.3E-20 141.1 13.2 147 198-361 37-191 (239)
433 cd05120 APH_ChoK_like Aminogly 99.6 4E-15 8.6E-20 128.8 10.6 135 196-361 2-138 (155)
434 cd05119 RIO RIO kinase family, 99.6 8.5E-15 1.8E-19 132.1 11.3 152 197-364 2-166 (187)
435 KOG1266 Protein kinase [Signal 99.6 8.6E-15 1.9E-19 135.3 8.3 205 257-481 119-330 (458)
436 KOG0601 Cyclin-dependent kinas 99.4 1.1E-13 2.4E-18 138.5 6.7 253 192-481 114-378 (524)
437 TIGR01982 UbiB 2-polyprenylphe 99.4 1.2E-12 2.5E-17 133.0 14.2 156 198-364 123-309 (437)
438 KOG1243 Protein kinase [Genera 99.4 1.1E-11 2.3E-16 125.7 17.3 166 215-410 34-199 (690)
439 PRK04750 ubiB putative ubiquin 99.3 6.6E-12 1.4E-16 129.0 11.9 162 194-365 122-317 (537)
440 cd05146 RIO3_euk RIO kinase fa 99.3 2.8E-11 6.1E-16 108.2 12.5 154 198-363 3-175 (197)
441 COG3642 Mn2+-dependent serine/ 99.3 3.3E-11 7.2E-16 104.0 11.7 139 198-361 2-140 (204)
442 KOG0606 Microtubule-associated 99.3 5.1E-12 1.1E-16 133.2 7.4 252 192-477 804-1084(1205)
443 KOG3087 Serine/threonine prote 99.3 6E-11 1.3E-15 101.9 12.1 151 196-361 11-165 (229)
444 cd05151 ChoK Choline Kinase (C 99.3 1.4E-11 3E-16 109.1 8.8 130 197-360 3-135 (170)
445 KOG0601 Cyclin-dependent kinas 99.2 8.3E-12 1.8E-16 125.3 6.7 245 192-481 265-513 (524)
446 cd05154 ACAD10_11_like Acyl-Co 99.0 1.9E-09 4.2E-14 99.7 10.4 143 198-361 4-206 (223)
447 PF01163 RIO1: RIO1 family; I 99.0 7.4E-09 1.6E-13 92.3 13.2 142 207-363 1-157 (188)
448 PRK15123 lipopolysaccharide co 98.9 1.9E-08 4.1E-13 95.2 13.5 147 203-361 33-194 (268)
449 COG0478 RIO-like serine/threon 98.8 3.7E-08 8E-13 90.5 12.2 149 194-361 93-251 (304)
450 COG4248 Uncharacterized protei 98.8 5.1E-08 1.1E-12 94.1 12.7 198 280-486 85-300 (637)
451 KOG2137 Protein kinase [Signal 98.8 1.4E-09 3E-14 111.0 1.9 149 317-480 107-263 (700)
452 KOG3741 Poly(A) ribonuclease s 98.7 1.6E-07 3.4E-12 93.0 13.4 218 205-483 289-522 (655)
453 COG0661 AarF Predicted unusual 98.7 5.7E-08 1.2E-12 99.5 8.6 157 198-365 131-318 (517)
454 PF06293 Kdo: Lipopolysacchari 98.6 2.5E-07 5.5E-12 84.5 10.5 105 250-361 56-170 (206)
455 PF06176 WaaY: Lipopolysacchar 98.6 7E-07 1.5E-11 80.5 12.7 148 191-360 30-182 (229)
456 PRK09902 hypothetical protein; 98.5 9.9E-07 2.1E-11 79.3 11.7 147 198-361 24-179 (216)
457 KOG4658 Apoptotic ATPase [Sign 98.2 6.1E-07 1.3E-11 98.0 3.4 117 25-141 3-136 (889)
458 TIGR02172 Fb_sc_TIGR02172 Fibr 98.2 1.3E-05 2.7E-10 74.4 11.6 140 198-360 7-181 (226)
459 KOG1235 Predicted unusual prot 98.2 1.1E-05 2.4E-10 82.6 11.6 156 198-365 167-358 (538)
460 KOG1035 eIF-2alpha kinase GCN2 98.2 3.4E-05 7.4E-10 83.8 14.5 198 249-482 226-434 (1351)
461 COG1718 RIO1 Serine/threonine 98.2 2.4E-05 5.1E-10 71.6 11.3 152 199-364 55-218 (268)
462 PF01636 APH: Phosphotransfera 98.0 7E-05 1.5E-09 69.5 12.2 144 197-360 2-196 (239)
463 PF13095 FTA2: Kinetochore Sim 98.0 6.4E-05 1.4E-09 67.2 10.3 140 192-359 37-206 (207)
464 KOG0576 Mitogen-activated prot 98.0 1.1E-06 2.3E-11 89.4 -1.1 187 193-415 243-431 (829)
465 cd05150 APH Aminoglycoside 3'- 98.0 8.1E-05 1.7E-09 70.0 11.6 140 200-360 6-192 (244)
466 COG2112 Predicted Ser/Thr prot 97.9 3.6E-05 7.9E-10 66.5 7.8 130 194-361 24-155 (201)
467 PF12260 PIP49_C: Protein-kina 97.9 4.8E-05 1.1E-09 68.1 8.0 104 254-362 8-112 (188)
468 PLN02876 acyl-CoA dehydrogenas 97.8 0.00018 3.8E-09 79.7 12.6 82 197-292 43-131 (822)
469 PF10707 YrbL-PhoP_reg: PhoP r 97.8 0.00048 1E-08 62.1 13.1 144 197-358 6-169 (199)
470 cd05155 APH_ChoK_like_1 Unchar 97.7 0.00026 5.6E-09 66.2 9.6 32 329-360 162-193 (235)
471 PRK10593 hypothetical protein; 97.4 0.0024 5.2E-08 61.8 12.3 79 194-292 16-100 (297)
472 KOG1826 Ras GTPase activating 97.3 7.8E-05 1.7E-09 83.0 1.6 161 252-414 1276-1440(2724)
473 cd05157 ETNK_euk Ethanolamine 97.3 0.004 8.8E-08 58.0 12.9 32 330-361 169-201 (235)
474 PRK09550 mtnK methylthioribose 97.3 0.0027 5.8E-08 63.5 12.1 82 198-291 32-117 (401)
475 KOG2268 Serine/threonine prote 97.3 0.00033 7.2E-09 66.4 4.9 150 193-362 93-252 (465)
476 TIGR00938 thrB_alt homoserine 97.2 0.0033 7.1E-08 61.3 11.5 33 329-361 185-217 (307)
477 cd05153 HomoserineK_II Homoser 97.2 0.0015 3.2E-08 63.3 8.8 32 330-361 174-205 (296)
478 TIGR02721 ycfN_thiK thiamine k 97.1 0.0041 8.9E-08 58.8 10.4 30 331-361 146-175 (256)
479 PRK05231 homoserine kinase; Pr 97.1 0.014 2.9E-07 57.3 14.3 32 330-361 186-217 (319)
480 cd05156 ChoK_euk Choline Kinas 96.6 0.014 3E-07 56.7 10.3 31 330-360 178-212 (302)
481 TIGR01767 MTRK 5-methylthiorib 96.6 0.02 4.3E-07 56.2 10.9 34 329-363 190-223 (370)
482 KOG2270 Serine/threonine prote 96.2 0.049 1.1E-06 53.0 10.6 160 195-365 147-317 (520)
483 cd05152 MPH2' Macrolide 2'-Pho 96.2 0.045 9.8E-07 52.3 10.6 32 330-361 184-216 (276)
484 COG3001 Uncharacterized protei 96.1 0.077 1.7E-06 48.4 10.7 78 195-293 19-99 (286)
485 COG3173 Predicted aminoglycosi 96.1 0.06 1.3E-06 52.1 10.8 36 329-364 196-231 (321)
486 PF03881 Fructosamin_kin: Fruc 96.1 0.037 8E-07 53.1 9.4 76 194-290 19-97 (288)
487 PLN02756 S-methyl-5-thioribose 95.9 0.085 1.9E-06 52.8 11.5 80 197-289 37-119 (418)
488 TIGR02906 spore_CotS spore coa 95.8 0.18 3.9E-06 49.0 13.4 30 330-360 186-215 (313)
489 PRK12396 5-methylribose kinase 95.8 0.032 6.8E-07 55.6 7.6 81 197-289 34-117 (409)
490 TIGR02904 spore_ysxE spore coa 95.5 0.22 4.9E-06 48.4 12.5 32 330-361 195-226 (309)
491 KOG1093 Predicted protein kina 95.5 0.025 5.3E-07 57.3 5.6 47 251-298 28-75 (725)
492 PLN02236 choline kinase 95.4 0.13 2.8E-06 51.0 10.6 33 329-361 198-231 (344)
493 COG5072 ALK1 Serine/threonine 95.0 0.071 1.5E-06 51.9 6.9 75 276-362 297-371 (488)
494 PF05659 RPW8: Arabidopsis bro 94.9 0.59 1.3E-05 39.8 11.7 107 20-127 4-111 (147)
495 PLN02421 phosphotransferase, a 94.7 0.15 3.2E-06 50.3 8.6 31 332-362 183-214 (330)
496 PF12061 DUF3542: Protein of u 94.6 0.072 1.6E-06 50.1 5.8 80 25-104 296-376 (402)
497 KOG1236 Predicted unusual prot 94.6 0.1 2.2E-06 51.6 7.1 60 281-347 321-380 (565)
498 PRK11768 serine/threonine prot 94.2 1.1 2.5E-05 43.9 13.7 30 330-361 195-224 (325)
499 PRK06148 hypothetical protein; 93.5 0.89 1.9E-05 51.8 12.8 32 330-361 202-236 (1013)
500 PRK10271 thiK thiamine kinase; 92.1 0.12 2.6E-06 46.0 2.7 29 332-361 78-106 (188)
No 1
>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]
Probab=100.00 E-value=2.1e-50 Score=375.98 Aligned_cols=254 Identities=29% Similarity=0.437 Sum_probs=214.9
Q ss_pred ccccccccccccceeEEEEEecCCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCCCCccccce
Q 011360 193 CFASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQIRHRNILPLLA 272 (487)
Q Consensus 193 ~~~~~~~lg~G~~g~v~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~ 272 (487)
+++.+..||+|..|+||++.++ .+++.+|+|++.. ...+...+++.+|+++++..+||+||.+||
T Consensus 80 dle~~~~lG~G~gG~V~kv~Hk-~t~~i~AlK~I~~--------------~~~~~~~~Qi~rEl~il~~~~spyIV~~yg 144 (364)
T KOG0581|consen 80 DLERLGVLGSGNGGTVYKVRHK-PTGKIYALKVILL--------------NIDPALQKQILRELEILRSCQSPYIVGFYG 144 (364)
T ss_pred HhhhhhhcccCCCcEEEEEEEc-CCCeEEEEEeecc--------------cCCHHHHHHHHHHHHHHhhCCCCCeeeEeE
Confidence 5788899999999999999864 6899999999833 345667889999999999999999999999
Q ss_pred EEecCC-eeEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCCE
Q 011360 273 HMVRPD-CHLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVLLNDDMEA 351 (487)
Q Consensus 273 ~~~~~~-~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nill~~~~~~ 351 (487)
.|..+. .++|+||||++|||.+++.. .+.+++...-+++.++++||.||| ++++||||||||+|||++..|+|
T Consensus 145 aF~~~~~~isI~mEYMDgGSLd~~~k~----~g~i~E~~L~~ia~~VL~GL~YLh--~~~~IIHRDIKPsNlLvNskGeV 218 (364)
T KOG0581|consen 145 AFYSNGEEISICMEYMDGGSLDDILKR----VGRIPEPVLGKIARAVLRGLSYLH--EERKIIHRDIKPSNLLVNSKGEV 218 (364)
T ss_pred EEEeCCceEEeehhhcCCCCHHHHHhh----cCCCCHHHHHHHHHHHHHHHHHHh--hccCeeeccCCHHHeeeccCCCE
Confidence 999998 49999999999999999975 367999999999999999999996 34679999999999999999999
Q ss_pred EEeccCCccccCCCCceeeEeeecccccccCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCccccCCCCccccHHHHHH
Q 011360 352 CISDLGLAMAIPDGYTRVLISYVLGTMAYIAPEYFQQPELSEKCDIFSFGMLLISLVRGVPSFVFHQNGEEICSPEWLRK 431 (487)
Q Consensus 352 kl~DFg~s~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DvwslG~~l~elltg~~pf~~~~~~~~~~~~~~~~~ 431 (487)
||||||.|..+... ...+++||..|||||.+.+..|+.++||||||++++|+.+|+.||..... ......+.+..
T Consensus 219 KicDFGVS~~lvnS----~a~tfvGT~~YMsPERi~g~~Ys~~sDIWSLGLsllE~a~GrfP~~~~~~-~~~~~~~Ll~~ 293 (364)
T KOG0581|consen 219 KICDFGVSGILVNS----IANTFVGTSAYMSPERISGESYSVKSDIWSLGLSLLELAIGRFPYPPPNP-PYLDIFELLCA 293 (364)
T ss_pred EeccccccHHhhhh----hcccccccccccChhhhcCCcCCcccceecccHHHHHHhhCCCCCCCcCC-CCCCHHHHHHH
Confidence 99999999877554 34678899999999999999999999999999999999999999966521 12233444544
Q ss_pred HHhcCCCCCccCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCChHHHHH
Q 011360 432 VMNSKNPSRAIDPRLPGNGYEKKMLHVLKIAYICTLHDPEERPNSQYVRC 481 (487)
Q Consensus 432 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~~il~ 481 (487)
+..+..| ++|.. ..+.++..++..||++||.+|||++++++
T Consensus 294 Iv~~ppP------~lP~~---~fS~ef~~FV~~CL~Kdp~~R~s~~qLl~ 334 (364)
T KOG0581|consen 294 IVDEPPP------RLPEG---EFSPEFRSFVSCCLRKDPSERPSAKQLLQ 334 (364)
T ss_pred HhcCCCC------CCCcc---cCCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 4433322 23332 34467999999999999999999999875
No 2
>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=100.00 E-value=2e-48 Score=365.58 Aligned_cols=249 Identities=27% Similarity=0.406 Sum_probs=202.9
Q ss_pred cccccccccccccceeEEEEEecCCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCCCCccccc
Q 011360 192 DCFASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQIRHRNILPLL 271 (487)
Q Consensus 192 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~ 271 (487)
.+|...+.||+|+||+||+|++. .++..||||.+.. ........+.+..|+.+++.++|||||+++
T Consensus 10 ~~y~~~~~iG~GsfavVykg~h~-~~~~~VAIK~i~~-------------~~l~~k~~e~L~~Ei~iLkel~H~nIV~l~ 75 (429)
T KOG0595|consen 10 GDYELSREIGSGSFAVVYKGRHK-KSGTEVAIKCIAK-------------KKLNKKLVELLLSEIKILKELKHPNIVRLL 75 (429)
T ss_pred ccceehhhccCcceEEEEEeEec-cCCceEEeeeehh-------------hccCHHHHHHHHHHHHHHHhcCCcceeeEE
Confidence 35888899999999999999875 4669999999832 233556677889999999999999999999
Q ss_pred eEEecCCeeEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCC---
Q 011360 272 AHMVRPDCHLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVLLNDD--- 348 (487)
Q Consensus 272 ~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nill~~~--- 348 (487)
+++..++.+|+|||||.||+|.+|+.. .+.+++.+++.++.|++.||++| |+++||||||||.|||++..
T Consensus 76 d~~~~~~~i~lVMEyC~gGDLs~yi~~----~~~l~e~t~r~Fm~QLA~alq~L---~~~~IiHRDLKPQNiLLs~~~~~ 148 (429)
T KOG0595|consen 76 DCIEDDDFIYLVMEYCNGGDLSDYIRR----RGRLPEATARHFMQQLASALQFL---HENNIIHRDLKPQNILLSTTARN 148 (429)
T ss_pred EEEecCCeEEEEEEeCCCCCHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHH---HHCCeeeccCCcceEEeccCCCC
Confidence 999999999999999999999999986 45899999999999999999999 77779999999999999864
Q ss_pred ---CCEEEeccCCccccCCCCceeeEeeecccccccCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCccccCCCCcccc
Q 011360 349 ---MEACISDLGLAMAIPDGYTRVLISYVLGTMAYIAPEYFQQPELSEKCDIFSFGMLLISLVRGVPSFVFHQNGEEICS 425 (487)
Q Consensus 349 ---~~~kl~DFg~s~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DvwslG~~l~elltg~~pf~~~~~~~~~~~ 425 (487)
-.+||+|||+|+.+..+... .+.+|+|-|||||++....|+.|+|+||+|+++|++++|++||.. .+.
T Consensus 149 ~~~~~LKIADFGfAR~L~~~~~a---~tlcGSplYMAPEV~~~~~YdAKADLWSiG~Ilyq~l~g~~Pf~a------~t~ 219 (429)
T KOG0595|consen 149 DTSPVLKIADFGFARFLQPGSMA---ETLCGSPLYMAPEVIMSQQYDAKADLWSIGTILYQCLTGKPPFDA------ETP 219 (429)
T ss_pred CCCceEEecccchhhhCCchhHH---HHhhCCccccCHHHHHhccccchhhHHHHHHHHHHHHhCCCCccc------cCH
Confidence 45899999999998765433 578899999999999999999999999999999999999999933 233
Q ss_pred HHHHHHHHhcCCCCCccCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCChHH
Q 011360 426 PEWLRKVMNSKNPSRAIDPRLPGNGYEKKMLHVLKIAYICTLHDPEERPNSQY 478 (487)
Q Consensus 426 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~~ 478 (487)
.+.+..+-.+......+...+. ..+.+++...++.+|.+|-++.+
T Consensus 220 ~eL~~~~~k~~~~~~~~~~~~s--------~~~~~Ll~~ll~~~~~~~~~~~~ 264 (429)
T KOG0595|consen 220 KELLLYIKKGNEIVPVLPAELS--------NPLRELLISLLQRNPKDRISFED 264 (429)
T ss_pred HHHHHHHhccccccCchhhhcc--------CchhhhhhHHHhcCccccCchHH
Confidence 3444444333333222222222 22456666677777777776654
No 3
>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]
Probab=100.00 E-value=4.4e-48 Score=377.86 Aligned_cols=256 Identities=31% Similarity=0.454 Sum_probs=207.5
Q ss_pred ccccccccccccceeEEEEEecCCCCce-EEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCCCCccccc
Q 011360 193 CFASLEKIGSGGCGEVYKAELPGSNGKM-IAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQIRHRNILPLL 271 (487)
Q Consensus 193 ~~~~~~~lg~G~~g~v~~~~~~~~~~~~-vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~ 271 (487)
.+...+.+|.|+||+||+|.|+ |.. ||||++.. ........+.|.+|+.++.+++|||||+++
T Consensus 42 ~l~~~~~iG~G~~g~V~~~~~~---g~~~vavK~~~~-------------~~~~~~~~~~f~~E~~il~~l~HpNIV~f~ 105 (362)
T KOG0192|consen 42 ELPIEEVLGSGSFGTVYKGKWR---GTDVVAVKIISD-------------PDFDDESRKAFRREASLLSRLRHPNIVQFY 105 (362)
T ss_pred HhhhhhhcccCCceeEEEEEeC---CceeEEEEEecc-------------hhcChHHHHHHHHHHHHHHhCCCCCeeeEE
Confidence 3555667999999999999984 445 99998832 111222277899999999999999999999
Q ss_pred eEEecCC-eeEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCC-eeecCCCCCCEEeCCCC
Q 011360 272 AHMVRPD-CHLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSAS-IIHGDIKPRNVLLNDDM 349 (487)
Q Consensus 272 ~~~~~~~-~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~g-ivH~Dlkp~Nill~~~~ 349 (487)
|++..+. .+++||||+++|+|.+++... ....+++..+..++.||++||.|| |+++ ||||||||+|||++.++
T Consensus 106 G~~~~~~~~~~iVtEy~~~GsL~~~l~~~--~~~~l~~~~~l~~aldiArGm~YL---H~~~~iIHrDLK~~NiLv~~~~ 180 (362)
T KOG0192|consen 106 GACTSPPGSLCIVTEYMPGGSLSVLLHKK--RKRKLPLKVRLRIALDIARGMEYL---HSEGPIIHRDLKSDNILVDLKG 180 (362)
T ss_pred EEEcCCCCceEEEEEeCCCCcHHHHHhhc--ccCCCCHHHHHHHHHHHHHHHHHH---hcCCCeeecccChhhEEEcCCC
Confidence 9999887 799999999999999999752 467899999999999999999999 7778 99999999999999998
Q ss_pred -CEEEeccCCccccCCCCceeeEeeecccccccCCcccC--CCCCCchhHHHHHHHHHHHHHhCCCCccccCCCCccccH
Q 011360 350 -EACISDLGLAMAIPDGYTRVLISYVLGTMAYIAPEYFQ--QPELSEKCDIFSFGMLLISLVRGVPSFVFHQNGEEICSP 426 (487)
Q Consensus 350 -~~kl~DFg~s~~~~~~~~~~~~~~~~gt~~y~aPE~l~--~~~~~~~~DvwslG~~l~elltg~~pf~~~~~~~~~~~~ 426 (487)
++||+|||+++...... ...+...||+.|||||++. ...|+.|+||||||+++|||+||+.||....+ .
T Consensus 181 ~~~KI~DFGlsr~~~~~~--~~~~~~~GT~~wMAPEv~~~~~~~~~~K~DvySFgIvlWEl~t~~~Pf~~~~~------~ 252 (362)
T KOG0192|consen 181 KTLKIADFGLSREKVISK--TSMTSVAGTYRWMAPEVLRGEKSPYTEKSDVYSFGIVLWELLTGEIPFEDLAP------V 252 (362)
T ss_pred CEEEECCCccceeecccc--ccccCCCCCccccChhhhcCCCCcCCccchhhhHHHHHHHHHHCCCCCCCCCH------H
Confidence 99999999998765432 1123367999999999999 56999999999999999999999999944332 1
Q ss_pred HHHHHHHhcCCCCCccCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCChHHHHHHHhhh
Q 011360 427 EWLRKVMNSKNPSRAIDPRLPGNGYEKKMLHVLKIAYICTLHDPEERPNSQYVRCRLSQL 486 (487)
Q Consensus 427 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~~il~~L~~l 486 (487)
.....+.. ...+..++..+ ...+..++.+||+.||+.||++.+|+..|+.+
T Consensus 253 ~~~~~v~~-~~~Rp~~p~~~--------~~~l~~l~~~CW~~dp~~RP~f~ei~~~l~~~ 303 (362)
T KOG0192|consen 253 QVASAVVV-GGLRPPIPKEC--------PPHLSSLMERCWLVDPSRRPSFLEIVSRLESI 303 (362)
T ss_pred HHHHHHHh-cCCCCCCCccC--------CHHHHHHHHHhCCCCCCcCCCHHHHHHHHHHH
Confidence 22222322 22222222222 35688999999999999999999999999865
No 4
>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=4e-48 Score=380.59 Aligned_cols=251 Identities=27% Similarity=0.400 Sum_probs=212.9
Q ss_pred cccccccccccccceeEEEEEecCCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCCCCccccc
Q 011360 192 DCFASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQIRHRNILPLL 271 (487)
Q Consensus 192 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~ 271 (487)
..|...+.||+|||..||.++. ..+|..||+|++.. ....+....+.+.+|+++.++|+|||||+++
T Consensus 18 ~~Y~~g~~LGkGgFA~cYe~~~-~~tge~~A~KvVpk------------~~l~k~~~reKv~~EIeIHr~L~HpnIV~f~ 84 (592)
T KOG0575|consen 18 KRYKRGRFLGKGGFARCYEARD-LDTGEVVAVKVVPK------------KLLKKPKQREKVLNEIEIHRSLKHPNIVQFY 84 (592)
T ss_pred ceeeeeeeeccCcceEEEEEEE-cCCCcEEEEEEeeh------------HHhcCcchHHHHHHHHHHHHhcCCCcEEeee
Confidence 4699999999999999999974 46899999999832 2334556677889999999999999999999
Q ss_pred eEEecCCeeEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCCE
Q 011360 272 AHMVRPDCHLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVLLNDDMEA 351 (487)
Q Consensus 272 ~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nill~~~~~~ 351 (487)
++|++.+++|||.|+|..++|..+++. .+++++..++.++.||+.||.|| |+++|+|||||..|+|++++.++
T Consensus 85 ~~FEDs~nVYivLELC~~~sL~el~Kr----rk~ltEpEary~l~QIv~GlkYL---H~~~IiHRDLKLGNlfL~~~~~V 157 (592)
T KOG0575|consen 85 HFFEDSNNVYIVLELCHRGSLMELLKR----RKPLTEPEARYFLRQIVEGLKYL---HSLGIIHRDLKLGNLFLNENMNV 157 (592)
T ss_pred eEeecCCceEEEEEecCCccHHHHHHh----cCCCCcHHHHHHHHHHHHHHHHH---HhcCceecccchhheeecCcCcE
Confidence 999999999999999999999999874 68899999999999999999999 88899999999999999999999
Q ss_pred EEeccCCccccCCCCceeeEeeecccccccCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCccccCCCCccccHHHHHH
Q 011360 352 CISDLGLAMAIPDGYTRVLISYVLGTMAYIAPEYFQQPELSEKCDIFSFGMLLISLVRGVPSFVFHQNGEEICSPEWLRK 431 (487)
Q Consensus 352 kl~DFg~s~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DvwslG~~l~elltg~~pf~~~~~~~~~~~~~~~~~ 431 (487)
||+|||+|..+....... .+.+|||.|.|||++....++..+||||+||++|-|++|+|||... ...+-...
T Consensus 158 KIgDFGLAt~le~~~Erk--~TlCGTPNYIAPEVl~k~gHsfEvDiWSlGcvmYtLL~G~PPFetk------~vkety~~ 229 (592)
T KOG0575|consen 158 KIGDFGLATQLEYDGERK--KTLCGTPNYIAPEVLNKSGHSFEVDIWSLGCVMYTLLVGRPPFETK------TVKETYNK 229 (592)
T ss_pred EecccceeeeecCccccc--ceecCCCcccChhHhccCCCCCchhhhhhhhHHHhhhhCCCCcccc------hHHHHHHH
Confidence 999999999886543332 5789999999999999999999999999999999999999999332 22222333
Q ss_pred HHhcCCCCCccCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCChHHHHH
Q 011360 432 VMNSKNPSRAIDPRLPGNGYEKKMLHVLKIAYICTLHDPEERPNSQYVRC 481 (487)
Q Consensus 432 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~~il~ 481 (487)
+... +. .+|. ..+....+||..+|++||.+|||+.+|+.
T Consensus 230 Ik~~-~Y------~~P~----~ls~~A~dLI~~lL~~~P~~Rpsl~~vL~ 268 (592)
T KOG0575|consen 230 IKLN-EY------SMPS----HLSAEAKDLIRKLLRPNPSERPSLDEVLD 268 (592)
T ss_pred HHhc-Cc------cccc----ccCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 3222 11 1222 23345889999999999999999999985
No 5
>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=7.9e-49 Score=381.81 Aligned_cols=358 Identities=23% Similarity=0.328 Sum_probs=256.8
Q ss_pred hhccchhhhhhhhhHHHHHHhhh----chhhhhhHHHHHH----------HHHHHHHHHHhhccccCCCC-cc--ccccc
Q 011360 89 LACDVDYLLDEFQTEAFQTMLLQ----DADAMSKVKEVNA----------RLQDIAWQINVLGLKESFGG-KS--RNVRQ 151 (487)
Q Consensus 89 ~~yd~~~~~~~~~~~~~~~~l~~----~~~~~~r~~ei~~----------~l~~i~~~~~~~~l~~~~g~-~~--~~~~~ 151 (487)
-+.|-++.+..+.++..++.+.. .+-|.+|-++-.. ........+.|+.+....++ .. ...+.
T Consensus 77 ~l~~~~Wf~~~isR~~ae~~ll~p~~~~G~flvR~se~~~g~yslsv~~~~~~~~~~~v~hyri~~~~~~~~~~~~~~~~ 156 (468)
T KOG0197|consen 77 KLSDEPWFFGKISREEAERQLLAPENKEGAFLVRESESDKGDYSLSVREGDSGGLGAKVKHYRIRQLDGGGLYPYIDERE 156 (468)
T ss_pred ccccCCchhccccHHHHHHhhcCCCCCccceeeecccCCcCCeeEEEEeccccCCccceeeeeeeEcCCCCeecCCCHHH
Confidence 35566777888888887754432 2445544332110 00001223344555444333 23 44455
Q ss_pred CCCCCChhhhhhhcCCCC--C--CCCcccc--CCcchh---hHHHhhhccccccccccccccceeEEEEEecCCCCceEE
Q 011360 152 RFPTTPSLISAAVRGGSR--D--RGPTIFS--PLIEKE---DLAFLKKEDCFASLEKIGSGGCGEVYKAELPGSNGKMIA 222 (487)
Q Consensus 152 ~~~s~p~~~~~~~~~~~~--~--~~~~~~~--~~~~~~---~~~~~~~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~va 222 (487)
.|++.+.++......... . ..+.... ..+... ...|......+..++.||+|.||.||.|.|+ ....||
T Consensus 157 ~F~~l~~lv~~~~~~~~gl~~~l~~p~~~~~~~~p~~~~~~~d~wei~r~~l~l~~~LG~G~FG~V~~g~~~--~~~~va 234 (468)
T KOG0197|consen 157 LFSSLQQLVNYYSKNADGLCTRLRDPCSKQGHTKPQTPDLARDPWEIPREELKLIRELGSGQFGEVWLGKWN--GSTKVA 234 (468)
T ss_pred hhhhHHHHHhhhhccCcchhhcccCchhccCCCCCCCCccccCCeeecHHHHHHHHHhcCCccceEEEEEEc--CCCccc
Confidence 566666665544332211 1 1111110 111111 2234444556888999999999999999996 444899
Q ss_pred EEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCCCCccccceEEecCCeeEEEEEecCCCCHHHHHhhhhcC
Q 011360 223 IKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQIRHRNILPLLAHMVRPDCHLLVYEFMKNGSLQDILDDVSRG 302 (487)
Q Consensus 223 vK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~ 302 (487)
+|.+.. .......|.+|+++|.+|+|+|||++++++..++++|||||||+.|+|.+||.. ..
T Consensus 235 vk~ik~----------------~~m~~~~f~~Ea~iMk~L~H~~lV~l~gV~~~~~piyIVtE~m~~GsLl~yLr~--~~ 296 (468)
T KOG0197|consen 235 VKTIKE----------------GSMSPEAFLREAQIMKKLRHEKLVKLYGVCTKQEPIYIVTEYMPKGSLLDYLRT--RE 296 (468)
T ss_pred ceEEec----------------cccChhHHHHHHHHHHhCcccCeEEEEEEEecCCceEEEEEecccCcHHHHhhh--cC
Confidence 998843 122345677999999999999999999999999999999999999999999986 56
Q ss_pred CCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCCEEEeccCCccccCCCCceeeEeeecccccccC
Q 011360 303 RRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVLLNDDMEACISDLGLAMAIPDGYTRVLISYVLGTMAYIA 382 (487)
Q Consensus 303 ~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nill~~~~~~kl~DFg~s~~~~~~~~~~~~~~~~gt~~y~a 382 (487)
+..+...+.+.++.|||+|++|| +++++|||||.++||||+++..+||+|||+++...++..... ....-++.|+|
T Consensus 297 ~~~l~~~~Ll~~a~qIaeGM~YL---es~~~IHRDLAARNiLV~~~~~vKIsDFGLAr~~~d~~Y~~~-~~~kfPIkWtA 372 (468)
T KOG0197|consen 297 GGLLNLPQLLDFAAQIAEGMAYL---ESKNYIHRDLAARNILVDEDLVVKISDFGLARLIGDDEYTAS-EGGKFPIKWTA 372 (468)
T ss_pred CCccchHHHHHHHHHHHHHHHHH---HhCCccchhhhhhheeeccCceEEEcccccccccCCCceeec-CCCCCCceecC
Confidence 78899999999999999999999 788899999999999999999999999999996554443322 23335789999
Q ss_pred CcccCCCCCCchhHHHHHHHHHHHHHh-CCCCccccCCCCccccHHHHHHHHhcCCCCCccCCCCCCCCcHHHHHHHHHH
Q 011360 383 PEYFQQPELSEKCDIFSFGMLLISLVR-GVPSFVFHQNGEEICSPEWLRKVMNSKNPSRAIDPRLPGNGYEKKMLHVLKI 461 (487)
Q Consensus 383 PE~l~~~~~~~~~DvwslG~~l~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 461 (487)
||.+..+.++.||||||||++||||+| |+.||... ...+.+..+..+.+... |.. ++..+.++
T Consensus 373 PEa~~~~~FS~kSDVWSFGVlL~E~fT~G~~py~~m------sn~ev~~~le~GyRlp~------P~~----CP~~vY~l 436 (468)
T KOG0197|consen 373 PEALNYGKFSSKSDVWSFGVLLWELFTYGRVPYPGM------SNEEVLELLERGYRLPR------PEG----CPDEVYEL 436 (468)
T ss_pred HHHHhhCCcccccceeehhhhHHHHhccCCCCCCCC------CHHHHHHHHhccCcCCC------CCC----CCHHHHHH
Confidence 999999999999999999999999999 79998444 34455555555544321 111 23569999
Q ss_pred HhhccCCCCCCCCChHHHHHHHhhh
Q 011360 462 AYICTLHDPEERPNSQYVRCRLSQL 486 (487)
Q Consensus 462 i~~cl~~~P~~RPs~~~il~~L~~l 486 (487)
|..||+.+|++|||++.+...|+++
T Consensus 437 M~~CW~~~P~~RPtF~~L~~~l~~~ 461 (468)
T KOG0197|consen 437 MKSCWHEDPEDRPTFETLREVLEDF 461 (468)
T ss_pred HHHHhhCCcccCCCHHHHHHHHHHh
Confidence 9999999999999999999999876
No 6
>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=5.3e-49 Score=351.80 Aligned_cols=259 Identities=24% Similarity=0.374 Sum_probs=211.6
Q ss_pred ccccccccccccceeEEEEEecCCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCCCCccccce
Q 011360 193 CFASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQIRHRNILPLLA 272 (487)
Q Consensus 193 ~~~~~~~lg~G~~g~v~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~ 272 (487)
.|.+.++||.|.||.||++.+ ..+|..+|.|.+. + .............|+.+|++|+|||||++|+
T Consensus 20 ~y~Il~~IG~GsFg~vykv~~-~~~g~l~a~K~i~-f------------~~md~k~rq~~v~Ei~lLkQL~HpNIVqYy~ 85 (375)
T KOG0591|consen 20 DYQILKKIGRGSFGEVYKVQC-LLDGKLVALKKIQ-F------------GMMDAKARQDCVKEISLLKQLNHPNIVQYYA 85 (375)
T ss_pred HHHHHHHHcCCcchheEEeee-ccCcchhhhhhcc-h------------hhccHHHHHHHHHHHHHHHhcCCchHHHHHH
Confidence 599999999999999999975 4689999999884 2 2233345567889999999999999999998
Q ss_pred -EEecCCe-eEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCC-CeeecCCCCCCEEeCCCC
Q 011360 273 -HMVRPDC-HLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSA-SIIHGDIKPRNVLLNDDM 349 (487)
Q Consensus 273 -~~~~~~~-~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~-givH~Dlkp~Nill~~~~ 349 (487)
.+..+.. ++||||||.+|+|...++.+....+.+++..+++++.|++.||.++|+.-.+ -|+||||||.||+++.+|
T Consensus 86 ~~f~~~~evlnivmE~c~~GDLsqmIk~~K~qkr~ipE~~Vwk~f~QL~~AL~~cH~~~~r~~VmHRDIKPaNIFl~~~g 165 (375)
T KOG0591|consen 86 HSFIEDNEVLNIVMELCDAGDLSQMIKHFKKQKRLIPEKTVWKYFVQLCRALYHCHSKIPRGTVMHRDIKPANIFLTANG 165 (375)
T ss_pred HhhhccchhhHHHHHhhcccCHHHHHHHHHhccccCchHHHHHHHHHHHHHHHHHhccccccceeeccCcchheEEcCCC
Confidence 4444444 8999999999999999999888899999999999999999999999653223 389999999999999999
Q ss_pred CEEEeccCCccccCCCCceeeEeeecccccccCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCccccCCCCccccHHHH
Q 011360 350 EACISDLGLAMAIPDGYTRVLISYVLGTMAYIAPEYFQQPELSEKCDIFSFGMLLISLVRGVPSFVFHQNGEEICSPEWL 429 (487)
Q Consensus 350 ~~kl~DFg~s~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DvwslG~~l~elltg~~pf~~~~~~~~~~~~~~~ 429 (487)
.+||+|||+++.+....+- ....+|||.||+||.+.+..|+.+|||||+||++|||..-.+||.+. ...+..
T Consensus 166 vvKLGDfGL~r~l~s~~tf--A~S~VGTPyYMSPE~i~~~~Y~~kSDiWslGCllyEMcaL~~PF~g~------n~~~L~ 237 (375)
T KOG0591|consen 166 VVKLGDFGLGRFLSSKTTF--AHSLVGTPYYMSPERIHESGYNFKSDIWSLGCLLYEMCALQSPFYGD------NLLSLC 237 (375)
T ss_pred ceeeccchhHhHhcchhHH--HHhhcCCCcccCHHHHhcCCCCcchhHHHHHHHHHHHHhcCCCcccc------cHHHHH
Confidence 9999999999987654332 24678999999999999999999999999999999999999999544 233333
Q ss_pred HHHHhcCCCCCccCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCChHHHHHH
Q 011360 430 RKVMNSKNPSRAIDPRLPGNGYEKKMLHVLKIAYICTLHDPEERPNSQYVRCR 482 (487)
Q Consensus 430 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~~il~~ 482 (487)
.++ ..+..+ ++| ...++.++..++..|+.+||..||+...++..
T Consensus 238 ~KI-~qgd~~-----~~p---~~~YS~~l~~li~~ci~vd~~~RP~t~~~v~d 281 (375)
T KOG0591|consen 238 KKI-EQGDYP-----PLP---DEHYSTDLRELINMCIAVDPEQRPDTVPYVQD 281 (375)
T ss_pred HHH-HcCCCC-----CCc---HHHhhhHHHHHHHHHccCCcccCCCcchHHHH
Confidence 333 333321 133 34566789999999999999999985444433
No 7
>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.9e-47 Score=376.05 Aligned_cols=277 Identities=36% Similarity=0.613 Sum_probs=235.0
Q ss_pred hhhccccccccccccccceeEEEEEecCCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCCCCc
Q 011360 188 LKKEDCFASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQIRHRNI 267 (487)
Q Consensus 188 ~~~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnI 267 (487)
....++|.....||+|+||.||+|... ++..||||++... .... .++|.+|+.++.+++|||+
T Consensus 71 ~~AT~~Fs~~~~ig~Ggfg~VYkG~l~--~~~~vAVK~~~~~--------------~~~~-~~eF~~Ei~~ls~l~H~Nl 133 (361)
T KOG1187|consen 71 RKATNNFSESNLIGEGGFGTVYKGVLS--DGTVVAVKRLSSN--------------SGQG-EREFLNEVEILSRLRHPNL 133 (361)
T ss_pred HHHHhCCchhcceecCCCeEEEEEEEC--CCCEEEEEEecCC--------------CCcc-hhHHHHHHHHHhcCCCcCc
Confidence 446678999999999999999999875 5589999987321 1111 4559999999999999999
Q ss_pred cccceEEecCC-eeEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeC
Q 011360 268 LPLLAHMVRPD-CHLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVLLN 346 (487)
Q Consensus 268 v~l~~~~~~~~-~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nill~ 346 (487)
|+++|||.+.+ ..+||+||++.|+|.++|...... .++|..+.+|+.++|+||+|||+.....||||||||+|||+|
T Consensus 134 v~LlGyC~e~~~~~~LVYEym~nGsL~d~L~~~~~~--~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKssNILLD 211 (361)
T KOG1187|consen 134 VKLLGYCLEGGEHRLLVYEYMPNGSLEDHLHGKKGE--PLDWETRLKIALGAARGLAYLHEGCPPPIIHRDIKSSNILLD 211 (361)
T ss_pred ccEEEEEecCCceEEEEEEccCCCCHHHHhCCCCCC--CCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCCHHHeeEC
Confidence 99999999988 599999999999999999752111 889999999999999999999865555699999999999999
Q ss_pred CCCCEEEeccCCccccCC-CCceeeEeee-cccccccCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCccccCCCCccc
Q 011360 347 DDMEACISDLGLAMAIPD-GYTRVLISYV-LGTMAYIAPEYFQQPELSEKCDIFSFGMLLISLVRGVPSFVFHQNGEEIC 424 (487)
Q Consensus 347 ~~~~~kl~DFg~s~~~~~-~~~~~~~~~~-~gt~~y~aPE~l~~~~~~~~~DvwslG~~l~elltg~~pf~~~~~~~~~~ 424 (487)
+++++||+|||+|+..+. .... ... .||.+|+|||+...+..+.|+||||||+++.|++||+.|.....+.....
T Consensus 212 ~~~~aKlsDFGLa~~~~~~~~~~---~~~~~gt~gY~~PEy~~~g~lt~KsDVySFGVvllElitgr~~~d~~~~~~~~~ 288 (361)
T KOG1187|consen 212 EDFNAKLSDFGLAKLGPEGDTSV---STTVMGTFGYLAPEYASTGKLTEKSDVYSFGVVLLELITGRKAVDQSRPRGELS 288 (361)
T ss_pred CCCCEEccCccCcccCCccccce---eeecCCCCccCChhhhccCCcCcccccccchHHHHHHHhCCcccCCCCCccccc
Confidence 999999999999976554 2211 122 79999999999999999999999999999999999998886655455556
Q ss_pred cHHHHHHHHhcCCCCCccCCCCC-CCCcH-HHHHHHHHHHhhccCCCCCCCCChHHHHHHHhhh
Q 011360 425 SPEWLRKVMNSKNPSRAIDPRLP-GNGYE-KKMLHVLKIAYICTLHDPEERPNSQYVRCRLSQL 486 (487)
Q Consensus 425 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~l~~li~~cl~~~P~~RPs~~~il~~L~~l 486 (487)
..+|....+......+++|+++. +.... .....+..+..+|++.+|.+||+|.++++.|+.+
T Consensus 289 l~~w~~~~~~~~~~~eiiD~~l~~~~~~~~~~~~~~~~~a~~C~~~~~~~RP~m~~Vv~~L~~~ 352 (361)
T KOG1187|consen 289 LVEWAKPLLEEGKLREIVDPRLKEGEYPDEKEVKKLAELALRCLRPDPKERPTMSQVVKELEGI 352 (361)
T ss_pred HHHHHHHHHHCcchhheeCCCccCCCCChHHHHHHHHHHHHHHcCcCCCcCcCHHHHHHHHHhh
Confidence 78898888888899999999988 44443 6788899999999999999999999999998654
No 8
>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=5e-49 Score=389.28 Aligned_cols=357 Identities=25% Similarity=0.328 Sum_probs=276.9
Q ss_pred chhhhhhhhhHHHHHHhhhchhhhhhHHHHHHHHHH------HH----HHHHhhccccCCCCcccccccCCCCCChhhhh
Q 011360 93 VDYLLDEFQTEAFQTMLLQDADAMSKVKEVNARLQD------IA----WQINVLGLKESFGGKSRNVRQRFPTTPSLISA 162 (487)
Q Consensus 93 ~~~~~~~~~~~~~~~~l~~~~~~~~r~~ei~~~l~~------i~----~~~~~~~l~~~~g~~~~~~~~~~~s~p~~~~~ 162 (487)
.+.+++-.++++++..|..+|||+.|.++....... +. ....||.++...+.........|++.+.++..
T Consensus 49 ~~~yHG~l~red~~~lL~~~GDfLvR~s~~~~~~~~~~~vlSv~~~~~~~~~h~vi~~~~~~~~~~~~~~F~si~~li~~ 128 (474)
T KOG0194|consen 49 LPYYHGLLPREDAEKLLKNDGDFLVRASEPKEGEKREFVVLSVKWSVFKKIKHYVIKRNGNLFFFEGLRKFPTISELVNY 128 (474)
T ss_pred CccccccccHhHHHHHhCCCCceEEEeecccCCcceeEEEEEEEeecCCceeEEEEEEcCCeeEEeccccCCcHHHHHHH
Confidence 789999999999999999999999999887643221 11 24457877776665556666889999988887
Q ss_pred hhcCCCCCCCCcc-ccCCcchhhHHHhhhccccccccccccccceeEEEEEecCCCC---ceEEEEEeeecCchhHHHHH
Q 011360 163 AVRGGSRDRGPTI-FSPLIEKEDLAFLKKEDCFASLEKIGSGGCGEVYKAELPGSNG---KMIAIKKVIVYAPISAAELI 238 (487)
Q Consensus 163 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~lg~G~~g~v~~~~~~~~~~---~~vavK~~~~~~~~~~~~~~ 238 (487)
............. +...+. ...|...+++..+.+.||+|+||.||+|++...++ ..||+|....
T Consensus 129 ~~~~~~~~~~~~~~L~~PI~--r~~Wel~H~~v~l~kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~---------- 196 (474)
T KOG0194|consen 129 YKFSKLEITGKNFFLKRPIP--RQKWELSHSDIELGKKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKG---------- 196 (474)
T ss_pred HHhcccceeccceeeccccc--ccccEEeccCccccceeecccccEEEEEEEEecCCceeeeeEEEeecc----------
Confidence 7665544433332 221122 33477778888999999999999999999865544 3389998732
Q ss_pred HHhhhhhhHHHHHHHHHHHHhccCCCCCccccceEEecCCeeEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHH
Q 011360 239 EEDSKLRDSKLRQIRSEIITASQIRHRNILPLLAHMVRPDCHLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGV 318 (487)
Q Consensus 239 ~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi 318 (487)
...........+.+|+++|++++|||||++||++....++|+|||+|+||+|.++|.. ....++..++..++.++
T Consensus 197 --~~~~~~~~~~e~m~EArvMr~l~H~NVVr~yGVa~~~~Pl~ivmEl~~gGsL~~~L~k---~~~~v~~~ek~~~~~~A 271 (474)
T KOG0194|consen 197 --SSELTKEQIKEFMKEARVMRQLNHPNVVRFYGVAVLEEPLMLVMELCNGGSLDDYLKK---NKKSLPTLEKLRFCYDA 271 (474)
T ss_pred --cccccHHHHHHHHHHHHHHHhCCCCCEEEEEEEEcCCCccEEEEEecCCCcHHHHHHh---CCCCCCHHHHHHHHHHH
Confidence 1234566788999999999999999999999999999999999999999999999986 23369999999999999
Q ss_pred HHHHHHHHhcCCCCeeecCCCCCCEEeCCCCCEEEeccCCccccCCCCceeeEeeecccccccCCcccCCCCCCchhHHH
Q 011360 319 ASGLEYLHMYHSASIIHGDIKPRNVLLNDDMEACISDLGLAMAIPDGYTRVLISYVLGTMAYIAPEYFQQPELSEKCDIF 398 (487)
Q Consensus 319 ~~~L~~Lh~~h~~givH~Dlkp~Nill~~~~~~kl~DFg~s~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~Dvw 398 (487)
+.||+|| |+++++||||.++|||++.++.+||+|||+++....-... .....-+.+|+|||.+..+.|+.++|||
T Consensus 272 A~Gl~YL---h~k~~IHRDIAARNcL~~~~~~vKISDFGLs~~~~~~~~~--~~~~klPirWLAPEtl~~~~~s~kTDV~ 346 (474)
T KOG0194|consen 272 ARGLEYL---HSKNCIHRDIAARNCLYSKKGVVKISDFGLSRAGSQYVMK--KFLKKLPIRWLAPETLNTGIFSFKTDVW 346 (474)
T ss_pred HhHHHHH---HHCCCcchhHhHHHheecCCCeEEeCccccccCCcceeec--cccccCcceecChhhhccCccccccchh
Confidence 9999999 7888999999999999999999999999998765311111 1112357899999999999999999999
Q ss_pred HHHHHHHHHHh-CCCCccccCCCCccccHHHHHHHHhcCCCCCccCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCChH
Q 011360 399 SFGMLLISLVR-GVPSFVFHQNGEEICSPEWLRKVMNSKNPSRAIDPRLPGNGYEKKMLHVLKIAYICTLHDPEERPNSQ 477 (487)
Q Consensus 399 slG~~l~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~ 477 (487)
||||++||+++ |..||.+... .+....+...+.. -..++ ..+..+..++..||..+|++||||.
T Consensus 347 sfGV~~~Eif~~g~~Py~g~~~------~~v~~kI~~~~~r-~~~~~--------~~p~~~~~~~~~c~~~~p~~R~tm~ 411 (474)
T KOG0194|consen 347 SFGVLLWEIFENGAEPYPGMKN------YEVKAKIVKNGYR-MPIPS--------KTPKELAKVMKQCWKKDPEDRPTMS 411 (474)
T ss_pred heeeeEEeeeccCCCCCCCCCH------HHHHHHHHhcCcc-CCCCC--------CCHHHHHHHHHHhccCChhhccCHH
Confidence 99999999999 7889944332 2333333232222 11122 2235688888999999999999999
Q ss_pred HHHHHHhhh
Q 011360 478 YVRCRLSQL 486 (487)
Q Consensus 478 ~il~~L~~l 486 (487)
++.+.|+.+
T Consensus 412 ~i~~~l~~~ 420 (474)
T KOG0194|consen 412 TIKKKLEAL 420 (474)
T ss_pred HHHHHHHHH
Confidence 999999865
No 9
>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=6.6e-49 Score=368.36 Aligned_cols=261 Identities=27% Similarity=0.382 Sum_probs=208.3
Q ss_pred hccccccccccccccceeEEEEEecCCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCCCCccc
Q 011360 190 KEDCFASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQIRHRNILP 269 (487)
Q Consensus 190 ~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~ 269 (487)
..+.|.+.+.||.|+||.|-+|. +..+|+.||||++..-. .... +. .......+.+|+++|.+|+|||||+
T Consensus 170 ~~d~yii~~~LGsGafg~Vkla~-e~~tgk~vAiKIi~krk------~~~~-s~-~~~~~~~v~~EieILkkL~HP~IV~ 240 (475)
T KOG0615|consen 170 FNDYYIISKTLGSGAFGLVKLAY-EKKTGKQVAIKIINKRK------STGC-SR-AIAKTRDVQNEIEILKKLSHPNIVR 240 (475)
T ss_pred hcceeEeeeeecCCceeEEEEEE-EcccCcEEEeeeeehhh------cccc-cc-cccchhhhHHHHHHHHhcCCCCEEE
Confidence 34568889999999999999995 67899999999984311 1000 00 1122344689999999999999999
Q ss_pred cceEEecCCeeEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCC-
Q 011360 270 LLAHMVRPDCHLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVLLNDD- 348 (487)
Q Consensus 270 l~~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nill~~~- 348 (487)
++++|..++..||||||++||.|.+++-. ++.+.+..-+.++.|++.|+.|| |++||+||||||+|||+..+
T Consensus 241 ~~d~f~~~ds~YmVlE~v~GGeLfd~vv~----nk~l~ed~~K~~f~Qll~avkYL---H~~GI~HRDiKPeNILl~~~~ 313 (475)
T KOG0615|consen 241 IKDFFEVPDSSYMVLEYVEGGELFDKVVA----NKYLREDLGKLLFKQLLTAVKYL---HSQGIIHRDIKPENILLSNDA 313 (475)
T ss_pred EeeeeecCCceEEEEEEecCccHHHHHHh----ccccccchhHHHHHHHHHHHHHH---HHcCcccccCCcceEEeccCC
Confidence 99999999999999999999999999864 56677788889999999999999 89999999999999999866
Q ss_pred --CCEEEeccCCccccCCCCceeeEeeecccccccCCcccCCCC---CCchhHHHHHHHHHHHHHhCCCCccccCCCCcc
Q 011360 349 --MEACISDLGLAMAIPDGYTRVLISYVLGTMAYIAPEYFQQPE---LSEKCDIFSFGMLLISLVRGVPSFVFHQNGEEI 423 (487)
Q Consensus 349 --~~~kl~DFg~s~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~---~~~~~DvwslG~~l~elltg~~pf~~~~~~~~~ 423 (487)
..+||+|||+|+..+. .....+.||||.|.|||++.+.. +..++|+||+||++|-+++|.+||......
T Consensus 314 e~~llKItDFGlAK~~g~---~sfm~TlCGTpsYvAPEVl~~kg~~~~~~kVDiWSlGcvLfvcLsG~pPFS~~~~~--- 387 (475)
T KOG0615|consen 314 EDCLLKITDFGLAKVSGE---GSFMKTLCGTPSYVAPEVLASKGVEYYPSKVDIWSLGCVLFVCLSGYPPFSEEYTD--- 387 (475)
T ss_pred cceEEEecccchhhcccc---ceehhhhcCCccccChhheecCCeecccchheeeeccceEEEEeccCCCcccccCC---
Confidence 6799999999998753 23457889999999999998653 345889999999999999999999543221
Q ss_pred ccHHHHHHHHhcCCCCCccCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCChHHHHH
Q 011360 424 CSPEWLRKVMNSKNPSRAIDPRLPGNGYEKKMLHVLKIAYICTLHDPEERPNSQYVRC 481 (487)
Q Consensus 424 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~~il~ 481 (487)
..+.+.+..+... +-+....+++++..++|.+||..||++|||+.++++
T Consensus 388 ---~sl~eQI~~G~y~------f~p~~w~~Iseea~dlI~~mL~VdP~~R~s~~eaL~ 436 (475)
T KOG0615|consen 388 ---PSLKEQILKGRYA------FGPLQWDRISEEALDLINWMLVVDPENRPSADEALN 436 (475)
T ss_pred ---ccHHHHHhcCccc------ccChhhhhhhHHHHHHHHHhhEeCcccCcCHHHHhc
Confidence 1122222233221 122345677888999999999999999999999875
No 10
>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]
Probab=100.00 E-value=3.3e-47 Score=354.47 Aligned_cols=245 Identities=25% Similarity=0.373 Sum_probs=206.8
Q ss_pred cccccccccccccceeEEEEEecCCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCCCCccccc
Q 011360 192 DCFASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQIRHRNILPLL 271 (487)
Q Consensus 192 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~ 271 (487)
++|.+++.||+|+||+|+.++.. .+++.+|+|++. +....+....+....|..++..++||+||+++
T Consensus 25 ~dF~~lkviGkG~fGkV~~Vrk~-dt~kiYAmKvl~------------K~~iv~~~e~~~~~~Er~IL~~v~hPFiv~l~ 91 (357)
T KOG0598|consen 25 DDFEILKVIGKGSFGKVFQVRKK-DTGKIYAMKVLK------------KKKIVEKKEVRHTKAERNILSKIKHPFIVKLI 91 (357)
T ss_pred hheeeeeeeeccCCceEEEEEEc-ccCceeehhhhh------------hhHhhhhhhHHHHHHHHHHHHhCCCCcEeeeE
Confidence 45999999999999999999854 799999999773 33344456788899999999999999999999
Q ss_pred eEEecCCeeEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCCE
Q 011360 272 AHMVRPDCHLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVLLNDDMEA 351 (487)
Q Consensus 272 ~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nill~~~~~~ 351 (487)
..|++.+.+|+|+||+.||.|...|+. .+.+++..++.++..|+.||.|| |++|||||||||+|||++.+|++
T Consensus 92 ysFQt~~kLylVld~~~GGeLf~hL~~----eg~F~E~~arfYlaEi~lAL~~L---H~~gIiyRDlKPENILLd~~GHi 164 (357)
T KOG0598|consen 92 YSFQTEEKLYLVLDYLNGGELFYHLQR----EGRFSEDRARFYLAEIVLALGYL---HSKGIIYRDLKPENILLDEQGHI 164 (357)
T ss_pred EecccCCeEEEEEeccCCccHHHHHHh----cCCcchhHHHHHHHHHHHHHHHH---HhCCeeeccCCHHHeeecCCCcE
Confidence 999999999999999999999999975 67899999999999999999999 88889999999999999999999
Q ss_pred EEeccCCccccCCCCceeeEeeecccccccCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCccccCCCCccccHHHHHH
Q 011360 352 CISDLGLAMAIPDGYTRVLISYVLGTMAYIAPEYFQQPELSEKCDIFSFGMLLISLVRGVPSFVFHQNGEEICSPEWLRK 431 (487)
Q Consensus 352 kl~DFg~s~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DvwslG~~l~elltg~~pf~~~~~~~~~~~~~~~~~ 431 (487)
+|+|||+++........ ..+++||+.|||||++.+..|+..+|+||+|+++|||++|.+||...+ ...+...
T Consensus 165 ~LtDFgL~k~~~~~~~~--t~tfcGT~eYmAPEil~~~gy~~~vDWWsLGillYeML~G~pPF~~~~------~~~~~~~ 236 (357)
T KOG0598|consen 165 KLTDFGLCKEDLKDGDA--TRTFCGTPEYMAPEILLGKGYDKAVDWWSLGILLYEMLTGKPPFYAED------VKKMYDK 236 (357)
T ss_pred EEeccccchhcccCCCc--cccccCCccccChHHHhcCCCCcccchHhHHHHHHHHhhCCCCCcCcc------HHHHHHH
Confidence 99999999865443332 256899999999999999999999999999999999999999994432 3344454
Q ss_pred HHhcCCCCCccCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCC
Q 011360 432 VMNSKNPSRAIDPRLPGNGYEKKMLHVLKIAYICTLHDPEERP 474 (487)
Q Consensus 432 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RP 474 (487)
+.....+ ..+.-+ +.+..+++.++|..||++|-
T Consensus 237 I~~~k~~--~~p~~l--------s~~ardll~~LL~rdp~~RL 269 (357)
T KOG0598|consen 237 ILKGKLP--LPPGYL--------SEEARDLLKKLLKRDPRQRL 269 (357)
T ss_pred HhcCcCC--CCCccC--------CHHHHHHHHHHhccCHHHhc
Confidence 5443311 111112 24588999999999999995
No 11
>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.9e-45 Score=346.16 Aligned_cols=266 Identities=27% Similarity=0.382 Sum_probs=217.4
Q ss_pred hhccccccccccccccceeEEEEEecCCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCCCCcc
Q 011360 189 KKEDCFASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQIRHRNIL 268 (487)
Q Consensus 189 ~~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv 268 (487)
...+.|++...||.|..+.||+|++. ..+..||||++.. ..-...+..+.+|+..++.++||||+
T Consensus 23 ~n~~~YeL~e~IG~G~sa~V~~A~c~-p~~e~VAIK~inL--------------Ekc~~~ld~l~kE~~~msl~~HPNIv 87 (516)
T KOG0582|consen 23 LNAKDYELQEVIGVGASAVVYLARCI-PTNEVVAIKIINL--------------EKCNNDLDALRKEVQTMSLIDHPNIV 87 (516)
T ss_pred CCccceeEEEEEeccceeEeeeeeec-ccCCEEEEEEeeh--------------hhhhhhHHHHHHHHHHhhhcCCCCcc
Confidence 33456999999999999999999864 5779999999843 22233478899999999999999999
Q ss_pred ccceEEecCCeeEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCC
Q 011360 269 PLLAHMVRPDCHLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVLLNDD 348 (487)
Q Consensus 269 ~l~~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nill~~~ 348 (487)
+++..|..+..+|+||.||.+||+.+++..+-. ..+++..+..++++++.||.|| |.+|.||||||+.||||+.+
T Consensus 88 ~~~~sFvv~~~LWvVmpfMa~GS~ldIik~~~~--~Gl~E~~Ia~iLre~LkaL~YL---H~~G~IHRdvKAgnILi~~d 162 (516)
T KOG0582|consen 88 TYHCSFVVDSELWVVMPFMAGGSLLDIIKTYYP--DGLEEASIATILREVLKALDYL---HQNGHIHRDVKAGNILIDSD 162 (516)
T ss_pred eEEEEEEecceeEEeehhhcCCcHHHHHHHHcc--ccccHHHHHHHHHHHHHHHHHH---HhcCceecccccccEEEcCC
Confidence 999999999999999999999999999987443 4489999999999999999999 88999999999999999999
Q ss_pred CCEEEeccCCccccCCCCceeeE--eeecccccccCCcccCC--CCCCchhHHHHHHHHHHHHHhCCCCccccCCCCccc
Q 011360 349 MEACISDLGLAMAIPDGYTRVLI--SYVLGTMAYIAPEYFQQ--PELSEKCDIFSFGMLLISLVRGVPSFVFHQNGEEIC 424 (487)
Q Consensus 349 ~~~kl~DFg~s~~~~~~~~~~~~--~~~~gt~~y~aPE~l~~--~~~~~~~DvwslG~~l~elltg~~pf~~~~~~~~~~ 424 (487)
|.|||+|||.+-.+..+..+... .++.||+.|||||++.. ..|+.|+|||||||+..||.+|..||....
T Consensus 163 G~VkLadFgvsa~l~~~G~R~~~rf~tfvgtp~wmAPEvl~q~~~GYdfKaDIwSfGITA~ELA~G~aPf~k~p------ 236 (516)
T KOG0582|consen 163 GTVKLADFGVSASLFDSGDRQVTRFNTFVGTPCWMAPEVLMQQLHGYDFKADIWSFGITACELAHGHAPFSKYP------ 236 (516)
T ss_pred CcEEEcCceeeeeecccCceeeEeeccccCcccccChHHhhhcccCccchhhhhhhhHHHHHHhcCCCCcccCC------
Confidence 99999999998776554433222 45689999999999654 379999999999999999999999994332
Q ss_pred cHHHHHHHHhcCCCCCccCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCChHHHHH
Q 011360 425 SPEWLRKVMNSKNPSRAIDPRLPGNGYEKKMLHVLKIAYICTLHDPEERPNSQYVRC 481 (487)
Q Consensus 425 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~~il~ 481 (487)
....+...+.+. |....-..++.+........+.+++..||++||.+|||++++++
T Consensus 237 PmkvLl~tLqn~-pp~~~t~~~~~d~~k~~~ksf~e~i~~CL~kDP~kRptAskLlk 292 (516)
T KOG0582|consen 237 PMKVLLLTLQND-PPTLLTSGLDKDEDKKFSKSFREMIALCLVKDPSKRPTASKLLK 292 (516)
T ss_pred hHHHHHHHhcCC-CCCcccccCChHHhhhhcHHHHHHHHHHhhcCcccCCCHHHHhc
Confidence 233333333333 32222333344445566678999999999999999999999875
No 12
>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]
Probab=100.00 E-value=5.5e-46 Score=335.64 Aligned_cols=265 Identities=22% Similarity=0.337 Sum_probs=206.3
Q ss_pred ccccccccccccceeEEEEEecCCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCCCCccccce
Q 011360 193 CFASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQIRHRNILPLLA 272 (487)
Q Consensus 193 ~~~~~~~lg~G~~g~v~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~ 272 (487)
.|+.+..+|+|++|.||+++. +.+|+.||||++.. +...+...+-.++|+.++++++|||+|.++.
T Consensus 3 kYE~LgkvGEGSYGvV~KCrn-k~TgqIVAIKkF~E-------------sedd~~VkKIAlREIrmLKqLkH~NLVnLiE 68 (396)
T KOG0593|consen 3 KYEKLGKVGEGSYGVVMKCRN-KDTGQIVAIKKFVE-------------SEDDPVVKKIALREIRMLKQLKHENLVNLIE 68 (396)
T ss_pred HHhhhhccccCcceEEEEecc-CCcccEEEEEeecc-------------CCccHHHHHHHHHHHHHHHhcccchHHHHHH
Confidence 588899999999999999974 57999999999843 2333445566789999999999999999999
Q ss_pred EEecCCeeEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCCEE
Q 011360 273 HMVRPDCHLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVLLNDDMEAC 352 (487)
Q Consensus 273 ~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nill~~~~~~k 352 (487)
+|.....+++|+|||+. ++.+-|+. ....++...+.+++.|++.|+.|+ |++++|||||||+|||++.+|.+|
T Consensus 69 VFrrkrklhLVFE~~dh-TvL~eLe~---~p~G~~~~~vk~~l~Q~l~ai~~c---Hk~n~IHRDIKPENILit~~gvvK 141 (396)
T KOG0593|consen 69 VFRRKRKLHLVFEYCDH-TVLHELER---YPNGVPSELVKKYLYQLLKAIHFC---HKNNCIHRDIKPENILITQNGVVK 141 (396)
T ss_pred HHHhcceeEEEeeecch-HHHHHHHh---ccCCCCHHHHHHHHHHHHHHhhhh---hhcCeecccCChhheEEecCCcEE
Confidence 99999999999999977 45455553 356688899999999999999999 888999999999999999999999
Q ss_pred EeccCCccccCCCCceeeEeeecccccccCCcccCC-CCCCchhHHHHHHHHHHHHHhCCCCccccCCCCccc-------
Q 011360 353 ISDLGLAMAIPDGYTRVLISYVLGTMAYIAPEYFQQ-PELSEKCDIFSFGMLLISLVRGVPSFVFHQNGEEIC------- 424 (487)
Q Consensus 353 l~DFg~s~~~~~~~~~~~~~~~~gt~~y~aPE~l~~-~~~~~~~DvwslG~~l~elltg~~pf~~~~~~~~~~------- 424 (487)
|||||+|+.+..... ..+.++.|.+|.|||.+.+ ..|+..+||||+||++.||++|.+.|.+.++-....
T Consensus 142 LCDFGFAR~L~~pgd--~YTDYVATRWYRaPELLvGDtqYG~pVDiWAiGCv~aEl~~G~pL~PG~SDiDQLy~I~ktLG 219 (396)
T KOG0593|consen 142 LCDFGFARTLSAPGD--NYTDYVATRWYRAPELLVGDTQYGKPVDIWAIGCVFAELLTGEPLWPGRSDIDQLYLIRKTLG 219 (396)
T ss_pred eccchhhHhhcCCcc--hhhhhhhhhhccChhhhcccCcCCCcccchhhhHHHHHHhcCCcCCCCcchHHHHHHHHHHHc
Confidence 999999998864222 1245678999999999887 689999999999999999999999997665422111
Q ss_pred --cHHHHHHHHhcCCCCCccC-CCCC-----CCCcHHHHHHHHHHHhhccCCCCCCCCChHHHHH
Q 011360 425 --SPEWLRKVMNSKNPSRAID-PRLP-----GNGYEKKMLHVLKIAYICTLHDPEERPNSQYVRC 481 (487)
Q Consensus 425 --~~~~~~~~~~~~~~~~~~~-~~~~-----~~~~~~~~~~l~~li~~cl~~~P~~RPs~~~il~ 481 (487)
.+. ...++..+..-..+. |... ...++..+.-+.+++..||+.||.+|+|-++++.
T Consensus 220 ~L~pr-hq~iF~~N~~F~Gv~lP~~~~~epLe~k~p~~s~~~ld~~k~cL~~dP~~R~sc~qll~ 283 (396)
T KOG0593|consen 220 NLIPR-HQSIFSSNPFFHGVRLPEPEHPEPLERKYPKISNVLLDLLKKCLKMDPDDRLSCEQLLH 283 (396)
T ss_pred ccCHH-HHHHhccCCceeeeecCCCCCccchhhhcccchHHHHHHHHHHhcCCccccccHHHHhc
Confidence 111 111222211111111 0000 1123344557889999999999999999999874
No 13
>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]
Probab=100.00 E-value=7.4e-45 Score=351.93 Aligned_cols=255 Identities=25% Similarity=0.385 Sum_probs=211.7
Q ss_pred hccccccccccccccceeEEEEEecCCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccC-CCCCcc
Q 011360 190 KEDCFASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQI-RHRNIL 268 (487)
Q Consensus 190 ~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpnIv 268 (487)
...+|...++||+|+|++|++|+ +..+++.||||++. +.-..++..++.+..|-.+|.+| .||.|+
T Consensus 71 ~~~DF~Fg~~lGeGSYStV~~A~-~~~t~keYAiKVl~------------K~~Iike~KvkYV~~Ek~~l~~L~~hPgiv 137 (604)
T KOG0592|consen 71 TPNDFKFGKILGEGSYSTVVLAR-EKATGKEYAIKVLD------------KRYIIKEKKVKYVTREKEALTQLSGHPGIV 137 (604)
T ss_pred ChhhcchhheeccccceeEEEee-ecCCCceeeHhhhh------------HHHHHhhcccchhhHHHHHHHHhhCCCCeE
Confidence 34569999999999999999997 45699999999872 22234445566778888899999 999999
Q ss_pred ccceEEecCCeeEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCC
Q 011360 269 PLLAHMVRPDCHLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVLLNDD 348 (487)
Q Consensus 269 ~l~~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nill~~~ 348 (487)
++|..|.+...+|+|+||+++|+|.++|..+ +.+++...+.++.+|+.||+|| |++|||||||||+|||+++|
T Consensus 138 kLy~TFQD~~sLYFvLe~A~nGdll~~i~K~----Gsfde~caR~YAAeIldAleyl---H~~GIIHRDlKPENILLd~d 210 (604)
T KOG0592|consen 138 KLYFTFQDEESLYFVLEYAPNGDLLDLIKKY----GSFDETCARFYAAEILDALEYL---HSNGIIHRDLKPENILLDKD 210 (604)
T ss_pred EEEEEeecccceEEEEEecCCCcHHHHHHHh----CcchHHHHHHHHHHHHHHHHHH---HhcCceeccCChhheeEcCC
Confidence 9999999999999999999999999999873 6799999999999999999999 89999999999999999999
Q ss_pred CCEEEeccCCccccCCCCce-----------eeEeeecccccccCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCcccc
Q 011360 349 MEACISDLGLAMAIPDGYTR-----------VLISYVLGTMAYIAPEYFQQPELSEKCDIFSFGMLLISLVRGVPSFVFH 417 (487)
Q Consensus 349 ~~~kl~DFg~s~~~~~~~~~-----------~~~~~~~gt~~y~aPE~l~~~~~~~~~DvwslG~~l~elltg~~pf~~~ 417 (487)
+++||+|||.+..+...... .....++||..|.+||+|.....+..+|+|+|||++|+|+.|.+||...
T Consensus 211 mhikITDFGsAK~l~~~~~~~~~~~~~~~a~s~~~SFVGTAeYVSPElL~~~~~~~~sDiWAlGCilyQmlaG~PPFra~ 290 (604)
T KOG0592|consen 211 GHIKITDFGSAKILSPSQKSQENPVDPNQASSRRSSFVGTAEYVSPELLNDSPAGPSSDLWALGCILYQMLAGQPPFRAA 290 (604)
T ss_pred CcEEEeeccccccCChhhccccCccCcccccCcccceeeeecccCHHHhcCCCCCcccchHHHHHHHHHHhcCCCCCccc
Confidence 99999999999887543322 1124588999999999999999999999999999999999999999443
Q ss_pred CCCCccccHHHHHHHHhcCCCCCccCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCChHHHHH
Q 011360 418 QNGEEICSPEWLRKVMNSKNPSRAIDPRLPGNGYEKKMLHVLKIAYICTLHDPEERPNSQYVRC 481 (487)
Q Consensus 418 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~~il~ 481 (487)
. ..-.+.+++.- ...+++.++ ..+.+|+.+.|..||++|+|.++|.+
T Consensus 291 N------eyliFqkI~~l---~y~fp~~fp--------~~a~dLv~KLLv~dp~~Rlt~~qIk~ 337 (604)
T KOG0592|consen 291 N------EYLIFQKIQAL---DYEFPEGFP--------EDARDLIKKLLVRDPSDRLTSQQIKA 337 (604)
T ss_pred c------HHHHHHHHHHh---cccCCCCCC--------HHHHHHHHHHHccCccccccHHHHhh
Confidence 2 22233444331 112223333 45889999999999999999999875
No 14
>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4e-45 Score=348.56 Aligned_cols=264 Identities=25% Similarity=0.339 Sum_probs=206.0
Q ss_pred ccccccccccccccceeEEEEEecCCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCC-CCCccc
Q 011360 191 EDCFASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQIR-HRNILP 269 (487)
Q Consensus 191 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-hpnIv~ 269 (487)
.++|.+++.||.|+||.||+|+ ...+|..||||+++. .........-++|+..+++|+ |||||+
T Consensus 9 m~RY~~i~klGDGTfGsV~la~-~~~~~~~VAIK~MK~--------------Kf~s~ee~~nLREvksL~kln~hpniik 73 (538)
T KOG0661|consen 9 MDRYTVIRKLGDGTFGSVYLAK-SKETGELVAIKKMKK--------------KFYSWEECMNLREVKSLRKLNPHPNIIK 73 (538)
T ss_pred HHHHHHHHHhcCCcceeEEEee-ecCCCceeeHHHHHh--------------hhccHHHHHHHHHHHHHHhcCCCCcchh
Confidence 4579999999999999999997 457889999998722 112222233478999999998 999999
Q ss_pred cceEEecCC-eeEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCC
Q 011360 270 LLAHMVRPD-CHLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVLLNDD 348 (487)
Q Consensus 270 l~~~~~~~~-~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nill~~~ 348 (487)
+.+++.+.+ .+|+||||| ..+|..++.. + +..+++..+..|+.||++||+|+ |.+|++|||+||+|||+..+
T Consensus 74 L~Evi~d~~~~L~fVfE~M-d~NLYqLmK~--R-~r~fse~~irnim~QilqGL~hi---Hk~GfFHRDlKPENiLi~~~ 146 (538)
T KOG0661|consen 74 LKEVIRDNDRILYFVFEFM-DCNLYQLMKD--R-NRLFSESDIRNIMYQILQGLAHI---HKHGFFHRDLKPENILISGN 146 (538)
T ss_pred hHHHhhccCceEeeeHHhh-hhhHHHHHhh--c-CCcCCHHHHHHHHHHHHHHHHHH---HhcCcccccCChhheEeccc
Confidence 999999887 999999999 5599999985 3 78999999999999999999999 88999999999999999988
Q ss_pred CCEEEeccCCccccCCCCceeeEeeecccccccCCcccC-CCCCCchhHHHHHHHHHHHHHhCCCCccccCCCCcc----
Q 011360 349 MEACISDLGLAMAIPDGYTRVLISYVLGTMAYIAPEYFQ-QPELSEKCDIFSFGMLLISLVRGVPSFVFHQNGEEI---- 423 (487)
Q Consensus 349 ~~~kl~DFg~s~~~~~~~~~~~~~~~~gt~~y~aPE~l~-~~~~~~~~DvwslG~~l~elltg~~pf~~~~~~~~~---- 423 (487)
..+||+|||+|+........ +.++.|.+|.|||+|. .+.|+.+.|+||+||+++|+.+-++.|.+.+.-...
T Consensus 147 ~~iKiaDFGLARev~SkpPY---TeYVSTRWYRAPEvLLrs~~Ys~pvD~wA~GcI~aEl~sLrPLFPG~sE~Dqi~KIc 223 (538)
T KOG0661|consen 147 DVIKIADFGLAREVRSKPPY---TEYVSTRWYRAPEVLLRSGYYSSPVDMWAVGCIMAELYSLRPLFPGASEIDQIYKIC 223 (538)
T ss_pred ceeEecccccccccccCCCc---chhhhcccccchHHhhhccccCCchHHHHHHHHHHHHHHhcccCCCCcHHHHHHHHH
Confidence 89999999999987554332 4567899999999875 568999999999999999999999999655321111
Q ss_pred ---------ccHH--HHHHHHhcCCCCCccCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCChHHHHH
Q 011360 424 ---------CSPE--WLRKVMNSKNPSRAIDPRLPGNGYEKKMLHVLKIAYICTLHDPEERPNSQYVRC 481 (487)
Q Consensus 424 ---------~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~~il~ 481 (487)
..++ .+...+. -.........+.. -.+..+.++.++|.+|+.+||++|||+++.++
T Consensus 224 ~VLGtP~~~~~~eg~~La~~mn-f~~P~~~~~~l~~-L~p~~s~~~~~li~~ll~WDP~kRpTA~~al~ 290 (538)
T KOG0661|consen 224 EVLGTPDKDSWPEGYNLASAMN-FRFPQVKPSPLKD-LLPNASSEAASLIERLLAWDPDKRPTASQALQ 290 (538)
T ss_pred HHhCCCccccchhHHHHHHHhc-cCCCcCCCCChHH-hCcccCHHHHHHHHHHhcCCCccCccHHHHhc
Confidence 0011 1111111 1111111111111 12236678999999999999999999999886
No 15
>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=3.3e-44 Score=340.26 Aligned_cols=254 Identities=26% Similarity=0.398 Sum_probs=200.2
Q ss_pred ccccccccccccceeEEEEEecCCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCCCCccccce
Q 011360 193 CFASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQIRHRNILPLLA 272 (487)
Q Consensus 193 ~~~~~~~lg~G~~g~v~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~ 272 (487)
++...+.||+|+||.||++.. ..+|...|||.+... .....+.+.+|+.++.+++|||||+++|
T Consensus 18 ~~~~~~~lG~Gs~G~V~l~~~-~~~g~~~AvK~v~~~---------------~~~~~~~l~~Ei~iL~~l~~p~IV~~~G 81 (313)
T KOG0198|consen 18 NWSKGKLLGRGSFGSVYLATN-KKTGELMAVKSVELE---------------DSPTSESLEREIRILSRLNHPNIVQYYG 81 (313)
T ss_pred hhhhhccccCccceEEEEEEe-cCCCcceeeeeeecc---------------cchhHHHHHHHHHHHHhCCCCCEEeeCC
Confidence 477889999999999999975 446899999988431 1111667899999999999999999999
Q ss_pred EEecCC--eeEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCC-CC
Q 011360 273 HMVRPD--CHLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVLLND-DM 349 (487)
Q Consensus 273 ~~~~~~--~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nill~~-~~ 349 (487)
...... .+++.|||+++|+|.+++... ++ .+++..+..+++||++||.|| |++|||||||||+|||++. ++
T Consensus 82 ~~~~~~~~~~~i~mEy~~~GsL~~~~~~~--g~-~l~E~~v~~ytr~iL~GL~yl---Hs~g~vH~DiK~~NiLl~~~~~ 155 (313)
T KOG0198|consen 82 SSSSRENDEYNIFMEYAPGGSLSDLIKRY--GG-KLPEPLVRRYTRQILEGLAYL---HSKGIVHCDIKPANILLDPSNG 155 (313)
T ss_pred ccccccCeeeEeeeeccCCCcHHHHHHHc--CC-CCCHHHHHHHHHHHHHHHHHH---HhCCEeccCcccceEEEeCCCC
Confidence 755444 689999999999999999862 23 799999999999999999999 8999999999999999999 79
Q ss_pred CEEEeccCCccccCC-CCceeeEeeecccccccCCcccCCC-CCCchhHHHHHHHHHHHHHhCCCCccccCCCCccccHH
Q 011360 350 EACISDLGLAMAIPD-GYTRVLISYVLGTMAYIAPEYFQQP-ELSEKCDIFSFGMLLISLVRGVPSFVFHQNGEEICSPE 427 (487)
Q Consensus 350 ~~kl~DFg~s~~~~~-~~~~~~~~~~~gt~~y~aPE~l~~~-~~~~~~DvwslG~~l~elltg~~pf~~~~~~~~~~~~~ 427 (487)
.+||+|||++..... ...........||+.|||||++..+ ....++|||||||++.||+||++||... ....+
T Consensus 156 ~~KlaDFG~a~~~~~~~~~~~~~~~~~Gtp~~maPEvi~~g~~~~~~sDiWSlGCtVvEM~Tg~~PW~~~-----~~~~~ 230 (313)
T KOG0198|consen 156 DVKLADFGLAKKLESKGTKSDSELSVQGTPNYMAPEVIRNGEVARRESDIWSLGCTVVEMLTGKPPWSEF-----FEEAE 230 (313)
T ss_pred eEEeccCccccccccccccccccccccCCccccCchhhcCCCcCCccchhhhcCCEEEeccCCCCcchhh-----cchHH
Confidence 999999999987653 1111122356799999999999963 3345999999999999999999999443 11223
Q ss_pred HHHHHHhcCCCCCccCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCChHHHHHH
Q 011360 428 WLRKVMNSKNPSRAIDPRLPGNGYEKKMLHVLKIAYICTLHDPEERPNSQYVRCR 482 (487)
Q Consensus 428 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~~il~~ 482 (487)
+..........+ .++.. .+.+..+++..|+..+|++|||+.+++..
T Consensus 231 ~~~~ig~~~~~P-~ip~~--------ls~~a~~Fl~~C~~~~p~~Rpta~eLL~h 276 (313)
T KOG0198|consen 231 ALLLIGREDSLP-EIPDS--------LSDEAKDFLRKCFKRDPEKRPTAEELLEH 276 (313)
T ss_pred HHHHHhccCCCC-CCCcc--------cCHHHHHHHHHHhhcCcccCcCHHHHhhC
Confidence 333333222111 22222 33568899999999999999999999863
No 16
>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=1.3e-44 Score=368.97 Aligned_cols=262 Identities=24% Similarity=0.377 Sum_probs=214.9
Q ss_pred cccccccccccccceeEEEEEecC----CCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCCCCc
Q 011360 192 DCFASLEKIGSGGCGEVYKAELPG----SNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQIRHRNI 267 (487)
Q Consensus 192 ~~~~~~~~lg~G~~g~v~~~~~~~----~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnI 267 (487)
.+....+.||+|+||+||+|+... .+...||||.++. .........|++|+++++.++||||
T Consensus 486 ~~i~~~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd--------------~a~~~~~~dF~REaeLla~l~H~nI 551 (774)
T KOG1026|consen 486 SDIVFKEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKD--------------KAENQARQDFRREAELLAELQHPNI 551 (774)
T ss_pred hheeehhhhcCchhhhhhhhhccCCCCCccceehhHhhhcc--------------cccHHHHHHHHHHHHHHHhccCCCe
Confidence 346778899999999999998642 2446799998732 2333467789999999999999999
Q ss_pred cccceEEecCCeeEEEEEecCCCCHHHHHhhhhc------CC----CCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecC
Q 011360 268 LPLLAHMVRPDCHLLVYEFMKNGSLQDILDDVSR------GR----RELDWPSRHRIALGVASGLEYLHMYHSASIIHGD 337 (487)
Q Consensus 268 v~l~~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~------~~----~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~D 337 (487)
|+++|+|..++++|+|+|||..|+|..||..... .+ .+++..+.+.|+.|||.|+.||- ++.+||||
T Consensus 552 VrLlGVC~~~~P~~MvFEYm~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~YLs---~~~FVHRD 628 (774)
T KOG1026|consen 552 VRLLGVCREGDPLCMVFEYMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAAGMEYLS---SHHFVHRD 628 (774)
T ss_pred EEEEEEEccCCeeEEEEEecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHH---hCcccccc
Confidence 9999999999999999999999999999975332 12 33888999999999999999994 44599999
Q ss_pred CCCCCEEeCCCCCEEEeccCCccccCCCCceeeEeeecccccccCCcccCCCCCCchhHHHHHHHHHHHHHh-CCCCccc
Q 011360 338 IKPRNVLLNDDMEACISDLGLAMAIPDGYTRVLISYVLGTMAYIAPEYFQQPELSEKCDIFSFGMLLISLVR-GVPSFVF 416 (487)
Q Consensus 338 lkp~Nill~~~~~~kl~DFg~s~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DvwslG~~l~ellt-g~~pf~~ 416 (487)
|..+|+||.++..|||+|||+++...............-+++|||||.+..+.||.+||||||||+|||+++ |+.||.+
T Consensus 629 LATRNCLVge~l~VKIsDfGLsRdiYssDYYk~~~~t~lPIRWMppEsIly~kFTteSDVWs~GVvLWEIFsyG~QPy~g 708 (774)
T KOG1026|consen 629 LATRNCLVGENLVVKISDFGLSRDIYSSDYYKVRGNTLLPIRWMPPESILYGKFTTESDVWSFGVVLWEIFSYGKQPYYG 708 (774)
T ss_pred hhhhhceeccceEEEecccccchhhhhhhhhcccCCceeeeecCCHHHhhcCcccchhhhhhhhhhhhhhhccccCcccc
Confidence 999999999999999999999998766655544444556899999999999999999999999999999999 8999965
Q ss_pred cCCCCccccHHHHHHHHhcCCCCCccCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCChHHHHHHHhhh
Q 011360 417 HQNGEEICSPEWLRKVMNSKNPSRAIDPRLPGNGYEKKMLHVLKIAYICTLHDPEERPNSQYVRCRLSQL 486 (487)
Q Consensus 417 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~~il~~L~~l 486 (487)
.++. .+...+..+..- ..+. ..+.+++.||..||+.+|++|||+++|-..|+..
T Consensus 709 lSn~-------EVIe~i~~g~lL-~~Pe--------~CP~~vY~LM~~CW~~~P~~RPsF~eI~~~L~~~ 762 (774)
T KOG1026|consen 709 LSNQ-------EVIECIRAGQLL-SCPE--------NCPTEVYSLMLECWNENPKRRPSFKEIHSRLQAW 762 (774)
T ss_pred cchH-------HHHHHHHcCCcc-cCCC--------CCCHHHHHHHHHHhhcCcccCCCHHHHHHHHHHH
Confidence 5542 333444444441 1122 2335699999999999999999999999999763
No 17
>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]
Probab=100.00 E-value=2.3e-43 Score=318.03 Aligned_cols=239 Identities=23% Similarity=0.349 Sum_probs=202.1
Q ss_pred ccccccccccccceeEEEEEecCCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCCCCccccce
Q 011360 193 CFASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQIRHRNILPLLA 272 (487)
Q Consensus 193 ~~~~~~~lg~G~~g~v~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~ 272 (487)
+|+.++.||.|+||.|.+++.+ .+|..+|+|++.. ....+....++..+|-.+++.+.||+++++++
T Consensus 45 dfe~~~tlGtGSFGrV~LVr~k-~~g~yYAmKvL~k------------~~vVklKQveH~~nEk~vL~~v~~PFlv~l~~ 111 (355)
T KOG0616|consen 45 DFERLKTLGTGSFGRVHLVREK-HSGNYYAMKVLDK------------QKVVKLKQVEHTHNEKRVLKAVSHPFLVKLYG 111 (355)
T ss_pred hhhheeeeccCccceEEEEEEc-cCCceeehhhcCH------------HHHHHHHHHHHHhhHHHHHhhccCceeEEEEE
Confidence 5899999999999999999865 5799999998732 33445556778899999999999999999999
Q ss_pred EEecCCeeEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCCEE
Q 011360 273 HMVRPDCHLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVLLNDDMEAC 352 (487)
Q Consensus 273 ~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nill~~~~~~k 352 (487)
.+.+.+.+|+||||++||.|.+++++ .+.+++..++.++.||+.||+|| |+++|++|||||+|||+|.+|.+|
T Consensus 112 t~~d~~~lymvmeyv~GGElFS~Lrk----~~rF~e~~arFYAAeivlAleyl---H~~~iiYRDLKPENiLlD~~G~iK 184 (355)
T KOG0616|consen 112 TFKDNSNLYMVMEYVPGGELFSYLRK----SGRFSEPHARFYAAEIVLALEYL---HSLDIIYRDLKPENLLLDQNGHIK 184 (355)
T ss_pred eeccCCeEEEEEeccCCccHHHHHHh----cCCCCchhHHHHHHHHHHHHHHH---HhcCeeeccCChHHeeeccCCcEE
Confidence 99999999999999999999999976 56799999999999999999999 777899999999999999999999
Q ss_pred EeccCCccccCCCCceeeEeeecccccccCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCccccCCCCccccHHHHHHH
Q 011360 353 ISDLGLAMAIPDGYTRVLISYVLGTMAYIAPEYFQQPELSEKCDIFSFGMLLISLVRGVPSFVFHQNGEEICSPEWLRKV 432 (487)
Q Consensus 353 l~DFg~s~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DvwslG~~l~elltg~~pf~~~~~~~~~~~~~~~~~~ 432 (487)
|+|||+++..... +-+.||||.|+|||++....|+.++|+||||+++|||+.|.+||....+ .....++
T Consensus 185 itDFGFAK~v~~r-----T~TlCGTPeYLAPEii~sk~ynkavDWWalGVLIYEMlaG~pPF~~~~~------~~iY~KI 253 (355)
T KOG0616|consen 185 ITDFGFAKRVSGR-----TWTLCGTPEYLAPEIIQSKGYNKAVDWWALGVLIYEMLAGYPPFYDDNP------IQIYEKI 253 (355)
T ss_pred EEeccceEEecCc-----EEEecCCccccChHHhhcCCCCcchhHHHHHHHHHHHHcCCCCCcCCCh------HHHHHHH
Confidence 9999999887554 2567899999999999999999999999999999999999999954433 2223333
Q ss_pred HhcCCCCCccCCCCCCCCcHHHHHHHHHHHhhccCCCCCCC
Q 011360 433 MNSKNPSRAIDPRLPGNGYEKKMLHVLKIAYICTLHDPEER 473 (487)
Q Consensus 433 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~R 473 (487)
..+. . . +|. ....++.+|+..+|+.|-.+|
T Consensus 254 ~~~~-v--~----fP~----~fs~~~kdLl~~LL~vD~t~R 283 (355)
T KOG0616|consen 254 LEGK-V--K----FPS----YFSSDAKDLLKKLLQVDLTKR 283 (355)
T ss_pred HhCc-c--c----CCc----ccCHHHHHHHHHHHhhhhHhh
Confidence 3322 1 1 221 122458889999999998888
No 18
>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.7e-44 Score=349.95 Aligned_cols=251 Identities=27% Similarity=0.420 Sum_probs=211.7
Q ss_pred ccccccccccccccceeEEEEEecCCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCCCCcccc
Q 011360 191 EDCFASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQIRHRNILPL 270 (487)
Q Consensus 191 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l 270 (487)
...|.....+|+|+.|.||.+. ...+++.||||++.. ......+-+.+|+.+|+..+|+|||++
T Consensus 272 ~~~y~~~~kigqgaSG~vy~A~-~~~~~~~VaiK~m~l---------------~~Q~~keLilnEi~Vm~~~~H~NiVnf 335 (550)
T KOG0578|consen 272 RSKYTDFKKIGQGATGGVYVAR-KISTKQEVAIKRMDL---------------RKQPKKELLLNEILVMRDLHHPNIVNF 335 (550)
T ss_pred hhhhcchhhhccccccceeeee-eccCCceEEEEEEEe---------------ccCCchhhhHHHHHHHHhccchHHHHH
Confidence 3457888899999999999996 567889999999843 222344567899999999999999999
Q ss_pred ceEEecCCeeEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCC
Q 011360 271 LAHMVRPDCHLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVLLNDDME 350 (487)
Q Consensus 271 ~~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nill~~~~~ 350 (487)
++.|...+.+++||||++||+|.|.+.. ..+++.++..+++.+++||+|| |.+||+|||||.+|||++.+|.
T Consensus 336 l~Sylv~deLWVVMEym~ggsLTDvVt~-----~~~~E~qIA~Icre~l~aL~fL---H~~gIiHrDIKSDnILL~~~g~ 407 (550)
T KOG0578|consen 336 LDSYLVGDELWVVMEYMEGGSLTDVVTK-----TRMTEGQIAAICREILQGLKFL---HARGIIHRDIKSDNILLTMDGS 407 (550)
T ss_pred HHHhcccceeEEEEeecCCCchhhhhhc-----ccccHHHHHHHHHHHHHHHHHH---HhcceeeeccccceeEeccCCc
Confidence 9999988999999999999999999874 4589999999999999999999 8889999999999999999999
Q ss_pred EEEeccCCccccCCCCceeeEeeecccccccCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCccccCCCCccccHHHHH
Q 011360 351 ACISDLGLAMAIPDGYTRVLISYVLGTMAYIAPEYFQQPELSEKCDIFSFGMLLISLVRGVPSFVFHQNGEEICSPEWLR 430 (487)
Q Consensus 351 ~kl~DFg~s~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DvwslG~~l~elltg~~pf~~~~~~~~~~~~~~~~ 430 (487)
+||+|||++..+...... ..+.+|||.|||||+.....|+.++||||||++++||+-|.+||....+- ..+.
T Consensus 408 vKltDFGFcaqi~~~~~K--R~TmVGTPYWMAPEVvtrk~YG~KVDIWSLGIMaIEMveGEPPYlnE~Pl------rAly 479 (550)
T KOG0578|consen 408 VKLTDFGFCAQISEEQSK--RSTMVGTPYWMAPEVVTRKPYGPKVDIWSLGIMAIEMVEGEPPYLNENPL------RALY 479 (550)
T ss_pred EEEeeeeeeeccccccCc--cccccCCCCccchhhhhhcccCccccchhhhhHHHHHhcCCCCccCCChH------HHHH
Confidence 999999999887665543 35678999999999999999999999999999999999999999653331 1223
Q ss_pred HHHhcCCCCCccCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCChHHHHH
Q 011360 431 KVMNSKNPSRAIDPRLPGNGYEKKMLHVLKIAYICTLHDPEERPNSQYVRC 481 (487)
Q Consensus 431 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~~il~ 481 (487)
.+...+.|.-...+ ..+..|.+++.+||..||++|||+.++|+
T Consensus 480 LIa~ng~P~lk~~~--------klS~~~kdFL~~cL~~dv~~RasA~eLL~ 522 (550)
T KOG0578|consen 480 LIATNGTPKLKNPE--------KLSPELKDFLDRCLVVDVEQRASAKELLE 522 (550)
T ss_pred HHhhcCCCCcCCcc--------ccCHHHHHHHHHHhhcchhcCCCHHHHhc
Confidence 33334444333332 33467999999999999999999999986
No 19
>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3e-43 Score=347.08 Aligned_cols=254 Identities=26% Similarity=0.347 Sum_probs=205.5
Q ss_pred ccccccccccccccceeEEEEEecCCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCC-CCCccc
Q 011360 191 EDCFASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQIR-HRNILP 269 (487)
Q Consensus 191 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-hpnIv~ 269 (487)
...|.+.+.||.|+||+|++|.+ ..++..||+|++...... ... ......+.+|+.+++.++ ||||++
T Consensus 16 ~g~y~~~~~lG~GsfgkV~~a~~-~~t~~~vAiKii~~~~~~---------~~~-~~~~~~i~rEi~~~~~~~~HpnI~~ 84 (370)
T KOG0583|consen 16 IGKYELGRTLGSGSFGKVKLAKH-RLTGEKVAIKIIDRKKVS---------SKS-QKLDELIKREISILRRLRSHPNIIR 84 (370)
T ss_pred cCceeeeeeecCCCCeeEEEeee-ccCCCeEEEEEechhccc---------ccc-cccchhhHHHHHHHHHhccCCCEeE
Confidence 34699999999999999999975 467899999965321000 001 123455668999999998 999999
Q ss_pred cceEEecCCeeEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCC-
Q 011360 270 LLAHMVRPDCHLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVLLNDD- 348 (487)
Q Consensus 270 l~~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nill~~~- 348 (487)
++.++.....+|+|||||.||+|.+++.. ...+.+..+..+++|++.|++|| |++||+||||||+|||++.+
T Consensus 85 l~ev~~t~~~~~ivmEy~~gGdL~~~i~~----~g~l~E~~ar~~F~Qlisav~y~---H~~gi~HRDLK~ENilld~~~ 157 (370)
T KOG0583|consen 85 LLEVFATPTKIYIVMEYCSGGDLFDYIVN----KGRLKEDEARKYFRQLISAVAYC---HSRGIVHRDLKPENILLDGNE 157 (370)
T ss_pred EEEEEecCCeEEEEEEecCCccHHHHHHH----cCCCChHHHHHHHHHHHHHHHHH---HhCCEeeCCCCHHHEEecCCC
Confidence 99999999999999999999999999975 56788899999999999999999 88899999999999999999
Q ss_pred CCEEEeccCCccccCCCCceeeEeeecccccccCCcccCCCC-CC-chhHHHHHHHHHHHHHhCCCCccccCCCCccccH
Q 011360 349 MEACISDLGLAMAIPDGYTRVLISYVLGTMAYIAPEYFQQPE-LS-EKCDIFSFGMLLISLVRGVPSFVFHQNGEEICSP 426 (487)
Q Consensus 349 ~~~kl~DFg~s~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~-~~-~~~DvwslG~~l~elltg~~pf~~~~~~~~~~~~ 426 (487)
+++||+|||++.... .........+||+.|+|||++.+.. |+ .++||||+|++||.|++|..||.. ...+
T Consensus 158 ~~~Kl~DFG~s~~~~--~~~~~l~t~cGsp~Y~aPEvl~~~~~Y~g~~aDvWS~GViLy~ml~G~~PF~d------~~~~ 229 (370)
T KOG0583|consen 158 GNLKLSDFGLSAISP--GEDGLLKTFCGSPAYAAPEVLSGKGTYSGKAADVWSLGVILYVLLCGRLPFDD------SNVP 229 (370)
T ss_pred CCEEEeccccccccC--CCCCcccCCCCCcccCCHHHhCCCCCcCCchhhhhhhHHHHHHHHhCCCCCCC------ccHH
Confidence 999999999998774 1222336788999999999999877 86 789999999999999999999943 2333
Q ss_pred HHHHHHHhcCCCCCccCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCChHHHH
Q 011360 427 EWLRKVMNSKNPSRAIDPRLPGNGYEKKMLHVLKIAYICTLHDPEERPNSQYVR 480 (487)
Q Consensus 427 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~~il 480 (487)
.....+..... . +|.... +.++..++.+||..||.+|+|+.+|+
T Consensus 230 ~l~~ki~~~~~---~----~p~~~~---S~~~~~Li~~mL~~~P~~R~t~~~i~ 273 (370)
T KOG0583|consen 230 NLYRKIRKGEF---K----IPSYLL---SPEARSLIEKMLVPDPSTRITLLEIL 273 (370)
T ss_pred HHHHHHhcCCc---c----CCCCcC---CHHHHHHHHHHcCCCcccCCCHHHHh
Confidence 33443322221 1 222111 46689999999999999999999997
No 20
>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=5.2e-44 Score=343.35 Aligned_cols=264 Identities=26% Similarity=0.379 Sum_probs=208.8
Q ss_pred hccccccccccccccceeEEEEEecCCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCCCCccc
Q 011360 190 KEDCFASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQIRHRNILP 269 (487)
Q Consensus 190 ~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~ 269 (487)
..+.|+.+++||+|+||.||+|+ +..+|+.||+|++.. ....+.......+|+.+|++|.||||++
T Consensus 115 ~~~~feki~kIGeGTyg~VYkAr-~~~tgkivALKKvr~-------------d~~~~~~~~t~~REI~ILr~l~HpNIik 180 (560)
T KOG0600|consen 115 RADSFEKIEKIGEGTYGQVYKAR-DLETGKIVALKKVRF-------------DNEKEGFPITAIREIKILRRLDHPNIIK 180 (560)
T ss_pred chHHHHHHHHhcCcchhheeEee-ecccCcEEEEEEeec-------------ccCCCcchHHHHHHHHHHHhcCCCcccc
Confidence 45679999999999999999997 567999999999965 2334556677889999999999999999
Q ss_pred cceEEecC--CeeEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCC
Q 011360 270 LLAHMVRP--DCHLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVLLND 347 (487)
Q Consensus 270 l~~~~~~~--~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nill~~ 347 (487)
+.+..... ..+|+|+|||++ +|.-++. ..+-.|++.++..++.|++.||.|| |++||+|||||.+||||+.
T Consensus 181 L~eivt~~~~~siYlVFeYMdh-DL~GLl~---~p~vkft~~qIKc~mkQLl~Gl~~c---H~~gvlHRDIK~SNiLidn 253 (560)
T KOG0600|consen 181 LEEIVTSKLSGSIYLVFEYMDH-DLSGLLS---SPGVKFTEPQIKCYMKQLLEGLEYC---HSRGVLHRDIKGSNILIDN 253 (560)
T ss_pred eeeEEEecCCceEEEEEecccc-hhhhhhc---CCCcccChHHHHHHHHHHHHHHHHH---hhcCeeeccccccceEEcC
Confidence 99998876 689999999976 8888776 3466899999999999999999999 8899999999999999999
Q ss_pred CCCEEEeccCCccccCCCCceeeEeeecccccccCCcccCCC-CCCchhHHHHHHHHHHHHHhCCCCccccCCCCccccH
Q 011360 348 DMEACISDLGLAMAIPDGYTRVLISYVLGTMAYIAPEYFQQP-ELSEKCDIFSFGMLLISLVRGVPSFVFHQNGEEICSP 426 (487)
Q Consensus 348 ~~~~kl~DFg~s~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~-~~~~~~DvwslG~~l~elltg~~pf~~~~~~~~~~~~ 426 (487)
+|.+||+|||+|+.+....... .+..+.|.+|.|||.|.+. .|+.++|+||.|||+.||++|++.|.+.+. .
T Consensus 254 ~G~LKiaDFGLAr~y~~~~~~~-~T~rVvTLWYRpPELLLG~t~Yg~aVDlWS~GCIl~El~~gkPI~~G~tE------v 326 (560)
T KOG0600|consen 254 NGVLKIADFGLARFYTPSGSAP-YTSRVVTLWYRPPELLLGATSYGTAVDLWSVGCILAELFLGKPILQGRTE------V 326 (560)
T ss_pred CCCEEeccccceeeccCCCCcc-cccceEEeeccChHHhcCCcccccceeehhhhHHHHHHHcCCCCcCCccH------H
Confidence 9999999999999776554333 2455689999999988865 899999999999999999999999965542 1
Q ss_pred HHHHHHHh-cCCCCC-ccC-CCCCC-------C--------CcHHHHHHHHHHHhhccCCCCCCCCChHHHHH
Q 011360 427 EWLRKVMN-SKNPSR-AID-PRLPG-------N--------GYEKKMLHVLKIAYICTLHDPEERPNSQYVRC 481 (487)
Q Consensus 427 ~~~~~~~~-~~~~~~-~~~-~~~~~-------~--------~~~~~~~~l~~li~~cl~~~P~~RPs~~~il~ 481 (487)
+.+..++. -+.|.+ .+. ..+|. . .....+...++|+..+|..||.+|.|+.+++.
T Consensus 327 eQl~kIfklcGSP~e~~W~~~kLP~~~~~kp~~~y~r~l~E~~~~~~~~~l~Ll~~lL~ldP~kR~tA~~aL~ 399 (560)
T KOG0600|consen 327 EQLHKIFKLCGSPTEDYWPVSKLPHATIFKPQQPYKRRLRETFKDFPASALDLLEKLLSLDPDKRGTASSALQ 399 (560)
T ss_pred HHHHHHHHHhCCCChhccccccCCcccccCCCCcccchHHHHhccCCHHHHHHHHHHhccCccccccHHHHhc
Confidence 22222221 111111 010 01110 0 12223456778999999999999999998874
No 21
>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V
Probab=100.00 E-value=2.9e-43 Score=348.77 Aligned_cols=266 Identities=26% Similarity=0.364 Sum_probs=204.6
Q ss_pred hccccccccccccccceeEEEEEe----cCCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccC-CC
Q 011360 190 KEDCFASLEKIGSGGCGEVYKAEL----PGSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQI-RH 264 (487)
Q Consensus 190 ~~~~~~~~~~lg~G~~g~v~~~~~----~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h 264 (487)
..++|.+.+.||.|+||.||+|.+ +..++..||+|++... ........+.+|+.++..+ +|
T Consensus 5 ~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~--------------~~~~~~~~~~~E~~~l~~l~~h 70 (338)
T cd05102 5 PRDRLRLGKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEG--------------ATASEHKALMSELKILIHIGNH 70 (338)
T ss_pred chhHceeeeEeccCCcceEEEEEEeccCCcccchhhheeccccc--------------cchHHHHHHHHHHHHHHHhccC
Confidence 345799999999999999999974 2335678999987321 1122345688899999999 89
Q ss_pred CCccccceEEecC-CeeEEEEEecCCCCHHHHHhhhhc------------------------------------------
Q 011360 265 RNILPLLAHMVRP-DCHLLVYEFMKNGSLQDILDDVSR------------------------------------------ 301 (487)
Q Consensus 265 pnIv~l~~~~~~~-~~~~lv~E~~~~gsL~~~l~~~~~------------------------------------------ 301 (487)
|||+++++++... +.++++|||+++|+|.+++.....
T Consensus 71 ~niv~~~~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (338)
T cd05102 71 LNVVNLLGACTKPNGPLMVIVEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRVDRRIEAGQASVLFSRFQ 150 (338)
T ss_pred cceeeEEeEecCCCCceEEEEecCCCCcHHHHHHhcchhcccccccchhhhhhhhhhhhhhccccccccccCCccccccc
Confidence 9999999988764 468899999999999999874211
Q ss_pred ----------------CCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCCEEEeccCCccccCCC
Q 011360 302 ----------------GRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVLLNDDMEACISDLGLAMAIPDG 365 (487)
Q Consensus 302 ----------------~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nill~~~~~~kl~DFg~s~~~~~~ 365 (487)
....+++..+..++.|++.||.|| |++||+||||||+|||++.++.+||+|||+++.....
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~L---H~~~ivHrDiKp~Nil~~~~~~~kl~DfG~a~~~~~~ 227 (338)
T cd05102 151 PSTSGSTNPPQETDDLWKSPLTMEDLICYSFQVARGMEFL---ASRKCIHRDLAARNILLSENNVVKICDFGLARDIYKD 227 (338)
T ss_pred cccCcccccchhccccccCCCCHHHHHHHHHHHHHHHHHH---HHCCEECCCCccceEEEcCCCcEEEeecccccccccC
Confidence 023577888999999999999999 6788999999999999999999999999999765433
Q ss_pred CceeeEeeecccccccCCcccCCCCCCchhHHHHHHHHHHHHHh-CCCCccccCCCCccccHHHHHHHHhcCCCCCccCC
Q 011360 366 YTRVLISYVLGTMAYIAPEYFQQPELSEKCDIFSFGMLLISLVR-GVPSFVFHQNGEEICSPEWLRKVMNSKNPSRAIDP 444 (487)
Q Consensus 366 ~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DvwslG~~l~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 444 (487)
..........+++.|+|||++.+..++.++||||||+++|||++ |..||...... ..... ....+...
T Consensus 228 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il~el~~~g~~pf~~~~~~-----~~~~~-~~~~~~~~----- 296 (338)
T cd05102 228 PDYVRKGSARLPLKWMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQIN-----EEFCQ-RLKDGTRM----- 296 (338)
T ss_pred cchhcccCCCCCccccCcHHhhcCCCCcccCHHHHHHHHHHHHhCCCCCCCCCCcc-----HHHHH-HHhcCCCC-----
Confidence 22222223346788999999998899999999999999999997 99999543221 11222 22222111
Q ss_pred CCCCCCcHHHHHHHHHHHhhccCCCCCCCCChHHHHHHHhhhC
Q 011360 445 RLPGNGYEKKMLHVLKIAYICTLHDPEERPNSQYVRCRLSQLL 487 (487)
Q Consensus 445 ~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~~il~~L~~ll 487 (487)
..+. ..+..+.+++.+||+.||++|||+.+|++.|++++
T Consensus 297 ~~~~----~~~~~l~~li~~cl~~dp~~RPs~~el~~~l~~~~ 335 (338)
T cd05102 297 RAPE----NATPEIYRIMLACWQGDPKERPTFSALVEILGDLL 335 (338)
T ss_pred CCCC----CCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence 1111 12346889999999999999999999999999864
No 22
>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]
Probab=100.00 E-value=1.3e-43 Score=343.51 Aligned_cols=256 Identities=23% Similarity=0.369 Sum_probs=205.1
Q ss_pred ccccccccccccccceeEEEEEecCCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCCCCcccc
Q 011360 191 EDCFASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQIRHRNILPL 270 (487)
Q Consensus 191 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l 270 (487)
.++|.+++.||+|+||.||+|+ .+.+|..+|+|++. +..-.....++.++.|-.+|....+|+||++
T Consensus 140 ~~DFe~Lk~IgkGAfGeVrLar-Kk~Tg~iyAmK~Lk------------KS~M~~~~Qv~hV~aERdiL~~~ds~~vVKL 206 (550)
T KOG0605|consen 140 LDDFELLKVIGKGAFGEVRLAR-KKDTGEIYAMKILK------------KSEMLKKNQVEHVRAERDILAEVDSPWVVKL 206 (550)
T ss_pred cccchhheeeccccceeEEEEE-EccCCcEEeeeccc------------HHHHHhhhhHHHHHHHHHHhhhcCCCcEEEE
Confidence 3469999999999999999997 56799999999874 2344556678889999999999999999999
Q ss_pred ceEEecCCeeEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCC
Q 011360 271 LAHMVRPDCHLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVLLNDDME 350 (487)
Q Consensus 271 ~~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nill~~~~~ 350 (487)
|..|.+.+++||||||++||++..+|.. ...+++..++.++.+.+.|+..+ |..|+|||||||+|+|||..|+
T Consensus 207 yYsFQD~~~LYLiMEylPGGD~mTLL~~----~~~L~e~~arfYiaE~vlAI~~i---H~~gyIHRDIKPdNlLiD~~GH 279 (550)
T KOG0605|consen 207 YYSFQDKEYLYLIMEYLPGGDMMTLLMR----KDTLTEDWARFYIAETVLAIESI---HQLGYIHRDIKPDNLLIDAKGH 279 (550)
T ss_pred EEEecCCCeeEEEEEecCCccHHHHHHh----cCcCchHHHHHHHHHHHHHHHHH---HHcCcccccCChhheeecCCCC
Confidence 9999999999999999999999999975 67899999999999999999999 8899999999999999999999
Q ss_pred EEEeccCCccccCCC-----------------------Cc-----ee-----------------eEeeecccccccCCcc
Q 011360 351 ACISDLGLAMAIPDG-----------------------YT-----RV-----------------LISYVLGTMAYIAPEY 385 (487)
Q Consensus 351 ~kl~DFg~s~~~~~~-----------------------~~-----~~-----------------~~~~~~gt~~y~aPE~ 385 (487)
+||+|||+|.-+... .. .. .....+|||.|+|||+
T Consensus 280 iKLSDFGLs~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~nrr~~a~StVGTPDYiAPEV 359 (550)
T KOG0605|consen 280 IKLSDFGLSTGLDKKHRIESYRLDEQMQINLSEAKPSDFPKFNTPRSTMSRREQLQTWKRNRRQLAYSTVGTPDYIAPEV 359 (550)
T ss_pred EeeccccccchhhhhhhhhhhcchhhhhhhhccCCCccccccccccchhhHHHHHHHHHhhhhhhhhcccCCccccchHH
Confidence 999999998533110 00 00 0012579999999999
Q ss_pred cCCCCCCchhHHHHHHHHHHHHHhCCCCccccCCCCccccHHHHHHHHhcCCCCCccCCCCCCCCcHHHHHHHHHHHhhc
Q 011360 386 FQQPELSEKCDIFSFGMLLISLVRGVPSFVFHQNGEEICSPEWLRKVMNSKNPSRAIDPRLPGNGYEKKMLHVLKIAYIC 465 (487)
Q Consensus 386 l~~~~~~~~~DvwslG~~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c 465 (487)
+.+..|+..+|+||||||+|||+.|.+||...++.. -.+.++.-... -..+. ....+.+..++|++|
T Consensus 360 ll~kgY~~~cDwWSLG~ImyEmLvGyPPF~s~tp~~------T~rkI~nwr~~-l~fP~------~~~~s~eA~DLI~rl 426 (550)
T KOG0605|consen 360 LLGKGYGKECDWWSLGCIMYEMLVGYPPFCSETPQE------TYRKIVNWRET-LKFPE------EVDLSDEAKDLITRL 426 (550)
T ss_pred HhcCCCCccccHHHHHHHHHHHHhCCCCCCCCCHHH------HHHHHHHHhhh-ccCCC------cCcccHHHHHHHHHH
Confidence 999999999999999999999999999996554422 12222221110 00011 112226788999999
Q ss_pred cCCCCCCCCC---hHHHH
Q 011360 466 TLHDPEERPN---SQYVR 480 (487)
Q Consensus 466 l~~~P~~RPs---~~~il 480 (487)
+. ||++|.. ++||.
T Consensus 427 l~-d~~~RLG~~G~~EIK 443 (550)
T KOG0605|consen 427 LC-DPENRLGSKGAEEIK 443 (550)
T ss_pred hc-CHHHhcCcccHHHHh
Confidence 99 9999975 55554
No 23
>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]
Probab=100.00 E-value=1.5e-43 Score=343.15 Aligned_cols=249 Identities=26% Similarity=0.407 Sum_probs=211.6
Q ss_pred cccccccccccccceeEEEEEecCCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCCCCccccc
Q 011360 192 DCFASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQIRHRNILPLL 271 (487)
Q Consensus 192 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~ 271 (487)
++|.+.+.||+|.||.||+|+ ++.+.+.||+|.+.. ....+...+.+.+|+++++.++|||||.++
T Consensus 2 e~yhv~e~iG~Gsfg~VYKgr-rK~t~~~vAik~i~K-------------~gr~~k~l~~l~~ev~i~r~lkHpniv~m~ 67 (808)
T KOG0597|consen 2 EQYHVYEMIGEGSFGRVYKGR-RKYTIQVVAIKFIDK-------------SGRNEKELKNLRQEVRILRSLKHPNIVEML 67 (808)
T ss_pred cchhHHHHhcCCccceeeecc-cccceeEEEEEEehh-------------cCCchHHHHHHHHHHHHHHhcCCcchhhHH
Confidence 358899999999999999997 567899999998732 233345678899999999999999999999
Q ss_pred eEEecCCeeEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCCE
Q 011360 272 AHMVRPDCHLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVLLNDDMEA 351 (487)
Q Consensus 272 ~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nill~~~~~~ 351 (487)
++|....++++|+|||.| +|..+|.. ...++++.+..++.+++.||.|| |+.+|+|||+||.|||+..+|.+
T Consensus 68 esfEt~~~~~vVte~a~g-~L~~il~~----d~~lpEe~v~~~a~~LVsaL~yL---hs~rilhrd~kPqniLl~~~~~~ 139 (808)
T KOG0597|consen 68 ESFETSAHLWVVTEYAVG-DLFTILEQ----DGKLPEEQVRAIAYDLVSALYYL---HSNRILHRDMKPQNILLEKGGTL 139 (808)
T ss_pred HhhcccceEEEEehhhhh-hHHHHHHh----ccCCCHHHHHHHHHHHHHHHHHH---HhcCcccccCCcceeeecCCCce
Confidence 999999999999999966 99999976 67899999999999999999999 88899999999999999999999
Q ss_pred EEeccCCccccCCCCceeeEeeecccccccCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCccccCCCCccccHHHHHH
Q 011360 352 CISDLGLAMAIPDGYTRVLISYVLGTMAYIAPEYFQQPELSEKCDIFSFGMLLISLVRGVPSFVFHQNGEEICSPEWLRK 431 (487)
Q Consensus 352 kl~DFg~s~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DvwslG~~l~elltg~~pf~~~~~~~~~~~~~~~~~ 431 (487)
|+||||+++.+..+ ....+.+.|||-|||||.+.+..|+..+|+||+||++||+++|++||.. ....+.+..
T Consensus 140 KlcdFg~Ar~m~~~--t~vltsikGtPlYmAPElv~e~pyd~~sDlWslGcilYE~~~G~PPF~a------~si~~Lv~~ 211 (808)
T KOG0597|consen 140 KLCDFGLARAMSTN--TSVLTSIKGTPLYMAPELVEEQPYDHTSDLWSLGCILYELYVGQPPFYA------RSITQLVKS 211 (808)
T ss_pred eechhhhhhhcccC--ceeeeeccCcccccCHHHHcCCCccchhhHHHHHHHHHHHhcCCCCchH------HHHHHHHHH
Confidence 99999999987653 3344677899999999999999999999999999999999999999932 222334444
Q ss_pred HHhcCCCCCccCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCChHHHHH
Q 011360 432 VMNSKNPSRAIDPRLPGNGYEKKMLHVLKIAYICTLHDPEERPNSQYVRC 481 (487)
Q Consensus 432 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~~il~ 481 (487)
+..+... .| ...+..+..++...|.+||..|.|..+++.
T Consensus 212 I~~d~v~-------~p----~~~S~~f~nfl~gLL~kdP~~RltW~~Ll~ 250 (808)
T KOG0597|consen 212 ILKDPVK-------PP----STASSSFVNFLQGLLIKDPAQRLTWTDLLG 250 (808)
T ss_pred HhcCCCC-------Cc----ccccHHHHHHHHHHhhcChhhcccHHHHhc
Confidence 4332211 11 144567999999999999999999998864
No 24
>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]
Probab=100.00 E-value=1e-43 Score=348.01 Aligned_cols=266 Identities=24% Similarity=0.380 Sum_probs=213.0
Q ss_pred HHhhhccccccccccccccceeEEEEEecCCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCCC
Q 011360 186 AFLKKEDCFASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQIRHR 265 (487)
Q Consensus 186 ~~~~~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp 265 (487)
.|....+.+.+...||.|.||+||+|.|.+ .||||++... ...+...+.|++|+.++++-+|.
T Consensus 386 ~WeIp~~ev~l~~rIGsGsFGtV~Rg~whG----dVAVK~Lnv~-------------~pt~~qlqaFKnEVa~lkkTRH~ 448 (678)
T KOG0193|consen 386 EWEIPPEEVLLGERIGSGSFGTVYRGRWHG----DVAVKLLNVD-------------DPTPEQLQAFKNEVAVLKKTRHE 448 (678)
T ss_pred ccccCHHHhhccceeccccccceeeccccc----ceEEEEEecC-------------CCCHHHHHHHHHHHHHHhhcchh
Confidence 345555568889999999999999999853 5999999653 33455788999999999999999
Q ss_pred CccccceEEecCCeeEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEe
Q 011360 266 NILPLLAHMVRPDCHLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVLL 345 (487)
Q Consensus 266 nIv~l~~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nill 345 (487)
||+-|.|++..+.. .||+.+|+|-+|..++... ...|...+...|++||++|+.|| |.++|||||||..||++
T Consensus 449 NIlLFMG~~~~p~~-AIiTqwCeGsSLY~hlHv~---etkfdm~~~idIAqQiaqGM~YL---HAK~IIHrDLKSnNIFl 521 (678)
T KOG0193|consen 449 NILLFMGACMNPPL-AIITQWCEGSSLYTHLHVQ---ETKFDMNTTIDIAQQIAQGMDYL---HAKNIIHRDLKSNNIFL 521 (678)
T ss_pred hheeeehhhcCCce-eeeehhccCchhhhhccch---hhhhhHHHHHHHHHHHHHhhhhh---hhhhhhhhhccccceEE
Confidence 99999999998877 8999999999999999753 46788899999999999999999 88999999999999999
Q ss_pred CCCCCEEEeccCCccccCCCCceeeEeeecccccccCCcccCC---CCCCchhHHHHHHHHHHHHHhCCCCccccCCCCc
Q 011360 346 NDDMEACISDLGLAMAIPDGYTRVLISYVLGTMAYIAPEYFQQ---PELSEKCDIFSFGMLLISLVRGVPSFVFHQNGEE 422 (487)
Q Consensus 346 ~~~~~~kl~DFg~s~~~~~~~~~~~~~~~~gt~~y~aPE~l~~---~~~~~~~DvwslG~~l~elltg~~pf~~~~~~~~ 422 (487)
.++++|||+|||++..-.............|...|||||++.. .+|+..+|||||||++|||+||..||.....+..
T Consensus 522 ~~~~kVkIgDFGLatvk~~w~g~~q~~qp~gsilwmAPEvIRmqd~nPfS~qSDVYaFGiV~YELltg~lPysi~~~dqI 601 (678)
T KOG0193|consen 522 HEDLKVKIGDFGLATVKTRWSGEQQLEQPHGSLLWMAPEVIRMQDDNPFSFQSDVYAFGIVWYELLTGELPYSIQNRDQI 601 (678)
T ss_pred ccCCcEEEecccceeeeeeeccccccCCCccchhhhcHHHHhhcccCCCCcccchhhhhHHHHHHHhCcCCcCCCChhhe
Confidence 9999999999999875433322222234558889999999874 3799999999999999999999999963322221
Q ss_pred cccHHHHHHHHhcCCCCCccCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCChHHHHHHHhhhC
Q 011360 423 ICSPEWLRKVMNSKNPSRAIDPRLPGNGYEKKMLHVLKIAYICTLHDPEERPNSQYVRCRLSQLL 487 (487)
Q Consensus 423 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~~il~~L~~ll 487 (487)
+ +..++.....|. ........+++.+|+..||.+++++||++.+|+..|+.++
T Consensus 602 i---------fmVGrG~l~pd~---s~~~s~~pk~mk~Ll~~C~~~~~~eRP~F~~il~~l~~l~ 654 (678)
T KOG0193|consen 602 I---------FMVGRGYLMPDL---SKIRSNCPKAMKRLLSDCWKFDREERPLFPQLLSKLEELL 654 (678)
T ss_pred E---------EEecccccCccc---hhhhccCHHHHHHHHHHHHhcCcccCccHHHHHHHHHHhh
Confidence 1 112222111111 1233445577889999999999999999999999888764
No 25
>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]
Probab=100.00 E-value=1.1e-42 Score=309.35 Aligned_cols=264 Identities=27% Similarity=0.377 Sum_probs=207.4
Q ss_pred cccccccccccccceeEEEEEecCCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCCCCccccc
Q 011360 192 DCFASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQIRHRNILPLL 271 (487)
Q Consensus 192 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~ 271 (487)
++|...+.+|+|.||.||+|+ +..+|+.||||++... ..+........+|+..++.++||||+.++
T Consensus 2 ~rY~~~~~lGEG~~gvVyka~-d~~t~~~VAIKKIkl~-------------~~kdGi~~talREIK~Lqel~h~nIi~Li 67 (318)
T KOG0659|consen 2 DRYEKLEKLGEGTYGVVYKAR-DTETGKRVAIKKIKLG-------------NAKDGINRTALREIKLLQELKHPNIIELI 67 (318)
T ss_pred chhhhhhhhcCcceEEEEEEE-ecCCCcEEEEEEeecc-------------ccccCccHHHHHHHHHHHHccCcchhhhh
Confidence 358889999999999999997 5679999999999653 22233345678999999999999999999
Q ss_pred eEEecCCeeEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCCE
Q 011360 272 AHMVRPDCHLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVLLNDDMEA 351 (487)
Q Consensus 272 ~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nill~~~~~~ 351 (487)
++|.+.+.+.+|+||++. +|...++. ....++...+..++.++++|++|| |++.|+||||||.|+|++.+|.+
T Consensus 68 D~F~~~~~l~lVfEfm~t-dLe~vIkd---~~i~l~pa~iK~y~~m~LkGl~y~---H~~~IlHRDlKPnNLLis~~g~l 140 (318)
T KOG0659|consen 68 DVFPHKSNLSLVFEFMPT-DLEVVIKD---KNIILSPADIKSYMLMTLKGLAYC---HSKWILHRDLKPNNLLISSDGQL 140 (318)
T ss_pred hhccCCCceEEEEEeccc-cHHHHhcc---cccccCHHHHHHHHHHHHHHHHHH---HhhhhhcccCCccceEEcCCCcE
Confidence 999999999999999954 89988874 467789999999999999999999 78889999999999999999999
Q ss_pred EEeccCCccccCCCCceeeEeeecccccccCCcccCCC-CCCchhHHHHHHHHHHHHHhCCCCccccCCCCccccHHHHH
Q 011360 352 CISDLGLAMAIPDGYTRVLISYVLGTMAYIAPEYFQQP-ELSEKCDIFSFGMLLISLVRGVPSFVFHQNGEEICSPEWLR 430 (487)
Q Consensus 352 kl~DFg~s~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~-~~~~~~DvwslG~~l~elltg~~pf~~~~~~~~~~~~~~~~ 430 (487)
||+|||+++.+....... ...+.|.+|.|||.+.+. .|+..+|+||.||++.||+.|.+-|.+.++-+.. ..+-
T Consensus 141 KiADFGLAr~f~~p~~~~--~~~V~TRWYRAPELLfGsr~Yg~~VDmWavGCI~AELllr~P~fpG~sDidQL---~~If 215 (318)
T KOG0659|consen 141 KIADFGLARFFGSPNRIQ--THQVVTRWYRAPELLFGSRQYGTGVDMWAVGCIFAELLLRVPFFPGDSDIDQL---SKIF 215 (318)
T ss_pred EeecccchhccCCCCccc--ccceeeeeccChHHhccchhcCCcchhhhHHHHHHHHHccCCCCCCCchHHHH---HHHH
Confidence 999999999887654433 233679999999988765 7999999999999999999999888655431111 1111
Q ss_pred HHHhcCCCCCccC-------------CCCC-CCCcHHHHHHHHHHHhhccCCCCCCCCChHHHHH
Q 011360 431 KVMNSKNPSRAID-------------PRLP-GNGYEKKMLHVLKIAYICTLHDPEERPNSQYVRC 481 (487)
Q Consensus 431 ~~~~~~~~~~~~~-------------~~~~-~~~~~~~~~~l~~li~~cl~~~P~~RPs~~~il~ 481 (487)
..+....+....+ |..+ ....+..+.+..+++..+|..||.+|+|++|.++
T Consensus 216 ~~LGTP~~~~WP~~~~lpdY~~~~~~P~~~~~~lf~aas~d~ldLl~~m~~ynP~~Rita~qaL~ 280 (318)
T KOG0659|consen 216 RALGTPTPDQWPEMTSLPDYVKIQQFPKPPLNNLFPAASSDALDLLSKMLTYNPKKRITASQALK 280 (318)
T ss_pred HHcCCCCcccCccccccccHHHHhcCCCCccccccccccHHHHHHHHhhhccCchhcccHHHHhc
Confidence 1111111111000 0000 1133445567899999999999999999999875
No 26
>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]
Probab=100.00 E-value=6.6e-44 Score=345.53 Aligned_cols=249 Identities=27% Similarity=0.406 Sum_probs=203.3
Q ss_pred HhhhccccccccccccccceeEEEEEecCCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCCCC
Q 011360 187 FLKKEDCFASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQIRHRN 266 (487)
Q Consensus 187 ~~~~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpn 266 (487)
|...-+.+.-++.||.|+-|.||+|++ .++.||||++. +.-..++.-|++|+|||
T Consensus 119 WeiPFe~IsELeWlGSGaQGAVF~Grl---~netVAVKKV~----------------------elkETdIKHLRkLkH~N 173 (904)
T KOG4721|consen 119 WEIPFEEISELEWLGSGAQGAVFLGRL---HNETVAVKKVR----------------------ELKETDIKHLRKLKHPN 173 (904)
T ss_pred ccCCHHHhhhhhhhccCcccceeeeec---cCceehhHHHh----------------------hhhhhhHHHHHhccCcc
Confidence 444344466678899999999999997 57889999762 12235777899999999
Q ss_pred ccccceEEecCCeeEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeC
Q 011360 267 ILPLLAHMVRPDCHLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVLLN 346 (487)
Q Consensus 267 Iv~l~~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nill~ 346 (487)
|+.|.|+|....++|||||||..|.|...|+. +..+.......+..+||.|+.|| |.+.|||||||.-||||+
T Consensus 174 II~FkGVCtqsPcyCIiMEfCa~GqL~~VLka----~~~itp~llv~Wsk~IA~GM~YL---H~hKIIHRDLKSPNiLIs 246 (904)
T KOG4721|consen 174 IITFKGVCTQSPCYCIIMEFCAQGQLYEVLKA----GRPITPSLLVDWSKGIAGGMNYL---HLHKIIHRDLKSPNILIS 246 (904)
T ss_pred eeeEeeeecCCceeEEeeeccccccHHHHHhc----cCccCHHHHHHHHHHhhhhhHHH---HHhhHhhhccCCCceEee
Confidence 99999999999999999999999999999975 67788889999999999999999 667799999999999999
Q ss_pred CCCCEEEeccCCccccCCCCceeeEeeecccccccCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCccccCCCCccccH
Q 011360 347 DDMEACISDLGLAMAIPDGYTRVLISYVLGTMAYIAPEYFQQPELSEKCDIFSFGMLLISLVRGVPSFVFHQNGEEICSP 426 (487)
Q Consensus 347 ~~~~~kl~DFg~s~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DvwslG~~l~elltg~~pf~~~~~~~~~~~~ 426 (487)
.+..|||+|||-++......+ ...++||..|||||++.+.+.+.|+||||||++||||+||..||..-+....+
T Consensus 247 ~~d~VKIsDFGTS~e~~~~ST---kMSFaGTVaWMAPEvIrnePcsEKVDIwSfGVVLWEmLT~EiPYkdVdssAII--- 320 (904)
T KOG4721|consen 247 YDDVVKISDFGTSKELSDKST---KMSFAGTVAWMAPEVIRNEPCSEKVDIWSFGVVLWEMLTGEIPYKDVDSSAII--- 320 (904)
T ss_pred ccceEEeccccchHhhhhhhh---hhhhhhhHhhhCHHHhhcCCcccccceehhHHHHHHHHhcCCCccccchheeE---
Confidence 999999999999987655422 24578999999999999999999999999999999999999999432221111
Q ss_pred HHHHHHHhcCCCCCccCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCChHHHHHHHhh
Q 011360 427 EWLRKVMNSKNPSRAIDPRLPGNGYEKKMLHVLKIAYICTLHDPEERPNSQYVRCRLSQ 485 (487)
Q Consensus 427 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~~il~~L~~ 485 (487)
. -+..+.....++..+| .-|.-|++.||+-.|.+||||.+|+..|+-
T Consensus 321 ---w-GVGsNsL~LpvPstcP--------~GfklL~Kqcw~sKpRNRPSFrqil~HldI 367 (904)
T KOG4721|consen 321 ---W-GVGSNSLHLPVPSTCP--------DGFKLLLKQCWNSKPRNRPSFRQILLHLDI 367 (904)
T ss_pred ---E-eccCCcccccCcccCc--------hHHHHHHHHHHhcCCCCCccHHHHHHHHhh
Confidence 0 0112333333334444 348888999999999999999999988763
No 27
>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=6.1e-43 Score=326.69 Aligned_cols=249 Identities=24% Similarity=0.393 Sum_probs=211.6
Q ss_pred cccccccccccccceeEEEEEecCCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCCCCccccc
Q 011360 192 DCFASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQIRHRNILPLL 271 (487)
Q Consensus 192 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~ 271 (487)
.+|++.+.||.|.||+|-+|. ....|+.||||.+. ++....+..+-.+++|+++|..|+||||+.+|
T Consensus 53 HRyE~~etLGkGTYGKVk~A~-e~~sgR~VAiKsIr------------KdkIkdeqDlvhIRREIeIMSsLNHPhII~Iy 119 (668)
T KOG0611|consen 53 HRYEITETLGKGTYGKVKLAY-EHKSGREVAIKSIR------------KDKIKDEQDLVHIRREIEIMSSLNHPHIIQIY 119 (668)
T ss_pred hHHHHHHHhcCCcccceeehh-hccCCcEeehhhhh------------hhhcccHHHHHHHHHHHHHHhhcCCCceeehh
Confidence 369999999999999999995 55689999999663 44555666788899999999999999999999
Q ss_pred eEEecCCeeEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCCE
Q 011360 272 AHMVRPDCHLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVLLNDDMEA 351 (487)
Q Consensus 272 ~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nill~~~~~~ 351 (487)
.+|.+.+.+.|||||..+|.|.||+.. .+.+++..++++++||++|+.|+ |.++++|||||.+|||++.|+++
T Consensus 120 EVFENkdKIvivMEYaS~GeLYDYiSe----r~~LsErEaRhfFRQIvSAVhYC---HknrVvHRDLKLENILLD~N~Ni 192 (668)
T KOG0611|consen 120 EVFENKDKIVIVMEYASGGELYDYISE----RGSLSEREARHFFRQIVSAVHYC---HKNRVVHRDLKLENILLDQNNNI 192 (668)
T ss_pred hhhcCCceEEEEEEecCCccHHHHHHH----hccccHHHHHHHHHHHHHHHHHH---hhccceecccchhheeecCCCCe
Confidence 999999999999999999999999976 57799999999999999999999 88899999999999999999999
Q ss_pred EEeccCCccccCCCCceeeEeeecccccccCCcccCCCCC-CchhHHHHHHHHHHHHHhCCCCccccCCCCccccHHHHH
Q 011360 352 CISDLGLAMAIPDGYTRVLISYVLGTMAYIAPEYFQQPEL-SEKCDIFSFGMLLISLVRGVPSFVFHQNGEEICSPEWLR 430 (487)
Q Consensus 352 kl~DFg~s~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~-~~~~DvwslG~~l~elltg~~pf~~~~~~~~~~~~~~~~ 430 (487)
||+|||++..+..... ..++||+|-|.+||++.+.+| ++.+|-||||++||-|..|..||.+.+. -..++
T Consensus 193 KIADFGLSNly~~~kf---LqTFCGSPLYASPEIvNG~PY~GPEVDsWsLGvLLYtLVyGtMPFDG~Dh------k~lvr 263 (668)
T KOG0611|consen 193 KIADFGLSNLYADKKF---LQTFCGSPLYASPEIVNGTPYKGPEVDSWSLGVLLYTLVYGTMPFDGRDH------KRLVR 263 (668)
T ss_pred eeeccchhhhhccccH---HHHhcCCcccCCccccCCCCCCCCccchhhHHHHHHHHhhcccccCCchH------HHHHH
Confidence 9999999987655432 357899999999999999888 5789999999999999999999955433 12233
Q ss_pred HHHhcCCCCCccCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCChHHHHH
Q 011360 431 KVMNSKNPSRAIDPRLPGNGYEKKMLHVLKIAYICTLHDPEERPNSQYVRC 481 (487)
Q Consensus 431 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~~il~ 481 (487)
++ ..+... .|.-|+ +..-||++||-.||++|.|+.+|..
T Consensus 264 QI-s~GaYr---EP~~PS--------dA~gLIRwmLmVNP~RRATieDiAs 302 (668)
T KOG0611|consen 264 QI-SRGAYR---EPETPS--------DASGLIRWMLMVNPERRATIEDIAS 302 (668)
T ss_pred Hh-hccccc---CCCCCc--------hHHHHHHHHHhcCcccchhHHHHhh
Confidence 33 333222 222332 3778999999999999999999865
No 28
>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.5e-42 Score=330.60 Aligned_cols=267 Identities=27% Similarity=0.351 Sum_probs=203.1
Q ss_pred hccccccccccccccceeEEEEEecCCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCCCCccc
Q 011360 190 KEDCFASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQIRHRNILP 269 (487)
Q Consensus 190 ~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~ 269 (487)
.-++|++.+.||.|.||+|-+|+ +..+++.||||++....-. ................+...+|+.+|+++.|||||+
T Consensus 95 ~lNqy~l~~eiG~G~yGkVkLar-~~~~~~l~AiKil~K~~~~-~~~~~~~~~a~~~~~~ekv~~EIailKkl~H~nVV~ 172 (576)
T KOG0585|consen 95 QLNQYELIKEIGSGQYGKVKLAR-DEVDGKLYAIKILPKKELR-RQYGFPRQPAMKLMPIEKVRREIAILKKLHHPNVVK 172 (576)
T ss_pred ehhheehhhhhcCCccceEEEEe-ecCCCcEEEEEeechhhhh-hhcccccccccccCcHHHHHHHHHHHHhcCCcCeeE
Confidence 45679999999999999999996 5678999999998432100 000000111122234568899999999999999999
Q ss_pred cceEEecC--CeeEEEEEecCCCCHHHHHhhhhcCCCC-CChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeC
Q 011360 270 LLAHMVRP--DCHLLVYEFMKNGSLQDILDDVSRGRRE-LDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVLLN 346 (487)
Q Consensus 270 l~~~~~~~--~~~~lv~E~~~~gsL~~~l~~~~~~~~~-l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nill~ 346 (487)
++.+..++ +.+|||+|||..|.+... ....+ +++.++++++++++.||.|| |.+|||||||||+|+|++
T Consensus 173 LiEvLDDP~s~~~YlVley~s~G~v~w~-----p~d~~els~~~Ar~ylrDvv~GLEYL---H~QgiiHRDIKPsNLLl~ 244 (576)
T KOG0585|consen 173 LIEVLDDPESDKLYLVLEYCSKGEVKWC-----PPDKPELSEQQARKYLRDVVLGLEYL---HYQGIIHRDIKPSNLLLS 244 (576)
T ss_pred EEEeecCcccCceEEEEEeccCCccccC-----CCCcccccHHHHHHHHHHHHHHHHHH---HhcCeeccccchhheEEc
Confidence 99999875 678999999999887543 22344 89999999999999999999 888999999999999999
Q ss_pred CCCCEEEeccCCccccCCCCc---eeeEeeecccccccCCcccCCC----CCCchhHHHHHHHHHHHHHhCCCCccccCC
Q 011360 347 DDMEACISDLGLAMAIPDGYT---RVLISYVLGTMAYIAPEYFQQP----ELSEKCDIFSFGMLLISLVRGVPSFVFHQN 419 (487)
Q Consensus 347 ~~~~~kl~DFg~s~~~~~~~~---~~~~~~~~gt~~y~aPE~l~~~----~~~~~~DvwslG~~l~elltg~~pf~~~~~ 419 (487)
++|++||+|||.+.....+.. ........|||.|+|||...++ ..+.+.||||+|++||.|+.|+.||...
T Consensus 245 ~~g~VKIsDFGVs~~~~~~~~~~~d~~L~~tvGTPAF~APE~c~~~~~~~~~g~a~DiWalGVTLYCllfG~~PF~~~-- 322 (576)
T KOG0585|consen 245 SDGTVKISDFGVSNEFPQGSDEGSDDQLSRTVGTPAFFAPELCSGGNSFSYSGFALDIWALGVTLYCLLFGQLPFFDD-- 322 (576)
T ss_pred CCCcEEeeccceeeecccCCccccHHHHhhcCCCccccchHhhcCCCCccccchhhhhhhhhhhHHHhhhccCCcccc--
Confidence 999999999999987643311 1112346799999999987763 2357889999999999999999999332
Q ss_pred CCccccHHHHHHHHhcCCCCCccCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCChHHHHH
Q 011360 420 GEEICSPEWLRKVMNSKNPSRAIDPRLPGNGYEKKMLHVLKIAYICTLHDPEERPNSQYVRC 481 (487)
Q Consensus 420 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~~il~ 481 (487)
...+...++.... +......++...+.++|.++|.+||+.|.+..+|..
T Consensus 323 ----~~~~l~~KIvn~p---------L~fP~~pe~~e~~kDli~~lL~KdP~~Ri~l~~ik~ 371 (576)
T KOG0585|consen 323 ----FELELFDKIVNDP---------LEFPENPEINEDLKDLIKRLLEKDPEQRITLPDIKL 371 (576)
T ss_pred ----hHHHHHHHHhcCc---------ccCCCcccccHHHHHHHHHHhhcChhheeehhhhee
Confidence 2334444443321 111222244567889999999999999999998753
No 29
>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.2e-42 Score=364.85 Aligned_cols=263 Identities=25% Similarity=0.393 Sum_probs=216.3
Q ss_pred cccccccccccccceeEEEEEecCCCCc----eEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCCCCc
Q 011360 192 DCFASLEKIGSGGCGEVYKAELPGSNGK----MIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQIRHRNI 267 (487)
Q Consensus 192 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~----~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnI 267 (487)
+.......||+|.||.||.|.+...++. .||+|.+.. ..+......|.+|+.+|+.++||||
T Consensus 692 ~~v~l~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~--------------~~~~~~~~~Fl~Ea~~m~~f~HpNi 757 (1025)
T KOG1095|consen 692 KNVTLLRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKR--------------LSSEQEVSDFLKEALLMSKFDHPNI 757 (1025)
T ss_pred hheEeeeeeccccccceEEEEEecCCCCccceEEEEEeccc--------------cCCHHHHHHHHHHHHHHhcCCCcce
Confidence 3467788999999999999998766665 489998733 3445677889999999999999999
Q ss_pred cccceEEecCCeeEEEEEecCCCCHHHHHhhhhc---CCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEE
Q 011360 268 LPLLAHMVRPDCHLLVYEFMKNGSLQDILDDVSR---GRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVL 344 (487)
Q Consensus 268 v~l~~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~---~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nil 344 (487)
|+++|++.+....+|++|||+||+|..||+..+. ....++....+.++.|||+|+.||+. +.+|||||.++|||
T Consensus 758 v~liGv~l~~~~~~i~leyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YLe~---~~fvHRDLAaRNCL 834 (1025)
T KOG1095|consen 758 VSLIGVCLDSGPPLILLEYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYLES---KHFVHRDLAARNCL 834 (1025)
T ss_pred eeEEEeecCCCCcEEEehhcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHHHh---CCCcCcchhhhhee
Confidence 9999999999999999999999999999986422 25678889999999999999999954 45999999999999
Q ss_pred eCCCCCEEEeccCCccccCCCCceeeEeeecccccccCCcccCCCCCCchhHHHHHHHHHHHHHh-CCCCccccCCCCcc
Q 011360 345 LNDDMEACISDLGLAMAIPDGYTRVLISYVLGTMAYIAPEYFQQPELSEKCDIFSFGMLLISLVR-GVPSFVFHQNGEEI 423 (487)
Q Consensus 345 l~~~~~~kl~DFg~s~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DvwslG~~l~ellt-g~~pf~~~~~~~~~ 423 (487)
++....+||+|||+|+.+.............-+.+|||||.+..+.++.|+|||||||++||++| |..||...++
T Consensus 835 L~~~r~VKIaDFGlArDiy~~~yyr~~~~a~lPvkWm~PEsl~d~iFtskSDvWsFGVllWEifslG~~PY~~~~n---- 910 (1025)
T KOG1095|consen 835 LDERRVVKIADFGLARDIYDKDYYRKHGEAMLPVKWMPPESLKDGIFTSKSDVWSFGVLLWEIFSLGATPYPSRSN---- 910 (1025)
T ss_pred ecccCcEEEcccchhHhhhhchheeccCccccceecCCHHHHhhcccccccchhhhHHHHHHHHhCCCCCCCCcch----
Confidence 99999999999999996655444333333345689999999999999999999999999999999 7999954433
Q ss_pred ccHHHHHHHHhcCCCCCccCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCChHHHHHHHhhhC
Q 011360 424 CSPEWLRKVMNSKNPSRAIDPRLPGNGYEKKMLHVLKIAYICTLHDPEERPNSQYVRCRLSQLL 487 (487)
Q Consensus 424 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~~il~~L~~ll 487 (487)
.+.+..+..+++. ..++.+| ..++++|..||+.+|++||++..|++.+..++
T Consensus 911 --~~v~~~~~~ggRL--~~P~~CP--------~~ly~lM~~CW~~~pe~RP~F~~i~~q~~~i~ 962 (1025)
T KOG1095|consen 911 --FEVLLDVLEGGRL--DPPSYCP--------EKLYQLMLQCWKHDPEDRPSFRTIVEQDPAIS 962 (1025)
T ss_pred --HHHHHHHHhCCcc--CCCCCCC--------hHHHHHHHHHccCChhhCccHHHHHhhhhhhh
Confidence 3445556666532 2222333 45889999999999999999999999887653
No 30
>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.9e-42 Score=343.09 Aligned_cols=247 Identities=24% Similarity=0.335 Sum_probs=205.4
Q ss_pred hccccccccccccccceeEEEEEecCCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccC-CCCCcc
Q 011360 190 KEDCFASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQI-RHRNIL 268 (487)
Q Consensus 190 ~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpnIv 268 (487)
..++|.++++||+|.||+|+++..+ .+++.+|||.++. +.......++..+.|..++... +||.++
T Consensus 366 ~l~~F~~l~vLGkGsFGkV~lae~k-~~~e~yAIK~LKK------------~~Il~~d~Ve~~~~EkrI~~la~~HPFL~ 432 (694)
T KOG0694|consen 366 TLDDFRLLAVLGRGSFGKVLLAELK-GTNEYYAIKVLKK------------GDILQRDEVESLMCEKRIFELANRHPFLV 432 (694)
T ss_pred cccceEEEEEeccCcCceEEEEEEc-CCCcEEEEEEeec------------cceeccccHHHHHHHHHHHHHhccCCeEe
Confidence 3457999999999999999999875 5788999998854 3445566777888888887777 699999
Q ss_pred ccceEEecCCeeEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCC
Q 011360 269 PLLAHMVRPDCHLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVLLNDD 348 (487)
Q Consensus 269 ~l~~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nill~~~ 348 (487)
+++.+|.+.+++|+||||+.||++..+.+ ...+++..+..++..++.||.|| |++||||||||.+|||+|.+
T Consensus 433 ~L~~~fQT~~~l~fvmey~~Ggdm~~~~~-----~~~F~e~rarfyaAev~l~L~fL---H~~~IIYRDlKLdNiLLD~e 504 (694)
T KOG0694|consen 433 NLFSCFQTKEHLFFVMEYVAGGDLMHHIH-----TDVFSEPRARFYAAEVVLGLQFL---HENGIIYRDLKLDNLLLDTE 504 (694)
T ss_pred ecccccccCCeEEEEEEecCCCcEEEEEe-----cccccHHHHHHHHHHHHHHHHHH---HhcCceeeecchhheEEccc
Confidence 99999999999999999999999544433 46799999999999999999999 88999999999999999999
Q ss_pred CCEEEeccCCccccCCCCceeeEeeecccccccCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCccccCCCCccccHHH
Q 011360 349 MEACISDLGLAMAIPDGYTRVLISYVLGTMAYIAPEYFQQPELSEKCDIFSFGMLLISLVRGVPSFVFHQNGEEICSPEW 428 (487)
Q Consensus 349 ~~~kl~DFg~s~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DvwslG~~l~elltg~~pf~~~~~~~~~~~~~~ 428 (487)
|++||+|||+++....... .+++++|||.|+|||++.+..|+.++|+|||||+||||+.|..||.+.+. .+.
T Consensus 505 Gh~kiADFGlcKe~m~~g~--~TsTfCGTpey~aPEil~e~~Yt~aVDWW~lGVLlyeML~Gq~PF~gddE------ee~ 576 (694)
T KOG0694|consen 505 GHVKIADFGLCKEGMGQGD--RTSTFCGTPEFLAPEVLTEQSYTRAVDWWGLGVLLYEMLVGESPFPGDDE------EEV 576 (694)
T ss_pred CcEEecccccccccCCCCC--ccccccCChhhcChhhhccCcccchhhHHHHHHHHHHHHcCCCCCCCCCH------HHH
Confidence 9999999999987543333 34789999999999999999999999999999999999999999955433 233
Q ss_pred HHHHHhcCCCCCccCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCCh
Q 011360 429 LRKVMNSKNPSRAIDPRLPGNGYEKKMLHVLKIAYICTLHDPEERPNS 476 (487)
Q Consensus 429 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~ 476 (487)
...+...... .| .-.+.+...++.++|.+||++|..+
T Consensus 577 FdsI~~d~~~-------yP----~~ls~ea~~il~~ll~k~p~kRLG~ 613 (694)
T KOG0694|consen 577 FDSIVNDEVR-------YP----RFLSKEAIAIMRRLLRKNPEKRLGS 613 (694)
T ss_pred HHHHhcCCCC-------CC----CcccHHHHHHHHHHhccCcccccCC
Confidence 4444332211 11 1234678899999999999999865
No 31
>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=2.4e-42 Score=341.13 Aligned_cols=249 Identities=26% Similarity=0.324 Sum_probs=209.5
Q ss_pred ccccccccccccceeEEEEEecCCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCCCCccccce
Q 011360 193 CFASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQIRHRNILPLLA 272 (487)
Q Consensus 193 ~~~~~~~lg~G~~g~v~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~ 272 (487)
-|++.+.||.|+.|.|-+|++ ..+|+..|||++... ..........+.+|+.+|+.+.||||+++|+
T Consensus 13 pwkLgkTLG~Gstg~vrlakh-~~TGqlaaiKii~k~------------~~~s~s~~~~IerEIviMkLi~HpnVl~Lyd 79 (786)
T KOG0588|consen 13 PWKLGKTLGKGSTGCVRLAKH-AETGQLAAIKIIPKR------------SELSSSQPAGIEREIVIMKLIEHPNVLRLYD 79 (786)
T ss_pred ceeccccccCCCCceehhhhc-ccccceeEEEeeccc------------cccccccccchhhhhHHHHHhcCCCeeeeee
Confidence 488889999999999999985 579999999998432 1334445667889999999999999999999
Q ss_pred EEecCCeeEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCCEE
Q 011360 273 HMVRPDCHLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVLLNDDMEAC 352 (487)
Q Consensus 273 ~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nill~~~~~~k 352 (487)
+|.+...+|+|.||++||.|++++-. .+++++..+.+++.||+.|+.|+ |..+|+||||||+|+|++..+++|
T Consensus 80 Vwe~~~~lylvlEyv~gGELFdylv~----kG~l~e~eaa~ff~QIi~gv~yC---H~~~icHRDLKpENlLLd~~~nIK 152 (786)
T KOG0588|consen 80 VWENKQHLYLVLEYVPGGELFDYLVR----KGPLPEREAAHFFRQILDGVSYC---HAFNICHRDLKPENLLLDVKNNIK 152 (786)
T ss_pred eeccCceEEEEEEecCCchhHHHHHh----hCCCCCHHHHHHHHHHHHHHHHH---hhhcceeccCCchhhhhhcccCEe
Confidence 99999999999999999999999965 67899999999999999999999 555699999999999999999999
Q ss_pred EeccCCccccCCCCceeeEeeecccccccCCcccCCCCC-CchhHHHHHHHHHHHHHhCCCCccccCCCCccccHHHHHH
Q 011360 353 ISDLGLAMAIPDGYTRVLISYVLGTMAYIAPEYFQQPEL-SEKCDIFSFGMLLISLVRGVPSFVFHQNGEEICSPEWLRK 431 (487)
Q Consensus 353 l~DFg~s~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~-~~~~DvwslG~~l~elltg~~pf~~~~~~~~~~~~~~~~~ 431 (487)
|+|||+|..-..+. ...+.||+|.|.|||++.+..| +.++||||+||+||.|+||+.||. +.+....+.+
T Consensus 153 IADFGMAsLe~~gk---lLeTSCGSPHYA~PEIV~G~pYdG~~sDVWSCGVILfALLtG~LPFd------DdNir~LLlK 223 (786)
T KOG0588|consen 153 IADFGMASLEVPGK---LLETSCGSPHYAAPEIVSGRPYDGRPSDVWSCGVILFALLTGKLPFD------DDNIRVLLLK 223 (786)
T ss_pred eeccceeecccCCc---cccccCCCcccCCchhhcCCCCCCCccccchhHHHHHHHHhCCCCCC------CccHHHHHHH
Confidence 99999997654433 3357889999999999999988 478999999999999999999993 3334444444
Q ss_pred HHhcCCCCCccCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCChHHHHH
Q 011360 432 VMNSKNPSRAIDPRLPGNGYEKKMLHVLKIAYICTLHDPEERPNSQYVRC 481 (487)
Q Consensus 432 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~~il~ 481 (487)
+..+... +| ..++.++.+|+++|+..||++|.|+++|++
T Consensus 224 V~~G~f~-------MP----s~Is~eaQdLLr~ml~VDp~~RiT~~eI~k 262 (786)
T KOG0588|consen 224 VQRGVFE-------MP----SNISSEAQDLLRRMLDVDPSTRITTEEILK 262 (786)
T ss_pred HHcCccc-------CC----CcCCHHHHHHHHHHhccCccccccHHHHhh
Confidence 4433221 22 223456899999999999999999999986
No 32
>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.8e-43 Score=333.45 Aligned_cols=250 Identities=30% Similarity=0.416 Sum_probs=208.4
Q ss_pred cccccccccccccceeEEEEEecCCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCCCCccccc
Q 011360 192 DCFASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQIRHRNILPLL 271 (487)
Q Consensus 192 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~ 271 (487)
..|..++.||+|.||.||+|. +..+++.||+|++.. .........+.+|+.++.++++|||.++|
T Consensus 13 ~~~~~~~~IgrGsfG~Vyk~~-d~~t~k~vAiKii~L--------------e~~~deIediqqei~~Ls~~~~~~it~yy 77 (467)
T KOG0201|consen 13 LLYTKLELIGRGSFGEVYKAI-DNKTKKVVAIKIIDL--------------EEAEDEIEDIQQEISVLSQCDSPNITEYY 77 (467)
T ss_pred cccccchhccccccceeeeee-eccccceEEEEEech--------------hhcchhhHHHHHHHHHHHhcCcchHHhhh
Confidence 358888999999999999996 567899999999843 23344567788999999999999999999
Q ss_pred eEEecCCeeEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCCE
Q 011360 272 AHMVRPDCHLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVLLNDDMEA 351 (487)
Q Consensus 272 ~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nill~~~~~~ 351 (487)
+.+..+..++++||||.||++.+.+.. +..+.+..+..+++++..||.|| |..+.+|||||+.|||+..+|.+
T Consensus 78 gsyl~g~~LwiiMey~~gGsv~~lL~~----~~~~~E~~i~~ilre~l~~l~yl---H~~~kiHrDIKaanil~s~~g~v 150 (467)
T KOG0201|consen 78 GSYLKGTKLWIIMEYCGGGSVLDLLKS----GNILDEFEIAVILREVLKGLDYL---HSEKKIHRDIKAANILLSESGDV 150 (467)
T ss_pred hheeecccHHHHHHHhcCcchhhhhcc----CCCCccceeeeehHHHHHHhhhh---hhcceecccccccceeEeccCcE
Confidence 999999999999999999999999964 45557888888999999999999 88889999999999999999999
Q ss_pred EEeccCCccccCCCCceeeEeeecccccccCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCccccCCCCccccHHHHHH
Q 011360 352 CISDLGLAMAIPDGYTRVLISYVLGTMAYIAPEYFQQPELSEKCDIFSFGMLLISLVRGVPSFVFHQNGEEICSPEWLRK 431 (487)
Q Consensus 352 kl~DFg~s~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DvwslG~~l~elltg~~pf~~~~~~~~~~~~~~~~~ 431 (487)
||+|||.+..+....... .+++|||.|||||++.+..|+.|+||||||++.+||.+|.+|+....+.+-...
T Consensus 151 kl~DfgVa~ql~~~~~rr--~tfvGTPfwMAPEVI~~~~Y~~KADIWSLGITaiEla~GePP~s~~hPmrvlfl------ 222 (467)
T KOG0201|consen 151 KLADFGVAGQLTNTVKRR--KTFVGTPFWMAPEVIKQSGYDTKADIWSLGITAIELAKGEPPHSKLHPMRVLFL------ 222 (467)
T ss_pred EEEecceeeeeechhhcc--ccccccccccchhhhccccccchhhhhhhhHHHHHHhcCCCCCcccCcceEEEe------
Confidence 999999998876554433 578899999999999988999999999999999999999999954443222110
Q ss_pred HHhcCCCCCccCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCChHHHHH
Q 011360 432 VMNSKNPSRAIDPRLPGNGYEKKMLHVLKIAYICTLHDPEERPNSQYVRC 481 (487)
Q Consensus 432 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~~il~ 481 (487)
..... +|.+.+ ..+.-+.+++..||.+||++|||+.++++
T Consensus 223 --Ipk~~----PP~L~~----~~S~~~kEFV~~CL~k~P~~RpsA~~LLK 262 (467)
T KOG0201|consen 223 --IPKSA----PPRLDG----DFSPPFKEFVEACLDKNPEFRPSAKELLK 262 (467)
T ss_pred --ccCCC----CCcccc----ccCHHHHHHHHHHhhcCcccCcCHHHHhh
Confidence 11111 222222 34455888899999999999999999986
No 33
>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=6.9e-42 Score=299.93 Aligned_cols=251 Identities=25% Similarity=0.354 Sum_probs=209.1
Q ss_pred cccccccccccccceeEEEEEecCCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCCCCccccc
Q 011360 192 DCFASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQIRHRNILPLL 271 (487)
Q Consensus 192 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~ 271 (487)
++|++.+.||.|-||.||+|+.+ .++..||+|++.. ..........++.+|+++-+.|+||||+++|
T Consensus 22 ~dfeigr~LgkgkFG~vYlarek-ks~~IvalKVlfK------------sqi~~~~v~~qlrREiEIqs~L~hpnilrlY 88 (281)
T KOG0580|consen 22 DDFEIGRPLGKGKFGNVYLAREK-KSLFIVALKVLFK------------SQILKTQVEHQLRREIEIQSHLRHPNILRLY 88 (281)
T ss_pred hhccccccccCCccccEeEeeec-cCCcEEEEeeeeH------------HHHHHhcchhhhhheeEeecccCCccHHhhh
Confidence 45999999999999999999864 5788999998832 2233344567889999999999999999999
Q ss_pred eEEecCCeeEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCCE
Q 011360 272 AHMVRPDCHLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVLLNDDMEA 351 (487)
Q Consensus 272 ~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nill~~~~~~ 351 (487)
++|.+...+|+++||..+|+|...|.. .....+++.....++.|+|.||.|+ |.++|+||||||+|+|++..+.+
T Consensus 89 ~~fhd~~riyLilEya~~gel~k~L~~--~~~~~f~e~~~a~Yi~q~A~Al~y~---h~k~VIhRdiKpenlLlg~~~~l 163 (281)
T KOG0580|consen 89 GYFHDSKRIYLILEYAPRGELYKDLQE--GRMKRFDEQRAATYIKQLANALLYC---HLKRVIHRDIKPENLLLGSAGEL 163 (281)
T ss_pred hheeccceeEEEEEecCCchHHHHHHh--cccccccccchhHHHHHHHHHHHHh---ccCCcccCCCCHHHhccCCCCCe
Confidence 999999999999999999999999975 4466788999999999999999999 78889999999999999999999
Q ss_pred EEeccCCccccCCCCceeeEeeecccccccCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCccccCCCCccccHHHHHH
Q 011360 352 CISDLGLAMAIPDGYTRVLISYVLGTMAYIAPEYFQQPELSEKCDIFSFGMLLISLVRGVPSFVFHQNGEEICSPEWLRK 431 (487)
Q Consensus 352 kl~DFg~s~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DvwslG~~l~elltg~~pf~~~~~~~~~~~~~~~~~ 431 (487)
|++|||.+...+.+.. .+.+||..|.+||...+..++..+|+|++|++.||++.|.+||.... ..+...+
T Consensus 164 kiAdfGwsV~~p~~kR----~tlcgt~dyl~pEmv~~~~hd~~Vd~w~lgvl~yeflvg~ppFes~~------~~etYkr 233 (281)
T KOG0580|consen 164 KIADFGWSVHAPSNKR----KTLCGTLDYLPPEMVEGRGHDKFVDLWSLGVLCYEFLVGLPPFESQS------HSETYKR 233 (281)
T ss_pred eccCCCceeecCCCCc----eeeecccccCCHhhcCCCCccchhhHHHHHHHHHHHHhcCCchhhhh------hHHHHHH
Confidence 9999999987654332 56789999999999999999999999999999999999999995443 1122222
Q ss_pred HHhcCCCCCccCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCChHHHHH
Q 011360 432 VMNSKNPSRAIDPRLPGNGYEKKMLHVLKIAYICTLHDPEERPNSQYVRC 481 (487)
Q Consensus 432 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~~il~ 481 (487)
+.... -.++..+ +..+.++|.+|+..+|.+|.+..++++
T Consensus 234 I~k~~---~~~p~~i--------s~~a~dlI~~ll~~~p~~r~~l~~v~~ 272 (281)
T KOG0580|consen 234 IRKVD---LKFPSTI--------SGGAADLISRLLVKNPIERLALTEVMD 272 (281)
T ss_pred HHHcc---ccCCccc--------ChhHHHHHHHHhccCccccccHHHHhh
Confidence 22211 1111223 345889999999999999999999875
No 34
>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=1.1e-41 Score=320.34 Aligned_cols=256 Identities=24% Similarity=0.381 Sum_probs=210.0
Q ss_pred cccccccccccccceeEEEEEecCCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCCCCccccc
Q 011360 192 DCFASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQIRHRNILPLL 271 (487)
Q Consensus 192 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~ 271 (487)
+.|++++.||.|..|+||++..+ .++..+|+|++.. ..........++..|-+||..+.||.+..+|
T Consensus 77 ~~f~llk~LG~GdiG~VyL~~l~-~t~~~fAmKVmdK------------~~l~~rkKl~Ra~tE~eIL~~lDHPFlPTLY 143 (459)
T KOG0610|consen 77 RHFRLLKRLGCGDIGTVYLVELR-GTNCLFAMKVMDK------------ESLASRKKLKRAQTEREILSLLDHPFLPTLY 143 (459)
T ss_pred HHHHHHHHcCCCCceeEEEEEec-CCCceEEEEEecH------------HHHhhhhHHHHHHHHHHHHHhcCCCccchhh
Confidence 45889999999999999999865 4668999998832 2233355677888999999999999999999
Q ss_pred eEEecCCeeEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCCE
Q 011360 272 AHMVRPDCHLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVLLNDDMEA 351 (487)
Q Consensus 272 ~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nill~~~~~~ 351 (487)
..+..++..|++||||+||+|..+++. +.++.+++..++.++..++.||+|| |..|||+|||||+||||.++|++
T Consensus 144 a~fet~~~~cl~meyCpGGdL~~Lrqk--Qp~~~fse~~aRFYaAEvl~ALEYL---HmlGivYRDLKPENILvredGHI 218 (459)
T KOG0610|consen 144 ASFETDKYSCLVMEYCPGGDLHSLRQK--QPGKRFSESAARFYAAEVLLALEYL---HMLGIVYRDLKPENILVREDGHI 218 (459)
T ss_pred heeeccceeEEEEecCCCccHHHHHhh--CCCCccchhhHHHHHHHHHHHHHHH---HhhceeeccCCcceeEEecCCcE
Confidence 999999999999999999999999886 6778899999999999999999999 88999999999999999999999
Q ss_pred EEeccCCccccCCC---------------------------------Cc---------------------eeeEeeeccc
Q 011360 352 CISDLGLAMAIPDG---------------------------------YT---------------------RVLISYVLGT 377 (487)
Q Consensus 352 kl~DFg~s~~~~~~---------------------------------~~---------------------~~~~~~~~gt 377 (487)
-|+||.++...... .. ......++||
T Consensus 219 MLsDFDLS~~~~~~Pt~~~s~~~~~~~~~~~~~~~~~s~f~~r~~~~~~~~~k~~~~~~~~~p~~~aep~~~RSnSFVGT 298 (459)
T KOG0610|consen 219 MLSDFDLSLRCPVSPTLVKSSSPRSSGSQPSCRSRQPSCFSPRCLSSSKKRKKKDESASRSLPELVAEPTGARSNSFVGT 298 (459)
T ss_pred EeeeccccccCCCCCeeeccCCCCCCCCCcccccccccccccchhccccccccccccccccchhhhcCCCCccccccccc
Confidence 99999988543110 00 0011235789
Q ss_pred ccccCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCccccCCCCccccHHHHHHHHhcCCCCCccCCCCCCCCcHHHHHH
Q 011360 378 MAYIAPEYFQQPELSEKCDIFSFGMLLISLVRGVPSFVFHQNGEEICSPEWLRKVMNSKNPSRAIDPRLPGNGYEKKMLH 457 (487)
Q Consensus 378 ~~y~aPE~l~~~~~~~~~DvwslG~~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 457 (487)
-.|+|||++.+...+.++|+|+|||++|||+.|..||.+.++... +..++.. +..+|+. ...+..
T Consensus 299 hEYlAPEvI~G~GHgsAVDWWtfGIflYEmLyG~TPFKG~~~~~T------l~NIv~~-------~l~Fp~~--~~vs~~ 363 (459)
T KOG0610|consen 299 HEYLAPEVIRGEGHGSAVDWWTFGIFLYEMLYGTTPFKGSNNKET------LRNIVGQ-------PLKFPEE--PEVSSA 363 (459)
T ss_pred cccccceeeecCCCCchhhHHHHHHHHHHHHhCCCCcCCCCchhh------HHHHhcC-------CCcCCCC--CcchhH
Confidence 999999999999999999999999999999999999987766432 2222221 1123322 255677
Q ss_pred HHHHHhhccCCCCCCCCC----hHHHH
Q 011360 458 VLKIAYICTLHDPEERPN----SQYVR 480 (487)
Q Consensus 458 l~~li~~cl~~~P~~RPs----~~~il 480 (487)
+.+||+++|.+||++|.. +.+|.
T Consensus 364 akDLIr~LLvKdP~kRlg~~rGA~eIK 390 (459)
T KOG0610|consen 364 AKDLIRKLLVKDPSKRLGSKRGAAEIK 390 (459)
T ss_pred HHHHHHHHhccChhhhhccccchHHhh
Confidence 999999999999999998 66664
No 35
>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k
Probab=100.00 E-value=3e-41 Score=329.30 Aligned_cols=266 Identities=21% Similarity=0.307 Sum_probs=202.1
Q ss_pred cccccccccccccceeEEEEEecC---------------CCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHH
Q 011360 192 DCFASLEKIGSGGCGEVYKAELPG---------------SNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEI 256 (487)
Q Consensus 192 ~~~~~~~~lg~G~~g~v~~~~~~~---------------~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~ 256 (487)
++|.+.+.||+|+||.||+|.++. .++..||+|.+... ........+.+|+
T Consensus 5 ~~~~~~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~--------------~~~~~~~~~~~E~ 70 (304)
T cd05096 5 GHLLFKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPD--------------ANKNARNDFLKEV 70 (304)
T ss_pred hhCeeeeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCC--------------CCHHHHHHHHHHH
Confidence 468999999999999999997532 23457999987421 1223455788999
Q ss_pred HHhccCCCCCccccceEEecCCeeEEEEEecCCCCHHHHHhhhhc---------------CCCCCChHHHHHHHHHHHHH
Q 011360 257 ITASQIRHRNILPLLAHMVRPDCHLLVYEFMKNGSLQDILDDVSR---------------GRRELDWPSRHRIALGVASG 321 (487)
Q Consensus 257 ~~l~~l~hpnIv~l~~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~---------------~~~~l~~~~~~~i~~qi~~~ 321 (487)
.++..++||||+++++++...+..++||||+++|+|.+++..... ....+++..+..++.|++.|
T Consensus 71 ~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~a 150 (304)
T cd05096 71 KILSRLKDPNIIRLLGVCVDEDPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASG 150 (304)
T ss_pred HHHhhcCCCCeeEEEEEEecCCceEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999864211 12346788899999999999
Q ss_pred HHHHHhcCCCCeeecCCCCCCEEeCCCCCEEEeccCCccccCCCCceeeEeeecccccccCCcccCCCCCCchhHHHHHH
Q 011360 322 LEYLHMYHSASIIHGDIKPRNVLLNDDMEACISDLGLAMAIPDGYTRVLISYVLGTMAYIAPEYFQQPELSEKCDIFSFG 401 (487)
Q Consensus 322 L~~Lh~~h~~givH~Dlkp~Nill~~~~~~kl~DFg~s~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DvwslG 401 (487)
|.|| |+.||+||||||+|||++.++.+||+|||++................++..|+|||++.+..++.++||||||
T Consensus 151 l~~l---H~~~ivH~dlkp~Nill~~~~~~kl~DfG~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG 227 (304)
T cd05096 151 MKYL---SSLNFVHRDLATRNCLVGENLTIKIADFGMSRNLYAGDYYRIQGRAVLPIRWMAWECILMGKFTTASDVWAFG 227 (304)
T ss_pred HHHH---HHCCccccCcchhheEEcCCccEEECCCccceecccCceeEecCcCCCCccccCHHHHhcCCCCchhhhHHHH
Confidence 9999 6778999999999999999999999999999866444332222334567899999999888899999999999
Q ss_pred HHHHHHHhC--CCCccccCCCCccccHHHHHHHHhcCCCC--CccCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCChH
Q 011360 402 MLLISLVRG--VPSFVFHQNGEEICSPEWLRKVMNSKNPS--RAIDPRLPGNGYEKKMLHVLKIAYICTLHDPEERPNSQ 477 (487)
Q Consensus 402 ~~l~elltg--~~pf~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~ 477 (487)
+++|+|+++ ..||....... ..+............ ...++. .+..+.+++.+||+.+|++|||+.
T Consensus 228 ~~l~el~~~~~~~p~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~li~~cl~~~p~~RPs~~ 296 (304)
T cd05096 228 VTLWEILMLCKEQPYGELTDEQ---VIENAGEFFRDQGRQVYLFRPPP--------CPQGLYELMLQCWSRDCRERPSFS 296 (304)
T ss_pred HHHHHHHHccCCCCCCcCCHHH---HHHHHHHHhhhccccccccCCCC--------CCHHHHHHHHHHccCCchhCcCHH
Confidence 999999974 56774332211 111111111111110 001111 224689999999999999999999
Q ss_pred HHHHHHhh
Q 011360 478 YVRCRLSQ 485 (487)
Q Consensus 478 ~il~~L~~ 485 (487)
+|.+.|++
T Consensus 297 ~i~~~l~~ 304 (304)
T cd05096 297 DIHAFLTE 304 (304)
T ss_pred HHHHHHhC
Confidence 99998864
No 36
>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit. Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce
Probab=100.00 E-value=1.4e-41 Score=341.01 Aligned_cols=265 Identities=23% Similarity=0.287 Sum_probs=205.1
Q ss_pred ccccccccccccccceeEEEEEe----cCCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccC-CCC
Q 011360 191 EDCFASLEKIGSGGCGEVYKAEL----PGSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQI-RHR 265 (487)
Q Consensus 191 ~~~~~~~~~lg~G~~g~v~~~~~----~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~hp 265 (487)
.++|.+.+.||+|+||.||+|++ ...++..||+|++... ........+.+|+.++..+ +||
T Consensus 34 ~~~~~~~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~--------------~~~~~~~~~~~Ei~il~~l~~Hp 99 (375)
T cd05104 34 RNRLSFGKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPS--------------AHLTEREALMSELKVLSYLGNHI 99 (375)
T ss_pred hHHeehhheecCCccceEEEEEEeccccCccceeEEEEeccCC--------------cCcHHHHHHHHHHHHHHHhcCCc
Confidence 44699999999999999999974 2345678999987321 1122345678899999999 899
Q ss_pred CccccceEEecCCeeEEEEEecCCCCHHHHHhhhhc--------------------------------------------
Q 011360 266 NILPLLAHMVRPDCHLLVYEFMKNGSLQDILDDVSR-------------------------------------------- 301 (487)
Q Consensus 266 nIv~l~~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~-------------------------------------------- 301 (487)
||+++++++...+..++|||||++|+|.+++.....
T Consensus 100 nIv~l~~~~~~~~~~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 179 (375)
T cd05104 100 NIVNLLGACTVGGPTLVITEYCCYGDLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQREMSCDSLNEYMDMKPGVSYVV 179 (375)
T ss_pred ceeeeeeeeccCCcceeeehhccCCcHHHHHHhcccccccccccchhhhHHHHhhhhhhcccchhhhhhhhcCCCccccc
Confidence 999999999999999999999999999999864210
Q ss_pred ---------------------------CCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCCEEEe
Q 011360 302 ---------------------------GRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVLLNDDMEACIS 354 (487)
Q Consensus 302 ---------------------------~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nill~~~~~~kl~ 354 (487)
....+++..+..++.|++.||.|| |++||+||||||+|||++.++.+||+
T Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~l---H~~~ivH~Dlkp~Nill~~~~~~kl~ 256 (375)
T cd05104 180 PTKADKRRSVRSGSYIDQDVTSEILEEDELALDTEDLLSFSYQVAKGMSFL---ASKNCIHRDLAARNILLTHGRITKIC 256 (375)
T ss_pred ccccccccccccceecccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHH---HHCCeeccCCchhhEEEECCCcEEEe
Confidence 112578888999999999999999 67789999999999999999999999
Q ss_pred ccCCccccCCCCceeeEeeecccccccCCcccCCCCCCchhHHHHHHHHHHHHHh-CCCCccccCCCCccccHHHHHHHH
Q 011360 355 DLGLAMAIPDGYTRVLISYVLGTMAYIAPEYFQQPELSEKCDIFSFGMLLISLVR-GVPSFVFHQNGEEICSPEWLRKVM 433 (487)
Q Consensus 355 DFg~s~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DvwslG~~l~ellt-g~~pf~~~~~~~~~~~~~~~~~~~ 433 (487)
|||++................++..|+|||++.+..++.++||||||+++|||++ |..||...... .......
T Consensus 257 DfG~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDi~slG~~l~ellt~g~~p~~~~~~~------~~~~~~~ 330 (375)
T cd05104 257 DFGLARDIRNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSSPYPGMPVD------SKFYKMI 330 (375)
T ss_pred cCccceeccCcccccccCCCCCCcceeChhHhcCCCCCCCCCHHHHHHHHHHHHhcCCCCCCCCCch------HHHHHHH
Confidence 9999986644332222222345678999999999999999999999999999998 88898443221 1122222
Q ss_pred hcCCCCCccCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCChHHHHHHHhhhC
Q 011360 434 NSKNPSRAIDPRLPGNGYEKKMLHVLKIAYICTLHDPEERPNSQYVRCRLSQLL 487 (487)
Q Consensus 434 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~~il~~L~~ll 487 (487)
...... . .+. ..+.++.+++.+||+.||++|||+.+|++.|++.+
T Consensus 331 ~~~~~~-~----~~~----~~~~~l~~li~~cl~~dP~~RPs~~eil~~l~~~~ 375 (375)
T cd05104 331 KEGYRM-L----SPE----CAPSEMYDIMKSCWDADPLKRPTFKQIVQLIEQQL 375 (375)
T ss_pred HhCccC-C----CCC----CCCHHHHHHHHHHccCChhHCcCHHHHHHHHHhhC
Confidence 222111 0 111 11246889999999999999999999999999764
No 37
>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti
Probab=100.00 E-value=1.3e-41 Score=340.82 Aligned_cols=265 Identities=25% Similarity=0.332 Sum_probs=205.5
Q ss_pred ccccccccccccccceeEEEEEec----CCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccC-CCC
Q 011360 191 EDCFASLEKIGSGGCGEVYKAELP----GSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQI-RHR 265 (487)
Q Consensus 191 ~~~~~~~~~lg~G~~g~v~~~~~~----~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~hp 265 (487)
.++|.+.+.||+|+||.||+|.+. ..++..||+|.+... ........+.+|+.+++.+ +||
T Consensus 37 ~~~~~~~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~--------------~~~~~~~~~~~E~~il~~l~~h~ 102 (374)
T cd05106 37 RDNLQFGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKAS--------------AHTDEREALMSELKILSHLGQHK 102 (374)
T ss_pred HHHceehheecCCCcccEEEEEEecCCcccccceeEEEeccCC--------------CCHHHHHHHHHHHHHHHhhccCC
Confidence 446999999999999999999752 234468999987321 1222345678899999999 899
Q ss_pred CccccceEEecCCeeEEEEEecCCCCHHHHHhhhhc--------------------------------------------
Q 011360 266 NILPLLAHMVRPDCHLLVYEFMKNGSLQDILDDVSR-------------------------------------------- 301 (487)
Q Consensus 266 nIv~l~~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~-------------------------------------------- 301 (487)
||+++++++...+..++|||||++|+|.+++.....
T Consensus 103 nIv~~~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (374)
T cd05106 103 NIVNLLGACTHGGPVLVITEYCCYGDLLNFLRKKAETFLNFVMALPEISETSSDYKNITLEKKYIRSDSGFSSQGSDTYV 182 (374)
T ss_pred ceeeEeeEecCCCCeEEeHhhccCCcHHHHHHhhhhhhccccccccccccccccccccchhccccccccccccccccccc
Confidence 999999999999999999999999999999864210
Q ss_pred ----------------------CCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCCEEEeccCCc
Q 011360 302 ----------------------GRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVLLNDDMEACISDLGLA 359 (487)
Q Consensus 302 ----------------------~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nill~~~~~~kl~DFg~s 359 (487)
....+++..+.+++.|++.||.|| |++||+||||||+||++++++.+||+|||++
T Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~yL---H~~giiHrDLkp~Nil~~~~~~~kL~DfGla 259 (374)
T cd05106 183 EMRPVSSSSSQSSDSKDEEDTEDSWPLDLDDLLRFSSQVAQGMDFL---ASKNCIHRDVAARNVLLTDGRVAKICDFGLA 259 (374)
T ss_pred ccCCccccccccccccchhccCCCCCcCHHHHHHHHHHHHHHHHHH---HHCCEEeccCchheEEEeCCCeEEEeeceee
Confidence 113478888999999999999999 7789999999999999999999999999999
Q ss_pred cccCCCCceeeEeeecccccccCCcccCCCCCCchhHHHHHHHHHHHHHh-CCCCccccCCCCccccHHHHHHHHhcCCC
Q 011360 360 MAIPDGYTRVLISYVLGTMAYIAPEYFQQPELSEKCDIFSFGMLLISLVR-GVPSFVFHQNGEEICSPEWLRKVMNSKNP 438 (487)
Q Consensus 360 ~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DvwslG~~l~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 438 (487)
+...............+++.|+|||++.+..++.++|||||||++|+|++ |..||...... ............
T Consensus 260 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt~G~~Pf~~~~~~------~~~~~~~~~~~~ 333 (374)
T cd05106 260 RDIMNDSNYVVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGKSPYPGILVN------SKFYKMVKRGYQ 333 (374)
T ss_pred eeccCCcceeeccCCCCccceeCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCcccccc------HHHHHHHHcccC
Confidence 76644332222223345678999999998899999999999999999997 99999543221 111222222111
Q ss_pred CCccCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCChHHHHHHHhhhC
Q 011360 439 SRAIDPRLPGNGYEKKMLHVLKIAYICTLHDPEERPNSQYVRCRLSQLL 487 (487)
Q Consensus 439 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~~il~~L~~ll 487 (487)
.. .+.. .+.++.+++.+||+.+|++|||+.+|++.|++++
T Consensus 334 -~~----~~~~----~~~~l~~li~~cl~~dp~~RPs~~~l~~~l~~~~ 373 (374)
T cd05106 334 -MS----RPDF----APPEIYSIMKMCWNLEPTERPTFSQISQLIQRQL 373 (374)
T ss_pred -cc----CCCC----CCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHh
Confidence 11 1111 1256889999999999999999999999999874
No 38
>PHA02988 hypothetical protein; Provisional
Probab=100.00 E-value=3e-41 Score=325.75 Aligned_cols=248 Identities=21% Similarity=0.296 Sum_probs=197.2
Q ss_pred cccccccceeEEEEEecCCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCCCCccccceEEec-
Q 011360 198 EKIGSGGCGEVYKAELPGSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQIRHRNILPLLAHMVR- 276 (487)
Q Consensus 198 ~~lg~G~~g~v~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~- 276 (487)
..+|+|++|.||+|.+ +|+.||||.+.... .......+.+.+|+.++.+++||||+++++++.+
T Consensus 26 ~~i~~g~~~~v~~~~~---~~~~vavK~~~~~~------------~~~~~~~~~~~~E~~~l~~l~h~nIv~~~g~~~~~ 90 (283)
T PHA02988 26 VLIKENDQNSIYKGIF---NNKEVIIRTFKKFH------------KGHKVLIDITENEIKNLRRIDSNNILKIYGFIIDI 90 (283)
T ss_pred eEEeeCCceEEEEEEE---CCEEEEEEeccccc------------cccHHHHHHHHHHHHHHHhcCCCCEEEEeeeEEec
Confidence 5789999999999987 68899999884311 1122235678899999999999999999999876
Q ss_pred ---CCeeEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCCEEE
Q 011360 277 ---PDCHLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVLLNDDMEACI 353 (487)
Q Consensus 277 ---~~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nill~~~~~~kl 353 (487)
....++||||+++|+|.+++.. ...+++.....++.|++.||.|||. ..+++||||||+||+++.++.+||
T Consensus 91 ~~~~~~~~lv~Ey~~~g~L~~~l~~----~~~~~~~~~~~i~~~i~~~l~~lH~--~~~~~Hrdlkp~nill~~~~~~kl 164 (283)
T PHA02988 91 VDDLPRLSLILEYCTRGYLREVLDK----EKDLSFKTKLDMAIDCCKGLYNLYK--YTNKPYKNLTSVSFLVTENYKLKI 164 (283)
T ss_pred ccCCCceEEEEEeCCCCcHHHHHhh----CCCCChhHHHHHHHHHHHHHHHHHh--cCCCCCCcCChhhEEECCCCcEEE
Confidence 3567899999999999999964 4568899999999999999999952 247899999999999999999999
Q ss_pred eccCCccccCCCCceeeEeeecccccccCCcccCC--CCCCchhHHHHHHHHHHHHHhCCCCccccCCCCccccHHHHHH
Q 011360 354 SDLGLAMAIPDGYTRVLISYVLGTMAYIAPEYFQQ--PELSEKCDIFSFGMLLISLVRGVPSFVFHQNGEEICSPEWLRK 431 (487)
Q Consensus 354 ~DFg~s~~~~~~~~~~~~~~~~gt~~y~aPE~l~~--~~~~~~~DvwslG~~l~elltg~~pf~~~~~~~~~~~~~~~~~ 431 (487)
+|||++....... ....|++.|+|||++.+ ..++.++|||||||++|||++|..||.... ..+....
T Consensus 165 ~dfg~~~~~~~~~-----~~~~~~~~y~aPE~~~~~~~~~~~k~Di~SlGvil~el~~g~~Pf~~~~------~~~~~~~ 233 (283)
T PHA02988 165 ICHGLEKILSSPP-----FKNVNFMVYFSYKMLNDIFSEYTIKDDIYSLGVVLWEIFTGKIPFENLT------TKEIYDL 233 (283)
T ss_pred cccchHhhhcccc-----ccccCcccccCHHHhhhccccccchhhhhHHHHHHHHHHHCCCCCCCCC------HHHHHHH
Confidence 9999987654322 12457899999999976 689999999999999999999999994332 2223333
Q ss_pred HHhcCCCCCccCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCChHHHHHHHhhh
Q 011360 432 VMNSKNPSRAIDPRLPGNGYEKKMLHVLKIAYICTLHDPEERPNSQYVRCRLSQL 486 (487)
Q Consensus 432 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~~il~~L~~l 486 (487)
..... ....++.. .+..+.+++.+||+.||++|||+.++++.|+.+
T Consensus 234 i~~~~-~~~~~~~~--------~~~~l~~li~~cl~~dp~~Rps~~ell~~l~~~ 279 (283)
T PHA02988 234 IINKN-NSLKLPLD--------CPLEIKCIVEACTSHDSIKRPNIKEILYNLSLY 279 (283)
T ss_pred HHhcC-CCCCCCCc--------CcHHHHHHHHHHhcCCcccCcCHHHHHHHHHHH
Confidence 32222 11111211 234688999999999999999999999999864
No 39
>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]
Probab=100.00 E-value=4.1e-42 Score=302.64 Aligned_cols=265 Identities=25% Similarity=0.337 Sum_probs=210.8
Q ss_pred hccccccccccccccceeEEEEEecCCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCCCCccc
Q 011360 190 KEDCFASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQIRHRNILP 269 (487)
Q Consensus 190 ~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~ 269 (487)
..++|.+.+.||+|||+.||+++ ...++..||+|++.+ ......+..++|++..++++|||+++
T Consensus 19 n~~Ryri~~~LgeGGfsfv~LV~-~~s~~~~YAlKkI~c---------------~~~~~~e~~~rEid~~rkf~s~~vl~ 82 (302)
T KOG2345|consen 19 NNKRYRIQRLLGEGGFSFVDLVK-GLSTGHLYALKKILC---------------HSQEDIEEALREIDNHRKFNSPNVLR 82 (302)
T ss_pred cCceEEEeeeecCCCceeeeeec-ccCcccchhhheeec---------------cchHHHHHHHHHHHHHHhhCCcchHH
Confidence 35689999999999999999997 457899999999854 22346677899999999999999999
Q ss_pred cceEEecC-----CeeEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCC--eeecCCCCCC
Q 011360 270 LLAHMVRP-----DCHLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSAS--IIHGDIKPRN 342 (487)
Q Consensus 270 l~~~~~~~-----~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~g--ivH~Dlkp~N 342 (487)
++++...+ ...|++++|...|+|.+.+......+..+++.+++.++.++++||++| |+.. +.||||||.|
T Consensus 83 l~dh~l~~~~D~~~~~yll~Pyy~~Gsl~d~i~~~k~kg~~~sE~~iL~if~gic~gL~~l---H~~~~~yAH~DiKP~N 159 (302)
T KOG2345|consen 83 LVDHQLREEKDGKHEAYLLLPYYKRGSLLDEIERLKIKGNFVSEAQILWIFLGICRGLEAL---HEKEPPYAHRDIKPAN 159 (302)
T ss_pred HHHHHHHhhccCceeEEEEeehhccccHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHH---hccCCcccccCCCcce
Confidence 99876543 458999999999999999998878888999999999999999999999 6656 9999999999
Q ss_pred EEeCCCCCEEEeccCCccccCCCCcee-------eEeeecccccccCCcccC---CCCCCchhHHHHHHHHHHHHHhCCC
Q 011360 343 VLLNDDMEACISDLGLAMAIPDGYTRV-------LISYVLGTMAYIAPEYFQ---QPELSEKCDIFSFGMLLISLVRGVP 412 (487)
Q Consensus 343 ill~~~~~~kl~DFg~s~~~~~~~~~~-------~~~~~~gt~~y~aPE~l~---~~~~~~~~DvwslG~~l~elltg~~ 412 (487)
||+++++.++|.|||.++..+-.-... .......|..|.|||.+. +...+.++|||||||++|+|+.|..
T Consensus 160 ILls~~~~~vl~D~GS~~~a~i~i~~~~~a~~lQe~a~e~Ct~pyRAPELf~vk~~~ti~ertDIWSLGCtLYa~mf~~s 239 (302)
T KOG2345|consen 160 ILLSDSGLPVLMDLGSATQAPIQIEGSRQALRLQEWAEERCTIPYRAPELFNVKSHCTITERTDIWSLGCTLYAMMFGES 239 (302)
T ss_pred eEecCCCceEEEeccCccccceEeechHHHHHHHHHHHHhCCCcccCchheecccCcccccccchhhhhHHHHHHHHcCC
Confidence 999999999999999987654221110 011234789999999886 4567899999999999999999999
Q ss_pred CccccCCCCccccHHHHHHHHhcCCCCCcc-CCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCChHHHHHHHhhhC
Q 011360 413 SFVFHQNGEEICSPEWLRKVMNSKNPSRAI-DPRLPGNGYEKKMLHVLKIAYICTLHDPEERPNSQYVRCRLSQLL 487 (487)
Q Consensus 413 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~~il~~L~~ll 487 (487)
||..--.. ++...-.+ ...+.-.....+++.+.+++.+|+++||.+||++.+++..++.++
T Consensus 240 Pfe~~~~~--------------GgSlaLAv~n~q~s~P~~~~yse~l~~lik~mlqvdP~qRP~i~~ll~~~d~Li 301 (302)
T KOG2345|consen 240 PFERIYQQ--------------GGSLALAVQNAQISIPNSSRYSEALHQLIKSMLQVDPNQRPTIPELLSKLDDLI 301 (302)
T ss_pred cchHHhhc--------------CCeEEEeeeccccccCCCCCccHHHHHHHHHHhcCCcccCCCHHHHHHHHHhhc
Confidence 99422111 11100000 011111122236678999999999999999999999999998864
No 40
>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]
Probab=100.00 E-value=4.5e-42 Score=314.27 Aligned_cols=261 Identities=23% Similarity=0.315 Sum_probs=203.1
Q ss_pred cccccccccccccceeEEEEEecCCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCCCCccccc
Q 011360 192 DCFASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQIRHRNILPLL 271 (487)
Q Consensus 192 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~ 271 (487)
+.|++++.|++|+||.||+|+ +..+++.||+|+++... .+...--..++|+.++.+.+|||||.+.
T Consensus 76 ~efe~lnrI~EGtyGiVYRak-dk~t~eIVALKr~kmek-------------ek~GFPItsLREIniLl~~~H~NIV~vk 141 (419)
T KOG0663|consen 76 EEFEKLNRIEEGTYGVVYRAK-DKKTDEIVALKRLKMEK-------------EKEGFPITSLREINILLKARHPNIVEVK 141 (419)
T ss_pred HHHHHHhhcccCcceeEEEec-cCCcceeEEeeeccccc-------------ccCCCcchhHHHHHHHHhcCCCCeeeeE
Confidence 469999999999999999997 56799999999995421 1222233457899999999999999999
Q ss_pred eEEecC--CeeEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCC
Q 011360 272 AHMVRP--DCHLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVLLNDDM 349 (487)
Q Consensus 272 ~~~~~~--~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nill~~~~ 349 (487)
.+.... +.+|||||||+. +|.++++.. ..++...+++.++.|++.|++|| |.+.|+||||||+|+|++..|
T Consensus 142 EVVvG~~~d~iy~VMe~~Eh-DLksl~d~m---~q~F~~~evK~L~~QlL~glk~l---H~~wilHRDLK~SNLLm~~~G 214 (419)
T KOG0663|consen 142 EVVVGSNMDKIYIVMEYVEH-DLKSLMETM---KQPFLPGEVKTLMLQLLRGLKHL---HDNWILHRDLKTSNLLLSHKG 214 (419)
T ss_pred EEEeccccceeeeeHHHHHh-hHHHHHHhc---cCCCchHHHHHHHHHHHHHHHHH---hhceeEecccchhheeeccCC
Confidence 988753 679999999976 899999863 46899999999999999999999 788899999999999999999
Q ss_pred CEEEeccCCccccCCCCceeeEeeecccccccCCcccCCC-CCCchhHHHHHHHHHHHHHhCCCCccccCCCCccccHHH
Q 011360 350 EACISDLGLAMAIPDGYTRVLISYVLGTMAYIAPEYFQQP-ELSEKCDIFSFGMLLISLVRGVPSFVFHQNGEEICSPEW 428 (487)
Q Consensus 350 ~~kl~DFg~s~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~-~~~~~~DvwslG~~l~elltg~~pf~~~~~~~~~~~~~~ 428 (487)
.+||+|||+|+.++..... .+..+.|.+|.|||.+.+. .|+.++|+||+||++.||+++++.|.+.+.-. .
T Consensus 215 ~lKiaDFGLAR~ygsp~k~--~T~lVVTLWYRaPELLLG~~tyst~iDMWSvGCI~aE~l~~kPlf~G~sE~d------Q 286 (419)
T KOG0663|consen 215 ILKIADFGLAREYGSPLKP--YTPLVVTLWYRAPELLLGAKTYSTAVDMWSVGCIFAELLTQKPLFPGKSEID------Q 286 (419)
T ss_pred cEEecccchhhhhcCCccc--CcceEEEeeecCHHHhcCCcccCcchhhhhHHHHHHHHHhcCCCCCCCchHH------H
Confidence 9999999999988765332 2456689999999988765 79999999999999999999999996554211 1
Q ss_pred HHHHHh-cCCCCCccCCCCCC-----------CCc-------HH--HHHHHHHHHhhccCCCCCCCCChHHHHH
Q 011360 429 LRKVMN-SKNPSRAIDPRLPG-----------NGY-------EK--KMLHVLKIAYICTLHDPEERPNSQYVRC 481 (487)
Q Consensus 429 ~~~~~~-~~~~~~~~~~~~~~-----------~~~-------~~--~~~~l~~li~~cl~~~P~~RPs~~~il~ 481 (487)
+.+++. -+.|.+.+-|.+.. ..+ .. .+..-++++..+|..||.+|.|+++.++
T Consensus 287 l~~If~llGtPte~iwpg~~~lp~~k~~~f~~~pyn~lr~kF~~~~lse~g~~Lln~llt~dP~kR~tA~~~L~ 360 (419)
T KOG0663|consen 287 LDKIFKLLGTPSEAIWPGYSELPAVKKMTFSEHPYNNLRKKFGALSLSEQGFDLLNKLLTYDPGKRITAEDGLK 360 (419)
T ss_pred HHHHHHHhCCCccccCCCccccchhhccccCCCCchhhhhhccccccchhHHHHHHHHhccCccccccHHHhhc
Confidence 111111 12222222111110 000 01 2356778999999999999999999764
No 41
>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=4.1e-42 Score=333.86 Aligned_cols=254 Identities=23% Similarity=0.337 Sum_probs=214.4
Q ss_pred cccccccccccccceeEEEEEecCCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCCCCccccc
Q 011360 192 DCFASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQIRHRNILPLL 271 (487)
Q Consensus 192 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~ 271 (487)
++|..++.+|.|+||.+++.+++ .++..+++|++..... .....+...+|+.+++++.|||||.++
T Consensus 4 ~~Ye~~~~iG~GafG~a~lvrhk-~~~~~~vlK~I~l~~~-------------t~~~r~~A~~E~~lis~~~hP~iv~y~ 69 (426)
T KOG0589|consen 4 DNYEVLRQVGRGAFGSALLVRHK-SDDKLYVLKKINLEKL-------------TEPERRSAIQEMDLLSKLLHPNIVEYK 69 (426)
T ss_pred chhhhhhhcCccccchhhhhhhc-cCCceEEEEEEecccc-------------CchhhHHHHHHHHHHHhccCCCeeeec
Confidence 46999999999999999999754 5677999999965322 222344778999999999999999999
Q ss_pred eEEecCCe-eEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCC
Q 011360 272 AHMVRPDC-HLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVLLNDDME 350 (487)
Q Consensus 272 ~~~~~~~~-~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nill~~~~~ 350 (487)
+.|..++. ++|||+||+||+|.+.+... .+..+++..+..++.|++.|+.|| |++.|+|||||+.||+++.++.
T Consensus 70 ds~~~~~~~l~Ivm~Y~eGg~l~~~i~~~--k~~~f~E~~i~~~~~Q~~~av~yl---H~~~iLHRDlK~~Nifltk~~~ 144 (426)
T KOG0589|consen 70 DSFEEDGQLLCIVMEYCEGGDLAQLIKEQ--KGVLFPEERILKWFVQILLAVNYL---HENRVLHRDLKCANIFLTKDKK 144 (426)
T ss_pred cchhcCCceEEEEEeecCCCCHHHHHHHH--hhccccHHHHHHHHHHHHHHHHHH---HhhhhhcccchhhhhhccccCc
Confidence 99999888 89999999999999999873 367899999999999999999999 5666999999999999999999
Q ss_pred EEEeccCCccccCCCCceeeEeeecccccccCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCccccCCCCccccHHHHH
Q 011360 351 ACISDLGLAMAIPDGYTRVLISYVLGTMAYIAPEYFQQPELSEKCDIFSFGMLLISLVRGVPSFVFHQNGEEICSPEWLR 430 (487)
Q Consensus 351 ~kl~DFg~s~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DvwslG~~l~elltg~~pf~~~~~~~~~~~~~~~~ 430 (487)
|||+|||+|+.+..... ......||+.|+.||.+.+.+|+.|+|||||||++|||++-+++|... +..+...
T Consensus 145 VkLgDfGlaK~l~~~~~--~a~tvvGTp~YmcPEil~d~pYn~KSDiWsLGC~~yEm~~lk~aF~a~------~m~~Li~ 216 (426)
T KOG0589|consen 145 VKLGDFGLAKILNPEDS--LASTVVGTPYYMCPEILSDIPYNEKSDIWSLGCCLYEMCTLKPAFKAS------NMSELIL 216 (426)
T ss_pred eeecchhhhhhcCCchh--hhheecCCCcccCHHHhCCCCCCccCcchhhcchHHHHHhcccccCcc------chHHHHH
Confidence 99999999999876642 235678999999999999999999999999999999999999999433 3344555
Q ss_pred HHHhcCCCCCccCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCChHHHHHH
Q 011360 431 KVMNSKNPSRAIDPRLPGNGYEKKMLHVLKIAYICTLHDPEERPNSQYVRCR 482 (487)
Q Consensus 431 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~~il~~ 482 (487)
++..... ..+|+ .++.++..++..|+..+|..||++.+++..
T Consensus 217 ki~~~~~------~Plp~----~ys~el~~lv~~~l~~~P~~RPsa~~LL~~ 258 (426)
T KOG0589|consen 217 KINRGLY------SPLPS----MYSSELRSLVKSMLRKNPEHRPSALELLRR 258 (426)
T ss_pred HHhhccC------CCCCc----cccHHHHHHHHHHhhcCCccCCCHHHHhhC
Confidence 5554331 11333 345679999999999999999999999864
No 42
>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2. Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst
Probab=100.00 E-value=1.3e-40 Score=328.70 Aligned_cols=201 Identities=25% Similarity=0.422 Sum_probs=173.7
Q ss_pred ccccccccccccccceeEEEEEecCCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCCCCcccc
Q 011360 191 EDCFASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQIRHRNILPL 270 (487)
Q Consensus 191 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l 270 (487)
.++|++.+.||.|+||.||+++. ..++..+|+|.+.. .........+.+|+.++++++||||+++
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~~~~a~k~~~~--------------~~~~~~~~~~~~E~~~l~~l~h~~iv~~ 68 (331)
T cd06649 4 DDDFERISELGAGNGGVVTKVQH-KPSGLIMARKLIHL--------------EIKPAIRNQIIRELQVLHECNSPYIVGF 68 (331)
T ss_pred cccceEEEeecCCCCEEEEEEEE-CCCCcEEEEEEeec--------------ccCHHHHHHHHHHHHHHHHCCCCCCCeE
Confidence 45799999999999999999975 46788999998743 1122345678899999999999999999
Q ss_pred ceEEecCCeeEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCC
Q 011360 271 LAHMVRPDCHLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVLLNDDME 350 (487)
Q Consensus 271 ~~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nill~~~~~ 350 (487)
++++..++..++||||+++|+|.+++.. ...+++..+..++.|++.||.|||+ ..+|+||||||+||+++.++.
T Consensus 69 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~----~~~~~~~~~~~~~~~i~~~l~~lH~--~~~ivH~dlkp~Nil~~~~~~ 142 (331)
T cd06649 69 YGAFYSDGEISICMEHMDGGSLDQVLKE----AKRIPEEILGKVSIAVLRGLAYLRE--KHQIMHRDVKPSNILVNSRGE 142 (331)
T ss_pred EEEEEECCEEEEEeecCCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHhh--cCCEEcCCCChhhEEEcCCCc
Confidence 9999999999999999999999999865 3568899999999999999999953 246999999999999999999
Q ss_pred EEEeccCCccccCCCCceeeEeeecccccccCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCccc
Q 011360 351 ACISDLGLAMAIPDGYTRVLISYVLGTMAYIAPEYFQQPELSEKCDIFSFGMLLISLVRGVPSFVF 416 (487)
Q Consensus 351 ~kl~DFg~s~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DvwslG~~l~elltg~~pf~~ 416 (487)
+||+|||++........ ....||+.|+|||++.+..++.++|||||||++|+|+||+.||..
T Consensus 143 ~kl~Dfg~~~~~~~~~~----~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~ 204 (331)
T cd06649 143 IKLCDFGVSGQLIDSMA----NSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVELAIGRYPIPP 204 (331)
T ss_pred EEEccCccccccccccc----ccCCCCcCcCCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCC
Confidence 99999999876543322 345689999999999998999999999999999999999999953
No 43
>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor
Probab=100.00 E-value=9.2e-41 Score=319.53 Aligned_cols=259 Identities=22% Similarity=0.300 Sum_probs=203.1
Q ss_pred cccccccccccccceeEEEEEecC--CCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCCCCccc
Q 011360 192 DCFASLEKIGSGGCGEVYKAELPG--SNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQIRHRNILP 269 (487)
Q Consensus 192 ~~~~~~~~lg~G~~g~v~~~~~~~--~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~ 269 (487)
++|.+.+.||+|+||.||+|.+.. ..+..||+|.+.. .........+.+|+..+.+++||||++
T Consensus 5 ~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~--------------~~~~~~~~~~~~e~~~l~~l~h~~iv~ 70 (266)
T cd05064 5 KSIKIERILGTGRFGELCRGCLKLPSKRELPVAIHTLRA--------------GCSDKQRRGFLAEALTLGQFDHSNIVR 70 (266)
T ss_pred HHeEEeeeecccCCCeEEEEEEecCCCceeeEEEEecCC--------------CCCHHHHHHHHHHHHHHhcCCCCCcCe
Confidence 358999999999999999997642 3467899998742 111233456889999999999999999
Q ss_pred cceEEecCCeeEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCC
Q 011360 270 LLAHMVRPDCHLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVLLNDDM 349 (487)
Q Consensus 270 l~~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nill~~~~ 349 (487)
+++++...+..++||||+++|+|.+++.. ....+++..++.++.|++.||+|| |++|++||||||+||+++.++
T Consensus 71 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~---~~~~l~~~~~~~~~~~i~~al~~l---H~~~iiH~dikp~nili~~~~ 144 (266)
T cd05064 71 LEGVITRGNTMMIVTEYMSNGALDSFLRK---HEGQLVAGQLMGMLPGLASGMKYL---SEMGYVHKGLAAHKVLVNSDL 144 (266)
T ss_pred EEEEEecCCCcEEEEEeCCCCcHHHHHHh---CCCCCCHHHHHHHHHHHHHHHHHH---HHCCEeeccccHhhEEEcCCC
Confidence 99999999999999999999999999864 234689999999999999999999 677899999999999999999
Q ss_pred CEEEeccCCccccCCCCceeeEeeecccccccCCcccCCCCCCchhHHHHHHHHHHHHHh-CCCCccccCCCCccccHHH
Q 011360 350 EACISDLGLAMAIPDGYTRVLISYVLGTMAYIAPEYFQQPELSEKCDIFSFGMLLISLVR-GVPSFVFHQNGEEICSPEW 428 (487)
Q Consensus 350 ~~kl~DFg~s~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DvwslG~~l~ellt-g~~pf~~~~~~~~~~~~~~ 428 (487)
.++++|||.+......... ......++..|+|||.+.+..++.++|||||||++||+++ |..||..... .+.
T Consensus 145 ~~~l~dfg~~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~p~~~~~~------~~~ 217 (266)
T cd05064 145 VCKISGFRRLQEDKSEAIY-TTMSGKSPVLWAAPEAIQYHHFSSASDVWSFGIVMWEVMSYGERPYWDMSG------QDV 217 (266)
T ss_pred cEEECCCcccccccccchh-cccCCCCceeecCHHHHhhCCccchhHHHHHHHHHHHHhcCCCCCcCcCCH------HHH
Confidence 9999999987654222111 1112335678999999999999999999999999999775 9999943321 222
Q ss_pred HHHHHhcCCCCCccCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCChHHHHHHHhhhC
Q 011360 429 LRKVMNSKNPSRAIDPRLPGNGYEKKMLHVLKIAYICTLHDPEERPNSQYVRCRLSQLL 487 (487)
Q Consensus 429 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~~il~~L~~ll 487 (487)
.... ...... . .+. ..+..+.+++.+||+.+|++|||+.+|.+.|.+++
T Consensus 218 ~~~~-~~~~~~-~----~~~----~~~~~~~~li~~c~~~~p~~RP~~~~i~~~l~~~~ 266 (266)
T cd05064 218 IKAV-EDGFRL-P----APR----NCPNLLHQLMLDCWQKERGERPRFSQIHSILSKMV 266 (266)
T ss_pred HHHH-HCCCCC-C----CCC----CCCHHHHHHHHHHcCCCchhCCCHHHHHHHHHhhC
Confidence 2222 222111 1 111 12345889999999999999999999999998764
No 44
>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt
Probab=100.00 E-value=6.7e-41 Score=324.79 Aligned_cols=247 Identities=21% Similarity=0.323 Sum_probs=199.8
Q ss_pred ccccccccccccceeEEEEEecCCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCCCCccccce
Q 011360 193 CFASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQIRHRNILPLLA 272 (487)
Q Consensus 193 ~~~~~~~lg~G~~g~v~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~ 272 (487)
+|.+.+.||.|+||.||+|.. ..+++.||+|++... ..........+.+|+.+++.++||||+++++
T Consensus 2 ~y~~~~~lg~G~~g~Vy~~~~-~~~~~~~aiK~~~~~------------~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~ 68 (291)
T cd05612 2 DLERIKTVGTGTFGRVHLVRD-RISEHYYALKVMAIP------------EVIRLKQEQHVHNEKRVLKEVSHPFIIRLFW 68 (291)
T ss_pred CceeeeeeecCCCeEEEEEEE-cCCCCEEEEEEEEHH------------HHhhhHHHHHHHHHHHHHHhCCCCcHhhhHh
Confidence 588999999999999999975 457899999987321 1111223456788999999999999999999
Q ss_pred EEecCCeeEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCCEE
Q 011360 273 HMVRPDCHLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVLLNDDMEAC 352 (487)
Q Consensus 273 ~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nill~~~~~~k 352 (487)
++.+.+..|+||||+++|+|.+++.. ...+++..+..++.|++.||+|| |++||+||||||+|||++.++.+|
T Consensus 69 ~~~~~~~~~lv~e~~~~~~L~~~~~~----~~~~~~~~~~~~~~qi~~~l~~l---H~~~i~H~dlkp~NIli~~~~~~k 141 (291)
T cd05612 69 TEHDQRFLYMLMEYVPGGELFSYLRN----SGRFSNSTGLFYASEIVCALEYL---HSKEIVYRDLKPENILLDKEGHIK 141 (291)
T ss_pred hhccCCeEEEEEeCCCCCCHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHH---HHCCeeecCCCHHHeEECCCCCEE
Confidence 99999999999999999999999865 45688999999999999999999 778999999999999999999999
Q ss_pred EeccCCccccCCCCceeeEeeecccccccCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCccccCCCCccccHHHHHHH
Q 011360 353 ISDLGLAMAIPDGYTRVLISYVLGTMAYIAPEYFQQPELSEKCDIFSFGMLLISLVRGVPSFVFHQNGEEICSPEWLRKV 432 (487)
Q Consensus 353 l~DFg~s~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DvwslG~~l~elltg~~pf~~~~~~~~~~~~~~~~~~ 432 (487)
|+|||++....... ....||+.|+|||++.+..++.++|||||||++|+|++|..||.... ..+....+
T Consensus 142 l~Dfg~~~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~------~~~~~~~i 210 (291)
T cd05612 142 LTDFGFAKKLRDRT-----WTLCGTPEYLAPEVIQSKGHNKAVDWWALGILIYEMLVGYPPFFDDN------PFGIYEKI 210 (291)
T ss_pred EEecCcchhccCCc-----ccccCChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC------HHHHHHHH
Confidence 99999987654322 23468999999999999889999999999999999999999994432 12223333
Q ss_pred HhcCCCCCccCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCC-----hHHHHH
Q 011360 433 MNSKNPSRAIDPRLPGNGYEKKMLHVLKIAYICTLHDPEERPN-----SQYVRC 481 (487)
Q Consensus 433 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs-----~~~il~ 481 (487)
.... . .++.. ....+.+++.+||+.||.+||+ ++++++
T Consensus 211 ~~~~-~------~~~~~----~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~ 253 (291)
T cd05612 211 LAGK-L------EFPRH----LDLYAKDLIKKLLVVDRTRRLGNMKNGADDVKN 253 (291)
T ss_pred HhCC-c------CCCcc----CCHHHHHHHHHHcCCCHHHccCCccCCHHHHhc
Confidence 2221 1 11111 1245889999999999999995 777764
No 45
>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be
Probab=100.00 E-value=7.5e-41 Score=329.28 Aligned_cols=245 Identities=20% Similarity=0.288 Sum_probs=195.8
Q ss_pred cccccccceeEEEEEecCCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCCCCccccceEEecC
Q 011360 198 EKIGSGGCGEVYKAELPGSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQIRHRNILPLLAHMVRP 277 (487)
Q Consensus 198 ~~lg~G~~g~v~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~ 277 (487)
+.||+|+||.||+++. ..+|+.||+|++.. ...........+.+|+.++..++||||+++++++...
T Consensus 1 ~~lG~G~~g~Vy~~~~-~~~~~~~aiK~~~~------------~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~ 67 (323)
T cd05571 1 KLLGKGTFGKVILVRE-KATGKYYAMKILKK------------EVIIAKDEVAHTLTESRVLQNTRHPFLTALKYSFQTH 67 (323)
T ss_pred CeeeeCCCeEEEEEEE-CCCCCEEEEEEEEH------------HHhhhhHHHHHHHHHHHHHHhCCCCCCCCEEEEEEcC
Confidence 4689999999999975 45889999998842 1112233455678899999999999999999999999
Q ss_pred CeeEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCCEEEeccC
Q 011360 278 DCHLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVLLNDDMEACISDLG 357 (487)
Q Consensus 278 ~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nill~~~~~~kl~DFg 357 (487)
+..|+||||+++|+|.+++.. ...+++..+..++.|++.||+|| |++||+||||||+||+++.++.+||+|||
T Consensus 68 ~~~~lv~e~~~~~~L~~~l~~----~~~~~~~~~~~~~~qi~~~L~~l---H~~~ivHrDlkp~NIll~~~~~~kl~DfG 140 (323)
T cd05571 68 DRLCFVMEYANGGELFFHLSR----ERVFSEDRARFYGAEIVSALGYL---HSCDVVYRDLKLENLMLDKDGHIKITDFG 140 (323)
T ss_pred CEEEEEEeCCCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHH---HhCCeEeCCCCHHHEEECCCCCEEEeeCC
Confidence 999999999999999998864 45789999999999999999999 77889999999999999999999999999
Q ss_pred CccccCCCCceeeEeeecccccccCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCccccCCCCccccHHHHHHHHhcCC
Q 011360 358 LAMAIPDGYTRVLISYVLGTMAYIAPEYFQQPELSEKCDIFSFGMLLISLVRGVPSFVFHQNGEEICSPEWLRKVMNSKN 437 (487)
Q Consensus 358 ~s~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DvwslG~~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~ 437 (487)
++........ ......||+.|+|||++.+..++.++|||||||++|||++|..||...+. ........ ...
T Consensus 141 ~a~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~------~~~~~~~~-~~~ 211 (323)
T cd05571 141 LCKEGISDGA--TMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH------EKLFELIL-MEE 211 (323)
T ss_pred CCcccccCCC--cccceecCccccChhhhcCCCCCccccCcccchhhhhhhcCCCCCCCCCH------HHHHHHHH-cCC
Confidence 9875322211 12345699999999999998999999999999999999999999943221 11222222 111
Q ss_pred CCCccCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCC-----ChHHHHH
Q 011360 438 PSRAIDPRLPGNGYEKKMLHVLKIAYICTLHDPEERP-----NSQYVRC 481 (487)
Q Consensus 438 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RP-----s~~~il~ 481 (487)
. .++. ....++.+++.+||+.||++|| ++.++++
T Consensus 212 ~------~~p~----~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~ 250 (323)
T cd05571 212 I------RFPR----TLSPEAKSLLAGLLKKDPKQRLGGGPEDAKEIME 250 (323)
T ss_pred C------CCCC----CCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHHc
Confidence 1 1111 1235688999999999999999 7888864
No 46
>PTZ00267 NIMA-related protein kinase; Provisional
Probab=100.00 E-value=1.3e-40 Score=343.87 Aligned_cols=255 Identities=19% Similarity=0.256 Sum_probs=204.3
Q ss_pred ccccccccccccceeEEEEEecCCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCCCCccccce
Q 011360 193 CFASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQIRHRNILPLLA 272 (487)
Q Consensus 193 ~~~~~~~lg~G~~g~v~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~ 272 (487)
.|.+.+.||.|+||.||+|.....++..||+|.+.. ........+..|+.++..++||||+++++
T Consensus 68 ~y~~~~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~---------------~~~~~~~~~~~E~~~l~~l~Hpniv~~~~ 132 (478)
T PTZ00267 68 MYVLTTLVGRNPTTAAFVATRGSDPKEKVVAKFVML---------------NDERQAAYARSELHCLAACDHFGIVKHFD 132 (478)
T ss_pred eEEEEEEEEeCCCcEEEEEEEcCCCCeEEEEEEccc---------------CCHHHHHHHHHHHHHHHhCCCCCEeEEEE
Confidence 489999999999999999975433377888886522 11223446678999999999999999999
Q ss_pred EEecCCeeEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCCEE
Q 011360 273 HMVRPDCHLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVLLNDDMEAC 352 (487)
Q Consensus 273 ~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nill~~~~~~k 352 (487)
++...+..|+||||+++|+|.+++.........+++..+..++.|++.||.|| |++||+||||||+|||++.++.+|
T Consensus 133 ~~~~~~~~~lv~E~~~gg~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~l---H~~~ivHrDlkp~NIll~~~~~~k 209 (478)
T PTZ00267 133 DFKSDDKLLLIMEYGSGGDLNKQIKQRLKEHLPFQEYEVGLLFYQIVLALDEV---HSRKMMHRDLKSANIFLMPTGIIK 209 (478)
T ss_pred EEEECCEEEEEEECCCCCCHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHH---HhCCEEECCcCHHhEEECCCCcEE
Confidence 99999999999999999999998865434456788999999999999999999 778899999999999999999999
Q ss_pred EeccCCccccCCCCceeeEeeecccccccCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCccccCCCCccccHHHHHHH
Q 011360 353 ISDLGLAMAIPDGYTRVLISYVLGTMAYIAPEYFQQPELSEKCDIFSFGMLLISLVRGVPSFVFHQNGEEICSPEWLRKV 432 (487)
Q Consensus 353 l~DFg~s~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DvwslG~~l~elltg~~pf~~~~~~~~~~~~~~~~~~ 432 (487)
|+|||+++..............+||+.|+|||++.+..++.++|||||||++|+|++|..||.... ..+.....
T Consensus 210 L~DFgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~Pf~~~~------~~~~~~~~ 283 (478)
T PTZ00267 210 LGDFGFSKQYSDSVSLDVASSFCGTPYYLAPELWERKRYSKKADMWSLGVILYELLTLHRPFKGPS------QREIMQQV 283 (478)
T ss_pred EEeCcCceecCCccccccccccCCCccccCHhHhCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCC------HHHHHHHH
Confidence 999999987654433222345679999999999999999999999999999999999999994322 22333333
Q ss_pred HhcCCCCCccCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCChHHHHH
Q 011360 433 MNSKNPSRAIDPRLPGNGYEKKMLHVLKIAYICTLHDPEERPNSQYVRC 481 (487)
Q Consensus 433 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~~il~ 481 (487)
...... . .+. ..+..+.+++.+||+.+|++|||+.+++.
T Consensus 284 ~~~~~~--~----~~~----~~s~~~~~li~~~L~~dP~~Rps~~~~l~ 322 (478)
T PTZ00267 284 LYGKYD--P----FPC----PVSSGMKALLDPLLSKNPALRPTTQQLLH 322 (478)
T ss_pred HhCCCC--C----CCc----cCCHHHHHHHHHHhccChhhCcCHHHHHh
Confidence 322211 0 111 12246889999999999999999999864
No 47
>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes
Probab=100.00 E-value=1.2e-40 Score=322.39 Aligned_cols=267 Identities=19% Similarity=0.240 Sum_probs=199.8
Q ss_pred ccccccccccccceeEEEEEecCCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCCCCccccce
Q 011360 193 CFASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQIRHRNILPLLA 272 (487)
Q Consensus 193 ~~~~~~~lg~G~~g~v~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~ 272 (487)
+|.+.+.||.|+||.||+++. ..++..||+|++... .........+.+|+.+++.++||||+++++
T Consensus 2 ~y~~~~~lg~g~~~~v~~~~~-~~~~~~~avK~~~~~-------------~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~ 67 (287)
T cd07848 2 KFEVLGVVGEGAYGVVLKCRH-KETKEIVAIKKFKDS-------------EENEEVKETTLRELKMLRTLKQENIVELKE 67 (287)
T ss_pred CceEEEEecccCCEEEEEEEE-CCCCcEEEEEEEecc-------------cccccchhhHHHHHHHHHhCCCccccchhh
Confidence 589999999999999999975 457889999988431 112223456778999999999999999999
Q ss_pred EEecCCeeEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCCEE
Q 011360 273 HMVRPDCHLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVLLNDDMEAC 352 (487)
Q Consensus 273 ~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nill~~~~~~k 352 (487)
++...+..|+||||++++.+..+.. ....+++..+..++.|++.||.|| |+.||+||||||+||+++.++.+|
T Consensus 68 ~~~~~~~~~lv~e~~~~~~l~~~~~----~~~~~~~~~~~~~~~qi~~~L~~l---H~~~i~H~dlkp~Nill~~~~~~k 140 (287)
T cd07848 68 AFRRRGKLYLVFEYVEKNMLELLEE----MPNGVPPEKVRSYIYQLIKAIHWC---HKNDIVHRDIKPENLLISHNDVLK 140 (287)
T ss_pred hEecCCEEEEEEecCCCCHHHHHHh----cCCCCCHHHHHHHHHHHHHHHHHH---HHCCeecCCCCHHHEEEcCCCcEE
Confidence 9999999999999998877665443 245688999999999999999999 678899999999999999999999
Q ss_pred EeccCCccccCCCCceeeEeeecccccccCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCccccCCCCcc---------
Q 011360 353 ISDLGLAMAIPDGYTRVLISYVLGTMAYIAPEYFQQPELSEKCDIFSFGMLLISLVRGVPSFVFHQNGEEI--------- 423 (487)
Q Consensus 353 l~DFg~s~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DvwslG~~l~elltg~~pf~~~~~~~~~--------- 423 (487)
|+|||++......... ......||+.|+|||++.+..++.++|||||||++|+|++|.+||.........
T Consensus 141 l~Dfg~~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~ 219 (287)
T cd07848 141 LCDFGFARNLSEGSNA-NYTEYVATRWYRSPELLLGAPYGKAVDMWSVGCILGELSDGQPLFPGESEIDQLFTIQKVLGP 219 (287)
T ss_pred EeeccCcccccccccc-cccccccccccCCcHHHcCCCCCCchhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhhCC
Confidence 9999999876433221 113356899999999999888999999999999999999999999654321110
Q ss_pred ccHHHHHHHHhcCCCCCccCCCCCC------CCcHHHHHHHHHHHhhccCCCCCCCCChHHHHH
Q 011360 424 CSPEWLRKVMNSKNPSRAIDPRLPG------NGYEKKMLHVLKIAYICTLHDPEERPNSQYVRC 481 (487)
Q Consensus 424 ~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~l~~li~~cl~~~P~~RPs~~~il~ 481 (487)
....................+.... ......+.++.+++.+||+.||++|||++++++
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~~L~~~P~~R~s~~~~l~ 283 (287)
T cd07848 220 LPAEQMKLFYSNPRFHGLRFPAVNHPQSLERRYLGILSGVLLDLMKNLLKLNPTDRYLTEQCLN 283 (287)
T ss_pred CCHHHHHhhhccchhcccccCcccCcccHHHhhhcccCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence 0011111111110000000000000 011123457999999999999999999999875
No 48
>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i
Probab=100.00 E-value=1.2e-40 Score=321.96 Aligned_cols=254 Identities=26% Similarity=0.355 Sum_probs=199.0
Q ss_pred cccccccccccceeEEEEEecCCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCCCCccccceE
Q 011360 194 FASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQIRHRNILPLLAH 273 (487)
Q Consensus 194 ~~~~~~lg~G~~g~v~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~ 273 (487)
|...+.||.|+||.||++.. ..+++.||+|.+... ..........+.+|+.++.+++||||++++++
T Consensus 2 f~~~~~lg~G~~g~V~~~~~-~~~~~~~avK~~~~~------------~~~~~~~~~~~~~E~~il~~l~~~~iv~~~~~ 68 (285)
T cd05631 2 FRHYRVLGKGGFGEVCACQV-RATGKMYACKKLEKK------------RIKKRKGEAMALNEKRILEKVNSRFVVSLAYA 68 (285)
T ss_pred ceEEEEEecCCCEEEEEEEE-ecCCceEEEEEeeHh------------hhhhhhhHHHHHHHHHHHHhcCCCcEEEEEEE
Confidence 77889999999999999975 457899999987320 11112233456789999999999999999999
Q ss_pred EecCCeeEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCCEEE
Q 011360 274 MVRPDCHLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVLLNDDMEACI 353 (487)
Q Consensus 274 ~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nill~~~~~~kl 353 (487)
+...+..++||||+++|+|.+++.. .....+++..+..++.|++.||.|| |+.||+||||||+|||++.++.++|
T Consensus 69 ~~~~~~~~lv~e~~~~g~L~~~~~~--~~~~~~~~~~~~~~~~qi~~~l~~l---H~~~iiH~dikp~Nill~~~~~~kl 143 (285)
T cd05631 69 YETKDALCLVLTIMNGGDLKFHIYN--MGNPGFDEQRAIFYAAELCCGLEDL---QRERIVYRDLKPENILLDDRGHIRI 143 (285)
T ss_pred EccCCeEEEEEEecCCCcHHHHHHh--hCCCCCCHHHHHHHHHHHHHHHHHH---HhCCEEeCCCCHHHEEECCCCCEEE
Confidence 9999999999999999999988754 2234688999999999999999999 7788999999999999999999999
Q ss_pred eccCCccccCCCCceeeEeeecccccccCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCccccCCCCccccHHHHHHHH
Q 011360 354 SDLGLAMAIPDGYTRVLISYVLGTMAYIAPEYFQQPELSEKCDIFSFGMLLISLVRGVPSFVFHQNGEEICSPEWLRKVM 433 (487)
Q Consensus 354 ~DFg~s~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DvwslG~~l~elltg~~pf~~~~~~~~~~~~~~~~~~~ 433 (487)
+|||++........ .....||+.|+|||++.+..++.++|||||||++|+|++|..||....... ..+......
T Consensus 144 ~Dfg~~~~~~~~~~---~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~---~~~~~~~~~ 217 (285)
T cd05631 144 SDLGLAVQIPEGET---VRGRVGTVGYMAPEVINNEKYTFSPDWWGLGCLIYEMIQGQSPFRKRKERV---KREEVDRRV 217 (285)
T ss_pred eeCCCcEEcCCCCe---ecCCCCCCCccCHhhhcCCCCCcccCchhHHHHHHHHHhCCCCCCCCCcch---hHHHHHHHh
Confidence 99999977543322 134568999999999999999999999999999999999999996543211 111111111
Q ss_pred hcCCCCCccCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCC-----hHHHHH
Q 011360 434 NSKNPSRAIDPRLPGNGYEKKMLHVLKIAYICTLHDPEERPN-----SQYVRC 481 (487)
Q Consensus 434 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs-----~~~il~ 481 (487)
.. ....... ..+.++.+++.+||+.||++||| +.++++
T Consensus 218 ~~--~~~~~~~--------~~s~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~ 260 (285)
T cd05631 218 KE--DQEEYSE--------KFSEDAKSICRMLLTKNPKERLGCRGNGAAGVKQ 260 (285)
T ss_pred hc--ccccCCc--------cCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHhc
Confidence 11 1111111 22356889999999999999997 677765
No 49
>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional
Probab=100.00 E-value=8.9e-41 Score=330.51 Aligned_cols=249 Identities=22% Similarity=0.294 Sum_probs=201.0
Q ss_pred cccccccccccccceeEEEEEecCCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCCCCccccc
Q 011360 192 DCFASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQIRHRNILPLL 271 (487)
Q Consensus 192 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~ 271 (487)
++|.+.+.||.|+||.||+|.+...++..||+|++.. ...........+.+|+.++..++||||++++
T Consensus 30 ~~y~~~~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~------------~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~ 97 (340)
T PTZ00426 30 EDFNFIRTLGTGSFGRVILATYKNEDFPPVAIKRFEK------------SKIIKQKQVDHVFSERKILNYINHPFCVNLY 97 (340)
T ss_pred hhcEEEEEEeecCCeEEEEEEEECCCCeEEEEEEEEH------------HHhhhhhhHHHHHHHHHHHHhCCCCCCcceE
Confidence 4699999999999999999987655557899998732 1111233455678899999999999999999
Q ss_pred eEEecCCeeEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCCE
Q 011360 272 AHMVRPDCHLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVLLNDDMEA 351 (487)
Q Consensus 272 ~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nill~~~~~~ 351 (487)
+++.+.+..|+||||+++|+|.+++.. ...+++..+..++.|++.||.|| |++||+||||||+|||++.++.+
T Consensus 98 ~~~~~~~~~~lv~Ey~~~g~L~~~i~~----~~~~~~~~~~~~~~qi~~aL~~L---H~~~ivHrDLkp~NILl~~~~~i 170 (340)
T PTZ00426 98 GSFKDESYLYLVLEFVIGGEFFTFLRR----NKRFPNDVGCFYAAQIVLIFEYL---QSLNIVYRDLKPENLLLDKDGFI 170 (340)
T ss_pred EEEEeCCEEEEEEeCCCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHH---HHCCeEccCCCHHHEEECCCCCE
Confidence 999999999999999999999999865 45689999999999999999999 77889999999999999999999
Q ss_pred EEeccCCccccCCCCceeeEeeecccccccCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCccccCCCCccccHHHHHH
Q 011360 352 CISDLGLAMAIPDGYTRVLISYVLGTMAYIAPEYFQQPELSEKCDIFSFGMLLISLVRGVPSFVFHQNGEEICSPEWLRK 431 (487)
Q Consensus 352 kl~DFg~s~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DvwslG~~l~elltg~~pf~~~~~~~~~~~~~~~~~ 431 (487)
||+|||++....... ....||+.|+|||++.+..++.++|||||||++|||++|..||..... ......
T Consensus 171 kL~DFG~a~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~------~~~~~~ 239 (340)
T PTZ00426 171 KMTDFGFAKVVDTRT-----YTLCGTPEYIAPEILLNVGHGKAADWWTLGIFIYEILVGCPPFYANEP------LLIYQK 239 (340)
T ss_pred EEecCCCCeecCCCc-----ceecCChhhcCHHHHhCCCCCccccccchhhHHHHHhcCCCCCCCCCH------HHHHHH
Confidence 999999997654321 345699999999999988899999999999999999999999943321 112222
Q ss_pred HHhcCCCCCccCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCC-----ChHHHHH
Q 011360 432 VMNSKNPSRAIDPRLPGNGYEKKMLHVLKIAYICTLHDPEERP-----NSQYVRC 481 (487)
Q Consensus 432 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RP-----s~~~il~ 481 (487)
... ... .+++.+ ...+.+++.+||+.+|.+|+ |++++++
T Consensus 240 i~~-~~~--~~p~~~--------~~~~~~li~~~l~~dp~~R~~~~~~~~~~~~~ 283 (340)
T PTZ00426 240 ILE-GII--YFPKFL--------DNNCKHLMKKLLSHDLTKRYGNLKKGAQNVKE 283 (340)
T ss_pred Hhc-CCC--CCCCCC--------CHHHHHHHHHHcccCHHHcCCCCCCCHHHHHc
Confidence 222 111 111111 24578999999999999995 8888765
No 50
>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4.5e-41 Score=312.28 Aligned_cols=262 Identities=27% Similarity=0.418 Sum_probs=205.2
Q ss_pred ccccccccccccceeEEEEEecCCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCCCCccccce
Q 011360 193 CFASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQIRHRNILPLLA 272 (487)
Q Consensus 193 ~~~~~~~lg~G~~g~v~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~ 272 (487)
.|..++.||.|++|.|..+. +..+|+.||||++. +........++..+|+.+++.++|+||+.+++
T Consensus 23 ~y~~~~~iG~GAyGvVcsA~-~~~t~~~VAIKKi~-------------~~F~~~~~akRtlRElklLr~~~HeNIi~l~d 88 (359)
T KOG0660|consen 23 YYVLIEPIGRGAYGVVCSAK-DKRTGEKVAIKKIL-------------NPFENQIDAKRTLRELKLLRHLRHENIIGLLD 88 (359)
T ss_pred eecccccccCcceeeEEEEE-EcCCCCEeehhhhh-------------hhhhchHHHHHHHHHHHHHHHhcCCCcceEEe
Confidence 46668999999999999996 55788999999883 12344556778899999999999999999999
Q ss_pred EEec-----CCeeEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCC
Q 011360 273 HMVR-----PDCHLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVLLND 347 (487)
Q Consensus 273 ~~~~-----~~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nill~~ 347 (487)
++.. -+.+|+|+|+| +.+|...++. +..++...+..++.|+++||+|+ |+.||+||||||.|+|++.
T Consensus 89 i~~p~~~~~f~DvYiV~elM-etDL~~iik~----~~~L~d~H~q~f~YQiLrgLKyi---HSAnViHRDLKPsNll~n~ 160 (359)
T KOG0660|consen 89 IFRPPSRDKFNDVYLVFELM-ETDLHQIIKS----QQDLTDDHAQYFLYQILRGLKYI---HSANVIHRDLKPSNLLLNA 160 (359)
T ss_pred ecccccccccceeEEehhHH-hhHHHHHHHc----CccccHHHHHHHHHHHHHhcchh---hcccccccccchhheeecc
Confidence 8875 24679999999 6799998864 56699999999999999999999 8999999999999999999
Q ss_pred CCCEEEeccCCccccCCCCceeeEeeecccccccCCcccC-CCCCCchhHHHHHHHHHHHHHhCCCCccccCCCCcc---
Q 011360 348 DMEACISDLGLAMAIPDGYTRVLISYVLGTMAYIAPEYFQ-QPELSEKCDIFSFGMLLISLVRGVPSFVFHQNGEEI--- 423 (487)
Q Consensus 348 ~~~~kl~DFg~s~~~~~~~~~~~~~~~~gt~~y~aPE~l~-~~~~~~~~DvwslG~~l~elltg~~pf~~~~~~~~~--- 423 (487)
+..+||+|||+|+...........+..+.|.+|.|||++. ...|+.+.||||.||++.||++|++.|.+.+.....
T Consensus 161 ~c~lKI~DFGLAR~~~~~~~~~~mTeYVaTRWYRAPElll~~~~Yt~aiDiWSvGCI~AEmL~gkplFpG~d~v~Ql~lI 240 (359)
T KOG0660|consen 161 DCDLKICDFGLARYLDKFFEDGFMTEYVATRWYRAPELLLNSSEYTKAIDIWSVGCILAEMLTGKPLFPGKDYVHQLQLI 240 (359)
T ss_pred CCCEEeccccceeeccccCcccchhcceeeeeecCHHHHhccccccchhhhhhhhHHHHHHHcCCCCCCCCchHHHHHHH
Confidence 9999999999999876542333335677899999999875 458999999999999999999999999765421111
Q ss_pred ------cc--------HHHHHHHHhc--CCCCCccCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCChHHHHH
Q 011360 424 ------CS--------PEWLRKVMNS--KNPSRAIDPRLPGNGYEKKMLHVLKIAYICTLHDPEERPNSQYVRC 481 (487)
Q Consensus 424 ------~~--------~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~~il~ 481 (487)
.. .+..+.++.. ..+...+...+| ......++++.+||..||.+|+|+++.++
T Consensus 241 ~~~lGtP~~e~l~~i~s~~ar~yi~slp~~p~~~f~~~fp-----~a~p~AidLlekmL~fdP~kRita~eAL~ 309 (359)
T KOG0660|consen 241 LELLGTPSEEDLQKIRSEKARPYIKSLPQIPKQPFSSIFP-----NANPLAIDLLEKMLVFDPKKRITAEEALA 309 (359)
T ss_pred HHhcCCCCHHHHHHhccHHHHHHHHhCCCCCCCCHHHHcC-----CCCHHHHHHHHHHhccCccccCCHHHHhc
Confidence 00 1112222221 112222222222 23356889999999999999999999875
No 51
>PTZ00263 protein kinase A catalytic subunit; Provisional
Probab=100.00 E-value=1.2e-40 Score=328.55 Aligned_cols=247 Identities=23% Similarity=0.324 Sum_probs=200.2
Q ss_pred cccccccccccccceeEEEEEecCCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCCCCccccc
Q 011360 192 DCFASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQIRHRNILPLL 271 (487)
Q Consensus 192 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~ 271 (487)
++|.+.+.||.|+||.||+|++ ..+++.||+|.+.. ...........+.+|+.++.+++||||++++
T Consensus 18 ~~y~~~~~lg~G~~g~V~~~~~-~~~~~~~aiK~~~~------------~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~ 84 (329)
T PTZ00263 18 SDFEMGETLGTGSFGRVRIAKH-KGTGEYYAIKCLKK------------REILKMKQVQHVAQEKSILMELSHPFIVNMM 84 (329)
T ss_pred hheEEEEEEEecCCeEEEEEEE-CCCCCEEEEEEEEH------------HHHhhhhhHHHHHHHHHHHHhCCCCCCCcEE
Confidence 4599999999999999999975 45788999998842 1111223456788999999999999999999
Q ss_pred eEEecCCeeEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCCE
Q 011360 272 AHMVRPDCHLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVLLNDDMEA 351 (487)
Q Consensus 272 ~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nill~~~~~~ 351 (487)
+++..++..|+||||+++|+|.+++.. ...+++..+..++.|++.||.|| |++||+||||||+|||++.++.+
T Consensus 85 ~~~~~~~~~~lv~e~~~~~~L~~~l~~----~~~~~~~~~~~~~~qi~~aL~~L---H~~~ivH~dlkp~NIll~~~~~~ 157 (329)
T PTZ00263 85 CSFQDENRVYFLLEFVVGGELFTHLRK----AGRFPNDVAKFYHAELVLAFEYL---HSKDIIYRDLKPENLLLDNKGHV 157 (329)
T ss_pred EEEEcCCEEEEEEcCCCCChHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHH---HHCCeeecCCCHHHEEECCCCCE
Confidence 999999999999999999999999865 45688899999999999999999 77889999999999999999999
Q ss_pred EEeccCCccccCCCCceeeEeeecccccccCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCccccCCCCccccHHHHHH
Q 011360 352 CISDLGLAMAIPDGYTRVLISYVLGTMAYIAPEYFQQPELSEKCDIFSFGMLLISLVRGVPSFVFHQNGEEICSPEWLRK 431 (487)
Q Consensus 352 kl~DFg~s~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DvwslG~~l~elltg~~pf~~~~~~~~~~~~~~~~~ 431 (487)
||+|||++....... ....||+.|+|||++.+..++.++|||||||++|+|++|..||.... .......
T Consensus 158 kl~Dfg~~~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~------~~~~~~~ 226 (329)
T PTZ00263 158 KVTDFGFAKKVPDRT-----FTLCGTPEYLAPEVIQSKGHGKAVDWWTMGVLLYEFIAGYPPFFDDT------PFRIYEK 226 (329)
T ss_pred EEeeccCceEcCCCc-----ceecCChhhcCHHHHcCCCCCCcceeechHHHHHHHHcCCCCCCCCC------HHHHHHH
Confidence 999999998664332 23468999999999999899999999999999999999999994322 1122222
Q ss_pred HHhcCCCCCccCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCC-----hHHHH
Q 011360 432 VMNSKNPSRAIDPRLPGNGYEKKMLHVLKIAYICTLHDPEERPN-----SQYVR 480 (487)
Q Consensus 432 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs-----~~~il 480 (487)
... ..+ . ++.. ....+.+++.+||+.||.+||+ +++++
T Consensus 227 i~~-~~~--~----~p~~----~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll 269 (329)
T PTZ00263 227 ILA-GRL--K----FPNW----FDGRARDLVKGLLQTDHTKRLGTLKGGVADVK 269 (329)
T ss_pred Hhc-CCc--C----CCCC----CCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHh
Confidence 222 211 1 1111 2245789999999999999997 57665
No 52
>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.
Probab=100.00 E-value=1.1e-40 Score=329.59 Aligned_cols=255 Identities=19% Similarity=0.290 Sum_probs=202.1
Q ss_pred ccccccccccccceeEEEEEecCCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCCCCccccce
Q 011360 193 CFASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQIRHRNILPLLA 272 (487)
Q Consensus 193 ~~~~~~~lg~G~~g~v~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~ 272 (487)
+|.+.+.||.|+||.||+|.. ..+++.||+|++... ..........+..|+.++..++||||+++++
T Consensus 2 ~y~~~~~ig~G~~g~Vy~~~~-~~~~~~vaiK~~~~~------------~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~ 68 (333)
T cd05600 2 DFQILTQVGQGGYGQVFLAKK-KDTGEIVALKRMKKS------------LLFKLNEVRHVLTERDILTTTKSEWLVKLLY 68 (333)
T ss_pred CcEEEEEEeecCCeEEEEEEE-CCCCCEEEEEEEEHH------------HHhhhhHHHHHHHHHHHHHhCCCCCCccEEE
Confidence 589999999999999999975 457889999988421 1112234567788999999999999999999
Q ss_pred EEecCCeeEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCCEE
Q 011360 273 HMVRPDCHLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVLLNDDMEAC 352 (487)
Q Consensus 273 ~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nill~~~~~~k 352 (487)
++...+..|+||||+++|+|.+++.. ...+++..+..++.|++.||.|| |++||+||||||+||+++.++.+|
T Consensus 69 ~~~~~~~~~lv~e~~~g~~L~~~l~~----~~~l~~~~~~~~~~qi~~~l~~l---H~~~ivH~dlkp~Nil~~~~~~~k 141 (333)
T cd05600 69 AFQDDEYLYLAMEYVPGGDFRTLLNN----LGVLSEDHARFYMAEMFEAVDAL---HELGYIHRDLKPENFLIDASGHIK 141 (333)
T ss_pred EEEcCCEEEEEEeCCCCCCHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHH---HHCCccccCCCHHHEEECCCCCEE
Confidence 99999999999999999999999964 45688999999999999999999 778899999999999999999999
Q ss_pred EeccCCccccCCCCceeeEeeecccccccCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCccccCCCCccccHHHHHHH
Q 011360 353 ISDLGLAMAIPDGYTRVLISYVLGTMAYIAPEYFQQPELSEKCDIFSFGMLLISLVRGVPSFVFHQNGEEICSPEWLRKV 432 (487)
Q Consensus 353 l~DFg~s~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DvwslG~~l~elltg~~pf~~~~~~~~~~~~~~~~~~ 432 (487)
|+|||++..... ......||+.|+|||++.+..++.++|||||||++|||++|..||..... .+.....
T Consensus 142 L~Dfg~a~~~~~-----~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~------~~~~~~i 210 (333)
T cd05600 142 LTDFGLSKGIVT-----YANSVVGSPDYMAPEVLRGKGYDFTVDYWSLGCMLYEFLCGFPPFSGSTP------NETWENL 210 (333)
T ss_pred EEeCcCCccccc-----ccCCcccCccccChhHhcCCCCCCccceecchHHHhhhhhCCCCCCCCCH------HHHHHHH
Confidence 999999976543 12345689999999999998999999999999999999999999954322 1111111
Q ss_pred HhcCCCCCccCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCChHHHHH
Q 011360 433 MNSKNPSRAIDPRLPGNGYEKKMLHVLKIAYICTLHDPEERPNSQYVRC 481 (487)
Q Consensus 433 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~~il~ 481 (487)
...... +............+.++.+++.+||..+|++|||+.++++
T Consensus 211 ~~~~~~---~~~~~~~~~~~~~s~~~~~li~~~l~~~~~rr~s~~~ll~ 256 (333)
T cd05600 211 KYWKET---LQRPVYDDPRFNLSDEAWDLITKLINDPSRRFGSLEDIKN 256 (333)
T ss_pred Hhcccc---ccCCCCCccccccCHHHHHHHHHHhhChhhhcCCHHHHHh
Confidence 111110 0000000001223456889999999999999999999985
No 53
>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity. Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....
Probab=100.00 E-value=7.9e-41 Score=318.69 Aligned_cols=254 Identities=30% Similarity=0.477 Sum_probs=195.9
Q ss_pred ccccccccccceeEEEEEec---CCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCCCCccccc
Q 011360 195 ASLEKIGSGGCGEVYKAELP---GSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQIRHRNILPLL 271 (487)
Q Consensus 195 ~~~~~lg~G~~g~v~~~~~~---~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~ 271 (487)
.+.+.||.|.||.||+|.+. ...+..|+||.+.. .........+.+|+..+++++||||++++
T Consensus 2 ~~~~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~--------------~~~~~~~~~~~~e~~~l~~l~h~ni~~~~ 67 (259)
T PF07714_consen 2 KLIKQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKP--------------SSSEEEEEEFLNEIQILRKLRHPNIVKLY 67 (259)
T ss_dssp EEEEEEEEESSEEEEEEEEESTTTSSEEEEEEEEEST--------------TSSHHHHHHHHHHHHHHHTHSBTTBE-EE
T ss_pred EEeeEEccCCCcEEEEEEEEcccCCCCEEEEEEEecc--------------ccccccceeeeeccccccccccccccccc
Confidence 35678999999999999986 23467899998832 22233467888999999999999999999
Q ss_pred eEEecCCeeEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCCE
Q 011360 272 AHMVRPDCHLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVLLNDDMEA 351 (487)
Q Consensus 272 ~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nill~~~~~~ 351 (487)
|++...+..++|||||++|+|.++|.. .....+++..+..++.|++.||.|| |+++++|+||+++||+++.++.+
T Consensus 68 g~~~~~~~~~lv~e~~~~g~L~~~L~~--~~~~~~~~~~~~~i~~~i~~~l~~L---h~~~iiH~~l~~~nill~~~~~~ 142 (259)
T PF07714_consen 68 GFCIENEPLFLVMEYCPGGSLDDYLKS--KNKEPLSEQQRLSIAIQIAEALSYL---HSNNIIHGNLSPSNILLDSNGQV 142 (259)
T ss_dssp EEEESSSSEEEEEE--TTEBHHHHHHH--TCTTTSBHHHHHHHHHHHHHHHHHH---HHTTEEEST-SGGGEEEETTTEE
T ss_pred ccccccccccccccccccccccccccc--ccccccccccccccccccccccccc---ccccccccccccccccccccccc
Confidence 999988889999999999999999986 2356789999999999999999999 56779999999999999999999
Q ss_pred EEeccCCccccCCCCceeeEeeecccccccCCcccCCCCCCchhHHHHHHHHHHHHHh-CCCCccccCCCCccccHHHHH
Q 011360 352 CISDLGLAMAIPDGYTRVLISYVLGTMAYIAPEYFQQPELSEKCDIFSFGMLLISLVR-GVPSFVFHQNGEEICSPEWLR 430 (487)
Q Consensus 352 kl~DFg~s~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DvwslG~~l~ellt-g~~pf~~~~~~~~~~~~~~~~ 430 (487)
||+|||++.................+..|+|||.+.+..++.++||||||+++||+++ |..||... ...+...
T Consensus 143 Kl~~f~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVysfG~~l~ei~~~~~~p~~~~------~~~~~~~ 216 (259)
T PF07714_consen 143 KLSDFGLSRPISEKSKYKNDSSQQLPLRYLAPEVLKDGEYTKKSDVYSFGMLLYEILTLGKFPFSDY------DNEEIIE 216 (259)
T ss_dssp EEESTTTGEETTTSSSEEESTTSESGGGGS-HHHHHHSEESHHHHHHHHHHHHHHHHTTSSGTTTTS------CHHHHHH
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc------ccccccc
Confidence 9999999987633322222233457789999999988889999999999999999999 68888322 3333444
Q ss_pred HHHhcCCCCCccCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCChHHHHHHH
Q 011360 431 KVMNSKNPSRAIDPRLPGNGYEKKMLHVLKIAYICTLHDPEERPNSQYVRCRL 483 (487)
Q Consensus 431 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~~il~~L 483 (487)
.......+. .+..+ +..+.+++..||+.+|++|||+++|++.|
T Consensus 217 ~~~~~~~~~--~~~~~--------~~~~~~li~~C~~~~p~~RPs~~~i~~~L 259 (259)
T PF07714_consen 217 KLKQGQRLP--IPDNC--------PKDIYSLIQQCWSHDPEKRPSFQEILQEL 259 (259)
T ss_dssp HHHTTEETT--SBTTS--------BHHHHHHHHHHT-SSGGGS--HHHHHHHH
T ss_pred cccccccce--eccch--------hHHHHHHHHHHcCCChhhCcCHHHHHhcC
Confidence 443332221 12222 25588999999999999999999999876
No 54
>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl
Probab=100.00 E-value=1.7e-40 Score=325.23 Aligned_cols=241 Identities=23% Similarity=0.330 Sum_probs=192.3
Q ss_pred cccccceeEEEEEecCCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCCCCccccceEEecCCe
Q 011360 200 IGSGGCGEVYKAELPGSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQIRHRNILPLLAHMVRPDC 279 (487)
Q Consensus 200 lg~G~~g~v~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~ 279 (487)
||+|+||.||+|.. ..+++.||+|++.. ...........+..|+.++.+++||||+++++++...+.
T Consensus 1 lg~G~~g~Vy~~~~-~~~~~~~aiK~i~~------------~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 67 (312)
T cd05585 1 IGKGSFGKVMQVRK-RDTQRIYALKTIRK------------AHIVSRSEVTHTLAERTVLAQVNCPFIVPLKFSFQSPEK 67 (312)
T ss_pred CCcCCCeEEEEEEE-CCCCCEEEEEEEEH------------HHhhhhhHHHHHHHHHHHHHhCCCCcEeceeeEEecCCe
Confidence 69999999999975 46788999998732 111223345677889999999999999999999999999
Q ss_pred eEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCCEEEeccCCc
Q 011360 280 HLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVLLNDDMEACISDLGLA 359 (487)
Q Consensus 280 ~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nill~~~~~~kl~DFg~s 359 (487)
.|+||||+++|+|.+++.. ...+++..+..++.|++.||.|| |++||+||||||+||+++.++.+||+|||++
T Consensus 68 ~~lv~e~~~~g~L~~~l~~----~~~~~~~~~~~~~~qi~~~l~~l---H~~~i~HrDlkp~Nili~~~~~~kl~Dfg~~ 140 (312)
T cd05585 68 LYLVLAFINGGELFHHLQR----EGRFDLSRARFYTAELLCALENL---HKFNVIYRDLKPENILLDYQGHIALCDFGLC 140 (312)
T ss_pred EEEEEcCCCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHH---HhCCeEeCCCCHHHeEECCCCcEEEEECccc
Confidence 9999999999999999864 45689999999999999999999 7788999999999999999999999999998
Q ss_pred cccCCCCceeeEeeecccccccCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCccccCCCCccccHHHHHHHHhcCCCC
Q 011360 360 MAIPDGYTRVLISYVLGTMAYIAPEYFQQPELSEKCDIFSFGMLLISLVRGVPSFVFHQNGEEICSPEWLRKVMNSKNPS 439 (487)
Q Consensus 360 ~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DvwslG~~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 439 (487)
........ ......||+.|+|||++.+..++.++|||||||++|+|++|..||... ...+..........
T Consensus 141 ~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~------~~~~~~~~~~~~~~-- 210 (312)
T cd05585 141 KLNMKDDD--KTNTFCGTPEYLAPELLLGHGYTKAVDWWTLGVLLYEMLTGLPPFYDE------NVNEMYRKILQEPL-- 210 (312)
T ss_pred ccCccCCC--ccccccCCcccCCHHHHcCCCCCCccceechhHHHHHHHhCCCCcCCC------CHHHHHHHHHcCCC--
Confidence 75432221 123456999999999999999999999999999999999999999432 22233333332211
Q ss_pred CccCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCChHHH
Q 011360 440 RAIDPRLPGNGYEKKMLHVLKIAYICTLHDPEERPNSQYV 479 (487)
Q Consensus 440 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~~i 479 (487)
. ++. .....+.+++.+||..||++||++..+
T Consensus 211 -~----~~~----~~~~~~~~li~~~L~~dp~~R~~~~~~ 241 (312)
T cd05585 211 -R----FPD----GFDRDAKDLLIGLLSRDPTRRLGYNGA 241 (312)
T ss_pred -C----CCC----cCCHHHHHHHHHHcCCCHHHcCCCCCH
Confidence 1 111 123458899999999999999865333
No 55
>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.8e-41 Score=302.20 Aligned_cols=259 Identities=25% Similarity=0.381 Sum_probs=212.4
Q ss_pred cccccccccccccceeEEEEEecCCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccC-CCCCcccc
Q 011360 192 DCFASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQI-RHRNILPL 270 (487)
Q Consensus 192 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpnIv~l 270 (487)
+.|...++||.|..+.|-++.+ ..+|..+|+|++......... .......+.-.+|+.+++++ .||+|+.+
T Consensus 17 ~~y~pkeilgrgvss~vrRci~-k~t~~e~a~kii~~~at~~~~-------e~~~~~~EaT~~Ev~ILRqv~GHP~II~l 88 (411)
T KOG0599|consen 17 AKYEPKEILGRGVSSVVRRCIH-KETGKEFAVKIIDVTATTESG-------ETPYEMREATRQEISILRQVMGHPYIIDL 88 (411)
T ss_pred hhcChHHHhcccchhhhhhhhh-cccccceeEEEEEecccccCC-------ccHHHHHHHHHHHHHHHHHhcCCCcEEEe
Confidence 3577889999999999999965 568889999998654432211 11223445567899999998 89999999
Q ss_pred ceEEecCCeeEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCC
Q 011360 271 LAHMVRPDCHLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVLLNDDME 350 (487)
Q Consensus 271 ~~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nill~~~~~ 350 (487)
.+++..+..+++|+|.|+.|.|.|+|.. .-.+++...+++++|+..|+.|| |.++||||||||+|||++++.+
T Consensus 89 ~D~yes~sF~FlVFdl~prGELFDyLts----~VtlSEK~tR~iMrqlfegVeyl---Ha~~IVHRDLKpENILlddn~~ 161 (411)
T KOG0599|consen 89 QDVYESDAFVFLVFDLMPRGELFDYLTS----KVTLSEKETRRIMRQLFEGVEYL---HARNIVHRDLKPENILLDDNMN 161 (411)
T ss_pred eeeccCcchhhhhhhhcccchHHHHhhh----heeecHHHHHHHHHHHHHHHHHH---HHhhhhhcccChhheeeccccc
Confidence 9999999999999999999999999975 56789999999999999999999 7888999999999999999999
Q ss_pred EEEeccCCccccCCCCceeeEeeecccccccCCcccC------CCCCCchhHHHHHHHHHHHHHhCCCCccccCCCCccc
Q 011360 351 ACISDLGLAMAIPDGYTRVLISYVLGTMAYIAPEYFQ------QPELSEKCDIFSFGMLLISLVRGVPSFVFHQNGEEIC 424 (487)
Q Consensus 351 ~kl~DFg~s~~~~~~~~~~~~~~~~gt~~y~aPE~l~------~~~~~~~~DvwslG~~l~elltg~~pf~~~~~~~~~~ 424 (487)
+||+|||+++.+..+... ...+|||+|+|||.+. .+.|+..+|+||+|+++|.|+.|.+||-..
T Consensus 162 i~isDFGFa~~l~~GekL---relCGTPgYLAPEtikC~m~e~~pGYs~EVD~Wa~GVImyTLLaGcpPFwHR------- 231 (411)
T KOG0599|consen 162 IKISDFGFACQLEPGEKL---RELCGTPGYLAPETIKCSMYENHPGYSKEVDEWACGVIMYTLLAGCPPFWHR------- 231 (411)
T ss_pred eEEeccceeeccCCchhH---HHhcCCCcccChhheeeecccCCCCccchhhHHHHHHHHHHHHcCCCchhHH-------
Confidence 999999999998877543 5678999999999885 457899999999999999999999999211
Q ss_pred cHHHHHHHHhcCCCCCccCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCChHHHHH
Q 011360 425 SPEWLRKVMNSKNPSRAIDPRLPGNGYEKKMLHVLKIAYICTLHDPEERPNSQYVRC 481 (487)
Q Consensus 425 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~~il~ 481 (487)
..-.+.+++..+... +.+....+++....++|.+||+.||.+|.|+++.++
T Consensus 232 kQmlMLR~ImeGkyq------F~speWadis~~~KdLIsrlLqVdp~~Ritake~La 282 (411)
T KOG0599|consen 232 KQMLMLRMIMEGKYQ------FRSPEWADISATVKDLISRLLQVDPTKRITAKEALA 282 (411)
T ss_pred HHHHHHHHHHhcccc------cCCcchhhccccHHHHHHHHHeeCchhcccHHHHhc
Confidence 111222333344332 334455667788999999999999999999999875
No 56
>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-
Probab=100.00 E-value=3.6e-40 Score=332.00 Aligned_cols=269 Identities=24% Similarity=0.306 Sum_probs=207.1
Q ss_pred HhhhccccccccccccccceeEEEEEecC----CCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccC
Q 011360 187 FLKKEDCFASLEKIGSGGCGEVYKAELPG----SNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQI 262 (487)
Q Consensus 187 ~~~~~~~~~~~~~lg~G~~g~v~~~~~~~----~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l 262 (487)
|....+.|.+.+.||.|+||.||+|++.. .++..||||++... ........+.+|+.++.++
T Consensus 32 ~~~~~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~--------------~~~~~~~~~~~Ei~~l~~l 97 (400)
T cd05105 32 WEFPRDGLVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPT--------------ARSSEKQALMSELKIMTHL 97 (400)
T ss_pred eeccccceehhheecCCCCceEEEEEEcccCCCCCceEEEEEecCCC--------------CChHHHHHHHHHHHHHHhc
Confidence 44456679999999999999999997532 23457999987431 1222345788999999999
Q ss_pred C-CCCccccceEEecCCeeEEEEEecCCCCHHHHHhhhhc----------------------------------------
Q 011360 263 R-HRNILPLLAHMVRPDCHLLVYEFMKNGSLQDILDDVSR---------------------------------------- 301 (487)
Q Consensus 263 ~-hpnIv~l~~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~---------------------------------------- 301 (487)
. ||||+++++++...+..|+|||||++|+|.+++.....
T Consensus 98 ~~HpnIv~l~~~~~~~~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (400)
T cd05105 98 GPHLNIVNLLGACTKSGPIYIITEYCFYGDLVNYLHKNRDNFLSRHPEKPKKDLDIFGINPADESTRSYVILSFENKGDY 177 (400)
T ss_pred CCCCCeeeEEEEEccCCceEEEEEecCCCcHHHHHHHhhhhhhccccccccccccccCCCcccccccchhhhhhcccccc
Confidence 5 99999999999999999999999999999999864210
Q ss_pred ----------------------------------------------------CCCCCChHHHHHHHHHHHHHHHHHHhcC
Q 011360 302 ----------------------------------------------------GRRELDWPSRHRIALGVASGLEYLHMYH 329 (487)
Q Consensus 302 ----------------------------------------------------~~~~l~~~~~~~i~~qi~~~L~~Lh~~h 329 (487)
....+++..+..++.|++.||.|| |
T Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~L---H 254 (400)
T cd05105 178 MDMKQADTTQYVPMLEIKEASKYSDIQRSNYDRPASYKGSNDSEVKNLLSDDGSEGLTTLDLLSFTYQVARGMEFL---A 254 (400)
T ss_pred cccccccccccchhhhhhhhhhhhhcccCcccccccccCcchhhHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHH---H
Confidence 123478888899999999999999 7
Q ss_pred CCCeeecCCCCCCEEeCCCCCEEEeccCCccccCCCCceeeEeeecccccccCCcccCCCCCCchhHHHHHHHHHHHHHh
Q 011360 330 SASIIHGDIKPRNVLLNDDMEACISDLGLAMAIPDGYTRVLISYVLGTMAYIAPEYFQQPELSEKCDIFSFGMLLISLVR 409 (487)
Q Consensus 330 ~~givH~Dlkp~Nill~~~~~~kl~DFg~s~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DvwslG~~l~ellt 409 (487)
+.||+||||||+||+++.++.+||+|||+++...............+++.|+|||.+.+..++.++||||||+++|+|++
T Consensus 255 ~~~ivH~dikp~Nill~~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt 334 (400)
T cd05105 255 SKNCVHRDLAARNVLLAQGKIVKICDFGLARDIMHDSNYVSKGSTFLPVKWMAPESIFDNLYTTLSDVWSYGILLWEIFS 334 (400)
T ss_pred hCCeeCCCCChHhEEEeCCCEEEEEeCCcceeccccccccccCCcCCCcceEChhhhcCCCCCchhhHHHHHHHHHHHHH
Confidence 78899999999999999999999999999976543322222223446788999999998899999999999999999997
Q ss_pred -CCCCccccCCCCccccHHHHHHHHhcCCCCCccCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCChHHHHHHHhhhC
Q 011360 410 -GVPSFVFHQNGEEICSPEWLRKVMNSKNPSRAIDPRLPGNGYEKKMLHVLKIAYICTLHDPEERPNSQYVRCRLSQLL 487 (487)
Q Consensus 410 -g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~~il~~L~~ll 487 (487)
|..||...... ............ .. .+ ...+..+.+++.+||+.+|++|||+.+|.+.|++++
T Consensus 335 ~g~~P~~~~~~~------~~~~~~~~~~~~-~~----~~----~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~l~~l~ 398 (400)
T cd05105 335 LGGTPYPGMIVD------STFYNKIKSGYR-MA----KP----DHATQEVYDIMVKCWNSEPEKRPSFLHLSDIVESLL 398 (400)
T ss_pred CCCCCCcccchh------HHHHHHHhcCCC-CC----CC----ccCCHHHHHHHHHHCccCHhHCcCHHHHHHHHHHHc
Confidence 88998433211 111112222111 01 11 122356889999999999999999999999998864
No 57
>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer
Probab=100.00 E-value=7e-40 Score=316.19 Aligned_cols=261 Identities=27% Similarity=0.425 Sum_probs=205.1
Q ss_pred ccccccccccccceeEEEEEecCC----CCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCCCCcc
Q 011360 193 CFASLEKIGSGGCGEVYKAELPGS----NGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQIRHRNIL 268 (487)
Q Consensus 193 ~~~~~~~lg~G~~g~v~~~~~~~~----~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv 268 (487)
+|.+.+.||+|+||.||+|..... ....||+|.+.. .........+.+|+.++..++||||+
T Consensus 6 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~--------------~~~~~~~~~~~~ei~~l~~l~h~~i~ 71 (283)
T cd05048 6 AVRFLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKE--------------NAEPKVQQEFRQEAELMSDLQHPNIV 71 (283)
T ss_pred HcchhhcccCccCCcEEEEEEecCCCCcceeeEEEEeccc--------------CCCHHHHHHHHHHHHHHHhcCCcccc
Confidence 588999999999999999976422 236799998732 11223345678899999999999999
Q ss_pred ccceEEecCCeeEEEEEecCCCCHHHHHhhhhcC------------CCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeec
Q 011360 269 PLLAHMVRPDCHLLVYEFMKNGSLQDILDDVSRG------------RRELDWPSRHRIALGVASGLEYLHMYHSASIIHG 336 (487)
Q Consensus 269 ~l~~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~------------~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~ 336 (487)
++++++......+++|||+++++|.+++...... ...+++..+..++.|++.||.|| |++|++||
T Consensus 72 ~~~~~~~~~~~~~~~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~l---H~~~i~H~ 148 (283)
T cd05048 72 CLLGVCTKEQPTCMLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYL---SSHHFVHR 148 (283)
T ss_pred eEEEEEcCCCceEEEEecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHH---HhCCeecc
Confidence 9999999999999999999999999999753211 14578889999999999999999 77889999
Q ss_pred CCCCCCEEeCCCCCEEEeccCCccccCCCCceeeEeeecccccccCCcccCCCCCCchhHHHHHHHHHHHHHh-CCCCcc
Q 011360 337 DIKPRNVLLNDDMEACISDLGLAMAIPDGYTRVLISYVLGTMAYIAPEYFQQPELSEKCDIFSFGMLLISLVR-GVPSFV 415 (487)
Q Consensus 337 Dlkp~Nill~~~~~~kl~DFg~s~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DvwslG~~l~ellt-g~~pf~ 415 (487)
||||+||++++++.++|+|||++................+++.|+|||.+.+..++.++|||||||++|||++ |..||.
T Consensus 149 dlkp~Nil~~~~~~~~L~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~il~el~~~g~~p~~ 228 (283)
T cd05048 149 DLAARNCLVGEGLTVKISDFGLSRDIYSADYYRVQSKSLLPVRWMPPEAILYGKFTTESDIWSFGVVLWEIFSYGLQPYY 228 (283)
T ss_pred ccccceEEEcCCCcEEECCCcceeeccccccccccCCCcccccccCHHHhccCcCchhhhHHHHHHHHHHHHcCCCCCCC
Confidence 9999999999999999999999976543322222233456889999999988899999999999999999998 999995
Q ss_pred ccCCCCccccHHHHHHHHhcCCCCCccCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCChHHHHHHHhhh
Q 011360 416 FHQNGEEICSPEWLRKVMNSKNPSRAIDPRLPGNGYEKKMLHVLKIAYICTLHDPEERPNSQYVRCRLSQL 486 (487)
Q Consensus 416 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~~il~~L~~l 486 (487)
.... .+... .+....... .. ...+.++.+++.+||+.||.+|||+.+|++.|+++
T Consensus 229 ~~~~------~~~~~-~i~~~~~~~-~~--------~~~~~~~~~l~~~c~~~~p~~Rp~~~~i~~~l~~~ 283 (283)
T cd05048 229 GFSN------QEVIE-MIRSRQLLP-CP--------EDCPARVYALMIECWNEIPARRPRFKDIHTRLRSW 283 (283)
T ss_pred CCCH------HHHHH-HHHcCCcCC-Cc--------ccCCHHHHHHHHHHccCChhhCcCHHHHHHHHhcC
Confidence 4322 12222 222222111 11 12336699999999999999999999999999864
No 58
>PHA03212 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=4.9e-40 Score=330.75 Aligned_cols=260 Identities=20% Similarity=0.264 Sum_probs=196.3
Q ss_pred ccccccccccccccceeEEEEEecCCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCCCCcccc
Q 011360 191 EDCFASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQIRHRNILPL 270 (487)
Q Consensus 191 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l 270 (487)
...|.+.+.||.|+||.||++. +..+++.||+|... ...+.+|+.+++.++||||+++
T Consensus 91 ~~~y~~~~~lg~G~~g~V~~~~-d~~~~~~vaiK~~~---------------------~~~~~~E~~il~~l~HpnIv~~ 148 (391)
T PHA03212 91 KAGFSILETFTPGAEGFAFACI-DNKTCEHVVIKAGQ---------------------RGGTATEAHILRAINHPSIIQL 148 (391)
T ss_pred cCCcEEEEEEcCCCCeEEEEEE-ECCCCCEEEEechh---------------------hhhhHHHHHHHHhCCCCCCCCE
Confidence 3569999999999999999996 45688999999641 1245689999999999999999
Q ss_pred ceEEecCCeeEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCC
Q 011360 271 LAHMVRPDCHLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVLLNDDME 350 (487)
Q Consensus 271 ~~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nill~~~~~ 350 (487)
++++......++|||++ +++|..++.. ...+++..++.++.|++.||.|| |++||+||||||+||+++.++.
T Consensus 149 ~~~~~~~~~~~lv~e~~-~~~L~~~l~~----~~~l~~~~~~~i~~qi~~aL~yl---H~~~IvHrDiKP~NIll~~~~~ 220 (391)
T PHA03212 149 KGTFTYNKFTCLILPRY-KTDLYCYLAA----KRNIAICDILAIERSVLRAIQYL---HENRIIHRDIKAENIFINHPGD 220 (391)
T ss_pred eEEEEECCeeEEEEecC-CCCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHH---HhCCcccCCCChHhEEEcCCCC
Confidence 99999999999999999 5688888764 35688999999999999999999 7778999999999999999999
Q ss_pred EEEeccCCccccCCCCceeeEeeecccccccCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCccccCCCCcccc-HHHH
Q 011360 351 ACISDLGLAMAIPDGYTRVLISYVLGTMAYIAPEYFQQPELSEKCDIFSFGMLLISLVRGVPSFVFHQNGEEICS-PEWL 429 (487)
Q Consensus 351 ~kl~DFg~s~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DvwslG~~l~elltg~~pf~~~~~~~~~~~-~~~~ 429 (487)
+||+|||++......... ......||+.|+|||++.+..++.++|||||||++|||+||..||.........+. ...+
T Consensus 221 vkL~DFG~a~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~p~~~~~~~~~~~~~~~~l 299 (391)
T PHA03212 221 VCLGDFGAACFPVDINAN-KYYGWAGTIATNAPELLARDPYGPAVDIWSAGIVLFEMATCHDSLFEKDGLDGDCDSDRQI 299 (391)
T ss_pred EEEEeCCccccccccccc-ccccccCccCCCChhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCcCCcccccccCchhHHH
Confidence 999999998654322111 12345699999999999998999999999999999999999887744322111110 0011
Q ss_pred HHHHh--cCCCCCc--------------------cCC-CCCC-CCcHHHHHHHHHHHhhccCCCCCCCCChHHHHH
Q 011360 430 RKVMN--SKNPSRA--------------------IDP-RLPG-NGYEKKMLHVLKIAYICTLHDPEERPNSQYVRC 481 (487)
Q Consensus 430 ~~~~~--~~~~~~~--------------------~~~-~~~~-~~~~~~~~~l~~li~~cl~~~P~~RPs~~~il~ 481 (487)
..+.. +..+... ..+ ..+. ......+.++.+++.+||+.||++|||++++++
T Consensus 300 ~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Li~~mL~~dP~~Rpta~elL~ 375 (391)
T PHA03212 300 KLIIRRSGTHPNEFPIDAQANLDEIYIGLAKKSSRKPGSRPLWTNLYELPIDLEYLICKMLAFDAHHRPSAEALLD 375 (391)
T ss_pred HHHHHHhcCChhhcCcchhHHHHHHHHHHHhccCCCCCCCCCHHHHhhhhhhHHHHHHHHhcCChhhCCCHHHHhc
Confidence 11110 0000000 000 0000 011134557889999999999999999999985
No 59
>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=8.3e-41 Score=326.68 Aligned_cols=262 Identities=21% Similarity=0.333 Sum_probs=212.9
Q ss_pred HhhhccccccccccccccceeEEEEEecCCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCCCC
Q 011360 187 FLKKEDCFASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQIRHRN 266 (487)
Q Consensus 187 ~~~~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpn 266 (487)
|.....++....+||.|.||.||.|.|++ -.-.||||.+ ......++.|+.|+.+|+.++|||
T Consensus 262 WEmeRtdItMkhKLGGGQYGeVYeGvWKk-yslTvAVKtL----------------KEDtMeveEFLkEAAvMKeikHpN 324 (1157)
T KOG4278|consen 262 WEMERTDITMKHKLGGGQYGEVYEGVWKK-YSLTVAVKTL----------------KEDTMEVEEFLKEAAVMKEIKHPN 324 (1157)
T ss_pred hhccchheeeeeccCCCcccceeeeeeec-cceeeehhhh----------------hhcchhHHHHHHHHHHHHhhcCcc
Confidence 44445567888999999999999999875 4567999977 334567889999999999999999
Q ss_pred ccccceEEecCCeeEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeC
Q 011360 267 ILPLLAHMVRPDCHLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVLLN 346 (487)
Q Consensus 267 Iv~l~~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nill~ 346 (487)
+|+++|+|..+.+.|||+|||..|+|.+||.. -+...++....+.++.||.+|+.|| ..+++|||||.++|||+.
T Consensus 325 LVqLLGVCT~EpPFYIiTEfM~yGNLLdYLRe--cnr~ev~avvLlyMAtQIsSaMeYL---EkknFIHRDLAARNCLVg 399 (1157)
T KOG4278|consen 325 LVQLLGVCTHEPPFYIITEFMCYGNLLDYLRE--CNRSEVPAVVLLYMATQISSAMEYL---EKKNFIHRDLAARNCLVG 399 (1157)
T ss_pred HHHHhhhhccCCCeEEEEecccCccHHHHHHH--hchhhcchhHHHHHHHHHHHHHHHH---HHhhhhhhhhhhhhcccc
Confidence 99999999999999999999999999999986 3455677778899999999999999 666699999999999999
Q ss_pred CCCCEEEeccCCccccCCCCceeeEeeecccccccCCcccCCCCCCchhHHHHHHHHHHHHHh-CCCCccccCCCCcccc
Q 011360 347 DDMEACISDLGLAMAIPDGYTRVLISYVLGTMAYIAPEYFQQPELSEKCDIFSFGMLLISLVR-GVPSFVFHQNGEEICS 425 (487)
Q Consensus 347 ~~~~~kl~DFg~s~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DvwslG~~l~ellt-g~~pf~~~~~~~~~~~ 425 (487)
++..+|++|||+++.+....... ......++.|.|||.|....++.|+|||+||++|||+.| |..||.+-+ .
T Consensus 400 EnhiVKvADFGLsRlMtgDTYTA-HAGAKFPIKWTAPEsLAyNtFSiKSDVWAFGVLLWEIATYGMsPYPGid------l 472 (1157)
T KOG4278|consen 400 ENHIVKVADFGLSRLMTGDTYTA-HAGAKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSPYPGID------L 472 (1157)
T ss_pred ccceEEeeccchhhhhcCCceec-ccCccCcccccCcccccccccccchhhHHHHHHHHHHHhcCCCCCCCcc------H
Confidence 99999999999999886553322 122335789999999999999999999999999999999 899994332 2
Q ss_pred HHHHHHHHhcCCCCCccCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCChHHHHHHHhhhC
Q 011360 426 PEWLRKVMNSKNPSRAIDPRLPGNGYEKKMLHVLKIAYICTLHDPEERPNSQYVRCRLSQLL 487 (487)
Q Consensus 426 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~~il~~L~~ll 487 (487)
.. +..++..+ .+-.-++.+| ..+++||..||+++|++||++.+|-+.++.++
T Consensus 473 Sq-VY~LLEkg-yRM~~PeGCP--------pkVYeLMraCW~WsPsDRPsFaeiHqafEtmf 524 (1157)
T KOG4278|consen 473 SQ-VYGLLEKG-YRMDGPEGCP--------PKVYELMRACWNWSPSDRPSFAEIHQAFETMF 524 (1157)
T ss_pred HH-HHHHHhcc-ccccCCCCCC--------HHHHHHHHHHhcCCcccCccHHHHHHHHHHHh
Confidence 22 22222211 1111122233 45999999999999999999999999998763
No 60
>PTZ00283 serine/threonine protein kinase; Provisional
Probab=100.00 E-value=4.2e-40 Score=340.35 Aligned_cols=257 Identities=22% Similarity=0.300 Sum_probs=204.6
Q ss_pred cccccccccccccceeEEEEEecCCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCCCCccccc
Q 011360 192 DCFASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQIRHRNILPLL 271 (487)
Q Consensus 192 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~ 271 (487)
++|.+.+.||.|+||.||+|.. ..+++.||||.+... .........+.+|+..+..++|+||++++
T Consensus 32 ~rY~i~~~LG~G~fG~Vy~a~~-~~~g~~vAvK~i~~~-------------~~~~~~~~~~~~Ei~~l~~~~h~~iv~~~ 97 (496)
T PTZ00283 32 KKYWISRVLGSGATGTVLCAKR-VSDGEPFAVKVVDME-------------GMSEADKNRAQAEVCCLLNCDFFSIVKCH 97 (496)
T ss_pred CCEEEEEEEecCCCEEEEEEEE-cCCCCEEEEEEEecc-------------cCCHHHHHHHHHHHHHHhcCCCCcEEEee
Confidence 4799999999999999999974 457899999988431 11233455678899999999999999998
Q ss_pred eEEecCC--------eeEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCE
Q 011360 272 AHMVRPD--------CHLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNV 343 (487)
Q Consensus 272 ~~~~~~~--------~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Ni 343 (487)
..+...+ .+++||||+++|+|.+++.........+++..+..++.|++.||.|| |++||+||||||+||
T Consensus 98 ~~~~~~~~~~~~~~~~i~lV~Ey~~~gsL~~~l~~~~~~~~~l~e~~~~~i~~qll~aL~~l---H~~~IiHrDLKP~NI 174 (496)
T PTZ00283 98 EDFAKKDPRNPENVLMIALVLDYANAGDLRQEIKSRAKTNRTFREHEAGLLFIQVLLAVHHV---HSKHMIHRDIKSANI 174 (496)
T ss_pred cceecccccCcccceEEEEEEeCCCCCcHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHH---HhCCEecCCCCHHHE
Confidence 7765432 36899999999999999976544556789999999999999999999 778899999999999
Q ss_pred EeCCCCCEEEeccCCccccCCCCceeeEeeecccccccCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCccccCCCCcc
Q 011360 344 LLNDDMEACISDLGLAMAIPDGYTRVLISYVLGTMAYIAPEYFQQPELSEKCDIFSFGMLLISLVRGVPSFVFHQNGEEI 423 (487)
Q Consensus 344 ll~~~~~~kl~DFg~s~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DvwslG~~l~elltg~~pf~~~~~~~~~ 423 (487)
|++.++.+||+|||+++...............||+.|+|||++.+..++.++|||||||++|||++|..||...
T Consensus 175 Ll~~~~~vkL~DFGls~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~s~k~DVwSlGvilyeLltG~~Pf~~~------ 248 (496)
T PTZ00283 175 LLCSNGLVKLGDFGFSKMYAATVSDDVGRTFCGTPYYVAPEIWRRKPYSKKADMFSLGVLLYELLTLKRPFDGE------ 248 (496)
T ss_pred EEeCCCCEEEEecccCeeccccccccccccccCCcceeCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCC------
Confidence 99999999999999998764433222234567999999999999999999999999999999999999999432
Q ss_pred ccHHHHHHHHhcCCCCCccCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCChHHHHH
Q 011360 424 CSPEWLRKVMNSKNPSRAIDPRLPGNGYEKKMLHVLKIAYICTLHDPEERPNSQYVRC 481 (487)
Q Consensus 424 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~~il~ 481 (487)
...+........... .+++. .+.++.+++.+||+.+|++|||+.+++.
T Consensus 249 ~~~~~~~~~~~~~~~--~~~~~--------~~~~l~~li~~~L~~dP~~RPs~~ell~ 296 (496)
T PTZ00283 249 NMEEVMHKTLAGRYD--PLPPS--------ISPEMQEIVTALLSSDPKRRPSSSKLLN 296 (496)
T ss_pred CHHHHHHHHhcCCCC--CCCCC--------CCHHHHHHHHHHcccChhhCcCHHHHHh
Confidence 222333333322211 11122 2356889999999999999999999875
No 61
>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1. Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst
Probab=100.00 E-value=9.7e-40 Score=322.62 Aligned_cols=201 Identities=25% Similarity=0.422 Sum_probs=172.5
Q ss_pred ccccccccccccccceeEEEEEecCCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCCCCcccc
Q 011360 191 EDCFASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQIRHRNILPL 270 (487)
Q Consensus 191 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l 270 (487)
.++|++.+.||.|+||.||++.. ..++..+|+|.+.. .........+.+|+.++..++||||+++
T Consensus 4 ~~~y~~~~~lg~g~~g~V~~~~~-~~~~~~~a~k~~~~--------------~~~~~~~~~~~~E~~~l~~l~h~~iv~~ 68 (333)
T cd06650 4 DDDFEKISELGAGNGGVVFKVSH-KPSGLIMARKLIHL--------------EIKPAIRNQIIRELQVLHECNSPYIVGF 68 (333)
T ss_pred hhhhheeccccCCCCEEEEEEEE-CCCCcEEEEEEeec--------------ccCHHHHHHHHHHHHHHHHCCCCcccce
Confidence 45799999999999999999975 45788899998732 1122344568899999999999999999
Q ss_pred ceEEecCCeeEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCC
Q 011360 271 LAHMVRPDCHLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVLLNDDME 350 (487)
Q Consensus 271 ~~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nill~~~~~ 350 (487)
++++...+..++||||+++|+|.+++.. ...+++..+..++.|++.||.|||+ ..+++||||||+|||++.++.
T Consensus 69 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~----~~~~~~~~~~~~~~~l~~~l~~lH~--~~~ivH~dlkp~Nili~~~~~ 142 (333)
T cd06650 69 YGAFYSDGEISICMEHMDGGSLDQVLKK----AGRIPEQILGKVSIAVIKGLTYLRE--KHKIMHRDVKPSNILVNSRGE 142 (333)
T ss_pred eEEEEECCEEEEEEecCCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHh--cCCEEecCCChhhEEEcCCCC
Confidence 9999999999999999999999999864 3568889999999999999999952 347999999999999999999
Q ss_pred EEEeccCCccccCCCCceeeEeeecccccccCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCccc
Q 011360 351 ACISDLGLAMAIPDGYTRVLISYVLGTMAYIAPEYFQQPELSEKCDIFSFGMLLISLVRGVPSFVF 416 (487)
Q Consensus 351 ~kl~DFg~s~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DvwslG~~l~elltg~~pf~~ 416 (487)
+||+|||++........ ....|+..|+|||++.+..++.++|||||||++|+|++|..||..
T Consensus 143 ~kL~Dfg~~~~~~~~~~----~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~ 204 (333)
T cd06650 143 IKLCDFGVSGQLIDSMA----NSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAIGRYPIPP 204 (333)
T ss_pred EEEeeCCcchhhhhhcc----ccCCCCccccCHHHhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCC
Confidence 99999999876533221 234689999999999988999999999999999999999999954
No 62
>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase
Probab=100.00 E-value=1.2e-39 Score=311.76 Aligned_cols=264 Identities=25% Similarity=0.363 Sum_probs=210.1
Q ss_pred cccccccccccccceeEEEEEecCCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCCCCccccc
Q 011360 192 DCFASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQIRHRNILPLL 271 (487)
Q Consensus 192 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~ 271 (487)
++|.+.+.||.|+||.||+|+.. .++..||||.+.... .........+.+|+.+++.++||||++++
T Consensus 2 ~~~~i~~~l~~g~~~~v~~~~~~-~~~~~~~iK~~~~~~------------~~~~~~~~~~~~e~~~l~~l~h~~i~~~~ 68 (267)
T cd08228 2 ANFQIEKKIGRGQFSEVYRATCL-LDRKPVALKKVQIFE------------MMDAKARQDCVKEIDLLKQLNHPNVIKYL 68 (267)
T ss_pred cceeeeeeeccCCCeeEEEEEEe-CCCCEEEEEEeeccc------------cCCHHHHHHHHHHHHHHHhCCCcceeeee
Confidence 35899999999999999999753 578899999874311 11223445678899999999999999999
Q ss_pred eEEecCCeeEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCCE
Q 011360 272 AHMVRPDCHLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVLLNDDMEA 351 (487)
Q Consensus 272 ~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nill~~~~~~ 351 (487)
+++...+..+++|||+++|+|.+++.........+++..+..++.|++.||.|| |++|++|+||+|+||+++.++.+
T Consensus 69 ~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~L---H~~~i~H~dl~~~nil~~~~~~~ 145 (267)
T cd08228 69 DSFIEDNELNIVLELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHM---HSRRVMHRDIKPANVFITATGVV 145 (267)
T ss_pred eeEEECCeEEEEEEecCCCcHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHH---hhCCeeCCCCCHHHEEEcCCCCE
Confidence 999999999999999999999999876555556788999999999999999999 78899999999999999999999
Q ss_pred EEeccCCccccCCCCceeeEeeecccccccCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCccccCCCCccccHHHHHH
Q 011360 352 CISDLGLAMAIPDGYTRVLISYVLGTMAYIAPEYFQQPELSEKCDIFSFGMLLISLVRGVPSFVFHQNGEEICSPEWLRK 431 (487)
Q Consensus 352 kl~DFg~s~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DvwslG~~l~elltg~~pf~~~~~~~~~~~~~~~~~ 431 (487)
+|+|||++......... .....+++.|+|||.+.+..++.++|+||||+++|+|++|..||..... ........
T Consensus 146 ~l~d~g~~~~~~~~~~~--~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~p~~~~~~----~~~~~~~~ 219 (267)
T cd08228 146 KLGDLGLGRFFSSKTTA--AHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKM----NLFSLCQK 219 (267)
T ss_pred EECccccceeccchhHH--HhcCCCCccccChhhhccCCCCchhhHHHHHHHHHHHhcCCCCCccccc----cHHHHHHH
Confidence 99999998765443221 1234588899999999888899999999999999999999999843221 11222222
Q ss_pred HHhcCCCCCccCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCChHHHHHHHhhh
Q 011360 432 VMNSKNPSRAIDPRLPGNGYEKKMLHVLKIAYICTLHDPEERPNSQYVRCRLSQL 486 (487)
Q Consensus 432 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~~il~~L~~l 486 (487)
......+ ..........+.+++.+||..+|++|||+.++++.|+++
T Consensus 220 ~~~~~~~---------~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~vl~~~~~~ 265 (267)
T cd08228 220 IEQCDYP---------PLPTEHYSEKLRELVSMCIYPDPDQRPDIGYVHQIAKQM 265 (267)
T ss_pred HhcCCCC---------CCChhhcCHHHHHHHHHHCCCCcccCcCHHHHHHHHHHh
Confidence 2211111 111123346689999999999999999999999999875
No 63
>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in
Probab=100.00 E-value=4.3e-40 Score=323.84 Aligned_cols=245 Identities=21% Similarity=0.282 Sum_probs=194.5
Q ss_pred cccccccceeEEEEEecCCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCCCCccccceEEecC
Q 011360 198 EKIGSGGCGEVYKAELPGSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQIRHRNILPLLAHMVRP 277 (487)
Q Consensus 198 ~~lg~G~~g~v~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~ 277 (487)
+.||+|+||.||++.. ..+|..||+|++... ..........+.+|+.++..++||||+++++++...
T Consensus 1 ~~lG~G~~g~Vy~~~~-~~~~~~vaiK~~~~~------------~~~~~~~~~~~~~E~~~l~~l~hp~i~~~~~~~~~~ 67 (323)
T cd05595 1 KLLGKGTFGKVILVRE-KATGRYYAMKILRKE------------VIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTH 67 (323)
T ss_pred CeeeeCCCEEEEEEEE-CCCCCEEEEEEEEHH------------HhhhhHHHHHHHHHHHHHHhCCCCCCcceeeEEecC
Confidence 4689999999999974 467899999988421 111223455677899999999999999999999999
Q ss_pred CeeEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCCEEEeccC
Q 011360 278 DCHLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVLLNDDMEACISDLG 357 (487)
Q Consensus 278 ~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nill~~~~~~kl~DFg 357 (487)
+..|+||||+++|+|..++.. ...+++..+..++.|++.||.|| |++||+||||||+|||++.++.+||+|||
T Consensus 68 ~~~~lv~E~~~~~~L~~~l~~----~~~~~~~~~~~~~~qi~~aL~~L---H~~~ivH~Dlkp~NIll~~~~~~kL~Dfg 140 (323)
T cd05595 68 DRLCFVMEYANGGELFFHLSR----ERVFTEERARFYGAEIVSALEYL---HSRDVVYRDIKLENLMLDKDGHIKITDFG 140 (323)
T ss_pred CEEEEEEeCCCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHH---HHCCeEecCCCHHHEEEcCCCCEEecccH
Confidence 999999999999999988864 45689999999999999999999 77889999999999999999999999999
Q ss_pred CccccCCCCceeeEeeecccccccCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCccccCCCCccccHHHHHHHHhcCC
Q 011360 358 LAMAIPDGYTRVLISYVLGTMAYIAPEYFQQPELSEKCDIFSFGMLLISLVRGVPSFVFHQNGEEICSPEWLRKVMNSKN 437 (487)
Q Consensus 358 ~s~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DvwslG~~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~ 437 (487)
++........ ......||+.|+|||++.+..++.++|||||||++|+|++|..||...+. ...........
T Consensus 141 ~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~------~~~~~~~~~~~- 211 (323)
T cd05595 141 LCKEGISDGA--TMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH------ERLFELILMEE- 211 (323)
T ss_pred HhccccCCCC--ccccccCCcCcCCcccccCCCCCchhchhhhHHHHHHHHhCCCCCCCCCH------HHHHHHHhcCC-
Confidence 9875322211 11345689999999999998999999999999999999999999943321 11222222111
Q ss_pred CCCccCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCC-----ChHHHHH
Q 011360 438 PSRAIDPRLPGNGYEKKMLHVLKIAYICTLHDPEERP-----NSQYVRC 481 (487)
Q Consensus 438 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RP-----s~~~il~ 481 (487)
. .++.. .+.++.+++.+||..||++|| ++.++++
T Consensus 212 ~------~~p~~----~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~l~ 250 (323)
T cd05595 212 I------RFPRT----LSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVME 250 (323)
T ss_pred C------CCCCC----CCHHHHHHHHHHccCCHHHhCCCCCCCHHHHHc
Confidence 1 11111 235688999999999999998 7877764
No 64
>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly
Probab=100.00 E-value=8.9e-40 Score=316.45 Aligned_cols=261 Identities=21% Similarity=0.343 Sum_probs=205.1
Q ss_pred cccccccccccccceeEEEEEec----CCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCCCCc
Q 011360 192 DCFASLEKIGSGGCGEVYKAELP----GSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQIRHRNI 267 (487)
Q Consensus 192 ~~~~~~~~lg~G~~g~v~~~~~~----~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnI 267 (487)
++|.+.+.||.|+||+||++... ..++..+|+|.+.. ........+.+|+.++.+++||||
T Consensus 5 ~~~~~~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~---------------~~~~~~~~~~~e~~~l~~l~h~~i 69 (288)
T cd05093 5 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKD---------------ASDNARKDFHREAELLTNLQHEHI 69 (288)
T ss_pred HHeeeccccCCcCCeeEEeeEeccCCCCCcceEEEEEecCC---------------cCHHHHHHHHHHHHHHHhCCCCCc
Confidence 45899999999999999999742 23456789997732 122345568889999999999999
Q ss_pred cccceEEecCCeeEEEEEecCCCCHHHHHhhhhc---------CCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCC
Q 011360 268 LPLLAHMVRPDCHLLVYEFMKNGSLQDILDDVSR---------GRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDI 338 (487)
Q Consensus 268 v~l~~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~---------~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dl 338 (487)
+++++++...+..++||||+++++|.+++..... ....+++..+..++.|++.||+|| |++|++||||
T Consensus 70 ~~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~l---H~~~i~H~dl 146 (288)
T cd05093 70 VKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYL---ASQHFVHRDL 146 (288)
T ss_pred ceEEEEEecCCccEEEEEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHH---HhCCeeeccc
Confidence 9999999999999999999999999999875321 123589999999999999999999 7788999999
Q ss_pred CCCCEEeCCCCCEEEeccCCccccCCCCceeeEeeecccccccCCcccCCCCCCchhHHHHHHHHHHHHHh-CCCCcccc
Q 011360 339 KPRNVLLNDDMEACISDLGLAMAIPDGYTRVLISYVLGTMAYIAPEYFQQPELSEKCDIFSFGMLLISLVR-GVPSFVFH 417 (487)
Q Consensus 339 kp~Nill~~~~~~kl~DFg~s~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DvwslG~~l~ellt-g~~pf~~~ 417 (487)
||+||++++++.++|+|||++................+++.|+|||++.+..++.++||||||+++|+|++ |.+||...
T Consensus 147 kp~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il~~l~t~g~~p~~~~ 226 (288)
T cd05093 147 ATRNCLVGENLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQL 226 (288)
T ss_pred CcceEEEccCCcEEeccCCccccccCCceeecCCCCCccccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCC
Confidence 99999999999999999999976543322222223345778999999998899999999999999999998 89998433
Q ss_pred CCCCccccHHHHHHHHhcCCCCCccCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCChHHHHHHHhhh
Q 011360 418 QNGEEICSPEWLRKVMNSKNPSRAIDPRLPGNGYEKKMLHVLKIAYICTLHDPEERPNSQYVRCRLSQL 486 (487)
Q Consensus 418 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~~il~~L~~l 486 (487)
.. .+........ .... .+.. .+..+.+++.+||+.+|.+|||++++.+.|+++
T Consensus 227 ~~------~~~~~~i~~~-~~~~-----~~~~----~~~~l~~li~~~l~~~p~~Rpt~~~v~~~l~~~ 279 (288)
T cd05093 227 SN------NEVIECITQG-RVLQ-----RPRT----CPKEVYDLMLGCWQREPHMRLNIKEIHSLLQNL 279 (288)
T ss_pred CH------HHHHHHHHcC-CcCC-----CCCC----CCHHHHHHHHHHccCChhhCCCHHHHHHHHHHH
Confidence 21 2222222222 2111 1111 224589999999999999999999999999875
No 65
>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]
Probab=100.00 E-value=9.7e-42 Score=341.62 Aligned_cols=262 Identities=22% Similarity=0.402 Sum_probs=217.4
Q ss_pred hhccccccccccccccceeEEEEEecC--CCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCCCC
Q 011360 189 KKEDCFASLEKIGSGGCGEVYKAELPG--SNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQIRHRN 266 (487)
Q Consensus 189 ~~~~~~~~~~~lg~G~~g~v~~~~~~~--~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpn 266 (487)
.......+.++||.|.||.|++|+++. .....||||.++. .-.+...+.|+.|+.+|-++.|||
T Consensus 626 Id~s~i~Ie~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~--------------GytekqrrdFL~EAsIMGQFdHPN 691 (996)
T KOG0196|consen 626 IDPSCVKIEKVIGAGEFGEVCSGRLKLPGKREITVAIKTLKA--------------GYTEKQRRDFLSEASIMGQFDHPN 691 (996)
T ss_pred cChhheEEEEEEecccccceecccccCCCCcceeEEEeeecc--------------CccHHHHhhhhhhhhhcccCCCCc
Confidence 344567888999999999999998753 3346899999843 233456778999999999999999
Q ss_pred ccccceEEecCCeeEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeC
Q 011360 267 ILPLLAHMVRPDCHLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVLLN 346 (487)
Q Consensus 267 Iv~l~~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nill~ 346 (487)
|+++.|+.....+++||+|||++|+|..||.. +.+.+++.+..-+++.|+.|++|| .+.|+|||||.++|||++
T Consensus 692 IIrLEGVVTks~PvMIiTEyMENGsLDsFLR~---~DGqftviQLVgMLrGIAsGMkYL---sdm~YVHRDLAARNILVN 765 (996)
T KOG0196|consen 692 IIRLEGVVTKSKPVMIITEYMENGSLDSFLRQ---NDGQFTVIQLVGMLRGIASGMKYL---SDMNYVHRDLAARNILVN 765 (996)
T ss_pred EEEEEEEEecCceeEEEhhhhhCCcHHHHHhh---cCCceEeehHHHHHHHHHHHhHHH---hhcCchhhhhhhhheeec
Confidence 99999999999999999999999999999985 346699999999999999999999 888999999999999999
Q ss_pred CCCCEEEeccCCccccCCCCceeeEeee--cccccccCCcccCCCCCCchhHHHHHHHHHHHHHh-CCCCccccCCCCcc
Q 011360 347 DDMEACISDLGLAMAIPDGYTRVLISYV--LGTMAYIAPEYFQQPELSEKCDIFSFGMLLISLVR-GVPSFVFHQNGEEI 423 (487)
Q Consensus 347 ~~~~~kl~DFg~s~~~~~~~~~~~~~~~--~gt~~y~aPE~l~~~~~~~~~DvwslG~~l~ellt-g~~pf~~~~~~~~~ 423 (487)
.+...|++|||+++.+.++.... .++. .-+++|.|||.+....++.+|||||||++|||.++ |..|| .+.
T Consensus 766 snLvCKVsDFGLSRvledd~~~~-ytt~GGKIPiRWTAPEAIa~RKFTsASDVWSyGIVmWEVmSyGERPY------Wdm 838 (996)
T KOG0196|consen 766 SNLVCKVSDFGLSRVLEDDPEAA-YTTLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPY------WDM 838 (996)
T ss_pred cceEEEeccccceeecccCCCcc-ccccCCccceeecChhHhhhcccCchhhccccceEEEEecccCCCcc------ccc
Confidence 99999999999999876544211 1111 12679999999999999999999999999999997 89999 344
Q ss_pred ccHHHHHHHHhcCCCCCccCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCChHHHHHHHhhhC
Q 011360 424 CSPEWLRKVMNSKNPSRAIDPRLPGNGYEKKMLHVLKIAYICTLHDPEERPNSQYVRCRLSQLL 487 (487)
Q Consensus 424 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~~il~~L~~ll 487 (487)
...+.+..+..+.+.+...| +| ..|.+||..||++|-.+||.+.+|+..|+++|
T Consensus 839 SNQdVIkaIe~gyRLPpPmD--CP--------~aL~qLMldCWqkdR~~RP~F~qiV~~lDklI 892 (996)
T KOG0196|consen 839 SNQDVIKAIEQGYRLPPPMD--CP--------AALYQLMLDCWQKDRNRRPKFAQIVSTLDKLI 892 (996)
T ss_pred chHHHHHHHHhccCCCCCCC--Cc--------HHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHh
Confidence 44455555555444433222 33 45999999999999999999999999999875
No 66
>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn. Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa
Probab=100.00 E-value=5.7e-40 Score=313.00 Aligned_cols=256 Identities=23% Similarity=0.358 Sum_probs=203.6
Q ss_pred ccccccccccccccceeEEEEEecCCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCCCCcccc
Q 011360 191 EDCFASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQIRHRNILPL 270 (487)
Q Consensus 191 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l 270 (487)
.++|.+.+.||.|+||.||+|... ++..||+|.+.. .......+.+|+.+++.++||||+++
T Consensus 5 ~~~~~~~~~lg~g~~g~v~~~~~~--~~~~v~iK~~~~----------------~~~~~~~~~~e~~~l~~l~h~~i~~~ 66 (261)
T cd05072 5 RESIKLVKKLGAGQFGEVWMGYYN--NSTKVAVKTLKP----------------GTMSVQAFLEEANLMKTLQHDKLVRL 66 (261)
T ss_pred hHHeEEeeecCCcCCceEEEEEec--CCceEEEEEccC----------------CchhHHHHHHHHHHHHhCCCCCeeeE
Confidence 456999999999999999999754 567899998632 11124567889999999999999999
Q ss_pred ceEEecCCeeEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCC
Q 011360 271 LAHMVRPDCHLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVLLNDDME 350 (487)
Q Consensus 271 ~~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nill~~~~~ 350 (487)
++.+...+..+++|||+++++|.+++.. .....+++..+..++.|++.||+|| |+.+++||||+|+||+++.++.
T Consensus 67 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~--~~~~~~~~~~~~~~~~~l~~~l~~L---H~~~i~H~dl~p~nili~~~~~ 141 (261)
T cd05072 67 YAVVTKEEPIYIITEYMAKGSLLDFLKS--DEGGKVLLPKLIDFSAQIAEGMAYI---ERKNYIHRDLRAANVLVSESLM 141 (261)
T ss_pred EEEEcCCCCcEEEEecCCCCcHHHHHHH--hcCCCCCHHHHHHHHHHHHHHHHHH---HHCCeeccccchhhEEecCCCc
Confidence 9999999999999999999999999875 2345688889999999999999999 6678999999999999999999
Q ss_pred EEEeccCCccccCCCCceeeEeeecccccccCCcccCCCCCCchhHHHHHHHHHHHHHh-CCCCccccCCCCccccHHHH
Q 011360 351 ACISDLGLAMAIPDGYTRVLISYVLGTMAYIAPEYFQQPELSEKCDIFSFGMLLISLVR-GVPSFVFHQNGEEICSPEWL 429 (487)
Q Consensus 351 ~kl~DFg~s~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DvwslG~~l~ellt-g~~pf~~~~~~~~~~~~~~~ 429 (487)
++|+|||++.......... .....++..|+|||++.+..++.++||||||+++|+|+| |..||..... ....
T Consensus 142 ~~l~dfg~~~~~~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~------~~~~ 214 (261)
T cd05072 142 CKIADFGLARVIEDNEYTA-REGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLYEIVTYGKIPYPGMSN------SDVM 214 (261)
T ss_pred EEECCCccceecCCCceec-cCCCccceecCCHHHhccCCCChhhhhhhhHHHHHHHHccCCCCCCCCCH------HHHH
Confidence 9999999998765432211 122345678999999988889999999999999999998 8999943221 1222
Q ss_pred HHHHhcCCCCCccCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCChHHHHHHHhhh
Q 011360 430 RKVMNSKNPSRAIDPRLPGNGYEKKMLHVLKIAYICTLHDPEERPNSQYVRCRLSQL 486 (487)
Q Consensus 430 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~~il~~L~~l 486 (487)
.... ..... .... ..+.++.+++.+||..+|++|||+++|.+.|+++
T Consensus 215 ~~~~-~~~~~-~~~~--------~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~ 261 (261)
T cd05072 215 SALQ-RGYRM-PRME--------NCPDELYDIMKTCWKEKAEERPTFDYLQSVLDDF 261 (261)
T ss_pred HHHH-cCCCC-CCCC--------CCCHHHHHHHHHHccCCcccCcCHHHHHHHHhcC
Confidence 2222 11111 0011 1235688999999999999999999999999874
No 67
>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=100.00 E-value=3.8e-42 Score=302.02 Aligned_cols=256 Identities=22% Similarity=0.356 Sum_probs=209.7
Q ss_pred hhccccccccccccccceeEEEEEecCCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCCCCcc
Q 011360 189 KKEDCFASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQIRHRNIL 268 (487)
Q Consensus 189 ~~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv 268 (487)
...+.|++-+.||+|.|+.|+++ .+..+|+.+|+|++.. ...+....+.+.+|+.+.+.|+|||||
T Consensus 8 ~f~d~y~l~e~igkG~FSvVrRc-~~~~tg~~fa~kiin~-------------~k~~~~~~e~l~rEarIC~~LqHP~Iv 73 (355)
T KOG0033|consen 8 KFSDNYDVKEELGKGAFSVVRRC-VHKTTGLEFAAKIINT-------------KKLSARDFQKLEREARICRKLQHPNIV 73 (355)
T ss_pred ccchhhhHHHHHccCchHHHHHH-HhccchHHHHHHHhhh-------------hhhccccHHHHHHHHHHHHhcCCCcEe
Confidence 34567999999999999999999 4678999999997722 233344677889999999999999999
Q ss_pred ccceEEecCCeeEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCC-
Q 011360 269 PLLAHMVRPDCHLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVLLND- 347 (487)
Q Consensus 269 ~l~~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nill~~- 347 (487)
++.+.+......|+|+|++.|++|..-+-. ...+++..+-.+++||+.+|.|+ |.+||||||+||.|+++..
T Consensus 74 rL~~ti~~~~~~ylvFe~m~G~dl~~eIV~----R~~ySEa~aSH~~rQiLeal~yC---H~n~IvHRDvkP~nllLASK 146 (355)
T KOG0033|consen 74 RLHDSIQEESFHYLVFDLVTGGELFEDIVA----REFYSEADASHCIQQILEALAYC---HSNGIVHRDLKPENLLLASK 146 (355)
T ss_pred ehhhhhcccceeEEEEecccchHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHH---HhcCceeccCChhheeeeec
Confidence 999999999999999999999999766543 24577888899999999999999 8899999999999999963
Q ss_pred --CCCEEEeccCCccccCCCCceeeEeeecccccccCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCccccCCCCcccc
Q 011360 348 --DMEACISDLGLAMAIPDGYTRVLISYVLGTMAYIAPEYFQQPELSEKCDIFSFGMLLISLVRGVPSFVFHQNGEEICS 425 (487)
Q Consensus 348 --~~~~kl~DFg~s~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DvwslG~~l~elltg~~pf~~~~~~~~~~~ 425 (487)
..-+||+|||++..+..+. ......|||.|||||++...+|+..+|||+.|++||-|+.|.+||.+. ..
T Consensus 147 ~~~A~vKL~~FGvAi~l~~g~---~~~G~~GtP~fmaPEvvrkdpy~kpvDiW~cGViLfiLL~G~~PF~~~------~~ 217 (355)
T KOG0033|consen 147 AKGAAVKLADFGLAIEVNDGE---AWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDE------DQ 217 (355)
T ss_pred cCCCceeecccceEEEeCCcc---ccccccCCCcccCHHHhhcCCCCCcchhhhhhHHHHHHHhCCCCCCCc------cH
Confidence 3458999999999887433 235678999999999999999999999999999999999999999332 22
Q ss_pred HHHHHHHHhcCCCCCccCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCChHHHHH
Q 011360 426 PEWLRKVMNSKNPSRAIDPRLPGNGYEKKMLHVLKIAYICTLHDPEERPNSQYVRC 481 (487)
Q Consensus 426 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~~il~ 481 (487)
.....++..+. ..+++.....+..+..+++++||..||.+|.|+.+.+.
T Consensus 218 ~rlye~I~~g~-------yd~~~~~w~~is~~Ak~LvrrML~~dP~kRIta~EAL~ 266 (355)
T KOG0033|consen 218 HRLYEQIKAGA-------YDYPSPEWDTVTPEAKSLIRRMLTVNPKKRITADEALK 266 (355)
T ss_pred HHHHHHHhccc-------cCCCCcccCcCCHHHHHHHHHHhccChhhhccHHHHhC
Confidence 23333343322 12444445556677899999999999999999998764
No 68
>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto
Probab=100.00 E-value=4.7e-40 Score=325.21 Aligned_cols=267 Identities=24% Similarity=0.330 Sum_probs=204.6
Q ss_pred hhccccccccccccccceeEEEEEec----CCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccC-C
Q 011360 189 KKEDCFASLEKIGSGGCGEVYKAELP----GSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQI-R 263 (487)
Q Consensus 189 ~~~~~~~~~~~lg~G~~g~v~~~~~~----~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~ 263 (487)
...++|.+.+.||.|+||.||+|... ..+++.||+|++... ........+..|+.++.++ +
T Consensus 4 ~~~~~~~i~~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~--------------~~~~~~~~~~~E~~~~~~l~~ 69 (337)
T cd05054 4 FPRDRLKLGKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEG--------------ATASEYKALMTELKILIHIGH 69 (337)
T ss_pred cCHHHhhhhcccccCcCceEEeccccccccccccceeeeeeccCC--------------CCHHHHHHHHHHHHHHHhhcc
Confidence 34557999999999999999999642 234578999987321 1122345677899999999 8
Q ss_pred CCCccccceEEec-CCeeEEEEEecCCCCHHHHHhhhhc-----------------------------------------
Q 011360 264 HRNILPLLAHMVR-PDCHLLVYEFMKNGSLQDILDDVSR----------------------------------------- 301 (487)
Q Consensus 264 hpnIv~l~~~~~~-~~~~~lv~E~~~~gsL~~~l~~~~~----------------------------------------- 301 (487)
||||+++++++.. +..++++|||+++++|.+++.....
T Consensus 70 h~niv~~~~~~~~~~~~~~~v~ey~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (337)
T cd05054 70 HLNVVNLLGACTKPGGPLMVIVEYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRLDSVSSSQSSASSGFIE 149 (337)
T ss_pred CcchhheeeeEecCCCCEEEEEecCCCCCHHHHHHhccccccccccccccccccccccccccccccCCcccccccccccc
Confidence 9999999998765 4678899999999999999864211
Q ss_pred ----------------CCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCCEEEeccCCccccCCC
Q 011360 302 ----------------GRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVLLNDDMEACISDLGLAMAIPDG 365 (487)
Q Consensus 302 ----------------~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nill~~~~~~kl~DFg~s~~~~~~ 365 (487)
....+++..+..++.|++.||.|| |++||+||||||+||+++.++.++|+|||++..+...
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~l---H~~~ivHrDikp~Nill~~~~~vkL~DfG~a~~~~~~ 226 (337)
T cd05054 150 DKSLSDVEEDEEGDELYKEPLTLEDLISYSFQVARGMEFL---ASRKCIHRDLAARNILLSENNVVKICDFGLARDIYKD 226 (337)
T ss_pred CcchhhcccchhhhHHhhcCCCHHHHHHHHHHHHHHHHHH---HhCCeecCCCCcceEEEeCCCcEEEeccccchhcccC
Confidence 023688999999999999999999 7789999999999999999999999999999876443
Q ss_pred CceeeEeeecccccccCCcccCCCCCCchhHHHHHHHHHHHHHh-CCCCccccCCCCccccHHHHHHHHhcCCCCCccCC
Q 011360 366 YTRVLISYVLGTMAYIAPEYFQQPELSEKCDIFSFGMLLISLVR-GVPSFVFHQNGEEICSPEWLRKVMNSKNPSRAIDP 444 (487)
Q Consensus 366 ~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DvwslG~~l~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 444 (487)
..........++..|+|||++.+..++.++|||||||++|||++ |..||...... +............ .
T Consensus 227 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~SlGv~l~el~t~g~~p~~~~~~~------~~~~~~~~~~~~~-~--- 296 (337)
T cd05054 227 PDYVRKGDARLPLKWMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQID------EEFCRRLKEGTRM-R--- 296 (337)
T ss_pred cchhhccCCCCCccccCcHHhcCCCCCccccHHHHHHHHHHHHHcCCCCCCCCCcc------HHHHHHHhccCCC-C---
Confidence 22222223446778999999999999999999999999999998 99999543221 1122222221111 1
Q ss_pred CCCCCCcHHHHHHHHHHHhhccCCCCCCCCChHHHHHHHhhhC
Q 011360 445 RLPGNGYEKKMLHVLKIAYICTLHDPEERPNSQYVRCRLSQLL 487 (487)
Q Consensus 445 ~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~~il~~L~~ll 487 (487)
.+ ...+.++.+++.+||+.+|++|||+.+|++.|++++
T Consensus 297 -~~----~~~~~~~~~l~~~cl~~~p~~RPs~~ell~~l~~~~ 334 (337)
T cd05054 297 -AP----EYATPEIYSIMLDCWHNNPEDRPTFSELVEILGDLL 334 (337)
T ss_pred -CC----ccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence 11 112356889999999999999999999999998864
No 69
>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase. Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays
Probab=100.00 E-value=9.9e-40 Score=311.78 Aligned_cols=257 Identities=21% Similarity=0.335 Sum_probs=204.6
Q ss_pred cccccccccccccceeEEEEEecCCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCCCCccccc
Q 011360 192 DCFASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQIRHRNILPLL 271 (487)
Q Consensus 192 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~ 271 (487)
..|.+.+.||.|++|.||+|.+. .++..||+|.+.. .......+.+|+.+++.++||||++++
T Consensus 6 ~~~~~~~~ig~g~~~~v~~~~~~-~~~~~~~~K~~~~----------------~~~~~~~~~~e~~~l~~l~h~~i~~~~ 68 (263)
T cd05052 6 TDITMKHKLGGGQYGEVYEGVWK-KYSLTVAVKTLKE----------------DTMEVEEFLKEAAVMKEIKHPNLVQLL 68 (263)
T ss_pred HHeEEeeecCCcccceEEEEEEe-cCCceEEEEEecC----------------CchHHHHHHHHHHHHHhCCCCChhheE
Confidence 34888899999999999999764 5788999998731 122345678899999999999999999
Q ss_pred eEEecCCeeEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCCE
Q 011360 272 AHMVRPDCHLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVLLNDDMEA 351 (487)
Q Consensus 272 ~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nill~~~~~~ 351 (487)
+++...+..+++|||+++++|.+++.. .....+++..+..++.|++.||+|| |++|++||||||+||++++++.+
T Consensus 69 ~~~~~~~~~~lv~e~~~~~~L~~~~~~--~~~~~l~~~~~~~~~~ql~~~l~~l---H~~~i~H~dlkp~nil~~~~~~~ 143 (263)
T cd05052 69 GVCTREPPFYIITEFMTYGNLLDYLRE--CNRQEVNAVVLLYMATQISSAMEYL---EKKNFIHRDLAARNCLVGENHLV 143 (263)
T ss_pred EEEcCCCCcEEEEEeCCCCcHHHHHHh--CCCCCCCHHHHHHHHHHHHHHHHHH---HhCCEeecccCcceEEEcCCCcE
Confidence 999999999999999999999999864 2345689999999999999999999 77889999999999999999999
Q ss_pred EEeccCCccccCCCCceeeEeeecccccccCCcccCCCCCCchhHHHHHHHHHHHHHh-CCCCccccCCCCccccHHHHH
Q 011360 352 CISDLGLAMAIPDGYTRVLISYVLGTMAYIAPEYFQQPELSEKCDIFSFGMLLISLVR-GVPSFVFHQNGEEICSPEWLR 430 (487)
Q Consensus 352 kl~DFg~s~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DvwslG~~l~ellt-g~~pf~~~~~~~~~~~~~~~~ 430 (487)
||+|||++.......... .....+++.|+|||.+.+..++.++||||||+++|||++ |..||.... ..+...
T Consensus 144 kl~df~~~~~~~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~------~~~~~~ 216 (263)
T cd05052 144 KVADFGLSRLMTGDTYTA-HAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGID------LSQVYE 216 (263)
T ss_pred EeCCCccccccccceeec-cCCCCCccccCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCC------HHHHHH
Confidence 999999997764432211 112234678999999998899999999999999999998 899984322 122222
Q ss_pred HHHhcCCCCCccCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCChHHHHHHHhhhC
Q 011360 431 KVMNSKNPSRAIDPRLPGNGYEKKMLHVLKIAYICTLHDPEERPNSQYVRCRLSQLL 487 (487)
Q Consensus 431 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~~il~~L~~ll 487 (487)
.......+ ..+.. .+.++.+++.+||..+|++|||+.++++.|+.++
T Consensus 217 ~~~~~~~~--~~~~~--------~~~~~~~li~~cl~~~p~~Rp~~~~l~~~l~~~~ 263 (263)
T cd05052 217 LLEKGYRM--ERPEG--------CPPKVYELMRACWQWNPSDRPSFAEIHQAFETMF 263 (263)
T ss_pred HHHCCCCC--CCCCC--------CCHHHHHHHHHHccCCcccCCCHHHHHHHHHhhC
Confidence 22211111 11111 2356889999999999999999999999999874
No 70
>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt
Probab=100.00 E-value=9.2e-40 Score=314.78 Aligned_cols=261 Identities=22% Similarity=0.349 Sum_probs=205.1
Q ss_pred cccccccccccccceeEEEEEecC----CCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCCCCc
Q 011360 192 DCFASLEKIGSGGCGEVYKAELPG----SNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQIRHRNI 267 (487)
Q Consensus 192 ~~~~~~~~lg~G~~g~v~~~~~~~----~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnI 267 (487)
++|.+.+.||.|+||.||+|.+.. .++..||+|.+.. .........+.+|+.++..++||||
T Consensus 5 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~--------------~~~~~~~~~~~~e~~~l~~l~~~~i 70 (280)
T cd05049 5 DTIVLKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKE--------------TASNDARKDFEREAELLTNFQHENI 70 (280)
T ss_pred HHhhHHhhccccCCceEeeeeeccccCcCCcceEEEEeecc--------------cCCHHHHHHHHHHHHHHHhcCCCCc
Confidence 458899999999999999997632 3467899998732 1122245678899999999999999
Q ss_pred cccceEEecCCeeEEEEEecCCCCHHHHHhhhh----------cCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecC
Q 011360 268 LPLLAHMVRPDCHLLVYEFMKNGSLQDILDDVS----------RGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGD 337 (487)
Q Consensus 268 v~l~~~~~~~~~~~lv~E~~~~gsL~~~l~~~~----------~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~D 337 (487)
+++++++......++||||+++++|.+++.... .....+++..+..++.|++.||.|| |++|++|||
T Consensus 71 ~~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~l---H~~~i~h~d 147 (280)
T cd05049 71 VKFYGVCTEGDPPIMVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYL---ASQHFVHRD 147 (280)
T ss_pred hheeeEEecCCCeEEEEecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHH---hhCCeeccc
Confidence 999999999999999999999999999997532 1234578889999999999999999 788999999
Q ss_pred CCCCCEEeCCCCCEEEeccCCccccCCCCceeeEeeecccccccCCcccCCCCCCchhHHHHHHHHHHHHHh-CCCCccc
Q 011360 338 IKPRNVLLNDDMEACISDLGLAMAIPDGYTRVLISYVLGTMAYIAPEYFQQPELSEKCDIFSFGMLLISLVR-GVPSFVF 416 (487)
Q Consensus 338 lkp~Nill~~~~~~kl~DFg~s~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DvwslG~~l~ellt-g~~pf~~ 416 (487)
|||+||+++.++.++|+|||++................+++.|+|||++.+..++.++||||||+++|+|++ |..||..
T Consensus 148 lkp~nili~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~e~~~~g~~p~~~ 227 (280)
T cd05049 148 LATRNCLVGYDLVVKIGDFGMSRDVYTTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVVLWEIFTYGKQPWYG 227 (280)
T ss_pred cccceEEEcCCCeEEECCcccceecccCcceecCCCCcccceecChhhhccCCcchhhhHHHHHHHHHHHHhcCCCCCCC
Confidence 999999999999999999999876533222111123345788999999999999999999999999999998 9999843
Q ss_pred cCCCCccccHHHHHHHHhcCCCCCccCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCChHHHHHHHhh
Q 011360 417 HQNGEEICSPEWLRKVMNSKNPSRAIDPRLPGNGYEKKMLHVLKIAYICTLHDPEERPNSQYVRCRLSQ 485 (487)
Q Consensus 417 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~~il~~L~~ 485 (487)
... .+...... .+.... .+. ..+..+.+++.+||+.||++|||+.+|++.|++
T Consensus 228 ~~~------~~~~~~~~-~~~~~~-~~~--------~~~~~~~~li~~~l~~~p~~Rp~~~eil~~l~~ 280 (280)
T cd05049 228 LSN------EEVIECIT-QGRLLQ-RPR--------TCPSEVYDIMLGCWKRDPQQRINIKDIHERLQK 280 (280)
T ss_pred CCH------HHHHHHHH-cCCcCC-CCC--------CCCHHHHHHHHHHcCCCcccCCCHHHHHHHhhC
Confidence 322 22222222 222111 111 123568899999999999999999999999864
No 71
>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate
Probab=100.00 E-value=4.4e-40 Score=324.35 Aligned_cols=245 Identities=20% Similarity=0.294 Sum_probs=195.4
Q ss_pred cccccccceeEEEEEecCCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCCCCccccceEEecC
Q 011360 198 EKIGSGGCGEVYKAELPGSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQIRHRNILPLLAHMVRP 277 (487)
Q Consensus 198 ~~lg~G~~g~v~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~ 277 (487)
+.||.|+||.||++.. ..++..||+|++... ..........+.+|+.+++.++||||+++++++...
T Consensus 1 ~~lG~G~~g~Vy~~~~-~~~~~~~avK~~~~~------------~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~ 67 (328)
T cd05593 1 KLLGKGTFGKVILVRE-KASGKYYAMKILKKE------------VIIAKDEVAHTLTESRVLKNTRHPFLTSLKYSFQTK 67 (328)
T ss_pred CeeeeCCCEEEEEEEE-CCCCCEEEEEEEEHH------------HhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcC
Confidence 3689999999999974 467899999988421 111233456778899999999999999999999999
Q ss_pred CeeEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCCEEEeccC
Q 011360 278 DCHLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVLLNDDMEACISDLG 357 (487)
Q Consensus 278 ~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nill~~~~~~kl~DFg 357 (487)
+.+|+||||+++|+|.+++.. ...+++..+..++.|++.||.|| |++||+||||||+|||++.++.+||+|||
T Consensus 68 ~~~~lv~Ey~~~g~L~~~l~~----~~~l~~~~~~~~~~qi~~aL~~L---H~~~ivHrDikp~NIll~~~~~~kL~DfG 140 (328)
T cd05593 68 DRLCFVMEYVNGGELFFHLSR----ERVFSEDRTRFYGAEIVSALDYL---HSGKIVYRDLKLENLMLDKDGHIKITDFG 140 (328)
T ss_pred CEEEEEEeCCCCCCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHH---HhCCeEecccCHHHeEECCCCcEEEecCc
Confidence 999999999999999988864 45689999999999999999999 77899999999999999999999999999
Q ss_pred CccccCCCCceeeEeeecccccccCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCccccCCCCccccHHHHHHHHhcCC
Q 011360 358 LAMAIPDGYTRVLISYVLGTMAYIAPEYFQQPELSEKCDIFSFGMLLISLVRGVPSFVFHQNGEEICSPEWLRKVMNSKN 437 (487)
Q Consensus 358 ~s~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DvwslG~~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~ 437 (487)
++........ ......||+.|+|||++.+..++.++|||||||++|+|++|..||...+. .+........ .
T Consensus 141 ~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~Pf~~~~~------~~~~~~~~~~-~ 211 (328)
T cd05593 141 LCKEGITDAA--TMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH------EKLFELILME-D 211 (328)
T ss_pred CCccCCCccc--ccccccCCcCccChhhhcCCCCCccCCccccchHHHHHhhCCCCCCCCCH------HHHHHHhccC-C
Confidence 9875332211 12345699999999999988999999999999999999999999943321 1222222211 1
Q ss_pred CCCccCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCC-----ChHHHHH
Q 011360 438 PSRAIDPRLPGNGYEKKMLHVLKIAYICTLHDPEERP-----NSQYVRC 481 (487)
Q Consensus 438 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RP-----s~~~il~ 481 (487)
. . ++.. .+.++.+++.+||..||++|| ++.++++
T Consensus 212 ~--~----~p~~----~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~ 250 (328)
T cd05593 212 I--K----FPRT----LSADAKSLLSGLLIKDPNKRLGGGPDDAKEIMR 250 (328)
T ss_pred c--c----CCCC----CCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHhc
Confidence 1 1 1211 234688999999999999997 7888874
No 72
>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament
Probab=100.00 E-value=3.3e-40 Score=319.42 Aligned_cols=260 Identities=21% Similarity=0.338 Sum_probs=195.9
Q ss_pred cccccccccccccceeEEEEEecCCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCCCCccccc
Q 011360 192 DCFASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQIRHRNILPLL 271 (487)
Q Consensus 192 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~ 271 (487)
+.|.+.+.||.|+||.||+|.. ..++..||+|.+.... .......+.+|+.+++.++||||++++
T Consensus 5 ~~y~~~~~lg~G~~g~Vy~~~~-~~~~~~vaiK~~~~~~--------------~~~~~~~~~~E~~~l~~l~h~niv~~~ 69 (288)
T cd07871 5 ETYVKLDKLGEGTYATVFKGRS-KLTENLVALKEIRLEH--------------EEGAPCTAIREVSLLKNLKHANIVTLH 69 (288)
T ss_pred ccceEeeEEecCCCEEEEEEEE-CCCCCEEEEEEecccc--------------cCCcchhHHHHHHHHHhCCCCCEeeEE
Confidence 4699999999999999999974 4578999999874311 111223567899999999999999999
Q ss_pred eEEecCCeeEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCCE
Q 011360 272 AHMVRPDCHLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVLLNDDMEA 351 (487)
Q Consensus 272 ~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nill~~~~~~ 351 (487)
+++...+..++||||+++ +|.+++.. .+..+++..+..++.|++.||+|| |++||+||||||+|||++.++.+
T Consensus 70 ~~~~~~~~~~lv~e~~~~-~l~~~l~~---~~~~~~~~~~~~~~~qi~~aL~~L---H~~~ivH~dlkp~Nil~~~~~~~ 142 (288)
T cd07871 70 DIIHTERCLTLVFEYLDS-DLKQYLDN---CGNLMSMHNVKIFMFQLLRGLSYC---HKRKILHRDLKPQNLLINEKGEL 142 (288)
T ss_pred EEEcCCCeEEEEEeCCCc-CHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHH---HhCCcccCCCCHHHEEECCCCCE
Confidence 999999999999999964 89888864 234578899999999999999999 77899999999999999999999
Q ss_pred EEeccCCccccCCCCceeeEeeecccccccCCcccCC-CCCCchhHHHHHHHHHHHHHhCCCCccccCCCCccccHHHHH
Q 011360 352 CISDLGLAMAIPDGYTRVLISYVLGTMAYIAPEYFQQ-PELSEKCDIFSFGMLLISLVRGVPSFVFHQNGEEICSPEWLR 430 (487)
Q Consensus 352 kl~DFg~s~~~~~~~~~~~~~~~~gt~~y~aPE~l~~-~~~~~~~DvwslG~~l~elltg~~pf~~~~~~~~~~~~~~~~ 430 (487)
||+|||++......... .....+++.|+|||++.+ ..++.++||||+||++|+|+||.+||...... +...
T Consensus 143 kl~DfG~~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~pf~~~~~~------~~~~ 214 (288)
T cd07871 143 KLADFGLARAKSVPTKT--YSNEVVTLWYRPPDVLLGSTEYSTPIDMWGVGCILYEMATGRPMFPGSTVK------EELH 214 (288)
T ss_pred EECcCcceeeccCCCcc--ccCceecccccChHHhcCCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHH------HHHH
Confidence 99999998765332211 133457999999998865 56899999999999999999999999544321 1111
Q ss_pred HHHh--cCCCCCc-------------cCCCCCCC----CcHHHHHHHHHHHhhccCCCCCCCCChHHHHH
Q 011360 431 KVMN--SKNPSRA-------------IDPRLPGN----GYEKKMLHVLKIAYICTLHDPEERPNSQYVRC 481 (487)
Q Consensus 431 ~~~~--~~~~~~~-------------~~~~~~~~----~~~~~~~~l~~li~~cl~~~P~~RPs~~~il~ 481 (487)
.+.. +..+... .-+..... .......++.+++.+||+.||.+|||++++++
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dp~~R~t~~~~l~ 284 (288)
T cd07871 215 LIFRLLGTPTEETWPGITSNEEFRSYLFPQYRAQPLINHAPRLDTDGIDLLSSLLLYETKSRISAEAALR 284 (288)
T ss_pred HHHHHhCCCChHHhhccccchhhhccccCccCCCchHHhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhc
Confidence 1111 0000000 00000000 00112356789999999999999999999975
No 73
>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus
Probab=100.00 E-value=1.2e-39 Score=325.81 Aligned_cols=256 Identities=24% Similarity=0.364 Sum_probs=195.3
Q ss_pred ccccccccccccceeEEEEEecCCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCCCCccccce
Q 011360 193 CFASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQIRHRNILPLLA 272 (487)
Q Consensus 193 ~~~~~~~lg~G~~g~v~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~ 272 (487)
+|++.+.||.|+||.||++.. ..+++.||+|++.. ...........+..|..++..++||||+++++
T Consensus 2 ~y~~~~~LG~G~~g~V~~~~~-~~~~~~~aiK~~~~------------~~~~~~~~~~~~~~E~~il~~~~~~~iv~~~~ 68 (363)
T cd05628 2 DFESLKVIGRGAFGEVRLVQK-KDTGHVYAMKILRK------------ADMLEKEQVGHIRAERDILVEADSLWVVKMFY 68 (363)
T ss_pred CceEeEEEEeCCCEEEEEEEE-CCCCCEEEEEEEEH------------HHHHHhhHHHHHHHHHHHHHhCCCCCcceEEE
Confidence 588999999999999999974 45789999998842 11122334567788999999999999999999
Q ss_pred EEecCCeeEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCCEE
Q 011360 273 HMVRPDCHLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVLLNDDMEAC 352 (487)
Q Consensus 273 ~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nill~~~~~~k 352 (487)
.+.+...+|+|||||+||+|.+++.. ...+++..+..++.|++.||.|| |++||+||||||+|||++.++.+|
T Consensus 69 ~~~~~~~~~lv~E~~~gg~L~~~l~~----~~~l~~~~~~~~~~qi~~aL~~l---H~~givHrDlKp~NILi~~~~~vk 141 (363)
T cd05628 69 SFQDKLNLYLIMEFLPGGDMMTLLMK----KDTLTEEETQFYIAETVLAIDSI---HQLGFIHRDIKPDNLLLDSKGHVK 141 (363)
T ss_pred EEecCCeEEEEEcCCCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHH---HhCCeEecCCCHHHeEECCCCCEE
Confidence 99999999999999999999999864 45789999999999999999999 788999999999999999999999
Q ss_pred EeccCCccccCCCCce---------------------------------eeEeeecccccccCCcccCCCCCCchhHHHH
Q 011360 353 ISDLGLAMAIPDGYTR---------------------------------VLISYVLGTMAYIAPEYFQQPELSEKCDIFS 399 (487)
Q Consensus 353 l~DFg~s~~~~~~~~~---------------------------------~~~~~~~gt~~y~aPE~l~~~~~~~~~Dvws 399 (487)
|+|||++......... ......+||+.|+|||++.+..++.++||||
T Consensus 142 L~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DvwS 221 (363)
T cd05628 142 LSDFGLCTGLKKAHRTEFYRNLNHSLPSDFTFQNMNSKRKAETWKRNRRQLAFSTVGTPDYIAPEVFMQTGYNKLCDWWS 221 (363)
T ss_pred EeeccCcccccccccccccccccccccccccccccccccccchhhhccccccccccCCccccCHHHHcCCCCCCchhhhh
Confidence 9999998754321100 0012347999999999999989999999999
Q ss_pred HHHHHHHHHhCCCCccccCCCCccccHHHHHHHHhcCCCCCccCCCCCCCCcHHHHHHHHHHHhhccC--CCCCCCCChH
Q 011360 400 FGMLLISLVRGVPSFVFHQNGEEICSPEWLRKVMNSKNPSRAIDPRLPGNGYEKKMLHVLKIAYICTL--HDPEERPNSQ 477 (487)
Q Consensus 400 lG~~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~--~~P~~RPs~~ 477 (487)
|||++|||++|..||.... ..+....+.... ....+++..+ .+.++.+++.+++. .++..||++.
T Consensus 222 lGvil~ell~G~~Pf~~~~------~~~~~~~i~~~~-~~~~~p~~~~------~s~~~~~li~~l~~~~~~r~~r~~~~ 288 (363)
T cd05628 222 LGVIMYEMLIGYPPFCSET------PQETYKKVMNWK-ETLIFPPEVP------ISEKAKDLILRFCCEWEHRIGAPGVE 288 (363)
T ss_pred hHHHHHHHHhCCCCCCCCC------HHHHHHHHHcCc-CcccCCCcCC------CCHHHHHHHHHHcCChhhcCCCCCHH
Confidence 9999999999999994332 122223332211 1111111111 12345566665433 3344578999
Q ss_pred HHHH
Q 011360 478 YVRC 481 (487)
Q Consensus 478 ~il~ 481 (487)
+|++
T Consensus 289 ei~~ 292 (363)
T cd05628 289 EIKT 292 (363)
T ss_pred HHhC
Confidence 9875
No 74
>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment
Probab=100.00 E-value=1.5e-39 Score=311.11 Aligned_cols=260 Identities=22% Similarity=0.347 Sum_probs=205.5
Q ss_pred cccccccccccccceeEEEEEecCC--CCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCCCCccc
Q 011360 192 DCFASLEKIGSGGCGEVYKAELPGS--NGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQIRHRNILP 269 (487)
Q Consensus 192 ~~~~~~~~lg~G~~g~v~~~~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~ 269 (487)
++|.+.+.||.|+||.||+|.+... +...||+|.+.. .........+..|+.+++.++||||++
T Consensus 4 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~--------------~~~~~~~~~~~~e~~~l~~l~h~~i~~ 69 (266)
T cd05033 4 SYVTIEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKA--------------GSSDKQRLDFLTEASIMGQFDHPNIIR 69 (266)
T ss_pred HHceeeeEecCCccceEEEEEEccCCCCcceEEEEEcCC--------------CCChHHHHHHHHHHHHHHhCCCCCcce
Confidence 4689999999999999999987432 346799998732 112233456788999999999999999
Q ss_pred cceEEecCCeeEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCC
Q 011360 270 LLAHMVRPDCHLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVLLNDDM 349 (487)
Q Consensus 270 l~~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nill~~~~ 349 (487)
+++.+...+..+++|||+++++|.+++.. ....+++..+..++.|++.||.|| |++||+||||+|+||+++.++
T Consensus 70 ~~~~~~~~~~~~iv~e~~~~~~L~~~~~~---~~~~~~~~~~~~~~~~l~~~l~~L---h~~~i~H~di~p~nili~~~~ 143 (266)
T cd05033 70 LEGVVTKSRPVMIITEYMENGSLDKFLRE---NDGKFTVGQLVGMLRGIASGMKYL---SEMNYVHRDLAARNILVNSNL 143 (266)
T ss_pred EeEEEecCCceEEEEEcCCCCCHHHHHHh---ccCCCCHHHHHHHHHHHHHHHHHH---HhCCcccCCCCcceEEEcCCC
Confidence 99999999999999999999999999864 234689999999999999999999 678899999999999999999
Q ss_pred CEEEeccCCccccCCCCceeeEeeecccccccCCcccCCCCCCchhHHHHHHHHHHHHHh-CCCCccccCCCCccccHHH
Q 011360 350 EACISDLGLAMAIPDGYTRVLISYVLGTMAYIAPEYFQQPELSEKCDIFSFGMLLISLVR-GVPSFVFHQNGEEICSPEW 428 (487)
Q Consensus 350 ~~kl~DFg~s~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DvwslG~~l~ellt-g~~pf~~~~~~~~~~~~~~ 428 (487)
.++|+|||++................+++.|+|||.+.+..++.++||||||+++|+|++ |..||.... ..+.
T Consensus 144 ~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Dv~slG~~l~~l~~~g~~p~~~~~------~~~~ 217 (266)
T cd05033 144 VCKVSDFGLSRRLEDSEATYTTKGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSYGERPYWDMS------NQDV 217 (266)
T ss_pred CEEECccchhhcccccccceeccCCCCCccccChhhhccCCCccccchHHHHHHHHHHHccCCCCCCCCC------HHHH
Confidence 999999999987753222222222345678999999998899999999999999999998 999984322 1222
Q ss_pred HHHHHhcCCCCCccCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCChHHHHHHHhhhC
Q 011360 429 LRKVMNSKNPSRAIDPRLPGNGYEKKMLHVLKIAYICTLHDPEERPNSQYVRCRLSQLL 487 (487)
Q Consensus 429 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~~il~~L~~ll 487 (487)
........... .+. ..+..+.+++.+||+.+|++|||+.+|++.|++++
T Consensus 218 ~~~~~~~~~~~------~~~----~~~~~l~~li~~cl~~~p~~Rp~~~ei~~~l~~~~ 266 (266)
T cd05033 218 IKAVEDGYRLP------PPM----DCPSALYQLMLDCWQKDRNERPTFSQIVSTLDKMI 266 (266)
T ss_pred HHHHHcCCCCC------CCC----CCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhhC
Confidence 22222211111 111 12356889999999999999999999999999875
No 75
>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh
Probab=100.00 E-value=9e-40 Score=314.52 Aligned_cols=262 Identities=19% Similarity=0.302 Sum_probs=201.8
Q ss_pred ccccccccccccccceeEEEEEecC----CCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCCCC
Q 011360 191 EDCFASLEKIGSGGCGEVYKAELPG----SNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQIRHRN 266 (487)
Q Consensus 191 ~~~~~~~~~lg~G~~g~v~~~~~~~----~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpn 266 (487)
.++|++.+.||.|+||.||+|.+.. .++..||+|++.. .........+.+|+.+++.++|||
T Consensus 5 ~~~~~~~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~--------------~~~~~~~~~~~~e~~~l~~l~~~~ 70 (277)
T cd05062 5 REKITMSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNE--------------AASMRERIEFLNEASVMKEFNCHH 70 (277)
T ss_pred HHHceeeeeeccccCCeEEEEEeccCCCCCceeEEEEEeccc--------------cCCHHHHHHHHHHHHHHHhCCCCC
Confidence 4569999999999999999997532 3456799998632 111123345788999999999999
Q ss_pred ccccceEEecCCeeEEEEEecCCCCHHHHHhhhhcC------CCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCC
Q 011360 267 ILPLLAHMVRPDCHLLVYEFMKNGSLQDILDDVSRG------RRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKP 340 (487)
Q Consensus 267 Iv~l~~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~------~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp 340 (487)
|+++++++......++||||+++|+|.+++...... ...+++..+..++.|++.||.|| |+.|++||||||
T Consensus 71 iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~l---H~~~~vH~dlkp 147 (277)
T cd05062 71 VVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYL---NANKFVHRDLAA 147 (277)
T ss_pred eeeEEEEEcCCCCeEEEEecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHH---HHCCcccCCcch
Confidence 999999999999999999999999999998753221 23457788899999999999999 677899999999
Q ss_pred CCEEeCCCCCEEEeccCCccccCCCCceeeEeeecccccccCCcccCCCCCCchhHHHHHHHHHHHHHh-CCCCccccCC
Q 011360 341 RNVLLNDDMEACISDLGLAMAIPDGYTRVLISYVLGTMAYIAPEYFQQPELSEKCDIFSFGMLLISLVR-GVPSFVFHQN 419 (487)
Q Consensus 341 ~Nill~~~~~~kl~DFg~s~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DvwslG~~l~ellt-g~~pf~~~~~ 419 (487)
+||++++++.++|+|||++................+++.|+|||++.+..++.++||||||+++|||++ |..||....
T Consensus 148 ~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~p~~~~~- 226 (277)
T cd05062 148 RNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGMS- 226 (277)
T ss_pred heEEEcCCCCEEECCCCCccccCCcceeecCCCCccCHhhcChhHhhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCC-
Confidence 999999999999999999876544332221122345788999999998889999999999999999999 688884332
Q ss_pred CCccccHHHHHHHHhcCCCCCccCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCChHHHHHHHhh
Q 011360 420 GEEICSPEWLRKVMNSKNPSRAIDPRLPGNGYEKKMLHVLKIAYICTLHDPEERPNSQYVRCRLSQ 485 (487)
Q Consensus 420 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~~il~~L~~ 485 (487)
..+..........+ . .+.. .+..+.+++.+||+.+|++|||+.++++.|++
T Consensus 227 -----~~~~~~~~~~~~~~-~-----~~~~----~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~~ 277 (277)
T cd05062 227 -----NEQVLRFVMEGGLL-D-----KPDN----CPDMLFELMRMCWQYNPKMRPSFLEIISSIKE 277 (277)
T ss_pred -----HHHHHHHHHcCCcC-C-----CCCC----CCHHHHHHHHHHcCCChhhCcCHHHHHHHhhC
Confidence 12222222222111 1 1111 22468899999999999999999999998863
No 76
>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica
Probab=100.00 E-value=6.7e-40 Score=328.06 Aligned_cols=255 Identities=23% Similarity=0.359 Sum_probs=199.0
Q ss_pred ccccccccccccceeEEEEEecCCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCCCCccccce
Q 011360 193 CFASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQIRHRNILPLLA 272 (487)
Q Consensus 193 ~~~~~~~lg~G~~g~v~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~ 272 (487)
+|.+.+.||.|+||.||+|+. ..+++.||||++.. ...........+.+|+.++..++||||+++++
T Consensus 2 ~y~~~~~lG~G~~g~V~~~~~-~~~~~~vaiK~~~~------------~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~ 68 (364)
T cd05599 2 DFESIKVIGRGAFGEVRLVQK-KDTGHIYAMKKLRK------------SEMLEKEQVAHVRAERDILAEADNPWVVKLYY 68 (364)
T ss_pred CceEEEEEEecCCEEEEEEEE-CCCCCEEEEEEEEH------------HHhhhhhHHHHHHHHHHHHHhCCCCCCcceEE
Confidence 589999999999999999975 45789999999842 11112334566788999999999999999999
Q ss_pred EEecCCeeEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCCEE
Q 011360 273 HMVRPDCHLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVLLNDDMEAC 352 (487)
Q Consensus 273 ~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nill~~~~~~k 352 (487)
++.+++.+|+|||||++|+|.+++.. ...+++..+..++.|++.||.|| |++||+||||||+|||++.++.++
T Consensus 69 ~~~~~~~~~lv~E~~~~g~L~~~l~~----~~~l~~~~~~~~~~qi~~aL~~l---H~~~ivH~Dlkp~NIl~~~~~~~k 141 (364)
T cd05599 69 SFQDENYLYLIMEYLPGGDMMTLLMK----KDTFTEEETRFYIAETILAIDSI---HKLGYIHRDIKPDNLLLDAKGHIK 141 (364)
T ss_pred EEEcCCeEEEEECCCCCcHHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHH---HHCCeEeccCCHHHeEECCCCCEE
Confidence 99999999999999999999999864 45689999999999999999999 778899999999999999999999
Q ss_pred EeccCCccccCCCCcee------------------------------------eEeeecccccccCCcccCCCCCCchhH
Q 011360 353 ISDLGLAMAIPDGYTRV------------------------------------LISYVLGTMAYIAPEYFQQPELSEKCD 396 (487)
Q Consensus 353 l~DFg~s~~~~~~~~~~------------------------------------~~~~~~gt~~y~aPE~l~~~~~~~~~D 396 (487)
|+|||++..+....... .....+||+.|+|||++.+..++.++|
T Consensus 142 l~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~D 221 (364)
T cd05599 142 LSDFGLCTGLKKSHRTEFYRILSHALPSNFLDFISKPMSSKRKAETWKRNRRALAYSTVGTPDYIAPEVFLQTGYNKECD 221 (364)
T ss_pred EeecccceeccccccccccccccccccccccccccccccccccccchhhcccccccccccCccccCHHHHcCCCCCCeee
Confidence 99999987543211000 001245899999999999989999999
Q ss_pred HHHHHHHHHHHHhCCCCccccCCCCccccHHHHHHHHhcCCCCCccCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCC-
Q 011360 397 IFSFGMLLISLVRGVPSFVFHQNGEEICSPEWLRKVMNSKNPSRAIDPRLPGNGYEKKMLHVLKIAYICTLHDPEERPN- 475 (487)
Q Consensus 397 vwslG~~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs- 475 (487)
||||||++|||++|..||..... .+.......... ...++.. ...+..+.+++.+|+. +|.+|++
T Consensus 222 iwSlG~il~el~~G~~Pf~~~~~------~~~~~~i~~~~~-~~~~~~~------~~~s~~~~~li~~ll~-~p~~R~~~ 287 (364)
T cd05599 222 WWSLGVIMYEMLVGYPPFCSDNP------QETYRKIINWKE-TLQFPDE------VPLSPEAKDLIKRLCC-EAERRLGN 287 (364)
T ss_pred eecchhHHHHhhcCCCCCCCCCH------HHHHHHHHcCCC-ccCCCCC------CCCCHHHHHHHHHHcc-CHhhcCCC
Confidence 99999999999999999943321 222222322111 1111111 1123567888889996 9999998
Q ss_pred --hHHHHH
Q 011360 476 --SQYVRC 481 (487)
Q Consensus 476 --~~~il~ 481 (487)
+.++++
T Consensus 288 ~~~~~ll~ 295 (364)
T cd05599 288 NGVNEIKS 295 (364)
T ss_pred CCHHHHhc
Confidence 887765
No 77
>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl
Probab=100.00 E-value=1.4e-39 Score=320.97 Aligned_cols=247 Identities=21% Similarity=0.299 Sum_probs=193.2
Q ss_pred cccccccceeEEEEEecCCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccC-CCCCccccceEEec
Q 011360 198 EKIGSGGCGEVYKAELPGSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQI-RHRNILPLLAHMVR 276 (487)
Q Consensus 198 ~~lg~G~~g~v~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpnIv~l~~~~~~ 276 (487)
+.||.|+||.||+++. ..+++.||+|++.. ...........+..|..++..+ +||||+++++++..
T Consensus 1 ~~lG~G~~g~V~~~~~-~~~~~~~aiK~i~~------------~~~~~~~~~~~~~~e~~il~~~~~hp~Iv~~~~~~~~ 67 (329)
T cd05588 1 RVIGRGSYAKVLLVEL-KKTRRIYAMKVIKK------------ELVNDDEDIDWVQTEKHVFETASNHPFLVGLHSCFQT 67 (329)
T ss_pred CeEeeCCCeEEEEEEE-CCCCCEEEEEEEEH------------HHhhhhhHHHHHHHHHHHHHhccCCCCCCceEEEEEc
Confidence 3689999999999975 45789999998842 1111223455677889998888 79999999999999
Q ss_pred CCeeEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCCEEEecc
Q 011360 277 PDCHLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVLLNDDMEACISDL 356 (487)
Q Consensus 277 ~~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nill~~~~~~kl~DF 356 (487)
.+.+|+||||+++|+|.+++.. ...+++..+..++.|++.||.|| |++||+||||||+||+++.++.+||+||
T Consensus 68 ~~~~~lv~e~~~~g~L~~~~~~----~~~l~~~~~~~~~~qi~~~l~~l---H~~~ivH~dlkp~Nili~~~~~~kL~Df 140 (329)
T cd05588 68 ESRLFFVIEFVSGGDLMFHMQR----QRKLPEEHARFYSAEISLALNFL---HERGIIYRDLKLDNVLLDAEGHIKLTDY 140 (329)
T ss_pred CCEEEEEEeCCCCCCHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHH---HHCCeEecCCCHHHeEECCCCCEEECcC
Confidence 9999999999999999988864 45789999999999999999999 7789999999999999999999999999
Q ss_pred CCccccCCCCceeeEeeecccccccCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCccccCCCC--ccccHHHHHHHHh
Q 011360 357 GLAMAIPDGYTRVLISYVLGTMAYIAPEYFQQPELSEKCDIFSFGMLLISLVRGVPSFVFHQNGE--EICSPEWLRKVMN 434 (487)
Q Consensus 357 g~s~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DvwslG~~l~elltg~~pf~~~~~~~--~~~~~~~~~~~~~ 434 (487)
|++........ ......||+.|+|||++.+..++.++|+|||||++|+|+||..||....... .....++......
T Consensus 141 g~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~ 218 (329)
T cd05588 141 GMCKEGIRPGD--TTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGMSDNPDQNTEDYLFQVIL 218 (329)
T ss_pred ccccccccCCC--ccccccCCccccCHHHHcCCCCCCccceechHHHHHHHHHCCCCcccccccccccccchHHHHHHHH
Confidence 99875322111 1234579999999999999999999999999999999999999996432211 1122233333333
Q ss_pred cCCCCCccCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCCh
Q 011360 435 SKNPSRAIDPRLPGNGYEKKMLHVLKIAYICTLHDPEERPNS 476 (487)
Q Consensus 435 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~ 476 (487)
..... +|.. .+..+.+++.+||+.||.+|||+
T Consensus 219 ~~~~~------~p~~----~~~~~~~li~~~L~~dP~~R~~~ 250 (329)
T cd05588 219 EKQIR------IPRS----LSVKASSVLKGFLNKDPKERLGC 250 (329)
T ss_pred cCCCC------CCCC----CCHHHHHHHHHHhccCHHHcCCC
Confidence 22211 2211 22458899999999999999983
No 78
>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in
Probab=100.00 E-value=1e-39 Score=321.21 Aligned_cols=247 Identities=22% Similarity=0.333 Sum_probs=194.6
Q ss_pred cccccccceeEEEEEec--CCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCCCCccccceEEe
Q 011360 198 EKIGSGGCGEVYKAELP--GSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQIRHRNILPLLAHMV 275 (487)
Q Consensus 198 ~~lg~G~~g~v~~~~~~--~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~ 275 (487)
+.||+|+||.||+++.. ..+++.||+|.+... ...........+..|+.+++.++||||+++++++.
T Consensus 2 ~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~-----------~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~ 70 (323)
T cd05584 2 KVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKA-----------TIVRNQKDTAHTKAERNILEAVKHPFIVDLIYAFQ 70 (323)
T ss_pred ceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHH-----------HHHhhhhhHHHHHHHHHHHHhCCCCchhceeeEEe
Confidence 67999999999999753 246889999988421 00111223456778999999999999999999999
Q ss_pred cCCeeEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCCEEEec
Q 011360 276 RPDCHLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVLLNDDMEACISD 355 (487)
Q Consensus 276 ~~~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nill~~~~~~kl~D 355 (487)
.++..|+||||+++|+|.+++.. ...+++..+..++.|++.||.|| |++||+||||||+|||++.++.+||+|
T Consensus 71 ~~~~~~lv~e~~~~~~L~~~~~~----~~~~~~~~~~~~~~qi~~~l~~l---H~~~ivH~dlkp~Nil~~~~~~~kl~D 143 (323)
T cd05584 71 TGGKLYLILEYLSGGELFMHLER----EGIFMEDTACFYLSEISLALEHL---HQQGIIYRDLKPENILLDAQGHVKLTD 143 (323)
T ss_pred cCCeEEEEEeCCCCchHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHH---HHCCeecCCCCHHHeEECCCCCEEEee
Confidence 99999999999999999999864 45678888999999999999999 778899999999999999999999999
Q ss_pred cCCccccCCCCceeeEeeecccccccCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCccccCCCCccccHHHHHHHHhc
Q 011360 356 LGLAMAIPDGYTRVLISYVLGTMAYIAPEYFQQPELSEKCDIFSFGMLLISLVRGVPSFVFHQNGEEICSPEWLRKVMNS 435 (487)
Q Consensus 356 Fg~s~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DvwslG~~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~ 435 (487)
||++......... .....||+.|+|||++.+..++.++||||||+++|||++|..||..... ..........
T Consensus 144 fg~~~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~pf~~~~~------~~~~~~~~~~ 215 (323)
T cd05584 144 FGLCKESIHEGTV--THTFCGTIEYMAPEILMRSGHGKAVDWWSLGALMYDMLTGAPPFTAENR------KKTIDKILKG 215 (323)
T ss_pred CcCCeecccCCCc--ccccCCCccccChhhccCCCCCCcceecccHHHHHHHhcCCCCCCCCCH------HHHHHHHHcC
Confidence 9998754322211 1335689999999999988899999999999999999999999954321 2222333222
Q ss_pred CCCCCccCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCC-----ChHHHHH
Q 011360 436 KNPSRAIDPRLPGNGYEKKMLHVLKIAYICTLHDPEERP-----NSQYVRC 481 (487)
Q Consensus 436 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RP-----s~~~il~ 481 (487)
. ..+++.+ ...+.+++.+||+.+|++|| +++++++
T Consensus 216 ~---~~~~~~~--------~~~~~~li~~~l~~~p~~R~~~~~~~~~~l~~ 255 (323)
T cd05584 216 K---LNLPPYL--------TPEARDLLKKLLKRNPSSRLGAGPGDAAEVQS 255 (323)
T ss_pred C---CCCCCCC--------CHHHHHHHHHHcccCHhHcCCCCCCCHHHHhc
Confidence 1 1122222 24588999999999999999 7887765
No 79
>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h
Probab=100.00 E-value=1.8e-39 Score=308.63 Aligned_cols=251 Identities=24% Similarity=0.331 Sum_probs=198.8
Q ss_pred ccccccccccccceeEEEEEecCCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCCCCccccce
Q 011360 193 CFASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQIRHRNILPLLA 272 (487)
Q Consensus 193 ~~~~~~~lg~G~~g~v~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~ 272 (487)
.|.+.+.||.|+||.||++.+. ++..+|+|.+.. .......+.+|+.+++.++||||+++++
T Consensus 5 ~~~~~~~lg~G~~~~vy~~~~~--~~~~~a~K~~~~----------------~~~~~~~~~~e~~~l~~l~h~~i~~~~~ 66 (256)
T cd05114 5 ELTFMKELGSGQFGVVHLGKWR--AQIKVAIKAINE----------------GAMSEEDFIEEAKVMMKLSHPKLVQLYG 66 (256)
T ss_pred HcEEeeEecCCcCceEEEEEec--cCceEEEEeccc----------------CCccHHHHHHHHHHHHHCCCCCceeEEE
Confidence 5888999999999999999764 456899997632 1112346788999999999999999999
Q ss_pred EEecCCeeEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCCEE
Q 011360 273 HMVRPDCHLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVLLNDDMEAC 352 (487)
Q Consensus 273 ~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nill~~~~~~k 352 (487)
++...+..++||||+++|+|.+++... ...+++..+..++.|++.||.|| |++|++||||+|+||+++.++.+|
T Consensus 67 ~~~~~~~~~iv~e~~~~~~L~~~~~~~---~~~~~~~~~~~~~~~i~~~l~~l---H~~~i~H~dl~p~ni~i~~~~~~k 140 (256)
T cd05114 67 VCTQQKPLYIVTEFMENGCLLNYLRQR---QGKLSKDMLLSMCQDVCEGMEYL---ERNSFIHRDLAARNCLVSSTGVVK 140 (256)
T ss_pred EEccCCCEEEEEEcCCCCcHHHHHHhC---ccCCCHHHHHHHHHHHHHHHHHH---HHCCccccccCcceEEEcCCCeEE
Confidence 999999999999999999999988641 24588999999999999999999 677899999999999999999999
Q ss_pred EeccCCccccCCCCceeeEeeecccccccCCcccCCCCCCchhHHHHHHHHHHHHHh-CCCCccccCCCCccccHHHHHH
Q 011360 353 ISDLGLAMAIPDGYTRVLISYVLGTMAYIAPEYFQQPELSEKCDIFSFGMLLISLVR-GVPSFVFHQNGEEICSPEWLRK 431 (487)
Q Consensus 353 l~DFg~s~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DvwslG~~l~ellt-g~~pf~~~~~~~~~~~~~~~~~ 431 (487)
|+|||.+.......... .....++..|+|||.+.+..++.++||||||+++|+|++ |..||.... ..+....
T Consensus 141 l~d~g~~~~~~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~Di~s~G~~l~el~~~g~~p~~~~~------~~~~~~~ 213 (256)
T cd05114 141 VSDFGMTRYVLDDEYTS-SSGAKFPVKWSPPEVFNFSKYSSKSDVWSFGVLMWEVFTEGKMPFEKKS------NYEVVEM 213 (256)
T ss_pred ECCCCCccccCCCceec-cCCCCCchhhCChhhcccCccchhhhhHHHHHHHHHHHcCCCCCCCCCC------HHHHHHH
Confidence 99999987654332211 112235678999999998889999999999999999999 899994332 2233333
Q ss_pred HHhcCCCCCccCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCChHHHHHHHh
Q 011360 432 VMNSKNPSRAIDPRLPGNGYEKKMLHVLKIAYICTLHDPEERPNSQYVRCRLS 484 (487)
Q Consensus 432 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~~il~~L~ 484 (487)
......+. .+.. .+..+.+++.+||+.+|++|||+.++++.|.
T Consensus 214 i~~~~~~~---~~~~-------~~~~~~~li~~c~~~~p~~Rps~~~l~~~l~ 256 (256)
T cd05114 214 ISRGFRLY---RPKL-------ASMTVYEVMYSCWHEKPEGRPTFAELLRAIT 256 (256)
T ss_pred HHCCCCCC---CCCC-------CCHHHHHHHHHHccCCcccCcCHHHHHHhhC
Confidence 33222111 1111 1246889999999999999999999998873
No 80
>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor
Probab=100.00 E-value=2e-39 Score=318.20 Aligned_cols=258 Identities=21% Similarity=0.319 Sum_probs=200.2
Q ss_pred ccccccccccccccceeEEEEEecCCCC----ceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCCCC
Q 011360 191 EDCFASLEKIGSGGCGEVYKAELPGSNG----KMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQIRHRN 266 (487)
Q Consensus 191 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~----~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpn 266 (487)
..+|...+.||+|+||.||+|.+.. ++ ..||+|.+.. .........+.+|+.+++.++|||
T Consensus 6 ~~~f~~~~~lg~G~~g~Vy~~~~~~-~~~~~~~~vaiK~~~~--------------~~~~~~~~~~~~e~~~l~~l~h~n 70 (316)
T cd05108 6 ETEFKKIKVLGSGAFGTVYKGLWIP-EGEKVKIPVAIKELRE--------------ATSPKANKEILDEAYVMASVDNPH 70 (316)
T ss_pred hhhceeeeeeecCCCceEEEEEEec-CCCccceeEEEEeccc--------------cCCHHHHHHHHHHHHHHHhCCCCC
Confidence 3469999999999999999998642 33 3489998732 112234456888999999999999
Q ss_pred ccccceEEecCCeeEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeC
Q 011360 267 ILPLLAHMVRPDCHLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVLLN 346 (487)
Q Consensus 267 Iv~l~~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nill~ 346 (487)
|+++++++... ..++++||+++|+|.+++.. ....+++..+..++.|++.||+|| |++||+||||||+||+++
T Consensus 71 iv~~~g~~~~~-~~~~v~e~~~~g~l~~~l~~---~~~~~~~~~~~~~~~qi~~~L~~L---H~~~iiH~dlkp~Nill~ 143 (316)
T cd05108 71 VCRLLGICLTS-TVQLITQLMPFGCLLDYVRE---HKDNIGSQYLLNWCVQIAKGMNYL---EERRLVHRDLAARNVLVK 143 (316)
T ss_pred CCeEEEEEcCC-CceeeeecCCCCCHHHHHHh---ccccCCHHHHHHHHHHHHHHHHHH---HhcCeeccccchhheEec
Confidence 99999988764 56799999999999999874 234688889999999999999999 778999999999999999
Q ss_pred CCCCEEEeccCCccccCCCCceeeEeeecccccccCCcccCCCCCCchhHHHHHHHHHHHHHh-CCCCccccCCCCcccc
Q 011360 347 DDMEACISDLGLAMAIPDGYTRVLISYVLGTMAYIAPEYFQQPELSEKCDIFSFGMLLISLVR-GVPSFVFHQNGEEICS 425 (487)
Q Consensus 347 ~~~~~kl~DFg~s~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DvwslG~~l~ellt-g~~pf~~~~~~~~~~~ 425 (487)
.++.+||+|||+++...............++..|+|||.+.+..++.++||||||+++|||++ |..||.... .
T Consensus 144 ~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slGv~l~el~t~g~~p~~~~~------~ 217 (316)
T cd05108 144 TPQHVKITDFGLAKLLGADEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIP------A 217 (316)
T ss_pred CCCcEEEccccccccccCCCcceeccCCccceeecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCC------H
Confidence 999999999999987654333222222334678999999999999999999999999999998 999994321 1
Q ss_pred HHHHHHHHhcCCCCCccCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCChHHHHHHHhhh
Q 011360 426 PEWLRKVMNSKNPSRAIDPRLPGNGYEKKMLHVLKIAYICTLHDPEERPNSQYVRCRLSQL 486 (487)
Q Consensus 426 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~~il~~L~~l 486 (487)
.+ .......... ...++. ...++.+++.+||..+|++|||+.+++..|..+
T Consensus 218 ~~-~~~~~~~~~~-~~~~~~--------~~~~~~~li~~cl~~~p~~Rps~~~l~~~l~~~ 268 (316)
T cd05108 218 SE-ISSILEKGER-LPQPPI--------CTIDVYMIMVKCWMIDADSRPKFRELIIEFSKM 268 (316)
T ss_pred HH-HHHHHhCCCC-CCCCCC--------CCHHHHHHHHHHccCChhhCcCHHHHHHHHHHH
Confidence 12 2222222111 011111 224688999999999999999999999988764
No 81
>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept
Probab=100.00 E-value=2.4e-39 Score=315.60 Aligned_cols=263 Identities=23% Similarity=0.306 Sum_probs=206.2
Q ss_pred ccccccccccccccceeEEEEEe----cCCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccC-CCC
Q 011360 191 EDCFASLEKIGSGGCGEVYKAEL----PGSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQI-RHR 265 (487)
Q Consensus 191 ~~~~~~~~~lg~G~~g~v~~~~~----~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~hp 265 (487)
.++|.+.+.||.|+||.||++.. ...++..||+|.+.. .........+.+|+.+++++ +||
T Consensus 34 ~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~--------------~~~~~~~~~~~~E~~~l~~l~~h~ 99 (302)
T cd05055 34 RNNLSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKP--------------TAHSSEREALMSELKIMSHLGNHE 99 (302)
T ss_pred HHHeEEcceeeccCCeeEEEEEEecCCCCCceeEEEEEecCc--------------cCChHHHHHHHHHHHHHHhccCCC
Confidence 34699999999999999999974 223456899998732 11223456788999999999 899
Q ss_pred CccccceEEecCCeeEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEe
Q 011360 266 NILPLLAHMVRPDCHLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVLL 345 (487)
Q Consensus 266 nIv~l~~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nill 345 (487)
||+++++++...+..+++|||+++|+|.+++.. .....+++.++..++.|++.||.|| |++|++|+||||+||++
T Consensus 100 ~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~--~~~~~l~~~~~~~i~~~i~~~l~~l---H~~~ivH~dlkp~Nil~ 174 (302)
T cd05055 100 NIVNLLGACTIGGPILVITEYCCYGDLLNFLRR--KRESFLTLEDLLSFSYQVAKGMAFL---ASKNCIHRDLAARNVLL 174 (302)
T ss_pred CcceEEEEEecCCceEEEEEcCCCCcHHHHHHh--CCCCCCCHHHHHHHHHHHHHHHHHH---HHCCeehhhhccceEEE
Confidence 999999999999999999999999999999864 2233489999999999999999999 67789999999999999
Q ss_pred CCCCCEEEeccCCccccCCCCceeeEeeecccccccCCcccCCCCCCchhHHHHHHHHHHHHHh-CCCCccccCCCCccc
Q 011360 346 NDDMEACISDLGLAMAIPDGYTRVLISYVLGTMAYIAPEYFQQPELSEKCDIFSFGMLLISLVR-GVPSFVFHQNGEEIC 424 (487)
Q Consensus 346 ~~~~~~kl~DFg~s~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DvwslG~~l~ellt-g~~pf~~~~~~~~~~ 424 (487)
+.++.++|+|||++................++..|+|||.+.+..++.++||||||+++|+|++ |..||.....
T Consensus 175 ~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~t~g~~p~~~~~~----- 249 (302)
T cd05055 175 THGKIVKICDFGLARDIMNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSNPYPGMPV----- 249 (302)
T ss_pred cCCCeEEECCCcccccccCCCceeecCCCCcccccCCHhhhccCCCCcHhHHHHHHHHHHHHHhCCCCCcCCCCc-----
Confidence 9999999999999986654332222223346788999999998899999999999999999998 8999843221
Q ss_pred cHHHHHHHHhcCCCCCccCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCChHHHHHHHhhhC
Q 011360 425 SPEWLRKVMNSKNPSRAIDPRLPGNGYEKKMLHVLKIAYICTLHDPEERPNSQYVRCRLSQLL 487 (487)
Q Consensus 425 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~~il~~L~~ll 487 (487)
.+............ . .+. ..+..+.+++.+||+.+|++|||+.++++.|++++
T Consensus 250 -~~~~~~~~~~~~~~-~----~~~----~~~~~~~~li~~cl~~~p~~Rpt~~ell~~l~~~~ 302 (302)
T cd05055 250 -DSKFYKLIKEGYRM-A----QPE----HAPAEIYDIMKTCWDADPLKRPTFKQIVQLIGKQL 302 (302)
T ss_pred -hHHHHHHHHcCCcC-C----CCC----CCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHhhC
Confidence 11222222222111 0 111 12356889999999999999999999999999864
No 82
>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g
Probab=100.00 E-value=2.2e-39 Score=312.37 Aligned_cols=251 Identities=28% Similarity=0.368 Sum_probs=195.3
Q ss_pred cccccceeEEEEEecCCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCCCCccccceEEecCCe
Q 011360 200 IGSGGCGEVYKAELPGSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQIRHRNILPLLAHMVRPDC 279 (487)
Q Consensus 200 lg~G~~g~v~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~ 279 (487)
||.|+||.||++.. ..+++.||+|++... ..........+..|+.+++.++||||+++++++.....
T Consensus 1 lg~G~~g~Vy~~~~-~~~~~~~avK~~~~~------------~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~ 67 (280)
T cd05608 1 LGKGGFGEVSACQM-RATGKLYACKKLNKK------------RLKKRKGYEGAMVEKRILAKVHSRFIVSLAYAFQTKTD 67 (280)
T ss_pred CCCCCceeEEEEEE-ccCCcEEEEEeeeHH------------HHhhhHHHHHHHHHHHHHHhCCCCcEeeeeEEEcCCCe
Confidence 69999999999975 457899999987320 11112234567789999999999999999999999999
Q ss_pred eEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCCEEEeccCCc
Q 011360 280 HLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVLLNDDMEACISDLGLA 359 (487)
Q Consensus 280 ~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nill~~~~~~kl~DFg~s 359 (487)
.|+||||+++|+|.+++.........+++..+..++.|++.||.|| |++||+||||||+||+++.++.++|+|||++
T Consensus 68 ~~lv~e~~~~g~L~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~l---H~~~i~H~dlkp~Nili~~~~~~~l~dfg~~ 144 (280)
T cd05608 68 LCLVMTIMNGGDLRYHIYNVDEENPGFPEPRACFYTAQIISGLEHL---HQRRIIYRDLKPENVLLDNDGNVRISDLGLA 144 (280)
T ss_pred EEEEEeCCCCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHH---HHCCcccCCCCHHHEEECCCCCEEEeeCccc
Confidence 9999999999999988865444456789999999999999999999 6788999999999999999999999999999
Q ss_pred cccCCCCceeeEeeecccccccCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCccccCCCCccccHHHHHHHHhcCCCC
Q 011360 360 MAIPDGYTRVLISYVLGTMAYIAPEYFQQPELSEKCDIFSFGMLLISLVRGVPSFVFHQNGEEICSPEWLRKVMNSKNPS 439 (487)
Q Consensus 360 ~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DvwslG~~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 439 (487)
......... .....||+.|+|||++.+..++.++||||||+++|+|++|..||....... ............ .
T Consensus 145 ~~~~~~~~~--~~~~~g~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~--~~~~~~~~~~~~---~ 217 (280)
T cd05608 145 VELKDGQSK--TKGYAGTPGFMAPELLQGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKV--ENKELKQRILND---S 217 (280)
T ss_pred eecCCCCcc--ccccCCCcCccCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCcch--hHHHHHHhhccc---C
Confidence 766443322 133568999999999999999999999999999999999999995433211 111111111111 0
Q ss_pred CccCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCC-----ChHHHHH
Q 011360 440 RAIDPRLPGNGYEKKMLHVLKIAYICTLHDPEERP-----NSQYVRC 481 (487)
Q Consensus 440 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RP-----s~~~il~ 481 (487)
.. ++ ...+..+.+++.+||+.||++|| |++++++
T Consensus 218 ~~----~~----~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~~l~ 256 (280)
T cd05608 218 VT----YP----DKFSPASKSFCEALLAKDPEKRLGFRDGNCDGLRT 256 (280)
T ss_pred CC----Cc----ccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHhc
Confidence 11 11 12335688999999999999999 5666664
No 83
>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po
Probab=100.00 E-value=1.8e-39 Score=326.68 Aligned_cols=256 Identities=22% Similarity=0.343 Sum_probs=196.3
Q ss_pred ccccccccccccceeEEEEEecCCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCCCCccccce
Q 011360 193 CFASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQIRHRNILPLLA 272 (487)
Q Consensus 193 ~~~~~~~lg~G~~g~v~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~ 272 (487)
.|.+++.||+|+||.||+|+. ..++..||+|++.. ...........+.+|+.++..++||||+++++
T Consensus 2 ~f~~~~~LG~G~~g~Vy~~~~-~~~~~~~aiK~i~~------------~~~~~~~~~~~~~~E~~il~~l~h~~iv~l~~ 68 (381)
T cd05626 2 MFVKIKTLGIGAFGEVCLACK-VDTHALYAMKTLRK------------KDVLNRNQVAHVKAERDILAEADNEWVVKLYY 68 (381)
T ss_pred CceEEEEEeecCCEEEEEEEE-CCCCCEEEEEEEEH------------HHhhhhHHHHHHHHHHHHHHhcCCCCeeeeEE
Confidence 488899999999999999975 46889999998842 11122344567889999999999999999999
Q ss_pred EEecCCeeEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCCEE
Q 011360 273 HMVRPDCHLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVLLNDDMEAC 352 (487)
Q Consensus 273 ~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nill~~~~~~k 352 (487)
++.+.+.+|+||||+++|+|.+++.. ...+++..+..++.|++.||.|| |+.||+||||||+|||++.++.+|
T Consensus 69 ~~~~~~~~~lv~E~~~gg~L~~~l~~----~~~~~e~~~~~~~~qi~~aL~~L---H~~givHrDlKp~Nili~~~~~~k 141 (381)
T cd05626 69 SFQDKDNLYFVMDYIPGGDMMSLLIR----MEVFPEVLARFYIAELTLAIESV---HKMGFIHRDIKPDNILIDLDGHIK 141 (381)
T ss_pred EEecCCEEEEEEecCCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHH---HhCCeeecCCcHHHEEECCCCCEE
Confidence 99999999999999999999999864 45688899999999999999999 778899999999999999999999
Q ss_pred EeccCCccccCCCCc---------------------------------------------eeeEeeecccccccCCcccC
Q 011360 353 ISDLGLAMAIPDGYT---------------------------------------------RVLISYVLGTMAYIAPEYFQ 387 (487)
Q Consensus 353 l~DFg~s~~~~~~~~---------------------------------------------~~~~~~~~gt~~y~aPE~l~ 387 (487)
|+|||++........ ........||+.|+|||++.
T Consensus 142 L~DFGl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~ 221 (381)
T cd05626 142 LTDFGLCTGFRWTHNSKYYQKGSHIRQDSMEPSDLWDDVSNCRCGDRLKTLEQRATKQHQRCLAHSLVGTPNYIAPEVLL 221 (381)
T ss_pred EeeCcCCcccccccccccccccccccccccCcccccccccccccccccchhhccccccccccccccccCCccccCHHHHc
Confidence 999999754311000 00012346999999999999
Q ss_pred CCCCCchhHHHHHHHHHHHHHhCCCCccccCCCCccccHHHHHHHHhcCCCCCccCCCCCCCCcHHHHHHHHHHHhh--c
Q 011360 388 QPELSEKCDIFSFGMLLISLVRGVPSFVFHQNGEEICSPEWLRKVMNSKNPSRAIDPRLPGNGYEKKMLHVLKIAYI--C 465 (487)
Q Consensus 388 ~~~~~~~~DvwslG~~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~--c 465 (487)
+..++.++|||||||++|||+||..||..... .+........... .. ++.. ...+.++.+++.+ |
T Consensus 222 ~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~------~~~~~~i~~~~~~-~~----~~~~--~~~s~~~~dli~~ll~ 288 (381)
T cd05626 222 RKGYTQLCDWWSVGVILFEMLVGQPPFLAPTP------TETQLKVINWENT-LH----IPPQ--VKLSPEAVDLITKLCC 288 (381)
T ss_pred CCCCCCccceeehhhHHHHHHhCCCCCcCCCH------HHHHHHHHccccc-cC----CCCC--CCCCHHHHHHHHHHcc
Confidence 88899999999999999999999999954332 1122222211111 01 1110 1122456677776 5
Q ss_pred cCCCCCCCCChHHHHH
Q 011360 466 TLHDPEERPNSQYVRC 481 (487)
Q Consensus 466 l~~~P~~RPs~~~il~ 481 (487)
+..+|..|||+.+++.
T Consensus 289 ~~~~~~~R~~~~~~l~ 304 (381)
T cd05626 289 SAEERLGRNGADDIKA 304 (381)
T ss_pred CcccccCCCCHHHHhc
Confidence 5666777999999875
No 84
>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla
Probab=100.00 E-value=9.7e-40 Score=316.41 Aligned_cols=261 Identities=22% Similarity=0.338 Sum_probs=191.4
Q ss_pred ccccccccccccceeEEEEEecCCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhc---cCCCCCccc
Q 011360 193 CFASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITAS---QIRHRNILP 269 (487)
Q Consensus 193 ~~~~~~~lg~G~~g~v~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~---~l~hpnIv~ 269 (487)
+|.+.+.||.|+||.||+|.....++..||+|.+..... .......+.+|+.++. .+.||||++
T Consensus 2 ~Y~~~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~-------------~~~~~~~~~~e~~~l~~l~~~~hpniv~ 68 (290)
T cd07862 2 QYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTG-------------EEGMPLSTIREVAVLRHLETFEHPNVVR 68 (290)
T ss_pred CcceeeEeccCCCeEEEEEEEcCCCCeEEEEEEEecccC-------------CCCchHHHHHHHHHHHhhcccCCCCcce
Confidence 588999999999999999986555678899998743211 1111123344555544 457999999
Q ss_pred cceEEe-----cCCeeEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEE
Q 011360 270 LLAHMV-----RPDCHLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVL 344 (487)
Q Consensus 270 l~~~~~-----~~~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nil 344 (487)
+++++. ....+++||||+. ++|.+++.. .....+++..+..++.|++.||.|| |++||+||||||+|||
T Consensus 69 ~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~--~~~~~~~~~~~~~i~~qi~~aL~~l---H~~~iiH~dlkp~Nil 142 (290)
T cd07862 69 LFDVCTVSRTDRETKLTLVFEHVD-QDLTTYLDK--VPEPGVPTETIKDMMFQLLRGLDFL---HSHRVVHRDLKPQNIL 142 (290)
T ss_pred EEEEEecccCCCCCcEEEEEccCC-CCHHHHHHh--CCCCCCCHHHHHHHHHHHHHHHHHH---HHCCeeeCCCCHHHEE
Confidence 999875 2456899999995 699999875 2344588999999999999999999 7788999999999999
Q ss_pred eCCCCCEEEeccCCccccCCCCceeeEeeecccccccCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCccccCCCCccc
Q 011360 345 LNDDMEACISDLGLAMAIPDGYTRVLISYVLGTMAYIAPEYFQQPELSEKCDIFSFGMLLISLVRGVPSFVFHQNGEEIC 424 (487)
Q Consensus 345 l~~~~~~kl~DFg~s~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DvwslG~~l~elltg~~pf~~~~~~~~~~ 424 (487)
++.++.+||+|||++....... ......||+.|+|||++.+..++.++|||||||++|||++|.+||......
T Consensus 143 ~~~~~~~kl~Dfg~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~~~---- 215 (290)
T cd07862 143 VTSSGQIKLADFGLARIYSFQM---ALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDV---- 215 (290)
T ss_pred EcCCCCEEEccccceEeccCCc---ccccccccccccChHHHhCCCCCCccchHHHHHHHHHHHcCCCCcCCCCHH----
Confidence 9999999999999997654331 123456899999999998889999999999999999999999999544321
Q ss_pred cHHHHHHHHhcC---CC----------CCccCCCCCC---CCcHHHHHHHHHHHhhccCCCCCCCCChHHHHH
Q 011360 425 SPEWLRKVMNSK---NP----------SRAIDPRLPG---NGYEKKMLHVLKIAYICTLHDPEERPNSQYVRC 481 (487)
Q Consensus 425 ~~~~~~~~~~~~---~~----------~~~~~~~~~~---~~~~~~~~~l~~li~~cl~~~P~~RPs~~~il~ 481 (487)
+....+.... .+ ...+.+..+. .........+.+++.+||+.||++|||+.++++
T Consensus 216 --~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~ 286 (290)
T cd07862 216 --DQLGKILDVIGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALS 286 (290)
T ss_pred --HHHHHHHHHhCCCChhhchhhhcccchhccCCCCCCHHHHccCCCHHHHHHHHHHhccCchhcCCHHHHhc
Confidence 1111121110 00 0000000000 000123356789999999999999999999975
No 85
>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N. Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved
Probab=100.00 E-value=1.7e-39 Score=319.80 Aligned_cols=248 Identities=24% Similarity=0.307 Sum_probs=192.4
Q ss_pred cccccccccccceeEEEEEecCCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHH---hccCCCCCcccc
Q 011360 194 FASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIIT---ASQIRHRNILPL 270 (487)
Q Consensus 194 ~~~~~~lg~G~~g~v~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~---l~~l~hpnIv~l 270 (487)
|.+.+.||.|+||.||+|.. ..+++.||||++... ..........+..|..+ +..++||||+++
T Consensus 1 y~i~~~lg~G~~g~Vy~~~~-~~~~~~~aiK~~~~~------------~~~~~~~~~~l~~e~~~~~~~~~l~hp~i~~~ 67 (324)
T cd05589 1 FRCLAVLGRGHFGKVLLAEY-KKTGELYAIKALKKG------------DIIARDEVESLMCEKRIFETANSERHPFLVNL 67 (324)
T ss_pred CeEEEEEeecCCEEEEEEEE-CCCCCEEEEEEEEHH------------HhhhhhHHHHHHHHHHHHHhccccCCCChhce
Confidence 56788999999999999975 457899999988421 11112233445555544 567789999999
Q ss_pred ceEEecCCeeEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCC
Q 011360 271 LAHMVRPDCHLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVLLNDDME 350 (487)
Q Consensus 271 ~~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nill~~~~~ 350 (487)
++++...+..|+||||+++|+|..++. ...+++..+..++.|++.||.|| |++||+||||||+||+++.++.
T Consensus 68 ~~~~~~~~~~~lv~E~~~~~~L~~~~~-----~~~l~~~~~~~~~~qi~~al~~l---H~~~ivHrdlkp~Nill~~~~~ 139 (324)
T cd05589 68 FACFQTEDHVCFVMEYAAGGDLMMHIH-----TDVFSEPRAVFYAACVVLGLQYL---HENKIVYRDLKLDNLLLDTEGF 139 (324)
T ss_pred eeEEEcCCEEEEEEcCCCCCcHHHHhh-----cCCCCHHHHHHHHHHHHHHHHHH---HhCCeEecCCCHHHeEECCCCc
Confidence 999999999999999999999988875 24689999999999999999999 7788999999999999999999
Q ss_pred EEEeccCCccccCCCCceeeEeeecccccccCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCccccCCCCccccHHHHH
Q 011360 351 ACISDLGLAMAIPDGYTRVLISYVLGTMAYIAPEYFQQPELSEKCDIFSFGMLLISLVRGVPSFVFHQNGEEICSPEWLR 430 (487)
Q Consensus 351 ~kl~DFg~s~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DvwslG~~l~elltg~~pf~~~~~~~~~~~~~~~~ 430 (487)
+||+|||++........ ......|++.|+|||.+.+..++.++|||||||++|+|++|..||..... .+...
T Consensus 140 ~kL~Dfg~~~~~~~~~~--~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~G~~pf~~~~~------~~~~~ 211 (324)
T cd05589 140 VKIADFGLCKEGMGFGD--RTSTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIYEMLVGESPFPGDDE------EEVFD 211 (324)
T ss_pred EEeCcccCCccCCCCCC--cccccccCccccCHhHhcCCCCCcccchhhHHHHHHHHHhCCCCCCCCCH------HHHHH
Confidence 99999999865322211 12346689999999999998999999999999999999999999954321 22223
Q ss_pred HHHhcCCCCCccCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCC-----ChHHHHH
Q 011360 431 KVMNSKNPSRAIDPRLPGNGYEKKMLHVLKIAYICTLHDPEERP-----NSQYVRC 481 (487)
Q Consensus 431 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RP-----s~~~il~ 481 (487)
.+... .+. .+.. .+..+.+++.+||+.||++|| ++.++++
T Consensus 212 ~i~~~-~~~--~p~~--------~~~~~~~li~~~L~~dP~~R~~~~~~~~~~l~~ 256 (324)
T cd05589 212 SIVND-EVR--YPRF--------LSREAISIMRRLLRRNPERRLGSGEKDAEDVKK 256 (324)
T ss_pred HHHhC-CCC--CCCC--------CCHHHHHHHHHHhhcCHhHcCCCCCCCHHHHhh
Confidence 23222 111 1111 234588999999999999999 4666654
No 86
>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an
Probab=100.00 E-value=1.1e-39 Score=318.03 Aligned_cols=262 Identities=24% Similarity=0.357 Sum_probs=195.2
Q ss_pred ccccccccccccccceeEEEEEecCCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCCCCcccc
Q 011360 191 EDCFASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQIRHRNILPL 270 (487)
Q Consensus 191 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l 270 (487)
.++|.+.+.||.|+||.||+|+. ..+++.||+|++.... .......+.+|+.+++.++||||+++
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~~~~aiK~~~~~~--------------~~~~~~~~~~E~~~l~~l~h~niv~~ 68 (303)
T cd07869 4 ADSYEKLEKLGEGSYATVYKGKS-KVNGKLVALKVIRLQE--------------EEGTPFTAIREASLLKGLKHANIVLL 68 (303)
T ss_pred cccceEeeeEEecCCEEEEEEEE-CCCCCEEEEEEecccc--------------ccccchhHHHHHHHHhhCCCCCcCeE
Confidence 45799999999999999999975 4578899999874211 11122356789999999999999999
Q ss_pred ceEEecCCeeEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCC
Q 011360 271 LAHMVRPDCHLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVLLNDDME 350 (487)
Q Consensus 271 ~~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nill~~~~~ 350 (487)
++++.+.+..++||||+. ++|.+++.. ....++...+..++.|++.||.|| |++||+||||||+||+++.++.
T Consensus 69 ~~~~~~~~~~~lv~e~~~-~~l~~~~~~---~~~~~~~~~~~~~~~qi~~al~~l---H~~~ivH~dlkp~Nill~~~~~ 141 (303)
T cd07869 69 HDIIHTKETLTLVFEYVH-TDLCQYMDK---HPGGLHPENVKLFLFQLLRGLSYI---HQRYILHRDLKPQNLLISDTGE 141 (303)
T ss_pred EEEEecCCeEEEEEECCC-cCHHHHHHh---CCCCCCHHHHHHHHHHHHHHHHHH---HHCCeecCCCCHHHEEECCCCC
Confidence 999999999999999995 688887763 245688889999999999999999 7788999999999999999999
Q ss_pred EEEeccCCccccCCCCceeeEeeecccccccCCcccCC-CCCCchhHHHHHHHHHHHHHhCCCCccccCCCCccccHHHH
Q 011360 351 ACISDLGLAMAIPDGYTRVLISYVLGTMAYIAPEYFQQ-PELSEKCDIFSFGMLLISLVRGVPSFVFHQNGEEICSPEWL 429 (487)
Q Consensus 351 ~kl~DFg~s~~~~~~~~~~~~~~~~gt~~y~aPE~l~~-~~~~~~~DvwslG~~l~elltg~~pf~~~~~~~~~~~~~~~ 429 (487)
+||+|||++........ ......+|+.|+|||++.+ ..++.++|||||||++|+|++|..||....+. ....
T Consensus 142 ~kl~Dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~-----~~~~ 214 (303)
T cd07869 142 LKLADFGLARAKSVPSH--TYSNEVVTLWYRPPDVLLGSTEYSTCLDMWGVGCIFVEMIQGVAAFPGMKDI-----QDQL 214 (303)
T ss_pred EEECCCCcceeccCCCc--cCCCCcccCCCCChHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCccH-----HHHH
Confidence 99999999875432211 1123458999999998865 46889999999999999999999999543221 1111
Q ss_pred HHHHh-cCCCCC-c---------c-CCCC----CCCCc-----HHHHHHHHHHHhhccCCCCCCCCChHHHHH
Q 011360 430 RKVMN-SKNPSR-A---------I-DPRL----PGNGY-----EKKMLHVLKIAYICTLHDPEERPNSQYVRC 481 (487)
Q Consensus 430 ~~~~~-~~~~~~-~---------~-~~~~----~~~~~-----~~~~~~l~~li~~cl~~~P~~RPs~~~il~ 481 (487)
..... ...+.. . . ...+ +.... ...+.++.+++.+||+.||++|||++++++
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dp~~R~s~~~~l~ 287 (303)
T cd07869 215 ERIFLVLGTPNEDTWPGVHSLPHFKPERFTLYSPKNLRQAWNKLSYVNHAEDLASKLLQCFPKNRLSAQAALS 287 (303)
T ss_pred HHHHHHhCCCChhhccchhhccccccccccccCCccHHHHhhccCCChHHHHHHHHHhccCchhccCHHHHhc
Confidence 11110 000000 0 0 0000 00000 011246789999999999999999999975
No 87
>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D
Probab=100.00 E-value=2.3e-39 Score=325.97 Aligned_cols=269 Identities=23% Similarity=0.312 Sum_probs=206.9
Q ss_pred HhhhccccccccccccccceeEEEEEecC----CCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccC
Q 011360 187 FLKKEDCFASLEKIGSGGCGEVYKAELPG----SNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQI 262 (487)
Q Consensus 187 ~~~~~~~~~~~~~lg~G~~g~v~~~~~~~----~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l 262 (487)
|....++|.+.+.||.|+||.||+|++.. .++..||+|++... ........+.+|+.++..+
T Consensus 32 ~~~~~~~~~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~--------------~~~~~~~~~~~E~~~l~~l 97 (401)
T cd05107 32 WEMPRDNLVLGRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKST--------------ARSSEKQALMSELKIMSHL 97 (401)
T ss_pred ceecHHHeehhhhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCC--------------CChhHHHHHHHHHHHHHhc
Confidence 44455568999999999999999998632 34568999998431 1122344678899999999
Q ss_pred C-CCCccccceEEecCCeeEEEEEecCCCCHHHHHhhhhc----------------------------------------
Q 011360 263 R-HRNILPLLAHMVRPDCHLLVYEFMKNGSLQDILDDVSR---------------------------------------- 301 (487)
Q Consensus 263 ~-hpnIv~l~~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~---------------------------------------- 301 (487)
. ||||+++++++...+..++|||||++|+|.+++.....
T Consensus 98 ~~H~niv~~~~~~~~~~~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (401)
T cd05107 98 GPHLNIVNLLGACTKGGPIYIITEYCRYGDLVDYLHRNKHTFLQYYLDKNRDDGSLISGGSTPLSQRKSHVSLGSESDGG 177 (401)
T ss_pred CCCCCeEEEEEEEccCCCcEEEEeccCCCcHHHHHHhccccchhhhcccccccccccccccccccccccchhhhhccCcc
Confidence 6 99999999999999999999999999999999964211
Q ss_pred ------------------------------------------------------CCCCCChHHHHHHHHHHHHHHHHHHh
Q 011360 302 ------------------------------------------------------GRRELDWPSRHRIALGVASGLEYLHM 327 (487)
Q Consensus 302 ------------------------------------------------------~~~~l~~~~~~~i~~qi~~~L~~Lh~ 327 (487)
....+++..+..++.|++.||.||
T Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~L-- 255 (401)
T cd05107 178 YMDMSKDESADYVPMQDMKGTVKYADIESSNYESPYDQYLPSAPERTRRDTLINESPALSYMDLVGFSYQVANGMEFL-- 255 (401)
T ss_pred ccccCCccccCccchhcchhhhhhhhhhccCcCCchhhhhcccCCCcchhhhhcCCCCCCHHHHHHHHHHHHHHHHHH--
Confidence 113467778899999999999999
Q ss_pred cCCCCeeecCCCCCCEEeCCCCCEEEeccCCccccCCCCceeeEeeecccccccCCcccCCCCCCchhHHHHHHHHHHHH
Q 011360 328 YHSASIIHGDIKPRNVLLNDDMEACISDLGLAMAIPDGYTRVLISYVLGTMAYIAPEYFQQPELSEKCDIFSFGMLLISL 407 (487)
Q Consensus 328 ~h~~givH~Dlkp~Nill~~~~~~kl~DFg~s~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DvwslG~~l~el 407 (487)
|+.|++||||||+|||++.++.+||+|||+++...............+++.|+|||.+.+..++.++||||||+++|||
T Consensus 256 -H~~~ivHrdlkp~NiLl~~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvil~e~ 334 (401)
T cd05107 256 -ASKNCVHRDLAARNVLICEGKLVKICDFGLARDIMRDSNYISKGSTFLPLKWMAPESIFNNLYTTLSDVWSFGILLWEI 334 (401)
T ss_pred -hcCCcCcccCCcceEEEeCCCEEEEEecCcceecccccccccCCCcCCCCceeChHHhcCCCCCcHhHHHHHHHHHHHH
Confidence 7788999999999999999999999999999765332221111233467899999999988899999999999999999
Q ss_pred Hh-CCCCccccCCCCccccHHHHHHHHhcCCCCCccCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCChHHHHHHHhhh
Q 011360 408 VR-GVPSFVFHQNGEEICSPEWLRKVMNSKNPSRAIDPRLPGNGYEKKMLHVLKIAYICTLHDPEERPNSQYVRCRLSQL 486 (487)
Q Consensus 408 lt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~~il~~L~~l 486 (487)
++ |..||..... .+........+.. +..+. ..+.++.+++.+||+.+|.+||++.+|+..|+.+
T Consensus 335 l~~g~~P~~~~~~------~~~~~~~~~~~~~-----~~~p~----~~~~~l~~li~~cl~~~P~~RPs~~ell~~L~~~ 399 (401)
T cd05107 335 FTLGGTPYPELPM------NEQFYNAIKRGYR-----MAKPA----HASDEIYEIMQKCWEEKFEIRPDFSQLVHLVGDL 399 (401)
T ss_pred HHcCCCCCCCCCc------hHHHHHHHHcCCC-----CCCCC----CCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHH
Confidence 98 8889843321 1222222222211 11111 1235688999999999999999999999999987
Q ss_pred C
Q 011360 487 L 487 (487)
Q Consensus 487 l 487 (487)
+
T Consensus 400 ~ 400 (401)
T cd05107 400 L 400 (401)
T ss_pred h
Confidence 4
No 88
>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes. Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular
Probab=100.00 E-value=3.1e-39 Score=306.29 Aligned_cols=251 Identities=25% Similarity=0.337 Sum_probs=196.1
Q ss_pred cccccccceeEEEEEecCCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCCCCccccceEEecC
Q 011360 198 EKIGSGGCGEVYKAELPGSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQIRHRNILPLLAHMVRP 277 (487)
Q Consensus 198 ~~lg~G~~g~v~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~ 277 (487)
+.||.|+||.||+|+. ..++..+|+|.+.. .........+.+|+.+++.++||||+++++++...
T Consensus 1 ~~lg~g~~g~vy~~~~-~~~~~~~a~k~~~~--------------~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~ 65 (252)
T cd05084 1 ERIGRGNFGEVFSGRL-RADNTPVAVKSCRE--------------TLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQK 65 (252)
T ss_pred CccCcccCccEEEEEE-ecCCceEEEEecCc--------------cCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEcCC
Confidence 3689999999999975 45788999997632 11233446788899999999999999999999999
Q ss_pred CeeEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCCEEEeccC
Q 011360 278 DCHLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVLLNDDMEACISDLG 357 (487)
Q Consensus 278 ~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nill~~~~~~kl~DFg 357 (487)
...++||||+++++|.+++.. ....+++..++.++.|++.||.|| |++|++||||+|+||+++.++.+||+|||
T Consensus 66 ~~~~lv~e~~~~~~L~~~~~~---~~~~~~~~~~~~~~~qi~~~L~~l---H~~~i~H~dl~p~nil~~~~~~~kl~dfg 139 (252)
T cd05084 66 QPIYIVMELVQGGDFLTFLRT---EGPRLKVKELIQMVENAAAGMEYL---ESKHCIHRDLAARNCLVTEKNVLKISDFG 139 (252)
T ss_pred CCeEEEEeeccCCcHHHHHHh---CCCCCCHHHHHHHHHHHHHHHHHH---HhCCccccccchheEEEcCCCcEEECccc
Confidence 999999999999999999863 234688999999999999999999 78889999999999999999999999999
Q ss_pred CccccCCCCceeeEeeecccccccCCcccCCCCCCchhHHHHHHHHHHHHHh-CCCCccccCCCCccccHHHHHHHHhcC
Q 011360 358 LAMAIPDGYTRVLISYVLGTMAYIAPEYFQQPELSEKCDIFSFGMLLISLVR-GVPSFVFHQNGEEICSPEWLRKVMNSK 436 (487)
Q Consensus 358 ~s~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DvwslG~~l~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~ 436 (487)
++.................+..|+|||.+.+..++.++||||||+++|+|++ |..||..... ..........
T Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~e~~~~~~~p~~~~~~-------~~~~~~~~~~ 212 (252)
T cd05084 140 MSREEEDGVYASTGGMKQIPVKWTAPEALNYGRYSSESDVWSFGILLWEAFSLGAVPYANLSN-------QQTREAIEQG 212 (252)
T ss_pred cCcccccccccccCCCCCCceeecCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccCH-------HHHHHHHHcC
Confidence 9876543221111111223567999999998899999999999999999998 8888843221 1122222221
Q ss_pred CCCCccCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCChHHHHHHHhh
Q 011360 437 NPSRAIDPRLPGNGYEKKMLHVLKIAYICTLHDPEERPNSQYVRCRLSQ 485 (487)
Q Consensus 437 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~~il~~L~~ 485 (487)
... . .+. ..+..+.+++.+||+.+|++|||+.++.+.|+.
T Consensus 213 ~~~-~----~~~----~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~~ 252 (252)
T cd05084 213 VRL-P----CPE----LCPDAVYRLMERCWEYDPGQRPSFSTVHQELQS 252 (252)
T ss_pred CCC-C----Ccc----cCCHHHHHHHHHHcCCChhhCcCHHHHHHHHhC
Confidence 111 1 111 123568899999999999999999999999863
No 89
>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu
Probab=100.00 E-value=2.9e-39 Score=309.91 Aligned_cols=262 Identities=23% Similarity=0.372 Sum_probs=202.9
Q ss_pred cccccccccccceeEEEEEecCC--CCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCCCCccccc
Q 011360 194 FASLEKIGSGGCGEVYKAELPGS--NGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQIRHRNILPLL 271 (487)
Q Consensus 194 ~~~~~~lg~G~~g~v~~~~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~ 271 (487)
|.+.+.||.|+||.||.|.+... .+..||+|++.. ..........+..|+..++.++||||++++
T Consensus 1 ~~~~~~lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~-------------~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~ 67 (273)
T cd05035 1 LKLGKILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKL-------------DIHTYSEIEEFLSEAACMKDFDHPNVMKLI 67 (273)
T ss_pred CccccccCcCCCceEEEEEEecCCCCcceEEEEEecc-------------CcCCHHHHHHHHHHHHHHHhCCCCCeeeEE
Confidence 45678999999999999986432 347899998742 112233456788999999999999999999
Q ss_pred eEEecCCe------eEEEEEecCCCCHHHHHhhhhc--CCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCE
Q 011360 272 AHMVRPDC------HLLVYEFMKNGSLQDILDDVSR--GRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNV 343 (487)
Q Consensus 272 ~~~~~~~~------~~lv~E~~~~gsL~~~l~~~~~--~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Ni 343 (487)
+++..... .+++|||+++|+|..++..... ....+++..+..++.|++.||.|| |+.|++||||||+||
T Consensus 68 ~~~~~~~~~~~~~~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~l---H~~~i~H~dlkp~Ni 144 (273)
T cd05035 68 GVCFEASSLQKIPKPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYL---SNRNFIHRDLAARNC 144 (273)
T ss_pred eeeccCCccccCcccEEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHH---HhCCeeccccchheE
Confidence 98866544 7899999999999999865322 234689999999999999999999 677899999999999
Q ss_pred EeCCCCCEEEeccCCccccCCCCceeeEeeecccccccCCcccCCCCCCchhHHHHHHHHHHHHHh-CCCCccccCCCCc
Q 011360 344 LLNDDMEACISDLGLAMAIPDGYTRVLISYVLGTMAYIAPEYFQQPELSEKCDIFSFGMLLISLVR-GVPSFVFHQNGEE 422 (487)
Q Consensus 344 ll~~~~~~kl~DFg~s~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DvwslG~~l~ellt-g~~pf~~~~~~~~ 422 (487)
++++++.+||+|||+++...............++..|+|||.+.+..++.++||||||+++|||++ |.+||....+
T Consensus 145 l~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~SlG~il~el~~~g~~p~~~~~~--- 221 (273)
T cd05035 145 MLREDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGQTPYPGVEN--- 221 (273)
T ss_pred EECCCCeEEECCccceeeccccccccccccccCCccccCHhhcccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCH---
Confidence 999999999999999987644332211122335678999999988889999999999999999999 8899843321
Q ss_pred cccHHHHHHHHhcCCCCCccCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCChHHHHHHHhhhC
Q 011360 423 ICSPEWLRKVMNSKNPSRAIDPRLPGNGYEKKMLHVLKIAYICTLHDPEERPNSQYVRCRLSQLL 487 (487)
Q Consensus 423 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~~il~~L~~ll 487 (487)
.+..........+. .+. ..+..+.+++.+||+.||++|||+.++++.|++++
T Consensus 222 ---~~~~~~~~~~~~~~------~~~----~~~~~~~~li~~~l~~~p~~Rp~~~e~~~~l~~~~ 273 (273)
T cd05035 222 ---HEIYDYLRHGNRLK------QPE----DCLDELYDLMYSCWRADPKDRPTFTKLREVLENIL 273 (273)
T ss_pred ---HHHHHHHHcCCCCC------CCc----CCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhhC
Confidence 22333232222111 111 22356899999999999999999999999999874
No 90
>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n
Probab=100.00 E-value=3.7e-39 Score=312.58 Aligned_cols=260 Identities=21% Similarity=0.325 Sum_probs=204.6
Q ss_pred ccccccccccccceeEEEEEecC----CCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCCCCcc
Q 011360 193 CFASLEKIGSGGCGEVYKAELPG----SNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQIRHRNIL 268 (487)
Q Consensus 193 ~~~~~~~lg~G~~g~v~~~~~~~----~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv 268 (487)
+|.+.+.||.|+||.||+|++.. .++..+++|.+.. ........+.+|+.+++.++||||+
T Consensus 6 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~---------------~~~~~~~~~~~e~~~l~~l~h~~i~ 70 (291)
T cd05094 6 DIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKD---------------PTLAARKDFQREAELLTNLQHEHIV 70 (291)
T ss_pred HeEEeeeecccCCCeEEEeEeeccCCCCcceeeEEEecCC---------------ccHHHHHHHHHHHHHHhcCCCCCcc
Confidence 48888999999999999997532 3456788887632 1122345678899999999999999
Q ss_pred ccceEEecCCeeEEEEEecCCCCHHHHHhhhhc------------CCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeec
Q 011360 269 PLLAHMVRPDCHLLVYEFMKNGSLQDILDDVSR------------GRRELDWPSRHRIALGVASGLEYLHMYHSASIIHG 336 (487)
Q Consensus 269 ~l~~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~------------~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~ 336 (487)
++++++...+..++||||+++++|.+++..... ....+++..++.++.|++.||+|| |++|++||
T Consensus 71 ~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~l---H~~~i~H~ 147 (291)
T cd05094 71 KFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYL---ASQHFVHR 147 (291)
T ss_pred eEEEEEccCCceEEEEecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHH---HhCCeeec
Confidence 999999999999999999999999999975321 123578999999999999999999 78889999
Q ss_pred CCCCCCEEeCCCCCEEEeccCCccccCCCCceeeEeeecccccccCCcccCCCCCCchhHHHHHHHHHHHHHh-CCCCcc
Q 011360 337 DIKPRNVLLNDDMEACISDLGLAMAIPDGYTRVLISYVLGTMAYIAPEYFQQPELSEKCDIFSFGMLLISLVR-GVPSFV 415 (487)
Q Consensus 337 Dlkp~Nill~~~~~~kl~DFg~s~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DvwslG~~l~ellt-g~~pf~ 415 (487)
||||+||+++.++.++|+|||++................++..|+|||++.+..++.++||||||+++|+|+| |..||.
T Consensus 148 dlkp~Nil~~~~~~~~l~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~ 227 (291)
T cd05094 148 DLATRNCLVGANLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWF 227 (291)
T ss_pred ccCcceEEEccCCcEEECCCCcccccCCCceeecCCCCCcceeecChHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCC
Confidence 9999999999999999999999976544332222233456788999999998899999999999999999999 999984
Q ss_pred ccCCCCccccHHHHHHHHhcCCCCCccCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCChHHHHHHHhhh
Q 011360 416 FHQNGEEICSPEWLRKVMNSKNPSRAIDPRLPGNGYEKKMLHVLKIAYICTLHDPEERPNSQYVRCRLSQL 486 (487)
Q Consensus 416 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~~il~~L~~l 486 (487)
.... .+..... ........ .. ..+..+.+++.+||+.+|++|||+.+|++.|+++
T Consensus 228 ~~~~------~~~~~~~-~~~~~~~~-~~--------~~~~~~~~li~~~l~~~P~~Rpt~~~v~~~l~~~ 282 (291)
T cd05094 228 QLSN------TEVIECI-TQGRVLER-PR--------VCPKEVYDIMLGCWQREPQQRLNIKEIYKILHAL 282 (291)
T ss_pred CCCH------HHHHHHH-hCCCCCCC-Cc--------cCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHH
Confidence 3322 1222222 22221111 11 1235688999999999999999999999999876
No 91
>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]
Probab=100.00 E-value=8.3e-41 Score=311.04 Aligned_cols=258 Identities=26% Similarity=0.368 Sum_probs=199.7
Q ss_pred ccccccccccccceeEEEEEecCCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCCCCccccce
Q 011360 193 CFASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQIRHRNILPLLA 272 (487)
Q Consensus 193 ~~~~~~~lg~G~~g~v~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~ 272 (487)
.|.-.+.+|.|+||.||.|... .+++.||||++-... +--.+|+++|+.+.|||||++..
T Consensus 25 ~~~~~~liG~GsFg~Vyq~~~~-e~~~~vAIKKv~~d~-------------------r~knrEl~im~~l~HpNIV~L~~ 84 (364)
T KOG0658|consen 25 SYEAVRLIGSGSFGVVYQAKLR-ETEEEVAIKKVLQDK-------------------RYKNRELQIMRKLDHPNIVRLLY 84 (364)
T ss_pred EEEeeEEEeecccceEEEEEEc-CCCceeEEEEecCCC-------------------CcCcHHHHHHHhcCCcCeeeEEE
Confidence 4777899999999999999875 458999999883311 12246899999999999999998
Q ss_pred EEecC--C---eeEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCC
Q 011360 273 HMVRP--D---CHLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVLLND 347 (487)
Q Consensus 273 ~~~~~--~---~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nill~~ 347 (487)
+|... . +..+||||++. +|..+++.+...+..++...++-+..||.+||+|| |+.||+||||||.|+|+|.
T Consensus 85 ~f~~~~~~d~~~lnlVleymP~-tL~~~~r~~~~~~~~mp~~~iKLYt~Qlfrgl~yL---h~~~IcHRDIKPqNlLvD~ 160 (364)
T KOG0658|consen 85 FFSSSTESDEVYLNLVLEYMPE-TLYRVIRHYTRANQRMPLLEIKLYTYQLFRGLAYL---HSHGICHRDIKPQNLLVDP 160 (364)
T ss_pred EEEecCCCchhHHHHHHHhchH-HHHHHHHHHhhcCCCCceeeeHHHHHHHHHHHHHH---HhcCcccCCCChheEEEcC
Confidence 88743 2 34589999966 99999987777788899999999999999999999 6789999999999999997
Q ss_pred C-CCEEEeccCCccccCCCCceeeEeeecccccccCCcccCCC-CCCchhHHHHHHHHHHHHHhCCCCccccCCCCcccc
Q 011360 348 D-MEACISDLGLAMAIPDGYTRVLISYVLGTMAYIAPEYFQQP-ELSEKCDIFSFGMLLISLVRGVPSFVFHQNGEEICS 425 (487)
Q Consensus 348 ~-~~~kl~DFg~s~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~-~~~~~~DvwslG~~l~elltg~~pf~~~~~~~~~~~ 425 (487)
+ |.+||||||.|+.+..+..+. .+..|..|.|||.+.+. .|+.+.||||.||++.||+-|++.|.+.+....
T Consensus 161 ~tg~LKicDFGSAK~L~~~epni---SYicSRyYRaPELifga~~Yt~~IDiWSaGCV~aELl~g~plFpG~s~~dQ--- 234 (364)
T KOG0658|consen 161 DTGVLKICDFGSAKVLVKGEPNI---SYICSRYYRAPELIFGATEYTTSIDIWSAGCVMAELLKGQPLFPGDSSVDQ--- 234 (364)
T ss_pred CCCeEEeccCCcceeeccCCCce---eEEEeccccCHHHHcCccccCceeEEhhhhHHHHHHhcCCcccCCCCHHHH---
Confidence 6 899999999999887765542 45579999999988765 899999999999999999999999976543211
Q ss_pred HHHHHHHH-----------hcCCCCCccCCCCCCC-----CcHHHHHHHHHHHhhccCCCCCCCCChHHHHH
Q 011360 426 PEWLRKVM-----------NSKNPSRAIDPRLPGN-----GYEKKMLHVLKIAYICTLHDPEERPNSQYVRC 481 (487)
Q Consensus 426 ~~~~~~~~-----------~~~~~~~~~~~~~~~~-----~~~~~~~~l~~li~~cl~~~P~~RPs~~~il~ 481 (487)
...+.+++ ..+.. ..--+.+... .......+..+++.++|..+|.+|.++.++++
T Consensus 235 L~eIik~lG~Pt~e~I~~mn~~y~-~~~~p~ik~~~~~~~~~~~~~~d~~dll~~~L~Y~P~~R~~~~~~l~ 305 (364)
T KOG0658|consen 235 LVEIIKVLGTPTREDIKSMNPNYT-EFKFPQIKAHPWHKVFFKRLPPDALDLLSKLLQYSPSKRLSALEALA 305 (364)
T ss_pred HHHHHHHhCCCCHHHHhhcCcccc-cccCcccccccceeecccCCCHHHHHHHHHHhccChhhcCCHHHHhc
Confidence 11111111 11111 0001111111 22334567899999999999999999999875
No 92
>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk. Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom
Probab=100.00 E-value=2e-39 Score=309.07 Aligned_cols=255 Identities=27% Similarity=0.372 Sum_probs=204.7
Q ss_pred cccccccccccccceeEEEEEecCCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCCCCccccc
Q 011360 192 DCFASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQIRHRNILPLL 271 (487)
Q Consensus 192 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~ 271 (487)
.+|.+.+.||.|+||.||+|... ++..+++|.+.. ........+..|+.+++.++||||++++
T Consensus 6 ~~y~~~~~ig~g~~~~vy~~~~~--~~~~~~~k~~~~---------------~~~~~~~~~~~e~~~l~~l~~~~i~~~~ 68 (261)
T cd05148 6 EEFTLERKLGSGYFGEVWEGLWK--NRVRVAIKILKS---------------DDLLKQQDFQKEVQALKRLRHKHLISLF 68 (261)
T ss_pred HHHHHhhhhccCCCccEEEeEec--CCCcEEEEeccc---------------cchhhHHHHHHHHHHHhcCCCcchhhee
Confidence 45899999999999999999865 378999998732 1122344678899999999999999999
Q ss_pred eEEecCCeeEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCCE
Q 011360 272 AHMVRPDCHLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVLLNDDMEA 351 (487)
Q Consensus 272 ~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nill~~~~~~ 351 (487)
+++...+..++||||+++++|.+++.. ..+..+++..+..++.|++.||.|| |++|++|+||+|+||+++.++.+
T Consensus 69 ~~~~~~~~~~lv~e~~~~~~L~~~~~~--~~~~~~~~~~~~~~~~~i~~al~~l---H~~~i~h~dl~~~nilv~~~~~~ 143 (261)
T cd05148 69 AVCSVGEPVYIITELMEKGSLLAFLRS--PEGQVLPVASLIDMACQVAEGMAYL---EEQNSIHRDLAARNILVGEDLVC 143 (261)
T ss_pred eeEecCCCeEEEEeecccCCHHHHHhc--CCCCCCCHHHHHHHHHHHHHHHHHH---HHCCeeccccCcceEEEcCCceE
Confidence 999999999999999999999999975 2345689999999999999999999 67889999999999999999999
Q ss_pred EEeccCCccccCCCCceeeEeeecccccccCCcccCCCCCCchhHHHHHHHHHHHHHh-CCCCccccCCCCccccHHHHH
Q 011360 352 CISDLGLAMAIPDGYTRVLISYVLGTMAYIAPEYFQQPELSEKCDIFSFGMLLISLVR-GVPSFVFHQNGEEICSPEWLR 430 (487)
Q Consensus 352 kl~DFg~s~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DvwslG~~l~ellt-g~~pf~~~~~~~~~~~~~~~~ 430 (487)
||+|||.+.......... ....++..|+|||.+.+..++.++||||||+++|+|++ |..||.... ..+...
T Consensus 144 kl~d~g~~~~~~~~~~~~--~~~~~~~~~~~PE~~~~~~~~~~~DiwslG~~l~~l~~~g~~p~~~~~------~~~~~~ 215 (261)
T cd05148 144 KVADFGLARLIKEDVYLS--SDKKIPYKWTAPEAASHGTFSTKSDVWSFGILLYEMFTYGQVPYPGMN------NHEVYD 215 (261)
T ss_pred EEccccchhhcCCccccc--cCCCCceEecCHHHHccCCCCchhhHHHHHHHHHHHHcCCCCCCCcCC------HHHHHH
Confidence 999999997764432211 12345778999999988889999999999999999998 899994332 122233
Q ss_pred HHHhcCCCCCccCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCChHHHHHHHhhh
Q 011360 431 KVMNSKNPSRAIDPRLPGNGYEKKMLHVLKIAYICTLHDPEERPNSQYVRCRLSQL 486 (487)
Q Consensus 431 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~~il~~L~~l 486 (487)
.......+ .... ..+..+.+++.+||..+|++|||+.+|++.|+.+
T Consensus 216 ~~~~~~~~--~~~~--------~~~~~~~~~i~~~l~~~p~~Rpt~~~l~~~L~~~ 261 (261)
T cd05148 216 QITAGYRM--PCPA--------KCPQEIYKIMLECWAAEPEDRPSFKALREELDNI 261 (261)
T ss_pred HHHhCCcC--CCCC--------CCCHHHHHHHHHHcCCCchhCcCHHHHHHHHhcC
Confidence 23222111 1111 1235688999999999999999999999999864
No 93
>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=100.00 E-value=3.2e-39 Score=311.70 Aligned_cols=261 Identities=23% Similarity=0.378 Sum_probs=203.0
Q ss_pred cccccccccccccceeEEEEEe---cCCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCCCCcc
Q 011360 192 DCFASLEKIGSGGCGEVYKAEL---PGSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQIRHRNIL 268 (487)
Q Consensus 192 ~~~~~~~~lg~G~~g~v~~~~~---~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv 268 (487)
+.|++.+.||+|+||.||+|.+ ...++..+++|.+.. .........+.+|+.+++.++||||+
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~--------------~~~~~~~~~~~~E~~~l~~l~h~niv 70 (283)
T cd05090 5 SAVRFMEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKD--------------INNPQQWGEFQQEASLMAELHHPNIV 70 (283)
T ss_pred hhceeeeeccccCCcceEEEEEecCCCCCcceEEEEeccC--------------CCCHHHHHHHHHHHHHHhhCCCCCee
Confidence 3588899999999999999975 233567899998732 11123345678899999999999999
Q ss_pred ccceEEecCCeeEEEEEecCCCCHHHHHhhhhc-------------CCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeee
Q 011360 269 PLLAHMVRPDCHLLVYEFMKNGSLQDILDDVSR-------------GRRELDWPSRHRIALGVASGLEYLHMYHSASIIH 335 (487)
Q Consensus 269 ~l~~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~-------------~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH 335 (487)
++++++...+..|++|||+++++|.+++..... ....+++..+..++.|++.||.|| |++|++|
T Consensus 71 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~l---H~~~i~H 147 (283)
T cd05090 71 CLLGVVTQEQPVCMLFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYL---SSHFFVH 147 (283)
T ss_pred eEEEEEecCCceEEEEEcCCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHH---HhcCeeh
Confidence 999999999999999999999999999853211 123578888999999999999999 6778999
Q ss_pred cCCCCCCEEeCCCCCEEEeccCCccccCCCCceeeEeeecccccccCCcccCCCCCCchhHHHHHHHHHHHHHh-CCCCc
Q 011360 336 GDIKPRNVLLNDDMEACISDLGLAMAIPDGYTRVLISYVLGTMAYIAPEYFQQPELSEKCDIFSFGMLLISLVR-GVPSF 414 (487)
Q Consensus 336 ~Dlkp~Nill~~~~~~kl~DFg~s~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DvwslG~~l~ellt-g~~pf 414 (487)
|||||+||+++.++.+||+|||++................++..|+|||++.+..++.++||||||+++|||++ |..||
T Consensus 148 ~dlkp~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~g~~p~ 227 (283)
T cd05090 148 KDLAARNILIGEQLHVKISDLGLSREIYSADYYRVQPKSLLPIRWMPPEAIMYGKFSSDSDIWSFGVVLWEIFSFGLQPY 227 (283)
T ss_pred hccccceEEEcCCCcEEeccccccccccCCcceecccCCCccceecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCC
Confidence 99999999999999999999999987644332222233446778999999988889999999999999999998 89998
Q ss_pred cccCCCCccccHHHHHHHHhcCCCCCccCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCChHHHHHHHhh
Q 011360 415 VFHQNGEEICSPEWLRKVMNSKNPSRAIDPRLPGNGYEKKMLHVLKIAYICTLHDPEERPNSQYVRCRLSQ 485 (487)
Q Consensus 415 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~~il~~L~~ 485 (487)
..... ............. ..+.. .+..+.+++.+||+.+|.+||++.+|++.|+.
T Consensus 228 ~~~~~-------~~~~~~~~~~~~~-~~~~~--------~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~~ 282 (283)
T cd05090 228 YGFSN-------QEVIEMVRKRQLL-PCSED--------CPPRMYSLMTECWQEGPSRRPRFKDIHTRLRS 282 (283)
T ss_pred CCCCH-------HHHHHHHHcCCcC-CCCCC--------CCHHHHHHHHHHcccCcccCcCHHHHHHHhhc
Confidence 43221 1222222222111 11111 22458899999999999999999999999874
No 94
>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the
Probab=100.00 E-value=5.6e-40 Score=326.84 Aligned_cols=255 Identities=24% Similarity=0.385 Sum_probs=202.6
Q ss_pred ccccccccccccceeEEEEEecCCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCCCCccccce
Q 011360 193 CFASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQIRHRNILPLLA 272 (487)
Q Consensus 193 ~~~~~~~lg~G~~g~v~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~ 272 (487)
+|.+.+.||.|+||.||+|.. ..+++.||+|++... ..........+..|+.++..++||||+++++
T Consensus 2 ~y~~~~~lg~G~~g~Vy~~~~-~~~~~~~aiK~~~~~------------~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~ 68 (350)
T cd05573 2 DFEVIKVIGRGAFGEVWLVRD-KDTGQVYAMKVLRKS------------DMIKRNQIAHVRAERDILADADSPWIVKLYY 68 (350)
T ss_pred CceEEEEEEeCCcEEEEEEEE-CCCCCEEEEEEEEHH------------HHhhccHHHHHHHHHHHHHhcCCCCccchhh
Confidence 588999999999999999975 457899999988421 1112234567888999999999999999999
Q ss_pred EEecCCeeEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCCEE
Q 011360 273 HMVRPDCHLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVLLNDDMEAC 352 (487)
Q Consensus 273 ~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nill~~~~~~k 352 (487)
++.+++..|+||||+++++|.+++.. ...+++..+..++.|++.||.|| |++||+||||||+||+++.++.+|
T Consensus 69 ~~~~~~~~~lv~e~~~~~~L~~~l~~----~~~l~~~~~~~i~~qi~~aL~~L---H~~giiH~Dlkp~NIll~~~~~~k 141 (350)
T cd05573 69 SFQDEEHLYLVMEYMPGGDLMNLLIR----KDVFPEETARFYIAELVLALDSV---HKLGFIHRDIKPDNILIDADGHIK 141 (350)
T ss_pred heecCCeEEEEEcCCCCCCHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHH---HHCCeeccCCCHHHeEECCCCCEE
Confidence 99999999999999999999999975 35789999999999999999999 678999999999999999999999
Q ss_pred EeccCCccccCCCC---------------------------ceeeEeeecccccccCCcccCCCCCCchhHHHHHHHHHH
Q 011360 353 ISDLGLAMAIPDGY---------------------------TRVLISYVLGTMAYIAPEYFQQPELSEKCDIFSFGMLLI 405 (487)
Q Consensus 353 l~DFg~s~~~~~~~---------------------------~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DvwslG~~l~ 405 (487)
|+|||++....... .........||+.|+|||++.+..++.++|||||||++|
T Consensus 142 L~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ 221 (350)
T cd05573 142 LADFGLCKKMNKAKDREYYLNDSHNLLFRDNVLVRRRDHKQRRVRANSTVGTPDYIAPEVLRGTPYGLECDWWSLGVILY 221 (350)
T ss_pred eecCCCCccCcccCcccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCceeeEecchhhh
Confidence 99999997664432 001123456899999999999999999999999999999
Q ss_pred HHHhCCCCccccCCCCccccHHHHHHHHhcCCCCCccCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCC-hHHHHH
Q 011360 406 SLVRGVPSFVFHQNGEEICSPEWLRKVMNSKNPSRAIDPRLPGNGYEKKMLHVLKIAYICTLHDPEERPN-SQYVRC 481 (487)
Q Consensus 406 elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs-~~~il~ 481 (487)
+|++|..||..... .+....+..... ... ++... ..+.++.+++.+||. +|.+||+ +.++++
T Consensus 222 ell~g~~Pf~~~~~------~~~~~~i~~~~~-~~~----~p~~~--~~~~~~~~li~~ll~-dp~~R~~s~~~ll~ 284 (350)
T cd05573 222 EMLYGFPPFYSDTL------QETYNKIINWKE-SLR----FPPDP--PVSPEAIDLICRLLC-DPEDRLGSFEEIKS 284 (350)
T ss_pred hhccCCCCCCCCCH------HHHHHHHhccCC-ccc----CCCCC--CCCHHHHHHHHHHcc-ChhhcCCCHHHHhc
Confidence 99999999954331 222222222100 000 11110 133568899999998 9999999 999875
No 95
>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,
Probab=100.00 E-value=1.5e-39 Score=315.54 Aligned_cols=265 Identities=25% Similarity=0.338 Sum_probs=206.3
Q ss_pred hccccccccccccccceeEEEEEecC----CCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccC-CC
Q 011360 190 KEDCFASLEKIGSGGCGEVYKAELPG----SNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQI-RH 264 (487)
Q Consensus 190 ~~~~~~~~~~lg~G~~g~v~~~~~~~----~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h 264 (487)
..++|.+.+.||+|+||.||++.+.. .....+|+|.+.. .........+.+|+.++..+ +|
T Consensus 10 ~~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~--------------~~~~~~~~~~~~E~~~l~~l~~h 75 (293)
T cd05053 10 PRDRLTLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKD--------------DATEKDLSDLVSEMEMMKMIGKH 75 (293)
T ss_pred CHhHeEEeeEecccccccEEEEEEecCCCCCCceeEEEEEccC--------------CCCHHHHHHHHHHHHHHHhhcCC
Confidence 34568999999999999999997642 2346799998732 11122345678899999999 89
Q ss_pred CCccccceEEecCCeeEEEEEecCCCCHHHHHhhhh------------cCCCCCChHHHHHHHHHHHHHHHHHHhcCCCC
Q 011360 265 RNILPLLAHMVRPDCHLLVYEFMKNGSLQDILDDVS------------RGRRELDWPSRHRIALGVASGLEYLHMYHSAS 332 (487)
Q Consensus 265 pnIv~l~~~~~~~~~~~lv~E~~~~gsL~~~l~~~~------------~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~g 332 (487)
|||+++++++...+..+++|||+++|+|.+++.... .....+++..+..++.|++.||.|| |+.|
T Consensus 76 ~~i~~~~~~~~~~~~~~li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~L---H~~~ 152 (293)
T cd05053 76 KNIINLLGVCTQEGPLYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFL---ASKK 152 (293)
T ss_pred CCeeeEEEEEcCCCCeEEEEEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHH---HHCC
Confidence 999999999999999999999999999999986421 2345688999999999999999999 6788
Q ss_pred eeecCCCCCCEEeCCCCCEEEeccCCccccCCCCceeeEeeecccccccCCcccCCCCCCchhHHHHHHHHHHHHHh-CC
Q 011360 333 IIHGDIKPRNVLLNDDMEACISDLGLAMAIPDGYTRVLISYVLGTMAYIAPEYFQQPELSEKCDIFSFGMLLISLVR-GV 411 (487)
Q Consensus 333 ivH~Dlkp~Nill~~~~~~kl~DFg~s~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DvwslG~~l~ellt-g~ 411 (487)
|+||||||+||+++.++.+||+|||+++...............++..|+|||.+.+..++.++|||||||++|++++ |.
T Consensus 153 ivH~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~ 232 (293)
T cd05053 153 CIHRDLAARNVLVTEDHVMKIADFGLARDIHHIDYYRKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGG 232 (293)
T ss_pred ccccccceeeEEEcCCCeEEeCccccccccccccceeccCCCCCCccccCHHHhccCCcCcccceeehhhHHHHHhcCCC
Confidence 99999999999999999999999999987654332222222335678999999988899999999999999999998 88
Q ss_pred CCccccCCCCccccHHHHHHHHhcCCCCCccCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCChHHHHHHHhhhC
Q 011360 412 PSFVFHQNGEEICSPEWLRKVMNSKNPSRAIDPRLPGNGYEKKMLHVLKIAYICTLHDPEERPNSQYVRCRLSQLL 487 (487)
Q Consensus 412 ~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~~il~~L~~ll 487 (487)
.||.... ..+.. ......... ..+. .....+.+++.+||..+|++|||+.++++.|+.++
T Consensus 233 ~p~~~~~------~~~~~-~~~~~~~~~-~~~~--------~~~~~~~~li~~~l~~~p~~Rps~~eil~~l~~~~ 292 (293)
T cd05053 233 SPYPGIP------VEELF-KLLKEGYRM-EKPQ--------NCTQELYHLMRDCWHEVPSQRPTFKQLVEDLDRML 292 (293)
T ss_pred CCCCCCC------HHHHH-HHHHcCCcC-CCCC--------CCCHHHHHHHHHHcccCcccCcCHHHHHHHHHHhh
Confidence 8984321 11222 222222111 1111 12346889999999999999999999999999874
No 96
>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=100.00 E-value=1.6e-39 Score=313.83 Aligned_cols=260 Identities=24% Similarity=0.375 Sum_probs=203.7
Q ss_pred ccccccccccccceeEEEEEecC----CCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCCCCcc
Q 011360 193 CFASLEKIGSGGCGEVYKAELPG----SNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQIRHRNIL 268 (487)
Q Consensus 193 ~~~~~~~lg~G~~g~v~~~~~~~----~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv 268 (487)
.|.+.+.||.|+||.||+|.+.. .++..||+|++.. .........+..|+.++..++||||+
T Consensus 6 ~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~--------------~~~~~~~~~~~~e~~~~~~l~h~~iv 71 (283)
T cd05091 6 TVRFMEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKD--------------KAEGPLREEFKHEAMMRSRLQHPNIV 71 (283)
T ss_pred HHHHHHHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccC--------------CCCHHHHHHHHHHHHHHhcCCCCCcC
Confidence 48889999999999999997632 2457899998742 11122345678899999999999999
Q ss_pred ccceEEecCCeeEEEEEecCCCCHHHHHhhhh------------cCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeec
Q 011360 269 PLLAHMVRPDCHLLVYEFMKNGSLQDILDDVS------------RGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHG 336 (487)
Q Consensus 269 ~l~~~~~~~~~~~lv~E~~~~gsL~~~l~~~~------------~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~ 336 (487)
++++++...+..++++||+.+++|.+++.... .....+++..+..++.|++.||.|| |++|++||
T Consensus 72 ~~~~~~~~~~~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~l---H~~gi~H~ 148 (283)
T cd05091 72 CLLGVVTKEQPLSMIFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFL---SSHHVVHK 148 (283)
T ss_pred eEEEEEcCCCceEEEEEcCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHH---HHcCcccc
Confidence 99999999999999999999999999985311 1123578888999999999999999 77889999
Q ss_pred CCCCCCEEeCCCCCEEEeccCCccccCCCCceeeEeeecccccccCCcccCCCCCCchhHHHHHHHHHHHHHh-CCCCcc
Q 011360 337 DIKPRNVLLNDDMEACISDLGLAMAIPDGYTRVLISYVLGTMAYIAPEYFQQPELSEKCDIFSFGMLLISLVR-GVPSFV 415 (487)
Q Consensus 337 Dlkp~Nill~~~~~~kl~DFg~s~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DvwslG~~l~ellt-g~~pf~ 415 (487)
||||+||++++++.+||+|||+++...............+++.|+|||.+.+..++.++||||||+++|||++ |..||.
T Consensus 149 dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~ 228 (283)
T cd05091 149 DLATRNVLVFDKLNVKISDLGLFREVYAADYYKLMGNSLLPIRWMSPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYC 228 (283)
T ss_pred ccchhheEecCCCceEecccccccccccchheeeccCccCCccccCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCC
Confidence 9999999999999999999999887644333222233446789999999988889999999999999999998 788884
Q ss_pred ccCCCCccccHHHHHHHHhcCCCCCccCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCChHHHHHHHhh
Q 011360 416 FHQNGEEICSPEWLRKVMNSKNPSRAIDPRLPGNGYEKKMLHVLKIAYICTLHDPEERPNSQYVRCRLSQ 485 (487)
Q Consensus 416 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~~il~~L~~ 485 (487)
... ..+........... . ++.. .+..+.+++.+||+.+|++||++.+|++.|+.
T Consensus 229 ~~~------~~~~~~~i~~~~~~--~----~~~~----~~~~~~~li~~cl~~~p~~RP~~~~i~~~l~~ 282 (283)
T cd05091 229 GYS------NQDVIEMIRNRQVL--P----CPDD----CPAWVYTLMLECWNEFPSRRPRFKDIHSRLRT 282 (283)
T ss_pred CCC------HHHHHHHHHcCCcC--C----CCCC----CCHHHHHHHHHHhCCCcccCCCHHHHHHHhhC
Confidence 322 22333333322211 1 1111 23458899999999999999999999999975
No 97
>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a
Probab=100.00 E-value=3.1e-39 Score=307.93 Aligned_cols=256 Identities=27% Similarity=0.394 Sum_probs=202.0
Q ss_pred ccccccccccccccceeEEEEEecCCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCCCCcccc
Q 011360 191 EDCFASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQIRHRNILPL 270 (487)
Q Consensus 191 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l 270 (487)
.++|.+.+.||.|++|.||+|... ++..||+|.+... ......+.+|+.++++++||||+++
T Consensus 5 ~~~~~~~~~lg~g~~~~v~~~~~~--~~~~v~iK~~~~~----------------~~~~~~~~~e~~~l~~l~h~~i~~~ 66 (261)
T cd05068 5 RTSIQLLRKLGAGQFGEVWEGLWN--NTTPVAVKTLKPG----------------TMDPKDFLAEAQIMKKLRHPKLIQL 66 (261)
T ss_pred hhheeeEEEecccCCccEEEEEec--CCeEEEEEeeCCC----------------cccHHHHHHHHHHHHHCCCCCccce
Confidence 346899999999999999999753 4578999987321 1123457789999999999999999
Q ss_pred ceEEecCCeeEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCC
Q 011360 271 LAHMVRPDCHLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVLLNDDME 350 (487)
Q Consensus 271 ~~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nill~~~~~ 350 (487)
++++...+..+++|||+++++|.+++.. ..+..+++..+..++.|++.||.|| |+.|++||||||+||+++.++.
T Consensus 67 ~~~~~~~~~~~lv~e~~~~~~L~~~~~~--~~~~~~~~~~~~~~~~~i~~~l~~l---H~~~i~H~dl~p~Nil~~~~~~ 141 (261)
T cd05068 67 YAVCTLEEPIYIVTELMKYGSLLEYLQG--GAGRALKLPQLIDMAAQVASGMAYL---EAQNYIHRDLAARNVLVGENNI 141 (261)
T ss_pred eEEEecCCCeeeeeecccCCcHHHHHhc--cCCCCCCHHHHHHHHHHHHHHHHHH---HhCCeeeccCCcceEEEcCCCC
Confidence 9999999999999999999999999865 2245689999999999999999999 6778999999999999999999
Q ss_pred EEEeccCCccccCCCCceeeEeeecccccccCCcccCCCCCCchhHHHHHHHHHHHHHh-CCCCccccCCCCccccHHHH
Q 011360 351 ACISDLGLAMAIPDGYTRVLISYVLGTMAYIAPEYFQQPELSEKCDIFSFGMLLISLVR-GVPSFVFHQNGEEICSPEWL 429 (487)
Q Consensus 351 ~kl~DFg~s~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DvwslG~~l~ellt-g~~pf~~~~~~~~~~~~~~~ 429 (487)
++|+|||++.......... ......+..|+|||.+.+..++.++||||||+++|+|+| |..||..... ....
T Consensus 142 ~~l~dfg~~~~~~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~------~~~~ 214 (261)
T cd05068 142 CKVADFGLARVIKEDIYEA-REGAKFPIKWTAPEAALYNRFSIKSDVWSFGILLTEIVTYGRMPYPGMTN------AEVL 214 (261)
T ss_pred EEECCcceEEEccCCcccc-cCCCcCceeccCccccccCCCCchhhHHHHHHHHHHHHhcCCCCCCCCCH------HHHH
Confidence 9999999998765322111 111223457999999998899999999999999999999 8999943321 1122
Q ss_pred HHHHhcCCCCCccCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCChHHHHHHHhhh
Q 011360 430 RKVMNSKNPSRAIDPRLPGNGYEKKMLHVLKIAYICTLHDPEERPNSQYVRCRLSQL 486 (487)
Q Consensus 430 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~~il~~L~~l 486 (487)
... ..... ..... ..+..+.+++.+||+.+|++||++.+|++.|+.+
T Consensus 215 ~~~-~~~~~-~~~~~--------~~~~~~~~li~~~l~~~P~~Rp~~~~l~~~l~~~ 261 (261)
T cd05068 215 QQV-DQGYR-MPCPP--------GCPKELYDIMLDCWKEDPDDRPTFETLQWKLEDF 261 (261)
T ss_pred HHH-HcCCC-CCCCC--------cCCHHHHHHHHHHhhcCcccCCCHHHHHHHHhcC
Confidence 222 22111 11111 1235688999999999999999999999999864
No 98
>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of
Probab=100.00 E-value=8.4e-40 Score=328.79 Aligned_cols=255 Identities=22% Similarity=0.373 Sum_probs=196.7
Q ss_pred ccccccccccccceeEEEEEecCCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCCCCccccce
Q 011360 193 CFASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQIRHRNILPLLA 272 (487)
Q Consensus 193 ~~~~~~~lg~G~~g~v~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~ 272 (487)
+|.+.+.||.|+||.||++.. ..+++.||||++.. ...........+.+|+.++.+++||||+++++
T Consensus 2 ~y~~~~~lG~G~~g~Vy~~~~-~~~~~~~aiK~~~~------------~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~ 68 (377)
T cd05629 2 DFHTVKVIGKGAFGEVRLVQK-KDTGKIYAMKTLLK------------SEMFKKDQLAHVKAERDVLAESDSPWVVSLYY 68 (377)
T ss_pred CceEeEEEeecCCEEEEEEEE-CCCCCEEEEEEEEH------------HHHHHhHHHHHHHHHHHHHHhCCCCCcceEEE
Confidence 588999999999999999974 46889999998732 11122334567888999999999999999999
Q ss_pred EEecCCeeEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCCEE
Q 011360 273 HMVRPDCHLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVLLNDDMEAC 352 (487)
Q Consensus 273 ~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nill~~~~~~k 352 (487)
++.+.+..|+||||+++|+|.+++.. ...+++..+..++.|++.||.|| |+.||+||||||+|||++.++.+|
T Consensus 69 ~~~~~~~~~lv~E~~~gg~L~~~l~~----~~~~~~~~~~~~~~ql~~aL~~L---H~~givHrDlkp~NIll~~~~~~k 141 (377)
T cd05629 69 SFQDAQYLYLIMEFLPGGDLMTMLIK----YDTFSEDVTRFYMAECVLAIEAV---HKLGFIHRDIKPDNILIDRGGHIK 141 (377)
T ss_pred EEEcCCeeEEEEeCCCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHH---HhCCeeccCCCHHHEEECCCCCEE
Confidence 99999999999999999999999864 45688999999999999999999 788999999999999999999999
Q ss_pred EeccCCccccCCCCce---------------------------------------------eeEeeecccccccCCcccC
Q 011360 353 ISDLGLAMAIPDGYTR---------------------------------------------VLISYVLGTMAYIAPEYFQ 387 (487)
Q Consensus 353 l~DFg~s~~~~~~~~~---------------------------------------------~~~~~~~gt~~y~aPE~l~ 387 (487)
|+|||+++........ .......||+.|+|||++.
T Consensus 142 l~DfGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~ 221 (377)
T cd05629 142 LSDFGLSTGFHKQHDSAYYQKLLQGKSNKNRIDNRNSVAVDSINLTMSSKDQIATWKKNRRLMAYSTVGTPDYIAPEIFL 221 (377)
T ss_pred EeecccccccccccccccccccccccccccccccccccccccccccccchhhhhhhhhcccccccccCCCccccCHHHHc
Confidence 9999998643211000 0001246899999999999
Q ss_pred CCCCCchhHHHHHHHHHHHHHhCCCCccccCCCCccccHHHHHHHHhcCCCCCccCCCCCCCCcHHHHHHHHHHHhhccC
Q 011360 388 QPELSEKCDIFSFGMLLISLVRGVPSFVFHQNGEEICSPEWLRKVMNSKNPSRAIDPRLPGNGYEKKMLHVLKIAYICTL 467 (487)
Q Consensus 388 ~~~~~~~~DvwslG~~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~ 467 (487)
+..++.++|||||||++|||++|.+||..... .+............ .++.. ...+.++.+++.+||.
T Consensus 222 ~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~------~~~~~~i~~~~~~~-----~~p~~--~~~s~~~~dli~~lL~ 288 (377)
T cd05629 222 QQGYGQECDWWSLGAIMFECLIGWPPFCSENS------HETYRKIINWRETL-----YFPDD--IHLSVEAEDLIRRLIT 288 (377)
T ss_pred cCCCCCceeeEecchhhhhhhcCCCCCCCCCH------HHHHHHHHccCCcc-----CCCCC--CCCCHHHHHHHHHHhc
Confidence 98999999999999999999999999943321 12222222211110 01111 1123568889999997
Q ss_pred CCCCCC---CChHHHHH
Q 011360 468 HDPEER---PNSQYVRC 481 (487)
Q Consensus 468 ~~P~~R---Ps~~~il~ 481 (487)
+|.+| ||+.+++.
T Consensus 289 -~~~~r~~r~~~~~~l~ 304 (377)
T cd05629 289 -NAENRLGRGGAHEIKS 304 (377)
T ss_pred -CHhhcCCCCCHHHHhc
Confidence 66665 58888775
No 99
>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl. Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor
Probab=100.00 E-value=4.7e-39 Score=308.52 Aligned_cols=261 Identities=24% Similarity=0.401 Sum_probs=198.5
Q ss_pred ccccccccccceeEEEEEecCCCC-ceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCCCCccccceE
Q 011360 195 ASLEKIGSGGCGEVYKAELPGSNG-KMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQIRHRNILPLLAH 273 (487)
Q Consensus 195 ~~~~~lg~G~~g~v~~~~~~~~~~-~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~ 273 (487)
.+.+.||.|+||.||+|.+..... ..+|+|.+.. ..........+..|+.+++.++||||++++++
T Consensus 2 ~i~~~ig~G~~g~V~~~~~~~~~~~~~~a~k~~~~-------------~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~ 68 (272)
T cd05075 2 ALGKTLGEGEFGSVMEGQLNQDDSILKVAVKTMKI-------------AICTRSEMEDFLSEAVCMKEFDHPNVMRLIGV 68 (272)
T ss_pred ccccccCcccCceEEEeEEccCCCeeeEEEEeccc-------------CcCCHHHHHHHHHHHHHHHhCCCCCcceEEEE
Confidence 456889999999999998643222 3689997732 11223445678889999999999999999997
Q ss_pred EecC------CeeEEEEEecCCCCHHHHHhhhh--cCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEe
Q 011360 274 MVRP------DCHLLVYEFMKNGSLQDILDDVS--RGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVLL 345 (487)
Q Consensus 274 ~~~~------~~~~lv~E~~~~gsL~~~l~~~~--~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nill 345 (487)
+... ...+++|||+++|+|.+++.... .....+++..+..++.|++.||.|| |++||+||||||+||++
T Consensus 69 ~~~~~~~~~~~~~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~l---H~~~i~H~dlkp~Nil~ 145 (272)
T cd05075 69 CLQTVESEGYPSPVVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYL---SSKSFIHRDLAARNCML 145 (272)
T ss_pred EccCCcccCCCCcEEEEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHHH---HHCCeeccccchhheEE
Confidence 6532 24689999999999999875322 2234588999999999999999999 67789999999999999
Q ss_pred CCCCCEEEeccCCccccCCCCceeeEeeecccccccCCcccCCCCCCchhHHHHHHHHHHHHHh-CCCCccccCCCCccc
Q 011360 346 NDDMEACISDLGLAMAIPDGYTRVLISYVLGTMAYIAPEYFQQPELSEKCDIFSFGMLLISLVR-GVPSFVFHQNGEEIC 424 (487)
Q Consensus 346 ~~~~~~kl~DFg~s~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DvwslG~~l~ellt-g~~pf~~~~~~~~~~ 424 (487)
+.++.+||+|||++................+++.|+|||.+.+..++.++||||||+++|+|++ |..||....
T Consensus 146 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~------ 219 (272)
T cd05075 146 NENMNVCVADFGLSKKIYNGDYYRQGRIAKMPVKWIAIESLADRVYTTKSDVWSFGVTMWEIATRGQTPYPGVE------ 219 (272)
T ss_pred cCCCCEEECCCCcccccCcccceecCCcccCCcccCCHHHccCCCcChHHHHHHHHHHHHHHHcCCCCCCCCCC------
Confidence 9999999999999987654332111122346778999999999899999999999999999999 789994321
Q ss_pred cHHHHHHHHhcCCCCCccCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCChHHHHHHHhhhC
Q 011360 425 SPEWLRKVMNSKNPSRAIDPRLPGNGYEKKMLHVLKIAYICTLHDPEERPNSQYVRCRLSQLL 487 (487)
Q Consensus 425 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~~il~~L~~ll 487 (487)
..+..........+. ..+. .+..+.+++.+||+.+|++|||+.+|++.|++++
T Consensus 220 ~~~~~~~~~~~~~~~--~~~~--------~~~~~~~li~~~l~~~p~~Rps~~~l~~~l~~~~ 272 (272)
T cd05075 220 NSEIYDYLRQGNRLK--QPPD--------CLDGLYSLMSSCWLLNPKDRPSFETLRCELEKAL 272 (272)
T ss_pred HHHHHHHHHcCCCCC--CCCC--------CCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhhC
Confidence 122222222222111 1111 2245889999999999999999999999999875
No 100
>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.
Probab=100.00 E-value=7e-39 Score=306.46 Aligned_cols=263 Identities=25% Similarity=0.382 Sum_probs=209.5
Q ss_pred ccccccccccccceeEEEEEecCCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCCCCccccce
Q 011360 193 CFASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQIRHRNILPLLA 272 (487)
Q Consensus 193 ~~~~~~~lg~G~~g~v~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~ 272 (487)
+|.+.+.||.|+||.||++.. ..++..+|||.+... ..........+.+|+.+++.+.||||+++++
T Consensus 3 ~y~~~~~ig~g~~g~v~~~~~-~~~~~~~~vK~~~~~------------~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~ 69 (267)
T cd08229 3 NFRIEKKIGRGQFSEVYRATC-LLDGVPVALKKVQIF------------DLMDAKARADCIKEIDLLKQLNHPNVIKYYA 69 (267)
T ss_pred hhhhhhhhcccCCeEEEEEee-cCCCceEEEEeeeeh------------hhhhHHHHHHHHHHHHHHHHccCCchhhhhh
Confidence 588899999999999999975 357889999987431 1112234457788999999999999999999
Q ss_pred EEecCCeeEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCCEE
Q 011360 273 HMVRPDCHLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVLLNDDMEAC 352 (487)
Q Consensus 273 ~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nill~~~~~~k 352 (487)
++..++..+++|||+++++|.+++.........+++..+..++.|++.||.|| |++|++|+||+|+||+++.++.++
T Consensus 70 ~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~L---H~~~i~H~dl~p~nili~~~~~~~ 146 (267)
T cd08229 70 SFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEHM---HSRRVMHRDIKPANVFITATGVVK 146 (267)
T ss_pred eeEeCCeEEEEEEecCCCCHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHH---HHCCeecCCCCHHHEEEcCCCCEE
Confidence 99999999999999999999999876545556789999999999999999999 788999999999999999999999
Q ss_pred EeccCCccccCCCCceeeEeeecccccccCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCccccCCCCccccHHHHHHH
Q 011360 353 ISDLGLAMAIPDGYTRVLISYVLGTMAYIAPEYFQQPELSEKCDIFSFGMLLISLVRGVPSFVFHQNGEEICSPEWLRKV 432 (487)
Q Consensus 353 l~DFg~s~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DvwslG~~l~elltg~~pf~~~~~~~~~~~~~~~~~~ 432 (487)
|+|||++......... .....++..|+|||.+.+..++.++|+||||+++|+|++|..||...... ........
T Consensus 147 l~dfg~~~~~~~~~~~--~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~----~~~~~~~~ 220 (267)
T cd08229 147 LGDLGLGRFFSSKTTA--AHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMN----LYSLCKKI 220 (267)
T ss_pred ECcchhhhccccCCcc--cccccCCcCccCHHHhcCCCccchhhHHHHHHHHHHHHhCCCCcccccch----HHHHhhhh
Confidence 9999998765433221 12345889999999998888999999999999999999999999533211 11122222
Q ss_pred HhcCCCCCccCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCChHHHHHHHhhh
Q 011360 433 MNSKNPSRAIDPRLPGNGYEKKMLHVLKIAYICTLHDPEERPNSQYVRCRLSQL 486 (487)
Q Consensus 433 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~~il~~L~~l 486 (487)
.... . +..+ ....+..+.+++.+||..+|++|||+.+|++.++++
T Consensus 221 ~~~~-~-----~~~~---~~~~~~~~~~li~~~l~~~p~~Rpt~~~i~~~~~~~ 265 (267)
T cd08229 221 EQCD-Y-----PPLP---SDHYSEELRQLVNMCINPDPEKRPDITYVYDVAKRM 265 (267)
T ss_pred hcCC-C-----CCCC---cccccHHHHHHHHHhcCCCcccCCCHHHHHHHHhhh
Confidence 1111 1 1111 123445788999999999999999999999999875
No 101
>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos
Probab=100.00 E-value=1e-39 Score=323.29 Aligned_cols=261 Identities=25% Similarity=0.377 Sum_probs=193.7
Q ss_pred ccccccccccccceeEEEEEecCCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCCCCccccce
Q 011360 193 CFASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQIRHRNILPLLA 272 (487)
Q Consensus 193 ~~~~~~~lg~G~~g~v~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~ 272 (487)
+|.+.+.||.|+||.||+|.. ..++..||||++.. ..........+.+|+.+++.++||||+++++
T Consensus 1 ry~i~~~lg~G~~g~V~~~~~-~~~~~~vaiK~~~~-------------~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~ 66 (338)
T cd07859 1 RYKIQEVIGKGSYGVVCSAID-THTGEKVAIKKIND-------------VFEHVSDATRILREIKLLRLLRHPDIVEIKH 66 (338)
T ss_pred CeEEEEEEeecCCeEEEEEEE-CCCCCEEEEEEech-------------hhccchhHHHHHHHHHHHHhCCCCCEeeecc
Confidence 378899999999999999974 46789999998732 1111223456788999999999999999999
Q ss_pred EEecC-----CeeEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCC
Q 011360 273 HMVRP-----DCHLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVLLND 347 (487)
Q Consensus 273 ~~~~~-----~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nill~~ 347 (487)
++... ..+|+||||| +++|.+++.. ...+++..+..++.|++.||.|| |++||+||||||+|||++.
T Consensus 67 ~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~----~~~~~~~~~~~i~~qi~~aL~~L---H~~~ivH~dlkp~NIll~~ 138 (338)
T cd07859 67 IMLPPSRREFKDIYVVFELM-ESDLHQVIKA----NDDLTPEHHQFFLYQLLRALKYI---HTANVFHRDLKPKNILANA 138 (338)
T ss_pred eEeccCCCCCceEEEEEecC-CCCHHHHHHh----cccCCHHHHHHHHHHHHHHHHHH---HHCCeecCCCCHHHeEECC
Confidence 87643 2479999999 5689888864 45689999999999999999999 7788999999999999999
Q ss_pred CCCEEEeccCCccccCCCCc-eeeEeeecccccccCCcccCC--CCCCchhHHHHHHHHHHHHHhCCCCccccCCCCc--
Q 011360 348 DMEACISDLGLAMAIPDGYT-RVLISYVLGTMAYIAPEYFQQ--PELSEKCDIFSFGMLLISLVRGVPSFVFHQNGEE-- 422 (487)
Q Consensus 348 ~~~~kl~DFg~s~~~~~~~~-~~~~~~~~gt~~y~aPE~l~~--~~~~~~~DvwslG~~l~elltg~~pf~~~~~~~~-- 422 (487)
++.+||+|||+++....... ........||+.|+|||++.+ ..++.++|||||||++|+|+||++||........
T Consensus 139 ~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DvwSlGvvl~el~tg~~pf~~~~~~~~~~ 218 (338)
T cd07859 139 DCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLD 218 (338)
T ss_pred CCcEEEccCccccccccccCccccccCCCCCCCcCCHHHHhccccccCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHH
Confidence 99999999999976432211 111234568999999999875 5789999999999999999999999954321100
Q ss_pred -------cccHHHHHHH--------Hh---cCCCCCccCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCChHHHHH
Q 011360 423 -------ICSPEWLRKV--------MN---SKNPSRAIDPRLPGNGYEKKMLHVLKIAYICTLHDPEERPNSQYVRC 481 (487)
Q Consensus 423 -------~~~~~~~~~~--------~~---~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~~il~ 481 (487)
.......... .. ...+ ..+...+ ......+.+++.+||+.||++|||++++++
T Consensus 219 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~-~~~~~~~-----~~~~~~~~~li~~~l~~~P~~Rpt~~e~l~ 289 (338)
T cd07859 219 LITDLLGTPSPETISRVRNEKARRYLSSMRKKQP-VPFSQKF-----PNADPLALRLLERLLAFDPKDRPTAEEALA 289 (338)
T ss_pred HHHHHhCCCCHHHHHHhhhhhHHHHHHhhcccCC-CchHHhc-----CCCChHHHHHHHHHcCcCcccCCCHHHHhc
Confidence 0000000000 00 0000 0000001 112345789999999999999999999875
No 102
>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]
Probab=100.00 E-value=2.9e-40 Score=321.40 Aligned_cols=266 Identities=21% Similarity=0.310 Sum_probs=212.8
Q ss_pred ccccccccccccccceeEEEEEecCCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCCCCcccc
Q 011360 191 EDCFASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQIRHRNILPL 270 (487)
Q Consensus 191 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l 270 (487)
.+...+.+.||+|-||.|.++... .+..||+|+++... .......|.+|+++|.+++||||+++
T Consensus 537 Rs~L~~~ekiGeGqFGEVhLCeve--g~lkVAVK~Lr~~a--------------~~~~r~~F~kEIkiLsqLkhPNIveL 600 (807)
T KOG1094|consen 537 RSRLRFKEKIGEGQFGEVHLCEVE--GPLKVAVKILRPDA--------------TKNARNDFLKEIKILSRLKHPNIVEL 600 (807)
T ss_pred hhheehhhhhcCcccceeEEEEec--CceEEEEeecCccc--------------chhHHHHHHHHHHHHhccCCCCeeEE
Confidence 345788899999999999999875 46899999985422 22345789999999999999999999
Q ss_pred ceEEecCCeeEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCC
Q 011360 271 LAHMVRPDCHLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVLLNDDME 350 (487)
Q Consensus 271 ~~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nill~~~~~ 350 (487)
+|+|..++++++|+||++.|+|..|+..... .......-.+|+.||+.|++|| .+.++|||||.++|||++.+++
T Consensus 601 vGVC~~DePicmI~EYmEnGDLnqFl~ahea--pt~~t~~~vsi~tqiasgmaYL---es~nfVHrd~a~rNcLv~~e~~ 675 (807)
T KOG1094|consen 601 LGVCVQDDPLCMITEYMENGDLNQFLSAHEL--PTAETAPGVSICTQIASGMAYL---ESLNFVHRDLATRNCLVDGEFT 675 (807)
T ss_pred EeeeecCCchHHHHHHHhcCcHHHHHHhccC--cccccchhHHHHHHHHHHHHHH---HhhchhhccccccceeecCccc
Confidence 9999999999999999999999999986322 2234456678999999999999 7778999999999999999999
Q ss_pred EEEeccCCccccCCCCceeeEeeecccccccCCcccCCCCCCchhHHHHHHHHHHHHHh--CCCCccccCCCCccccHHH
Q 011360 351 ACISDLGLAMAIPDGYTRVLISYVLGTMAYIAPEYFQQPELSEKCDIFSFGMLLISLVR--GVPSFVFHQNGEEICSPEW 428 (487)
Q Consensus 351 ~kl~DFg~s~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DvwslG~~l~ellt--g~~pf~~~~~~~~~~~~~~ 428 (487)
+||+|||+++.+..+.........+-+++|||||.+..+.++.+||+|+||+++||+++ ...||....++... +.
T Consensus 676 iKiadfgmsR~lysg~yy~vqgr~vlpiRwmawEsillgkFttaSDvWafgvTlwE~~~~C~e~Py~~lt~e~vv---en 752 (807)
T KOG1094|consen 676 IKIADFGMSRNLYSGDYYRVQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEVFMLCREQPYSQLTDEQVV---EN 752 (807)
T ss_pred EEecCcccccccccCCceeeecceeeeeeehhHHHHHhccccchhhhhhhHHHHHHHHHHHhhCchhhhhHHHHH---Hh
Confidence 99999999998877776666666778999999999999999999999999999999987 47899544432211 22
Q ss_pred HHHHHhcCCCCCccCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCChHHHHHHHhhh
Q 011360 429 LRKVMNSKNPSRAIDPRLPGNGYEKKMLHVLKIAYICTLHDPEERPNSQYVRCRLSQL 486 (487)
Q Consensus 429 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~~il~~L~~l 486 (487)
...+.........+. .| ..++..+.++|.+||..+..+|||++++...|.+.
T Consensus 753 ~~~~~~~~~~~~~l~--~P----~~cp~~lyelml~Cw~~es~~RPsFe~lh~~lq~~ 804 (807)
T KOG1094|consen 753 AGEFFRDQGRQVVLS--RP----PACPQGLYELMLRCWRRESEQRPSFEQLHLFLQED 804 (807)
T ss_pred hhhhcCCCCcceecc--CC----CcCcHHHHHHHHHHhchhhhcCCCHHHHHHHHHHh
Confidence 222332222211111 11 12335688999999999999999999999888753
No 103
>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal
Probab=100.00 E-value=2.3e-39 Score=318.17 Aligned_cols=240 Identities=25% Similarity=0.338 Sum_probs=190.1
Q ss_pred cccccccceeEEEEEecCCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccC-CCCCccccceEEec
Q 011360 198 EKIGSGGCGEVYKAELPGSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQI-RHRNILPLLAHMVR 276 (487)
Q Consensus 198 ~~lg~G~~g~v~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpnIv~l~~~~~~ 276 (487)
+.||+|+||.||+|+. ..+++.||+|++.. ...........+..|..++..+ .||||+++++++..
T Consensus 1 ~~lg~G~~g~V~~~~~-~~~~~~~aiK~~~~------------~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~ 67 (320)
T cd05590 1 RVLGKGSFGKVMLARL-KESGRLYAVKVLKK------------DVILQDDDVECTMTEKRILSLARNHPFLTQLYCCFQT 67 (320)
T ss_pred CeeeeCCCeEEEEEEE-cCCCCEEEEEEEEH------------HHHhhccHHHHHHHHHHHHHhccCCCchhceeeEEEc
Confidence 3689999999999975 45788999998732 1111223445667788877766 79999999999999
Q ss_pred CCeeEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCCEEEecc
Q 011360 277 PDCHLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVLLNDDMEACISDL 356 (487)
Q Consensus 277 ~~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nill~~~~~~kl~DF 356 (487)
.+.+|+||||+++|+|.+++.. ...+++..+..++.|++.||.|| |++||+||||||+|||++.++.+||+||
T Consensus 68 ~~~~~iv~Ey~~~g~L~~~i~~----~~~l~~~~~~~~~~ql~~~L~~l---H~~~ivH~dlkp~NIli~~~~~~kL~Df 140 (320)
T cd05590 68 PDRLFFVMEFVNGGDLMFHIQK----SRRFDEARARFYAAEITSALMFL---HDKGIIYRDLKLDNVLLDHEGHCKLADF 140 (320)
T ss_pred CCEEEEEEcCCCCchHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHH---HHCCeEeCCCCHHHeEECCCCcEEEeeC
Confidence 9999999999999999998865 45689999999999999999999 6788999999999999999999999999
Q ss_pred CCccccCCCCceeeEeeecccccccCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCccccCCCCccccHHHHHHHHhcC
Q 011360 357 GLAMAIPDGYTRVLISYVLGTMAYIAPEYFQQPELSEKCDIFSFGMLLISLVRGVPSFVFHQNGEEICSPEWLRKVMNSK 436 (487)
Q Consensus 357 g~s~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DvwslG~~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~ 436 (487)
|++........ ......||+.|+|||++.+..++.++|||||||++|+|++|..||.... ..+....+.. .
T Consensus 141 G~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~------~~~~~~~i~~-~ 211 (320)
T cd05590 141 GMCKEGIFNGK--TTSTFCGTPDYIAPEILQEMLYGPSVDWWAMGVLLYEMLCGHAPFEAEN------EDDLFEAILN-D 211 (320)
T ss_pred CCCeecCcCCC--cccccccCccccCHHHHcCCCCCCccchhhhHHHHHHHhhCCCCCCCCC------HHHHHHHHhc-C
Confidence 99875432211 1234568999999999999899999999999999999999999995332 1222333322 1
Q ss_pred CCCCccCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCCh
Q 011360 437 NPSRAIDPRLPGNGYEKKMLHVLKIAYICTLHDPEERPNS 476 (487)
Q Consensus 437 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~ 476 (487)
.+ ..+.. ...++.+++.+||+.||.+||++
T Consensus 212 ~~--~~~~~--------~~~~~~~li~~~L~~dP~~R~~~ 241 (320)
T cd05590 212 EV--VYPTW--------LSQDAVDILKAFMTKNPTMRLGS 241 (320)
T ss_pred CC--CCCCC--------CCHHHHHHHHHHcccCHHHCCCC
Confidence 11 11111 23568899999999999999998
No 104
>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=4.6e-39 Score=313.90 Aligned_cols=264 Identities=22% Similarity=0.311 Sum_probs=205.2
Q ss_pred ccccccccccccccceeEEEEEec------CCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccC-C
Q 011360 191 EDCFASLEKIGSGGCGEVYKAELP------GSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQI-R 263 (487)
Q Consensus 191 ~~~~~~~~~lg~G~~g~v~~~~~~------~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~ 263 (487)
.++|.+.+.||.|+||.||+|++. ..++..||+|.+.. .........+.+|+.++..+ +
T Consensus 14 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~--------------~~~~~~~~~~~~E~~~l~~l~~ 79 (304)
T cd05101 14 RDKLTLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKD--------------DATEKDLSDLVSEMEMMKMIGK 79 (304)
T ss_pred HHHeeecceeeccCCceEEEEEEeccCCCCCCcceeEEeeeccc--------------ccchHHHHHHHHHHHHHHhhcc
Confidence 456899999999999999999752 12345799997631 11223456788899999999 8
Q ss_pred CCCccccceEEecCCeeEEEEEecCCCCHHHHHhhhhc------------CCCCCChHHHHHHHHHHHHHHHHHHhcCCC
Q 011360 264 HRNILPLLAHMVRPDCHLLVYEFMKNGSLQDILDDVSR------------GRRELDWPSRHRIALGVASGLEYLHMYHSA 331 (487)
Q Consensus 264 hpnIv~l~~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~------------~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~ 331 (487)
||||+++++++......|++|||+++|+|.+++..... ....+++..+..++.|++.||.|| |++
T Consensus 80 h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~L---H~~ 156 (304)
T cd05101 80 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYL---ASQ 156 (304)
T ss_pred CCCchheeEEEecCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHH---HHC
Confidence 99999999999999999999999999999999975321 124578888999999999999999 778
Q ss_pred CeeecCCCCCCEEeCCCCCEEEeccCCccccCCCCceeeEeeecccccccCCcccCCCCCCchhHHHHHHHHHHHHHh-C
Q 011360 332 SIIHGDIKPRNVLLNDDMEACISDLGLAMAIPDGYTRVLISYVLGTMAYIAPEYFQQPELSEKCDIFSFGMLLISLVR-G 410 (487)
Q Consensus 332 givH~Dlkp~Nill~~~~~~kl~DFg~s~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DvwslG~~l~ellt-g 410 (487)
|++||||||+||+++.++.+||+|||+++...............+++.|+|||++.+..++.++||||||+++|+|++ |
T Consensus 157 givH~dlkp~Nili~~~~~~kl~D~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g 236 (304)
T cd05101 157 KCIHRDLAARNVLVTENNVMKIADFGLARDVNNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLG 236 (304)
T ss_pred CeeecccccceEEEcCCCcEEECCCccceecccccccccccCCCCCceeeCchhhccCCCCchhhHHHHHHHHHHHHcCC
Confidence 899999999999999999999999999987644332222223345678999999998889999999999999999998 7
Q ss_pred CCCccccCCCCccccHHHHHHHHhcCCCCCccCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCChHHHHHHHhhhC
Q 011360 411 VPSFVFHQNGEEICSPEWLRKVMNSKNPSRAIDPRLPGNGYEKKMLHVLKIAYICTLHDPEERPNSQYVRCRLSQLL 487 (487)
Q Consensus 411 ~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~~il~~L~~ll 487 (487)
..||... ...+..... ...... . .+ ...+.++.+++.+||+.+|++|||+.++++.|++++
T Consensus 237 ~~p~~~~------~~~~~~~~~-~~~~~~-~----~~----~~~~~~~~~li~~cl~~~p~~Rps~~e~l~~l~~~~ 297 (304)
T cd05101 237 GSPYPGI------PVEELFKLL-KEGHRM-D----KP----ANCTNELYMMMRDCWHAIPSHRPTFKQLVEDLDRIL 297 (304)
T ss_pred CCCcccC------CHHHHHHHH-HcCCcC-C----CC----CCCCHHHHHHHHHHcccChhhCCCHHHHHHHHHHHH
Confidence 8888332 122222222 222111 0 11 122356889999999999999999999999998763
No 105
>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=6.9e-40 Score=314.37 Aligned_cols=250 Identities=22% Similarity=0.307 Sum_probs=211.7
Q ss_pred cccccccccccccceeEEEEEecCCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCCCCccccc
Q 011360 192 DCFASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQIRHRNILPLL 271 (487)
Q Consensus 192 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~ 271 (487)
..|.+.+.||+|.|..|-+|++ ..+|..||||++.. .........++.+|+..|+.++|||||++|
T Consensus 18 GLYDLekTlG~GHFAVVKLArH-VFTGekVAVKviDK-------------TKlD~~st~hlfqEVRCMKLVQHpNiVRLY 83 (864)
T KOG4717|consen 18 GLYDLEKTLGRGHFAVVKLARH-VFTGEKVAVKVIDK-------------TKLDTLSTGHLFQEVRCMKLVQHPNIVRLY 83 (864)
T ss_pred eeehhhhhhcCCceehhhhhhh-hcccceeEEEEecc-------------cccchhhhhHHHHHHHHHHHhcCcCeeeee
Confidence 3588889999999999999974 57999999999832 344455667889999999999999999999
Q ss_pred eEEecCCeeEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeC-CCCC
Q 011360 272 AHMVRPDCHLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVLLN-DDME 350 (487)
Q Consensus 272 ~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nill~-~~~~ 350 (487)
.+......+|+|+|+-++|+|++||-++ ...+.+....+++.||+.|+.|+|+.| +|||||||+|+.+. .-|.
T Consensus 84 EViDTQTKlyLiLELGD~GDl~DyImKH---e~Gl~E~La~kYF~QI~~AI~YCHqLH---VVHRDLKPENVVFFEKlGl 157 (864)
T KOG4717|consen 84 EVIDTQTKLYLILELGDGGDLFDYIMKH---EEGLNEDLAKKYFAQIVHAISYCHQLH---VVHRDLKPENVVFFEKLGL 157 (864)
T ss_pred ehhcccceEEEEEEecCCchHHHHHHhh---hccccHHHHHHHHHHHHHHHHHHhhhh---hhcccCCcceeEEeeecCc
Confidence 9999999999999999999999999864 456889999999999999999998888 99999999998875 5689
Q ss_pred EEEeccCCccccCCCCceeeEeeecccccccCCcccCCCCCC-chhHHHHHHHHHHHHHhCCCCccccCCCCccccHHHH
Q 011360 351 ACISDLGLAMAIPDGYTRVLISYVLGTMAYIAPEYFQQPELS-EKCDIFSFGMLLISLVRGVPSFVFHQNGEEICSPEWL 429 (487)
Q Consensus 351 ~kl~DFg~s~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~-~~~DvwslG~~l~elltg~~pf~~~~~~~~~~~~~~~ 429 (487)
|||+|||++..+.++... .+.+|+..|.|||++.+..|+ +++||||||++||.|.+|++||....+ .+-+
T Consensus 158 VKLTDFGFSNkf~PG~kL---~TsCGSLAYSAPEILLGDsYDAPAVDiWSLGVILyMLVCGq~PFqeAND------SETL 228 (864)
T KOG4717|consen 158 VKLTDFGFSNKFQPGKKL---TTSCGSLAYSAPEILLGDSYDAPAVDIWSLGVILYMLVCGQPPFQEAND------SETL 228 (864)
T ss_pred eEeeeccccccCCCcchh---hcccchhhccCchhhhcCccCCcchhhhHHHHHHHHHHhCCCccccccc------hhhh
Confidence 999999999887766543 567899999999999999997 678999999999999999999954433 2333
Q ss_pred HHHHhcCCCCCccCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCChHHHHH
Q 011360 430 RKVMNSKNPSRAIDPRLPGNGYEKKMLHVLKIAYICTLHDPEERPNSQYVRC 481 (487)
Q Consensus 430 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~~il~ 481 (487)
..++.... ..+...+.++.+||..||..||.+|.|.++|..
T Consensus 229 TmImDCKY-----------tvPshvS~eCrdLI~sMLvRdPkkRAslEeI~s 269 (864)
T KOG4717|consen 229 TMIMDCKY-----------TVPSHVSKECRDLIQSMLVRDPKKRASLEEIVS 269 (864)
T ss_pred hhhhcccc-----------cCchhhhHHHHHHHHHHHhcCchhhccHHHHhc
Confidence 33333221 123456788999999999999999999999864
No 106
>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in
Probab=100.00 E-value=1e-39 Score=326.86 Aligned_cols=255 Identities=21% Similarity=0.286 Sum_probs=199.6
Q ss_pred cccccccccccccceeEEEEEecCCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCCCCccccc
Q 011360 192 DCFASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQIRHRNILPLL 271 (487)
Q Consensus 192 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~ 271 (487)
++|.+.+.||.|+||.||+++. ..++..||+|.+.. ...........+..|+.+++.++||||++++
T Consensus 43 ~~y~~~~~lg~G~~g~Vy~~~~-~~~~~~~aiK~~~~------------~~~~~~~~~~~~~~e~~il~~~~h~~iv~~~ 109 (370)
T cd05596 43 EDFDVIKVIGRGAFGEVQLVRH-KSSKQVYAMKLLSK------------FEMIKRSDSAFFWEERDIMAHANSEWIVQLH 109 (370)
T ss_pred HHcEEEEEEeeCCCEEEEEEEE-CCCCCEEEEEEEEH------------HHhhhhhhHHHHHHHHHHHHhCCCCCcceEE
Confidence 4699999999999999999975 45789999998832 0111223345577899999999999999999
Q ss_pred eEEecCCeeEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCCE
Q 011360 272 AHMVRPDCHLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVLLNDDMEA 351 (487)
Q Consensus 272 ~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nill~~~~~~ 351 (487)
+++.+++..|+||||++||+|.+++.. ..+++..+..++.|++.||.|| |++||+||||||+|||++.++.+
T Consensus 110 ~~~~~~~~~~lv~Ey~~gg~L~~~l~~-----~~l~~~~~~~~~~qi~~aL~~L---H~~~ivHrDLkp~NILl~~~~~~ 181 (370)
T cd05596 110 YAFQDDKYLYMVMEYMPGGDLVNLMSN-----YDIPEKWARFYTAEVVLALDAI---HSMGFIHRDVKPDNMLLDKSGHL 181 (370)
T ss_pred EEEecCCEEEEEEcCCCCCcHHHHHHh-----cCCCHHHHHHHHHHHHHHHHHH---HHCCeeccCCCHHHEEEcCCCCE
Confidence 999999999999999999999999864 3578888999999999999999 67889999999999999999999
Q ss_pred EEeccCCccccCCCCceeeEeeecccccccCCcccCCC----CCCchhHHHHHHHHHHHHHhCCCCccccCCCCccccHH
Q 011360 352 CISDLGLAMAIPDGYTRVLISYVLGTMAYIAPEYFQQP----ELSEKCDIFSFGMLLISLVRGVPSFVFHQNGEEICSPE 427 (487)
Q Consensus 352 kl~DFg~s~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~----~~~~~~DvwslG~~l~elltg~~pf~~~~~~~~~~~~~ 427 (487)
||+|||++......... ......||+.|+|||++.+. .++.++|||||||++|||++|..||..... ..
T Consensus 182 kL~DfG~~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~------~~ 254 (370)
T cd05596 182 KLADFGTCMKMDANGMV-RCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSL------VG 254 (370)
T ss_pred EEEeccceeeccCCCcc-cCCCCCCCcCeECHHHhccCCCCCCCCCceeeeehhHHHHHHHhCCCCcCCCCH------HH
Confidence 99999999765432211 11345699999999998653 478999999999999999999999954321 22
Q ss_pred HHHHHHhcCCCCCccCCCCCCCCcHHHHHHHHHHHhhccCCCCCC--CCChHHHHH
Q 011360 428 WLRKVMNSKNPSRAIDPRLPGNGYEKKMLHVLKIAYICTLHDPEE--RPNSQYVRC 481 (487)
Q Consensus 428 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~--RPs~~~il~ 481 (487)
....+...... .. ++. ....+.++.+++.+||..+|++ |||+.+++.
T Consensus 255 ~~~~i~~~~~~-~~----~~~--~~~~s~~~~~li~~~L~~~p~r~~R~s~~ell~ 303 (370)
T cd05596 255 TYSKIMDHKNS-LT----FPD--DIEISKQAKDLICAFLTDREVRLGRNGVDEIKS 303 (370)
T ss_pred HHHHHHcCCCc-CC----CCC--cCCCCHHHHHHHHHHccChhhccCCCCHHHHhc
Confidence 23333322111 11 111 1123456889999999999988 999999875
No 107
>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological
Probab=100.00 E-value=2.2e-39 Score=311.65 Aligned_cols=262 Identities=21% Similarity=0.316 Sum_probs=203.9
Q ss_pred ccccccccccccccceeEEEEEecC----CCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCCCC
Q 011360 191 EDCFASLEKIGSGGCGEVYKAELPG----SNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQIRHRN 266 (487)
Q Consensus 191 ~~~~~~~~~lg~G~~g~v~~~~~~~----~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpn 266 (487)
.++|.+.+.||.|+||.||+|.... .++..||+|.+.. .........+.+|+.++..++|||
T Consensus 5 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~--------------~~~~~~~~~~~~e~~~l~~~~~~~ 70 (277)
T cd05032 5 REKITLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNE--------------NASMRERIEFLNEASVMKEFNCHH 70 (277)
T ss_pred hHHeeEEeEecCCCCceEEEEEEeccCCCCcceeEEEEecCC--------------ccCHHHHHHHHHHHHHHHhCCCCc
Confidence 4569999999999999999997642 3457899998632 111223346778999999999999
Q ss_pred ccccceEEecCCeeEEEEEecCCCCHHHHHhhhhcC------CCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCC
Q 011360 267 ILPLLAHMVRPDCHLLVYEFMKNGSLQDILDDVSRG------RRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKP 340 (487)
Q Consensus 267 Iv~l~~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~------~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp 340 (487)
|+++++++......++||||+++|+|.+++...... ...+++..+..++.|++.||.|| |+.|++||||||
T Consensus 71 i~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~l---H~~~i~H~di~p 147 (277)
T cd05032 71 VVRLLGVVSTGQPTLVVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYL---AAKKFVHRDLAA 147 (277)
T ss_pred eeEEEEEEcCCCCcEEEEecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHH---HhCCccccccCh
Confidence 999999999999999999999999999999753221 23478889999999999999999 678899999999
Q ss_pred CCEEeCCCCCEEEeccCCccccCCCCceeeEeeecccccccCCcccCCCCCCchhHHHHHHHHHHHHHh-CCCCccccCC
Q 011360 341 RNVLLNDDMEACISDLGLAMAIPDGYTRVLISYVLGTMAYIAPEYFQQPELSEKCDIFSFGMLLISLVR-GVPSFVFHQN 419 (487)
Q Consensus 341 ~Nill~~~~~~kl~DFg~s~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DvwslG~~l~ellt-g~~pf~~~~~ 419 (487)
+||+++.++.+||+|||+++...............++..|+|||.+.+..++.++||||||+++||++| |..||...+.
T Consensus 148 ~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~ 227 (277)
T cd05032 148 RNCMVAEDLTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTKSDVWSFGVVLWEMATLAEQPYQGLSN 227 (277)
T ss_pred heEEEcCCCCEEECCcccchhhccCcccccCCCCCccccccCHHHHhcCCCCcccchHHHHHHHHHhhccCCCCCccCCH
Confidence 999999999999999999876544322222233446789999999988889999999999999999998 8999943221
Q ss_pred CCccccHHHHHHHHhcCCCCCccCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCChHHHHHHHhh
Q 011360 420 GEEICSPEWLRKVMNSKNPSRAIDPRLPGNGYEKKMLHVLKIAYICTLHDPEERPNSQYVRCRLSQ 485 (487)
Q Consensus 420 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~~il~~L~~ 485 (487)
.+... ........ ..+.. .+..+.+++.+||+.+|++|||+.+|++.|+.
T Consensus 228 ------~~~~~-~~~~~~~~-----~~~~~----~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~ 277 (277)
T cd05032 228 ------EEVLK-FVIDGGHL-----DLPEN----CPDKLLELMRMCWQYNPKMRPTFLEIVSSLKD 277 (277)
T ss_pred ------HHHHH-HHhcCCCC-----CCCCC----CCHHHHHHHHHHcCCChhhCCCHHHHHHHhcC
Confidence 12222 22222111 11111 13568899999999999999999999998863
No 108
>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta
Probab=100.00 E-value=3.9e-39 Score=311.97 Aligned_cols=264 Identities=20% Similarity=0.294 Sum_probs=203.0
Q ss_pred hccccccccccccccceeEEEEEecC----CCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCCC
Q 011360 190 KEDCFASLEKIGSGGCGEVYKAELPG----SNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQIRHR 265 (487)
Q Consensus 190 ~~~~~~~~~~lg~G~~g~v~~~~~~~----~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp 265 (487)
..++|.+.+.||.|+||.||+|.... ..+..||+|.+... ........+.+|+.+++.++||
T Consensus 4 ~~~~~~i~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~--------------~~~~~~~~~~~e~~~l~~l~~~ 69 (288)
T cd05061 4 SREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNES--------------ASLRERIEFLNEASVMKGFTCH 69 (288)
T ss_pred cHHHceeeeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCc--------------CCHHHHHHHHHHHHHHHhCCCC
Confidence 34579999999999999999997532 24568999976321 1112234577899999999999
Q ss_pred CccccceEEecCCeeEEEEEecCCCCHHHHHhhhhc------CCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCC
Q 011360 266 NILPLLAHMVRPDCHLLVYEFMKNGSLQDILDDVSR------GRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIK 339 (487)
Q Consensus 266 nIv~l~~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~------~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlk 339 (487)
||+++++++...+..|+||||+++|+|.+++..... .....++..+..++.|++.||.|| |++||+|||||
T Consensus 70 ~i~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~l---H~~~i~H~dik 146 (288)
T cd05061 70 HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYL---NAKKFVHRDLA 146 (288)
T ss_pred CeeeEEEEEcCCCCcEEEEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHH---HhCCCcCCCCC
Confidence 999999999999999999999999999999975321 123456678889999999999999 77889999999
Q ss_pred CCCEEeCCCCCEEEeccCCccccCCCCceeeEeeecccccccCCcccCCCCCCchhHHHHHHHHHHHHHh-CCCCccccC
Q 011360 340 PRNVLLNDDMEACISDLGLAMAIPDGYTRVLISYVLGTMAYIAPEYFQQPELSEKCDIFSFGMLLISLVR-GVPSFVFHQ 418 (487)
Q Consensus 340 p~Nill~~~~~~kl~DFg~s~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DvwslG~~l~ellt-g~~pf~~~~ 418 (487)
|+||+++.++.++|+|||+++...............++..|+|||.+.+..++.++|+|||||++|||++ |..||....
T Consensus 147 p~nili~~~~~~~L~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~DvwslG~~l~el~~~~~~p~~~~~ 226 (288)
T cd05061 147 ARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLS 226 (288)
T ss_pred hheEEEcCCCcEEECcCCccccccccccccccCCCcccccccCHHHhccCCCChHhHHHHHHHHHHHHHhCCCCCCCCCC
Confidence 9999999999999999999876543322111122345678999999998899999999999999999999 688884322
Q ss_pred CCCccccHHHHHHHHhcCCCCCccCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCChHHHHHHHhhh
Q 011360 419 NGEEICSPEWLRKVMNSKNPSRAIDPRLPGNGYEKKMLHVLKIAYICTLHDPEERPNSQYVRCRLSQL 486 (487)
Q Consensus 419 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~~il~~L~~l 486 (487)
..+..........+. .+.. .+..+.+++.+||+.+|++|||+.++++.|++.
T Consensus 227 ------~~~~~~~~~~~~~~~--~~~~--------~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~~ 278 (288)
T cd05061 227 ------NEQVLKFVMDGGYLD--QPDN--------CPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDD 278 (288)
T ss_pred ------HHHHHHHHHcCCCCC--CCCC--------CCHHHHHHHHHHcCCChhHCcCHHHHHHHHHhh
Confidence 122233232222211 1111 125689999999999999999999999999864
No 109
>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien
Probab=100.00 E-value=9.9e-40 Score=321.64 Aligned_cols=245 Identities=20% Similarity=0.284 Sum_probs=193.7
Q ss_pred cccccccceeEEEEEecCCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCCCCccccceEEecC
Q 011360 198 EKIGSGGCGEVYKAELPGSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQIRHRNILPLLAHMVRP 277 (487)
Q Consensus 198 ~~lg~G~~g~v~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~ 277 (487)
+.||+|+||.||++.. ..++..||+|.+... ..........+..|+.++..++||||+++++++...
T Consensus 1 ~~lG~G~~g~V~~~~~-~~~~~~~a~K~~~~~------------~~~~~~~~~~~~~e~~~l~~~~hp~i~~~~~~~~~~ 67 (325)
T cd05594 1 KLLGKGTFGKVILVKE-KATGRYYAMKILKKE------------VIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTH 67 (325)
T ss_pred CeeeeCCCEEEEEEEE-CCCCCEEEEEEEEHH------------HhhhhhHHHHHHHHHHHHHhCCCCCCCceEEEEEcC
Confidence 4689999999999974 468899999988421 111223345667899999999999999999999999
Q ss_pred CeeEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCC-CCeeecCCCCCCEEeCCCCCEEEecc
Q 011360 278 DCHLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHS-ASIIHGDIKPRNVLLNDDMEACISDL 356 (487)
Q Consensus 278 ~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~-~givH~Dlkp~Nill~~~~~~kl~DF 356 (487)
+.+|+||||+++|+|..++.. ...+++..+..++.|++.||.|| |+ .||+||||||+|||++.++.+||+||
T Consensus 68 ~~~~lv~E~~~~~~L~~~l~~----~~~l~~~~~~~~~~qi~~aL~~l---H~~~~ivHrDikp~NIll~~~~~~kL~Df 140 (325)
T cd05594 68 DRLCFVMEYANGGELFFHLSR----ERVFSEDRARFYGAEIVSALDYL---HSEKNVVYRDLKLENLMLDKDGHIKITDF 140 (325)
T ss_pred CEEEEEEeCCCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHH---HhcCCEEecCCCCCeEEECCCCCEEEecC
Confidence 999999999999999988864 45689999999999999999999 64 78999999999999999999999999
Q ss_pred CCccccCCCCceeeEeeecccccccCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCccccCCCCccccHHHHHHHHhcC
Q 011360 357 GLAMAIPDGYTRVLISYVLGTMAYIAPEYFQQPELSEKCDIFSFGMLLISLVRGVPSFVFHQNGEEICSPEWLRKVMNSK 436 (487)
Q Consensus 357 g~s~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DvwslG~~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~ 436 (487)
|++......... .....||+.|+|||++.+..++.++|||||||++|+|+||..||..... ........ ..
T Consensus 141 g~~~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tG~~Pf~~~~~------~~~~~~i~-~~ 211 (325)
T cd05594 141 GLCKEGIKDGAT--MKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH------EKLFELIL-ME 211 (325)
T ss_pred CCCeecCCCCcc--cccccCCcccCCHHHHccCCCCCccccccccceeeeeccCCCCCCCCCH------HHHHHHHh-cC
Confidence 998753322111 1345699999999999988999999999999999999999999944321 12222221 11
Q ss_pred CCCCccCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCC-----ChHHHHH
Q 011360 437 NPSRAIDPRLPGNGYEKKMLHVLKIAYICTLHDPEERP-----NSQYVRC 481 (487)
Q Consensus 437 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RP-----s~~~il~ 481 (487)
.. .++.. ...++.+++.+||+.||++|| ++.++++
T Consensus 212 ~~------~~p~~----~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~ 251 (325)
T cd05594 212 EI------RFPRT----LSPEAKSLLSGLLKKDPKQRLGGGPDDAKEIMQ 251 (325)
T ss_pred CC------CCCCC----CCHHHHHHHHHHhhcCHHHhCCCCCCCHHHHhc
Confidence 11 11111 224588999999999999997 8888874
No 110
>PLN00034 mitogen-activated protein kinase kinase; Provisional
Probab=100.00 E-value=2.3e-39 Score=322.71 Aligned_cols=249 Identities=25% Similarity=0.372 Sum_probs=191.6
Q ss_pred cccccccccccccceeEEEEEecCCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCCCCccccc
Q 011360 192 DCFASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQIRHRNILPLL 271 (487)
Q Consensus 192 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~ 271 (487)
+.|...+.||.|+||.||+|++ ..+++.||||++... ........+.+|+.+++.++||||++++
T Consensus 74 ~~~~~~~~lg~G~~g~V~~~~~-~~~~~~vaiK~~~~~--------------~~~~~~~~~~~E~~~l~~l~h~~iv~~~ 138 (353)
T PLN00034 74 SELERVNRIGSGAGGTVYKVIH-RPTGRLYALKVIYGN--------------HEDTVRRQICREIEILRDVNHPNVVKCH 138 (353)
T ss_pred HHHhhhhhccCCCCeEEEEEEE-CCCCCEEEEEEEecC--------------CcHHHHHHHHHHHHHHHhCCCCCcceee
Confidence 3578889999999999999975 457899999987321 1223345678999999999999999999
Q ss_pred eEEecCCeeEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCCE
Q 011360 272 AHMVRPDCHLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVLLNDDMEA 351 (487)
Q Consensus 272 ~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nill~~~~~~ 351 (487)
+++...+.+++||||+++|+|.+. ....+..+..++.|++.||.|| |++||+||||||+|||++.++.+
T Consensus 139 ~~~~~~~~~~lv~e~~~~~~L~~~--------~~~~~~~~~~i~~qi~~aL~~L---H~~~ivHrDlkp~NIll~~~~~~ 207 (353)
T PLN00034 139 DMFDHNGEIQVLLEFMDGGSLEGT--------HIADEQFLADVARQILSGIAYL---HRRHIVHRDIKPSNLLINSAKNV 207 (353)
T ss_pred eEeccCCeEEEEEecCCCCccccc--------ccCCHHHHHHHHHHHHHHHHHH---HHCCEeecCCCHHHEEEcCCCCE
Confidence 999999999999999999998643 2345677888999999999999 67889999999999999999999
Q ss_pred EEeccCCccccCCCCceeeEeeecccccccCCcccCC-----CCCCchhHHHHHHHHHHHHHhCCCCccccCCCCccccH
Q 011360 352 CISDLGLAMAIPDGYTRVLISYVLGTMAYIAPEYFQQ-----PELSEKCDIFSFGMLLISLVRGVPSFVFHQNGEEICSP 426 (487)
Q Consensus 352 kl~DFg~s~~~~~~~~~~~~~~~~gt~~y~aPE~l~~-----~~~~~~~DvwslG~~l~elltg~~pf~~~~~~~~~~~~ 426 (487)
||+|||++......... .....||..|+|||++.. ...+.++|||||||++|||++|+.||...... ...
T Consensus 208 kL~DfG~~~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~---~~~ 282 (353)
T PLN00034 208 KIADFGVSRILAQTMDP--CNSSVGTIAYMSPERINTDLNHGAYDGYAGDIWSLGVSILEFYLGRFPFGVGRQG---DWA 282 (353)
T ss_pred EEcccccceeccccccc--ccccccCccccCccccccccccCcCCCcchhHHHHHHHHHHHHhCCCCCCCCCCc---cHH
Confidence 99999999765433211 134568999999998753 23456899999999999999999999632211 111
Q ss_pred HHHHHHHhcCCCCCccCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCChHHHHH
Q 011360 427 EWLRKVMNSKNPSRAIDPRLPGNGYEKKMLHVLKIAYICTLHDPEERPNSQYVRC 481 (487)
Q Consensus 427 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~~il~ 481 (487)
...........+ ..+ .....++.+++.+||+.||++|||+.++++
T Consensus 283 ~~~~~~~~~~~~------~~~----~~~~~~l~~li~~~l~~~P~~Rpt~~ell~ 327 (353)
T PLN00034 283 SLMCAICMSQPP------EAP----ATASREFRHFISCCLQREPAKRWSAMQLLQ 327 (353)
T ss_pred HHHHHHhccCCC------CCC----CccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 111111111111 011 122356899999999999999999999986
No 111
>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase. Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor
Probab=100.00 E-value=6.2e-40 Score=323.85 Aligned_cols=255 Identities=22% Similarity=0.273 Sum_probs=201.1
Q ss_pred ccccccccccccceeEEEEEecCCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCCCCccccce
Q 011360 193 CFASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQIRHRNILPLLA 272 (487)
Q Consensus 193 ~~~~~~~lg~G~~g~v~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~ 272 (487)
+|.+.+.||.|+||.||++.. ..+++.||+|++.. ...........+.+|+.++..++||||+++++
T Consensus 2 ~y~~~~~lg~G~~g~Vy~~~~-~~~~~~~aiK~~~~------------~~~~~~~~~~~~~~e~~i~~~~~~~~i~~~~~ 68 (330)
T cd05601 2 DFDVKSLVGRGHFGEVQVVRE-KATGDIYAMKVMKK------------SVLLAQETVSFFEEERDILSISNSPWIPQLQY 68 (330)
T ss_pred CceEEEEEEeccCEEEEEEEE-CCCCCEEEEEEEEH------------HHhhhhhHHHHHHHHHHHHHhCCCCCCcceee
Confidence 588999999999999999975 46789999998842 11112334566788999999999999999999
Q ss_pred EEecCCeeEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCCEE
Q 011360 273 HMVRPDCHLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVLLNDDMEAC 352 (487)
Q Consensus 273 ~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nill~~~~~~k 352 (487)
++.+.+..|+||||+++|+|.+++... ...+++..+..++.|++.||.|| |+.||+||||||+||+++.++.+|
T Consensus 69 ~~~~~~~~~lv~e~~~~~~L~~~l~~~---~~~l~~~~~~~~~~qi~~aL~~l---H~~~i~H~Dlkp~NIll~~~~~~k 142 (330)
T cd05601 69 AFQDKDNLYLVMEYQPGGDLLSLLNRY---EDQFDEDMAQFYLAELVLAIHSV---HQMGYVHRDIKPENVLIDRTGHIK 142 (330)
T ss_pred EEecCCeEEEEECCCCCCCHHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHH---HHCCeEcccCchHheEECCCCCEE
Confidence 999999999999999999999998752 35689999999999999999999 778899999999999999999999
Q ss_pred EeccCCccccCCCCceeeEeeecccccccCCcccC------CCCCCchhHHHHHHHHHHHHHhCCCCccccCCCCccccH
Q 011360 353 ISDLGLAMAIPDGYTRVLISYVLGTMAYIAPEYFQ------QPELSEKCDIFSFGMLLISLVRGVPSFVFHQNGEEICSP 426 (487)
Q Consensus 353 l~DFg~s~~~~~~~~~~~~~~~~gt~~y~aPE~l~------~~~~~~~~DvwslG~~l~elltg~~pf~~~~~~~~~~~~ 426 (487)
|+|||++......... ......||+.|+|||++. ...++.++|||||||++|+|++|..||..... .
T Consensus 143 L~Dfg~a~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~------~ 215 (330)
T cd05601 143 LADFGSAARLTANKMV-NSKLPVGTPDYIAPEVLTTMNGDGKGTYGVECDWWSLGVIAYEMIYGRSPFHEGTS------A 215 (330)
T ss_pred eccCCCCeECCCCCce-eeecccCCccccCHHHhccccccccCCCCCcceeecccceeeeeccCCCCCCCCCH------H
Confidence 9999999876543322 223346899999999986 45678999999999999999999999943321 2
Q ss_pred HHHHHHHhcCCCCCccCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCChHHHHH
Q 011360 427 EWLRKVMNSKNPSRAIDPRLPGNGYEKKMLHVLKIAYICTLHDPEERPNSQYVRC 481 (487)
Q Consensus 427 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~~il~ 481 (487)
.....+........ .+. ....+..+.+++..||. +|.+|||+.++++
T Consensus 216 ~~~~~i~~~~~~~~-----~~~--~~~~~~~~~~li~~ll~-~p~~R~t~~~l~~ 262 (330)
T cd05601 216 KTYNNIMNFQRFLK-----FPE--DPKVSSDFLDLIQSLLC-GQKERLGYEGLCC 262 (330)
T ss_pred HHHHHHHcCCCccC-----CCC--CCCCCHHHHHHHHHHcc-ChhhCCCHHHHhC
Confidence 22333332221111 111 01123568889999998 9999999999874
No 112
>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o
Probab=100.00 E-value=2.4e-39 Score=319.24 Aligned_cols=247 Identities=22% Similarity=0.311 Sum_probs=191.5
Q ss_pred cccccccceeEEEEEecCCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccC-CCCCccccceEEec
Q 011360 198 EKIGSGGCGEVYKAELPGSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQI-RHRNILPLLAHMVR 276 (487)
Q Consensus 198 ~~lg~G~~g~v~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpnIv~l~~~~~~ 276 (487)
+.||+|+||.||++.. ..+++.||+|++... ..........+..|..++.++ +||||+++++++..
T Consensus 1 ~~lG~G~~g~V~~~~~-~~~~~~~aiK~~~~~------------~~~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~~ 67 (329)
T cd05618 1 RVIGRGSYAKVLLVRL-KKTERIYAMKVVKKE------------LVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQT 67 (329)
T ss_pred CeeeeCCCeEEEEEEE-CCCCCEEEEEEEEhh------------HhcchhHHHHHHHHHHHHHhcCCCCcCCceeeEEEe
Confidence 4699999999999975 457889999988421 111223445677888887766 89999999999999
Q ss_pred CCeeEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCCEEEecc
Q 011360 277 PDCHLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVLLNDDMEACISDL 356 (487)
Q Consensus 277 ~~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nill~~~~~~kl~DF 356 (487)
.+..|+||||+++|+|..++.. ...+++..+..++.|++.||.|| |++||+||||||+||+++.++.+||+||
T Consensus 68 ~~~~~lv~E~~~~~~L~~~~~~----~~~l~~~~~~~i~~qi~~~l~~l---H~~~ivH~Dikp~Nili~~~~~~kL~Df 140 (329)
T cd05618 68 ESRLFFVIEYVNGGDLMFHMQR----QRKLPEEHARFYSAEISLALNYL---HERGIIYRDLKLDNVLLDSEGHIKLTDY 140 (329)
T ss_pred CCEEEEEEeCCCCCCHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHH---HHCCeeeCCCCHHHEEECCCCCEEEeeC
Confidence 9999999999999999988864 45689999999999999999999 6778999999999999999999999999
Q ss_pred CCccccCCCCceeeEeeecccccccCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCccccCCCC--ccccHHHHHHHHh
Q 011360 357 GLAMAIPDGYTRVLISYVLGTMAYIAPEYFQQPELSEKCDIFSFGMLLISLVRGVPSFVFHQNGE--EICSPEWLRKVMN 434 (487)
Q Consensus 357 g~s~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DvwslG~~l~elltg~~pf~~~~~~~--~~~~~~~~~~~~~ 434 (487)
|++........ ......||+.|+|||++.+..++.++|||||||++|+|++|..||....... ......+......
T Consensus 141 G~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~i~ 218 (329)
T cd05618 141 GMCKEGLRPGD--TTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVIL 218 (329)
T ss_pred CccccccCCCC--ccccccCCccccCHHHHcCCCCCCccceecccHHHHHHhhCCCCCccCCCcCCcccccHHHHHHHHh
Confidence 99875322211 1134568999999999999999999999999999999999999995322111 1122233333322
Q ss_pred cCCCCCccCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCCh
Q 011360 435 SKNPSRAIDPRLPGNGYEKKMLHVLKIAYICTLHDPEERPNS 476 (487)
Q Consensus 435 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~ 476 (487)
.... .+|.. .+..+.+++.+||+.||++|||+
T Consensus 219 ~~~~------~~p~~----~~~~~~~ll~~~L~~dP~~R~~~ 250 (329)
T cd05618 219 EKQI------RIPRS----LSVKAASVLKSFLNKDPKERLGC 250 (329)
T ss_pred cCCC------CCCCC----CCHHHHHHHHHHhcCCHHHcCCC
Confidence 2221 12211 22458899999999999999984
No 113
>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways
Probab=100.00 E-value=3.9e-39 Score=317.58 Aligned_cols=248 Identities=24% Similarity=0.316 Sum_probs=195.4
Q ss_pred cccccccceeEEEEEecCCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccC-CCCCccccceEEec
Q 011360 198 EKIGSGGCGEVYKAELPGSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQI-RHRNILPLLAHMVR 276 (487)
Q Consensus 198 ~~lg~G~~g~v~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpnIv~l~~~~~~ 276 (487)
+.||+|+||.||++.. ..+++.||+|++.. ...........+..|..++.++ +||||+++++++..
T Consensus 1 ~~lG~G~~g~V~~~~~-~~~~~~~aiK~~~~------------~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~ 67 (327)
T cd05617 1 RVIGRGSYAKVLLVRL-KKNDQIYAMKVVKK------------ELVHDDEDIDWVQTEKHVFEQASSNPFLVGLHSCFQT 67 (327)
T ss_pred CeeeeCCCeEEEEEEE-CCCCCEEEEEEEEH------------HHhhhhhHHHHHHHHHHHHHhhcCCCCEeeEEEEEEe
Confidence 3699999999999975 45788999998842 1112233456678888888888 79999999999999
Q ss_pred CCeeEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCCEEEecc
Q 011360 277 PDCHLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVLLNDDMEACISDL 356 (487)
Q Consensus 277 ~~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nill~~~~~~kl~DF 356 (487)
.+.+|+||||+++|+|..++.. ...+++..+..++.|++.||.|| |++||+||||||+|||++.++.+||+||
T Consensus 68 ~~~~~lv~e~~~~~~L~~~~~~----~~~l~~~~~~~~~~qi~~al~~l---H~~~ivHrDlkp~Nili~~~~~~kl~Df 140 (327)
T cd05617 68 TSRLFLVIEYVNGGDLMFHMQR----QRKLPEEHARFYAAEICIALNFL---HERGIIYRDLKLDNVLLDADGHIKLTDY 140 (327)
T ss_pred CCEEEEEEeCCCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHH---HHCCeeccCCCHHHEEEeCCCCEEEecc
Confidence 9999999999999999988864 45689999999999999999999 7788999999999999999999999999
Q ss_pred CCccccCCCCceeeEeeecccccccCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCccccCCCCccccHHHHHHHHhcC
Q 011360 357 GLAMAIPDGYTRVLISYVLGTMAYIAPEYFQQPELSEKCDIFSFGMLLISLVRGVPSFVFHQNGEEICSPEWLRKVMNSK 436 (487)
Q Consensus 357 g~s~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DvwslG~~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~ 436 (487)
|++........ ......||+.|+|||++.+..++.++|||||||++|+|++|..||............+.........
T Consensus 141 g~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~ 218 (327)
T cd05617 141 GMCKEGLGPGD--TTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIITDNPDMNTEDYLFQVILEK 218 (327)
T ss_pred ccceeccCCCC--ceecccCCcccCCHHHHCCCCCCchheeehhHHHHHHHHhCCCCCCccCCCcccccHHHHHHHHHhC
Confidence 99875322211 1234679999999999999999999999999999999999999996544333333333443333322
Q ss_pred CCCCccCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCChH
Q 011360 437 NPSRAIDPRLPGNGYEKKMLHVLKIAYICTLHDPEERPNSQ 477 (487)
Q Consensus 437 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~ 477 (487)
.. .+|.. .+..+.+++.+||..||++||+++
T Consensus 219 ~~------~~p~~----~~~~~~~li~~~L~~dP~~R~~~~ 249 (327)
T cd05617 219 PI------RIPRF----LSVKASHVLKGFLNKDPKERLGCQ 249 (327)
T ss_pred CC------CCCCC----CCHHHHHHHHHHhccCHHHcCCCC
Confidence 11 11211 224578999999999999999853
No 114
>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a
Probab=100.00 E-value=1.1e-38 Score=304.96 Aligned_cols=264 Identities=26% Similarity=0.381 Sum_probs=210.1
Q ss_pred cccccccccccccceeEEEEEecCCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCCCCccccc
Q 011360 192 DCFASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQIRHRNILPLL 271 (487)
Q Consensus 192 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~ 271 (487)
++|.+.+.||.|+||.||+|... .+|..||+|.+.... .........+.+|+.++++++|+||++++
T Consensus 2 ~~y~~~~~lg~g~~~~v~~~~~~-~~~~~~~ik~~~~~~------------~~~~~~~~~~~~ei~~l~~~~~~~i~~~~ 68 (267)
T cd08224 2 GNFKIEKKIGKGQFSVVYKAICL-LDGRVVALKKVQIFE------------MMDAKARQDCLKEIDLLKQLDHPNVIKYL 68 (267)
T ss_pred CceeeeeeeccCCceEEEEEEEc-CCCCEEEEEEeeccc------------ccchhhHHHHHHHHHHHHhCCCCCeeeee
Confidence 46899999999999999999754 578999999874311 11122356788899999999999999999
Q ss_pred eEEecCCeeEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCCE
Q 011360 272 AHMVRPDCHLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVLLNDDMEA 351 (487)
Q Consensus 272 ~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nill~~~~~~ 351 (487)
+++...+..++||||+++++|.+++.........+++..+..++.+++.||.|| |+.|++||||+|+||+++.++.+
T Consensus 69 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~l---h~~~i~h~dl~p~nil~~~~~~~ 145 (267)
T cd08224 69 ASFIENNELNIVLELADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSALEHM---HSKRIMHRDIKPANVFITATGVV 145 (267)
T ss_pred eeeecCCeEEEEEecCCCCCHHHHHHHhcccCCCcCHHHHHHHHHHHHHHHHHH---HhCCEecCCcChhhEEECCCCcE
Confidence 999999999999999999999999876545556789999999999999999999 78899999999999999999999
Q ss_pred EEeccCCccccCCCCceeeEeeecccccccCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCccccCCCCccccHHHHHH
Q 011360 352 CISDLGLAMAIPDGYTRVLISYVLGTMAYIAPEYFQQPELSEKCDIFSFGMLLISLVRGVPSFVFHQNGEEICSPEWLRK 431 (487)
Q Consensus 352 kl~DFg~s~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DvwslG~~l~elltg~~pf~~~~~~~~~~~~~~~~~ 431 (487)
+|+|||++......... .....+++.|+|||.+.+..++.++|+||||+++|+|++|..||..... ........
T Consensus 146 ~l~d~~~~~~~~~~~~~--~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~----~~~~~~~~ 219 (267)
T cd08224 146 KLGDLGLGRFFSSKTTA--AHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKM----NLYSLCKK 219 (267)
T ss_pred EEeccceeeeccCCCcc--cceecCCccccCHHHhccCCCCchhcHHHHHHHHHHHHHCCCCcccCCc----cHHHHHhh
Confidence 99999998765433221 1234588899999999988899999999999999999999999843321 11112221
Q ss_pred HHhcCCCCCccCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCChHHHHHHHhhh
Q 011360 432 VMNSKNPSRAIDPRLPGNGYEKKMLHVLKIAYICTLHDPEERPNSQYVRCRLSQL 486 (487)
Q Consensus 432 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~~il~~L~~l 486 (487)
.. .... +..+ .......+.+++.+||..+|++|||+.+|++.|+++
T Consensus 220 ~~-~~~~-----~~~~---~~~~~~~~~~~i~~cl~~~p~~Rp~~~~il~~~~~~ 265 (267)
T cd08224 220 IE-KCDY-----PPLP---ADHYSEELRDLVSRCINPDPEKRPDISYVLQVAKEM 265 (267)
T ss_pred hh-cCCC-----CCCC---hhhcCHHHHHHHHHHcCCCcccCCCHHHHHHHHHHh
Confidence 11 1111 1111 113345688999999999999999999999999875
No 115
>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=100.00 E-value=1.6e-39 Score=321.12 Aligned_cols=257 Identities=20% Similarity=0.310 Sum_probs=198.1
Q ss_pred ccccccccccccceeEEEEEec--CCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccC-CCCCccc
Q 011360 193 CFASLEKIGSGGCGEVYKAELP--GSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQI-RHRNILP 269 (487)
Q Consensus 193 ~~~~~~~lg~G~~g~v~~~~~~--~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpnIv~ 269 (487)
+|.+.+.||+|+||.||+++.. ..++..||+|++... ...........+..|+.++..+ .||||++
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~-----------~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~ 69 (332)
T cd05614 1 NFELLKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKA-----------ALVQKAKTVEHTRTERNVLEHVRQSPFLVT 69 (332)
T ss_pred CceEEEEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHH-----------HHhhhhhHHHHHHHHHHHHHhccCCCCccc
Confidence 3788999999999999999753 246889999987321 0011223345677899999999 5999999
Q ss_pred cceEEecCCeeEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCC
Q 011360 270 LLAHMVRPDCHLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVLLNDDM 349 (487)
Q Consensus 270 l~~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nill~~~~ 349 (487)
+++++...+.+++||||+++|+|.+++.. ...+++..+..++.|++.||.|| |++||+||||||+|||++.++
T Consensus 70 ~~~~~~~~~~~~lv~e~~~~g~L~~~l~~----~~~~~~~~~~~~~~qi~~~l~~l---H~~~ivHrDlkp~Nili~~~~ 142 (332)
T cd05614 70 LHYAFQTEAKLHLILDYVSGGEMFTHLYQ----RDNFSEDEVRFYSGEIILALEHL---HKLGIVYRDIKLENILLDSEG 142 (332)
T ss_pred EEEEEecCCEEEEEEeCCCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHH---HHCCcEecCCCHHHeEECCCC
Confidence 99999999999999999999999999864 45689999999999999999999 778899999999999999999
Q ss_pred CEEEeccCCccccCCCCceeeEeeecccccccCCcccCCC-CCCchhHHHHHHHHHHHHHhCCCCccccCCCCccccHHH
Q 011360 350 EACISDLGLAMAIPDGYTRVLISYVLGTMAYIAPEYFQQP-ELSEKCDIFSFGMLLISLVRGVPSFVFHQNGEEICSPEW 428 (487)
Q Consensus 350 ~~kl~DFg~s~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~-~~~~~~DvwslG~~l~elltg~~pf~~~~~~~~~~~~~~ 428 (487)
.+||+|||+++......... .....||+.|+|||++.+. .++.++|||||||++|+|+||..||........ ....
T Consensus 143 ~~kl~DfG~~~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~--~~~~ 219 (332)
T cd05614 143 HVVLTDFGLSKEFLSEEKER-TYSFCGTIEYMAPEIIRGKGGHGKAVDWWSLGILIFELLTGASPFTLEGERNT--QSEV 219 (332)
T ss_pred CEEEeeCcCCccccccCCCc-cccccCCccccCHHHhcCCCCCCCccccccchhhhhhhhcCCCCCCCCCCCCC--HHHH
Confidence 99999999997653322211 1345699999999998865 478899999999999999999999954332111 1122
Q ss_pred HHHHHhcCCCCCccCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCC-----ChHHHHH
Q 011360 429 LRKVMNSKNPSRAIDPRLPGNGYEKKMLHVLKIAYICTLHDPEERP-----NSQYVRC 481 (487)
Q Consensus 429 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RP-----s~~~il~ 481 (487)
...... ..+ .++. .....+.+++.+||+.||++|| +++++++
T Consensus 220 ~~~~~~-~~~------~~~~----~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~ 266 (332)
T cd05614 220 SRRILK-CDP------PFPS----FIGPEAQDLLHKLLRKDPKKRLGAGPQGASEIKE 266 (332)
T ss_pred HHHHhc-CCC------CCCC----CCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHHc
Confidence 222221 111 1211 1234588999999999999999 6667764
No 116
>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein. Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi
Probab=100.00 E-value=3.9e-39 Score=312.29 Aligned_cols=261 Identities=24% Similarity=0.358 Sum_probs=202.2
Q ss_pred cccccccccccceeEEEEEecC----CCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCCCCccc
Q 011360 194 FASLEKIGSGGCGEVYKAELPG----SNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQIRHRNILP 269 (487)
Q Consensus 194 ~~~~~~lg~G~~g~v~~~~~~~----~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~ 269 (487)
|.+.+.||.|+||.||+|.... .....+++|.+.. .........+.+|+.+++.++||||++
T Consensus 2 ~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~--------------~~~~~~~~~~~~E~~~l~~l~h~~iv~ 67 (290)
T cd05045 2 LVLGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKE--------------NASSSELRDLLSEFNLLKQVNHPHVIK 67 (290)
T ss_pred ccccccccCcCCcceEEEEEecCCCCCcceeEEEEecCC--------------CCCHHHHHHHHHHHHHHhhCCCCCEee
Confidence 6788999999999999997532 1235688887632 111233467889999999999999999
Q ss_pred cceEEecCCeeEEEEEecCCCCHHHHHhhhhc--------------------CCCCCChHHHHHHHHHHHHHHHHHHhcC
Q 011360 270 LLAHMVRPDCHLLVYEFMKNGSLQDILDDVSR--------------------GRRELDWPSRHRIALGVASGLEYLHMYH 329 (487)
Q Consensus 270 l~~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~--------------------~~~~l~~~~~~~i~~qi~~~L~~Lh~~h 329 (487)
+++.+...+..+++|||+.+++|.+++..... ....+++..++.++.|++.||.|| |
T Consensus 68 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~L---H 144 (290)
T cd05045 68 LYGACSQDGPLLLIVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYL---A 144 (290)
T ss_pred EEEEEecCCCcEEEEEecCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHHHHHH---H
Confidence 99999999999999999999999999864221 124578899999999999999999 6
Q ss_pred CCCeeecCCCCCCEEeCCCCCEEEeccCCccccCCCCceeeEeeecccccccCCcccCCCCCCchhHHHHHHHHHHHHHh
Q 011360 330 SASIIHGDIKPRNVLLNDDMEACISDLGLAMAIPDGYTRVLISYVLGTMAYIAPEYFQQPELSEKCDIFSFGMLLISLVR 409 (487)
Q Consensus 330 ~~givH~Dlkp~Nill~~~~~~kl~DFg~s~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DvwslG~~l~ellt 409 (487)
++|++||||||+||++++++.+||+|||+++...............++..|+|||.+.+..++.++||||||+++|+|+|
T Consensus 145 ~~~ivH~dikp~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~t 224 (290)
T cd05045 145 EMKLVHRDLAARNVLVAEGRKMKISDFGLSRDVYEEDSYVKRSKGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVT 224 (290)
T ss_pred HCCeehhhhhhheEEEcCCCcEEeccccccccccCccchhcccCCCCCccccCHHHHccCCcchHhHHHHHHHHHHHHHh
Confidence 78899999999999999999999999999976543322211122345778999999988889999999999999999998
Q ss_pred -CCCCccccCCCCccccHHHHHHHHhcCCCCCccCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCChHHHHHHHhhhC
Q 011360 410 -GVPSFVFHQNGEEICSPEWLRKVMNSKNPSRAIDPRLPGNGYEKKMLHVLKIAYICTLHDPEERPNSQYVRCRLSQLL 487 (487)
Q Consensus 410 -g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~~il~~L~~ll 487 (487)
|..||.... ++.+......... ...+. ..+.++.+++.+||+.+|++|||+.++++.|++++
T Consensus 225 ~g~~p~~~~~-------~~~~~~~~~~~~~-----~~~~~----~~~~~~~~~i~~cl~~~P~~Rp~~~~i~~~l~~~~ 287 (290)
T cd05045 225 LGGNPYPGIA-------PERLFNLLKTGYR-----MERPE----NCSEEMYNLMLTCWKQEPDKRPTFADISKELEKMM 287 (290)
T ss_pred cCCCCCCCCC-------HHHHHHHHhCCCC-----CCCCC----CCCHHHHHHHHHHccCCcccCCCHHHHHHHHHHHH
Confidence 999994332 1222222222111 11111 12356889999999999999999999999999874
No 117
>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to
Probab=100.00 E-value=2.9e-39 Score=317.79 Aligned_cols=245 Identities=22% Similarity=0.328 Sum_probs=193.0
Q ss_pred cccccccceeEEEEEecCCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccC-CCCCccccceEEec
Q 011360 198 EKIGSGGCGEVYKAELPGSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQI-RHRNILPLLAHMVR 276 (487)
Q Consensus 198 ~~lg~G~~g~v~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpnIv~l~~~~~~ 276 (487)
+.||.|+||.||+|+. ..++..||+|++.. ...........+..|..++..+ +||||+++++++..
T Consensus 1 ~~lG~G~~g~Vy~~~~-~~~~~~~aiK~~~~------------~~~~~~~~~~~~~~e~~il~~~~~hp~i~~~~~~~~~ 67 (321)
T cd05591 1 KVLGKGSFGKVMLAEL-KGTDEVYAIKVLKK------------DVILQDDDVDCTMTEKRILALAAKHPFLTALHCCFQT 67 (321)
T ss_pred CccccCCCeEEEEEEE-CCCCCEEEEEEEeH------------HHhhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEc
Confidence 3689999999999975 45788999998732 1111233445667788888765 89999999999999
Q ss_pred CCeeEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCCEEEecc
Q 011360 277 PDCHLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVLLNDDMEACISDL 356 (487)
Q Consensus 277 ~~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nill~~~~~~kl~DF 356 (487)
.+..|+||||+++|+|.+++.. ...+++..+..++.|++.||.|| |++||+||||||+||+++.++.+||+||
T Consensus 68 ~~~~~lv~E~~~~~~L~~~l~~----~~~~~~~~~~~~~~qi~~aL~~L---H~~~ivHrDikp~Nill~~~~~~kL~Df 140 (321)
T cd05591 68 KDRLFFVMEYVNGGDLMFQIQR----SRKFDEPRSRFYAAEVTLALMFL---HRHGVIYRDLKLDNILLDAEGHCKLADF 140 (321)
T ss_pred CCeEEEEEeCCCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHH---HHCCeeccCCCHHHeEECCCCCEEEeec
Confidence 9999999999999999988864 45688999999999999999999 7788999999999999999999999999
Q ss_pred CCccccCCCCceeeEeeecccccccCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCccccCCCCccccHHHHHHHHhcC
Q 011360 357 GLAMAIPDGYTRVLISYVLGTMAYIAPEYFQQPELSEKCDIFSFGMLLISLVRGVPSFVFHQNGEEICSPEWLRKVMNSK 436 (487)
Q Consensus 357 g~s~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DvwslG~~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~ 436 (487)
|++........ ......||+.|+|||++.+..++.++|||||||++|+|++|..||.... ..+.........
T Consensus 141 g~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~Pf~~~~------~~~~~~~i~~~~ 212 (321)
T cd05591 141 GMCKEGILNGV--TTTTFCGTPDYIAPEILQELEYGPSVDWWALGVLMYEMMAGQPPFEADN------EDDLFESILHDD 212 (321)
T ss_pred ccceecccCCc--cccccccCccccCHHHHcCCCCCCccceechhHHHHHHhcCCCCCCCCC------HHHHHHHHHcCC
Confidence 99875432221 1234568999999999999899999999999999999999999994332 122233332221
Q ss_pred CCCCccCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCC-------ChHHHHH
Q 011360 437 NPSRAIDPRLPGNGYEKKMLHVLKIAYICTLHDPEERP-------NSQYVRC 481 (487)
Q Consensus 437 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RP-------s~~~il~ 481 (487)
. ..+.. .+.++.+++.+||+.+|++|| +++++++
T Consensus 213 -~--~~p~~--------~~~~~~~ll~~~L~~dp~~R~~~~~~~~~~~~~~~ 253 (321)
T cd05591 213 -V--LYPVW--------LSKEAVSILKAFMTKNPNKRLGCVASQGGEDAIKQ 253 (321)
T ss_pred -C--CCCCC--------CCHHHHHHHHHHhccCHHHcCCCCCCCCCHHHHhc
Confidence 1 11111 224688999999999999999 7777764
No 118
>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate
Probab=100.00 E-value=6.2e-40 Score=322.14 Aligned_cols=242 Identities=21% Similarity=0.304 Sum_probs=192.5
Q ss_pred cccccccceeEEEEEec--CCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCCCCccccceEEe
Q 011360 198 EKIGSGGCGEVYKAELP--GSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQIRHRNILPLLAHMV 275 (487)
Q Consensus 198 ~~lg~G~~g~v~~~~~~--~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~ 275 (487)
+.||+|+||.||+++.. ..+|..||+|++.. ..........+..|+.++.+++||||+++++++.
T Consensus 2 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~-------------~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~ 68 (318)
T cd05582 2 KVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKK-------------ATLKVRDRVRTKMERDILAEVNHPFIVKLHYAFQ 68 (318)
T ss_pred ceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEH-------------HHhhhhhHHHHHHHHHHHHhCCCCCcccEEEEEE
Confidence 57999999999998642 34789999998842 1111223345678999999999999999999999
Q ss_pred cCCeeEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCCEEEec
Q 011360 276 RPDCHLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVLLNDDMEACISD 355 (487)
Q Consensus 276 ~~~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nill~~~~~~kl~D 355 (487)
.++..|+||||+++|+|.+++.. ...+++..+..++.|++.||.|| |++||+||||||+||+++.++.+||+|
T Consensus 69 ~~~~~~lv~e~~~~~~L~~~l~~----~~~l~~~~~~~~~~qi~~~l~~l---H~~~i~H~dlkp~Nil~~~~~~~kL~D 141 (318)
T cd05582 69 TEGKLYLILDFLRGGDLFTRLSK----EVMFTEEDVKFYLAELALALDHL---HSLGIIYRDLKPENILLDEEGHIKLTD 141 (318)
T ss_pred cCCEEEEEEcCCCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHH---HHCCEecCCCCHHHeEECCCCcEEEee
Confidence 99999999999999999999864 45689999999999999999999 778899999999999999999999999
Q ss_pred cCCccccCCCCceeeEeeecccccccCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCccccCCCCccccHHHHHHHHhc
Q 011360 356 LGLAMAIPDGYTRVLISYVLGTMAYIAPEYFQQPELSEKCDIFSFGMLLISLVRGVPSFVFHQNGEEICSPEWLRKVMNS 435 (487)
Q Consensus 356 Fg~s~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DvwslG~~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~ 435 (487)
||++......... .....||+.|+|||.+.+..++.++|||||||++|+|++|..||.... ..+........
T Consensus 142 fg~~~~~~~~~~~--~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~------~~~~~~~i~~~ 213 (318)
T cd05582 142 FGLSKESIDHEKK--AYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGSLPFQGKD------RKETMTMILKA 213 (318)
T ss_pred ccCCcccCCCCCc--eecccCChhhcCHHHHcCCCCCCccceeccceEeeeeccCCCCCCCCC------HHHHHHHHHcC
Confidence 9998765433221 234568999999999998889999999999999999999999994332 12222222221
Q ss_pred CCCCCccCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCChHH
Q 011360 436 KNPSRAIDPRLPGNGYEKKMLHVLKIAYICTLHDPEERPNSQY 478 (487)
Q Consensus 436 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~~ 478 (487)
. . .+++. .+..+.+++.+||+.||++|||+.+
T Consensus 214 ~-~--~~p~~--------~~~~~~~li~~~l~~~P~~R~~a~~ 245 (318)
T cd05582 214 K-L--GMPQF--------LSPEAQSLLRALFKRNPANRLGAGP 245 (318)
T ss_pred C-C--CCCCC--------CCHHHHHHHHHHhhcCHhHcCCCCC
Confidence 1 1 11111 2245889999999999999999655
No 119
>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C. Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory
Probab=100.00 E-value=5.7e-39 Score=316.10 Aligned_cols=245 Identities=24% Similarity=0.302 Sum_probs=193.2
Q ss_pred ccccccccccccceeEEEEEecCCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCCC-Cccccc
Q 011360 193 CFASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQIRHR-NILPLL 271 (487)
Q Consensus 193 ~~~~~~~lg~G~~g~v~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp-nIv~l~ 271 (487)
+|.+.+.||.|+||.||+|+. ..+++.||+|++... ..........+..|..++..+.|+ +|++++
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~-~~~~~~~avK~~~~~------------~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~ 67 (324)
T cd05587 1 DFNFLMVLGKGSFGKVMLAER-KGTDELYAIKILKKD------------VIIQDDDVECTMVEKRVLALPGKPPFLTQLH 67 (324)
T ss_pred CceEEEEEeeccCeEEEEEEE-CCCCCEEEEEEEEHH------------HhhhhhHHHHHHHHHHHHHhcCCCCceeeeE
Confidence 378899999999999999975 457889999988421 111233456677888899888664 688899
Q ss_pred eEEecCCeeEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCCE
Q 011360 272 AHMVRPDCHLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVLLNDDMEA 351 (487)
Q Consensus 272 ~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nill~~~~~~ 351 (487)
+++...+.+|+||||+++|+|.+++.. ...+++..+..++.|++.||.|| |++||+||||||+|||++.++.+
T Consensus 68 ~~~~~~~~~~lv~E~~~~g~L~~~~~~----~~~~~~~~~~~~~~qi~~al~~l---H~~~ivH~dlkp~Nill~~~~~~ 140 (324)
T cd05587 68 SCFQTMDRLYFVMEYVNGGDLMYHIQQ----VGKFKEPHAVFYAAEIAIGLFFL---HSKGIIYRDLKLDNVMLDAEGHI 140 (324)
T ss_pred EEEEcCCEEEEEEcCCCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHH---HHCCeEecCCCHHHeEEcCCCCE
Confidence 999999999999999999999998864 45688999999999999999999 67889999999999999999999
Q ss_pred EEeccCCccccCCCCceeeEeeecccccccCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCccccCCCCccccHHHHHH
Q 011360 352 CISDLGLAMAIPDGYTRVLISYVLGTMAYIAPEYFQQPELSEKCDIFSFGMLLISLVRGVPSFVFHQNGEEICSPEWLRK 431 (487)
Q Consensus 352 kl~DFg~s~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DvwslG~~l~elltg~~pf~~~~~~~~~~~~~~~~~ 431 (487)
||+|||++........ ......||+.|+|||++.+..++.++|||||||++|+|+||..||.... ..+....
T Consensus 141 kL~Dfg~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~------~~~~~~~ 212 (324)
T cd05587 141 KIADFGMCKENIFGGK--TTRTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGED------EDELFQS 212 (324)
T ss_pred EEeecCcceecCCCCC--ceeeecCCccccChhhhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCC------HHHHHHH
Confidence 9999999865322211 1234569999999999999899999999999999999999999995332 1222222
Q ss_pred HHhcCCCCCccCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCCh
Q 011360 432 VMNSKNPSRAIDPRLPGNGYEKKMLHVLKIAYICTLHDPEERPNS 476 (487)
Q Consensus 432 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~ 476 (487)
... ..+ .++.. .+..+.+++.+||..||.+||+.
T Consensus 213 i~~-~~~------~~~~~----~~~~~~~li~~~l~~~P~~R~~~ 246 (324)
T cd05587 213 IME-HNV------SYPKS----LSKEAVSICKGLLTKHPAKRLGC 246 (324)
T ss_pred HHc-CCC------CCCCC----CCHHHHHHHHHHhhcCHHHcCCC
Confidence 222 111 11111 23468899999999999999986
No 120
>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]
Probab=100.00 E-value=7.3e-40 Score=320.48 Aligned_cols=259 Identities=22% Similarity=0.335 Sum_probs=210.1
Q ss_pred ccccccccccccccceeEEEEEecCC-C--CceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCCCCc
Q 011360 191 EDCFASLEKIGSGGCGEVYKAELPGS-N--GKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQIRHRNI 267 (487)
Q Consensus 191 ~~~~~~~~~lg~G~~g~v~~~~~~~~-~--~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnI 267 (487)
.+.....++||.|-||.||.|.+... . .-.||||.++. .......+.|+.|+.+|+++.||||
T Consensus 388 Re~Itl~r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~--------------d~t~d~tekflqEa~iMrnfdHphI 453 (974)
T KOG4257|consen 388 RELITLKRLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKT--------------DCTPDDTEKFLQEASIMRNFDHPHI 453 (974)
T ss_pred hhhccHHHhhcCCcccceeeeEecccccCcceeeeeehhcc--------------CCChhhHHHHHHHHHHHHhCCCcch
Confidence 34456778899999999999987433 2 34588898732 2344557889999999999999999
Q ss_pred cccceEEecCCeeEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCC
Q 011360 268 LPLLAHMVRPDCHLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVLLND 347 (487)
Q Consensus 268 v~l~~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nill~~ 347 (487)
|+++|++.+ .+.+||||.++.|.|..||+. +...++......++.||+.+|+|| |+..+|||||..+|||+..
T Consensus 454 ikLIGv~~e-~P~WivmEL~~~GELr~yLq~---nk~sL~l~tL~ly~~Qi~talaYL---eSkrfVHRDIAaRNiLVsS 526 (974)
T KOG4257|consen 454 IKLIGVCVE-QPMWIVMELAPLGELREYLQQ---NKDSLPLRTLTLYCYQICTALAYL---ESKRFVHRDIAARNILVSS 526 (974)
T ss_pred hheeeeeec-cceeEEEecccchhHHHHHHh---ccccchHHHHHHHHHHHHHHHHHH---HhhchhhhhhhhhheeecC
Confidence 999999875 578999999999999999984 456789999999999999999999 7888999999999999999
Q ss_pred CCCEEEeccCCccccCCCCceeeEeeecccccccCCcccCCCCCCchhHHHHHHHHHHHHHh-CCCCccccCCCCccccH
Q 011360 348 DMEACISDLGLAMAIPDGYTRVLISYVLGTMAYIAPEYFQQPELSEKCDIFSFGMLLISLVR-GVPSFVFHQNGEEICSP 426 (487)
Q Consensus 348 ~~~~kl~DFg~s~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DvwslG~~l~ellt-g~~pf~~~~~~~~~~~~ 426 (487)
...+||+|||+++.+.+...... +...-++.|||||.+....++.+||||.||+++||++. |..||.+-.+...+..
T Consensus 527 p~CVKLaDFGLSR~~ed~~yYka-S~~kLPIKWmaPESINfRrFTtASDVWMFgVCmWEIl~lGvkPfqgvkNsDVI~~- 604 (974)
T KOG4257|consen 527 PQCVKLADFGLSRYLEDDAYYKA-SRGKLPIKWMAPESINFRRFTTASDVWMFGVCMWEILSLGVKPFQGVKNSDVIGH- 604 (974)
T ss_pred cceeeecccchhhhccccchhhc-cccccceeecCccccchhcccchhhHHHHHHHHHHHHHhcCCccccccccceEEE-
Confidence 99999999999999877654432 23445789999999999999999999999999999997 8999976655433211
Q ss_pred HHHHHHHhcCCCCCccCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCChHHHHHHHhhhC
Q 011360 427 EWLRKVMNSKNPSRAIDPRLPGNGYEKKMLHVLKIAYICTLHDPEERPNSQYVRCRLSQLL 487 (487)
Q Consensus 427 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~~il~~L~~ll 487 (487)
+-++.++ . +|..|. ..+..++.+||+.+|.+||++.+|.+.|.+++
T Consensus 605 -----iEnGeRl--P----~P~nCP----p~LYslmskcWayeP~kRPrftei~~~lsdv~ 650 (974)
T KOG4257|consen 605 -----IENGERL--P----CPPNCP----PALYSLMSKCWAYEPSKRPRFTEIKAILSDVL 650 (974)
T ss_pred -----ecCCCCC--C----CCCCCC----hHHHHHHHHHhccCcccCCcHHHHHHHHHHHH
Confidence 1112211 1 233322 34889999999999999999999999988763
No 121
>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=100.00 E-value=4.6e-39 Score=317.05 Aligned_cols=254 Identities=24% Similarity=0.356 Sum_probs=211.4
Q ss_pred ccccccccccccccceeEEEEEecCCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCC-CCCccc
Q 011360 191 EDCFASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQIR-HRNILP 269 (487)
Q Consensus 191 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-hpnIv~ 269 (487)
.+.|.+.+.||.|.||.||+++. ..+|+.+|+|.+.... .........+.+|+.+|+++. |||||.
T Consensus 34 ~~~Y~l~~~lG~G~Fg~v~~~~~-~~tg~~~A~K~i~k~~------------~~~~~~~~~v~~Ev~il~~l~~hpniv~ 100 (382)
T KOG0032|consen 34 KEKYELGRELGRGQFGVVYLCRE-KSTGKEVACKVIPKRK------------LRGKEDREDVRREVAILQQLSGHPNIVQ 100 (382)
T ss_pred cccEEehhhhCCCCceEEEEEEe-cCCCceeEEEEeehhh------------ccccccHHHHHHHHHHHHhccCCCCEEE
Confidence 34699999999999999999975 4679999999984311 111124567899999999997 999999
Q ss_pred cceEEecCCeeEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCC-
Q 011360 270 LLAHMVRPDCHLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVLLNDD- 348 (487)
Q Consensus 270 l~~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nill~~~- 348 (487)
+++++.+.+.+++|||+|.||.|.+.+... .+++..+..++.|++.++.|| |+.||+||||||+|+|+...
T Consensus 101 l~~~~e~~~~~~lvmEL~~GGeLfd~i~~~-----~~sE~da~~~~~~il~av~~l---H~~gvvHrDlKpEN~L~~~~~ 172 (382)
T KOG0032|consen 101 LKDAFEDPDSVYLVMELCEGGELFDRIVKK-----HYSERDAAGIIRQILEAVKYL---HSLGVVHRDLKPENLLLASKD 172 (382)
T ss_pred EEEEEEcCCeEEEEEEecCCchHHHHHHHc-----cCCHHHHHHHHHHHHHHHHHH---HhCCceeccCCHHHeeecccc
Confidence 999999999999999999999999999763 399999999999999999999 77899999999999999643
Q ss_pred ---CCEEEeccCCccccCCCCceeeEeeecccccccCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCccccCCCCcccc
Q 011360 349 ---MEACISDLGLAMAIPDGYTRVLISYVLGTMAYIAPEYFQQPELSEKCDIFSFGMLLISLVRGVPSFVFHQNGEEICS 425 (487)
Q Consensus 349 ---~~~kl~DFg~s~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DvwslG~~l~elltg~~pf~~~~~~~~~~~ 425 (487)
+.+|++|||++.....+ ......+||+.|+|||++....|+..+||||+|+++|.|++|.+||.+.+..
T Consensus 173 ~~~~~ik~~DFGla~~~~~~---~~~~~~~Gtp~y~APEvl~~~~y~~~~DiWS~Gvi~yiLL~G~~PF~~~~~~----- 244 (382)
T KOG0032|consen 173 EGSGRIKLIDFGLAKFIKPG---ERLHTIVGTPEYVAPEVLGGRPYGDEVDVWSIGVILYILLSGVPPFWGETEF----- 244 (382)
T ss_pred CCCCcEEEeeCCCceEccCC---ceEeeecCCccccCchhhcCCCCCcccchhHHHHHHHHHhhCCCCCcCCChh-----
Confidence 57999999999987662 2336788999999999999999999999999999999999999999554432
Q ss_pred HHHHHHHHhcCCCCCccCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCChHHHHH
Q 011360 426 PEWLRKVMNSKNPSRAIDPRLPGNGYEKKMLHVLKIAYICTLHDPEERPNSQYVRC 481 (487)
Q Consensus 426 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~~il~ 481 (487)
+....+..... .++.......+..+.+++..|+..||..|+|+.++++
T Consensus 245 -~~~~~i~~~~~-------~f~~~~w~~is~~akd~i~~ll~~dp~~R~ta~~~L~ 292 (382)
T KOG0032|consen 245 -EIFLAILRGDF-------DFTSEPWDDISESAKDFIRKLLEFDPRKRLTAAQALQ 292 (382)
T ss_pred -HHHHHHHcCCC-------CCCCCCccccCHHHHHHHHHhcccCcccCCCHHHHhc
Confidence 22223332222 2444555666778999999999999999999999886
No 122
>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3. Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r
Probab=100.00 E-value=1.3e-38 Score=306.74 Aligned_cols=257 Identities=20% Similarity=0.306 Sum_probs=198.0
Q ss_pred cccccccccccccceeEEEEEecCCCCc----eEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCCCCc
Q 011360 192 DCFASLEKIGSGGCGEVYKAELPGSNGK----MIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQIRHRNI 267 (487)
Q Consensus 192 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~----~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnI 267 (487)
++|.+.+.||.|+||.||+|.+. .++. .+++|.+.. .........+..|+..+..+.||||
T Consensus 7 ~~~~~~~~lg~G~~~~vy~~~~~-~~~~~~~~~~~~k~~~~--------------~~~~~~~~~~~~~~~~l~~l~h~~i 71 (279)
T cd05111 7 TELRKLKLLGSGVFGTVHKGIWI-PEGDSIKIPVAIKTIQD--------------RSGRQTFQEITDHMLAMGSLDHAYI 71 (279)
T ss_pred hhceeccccCccCCcceEEEEEc-CCCCceeeEEEEeeccc--------------ccchHHHHHHHHHHHHHhcCCCCCc
Confidence 45889999999999999999863 3343 467776521 1112234567778888999999999
Q ss_pred cccceEEecCCeeEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCC
Q 011360 268 LPLLAHMVRPDCHLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVLLND 347 (487)
Q Consensus 268 v~l~~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nill~~ 347 (487)
+++++++. ....++++||+++|+|.+++.. ....+++..+..++.|++.||.|| |++|++||||||+||+++.
T Consensus 72 v~~~~~~~-~~~~~~i~e~~~~gsL~~~l~~---~~~~~~~~~~~~i~~qi~~~l~~l---H~~~iiH~dlkp~nili~~ 144 (279)
T cd05111 72 VRLLGICP-GASLQLVTQLSPLGSLLDHVRQ---HRDSLDPQRLLNWCVQIAKGMYYL---EEHRMVHRNLAARNILLKS 144 (279)
T ss_pred ceEEEEEC-CCccEEEEEeCCCCcHHHHHHh---cccCCCHHHHHHHHHHHHHHHHHH---HHCCEeccccCcceEEEcC
Confidence 99999875 4557899999999999999864 245689999999999999999999 6788999999999999999
Q ss_pred CCCEEEeccCCccccCCCCceeeEeeecccccccCCcccCCCCCCchhHHHHHHHHHHHHHh-CCCCccccCCCCccccH
Q 011360 348 DMEACISDLGLAMAIPDGYTRVLISYVLGTMAYIAPEYFQQPELSEKCDIFSFGMLLISLVR-GVPSFVFHQNGEEICSP 426 (487)
Q Consensus 348 ~~~~kl~DFg~s~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DvwslG~~l~ellt-g~~pf~~~~~~~~~~~~ 426 (487)
++.+||+|||+++...............++..|+|||.+.+..++.++||||||+++||+++ |..||.....
T Consensus 145 ~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~------- 217 (279)
T cd05111 145 DSIVQIADFGVADLLYPDDKKYFYSEHKTPIKWMALESILFGRYTHQSDVWSYGVTVWEMMSYGAEPYAGMRP------- 217 (279)
T ss_pred CCcEEEcCCccceeccCCCcccccCCCCCcccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCCCCCH-------
Confidence 99999999999987644332222234457789999999998899999999999999999998 9999943321
Q ss_pred HHHHHHHhcCCCCCccCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCChHHHHHHHhhh
Q 011360 427 EWLRKVMNSKNPSRAIDPRLPGNGYEKKMLHVLKIAYICTLHDPEERPNSQYVRCRLSQL 486 (487)
Q Consensus 427 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~~il~~L~~l 486 (487)
.........+.... .+ .. ...++..++.+||..+|++|||+.++++.|..+
T Consensus 218 ~~~~~~~~~~~~~~--~~---~~----~~~~~~~li~~c~~~~p~~Rps~~el~~~l~~~ 268 (279)
T cd05111 218 HEVPDLLEKGERLA--QP---QI----CTIDVYMVMVKCWMIDENVRPTFKELANEFTRM 268 (279)
T ss_pred HHHHHHHHCCCcCC--CC---CC----CCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHH
Confidence 11222222221111 11 11 124578899999999999999999999988764
No 123
>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase. Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio
Probab=100.00 E-value=9.6e-39 Score=303.91 Aligned_cols=251 Identities=22% Similarity=0.310 Sum_probs=196.2
Q ss_pred ccccccceeEEEEEec-CCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCCCCccccceEEecC
Q 011360 199 KIGSGGCGEVYKAELP-GSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQIRHRNILPLLAHMVRP 277 (487)
Q Consensus 199 ~lg~G~~g~v~~~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~ 277 (487)
.||+|+||.||+|.+. ..++..+|+|++... .........+..|+.+++.+.||||+++++++. .
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~aiK~~~~~-------------~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-~ 67 (257)
T cd05116 2 ELGSGNFGTVKKGMYKMKKSEKTVAVKILKND-------------NNDPALKDELLREANVMQQLDNPYIVRMIGICE-A 67 (257)
T ss_pred cCCCcCCcceEEeEEecCCCceEEEEEEccCC-------------CCcHHHHHHHHHHHHHHHhCCCCCcceEEEEEc-C
Confidence 6899999999999753 346788999987321 112234567888999999999999999999875 4
Q ss_pred CeeEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCCEEEeccC
Q 011360 278 DCHLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVLLNDDMEACISDLG 357 (487)
Q Consensus 278 ~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nill~~~~~~kl~DFg 357 (487)
+..++||||+++|+|.+++.. ...+++..+..++.|++.||.|| |++|++||||||.||+++.++.+||+|||
T Consensus 68 ~~~~lv~e~~~~~~L~~~l~~----~~~~~~~~~~~i~~qi~~al~~l---H~~~i~H~dlkp~nill~~~~~~kl~Dfg 140 (257)
T cd05116 68 ESWMLVMELAELGPLNKFLQK----NKHVTEKNITELVHQVSMGMKYL---EETNFVHRDLAARNVLLVTQHYAKISDFG 140 (257)
T ss_pred CCcEEEEecCCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHH---HHCCEeecccchhhEEEcCCCeEEECCCc
Confidence 567899999999999999864 35688999999999999999999 77889999999999999999999999999
Q ss_pred CccccCCCCceeeE-eeecccccccCCcccCCCCCCchhHHHHHHHHHHHHHh-CCCCccccCCCCccccHHHHHHHHhc
Q 011360 358 LAMAIPDGYTRVLI-SYVLGTMAYIAPEYFQQPELSEKCDIFSFGMLLISLVR-GVPSFVFHQNGEEICSPEWLRKVMNS 435 (487)
Q Consensus 358 ~s~~~~~~~~~~~~-~~~~gt~~y~aPE~l~~~~~~~~~DvwslG~~l~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~ 435 (487)
++............ ....++..|+|||.+....++.++|+||||+++|||++ |..||..... .+....+...
T Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~------~~~~~~i~~~ 214 (257)
T cd05116 141 LSKALGADENYYKAKTHGKWPVKWYAPECMNYYKFSSKSDVWSFGVLMWEAFSYGQKPYKGMKG------NEVTQMIESG 214 (257)
T ss_pred cccccCCCCCeeeecCCCCCCccccCHhHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCH------HHHHHHHHCC
Confidence 99876543322111 12234578999999988889999999999999999998 9999943221 2222322222
Q ss_pred CCCCCccCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCChHHHHHHHhhh
Q 011360 436 KNPSRAIDPRLPGNGYEKKMLHVLKIAYICTLHDPEERPNSQYVRCRLSQL 486 (487)
Q Consensus 436 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~~il~~L~~l 486 (487)
..+ ..+.. .+.++.+++.+||+.||++|||+.+|...|+++
T Consensus 215 ~~~------~~~~~----~~~~l~~li~~~~~~~p~~Rp~~~~i~~~l~~~ 255 (257)
T cd05116 215 ERM------ECPQR----CPPEMYDLMKLCWTYGVDERPGFAVVELRLRNY 255 (257)
T ss_pred CCC------CCCCC----CCHHHHHHHHHHhccCchhCcCHHHHHHHHhcc
Confidence 111 12221 224688999999999999999999999999864
No 124
>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,
Probab=100.00 E-value=2.9e-39 Score=312.32 Aligned_cols=254 Identities=27% Similarity=0.353 Sum_probs=199.1
Q ss_pred cccccccccccceeEEEEEecCCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCCCCccccceE
Q 011360 194 FASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQIRHRNILPLLAH 273 (487)
Q Consensus 194 ~~~~~~lg~G~~g~v~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~ 273 (487)
|++.+.||+|+||.||++.. ..++..||+|++.. ...........+.+|+.+++.++||||++++++
T Consensus 2 y~~~~~lg~G~~g~V~~~~~-~~~~~~vavK~~~~------------~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~ 68 (285)
T cd05605 2 FRHYRVLGKGGFGEVCACQV-RATGKMYACKKLEK------------KRIKKRKGEAMALNEKQILEKVNSRFVVSLAYA 68 (285)
T ss_pred ceEEEEEecCCCeEEEEEEE-cCCCceEEEEEEeh------------hhhhhhhhHHHHHHHHHHHHhcCCCCEeeeeee
Confidence 78889999999999999974 45789999998732 011112234556789999999999999999999
Q ss_pred EecCCeeEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCCEEE
Q 011360 274 MVRPDCHLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVLLNDDMEACI 353 (487)
Q Consensus 274 ~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nill~~~~~~kl 353 (487)
+..++..++||||+++|+|.+++.. .....+++..+..++.|++.||.|| |+.|++||||||+||++++++.++|
T Consensus 69 ~~~~~~~~lv~e~~~~~~L~~~~~~--~~~~~~~~~~~~~~~~qi~~~l~~l---H~~~ivH~dlkp~Nil~~~~~~~~l 143 (285)
T cd05605 69 YETKDALCLVLTLMNGGDLKFHIYN--MGNPGFDEERAVFYAAEITCGLEDL---HRERIVYRDLKPENILLDDYGHIRI 143 (285)
T ss_pred ecCCCeEEEEEeccCCCcHHHHHHh--cCcCCCCHHHHHHHHHHHHHHHHHH---HHCCcEecCCCHHHEEECCCCCEEE
Confidence 9999999999999999999988864 2345689999999999999999999 6778999999999999999999999
Q ss_pred eccCCccccCCCCceeeEeeecccccccCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCccccCCCCccccHHHHHHHH
Q 011360 354 SDLGLAMAIPDGYTRVLISYVLGTMAYIAPEYFQQPELSEKCDIFSFGMLLISLVRGVPSFVFHQNGEEICSPEWLRKVM 433 (487)
Q Consensus 354 ~DFg~s~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DvwslG~~l~elltg~~pf~~~~~~~~~~~~~~~~~~~ 433 (487)
+|||++......... ....|++.|+|||++.+..++.++||||||+++|+|++|..||....... ..+......
T Consensus 144 ~Dfg~~~~~~~~~~~---~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~el~~g~~pf~~~~~~~---~~~~~~~~~ 217 (285)
T cd05605 144 SDLGLAVEIPEGETI---RGRVGTVGYMAPEVVKNERYTFSPDWWGLGCLIYEMIEGKSPFRQRKEKV---KREEVERRV 217 (285)
T ss_pred eeCCCceecCCCCcc---ccccCCCCccCcHHhcCCCCCccccchhHHHHHHHHHHCCCCCCCCchhh---HHHHHHHHh
Confidence 999998765433221 23468999999999998889999999999999999999999995432211 111111111
Q ss_pred hcCCCCCccCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCC-----ChHHHHH
Q 011360 434 NSKNPSRAIDPRLPGNGYEKKMLHVLKIAYICTLHDPEERP-----NSQYVRC 481 (487)
Q Consensus 434 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RP-----s~~~il~ 481 (487)
.... .. . ....+..+.+++.+||+.||++|| ++.+++.
T Consensus 218 ~~~~--~~----~----~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~ 260 (285)
T cd05605 218 KEDQ--EE----Y----SEKFSEAARSICRQLLTKDPGFRLGCRGEGAEEVKA 260 (285)
T ss_pred hhcc--cc----c----CcccCHHHHHHHHHHccCCHHHhcCCCCCCHHHHhc
Confidence 1111 11 1 112345688999999999999999 7878754
No 125
>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an
Probab=100.00 E-value=1.7e-39 Score=327.14 Aligned_cols=255 Identities=22% Similarity=0.342 Sum_probs=194.5
Q ss_pred ccccccccccccceeEEEEEecCCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCCCCccccce
Q 011360 193 CFASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQIRHRNILPLLA 272 (487)
Q Consensus 193 ~~~~~~~lg~G~~g~v~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~ 272 (487)
.|.+++.||+|+||.||+|.. ..+++.||+|++.. ...........+.+|+.++++++||||+++++
T Consensus 2 ~f~~~~~LG~G~~g~Vy~a~~-~~~~~~~aiK~i~~------------~~~~~~~~~~~~~~E~~il~~~~h~~iv~~~~ 68 (382)
T cd05625 2 MFVKIKTLGIGAFGEVCLARK-VDTKALYAMKTLRK------------KDVLLRNQVAHVKAERDILAEADNEWVVRLYY 68 (382)
T ss_pred CcEEEEEEEeCCCEEEEEEEE-CCCCCEEEEEEEeH------------HHhhhHHHHHHHHHHHHHHHhCCCCcCCeEEE
Confidence 488999999999999999974 46789999998732 11122344567889999999999999999999
Q ss_pred EEecCCeeEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCCEE
Q 011360 273 HMVRPDCHLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVLLNDDMEAC 352 (487)
Q Consensus 273 ~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nill~~~~~~k 352 (487)
.+.+.+.+|+|||||++|+|.+++.. ...+++..+..++.|++.||.|| |++||+||||||+|||++.++.+|
T Consensus 69 ~~~~~~~~~lv~E~~~gg~L~~~l~~----~~~~~e~~~~~~~~qi~~al~~l---H~~~ivHrDlKp~NILl~~~g~~k 141 (382)
T cd05625 69 SFQDKDNLYFVMDYIPGGDMMSLLIR----MGIFPEDLARFYIAELTCAVESV---HKMGFIHRDIKPDNILIDRDGHIK 141 (382)
T ss_pred EEEeCCEEEEEEeCCCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHH---HhCCeecCCCCHHHEEECCCCCEE
Confidence 99999999999999999999999864 35688899999999999999999 778899999999999999999999
Q ss_pred EeccCCccccCCCC---------------------------------------------ceeeEeeecccccccCCcccC
Q 011360 353 ISDLGLAMAIPDGY---------------------------------------------TRVLISYVLGTMAYIAPEYFQ 387 (487)
Q Consensus 353 l~DFg~s~~~~~~~---------------------------------------------~~~~~~~~~gt~~y~aPE~l~ 387 (487)
|+|||++....... .........||+.|+|||++.
T Consensus 142 L~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~ 221 (382)
T cd05625 142 LTDFGLCTGFRWTHDSKYYQSGDHVRQDSMDFSNEWGDPANCRCGDRLKPLERRAARQHQRCLAHSLVGTPNYIAPEVLL 221 (382)
T ss_pred EeECCCCccccccccccccccccccccccccccccccccccccccccccchhhhhccccccccccccccCcccCCHHHhc
Confidence 99999975321000 000012346899999999999
Q ss_pred CCCCCchhHHHHHHHHHHHHHhCCCCccccCCCCccccHHHHHHHHhcCCCCCccCCCCCCCCcHHHHHHHHHHHhhccC
Q 011360 388 QPELSEKCDIFSFGMLLISLVRGVPSFVFHQNGEEICSPEWLRKVMNSKNPSRAIDPRLPGNGYEKKMLHVLKIAYICTL 467 (487)
Q Consensus 388 ~~~~~~~~DvwslG~~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~ 467 (487)
+..++.++|||||||++|||++|.+||..... .+........... .. .+. ....+.++.+++.+|+
T Consensus 222 ~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~------~~~~~~i~~~~~~-~~----~p~--~~~~s~~~~~li~~l~- 287 (382)
T cd05625 222 RTGYTQLCDWWSVGVILYEMLVGQPPFLAQTP------LETQMKVINWQTS-LH----IPP--QAKLSPEASDLIIKLC- 287 (382)
T ss_pred CCCCCCeeeEEechHHHHHHHhCCCCCCCCCH------HHHHHHHHccCCC-cC----CCC--cccCCHHHHHHHHHHc-
Confidence 98999999999999999999999999954322 1222222221111 11 111 1112345667776665
Q ss_pred CCCCCCCC---hHHHHH
Q 011360 468 HDPEERPN---SQYVRC 481 (487)
Q Consensus 468 ~~P~~RPs---~~~il~ 481 (487)
.+|.+|++ +.+++.
T Consensus 288 ~~p~~R~~~~~~~ei~~ 304 (382)
T cd05625 288 RGPEDRLGKNGADEIKA 304 (382)
T ss_pred cCHhHcCCCCCHHHHhc
Confidence 59999997 777653
No 126
>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp
Probab=100.00 E-value=3.4e-39 Score=316.41 Aligned_cols=244 Identities=25% Similarity=0.342 Sum_probs=188.7
Q ss_pred cccccccceeEEEEEecCCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhcc-CCCCCccccceEEec
Q 011360 198 EKIGSGGCGEVYKAELPGSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQ-IRHRNILPLLAHMVR 276 (487)
Q Consensus 198 ~~lg~G~~g~v~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~-l~hpnIv~l~~~~~~ 276 (487)
+.||.|+||.||+|... .+++.||+|.+... .............|..++.. .+||||+++++++..
T Consensus 1 ~~lG~G~~g~Vy~~~~~-~~~~~vaiK~~~~~------------~~~~~~~~~~~~~e~~~l~~~~~hp~i~~~~~~~~~ 67 (316)
T cd05592 1 KVLGKGSFGKVMLAELK-GTNEFFAIKALKKD------------VVLEDDDVECTMVERRVLALAWEHPFLTHLFCTFQT 67 (316)
T ss_pred CeeeeCCCeEEEEEEEC-CCCCEEEEEEEEHH------------HhhhhhhHHHHHHHHHHHHhccCCCCccceeeEEEc
Confidence 36899999999999754 57889999988421 11112233444556666554 489999999999999
Q ss_pred CCeeEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCCEEEecc
Q 011360 277 PDCHLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVLLNDDMEACISDL 356 (487)
Q Consensus 277 ~~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nill~~~~~~kl~DF 356 (487)
.+..|+||||++||+|.+++.. ...+++..+..++.|++.||.|| |++||+||||||+||+++.++.+||+||
T Consensus 68 ~~~~~lv~e~~~gg~L~~~~~~----~~~~~~~~~~~~~~qi~~al~~L---H~~~ivH~dlkp~Nill~~~~~~kL~Df 140 (316)
T cd05592 68 KEHLFFVMEYLNGGDLMFHIQS----SGRFDEARARFYAAEIICGLQFL---HKKGIIYRDLKLDNVLLDKDGHIKIADF 140 (316)
T ss_pred CCEEEEEEcCCCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHH---HHCCEEeCCCCHHHeEECCCCCEEEccC
Confidence 9999999999999999998864 35689999999999999999999 6788999999999999999999999999
Q ss_pred CCccccCCCCceeeEeeecccccccCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCccccCCCCccccHHHHHHHHhcC
Q 011360 357 GLAMAIPDGYTRVLISYVLGTMAYIAPEYFQQPELSEKCDIFSFGMLLISLVRGVPSFVFHQNGEEICSPEWLRKVMNSK 436 (487)
Q Consensus 357 g~s~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DvwslG~~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~ 436 (487)
|++........ ......||+.|+|||++.+..++.++|||||||++|+|++|..||..... .+....+. ..
T Consensus 141 g~a~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~G~~Pf~~~~~------~~~~~~i~-~~ 211 (316)
T cd05592 141 GMCKENMNGEG--KASTFCGTPDYIAPEILKGQKYNESVDWWSFGVLLYEMLIGQSPFHGEDE------DELFDSIL-ND 211 (316)
T ss_pred cCCeECCCCCC--ccccccCCccccCHHHHcCCCCCCcccchhHHHHHHHHHhCCCCCCCCCH------HHHHHHHH-cC
Confidence 99976433221 12345689999999999988999999999999999999999999954321 12222222 11
Q ss_pred CCCCccCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCChH-HHH
Q 011360 437 NPSRAIDPRLPGNGYEKKMLHVLKIAYICTLHDPEERPNSQ-YVR 480 (487)
Q Consensus 437 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~-~il 480 (487)
.+ .++.. ...++.+++.+||+.+|++||++. +++
T Consensus 212 ~~--~~~~~--------~~~~~~~ll~~~l~~~P~~R~~~~~~l~ 246 (316)
T cd05592 212 RP--HFPRW--------ISKEAKDCLSKLFERDPTKRLGVDGDIR 246 (316)
T ss_pred CC--CCCCC--------CCHHHHHHHHHHccCCHHHcCCChHHHH
Confidence 11 11111 234578999999999999999875 443
No 127
>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C. Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re
Probab=100.00 E-value=7e-39 Score=314.55 Aligned_cols=245 Identities=24% Similarity=0.327 Sum_probs=193.2
Q ss_pred cccccccceeEEEEEecCCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccC-CCCCccccceEEec
Q 011360 198 EKIGSGGCGEVYKAELPGSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQI-RHRNILPLLAHMVR 276 (487)
Q Consensus 198 ~~lg~G~~g~v~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpnIv~l~~~~~~ 276 (487)
+.||.|+||.||++.. ..++..||+|++.. ...........+..|..++..+ +||||+++++++..
T Consensus 1 ~~lG~G~~g~V~~~~~-~~~~~~~aiK~~~~------------~~~~~~~~~~~~~~e~~il~~~~~h~~i~~~~~~~~~ 67 (318)
T cd05570 1 KVLGKGSFGKVLLAEL-KGTDELYAVKVLKK------------DVILQDDDVECTMTEKRVLALAGKHPFLTQLHSCFQT 67 (318)
T ss_pred CeeeeCCCeEEEEEEE-CCCCCEEEEEEEEH------------HHHhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEc
Confidence 4689999999999975 45788999998842 1111223445667788888777 79999999999999
Q ss_pred CCeeEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCCEEEecc
Q 011360 277 PDCHLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVLLNDDMEACISDL 356 (487)
Q Consensus 277 ~~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nill~~~~~~kl~DF 356 (487)
.+.+|+||||+++|+|.+++.. ...+++..+..++.|++.||.|| |+.||+||||||+||+++.++.+||+||
T Consensus 68 ~~~~~lv~e~~~~~~L~~~~~~----~~~l~~~~~~~~~~qi~~~l~~L---H~~~ivH~dlkp~Nill~~~~~~kl~Df 140 (318)
T cd05570 68 KDRLFFVMEYVNGGDLMFHIQR----SGRFDEPRARFYAAEIVLGLQFL---HERGIIYRDLKLDNVLLDSEGHIKIADF 140 (318)
T ss_pred CCEEEEEEcCCCCCCHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHH---HhCCeEccCCCHHHeEECCCCcEEeccc
Confidence 9999999999999999988864 45689999999999999999999 7889999999999999999999999999
Q ss_pred CCccccCCCCceeeEeeecccccccCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCccccCCCCccccHHHHHHHHhcC
Q 011360 357 GLAMAIPDGYTRVLISYVLGTMAYIAPEYFQQPELSEKCDIFSFGMLLISLVRGVPSFVFHQNGEEICSPEWLRKVMNSK 436 (487)
Q Consensus 357 g~s~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DvwslG~~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~ 436 (487)
|++......... .....||+.|+|||++.+..++.++|||||||++|+|++|..||.... ......... ..
T Consensus 141 g~~~~~~~~~~~--~~~~~g~~~y~aPE~~~~~~~~~~~DiwslGvil~~l~~G~~pf~~~~------~~~~~~~i~-~~ 211 (318)
T cd05570 141 GMCKEGILGGVT--TSTFCGTPDYIAPEILSYQPYGPAVDWWALGVLLYEMLAGQSPFEGDD------EDELFQSIL-ED 211 (318)
T ss_pred CCCeecCcCCCc--ccceecCccccCHHHhcCCCCCcchhhhhHHHHHHHHhhCCCCCCCCC------HHHHHHHHH-cC
Confidence 998653222111 134568999999999999999999999999999999999999994332 112222222 21
Q ss_pred CCCCccCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCCh-----HHHHH
Q 011360 437 NPSRAIDPRLPGNGYEKKMLHVLKIAYICTLHDPEERPNS-----QYVRC 481 (487)
Q Consensus 437 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~-----~~il~ 481 (487)
.+ .++.. .+..+.+++.+||+.||++|||+ .++++
T Consensus 212 ~~--~~~~~--------~~~~~~~li~~~l~~dP~~R~s~~~~~~~~ll~ 251 (318)
T cd05570 212 EV--RYPRW--------LSKEAKSILKSFLTKNPEKRLGCLPTGEQDIKG 251 (318)
T ss_pred CC--CCCCc--------CCHHHHHHHHHHccCCHHHcCCCCCCCHHHHhc
Confidence 11 11111 23568899999999999999999 77754
No 128
>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in
Probab=100.00 E-value=6.2e-39 Score=314.54 Aligned_cols=244 Identities=26% Similarity=0.367 Sum_probs=189.7
Q ss_pred cccccccceeEEEEEecCCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhcc-CCCCCccccceEEec
Q 011360 198 EKIGSGGCGEVYKAELPGSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQ-IRHRNILPLLAHMVR 276 (487)
Q Consensus 198 ~~lg~G~~g~v~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~-l~hpnIv~l~~~~~~ 276 (487)
+.||.|+||.||+|.. ..++..||+|.+... .............|..++.. +.||||+++++++.+
T Consensus 1 ~~lG~G~~g~Vy~~~~-~~~~~~vaiK~~~~~------------~~~~~~~~~~~~~e~~~l~~~~~hp~iv~~~~~~~~ 67 (316)
T cd05619 1 KMLGKGSFGKVFLAEL-KGTNQFFAIKALKKD------------VVLMDDDVECTMVEKRVLSLAWEHPFLTHLYCTFQT 67 (316)
T ss_pred CeeeeCCCEEEEEEEE-CCCCCEEEEEEEEHH------------HhhhcchHHHHHHHHHHHHhccCCCcCcceEEEEEe
Confidence 3689999999999975 457889999988421 00112233445566677765 499999999999999
Q ss_pred CCeeEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCCEEEecc
Q 011360 277 PDCHLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVLLNDDMEACISDL 356 (487)
Q Consensus 277 ~~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nill~~~~~~kl~DF 356 (487)
.+.+|+||||+++|+|.+++.. ...+++..+..++.|++.||.|| |++||+||||||+|||++.++.+||+||
T Consensus 68 ~~~~~lv~ey~~~g~L~~~l~~----~~~~~~~~~~~~~~qi~~al~~L---H~~~ivHrdikp~Nil~~~~~~~kl~Df 140 (316)
T cd05619 68 KENLFFVMEYLNGGDLMFHIQS----CHKFDLPRATFYAAEIICGLQFL---HSKGIVYRDLKLDNILLDTDGHIKIADF 140 (316)
T ss_pred CCEEEEEEeCCCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHH---HhCCeEeCCCCHHHEEECCCCCEEEccC
Confidence 9999999999999999999864 35688999999999999999999 7788999999999999999999999999
Q ss_pred CCccccCCCCceeeEeeecccccccCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCccccCCCCccccHHHHHHHHhcC
Q 011360 357 GLAMAIPDGYTRVLISYVLGTMAYIAPEYFQQPELSEKCDIFSFGMLLISLVRGVPSFVFHQNGEEICSPEWLRKVMNSK 436 (487)
Q Consensus 357 g~s~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DvwslG~~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~ 436 (487)
|++........ ......||+.|+|||++.+..++.++|||||||++|+|++|..||..... .+..... ...
T Consensus 141 g~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~------~~~~~~i-~~~ 211 (316)
T cd05619 141 GMCKENMLGDA--KTCTFCGTPDYIAPEILLGQKYNTSVDWWSFGVLLYEMLIGQSPFHGHDE------EELFQSI-RMD 211 (316)
T ss_pred CcceECCCCCC--ceeeecCCccccCHHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCCCH------HHHHHHH-HhC
Confidence 99875322211 12345689999999999998999999999999999999999999954321 1222222 211
Q ss_pred CCCCccCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCChH-HHH
Q 011360 437 NPSRAIDPRLPGNGYEKKMLHVLKIAYICTLHDPEERPNSQ-YVR 480 (487)
Q Consensus 437 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~-~il 480 (487)
.+ .++.. ...++.+++.+||+.+|++||++. +++
T Consensus 212 ~~--~~~~~--------~~~~~~~li~~~l~~~P~~R~~~~~~l~ 246 (316)
T cd05619 212 NP--CYPRW--------LTREAKDILVKLFVREPERRLGVKGDIR 246 (316)
T ss_pred CC--CCCcc--------CCHHHHHHHHHHhccCHhhcCCChHHHH
Confidence 11 11111 224588999999999999999997 554
No 129
>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src. Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo
Probab=100.00 E-value=6.4e-39 Score=306.07 Aligned_cols=256 Identities=25% Similarity=0.357 Sum_probs=199.8
Q ss_pred ccccccccccccccceeEEEEEecCCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCCCCcccc
Q 011360 191 EDCFASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQIRHRNILPL 270 (487)
Q Consensus 191 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l 270 (487)
.++|.+.+.||.|+||.||+|.+. ++..||+|++.. .......+.+|+.+++.++||||+++
T Consensus 5 ~~~~~~~~~lg~g~~~~v~~~~~~--~~~~valK~~~~----------------~~~~~~~~~~E~~~l~~l~~~~i~~~ 66 (262)
T cd05071 5 RESLRLEVKLGQGCFGEVWMGTWN--GTTRVAIKTLKP----------------GTMSPEAFLQEAQVMKKLRHEKLVQL 66 (262)
T ss_pred hHHeeEeeecCCCCCCcEEEEEec--CCceEEEEeccc----------------CccCHHHHHHHHHHHHhCCCCCcceE
Confidence 346999999999999999999764 335699998732 01112457889999999999999999
Q ss_pred ceEEecCCeeEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCC
Q 011360 271 LAHMVRPDCHLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVLLNDDME 350 (487)
Q Consensus 271 ~~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nill~~~~~ 350 (487)
++.+. .+..++||||+++|+|.+++.. .....+++..+..++.|++.||.|| |+.|++||||+|+||+++.++.
T Consensus 67 ~~~~~-~~~~~lv~e~~~~~~L~~~~~~--~~~~~~~~~~~~~~~~~l~~aL~~l---H~~~i~H~dl~p~Nill~~~~~ 140 (262)
T cd05071 67 YAVVS-EEPIYIVTEYMSKGSLLDFLKG--EMGKYLRLPQLVDMAAQIASGMAYV---ERMNYVHRDLRAANILVGENLV 140 (262)
T ss_pred EEEEC-CCCcEEEEEcCCCCcHHHHHhh--ccccCCCHHHHHHHHHHHHHHHHHH---HHCCccccccCcccEEEcCCCc
Confidence 99774 4567999999999999999974 2345678999999999999999999 7788999999999999999999
Q ss_pred EEEeccCCccccCCCCceeeEeeecccccccCCcccCCCCCCchhHHHHHHHHHHHHHh-CCCCccccCCCCccccHHHH
Q 011360 351 ACISDLGLAMAIPDGYTRVLISYVLGTMAYIAPEYFQQPELSEKCDIFSFGMLLISLVR-GVPSFVFHQNGEEICSPEWL 429 (487)
Q Consensus 351 ~kl~DFg~s~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DvwslG~~l~ellt-g~~pf~~~~~~~~~~~~~~~ 429 (487)
++|+|||.+.......... .....++..|+|||+..+..++.++||||||+++|+|+| |..||..... .+..
T Consensus 141 ~~L~dfg~~~~~~~~~~~~-~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~ellt~g~~p~~~~~~------~~~~ 213 (262)
T cd05071 141 CKVADFGLARLIEDNEYTA-RQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVN------REVL 213 (262)
T ss_pred EEeccCCceeecccccccc-ccCCcccceecCHhHhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCh------HHHH
Confidence 9999999997664432211 122346778999999988889999999999999999999 7888843321 1222
Q ss_pred HHHHhcCCCCCccCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCChHHHHHHHhhhC
Q 011360 430 RKVMNSKNPSRAIDPRLPGNGYEKKMLHVLKIAYICTLHDPEERPNSQYVRCRLSQLL 487 (487)
Q Consensus 430 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~~il~~L~~ll 487 (487)
......... . . ....+..+.+++.+||+.+|++|||+.++++.|+..+
T Consensus 214 ~~~~~~~~~--~----~----~~~~~~~l~~li~~~l~~~p~~Rp~~~~~~~~l~~~~ 261 (262)
T cd05071 214 DQVERGYRM--P----C----PPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYF 261 (262)
T ss_pred HHHhcCCCC--C----C----ccccCHHHHHHHHHHccCCcccCCCHHHHHHHHHHhc
Confidence 222211111 0 1 1123456889999999999999999999999998753
No 130
>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.
Probab=100.00 E-value=1.1e-39 Score=327.90 Aligned_cols=255 Identities=22% Similarity=0.337 Sum_probs=195.4
Q ss_pred ccccccccccccceeEEEEEecCCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCCCCccccce
Q 011360 193 CFASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQIRHRNILPLLA 272 (487)
Q Consensus 193 ~~~~~~~lg~G~~g~v~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~ 272 (487)
.|.+++.||.|+||.||+++. ..+++.||+|++.. ...........+.+|+.++..++||||+++++
T Consensus 2 ~y~~~~~lG~G~~g~V~~a~~-~~~~~~~avK~~~~------------~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~ 68 (376)
T cd05598 2 MFVKIKTIGIGAFGEVCLVRK-VDTNALYAMKTLRK------------ADVLMRNQAAHVKAERDILAEADNEWVVKLYY 68 (376)
T ss_pred CceEEEEEEeCCCeEEEEEEE-CCCCCEEEEEEEcH------------HHHHhhhhHHHHHHHHHHHHhCCCCCcceEEE
Confidence 589999999999999999975 45789999998732 11122234566788999999999999999999
Q ss_pred EEecCCeeEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCCEE
Q 011360 273 HMVRPDCHLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVLLNDDMEAC 352 (487)
Q Consensus 273 ~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nill~~~~~~k 352 (487)
.+.+++.+|+|||||++|+|.+++.. ...+++..+..++.||+.||+|| |++||+||||||+|||++.++.+|
T Consensus 69 ~~~~~~~~~lv~E~~~~g~L~~~i~~----~~~~~~~~~~~~~~qi~~al~~l---H~~~ivHrDlkp~Nill~~~~~ik 141 (376)
T cd05598 69 SFQDKDNLYFVMDYIPGGDMMSLLIR----LGIFEEDLARFYIAELTCAIESV---HKMGFIHRDIKPDNILIDRDGHIK 141 (376)
T ss_pred EEEcCCEEEEEEeCCCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHH---HHCCeEeCCCCHHHEEECCCCCEE
Confidence 99999999999999999999999865 45688889999999999999999 778899999999999999999999
Q ss_pred EeccCCccccCCCC-----------------------------------------ceeeEeeecccccccCCcccCCCCC
Q 011360 353 ISDLGLAMAIPDGY-----------------------------------------TRVLISYVLGTMAYIAPEYFQQPEL 391 (487)
Q Consensus 353 l~DFg~s~~~~~~~-----------------------------------------~~~~~~~~~gt~~y~aPE~l~~~~~ 391 (487)
|+|||++..+.... .........||+.|+|||++.+..+
T Consensus 142 L~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~ 221 (376)
T cd05598 142 LTDFGLCTGFRWTHDSKYYQKGDHHRQDSMEPSEEWSEIDRCRLKPLERRRKRQHQRCLAHSLVGTPNYIAPEVLLRTGY 221 (376)
T ss_pred EEeCCCCccccccccccccccccccccccccccccccccccccccchhhhhhhhcccccccccCCCccccCHHHHcCCCC
Confidence 99999975321000 0000113469999999999999999
Q ss_pred CchhHHHHHHHHHHHHHhCCCCccccCCCCccccHHHHHHHHhcCCCCCccCCCCCCCCcHHHHHHHHHHHhhccCCCCC
Q 011360 392 SEKCDIFSFGMLLISLVRGVPSFVFHQNGEEICSPEWLRKVMNSKNPSRAIDPRLPGNGYEKKMLHVLKIAYICTLHDPE 471 (487)
Q Consensus 392 ~~~~DvwslG~~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~ 471 (487)
+.++|||||||++|||++|..||..... .+....+.... .... ++. ....+..+.+++.+|+ .+|.
T Consensus 222 ~~~~DiwSlGvilyell~G~~Pf~~~~~------~~~~~~i~~~~-~~~~----~~~--~~~~s~~~~~li~~l~-~~p~ 287 (376)
T cd05598 222 TQLCDWWSVGVILYEMLVGQPPFLADTP------AETQLKVINWE-TTLH----IPS--QAKLSREASDLILRLC-CGAE 287 (376)
T ss_pred CcceeeeeccceeeehhhCCCCCCCCCH------HHHHHHHhccC-cccc----CCC--CCCCCHHHHHHHHHHh-cCHh
Confidence 9999999999999999999999954322 12222222111 1101 111 1112345667777766 4999
Q ss_pred CCC---ChHHHHH
Q 011360 472 ERP---NSQYVRC 481 (487)
Q Consensus 472 ~RP---s~~~il~ 481 (487)
+|| |+.++++
T Consensus 288 ~R~~~~t~~ell~ 300 (376)
T cd05598 288 DRLGKNGADEIKA 300 (376)
T ss_pred hcCCCCCHHHHhC
Confidence 999 8888764
No 131
>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory
Probab=100.00 E-value=8e-39 Score=308.47 Aligned_cols=259 Identities=21% Similarity=0.330 Sum_probs=202.2
Q ss_pred ccccccccccccceeEEEEEe----cCCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCCCCcc
Q 011360 193 CFASLEKIGSGGCGEVYKAEL----PGSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQIRHRNIL 268 (487)
Q Consensus 193 ~~~~~~~lg~G~~g~v~~~~~----~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv 268 (487)
++.+...||.|+||.||++.. ...++..+|+|.+.. ........+.+|+.+++.++||||+
T Consensus 6 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~---------------~~~~~~~~~~~e~~~l~~l~h~~i~ 70 (280)
T cd05092 6 DIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKE---------------ASESARQDFQREAELLTVLQHQHIV 70 (280)
T ss_pred hceeccccCCccCCeEEEeEEecCCCCCCceEEEEEecCc---------------CCHHHHHHHHHHHHHHhcCCCCCCc
Confidence 588899999999999999964 233567889997632 2233456788899999999999999
Q ss_pred ccceEEecCCeeEEEEEecCCCCHHHHHhhhhc-----------CCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecC
Q 011360 269 PLLAHMVRPDCHLLVYEFMKNGSLQDILDDVSR-----------GRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGD 337 (487)
Q Consensus 269 ~l~~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~-----------~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~D 337 (487)
++++++...+..+++|||+++++|.+++..... ....+++..+..++.|++.||+|| |+.|++|||
T Consensus 71 ~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~L---H~~~i~H~d 147 (280)
T cd05092 71 RFYGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYL---ASLHFVHRD 147 (280)
T ss_pred eEEEEEecCCceEEEEecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHH---HHCCeeccc
Confidence 999999999999999999999999999875321 113578899999999999999999 678899999
Q ss_pred CCCCCEEeCCCCCEEEeccCCccccCCCCceeeEeeecccccccCCcccCCCCCCchhHHHHHHHHHHHHHh-CCCCccc
Q 011360 338 IKPRNVLLNDDMEACISDLGLAMAIPDGYTRVLISYVLGTMAYIAPEYFQQPELSEKCDIFSFGMLLISLVR-GVPSFVF 416 (487)
Q Consensus 338 lkp~Nill~~~~~~kl~DFg~s~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DvwslG~~l~ellt-g~~pf~~ 416 (487)
|||+||++++++.+||+|||++................+++.|+|||.+.+..++.++|||||||++|+|++ |.+||..
T Consensus 148 lkp~nil~~~~~~~kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~ 227 (280)
T cd05092 148 LATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDIWSFGVVLWEIFTYGKQPWYQ 227 (280)
T ss_pred ccHhhEEEcCCCCEEECCCCceeEcCCCceeecCCCccccccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCcc
Confidence 999999999999999999999876543322222223345788999999998899999999999999999998 8999833
Q ss_pred cCCCCccccHHHHHHHHhcCCCCCccCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCChHHHHHHHhh
Q 011360 417 HQNGEEICSPEWLRKVMNSKNPSRAIDPRLPGNGYEKKMLHVLKIAYICTLHDPEERPNSQYVRCRLSQ 485 (487)
Q Consensus 417 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~~il~~L~~ 485 (487)
.. ..+..........+ . .+.. .+..+.+++.+||+.+|++||++.+|++.|+.
T Consensus 228 ~~------~~~~~~~~~~~~~~-~-~~~~--------~~~~~~~li~~cl~~~P~~Rp~~~~l~~~l~~ 280 (280)
T cd05092 228 LS------NTEAIECITQGREL-E-RPRT--------CPPEVYAIMQGCWQREPQQRMVIKDIHSRLQA 280 (280)
T ss_pred CC------HHHHHHHHHcCccC-C-CCCC--------CCHHHHHHHHHHccCChhhCCCHHHHHHHHhC
Confidence 22 12222222222111 1 1111 22458899999999999999999999998863
No 132
>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr
Probab=100.00 E-value=3.4e-39 Score=317.56 Aligned_cols=241 Identities=24% Similarity=0.383 Sum_probs=188.2
Q ss_pred cccccccceeEEEEEecCCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHH-HhccCCCCCccccceEEec
Q 011360 198 EKIGSGGCGEVYKAELPGSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEII-TASQIRHRNILPLLAHMVR 276 (487)
Q Consensus 198 ~~lg~G~~g~v~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~-~l~~l~hpnIv~l~~~~~~ 276 (487)
+.||.|+||.||+|.. ..+|+.||+|++... ..........+..|.. +++.++||||+++++++..
T Consensus 1 ~~lg~G~~g~V~~~~~-~~~~~~vaiK~~~~~------------~~~~~~~~~~~~~e~~~~~~~l~hp~iv~~~~~~~~ 67 (323)
T cd05575 1 KVIGKGSFGKVLLAKH-KADGKFYAVKVLQKK------------AILKKKEQKHIMAERNVLLKNVKHPFLVGLHYSFQT 67 (323)
T ss_pred CeeeeCCCeEEEEEEE-CCCCCEEEEEEEEHH------------HHhhhhHHHHHHHHHHHHHhhCCCCCCCCeeEEEEe
Confidence 4689999999999975 468899999988421 1111122334444444 5678899999999999999
Q ss_pred CCeeEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCCEEEecc
Q 011360 277 PDCHLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVLLNDDMEACISDL 356 (487)
Q Consensus 277 ~~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nill~~~~~~kl~DF 356 (487)
.+..|+||||+++|+|.+++.. ...+++..+..++.|++.||.|| |++||+||||||+|||++.++.+||+||
T Consensus 68 ~~~~~lv~e~~~~g~L~~~l~~----~~~~~~~~~~~~~~qi~~~l~~l---H~~givH~dikp~NIll~~~~~~kl~Df 140 (323)
T cd05575 68 ADKLYFVLDYVNGGELFFHLQR----ERSFPEPRARFYAAEIASALGYL---HSLNIIYRDLKPENILLDSQGHVVLTDF 140 (323)
T ss_pred CCEEEEEEcCCCCCCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHH---HHCCeEeCCCCHHHeEECCCCcEEEecc
Confidence 9999999999999999998864 45788999999999999999999 7788999999999999999999999999
Q ss_pred CCccccCCCCceeeEeeecccccccCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCccccCCCCccccHHHHHHHHhcC
Q 011360 357 GLAMAIPDGYTRVLISYVLGTMAYIAPEYFQQPELSEKCDIFSFGMLLISLVRGVPSFVFHQNGEEICSPEWLRKVMNSK 436 (487)
Q Consensus 357 g~s~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DvwslG~~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~ 436 (487)
|++........ ......||+.|+|||++.+..++.++|||||||++|+|++|..||.... ..+.........
T Consensus 141 g~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~------~~~~~~~i~~~~ 212 (323)
T cd05575 141 GLCKEGIEHSK--TTSTFCGTPEYLAPEVLRKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRD------TAEMYDNILNKP 212 (323)
T ss_pred CCCcccccCCC--ccccccCChhhcChhhhcCCCCCccccccccchhhhhhhcCCCCCCCCC------HHHHHHHHHcCC
Confidence 99875322211 1234568999999999999899999999999999999999999994332 122223332211
Q ss_pred CCCCccCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCChH
Q 011360 437 NPSRAIDPRLPGNGYEKKMLHVLKIAYICTLHDPEERPNSQ 477 (487)
Q Consensus 437 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~ 477 (487)
. .+.+.+ +..+.+++.+||+.||.+||++.
T Consensus 213 -~--~~~~~~--------~~~~~~li~~~l~~~p~~R~~~~ 242 (323)
T cd05575 213 -L--RLKPNI--------SVSARHLLEGLLQKDRTKRLGAK 242 (323)
T ss_pred -C--CCCCCC--------CHHHHHHHHHHhhcCHHhCCCCC
Confidence 1 112222 35688999999999999999985
No 133
>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=6.8e-39 Score=313.18 Aligned_cols=263 Identities=25% Similarity=0.335 Sum_probs=202.7
Q ss_pred cccccccccccccceeEEEEEecC------CCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccC-CC
Q 011360 192 DCFASLEKIGSGGCGEVYKAELPG------SNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQI-RH 264 (487)
Q Consensus 192 ~~~~~~~~lg~G~~g~v~~~~~~~------~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h 264 (487)
+.|.+.+.||+|+||.||++.... .++..+|+|.+.. .........+..|+.++..+ +|
T Consensus 18 ~~~~i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~--------------~~~~~~~~~~~~e~~~l~~l~~h 83 (307)
T cd05098 18 DRLVLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKS--------------DATEKDLSDLISEMEMMKMIGKH 83 (307)
T ss_pred HHeEEeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccC--------------CCChHHHHHHHHHHHHHHHhcCC
Confidence 469999999999999999997532 1235799998732 11223345678899999999 89
Q ss_pred CCccccceEEecCCeeEEEEEecCCCCHHHHHhhhhc------------CCCCCChHHHHHHHHHHHHHHHHHHhcCCCC
Q 011360 265 RNILPLLAHMVRPDCHLLVYEFMKNGSLQDILDDVSR------------GRRELDWPSRHRIALGVASGLEYLHMYHSAS 332 (487)
Q Consensus 265 pnIv~l~~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~------------~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~g 332 (487)
|||+++++++...+..|+||||+++|+|.+++..... ....+++..++.++.|++.||+|| |++|
T Consensus 84 ~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~l---H~~g 160 (307)
T cd05098 84 KNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYL---ASKK 160 (307)
T ss_pred CCEeeEEEEEecCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHH---HHCC
Confidence 9999999999999999999999999999999975321 123588899999999999999999 6778
Q ss_pred eeecCCCCCCEEeCCCCCEEEeccCCccccCCCCceeeEeeecccccccCCcccCCCCCCchhHHHHHHHHHHHHHh-CC
Q 011360 333 IIHGDIKPRNVLLNDDMEACISDLGLAMAIPDGYTRVLISYVLGTMAYIAPEYFQQPELSEKCDIFSFGMLLISLVR-GV 411 (487)
Q Consensus 333 ivH~Dlkp~Nill~~~~~~kl~DFg~s~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DvwslG~~l~ellt-g~ 411 (487)
++||||||+||+++.++.+||+|||.+................+++.|+|||++.+..++.++||||||+++|+|++ |.
T Consensus 161 i~H~dlkp~Nill~~~~~~kL~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~~g~ 240 (307)
T cd05098 161 CIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGG 240 (307)
T ss_pred cccccccHHheEEcCCCcEEECCCcccccccccchhhccccCCCccceeChHHhccCCCCcHHHHHHHHHHHHHHHcCCC
Confidence 99999999999999999999999999876543221111112234578999999998889999999999999999998 78
Q ss_pred CCccccCCCCccccHHHHHHHHhcCCCCCccCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCChHHHHHHHhhhC
Q 011360 412 PSFVFHQNGEEICSPEWLRKVMNSKNPSRAIDPRLPGNGYEKKMLHVLKIAYICTLHDPEERPNSQYVRCRLSQLL 487 (487)
Q Consensus 412 ~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~~il~~L~~ll 487 (487)
.||.... .+............. .+. ..+.++.+++.+||+.+|++|||+.++++.|+.++
T Consensus 241 ~p~~~~~-------~~~~~~~~~~~~~~~-----~~~----~~~~~~~~li~~~l~~~p~~Rps~~evl~~l~~~~ 300 (307)
T cd05098 241 SPYPGVP-------VEELFKLLKEGHRMD-----KPS----NCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIL 300 (307)
T ss_pred CCCCcCC-------HHHHHHHHHcCCCCC-----CCC----cCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHH
Confidence 8883221 222222222221111 111 12356889999999999999999999999998763
No 134
>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome. Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds
Probab=100.00 E-value=7.3e-39 Score=304.60 Aligned_cols=251 Identities=23% Similarity=0.307 Sum_probs=198.3
Q ss_pred ccccccccccccceeEEEEEecCCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCCCCccccce
Q 011360 193 CFASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQIRHRNILPLLA 272 (487)
Q Consensus 193 ~~~~~~~lg~G~~g~v~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~ 272 (487)
+|.+.+.||.|+||.||+|.+. ++..+|+|.+... ......+.+|+.++.+++||||+++++
T Consensus 5 ~~~~~~~lg~G~~~~vy~~~~~--~~~~~aik~~~~~----------------~~~~~~~~~e~~~l~~l~h~~i~~~~~ 66 (256)
T cd05113 5 DLTFLKELGTGQFGVVKYGKWR--GQYDVAIKMIKEG----------------SMSEDEFIEEAKVMMKLSHEKLVQLYG 66 (256)
T ss_pred HeEEeeEecCcccceEEEEEec--CCCcEEEEEcCCC----------------cccHHHHHHHHHHHhcCCCCCeeeEEE
Confidence 5889999999999999999764 4456999986321 112345788999999999999999999
Q ss_pred EEecCCeeEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCCEE
Q 011360 273 HMVRPDCHLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVLLNDDMEAC 352 (487)
Q Consensus 273 ~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nill~~~~~~k 352 (487)
++...+..+++|||+.+|+|.+++.. ....+++..++.++.|++.||.|| |+.|++|+||+|+||+++.++.+|
T Consensus 67 ~~~~~~~~~lv~e~~~~~~l~~~i~~---~~~~~~~~~~~~~~~~i~~~l~~l---H~~~i~H~dl~p~nili~~~~~~k 140 (256)
T cd05113 67 VCTKQRPIYIVTEYMSNGCLLNYLRE---HGKRFQPSQLLEMCKDVCEGMAYL---ESKQFIHRDLAARNCLVDDQGCVK 140 (256)
T ss_pred EEccCCCcEEEEEcCCCCcHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHH---HhCCeeccccCcceEEEcCCCCEE
Confidence 99998999999999999999999864 233689999999999999999999 778899999999999999999999
Q ss_pred EeccCCccccCCCCceeeEeeecccccccCCcccCCCCCCchhHHHHHHHHHHHHHh-CCCCccccCCCCccccHHHHHH
Q 011360 353 ISDLGLAMAIPDGYTRVLISYVLGTMAYIAPEYFQQPELSEKCDIFSFGMLLISLVR-GVPSFVFHQNGEEICSPEWLRK 431 (487)
Q Consensus 353 l~DFg~s~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DvwslG~~l~ellt-g~~pf~~~~~~~~~~~~~~~~~ 431 (487)
|+|||.+.......... .....++..|+|||.+.+..++.++||||||+++|+|++ |..||.... ..+....
T Consensus 141 l~d~g~~~~~~~~~~~~-~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~------~~~~~~~ 213 (256)
T cd05113 141 VSDFGLSRYVLDDEYTS-SVGSKFPVRWSPPEVLLYSKFSSKSDVWAFGVLMWEVYSLGKMPYERFN------NSETVEK 213 (256)
T ss_pred ECCCccceecCCCceee-cCCCccChhhCCHHHHhcCcccchhHHHHHHHHHHHHhcCCCCCcCcCC------HHHHHHH
Confidence 99999987654432211 112235678999999988889999999999999999999 899984322 1222222
Q ss_pred HHhcCCCCCccCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCChHHHHHHHh
Q 011360 432 VMNSKNPSRAIDPRLPGNGYEKKMLHVLKIAYICTLHDPEERPNSQYVRCRLS 484 (487)
Q Consensus 432 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~~il~~L~ 484 (487)
......+. .+.. .+..+.+++.+||+.+|.+|||+.+|++.|+
T Consensus 214 ~~~~~~~~------~~~~----~~~~~~~li~~cl~~~p~~Rp~~~~ll~~~~ 256 (256)
T cd05113 214 VSQGLRLY------RPHL----ASEKVYAIMYSCWHEKAEERPTFQQLLSSIE 256 (256)
T ss_pred HhcCCCCC------CCCC----CCHHHHHHHHHHcCCCcccCCCHHHHHHhhC
Confidence 22221110 1111 2356899999999999999999999998764
No 135
>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]
Probab=100.00 E-value=2e-39 Score=302.30 Aligned_cols=264 Identities=24% Similarity=0.354 Sum_probs=201.6
Q ss_pred ccccccccccccceeEEEEEecCCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCCCC-ccccc
Q 011360 193 CFASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQIRHRN-ILPLL 271 (487)
Q Consensus 193 ~~~~~~~lg~G~~g~v~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpn-Iv~l~ 271 (487)
.|..+++||+|+||+||+|+. ..+|+.||+|++..... .+..-....+|+.+++.++|+| ||+++
T Consensus 12 ~~~~~eklGeGtyg~Vykar~-~~~g~~VALKkirl~~~-------------~EG~P~taiREisllk~L~~~~~iv~L~ 77 (323)
T KOG0594|consen 12 DYEKVEKLGEGTYGVVYKARS-KRTGKFVALKKIRLEFE-------------EEGVPSTAIREISLLKRLSHANHIVRLH 77 (323)
T ss_pred HHHHHHHhCCCCceEEEEEEE-ecCCCEEEEEEEecccc-------------ccCCCchhhHHHHHHHHhCCCcceEEEE
Confidence 478888999999999999975 46889999999965221 0112234578999999999999 99999
Q ss_pred eEEecCC------eeEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEe
Q 011360 272 AHMVRPD------CHLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVLL 345 (487)
Q Consensus 272 ~~~~~~~------~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nill 345 (487)
+++...+ .+++||||+ .-+|..+++........++...++.++.|++.||+|| |+++|+||||||.|||+
T Consensus 78 dv~~~~~~~~~~~~l~lvfe~~-d~DL~~ymd~~~~~~~g~~~~~ik~~m~Qll~gl~~~---H~~~IlHRDLKPQNlLi 153 (323)
T KOG0594|consen 78 DVIHTSNNHRGIGKLYLVFEFL-DRDLKKYMDSLPKKPQGLPPRLIKSFMRQLLRGLAFL---HSHGILHRDLKPQNLLI 153 (323)
T ss_pred eeeeecccccccceEEEEEEee-cccHHHHHHhccccccCCCHHHHHHHHHHHHHHHHHH---HhCCeecccCCcceEEE
Confidence 9999877 789999999 5599999987543334577788999999999999999 88899999999999999
Q ss_pred CCCCCEEEeccCCccccCCCCceeeEeeecccccccCCcccCCC-CCCchhHHHHHHHHHHHHHhCCCCccccCCCCccc
Q 011360 346 NDDMEACISDLGLAMAIPDGYTRVLISYVLGTMAYIAPEYFQQP-ELSEKCDIFSFGMLLISLVRGVPSFVFHQNGEEIC 424 (487)
Q Consensus 346 ~~~~~~kl~DFg~s~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~-~~~~~~DvwslG~~l~elltg~~pf~~~~~~~~~~ 424 (487)
+++|.+||+|||+|+...-.... .+..++|.+|.|||++.+. .|+...||||+||++.||+++++.|.+...
T Consensus 154 ~~~G~lKlaDFGlAra~~ip~~~--yt~evvTlWYRaPEvLlGs~~Ys~~vDiWs~GcIfaEm~~~~~LFpG~se----- 226 (323)
T KOG0594|consen 154 SSSGVLKLADFGLARAFSIPMRT--YTPEVVTLWYRAPEVLLGSTSYSTSVDIWSLGCIFAEMFTRRPLFPGDSE----- 226 (323)
T ss_pred CCCCcEeeeccchHHHhcCCccc--ccccEEEeeccCHHHhcCCCcCCCCcchHhHHHHHHHHHhCCCCCCCCcH-----
Confidence 99999999999999876533221 2455689999999999877 899999999999999999999999966543
Q ss_pred cHHHHHHHHh-cCCCC-CccC------------CCCC-CCC----cHHHHHHHHHHHhhccCCCCCCCCChHHHHHH
Q 011360 425 SPEWLRKVMN-SKNPS-RAID------------PRLP-GNG----YEKKMLHVLKIAYICTLHDPEERPNSQYVRCR 482 (487)
Q Consensus 425 ~~~~~~~~~~-~~~~~-~~~~------------~~~~-~~~----~~~~~~~l~~li~~cl~~~P~~RPs~~~il~~ 482 (487)
...+..++. -+.|. ..++ +..+ ... .+....+..+++.+||+.+|.+|.|++.++..
T Consensus 227 -~~ql~~If~~lGtP~e~~Wp~v~~~~~~k~~f~~~~~~~~l~~~~~~~~~~~~dll~~~L~y~p~~R~Sa~~al~h 302 (323)
T KOG0594|consen 227 -IDQLFRIFRLLGTPNEKDWPGVSSLPDYKAPFPKWPGPKDLSSILPKLDPDGIELLSKLLQYDPAKRISAKGALTH 302 (323)
T ss_pred -HHHHHHHHHHcCCCCccCCCCccccccccccCcCCCCccchHHhccccCccHHHHHHHHhccCcccCcCHHHHhcC
Confidence 111111111 01110 0000 0000 000 01111368899999999999999999998763
No 136
>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt
Probab=100.00 E-value=3.4e-39 Score=317.85 Aligned_cols=244 Identities=24% Similarity=0.349 Sum_probs=188.4
Q ss_pred cccccccceeEEEEEecCCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHH-HHhccCCCCCccccceEEec
Q 011360 198 EKIGSGGCGEVYKAELPGSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEI-ITASQIRHRNILPLLAHMVR 276 (487)
Q Consensus 198 ~~lg~G~~g~v~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~-~~l~~l~hpnIv~l~~~~~~ 276 (487)
+.||.|+||.||+|+. ..++..||+|++... ..........+..|. .+++.++||||+++++++..
T Consensus 1 ~~lg~G~fg~V~~~~~-~~~~~~~aiK~~~~~------------~~~~~~~~~~~~~e~~~~l~~~~h~~Iv~~~~~~~~ 67 (325)
T cd05602 1 KVIGKGSFGKVLLARH-KAEEKFYAVKVLQKK------------AILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQT 67 (325)
T ss_pred CeeeeCCCeEEEEEEE-CCCCCEEEEEEEEHH------------HHHhhhHHHHHHHHHHHHHHhCCCCCCCceeEEEEc
Confidence 3689999999999975 457889999988421 011111223333443 45678899999999999999
Q ss_pred CCeeEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCCEEEecc
Q 011360 277 PDCHLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVLLNDDMEACISDL 356 (487)
Q Consensus 277 ~~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nill~~~~~~kl~DF 356 (487)
.+..|+||||+++|+|.+++.. ...+++..+..++.|++.||.|| |++||+||||||+|||++.++.+||+||
T Consensus 68 ~~~~~lv~e~~~~~~L~~~~~~----~~~~~~~~~~~~~~qi~~~L~~l---H~~giiHrDlkp~Nili~~~~~~kl~Df 140 (325)
T cd05602 68 ADKLYFVLDYINGGELFYHLQR----ERCFLEPRARFYAAEIASALGYL---HSLNIVYRDLKPENILLDSQGHIVLTDF 140 (325)
T ss_pred CCeEEEEEeCCCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHH---HHCCeEecCCCHHHeEECCCCCEEEccC
Confidence 9999999999999999998864 45678888999999999999999 7789999999999999999999999999
Q ss_pred CCccccCCCCceeeEeeecccccccCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCccccCCCCccccHHHHHHHHhcC
Q 011360 357 GLAMAIPDGYTRVLISYVLGTMAYIAPEYFQQPELSEKCDIFSFGMLLISLVRGVPSFVFHQNGEEICSPEWLRKVMNSK 436 (487)
Q Consensus 357 g~s~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DvwslG~~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~ 436 (487)
|++........ ......||+.|+|||++.+..++.++|||||||++|+|++|.+||.... ..+.........
T Consensus 141 G~a~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~------~~~~~~~i~~~~ 212 (325)
T cd05602 141 GLCKENIEHNG--TTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRN------TAEMYDNILNKP 212 (325)
T ss_pred CCCcccccCCC--CcccccCCccccCHHHHcCCCCCCccccccccHHHHHHhcCCCCCCCCC------HHHHHHHHHhCC
Confidence 99875432211 1234569999999999999999999999999999999999999994322 122223332211
Q ss_pred CCCCccCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCChHHHH
Q 011360 437 NPSRAIDPRLPGNGYEKKMLHVLKIAYICTLHDPEERPNSQYVR 480 (487)
Q Consensus 437 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~~il 480 (487)
. .+.+.+ +..+.+++.+||+.+|.+||++.+.+
T Consensus 213 -~--~~~~~~--------~~~~~~li~~~l~~~p~~R~~~~~~~ 245 (325)
T cd05602 213 -L--QLKPNI--------TNSARHLLEGLLQKDRTKRLGAKDDF 245 (325)
T ss_pred -c--CCCCCC--------CHHHHHHHHHHcccCHHHCCCCCCCH
Confidence 1 112222 24588999999999999999987543
No 137
>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase). Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It
Probab=100.00 E-value=1.4e-38 Score=306.62 Aligned_cols=263 Identities=22% Similarity=0.330 Sum_probs=205.7
Q ss_pred ccccccccccccccceeEEEEEecCC---CCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCCCCc
Q 011360 191 EDCFASLEKIGSGGCGEVYKAELPGS---NGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQIRHRNI 267 (487)
Q Consensus 191 ~~~~~~~~~lg~G~~g~v~~~~~~~~---~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnI 267 (487)
.++|.+.+.||+|+||.||+|.+... ++..|++|.+.. .........+.+|+.+++.++||||
T Consensus 5 ~~~~~~~~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~--------------~~~~~~~~~~~~e~~~l~~l~h~ni 70 (280)
T cd05043 5 RDRVTLSDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKD--------------HASEIQVTLLLQESCLLYGLSHQNI 70 (280)
T ss_pred hhheEEeeeecccCCceEEEEEEecCCCCceeEEEEEEccC--------------CCCHHHHHHHHHHHHHHHhCCCCCC
Confidence 35689999999999999999987532 267899998632 1223345677889999999999999
Q ss_pred cccceEEec-CCeeEEEEEecCCCCHHHHHhhhhcC----CCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCC
Q 011360 268 LPLLAHMVR-PDCHLLVYEFMKNGSLQDILDDVSRG----RRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRN 342 (487)
Q Consensus 268 v~l~~~~~~-~~~~~lv~E~~~~gsL~~~l~~~~~~----~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~N 342 (487)
+++++++.. +...+++++|+++++|.+++...... +..+++..+..++.|++.||.|| |+++++||||||+|
T Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~L---H~~~i~H~di~p~n 147 (280)
T cd05043 71 LPILHVCIEDGEPPFVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYL---HKRGVIHKDIAARN 147 (280)
T ss_pred CeEEEEEecCCCCCEEEEEcCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHH---HHCCEeecccCHhh
Confidence 999998765 57789999999999999999764322 25689999999999999999999 67789999999999
Q ss_pred EEeCCCCCEEEeccCCccccCCCCceeeEeeecccccccCCcccCCCCCCchhHHHHHHHHHHHHHh-CCCCccccCCCC
Q 011360 343 VLLNDDMEACISDLGLAMAIPDGYTRVLISYVLGTMAYIAPEYFQQPELSEKCDIFSFGMLLISLVR-GVPSFVFHQNGE 421 (487)
Q Consensus 343 ill~~~~~~kl~DFg~s~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DvwslG~~l~ellt-g~~pf~~~~~~~ 421 (487)
|+++.++.+||+|||+++.+.............++..|+|||++.+..++.++||||||+++|++++ |..||....
T Consensus 148 il~~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~--- 224 (280)
T cd05043 148 CVIDEELQVKITDNALSRDLFPMDYHCLGDNENRPVKWMALESLVNKEYSSASDVWSFGVLLWELMTLGQTPYVEID--- 224 (280)
T ss_pred EEEcCCCcEEECCCCCcccccCCceEEeCCCCCcchhccCHHHHhcCCCCchhhHHHhHHHHHHHhcCCCCCcCcCC---
Confidence 9999999999999999986644332222223346778999999988889999999999999999999 999994321
Q ss_pred ccccHHHHHHHHhcCCCCCccCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCChHHHHHHHhhh
Q 011360 422 EICSPEWLRKVMNSKNPSRAIDPRLPGNGYEKKMLHVLKIAYICTLHDPEERPNSQYVRCRLSQL 486 (487)
Q Consensus 422 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~~il~~L~~l 486 (487)
..++.........+.. .. ..+.++.+++.+||..+|++|||+.++++.|+++
T Consensus 225 ---~~~~~~~~~~~~~~~~--~~--------~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~~~ 276 (280)
T cd05043 225 ---PFEMAAYLKDGYRLAQ--PI--------NCPDELFAVMACCWALDPEERPSFSQLVQCLTDF 276 (280)
T ss_pred ---HHHHHHHHHcCCCCCC--CC--------cCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHH
Confidence 1222222222211111 11 1235688999999999999999999999999876
No 138
>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5. Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p
Probab=100.00 E-value=1.3e-38 Score=306.85 Aligned_cols=251 Identities=25% Similarity=0.359 Sum_probs=197.0
Q ss_pred ccccccccccccceeEEEEEecCCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCCCCccccce
Q 011360 193 CFASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQIRHRNILPLLA 272 (487)
Q Consensus 193 ~~~~~~~lg~G~~g~v~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~ 272 (487)
+|.+.+.||.|+||.||+|.. ..++..||+|.+... ........+.+|+.++.+++||||+++++
T Consensus 2 ~~~~~~~lg~g~~~~v~~~~~-~~~~~~~aiK~~~~~--------------~~~~~~~~~~~E~~~l~~l~h~~iv~~~~ 66 (279)
T cd06619 2 DIQYQEILGHGNGGTVYKAYH-LLTRRILAVKVIPLD--------------ITVELQKQIMSELEILYKCDSPYIIGFYG 66 (279)
T ss_pred cchheeeeccCCCeEEEEEEE-cCCCcEEEEEEEecC--------------CChHHHHHHHHHHHHHHhCCCCCeeeEEE
Confidence 578889999999999999974 457889999987421 12223456888999999999999999999
Q ss_pred EEecCCeeEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCCEE
Q 011360 273 HMVRPDCHLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVLLNDDMEAC 352 (487)
Q Consensus 273 ~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nill~~~~~~k 352 (487)
++...+..++||||+++++|..+. .+++..+..++.|++.||.|| |+.||+|+||||+||+++.++.++
T Consensus 67 ~~~~~~~~~lv~e~~~~~~l~~~~--------~~~~~~~~~~~~qi~~~l~~l---H~~~i~H~dlkp~Nill~~~~~~~ 135 (279)
T cd06619 67 AFFVENRISICTEFMDGGSLDVYR--------KIPEHVLGRIAVAVVKGLTYL---WSLKILHRDVKPSNMLVNTRGQVK 135 (279)
T ss_pred EEEECCEEEEEEecCCCCChHHhh--------cCCHHHHHHHHHHHHHHHHHH---HHCCEeeCCCCHHHEEECCCCCEE
Confidence 999999999999999999996542 367888899999999999999 778899999999999999999999
Q ss_pred EeccCCccccCCCCceeeEeeecccccccCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCccccCCCCccccHHHHHHH
Q 011360 353 ISDLGLAMAIPDGYTRVLISYVLGTMAYIAPEYFQQPELSEKCDIFSFGMLLISLVRGVPSFVFHQNGEEICSPEWLRKV 432 (487)
Q Consensus 353 l~DFg~s~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DvwslG~~l~elltg~~pf~~~~~~~~~~~~~~~~~~ 432 (487)
|+|||++........ ....||..|+|||++.+..++.++|+||||+++|+|++|..||..................
T Consensus 136 l~dfg~~~~~~~~~~----~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~ 211 (279)
T cd06619 136 LCDFGVSTQLVNSIA----KTYVGTNAYMAPERISGEQYGIHSDVWSLGISFMELALGRFPYPQIQKNQGSLMPLQLLQC 211 (279)
T ss_pred EeeCCcceecccccc----cCCCCChhhcCceeecCCCCCCcchHHHHHHHHHHHHhCCCCchhhcccccccchHHHHHH
Confidence 999999976543322 3356899999999999889999999999999999999999999653322221111111111
Q ss_pred HhcCCCCCccCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCChHHHHH
Q 011360 433 MNSKNPSRAIDPRLPGNGYEKKMLHVLKIAYICTLHDPEERPNSQYVRC 481 (487)
Q Consensus 433 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~~il~ 481 (487)
.....+.. ++. .....++.+++.+||+.+|.+||+++++++
T Consensus 212 ~~~~~~~~-----~~~---~~~~~~~~~li~~~l~~~P~~Rp~~~eil~ 252 (279)
T cd06619 212 IVDEDPPV-----LPV---GQFSEKFVHFITQCMRKQPKERPAPENLMD 252 (279)
T ss_pred HhccCCCC-----CCC---CcCCHHHHHHHHHHhhCChhhCCCHHHHhc
Confidence 11111111 111 112346889999999999999999999875
No 139
>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2. Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve
Probab=100.00 E-value=2.2e-38 Score=305.17 Aligned_cols=258 Identities=21% Similarity=0.301 Sum_probs=199.6
Q ss_pred ccccccccccccccceeEEEEEecCCCCc----eEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCCCC
Q 011360 191 EDCFASLEKIGSGGCGEVYKAELPGSNGK----MIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQIRHRN 266 (487)
Q Consensus 191 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~----~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpn 266 (487)
.++|.+.+.||.|+||.||+|++.. ++. .||+|.+.. .........+.+|+.++..+.|||
T Consensus 6 ~~~~~~~~~lg~G~~g~vy~~~~~~-~~~~~~~~va~K~~~~--------------~~~~~~~~~~~~e~~~l~~~~~~~ 70 (279)
T cd05109 6 ETELKKVKVLGSGAFGTVYKGIWIP-DGENVKIPVAIKVLRE--------------NTSPKANKEILDEAYVMAGVGSPY 70 (279)
T ss_pred hhheeeeeecCCCCCceEEEEEEec-CCCccceEEEEEEecC--------------CCCHHHHHHHHHHHHHHHhcCCCC
Confidence 3468999999999999999998643 333 489998732 112233456788999999999999
Q ss_pred ccccceEEecCCeeEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeC
Q 011360 267 ILPLLAHMVRPDCHLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVLLN 346 (487)
Q Consensus 267 Iv~l~~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nill~ 346 (487)
|+++++++.. ...+++|||+++|+|.+++.. ....+++..+..++.|++.||.|| |++|++||||||+||+++
T Consensus 71 i~~~~~~~~~-~~~~l~~~~~~~g~l~~~l~~---~~~~~~~~~~~~~~~qi~~~L~~l---H~~~iiH~dlkp~Nil~~ 143 (279)
T cd05109 71 VCRLLGICLT-STVQLVTQLMPYGCLLDYVRE---NKDRIGSQDLLNWCVQIAKGMSYL---EEVRLVHRDLAARNVLVK 143 (279)
T ss_pred CceEEEEEcC-CCcEEEEEcCCCCCHHHHHhh---ccCCCCHHHHHHHHHHHHHHHHHH---HHCCeeccccccceEEEc
Confidence 9999998875 456899999999999999864 235689999999999999999999 778899999999999999
Q ss_pred CCCCEEEeccCCccccCCCCceeeEeeecccccccCCcccCCCCCCchhHHHHHHHHHHHHHh-CCCCccccCCCCcccc
Q 011360 347 DDMEACISDLGLAMAIPDGYTRVLISYVLGTMAYIAPEYFQQPELSEKCDIFSFGMLLISLVR-GVPSFVFHQNGEEICS 425 (487)
Q Consensus 347 ~~~~~kl~DFg~s~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DvwslG~~l~ellt-g~~pf~~~~~~~~~~~ 425 (487)
+++.+||+|||+++...............+++.|+|||.+.+..++.++|||||||++|||++ |..||.....
T Consensus 144 ~~~~~kL~dfG~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~------ 217 (279)
T cd05109 144 SPNHVKITDFGLARLLDIDETEYHADGGKVPIKWMALESILHRRFTHQSDVWSYGVTVWELMTFGAKPYDGIPA------ 217 (279)
T ss_pred CCCcEEECCCCceeecccccceeecCCCccchhhCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCH------
Confidence 999999999999987654332221122335678999999998899999999999999999998 8999843221
Q ss_pred HHHHHHHHhcCCCCCccCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCChHHHHHHHhhh
Q 011360 426 PEWLRKVMNSKNPSRAIDPRLPGNGYEKKMLHVLKIAYICTLHDPEERPNSQYVRCRLSQL 486 (487)
Q Consensus 426 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~~il~~L~~l 486 (487)
.............. .++ ..+.++.+++.+||..||++|||+.+++..|+++
T Consensus 218 -~~~~~~~~~~~~~~-~~~--------~~~~~~~~li~~~l~~dp~~Rp~~~~l~~~l~~~ 268 (279)
T cd05109 218 -REIPDLLEKGERLP-QPP--------ICTIDVYMIMVKCWMIDSECRPRFRELVDEFSRM 268 (279)
T ss_pred -HHHHHHHHCCCcCC-CCc--------cCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHh
Confidence 11222222221111 011 1235688999999999999999999999988764
No 140
>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I
Probab=100.00 E-value=5e-39 Score=315.24 Aligned_cols=244 Identities=26% Similarity=0.337 Sum_probs=189.9
Q ss_pred cccccccceeEEEEEecCCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhcc-CCCCCccccceEEec
Q 011360 198 EKIGSGGCGEVYKAELPGSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQ-IRHRNILPLLAHMVR 276 (487)
Q Consensus 198 ~~lg~G~~g~v~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~-l~hpnIv~l~~~~~~ 276 (487)
+.||.|+||.||+|+. ..++..||+|.+... .............|..++.. ++||||+++++++..
T Consensus 1 ~~lg~G~~g~V~~~~~-~~~~~~~avK~~~~~------------~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~ 67 (316)
T cd05620 1 KVLGKGSFGKVLLAEL-KGKGEYFAVKALKKD------------VVLIDDDVECTMVEKRVLALAWENPFLTHLYCTFQT 67 (316)
T ss_pred CeeeeCCCeEEEEEEE-CCCCCEEEEEEEEHH------------HhhhcchHHHHHHHHHHHHhccCCCCccCeeEEEEe
Confidence 4699999999999975 457899999988420 01112234455667777765 489999999999999
Q ss_pred CCeeEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCCEEEecc
Q 011360 277 PDCHLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVLLNDDMEACISDL 356 (487)
Q Consensus 277 ~~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nill~~~~~~kl~DF 356 (487)
.+.+|+||||+.+|+|.+++.. ...+++..+..++.|++.||+|| |++||+||||||+||+++.++.++|+||
T Consensus 68 ~~~~~lv~E~~~~g~L~~~i~~----~~~~~~~~~~~~~~qi~~~l~~l---H~~~ivHrDlkp~Nil~~~~~~~kl~Df 140 (316)
T cd05620 68 KEHLFFVMEFLNGGDLMFHIQD----KGRFDLYRATFYAAEIVCGLQFL---HSKGIIYRDLKLDNVMLDRDGHIKIADF 140 (316)
T ss_pred CCEEEEEECCCCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHH---HHCCeEecCCCHHHeEECCCCCEEeCcc
Confidence 9999999999999999998864 45688999999999999999999 7788999999999999999999999999
Q ss_pred CCccccCCCCceeeEeeecccccccCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCccccCCCCccccHHHHHHHHhcC
Q 011360 357 GLAMAIPDGYTRVLISYVLGTMAYIAPEYFQQPELSEKCDIFSFGMLLISLVRGVPSFVFHQNGEEICSPEWLRKVMNSK 436 (487)
Q Consensus 357 g~s~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DvwslG~~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~ 436 (487)
|++........ ......||+.|+|||++.+..++.++|||||||++|+|++|..||..... .+..... ...
T Consensus 141 g~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~Pf~~~~~------~~~~~~~-~~~ 211 (316)
T cd05620 141 GMCKENVFGDN--RASTFCGTPDYIAPEILQGLKYTFSVDWWSFGVLLYEMLIGQSPFHGDDE------DELFESI-RVD 211 (316)
T ss_pred CCCeecccCCC--ceeccCCCcCccCHHHHcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCH------HHHHHHH-HhC
Confidence 99865322211 12346689999999999999999999999999999999999999943321 1222222 111
Q ss_pred CCCCccCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCChH-HHH
Q 011360 437 NPSRAIDPRLPGNGYEKKMLHVLKIAYICTLHDPEERPNSQ-YVR 480 (487)
Q Consensus 437 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~-~il 480 (487)
.+ .++.. ...++.+++.+||+.||++||++. +++
T Consensus 212 ~~------~~~~~----~~~~~~~li~~~l~~dP~~R~~~~~~~~ 246 (316)
T cd05620 212 TP------HYPRW----ITKESKDILEKLFERDPTRRLGVVGNIR 246 (316)
T ss_pred CC------CCCCC----CCHHHHHHHHHHccCCHHHcCCChHHHH
Confidence 11 11111 234688999999999999999985 554
No 141
>PTZ00036 glycogen synthase kinase; Provisional
Probab=100.00 E-value=2.9e-39 Score=330.19 Aligned_cols=258 Identities=21% Similarity=0.294 Sum_probs=191.9
Q ss_pred ccccccccccccccceeEEEEEecCCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCCCCcccc
Q 011360 191 EDCFASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQIRHRNILPL 270 (487)
Q Consensus 191 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l 270 (487)
...|.+.+.||.|+||.||+|.. ..++..||||++... .....+|+.+++.++||||+++
T Consensus 65 ~~~y~~~~~LG~G~fg~Vy~~~~-~~~~~~vAiK~i~~~-------------------~~~~~~Ei~il~~l~h~niv~l 124 (440)
T PTZ00036 65 NKSYKLGNIIGNGSFGVVYEAIC-IDTSEKVAIKKVLQD-------------------PQYKNRELLIMKNLNHINIIFL 124 (440)
T ss_pred CCeEEEeEEEEeCCCEEEEEEEE-CCCCCEEEEEEEecC-------------------cchHHHHHHHHHhcCCCCCcce
Confidence 34699999999999999999975 457889999987321 0122468999999999999999
Q ss_pred ceEEecC--------CeeEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCC
Q 011360 271 LAHMVRP--------DCHLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRN 342 (487)
Q Consensus 271 ~~~~~~~--------~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~N 342 (487)
++++... ..+++||||++ ++|.+++.........+++..+..++.|++.||.|| |++||+||||||+|
T Consensus 125 ~~~~~~~~~~~~~~~~~l~lvmE~~~-~~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~gL~yL---H~~~IiHrDLKp~N 200 (440)
T PTZ00036 125 KDYYYTECFKKNEKNIFLNVVMEFIP-QTVHKYMKHYARNNHALPLFLVKLYSYQLCRALAYI---HSKFICHRDLKPQN 200 (440)
T ss_pred eeeEeecccccCCCceEEEEEEecCC-ccHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHH---HHCCEecCCcCHHH
Confidence 9876432 24678999996 578888876555667899999999999999999999 77889999999999
Q ss_pred EEeCCCC-CEEEeccCCccccCCCCceeeEeeecccccccCCcccCC-CCCCchhHHHHHHHHHHHHHhCCCCccccCCC
Q 011360 343 VLLNDDM-EACISDLGLAMAIPDGYTRVLISYVLGTMAYIAPEYFQQ-PELSEKCDIFSFGMLLISLVRGVPSFVFHQNG 420 (487)
Q Consensus 343 ill~~~~-~~kl~DFg~s~~~~~~~~~~~~~~~~gt~~y~aPE~l~~-~~~~~~~DvwslG~~l~elltg~~pf~~~~~~ 420 (487)
||++.++ .+||+|||+++........ ....||+.|+|||++.+ ..|+.++|||||||++|||++|.+||.+....
T Consensus 201 ILl~~~~~~vkL~DFGla~~~~~~~~~---~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~ 277 (440)
T PTZ00036 201 LLIDPNTHTLKLCDFGSAKNLLAGQRS---VSYICSRFYRAPELMLGATNYTTHIDLWSLGCIIAEMILGYPIFSGQSSV 277 (440)
T ss_pred EEEcCCCCceeeeccccchhccCCCCc---ccCCCCcCccCHHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChH
Confidence 9999664 6999999999876443221 23568999999998865 47899999999999999999999999554321
Q ss_pred CccccHHHHHHHHh-cCCCC---------CccCCCCCCC--------CcHHHHHHHHHHHhhccCCCCCCCCChHHHHH
Q 011360 421 EEICSPEWLRKVMN-SKNPS---------RAIDPRLPGN--------GYEKKMLHVLKIAYICTLHDPEERPNSQYVRC 481 (487)
Q Consensus 421 ~~~~~~~~~~~~~~-~~~~~---------~~~~~~~~~~--------~~~~~~~~l~~li~~cl~~~P~~RPs~~~il~ 481 (487)
+.+..... -+.+. ...+..++.. .....+.++.+++.+||..||.+|||+.++++
T Consensus 278 ------~~~~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~li~~~L~~dP~~R~ta~e~l~ 350 (440)
T PTZ00036 278 ------DQLVRIIQVLGTPTEDQLKEMNPNYADIKFPDVKPKDLKKVFPKGTPDDAINFISQFLKYEPLKRLNPIEALA 350 (440)
T ss_pred ------HHHHHHHHHhCCCCHHHHHHhchhhhcccCCccCchhHHHHhccCCCHHHHHHHHHHCCCChhHCcCHHHHhC
Confidence 11111110 00000 0000001100 00112357889999999999999999999874
No 142
>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit
Probab=100.00 E-value=6.4e-39 Score=311.70 Aligned_cols=268 Identities=21% Similarity=0.328 Sum_probs=201.0
Q ss_pred cccccccccccccceeEEEEEec---------------CCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHH
Q 011360 192 DCFASLEKIGSGGCGEVYKAELP---------------GSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEI 256 (487)
Q Consensus 192 ~~~~~~~~lg~G~~g~v~~~~~~---------------~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~ 256 (487)
++|++.+.||.|+||.||++.+. ..++..+|+|.+.. .........+.+|+
T Consensus 5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~--------------~~~~~~~~~~~~E~ 70 (296)
T cd05095 5 KRLTFKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLRE--------------DANKNARNDFLKEI 70 (296)
T ss_pred hhceeeeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccc--------------cCCHHHHHHHHHHH
Confidence 46999999999999999998532 12345689998732 11223456788999
Q ss_pred HHhccCCCCCccccceEEecCCeeEEEEEecCCCCHHHHHhhhhcC-------CCCCChHHHHHHHHHHHHHHHHHHhcC
Q 011360 257 ITASQIRHRNILPLLAHMVRPDCHLLVYEFMKNGSLQDILDDVSRG-------RRELDWPSRHRIALGVASGLEYLHMYH 329 (487)
Q Consensus 257 ~~l~~l~hpnIv~l~~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~-------~~~l~~~~~~~i~~qi~~~L~~Lh~~h 329 (487)
.+++.++||||+++++++...+..+++|||+++|+|.+++...... ...+++..+..++.|++.||+|| |
T Consensus 71 ~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~l---H 147 (296)
T cd05095 71 KIMSRLKDPNIIRLLAVCITSDPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYL---S 147 (296)
T ss_pred HHHHhCCCCCcceEEEEEecCCccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHH---H
Confidence 9999999999999999999999999999999999999998753211 23477888999999999999999 7
Q ss_pred CCCeeecCCCCCCEEeCCCCCEEEeccCCccccCCCCceeeEeeecccccccCCcccCCCCCCchhHHHHHHHHHHHHHh
Q 011360 330 SASIIHGDIKPRNVLLNDDMEACISDLGLAMAIPDGYTRVLISYVLGTMAYIAPEYFQQPELSEKCDIFSFGMLLISLVR 409 (487)
Q Consensus 330 ~~givH~Dlkp~Nill~~~~~~kl~DFg~s~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DvwslG~~l~ellt 409 (487)
+.|++||||||+||+++.++.++|+|||++................+++.|+|||...++.++.++|||||||++|||++
T Consensus 148 ~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~DiwSlG~~l~el~~ 227 (296)
T cd05095 148 SLNFVHRDLATRNCLVGKNYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMSWESILLGKFTTASDVWAFGVTLWEILT 227 (296)
T ss_pred HCCeecccCChheEEEcCCCCEEeccCcccccccCCcceeccCcCcCccccCCHHHHhcCCccchhhhhHHHHHHHHHHH
Confidence 77899999999999999999999999999976544322222222345678999999888889999999999999999998
Q ss_pred --CCCCccccCCCCccccHHHHHHHHhcCCCCCccCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCChHHHHHHHhh
Q 011360 410 --GVPSFVFHQNGEEICSPEWLRKVMNSKNPSRAIDPRLPGNGYEKKMLHVLKIAYICTLHDPEERPNSQYVRCRLSQ 485 (487)
Q Consensus 410 --g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~~il~~L~~ 485 (487)
|..||......... ...............++ .+. ..+..+.+++.+||+.||++|||+.+|++.|++
T Consensus 228 ~~~~~p~~~~~~~~~~---~~~~~~~~~~~~~~~~~--~~~----~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~~ 296 (296)
T cd05095 228 LCKEQPYSQLSDEQVI---ENTGEFFRDQGRQVYLP--KPA----LCPDSLYKLMLSCWRRNAKERPSFQEIHATLLE 296 (296)
T ss_pred hCCCCCccccChHHHH---HHHHHHHhhccccccCC--CCC----CCCHHHHHHHHHHcCCCcccCCCHHHHHHHHhC
Confidence 67888433221111 11111111111100000 111 122568899999999999999999999999864
No 143
>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc
Probab=100.00 E-value=1.5e-38 Score=302.02 Aligned_cols=251 Identities=24% Similarity=0.372 Sum_probs=202.7
Q ss_pred cccccccccccceeEEEEEecCCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCCCCccccceE
Q 011360 194 FASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQIRHRNILPLLAH 273 (487)
Q Consensus 194 ~~~~~~lg~G~~g~v~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~ 273 (487)
|.+.+.||.|++|.||++.. ..++..|++|.+.. ..........+.+|+.+++.++||||++++++
T Consensus 2 ~~~~~~l~~g~~~~v~~~~~-~~~~~~~~~k~~~~-------------~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~ 67 (256)
T cd08529 2 FEILNKIGKGSFGVVFKVVR-KADKRVYAMKQIDL-------------SKMNRREREEAIDEARVLAKLDSSYIIRYYES 67 (256)
T ss_pred ceEeEEecCCCCeEEEEEEE-cCCCcEEEEEEeeh-------------hhCCHHHHHHHHHHHHHHHhcCCCCeehheee
Confidence 77888999999999999975 45789999998732 11223345678889999999999999999999
Q ss_pred EecCCeeEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCCEEE
Q 011360 274 MVRPDCHLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVLLNDDMEACI 353 (487)
Q Consensus 274 ~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nill~~~~~~kl 353 (487)
+...+..|+||||+++++|.+++... ....+++..+..++.|++.||.|| |+.|++|+||+|+||+++.++.++|
T Consensus 68 ~~~~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~i~~~l~~al~~l---H~~~i~h~dl~~~nili~~~~~~~l 142 (256)
T cd08529 68 FLDKGKLNIVMEYAENGDLHKLLKMQ--RGRPLPEDQVWRFFIQILLGLAHL---HSKKILHRDIKSLNLFLDAYDNVKI 142 (256)
T ss_pred eccCCEEEEEEEeCCCCcHHHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHH---HHCCcccCCCCcceEEEeCCCCEEE
Confidence 99999999999999999999999752 345788999999999999999999 6788999999999999999999999
Q ss_pred eccCCccccCCCCceeeEeeecccccccCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCccccCCCCccccHHHHHHHH
Q 011360 354 SDLGLAMAIPDGYTRVLISYVLGTMAYIAPEYFQQPELSEKCDIFSFGMLLISLVRGVPSFVFHQNGEEICSPEWLRKVM 433 (487)
Q Consensus 354 ~DFg~s~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DvwslG~~l~elltg~~pf~~~~~~~~~~~~~~~~~~~ 433 (487)
+|||++......... .....|++.|+|||++.+..++.++|+||||+++|+|++|..||.... .........
T Consensus 143 ~df~~~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~------~~~~~~~~~ 214 (256)
T cd08529 143 GDLGVAKLLSDNTNF--ANTIVGTPYYLSPELCEDKPYNEKSDVWALGVVLYECCTGKHPFDANN------QGALILKII 214 (256)
T ss_pred cccccceeccCccch--hhccccCccccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCC------HHHHHHHHH
Confidence 999998766543221 123458899999999998889999999999999999999999994332 112222222
Q ss_pred hcCCCCCccCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCChHHHHH
Q 011360 434 NSKNPSRAIDPRLPGNGYEKKMLHVLKIAYICTLHDPEERPNSQYVRC 481 (487)
Q Consensus 434 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~~il~ 481 (487)
....+ .++. .....+.+++.+||+.+|++||++.+++.
T Consensus 215 ~~~~~------~~~~----~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~ 252 (256)
T cd08529 215 RGVFP------PVSQ----MYSQQLAQLIDQCLTKDYRQRPDTFQLLR 252 (256)
T ss_pred cCCCC------CCcc----ccCHHHHHHHHHHccCCcccCcCHHHHhh
Confidence 22111 1111 23356899999999999999999999875
No 144
>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found
Probab=100.00 E-value=2.8e-39 Score=323.38 Aligned_cols=255 Identities=21% Similarity=0.313 Sum_probs=197.6
Q ss_pred cccccccccccccceeEEEEEecCCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCCCCccccc
Q 011360 192 DCFASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQIRHRNILPLL 271 (487)
Q Consensus 192 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~ 271 (487)
++|.+.+.||.|+||.||++.. ..+++.+|+|.+... ..........+.+|+.+++.++||||++++
T Consensus 43 ~~y~~~~~lG~G~fg~Vy~~~~-~~~~~~~aiK~~~~~------------~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~ 109 (370)
T cd05621 43 EDYDVVKVIGRGAFGEVQLVRH-KSSQKVYAMKLLSKF------------EMIKRSDSAFFWEERDIMAFANSPWVVQLF 109 (370)
T ss_pred HHCeEEEEEEecCCeEEEEEEE-CCCCCEEEEEEEEHH------------HhhhhhhHHHHHHHHHHHHhCCCCCEeeEE
Confidence 4699999999999999999975 457889999987320 111222345677899999999999999999
Q ss_pred eEEecCCeeEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCCE
Q 011360 272 AHMVRPDCHLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVLLNDDMEA 351 (487)
Q Consensus 272 ~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nill~~~~~~ 351 (487)
+++.+++..|+|||||++|+|.+++.. ..+++..+..++.|++.||.|| |++||+||||||+|||++.++.+
T Consensus 110 ~~~~~~~~~~lv~Ey~~gg~L~~~l~~-----~~~~~~~~~~~~~qil~aL~~L---H~~~IvHrDLKp~NILl~~~~~~ 181 (370)
T cd05621 110 CAFQDDKYLYMVMEYMPGGDLVNLMSN-----YDVPEKWAKFYTAEVVLALDAI---HSMGLIHRDVKPDNMLLDKHGHL 181 (370)
T ss_pred EEEEcCCEEEEEEcCCCCCcHHHHHHh-----cCCCHHHHHHHHHHHHHHHHHH---HHCCeEecCCCHHHEEECCCCCE
Confidence 999999999999999999999999864 3578889999999999999999 67889999999999999999999
Q ss_pred EEeccCCccccCCCCceeeEeeecccccccCCcccCCC----CCCchhHHHHHHHHHHHHHhCCCCccccCCCCccccHH
Q 011360 352 CISDLGLAMAIPDGYTRVLISYVLGTMAYIAPEYFQQP----ELSEKCDIFSFGMLLISLVRGVPSFVFHQNGEEICSPE 427 (487)
Q Consensus 352 kl~DFg~s~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~----~~~~~~DvwslG~~l~elltg~~pf~~~~~~~~~~~~~ 427 (487)
||+|||++........ .......||+.|+|||++.+. .++.++|||||||++|+|++|..||..... ..
T Consensus 182 kL~DFG~a~~~~~~~~-~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~~DiwSlG~ilyell~G~~Pf~~~~~------~~ 254 (370)
T cd05621 182 KLADFGTCMKMDETGM-VRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADSL------VG 254 (370)
T ss_pred EEEecccceecccCCc-eecccCCCCcccCCHHHHhccCCCCCCCcccCEEeehHHHHHHHhCCCCCCCCCH------HH
Confidence 9999999987643221 112345699999999998753 378899999999999999999999954321 22
Q ss_pred HHHHHHhcCCCCCccCCCCCCCCcHHHHHHHHHHHhhccCCCCCC--CCChHHHHH
Q 011360 428 WLRKVMNSKNPSRAIDPRLPGNGYEKKMLHVLKIAYICTLHDPEE--RPNSQYVRC 481 (487)
Q Consensus 428 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~--RPs~~~il~ 481 (487)
........... .. ++. ....+..+.+++..||..+|.+ |||+.++++
T Consensus 255 ~~~~i~~~~~~-~~----~p~--~~~~s~~~~~li~~~L~~~~~r~~R~~~~e~l~ 303 (370)
T cd05621 255 TYSKIMDHKNS-LN----FPE--DVEISKHAKNLICAFLTDREVRLGRNGVEEIKQ 303 (370)
T ss_pred HHHHHHhCCcc-cC----CCC--cccCCHHHHHHHHHHccCchhccCCCCHHHHhc
Confidence 23333322111 11 111 1123356788889999865544 889999875
No 145
>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp
Probab=100.00 E-value=1.1e-38 Score=316.47 Aligned_cols=266 Identities=24% Similarity=0.346 Sum_probs=201.8
Q ss_pred hccccccccccccccceeEEEEEe----cCCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccC-CC
Q 011360 190 KEDCFASLEKIGSGGCGEVYKAEL----PGSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQI-RH 264 (487)
Q Consensus 190 ~~~~~~~~~~lg~G~~g~v~~~~~----~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h 264 (487)
..++|.+.+.||.|+||.||+|.+ ...+++.||||.+... ........+.+|+.++.++ +|
T Consensus 5 ~~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~--------------~~~~~~~~~~~E~~~l~~l~~h 70 (343)
T cd05103 5 PRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEG--------------ATHSEHRALMSELKILIHIGHH 70 (343)
T ss_pred chhHhcccccccCCccceEEEEeeccCCccccceeEEEEEeccC--------------CChHHHHHHHHHHHHHHhccCC
Confidence 345799999999999999999974 2346789999987321 1122345678899999999 78
Q ss_pred CCccccceEEecC-CeeEEEEEecCCCCHHHHHhhhhc------------------------------------------
Q 011360 265 RNILPLLAHMVRP-DCHLLVYEFMKNGSLQDILDDVSR------------------------------------------ 301 (487)
Q Consensus 265 pnIv~l~~~~~~~-~~~~lv~E~~~~gsL~~~l~~~~~------------------------------------------ 301 (487)
|||+++++++... ...+++||||++|+|.+++.....
T Consensus 71 ~niv~~~~~~~~~~~~~~lv~ey~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (343)
T cd05103 71 LNVVNLLGACTKPGGPLMVIVEFCKFGNLSNYLRSKRGEFVPYKTKDARFRQGKSGYGDISEDLKRRLDSITSSQSSASS 150 (343)
T ss_pred ccHhhhcceeecCCCceEEEEeccCCCcHHHHHHhcCCccccccccccccccccccccchhhhhhhhccccccccccccc
Confidence 9999999987654 567899999999999999864210
Q ss_pred ---------------------CCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCCEEEeccCCcc
Q 011360 302 ---------------------GRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVLLNDDMEACISDLGLAM 360 (487)
Q Consensus 302 ---------------------~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nill~~~~~~kl~DFg~s~ 360 (487)
....+++..+..++.|++.||+|| |++||+||||||+||+++.++.+||+|||++.
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~l---H~~~i~H~dikp~Nil~~~~~~~kl~dfg~~~ 227 (343)
T cd05103 151 GFVEEKSLSDVEEEEAEQEDLYKKVLTLEDLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSENNVVKICDFGLAR 227 (343)
T ss_pred cccCCCccccchhhhhhhhhhhhccCCHHHHHHHHHHHHHHHHHH---HhCCeecCCCccCeEEEcCCCcEEEEeccccc
Confidence 012467888899999999999999 77899999999999999999999999999987
Q ss_pred ccCCCCceeeEeeecccccccCCcccCCCCCCchhHHHHHHHHHHHHHh-CCCCccccCCCCccccHHHHHHHHhcCCCC
Q 011360 361 AIPDGYTRVLISYVLGTMAYIAPEYFQQPELSEKCDIFSFGMLLISLVR-GVPSFVFHQNGEEICSPEWLRKVMNSKNPS 439 (487)
Q Consensus 361 ~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DvwslG~~l~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 439 (487)
...............+++.|+|||.+.+..++.++||||||+++|+|++ |..||...... .. ...........
T Consensus 228 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~-----~~-~~~~~~~~~~~ 301 (343)
T cd05103 228 DIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKID-----EE-FCRRLKEGTRM 301 (343)
T ss_pred ccccCcchhhcCCCCCCcceECcHHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCcccc-----HH-HHHHHhccCCC
Confidence 6533222111122345678999999988899999999999999999997 89998543221 11 12222221111
Q ss_pred CccCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCChHHHHHHHhhhC
Q 011360 440 RAIDPRLPGNGYEKKMLHVLKIAYICTLHDPEERPNSQYVRCRLSQLL 487 (487)
Q Consensus 440 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~~il~~L~~ll 487 (487)
..+.. ....+.+++.+||+.+|++|||+.+|++.|+.++
T Consensus 302 -----~~~~~----~~~~~~~~~~~cl~~~p~~Rps~~eil~~l~~~~ 340 (343)
T cd05103 302 -----RAPDY----TTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLL 340 (343)
T ss_pred -----CCCCC----CCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence 11111 1245889999999999999999999999998764
No 146
>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and
Probab=100.00 E-value=4.7e-39 Score=316.57 Aligned_cols=245 Identities=24% Similarity=0.293 Sum_probs=192.9
Q ss_pred ccccccccccccceeEEEEEecCCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccC-CCCCccccc
Q 011360 193 CFASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQI-RHRNILPLL 271 (487)
Q Consensus 193 ~~~~~~~lg~G~~g~v~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpnIv~l~ 271 (487)
+|.+.+.||+|+||.||+|.. ..++..||+|.+... ..........+..|..++..+ .||+|++++
T Consensus 1 df~~~~~lg~G~~g~Vy~~~~-~~~~~~~aiK~~~~~------------~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~ 67 (323)
T cd05616 1 DFNFLMVLGKGSFGKVMLAER-KGTDELYAIKILKKD------------VVIQDDDVECTMVEKRVLALSGKPPFLTQLH 67 (323)
T ss_pred CceEEEEEeeCCCeEEEEEEE-CCCCCEEEEEEEEHH------------HhhhhhHHHHHHHHHHHHHhccCCCeEeeEE
Confidence 378889999999999999975 457889999988421 111222344566677777766 689999999
Q ss_pred eEEecCCeeEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCCE
Q 011360 272 AHMVRPDCHLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVLLNDDMEA 351 (487)
Q Consensus 272 ~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nill~~~~~~ 351 (487)
+++...+.+|+||||+++|+|.+++.. ...+++..+..++.|++.||.|| |++||+||||||+|||++.++.+
T Consensus 68 ~~~~~~~~~~lv~E~~~~g~L~~~~~~----~~~~~~~~~~~~~~qi~~aL~~L---H~~~ivHrDlkp~Nill~~~~~~ 140 (323)
T cd05616 68 SCFQTMDRLYFVMEYVNGGDLMYQIQQ----VGRFKEPHAVFYAAEIAIGLFFL---HSKGIIYRDLKLDNVMLDSEGHI 140 (323)
T ss_pred EEEecCCEEEEEEcCCCCCCHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHH---HHCCEEecCCCHHHeEECCCCcE
Confidence 999999999999999999999998864 35688999999999999999999 67789999999999999999999
Q ss_pred EEeccCCccccCCCCceeeEeeecccccccCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCccccCCCCccccHHHHHH
Q 011360 352 CISDLGLAMAIPDGYTRVLISYVLGTMAYIAPEYFQQPELSEKCDIFSFGMLLISLVRGVPSFVFHQNGEEICSPEWLRK 431 (487)
Q Consensus 352 kl~DFg~s~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DvwslG~~l~elltg~~pf~~~~~~~~~~~~~~~~~ 431 (487)
||+|||++........ ......||+.|+|||++.+..++.++|||||||++|||+||..||..... ......
T Consensus 141 kL~DfG~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~Pf~~~~~------~~~~~~ 212 (323)
T cd05616 141 KIADFGMCKENMWDGV--TTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDE------DELFQS 212 (323)
T ss_pred EEccCCCceecCCCCC--ccccCCCChhhcCHHHhcCCCCCCccchhchhHHHHHHHhCCCCCCCCCH------HHHHHH
Confidence 9999999875432211 12345689999999999999999999999999999999999999943321 222222
Q ss_pred HHhcCCCCCccCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCCh
Q 011360 432 VMNSKNPSRAIDPRLPGNGYEKKMLHVLKIAYICTLHDPEERPNS 476 (487)
Q Consensus 432 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~ 476 (487)
+.. ... . +|. ..+.++.+++.+||+.+|++|++.
T Consensus 213 i~~-~~~--~----~p~----~~s~~~~~li~~~l~~~p~~R~~~ 246 (323)
T cd05616 213 IME-HNV--A----YPK----SMSKEAVAICKGLMTKHPGKRLGC 246 (323)
T ss_pred HHh-CCC--C----CCC----cCCHHHHHHHHHHcccCHHhcCCC
Confidence 222 111 1 111 123568899999999999999985
No 147
>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr
Probab=100.00 E-value=8.5e-39 Score=307.81 Aligned_cols=249 Identities=27% Similarity=0.370 Sum_probs=192.2
Q ss_pred cccccceeEEEEEecCCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCCCCccccceEEecCCe
Q 011360 200 IGSGGCGEVYKAELPGSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQIRHRNILPLLAHMVRPDC 279 (487)
Q Consensus 200 lg~G~~g~v~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~ 279 (487)
||.|+||.||++... .+|+.||+|.+.. ...........+..|+.++..++||||+++++++..+..
T Consensus 1 lg~G~~g~Vy~~~~~-~~~~~~a~K~~~~------------~~~~~~~~~~~~~~E~~il~~l~hp~i~~~~~~~~~~~~ 67 (277)
T cd05607 1 LGKGGFGEVCAVQVK-NTGKMYACKKLDK------------KRLKKKSGEKMALLEKEILEKVNSPFIVNLAYAFESKTH 67 (277)
T ss_pred CCCCCceEEEEEEEc-cCCcEEEEEEEcH------------HHhhcchhhHHHHHHHHHHHhcCCCcEEEEEEEEecCCe
Confidence 699999999999754 5789999998732 001111223345669999999999999999999999999
Q ss_pred eEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCCEEEeccCCc
Q 011360 280 HLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVLLNDDMEACISDLGLA 359 (487)
Q Consensus 280 ~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nill~~~~~~kl~DFg~s 359 (487)
.|+||||++|++|.+++.. .....+++..+..++.|++.||+|| |+.|++||||||+||+++.++.++|+|||++
T Consensus 68 ~~lv~e~~~g~~L~~~~~~--~~~~~~~~~~~~~~~~qi~~al~~l---H~~~ivH~dikp~Nili~~~~~~~l~Dfg~~ 142 (277)
T cd05607 68 LCLVMSLMNGGDLKYHIYN--VGERGLEMERVIHYSAQITCGILHL---HSMDIVYRDMKPENVLLDDQGNCRLSDLGLA 142 (277)
T ss_pred EEEEEecCCCCCHHHHHHh--ccccCCCHHHHHHHHHHHHHHHHHH---HHCCEEEccCChHhEEEcCCCCEEEeeceee
Confidence 9999999999999988854 2345688899999999999999999 7789999999999999999999999999998
Q ss_pred cccCCCCceeeEeeecccccccCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCccccCCCCccccHHHHHHHHhcCCCC
Q 011360 360 MAIPDGYTRVLISYVLGTMAYIAPEYFQQPELSEKCDIFSFGMLLISLVRGVPSFVFHQNGEEICSPEWLRKVMNSKNPS 439 (487)
Q Consensus 360 ~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DvwslG~~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 439 (487)
........ .....|++.|+|||++.+..++.++|||||||++|+|++|..||....... ...+........ ..
T Consensus 143 ~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~el~~g~~p~~~~~~~~--~~~~~~~~~~~~-~~- 215 (277)
T cd05607 143 VELKDGKT---ITQRAGTNGYMAPEILKEEPYSYPVDWFAMGCSIYEMVAGRTPFKDHKEKV--AKEELKRRTLED-EV- 215 (277)
T ss_pred eecCCCce---eeccCCCCCccCHHHHccCCCCCchhHHHHHHHHHHHHhCCCCCCCCcchh--hHHHHHHHhhcc-cc-
Confidence 76644322 123468999999999998889999999999999999999999995432211 111111211111 11
Q ss_pred CccCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCChHHHHH
Q 011360 440 RAIDPRLPGNGYEKKMLHVLKIAYICTLHDPEERPNSQYVRC 481 (487)
Q Consensus 440 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~~il~ 481 (487)
. .+ ....+.++.+++.+||+.||++||+++++++
T Consensus 216 ---~--~~---~~~~~~~~~~li~~~L~~~P~~R~~~~~~~~ 249 (277)
T cd05607 216 ---K--FE---HQNFTEESKDICRLFLAKKPEDRLGSREKND 249 (277)
T ss_pred ---c--cc---cccCCHHHHHHHHHHhccCHhhCCCCccchh
Confidence 0 00 0123356889999999999999999976654
No 148
>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk. Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr
Probab=100.00 E-value=1.5e-38 Score=303.16 Aligned_cols=256 Identities=24% Similarity=0.381 Sum_probs=201.5
Q ss_pred hccccccccccccccceeEEEEEecCCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCCCCccc
Q 011360 190 KEDCFASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQIRHRNILP 269 (487)
Q Consensus 190 ~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~ 269 (487)
..+.|.+.+.||.|+||.||+|... ++..||+|.+... ......+.+|+.+++.++||||++
T Consensus 4 ~~~~~~~~~~ig~G~~g~v~~~~~~--~~~~~a~K~~~~~----------------~~~~~~~~~E~~~l~~l~h~~i~~ 65 (260)
T cd05067 4 PRETLKLVKKLGAGQFGEVWMGYYN--GHTKVAIKSLKQG----------------SMSPEAFLAEANLMKQLQHPRLVR 65 (260)
T ss_pred chHHceeeeeeccCccceEEeeecC--CCceEEEEEecCC----------------CCcHHHHHHHHHHHHhcCCcCeee
Confidence 3456999999999999999999753 6788999987321 112346788999999999999999
Q ss_pred cceEEecCCeeEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCC
Q 011360 270 LLAHMVRPDCHLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVLLNDDM 349 (487)
Q Consensus 270 l~~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nill~~~~ 349 (487)
+++++. .+..+++|||+.+++|.+++.. ..+..+++..+..++.|++.||+|| |+.|++||||+|+||+++.++
T Consensus 66 ~~~~~~-~~~~~~v~e~~~~~~L~~~~~~--~~~~~~~~~~~~~i~~~i~~al~~L---H~~~i~H~dl~p~ni~i~~~~ 139 (260)
T cd05067 66 LYAVVT-QEPIYIITEYMENGSLVDFLKT--PEGIKLTINKLIDMAAQIAEGMAFI---ERKNYIHRDLRAANILVSETL 139 (260)
T ss_pred EEEEEc-cCCcEEEEEcCCCCCHHHHHHh--cCCCCCCHHHHHHHHHHHHHHHHHH---hcCCeecccccHHhEEEcCCC
Confidence 999864 5678999999999999999864 3345788999999999999999999 778899999999999999999
Q ss_pred CEEEeccCCccccCCCCceeeEeeecccccccCCcccCCCCCCchhHHHHHHHHHHHHHh-CCCCccccCCCCccccHHH
Q 011360 350 EACISDLGLAMAIPDGYTRVLISYVLGTMAYIAPEYFQQPELSEKCDIFSFGMLLISLVR-GVPSFVFHQNGEEICSPEW 428 (487)
Q Consensus 350 ~~kl~DFg~s~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DvwslG~~l~ellt-g~~pf~~~~~~~~~~~~~~ 428 (487)
.++|+|||++.......... .....++..|+|||++.+..++.++||||||+++|++++ |.+||.... ..+.
T Consensus 140 ~~~l~dfg~~~~~~~~~~~~-~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~------~~~~ 212 (260)
T cd05067 140 CCKIADFGLARLIEDNEYTA-REGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTYGRIPYPGMT------NPEV 212 (260)
T ss_pred CEEEccCcceeecCCCCccc-ccCCcccccccCHHHhccCCcCcccchHHHHHHHHHHHhCCCCCCCCCC------hHHH
Confidence 99999999987665322111 122345678999999998889999999999999999999 999995332 1222
Q ss_pred HHHHHhcCCCCCccCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCChHHHHHHHhhh
Q 011360 429 LRKVMNSKNPSRAIDPRLPGNGYEKKMLHVLKIAYICTLHDPEERPNSQYVRCRLSQL 486 (487)
Q Consensus 429 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~~il~~L~~l 486 (487)
...+. ..... . .+. ..+.++.+++.+||..+|++|||++++...|+.+
T Consensus 213 ~~~~~-~~~~~-~----~~~----~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~~ 260 (260)
T cd05067 213 IQNLE-RGYRM-P----RPD----NCPEELYELMRLCWKEKPEERPTFEYLRSVLEDF 260 (260)
T ss_pred HHHHH-cCCCC-C----CCC----CCCHHHHHHHHHHccCChhhCCCHHHHHHHhhcC
Confidence 22222 11111 1 111 1235699999999999999999999999999864
No 149
>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke
Probab=100.00 E-value=1.9e-38 Score=308.30 Aligned_cols=265 Identities=20% Similarity=0.294 Sum_probs=202.9
Q ss_pred cccccccccccccceeEEEEEecCC---------------CCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHH
Q 011360 192 DCFASLEKIGSGGCGEVYKAELPGS---------------NGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEI 256 (487)
Q Consensus 192 ~~~~~~~~lg~G~~g~v~~~~~~~~---------------~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~ 256 (487)
++|.+.+.||+|+||.||++..... .+..||+|.+.. .........+.+|+
T Consensus 5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~--------------~~~~~~~~~~~~e~ 70 (296)
T cd05051 5 QPLNFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRP--------------DASDNAREDFLKEV 70 (296)
T ss_pred hhCcccccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecC--------------ccCHHHHHHHHHHH
Confidence 4689999999999999999975422 224689998732 11123456788999
Q ss_pred HHhccCCCCCccccceEEecCCeeEEEEEecCCCCHHHHHhhhhc-------CCCCCChHHHHHHHHHHHHHHHHHHhcC
Q 011360 257 ITASQIRHRNILPLLAHMVRPDCHLLVYEFMKNGSLQDILDDVSR-------GRRELDWPSRHRIALGVASGLEYLHMYH 329 (487)
Q Consensus 257 ~~l~~l~hpnIv~l~~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~-------~~~~l~~~~~~~i~~qi~~~L~~Lh~~h 329 (487)
.++.+++||||+++++++..++..+++|||+++++|.+++..... ....+++..++.++.|++.||.|| |
T Consensus 71 ~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~L---H 147 (296)
T cd05051 71 KILSRLSDPNIARLLGVCTVDPPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYL---E 147 (296)
T ss_pred HHHHhcCCCCEeEEEEEEecCCCcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHH---H
Confidence 999999999999999999999999999999999999999975321 123689999999999999999999 6
Q ss_pred CCCeeecCCCCCCEEeCCCCCEEEeccCCccccCCCCceeeEeeecccccccCCcccCCCCCCchhHHHHHHHHHHHHHh
Q 011360 330 SASIIHGDIKPRNVLLNDDMEACISDLGLAMAIPDGYTRVLISYVLGTMAYIAPEYFQQPELSEKCDIFSFGMLLISLVR 409 (487)
Q Consensus 330 ~~givH~Dlkp~Nill~~~~~~kl~DFg~s~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DvwslG~~l~ellt 409 (487)
+.|++||||||+||+++.++.++|+|||++................+++.|+|||.+.+..++.++||||||+++|+|++
T Consensus 148 ~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~ 227 (296)
T cd05051 148 SLNFVHRDLATRNCLVGKNYTIKIADFGMSRNLYSSDYYRVQGRAPLPIRWMAWESVLLGKFTTKSDVWAFGVTLWEILT 227 (296)
T ss_pred HcCccccccchhceeecCCCceEEccccceeecccCcceeecCcCCCCceecCHHHhhcCCCCccchhhhhHHHHHHHHh
Confidence 77899999999999999999999999999876544332222233456788999999988889999999999999999998
Q ss_pred --CCCCccccCCCCccccHHHHHHHHhc---CCCCCccCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCChHHHHHHHh
Q 011360 410 --GVPSFVFHQNGEEICSPEWLRKVMNS---KNPSRAIDPRLPGNGYEKKMLHVLKIAYICTLHDPEERPNSQYVRCRLS 484 (487)
Q Consensus 410 --g~~pf~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~~il~~L~ 484 (487)
|..||..... ...+...... .......+ . ....+.++.+++.+||+.+|++|||+.+|++.|+
T Consensus 228 ~~~~~p~~~~~~------~~~~~~~~~~~~~~~~~~~~~--~----~~~~~~~l~~li~~cl~~~p~~Rpt~~el~~~L~ 295 (296)
T cd05051 228 LCREQPYEHLTD------QQVIENAGHFFRDDGRQIYLP--R----PPNCPKDIYELMLECWRRDEEDRPTFREIHLFLQ 295 (296)
T ss_pred cCCCCCCCCcCh------HHHHHHHHhccccccccccCC--C----ccCCCHHHHHHHHHHhccChhcCCCHHHHHHHhc
Confidence 5777743221 1111111111 11111000 0 1122356899999999999999999999999886
Q ss_pred h
Q 011360 485 Q 485 (487)
Q Consensus 485 ~ 485 (487)
+
T Consensus 296 ~ 296 (296)
T cd05051 296 R 296 (296)
T ss_pred C
Confidence 3
No 150
>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign
Probab=100.00 E-value=3.8e-39 Score=311.16 Aligned_cols=262 Identities=24% Similarity=0.298 Sum_probs=198.1
Q ss_pred cccccccccccceeEEEEEec---CCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCCCCcccc
Q 011360 194 FASLEKIGSGGCGEVYKAELP---GSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQIRHRNILPL 270 (487)
Q Consensus 194 ~~~~~~lg~G~~g~v~~~~~~---~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l 270 (487)
|.+.+.||.|+||+||++.++ ..++..||+|.+... ........+.+|+.+++.++||||+++
T Consensus 6 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~--------------~~~~~~~~~~~E~~~l~~l~h~~i~~~ 71 (283)
T cd05080 6 LKKIRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRE--------------CGQQNTSGWKKEINILKTLYHENIVKY 71 (283)
T ss_pred ceeceecccCCCcEEEEeeEccccCCCCceEEEEEeccc--------------cChHHHHHHHHHHHHHHhCCCCCEeeE
Confidence 388899999999999987642 346788999987321 111234567789999999999999999
Q ss_pred ceEEecC--CeeEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCC
Q 011360 271 LAHMVRP--DCHLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVLLNDD 348 (487)
Q Consensus 271 ~~~~~~~--~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nill~~~ 348 (487)
++++... ...+++|||+++++|.+++.. ..+++..+..++.|++.||.|| |++|++||||||+||+++.+
T Consensus 72 ~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~-----~~l~~~~~~~i~~~l~~~l~~l---H~~~i~H~dlkp~Nili~~~ 143 (283)
T cd05080 72 KGCCSEQGGKGLQLIMEYVPLGSLRDYLPK-----HKLNLAQLLLFAQQICEGMAYL---HSQHYIHRDLAARNVLLDND 143 (283)
T ss_pred EEEEecCCCceEEEEecCCCCCCHHHHHHH-----cCCCHHHHHHHHHHHHHHHHHH---HHCCeeccccChheEEEcCC
Confidence 9987653 467899999999999999864 3589999999999999999999 67789999999999999999
Q ss_pred CCEEEeccCCccccCCCCceee-EeeecccccccCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCccccCCCCc-----
Q 011360 349 MEACISDLGLAMAIPDGYTRVL-ISYVLGTMAYIAPEYFQQPELSEKCDIFSFGMLLISLVRGVPSFVFHQNGEE----- 422 (487)
Q Consensus 349 ~~~kl~DFg~s~~~~~~~~~~~-~~~~~gt~~y~aPE~l~~~~~~~~~DvwslG~~l~elltg~~pf~~~~~~~~----- 422 (487)
+.++|+|||++........... .....++..|+|||.+.+..++.++||||||+++|+|+||..||........
T Consensus 144 ~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~ 223 (283)
T cd05080 144 RLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAVECLKENKFSYASDVWSFGVTLYELLTHCDSKQSPPKKFEEMIGP 223 (283)
T ss_pred CcEEEeecccccccCCcchhhccCCCCCCCceeeCHhHhcccCCCcccccHHHHHHHHHHHhCCCCCCCCcchhhhhhcc
Confidence 9999999999987654322111 1122356779999999888899999999999999999999999854321100
Q ss_pred ---cccHHHHHHHHhcCCCCCccCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCChHHHHHHHhhh
Q 011360 423 ---ICSPEWLRKVMNSKNPSRAIDPRLPGNGYEKKMLHVLKIAYICTLHDPEERPNSQYVRCRLSQL 486 (487)
Q Consensus 423 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~~il~~L~~l 486 (487)
............... ....+ ...+..+.+++.+||+.+|++|||+++|++.|+.+
T Consensus 224 ~~~~~~~~~~~~~~~~~~-----~~~~~----~~~~~~~~~li~~cl~~~p~~Rps~~~i~~~l~~~ 281 (283)
T cd05080 224 KQGQMTVVRLIELLERGM-----RLPCP----KNCPQEVYILMKNCWETEAKFRPTFRSLIPILKEM 281 (283)
T ss_pred cccccchhhhhhhhhcCC-----CCCCC----CCCCHHHHHHHHHHhccChhhCCCHHHHHHHHHHh
Confidence 000000111111000 00011 12335689999999999999999999999999876
No 151
>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t
Probab=100.00 E-value=1.9e-38 Score=302.62 Aligned_cols=258 Identities=19% Similarity=0.293 Sum_probs=201.4
Q ss_pred cccccccccccccceeEEEEEecCCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCCCCccccc
Q 011360 192 DCFASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQIRHRNILPLL 271 (487)
Q Consensus 192 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~ 271 (487)
+.|.+.+.||.|++|.||.+.. ..++..||+|.+...... .........+.+|+.++++++||||++++
T Consensus 2 ~~~~~~~~lg~g~~~~vy~~~~-~~~~~~~~lk~~~~~~~~----------~~~~~~~~~~~~e~~~l~~l~~~~i~~~~ 70 (263)
T cd06625 2 TNWRRGKLLGQGAFGRVYLCYD-VDTGRELAVKQVPFDPDS----------PETKKEVNALECEIQLLKNLQHERIVQYY 70 (263)
T ss_pred CcccccceecCCCceEEEEEEE-cCCCcEEEEEEEeecccc----------hhhHHHHHHHHHHHHHHHhCCCCCeeeeE
Confidence 3588899999999999999964 467899999987432110 11122345678899999999999999999
Q ss_pred eEEecCCeeEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCCE
Q 011360 272 AHMVRPDCHLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVLLNDDMEA 351 (487)
Q Consensus 272 ~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nill~~~~~~ 351 (487)
+++...+..+++|||+++++|.+++.. ...++...+..++.|++.||.|| |+.|++||||+|+||+++.++.+
T Consensus 71 ~~~~~~~~~~~v~e~~~~~~l~~~~~~----~~~~~~~~~~~~~~~l~~~l~~l---H~~~i~H~dl~p~nilv~~~~~~ 143 (263)
T cd06625 71 GCLRDDETLSIFMEYMPGGSVKDQLKA----YGALTETVTRKYTRQILEGVEYL---HSNMIVHRDIKGANILRDSAGNV 143 (263)
T ss_pred EEEccCCeEEEEEEECCCCcHHHHHHH----hCCCCHHHHHHHHHHHHHHHHHH---HhCCeecCCCCHHHEEEcCCCCE
Confidence 999999999999999999999999875 35688899999999999999999 77889999999999999999999
Q ss_pred EEeccCCccccCCCCceee-EeeecccccccCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCccccCCCCccccHHHHH
Q 011360 352 CISDLGLAMAIPDGYTRVL-ISYVLGTMAYIAPEYFQQPELSEKCDIFSFGMLLISLVRGVPSFVFHQNGEEICSPEWLR 430 (487)
Q Consensus 352 kl~DFg~s~~~~~~~~~~~-~~~~~gt~~y~aPE~l~~~~~~~~~DvwslG~~l~elltg~~pf~~~~~~~~~~~~~~~~ 430 (487)
+|+|||++........... .....++..|+|||.+.+..++.++||||||+++|+|++|+.||..... .....
T Consensus 144 ~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~------~~~~~ 217 (263)
T cd06625 144 KLGDFGASKRLQTICSSGTGMKSVTGTPYWMSPEVISGEGYGRKADVWSVGCTVVEMLTEKPPWAEFEA------MAAIF 217 (263)
T ss_pred EEeecccceeccccccccccccCCCcCccccCcceeccCCCCchhhhHHHHHHHHHHHhCCCCccccch------HHHHH
Confidence 9999999876533211111 0234578899999999998899999999999999999999999943211 11112
Q ss_pred HHHhcCCCCCccCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCChHHHHHH
Q 011360 431 KVMNSKNPSRAIDPRLPGNGYEKKMLHVLKIAYICTLHDPEERPNSQYVRCR 482 (487)
Q Consensus 431 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~~il~~ 482 (487)
...... ....++. .....+.+++.+||..+|++|||+.+++..
T Consensus 218 ~~~~~~-~~~~~~~--------~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~ 260 (263)
T cd06625 218 KIATQP-TNPQLPS--------HVSPDARNFLRRTFVENAKKRPSAEELLRH 260 (263)
T ss_pred HHhccC-CCCCCCc--------cCCHHHHHHHHHHhhcCcccCCCHHHHhhC
Confidence 221111 1111111 123458899999999999999999999863
No 152
>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk. Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r
Probab=100.00 E-value=8.2e-39 Score=304.88 Aligned_cols=255 Identities=27% Similarity=0.410 Sum_probs=199.3
Q ss_pred ccccccccccccccceeEEEEEecCCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCCCCcccc
Q 011360 191 EDCFASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQIRHRNILPL 270 (487)
Q Consensus 191 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l 270 (487)
.++|.+.+.||.|+||.||+|... ++..+|+|.+... ......+.+|+.++++++||||+++
T Consensus 5 ~~~~~~~~~ig~g~~~~v~~~~~~--~~~~~~~k~~~~~----------------~~~~~~~~~E~~~l~~l~~~~i~~~ 66 (260)
T cd05070 5 RESLQLIKKLGNGQFGEVWMGTWN--GNTKVAVKTLKPG----------------TMSPESFLEEAQIMKKLRHDKLVQL 66 (260)
T ss_pred hHHhhhhheeccccCceEEEEEec--CCceeEEEEecCC----------------CCCHHHHHHHHHHHHhcCCCceEEE
Confidence 456999999999999999999754 5667999987321 0112357889999999999999999
Q ss_pred ceEEecCCeeEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCC
Q 011360 271 LAHMVRPDCHLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVLLNDDME 350 (487)
Q Consensus 271 ~~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nill~~~~~ 350 (487)
++++. ....+++|||+++++|.+++.. .....+++..+..++.|++.||.|| |++|++||||+|+||++++++.
T Consensus 67 ~~~~~-~~~~~lv~e~~~~~~L~~~~~~--~~~~~~~~~~~~~~~~~l~~al~~l---H~~~i~H~di~p~Nili~~~~~ 140 (260)
T cd05070 67 YAVVS-EEPIYIVTEYMSKGSLLDFLKD--GEGRALKLPNLVDMAAQVAAGMAYI---ERMNYIHRDLRSANILVGDGLV 140 (260)
T ss_pred EeEEC-CCCcEEEEEecCCCcHHHHHHh--cCCCCCCHHHHHHHHHHHHHHHHHH---HHCCcccCCCccceEEEeCCce
Confidence 99875 4568999999999999999864 2345689999999999999999999 6678999999999999999999
Q ss_pred EEEeccCCccccCCCCceeeEeeecccccccCCcccCCCCCCchhHHHHHHHHHHHHHh-CCCCccccCCCCccccHHHH
Q 011360 351 ACISDLGLAMAIPDGYTRVLISYVLGTMAYIAPEYFQQPELSEKCDIFSFGMLLISLVR-GVPSFVFHQNGEEICSPEWL 429 (487)
Q Consensus 351 ~kl~DFg~s~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DvwslG~~l~ellt-g~~pf~~~~~~~~~~~~~~~ 429 (487)
++|+|||++.......... .....++..|+|||.+.+..++.++|+||||+++|+|++ |.+||.... ..+..
T Consensus 141 ~~l~dfg~~~~~~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~------~~~~~ 213 (260)
T cd05070 141 CKIADFGLARLIEDNEYTA-RQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMN------NREVL 213 (260)
T ss_pred EEeCCceeeeeccCccccc-ccCCCCCccccChHHHhcCCCcchhhhHHHHHHHHHHHhcCCCCCCCCC------HHHHH
Confidence 9999999997654332211 112235678999999988889999999999999999999 899994322 12222
Q ss_pred HHHHhcCCCCCccCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCChHHHHHHHhhh
Q 011360 430 RKVMNSKNPSRAIDPRLPGNGYEKKMLHVLKIAYICTLHDPEERPNSQYVRCRLSQL 486 (487)
Q Consensus 430 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~~il~~L~~l 486 (487)
........+ ..+. ..+..+.+++.+||..+|++|||+.++.+.|++.
T Consensus 214 ~~~~~~~~~------~~~~----~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~~ 260 (260)
T cd05070 214 EQVERGYRM------PCPQ----DCPISLHELMLQCWKKDPEERPTFEYLQSFLEDY 260 (260)
T ss_pred HHHHcCCCC------CCCC----cCCHHHHHHHHHHcccCcccCcCHHHHHHHHhcC
Confidence 222221111 1111 2235688999999999999999999999999863
No 153
>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul
Probab=100.00 E-value=2.2e-38 Score=303.22 Aligned_cols=260 Identities=23% Similarity=0.367 Sum_probs=202.9
Q ss_pred cccccccccccccceeEEEEEecCC--CCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCCCCccc
Q 011360 192 DCFASLEKIGSGGCGEVYKAELPGS--NGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQIRHRNILP 269 (487)
Q Consensus 192 ~~~~~~~~lg~G~~g~v~~~~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~ 269 (487)
.+|.+.+.||.|+||.||+|.+... .+..+|+|.+.. .........+..|+.++.+++||||++
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~--------------~~~~~~~~~~~~e~~~l~~l~h~~i~~ 69 (267)
T cd05066 4 SCIKIEKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKA--------------GYTEKQRRDFLSEASIMGQFDHPNIIH 69 (267)
T ss_pred HHeEeeeeecccCCCceEEEEEecCCCCceEEEEEECCC--------------CCCHHHHHHHHHHHHHHHhCCCCCcce
Confidence 3588899999999999999976422 234799997732 111223457788999999999999999
Q ss_pred cceEEecCCeeEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCC
Q 011360 270 LLAHMVRPDCHLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVLLNDDM 349 (487)
Q Consensus 270 l~~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nill~~~~ 349 (487)
+++++...+..|+||||+++++|.+++.. ....+++..+..++.|++.||.|| |+.|++||||||+||+++.++
T Consensus 70 ~~~~~~~~~~~~lv~e~~~~~~L~~~~~~---~~~~~~~~~~~~i~~~i~~~l~~l---H~~~i~h~dlkp~nili~~~~ 143 (267)
T cd05066 70 LEGVVTKSKPVMIVTEYMENGSLDAFLRK---HDGQFTVIQLVGMLRGIASGMKYL---SDMGYVHRDLAARNILVNSNL 143 (267)
T ss_pred EEEEEecCCccEEEEEcCCCCCHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHH---HHCCEeehhhchhcEEECCCC
Confidence 99999999999999999999999999864 234688999999999999999999 778899999999999999999
Q ss_pred CEEEeccCCccccCCCCceeeE-eeecccccccCCcccCCCCCCchhHHHHHHHHHHHHHh-CCCCccccCCCCccccHH
Q 011360 350 EACISDLGLAMAIPDGYTRVLI-SYVLGTMAYIAPEYFQQPELSEKCDIFSFGMLLISLVR-GVPSFVFHQNGEEICSPE 427 (487)
Q Consensus 350 ~~kl~DFg~s~~~~~~~~~~~~-~~~~gt~~y~aPE~l~~~~~~~~~DvwslG~~l~ellt-g~~pf~~~~~~~~~~~~~ 427 (487)
.++|+|||++............ ....++..|+|||.+.+..++.++|+||||+++|++++ |..||..... .+
T Consensus 144 ~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~ell~~g~~p~~~~~~------~~ 217 (267)
T cd05066 144 VCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWEMSN------QD 217 (267)
T ss_pred eEEeCCCCcccccccccceeeecCCCccceeecCHhHhccCccCchhhhHHHHHHHHHHhcCCCCCcccCCH------HH
Confidence 9999999999876543221111 11223568999999998889999999999999999886 9999944322 12
Q ss_pred HHHHHHhcCCCCCccCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCChHHHHHHHhhhC
Q 011360 428 WLRKVMNSKNPSRAIDPRLPGNGYEKKMLHVLKIAYICTLHDPEERPNSQYVRCRLSQLL 487 (487)
Q Consensus 428 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~~il~~L~~ll 487 (487)
..........+. .+. ..+..+.+++.+||+.+|++|||+.++++.|++++
T Consensus 218 ~~~~~~~~~~~~------~~~----~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~~ 267 (267)
T cd05066 218 VIKAIEEGYRLP------APM----DCPAALHQLMLDCWQKDRNERPKFEQIVSILDKLI 267 (267)
T ss_pred HHHHHhCCCcCC------CCC----CCCHHHHHHHHHHcccCchhCCCHHHHHHHHHhhC
Confidence 222222221111 111 12346889999999999999999999999999875
No 154
>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an
Probab=100.00 E-value=6.1e-39 Score=321.20 Aligned_cols=255 Identities=21% Similarity=0.294 Sum_probs=196.8
Q ss_pred cccccccccccccceeEEEEEecCCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCCCCccccc
Q 011360 192 DCFASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQIRHRNILPLL 271 (487)
Q Consensus 192 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~ 271 (487)
++|.+.+.||.|+||.||++.. ..+++.+|+|.+... ..........+.+|..+++.++||||++++
T Consensus 43 ~~y~i~~~lG~G~fg~Vy~~~~-~~~~~~~aiK~i~~~------------~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~ 109 (371)
T cd05622 43 EDYEVVKVIGRGAFGEVQLVRH-KSTRKVYAMKLLSKF------------EMIKRSDSAFFWEERDIMAFANSPWVVQLF 109 (371)
T ss_pred hhcEEEEEEeecCCeEEEEEEE-CCCCcEEEEEEEEHH------------HhhhhHHHHHHHHHHHHHHhCCCCCCCeEE
Confidence 4699999999999999999975 467889999987320 111222345577899999999999999999
Q ss_pred eEEecCCeeEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCCE
Q 011360 272 AHMVRPDCHLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVLLNDDMEA 351 (487)
Q Consensus 272 ~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nill~~~~~~ 351 (487)
+++..++..|+||||+++|+|.+++.. ..++...+..++.|++.||.|| |++||+||||||+|||++.++.+
T Consensus 110 ~~~~~~~~~~lv~Ey~~gg~L~~~~~~-----~~~~~~~~~~~~~qi~~aL~~L---H~~~ivHrDLkp~NIll~~~~~i 181 (371)
T cd05622 110 YAFQDDRYLYMVMEYMPGGDLVNLMSN-----YDVPEKWARFYTAEVVLALDAI---HSMGFIHRDVKPDNMLLDKSGHL 181 (371)
T ss_pred EEEEcCCEEEEEEcCCCCCcHHHHHHh-----cCCCHHHHHHHHHHHHHHHHHH---HHCCEEeCCCCHHHEEECCCCCE
Confidence 999999999999999999999999864 3578888999999999999999 77889999999999999999999
Q ss_pred EEeccCCccccCCCCceeeEeeecccccccCCcccCCC----CCCchhHHHHHHHHHHHHHhCCCCccccCCCCccccHH
Q 011360 352 CISDLGLAMAIPDGYTRVLISYVLGTMAYIAPEYFQQP----ELSEKCDIFSFGMLLISLVRGVPSFVFHQNGEEICSPE 427 (487)
Q Consensus 352 kl~DFg~s~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~----~~~~~~DvwslG~~l~elltg~~pf~~~~~~~~~~~~~ 427 (487)
||+|||++......... ......||+.|+|||++.+. .++.++|||||||++|||++|..||...+. ..
T Consensus 182 kL~DfG~a~~~~~~~~~-~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~------~~ 254 (371)
T cd05622 182 KLADFGTCMKMNKEGMV-RCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSL------VG 254 (371)
T ss_pred EEEeCCceeEcCcCCcc-cccCcccCccccCHHHHhccCCCccCCCccceeehhHHHHHHHhCCCCCCCCCH------HH
Confidence 99999999876433221 12345699999999998753 378999999999999999999999943321 22
Q ss_pred HHHHHHhcCCCCCccCCCCCCCCcHHHHHHHHHHHhhccCCCCCC--CCChHHHHH
Q 011360 428 WLRKVMNSKNPSRAIDPRLPGNGYEKKMLHVLKIAYICTLHDPEE--RPNSQYVRC 481 (487)
Q Consensus 428 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~--RPs~~~il~ 481 (487)
....+........ ++. ....+..+.+++..||..++.+ ||++.+|++
T Consensus 255 ~~~~i~~~~~~~~-----~~~--~~~~s~~~~~li~~~L~~~~~r~~r~~~~ei~~ 303 (371)
T cd05622 255 TYSKIMNHKNSLT-----FPD--DNDISKEAKNLICAFLTDREVRLGRNGVEEIKR 303 (371)
T ss_pred HHHHHHcCCCccc-----CCC--cCCCCHHHHHHHHHHcCChhhhcCCCCHHHHhc
Confidence 2333332221111 111 1123456888999999844433 778888876
No 155
>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul
Probab=100.00 E-value=4.7e-39 Score=321.32 Aligned_cols=254 Identities=25% Similarity=0.387 Sum_probs=196.0
Q ss_pred ccccccccccccceeEEEEEecCCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCCCCccccce
Q 011360 193 CFASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQIRHRNILPLLA 272 (487)
Q Consensus 193 ~~~~~~~lg~G~~g~v~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~ 272 (487)
.|.+.+.||.|+||.||++.. ..+++.||+|++.. ...........+..|..++..++||||+++++
T Consensus 2 ~f~~~~~lG~G~~g~V~~~~~-~~~~~~~aiK~~~~------------~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~ 68 (360)
T cd05627 2 DFESLKVIGRGAFGEVRLVQK-KDTGHIYAMKILRK------------ADMLEKEQVAHIRAERDILVEADGAWVVKMFY 68 (360)
T ss_pred CceEEEEEeeCCCEEEEEEEE-CCCCCEEEEEEEEH------------HHHhhhhhHHHHHHHHHHHHhCCCCCEeeEEE
Confidence 588999999999999999975 45789999998842 11122334567788999999999999999999
Q ss_pred EEecCCeeEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCCEE
Q 011360 273 HMVRPDCHLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVLLNDDMEAC 352 (487)
Q Consensus 273 ~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nill~~~~~~k 352 (487)
.+.+.+.+|+||||++||+|.+++.. ...+++..+..++.|++.||.|| |++||+||||||+|||++.++.++
T Consensus 69 ~~~~~~~~~lv~E~~~gg~L~~~l~~----~~~l~~~~~~~~~~qi~~~L~~l---H~~givHrDLkp~NIli~~~~~vk 141 (360)
T cd05627 69 SFQDKRNLYLIMEFLPGGDMMTLLMK----KDTLSEEATQFYIAETVLAIDAI---HQLGFIHRDIKPDNLLLDAKGHVK 141 (360)
T ss_pred EEEcCCEEEEEEeCCCCccHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHH---HHCCeEccCCCHHHEEECCCCCEE
Confidence 99999999999999999999999864 45689999999999999999999 778999999999999999999999
Q ss_pred EeccCCccccCCCCce---------------------------------eeEeeecccccccCCcccCCCCCCchhHHHH
Q 011360 353 ISDLGLAMAIPDGYTR---------------------------------VLISYVLGTMAYIAPEYFQQPELSEKCDIFS 399 (487)
Q Consensus 353 l~DFg~s~~~~~~~~~---------------------------------~~~~~~~gt~~y~aPE~l~~~~~~~~~Dvws 399 (487)
|+|||++......... ......+||+.|+|||++.+..++.++||||
T Consensus 142 L~DfG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwS 221 (360)
T cd05627 142 LSDFGLCTGLKKAHRTEFYRNLTHNPPSDFSFQNMNSKRKAETWKKNRRQLAYSTVGTPDYIAPEVFMQTGYNKLCDWWS 221 (360)
T ss_pred EeeccCCcccccccccccccccccCCcccccccccccccccccccccccccccccCCCccccCHHHHcCCCCCCcceecc
Confidence 9999998754321100 0011346999999999999999999999999
Q ss_pred HHHHHHHHHhCCCCccccCCCCccccHHHHHHHHhcCCCCCccCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCC---h
Q 011360 400 FGMLLISLVRGVPSFVFHQNGEEICSPEWLRKVMNSKNPSRAIDPRLPGNGYEKKMLHVLKIAYICTLHDPEERPN---S 476 (487)
Q Consensus 400 lG~~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs---~ 476 (487)
|||++|||+||.+||..... .+........ .....+++..+ .+.++.+++.+|+ .+|.+|++ +
T Consensus 222 lGvilyel~tG~~Pf~~~~~------~~~~~~i~~~-~~~~~~p~~~~------~s~~~~~li~~l~-~~p~~R~~~~~~ 287 (360)
T cd05627 222 LGVIMYEMLIGYPPFCSETP------QETYRKVMNW-KETLVFPPEVP------ISEKAKDLILRFC-TDSENRIGSNGV 287 (360)
T ss_pred ccceeeecccCCCCCCCCCH------HHHHHHHHcC-CCceecCCCCC------CCHHHHHHHHHhc-cChhhcCCCCCH
Confidence 99999999999999954322 2222223221 11111111111 2245777777766 49999996 4
Q ss_pred HHHH
Q 011360 477 QYVR 480 (487)
Q Consensus 477 ~~il 480 (487)
.+++
T Consensus 288 ~ei~ 291 (360)
T cd05627 288 EEIK 291 (360)
T ss_pred HHHh
Confidence 5554
No 156
>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re
Probab=100.00 E-value=1.5e-38 Score=302.35 Aligned_cols=249 Identities=27% Similarity=0.399 Sum_probs=197.9
Q ss_pred cccccccccccccceeEEEEEecCCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCCCCccccc
Q 011360 192 DCFASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQIRHRNILPLL 271 (487)
Q Consensus 192 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~ 271 (487)
++|.+.+.||.|+||.||++.. .+..+|+|.+.. ......+.+|+.++++++|||+++++
T Consensus 6 ~~~~~~~~lg~g~~~~v~~~~~---~~~~~~~k~~~~-----------------~~~~~~~~~e~~~l~~l~~~~i~~~~ 65 (256)
T cd05082 6 KELKLLQTIGKGEFGDVMLGDY---RGNKVAVKCIKN-----------------DATAQAFLAEASVMTQLRHSNLVQLL 65 (256)
T ss_pred HhCeeeeeecccCCCeEEEEEE---cCCcEEEEEeCC-----------------CchHHHHHHHHHHHHhCCCCCeeeEE
Confidence 4689999999999999999975 577899998632 11234678899999999999999999
Q ss_pred eEEe-cCCeeEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCC
Q 011360 272 AHMV-RPDCHLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVLLNDDME 350 (487)
Q Consensus 272 ~~~~-~~~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nill~~~~~ 350 (487)
+++. ..+..+++|||+++++|.+++.. .....+++..+..++.|++.||+|| |++|++||||||+||+++.++.
T Consensus 66 ~~~~~~~~~~~lv~e~~~~~~L~~~~~~--~~~~~~~~~~~~~~~~~i~~~l~~l---H~~~i~H~dlkp~nil~~~~~~ 140 (256)
T cd05082 66 GVIVEEKGGLYIVTEYMAKGSLVDYLRS--RGRSVLGGDCLLKFSLDVCEAMEYL---EANNFVHRDLAARNVLVSEDNV 140 (256)
T ss_pred EEEEcCCCceEEEEECCCCCcHHHHHHh--cCCCCCCHHHHHHHHHHHHHHHHHH---HhCCEeccccchheEEEcCCCc
Confidence 9764 45678999999999999999875 2334588999999999999999999 7889999999999999999999
Q ss_pred EEEeccCCccccCCCCceeeEeeecccccccCCcccCCCCCCchhHHHHHHHHHHHHHh-CCCCccccCCCCccccHHHH
Q 011360 351 ACISDLGLAMAIPDGYTRVLISYVLGTMAYIAPEYFQQPELSEKCDIFSFGMLLISLVR-GVPSFVFHQNGEEICSPEWL 429 (487)
Q Consensus 351 ~kl~DFg~s~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DvwslG~~l~ellt-g~~pf~~~~~~~~~~~~~~~ 429 (487)
+||+|||++....... ....++..|+|||++.+..++.++|||||||++|+|++ |..||... ...+..
T Consensus 141 ~kl~dfg~~~~~~~~~-----~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~~l~~~g~~p~~~~------~~~~~~ 209 (256)
T cd05082 141 AKVSDFGLTKEASSTQ-----DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRI------PLKDVV 209 (256)
T ss_pred EEecCCccceeccccC-----CCCccceeecCHHHHccCCCCchhhhHHHHHHHHHHHhCCCCCCCCC------CHHHHH
Confidence 9999999987543322 12235678999999998899999999999999999998 89998432 112222
Q ss_pred HHHHhcCCCCCccCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCChHHHHHHHhhh
Q 011360 430 RKVMNSKNPSRAIDPRLPGNGYEKKMLHVLKIAYICTLHDPEERPNSQYVRCRLSQL 486 (487)
Q Consensus 430 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~~il~~L~~l 486 (487)
... ...... ...+. .+..+.+++.+||+.+|++|||+.++++.|+.+
T Consensus 210 ~~~-~~~~~~-~~~~~--------~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~~ 256 (256)
T cd05082 210 PRV-EKGYKM-DAPDG--------CPPVVYDVMKQCWHLDAATRPSFLQLREQLEHI 256 (256)
T ss_pred HHH-hcCCCC-CCCCC--------CCHHHHHHHHHHhcCChhhCcCHHHHHHHHhcC
Confidence 222 222111 11111 235688999999999999999999999999864
No 157
>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored
Probab=100.00 E-value=3.6e-38 Score=301.74 Aligned_cols=260 Identities=23% Similarity=0.366 Sum_probs=202.6
Q ss_pred cccccccccccccceeEEEEEecCC--CCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCCCCccc
Q 011360 192 DCFASLEKIGSGGCGEVYKAELPGS--NGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQIRHRNILP 269 (487)
Q Consensus 192 ~~~~~~~~lg~G~~g~v~~~~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~ 269 (487)
+.|...+.||.|+||.||+|..... ....+|+|.+.. .........+..|+.++.+++||||++
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~--------------~~~~~~~~~~~~e~~~l~~l~h~~i~~ 70 (268)
T cd05063 5 SHITKQKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKP--------------GYTEKQRQDFLSEASIMGQFSHHNIIR 70 (268)
T ss_pred HHceEeeEecCCCCccEEEEEEecCCCCceEEEEEeccc--------------cCCHHHHHHHHHHHHHHhcCCCCCeeE
Confidence 3588889999999999999986422 224789998732 111223456788999999999999999
Q ss_pred cceEEecCCeeEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCC
Q 011360 270 LLAHMVRPDCHLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVLLNDDM 349 (487)
Q Consensus 270 l~~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nill~~~~ 349 (487)
+++++...+..|+||||+++++|.+++.. ....+++..+..++.|++.||.|| |+.|++||||||+||+++.++
T Consensus 71 ~~~~~~~~~~~~lv~e~~~~~~L~~~~~~---~~~~~~~~~~~~~~~~l~~al~~l---H~~~i~H~dlkp~Nili~~~~ 144 (268)
T cd05063 71 LEGVVTKFKPAMIITEYMENGALDKYLRD---HDGEFSSYQLVGMLRGIAAGMKYL---SDMNYVHRDLAARNILVNSNL 144 (268)
T ss_pred EEEEEccCCCcEEEEEcCCCCCHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHH---HHCCeeccccchhhEEEcCCC
Confidence 99999999999999999999999999864 235688999999999999999999 677899999999999999999
Q ss_pred CEEEeccCCccccCCCCceeeE-eeecccccccCCcccCCCCCCchhHHHHHHHHHHHHHh-CCCCccccCCCCccccHH
Q 011360 350 EACISDLGLAMAIPDGYTRVLI-SYVLGTMAYIAPEYFQQPELSEKCDIFSFGMLLISLVR-GVPSFVFHQNGEEICSPE 427 (487)
Q Consensus 350 ~~kl~DFg~s~~~~~~~~~~~~-~~~~gt~~y~aPE~l~~~~~~~~~DvwslG~~l~ellt-g~~pf~~~~~~~~~~~~~ 427 (487)
.+||+|||++............ .....++.|+|||++.+..++.++||||||+++|++++ |..||.... ..+
T Consensus 145 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~il~ell~~g~~p~~~~~------~~~ 218 (268)
T cd05063 145 ECKVSDFGLSRVLEDDPEGTYTTSGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSFGERPYWDMS------NHE 218 (268)
T ss_pred cEEECCCccceecccccccceeccCCCcCceecCHHHhhcCCcChHhHHHHHHHHHHHHHhCCCCCCCcCC------HHH
Confidence 9999999998766443222111 11223457999999998889999999999999999997 999994322 122
Q ss_pred HHHHHHhcCCCCCccCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCChHHHHHHHhhhC
Q 011360 428 WLRKVMNSKNPSRAIDPRLPGNGYEKKMLHVLKIAYICTLHDPEERPNSQYVRCRLSQLL 487 (487)
Q Consensus 428 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~~il~~L~~ll 487 (487)
....+........ + ...+..+.+++.+||+.+|++||++.+|++.|++++
T Consensus 219 ~~~~i~~~~~~~~------~----~~~~~~~~~li~~c~~~~p~~Rp~~~~i~~~l~~~~ 268 (268)
T cd05063 219 VMKAINDGFRLPA------P----MDCPSAVYQLMLQCWQQDRARRPRFVDIVNLLDKLL 268 (268)
T ss_pred HHHHHhcCCCCCC------C----CCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhhC
Confidence 3333322111110 1 112356889999999999999999999999999875
No 158
>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.9e-39 Score=321.26 Aligned_cols=260 Identities=22% Similarity=0.334 Sum_probs=209.8
Q ss_pred HhhhccccccccccccccceeEEEEEecCCCCc--eEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCC
Q 011360 187 FLKKEDCFASLEKIGSGGCGEVYKAELPGSNGK--MIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQIRH 264 (487)
Q Consensus 187 ~~~~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~--~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h 264 (487)
.++.++.....+.||+|.||.|++|.|...+|+ .||||.+... .-......|++|+.+|.+|+|
T Consensus 105 clIpee~i~l~e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d--------------~l~~~mddflrEas~M~~L~H 170 (1039)
T KOG0199|consen 105 CLIPEEQIKLYELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDD--------------SLNAIMDDFLREASHMLKLQH 170 (1039)
T ss_pred eeccHHHHHHHHHhcCcceeeEeeccccCCCCcEEeEEEEeccCC--------------ccchhHHHHHHHHHHHHhccC
Confidence 344455678889999999999999999766664 6899988431 111267889999999999999
Q ss_pred CCccccceEEecCCeeEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEE
Q 011360 265 RNILPLLAHMVRPDCHLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVL 344 (487)
Q Consensus 265 pnIv~l~~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nil 344 (487)
||++++||+..+ ..+.+|||+++.|||.+.|.+ .....|.......++.|||.|+.|| .++++|||||..+|+|
T Consensus 171 ~hliRLyGvVl~-qp~mMV~ELaplGSLldrLrk--a~~~~llv~~Lcdya~QiA~aM~YL---eskrlvHRDLAARNll 244 (1039)
T KOG0199|consen 171 PHLIRLYGVVLD-QPAMMVFELAPLGSLLDRLRK--AKKAILLVSRLCDYAMQIAKAMQYL---ESKRLVHRDLAARNLL 244 (1039)
T ss_pred cceeEEeeeecc-chhhHHhhhcccchHHHHHhh--ccccceeHHHHHHHHHHHHHHHHHH---hhhhhhhhhhhhhhhe
Confidence 999999999887 788999999999999999986 4567788899999999999999999 7777999999999999
Q ss_pred eCCCCCEEEeccCCccccCCCCcee-eEeeecccccccCCcccCCCCCCchhHHHHHHHHHHHHHh-CCCCccccCCCCc
Q 011360 345 LNDDMEACISDLGLAMAIPDGYTRV-LISYVLGTMAYIAPEYFQQPELSEKCDIFSFGMLLISLVR-GVPSFVFHQNGEE 422 (487)
Q Consensus 345 l~~~~~~kl~DFg~s~~~~~~~~~~-~~~~~~gt~~y~aPE~l~~~~~~~~~DvwslG~~l~ellt-g~~pf~~~~~~~~ 422 (487)
+..--.|||+|||+.+.++.+.... +.....-+..|+|||.+....++.++|||+||+++|||+| |..||.+..
T Consensus 245 lasprtVKI~DFGLmRaLg~ned~Yvm~p~rkvPfAWCaPEsLrh~kFShaSDvWmyGVTiWEMFtyGEePW~G~~---- 320 (1039)
T KOG0199|consen 245 LASPRTVKICDFGLMRALGENEDMYVMAPQRKVPFAWCAPESLRHRKFSHASDVWMYGVTIWEMFTYGEEPWVGCR---- 320 (1039)
T ss_pred ecccceeeeecccceeccCCCCcceEecCCCcCcccccCHhHhccccccccchhhhhhhhHHhhhccCCCCCCCCC----
Confidence 9998899999999999987654433 3333445788999999999999999999999999999999 589994432
Q ss_pred cccHHHHHHHHhcCCCCCccCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCChHHHHHH
Q 011360 423 ICSPEWLRKVMNSKNPSRAIDPRLPGNGYEKKMLHVLKIAYICTLHDPEERPNSQYVRCR 482 (487)
Q Consensus 423 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~~il~~ 482 (487)
...+.+.+..+. +++ ....+++++++++..||..+|.+||||..|.+.
T Consensus 321 ---g~qIL~~iD~~e-------rLp--RPk~csedIY~imk~cWah~paDRptFsair~~ 368 (1039)
T KOG0199|consen 321 ---GIQILKNIDAGE-------RLP--RPKYCSEDIYQIMKNCWAHNPADRPTFSAIRED 368 (1039)
T ss_pred ---HHHHHHhccccc-------cCC--CCCCChHHHHHHHHHhccCCccccccHHHHHHh
Confidence 222222322111 111 112345789999999999999999999999743
No 159
>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase. Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M
Probab=100.00 E-value=1.2e-38 Score=308.51 Aligned_cols=262 Identities=22% Similarity=0.336 Sum_probs=203.2
Q ss_pred ccccccccccccccceeEEEEEec----CCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCCCC
Q 011360 191 EDCFASLEKIGSGGCGEVYKAELP----GSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQIRHRN 266 (487)
Q Consensus 191 ~~~~~~~~~lg~G~~g~v~~~~~~----~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpn 266 (487)
.++|.+.+.||.|+||.||++... ..++..||+|.+.. .........+.+|+.+++.+.|||
T Consensus 4 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~--------------~~~~~~~~~~~~ei~~l~~l~h~~ 69 (288)
T cd05050 4 RNNIEYVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKE--------------EASADMQADFQREAALMAEFDHPN 69 (288)
T ss_pred hHhceecccccccccccEEEEEEcccCCCCcceeEEEEecCC--------------CcCHHHHHHHHHHHHHHHhcCCCc
Confidence 356999999999999999999753 23678899998732 111233456888999999999999
Q ss_pred ccccceEEecCCeeEEEEEecCCCCHHHHHhhhh------------------cCCCCCChHHHHHHHHHHHHHHHHHHhc
Q 011360 267 ILPLLAHMVRPDCHLLVYEFMKNGSLQDILDDVS------------------RGRRELDWPSRHRIALGVASGLEYLHMY 328 (487)
Q Consensus 267 Iv~l~~~~~~~~~~~lv~E~~~~gsL~~~l~~~~------------------~~~~~l~~~~~~~i~~qi~~~L~~Lh~~ 328 (487)
|+++++++...+..+++|||+++|+|.+++.... .....+++..++.++.|++.||.||
T Consensus 70 iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~l--- 146 (288)
T cd05050 70 IVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYL--- 146 (288)
T ss_pred hheEEEEEcCCCccEEEEecCCCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHHHHHH---
Confidence 9999999999999999999999999999997421 1123578888999999999999999
Q ss_pred CCCCeeecCCCCCCEEeCCCCCEEEeccCCccccCCCCceeeEeeecccccccCCcccCCCCCCchhHHHHHHHHHHHHH
Q 011360 329 HSASIIHGDIKPRNVLLNDDMEACISDLGLAMAIPDGYTRVLISYVLGTMAYIAPEYFQQPELSEKCDIFSFGMLLISLV 408 (487)
Q Consensus 329 h~~givH~Dlkp~Nill~~~~~~kl~DFg~s~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DvwslG~~l~ell 408 (487)
|++|++||||+|+||+++.++.++|+|||++.................+..|+|||.+.+..++.++|||||||++|+|+
T Consensus 147 H~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~ 226 (288)
T cd05050 147 SERKFVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYYKASENDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIF 226 (288)
T ss_pred HhCCeecccccHhheEecCCCceEECccccceecccCccccccCCCccChhhcCHHHHhcCCCCchhHHHHHHHHHHHHH
Confidence 67889999999999999999999999999987553322111112223467899999998889999999999999999999
Q ss_pred h-CCCCccccCCCCccccHHHHHHHHhcCCCCCccCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCChHHHHHHHhh
Q 011360 409 R-GVPSFVFHQNGEEICSPEWLRKVMNSKNPSRAIDPRLPGNGYEKKMLHVLKIAYICTLHDPEERPNSQYVRCRLSQ 485 (487)
Q Consensus 409 t-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~~il~~L~~ 485 (487)
+ |..||... ...+...... ...... .+. ..+..+.+++.+||+.+|++|||+.++++.|++
T Consensus 227 ~~~~~p~~~~------~~~~~~~~~~-~~~~~~-----~~~----~~~~~l~~li~~~l~~~p~~Rpt~~el~~~l~~ 288 (288)
T cd05050 227 SYGMQPYYGM------AHEEVIYYVR-DGNVLS-----CPD----NCPLELYNLMRLCWSKLPSDRPSFASINRILQR 288 (288)
T ss_pred hCCCCCCCCC------CHHHHHHHHh-cCCCCC-----CCC----CCCHHHHHHHHHHcccCcccCCCHHHHHHHhhC
Confidence 8 78888322 2223333222 222110 111 123568899999999999999999999999874
No 160
>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]
Probab=100.00 E-value=2.6e-39 Score=331.74 Aligned_cols=258 Identities=24% Similarity=0.282 Sum_probs=203.2
Q ss_pred ccccccccccccccceeEEEEEecCCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccC-CCCCccc
Q 011360 191 EDCFASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQI-RHRNILP 269 (487)
Q Consensus 191 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpnIv~ 269 (487)
..++++.+.|.+|||+.||+|+.. ..|..||+|++.. ..+..++.+.+|+.+|++| .|+|||.
T Consensus 36 ~~~v~V~~vLAEGGFa~VYla~~~-~~~~~~AlKrm~~---------------~de~~L~~v~~EI~~MK~L~gh~nIV~ 99 (738)
T KOG1989|consen 36 SHRVTVEKVLAEGGFAQVYLAQDV-KGGKKYALKRMYV---------------NDEEALNAVKREIDIMKLLSGHKNIVS 99 (738)
T ss_pred CEEEEEEEEEccCCcEEEEEEEec-CCCceeeeeeeec---------------CCHHHHHHHHHHHHHHHHhcCCCceee
Confidence 346899999999999999999864 3448999999843 2455778899999999999 5999999
Q ss_pred cce-EEec------CCeeEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCC
Q 011360 270 LLA-HMVR------PDCHLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRN 342 (487)
Q Consensus 270 l~~-~~~~------~~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~N 342 (487)
+++ .... .-.++|+||||.||+|-|++...- ...|++.++++|+.|+++|+++||.+ ..-|||||||-+|
T Consensus 100 yidss~~~~~~~~~~~EvllLmEyC~gg~Lvd~mn~Rl--q~~lte~eVLkIf~dv~~AVa~mH~~-~pPiIHRDLKiEN 176 (738)
T KOG1989|consen 100 YIDSSAINRSSNNGVWEVLLLMEYCKGGSLVDFMNTRL--QTRLTEDEVLKIFYDVCEAVAAMHYL-KPPIIHRDLKIEN 176 (738)
T ss_pred EeccccccccCCCceeEEEeehhhccCCcHHHHHHHHH--hccCChHHHHHHHHHHHHHHHHHhcC-CCccchhhhhhhh
Confidence 999 3322 134689999999999999998633 34499999999999999999999654 2339999999999
Q ss_pred EEeCCCCCEEEeccCCccccCCCCceeeE-------eeecccccccCCccc---CCCCCCchhHHHHHHHHHHHHHhCCC
Q 011360 343 VLLNDDMEACISDLGLAMAIPDGYTRVLI-------SYVLGTMAYIAPEYF---QQPELSEKCDIFSFGMLLISLVRGVP 412 (487)
Q Consensus 343 ill~~~~~~kl~DFg~s~~~~~~~~~~~~-------~~~~gt~~y~aPE~l---~~~~~~~~~DvwslG~~l~elltg~~ 412 (487)
|||+.+|+.||||||.++.....-..... -....|+.|.|||.+ .+...+.|+|||||||+||-|+....
T Consensus 177 vLls~~g~~KLCDFGSatt~~~~~~~~~e~~~ve~eI~k~TTp~YRsPEMIDlysg~pI~eKsDIWALGclLYkLCy~t~ 256 (738)
T KOG1989|consen 177 VLLSADGNYKLCDFGSATTKILSPTSAQEVNYVEEEIEKYTTPQYRSPEMIDLYSGLPIGEKSDIWALGCLLYKLCYFTT 256 (738)
T ss_pred eEEcCCCCEEeCcccccccccCCCccHHHHHHHHHHHHhhCCccccChHHHhhhcCCCCcchhHHHHHHHHHHHHHHhCC
Confidence 99999999999999998754322211000 012368999999976 46688999999999999999999999
Q ss_pred CccccCCCCccccHHHHHHHHhcCCCCCccCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCChHHHHHHHhhh
Q 011360 413 SFVFHQNGEEICSPEWLRKVMNSKNPSRAIDPRLPGNGYEKKMLHVLKIAYICTLHDPEERPNSQYVRCRLSQL 486 (487)
Q Consensus 413 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~~il~~L~~l 486 (487)
||........ +.-......+.+++..+.+||..||+.||++||++-+++..+..+
T Consensus 257 PFe~sg~laI-------------------lng~Y~~P~~p~ys~~l~~LI~~mL~~nP~~RPnI~Qv~~~~~~l 311 (738)
T KOG1989|consen 257 PFEESGKLAI-------------------LNGNYSFPPFPNYSDRLKDLIRTMLQPNPDERPNIYQVLEEIFEL 311 (738)
T ss_pred CcCcCcceeE-------------------EeccccCCCCccHHHHHHHHHHHHhccCcccCCCHHHHHHHHHHH
Confidence 9954432111 111111122356778899999999999999999999999988765
No 161
>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa. Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho
Probab=100.00 E-value=2.8e-38 Score=300.77 Aligned_cols=251 Identities=23% Similarity=0.312 Sum_probs=194.2
Q ss_pred ccccccceeEEEEEecC-CCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCCCCccccceEEecC
Q 011360 199 KIGSGGCGEVYKAELPG-SNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQIRHRNILPLLAHMVRP 277 (487)
Q Consensus 199 ~lg~G~~g~v~~~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~ 277 (487)
.||.|+||.||+|.+.. .++..||+|.+.. .........+.+|+.++++++||||+++++++. .
T Consensus 2 ~ig~G~~g~v~~~~~~~~~~~~~vavk~~~~--------------~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~-~ 66 (257)
T cd05115 2 ELGSGNFGCVKKGVYKMRKKQIDVAIKVLKN--------------ENEKSVRDEMMREAEIMHQLDNPYIVRMIGVCE-A 66 (257)
T ss_pred ccCCCCcccEEEEEEecCCCceeEEEEEccc--------------ccChHHHHHHHHHHHHHHhcCCCCeEEEEEEEc-C
Confidence 48999999999997642 3456799998732 112234467889999999999999999999875 4
Q ss_pred CeeEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCCEEEeccC
Q 011360 278 DCHLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVLLNDDMEACISDLG 357 (487)
Q Consensus 278 ~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nill~~~~~~kl~DFg 357 (487)
+..++||||+++++|.+++.. ....+++..++.++.|++.||.|| |++|++||||||+||+++.++.+||+|||
T Consensus 67 ~~~~lv~e~~~~~~L~~~l~~---~~~~~~~~~~~~~~~~i~~~l~~l---H~~~i~H~dlkp~nil~~~~~~~kl~dfg 140 (257)
T cd05115 67 EALMLVMEMASGGPLNKFLSG---KKDEITVSNVVELMHQVSMGMKYL---EGKNFVHRDLAARNVLLVNQHYAKISDFG 140 (257)
T ss_pred CCeEEEEEeCCCCCHHHHHHh---CCCCCCHHHHHHHHHHHHHHHHHH---HhcCeeecccchheEEEcCCCcEEeccCC
Confidence 578999999999999998863 245789999999999999999999 77889999999999999999999999999
Q ss_pred CccccCCCCceee-EeeecccccccCCcccCCCCCCchhHHHHHHHHHHHHHh-CCCCccccCCCCccccHHHHHHHHhc
Q 011360 358 LAMAIPDGYTRVL-ISYVLGTMAYIAPEYFQQPELSEKCDIFSFGMLLISLVR-GVPSFVFHQNGEEICSPEWLRKVMNS 435 (487)
Q Consensus 358 ~s~~~~~~~~~~~-~~~~~gt~~y~aPE~l~~~~~~~~~DvwslG~~l~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~ 435 (487)
++........... .....+++.|+|||.+.+..++.++||||||+++|++++ |..||.... ..+... ....
T Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~------~~~~~~-~~~~ 213 (257)
T cd05115 141 LSKALGADDSYYKARSAGKWPLKWYAPECINFRKFSSRSDVWSYGITMWEAFSYGQKPYKKMK------GPEVMS-FIEQ 213 (257)
T ss_pred ccccccCCccceeccCCCCCCcccCCHHHHccCCCCchhhHHHHHHHHHHHhcCCCCCcCcCC------HHHHHH-HHHC
Confidence 9976543322111 111223578999999988889999999999999999996 999994322 122222 2222
Q ss_pred CCCCCccCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCChHHHHHHHhhh
Q 011360 436 KNPSRAIDPRLPGNGYEKKMLHVLKIAYICTLHDPEERPNSQYVRCRLSQL 486 (487)
Q Consensus 436 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~~il~~L~~l 486 (487)
.... . .+.. .+.++.+++.+||..+|++||++.+|.+.|+.+
T Consensus 214 ~~~~-~----~~~~----~~~~l~~li~~c~~~~~~~Rp~~~~i~~~l~~~ 255 (257)
T cd05115 214 GKRL-D----CPAE----CPPEMYALMKDCWIYKWEDRPNFAKVEERMRTY 255 (257)
T ss_pred CCCC-C----CCCC----CCHHHHHHHHHHcCCChhhCcCHHHHHHHHhhh
Confidence 2211 1 1111 235688999999999999999999999999875
No 162
>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=5.8e-40 Score=319.42 Aligned_cols=250 Identities=29% Similarity=0.398 Sum_probs=205.7
Q ss_pred ccccccccccccccceeEEEEEecCCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCCCCcccc
Q 011360 191 EDCFASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQIRHRNILPL 270 (487)
Q Consensus 191 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l 270 (487)
+..|.-++.||.|+||.||.|+ +..+...||||++.-.+ ......-..+..|+..+.+++|||+|.+
T Consensus 25 Eklf~dLrEIGHGSFGAVYfAr-d~~n~evVAIKKMsySG------------KQs~EKWqDIlKEVrFL~~l~HPntieY 91 (948)
T KOG0577|consen 25 EKLFSDLREIGHGSFGAVYFAR-DVRNSEVVAIKKMSYSG------------KQSNEKWQDILKEVRFLRQLRHPNTIEY 91 (948)
T ss_pred HHHHHHHHHhcCCccceeEEee-ccCccceeeeeeccccc------------cccHHHHHHHHHHHHHHHhccCCCcccc
Confidence 4468888999999999999997 45688999999985432 1223345678899999999999999999
Q ss_pred ceEEecCCeeEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCC
Q 011360 271 LAHMVRPDCHLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVLLNDDME 350 (487)
Q Consensus 271 ~~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nill~~~~~ 350 (487)
.|+|..+...++||||| -||-.|++.-. .+++.+..+..|+.+.+.||+|| |+.+.||||||+.|||+++.|.
T Consensus 92 kgCyLre~TaWLVMEYC-lGSAsDlleVh---kKplqEvEIAAi~~gaL~gLaYL---HS~~~IHRDiKAGNILLse~g~ 164 (948)
T KOG0577|consen 92 KGCYLREHTAWLVMEYC-LGSASDLLEVH---KKPLQEVEIAAITHGALQGLAYL---HSHNRIHRDIKAGNILLSEPGL 164 (948)
T ss_pred cceeeccchHHHHHHHH-hccHHHHHHHH---hccchHHHHHHHHHHHHHHHHHH---HHhhHHhhhccccceEecCCCe
Confidence 99999999999999999 66889988753 56788889999999999999999 7888999999999999999999
Q ss_pred EEEeccCCccccCCCCceeeEeeecccccccCCcccC---CCCCCchhHHHHHHHHHHHHHhCCCCccccCCCCccccHH
Q 011360 351 ACISDLGLAMAIPDGYTRVLISYVLGTMAYIAPEYFQ---QPELSEKCDIFSFGMLLISLVRGVPSFVFHQNGEEICSPE 427 (487)
Q Consensus 351 ~kl~DFg~s~~~~~~~~~~~~~~~~gt~~y~aPE~l~---~~~~~~~~DvwslG~~l~elltg~~pf~~~~~~~~~~~~~ 427 (487)
|||+|||.+....+. ..++|||.|||||++. .+.|+-++|||||||+..||...++|+... +...
T Consensus 165 VKLaDFGSAsi~~PA------nsFvGTPywMAPEVILAMDEGqYdgkvDvWSLGITCIELAERkPPlFnM------NAMS 232 (948)
T KOG0577|consen 165 VKLADFGSASIMAPA------NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNM------NAMS 232 (948)
T ss_pred eeeccccchhhcCch------hcccCCccccchhHheeccccccCCccceeeccchhhhhhhcCCCccCc------hHHH
Confidence 999999998765443 3578999999999875 568999999999999999999999998332 2222
Q ss_pred HHHHHHhcCCCCCccCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCChHHHHH
Q 011360 428 WLRKVMNSKNPSRAIDPRLPGNGYEKKMLHVLKIAYICTLHDPEERPNSQYVRC 481 (487)
Q Consensus 428 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~~il~ 481 (487)
.+. .+..+.. |.++ ..+.+..|..++..||++-|.+|||.++++.
T Consensus 233 ALY-HIAQNes-----PtLq---s~eWS~~F~~Fvd~CLqKipqeRptse~ll~ 277 (948)
T KOG0577|consen 233 ALY-HIAQNES-----PTLQ---SNEWSDYFRNFVDSCLQKIPQERPTSEELLK 277 (948)
T ss_pred HHH-HHHhcCC-----CCCC---CchhHHHHHHHHHHHHhhCcccCCcHHHHhh
Confidence 232 2333332 1222 3456678999999999999999999998875
No 163
>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=2.5e-38 Score=310.18 Aligned_cols=263 Identities=24% Similarity=0.339 Sum_probs=202.2
Q ss_pred ccccccccccccccceeEEEEEec------CCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccC-C
Q 011360 191 EDCFASLEKIGSGGCGEVYKAELP------GSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQI-R 263 (487)
Q Consensus 191 ~~~~~~~~~lg~G~~g~v~~~~~~------~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~ 263 (487)
.++|.+.+.||.|+||.||+++.. ..+...+|+|.+.. .........+..|+.++..+ .
T Consensus 11 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~--------------~~~~~~~~~~~~E~~~l~~l~~ 76 (314)
T cd05099 11 RDRLVLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKD--------------NATDKDLADLISEMELMKLIGK 76 (314)
T ss_pred HHHeeeeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCC--------------CCChHHHHHHHHHHHHHHhccC
Confidence 456899999999999999999742 12345789997632 11223355678899999999 6
Q ss_pred CCCccccceEEecCCeeEEEEEecCCCCHHHHHhhhhc------------CCCCCChHHHHHHHHHHHHHHHHHHhcCCC
Q 011360 264 HRNILPLLAHMVRPDCHLLVYEFMKNGSLQDILDDVSR------------GRRELDWPSRHRIALGVASGLEYLHMYHSA 331 (487)
Q Consensus 264 hpnIv~l~~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~------------~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~ 331 (487)
||||+++++++...+..|++|||+++|+|.+++..... ....+++..+..++.|++.||.|| |++
T Consensus 77 h~~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~l---H~~ 153 (314)
T cd05099 77 HKNIINLLGVCTQEGPLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYL---ESR 153 (314)
T ss_pred CCCeeeEEEEEccCCceEEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHH---HHC
Confidence 99999999999999999999999999999999975321 124588899999999999999999 778
Q ss_pred CeeecCCCCCCEEeCCCCCEEEeccCCccccCCCCceeeEeeecccccccCCcccCCCCCCchhHHHHHHHHHHHHHh-C
Q 011360 332 SIIHGDIKPRNVLLNDDMEACISDLGLAMAIPDGYTRVLISYVLGTMAYIAPEYFQQPELSEKCDIFSFGMLLISLVR-G 410 (487)
Q Consensus 332 givH~Dlkp~Nill~~~~~~kl~DFg~s~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DvwslG~~l~ellt-g 410 (487)
|++||||||+||+++.++.+||+|||+++...............++..|+|||++.+..++.++||||||+++|+|++ |
T Consensus 154 gi~H~dlkp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~~g 233 (314)
T cd05099 154 RCIHRDLAARNVLVTEDNVMKIADFGLARGVHDIDYYKKTSNGRLPVKWMAPEALFDRVYTHQSDVWSFGILMWEIFTLG 233 (314)
T ss_pred CeeeccccceeEEEcCCCcEEEccccccccccccccccccccCCCCccccCHHHHccCCcCccchhhHHHHHHHHHHhCC
Confidence 999999999999999999999999999986643222111122234568999999998889999999999999999999 7
Q ss_pred CCCccccCCCCccccHHHHHHHHhcCCCCCccCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCChHHHHHHHhhh
Q 011360 411 VPSFVFHQNGEEICSPEWLRKVMNSKNPSRAIDPRLPGNGYEKKMLHVLKIAYICTLHDPEERPNSQYVRCRLSQL 486 (487)
Q Consensus 411 ~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~~il~~L~~l 486 (487)
..||.... ..+... ......... .+. ..+.++.+++.+||..+|++|||+.++++.|+++
T Consensus 234 ~~p~~~~~------~~~~~~-~~~~~~~~~-----~~~----~~~~~l~~li~~cl~~~p~~Rps~~~ll~~l~~~ 293 (314)
T cd05099 234 GSPYPGIP------VEELFK-LLREGHRMD-----KPS----NCTHELYMLMRECWHAVPTQRPTFKQLVEALDKV 293 (314)
T ss_pred CCCCCCCC------HHHHHH-HHHcCCCCC-----CCC----CCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHH
Confidence 88883321 112222 222221111 111 1224688999999999999999999999999875
No 164
>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk
Probab=100.00 E-value=3.2e-38 Score=299.98 Aligned_cols=251 Identities=27% Similarity=0.403 Sum_probs=202.5
Q ss_pred ccccccccccccccceeEEEEEecCCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCCCCcccc
Q 011360 191 EDCFASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQIRHRNILPL 270 (487)
Q Consensus 191 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l 270 (487)
.+.|.+.+.||.|+||.||+|.. .|..||+|.+.. ......++..|+.+++.++||||+++
T Consensus 5 ~~~~~~~~~ig~g~~g~v~~~~~---~~~~v~iK~~~~----------------~~~~~~~~~~e~~~l~~l~~~~i~~~ 65 (256)
T cd05039 5 SKELKLGATIGKGEFGDVMLGDY---RGQKVAVKCLKD----------------DSTAAQAFLAEASVMTTLRHPNLVQL 65 (256)
T ss_pred hhhccceeeeecCCCceEEEEEe---cCcEEEEEEecc----------------chhHHHHHHHHHHHHHhcCCcceeee
Confidence 34688999999999999999975 578899998732 11145678889999999999999999
Q ss_pred ceEEecCCeeEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCC
Q 011360 271 LAHMVRPDCHLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVLLNDDME 350 (487)
Q Consensus 271 ~~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nill~~~~~ 350 (487)
++++...+..++||||+++++|.+++.. .....+++..+..++.|++.||.|| |++|++|+||||+||+++.++.
T Consensus 66 ~~~~~~~~~~~~v~e~~~~~~L~~~~~~--~~~~~~~~~~~~~~~~qi~~~l~~l---h~~~i~H~di~p~Nili~~~~~ 140 (256)
T cd05039 66 LGVVLQGNPLYIVTEYMAKGSLVDYLRS--RGRAVITLAQQLGFALDVCEGMEYL---EEKNFVHRDLAARNVLVSEDLV 140 (256)
T ss_pred EEEEcCCCCeEEEEEecCCCcHHHHHHh--cCCCCCCHHHHHHHHHHHHHHHHHH---HhCCccchhcccceEEEeCCCC
Confidence 9999989999999999999999999875 2234689999999999999999999 7788999999999999999999
Q ss_pred EEEeccCCccccCCCCceeeEeeecccccccCCcccCCCCCCchhHHHHHHHHHHHHHh-CCCCccccCCCCccccHHHH
Q 011360 351 ACISDLGLAMAIPDGYTRVLISYVLGTMAYIAPEYFQQPELSEKCDIFSFGMLLISLVR-GVPSFVFHQNGEEICSPEWL 429 (487)
Q Consensus 351 ~kl~DFg~s~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DvwslG~~l~ellt-g~~pf~~~~~~~~~~~~~~~ 429 (487)
++|+|||.+........ ....+..|+|||.+.+..++.++||||||+++|++++ |..||.... ....
T Consensus 141 ~~l~d~g~~~~~~~~~~-----~~~~~~~~~ape~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~-------~~~~ 208 (256)
T cd05039 141 AKVSDFGLAKEASQGQD-----SGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIP-------LKDV 208 (256)
T ss_pred EEEcccccccccccccc-----cCCCcccccCchhhcCCcCCcHHHHHHHHHHHHHHHhcCCCCCCCCC-------HHHH
Confidence 99999999987633222 2234678999999988889999999999999999997 999984321 1222
Q ss_pred HHHHhcCCCCCccCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCChHHHHHHHhhh
Q 011360 430 RKVMNSKNPSRAIDPRLPGNGYEKKMLHVLKIAYICTLHDPEERPNSQYVRCRLSQL 486 (487)
Q Consensus 430 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~~il~~L~~l 486 (487)
......... ...+. ..+..+.+++.+||..+|++|||+.++++.|+.+
T Consensus 209 ~~~~~~~~~-~~~~~--------~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~~ 256 (256)
T cd05039 209 VPHVEKGYR-MEAPE--------GCPPEVYKVMKDCWELDPAKRPTFKQLREQLALI 256 (256)
T ss_pred HHHHhcCCC-CCCcc--------CCCHHHHHHHHHHhccChhhCcCHHHHHHHHhcC
Confidence 222222111 11111 1235688999999999999999999999999864
No 165
>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including
Probab=100.00 E-value=2.5e-38 Score=307.37 Aligned_cols=266 Identities=21% Similarity=0.322 Sum_probs=199.5
Q ss_pred cccccccccccccceeEEEEEecC-------------CCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHH
Q 011360 192 DCFASLEKIGSGGCGEVYKAELPG-------------SNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIIT 258 (487)
Q Consensus 192 ~~~~~~~~lg~G~~g~v~~~~~~~-------------~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~ 258 (487)
++|.+.+.||+|+||.||++.... .....||+|.+... ........+.+|+.+
T Consensus 5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~--------------~~~~~~~~~~~ei~~ 70 (295)
T cd05097 5 QQLRLKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRAD--------------VTKTARNDFLKEIKI 70 (295)
T ss_pred HhCeehhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCC--------------CCHHHHHHHHHHHHH
Confidence 469999999999999999986532 11235899987321 122334568899999
Q ss_pred hccCCCCCccccceEEecCCeeEEEEEecCCCCHHHHHhhhhc--------CCCCCChHHHHHHHHHHHHHHHHHHhcCC
Q 011360 259 ASQIRHRNILPLLAHMVRPDCHLLVYEFMKNGSLQDILDDVSR--------GRRELDWPSRHRIALGVASGLEYLHMYHS 330 (487)
Q Consensus 259 l~~l~hpnIv~l~~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~--------~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~ 330 (487)
+.+++||||+++++++...+..++||||+++++|.+++..... ....+++..+..++.|++.||.|| |+
T Consensus 71 l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~l---H~ 147 (295)
T cd05097 71 MSRLKNPNIIRLLGVCVSDDPLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYL---AS 147 (295)
T ss_pred HHhCCCCCcCeEEEEEcCCCccEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHH---Hh
Confidence 9999999999999999999999999999999999999864211 112468889999999999999999 77
Q ss_pred CCeeecCCCCCCEEeCCCCCEEEeccCCccccCCCCceeeEeeecccccccCCcccCCCCCCchhHHHHHHHHHHHHHh-
Q 011360 331 ASIIHGDIKPRNVLLNDDMEACISDLGLAMAIPDGYTRVLISYVLGTMAYIAPEYFQQPELSEKCDIFSFGMLLISLVR- 409 (487)
Q Consensus 331 ~givH~Dlkp~Nill~~~~~~kl~DFg~s~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DvwslG~~l~ellt- 409 (487)
.|++||||||+||+++.++.+||+|||++................++..|+|||.+.+..++.++||||||+++|+|++
T Consensus 148 ~~i~H~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~~l~el~~~ 227 (295)
T cd05097 148 LNFVHRDLATRNCLVGNHYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEMFTL 227 (295)
T ss_pred cCeeccccChhhEEEcCCCcEEecccccccccccCcceeccCcCcCceeecChhhhccCCcCchhhHHHHHHHHHHHHHc
Confidence 8899999999999999999999999999876543322222223345778999999988889999999999999999998
Q ss_pred -CCCCccccCCCCccccHHHHHHHHhcC-CC-CCccCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCChHHHHHHHhh
Q 011360 410 -GVPSFVFHQNGEEICSPEWLRKVMNSK-NP-SRAIDPRLPGNGYEKKMLHVLKIAYICTLHDPEERPNSQYVRCRLSQ 485 (487)
Q Consensus 410 -g~~pf~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~~il~~L~~ 485 (487)
|..||....... ............ .. ....++. .+..+.+++.+||+.+|++|||+.+|++.|++
T Consensus 228 ~~~~p~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~--------~~~~l~~li~~~l~~~p~~RPs~~~i~~~l~~ 295 (295)
T cd05097 228 CKEQPYSLLSDEQ---VIENTGEFFRNQGRQIYLSQTPL--------CPSPVFKLMMRCWSRDIKDRPTFNKIHHFLRE 295 (295)
T ss_pred CCCCCCcccChHH---HHHHHHHhhhhccccccCCCCCC--------CCHHHHHHHHHHcCCCchhCcCHHHHHHHHhC
Confidence 566774332211 001111111110 10 0011111 22469999999999999999999999999864
No 166
>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th
Probab=100.00 E-value=5.4e-38 Score=303.23 Aligned_cols=265 Identities=22% Similarity=0.328 Sum_probs=199.7
Q ss_pred cccccccccccccceeEEEEEe---cCCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCCCCcc
Q 011360 192 DCFASLEKIGSGGCGEVYKAEL---PGSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQIRHRNIL 268 (487)
Q Consensus 192 ~~~~~~~~lg~G~~g~v~~~~~---~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv 268 (487)
+.|.+.+.||+|+||.||++.+ +..++..||+|++.. ........+.+|+.++..++||||+
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~---------------~~~~~~~~~~~e~~~l~~l~h~~iv 68 (284)
T cd05081 4 RHLKFIQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQH---------------STAEHLRDFEREIEILKSLQHDNIV 68 (284)
T ss_pred ccceeeeeccCCCCceEEEEEecCCcCCCCcEEEEEEecc---------------CCHHHHHHHHHHHHHHHhCCCCCee
Confidence 4689999999999999999975 345688999998732 1223456788899999999999999
Q ss_pred ccceEEec--CCeeEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeC
Q 011360 269 PLLAHMVR--PDCHLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVLLN 346 (487)
Q Consensus 269 ~l~~~~~~--~~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nill~ 346 (487)
++++++.. ...+++||||+++|+|.+++.. ....+++..+..++.|++.||.|| |++|++||||||+||+++
T Consensus 69 ~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~---~~~~l~~~~~~~~~~~l~~aL~~L---H~~~i~H~dlkp~nili~ 142 (284)
T cd05081 69 KYKGVCYSAGRRNLRLVMEYLPYGSLRDYLQK---HRERLDHRKLLLYASQICKGMEYL---GSKRYVHRDLATRNILVE 142 (284)
T ss_pred EEEEEEccCCCCceEEEEEecCCCCHHHHHHh---cCcCCCHHHHHHHHHHHHHHHHHH---HHCCceeccCCHhhEEEC
Confidence 99997754 3467899999999999999864 234588999999999999999999 788999999999999999
Q ss_pred CCCCEEEeccCCccccCCCCceeeE-eeecccccccCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCccccCCCC----
Q 011360 347 DDMEACISDLGLAMAIPDGYTRVLI-SYVLGTMAYIAPEYFQQPELSEKCDIFSFGMLLISLVRGVPSFVFHQNGE---- 421 (487)
Q Consensus 347 ~~~~~kl~DFg~s~~~~~~~~~~~~-~~~~gt~~y~aPE~l~~~~~~~~~DvwslG~~l~elltg~~pf~~~~~~~---- 421 (487)
.++.+||+|||++............ ....++..|+|||++.+..++.++||||||+++|||++|..|+.......
T Consensus 143 ~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~~~~~~ 222 (284)
T cd05081 143 SENRVKIGDFGLTKVLPQDKEYYKVREPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYSDKSCSPPAEFMRMM 222 (284)
T ss_pred CCCeEEECCCcccccccCCCcceeecCCCCCceEeeCHHHhccCCcChHHHHHHHHHHHHHHhhcCCcCCCcchhhhhhc
Confidence 9999999999999876543322111 11223456999999998889999999999999999999876653221100
Q ss_pred ----c-cccHHHHHHHHhcCCCCCccCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCChHHHHHHHhhh
Q 011360 422 ----E-ICSPEWLRKVMNSKNPSRAIDPRLPGNGYEKKMLHVLKIAYICTLHDPEERPNSQYVRCRLSQL 486 (487)
Q Consensus 422 ----~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~~il~~L~~l 486 (487)
. ......+......... .... ...+..+.+++.+||..+|++|||+.+|++.|+.+
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~-~~~~--------~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~~ 283 (284)
T cd05081 223 GNDKQGQMIVYHLIELLKNNGR-LPAP--------PGCPAEIYAIMKECWNNDPSQRPSFSELALQVEAI 283 (284)
T ss_pred ccccccccchHHHHHHHhcCCc-CCCC--------CCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHhc
Confidence 0 0000111111111110 0001 11235688999999999999999999999999875
No 167
>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase. Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well
Probab=100.00 E-value=2.6e-38 Score=304.45 Aligned_cols=261 Identities=26% Similarity=0.331 Sum_probs=200.9
Q ss_pred cccccccccccccceeEEEEEecCC----CCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCCCCc
Q 011360 192 DCFASLEKIGSGGCGEVYKAELPGS----NGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQIRHRNI 267 (487)
Q Consensus 192 ~~~~~~~~lg~G~~g~v~~~~~~~~----~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnI 267 (487)
+.|.+.+.||.|++|.||+|.+... ++..||+|.+.. .........+..|+.+++.++||||
T Consensus 6 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~--------------~~~~~~~~~~~~e~~~l~~l~~~~i 71 (277)
T cd05036 6 DSITLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPE--------------SCSEQDESDFLMEALIMSKFNHQNI 71 (277)
T ss_pred HHcEeeeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCC--------------CCCHHHHHHHHHHHHHHHhCCCCCE
Confidence 4589999999999999999986431 467889997632 1112234567889999999999999
Q ss_pred cccceEEecCCeeEEEEEecCCCCHHHHHhhhhc---CCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEE
Q 011360 268 LPLLAHMVRPDCHLLVYEFMKNGSLQDILDDVSR---GRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVL 344 (487)
Q Consensus 268 v~l~~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~---~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nil 344 (487)
+++++++.+.+..++||||+++++|.+++..... ....+++..+..++.||+.||.|| |+++++||||||+||+
T Consensus 72 ~~~~~~~~~~~~~~lv~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~L---H~~~ivH~dlkp~nil 148 (277)
T cd05036 72 VRLIGVSFERLPRFILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYL---EENHFIHRDIAARNCL 148 (277)
T ss_pred eeEEEEEccCCCcEEEEecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHH---HHCCEeecccchheEE
Confidence 9999999999999999999999999999975321 123588999999999999999999 6778999999999999
Q ss_pred eCCCC---CEEEeccCCccccCCCCceeeEeeecccccccCCcccCCCCCCchhHHHHHHHHHHHHHh-CCCCccccCCC
Q 011360 345 LNDDM---EACISDLGLAMAIPDGYTRVLISYVLGTMAYIAPEYFQQPELSEKCDIFSFGMLLISLVR-GVPSFVFHQNG 420 (487)
Q Consensus 345 l~~~~---~~kl~DFg~s~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DvwslG~~l~ellt-g~~pf~~~~~~ 420 (487)
++.++ .+||+|||+++................++.|+|||++.+..++.++|||||||++|+|++ |..||.....
T Consensus 149 ~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~~g~~pf~~~~~- 227 (277)
T cd05036 149 LTCKGPGRVAKIADFGMARDIYRASYYRKGGRAMLPIKWMPPEAFLDGIFTSKTDVWSFGVLLWEIFSLGYMPYPGRTN- 227 (277)
T ss_pred EeccCCCcceEeccCccccccCCccceecCCCCCccHhhCCHHHHhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCH-
Confidence 98654 589999999987633222111112234578999999998899999999999999999997 8999953322
Q ss_pred CccccHHHHHHHHhcCCCCCccCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCChHHHHHHHhh
Q 011360 421 EEICSPEWLRKVMNSKNPSRAIDPRLPGNGYEKKMLHVLKIAYICTLHDPEERPNSQYVRCRLSQ 485 (487)
Q Consensus 421 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~~il~~L~~ 485 (487)
.+..........+ ..+..+ +..+.+++.+||+.+|++|||+.+|++.|.+
T Consensus 228 -----~~~~~~~~~~~~~--~~~~~~--------~~~~~~~i~~cl~~~p~~Rps~~~vl~~l~~ 277 (277)
T cd05036 228 -----QEVMEFVTGGGRL--DPPKGC--------PGPVYRIMTDCWQHTPEDRPNFATILERIQY 277 (277)
T ss_pred -----HHHHHHHHcCCcC--CCCCCC--------CHHHHHHHHHHcCCCcccCcCHHHHHHHhhC
Confidence 1222222222111 111122 2468899999999999999999999998863
No 168
>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4.9e-40 Score=321.86 Aligned_cols=253 Identities=25% Similarity=0.359 Sum_probs=207.5
Q ss_pred ccccccccccccccceeEEEEEecCCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCCCCcccc
Q 011360 191 EDCFASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQIRHRNILPL 270 (487)
Q Consensus 191 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l 270 (487)
.+.|.++..||.|+||+||+|.. ..++..-|.|++ .......++.++-|+.+|+.+.||+||++
T Consensus 31 ~d~WeIiGELGDGAFGKVyKA~n-ket~~lAAaKvI---------------etkseEELEDylVEIeILa~CdHP~ivkL 94 (1187)
T KOG0579|consen 31 RDHWEIIGELGDGAFGKVYKAVN-KETKLLAAAKVI---------------ETKSEEELEDYLVEIEILAECDHPVIVKL 94 (1187)
T ss_pred HHHHHHHhhhcCccchhhhhhhc-ccchhhhhhhhh---------------cccchhHHhhhhhhhhhhhcCCChHHHHH
Confidence 34578889999999999999964 456666666655 24456678889999999999999999999
Q ss_pred ceEEecCCeeEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCC
Q 011360 271 LAHMVRPDCHLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVLLNDDME 350 (487)
Q Consensus 271 ~~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nill~~~~~ 350 (487)
++.|...+.++|+.|||.||.+...+-.. +..+++.++..++.|++.||.|| |+++|||||||+.|||++-+|.
T Consensus 95 l~ayy~enkLwiliEFC~GGAVDaimlEL---~r~LtE~QIqvvc~q~ldALn~L---Hs~~iIHRDLKAGNiL~TldGd 168 (1187)
T KOG0579|consen 95 LSAYYFENKLWILIEFCGGGAVDAIMLEL---GRVLTEDQIQVVCYQVLDALNWL---HSQNIIHRDLKAGNILLTLDGD 168 (1187)
T ss_pred HHHHhccCceEEEEeecCCchHhHHHHHh---ccccchHHHHHHHHHHHHHHHHH---hhcchhhhhccccceEEEecCc
Confidence 99999999999999999999998887643 67899999999999999999999 8889999999999999999999
Q ss_pred EEEeccCCccccCCCCceeeEeeecccccccCCcccC-----CCCCCchhHHHHHHHHHHHHHhCCCCccccCCCCcccc
Q 011360 351 ACISDLGLAMAIPDGYTRVLISYVLGTMAYIAPEYFQ-----QPELSEKCDIFSFGMLLISLVRGVPSFVFHQNGEEICS 425 (487)
Q Consensus 351 ~kl~DFg~s~~~~~~~~~~~~~~~~gt~~y~aPE~l~-----~~~~~~~~DvwslG~~l~elltg~~pf~~~~~~~~~~~ 425 (487)
++|+|||.+-.... +......+.|||.|||||+.. ..+|+.++||||||++|.||..+.+|- .+...
T Consensus 169 irLADFGVSAKn~~--t~qkRDsFIGTPYWMAPEVvmCET~KD~PYDykaDiWSlGITLIEMAqiEPPH------helnp 240 (1187)
T KOG0579|consen 169 IRLADFGVSAKNKS--TRQKRDSFIGTPYWMAPEVVMCETFKDQPYDYKADIWSLGITLIEMAQIEPPH------HELNP 240 (1187)
T ss_pred Eeeecccccccchh--HHhhhccccCCcccccchheeeccccCCCchhhhhHHhhhhHHHHHhccCCCc------cccch
Confidence 99999999854322 122224678999999999864 568999999999999999999999997 33344
Q ss_pred HHHHHHHHhcCCCCCccCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCChHHHHH
Q 011360 426 PEWLRKVMNSKNPSRAIDPRLPGNGYEKKMLHVLKIAYICTLHDPEERPNSQYVRC 481 (487)
Q Consensus 426 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~~il~ 481 (487)
...+.++.....|...-+ ...+..+.+++.+||.+||..||++.+|++
T Consensus 241 MRVllKiaKSePPTLlqP--------S~Ws~~F~DfLk~cL~Knp~~Rp~aaqll~ 288 (1187)
T KOG0579|consen 241 MRVLLKIAKSEPPTLLQP--------SHWSRSFSDFLKRCLVKNPRNRPPAAQLLK 288 (1187)
T ss_pred HHHHHHHhhcCCCcccCc--------chhhhHHHHHHHHHHhcCCccCCCHHHHhh
Confidence 444555554444433322 234466999999999999999999999875
No 169
>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]
Probab=100.00 E-value=3.6e-39 Score=320.87 Aligned_cols=198 Identities=28% Similarity=0.423 Sum_probs=174.2
Q ss_pred ccccccccccccceeEEEEEecCCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCC-C-----CC
Q 011360 193 CFASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQIR-H-----RN 266 (487)
Q Consensus 193 ~~~~~~~lg~G~~g~v~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-h-----pn 266 (487)
+|.+.+.||+|+||.|.+| ++..+++.||||+++ ......++...|+.+|..|+ | -|
T Consensus 187 rY~V~e~LGkGtFGQVvk~-~d~~T~e~VAIKIiK----------------N~k~f~~Q~~~Ei~iL~~ln~~d~~~~~n 249 (586)
T KOG0667|consen 187 RYEVLEVLGKGSFGQVVKA-YDHKTGEIVAIKIIK----------------NKKRFLRQAQIEIRILELLNKHDPDDKYN 249 (586)
T ss_pred EEEEEEEecccccceeEEE-EecCCCcEEEEEeec----------------cChHHHHHHHHHHHHHHHHhccCCCCCee
Confidence 5889999999999999999 577899999999983 34556778889999999996 4 38
Q ss_pred ccccceEEecCCeeEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeC
Q 011360 267 ILPLLAHMVRPDCHLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVLLN 346 (487)
Q Consensus 267 Iv~l~~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nill~ 346 (487)
+|+++++|...+++|||+|.+ ..+|.++++. .....++...++.|+.||+.||.+| |..||||+||||+|||+.
T Consensus 250 ~Vrm~d~F~fr~HlciVfELL-~~NLYellK~--n~f~Glsl~~ir~~~~Qil~~L~~L---~~l~IIHcDLKPENILL~ 323 (586)
T KOG0667|consen 250 IVRMLDYFYFRNHLCIVFELL-STNLYELLKN--NKFRGLSLPLVRKFAQQILTALLFL---HELGIIHCDLKPENILLK 323 (586)
T ss_pred EEEeeeccccccceeeeehhh-hhhHHHHHHh--cCCCCCCHHHHHHHHHHHHHHHHHH---HhCCeeeccCChhheeec
Confidence 999999999999999999999 6699999987 4456699999999999999999999 788899999999999997
Q ss_pred CC--CCEEEeccCCccccCCCCceeeEeeecccccccCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCccccC
Q 011360 347 DD--MEACISDLGLAMAIPDGYTRVLISYVLGTMAYIAPEYFQQPELSEKCDIFSFGMLLISLVRGVPSFVFHQ 418 (487)
Q Consensus 347 ~~--~~~kl~DFg~s~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DvwslG~~l~elltg~~pf~~~~ 418 (487)
+- ..+||+|||+|+....... .++.+..|.|||++.+.+|+.+.|||||||++.||++|.+.|.+.+
T Consensus 324 ~~~r~~vKVIDFGSSc~~~q~vy-----tYiQSRfYRAPEVILGlpY~~~IDmWSLGCIlAEL~tG~PLfpG~n 392 (586)
T KOG0667|consen 324 DPKRSRIKVIDFGSSCFESQRVY-----TYIQSRFYRAPEVILGLPYDTAIDMWSLGCILAELFTGEPLFPGDN 392 (586)
T ss_pred cCCcCceeEEecccccccCCcce-----eeeeccccccchhhccCCCCCccceeehhhhHHhHhcCccccCCCC
Confidence 53 3699999999987655432 4567889999999999999999999999999999999999885543
No 170
>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=100.00 E-value=1e-38 Score=318.91 Aligned_cols=263 Identities=25% Similarity=0.335 Sum_probs=193.6
Q ss_pred cccccccccccccceeEEEEEecCCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCCCCccccc
Q 011360 192 DCFASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQIRHRNILPLL 271 (487)
Q Consensus 192 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~ 271 (487)
++|.+.+.||.|+||.||++.. ..+|..||+|++... .........+.+|+.+++.++||||++++
T Consensus 21 ~~y~~~~~lg~G~~g~V~~~~~-~~~~~~vavK~~~~~-------------~~~~~~~~~~~~E~~~l~~l~h~niv~~~ 86 (359)
T cd07876 21 KRYQQLKPIGSGAQGIVCAAFD-TVLGINVAVKKLSRP-------------FQNQTHAKRAYRELVLLKCVNHKNIISLL 86 (359)
T ss_pred hceEEEEEeecCCCEEEEEEEE-cCCCceeEEEEeccc-------------ccchhHHHHHHHHHHHHHhCCCCCEeeee
Confidence 4699999999999999999964 467899999988321 11223345677899999999999999999
Q ss_pred eEEecCC------eeEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEe
Q 011360 272 AHMVRPD------CHLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVLL 345 (487)
Q Consensus 272 ~~~~~~~------~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nill 345 (487)
+++...+ ..|+||||+++ +|...+. ..++...+..++.|++.||.|| |++||+||||||+||++
T Consensus 87 ~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~------~~~~~~~~~~~~~qi~~~L~~L---H~~~ivHrDlkp~NIl~ 156 (359)
T cd07876 87 NVFTPQKSLEEFQDVYLVMELMDA-NLCQVIH------MELDHERMSYLLYQMLCGIKHL---HSAGIIHRDLKPSNIVV 156 (359)
T ss_pred eeeccCCCccccceeEEEEeCCCc-CHHHHHh------ccCCHHHHHHHHHHHHHHHHHH---HhCCcccCCCCHHHEEE
Confidence 9886543 46999999965 6666653 2478888999999999999999 77899999999999999
Q ss_pred CCCCCEEEeccCCccccCCCCceeeEeeecccccccCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCccccCCCCc---
Q 011360 346 NDDMEACISDLGLAMAIPDGYTRVLISYVLGTMAYIAPEYFQQPELSEKCDIFSFGMLLISLVRGVPSFVFHQNGEE--- 422 (487)
Q Consensus 346 ~~~~~~kl~DFg~s~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DvwslG~~l~elltg~~pf~~~~~~~~--- 422 (487)
+.++.+||+|||++........ .....||+.|+|||++.+..++.++|||||||++|+|++|..||...+....
T Consensus 157 ~~~~~~kl~Dfg~a~~~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~el~tg~~pf~~~~~~~~~~~ 233 (359)
T cd07876 157 KSDCTLKILDFGLARTACTNFM---MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKGSVIFQGTDHIDQWNK 233 (359)
T ss_pred CCCCCEEEecCCCccccccCcc---CCCCcccCCCCCchhccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHH
Confidence 9999999999999976433221 1335689999999999999999999999999999999999999964432100
Q ss_pred ------cccHHH-------HHHHHhcCCC--CCccCCCCCC-------CCcHHHHHHHHHHHhhccCCCCCCCCChHHHH
Q 011360 423 ------ICSPEW-------LRKVMNSKNP--SRAIDPRLPG-------NGYEKKMLHVLKIAYICTLHDPEERPNSQYVR 480 (487)
Q Consensus 423 ------~~~~~~-------~~~~~~~~~~--~~~~~~~~~~-------~~~~~~~~~l~~li~~cl~~~P~~RPs~~~il 480 (487)
....++ ...+...... ...+....+. .........+.+++.+||+.||++|||+.+++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l 313 (359)
T cd07876 234 VIEQLGTPSAEFMNRLQPTVRNYVENRPQYPGISFEELFPDWIFPSESERDKLKTSQARDLLSKMLVIDPDKRISVDEAL 313 (359)
T ss_pred HHHhcCCCcHHHHHHHHHHHHHHHhhCCCCCCcchhhhccccccccccccccccchhHHHHHHHHhccCcccCCCHHHHh
Confidence 000000 1111111000 0000000000 00111235688999999999999999999998
Q ss_pred H
Q 011360 481 C 481 (487)
Q Consensus 481 ~ 481 (487)
.
T Consensus 314 ~ 314 (359)
T cd07876 314 R 314 (359)
T ss_pred c
Confidence 6
No 171
>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase. Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.
Probab=100.00 E-value=5.8e-38 Score=304.36 Aligned_cols=254 Identities=26% Similarity=0.349 Sum_probs=199.5
Q ss_pred hccccccccccccccceeEEEEEecCCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCCCCccc
Q 011360 190 KEDCFASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQIRHRNILP 269 (487)
Q Consensus 190 ~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~ 269 (487)
..+.|++.+.||.|+||.||+|.. ..++..+++|.+.. ........+..|+.+++.++||||++
T Consensus 10 ~~~~y~i~~~lg~g~~g~vy~~~~-~~~~~~~~~k~~~~---------------~~~~~~~~~~~e~~~l~~l~h~~i~~ 73 (292)
T cd06644 10 PNEVWEIIGELGDGAFGKVYKAKN-KETGALAAAKVIET---------------KSEEELEDYMVEIEILATCNHPYIVK 73 (292)
T ss_pred cchhhhhhheecCCCCeEEEEEEE-CCCCceEEEEEecc---------------CCHHHHHHHHHHHHHHHhCCCCcEee
Confidence 345699999999999999999975 45788999998732 12334567788999999999999999
Q ss_pred cceEEecCCeeEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCC
Q 011360 270 LLAHMVRPDCHLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVLLNDDM 349 (487)
Q Consensus 270 l~~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nill~~~~ 349 (487)
+++.+..+...|+||||+++++|..++.. ....+++..+..++.|++.||.|| |+.|++||||+|+||+++.++
T Consensus 74 ~~~~~~~~~~~~lv~e~~~~~~l~~~~~~---~~~~l~~~~~~~~~~ql~~~l~~l---H~~~i~H~dlkp~Nili~~~~ 147 (292)
T cd06644 74 LLGAFYWDGKLWIMIEFCPGGAVDAIMLE---LDRGLTEPQIQVICRQMLEALQYL---HSMKIIHRDLKAGNVLLTLDG 147 (292)
T ss_pred eEEEEEeCCeEEEEEecCCCCcHHHHHHh---hcCCCCHHHHHHHHHHHHHHHHHH---hcCCeeecCCCcceEEEcCCC
Confidence 99999999999999999999999888753 235688999999999999999999 788999999999999999999
Q ss_pred CEEEeccCCccccCCCCceeeEeeecccccccCCcccC-----CCCCCchhHHHHHHHHHHHHHhCCCCccccCCCCccc
Q 011360 350 EACISDLGLAMAIPDGYTRVLISYVLGTMAYIAPEYFQ-----QPELSEKCDIFSFGMLLISLVRGVPSFVFHQNGEEIC 424 (487)
Q Consensus 350 ~~kl~DFg~s~~~~~~~~~~~~~~~~gt~~y~aPE~l~-----~~~~~~~~DvwslG~~l~elltg~~pf~~~~~~~~~~ 424 (487)
.++|+|||++......... .....+++.|+|||++. ...++.++||||||+++|+|++|.+||.....
T Consensus 148 ~~kl~dfg~~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~----- 220 (292)
T cd06644 148 DIKLADFGVSAKNVKTLQR--RDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNP----- 220 (292)
T ss_pred CEEEccCccceeccccccc--cceecCCccccCceeeccccccCCCCCchhhhHhHHHHHHHHhcCCCCCccccH-----
Confidence 9999999998654332111 12345788999999885 34578899999999999999999999943221
Q ss_pred cHHHHHHHHhcCCCCCccCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCChHHHHH
Q 011360 425 SPEWLRKVMNSKNPSRAIDPRLPGNGYEKKMLHVLKIAYICTLHDPEERPNSQYVRC 481 (487)
Q Consensus 425 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~~il~ 481 (487)
............+.... ....+.++.+++.+||..+|++||++.++++
T Consensus 221 -~~~~~~~~~~~~~~~~~--------~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 268 (292)
T cd06644 221 -MRVLLKIAKSEPPTLSQ--------PSKWSMEFRDFLKTALDKHPETRPSAAQLLE 268 (292)
T ss_pred -HHHHHHHhcCCCccCCC--------CcccCHHHHHHHHHHhcCCcccCcCHHHHhc
Confidence 12222222222111111 1123346889999999999999999999975
No 172
>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes. Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an
Probab=100.00 E-value=2.7e-38 Score=301.35 Aligned_cols=254 Identities=27% Similarity=0.393 Sum_probs=198.0
Q ss_pred cccccccccccccceeEEEEEecCCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCCCCccccc
Q 011360 192 DCFASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQIRHRNILPLL 271 (487)
Q Consensus 192 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~ 271 (487)
++|.+...||.|++|.||+|... .+..+|+|.+... ......+.+|+.+++.++|||+++++
T Consensus 6 ~~~~~~~~ig~g~~~~v~~~~~~--~~~~~~lK~~~~~----------------~~~~~~~~~E~~~l~~l~h~~i~~~~ 67 (260)
T cd05069 6 ESLRLDVKLGQGCFGEVWMGTWN--GTTKVAIKTLKPG----------------TMMPEAFLQEAQIMKKLRHDKLVPLY 67 (260)
T ss_pred HHeeeeeeecCcCCCeEEEEEEc--CCceEEEEEcccC----------------CccHHHHHHHHHHHHhCCCCCeeeEE
Confidence 45889999999999999999764 3456999976321 11224577899999999999999999
Q ss_pred eEEecCCeeEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCCE
Q 011360 272 AHMVRPDCHLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVLLNDDMEA 351 (487)
Q Consensus 272 ~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nill~~~~~~ 351 (487)
+++. .+..+++|||+.+++|.+++.. .....+++..+..++.|++.||.|| |+.|++|+||+|+||++++++.+
T Consensus 68 ~~~~-~~~~~~v~e~~~~~~L~~~~~~--~~~~~~~~~~~~~~~~~l~~al~~l---H~~~i~H~dl~~~Nill~~~~~~ 141 (260)
T cd05069 68 AVVS-EEPIYIVTEFMGKGSLLDFLKE--GDGKYLKLPQLVDMAAQIADGMAYI---ERMNYIHRDLRAANILVGDNLVC 141 (260)
T ss_pred EEEc-CCCcEEEEEcCCCCCHHHHHhh--CCCCCCCHHHHHHHHHHHHHHHHHH---HhCCEeecccCcceEEEcCCCeE
Confidence 8875 4568999999999999999965 2344578999999999999999999 77789999999999999999999
Q ss_pred EEeccCCccccCCCCceeeEeeecccccccCCcccCCCCCCchhHHHHHHHHHHHHHh-CCCCccccCCCCccccHHHHH
Q 011360 352 CISDLGLAMAIPDGYTRVLISYVLGTMAYIAPEYFQQPELSEKCDIFSFGMLLISLVR-GVPSFVFHQNGEEICSPEWLR 430 (487)
Q Consensus 352 kl~DFg~s~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DvwslG~~l~ellt-g~~pf~~~~~~~~~~~~~~~~ 430 (487)
+|+|||.+.......... .....++..|+|||.+.+..++.++||||||+++|+|+| |..||.... ..+...
T Consensus 142 ~l~dfg~~~~~~~~~~~~-~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~------~~~~~~ 214 (260)
T cd05069 142 KIADFGLARLIEDNEYTA-RQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMV------NREVLE 214 (260)
T ss_pred EECCCccceEccCCcccc-cCCCccchhhCCHHHhccCCcChHHHHHHHHHHHHHHHhCCCCCCCCCC------HHHHHH
Confidence 999999997654332111 112335678999999988889999999999999999999 899994322 122222
Q ss_pred HHHhcCCCCCccCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCChHHHHHHHhhh
Q 011360 431 KVMNSKNPSRAIDPRLPGNGYEKKMLHVLKIAYICTLHDPEERPNSQYVRCRLSQL 486 (487)
Q Consensus 431 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~~il~~L~~l 486 (487)
.......+ . .+ ...+..+.+++.+||..+|++|||+++|++.|+++
T Consensus 215 ~~~~~~~~--~----~~----~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~ 260 (260)
T cd05069 215 QVERGYRM--P----CP----QGCPESLHELMKLCWKKDPDERPTFEYIQSFLEDY 260 (260)
T ss_pred HHHcCCCC--C----CC----cccCHHHHHHHHHHccCCcccCcCHHHHHHHHhcC
Confidence 22221111 1 11 12335689999999999999999999999999863
No 173
>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase. Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.
Probab=100.00 E-value=2.2e-38 Score=305.65 Aligned_cols=252 Identities=23% Similarity=0.332 Sum_probs=197.7
Q ss_pred cccccccccccccceeEEEEEecCCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCCCCccccc
Q 011360 192 DCFASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQIRHRNILPLL 271 (487)
Q Consensus 192 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~ 271 (487)
+.|++.+.||.|+||.||+|.. ..++..+++|.+.. ........+.+|+.+++.+.||||++++
T Consensus 5 ~~~~i~~~lg~g~~g~v~~~~~-~~~~~~~~~k~~~~---------------~~~~~~~~~~~e~~~l~~l~h~~ii~~~ 68 (282)
T cd06643 5 EFWEIIGELGDGAFGKVYKAQN-KETGVLAAAKVIDT---------------KSEEELEDYMVEIDILASCDHPNIVKLL 68 (282)
T ss_pred HHHHHHhhcccCCCeEEEEEEE-CCCCeEEEEEEeCC---------------CCHHHHHHHHHHHHHHHHCCCCCeeeEE
Confidence 3478889999999999999975 45788899998732 1123455678899999999999999999
Q ss_pred eEEecCCeeEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCCE
Q 011360 272 AHMVRPDCHLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVLLNDDMEA 351 (487)
Q Consensus 272 ~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nill~~~~~~ 351 (487)
+++...+..++||||+++++|..++.. ....+++..+..++.|++.||.|| |+.|++||||+|+||+++.++.+
T Consensus 69 ~~~~~~~~~~~v~e~~~~~~l~~~~~~---~~~~l~~~~~~~~~~qi~~~L~~L---H~~~i~H~dlkp~nili~~~~~~ 142 (282)
T cd06643 69 DAFYYENNLWILIEFCAGGAVDAVMLE---LERPLTEPQIRVVCKQTLEALNYL---HENKIIHRDLKAGNILFTLDGDI 142 (282)
T ss_pred EEEeeCCEEEEEEEecCCCcHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHH---HHCCeeecCCCcccEEEccCCCE
Confidence 999999999999999999999888753 245689999999999999999999 67889999999999999999999
Q ss_pred EEeccCCccccCCCCceeeEeeecccccccCCcccC-----CCCCCchhHHHHHHHHHHHHHhCCCCccccCCCCccccH
Q 011360 352 CISDLGLAMAIPDGYTRVLISYVLGTMAYIAPEYFQ-----QPELSEKCDIFSFGMLLISLVRGVPSFVFHQNGEEICSP 426 (487)
Q Consensus 352 kl~DFg~s~~~~~~~~~~~~~~~~gt~~y~aPE~l~-----~~~~~~~~DvwslG~~l~elltg~~pf~~~~~~~~~~~~ 426 (487)
+|+|||++......... .....+++.|+|||++. +..++.++|||||||++|+|++|.+||.... ..
T Consensus 143 kl~dfg~~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~------~~ 214 (282)
T cd06643 143 KLADFGVSAKNTRTIQR--RDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAQIEPPHHELN------PM 214 (282)
T ss_pred EEccccccccccccccc--cccccccccccCHhhccccCCCCCCCCccchhhhHHHHHHHHccCCCCccccC------HH
Confidence 99999998765332211 13346889999999984 3457889999999999999999999994322 11
Q ss_pred HHHHHHHhcCCCCCccCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCChHHHHH
Q 011360 427 EWLRKVMNSKNPSRAIDPRLPGNGYEKKMLHVLKIAYICTLHDPEERPNSQYVRC 481 (487)
Q Consensus 427 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~~il~ 481 (487)
+..........+....+. ..+..+.+++.+||+.+|++|||+.++++
T Consensus 215 ~~~~~~~~~~~~~~~~~~--------~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 261 (282)
T cd06643 215 RVLLKIAKSEPPTLAQPS--------RWSSEFKDFLKKCLEKNVDARWTTTQLLQ 261 (282)
T ss_pred HHHHHHhhcCCCCCCCcc--------ccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 222222222221111111 12356889999999999999999999874
No 174
>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati
Probab=100.00 E-value=2.2e-38 Score=301.02 Aligned_cols=252 Identities=19% Similarity=0.310 Sum_probs=201.1
Q ss_pred ccccccccccccceeEEEEEecCCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCCCCccccce
Q 011360 193 CFASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQIRHRNILPLLA 272 (487)
Q Consensus 193 ~~~~~~~lg~G~~g~v~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~ 272 (487)
+|.+.+.||.|+||.||++.. ..++..+|+|.+... ........+..|+.+++.++||||+++++
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~-~~~~~~~~iK~~~~~--------------~~~~~~~~~~~e~~~l~~l~h~~i~~~~~ 65 (255)
T cd08219 1 QYNVLRVVGEGSFGRALLVQH-VNSDQKYAMKEIRLP--------------KSSSAVEDSRKEAVLLAKMKHPNIVAFKE 65 (255)
T ss_pred CceEEEEeeccCCeEEEEEEE-cCCCceEEEEEEEcC--------------cchHHHHHHHHHHHHHHhCCCCCcceEEE
Confidence 377889999999999999975 457889999987431 11223456778999999999999999999
Q ss_pred EEecCCeeEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCCEE
Q 011360 273 HMVRPDCHLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVLLNDDMEAC 352 (487)
Q Consensus 273 ~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nill~~~~~~k 352 (487)
.+...+.+|++|||+++|+|.+++.. ..+..++...+..++.|++.||.|| |++|++|+||+|+||+++.++.++
T Consensus 66 ~~~~~~~~~lv~e~~~~~~l~~~~~~--~~~~~~~~~~~~~~~~~i~~al~~l---H~~~i~H~dl~p~nili~~~~~~~ 140 (255)
T cd08219 66 SFEADGHLYIVMEYCDGGDLMQKIKL--QRGKLFPEDTILQWFVQMCLGVQHI---HEKRVLHRDIKSKNIFLTQNGKVK 140 (255)
T ss_pred EEEECCEEEEEEeeCCCCcHHHHHHh--ccCCCCCHHHHHHHHHHHHHHHHHH---hhCCcccCCCCcceEEECCCCcEE
Confidence 99999999999999999999998864 2345678999999999999999999 788999999999999999999999
Q ss_pred EeccCCccccCCCCceeeEeeecccccccCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCccccCCCCccccHHHHHHH
Q 011360 353 ISDLGLAMAIPDGYTRVLISYVLGTMAYIAPEYFQQPELSEKCDIFSFGMLLISLVRGVPSFVFHQNGEEICSPEWLRKV 432 (487)
Q Consensus 353 l~DFg~s~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DvwslG~~l~elltg~~pf~~~~~~~~~~~~~~~~~~ 432 (487)
++|||.+........ ......|++.|+|||++.+..++.++|+||||+++|+|++|..||.... ........
T Consensus 141 l~dfg~~~~~~~~~~--~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~------~~~~~~~~ 212 (255)
T cd08219 141 LGDFGSARLLTSPGA--YACTYVGTPYYVPPEIWENMPYNNKSDIWSLGCILYELCTLKHPFQANS------WKNLILKV 212 (255)
T ss_pred EcccCcceeeccccc--ccccccCCccccCHHHHccCCcCchhhhhhhchhheehhhccCCCCCCC------HHHHHHHH
Confidence 999999876543221 1134568899999999998889999999999999999999999994321 11222222
Q ss_pred HhcCCCCCccCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCChHHHHHH
Q 011360 433 MNSKNPSRAIDPRLPGNGYEKKMLHVLKIAYICTLHDPEERPNSQYVRCR 482 (487)
Q Consensus 433 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~~il~~ 482 (487)
.. .... . ++. ..+..+.+++.+||+.+|++|||+.+|+..
T Consensus 213 ~~-~~~~-~----~~~----~~~~~~~~li~~~l~~~P~~Rp~~~~il~~ 252 (255)
T cd08219 213 CQ-GSYK-P----LPS----HYSYELRSLIKQMFKRNPRSRPSATTILSR 252 (255)
T ss_pred hc-CCCC-C----CCc----ccCHHHHHHHHHHHhCCcccCCCHHHHhhc
Confidence 22 2111 1 111 123458899999999999999999999864
No 175
>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr
Probab=100.00 E-value=3.2e-38 Score=302.34 Aligned_cols=259 Identities=22% Similarity=0.365 Sum_probs=200.8
Q ss_pred ccccccccccccceeEEEEEecCC--CCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCCCCcccc
Q 011360 193 CFASLEKIGSGGCGEVYKAELPGS--NGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQIRHRNILPL 270 (487)
Q Consensus 193 ~~~~~~~lg~G~~g~v~~~~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l 270 (487)
.|.+.+.||.|+||.||+|.+... ++..||+|.+.. .........+..|+.+++.+.||||+++
T Consensus 5 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~--------------~~~~~~~~~~~~e~~~l~~l~h~ni~~~ 70 (269)
T cd05065 5 CVKIEEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKS--------------GYTEKQRRDFLSEASIMGQFDHPNIIHL 70 (269)
T ss_pred HeEEEeEecCCCCCeEEEEEEecCCCCceeEEEEEcCC--------------CCCHHHHHHHHHHHHHHHhCCCcCcceE
Confidence 488899999999999999986432 234699998732 1123345678899999999999999999
Q ss_pred ceEEecCCeeEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCC
Q 011360 271 LAHMVRPDCHLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVLLNDDME 350 (487)
Q Consensus 271 ~~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nill~~~~~ 350 (487)
++++......++||||+++++|.+++.. ....+++..+..++.|++.||.|| |++|++|+||||+||+++.++.
T Consensus 71 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~---~~~~~~~~~~~~i~~~l~~al~~l---H~~g~~H~dl~p~nili~~~~~ 144 (269)
T cd05065 71 EGVVTKSRPVMIITEFMENGALDSFLRQ---NDGQFTVIQLVGMLRGIAAGMKYL---SEMNYVHRDLAARNILVNSNLV 144 (269)
T ss_pred EEEECCCCceEEEEecCCCCcHHHHHhh---CCCCCCHHHHHHHHHHHHHHHHHH---HHCCEeecccChheEEEcCCCc
Confidence 9999999999999999999999999864 245688999999999999999999 6788999999999999999999
Q ss_pred EEEeccCCccccCCCCceee-Eeeec--ccccccCCcccCCCCCCchhHHHHHHHHHHHHHh-CCCCccccCCCCccccH
Q 011360 351 ACISDLGLAMAIPDGYTRVL-ISYVL--GTMAYIAPEYFQQPELSEKCDIFSFGMLLISLVR-GVPSFVFHQNGEEICSP 426 (487)
Q Consensus 351 ~kl~DFg~s~~~~~~~~~~~-~~~~~--gt~~y~aPE~l~~~~~~~~~DvwslG~~l~ellt-g~~pf~~~~~~~~~~~~ 426 (487)
++|+|||++........... ..... .+..|+|||.+.+..++.++||||||+++||+++ |..||..... .
T Consensus 145 ~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~e~l~~g~~p~~~~~~------~ 218 (269)
T cd05065 145 CKVSDFGLSRFLEDDTSDPTYTSSLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSN------Q 218 (269)
T ss_pred EEECCCccccccccCccccccccccCCCcceeecCHhHhccCcccchhhhhhhHHHHHHHhcCCCCCCCCCCH------H
Confidence 99999999876543322111 11111 2457999999998899999999999999999886 9999943221 1
Q ss_pred HHHHHHHhcCCCCCccCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCChHHHHHHHhhhC
Q 011360 427 EWLRKVMNSKNPSRAIDPRLPGNGYEKKMLHVLKIAYICTLHDPEERPNSQYVRCRLSQLL 487 (487)
Q Consensus 427 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~~il~~L~~ll 487 (487)
.....+ ..... ....+ ..+..+.+++.+||..+|++||++.+|+..|++++
T Consensus 219 ~~~~~i-~~~~~-~~~~~--------~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~~ 269 (269)
T cd05065 219 DVINAI-EQDYR-LPPPM--------DCPTALHQLMLDCWQKDRNARPKFGQIVSTLDKMI 269 (269)
T ss_pred HHHHHH-HcCCc-CCCcc--------cCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhhC
Confidence 222222 11111 00111 12345889999999999999999999999998874
No 176
>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,
Probab=100.00 E-value=6.7e-39 Score=315.71 Aligned_cols=242 Identities=24% Similarity=0.354 Sum_probs=188.5
Q ss_pred cccccccceeEEEEEecCCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHH-HhccCCCCCccccceEEec
Q 011360 198 EKIGSGGCGEVYKAELPGSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEII-TASQIRHRNILPLLAHMVR 276 (487)
Q Consensus 198 ~~lg~G~~g~v~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~-~l~~l~hpnIv~l~~~~~~ 276 (487)
+.||.|+||.||+|.. ..+|..||+|++... ..........+..|.. +++.++||||+++++++..
T Consensus 1 ~~lG~G~~g~V~~~~~-~~~~~~~aiK~~~~~------------~~~~~~~~~~~~~e~~~~l~~~~hp~iv~~~~~~~~ 67 (325)
T cd05604 1 KVIGKGSFGKVLLAKR-KLDGKCYAVKVLQKK------------IVLNRKEQKHIMAERNVLLKNVKHPFLVGLHYSFQT 67 (325)
T ss_pred CceeeCCCeEEEEEEE-CCCCCEEEEEEEEHH------------HhhhhhHHHHHHHHHHHHHHhCCCCCCccEEEEEec
Confidence 4689999999999974 468899999988421 1111222334444544 5677899999999999999
Q ss_pred CCeeEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCCEEEecc
Q 011360 277 PDCHLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVLLNDDMEACISDL 356 (487)
Q Consensus 277 ~~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nill~~~~~~kl~DF 356 (487)
++..|+||||+++|+|..++.. ...+++..+..++.|++.||.|| |+.||+||||||+|||++.++.+||+||
T Consensus 68 ~~~~~lv~e~~~~~~L~~~l~~----~~~~~~~~~~~~~~qi~~al~~l---H~~givH~Dlkp~NIll~~~~~~kL~Df 140 (325)
T cd05604 68 TEKLYFVLDFVNGGELFFHLQR----ERSFPEPRARFYAAEIASALGYL---HSINIVYRDLKPENILLDSQGHVVLTDF 140 (325)
T ss_pred CCEEEEEEcCCCCCCHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHH---HHCCeeecCCCHHHeEECCCCCEEEeec
Confidence 9999999999999999988864 45789999999999999999999 7789999999999999999999999999
Q ss_pred CCccccCCCCceeeEeeecccccccCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCccccCCCCccccHHHHHHHHhcC
Q 011360 357 GLAMAIPDGYTRVLISYVLGTMAYIAPEYFQQPELSEKCDIFSFGMLLISLVRGVPSFVFHQNGEEICSPEWLRKVMNSK 436 (487)
Q Consensus 357 g~s~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DvwslG~~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~ 436 (487)
|++......... .....||+.|+|||++.+..++.++|||||||++|+|++|..||...+ ..+.........
T Consensus 141 G~~~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~------~~~~~~~~~~~~ 212 (325)
T cd05604 141 GLCKEGIAQSDT--TTTFCGTPEYLAPEVIRKQPYDNTVDWWCLGAVLYEMLYGLPPFYCRD------VAEMYDNILHKP 212 (325)
T ss_pred CCcccCCCCCCC--cccccCChhhCCHHHHcCCCCCCcCccccccceehhhhcCCCCCCCCC------HHHHHHHHHcCC
Confidence 998753222111 134568999999999999999999999999999999999999994332 122233332211
Q ss_pred CCCCccCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCChHH
Q 011360 437 NPSRAIDPRLPGNGYEKKMLHVLKIAYICTLHDPEERPNSQY 478 (487)
Q Consensus 437 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~~ 478 (487)
. .+.+. .+..+.+++.+||..+|.+||++.+
T Consensus 213 -~--~~~~~--------~~~~~~~ll~~ll~~~p~~R~~~~~ 243 (325)
T cd05604 213 -L--VLRPG--------ASLTAWSILEELLEKDRQRRLGAKE 243 (325)
T ss_pred -c--cCCCC--------CCHHHHHHHHHHhccCHHhcCCCCC
Confidence 1 11111 2245789999999999999999864
No 177
>PHA03211 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=2.8e-38 Score=322.04 Aligned_cols=263 Identities=21% Similarity=0.263 Sum_probs=196.1
Q ss_pred ccccccccccccccceeEEEEEecCCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCCCCcccc
Q 011360 191 EDCFASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQIRHRNILPL 270 (487)
Q Consensus 191 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l 270 (487)
...|.+.+.||.|+||.||++.+. .++..||||... ...+.+|+.++++++|||||++
T Consensus 168 ~~gy~i~~~Lg~G~~G~Vy~a~~~-~~~~~vavK~~~---------------------~~~~~~E~~iL~~L~HpnIv~l 225 (461)
T PHA03211 168 GLGFAIHRALTPGSEGCVFESSHP-DYPQRVVVKAGW---------------------YASSVHEARLLRRLSHPAVLAL 225 (461)
T ss_pred cCCeEEEEEEccCCCeEEEEEEEC-CCCCEEEEeccc---------------------ccCHHHHHHHHHHCCCCCCCcE
Confidence 346999999999999999999754 578899999531 1234579999999999999999
Q ss_pred ceEEecCCeeEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCC
Q 011360 271 LAHMVRPDCHLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVLLNDDME 350 (487)
Q Consensus 271 ~~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nill~~~~~ 350 (487)
++++...+..++|||++ .++|.+++.. ....+++..++.++.|++.||.|| |++||+||||||+|||++.++.
T Consensus 226 ~~~~~~~~~~~lv~e~~-~~~L~~~l~~---~~~~l~~~~~~~i~~qi~~aL~yL---H~~gIvHrDLKP~NILl~~~~~ 298 (461)
T PHA03211 226 LDVRVVGGLTCLVLPKY-RSDLYTYLGA---RLRPLGLAQVTAVARQLLSAIDYI---HGEGIIHRDIKTENVLVNGPED 298 (461)
T ss_pred EEEEEECCEEEEEEEcc-CCCHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHH---HHCCEEECcCCHHHEEECCCCC
Confidence 99999999999999999 5688888753 234689999999999999999999 7789999999999999999999
Q ss_pred EEEeccCCccccCCCCceeeEeeecccccccCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCccccC-CCCccccHHHH
Q 011360 351 ACISDLGLAMAIPDGYTRVLISYVLGTMAYIAPEYFQQPELSEKCDIFSFGMLLISLVRGVPSFVFHQ-NGEEICSPEWL 429 (487)
Q Consensus 351 ~kl~DFg~s~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DvwslG~~l~elltg~~pf~~~~-~~~~~~~~~~~ 429 (487)
+||+|||+++...............||+.|+|||++.+..++.++|||||||++|||++|..|+.... ..........+
T Consensus 299 vkL~DFGla~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~~~~sDvwSlGviL~El~~g~~~lf~~~~~~~~~~~~~~l 378 (461)
T PHA03211 299 ICLGDFGAACFARGSWSTPFHYGIAGTVDTNAPEVLAGDPYTPSVDIWSAGLVIFEAAVHTASLFSASRGDERRPYDAQI 378 (461)
T ss_pred EEEcccCCceecccccccccccccCCCcCCcCHHHHcCCCCCchHHHHHHHHHHHHHHHcCCCcccCCcccccCCcHHHH
Confidence 99999999976543322222234569999999999999999999999999999999999876543221 11111111112
Q ss_pred HHHHhcCCC-CCccC--------------------CCCCCCC---cHHHHHHHHHHHhhccCCCCCCCCChHHHHHH
Q 011360 430 RKVMNSKNP-SRAID--------------------PRLPGNG---YEKKMLHVLKIAYICTLHDPEERPNSQYVRCR 482 (487)
Q Consensus 430 ~~~~~~~~~-~~~~~--------------------~~~~~~~---~~~~~~~l~~li~~cl~~~P~~RPs~~~il~~ 482 (487)
...+..... ...+. +...... .......+.+++.+||+.||.+|||+.|+++.
T Consensus 379 ~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~DP~~RPsa~elL~h 455 (461)
T PHA03211 379 LRIIRQAQVHVDEFPQHAGSRLVSQYRHRAARNRRPAYTRPAWTRYYKLDLDVEYLVCRALTFDGARRPSAAELLRL 455 (461)
T ss_pred HHHHHhhccccccCCCCcchHHHHHHHhhhhcccCCccCCcchhhhccccchHHHHHHHHcccChhhCcCHHHHhhC
Confidence 222211110 00000 0000000 01123468899999999999999999999863
No 178
>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells
Probab=100.00 E-value=5.6e-38 Score=300.71 Aligned_cols=258 Identities=24% Similarity=0.327 Sum_probs=190.8
Q ss_pred cccccccceeEEEEEecC-CCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCCCCccccceEEec
Q 011360 198 EKIGSGGCGEVYKAELPG-SNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQIRHRNILPLLAHMVR 276 (487)
Q Consensus 198 ~~lg~G~~g~v~~~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~ 276 (487)
+.||+|+||.||+|.+.. .++..+|+|.+... ........+.+|+.+++.++||||+++++++.+
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~--------------~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~ 66 (269)
T cd05087 1 KEIGNGWFGKVILGEVNSGYTPAQVVVKELRVS--------------ASVQEQMKFLEEAQPYRSLQHSNLLQCLGQCTE 66 (269)
T ss_pred CcccccCCceEEEEEEcCCCCceEEEEEecCCC--------------CChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcC
Confidence 368999999999997642 35567999987321 112233467889999999999999999999999
Q ss_pred CCeeEEEEEecCCCCHHHHHhhhhc-CCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCCEEEec
Q 011360 277 PDCHLLVYEFMKNGSLQDILDDVSR-GRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVLLNDDMEACISD 355 (487)
Q Consensus 277 ~~~~~lv~E~~~~gsL~~~l~~~~~-~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nill~~~~~~kl~D 355 (487)
....++||||+++|+|.+++..... .....++..+..++.|++.||.|| |+.|++|+||||+||+++.++.+||+|
T Consensus 67 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~l---H~~~i~H~dlkp~nil~~~~~~~kL~d 143 (269)
T cd05087 67 VTPYLLVMEFCPLGDLKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHL---HKNNFIHSDLALRNCLLTADLTVKIGD 143 (269)
T ss_pred CCCcEEEEECCCCCcHHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHH---HHCCEeccccCcceEEEcCCCcEEECC
Confidence 9999999999999999999975332 223456778889999999999999 678899999999999999999999999
Q ss_pred cCCccccCCCCceeeEeeecccccccCCcccCCC-------CCCchhHHHHHHHHHHHHHh-CCCCccccCCCCccccHH
Q 011360 356 LGLAMAIPDGYTRVLISYVLGTMAYIAPEYFQQP-------ELSEKCDIFSFGMLLISLVR-GVPSFVFHQNGEEICSPE 427 (487)
Q Consensus 356 Fg~s~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~-------~~~~~~DvwslG~~l~ellt-g~~pf~~~~~~~~~~~~~ 427 (487)
||.+................++..|+|||++.+. .++.++||||||+++|||++ |..||...... +
T Consensus 144 fg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~------~ 217 (269)
T cd05087 144 YGLSHNKYKEDYYVTPDQLWVPLRWIAPELVDEVHGNLLVVDQTKESNVWSLGVTIWELFELGSQPYRHLSDE------Q 217 (269)
T ss_pred ccccccccCcceeecCCCcCCcccccCHhHhccccccccccCCCccchhHHHHHHHHHHHhCCCCCCCCCChH------H
Confidence 9998754433222222234567889999988642 35789999999999999996 99999543221 1
Q ss_pred HHHHHHhcCCCCCccCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCChHHHHHHHh
Q 011360 428 WLRKVMNSKNPSRAIDPRLPGNGYEKKMLHVLKIAYICTLHDPEERPNSQYVRCRLS 484 (487)
Q Consensus 428 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~~il~~L~ 484 (487)
........ ......++.+... ....+.+++..|| .+|++|||+.+|...|.
T Consensus 218 ~~~~~~~~-~~~~~~~~~~~~~----~~~~~~~l~~~c~-~~P~~Rpt~~~l~~~l~ 268 (269)
T cd05087 218 VLTYTVRE-QQLKLPKPRLKLP----LSDRWYEVMQFCW-LQPEQRPSAEEVHLLLS 268 (269)
T ss_pred HHHHHhhc-ccCCCCCCccCCC----CChHHHHHHHHHh-cCcccCCCHHHHHHHhc
Confidence 11111111 1111111211111 2234778889999 58999999999998874
No 179
>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows
Probab=100.00 E-value=2e-38 Score=301.47 Aligned_cols=250 Identities=25% Similarity=0.339 Sum_probs=196.6
Q ss_pred ccccccccccccceeEEEEEecCCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCCCCccccce
Q 011360 193 CFASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQIRHRNILPLLA 272 (487)
Q Consensus 193 ~~~~~~~lg~G~~g~v~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~ 272 (487)
+|.+.+.||.|+||.||++.+. ++..+|+|.+... ......+.+|+.+++.++||||+++++
T Consensus 5 ~~~~~~~lg~G~~~~v~~~~~~--~~~~~~iK~~~~~----------------~~~~~~~~~e~~~l~~l~~~~i~~~~~ 66 (256)
T cd05059 5 ELTFLKELGSGQFGVVHLGKWR--GKIDVAIKMIREG----------------AMSEDDFIEEAKVMMKLSHPNLVQLYG 66 (256)
T ss_pred HcchhhhhccCCCceEEEeEec--CCccEEEEEeccC----------------CCCHHHHHHHHHHHHhCCCCCEEEEEE
Confidence 4888999999999999999764 5668999986321 011235677999999999999999999
Q ss_pred EEecCCeeEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCCEE
Q 011360 273 HMVRPDCHLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVLLNDDMEAC 352 (487)
Q Consensus 273 ~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nill~~~~~~k 352 (487)
++...+..|+||||+++++|.+++.. ....+++..+..++.|++.||+|| |+.|++||||||+||+++.++.+|
T Consensus 67 ~~~~~~~~~lv~e~~~~~~L~~~l~~---~~~~~~~~~~~~i~~qi~~~l~~l---H~~~i~H~dl~p~ni~i~~~~~~k 140 (256)
T cd05059 67 VCTKQRPIFIVTEYMANGCLLNYLRE---RKGKLGTEWLLDMCSDVCEAMEYL---ESNGFIHRDLAARNCLVGEDNVVK 140 (256)
T ss_pred EEcCCCceEEEEecCCCCCHHHHHHh---cccCCCHHHHHHHHHHHHHHHHHH---HHCCcccccccHhhEEECCCCcEE
Confidence 99999999999999999999999864 234689999999999999999999 778899999999999999999999
Q ss_pred EeccCCccccCCCCceeeEeeecccccccCCcccCCCCCCchhHHHHHHHHHHHHHh-CCCCccccCCCCccccHHHHHH
Q 011360 353 ISDLGLAMAIPDGYTRVLISYVLGTMAYIAPEYFQQPELSEKCDIFSFGMLLISLVR-GVPSFVFHQNGEEICSPEWLRK 431 (487)
Q Consensus 353 l~DFg~s~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DvwslG~~l~ellt-g~~pf~~~~~~~~~~~~~~~~~ 431 (487)
|+|||+++......... .....++..|+|||.+.+..++.++||||||+++|++++ |..||....+ .+....
T Consensus 141 l~dfg~~~~~~~~~~~~-~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~------~~~~~~ 213 (256)
T cd05059 141 VSDFGLARYVLDDQYTS-SQGTKFPVKWAPPEVFDYSRFSSKSDVWSFGVLMWEVFSEGKMPYERFSN------SEVVES 213 (256)
T ss_pred ECCcccceecccccccc-cCCCCCCccccCHHHhccCCCCchhhHHHHHHHHHHHhccCCCCCCCCCH------HHHHHH
Confidence 99999987654322111 111223457999999998899999999999999999999 7999954322 112222
Q ss_pred HHhcCCCCCccCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCChHHHHHHH
Q 011360 432 VMNSKNPSRAIDPRLPGNGYEKKMLHVLKIAYICTLHDPEERPNSQYVRCRL 483 (487)
Q Consensus 432 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~~il~~L 483 (487)
......+ ..+. ..+..+.+++.+||..+|++|||+.++++.|
T Consensus 214 ~~~~~~~------~~~~----~~~~~~~~li~~cl~~~p~~Rpt~~~~l~~l 255 (256)
T cd05059 214 VSAGYRL------YRPK----LAPTEVYTIMYSCWHEKPEDRPAFKKLLSQL 255 (256)
T ss_pred HHcCCcC------CCCC----CCCHHHHHHHHHHhcCChhhCcCHHHHHHHh
Confidence 2211111 1111 1235699999999999999999999999886
No 180
>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1. Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.
Probab=100.00 E-value=3e-38 Score=307.15 Aligned_cols=258 Identities=24% Similarity=0.338 Sum_probs=197.7
Q ss_pred cccccccccccccceeEEEEEecCCCC--ceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccC-CCCCcc
Q 011360 192 DCFASLEKIGSGGCGEVYKAELPGSNG--KMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQI-RHRNIL 268 (487)
Q Consensus 192 ~~~~~~~~lg~G~~g~v~~~~~~~~~~--~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpnIv 268 (487)
++|.+.+.||.|+||.||+|.... ++ ..+++|.+.. .........+.+|+.++.++ +||||+
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~-~~~~~~~~ik~~~~--------------~~~~~~~~~~~~E~~~l~~l~~hp~iv 66 (297)
T cd05089 2 EDIKFEDVIGEGNFGQVIRAMIKK-DGLKMNAAIKMLKE--------------FASENDHRDFAGELEVLCKLGHHPNII 66 (297)
T ss_pred ccceeeeeecCCCcceEEEEEecC-CCCcceeEEEEccc--------------cCCHHHHHHHHHHHHHHHhhcCCCchh
Confidence 358899999999999999997643 33 3468887632 11222345678899999999 799999
Q ss_pred ccceEEecCCeeEEEEEecCCCCHHHHHhhhhc------------CCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeec
Q 011360 269 PLLAHMVRPDCHLLVYEFMKNGSLQDILDDVSR------------GRRELDWPSRHRIALGVASGLEYLHMYHSASIIHG 336 (487)
Q Consensus 269 ~l~~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~------------~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~ 336 (487)
++++++...+..+++|||+++++|.+++..... ....+++..+..++.|++.||+|| |++|++||
T Consensus 67 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~l---H~~~ivH~ 143 (297)
T cd05089 67 NLLGACENRGYLYIAIEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYL---SEKQFIHR 143 (297)
T ss_pred heEEEEccCCcceEEEEecCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHH---HHCCcccC
Confidence 999999999999999999999999999964211 123588899999999999999999 67889999
Q ss_pred CCCCCCEEeCCCCCEEEeccCCccccCCCCceeeEeeecccccccCCcccCCCCCCchhHHHHHHHHHHHHHh-CCCCcc
Q 011360 337 DIKPRNVLLNDDMEACISDLGLAMAIPDGYTRVLISYVLGTMAYIAPEYFQQPELSEKCDIFSFGMLLISLVR-GVPSFV 415 (487)
Q Consensus 337 Dlkp~Nill~~~~~~kl~DFg~s~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DvwslG~~l~ellt-g~~pf~ 415 (487)
||||+||+++.++.+||+|||++......... .....+..|+|||++.+..++.++|||||||++|||++ |..||.
T Consensus 144 dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~~---~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~el~t~g~~pf~ 220 (297)
T cd05089 144 DLAARNVLVGENLASKIADFGLSRGEEVYVKK---TMGRLPVRWMAIESLNYSVYTTKSDVWSFGVLLWEIVSLGGTPYC 220 (297)
T ss_pred cCCcceEEECCCCeEEECCcCCCccccceecc---CCCCcCccccCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCCC
Confidence 99999999999999999999998643221111 11223567999999998889999999999999999997 999994
Q ss_pred ccCCCCccccHHHHHHHHhcCCCCCccCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCChHHHHHHHhhh
Q 011360 416 FHQNGEEICSPEWLRKVMNSKNPSRAIDPRLPGNGYEKKMLHVLKIAYICTLHDPEERPNSQYVRCRLSQL 486 (487)
Q Consensus 416 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~~il~~L~~l 486 (487)
... ..+..........+ ..+. ..+..+.+++.+||+.+|.+|||+.++++.|+.+
T Consensus 221 ~~~------~~~~~~~~~~~~~~------~~~~----~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~ 275 (297)
T cd05089 221 GMT------CAELYEKLPQGYRM------EKPR----NCDDEVYELMRQCWRDRPYERPPFAQISVQLSRM 275 (297)
T ss_pred CCC------HHHHHHHHhcCCCC------CCCC----CCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence 332 12222222211111 1111 1235688999999999999999999999998865
No 181
>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=100.00 E-value=1.9e-38 Score=303.48 Aligned_cols=255 Identities=25% Similarity=0.381 Sum_probs=198.1
Q ss_pred cccccccccccccceeEEEEEecCCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCCCCccccc
Q 011360 192 DCFASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQIRHRNILPLL 271 (487)
Q Consensus 192 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~ 271 (487)
++|.+.+.||.|+||.||+|+. ..++..||+|++... .......+.+|+.++..++||||++++
T Consensus 9 ~~y~~~~~lg~g~~g~vy~~~~-~~~~~~~aik~~~~~---------------~~~~~~~~~~e~~~l~~~~h~~ii~~~ 72 (267)
T cd06646 9 HDYELIQRVGSGTYGDVYKARN-LHTGELAAVKIIKLE---------------PGDDFSLIQQEIFMVKECKHCNIVAYF 72 (267)
T ss_pred hhcchhheeecCCCeEEEEEEE-CCCCeEEEEEEEecC---------------ccchHHHHHHHHHHHHhcCCCCeeeee
Confidence 4699999999999999999975 457889999987421 111234567899999999999999999
Q ss_pred eEEecCCeeEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCCE
Q 011360 272 AHMVRPDCHLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVLLNDDMEA 351 (487)
Q Consensus 272 ~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nill~~~~~~ 351 (487)
+++...+..++||||+++++|.+++.. ...+++..+..++.|++.||.|| |+.||+||||+|+||+++.++.+
T Consensus 73 ~~~~~~~~~~iv~e~~~~~~L~~~~~~----~~~~~~~~~~~~~~qi~~~l~~l---H~~~i~H~dl~p~nill~~~~~~ 145 (267)
T cd06646 73 GSYLSREKLWICMEYCGGGSLQDIYHV----TGPLSELQIAYVCRETLQGLAYL---HSKGKMHRDIKGANILLTDNGDV 145 (267)
T ss_pred EEEEeCCEEEEEEeCCCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHH---HHCCccccCCCHHHEEECCCCCE
Confidence 999999999999999999999998864 35688999999999999999999 67889999999999999999999
Q ss_pred EEeccCCccccCCCCceeeEeeecccccccCCcccC---CCCCCchhHHHHHHHHHHHHHhCCCCccccCCCCccccHHH
Q 011360 352 CISDLGLAMAIPDGYTRVLISYVLGTMAYIAPEYFQ---QPELSEKCDIFSFGMLLISLVRGVPSFVFHQNGEEICSPEW 428 (487)
Q Consensus 352 kl~DFg~s~~~~~~~~~~~~~~~~gt~~y~aPE~l~---~~~~~~~~DvwslG~~l~elltg~~pf~~~~~~~~~~~~~~ 428 (487)
+|+|||++......... .....+++.|+|||.+. ...++.++|+||||+++|+|++|..||....+....
T Consensus 146 ~l~dfg~~~~~~~~~~~--~~~~~~~~~y~~PE~~~~~~~~~~~~~~Dvws~G~il~el~~g~~p~~~~~~~~~~----- 218 (267)
T cd06646 146 KLADFGVAAKITATIAK--RKSFIGTPYWMAPEVAAVEKNGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRAL----- 218 (267)
T ss_pred EECcCccceeecccccc--cCccccCccccCHhHcccccCCCCcchhhHHHHHHHHHHHHhCCCCccccchhhhh-----
Confidence 99999999765432211 12345889999999874 445788999999999999999999998433221110
Q ss_pred HHHHHhcCCCCCccCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCChHHHHHHH
Q 011360 429 LRKVMNSKNPSRAIDPRLPGNGYEKKMLHVLKIAYICTLHDPEERPNSQYVRCRL 483 (487)
Q Consensus 429 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~~il~~L 483 (487)
.... .... ..+..+. ....+..+.+++.+||..+|++|||+++|++.|
T Consensus 219 -~~~~-~~~~---~~~~~~~--~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~l 266 (267)
T cd06646 219 -FLMS-KSNF---QPPKLKD--KTKWSSTFHNFVKISLTKNPKKRPTAERLLTHL 266 (267)
T ss_pred -eeee-cCCC---CCCCCcc--ccccCHHHHHHHHHHhhCChhhCcCHHHHhcCC
Confidence 0000 0100 0111111 112345788999999999999999999998643
No 182
>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a
Probab=100.00 E-value=2.1e-38 Score=311.85 Aligned_cols=244 Identities=23% Similarity=0.309 Sum_probs=192.0
Q ss_pred cccccccccccceeEEEEEecCCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCC-CCCccccce
Q 011360 194 FASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQIR-HRNILPLLA 272 (487)
Q Consensus 194 ~~~~~~lg~G~~g~v~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-hpnIv~l~~ 272 (487)
|...+.||.|+||.||+|.. ..+++.||+|++.. ...........+..|..++..+. ||+|+++++
T Consensus 2 f~~~~~lg~G~~g~Vy~~~~-~~~~~~vaiK~~~~------------~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~ 68 (323)
T cd05615 2 FNFLMVLGKGSFGKVMLAER-KGTDELYAIKILKK------------DVVIQDDDVECTMVEKRVLALQDKPPFLTQLHS 68 (323)
T ss_pred ceEEEEEEecCCeEEEEEEE-CCCCCEEEEEEEEH------------HHhhhhhHHHHHHHHHHHHHhccCCCchhheee
Confidence 67788999999999999975 46789999998842 11112234456677888888774 577888999
Q ss_pred EEecCCeeEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCCEE
Q 011360 273 HMVRPDCHLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVLLNDDMEAC 352 (487)
Q Consensus 273 ~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nill~~~~~~k 352 (487)
++...+.+|+||||+++|+|.+++.. ...+++..+..++.|++.||.|| |++||+||||||+|||++.++.+|
T Consensus 69 ~~~~~~~~~lv~Ey~~~g~L~~~i~~----~~~l~~~~~~~i~~qi~~al~~l---H~~~ivHrDikp~Nill~~~~~ik 141 (323)
T cd05615 69 CFQTVDRLYFVMEYVNGGDLMYHIQQ----VGKFKEPQAVFYAAEISVGLFFL---HRRGIIYRDLKLDNVMLDSEGHIK 141 (323)
T ss_pred EEecCCEEEEEEcCCCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHH---HHCCeeccCCCHHHeEECCCCCEE
Confidence 99999999999999999999998864 45689999999999999999999 678899999999999999999999
Q ss_pred EeccCCccccCCCCceeeEeeecccccccCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCccccCCCCccccHHHHHHH
Q 011360 353 ISDLGLAMAIPDGYTRVLISYVLGTMAYIAPEYFQQPELSEKCDIFSFGMLLISLVRGVPSFVFHQNGEEICSPEWLRKV 432 (487)
Q Consensus 353 l~DFg~s~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DvwslG~~l~elltg~~pf~~~~~~~~~~~~~~~~~~ 432 (487)
|+|||++........ ......||+.|+|||++.+..++.++|||||||++|+|++|..||..... .......
T Consensus 142 L~Dfg~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~------~~~~~~i 213 (323)
T cd05615 142 IADFGMCKEHMVDGV--TTRTFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDE------DELFQSI 213 (323)
T ss_pred EeccccccccCCCCc--cccCccCCccccCHHHHcCCCCCCccchhhhHHHHHHHHhCCCCCCCCCH------HHHHHHH
Confidence 999999875432221 12345689999999999988999999999999999999999999954321 1222223
Q ss_pred HhcCCCCCccCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCCh
Q 011360 433 MNSKNPSRAIDPRLPGNGYEKKMLHVLKIAYICTLHDPEERPNS 476 (487)
Q Consensus 433 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~ 476 (487)
... .. ..+.. .+..+.+++.+||+.+|.+|++.
T Consensus 214 ~~~-~~------~~p~~----~~~~~~~li~~~l~~~p~~R~~~ 246 (323)
T cd05615 214 MEH-NV------SYPKS----LSKEAVSICKGLMTKHPSKRLGC 246 (323)
T ss_pred HhC-CC------CCCcc----CCHHHHHHHHHHcccCHhhCCCC
Confidence 221 11 11111 22457899999999999999985
No 183
>PRK13184 pknD serine/threonine-protein kinase; Reviewed
Probab=100.00 E-value=2e-38 Score=337.30 Aligned_cols=265 Identities=23% Similarity=0.292 Sum_probs=201.4
Q ss_pred cccccccccccccceeEEEEEecCCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCCCCccccc
Q 011360 192 DCFASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQIRHRNILPLL 271 (487)
Q Consensus 192 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~ 271 (487)
++|.+.+.||.|+||.||+|.. ..+++.||+|++.... .........+.+|+.+++.++||||++++
T Consensus 2 grYeIi~~LGkGgfG~VYlA~d-~~tg~~VAIK~I~~~l------------~~~e~~~~rflrEi~ILs~L~HPNIVkl~ 68 (932)
T PRK13184 2 QRYDIIRLIGKGGMGEVYLAYD-PVCSRRVALKKIREDL------------SENPLLKKRFLREAKIAADLIHPGIVPVY 68 (932)
T ss_pred CCeEEEEEEecCCCEEEEEEEE-CCCCcEEEEEEECccc------------ccCHHHHHHHHHHHHHHHhCCCcCcCeEE
Confidence 3689999999999999999974 5678999999884211 11123445788999999999999999999
Q ss_pred eEEecCCeeEEEEEecCCCCHHHHHhhhhcC-------CCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEE
Q 011360 272 AHMVRPDCHLLVYEFMKNGSLQDILDDVSRG-------RRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVL 344 (487)
Q Consensus 272 ~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~-------~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nil 344 (487)
+++.+++..|++|||++||+|.+++...... ....++..+..++.|++.||+|| |++||+||||||+||+
T Consensus 69 ~v~~d~~~lyLVMEY~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yL---Hs~GIIHRDLKPeNIL 145 (932)
T PRK13184 69 SICSDGDPVYYTMPYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYV---HSKGVLHRDLKPDNIL 145 (932)
T ss_pred EEEeeCCEEEEEEEcCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHH---HHCCccccCCchheEE
Confidence 9999999999999999999999998753211 23456677889999999999999 6778999999999999
Q ss_pred eCCCCCEEEeccCCccccCCCCc----------------eeeEeeecccccccCCcccCCCCCCchhHHHHHHHHHHHHH
Q 011360 345 LNDDMEACISDLGLAMAIPDGYT----------------RVLISYVLGTMAYIAPEYFQQPELSEKCDIFSFGMLLISLV 408 (487)
Q Consensus 345 l~~~~~~kl~DFg~s~~~~~~~~----------------~~~~~~~~gt~~y~aPE~l~~~~~~~~~DvwslG~~l~ell 408 (487)
++.++.++|+|||++........ ........||+.|+|||++.+..++.++|||||||++|||+
T Consensus 146 Ld~dg~vKLiDFGLAk~i~~~~~~~~~l~~~~~~s~~s~~t~~g~~vGT~~YmAPE~l~g~~~S~kSDIWSLGVILyELL 225 (932)
T PRK13184 146 LGLFGEVVILDWGAAIFKKLEEEDLLDIDVDERNICYSSMTIPGKIVGTPDYMAPERLLGVPASESTDIYALGVILYQML 225 (932)
T ss_pred EcCCCCEEEEecCcceecccccccccccccccccccccccccCCCCCCCCCCCCHHHhcCCCCCcHhHHHHHHHHHHHHH
Confidence 99999999999999976521110 00012246899999999999999999999999999999999
Q ss_pred hCCCCccccCCCCccccHHHHHHHHhcCCCCCccCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCC-ChHHHHHHHhhh
Q 011360 409 RGVPSFVFHQNGEEICSPEWLRKVMNSKNPSRAIDPRLPGNGYEKKMLHVLKIAYICTLHDPEERP-NSQYVRCRLSQL 486 (487)
Q Consensus 409 tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RP-s~~~il~~L~~l 486 (487)
||..||......... .... ...+... ......+..+.+++.+||+.||++|| +++++++.|+.+
T Consensus 226 TG~~PF~~~~~~ki~-----~~~~--i~~P~~~-------~p~~~iP~~L~~LI~rcL~~DP~kR~ss~eeLl~~Le~~ 290 (932)
T PRK13184 226 TLSFPYRRKKGRKIS-----YRDV--ILSPIEV-------APYREIPPFLSQIAMKALAVDPAERYSSVQELKQDLEPH 290 (932)
T ss_pred HCCCCCCCcchhhhh-----hhhh--ccChhhc-------cccccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence 999999543221100 0000 0111110 01112335688999999999999996 566677776654
No 184
>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.
Probab=100.00 E-value=2.4e-38 Score=311.27 Aligned_cols=241 Identities=24% Similarity=0.378 Sum_probs=186.8
Q ss_pred cccccccceeEEEEEecCCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHH-HHhccCCCCCccccceEEec
Q 011360 198 EKIGSGGCGEVYKAELPGSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEI-ITASQIRHRNILPLLAHMVR 276 (487)
Q Consensus 198 ~~lg~G~~g~v~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~-~~l~~l~hpnIv~l~~~~~~ 276 (487)
+.||.|+||.||+|+. ..++..||+|++... ..........+..|. .+++.++||||+++++++.+
T Consensus 1 ~~lg~G~~g~Vy~~~~-~~~~~~~aiK~~~~~------------~~~~~~~~~~~~~e~~~~l~~~~h~~iv~~~~~~~~ 67 (321)
T cd05603 1 KVIGKGSFGKVLLAKR-KSDGSFYAVKVLQKK------------TILKKKEQNHIMAERNVLLKNLKHPFLVGLHYSFQT 67 (321)
T ss_pred CeeeeCCCEEEEEEEE-CCCCCEEEEEEEEHH------------HHHHhhHHHHHHHHHHHHHHhCCCCCccceeeEEEc
Confidence 3689999999999975 467899999987321 111122233444454 46788999999999999999
Q ss_pred CCeeEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCCEEEecc
Q 011360 277 PDCHLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVLLNDDMEACISDL 356 (487)
Q Consensus 277 ~~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nill~~~~~~kl~DF 356 (487)
.+..|+||||+++|+|...+.. ...+++..+..++.|++.||.|| |+.||+||||||+||+++.++.+||+||
T Consensus 68 ~~~~~lv~e~~~~~~L~~~l~~----~~~~~~~~~~~~~~qi~~~L~~l---H~~~ivH~Dlkp~NIll~~~~~~kl~Df 140 (321)
T cd05603 68 AEKLYFVLDYVNGGELFFHLQR----ERCFLEPRARFYAAEVASAIGYL---HSLNIIYRDLKPENILLDSQGHVVLTDF 140 (321)
T ss_pred CCEEEEEEcCCCCCCHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHH---HHCCeEeccCCHHHeEECCCCCEEEccC
Confidence 9999999999999999888864 45688889999999999999999 7788999999999999999999999999
Q ss_pred CCccccCCCCceeeEeeecccccccCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCccccCCCCccccHHHHHHHHhcC
Q 011360 357 GLAMAIPDGYTRVLISYVLGTMAYIAPEYFQQPELSEKCDIFSFGMLLISLVRGVPSFVFHQNGEEICSPEWLRKVMNSK 436 (487)
Q Consensus 357 g~s~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DvwslG~~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~ 436 (487)
|++........ ......||+.|+|||++.+..++.++|||||||++|+|++|..||...+ ...........
T Consensus 141 g~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~------~~~~~~~i~~~- 211 (321)
T cd05603 141 GLCKEGVEPEE--TTSTFCGTPEYLAPEVLRKEPYDRTVDWWCLGAVLYEMLYGLPPFYSRD------VSQMYDNILHK- 211 (321)
T ss_pred CCCccCCCCCC--ccccccCCcccCCHHHhcCCCCCCcCcccccchhhhhhhcCCCCCCCCC------HHHHHHHHhcC-
Confidence 99875322211 1234568999999999998899999999999999999999999994332 12222222221
Q ss_pred CCCCccCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCChH
Q 011360 437 NPSRAIDPRLPGNGYEKKMLHVLKIAYICTLHDPEERPNSQ 477 (487)
Q Consensus 437 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~ 477 (487)
.. .++.. ....+.+++.+||+.+|.+||++.
T Consensus 212 ~~------~~~~~----~~~~~~~li~~~l~~~p~~R~~~~ 242 (321)
T cd05603 212 PL------QLPGG----KTVAACDLLVGLLHKDQRRRLGAK 242 (321)
T ss_pred CC------CCCCC----CCHHHHHHHHHHccCCHhhcCCCC
Confidence 11 11211 224588999999999999999864
No 185
>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=3.4e-38 Score=311.93 Aligned_cols=265 Identities=24% Similarity=0.321 Sum_probs=204.1
Q ss_pred hhccccccccccccccceeEEEEEecC------CCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccC
Q 011360 189 KKEDCFASLEKIGSGGCGEVYKAELPG------SNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQI 262 (487)
Q Consensus 189 ~~~~~~~~~~~lg~G~~g~v~~~~~~~------~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l 262 (487)
....+|.+.+.||.|+||.||+++... ..+..||+|.+.. .........+.+|+.++.++
T Consensus 9 ~~~~~~~i~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~--------------~~~~~~~~~~~~E~~~l~~l 74 (334)
T cd05100 9 LSRTRLTLGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKD--------------DATDKDLSDLVSEMEMMKMI 74 (334)
T ss_pred cCHhHeeecceeccccCCcEEEEEEeccCCccCCcceeEEEEEccc--------------ccCHHHHHHHHHHHHHHHhh
Confidence 334569999999999999999997532 1224689997632 12233456788899999999
Q ss_pred -CCCCccccceEEecCCeeEEEEEecCCCCHHHHHhhhhc------------CCCCCChHHHHHHHHHHHHHHHHHHhcC
Q 011360 263 -RHRNILPLLAHMVRPDCHLLVYEFMKNGSLQDILDDVSR------------GRRELDWPSRHRIALGVASGLEYLHMYH 329 (487)
Q Consensus 263 -~hpnIv~l~~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~------------~~~~l~~~~~~~i~~qi~~~L~~Lh~~h 329 (487)
+||||+++++++...+..+++|||+++|+|.+++..... ....+++..+..++.|++.||.|| |
T Consensus 75 ~~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~L---H 151 (334)
T cd05100 75 GKHKNIINLLGACTQDGPLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYL---A 151 (334)
T ss_pred cCCCCeeeeeEEEccCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHH---H
Confidence 899999999999999999999999999999999975321 124578889999999999999999 7
Q ss_pred CCCeeecCCCCCCEEeCCCCCEEEeccCCccccCCCCceeeEeeecccccccCCcccCCCCCCchhHHHHHHHHHHHHHh
Q 011360 330 SASIIHGDIKPRNVLLNDDMEACISDLGLAMAIPDGYTRVLISYVLGTMAYIAPEYFQQPELSEKCDIFSFGMLLISLVR 409 (487)
Q Consensus 330 ~~givH~Dlkp~Nill~~~~~~kl~DFg~s~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DvwslG~~l~ellt 409 (487)
++|++||||||+||+++.++.+||+|||+++...............++..|+|||++.+..++.++||||||+++|+|++
T Consensus 152 ~~givH~dlkp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~ 231 (334)
T cd05100 152 SQKCIHRDLAARNVLVTEDNVMKIADFGLARDVHNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFT 231 (334)
T ss_pred HCCeeccccccceEEEcCCCcEEECCcccceecccccccccccCCCcCceEcCHHHhccCCcCchhhhHHHHHHHHHHHh
Confidence 78999999999999999999999999999876543322111122334568999999999899999999999999999998
Q ss_pred -CCCCccccCCCCccccHHHHHHHHhcCCCCCccCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCChHHHHHHHhhh
Q 011360 410 -GVPSFVFHQNGEEICSPEWLRKVMNSKNPSRAIDPRLPGNGYEKKMLHVLKIAYICTLHDPEERPNSQYVRCRLSQL 486 (487)
Q Consensus 410 -g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~~il~~L~~l 486 (487)
|..||... ...+..........+ . .+. ..+..+.+++.+||+.+|++|||+.+++..|+++
T Consensus 232 ~g~~p~~~~------~~~~~~~~~~~~~~~-~-----~~~----~~~~~l~~li~~cl~~~p~~Rps~~ell~~l~~~ 293 (334)
T cd05100 232 LGGSPYPGI------PVEELFKLLKEGHRM-D-----KPA----NCTHELYMIMRECWHAVPSQRPTFKQLVEDLDRV 293 (334)
T ss_pred cCCCCCCCC------CHHHHHHHHHcCCCC-C-----CCC----CCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHH
Confidence 78888432 222333322222111 1 111 1234688999999999999999999999999875
No 186
>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=2.6e-38 Score=307.42 Aligned_cols=250 Identities=26% Similarity=0.402 Sum_probs=199.2
Q ss_pred cccccccccccccceeEEEEEecCCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCCCCccccc
Q 011360 192 DCFASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQIRHRNILPLL 271 (487)
Q Consensus 192 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~ 271 (487)
..|.+.+.||.|++|.||+|. +..++..|++|.+... .......+.+|+.+++.+.||||++++
T Consensus 20 ~~y~~~~~lg~g~~~~v~~~~-~~~~~~~v~ik~~~~~---------------~~~~~~~~~~e~~~l~~~~h~~v~~~~ 83 (296)
T cd06654 20 KKYTRFEKIGQGASGTVYTAM-DVATGQEVAIRQMNLQ---------------QQPKKELIINEILVMRENKNPNIVNYL 83 (296)
T ss_pred cceeeEEEecCCCCeEEEEEE-ECCCCcEEEEEEEecC---------------CcchHHHHHHHHHHHHhCCCCCEeeEE
Confidence 469999999999999999996 4467889999987421 112235677899999999999999999
Q ss_pred eEEecCCeeEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCCE
Q 011360 272 AHMVRPDCHLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVLLNDDMEA 351 (487)
Q Consensus 272 ~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nill~~~~~~ 351 (487)
+.+......|+||||+++++|.+++.. ..+++..+..++.|++.||.|| |+.||+||||||+||+++.++.+
T Consensus 84 ~~~~~~~~~~lv~e~~~~~~L~~~~~~-----~~~~~~~~~~i~~ql~~aL~~L---H~~gi~H~dLkp~Nill~~~~~~ 155 (296)
T cd06654 84 DSYLVGDELWVVMEYLAGGSLTDVVTE-----TCMDEGQIAAVCRECLQALEFL---HSNQVIHRDIKSDNILLGMDGSV 155 (296)
T ss_pred EEEEeCCEEEEeecccCCCCHHHHHHh-----cCCCHHHHHHHHHHHHHHHHHH---HHCCcccCCCCHHHEEEcCCCCE
Confidence 999999999999999999999999863 4578889999999999999999 77889999999999999999999
Q ss_pred EEeccCCccccCCCCceeeEeeecccccccCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCccccCCCCccccHHHHHH
Q 011360 352 CISDLGLAMAIPDGYTRVLISYVLGTMAYIAPEYFQQPELSEKCDIFSFGMLLISLVRGVPSFVFHQNGEEICSPEWLRK 431 (487)
Q Consensus 352 kl~DFg~s~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DvwslG~~l~elltg~~pf~~~~~~~~~~~~~~~~~ 431 (487)
+|+|||++......... .....+++.|+|||.+.+..++.++|||||||++|+|++|..||...... .....
T Consensus 156 kl~dfg~~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~~l~~g~~pf~~~~~~------~~~~~ 227 (296)
T cd06654 156 KLTDFGFCAQITPEQSK--RSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPL------RALYL 227 (296)
T ss_pred EECccccchhccccccc--cCcccCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCCCCCHH------HhHHH
Confidence 99999998765432211 12345889999999999888999999999999999999999999443221 11111
Q ss_pred HHhcCCCCCccCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCChHHHHH
Q 011360 432 VMNSKNPSRAIDPRLPGNGYEKKMLHVLKIAYICTLHDPEERPNSQYVRC 481 (487)
Q Consensus 432 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~~il~ 481 (487)
......+... ........+.+++.+||..+|++|||+.+|++
T Consensus 228 ~~~~~~~~~~--------~~~~~~~~l~~li~~~l~~~p~~Rpt~~eil~ 269 (296)
T cd06654 228 IATNGTPELQ--------NPEKLSAIFRDFLNRCLDMDVEKRGSAKELLQ 269 (296)
T ss_pred HhcCCCCCCC--------CccccCHHHHHHHHHHCcCCcccCcCHHHHhh
Confidence 2211111111 11123356889999999999999999999986
No 187
>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2. Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A
Probab=100.00 E-value=2.2e-38 Score=308.94 Aligned_cols=258 Identities=24% Similarity=0.332 Sum_probs=198.3
Q ss_pred cccccccccccccceeEEEEEecCCCCc--eEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccC-CCCCcc
Q 011360 192 DCFASLEKIGSGGCGEVYKAELPGSNGK--MIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQI-RHRNIL 268 (487)
Q Consensus 192 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~--~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpnIv 268 (487)
++|.+.+.||.|+||.||+|.+. .++. .+++|.+.. .........+.+|+.++.++ +||||+
T Consensus 7 ~~~~~~~~lg~G~~g~V~~a~~~-~~~~~~~~~ik~~~~--------------~~~~~~~~~~~~Ei~~l~~l~~h~~iv 71 (303)
T cd05088 7 NDIKFQDVIGEGNFGQVLKARIK-KDGLRMDAAIKRMKE--------------YASKDDHRDFAGELEVLCKLGHHPNII 71 (303)
T ss_pred hhceeeeeecCCCCceEEEEEEc-cCCceeeEEEEEecc--------------cCCHHHHHHHHHHHHHHHHhcCCCCcc
Confidence 35889999999999999999864 3454 457776521 11223456778899999999 899999
Q ss_pred ccceEEecCCeeEEEEEecCCCCHHHHHhhhhc------------CCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeec
Q 011360 269 PLLAHMVRPDCHLLVYEFMKNGSLQDILDDVSR------------GRRELDWPSRHRIALGVASGLEYLHMYHSASIIHG 336 (487)
Q Consensus 269 ~l~~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~------------~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~ 336 (487)
++++++...+..|+||||+++++|.+++..... ....+++..++.++.|++.||+|| |++|++||
T Consensus 72 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~L---H~~gi~H~ 148 (303)
T cd05088 72 NLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYL---SQKQFIHR 148 (303)
T ss_pred eEEEEECCCCCceEEEEeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHH---HhCCcccc
Confidence 999999999999999999999999999975321 123678999999999999999999 77899999
Q ss_pred CCCCCCEEeCCCCCEEEeccCCccccCCCCceeeEeeecccccccCCcccCCCCCCchhHHHHHHHHHHHHHh-CCCCcc
Q 011360 337 DIKPRNVLLNDDMEACISDLGLAMAIPDGYTRVLISYVLGTMAYIAPEYFQQPELSEKCDIFSFGMLLISLVR-GVPSFV 415 (487)
Q Consensus 337 Dlkp~Nill~~~~~~kl~DFg~s~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DvwslG~~l~ellt-g~~pf~ 415 (487)
||||+||+++.++.+||+|||++......... ....++..|+|||.+.+..++.++||||||+++|+|+| |..||.
T Consensus 149 dlkp~Nili~~~~~~kl~dfg~~~~~~~~~~~---~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~ 225 (303)
T cd05088 149 DLAARNILVGENYVAKIADFGLSRGQEVYVKK---TMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYC 225 (303)
T ss_pred ccchheEEecCCCcEEeCccccCcccchhhhc---ccCCCcccccCHHHHhccCCcccccchhhhhHHHHHHhcCCCCcc
Confidence 99999999999999999999998643211110 11224678999999988889999999999999999998 999994
Q ss_pred ccCCCCccccHHHHHHHHhcCCCCCccCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCChHHHHHHHhhh
Q 011360 416 FHQNGEEICSPEWLRKVMNSKNPSRAIDPRLPGNGYEKKMLHVLKIAYICTLHDPEERPNSQYVRCRLSQL 486 (487)
Q Consensus 416 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~~il~~L~~l 486 (487)
.... .+..........+ ..+. ..+..+.+++.+||+.+|++|||+.+++..|..+
T Consensus 226 ~~~~------~~~~~~~~~~~~~------~~~~----~~~~~~~~li~~~l~~~p~~Rp~~~~il~~l~~~ 280 (303)
T cd05088 226 GMTC------AELYEKLPQGYRL------EKPL----NCDDEVYDLMRQCWREKPYERPSFAQILVSLNRM 280 (303)
T ss_pred cCCh------HHHHHHHhcCCcC------CCCC----CCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence 3321 1222222111111 0111 1234688999999999999999999999998765
No 188
>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase. Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down
Probab=100.00 E-value=9e-38 Score=305.37 Aligned_cols=256 Identities=24% Similarity=0.359 Sum_probs=199.2
Q ss_pred ccccccccccccceeEEEEEecCCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCCCCccccce
Q 011360 193 CFASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQIRHRNILPLLA 272 (487)
Q Consensus 193 ~~~~~~~lg~G~~g~v~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~ 272 (487)
+|.+.+.||.|+||.||++.+ ..++..+|+|.+.. ........++.+|+.++.+++||||+++++
T Consensus 2 ~~~~~~~lg~G~~g~v~~~~~-~~~~~~~a~k~~~~--------------~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~ 66 (308)
T cd06615 2 DFEKLGELGAGNGGVVTKVLH-RPSGLIMARKLIHL--------------EIKPAIRNQIIRELKVLHECNSPYIVGFYG 66 (308)
T ss_pred CceEEeeccCCCCeEEEEEEE-cCCCeEEEEEEecc--------------ccCHHHHHHHHHHHHHHHhCCCCCCCeEEE
Confidence 588999999999999999975 45788899998732 112334556888999999999999999999
Q ss_pred EEecCCeeEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCCEE
Q 011360 273 HMVRPDCHLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVLLNDDMEAC 352 (487)
Q Consensus 273 ~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nill~~~~~~k 352 (487)
++..++.+++||||+++++|.+++.. ...+++..+..++.|++.||.|||+ ..+++|+||+|+||+++.++.++
T Consensus 67 ~~~~~~~~~lv~ey~~~~~L~~~l~~----~~~~~~~~~~~~~~~i~~~l~~lH~--~~~i~H~dl~p~nil~~~~~~~~ 140 (308)
T cd06615 67 AFYSDGEISICMEHMDGGSLDQVLKK----AGRIPENILGKISIAVLRGLTYLRE--KHKIMHRDVKPSNILVNSRGEIK 140 (308)
T ss_pred EEeeCCEEEEEeeccCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHh--hCCEEECCCChHHEEEecCCcEE
Confidence 99999999999999999999999975 3568899999999999999999952 25899999999999999999999
Q ss_pred EeccCCccccCCCCceeeEeeecccccccCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCccccCCCCcc---------
Q 011360 353 ISDLGLAMAIPDGYTRVLISYVLGTMAYIAPEYFQQPELSEKCDIFSFGMLLISLVRGVPSFVFHQNGEEI--------- 423 (487)
Q Consensus 353 l~DFg~s~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DvwslG~~l~elltg~~pf~~~~~~~~~--------- 423 (487)
|+|||++........ ....+++.|+|||.+.+..++.++|+||||+++|+|++|..||.........
T Consensus 141 l~dfg~~~~~~~~~~----~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~ 216 (308)
T cd06615 141 LCDFGVSGQLIDSMA----NSFVGTRSYMSPERLQGTHYTVQSDIWSLGLSLVEMAIGRYPIPPPDAKELEAMFGRPVSE 216 (308)
T ss_pred EccCCCccccccccc----ccCCCCcCccChhHhcCCCCCccchHHHHHHHHHHHHhCCCCCCCcchhhHHHhhcCcccc
Confidence 999999876533221 3456889999999998888999999999999999999999998533210000
Q ss_pred ---------------------ccHHHHHHHHhcCCCCCccCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCChHHHHHH
Q 011360 424 ---------------------CSPEWLRKVMNSKNPSRAIDPRLPGNGYEKKMLHVLKIAYICTLHDPEERPNSQYVRCR 482 (487)
Q Consensus 424 ---------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~~il~~ 482 (487)
...+......... .+..+.. ....++.+++.+||..+|++|||+.+|+..
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~---~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~ 287 (308)
T cd06615 217 GEAKESHRPVSGHPPDSPRPMAIFELLDYIVNEP------PPKLPSG---AFSDEFQDFVDKCLKKNPKERADLKELTKH 287 (308)
T ss_pred ccccCCcccccCCCCCccchhhHHHHHHHHhcCC------CccCcCc---ccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 0000000000000 0111111 134568899999999999999999998753
No 189
>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti
Probab=100.00 E-value=2.9e-38 Score=304.43 Aligned_cols=253 Identities=26% Similarity=0.391 Sum_probs=200.5
Q ss_pred ccccccccccccccceeEEEEEecCCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCCCCcccc
Q 011360 191 EDCFASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQIRHRNILPL 270 (487)
Q Consensus 191 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l 270 (487)
.++|.+.+.||.|+||.||++... .++..+|+|.+.. ........+..|+.+++.++||||+++
T Consensus 4 ~~~~~i~~~l~~g~~~~v~~~~~~-~~~~~~~iK~~~~---------------~~~~~~~~~~~e~~~l~~l~h~~i~~~ 67 (280)
T cd06611 4 NDIWEIIGELGDGAFGKVYKAQHK-ETGLFAAAKIIQI---------------ESEEELEDFMVEIDILSECKHPNIVGL 67 (280)
T ss_pred hhHHHHHHHhcCCCCceEEEEEEc-CCCcEEEEEEEee---------------CCHHHHHHHHHHHHHHHhCCCCceeEE
Confidence 356999999999999999999764 4788999998742 122344568889999999999999999
Q ss_pred ceEEecCCeeEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCC
Q 011360 271 LAHMVRPDCHLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVLLNDDME 350 (487)
Q Consensus 271 ~~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nill~~~~~ 350 (487)
++.+..+...|+||||+++++|.+++.. .+..+++..+..++.|++.||.|| |+.||+|+||+|+||+++.++.
T Consensus 68 ~~~~~~~~~~~lv~e~~~~~~L~~~~~~---~~~~l~~~~~~~~~~ql~~~l~~l---h~~~i~h~dl~p~nili~~~~~ 141 (280)
T cd06611 68 YEAYFYENKLWILIEFCDGGALDSIMLE---LERGLTEPQIRYVCRQMLEALNFL---HSHKVIHRDLKAGNILLTLDGD 141 (280)
T ss_pred EEEEecCCeEEEEeeccCCCcHHHHHHH---hcCCCCHHHHHHHHHHHHHHHHHH---HHCCcccCCCChhhEEECCCCC
Confidence 9999999999999999999999999864 235689999999999999999999 7788999999999999999999
Q ss_pred EEEeccCCccccCCCCceeeEeeecccccccCCcccC-----CCCCCchhHHHHHHHHHHHHHhCCCCccccCCCCcccc
Q 011360 351 ACISDLGLAMAIPDGYTRVLISYVLGTMAYIAPEYFQ-----QPELSEKCDIFSFGMLLISLVRGVPSFVFHQNGEEICS 425 (487)
Q Consensus 351 ~kl~DFg~s~~~~~~~~~~~~~~~~gt~~y~aPE~l~-----~~~~~~~~DvwslG~~l~elltg~~pf~~~~~~~~~~~ 425 (487)
++|+|||++......... .....+++.|+|||.+. ...++.++|+||||+++|+|++|..||.....
T Consensus 142 ~~l~d~g~~~~~~~~~~~--~~~~~~~~~y~~PE~~~~~~~~~~~~~~~sDi~slG~il~~l~~g~~p~~~~~~------ 213 (280)
T cd06611 142 VKLADFGVSAKNKSTLQK--RDTFIGTPYWMAPEVVACETFKDNPYDYKADIWSLGITLIELAQMEPPHHELNP------ 213 (280)
T ss_pred EEEccCccchhhcccccc--cceeecchhhcCHHHHhhcccCCCCCCccccHHHHHHHHHHHHhCCCCcccCCH------
Confidence 999999988765332221 13345899999999875 34578899999999999999999999944321
Q ss_pred HHHHHHHHhcCCCCCccCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCChHHHHH
Q 011360 426 PEWLRKVMNSKNPSRAIDPRLPGNGYEKKMLHVLKIAYICTLHDPEERPNSQYVRC 481 (487)
Q Consensus 426 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~~il~ 481 (487)
............+....++ ..+..+.+++.+||+.+|++|||+.++++
T Consensus 214 ~~~~~~~~~~~~~~~~~~~--------~~~~~~~~li~~~l~~~p~~Rps~~~il~ 261 (280)
T cd06611 214 MRVLLKILKSEPPTLDQPS--------KWSSSFNDFLKSCLVKDPDDRPTAAELLK 261 (280)
T ss_pred HHHHHHHhcCCCCCcCCcc--------cCCHHHHHHHHHHhccChhhCcCHHHHhc
Confidence 1222223222221111111 12346889999999999999999999875
No 190
>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina
Probab=100.00 E-value=9.2e-38 Score=299.18 Aligned_cols=257 Identities=25% Similarity=0.333 Sum_probs=188.8
Q ss_pred ccccccceeEEEEEecC-CCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCCCCccccceEEecC
Q 011360 199 KIGSGGCGEVYKAELPG-SNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQIRHRNILPLLAHMVRP 277 (487)
Q Consensus 199 ~lg~G~~g~v~~~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~ 277 (487)
.||.|+||.||+|.... .....+++|.+.. .........+.+|+..++.++||||+++++.+...
T Consensus 2 ~lg~G~fg~v~~~~~~~~~~~~~~~~k~~~~--------------~~~~~~~~~~~~e~~~~~~l~h~nii~~~~~~~~~ 67 (269)
T cd05042 2 EIGNGWFGKVLLGEAHRGMSKARVVVKELRA--------------SATPDEQLLFLQEVQPYRELNHPNVLQCLGQCIES 67 (269)
T ss_pred cCCccCCceEEEEEEecCCCCeEEEEeecCc--------------cCChHHHHHHHHHHHHHHhCCCCCcceEEEEECCC
Confidence 68999999999997532 2445788886532 11223345678899999999999999999999999
Q ss_pred CeeEEEEEecCCCCHHHHHhhhhcC-CCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCCEEEecc
Q 011360 278 DCHLLVYEFMKNGSLQDILDDVSRG-RRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVLLNDDMEACISDL 356 (487)
Q Consensus 278 ~~~~lv~E~~~~gsL~~~l~~~~~~-~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nill~~~~~~kl~DF 356 (487)
...++||||+++|+|.+++...... ....++.....++.|++.||+|| |++||+||||||+||+++.++.+||+||
T Consensus 68 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~l---H~~~ivH~dlkp~Nill~~~~~~kl~df 144 (269)
T cd05042 68 IPYLLVLEFCPLGDLKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWL---HQADFIHSDLALRNCQLTADLSVKIGDY 144 (269)
T ss_pred CceEEEEEeCCCCcHHHHHHhccccccccccHHHHHHHHHHHHHHHHHH---HhcCEecccccHhheEecCCCcEEEecc
Confidence 9999999999999999999763221 23356778889999999999999 7788999999999999999999999999
Q ss_pred CCccccCCCCceeeEeeecccccccCCcccC-------CCCCCchhHHHHHHHHHHHHHh-CCCCccccCCCCccccHHH
Q 011360 357 GLAMAIPDGYTRVLISYVLGTMAYIAPEYFQ-------QPELSEKCDIFSFGMLLISLVR-GVPSFVFHQNGEEICSPEW 428 (487)
Q Consensus 357 g~s~~~~~~~~~~~~~~~~gt~~y~aPE~l~-------~~~~~~~~DvwslG~~l~ellt-g~~pf~~~~~~~~~~~~~~ 428 (487)
|++................+++.|+|||++. ...++.++|||||||++|||++ |..||....+ .+.
T Consensus 145 g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~------~~~ 218 (269)
T cd05042 145 GLALEQYPEDYYITKDCHAVPLRWLAPELVEIRGQDLLPKDQTKKSNIWSLGVTMWELFTAADQPYPDLSD------EQV 218 (269)
T ss_pred ccccccccchheeccCCCCCcccccCHHHHhhccccccccccchhhHHHHHHHHHHHHHhCCCCCCCcCCH------HHH
Confidence 9987543332211112334577899999864 2356889999999999999999 7888843321 122
Q ss_pred HHHHHhcCCCCCccCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCChHHHHHHHh
Q 011360 429 LRKVMNSKNPSRAIDPRLPGNGYEKKMLHVLKIAYICTLHDPEERPNSQYVRCRLS 484 (487)
Q Consensus 429 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~~il~~L~ 484 (487)
......... .....+.++. ..+..+.+++..|| .||++|||+++|++.|.
T Consensus 219 ~~~~~~~~~-~~~~~~~~~~----~~~~~~~~~~~~~~-~dp~~Rpt~~~v~~~l~ 268 (269)
T cd05042 219 LKQVVREQD-IKLPKPQLDL----KYSDRWYEVMQFCW-LDPETRPTAEEVHELLT 268 (269)
T ss_pred HHHHhhccC-ccCCCCcccc----cCCHHHHHHHHHHh-cCcccccCHHHHHHHhc
Confidence 222222221 1111121221 22345677888898 49999999999998874
No 191
>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase. Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription
Probab=100.00 E-value=1.9e-38 Score=318.46 Aligned_cols=263 Identities=23% Similarity=0.290 Sum_probs=194.5
Q ss_pred cccccccccccceeEEEEEecCCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCCCCccccceE
Q 011360 194 FASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQIRHRNILPLLAH 273 (487)
Q Consensus 194 ~~~~~~lg~G~~g~v~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~ 273 (487)
|++.+.||.|+||.||++.. ..+++.||+|++... .........+.+|+.+++.++||||++++++
T Consensus 2 ~~~~~~lg~G~~g~V~~~~~-~~~~~~vaiK~~~~~-------------~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~ 67 (372)
T cd07853 2 VEPDRPIGYGAFGVVWSVTD-PRDGKRVALKKMPNV-------------FQNLVSCKRVFRELKMLCFFKHDNVLSALDI 67 (372)
T ss_pred CcccceeeeCCCEEEEEEEE-CCCCCEEEEEecccc-------------ccchHHHHHHHHHHHHHHhCCCCCcCCHhhe
Confidence 77889999999999999974 468899999987321 1112234567889999999999999999999
Q ss_pred EecCC-----eeEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCC
Q 011360 274 MVRPD-----CHLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVLLNDD 348 (487)
Q Consensus 274 ~~~~~-----~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nill~~~ 348 (487)
+...+ ..|+||||+. ++|.+++.. ...+++..+..++.|++.||.|| |+.|++||||||+|||++.+
T Consensus 68 ~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~----~~~l~~~~~~~~~~qi~~aL~~L---H~~~ivH~dlkp~Nili~~~ 139 (372)
T cd07853 68 LQPPHIDPFEEIYVVTELMQ-SDLHKIIVS----PQPLSSDHVKVFLYQILRGLKYL---HSAGILHRDIKPGNLLVNSN 139 (372)
T ss_pred ecCCCccccceEEEEeeccc-cCHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHH---HhCCeeCCCCChHHEEECCC
Confidence 98776 7899999995 578877753 45789999999999999999999 77889999999999999999
Q ss_pred CCEEEeccCCccccCCCCceeeEeeecccccccCCcccCCC-CCCchhHHHHHHHHHHHHHhCCCCccccCCCCccc---
Q 011360 349 MEACISDLGLAMAIPDGYTRVLISYVLGTMAYIAPEYFQQP-ELSEKCDIFSFGMLLISLVRGVPSFVFHQNGEEIC--- 424 (487)
Q Consensus 349 ~~~kl~DFg~s~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~-~~~~~~DvwslG~~l~elltg~~pf~~~~~~~~~~--- 424 (487)
+.+||+|||+++......... .....+++.|+|||.+.+. .++.++|||||||++|||++|+.||..........
T Consensus 140 ~~~kL~Dfg~a~~~~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~ 218 (372)
T cd07853 140 CVLKICDFGLARVEEPDESKH-MTQEVVTQYYRAPEILMGSRHYTSAVDIWSVGCIFAELLGRRILFQAQSPIQQLDLIT 218 (372)
T ss_pred CCEEeccccceeecccCcccc-CCCCCcCCCcCCHHHHcCCCCCCcHHHHHhHHHHHHHHHcCCCCCCCCCHHHHHHHHH
Confidence 999999999997654332211 1234578999999998774 57999999999999999999999995443211000
Q ss_pred ------cHHH-------HHHHH-hcCCCCCccCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCChHHHHH
Q 011360 425 ------SPEW-------LRKVM-NSKNPSRAIDPRLPGNGYEKKMLHVLKIAYICTLHDPEERPNSQYVRC 481 (487)
Q Consensus 425 ------~~~~-------~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~~il~ 481 (487)
..+. ..... ............. ........++.+++.+||+.||++|||+.+++.
T Consensus 219 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~ 287 (372)
T cd07853 219 DLLGTPSLEAMRSACEGARAHILRGPHKPPSLPVLY--TLSSQATHEAVHLLCRMLVFDPDKRISAADALA 287 (372)
T ss_pred HHcCCCCHHHHHHhhHHHHHHHHhCCCCCCchHHhc--ccCCCCCHHHHHHHHHhCCCChhhCcCHHHHhc
Confidence 0000 00011 0000000000000 001112456889999999999999999999875
No 192
>PHA03209 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=3.8e-38 Score=314.19 Aligned_cols=193 Identities=23% Similarity=0.345 Sum_probs=162.6
Q ss_pred hccccccccccccccceeEEEEEecCCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCCCCccc
Q 011360 190 KEDCFASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQIRHRNILP 269 (487)
Q Consensus 190 ~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~ 269 (487)
....|.+.+.||.|+||.||+|... .++..||+|.... .....|+.++.+++||||++
T Consensus 64 ~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~~valK~~~~---------------------~~~~~E~~~l~~l~h~~iv~ 121 (357)
T PHA03209 64 ASLGYTVIKTLTPGSEGRVFVATKP-GQPDPVVLKIGQK---------------------GTTLIEAMLLQNVNHPSVIR 121 (357)
T ss_pred hhcCcEEEEEecCCCCeEEEEEEEC-CCCceEEEEeCCc---------------------cccHHHHHHHHhCCCCCCcC
Confidence 3456999999999999999999754 5678899996421 12245888999999999999
Q ss_pred cceEEecCCeeEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCC
Q 011360 270 LLAHMVRPDCHLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVLLNDDM 349 (487)
Q Consensus 270 l~~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nill~~~~ 349 (487)
+++++......++|||++ .++|.+++.. ....+++..+..++.|++.||.|| |++||+||||||+|||++.++
T Consensus 122 ~~~~~~~~~~~~lv~e~~-~~~l~~~l~~---~~~~~~~~~~~~i~~qi~~aL~~L---H~~~ivHrDlkp~Nill~~~~ 194 (357)
T PHA03209 122 MKDTLVSGAITCMVLPHY-SSDLYTYLTK---RSRPLPIDQALIIEKQILEGLRYL---HAQRIIHRDVKTENIFINDVD 194 (357)
T ss_pred hhheEEeCCeeEEEEEcc-CCcHHHHHHh---ccCCCCHHHHHHHHHHHHHHHHHH---HHCCeecCCCCHHHEEECCCC
Confidence 999999999999999999 5688888753 346789999999999999999999 777899999999999999999
Q ss_pred CEEEeccCCccccCCCCceeeEeeecccccccCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCc
Q 011360 350 EACISDLGLAMAIPDGYTRVLISYVLGTMAYIAPEYFQQPELSEKCDIFSFGMLLISLVRGVPSF 414 (487)
Q Consensus 350 ~~kl~DFg~s~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DvwslG~~l~elltg~~pf 414 (487)
.+||+|||++........ .....||+.|+|||++.+..++.++|||||||++|||+++..|+
T Consensus 195 ~~kl~DfG~a~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvvl~ell~~~~~~ 256 (357)
T PHA03209 195 QVCIGDLGAAQFPVVAPA---FLGLAGTVETNAPEVLARDKYNSKADIWSAGIVLFEMLAYPSTI 256 (357)
T ss_pred CEEEecCccccccccCcc---cccccccccccCCeecCCCCCCchhhHHHHHHHHHHHHHcCCcc
Confidence 999999999875332211 12356899999999999999999999999999999999964443
No 193
>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase. Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and
Probab=100.00 E-value=9.2e-38 Score=296.96 Aligned_cols=252 Identities=26% Similarity=0.388 Sum_probs=197.6
Q ss_pred cccccccceeEEEEEecCCCCc--eEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCCCCccccceEEe
Q 011360 198 EKIGSGGCGEVYKAELPGSNGK--MIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQIRHRNILPLLAHMV 275 (487)
Q Consensus 198 ~~lg~G~~g~v~~~~~~~~~~~--~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~ 275 (487)
+.||.|++|.||+|.+...++. .||+|.+... .. ....+.+.+|+.++++++||||+++++.+.
T Consensus 1 ~~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~-------------~~-~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~ 66 (257)
T cd05040 1 KKLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSD-------------KL-SDIMDDFLKEAAIMHSLDHENLIRLYGVVL 66 (257)
T ss_pred CcCCccCcccEEeeeEecCCCCceEEEEeecCCc-------------cc-HHHHHHHHHHHHHHhhcCCCCccceeEEEc
Confidence 3689999999999987543343 6899987321 11 145677889999999999999999999988
Q ss_pred cCCeeEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCCEEEec
Q 011360 276 RPDCHLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVLLNDDMEACISD 355 (487)
Q Consensus 276 ~~~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nill~~~~~~kl~D 355 (487)
. ...+++|||+++++|.+++... ....+++..+..++.|++.||.|| |++|++|+||+|+||+++.++.+||+|
T Consensus 67 ~-~~~~~v~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~~qi~~~L~~l---H~~~i~H~di~p~nil~~~~~~~kl~d 140 (257)
T cd05040 67 T-HPLMMVTELAPLGSLLDRLRKD--ALGHFLISTLCDYAVQIANGMRYL---ESKRFIHRDLAARNILLASDDKVKIGD 140 (257)
T ss_pred C-CeEEEEEEecCCCcHHHHHHhc--ccccCcHHHHHHHHHHHHHHHHHH---HhCCccccccCcccEEEecCCEEEecc
Confidence 8 8899999999999999998752 115689999999999999999999 778999999999999999999999999
Q ss_pred cCCccccCCCCcee-eEeeecccccccCCcccCCCCCCchhHHHHHHHHHHHHHh-CCCCccccCCCCccccHHHHHHHH
Q 011360 356 LGLAMAIPDGYTRV-LISYVLGTMAYIAPEYFQQPELSEKCDIFSFGMLLISLVR-GVPSFVFHQNGEEICSPEWLRKVM 433 (487)
Q Consensus 356 Fg~s~~~~~~~~~~-~~~~~~gt~~y~aPE~l~~~~~~~~~DvwslG~~l~ellt-g~~pf~~~~~~~~~~~~~~~~~~~ 433 (487)
||++.......... ......++..|+|||.+.+..++.++||||||+++|+|++ |..||.... ..+......
T Consensus 141 fg~~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~------~~~~~~~~~ 214 (257)
T cd05040 141 FGLMRALPQNEDHYVMEEHLKVPFAWCAPESLRTRTFSHASDVWMFGVTLWEMFTYGEEPWAGLS------GSQILKKID 214 (257)
T ss_pred ccccccccccccceecccCCCCCceecCHHHhcccCcCchhhhHHHHHHHHHHHhCCCCCCCCCC------HHHHHHHHH
Confidence 99998765432211 1123456789999999998899999999999999999998 999994321 122222222
Q ss_pred hcCCCCCccCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCChHHHHHHHh
Q 011360 434 NSKNPSRAIDPRLPGNGYEKKMLHVLKIAYICTLHDPEERPNSQYVRCRLS 484 (487)
Q Consensus 434 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~~il~~L~ 484 (487)
... .... .+ ...+..+.+++.+||+.+|++|||+.++++.|.
T Consensus 215 ~~~-~~~~----~~----~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~ 256 (257)
T cd05040 215 KEG-ERLE----RP----EACPQDIYNVMLQCWAHNPADRPTFAALREFLP 256 (257)
T ss_pred hcC-CcCC----CC----ccCCHHHHHHHHHHCCCCcccCCCHHHHHHHhc
Confidence 111 1111 11 112356889999999999999999999999885
No 194
>PHA03207 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=5.4e-38 Score=316.99 Aligned_cols=259 Identities=22% Similarity=0.237 Sum_probs=197.6
Q ss_pred cccccccccccccceeEEEEEec-CCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCCCCcccc
Q 011360 192 DCFASLEKIGSGGCGEVYKAELP-GSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQIRHRNILPL 270 (487)
Q Consensus 192 ~~~~~~~~lg~G~~g~v~~~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l 270 (487)
.+|.+.+.||.|+||.||++... ..++..||+|.+.. .....+|+.+++.++||||+++
T Consensus 92 ~~y~i~~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~--------------------~~~~~~E~~il~~l~h~~iv~~ 151 (392)
T PHA03207 92 MQYNILSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTG--------------------GKTPGREIDILKTISHRAIINL 151 (392)
T ss_pred CceEEEEeecCCCCeEEEEEEEcCCccceeEEEEeccc--------------------cccHHHHHHHHHhcCCCCccce
Confidence 46999999999999999999753 23567899997621 0123579999999999999999
Q ss_pred ceEEecCCeeEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCC
Q 011360 271 LAHMVRPDCHLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVLLNDDME 350 (487)
Q Consensus 271 ~~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nill~~~~~ 350 (487)
++++......|++||++ +++|.+++.. ...+++..+..++.|++.||.|| |++||+||||||+|||++.++.
T Consensus 152 ~~~~~~~~~~~lv~e~~-~~~l~~~l~~----~~~l~~~~~~~i~~ql~~aL~~L---H~~givHrDlkp~Nill~~~~~ 223 (392)
T PHA03207 152 IHAYRWKSTVCMVMPKY-KCDLFTYVDR----SGPLPLEQAITIQRRLLEALAYL---HGRGIIHRDVKTENIFLDEPEN 223 (392)
T ss_pred eeeEeeCCEEEEEehhc-CCCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHH---HHCCccccCCCHHHEEEcCCCC
Confidence 99999999999999999 4688888843 46789999999999999999999 7788999999999999999999
Q ss_pred EEEeccCCccccCCCCceeeEeeecccccccCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCccccCCCCccccHHHHH
Q 011360 351 ACISDLGLAMAIPDGYTRVLISYVLGTMAYIAPEYFQQPELSEKCDIFSFGMLLISLVRGVPSFVFHQNGEEICSPEWLR 430 (487)
Q Consensus 351 ~kl~DFg~s~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DvwslG~~l~elltg~~pf~~~~~~~~~~~~~~~~ 430 (487)
++|+|||+++...............||+.|+|||++.+..++.++|||||||++|||++|..||.+............+.
T Consensus 224 ~~l~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~l~~i~ 303 (392)
T PHA03207 224 AVLGDFGAACKLDAHPDTPQCYGWSGTLETNSPELLALDPYCAKTDIWSAGLVLFEMSVKNVTLFGKQVKSSSSQLRSII 303 (392)
T ss_pred EEEccCccccccCcccccccccccccccCccCHhHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCCCCcHHHHHHHH
Confidence 99999999987655433333345679999999999999999999999999999999999999996554322110000010
Q ss_pred HHHh-----------------------cCCCCCccCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCChHHHHH
Q 011360 431 KVMN-----------------------SKNPSRAIDPRLPGNGYEKKMLHVLKIAYICTLHDPEERPNSQYVRC 481 (487)
Q Consensus 431 ~~~~-----------------------~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~~il~ 481 (487)
.... ...+...+++.+. ......++.+++.+||..||++|||+.+++.
T Consensus 304 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~li~~ml~~dp~~Rpsa~e~l~ 374 (392)
T PHA03207 304 RCMQVHPLEFPQNGSTNLCKHFKQYAIVLRPPYTIPPVIR---KYGMHMDVEYLIAKMLTFDQEFRPSAQDILS 374 (392)
T ss_pred HHhccCccccCCccchhHHHHHHhhcccccCCccccchhh---ccCcchhHHHHHHHHhccChhhCCCHHHHhh
Confidence 0000 0000000000000 0112346788999999999999999999875
No 195
>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a
Probab=100.00 E-value=9.3e-38 Score=301.67 Aligned_cols=266 Identities=21% Similarity=0.330 Sum_probs=202.6
Q ss_pred ccccccccccccceeEEEEEec---CCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCCCCccc
Q 011360 193 CFASLEKIGSGGCGEVYKAELP---GSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQIRHRNILP 269 (487)
Q Consensus 193 ~~~~~~~lg~G~~g~v~~~~~~---~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~ 269 (487)
.|.+++.||+|+||.||+++++ ..++..||+|.+.. .........+.+|+.+++.+.||||++
T Consensus 5 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~--------------~~~~~~~~~~~~e~~~l~~l~h~~i~~ 70 (284)
T cd05079 5 FLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKP--------------ESGGNHIADLKKEIEILRNLYHENIVK 70 (284)
T ss_pred hhhhceecCCCCceeEEEEEEccCCCCccceEEEEEcCc--------------cccHHHHHHHHHHHHHHHhCCCCCeee
Confidence 4788999999999999999753 34678999998732 111233456889999999999999999
Q ss_pred cceEEecC--CeeEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCC
Q 011360 270 LLAHMVRP--DCHLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVLLND 347 (487)
Q Consensus 270 l~~~~~~~--~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nill~~ 347 (487)
+++++... ...++||||++|++|.+++.. ....+++..+..++.|++.||+|| |++|++||||||+||+++.
T Consensus 71 ~~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~---~~~~~~~~~~~~i~~~i~~aL~~l---H~~gi~H~dlkp~Nil~~~ 144 (284)
T cd05079 71 YKGICTEDGGNGIKLIMEFLPSGSLKEYLPR---NKNKINLKQQLKYAVQICKGMDYL---GSRQYVHRDLAARNVLVES 144 (284)
T ss_pred eeeEEecCCCCceEEEEEccCCCCHHHHHHh---ccCCCCHHHHHHHHHHHHHHHHHH---HHCCeeecccchheEEEcC
Confidence 99988775 568999999999999999864 234689999999999999999999 7788999999999999999
Q ss_pred CCCEEEeccCCccccCCCCcee-eEeeecccccccCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCccccCC-------
Q 011360 348 DMEACISDLGLAMAIPDGYTRV-LISYVLGTMAYIAPEYFQQPELSEKCDIFSFGMLLISLVRGVPSFVFHQN------- 419 (487)
Q Consensus 348 ~~~~kl~DFg~s~~~~~~~~~~-~~~~~~gt~~y~aPE~l~~~~~~~~~DvwslG~~l~elltg~~pf~~~~~------- 419 (487)
++.++|+|||++.......... ......++..|+|||.+.+..++.++||||||+++|+|+|+..|+.....
T Consensus 145 ~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~ellt~~~~~~~~~~~~~~~~~ 224 (284)
T cd05079 145 EHQVKIGDFGLTKAIETDKEYYTVKDDLDSPVFWYAPECLIQSKFYIASDVWSFGVTLYELLTYCDSESSPMTLFLKMIG 224 (284)
T ss_pred CCCEEECCCccccccccCccceeecCCCCCCccccCHHHhccCCCCccccchhhhhhhhhhhcCCCCCccccchhhhhcc
Confidence 9999999999998765432211 11234567789999999888899999999999999999998766522110
Q ss_pred -CCccccHHHHHHHHhcCCCCCccCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCChHHHHHHHhhhC
Q 011360 420 -GEEICSPEWLRKVMNSKNPSRAIDPRLPGNGYEKKMLHVLKIAYICTLHDPEERPNSQYVRCRLSQLL 487 (487)
Q Consensus 420 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~~il~~L~~ll 487 (487)
..................... .+. ..+..+.+++.+||+.+|++|||++++++.|+.++
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~-----~~~----~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~~~~ 284 (284)
T cd05079 225 PTHGQMTVTRLVRVLEEGKRLP-----RPP----NCPEEVYQLMRKCWEFQPSKRTTFQNLIEGFEAIL 284 (284)
T ss_pred cccccccHHHHHHHHHcCccCC-----CCC----CCCHHHHHHHHHHccCCcccCcCHHHHHHHHHhhC
Confidence 000001111111121111110 111 13356999999999999999999999999999874
No 196
>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t
Probab=100.00 E-value=4.2e-38 Score=300.01 Aligned_cols=256 Identities=27% Similarity=0.395 Sum_probs=202.7
Q ss_pred ccccccccccccccceeEEEEEecCCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCCCCcccc
Q 011360 191 EDCFASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQIRHRNILPL 270 (487)
Q Consensus 191 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l 270 (487)
.++|.+.+.||.|+||.||+|..+ ++..+|+|.+.. .......+.+|+.+++.++||||+++
T Consensus 5 ~~~~~i~~~ig~g~~~~v~~~~~~--~~~~~~vK~~~~----------------~~~~~~~~~~e~~~l~~l~h~~i~~~ 66 (261)
T cd05034 5 RESLKLERKLGAGQFGEVWMGTWN--GTTKVAVKTLKP----------------GTMSPEAFLQEAQIMKKLRHDKLVQL 66 (261)
T ss_pred hhheeeeeeeccCcceEEEEEEEc--CCceEEEEEecC----------------CccCHHHHHHHHHHHhhCCCCCEeee
Confidence 457999999999999999999754 557799998732 11123457889999999999999999
Q ss_pred ceEEecCCeeEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCC
Q 011360 271 LAHMVRPDCHLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVLLNDDME 350 (487)
Q Consensus 271 ~~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nill~~~~~ 350 (487)
++++......+++|||+++++|.+++.. ..+..+++..+..++.|++.|+.|| |++|++|+||+|+||+++.++.
T Consensus 67 ~~~~~~~~~~~~v~e~~~~~~L~~~i~~--~~~~~~~~~~~~~~~~~i~~al~~l---h~~~i~h~di~p~nili~~~~~ 141 (261)
T cd05034 67 YAVCSEEEPIYIVTEYMSKGSLLDFLKS--GEGKKLRLPQLVDMAAQIAEGMAYL---ESRNYIHRDLAARNILVGENLV 141 (261)
T ss_pred eeeeecCCceEEEEeccCCCCHHHHHhc--cccCCCCHHHHHHHHHHHHHHHHHH---HhCCcccCCcchheEEEcCCCC
Confidence 9999988999999999999999999975 2345689999999999999999999 7778999999999999999999
Q ss_pred EEEeccCCccccCCCCceeeEeeecccccccCCcccCCCCCCchhHHHHHHHHHHHHHh-CCCCccccCCCCccccHHHH
Q 011360 351 ACISDLGLAMAIPDGYTRVLISYVLGTMAYIAPEYFQQPELSEKCDIFSFGMLLISLVR-GVPSFVFHQNGEEICSPEWL 429 (487)
Q Consensus 351 ~kl~DFg~s~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DvwslG~~l~ellt-g~~pf~~~~~~~~~~~~~~~ 429 (487)
++|+|||++.......... .....++..|+|||.+.+..++.++|+||||+++|++++ |+.||..... ....
T Consensus 142 ~~l~d~g~~~~~~~~~~~~-~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~------~~~~ 214 (261)
T cd05034 142 CKIADFGLARLIEDDEYTA-REGAKFPIKWTAPEAANYGRFTIKSDVWSFGILLTEIVTYGRVPYPGMTN------REVL 214 (261)
T ss_pred EEECccccceeccchhhhh-hhccCCCccccCHHHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCH------HHHH
Confidence 9999999987664321111 112234678999999998889999999999999999999 8999943321 1222
Q ss_pred HHHHhcCCCCCccCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCChHHHHHHHhhh
Q 011360 430 RKVMNSKNPSRAIDPRLPGNGYEKKMLHVLKIAYICTLHDPEERPNSQYVRCRLSQL 486 (487)
Q Consensus 430 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~~il~~L~~l 486 (487)
......... ..+... +..+.+++.+||..+|++|||+.++.+.|+.+
T Consensus 215 ~~~~~~~~~--~~~~~~--------~~~~~~~i~~~l~~~p~~Rp~~~~l~~~l~~~ 261 (261)
T cd05034 215 EQVERGYRM--PRPPNC--------PEELYDLMLQCWDKDPEERPTFEYLQSFLEDY 261 (261)
T ss_pred HHHHcCCCC--CCCCCC--------CHHHHHHHHHHcccCcccCCCHHHHHHHHhcC
Confidence 222221111 111111 34688999999999999999999999999864
No 197
>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,
Probab=100.00 E-value=6.1e-38 Score=309.59 Aligned_cols=257 Identities=22% Similarity=0.267 Sum_probs=195.4
Q ss_pred ccccccccccccceeEEEEEecCCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCCCCccccce
Q 011360 193 CFASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQIRHRNILPLLA 272 (487)
Q Consensus 193 ~~~~~~~lg~G~~g~v~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~ 272 (487)
+|.+.+.||+|+||.||+++. ..+++.||+|++.. ...........+.+|..++..++||||+++++
T Consensus 2 ~y~~~~~lG~G~~g~V~~~~~-~~~~~~~aiK~~~~------------~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~ 68 (331)
T cd05597 2 DFEILKVIGRGAFGEVAVVKM-KNTGQVYAMKILNK------------WEMLKRAETACFREERDVLVNGDRRWITNLHY 68 (331)
T ss_pred CceEEEEEEecCCeEEEEEEE-CCCCCEEEEEEEEH------------HHHhhhhhHHHHHHHHHHHHhCCCCCCCceEE
Confidence 589999999999999999975 45788999998732 11222334566788999999999999999999
Q ss_pred EEecCCeeEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCCEE
Q 011360 273 HMVRPDCHLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVLLNDDMEAC 352 (487)
Q Consensus 273 ~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nill~~~~~~k 352 (487)
++.+++.+|+||||+++|+|.+++.. ....+++..+..++.|++.||+|| |++||+||||||+|||++.++.+|
T Consensus 69 ~~~~~~~~~lv~e~~~g~~L~~~l~~---~~~~~~~~~~~~~~~qi~~~l~~l---H~~~ivH~dlkp~Nill~~~~~~k 142 (331)
T cd05597 69 AFQDENNLYLVMDYYVGGDLLTLLSK---FEDRLPEDMARFYLAEMVLAIDSV---HQLGYVHRDIKPDNVLLDKNGHIR 142 (331)
T ss_pred EEecCCeEEEEEecCCCCcHHHHHHH---hcCCCCHHHHHHHHHHHHHHHHHH---HhCCeEECCCCHHHEEECCCCCEE
Confidence 99999999999999999999999864 245688999999999999999999 778899999999999999999999
Q ss_pred EeccCCccccCCCCceeeEeeecccccccCCcccCC-----CCCCchhHHHHHHHHHHHHHhCCCCccccCCCCccccHH
Q 011360 353 ISDLGLAMAIPDGYTRVLISYVLGTMAYIAPEYFQQ-----PELSEKCDIFSFGMLLISLVRGVPSFVFHQNGEEICSPE 427 (487)
Q Consensus 353 l~DFg~s~~~~~~~~~~~~~~~~gt~~y~aPE~l~~-----~~~~~~~DvwslG~~l~elltg~~pf~~~~~~~~~~~~~ 427 (487)
|+|||++.......... .....||+.|+|||++.. ..++.++|||||||++|+|++|..||.... ..+
T Consensus 143 l~Dfg~~~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~------~~~ 215 (331)
T cd05597 143 LADFGSCLRLLADGTVQ-SNVAVGTPDYISPEILQAMEDGKGRYGPECDWWSLGVCMYEMLYGETPFYAES------LVE 215 (331)
T ss_pred EEECCceeecCCCCCcc-ccceeccccccCHHHHhhccccccCCCCcceeehhhhHHHHHhhCCCCCCCCC------HHH
Confidence 99999987654332211 123458999999999863 457889999999999999999999994321 122
Q ss_pred HHHHHHhcCCCCCccCCCCCCCCcHHHHHHHHHHHhhccCCCC--CCCCChHHHHH
Q 011360 428 WLRKVMNSKNPSRAIDPRLPGNGYEKKMLHVLKIAYICTLHDP--EERPNSQYVRC 481 (487)
Q Consensus 428 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P--~~RPs~~~il~ 481 (487)
........... ..+++.. ...+..+.+++.+|+..++ ..||++++++.
T Consensus 216 ~~~~i~~~~~~-~~~~~~~-----~~~~~~~~~li~~ll~~~~~r~~r~~~~~~l~ 265 (331)
T cd05597 216 TYGKIMNHKEH-FQFPPDV-----TDVSEEAKDLIRRLICSPETRLGRNGLQDFKD 265 (331)
T ss_pred HHHHHHcCCCc-ccCCCcc-----CCCCHHHHHHHHHHccCcccccCCCCHHHHhc
Confidence 22333221111 1111111 1133557788888775533 34789988875
No 198
>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage
Probab=100.00 E-value=1.2e-37 Score=298.33 Aligned_cols=258 Identities=21% Similarity=0.312 Sum_probs=189.9
Q ss_pred cccccccceeEEEEEecC-CCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCCCCccccceEEec
Q 011360 198 EKIGSGGCGEVYKAELPG-SNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQIRHRNILPLLAHMVR 276 (487)
Q Consensus 198 ~~lg~G~~g~v~~~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~ 276 (487)
+.||.|+||.||+|.... .....+++|.+.. .........+.+|+.+++.++||||+++++.+..
T Consensus 1 ~~lg~G~~g~v~~~~~~~~~~~~~~~~k~~~~--------------~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~ 66 (268)
T cd05086 1 QEIGNGWFGKVLLSEIYTDTGVARVVVKELKA--------------NASSKEQNEFLQQGDPYRILQHPNILQCLGQCVE 66 (268)
T ss_pred CcCCCCcCceEEEEEEEcCCCcceEEEEEecC--------------CCChHHHHHHHHHHHHHhccCCcchhheEEEecC
Confidence 369999999999997532 2334566776532 1112235678889999999999999999999999
Q ss_pred CCeeEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCCEEEecc
Q 011360 277 PDCHLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVLLNDDMEACISDL 356 (487)
Q Consensus 277 ~~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nill~~~~~~kl~DF 356 (487)
....|+||||+++|+|.+++..........++..+..++.|++.||.|| |+.+++||||||+|||++.++.++|+||
T Consensus 67 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~al~~l---H~~~i~H~dikp~nil~~~~~~~~l~Df 143 (268)
T cd05086 67 AIPYLLVFEYCELGDLKSYLSQEQWHRRNSQLLLLQRMACEIAAGVTHM---HKHNFLHSDLALRNCFLTSDLTVKVGDY 143 (268)
T ss_pred CCccEEEEecCCCCcHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHH---HHCCeeccCCccceEEEcCCccEEeccc
Confidence 9999999999999999999975333344567778889999999999999 6778999999999999999999999999
Q ss_pred CCccccCCCCceeeEeeecccccccCCcccCC-------CCCCchhHHHHHHHHHHHHHhC-CCCccccCCCCccccHHH
Q 011360 357 GLAMAIPDGYTRVLISYVLGTMAYIAPEYFQQ-------PELSEKCDIFSFGMLLISLVRG-VPSFVFHQNGEEICSPEW 428 (487)
Q Consensus 357 g~s~~~~~~~~~~~~~~~~gt~~y~aPE~l~~-------~~~~~~~DvwslG~~l~elltg-~~pf~~~~~~~~~~~~~~ 428 (487)
|++................++..|+|||++.. ..++.++||||||+++|||+++ ..||.... ..+.
T Consensus 144 g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~------~~~~ 217 (268)
T cd05086 144 GIGPSRYKEDYIETEDDKCVPLRWLAPELVGEFHGGLITAEQTKPSNVWALGVTLWELFENAAQPYSHLS------DREV 217 (268)
T ss_pred ccccccCcchhhhcccCCcCcccccCchhcccccCccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCC------HHHH
Confidence 99864322211111123457889999998753 2457899999999999999974 77873322 2233
Q ss_pred HHHHHhcCCCCCccCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCChHHHHHHHh
Q 011360 429 LRKVMNSKNPSRAIDPRLPGNGYEKKMLHVLKIAYICTLHDPEERPNSQYVRCRLS 484 (487)
Q Consensus 429 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~~il~~L~ 484 (487)
........ .....++.++.. ....+.+++..|| .+|++|||+++|++.|.
T Consensus 218 ~~~~~~~~-~~~~~~~~~~~~----~~~~~~~l~~~c~-~~P~~Rp~~~~i~~~l~ 267 (268)
T cd05086 218 LNHVIKDQ-QVKLFKPQLELP----YSERWYEVLQFCW-LSPEKRATAEEVHRLLT 267 (268)
T ss_pred HHHHHhhc-ccccCCCccCCC----CcHHHHHHHHHHh-hCcccCCCHHHHHHHhc
Confidence 33333322 222223333222 2345778888999 57999999999998874
No 199
>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron. Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca
Probab=100.00 E-value=8.5e-38 Score=298.08 Aligned_cols=254 Identities=24% Similarity=0.331 Sum_probs=192.2
Q ss_pred cccccccceeEEEEEecC--CCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCCCCccccceEEe
Q 011360 198 EKIGSGGCGEVYKAELPG--SNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQIRHRNILPLLAHMV 275 (487)
Q Consensus 198 ~~lg~G~~g~v~~~~~~~--~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~ 275 (487)
+.||.|+||.||+|.+.. ..+..+|+|.+.. .........+.+|+.+++.++||||+++++++.
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~aiK~~~~--------------~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~ 66 (262)
T cd05058 1 RVIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNR--------------ITDLEEVEQFLKEGIIMKDFSHPNVLSLLGICL 66 (262)
T ss_pred CcccccCCceEEEEEEecCCCceEEEEEEecCc--------------cCCHHHHHHHHHHHHHHccCCCCCcceEEEEee
Confidence 468999999999997632 2446799997622 112234567788999999999999999999765
Q ss_pred -cCCeeEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCCEEEe
Q 011360 276 -RPDCHLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVLLNDDMEACIS 354 (487)
Q Consensus 276 -~~~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nill~~~~~~kl~ 354 (487)
.++..+++|||+.+|+|.+++.. .....++..+..++.|++.||.|| |+.|++||||||+||+++.++.+||+
T Consensus 67 ~~~~~~~lv~e~~~~~~L~~~~~~---~~~~~~~~~~~~~~~~i~~~l~~l---H~~~i~H~dlk~~nili~~~~~~kl~ 140 (262)
T cd05058 67 PSEGSPLVVLPYMKHGDLRNFIRS---ETHNPTVKDLIGFGLQVAKGMEYL---ASKKFVHRDLAARNCMLDESFTVKVA 140 (262)
T ss_pred cCCCCcEEEEecCCCCCHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHH---HhCCccccccCcceEEEcCCCcEEEC
Confidence 45567899999999999999864 233467778889999999999999 67789999999999999999999999
Q ss_pred ccCCccccCCCCcee--eEeeecccccccCCcccCCCCCCchhHHHHHHHHHHHHHhC-CCCccccCCCCccccHHHHHH
Q 011360 355 DLGLAMAIPDGYTRV--LISYVLGTMAYIAPEYFQQPELSEKCDIFSFGMLLISLVRG-VPSFVFHQNGEEICSPEWLRK 431 (487)
Q Consensus 355 DFg~s~~~~~~~~~~--~~~~~~gt~~y~aPE~l~~~~~~~~~DvwslG~~l~elltg-~~pf~~~~~~~~~~~~~~~~~ 431 (487)
|||+++......... ......+++.|+|||.+.+..++.++||||||+++|||++| .+||... ...+....
T Consensus 141 dfg~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~------~~~~~~~~ 214 (262)
T cd05058 141 DFGLARDIYDKEYYSVHNHTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDV------DSFDITVY 214 (262)
T ss_pred CccccccccCCcceeecccccCcCCccccChhHhccCccchHHHHHHHHHHHHHHHcCCCCCCCCC------CHHHHHHH
Confidence 999987654322111 11123457789999999888899999999999999999995 6666322 12222332
Q ss_pred HHhcCCCCCccCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCChHHHHHHHhhhC
Q 011360 432 VMNSKNPSRAIDPRLPGNGYEKKMLHVLKIAYICTLHDPEERPNSQYVRCRLSQLL 487 (487)
Q Consensus 432 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~~il~~L~~ll 487 (487)
......+. .+. ..+..+.+++.+||+.+|++||++.+|+..|++++
T Consensus 215 ~~~~~~~~--~~~--------~~~~~~~~li~~cl~~~p~~Rp~~~~il~~l~~~~ 260 (262)
T cd05058 215 LLQGRRLL--QPE--------YCPDPLYEVMLSCWHPKPEMRPTFSELVSRIEQIF 260 (262)
T ss_pred HhcCCCCC--CCC--------cCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHh
Confidence 32221111 111 11246889999999999999999999999998763
No 200
>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase. Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa
Probab=100.00 E-value=1.1e-37 Score=297.20 Aligned_cols=256 Identities=24% Similarity=0.401 Sum_probs=201.1
Q ss_pred hccccccccccccccceeEEEEEecCCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCCCCccc
Q 011360 190 KEDCFASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQIRHRNILP 269 (487)
Q Consensus 190 ~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~ 269 (487)
..+.|.+.+.||.|+||.||++... .+..+|+|.+.. .......+.+|+.+++.++|+||++
T Consensus 4 ~~~~~~~~~~lg~g~~~~vy~~~~~--~~~~~~iK~~~~----------------~~~~~~~~~~e~~~l~~l~~~~i~~ 65 (260)
T cd05073 4 PRESLKLEKKLGAGQFGEVWMATYN--KHTKVAVKTMKP----------------GSMSVEAFLAEANVMKTLQHDKLVK 65 (260)
T ss_pred cccceeEEeEecCccceEEEEEEec--CCccEEEEecCC----------------ChhHHHHHHHHHHHHHhcCCCCcce
Confidence 3457999999999999999999754 556799997631 1223456788999999999999999
Q ss_pred cceEEecCCeeEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCC
Q 011360 270 LLAHMVRPDCHLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVLLNDDM 349 (487)
Q Consensus 270 l~~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nill~~~~ 349 (487)
+++.+.. ...+++|||+++++|.+++.. ..+..+++..+..++.|++.||.|| |+.|++|+||+|+||+++.++
T Consensus 66 ~~~~~~~-~~~~~v~e~~~~~~L~~~~~~--~~~~~~~~~~~~~~~~~l~~aL~~l---H~~~i~H~dl~p~ni~i~~~~ 139 (260)
T cd05073 66 LHAVVTK-EPIYIITEFMAKGSLLDFLKS--DEGSKQPLPKLIDFSAQIAEGMAFI---EQRNYIHRDLRAANILVSASL 139 (260)
T ss_pred EEEEEcC-CCeEEEEEeCCCCcHHHHHHh--CCccccCHHHHHHHHHHHHHHHHHH---HhCCccccccCcceEEEcCCC
Confidence 9998887 778999999999999999975 2345678889999999999999999 677899999999999999999
Q ss_pred CEEEeccCCccccCCCCceeeEeeecccccccCCcccCCCCCCchhHHHHHHHHHHHHHh-CCCCccccCCCCccccHHH
Q 011360 350 EACISDLGLAMAIPDGYTRVLISYVLGTMAYIAPEYFQQPELSEKCDIFSFGMLLISLVR-GVPSFVFHQNGEEICSPEW 428 (487)
Q Consensus 350 ~~kl~DFg~s~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DvwslG~~l~ellt-g~~pf~~~~~~~~~~~~~~ 428 (487)
.+||+|||.+.......... .....++..|+|||.+....++.++|+||||+++|+++| |..||.... ....
T Consensus 140 ~~~l~d~~~~~~~~~~~~~~-~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~------~~~~ 212 (260)
T cd05073 140 VCKIADFGLARVIEDNEYTA-REGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMS------NPEV 212 (260)
T ss_pred cEEECCCcceeeccCCCccc-ccCCcccccccCHhHhccCCcCccccchHHHHHHHHHHhcCCCCCCCCC------HHHH
Confidence 99999999987654332211 122345678999999998889999999999999999999 899994322 1112
Q ss_pred HHHHHhcCCCCCccCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCChHHHHHHHhhh
Q 011360 429 LRKVMNSKNPSRAIDPRLPGNGYEKKMLHVLKIAYICTLHDPEERPNSQYVRCRLSQL 486 (487)
Q Consensus 429 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~~il~~L~~l 486 (487)
.. ......... .+ ...+.++.+++.+||+.+|++||++.++.+.|+.+
T Consensus 213 ~~-~~~~~~~~~-----~~----~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~~L~~~ 260 (260)
T cd05073 213 IR-ALERGYRMP-----RP----ENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDDF 260 (260)
T ss_pred HH-HHhCCCCCC-----Cc----ccCCHHHHHHHHHHcccCcccCcCHHHHHHHHhcC
Confidence 22 222221111 11 12235688999999999999999999999999864
No 201
>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=9.7e-39 Score=315.04 Aligned_cols=250 Identities=25% Similarity=0.376 Sum_probs=202.1
Q ss_pred ccccccccccceeEEEEEecCCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCCCCccccceEE
Q 011360 195 ASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQIRHRNILPLLAHM 274 (487)
Q Consensus 195 ~~~~~lg~G~~g~v~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~ 274 (487)
....+||+|+|-+||+| .+..+|..||--.+ --.+....+....++..|+.+|+.|+||||+++|.+|
T Consensus 43 k~~evLGrGafKtVYka-~De~~giEVAWnqv-----------k~~d~~q~~~~leR~~~Ev~lLKsL~H~NIirfy~SW 110 (632)
T KOG0584|consen 43 KFDEVLGRGAFKTVYKA-FDEEEGIEVAWNQV-----------KIRDVTQSPEELERLYSEVHLLKSLKHPNIIRFYDSW 110 (632)
T ss_pred ehhhhcccccceeeeec-cccccchhhHHHHH-----------hHHHhhcChHHHHHHHHHHHHHccCCCCceeeeeehe
Confidence 45578999999999999 46677877763322 1123344556778999999999999999999999999
Q ss_pred ecCCe--eEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCC-CCCE
Q 011360 275 VRPDC--HLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVLLND-DMEA 351 (487)
Q Consensus 275 ~~~~~--~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nill~~-~~~~ 351 (487)
.+... +.+|+|.+..|+|..|+.++ +......+..|++||+.||.|||+ |..-|+|||||.+||+|+. .|.|
T Consensus 111 ~d~~n~~in~iTEL~TSGtLr~Y~kk~----~~vn~kaik~W~RQILkGL~yLHs-~~PPIIHRDLKCDNIFinG~~G~V 185 (632)
T KOG0584|consen 111 VDTDNKTINFITELFTSGTLREYRKKH----RRVNIKAIKSWCRQILKGLVYLHS-QDPPIIHRDLKCDNIFVNGNLGEV 185 (632)
T ss_pred ecCCCceeeeeeecccCCcHHHHHHHh----ccCCHHHHHHHHHHHHHHhhhhhc-CCCCccccccccceEEEcCCcCce
Confidence 87655 78999999999999999874 567788999999999999999988 5667999999999999986 4899
Q ss_pred EEeccCCccccCCCCceeeEeeecccccccCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCccccCCCCccccHHHHHH
Q 011360 352 CISDLGLAMAIPDGYTRVLISYVLGTMAYIAPEYFQQPELSEKCDIFSFGMLLISLVRGVPSFVFHQNGEEICSPEWLRK 431 (487)
Q Consensus 352 kl~DFg~s~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DvwslG~~l~elltg~~pf~~~~~~~~~~~~~~~~~ 431 (487)
||+|+|+|........ ....|||.|||||... ..|+..+||||||+++.||+|+..||. +...+..+.+
T Consensus 186 KIGDLGLAtl~r~s~a----ksvIGTPEFMAPEmYE-E~YnE~VDVYaFGMCmLEMvT~eYPYs------EC~n~AQIYK 254 (632)
T KOG0584|consen 186 KIGDLGLATLLRKSHA----KSVIGTPEFMAPEMYE-ENYNELVDVYAFGMCMLEMVTSEYPYS------ECTNPAQIYK 254 (632)
T ss_pred eecchhHHHHhhcccc----ceeccCccccChHHHh-hhcchhhhhhhhhHHHHHHHhccCChh------hhCCHHHHHH
Confidence 9999999988766544 3467999999999988 689999999999999999999999993 3333444444
Q ss_pred HHhcCCCCCccCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCChHHHHH
Q 011360 432 VMNSKNPSRAIDPRLPGNGYEKKMLHVLKIAYICTLHDPEERPNSQYVRC 481 (487)
Q Consensus 432 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~~il~ 481 (487)
.+..+..+..+..--. .++.++|.+|+.. .++|||+.+++.
T Consensus 255 KV~SGiKP~sl~kV~d--------Pevr~fIekCl~~-~~~R~sa~eLL~ 295 (632)
T KOG0584|consen 255 KVTSGIKPAALSKVKD--------PEVREFIEKCLAT-KSERLSAKELLK 295 (632)
T ss_pred HHHcCCCHHHhhccCC--------HHHHHHHHHHhcC-chhccCHHHHhh
Confidence 4444444333332111 3588999999999 999999999985
No 202
>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as
Probab=100.00 E-value=2.9e-38 Score=305.39 Aligned_cols=254 Identities=26% Similarity=0.364 Sum_probs=198.0
Q ss_pred cccccccccccceeEEEEEecCCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCCCCccccceE
Q 011360 194 FASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQIRHRNILPLLAH 273 (487)
Q Consensus 194 ~~~~~~lg~G~~g~v~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~ 273 (487)
|+..+.||.|+||.||++.. ..+++.||+|.+... ..........+..|+.++++++|+||+.+++.
T Consensus 2 f~~~~~ig~G~~g~v~~~~~-~~~~~~~avK~~~~~------------~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~ 68 (285)
T cd05630 2 FRQYRVLGKGGFGEVCACQV-RATGKMYACKKLEKK------------RIKKRKGESMALNEKQILEKVNSRFVVSLAYA 68 (285)
T ss_pred ceeeEEeecCCCeEEEEEEE-cCCCceEEEEEEehh------------hccchHHHHHHHHHHHHHHhCCCCCeeeeeEE
Confidence 67778999999999999975 457899999987321 11112234456789999999999999999999
Q ss_pred EecCCeeEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCCEEE
Q 011360 274 MVRPDCHLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVLLNDDMEACI 353 (487)
Q Consensus 274 ~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nill~~~~~~kl 353 (487)
+...+..++||||+++++|.+++.. .....+++..+..++.|++.||.|| |+.||+||||||+||+++.++.++|
T Consensus 69 ~~~~~~~~lv~e~~~g~~L~~~l~~--~~~~~l~~~~~~~~~~qi~~~l~~l---H~~~iiH~dikp~Nil~~~~~~~~l 143 (285)
T cd05630 69 YETKDALCLVLTLMNGGDLKFHIYH--MGEAGFEEGRAVFYAAEICCGLEDL---HQERIVYRDLKPENILLDDHGHIRI 143 (285)
T ss_pred EecCCEEEEEEEecCCCcHHHHHHH--hcccCCCHHHHHHHHHHHHHHHHHH---HhCCEEeCCCCHHHEEECCCCCEEE
Confidence 9999999999999999999998864 2334688999999999999999999 6788999999999999999999999
Q ss_pred eccCCccccCCCCceeeEeeecccccccCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCccccCCCCccccHHHHHHHH
Q 011360 354 SDLGLAMAIPDGYTRVLISYVLGTMAYIAPEYFQQPELSEKCDIFSFGMLLISLVRGVPSFVFHQNGEEICSPEWLRKVM 433 (487)
Q Consensus 354 ~DFg~s~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DvwslG~~l~elltg~~pf~~~~~~~~~~~~~~~~~~~ 433 (487)
+|||++......... ....|++.|+|||++.+..++.++||||||+++|+|++|..||........ .+......
T Consensus 144 ~Dfg~~~~~~~~~~~---~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~Pf~~~~~~~~---~~~~~~~~ 217 (285)
T cd05630 144 SDLGLAVHVPEGQTI---KGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIK---REEVERLV 217 (285)
T ss_pred eeccceeecCCCccc---cCCCCCccccChHHHcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCccch---HHHHHhhh
Confidence 999998765433221 234689999999999988999999999999999999999999954322110 11111111
Q ss_pred hcCCCCCccCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCC-----hHHHHH
Q 011360 434 NSKNPSRAIDPRLPGNGYEKKMLHVLKIAYICTLHDPEERPN-----SQYVRC 481 (487)
Q Consensus 434 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs-----~~~il~ 481 (487)
.... .. .+. .....+.+++.+||+.||++||| ++++++
T Consensus 218 ~~~~--~~----~~~----~~~~~~~~li~~~l~~~p~~R~s~~~~~~~~~~~ 260 (285)
T cd05630 218 KEVQ--EE----YSE----KFSPDARSLCKMLLCKDPKERLGCQGGGAREVKE 260 (285)
T ss_pred hhhh--hh----cCc----cCCHHHHHHHHHHhhcCHHHccCCCCCchHHHHc
Confidence 1110 01 111 12245889999999999999999 788875
No 203
>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha. Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype
Probab=100.00 E-value=6.5e-38 Score=309.02 Aligned_cols=261 Identities=21% Similarity=0.329 Sum_probs=192.9
Q ss_pred cccccccc--cceeEEEEEecCCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCCCCccccceE
Q 011360 196 SLEKIGSG--GCGEVYKAELPGSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQIRHRNILPLLAH 273 (487)
Q Consensus 196 ~~~~lg~G--~~g~v~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~ 273 (487)
++++||+| +||+||++.. ..+|+.||+|++.. ..........+.+|+.+++.++||||++++++
T Consensus 2 ~~~~ig~G~~~~~~v~~~~~-~~~~~~vaiK~~~~-------------~~~~~~~~~~~~~e~~~l~~l~hpniv~~~~~ 67 (327)
T cd08227 2 LLTVIGRGFEDLMTVNLARY-KPTGEYVTVRRINL-------------EACTNEMVTFLQGELHVSKLFNHPNIVPYRAT 67 (327)
T ss_pred hhhhccccccceEEEEEEee-cccCcEEEEEEech-------------hhccHHHHHHHHHHHHHHHhcCCCCeeeEEEE
Confidence 45789999 7899999974 46899999998732 11123345567789999999999999999999
Q ss_pred EecCCeeEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCCEEE
Q 011360 274 MVRPDCHLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVLLNDDMEACI 353 (487)
Q Consensus 274 ~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nill~~~~~~kl 353 (487)
+..++..++||||+++|+|.+++... ....+++..++.++.|++.||.|| |++||+||||||+||+++.++.+++
T Consensus 68 ~~~~~~~~lv~e~~~~~~l~~~~~~~--~~~~l~~~~~~~i~~qi~~~L~~L---H~~~iiH~dlkp~Nil~~~~~~~~l 142 (327)
T cd08227 68 FIADNELWVVTSFMAYGSAKDLICTH--FMDGMSELAIAYILQGVLKALDYI---HHMGYVHRSVKASHILISVDGKVYL 142 (327)
T ss_pred EEECCEEEEEEeccCCCcHHHHHHhh--ccCCCCHHHHHHHHHHHHHHHHHH---HHCCEecCCCChhhEEEecCCcEEE
Confidence 99999999999999999999998642 234588999999999999999999 7788999999999999999999999
Q ss_pred eccCCccccCCCCcee-----eEeeecccccccCCcccCC--CCCCchhHHHHHHHHHHHHHhCCCCccccCCCCccccH
Q 011360 354 SDLGLAMAIPDGYTRV-----LISYVLGTMAYIAPEYFQQ--PELSEKCDIFSFGMLLISLVRGVPSFVFHQNGEEICSP 426 (487)
Q Consensus 354 ~DFg~s~~~~~~~~~~-----~~~~~~gt~~y~aPE~l~~--~~~~~~~DvwslG~~l~elltg~~pf~~~~~~~~~~~~ 426 (487)
+||+.+.......... ......++..|+|||++.+ ..++.++|||||||++|+|++|..||......
T Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~------ 216 (327)
T cd08227 143 SGLRSNLSMINHGQRLRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPAT------ 216 (327)
T ss_pred cccchhhccccccccccccccccccccceecccChHHhhcccCCCCchhhHHHHHHHHHHHHHCCCCCCCcchh------
Confidence 9998654432211100 0122346778999999876 46899999999999999999999999532210
Q ss_pred HHHHHHHhcCCCC------------------CccCC----------CCC-------CCCcHHHHHHHHHHHhhccCCCCC
Q 011360 427 EWLRKVMNSKNPS------------------RAIDP----------RLP-------GNGYEKKMLHVLKIAYICTLHDPE 471 (487)
Q Consensus 427 ~~~~~~~~~~~~~------------------~~~~~----------~~~-------~~~~~~~~~~l~~li~~cl~~~P~ 471 (487)
...........+. ...+. ..+ .........++.+++.+||+.||+
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~ 296 (327)
T cd08227 217 QMLLEKLNGTVPCLLDTTTIPAEELTMKPSRSGANSGLGESTTVSTPRPSNGESSSHPYNRTFSPHFHHFVEQCLQRNPD 296 (327)
T ss_pred HHHHHHhcCCccccccccchhhhhcccCCcccCCcCCCCcccccCCcCccccCCcccccccccCHHHHHHHHHHHhhCch
Confidence 0111111000000 00000 000 001123345788999999999999
Q ss_pred CCCChHHHHH
Q 011360 472 ERPNSQYVRC 481 (487)
Q Consensus 472 ~RPs~~~il~ 481 (487)
+|||+.++++
T Consensus 297 ~Rpt~~ell~ 306 (327)
T cd08227 297 ARPSASTLLN 306 (327)
T ss_pred hcCCHHHHhc
Confidence 9999999975
No 204
>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea
Probab=100.00 E-value=9.7e-38 Score=300.69 Aligned_cols=258 Identities=20% Similarity=0.283 Sum_probs=200.7
Q ss_pred cccccccccccccceeEEEEEecCCC---CceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCCCCcc
Q 011360 192 DCFASLEKIGSGGCGEVYKAELPGSN---GKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQIRHRNIL 268 (487)
Q Consensus 192 ~~~~~~~~lg~G~~g~v~~~~~~~~~---~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv 268 (487)
.+|.+.+.||.|+||.||+|.+.... ...+|+|.+... ........+.+|+.++..++||||+
T Consensus 7 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~--------------~~~~~~~~~~~e~~~l~~l~h~~i~ 72 (279)
T cd05057 7 TELEKIKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREE--------------TSPKANKEILDEAYVMASVDHPHVV 72 (279)
T ss_pred HHcEEcceecCCCCccEEEEEEecCCCCcceEEEEEeccCC--------------CCHHHHHHHHHHHHHHHhCCCCCcc
Confidence 45899999999999999999864221 236888876321 1133456788899999999999999
Q ss_pred ccceEEecCCeeEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCC
Q 011360 269 PLLAHMVRPDCHLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVLLNDD 348 (487)
Q Consensus 269 ~l~~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nill~~~ 348 (487)
++++++.. ...++||||+++|+|.+++.. ....+++..+..++.|++.||+|| |++|++||||+|+||+++.+
T Consensus 73 ~~~~~~~~-~~~~~v~e~~~~g~L~~~l~~---~~~~~~~~~~~~~~~qi~~~l~~L---H~~~i~H~di~p~nil~~~~ 145 (279)
T cd05057 73 RLLGICLS-SQVQLITQLMPLGCLLDYVRN---HKDNIGSQYLLNWCVQIAKGMSYL---EEKRLVHRDLAARNVLVKTP 145 (279)
T ss_pred eEEEEEec-CceEEEEecCCCCcHHHHHHh---ccCCCCHHHHHHHHHHHHHHHHHH---HhCCEEecccCcceEEEcCC
Confidence 99999887 788999999999999999864 234589999999999999999999 67899999999999999999
Q ss_pred CCEEEeccCCccccCCCCceeeEeeecccccccCCcccCCCCCCchhHHHHHHHHHHHHHh-CCCCccccCCCCccccHH
Q 011360 349 MEACISDLGLAMAIPDGYTRVLISYVLGTMAYIAPEYFQQPELSEKCDIFSFGMLLISLVR-GVPSFVFHQNGEEICSPE 427 (487)
Q Consensus 349 ~~~kl~DFg~s~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DvwslG~~l~ellt-g~~pf~~~~~~~~~~~~~ 427 (487)
+.+||+|||+++...............++..|+|||.+....++.++|+||||+++||+++ |..||.... .+
T Consensus 146 ~~~kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~-------~~ 218 (279)
T cd05057 146 QHVKITDFGLAKLLDVDEKEYHAEGGKVPIKWMALESILHRIYTHKSDVWSYGVTVWELMTFGAKPYEGIP-------AV 218 (279)
T ss_pred CeEEECCCcccccccCcccceecCCCcccccccCHHHhhcCCcCchhhHHHHHHHHHHHhcCCCCCCCCCC-------HH
Confidence 9999999999987654332221122224678999999988889999999999999999998 999994322 12
Q ss_pred HHHHHHhcCCCCCccCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCChHHHHHHHhhh
Q 011360 428 WLRKVMNSKNPSRAIDPRLPGNGYEKKMLHVLKIAYICTLHDPEERPNSQYVRCRLSQL 486 (487)
Q Consensus 428 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~~il~~L~~l 486 (487)
............ . .+.. ....+.+++.+||..+|++|||+.++++.|+++
T Consensus 219 ~~~~~~~~~~~~-~----~~~~----~~~~~~~~~~~~l~~~p~~Rp~~~~l~~~l~~~ 268 (279)
T cd05057 219 EIPDLLEKGERL-P----QPPI----CTIDVYMVLVKCWMIDAESRPTFKELINEFSKM 268 (279)
T ss_pred HHHHHHhCCCCC-C----CCCC----CCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHH
Confidence 222222222110 1 1111 124588999999999999999999999999875
No 205
>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan
Probab=100.00 E-value=1.1e-37 Score=296.48 Aligned_cols=254 Identities=26% Similarity=0.394 Sum_probs=202.0
Q ss_pred cccccccceeEEEEEecC--CCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCCCCccccceEEe
Q 011360 198 EKIGSGGCGEVYKAELPG--SNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQIRHRNILPLLAHMV 275 (487)
Q Consensus 198 ~~lg~G~~g~v~~~~~~~--~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~ 275 (487)
+.||.|+||.||+|.... ..+..|++|.+... ........+.+|+..+..++||||+++++++.
T Consensus 1 ~~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~--------------~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~ 66 (262)
T cd00192 1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKED--------------ASEEERKDFLKEARVMKKLGHPNVVRLLGVCT 66 (262)
T ss_pred CccccCCceEEEEEEEecCCCCCceEEeEeeccc--------------cchhHHHHHHHHHHHHhhcCCCChheeeeeec
Confidence 468999999999998642 22788999987431 11114567889999999999999999999999
Q ss_pred cCCeeEEEEEecCCCCHHHHHhhhhcC-----CCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCC
Q 011360 276 RPDCHLLVYEFMKNGSLQDILDDVSRG-----RRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVLLNDDME 350 (487)
Q Consensus 276 ~~~~~~lv~E~~~~gsL~~~l~~~~~~-----~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nill~~~~~ 350 (487)
.....+++|||+++++|.+++...... ...+++..+..++.|++.||.|| |++|++|+||+|+||+++.++.
T Consensus 67 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~l---H~~~i~H~di~p~nili~~~~~ 143 (262)
T cd00192 67 EEEPLYLVLEYMEGGDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYL---ASKKFVHRDLAARNCLVGEDLV 143 (262)
T ss_pred CCCceEEEEEeccCCcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHH---HcCCcccCccCcceEEECCCCc
Confidence 999999999999999999999763211 36789999999999999999999 7788999999999999999999
Q ss_pred EEEeccCCccccCCCCceeeEeeecccccccCCcccCCCCCCchhHHHHHHHHHHHHHh-CCCCccccCCCCccccHHHH
Q 011360 351 ACISDLGLAMAIPDGYTRVLISYVLGTMAYIAPEYFQQPELSEKCDIFSFGMLLISLVR-GVPSFVFHQNGEEICSPEWL 429 (487)
Q Consensus 351 ~kl~DFg~s~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DvwslG~~l~ellt-g~~pf~~~~~~~~~~~~~~~ 429 (487)
++|+|||.+................+++.|+|||.+....++.++||||||+++|+|++ |..||.... ..+..
T Consensus 144 ~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~------~~~~~ 217 (262)
T cd00192 144 VKISDFGLSRDVYDDDYYRKKTGGKLPIRWMAPESLKDGIFTSKSDVWSFGVLLWEIFTLGATPYPGLS------NEEVL 217 (262)
T ss_pred EEEcccccccccccccccccccCCCcCccccCHHHhccCCcchhhccHHHHHHHHHHHhcCCCCCCCCC------HHHHH
Confidence 99999999987765432222234557889999999988889999999999999999999 599994431 22223
Q ss_pred HHHHhcCCCCCccCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCChHHHHHHHh
Q 011360 430 RKVMNSKNPSRAIDPRLPGNGYEKKMLHVLKIAYICTLHDPEERPNSQYVRCRLS 484 (487)
Q Consensus 430 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~~il~~L~ 484 (487)
......... . .+. ..+.++.+++.+||..+|++|||+.++++.|+
T Consensus 218 ~~~~~~~~~--~----~~~----~~~~~~~~li~~~l~~~p~~Rps~~~l~~~l~ 262 (262)
T cd00192 218 EYLRKGYRL--P----KPE----YCPDELYELMLSCWQLDPEDRPTFSELVERLE 262 (262)
T ss_pred HHHHcCCCC--C----CCc----cCChHHHHHHHHHccCCcccCcCHHHHHHhhC
Confidence 333221111 1 111 12356889999999999999999999999874
No 206
>PTZ00266 NIMA-related protein kinase; Provisional
Probab=100.00 E-value=3.5e-38 Score=336.60 Aligned_cols=257 Identities=21% Similarity=0.327 Sum_probs=198.6
Q ss_pred cccccccccccccceeEEEEEecCCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCCCCccccc
Q 011360 192 DCFASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQIRHRNILPLL 271 (487)
Q Consensus 192 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~ 271 (487)
+.|.+++.||.|+||.||++.. ..++..+|+|.+... .........+..|+.++.+++|||||+++
T Consensus 13 ~~YeIl~kLG~GgFGtVYLAkd-k~tg~~vAlKvIk~~-------------~l~e~~~~~~~~EI~IL~~L~HPNIVrl~ 78 (1021)
T PTZ00266 13 NEYEVIKKIGNGRFGEVFLVKH-KRTQEFFCWKAISYR-------------GLKEREKSQLVIEVNVMRELKHKNIVRYI 78 (1021)
T ss_pred CCEEEEEEEecCCCeEEEEEEE-CCCCeEEEEEEEecc-------------ccCHHHHHHHHHHHHHHHHcCCCCcCeEE
Confidence 4699999999999999999975 457889999987431 12233456788899999999999999999
Q ss_pred eEEec--CCeeEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcC----CCCeeecCCCCCCEEe
Q 011360 272 AHMVR--PDCHLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYH----SASIIHGDIKPRNVLL 345 (487)
Q Consensus 272 ~~~~~--~~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h----~~givH~Dlkp~Nill 345 (487)
++|.. ...+||||||+++|+|.++|.........+++..++.|+.||+.||.|||... ..+||||||||+|||+
T Consensus 79 d~f~de~~~~lyIVMEY~~gGSL~~lL~k~~~~~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLKPeNILL 158 (1021)
T PTZ00266 79 DRFLNKANQKLYILMEFCDAGDLSRNIQKCYKMFGKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIFL 158 (1021)
T ss_pred EEEEecCCCEEEEEEeCCCCCcHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhcccccccCCceeccCcHHHeEe
Confidence 98864 35689999999999999999765444567999999999999999999996532 2569999999999999
Q ss_pred CC-----------------CCCEEEeccCCccccCCCCceeeEeeecccccccCCcccCC--CCCCchhHHHHHHHHHHH
Q 011360 346 ND-----------------DMEACISDLGLAMAIPDGYTRVLISYVLGTMAYIAPEYFQQ--PELSEKCDIFSFGMLLIS 406 (487)
Q Consensus 346 ~~-----------------~~~~kl~DFg~s~~~~~~~~~~~~~~~~gt~~y~aPE~l~~--~~~~~~~DvwslG~~l~e 406 (487)
+. .+.+||+|||++........ .....||+.|+|||++.+ ..++.++|||||||++|+
T Consensus 159 ~s~~~~lg~i~~~~~n~ng~~iVKLsDFGlAr~l~~~s~---~~s~vGTp~YmAPEvL~ge~~~~s~KSDVWSLG~ILYE 235 (1021)
T PTZ00266 159 STGIRHIGKITAQANNLNGRPIAKIGDFGLSKNIGIESM---AHSCVGTPYYWSPELLLHETKSYDDKSDMWALGCIIYE 235 (1021)
T ss_pred ecCccccccccccccccCCCCceEEccCCcccccccccc---ccccCCCccccCHHHHhccCCCCCchhHHHHHHHHHHH
Confidence 64 23489999999976543322 133468999999999864 458899999999999999
Q ss_pred HHhCCCCccccCCCCccccHHHHHHHHhcCCCCCccCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCChHHHHH
Q 011360 407 LVRGVPSFVFHQNGEEICSPEWLRKVMNSKNPSRAIDPRLPGNGYEKKMLHVLKIAYICTLHDPEERPNSQYVRC 481 (487)
Q Consensus 407 lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~~il~ 481 (487)
|+||..||..... ...+...+... +. ++.. ..+.++.++|..||+.+|.+|||+.+++.
T Consensus 236 LLTGk~PF~~~~~------~~qli~~lk~~-p~------lpi~---~~S~eL~dLI~~~L~~dPeeRPSa~QlL~ 294 (1021)
T PTZ00266 236 LCSGKTPFHKANN------FSQLISELKRG-PD------LPIK---GKSKELNILIKNLLNLSAKERPSALQCLG 294 (1021)
T ss_pred HHHCCCCCCcCCc------HHHHHHHHhcC-CC------CCcC---CCCHHHHHHHHHHhcCChhHCcCHHHHhc
Confidence 9999999943221 11222222211 11 1111 12356889999999999999999999884
No 207
>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l
Probab=100.00 E-value=7.6e-38 Score=299.99 Aligned_cols=253 Identities=25% Similarity=0.352 Sum_probs=193.8
Q ss_pred cccccccceeEEEEEecCCCCc--eEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccC-CCCCccccceEE
Q 011360 198 EKIGSGGCGEVYKAELPGSNGK--MIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQI-RHRNILPLLAHM 274 (487)
Q Consensus 198 ~~lg~G~~g~v~~~~~~~~~~~--~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpnIv~l~~~~ 274 (487)
+.||.|+||.||+|... .++. .+++|.+.. .........+..|+.++.++ .||||+++++++
T Consensus 1 ~~lg~g~~g~v~~~~~~-~~~~~~~~~~k~~~~--------------~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~ 65 (270)
T cd05047 1 DVIGEGNFGQVLKARIK-KDGLRMDAAIKRMKE--------------YASKDDHRDFAGELEVLCKLGHHPNIINLLGAC 65 (270)
T ss_pred CcCCCCCCceEEEEEEc-CCCCeeEEEEEEccc--------------cCCHHHHHHHHHHHHHHHhhccCCCeeeEEEEE
Confidence 36899999999999864 3443 468887631 11223445678899999999 899999999999
Q ss_pred ecCCeeEEEEEecCCCCHHHHHhhhhc------------CCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCC
Q 011360 275 VRPDCHLLVYEFMKNGSLQDILDDVSR------------GRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRN 342 (487)
Q Consensus 275 ~~~~~~~lv~E~~~~gsL~~~l~~~~~------------~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~N 342 (487)
...+..+++|||+++|+|.+++..... ....+++..+..++.|++.||+|| |++|++||||||+|
T Consensus 66 ~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~l---H~~~i~H~dikp~n 142 (270)
T cd05047 66 EHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYL---SQKQFIHRDLAARN 142 (270)
T ss_pred ecCCCceEEEEeCCCCcHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHH---HHCCEeecccccce
Confidence 999999999999999999999865221 123578899999999999999999 67899999999999
Q ss_pred EEeCCCCCEEEeccCCccccCCCCceeeEeeecccccccCCcccCCCCCCchhHHHHHHHHHHHHHh-CCCCccccCCCC
Q 011360 343 VLLNDDMEACISDLGLAMAIPDGYTRVLISYVLGTMAYIAPEYFQQPELSEKCDIFSFGMLLISLVR-GVPSFVFHQNGE 421 (487)
Q Consensus 343 ill~~~~~~kl~DFg~s~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DvwslG~~l~ellt-g~~pf~~~~~~~ 421 (487)
|+++.++.+||+|||++......... .....++.|+|||++.+..++.++||||||+++|+|++ |..||....
T Consensus 143 ili~~~~~~kl~dfgl~~~~~~~~~~---~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~--- 216 (270)
T cd05047 143 ILVGENYVAKIADFGLSRGQEVYVKK---TMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMT--- 216 (270)
T ss_pred EEEcCCCeEEECCCCCccccchhhhc---cCCCCccccCChHHHccCCCCchhhHHHHHHHHHHHHcCCCCCccccC---
Confidence 99999999999999998532211111 11224567999999988889999999999999999997 999994322
Q ss_pred ccccHHHHHHHHhcCCCCCccCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCChHHHHHHHhhhC
Q 011360 422 EICSPEWLRKVMNSKNPSRAIDPRLPGNGYEKKMLHVLKIAYICTLHDPEERPNSQYVRCRLSQLL 487 (487)
Q Consensus 422 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~~il~~L~~ll 487 (487)
..+........... ..+. ....++.+++.+||+.+|.+|||+.+++..|+.++
T Consensus 217 ---~~~~~~~~~~~~~~------~~~~----~~~~~~~~li~~~l~~~p~~Rps~~~il~~l~~~~ 269 (270)
T cd05047 217 ---CAELYEKLPQGYRL------EKPL----NCDDEVYDLMRQCWREKPYERPSFAQILVSLNRML 269 (270)
T ss_pred ---HHHHHHHHhCCCCC------CCCC----cCCHHHHHHHHHHcccChhhCCCHHHHHHHHHHhh
Confidence 12222222211111 0111 12346889999999999999999999999998875
No 208
>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.
Probab=100.00 E-value=1.4e-37 Score=297.93 Aligned_cols=267 Identities=25% Similarity=0.435 Sum_probs=207.0
Q ss_pred cccccccccccceeEEEEEecCCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhcc-CCCCCccccce
Q 011360 194 FASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQ-IRHRNILPLLA 272 (487)
Q Consensus 194 ~~~~~~lg~G~~g~v~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~-l~hpnIv~l~~ 272 (487)
|.+.+.||.|+||.||+|.....++..+|+|.+........ +...........+..|+.++.. ++||||+++++
T Consensus 2 y~~~~~ig~G~~~~v~~~~~~~~~~~~~avk~~~~~~~~~~-----~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~ 76 (269)
T cd08528 2 YAVLEHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFG-----KDKRERDKSIGDIVSEVTIIKEQLRHPNIVRYYK 76 (269)
T ss_pred chhhhhhcCCCCceEEEEEEcCCCCceeeeeEeeccccccc-----cccccchHHHHHHHHHHHHHhhcCCCCCeeeEEe
Confidence 78889999999999999987654678999998754221110 0011223445667788887764 79999999999
Q ss_pred EEecCCeeEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCCEE
Q 011360 273 HMVRPDCHLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVLLNDDMEAC 352 (487)
Q Consensus 273 ~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nill~~~~~~k 352 (487)
++..++..+++|||+++++|.+++.........+++..++.++.|++.||.||| +..|++|+||+|+||+++.++.++
T Consensus 77 ~~~~~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh--~~~~i~H~dl~~~nil~~~~~~~~ 154 (269)
T cd08528 77 TFLENDRLYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALRYLH--KEKRIVHRDLTPNNIMLGEDDKVT 154 (269)
T ss_pred eEccCCeEEEEEecCCCCcHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHhc--cCCceeecCCCHHHEEECCCCcEE
Confidence 999999999999999999999998765455667899999999999999999994 146899999999999999999999
Q ss_pred EeccCCccccCCCCceeeEeeecccccccCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCccccCCCCccccHHHHHHH
Q 011360 353 ISDLGLAMAIPDGYTRVLISYVLGTMAYIAPEYFQQPELSEKCDIFSFGMLLISLVRGVPSFVFHQNGEEICSPEWLRKV 432 (487)
Q Consensus 353 l~DFg~s~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DvwslG~~l~elltg~~pf~~~~~~~~~~~~~~~~~~ 432 (487)
|+|||.+....... ......|+..|+|||.+.+..++.++|+||||+++|+|++|.+||.... ........
T Consensus 155 l~dfg~~~~~~~~~---~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~ll~~l~~g~~p~~~~~------~~~~~~~~ 225 (269)
T cd08528 155 ITDFGLAKQKQPES---KLTSVVGTILYSCPEIVKNEPYGEKADVWAFGCILYQMCTLQPPFYSTN------MLSLATKI 225 (269)
T ss_pred Eecccceeeccccc---ccccccCcccCcChhhhcCCCCchHHHHHHHHHHHHHHHhCCCcccccC------HHHHHHHH
Confidence 99999997654432 1234568899999999998889999999999999999999999994321 11222222
Q ss_pred HhcCCCCCccCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCChHHHHHHHhh
Q 011360 433 MNSKNPSRAIDPRLPGNGYEKKMLHVLKIAYICTLHDPEERPNSQYVRCRLSQ 485 (487)
Q Consensus 433 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~~il~~L~~ 485 (487)
.. ...... +. ...+..+.+++.+||+.||++|||+.++.+.+++
T Consensus 226 ~~-~~~~~~-----~~---~~~~~~l~~li~~cl~~~p~~Rp~~~e~~~~~~~ 269 (269)
T cd08528 226 VE-AVYEPL-----PE---GMYSEDVTDVITSCLTPDAEARPDIIQVSAMISD 269 (269)
T ss_pred hh-ccCCcC-----Cc---ccCCHHHHHHHHHHCCCCCccCCCHHHHHHHhcC
Confidence 21 111111 11 1123568899999999999999999999998863
No 209
>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase. Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ
Probab=100.00 E-value=5.9e-38 Score=300.90 Aligned_cols=252 Identities=26% Similarity=0.384 Sum_probs=194.0
Q ss_pred ccccccccccccccceeEEEEEecCCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccC-CCCCccc
Q 011360 191 EDCFASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQI-RHRNILP 269 (487)
Q Consensus 191 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpnIv~ 269 (487)
.+.|.+.+.||.|+||.||+|.. ..++..||+|.+... ......+..|+.++..+ +||||++
T Consensus 5 ~~~y~~~~~lg~g~~g~vy~~~~-~~~~~~~aik~~~~~----------------~~~~~~~~~e~~~l~~~~~h~~i~~ 67 (272)
T cd06637 5 AGIFELVELVGNGTYGQVYKGRH-VKTGQLAAIKVMDVT----------------GDEEEEIKQEINMLKKYSHHRNIAT 67 (272)
T ss_pred hhhhhHHHheeecCCeEEEEEEE-cCCCcEEEEEEEEcC----------------CccHHHHHHHHHHHHHhcCCCCeee
Confidence 34688899999999999999975 457889999987321 11234567788888888 7999999
Q ss_pred cceEEecC------CeeEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCE
Q 011360 270 LLAHMVRP------DCHLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNV 343 (487)
Q Consensus 270 l~~~~~~~------~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Ni 343 (487)
+++++... ...|++|||+++++|.+++.. .....+++..+..++.|++.||+|| |+++|+|+||+|+||
T Consensus 68 ~~~~~~~~~~~~~~~~~~iv~e~~~~~~L~~~l~~--~~~~~l~~~~~~~~~~qi~~~l~~L---H~~~ivh~dl~~~ni 142 (272)
T cd06637 68 YYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKN--TKGNTLKEEWIAYICREILRGLSHL---HQHKVIHRDIKGQNV 142 (272)
T ss_pred EeeEEeecCCCCCCcEEEEEEEcCCCCcHHHHHHh--ccCCCCCHHHHHHHHHHHHHHHHHH---HHCCCccCCCCHHHE
Confidence 99988753 457999999999999999875 2345688999999999999999999 667899999999999
Q ss_pred EeCCCCCEEEeccCCccccCCCCceeeEeeecccccccCCcccC-----CCCCCchhHHHHHHHHHHHHHhCCCCccccC
Q 011360 344 LLNDDMEACISDLGLAMAIPDGYTRVLISYVLGTMAYIAPEYFQ-----QPELSEKCDIFSFGMLLISLVRGVPSFVFHQ 418 (487)
Q Consensus 344 ll~~~~~~kl~DFg~s~~~~~~~~~~~~~~~~gt~~y~aPE~l~-----~~~~~~~~DvwslG~~l~elltg~~pf~~~~ 418 (487)
+++.++.++|+|||++......... .....|++.|+|||++. +..++.++|||||||++|+|++|..||....
T Consensus 143 li~~~~~~~l~Dfg~~~~~~~~~~~--~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGv~l~el~~g~~p~~~~~ 220 (272)
T cd06637 143 LLTENAEVKLVDFGVSAQLDRTVGR--RNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMH 220 (272)
T ss_pred EECCCCCEEEccCCCceeccccccc--CCcccccccccCHhHhccccCcCCCCCchhhHHHHHHHHHHHHhCCCCccccC
Confidence 9999999999999998765432211 13456899999999986 3468889999999999999999999994322
Q ss_pred CCCccccHHHHHHHHhcCCCCCccCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCChHHHHH
Q 011360 419 NGEEICSPEWLRKVMNSKNPSRAIDPRLPGNGYEKKMLHVLKIAYICTLHDPEERPNSQYVRC 481 (487)
Q Consensus 419 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~~il~ 481 (487)
. ......... .......+. ..+.++.+++.+||..+|.+|||+.+++.
T Consensus 221 ~------~~~~~~~~~-~~~~~~~~~--------~~~~~~~~li~~~l~~~p~~Rpt~~~il~ 268 (272)
T cd06637 221 P------MRALFLIPR-NPAPRLKSK--------KWSKKFQSFIESCLVKNHSQRPTTEQLMK 268 (272)
T ss_pred H------HHHHHHHhc-CCCCCCCCC--------CcCHHHHHHHHHHcCCChhhCCCHHHHhh
Confidence 1 111111111 111111111 12356889999999999999999999875
No 210
>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok
Probab=100.00 E-value=2.7e-38 Score=315.33 Aligned_cols=264 Identities=25% Similarity=0.326 Sum_probs=194.9
Q ss_pred ccccccccccccccceeEEEEEecCCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCCCCcccc
Q 011360 191 EDCFASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQIRHRNILPL 270 (487)
Q Consensus 191 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l 270 (487)
.++|.+.+.||.|+||.||++. +..+++.||+|++... .........+.+|+.+++.++||||+++
T Consensus 16 ~~~y~~~~~lg~G~~g~V~~~~-~~~~~~~vaiK~~~~~-------------~~~~~~~~~~~~E~~~l~~l~h~niv~~ 81 (355)
T cd07874 16 LKRYQNLKPIGSGAQGIVCAAY-DAVLDRNVAIKKLSRP-------------FQNQTHAKRAYRELVLMKCVNHKNIISL 81 (355)
T ss_pred hhceeEEEEeeecCCEEEEEEE-ecCCCceEEEEEeCCc-------------ccChHHHHHHHHHHHHHHHhCCCchhce
Confidence 3579999999999999999996 4567899999987421 1122334567789999999999999999
Q ss_pred ceEEecC------CeeEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEE
Q 011360 271 LAHMVRP------DCHLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVL 344 (487)
Q Consensus 271 ~~~~~~~------~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nil 344 (487)
++++... ...|+||||+++ +|.+.+. ..+++..+..++.|++.||.|| |++||+||||||+|||
T Consensus 82 ~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~------~~l~~~~~~~~~~qi~~aL~~L---H~~givHrDikp~Nil 151 (355)
T cd07874 82 LNVFTPQKSLEEFQDVYLVMELMDA-NLCQVIQ------MELDHERMSYLLYQMLCGIKHL---HSAGIIHRDLKPSNIV 151 (355)
T ss_pred eeeeeccccccccceeEEEhhhhcc-cHHHHHh------hcCCHHHHHHHHHHHHHHHHHH---HhCCcccCCCChHHEE
Confidence 9988644 346999999965 6766664 2478888999999999999999 7889999999999999
Q ss_pred eCCCCCEEEeccCCccccCCCCceeeEeeecccccccCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCccccCCCCcc-
Q 011360 345 LNDDMEACISDLGLAMAIPDGYTRVLISYVLGTMAYIAPEYFQQPELSEKCDIFSFGMLLISLVRGVPSFVFHQNGEEI- 423 (487)
Q Consensus 345 l~~~~~~kl~DFg~s~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DvwslG~~l~elltg~~pf~~~~~~~~~- 423 (487)
++.++.+||+|||+++....... .....||+.|+|||++.+..++.++|||||||++|+|++|..||.........
T Consensus 152 l~~~~~~kl~Dfg~~~~~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~ 228 (355)
T cd07874 152 VKSDCTLKILDFGLARTAGTSFM---MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWN 228 (355)
T ss_pred ECCCCCEEEeeCcccccCCCccc---cCCccccCCccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHH
Confidence 99999999999999976543322 13356899999999999989999999999999999999999999543211000
Q ss_pred --------ccHHH-------HHHHHhcC-CCCC-ccCCC-----CC--CCCcHHHHHHHHHHHhhccCCCCCCCCChHHH
Q 011360 424 --------CSPEW-------LRKVMNSK-NPSR-AIDPR-----LP--GNGYEKKMLHVLKIAYICTLHDPEERPNSQYV 479 (487)
Q Consensus 424 --------~~~~~-------~~~~~~~~-~~~~-~~~~~-----~~--~~~~~~~~~~l~~li~~cl~~~P~~RPs~~~i 479 (487)
..+++ ........ .... .++.. .+ ..........+.+++.+||..||++|||+.++
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rps~~el 308 (355)
T cd07874 229 KVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDEA 308 (355)
T ss_pred HHHHHhCCCCHHHHHhhcHHHHHHHhcCCccccccchhhccccccccccccccccchHHHHHHHHHhcCCchhcCCHHHH
Confidence 00010 01111100 0000 00000 00 01111234568899999999999999999999
Q ss_pred HH
Q 011360 480 RC 481 (487)
Q Consensus 480 l~ 481 (487)
++
T Consensus 309 l~ 310 (355)
T cd07874 309 LQ 310 (355)
T ss_pred hc
Confidence 86
No 211
>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play
Probab=100.00 E-value=3.4e-38 Score=308.55 Aligned_cols=262 Identities=20% Similarity=0.329 Sum_probs=194.9
Q ss_pred cccccccccccccceeEEEEEecCCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCCCCccccc
Q 011360 192 DCFASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQIRHRNILPLL 271 (487)
Q Consensus 192 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~ 271 (487)
+.|.+.+.||.|+||.||+|+. ..++..||+|.+.... .......+.+|+.+++.++||||++++
T Consensus 6 ~~y~~~~~lg~G~~g~Vy~~~~-~~~~~~vaiK~~~~~~--------------~~~~~~~~~~E~~~l~~l~h~~iv~~~ 70 (309)
T cd07872 6 ETYIKLEKLGEGTYATVFKGRS-KLTENLVALKEIRLEH--------------EEGAPCTAIREVSLLKDLKHANIVTLH 70 (309)
T ss_pred CceEEEEEecccCCEEEEEEEe-cCCCCeEEEEEeeccc--------------cCCcchhHHHHHHHHHhCCCCCcceEE
Confidence 4699999999999999999975 4578899999884311 111223456799999999999999999
Q ss_pred eEEecCCeeEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCCE
Q 011360 272 AHMVRPDCHLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVLLNDDMEA 351 (487)
Q Consensus 272 ~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nill~~~~~~ 351 (487)
+++..++..++||||+++ +|.+++.. .+..+++..+..++.|++.||.|| |++||+||||||+||+++.++.+
T Consensus 71 ~~~~~~~~~~lv~e~~~~-~l~~~~~~---~~~~~~~~~~~~~~~qi~~aL~~l---H~~~ivH~dlkp~Nill~~~~~~ 143 (309)
T cd07872 71 DIVHTDKSLTLVFEYLDK-DLKQYMDD---CGNIMSMHNVKIFLYQILRGLAYC---HRRKVLHRDLKPQNLLINERGEL 143 (309)
T ss_pred EEEeeCCeEEEEEeCCCC-CHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHH---HHCCeecCCCCHHHEEECCCCCE
Confidence 999999999999999965 88887754 244578899999999999999999 77899999999999999999999
Q ss_pred EEeccCCccccCCCCceeeEeeecccccccCCcccCC-CCCCchhHHHHHHHHHHHHHhCCCCccccCCCCccccHHHHH
Q 011360 352 CISDLGLAMAIPDGYTRVLISYVLGTMAYIAPEYFQQ-PELSEKCDIFSFGMLLISLVRGVPSFVFHQNGEEICSPEWLR 430 (487)
Q Consensus 352 kl~DFg~s~~~~~~~~~~~~~~~~gt~~y~aPE~l~~-~~~~~~~DvwslG~~l~elltg~~pf~~~~~~~~~~~~~~~~ 430 (487)
||+|||++......... .....+++.|+|||.+.+ ..++.++||||||+++|+|+||.+||...+..... ....
T Consensus 144 kl~Dfg~~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~---~~~~ 218 (309)
T cd07872 144 KLADFGLARAKSVPTKT--YSNEVVTLWYRPPDVLLGSSEYSTQIDMWGVGCIFFEMASGRPLFPGSTVEDEL---HLIF 218 (309)
T ss_pred EECccccceecCCCccc--cccccccccccCCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHH---HHHH
Confidence 99999998764332211 123457899999998865 46899999999999999999999999544321110 0000
Q ss_pred HHHhcCCCCCc----------cCCCCCC-------CCcHHHHHHHHHHHhhccCCCCCCCCChHHHHH
Q 011360 431 KVMNSKNPSRA----------IDPRLPG-------NGYEKKMLHVLKIAYICTLHDPEERPNSQYVRC 481 (487)
Q Consensus 431 ~~~~~~~~~~~----------~~~~~~~-------~~~~~~~~~l~~li~~cl~~~P~~RPs~~~il~ 481 (487)
.... ..+... .+...+. ......+.++.+++.+||+.||.+|||+.+++.
T Consensus 219 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~ 285 (309)
T cd07872 219 RLLG-TPTEETWPGISSNDEFKNYNFPKYKPQPLINHAPRLDTEGIELLTKFLQYESKKRISAEEAMK 285 (309)
T ss_pred HHhC-CCCHHHHhhhcchhhhhhhhcCccCCCchhhhccCCCHHHHHHHHHhccCChhhCCCHHHHhc
Confidence 0000 000000 0000000 011123456889999999999999999999875
No 212
>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer. Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c
Probab=100.00 E-value=2.1e-37 Score=293.32 Aligned_cols=248 Identities=26% Similarity=0.345 Sum_probs=194.1
Q ss_pred cccccccceeEEEEEecCCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCCCCccccceEEecC
Q 011360 198 EKIGSGGCGEVYKAELPGSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQIRHRNILPLLAHMVRP 277 (487)
Q Consensus 198 ~~lg~G~~g~v~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~ 277 (487)
+.||.|+||.||+|... ++..+|+|.+... ........+.+|+.+++.++||||+++++++...
T Consensus 1 ~~ig~g~~g~vy~~~~~--~~~~~a~K~~~~~--------------~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~ 64 (250)
T cd05085 1 ELLGKGNFGEVFKGTLK--DKTPVAVKTCKED--------------LPQELKIKFLSEARILKQYDHPNIVKLIGVCTQR 64 (250)
T ss_pred CccCCCCCceEEEEEec--CCcEEEEEecCCc--------------CCHHHHHHHHHHHHHHHhCCCCCcCeEEEEEecC
Confidence 36899999999999753 6788999987321 1122334678899999999999999999999999
Q ss_pred CeeEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCCEEEeccC
Q 011360 278 DCHLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVLLNDDMEACISDLG 357 (487)
Q Consensus 278 ~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nill~~~~~~kl~DFg 357 (487)
+..++||||+++++|.+++.. ....+++..+..++.|++.+|.|+ |++|++||||+|+||+++.++.+||+|||
T Consensus 65 ~~~~lv~e~~~~~~L~~~~~~---~~~~~~~~~~~~~~~~i~~~l~~l---H~~~~~H~dl~p~nili~~~~~~~l~d~g 138 (250)
T cd05085 65 QPIYIVMELVPGGDFLSFLRK---KKDELKTKQLVKFALDAAAGMAYL---ESKNCIHRDLAARNCLVGENNVLKISDFG 138 (250)
T ss_pred CccEEEEECCCCCcHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHH---HhCCeeecccChheEEEcCCCeEEECCCc
Confidence 999999999999999998864 234578999999999999999999 78899999999999999999999999999
Q ss_pred CccccCCCCceeeEeeecccccccCCcccCCCCCCchhHHHHHHHHHHHHHh-CCCCccccCCCCccccHHHHHHHHhcC
Q 011360 358 LAMAIPDGYTRVLISYVLGTMAYIAPEYFQQPELSEKCDIFSFGMLLISLVR-GVPSFVFHQNGEEICSPEWLRKVMNSK 436 (487)
Q Consensus 358 ~s~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DvwslG~~l~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~ 436 (487)
++.......... .....+++.|+|||++.+..++.++||||||+++|++++ |..||..... ....... ...
T Consensus 139 ~~~~~~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~ll~~~~~~g~~p~~~~~~------~~~~~~~-~~~ 210 (250)
T cd05085 139 MSRQEDDGIYSS-SGLKQIPIKWTAPEALNYGRYSSESDVWSYGILLWETFSLGVCPYPGMTN------QQAREQV-EKG 210 (250)
T ss_pred cceecccccccc-CCCCCCcccccCHHHhccCCCCchhHHHHHHHHHHHHhcCCCCCCCCCCH------HHHHHHH-HcC
Confidence 987544332211 112234678999999998889999999999999999998 8999943321 1112222 111
Q ss_pred CCCCccCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCChHHHHHHHh
Q 011360 437 NPSRAIDPRLPGNGYEKKMLHVLKIAYICTLHDPEERPNSQYVRCRLS 484 (487)
Q Consensus 437 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~~il~~L~ 484 (487)
.. ..... ..+.++.+++.+||+.+|++|||+.++.+.|.
T Consensus 211 ~~-~~~~~--------~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~ 249 (250)
T cd05085 211 YR-MSCPQ--------KCPDDVYKVMQRCWDYKPENRPKFSELQKELA 249 (250)
T ss_pred CC-CCCCC--------CCCHHHHHHHHHHcccCcccCCCHHHHHHHhc
Confidence 11 11111 12356899999999999999999999999875
No 213
>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=100.00 E-value=5.4e-38 Score=314.21 Aligned_cols=263 Identities=24% Similarity=0.322 Sum_probs=194.2
Q ss_pred ccccccccccccccceeEEEEEecCCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCCCCcccc
Q 011360 191 EDCFASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQIRHRNILPL 270 (487)
Q Consensus 191 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l 270 (487)
.++|.+.+.||.|+||.||++. +..+++.||||++... .........+.+|+.+++.++||||+++
T Consensus 23 ~~~y~~~~~lg~G~~g~V~~~~-~~~~~~~vaiK~~~~~-------------~~~~~~~~~~~~E~~~l~~l~h~~ii~~ 88 (364)
T cd07875 23 LKRYQNLKPIGSGAQGIVCAAY-DAILERNVAIKKLSRP-------------FQNQTHAKRAYRELVLMKCVNHKNIIGL 88 (364)
T ss_pred hcceeEEEEeecCCCeEEEEEE-ECCCCcEEEEEEeCcc-------------ccCchhHHHHHHHHHHHHhcCCCCcccc
Confidence 3469999999999999999996 4567889999987321 1122334566789999999999999999
Q ss_pred ceEEecC------CeeEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEE
Q 011360 271 LAHMVRP------DCHLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVL 344 (487)
Q Consensus 271 ~~~~~~~------~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nil 344 (487)
++++... ...|+||||+++ +|.+++. ..+++..+..++.|++.||.|| |++||+||||||+||+
T Consensus 89 ~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~------~~~~~~~~~~~~~qi~~aL~~L---H~~~ivH~Dlkp~NIl 158 (364)
T cd07875 89 LNVFTPQKSLEEFQDVYIVMELMDA-NLCQVIQ------MELDHERMSYLLYQMLCGIKHL---HSAGIIHRDLKPSNIV 158 (364)
T ss_pred ceeecccccccccCeEEEEEeCCCC-CHHHHHH------hcCCHHHHHHHHHHHHHHHHHH---hhCCeecCCCCHHHEE
Confidence 9987643 357999999954 7777764 2478888999999999999999 7889999999999999
Q ss_pred eCCCCCEEEeccCCccccCCCCceeeEeeecccccccCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCccccCCCCcc-
Q 011360 345 LNDDMEACISDLGLAMAIPDGYTRVLISYVLGTMAYIAPEYFQQPELSEKCDIFSFGMLLISLVRGVPSFVFHQNGEEI- 423 (487)
Q Consensus 345 l~~~~~~kl~DFg~s~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DvwslG~~l~elltg~~pf~~~~~~~~~- 423 (487)
++.++.+||+|||+++....... .....+|+.|+|||++.+..++.++|||||||++|+|++|..||...+.....
T Consensus 159 l~~~~~~kL~DfG~a~~~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~ 235 (364)
T cd07875 159 VKSDCTLKILDFGLARTAGTSFM---MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWN 235 (364)
T ss_pred ECCCCcEEEEeCCCccccCCCCc---ccCCcccCCcCCHHHHhCCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHH
Confidence 99999999999999976543321 13356899999999999999999999999999999999999999543321000
Q ss_pred --------ccHHHH-------HHHHhcCCCCC-c--cCCCC-------CCCCcHHHHHHHHHHHhhccCCCCCCCCChHH
Q 011360 424 --------CSPEWL-------RKVMNSKNPSR-A--IDPRL-------PGNGYEKKMLHVLKIAYICTLHDPEERPNSQY 478 (487)
Q Consensus 424 --------~~~~~~-------~~~~~~~~~~~-~--~~~~~-------~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~~ 478 (487)
..+++. ..... ..+.. . ..... ...........+.+++.+||+.||++|||+.+
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~R~t~~e 314 (364)
T cd07875 236 KVIEQLGTPCPEFMKKLQPTVRTYVE-NRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDE 314 (364)
T ss_pred HHHHhcCCCCHHHHHhhhHHHHHHHh-hCCCcCCCChHhhCccccccccccccccccHHHHHHHHHhcCcCcccCCCHHH
Confidence 000110 00000 00000 0 00000 00111112356889999999999999999999
Q ss_pred HHH
Q 011360 479 VRC 481 (487)
Q Consensus 479 il~ 481 (487)
+++
T Consensus 315 ~L~ 317 (364)
T cd07875 315 ALQ 317 (364)
T ss_pred Hhc
Confidence 976
No 214
>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt
Probab=100.00 E-value=1.2e-37 Score=299.23 Aligned_cols=241 Identities=22% Similarity=0.317 Sum_probs=184.1
Q ss_pred ccccccceeEEEEEecC-----------------------CCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHH
Q 011360 199 KIGSGGCGEVYKAELPG-----------------------SNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSE 255 (487)
Q Consensus 199 ~lg~G~~g~v~~~~~~~-----------------------~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E 255 (487)
.||+|+||.||+|.+.. .....|++|.+.. ........+.+|
T Consensus 2 ~lG~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~---------------~~~~~~~~~~~~ 66 (274)
T cd05076 2 HLGQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDP---------------SHRDIALAFFET 66 (274)
T ss_pred CcCcccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecCh---------------HHHHHHHHHHHH
Confidence 69999999999997521 1123578887621 112234567788
Q ss_pred HHHhccCCCCCccccceEEecCCeeEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeee
Q 011360 256 IITASQIRHRNILPLLAHMVRPDCHLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIH 335 (487)
Q Consensus 256 ~~~l~~l~hpnIv~l~~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH 335 (487)
+.+++.++||||+++++++......++||||+++|+|..++.. ....+++..+..++.|++.||+|| |++||+|
T Consensus 67 ~~~~~~l~h~niv~~~~~~~~~~~~~lv~ey~~~g~L~~~l~~---~~~~~~~~~~~~i~~qi~~~l~~l---H~~~iiH 140 (274)
T cd05076 67 ASLMSQVSHIHLAFVHGVCVRGSENIMVEEFVEHGPLDVCLRK---EKGRVPVAWKITVAQQLASALSYL---EDKNLVH 140 (274)
T ss_pred HHHHhcCCCCCeeeEEEEEEeCCceEEEEecCCCCcHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHH---HcCCccC
Confidence 9999999999999999999999999999999999999988863 245688999999999999999999 7789999
Q ss_pred cCCCCCCEEeCCCC-------CEEEeccCCccccCCCCceeeEeeecccccccCCcccCC-CCCCchhHHHHHHHHHHHH
Q 011360 336 GDIKPRNVLLNDDM-------EACISDLGLAMAIPDGYTRVLISYVLGTMAYIAPEYFQQ-PELSEKCDIFSFGMLLISL 407 (487)
Q Consensus 336 ~Dlkp~Nill~~~~-------~~kl~DFg~s~~~~~~~~~~~~~~~~gt~~y~aPE~l~~-~~~~~~~DvwslG~~l~el 407 (487)
|||||+||+++.++ .+|++|||.+...... ....+++.|+|||.+.+ ..++.++||||||+++||+
T Consensus 141 ~dlkp~Nill~~~~~~~~~~~~~kl~d~g~~~~~~~~------~~~~~~~~~~aPe~~~~~~~~~~~~Dv~slG~~l~el 214 (274)
T cd05076 141 GNVCAKNILLARLGLAEGTSPFIKLSDPGVSFTALSR------EERVERIPWIAPECVPGGNSLSTAADKWSFGTTLLEI 214 (274)
T ss_pred CCCCcccEEEeccCcccCccceeeecCCccccccccc------cccccCCcccCchhhcCCCCCCcHHHHHHHHHHHHHH
Confidence 99999999997644 3799999987643222 12346788999998875 5689999999999999999
Q ss_pred H-hCCCCccccCCCCccccHHHHHHHHhcCCCCCccCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCChHHHHHHHh
Q 011360 408 V-RGVPSFVFHQNGEEICSPEWLRKVMNSKNPSRAIDPRLPGNGYEKKMLHVLKIAYICTLHDPEERPNSQYVRCRLS 484 (487)
Q Consensus 408 l-tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~~il~~L~ 484 (487)
+ +|..||...... + ......... .++.. ....+.+++.+||+.+|++|||+.+|++.|.
T Consensus 215 ~~~g~~p~~~~~~~------~-~~~~~~~~~-------~~~~~----~~~~~~~li~~cl~~~p~~Rps~~~il~~L~ 274 (274)
T cd05076 215 CFDGEVPLKERTPS------E-KERFYEKKH-------RLPEP----SCKELATLISQCLTYEPTQRPSFRTILRDLT 274 (274)
T ss_pred HhCCCCCccccChH------H-HHHHHHhcc-------CCCCC----CChHHHHHHHHHcccChhhCcCHHHHHHhhC
Confidence 5 689998543221 1 111111111 01111 1135889999999999999999999998873
No 215
>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=100.00 E-value=7.6e-38 Score=299.34 Aligned_cols=253 Identities=26% Similarity=0.383 Sum_probs=196.8
Q ss_pred cccccccccccccceeEEEEEecCCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCCCCccccc
Q 011360 192 DCFASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQIRHRNILPLL 271 (487)
Q Consensus 192 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~ 271 (487)
++|.+.+.||.|+||.||+|.. ..+++.||+|.+... .......+.+|+.+++.++||||++++
T Consensus 9 ~~~~~~~~lg~g~~~~v~~~~~-~~~~~~~~ik~~~~~---------------~~~~~~~~~~e~~~~~~l~h~~ii~~~ 72 (267)
T cd06645 9 EDFELIQRIGSGTYGDVYKARN-VNTGELAAIKVIKLE---------------PGEDFAVVQQEIIMMKDCKHSNIVAYF 72 (267)
T ss_pred HHHHHHHHhCCCCCeEEEEEEE-cCCCcEEEEEEEecC---------------chhHHHHHHHHHHHHHhCCCCCeeeEE
Confidence 4689999999999999999974 457889999987431 112234567899999999999999999
Q ss_pred eEEecCCeeEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCCE
Q 011360 272 AHMVRPDCHLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVLLNDDMEA 351 (487)
Q Consensus 272 ~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nill~~~~~~ 351 (487)
+.+...+..|++|||+++++|.+++.. ...+++..+..++.|++.||.|| |+.|++|+||||+||+++.++.+
T Consensus 73 ~~~~~~~~~~lv~e~~~~~~L~~~~~~----~~~~~~~~~~~~~~~i~~~l~~l---H~~~i~H~dlkp~nili~~~~~~ 145 (267)
T cd06645 73 GSYLRRDKLWICMEFCGGGSLQDIYHV----TGPLSESQIAYVSRETLQGLYYL---HSKGKMHRDIKGANILLTDNGHV 145 (267)
T ss_pred EEEEeCCEEEEEEeccCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHH---HHCCeecCCCCHHHEEECCCCCE
Confidence 999999999999999999999999864 45689999999999999999999 67789999999999999999999
Q ss_pred EEeccCCccccCCCCceeeEeeecccccccCCcccC---CCCCCchhHHHHHHHHHHHHHhCCCCccccCCCCccccHHH
Q 011360 352 CISDLGLAMAIPDGYTRVLISYVLGTMAYIAPEYFQ---QPELSEKCDIFSFGMLLISLVRGVPSFVFHQNGEEICSPEW 428 (487)
Q Consensus 352 kl~DFg~s~~~~~~~~~~~~~~~~gt~~y~aPE~l~---~~~~~~~~DvwslG~~l~elltg~~pf~~~~~~~~~~~~~~ 428 (487)
+|+|||++......... .....|++.|+|||++. ...++.++|+|||||++|+|++|..||...... ..
T Consensus 146 ~l~dfg~~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~~~~DvwSlG~il~~l~~~~~p~~~~~~~------~~ 217 (267)
T cd06645 146 KLADFGVSAQITATIAK--RKSFIGTPYWMAPEVAAVERKGGYNQLCDIWAVGITAIELAELQPPMFDLHPM------RA 217 (267)
T ss_pred EECcceeeeEccCcccc--cccccCcccccChhhhccccCCCCCchhhhHHHHHHHHHHhcCCCCcccccch------hh
Confidence 99999998765432211 13446899999999874 456889999999999999999999998433211 11
Q ss_pred HHHHHhcCCCCCccCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCChHHHHH
Q 011360 429 LRKVMNSKNPSRAIDPRLPGNGYEKKMLHVLKIAYICTLHDPEERPNSQYVRC 481 (487)
Q Consensus 429 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~~il~ 481 (487)
............ .... ....+..+.+++.+||+.+|++|||+.+|++
T Consensus 218 ~~~~~~~~~~~~----~~~~--~~~~~~~~~~li~~~l~~~P~~R~~~~~ll~ 264 (267)
T cd06645 218 LFLMTKSNFQPP----KLKD--KMKWSNSFHHFVKMALTKNPKKRPTAEKLLQ 264 (267)
T ss_pred HHhhhccCCCCC----cccc--cCCCCHHHHHHHHHHccCCchhCcCHHHHhc
Confidence 111111111111 1110 0112345889999999999999999999875
No 216
>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=7.1e-38 Score=304.29 Aligned_cols=250 Identities=27% Similarity=0.420 Sum_probs=199.8
Q ss_pred cccccccccccccceeEEEEEecCCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCCCCccccc
Q 011360 192 DCFASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQIRHRNILPLL 271 (487)
Q Consensus 192 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~ 271 (487)
..|.+.+.||.|++|.||+|. +..+++.|++|.+... .......+.+|+.+++.++||||++++
T Consensus 19 ~~y~~~~~lg~g~~g~vy~~~-~~~~~~~v~iK~~~~~---------------~~~~~~~~~~e~~~l~~l~h~~iv~~~ 82 (296)
T cd06655 19 KKYTRYEKIGQGASGTVFTAI-DVATGQEVAIKQINLQ---------------KQPKKELIINEILVMKELKNPNIVNFL 82 (296)
T ss_pred ceEEEEEEEecCCCeEEEEEE-EcCCCcEEEEEEEecc---------------cCchHHHHHHHHHHHHhcCCCceeeee
Confidence 469999999999999999996 4468899999987321 112234677899999999999999999
Q ss_pred eEEecCCeeEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCCE
Q 011360 272 AHMVRPDCHLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVLLNDDMEA 351 (487)
Q Consensus 272 ~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nill~~~~~~ 351 (487)
+++...+..|+||||+++++|..++.. ..+++..+..++.|++.||.|| |+.|++||||+|+||+++.++.+
T Consensus 83 ~~~~~~~~~~lv~e~~~~~~L~~~~~~-----~~l~~~~~~~i~~~l~~al~~L---H~~~i~H~dL~p~Nili~~~~~~ 154 (296)
T cd06655 83 DSFLVGDELFVVMEYLAGGSLTDVVTE-----TCMDEAQIAAVCRECLQALEFL---HANQVIHRDIKSDNVLLGMDGSV 154 (296)
T ss_pred eeEecCceEEEEEEecCCCcHHHHHHh-----cCCCHHHHHHHHHHHHHHHHHH---HHCCcccCCCCHHHEEECCCCCE
Confidence 999999999999999999999998863 4588999999999999999999 77889999999999999999999
Q ss_pred EEeccCCccccCCCCceeeEeeecccccccCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCccccCCCCccccHHHHHH
Q 011360 352 CISDLGLAMAIPDGYTRVLISYVLGTMAYIAPEYFQQPELSEKCDIFSFGMLLISLVRGVPSFVFHQNGEEICSPEWLRK 431 (487)
Q Consensus 352 kl~DFg~s~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DvwslG~~l~elltg~~pf~~~~~~~~~~~~~~~~~ 431 (487)
+|+|||++......... .....++..|+|||.+.+..++.++||||||+++|+|++|..||..... ......
T Consensus 155 kl~dfg~~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~~lltg~~pf~~~~~------~~~~~~ 226 (296)
T cd06655 155 KLTDFGFCAQITPEQSK--RSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENP------LRALYL 226 (296)
T ss_pred EEccCccchhccccccc--CCCcCCCccccCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH------HHHHHH
Confidence 99999998765433221 1234588899999999988899999999999999999999999944322 111222
Q ss_pred HHhcCCCCCccCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCChHHHHH
Q 011360 432 VMNSKNPSRAIDPRLPGNGYEKKMLHVLKIAYICTLHDPEERPNSQYVRC 481 (487)
Q Consensus 432 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~~il~ 481 (487)
......+..... ...+..+.+++.+||..+|++|||+.+|++
T Consensus 227 ~~~~~~~~~~~~--------~~~~~~~~~li~~~l~~dp~~Rpt~~~il~ 268 (296)
T cd06655 227 IATNGTPELQNP--------EKLSPIFRDFLNRCLEMDVEKRGSAKELLQ 268 (296)
T ss_pred HHhcCCcccCCc--------ccCCHHHHHHHHHHhhcChhhCCCHHHHhh
Confidence 222221111111 122346889999999999999999999875
No 217
>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa
Probab=100.00 E-value=1.5e-37 Score=295.40 Aligned_cols=253 Identities=22% Similarity=0.354 Sum_probs=204.1
Q ss_pred ccccccccccccceeEEEEEecCCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCCCCccccce
Q 011360 193 CFASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQIRHRNILPLLA 272 (487)
Q Consensus 193 ~~~~~~~lg~G~~g~v~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~ 272 (487)
+|+..+.||.|+||.||.++. ..++..+++|.+... .........+.+|+.++++++||||+++++
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~-~~~~~~~~~k~~~~~-------------~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~ 66 (256)
T cd08221 1 HYIPIRVLGKGAFGEATLYRR-TEDDSLVVWKEVNLT-------------RLSEKERRDALNEIVILSLLQHPNIIAYYN 66 (256)
T ss_pred CceEeeEecccCCceEEEEEE-cCCCcEEEEEEEeec-------------ccchhHHHHHHHHHHHHHhCCCCCeeEEEe
Confidence 378899999999999999974 467889999987431 122334556789999999999999999999
Q ss_pred EEecCCeeEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCCEE
Q 011360 273 HMVRPDCHLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVLLNDDMEAC 352 (487)
Q Consensus 273 ~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nill~~~~~~k 352 (487)
++.+.+..+++|||+++++|.+++.. .....+++..+..++.|++.||.|| |+.|++|+||+|+||+++.++.+|
T Consensus 67 ~~~~~~~~~~~~e~~~~~~L~~~~~~--~~~~~~~~~~~~~~~~~l~~~l~~l---h~~~i~h~dl~p~ni~~~~~~~~k 141 (256)
T cd08221 67 HFMDDNTLLIEMEYANGGTLYDKIVR--QKGQLFEEEMVLWYLFQIVSAVSYI---HKAGILHRDIKTLNIFLTKAGLIK 141 (256)
T ss_pred EEecCCeEEEEEEecCCCcHHHHHHh--ccccCCCHHHHHHHHHHHHHHHHHH---HhCCccccCCChHhEEEeCCCCEE
Confidence 99999999999999999999999875 2245688999999999999999999 778899999999999999999999
Q ss_pred EeccCCccccCCCCceeeEeeecccccccCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCccccCCCCccccHHHHHHH
Q 011360 353 ISDLGLAMAIPDGYTRVLISYVLGTMAYIAPEYFQQPELSEKCDIFSFGMLLISLVRGVPSFVFHQNGEEICSPEWLRKV 432 (487)
Q Consensus 353 l~DFg~s~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DvwslG~~l~elltg~~pf~~~~~~~~~~~~~~~~~~ 432 (487)
|+|||++........ ......+++.|+|||.+.+..++.++||||||+++|+|++|..||.... ..+.....
T Consensus 142 l~d~~~~~~~~~~~~--~~~~~~~~~~y~ape~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~------~~~~~~~~ 213 (256)
T cd08221 142 LGDFGISKILGSEYS--MAETVVGTPYYMSPELCQGVKYNFKSDIWALGCVLYELLTLKRTFDATN------PLNLVVKI 213 (256)
T ss_pred ECcCcceEEcccccc--cccccCCCccccCHhhcCCCCCCCcchhHHHHHHHHHHHHCCCCCCCCC------HHHHHHHH
Confidence 999999876644332 1234568999999999988888999999999999999999999994322 22333333
Q ss_pred HhcCCCCCccCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCChHHHHHH
Q 011360 433 MNSKNPSRAIDPRLPGNGYEKKMLHVLKIAYICTLHDPEERPNSQYVRCR 482 (487)
Q Consensus 433 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~~il~~ 482 (487)
...... .. . ...+.++.+++.+||+.+|++|||++++++.
T Consensus 214 ~~~~~~-~~-~--------~~~~~~~~~~i~~~l~~~p~~R~s~~~ll~~ 253 (256)
T cd08221 214 VQGNYT-PV-V--------SVYSSELISLVHSLLQQDPEKRPTADEVLDQ 253 (256)
T ss_pred HcCCCC-CC-c--------cccCHHHHHHHHHHcccCcccCCCHHHHhhC
Confidence 322211 11 1 1223568899999999999999999999875
No 218
>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.
Probab=100.00 E-value=1.3e-37 Score=295.75 Aligned_cols=252 Identities=22% Similarity=0.351 Sum_probs=199.4
Q ss_pred ccccccccccccceeEEEEEecCCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCCCCccccce
Q 011360 193 CFASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQIRHRNILPLLA 272 (487)
Q Consensus 193 ~~~~~~~lg~G~~g~v~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~ 272 (487)
.|.+.+.||.|++|.||++.. ..+++.||+|++.. ........+.+.+|+.+++.++|||++++++
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~-~~~~~~~~~k~~~~-------------~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~ 66 (257)
T cd08223 1 AYCFVRVVGKGSYGEVSLVRH-RTDGKQYVIKKLNL-------------RNASRRERKAAEQEAQLLSQLKHPNIVAYRE 66 (257)
T ss_pred CceEEEEecCCCCeEEEEEEE-cCCCcEEEEEEEeh-------------hhcCHHHHHHHHHHHHHHHhCCCCCeeeeee
Confidence 388899999999999999975 45788999998732 1112234456788999999999999999998
Q ss_pred EEec-CCeeEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCCE
Q 011360 273 HMVR-PDCHLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVLLNDDMEA 351 (487)
Q Consensus 273 ~~~~-~~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nill~~~~~~ 351 (487)
.+.. ...+|++|||+++++|.+++.. .....+++.++..++.|++.|+.+| |+.|++||||+|+||+++.++.+
T Consensus 67 ~~~~~~~~~~lv~e~~~~~~l~~~l~~--~~~~~l~~~~~~~~~~~l~~~l~~l---H~~~i~H~di~p~nil~~~~~~~ 141 (257)
T cd08223 67 SWEGEDGLLYIVMGFCEGGDLYHKLKE--QKGKLLPENQVVEWFVQIAMALQYL---HEKHILHRDLKTQNVFLTRTNII 141 (257)
T ss_pred eecCCCCEEEEEecccCCCcHHHHHHH--hcCCCCCHHHHHHHHHHHHHHHHHH---HhCCeeccCCCchhEEEecCCcE
Confidence 8764 4467999999999999999875 2345689999999999999999999 77889999999999999999999
Q ss_pred EEeccCCccccCCCCceeeEeeecccccccCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCccccCCCCccccHHHHHH
Q 011360 352 CISDLGLAMAIPDGYTRVLISYVLGTMAYIAPEYFQQPELSEKCDIFSFGMLLISLVRGVPSFVFHQNGEEICSPEWLRK 431 (487)
Q Consensus 352 kl~DFg~s~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DvwslG~~l~elltg~~pf~~~~~~~~~~~~~~~~~ 431 (487)
+|+|||++........ ......+++.|+|||++.+..++.++||||||+++|+|++|..||.... .......
T Consensus 142 ~l~df~~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~------~~~~~~~ 213 (257)
T cd08223 142 KVGDLGIARVLENQCD--MASTLIGTPYYMSPELFSNKPYNYKSDVWALGCCVYEMATLKHAFNAKD------MNSLVYR 213 (257)
T ss_pred EEecccceEEecccCC--ccccccCCcCccChhHhcCCCCCchhhhHHHHHHHHHHHcCCCCCCCCC------HHHHHHH
Confidence 9999999876543221 1134568899999999999899999999999999999999999984322 1222222
Q ss_pred HHhcCCCCCccCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCChHHHHH
Q 011360 432 VMNSKNPSRAIDPRLPGNGYEKKMLHVLKIAYICTLHDPEERPNSQYVRC 481 (487)
Q Consensus 432 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~~il~ 481 (487)
......+ ..+ ......+.+++.+||+.+|++|||+.+++.
T Consensus 214 ~~~~~~~------~~~----~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~ 253 (257)
T cd08223 214 IIEGKLP------PMP----KDYSPELGELIATMLSKRPEKRPSVKSILR 253 (257)
T ss_pred HHhcCCC------CCc----cccCHHHHHHHHHHhccCcccCCCHHHHhc
Confidence 2222211 111 123456889999999999999999999875
No 219
>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with
Probab=100.00 E-value=8.5e-38 Score=302.13 Aligned_cols=254 Identities=24% Similarity=0.334 Sum_probs=196.7
Q ss_pred cccccccccccceeEEEEEecCCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCCCCccccceE
Q 011360 194 FASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQIRHRNILPLLAH 273 (487)
Q Consensus 194 ~~~~~~lg~G~~g~v~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~ 273 (487)
|...+.||.|+||+||++.+. .+++.||+|.+... ..........+.+|+.+++.++|+||+.+++.
T Consensus 2 ~~~~~~lg~G~~g~vy~~~~~-~~~~~~aiK~~~~~------------~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~ 68 (285)
T cd05632 2 FRQYRVLGKGGFGEVCACQVR-ATGKMYACKRLEKK------------RIKKRKGESMALNEKQILEKVNSQFVVNLAYA 68 (285)
T ss_pred ceEEEEEecCCCeEEEEEEEC-CCCcEEEEEEeehh------------hhhhhhHHHHHHHHHHHHHHcCCcCceeEEEE
Confidence 667789999999999999754 57889999987320 11112234456789999999999999999999
Q ss_pred EecCCeeEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCCEEE
Q 011360 274 MVRPDCHLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVLLNDDMEACI 353 (487)
Q Consensus 274 ~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nill~~~~~~kl 353 (487)
+..++..+++|||+++++|.+++.. .....+++..+..++.|++.||.|| |+.||+||||||+||+++.++.++|
T Consensus 69 ~~~~~~~~lv~e~~~~~~L~~~~~~--~~~~~~~~~~~~~~~~ql~~~l~~l---H~~~iiH~dikp~Nili~~~~~~kl 143 (285)
T cd05632 69 YETKDALCLVLTIMNGGDLKFHIYN--MGNPGFEEERALFYAAEILCGLEDL---HRENTVYRDLKPENILLDDYGHIRI 143 (285)
T ss_pred EecCCEEEEEEEeccCccHHHHHHH--hcCCCCCHHHHHHHHHHHHHHHHHH---HhCCeeecCCCHHHEEECCCCCEEE
Confidence 9999999999999999999988864 2344689999999999999999999 7788999999999999999999999
Q ss_pred eccCCccccCCCCceeeEeeecccccccCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCccccCCCCccccHHHHHHHH
Q 011360 354 SDLGLAMAIPDGYTRVLISYVLGTMAYIAPEYFQQPELSEKCDIFSFGMLLISLVRGVPSFVFHQNGEEICSPEWLRKVM 433 (487)
Q Consensus 354 ~DFg~s~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DvwslG~~l~elltg~~pf~~~~~~~~~~~~~~~~~~~ 433 (487)
+|||++......... ....|+..|+|||.+.+..++.++|+||||+++|+|++|..||....... ..+......
T Consensus 144 ~Dfg~~~~~~~~~~~---~~~~g~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~P~~~~~~~~---~~~~~~~~~ 217 (285)
T cd05632 144 SDLGLAVKIPEGESI---RGRVGTVGYMAPEVLNNQRYTLSPDYWGLGCLIYEMIEGQSPFRGRKEKV---KREEVDRRV 217 (285)
T ss_pred ecCCcceecCCCCcc---cCCCCCcCccChHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCCHHH---HHHHHHHhh
Confidence 999998765432211 23468999999999998899999999999999999999999995432210 011111111
Q ss_pred hcCCCCCccCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCC-----hHHHHH
Q 011360 434 NSKNPSRAIDPRLPGNGYEKKMLHVLKIAYICTLHDPEERPN-----SQYVRC 481 (487)
Q Consensus 434 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs-----~~~il~ 481 (487)
... .....+. .+..+.+++..||+.||++||| +.+++.
T Consensus 218 ~~~--~~~~~~~--------~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~ 260 (285)
T cd05632 218 LET--EEVYSAK--------FSEEAKSICKMLLTKDPKQRLGCQEEGAGEVKR 260 (285)
T ss_pred hcc--ccccCcc--------CCHHHHHHHHHHccCCHhHcCCCcccChHHHHc
Confidence 111 1111111 2345789999999999999999 556554
No 220
>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou
Probab=100.00 E-value=3.4e-38 Score=305.19 Aligned_cols=260 Identities=24% Similarity=0.342 Sum_probs=188.9
Q ss_pred ccccccccccccceeEEEEEecCCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhc---cCCCCCccc
Q 011360 193 CFASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITAS---QIRHRNILP 269 (487)
Q Consensus 193 ~~~~~~~lg~G~~g~v~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~---~l~hpnIv~ 269 (487)
+|.+.+.||.|+||.||+|.. ..+++.||+|.+..... .......+.+|+.++. +++||||++
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~-~~~~~~~aiK~~~~~~~-------------~~~~~~~~~~e~~~l~~l~~~~h~ni~~ 66 (288)
T cd07863 1 QYEPVAEIGVGAYGTVYKARD-PHSGHFVALKSVRVQTN-------------EDGLPLSTVREVALLKRLEAFDHPNIVR 66 (288)
T ss_pred CceEeeEEeecCCeEEEEEEE-CCCCcEEEEEEeccCcC-------------CCCCchHHHHHHHHHHHhhhcCCCCeee
Confidence 378889999999999999975 46789999998743110 0011122334555444 457999999
Q ss_pred cceEEec-----CCeeEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEE
Q 011360 270 LLAHMVR-----PDCHLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVL 344 (487)
Q Consensus 270 l~~~~~~-----~~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nil 344 (487)
+++++.. ....+++|||+. ++|.+++.. .....+++..+..++.|++.||.|| |+.|++||||||+||+
T Consensus 67 ~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~--~~~~~~~~~~~~~~~~qi~~al~~l---H~~~ivH~dikp~Nil 140 (288)
T cd07863 67 LMDVCATSRTDRETKVTLVFEHVD-QDLRTYLDK--VPPPGLPAETIKDLMRQFLRGLDFL---HANCIVHRDLKPENIL 140 (288)
T ss_pred eeeeeccccCCCCceEEEEEcccc-cCHHHHHHh--cCCCCCCHHHHHHHHHHHHHHHHHH---HhCCeecCCCCHHHEE
Confidence 9998764 345799999996 489888865 2234589999999999999999999 7788999999999999
Q ss_pred eCCCCCEEEeccCCccccCCCCceeeEeeecccccccCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCccccCCCCccc
Q 011360 345 LNDDMEACISDLGLAMAIPDGYTRVLISYVLGTMAYIAPEYFQQPELSEKCDIFSFGMLLISLVRGVPSFVFHQNGEEIC 424 (487)
Q Consensus 345 l~~~~~~kl~DFg~s~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DvwslG~~l~elltg~~pf~~~~~~~~~~ 424 (487)
++.++.+||+|||++......... ....||+.|+|||++.+..++.++|||||||++|+|++|.+||......
T Consensus 141 i~~~~~~kl~dfg~~~~~~~~~~~---~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~~f~~~~~~---- 213 (288)
T cd07863 141 VTSGGQVKLADFGLARIYSCQMAL---TPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEA---- 213 (288)
T ss_pred ECCCCCEEECccCccccccCcccC---CCccccccccCchHhhCCCCCCcchhhhHHHHHHHHHhCCcCcCCCCHH----
Confidence 999999999999999765433221 2345789999999999889999999999999999999999999543221
Q ss_pred cHHHHHHHHhc---CC----------CCCccCCCCC---CCCcHHHHHHHHHHHhhccCCCCCCCCChHHHHH
Q 011360 425 SPEWLRKVMNS---KN----------PSRAIDPRLP---GNGYEKKMLHVLKIAYICTLHDPEERPNSQYVRC 481 (487)
Q Consensus 425 ~~~~~~~~~~~---~~----------~~~~~~~~~~---~~~~~~~~~~l~~li~~cl~~~P~~RPs~~~il~ 481 (487)
......... .. +.....+..+ ..........+.+++.+||+.||++|||+.+++.
T Consensus 214 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~~~l~ 284 (288)
T cd07863 214 --DQLGKIFDLIGLPPEDDWPRDVTLPRGAFSPRGPRPVQSVVPEIEESGAQLLLEMLTFNPHKRISAFRALQ 284 (288)
T ss_pred --HHHHHHHHHhCCCChhhCcccccccccccCCCCCCchHHhCcCcCHHHHHHHHHHhccCcccCCCHHHHhc
Confidence 111111110 00 0000000000 0011223456889999999999999999999874
No 221
>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi
Probab=100.00 E-value=1.1e-37 Score=296.47 Aligned_cols=251 Identities=24% Similarity=0.333 Sum_probs=194.8
Q ss_pred cccccccceeEEEEEecCCC--CceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCCCCccccceEEe
Q 011360 198 EKIGSGGCGEVYKAELPGSN--GKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQIRHRNILPLLAHMV 275 (487)
Q Consensus 198 ~~lg~G~~g~v~~~~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~ 275 (487)
+.||+|+||.||+|.+...+ +..+|+|.+... ........+..|+.+++.+.||||+++++++.
T Consensus 1 ~~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~--------------~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~ 66 (257)
T cd05060 1 KELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQE--------------HIAAGKKEFLREASVMAQLDHPCIVRLIGVCK 66 (257)
T ss_pred CccCccCceeEEEeEeeccCCCcceEEEEecccc--------------cchHHHHHHHHHHHHHHhcCCCCeeeEEEEEc
Confidence 46999999999999764433 378999987321 11134567788999999999999999999775
Q ss_pred cCCeeEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCCEEEec
Q 011360 276 RPDCHLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVLLNDDMEACISD 355 (487)
Q Consensus 276 ~~~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nill~~~~~~kl~D 355 (487)
.+..++||||+++|+|.+++.. ...+++..+..++.|++.||.|| |+.|++|+||||+||+++.++.+||+|
T Consensus 67 -~~~~~~v~e~~~~~~L~~~l~~----~~~~~~~~~~~~~~qi~~~l~~l---h~~~i~H~di~p~nili~~~~~~kl~d 138 (257)
T cd05060 67 -GEPLMLVMELAPLGPLLKYLKK----RREIPVSDLKELAHQVAMGMAYL---ESKHFVHRDLAARNVLLVNRHQAKISD 138 (257)
T ss_pred -CCceEEEEEeCCCCcHHHHHHh----CCCCCHHHHHHHHHHHHHHHHHH---hhcCeeccCcccceEEEcCCCcEEecc
Confidence 4567999999999999999975 34689999999999999999999 777899999999999999999999999
Q ss_pred cCCccccCCCCceee-EeeecccccccCCcccCCCCCCchhHHHHHHHHHHHHHh-CCCCccccCCCCccccHHHHHHHH
Q 011360 356 LGLAMAIPDGYTRVL-ISYVLGTMAYIAPEYFQQPELSEKCDIFSFGMLLISLVR-GVPSFVFHQNGEEICSPEWLRKVM 433 (487)
Q Consensus 356 Fg~s~~~~~~~~~~~-~~~~~gt~~y~aPE~l~~~~~~~~~DvwslG~~l~ellt-g~~pf~~~~~~~~~~~~~~~~~~~ 433 (487)
||+++.......... .....++..|+|||.+.+..++.++||||||+++|+|++ |..||..... .+... ..
T Consensus 139 f~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~~~~~g~~p~~~~~~------~~~~~-~~ 211 (257)
T cd05060 139 FGMSRALGAGSDYYRATTAGRWPLKWYAPECINYGKFSSKSDVWSYGVTLWEAFSYGAKPYGEMKG------AEVIA-ML 211 (257)
T ss_pred ccccceeecCCcccccccCccccccccCHHHhcCCCCCccchHHHHHHHHHHHHcCCCCCcccCCH------HHHHH-HH
Confidence 999986644332111 011223568999999998899999999999999999998 8999943321 22222 22
Q ss_pred hcCCCCCccCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCChHHHHHHHhhh
Q 011360 434 NSKNPSRAIDPRLPGNGYEKKMLHVLKIAYICTLHDPEERPNSQYVRCRLSQL 486 (487)
Q Consensus 434 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~~il~~L~~l 486 (487)
....... .+. ..+..+.+++.+||..+|++|||+.++++.|+.+
T Consensus 212 ~~~~~~~-----~~~----~~~~~l~~li~~cl~~~p~~Rp~~~~l~~~l~~~ 255 (257)
T cd05060 212 ESGERLP-----RPE----ECPQEIYSIMLSCWKYRPEDRPTFSELESTFRRD 255 (257)
T ss_pred HcCCcCC-----CCC----CCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHhc
Confidence 2222111 111 1235688999999999999999999999999875
No 222
>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]
Probab=100.00 E-value=9.7e-41 Score=301.12 Aligned_cols=251 Identities=29% Similarity=0.421 Sum_probs=209.7
Q ss_pred ccccccccccccccceeEEEEEecCCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCCCCcccc
Q 011360 191 EDCFASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQIRHRNILPL 270 (487)
Q Consensus 191 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l 270 (487)
++-|.++.+||+|+||.||++.+ +.+|..+|||++.. ...+..+..|+.++.++..|++|++
T Consensus 32 EEVFDi~~KLGEGSYGSV~KAIH-~EsG~v~AIK~VPV-----------------~sDLQEIIKEISIMQQC~S~yVVKY 93 (502)
T KOG0574|consen 32 EEVFDIVGKLGEGSYGSVHKAIH-RESGHVLAIKKVPV-----------------DTDLQEIIKEISIMQQCKSKYVVKY 93 (502)
T ss_pred HHHHHHHHHhcCCcchHHHHHHH-hccCcEEEEEecCc-----------------cchHHHHHHHHHHHHHcCCchhhhh
Confidence 34588999999999999999965 57899999998743 3456788999999999999999999
Q ss_pred ceEEecCCeeEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCC
Q 011360 271 LAHMVRPDCHLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVLLNDDME 350 (487)
Q Consensus 271 ~~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nill~~~~~ 350 (487)
||.+.....++||||||..|+..+.+.. .++++++..+..+++..+.||+|||. ..-+|||||+.|||++.+|.
T Consensus 94 YGSYFK~sDLWIVMEYCGAGSiSDI~R~---R~K~L~E~EIs~iL~~TLKGL~YLH~---~~KIHRDIKAGNILLNT~G~ 167 (502)
T KOG0574|consen 94 YGSYFKHSDLWIVMEYCGAGSISDIMRA---RRKPLSEQEISAVLRDTLKGLQYLHD---LKKIHRDIKAGNILLNTDGI 167 (502)
T ss_pred hhhhccCCceEeehhhcCCCcHHHHHHH---hcCCccHHHHHHHHHHHHhHHHHHHH---HHHHHhhcccccEEEcccch
Confidence 9999999999999999999999999874 46789999999999999999999954 44799999999999999999
Q ss_pred EEEeccCCccccCCCCceeeEeeecccccccCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCccccCCCCccccHHHHH
Q 011360 351 ACISDLGLAMAIPDGYTRVLISYVLGTMAYIAPEYFQQPELSEKCDIFSFGMLLISLVRGVPSFVFHQNGEEICSPEWLR 430 (487)
Q Consensus 351 ~kl~DFg~s~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DvwslG~~l~elltg~~pf~~~~~~~~~~~~~~~~ 430 (487)
+||+|||.+-.+.+..... .+..|||.|||||++..-.|+.++||||||++..||..|++||..--+.+.+
T Consensus 168 AKLADFGVAGQLTDTMAKR--NTVIGTPFWMAPEVI~EIGY~~~ADIWSLGITaIEMAEG~PPYsDIHPMRAI------- 238 (502)
T KOG0574|consen 168 AKLADFGVAGQLTDTMAKR--NTVIGTPFWMAPEVIEEIGYDTKADIWSLGITAIEMAEGRPPYSDIHPMRAI------- 238 (502)
T ss_pred hhhhhccccchhhhhHHhh--CccccCcccccHHHHHHhccchhhhHhhhcchhhhhhcCCCCccccccccee-------
Confidence 9999999998775543322 4678999999999999999999999999999999999999999433222211
Q ss_pred HHHhcCCCCCccCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCChHHHHH
Q 011360 431 KVMNSKNPSRAIDPRLPGNGYEKKMLHVLKIAYICTLHDPEERPNSQYVRC 481 (487)
Q Consensus 431 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~~il~ 481 (487)
++....|... .......+.++.++++.||.++|++|-|+-++++
T Consensus 239 -FMIPT~PPPT------F~KPE~WS~~F~DFi~~CLiK~PE~R~TA~~L~~ 282 (502)
T KOG0574|consen 239 -FMIPTKPPPT------FKKPEEWSSEFNDFIRSCLIKKPEERKTALRLCE 282 (502)
T ss_pred -EeccCCCCCC------CCChHhhhhHHHHHHHHHhcCCHHHHHHHHHHhh
Confidence 1122222211 1234566778999999999999999999998876
No 223
>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin. Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear
Probab=100.00 E-value=8.3e-38 Score=302.20 Aligned_cols=256 Identities=24% Similarity=0.331 Sum_probs=195.8
Q ss_pred ccccccccccccccceeEEEEEecCCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccC-CCCCccc
Q 011360 191 EDCFASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQI-RHRNILP 269 (487)
Q Consensus 191 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpnIv~ 269 (487)
.++|.+.+.||.|+||.||++.. ..++..+|+|.+.. .......+..|+.++..+ +||||++
T Consensus 17 ~~~~~~~~~lg~g~~~~vy~~~~-~~~~~~~~ik~~~~----------------~~~~~~~~~~e~~~l~~l~~h~~i~~ 79 (286)
T cd06638 17 SDTWEIIETIGKGTYGKVFKVLN-KKNGSKAAVKILDP----------------IHDIDEEIEAEYNILKALSDHPNVVK 79 (286)
T ss_pred ccceeeeeeeccCCCcEEEEEEE-CCCCceeEEEeecc----------------ccchHHHHHHHHHHHHHHhcCCCeee
Confidence 45799999999999999999975 45788999997632 111224566788888888 7999999
Q ss_pred cceEEe-----cCCeeEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEE
Q 011360 270 LLAHMV-----RPDCHLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVL 344 (487)
Q Consensus 270 l~~~~~-----~~~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nil 344 (487)
+++++. .++..++||||+++++|.+++.........+++..+..++.|++.||.|| |+.+++||||||+||+
T Consensus 80 ~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~l---H~~~i~H~dlkp~nil 156 (286)
T cd06638 80 FYGMYYKKDVKNGDQLWLVLELCNGGSVTDLVKGFLKRGERMEEPIIAYILHEALMGLQHL---HVNKTIHRDVKGNNIL 156 (286)
T ss_pred eeeeeeecccCCCCeEEEEEeecCCCCHHHHHHHhhccCccccHHHHHHHHHHHHHHHHHH---HhCCccccCCCHHhEE
Confidence 999874 34568999999999999998875434456788999999999999999999 7788999999999999
Q ss_pred eCCCCCEEEeccCCccccCCCCceeeEeeecccccccCCcccCC-----CCCCchhHHHHHHHHHHHHHhCCCCccccCC
Q 011360 345 LNDDMEACISDLGLAMAIPDGYTRVLISYVLGTMAYIAPEYFQQ-----PELSEKCDIFSFGMLLISLVRGVPSFVFHQN 419 (487)
Q Consensus 345 l~~~~~~kl~DFg~s~~~~~~~~~~~~~~~~gt~~y~aPE~l~~-----~~~~~~~DvwslG~~l~elltg~~pf~~~~~ 419 (487)
++.++.++|+|||++......... .....|++.|+|||++.. ..++.++|||||||++|+|++|..||.....
T Consensus 157 i~~~~~~kl~dfg~~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvi~~el~~g~~p~~~~~~ 234 (286)
T cd06638 157 LTTEGGVKLVDFGVSAQLTSTRLR--RNTSVGTPFWMAPEVIACEQQLDSTYDARCDVWSLGITAIELGDGDPPLADLHP 234 (286)
T ss_pred ECCCCCEEEccCCceeecccCCCc--cccccCCCcccChhhhchhhhccccccchhhhhhHHHHHHHHhcCCCCCCCCch
Confidence 999999999999998765432211 123458999999998753 4578999999999999999999999943322
Q ss_pred CCccccHHHHHHHHhcCCCCCccCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCChHHHHHH
Q 011360 420 GEEICSPEWLRKVMNSKNPSRAIDPRLPGNGYEKKMLHVLKIAYICTLHDPEERPNSQYVRCR 482 (487)
Q Consensus 420 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~~il~~ 482 (487)
. ...........+ ....+. .....+.+++.+||+.+|++|||+.+|++.
T Consensus 235 ~------~~~~~~~~~~~~-~~~~~~-------~~~~~~~~li~~~l~~~p~~Rps~~ell~~ 283 (286)
T cd06638 235 M------RALFKIPRNPPP-TLHQPE-------LWSNEFNDFIRKCLTKDYEKRPTVSDLLQH 283 (286)
T ss_pred h------HHHhhccccCCC-cccCCC-------CcCHHHHHHHHHHccCCcccCCCHHHHhhc
Confidence 1 111111111111 111111 123468899999999999999999999864
No 224
>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p
Probab=100.00 E-value=4.7e-38 Score=308.67 Aligned_cols=200 Identities=24% Similarity=0.372 Sum_probs=159.6
Q ss_pred cccccccceeEEEEEec-CCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCCCCccccceEEec
Q 011360 198 EKIGSGGCGEVYKAELP-GSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQIRHRNILPLLAHMVR 276 (487)
Q Consensus 198 ~~lg~G~~g~v~~~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~ 276 (487)
+.||+|+||.||+|... ..++..||+|.+... .....+.+|+.+++.++||||+++++++..
T Consensus 7 ~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~-----------------~~~~~~~~E~~~l~~l~h~niv~~~~~~~~ 69 (317)
T cd07868 7 CKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGT-----------------GISMSACREIALLRELKHPNVISLQKVFLS 69 (317)
T ss_pred cccccCCCeEEEEEEEccCCCCceEEEEEECCC-----------------CCcHHHHHHHHHHHhcCCCCCcceeeeEec
Confidence 58999999999999753 246788999987321 012245679999999999999999998854
Q ss_pred --CCeeEEEEEecCCCCHHHHHhhhhc-----CCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEe----
Q 011360 277 --PDCHLLVYEFMKNGSLQDILDDVSR-----GRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVLL---- 345 (487)
Q Consensus 277 --~~~~~lv~E~~~~gsL~~~l~~~~~-----~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nill---- 345 (487)
....|++|||+ +++|.+++..... ....+++..+..++.|++.||.|| |++||+||||||+|||+
T Consensus 70 ~~~~~~~lv~e~~-~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~L---H~~~ivHrDlkp~Nil~~~~~ 145 (317)
T cd07868 70 HADRKVWLLFDYA-EHDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYL---HANWVLHRDLKPANILVMGEG 145 (317)
T ss_pred CCCcEEEEEEecc-CCCHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHH---HhCCEEcCCCCHHHEEEecCC
Confidence 45688999999 4588888764221 123588899999999999999999 78899999999999999
Q ss_pred CCCCCEEEeccCCccccCCCCce-eeEeeecccccccCCcccCC-CCCCchhHHHHHHHHHHHHHhCCCCccccC
Q 011360 346 NDDMEACISDLGLAMAIPDGYTR-VLISYVLGTMAYIAPEYFQQ-PELSEKCDIFSFGMLLISLVRGVPSFVFHQ 418 (487)
Q Consensus 346 ~~~~~~kl~DFg~s~~~~~~~~~-~~~~~~~gt~~y~aPE~l~~-~~~~~~~DvwslG~~l~elltg~~pf~~~~ 418 (487)
+.++.+||+|||+++........ .......||+.|+|||++.+ ..++.++||||+||++|+|++|.+||....
T Consensus 146 ~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~ 220 (317)
T cd07868 146 PERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQ 220 (317)
T ss_pred CCcCcEEEeecCceeccCCCCccccccCCccccccccCCHHHcCCCCcCchhhHHHHHHHHHHHHhCCCCccCCc
Confidence 45678999999999876443221 11234568999999999876 468999999999999999999999996543
No 225
>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=7.9e-38 Score=302.15 Aligned_cols=257 Identities=26% Similarity=0.432 Sum_probs=203.2
Q ss_pred cccccccccccccceeEEEEEecCCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCCCCccccc
Q 011360 192 DCFASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQIRHRNILPLL 271 (487)
Q Consensus 192 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~ 271 (487)
++|++.+.||+|+||.||++.. ..++..||+|++... ........+.+|+.+++.++||||++++
T Consensus 5 ~~~~~~~~ig~g~~g~v~~~~~-~~~~~~~a~k~~~~~--------------~~~~~~~~~~~E~~~l~~l~h~~i~~~~ 69 (284)
T cd06620 5 EDLETISDLGAGNGGSVSKVKH-IPTGTVMAKKVVHIG--------------AKSSVRKQILRELQIMHECRSPYIVSFY 69 (284)
T ss_pred HHHHHHHHcCCCCCeEEEEEEE-cCCCcEEEEEEEEec--------------CcchHHHHHHHHHHHHHHcCCCCcceEe
Confidence 4689999999999999999975 457889999987431 1223456788999999999999999999
Q ss_pred eEEecCCeeEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCCE
Q 011360 272 AHMVRPDCHLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVLLNDDMEA 351 (487)
Q Consensus 272 ~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nill~~~~~~ 351 (487)
+++...+..++||||+++++|.+++.. ...+++..+..++.+++.||.|||+ ..|++||||+|+||+++.++.+
T Consensus 70 ~~~~~~~~~~lv~e~~~~~~L~~~~~~----~~~~~~~~~~~~~~~i~~~l~~LH~--~~~i~H~dl~p~nil~~~~~~~ 143 (284)
T cd06620 70 GAFLNENNICMCMEFMDCGSLDRIYKK----GGPIPVEILGKIAVAVVEGLTYLYN--VHRIMHRDIKPSNILVNSRGQI 143 (284)
T ss_pred eeEecCCEEEEEEecCCCCCHHHHHHh----ccCCCHHHHHHHHHHHHHHHHHHHH--hcCeeccCCCHHHEEECCCCcE
Confidence 999999999999999999999998864 3568999999999999999999963 3579999999999999999999
Q ss_pred EEeccCCccccCCCCceeeEeeecccccccCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCccccCCCCc-----cccH
Q 011360 352 CISDLGLAMAIPDGYTRVLISYVLGTMAYIAPEYFQQPELSEKCDIFSFGMLLISLVRGVPSFVFHQNGEE-----ICSP 426 (487)
Q Consensus 352 kl~DFg~s~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DvwslG~~l~elltg~~pf~~~~~~~~-----~~~~ 426 (487)
+|+|||++........ ....|+..|+|||++.+..++.++|+|||||++|+++||..||.......+ ....
T Consensus 144 ~l~d~gl~~~~~~~~~----~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~ 219 (284)
T cd06620 144 KLCDFGVSGELINSIA----DTFVGTSTYMSPERIQGGKYTVKSDVWSLGISIIELALGKFPFAFSNIDDDGQDDPMGIL 219 (284)
T ss_pred EEccCCcccchhhhcc----CccccCcccCCHHHHccCCCCccchHHHHHHHHHHHHhCCCCCcccchhhhhhhhhhHHH
Confidence 9999999865432221 234689999999999888899999999999999999999999964433211 1111
Q ss_pred HHHHHHHhcCCCCCccCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCChHHHHHH
Q 011360 427 EWLRKVMNSKNPSRAIDPRLPGNGYEKKMLHVLKIAYICTLHDPEERPNSQYVRCR 482 (487)
Q Consensus 427 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~~il~~ 482 (487)
++.........+ .++. ...+.++.+++.+||+.||++|||+.++++.
T Consensus 220 ~~~~~~~~~~~~------~~~~---~~~~~~~~~li~~~l~~dp~~Rpt~~e~~~~ 266 (284)
T cd06620 220 DLLQQIVQEPPP------RLPS---SDFPEDLRDFVDACLLKDPTERPTPQQLCAM 266 (284)
T ss_pred HHHHHHhhccCC------CCCc---hhcCHHHHHHHHHHhcCCcccCcCHHHHhcC
Confidence 222222222111 1111 1234568899999999999999999999874
No 226
>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase. Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki
Probab=100.00 E-value=1e-37 Score=296.27 Aligned_cols=247 Identities=27% Similarity=0.409 Sum_probs=196.1
Q ss_pred cccccccccccccceeEEEEEecCCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCCCCccccc
Q 011360 192 DCFASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQIRHRNILPLL 271 (487)
Q Consensus 192 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~ 271 (487)
+.|.+.+.||.|+||.||++.. +++.||+|.+.. ......+.+|+.++..++||||++++
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~---~~~~~~iK~~~~-----------------~~~~~~~~~e~~~l~~~~~~~i~~~~ 65 (254)
T cd05083 6 QKLTLGEIIGEGEFGAVLQGEY---TGQKVAVKNIKC-----------------DVTAQAFLEETAVMTKLHHKNLVRLL 65 (254)
T ss_pred HHceeeeeeccCCCCceEeccc---CCCceEEEeecC-----------------cchHHHHHHHHHHHHhCCCCCcCeEE
Confidence 4589999999999999999864 678899998732 11234678899999999999999999
Q ss_pred eEEecCCeeEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCCE
Q 011360 272 AHMVRPDCHLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVLLNDDMEA 351 (487)
Q Consensus 272 ~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nill~~~~~~ 351 (487)
+++... ..+++|||+++++|.+++.. .....+++..+..++.|++.||.|| |+.|++||||||+||+++.++.+
T Consensus 66 ~~~~~~-~~~~v~e~~~~~~L~~~l~~--~~~~~~~~~~~~~~~~qi~~al~~l---H~~~~~H~dl~p~nili~~~~~~ 139 (254)
T cd05083 66 GVILHN-GLYIVMELMSKGNLVNFLRT--RGRALVSVIQLLQFSLDVAEGMEYL---ESKKLVHRDLAARNILVSEDGVA 139 (254)
T ss_pred EEEcCC-CcEEEEECCCCCCHHHHHHh--cCcCCCCHHHHHHHHHHHHHHHHHH---HhCCeeccccCcceEEEcCCCcE
Confidence 988654 57999999999999999875 2344688999999999999999999 77899999999999999999999
Q ss_pred EEeccCCccccCCCCceeeEeeecccccccCCcccCCCCCCchhHHHHHHHHHHHHHh-CCCCccccCCCCccccHHHHH
Q 011360 352 CISDLGLAMAIPDGYTRVLISYVLGTMAYIAPEYFQQPELSEKCDIFSFGMLLISLVR-GVPSFVFHQNGEEICSPEWLR 430 (487)
Q Consensus 352 kl~DFg~s~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DvwslG~~l~ellt-g~~pf~~~~~~~~~~~~~~~~ 430 (487)
+|+|||++........ ....+..|+|||.+.+..++.++|+||||+++|+|++ |.+||.... ..+...
T Consensus 140 kl~Dfg~~~~~~~~~~-----~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~------~~~~~~ 208 (254)
T cd05083 140 KVSDFGLARVGSMGVD-----NSKLPVKWTAPEALKHKKFSSKSDVWSYGVLLWEVFSYGRAPYPKMS------LKEVKE 208 (254)
T ss_pred EECCCccceeccccCC-----CCCCCceecCHHHhccCCcCchhhHHHHHHHHHHHHhCCCCCCccCC------HHHHHH
Confidence 9999999876433211 2234678999999988899999999999999999998 899994332 122222
Q ss_pred HHHhcCCCCCccCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCChHHHHHHHhh
Q 011360 431 KVMNSKNPSRAIDPRLPGNGYEKKMLHVLKIAYICTLHDPEERPNSQYVRCRLSQ 485 (487)
Q Consensus 431 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~~il~~L~~ 485 (487)
.......+. ... ..+..+.+++.+||+.+|++|||+.+|+..|++
T Consensus 209 ~~~~~~~~~--~~~--------~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~ 253 (254)
T cd05083 209 CVEKGYRME--PPE--------GCPADVYVLMTSCWETEPKKRPSFHKLREKLEK 253 (254)
T ss_pred HHhCCCCCC--CCC--------cCCHHHHHHHHHHcCCChhhCcCHHHHHHHHcc
Confidence 222211110 111 123568899999999999999999999998864
No 227
>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a
Probab=100.00 E-value=1.5e-37 Score=295.11 Aligned_cols=251 Identities=31% Similarity=0.460 Sum_probs=201.7
Q ss_pred ccccccccccccccceeEEEEEecCCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCCCCcccc
Q 011360 191 EDCFASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQIRHRNILPL 270 (487)
Q Consensus 191 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l 270 (487)
++.|.+.+.||.|+||.||+|.+. .++..+++|.+.. . .....+.+|+.+++.++||||+++
T Consensus 2 ~~~y~~~~~i~~g~~~~v~~~~~~-~~~~~~~~k~~~~----------------~-~~~~~~~~e~~~~~~l~~~~i~~~ 63 (256)
T cd06612 2 EEVFDILEKLGEGSYGSVYKAIHK-ETGQVVAIKVVPV----------------E-EDLQEIIKEISILKQCDSPYIVKY 63 (256)
T ss_pred cccchhhhhhcCCCCeEEEEEEEc-CCCcEEEEEEeec----------------H-HHHHHHHHHHHHHHhCCCCcEeee
Confidence 457999999999999999999864 4678999998732 1 115678899999999999999999
Q ss_pred ceEEecCCeeEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCC
Q 011360 271 LAHMVRPDCHLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVLLNDDME 350 (487)
Q Consensus 271 ~~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nill~~~~~ 350 (487)
++++......|+++||+++++|.+++.. ....+++..+..++.|++.||.|| |+.|++|+||+|+||+++.++.
T Consensus 64 ~~~~~~~~~~~l~~e~~~~~~L~~~l~~---~~~~l~~~~~~~~~~~l~~~l~~l---h~~~i~H~dl~~~ni~~~~~~~ 137 (256)
T cd06612 64 YGSYFKNTDLWIVMEYCGAGSVSDIMKI---TNKTLTEEEIAAILYQTLKGLEYL---HSNKKIHRDIKAGNILLNEEGQ 137 (256)
T ss_pred eeeeecCCcEEEEEecCCCCcHHHHHHh---CccCCCHHHHHHHHHHHHHHHHHH---HHCCcccCCCCcceEEECCCCc
Confidence 9999999999999999999999999864 245789999999999999999999 6778999999999999999999
Q ss_pred EEEeccCCccccCCCCceeeEeeecccccccCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCccccCCCCccccHHHHH
Q 011360 351 ACISDLGLAMAIPDGYTRVLISYVLGTMAYIAPEYFQQPELSEKCDIFSFGMLLISLVRGVPSFVFHQNGEEICSPEWLR 430 (487)
Q Consensus 351 ~kl~DFg~s~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DvwslG~~l~elltg~~pf~~~~~~~~~~~~~~~~ 430 (487)
++|+|||++......... .....++..|+|||++.+..++.++||||||+++|+|++|..||....... ...
T Consensus 138 ~~l~dfg~~~~~~~~~~~--~~~~~~~~~y~~PE~~~~~~~~~~~Di~s~G~il~~l~~g~~p~~~~~~~~------~~~ 209 (256)
T cd06612 138 AKLADFGVSGQLTDTMAK--RNTVIGTPFWMAPEVIQEIGYNNKADIWSLGITAIEMAEGKPPYSDIHPMR------AIF 209 (256)
T ss_pred EEEcccccchhcccCccc--cccccCCccccCHHHHhcCCCCchhhHHHHHHHHHHHHhCCCCCCCcchhh------hhh
Confidence 999999998876543321 123457889999999998899999999999999999999999995432211 111
Q ss_pred HHHhcCCCCCccCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCChHHHHH
Q 011360 431 KVMNSKNPSRAIDPRLPGNGYEKKMLHVLKIAYICTLHDPEERPNSQYVRC 481 (487)
Q Consensus 431 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~~il~ 481 (487)
... .... +.+. .......++.+++.+||+.+|++|||++++++
T Consensus 210 ~~~--~~~~----~~~~--~~~~~~~~~~~~i~~~l~~~P~~Rps~~~il~ 252 (256)
T cd06612 210 MIP--NKPP----PTLS--DPEKWSPEFNDFVKKCLVKDPEERPSAIQLLQ 252 (256)
T ss_pred hhc--cCCC----CCCC--chhhcCHHHHHHHHHHHhcChhhCcCHHHHhc
Confidence 111 1110 0010 11223456899999999999999999999985
No 228
>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity. Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....
Probab=100.00 E-value=1.2e-38 Score=303.19 Aligned_cols=255 Identities=29% Similarity=0.461 Sum_probs=196.8
Q ss_pred cccccccccccceeEEEEEecCCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCCCCccccceE
Q 011360 194 FASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQIRHRNILPLLAH 273 (487)
Q Consensus 194 ~~~~~~lg~G~~g~v~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~ 273 (487)
|++.+.||+|+||.||++.. ..+++.||+|.+.... ...........|+.++++++||||++++++
T Consensus 1 y~~~~~lg~G~~g~v~~~~~-~~~~~~~~~K~~~~~~-------------~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~ 66 (260)
T PF00069_consen 1 YRLVKKLGSGGFGTVYKAKN-KKNGQKVAVKIIDKSE-------------IEEEEREENIREIKILRRLRHPNIVQILDV 66 (260)
T ss_dssp EEEEEEEEEESSEEEEEEEE-TTTTEEEEEEEEESTT-------------HHHHHHHHHHHHHHHHHHHTBTTBCHEEEE
T ss_pred CEEeEEEEeCCCEEEEEEEE-CCCCeEEEEEEecccc-------------ccccccchhhhhhhcccccccccccccccc
Confidence 67889999999999999975 4578899999985421 112222233459999999999999999999
Q ss_pred EecCCeeEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCCEEE
Q 011360 274 MVRPDCHLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVLLNDDMEACI 353 (487)
Q Consensus 274 ~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nill~~~~~~kl 353 (487)
+......++||||+++++|.+++.. ...+++..+..++.|++.||.+| |+.|++|+||||+||+++.++.++|
T Consensus 67 ~~~~~~~~~v~~~~~~~~L~~~l~~----~~~~~~~~~~~~~~qi~~~L~~L---h~~~i~H~dikp~NIl~~~~~~~~l 139 (260)
T PF00069_consen 67 FQDDNYLYIVMEYCPGGSLQDYLQK----NKPLSEEEILKIAYQILEALAYL---HSKGIVHRDIKPENILLDENGEVKL 139 (260)
T ss_dssp EEESSEEEEEEEEETTEBHHHHHHH----HSSBBHHHHHHHHHHHHHHHHHH---HHTTEEESSBSGGGEEESTTSEEEE
T ss_pred ccccccccccccccccccccccccc----ccccccccccccccccccccccc---ccccccccccccccccccccccccc
Confidence 9999999999999999999999973 46789999999999999999999 6678999999999999999999999
Q ss_pred eccCCccccCCCCceeeEeeecccccccCCcccC-CCCCCchhHHHHHHHHHHHHHhCCCCccccCCCCccccHHHHHHH
Q 011360 354 SDLGLAMAIPDGYTRVLISYVLGTMAYIAPEYFQ-QPELSEKCDIFSFGMLLISLVRGVPSFVFHQNGEEICSPEWLRKV 432 (487)
Q Consensus 354 ~DFg~s~~~~~~~~~~~~~~~~gt~~y~aPE~l~-~~~~~~~~DvwslG~~l~elltg~~pf~~~~~~~~~~~~~~~~~~ 432 (487)
+|||.+....... .......++..|+|||++. +..++.++||||+|+++|+|++|..||..... ..........
T Consensus 140 ~Dfg~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~p~~~~~~---~~~~~~~~~~ 214 (260)
T PF00069_consen 140 IDFGSSVKLSENN--ENFNPFVGTPEYMAPEVLQQGKKYTRKSDIWSLGIILYELLTGKLPFEESNS---DDQLEIIEKI 214 (260)
T ss_dssp SSGTTTEESTSTT--SEBSSSSSSGGGSCHHHHTTTSSBSTHHHHHHHHHHHHHHHHSSSSSTTSSH---HHHHHHHHHH
T ss_pred ccccccccccccc--cccccccccccccccccccccccccccccccccccccccccccccccccccc---hhhhhhhhhc
Confidence 9999987542211 1224556899999999998 77899999999999999999999999954310 0111111111
Q ss_pred HhcCCCCCccCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCChHHHHH
Q 011360 433 MNSKNPSRAIDPRLPGNGYEKKMLHVLKIAYICTLHDPEERPNSQYVRC 481 (487)
Q Consensus 433 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~~il~ 481 (487)
....... . . .........+.+++.+||+.||++|||+.++++
T Consensus 215 ~~~~~~~----~-~--~~~~~~~~~l~~li~~~l~~~p~~R~~~~~l~~ 256 (260)
T PF00069_consen 215 LKRPLPS----S-S--QQSREKSEELRDLIKKMLSKDPEQRPSAEELLK 256 (260)
T ss_dssp HHTHHHH----H-T--TSHTTSHHHHHHHHHHHSSSSGGGSTTHHHHHT
T ss_pred ccccccc----c-c--cccchhHHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 1100000 0 0 000001267999999999999999999999875
No 229
>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ
Probab=100.00 E-value=2.1e-37 Score=295.20 Aligned_cols=254 Identities=29% Similarity=0.433 Sum_probs=201.3
Q ss_pred cccccccccccccceeEEEEEecCCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCCCCccccc
Q 011360 192 DCFASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQIRHRNILPLL 271 (487)
Q Consensus 192 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~ 271 (487)
++|.+.+.||.|+||.||+|... .++..+++|.+... .......+.+|+.++++++||||++++
T Consensus 3 ~~~~~~~~l~~g~~~~v~~~~~~-~~~~~~~ik~~~~~---------------~~~~~~~~~~e~~~l~~~~h~~i~~~~ 66 (262)
T cd06613 3 EDYELIQRIGSGTYGDVYKARDI-ATGELVAIKVIKLE---------------PGDDFEIIQQEISMLKECRHPNIVAYF 66 (262)
T ss_pred cceEEEEEecCCCceEEEEeEec-CCCCEEEEEEEEcC---------------chhhHHHHHHHHHHHHhCCCCChhceE
Confidence 46999999999999999999753 46788999988431 112456778899999999999999999
Q ss_pred eEEecCCeeEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCCE
Q 011360 272 AHMVRPDCHLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVLLNDDMEA 351 (487)
Q Consensus 272 ~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nill~~~~~~ 351 (487)
+++...+..|++|||+++++|.+++.. ....+++..+..++.|++.||.|| |+.|++|+||+|+||+++.++.+
T Consensus 67 ~~~~~~~~~~l~~e~~~~~~l~~~~~~---~~~~l~~~~~~~~~~ql~~~l~~l---h~~~i~h~dl~p~ni~i~~~~~~ 140 (262)
T cd06613 67 GSYLRRDKLWIVMEYCGGGSLQDIYQV---TRGPLSELQIAYVCRETLKGLAYL---HETGKIHRDIKGANILLTEDGDV 140 (262)
T ss_pred EEEEeCCEEEEEEeCCCCCcHHHHHHh---hccCCCHHHHHHHHHHHHHHHHHH---HhCCceecCCChhhEEECCCCCE
Confidence 999999999999999999999998864 235688999999999999999999 77889999999999999999999
Q ss_pred EEeccCCccccCCCCceeeEeeecccccccCCcccCCC---CCCchhHHHHHHHHHHHHHhCCCCccccCCCCccccHHH
Q 011360 352 CISDLGLAMAIPDGYTRVLISYVLGTMAYIAPEYFQQP---ELSEKCDIFSFGMLLISLVRGVPSFVFHQNGEEICSPEW 428 (487)
Q Consensus 352 kl~DFg~s~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~---~~~~~~DvwslG~~l~elltg~~pf~~~~~~~~~~~~~~ 428 (487)
+|+|||++......... .....++..|+|||.+.+. .++.++|+||||+++|+|+||.+||..... ...
T Consensus 141 ~l~d~g~~~~~~~~~~~--~~~~~~~~~y~~Pe~~~~~~~~~~~~~~Di~slG~~l~~~~tg~~p~~~~~~------~~~ 212 (262)
T cd06613 141 KLADFGVSAQLTATIAK--RKSFIGTPYWMAPEVAAVERKGGYDGKCDIWALGITAIELAELQPPMFDLHP------MRA 212 (262)
T ss_pred EECccccchhhhhhhhc--cccccCCccccCchhhcccccCCcCchhhhHHHHHHHHHHHhCCCCCCCCCH------HHH
Confidence 99999998765433211 1234578899999998776 889999999999999999999999943321 111
Q ss_pred HHHHHhcCCCCCccCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCChHHHHH
Q 011360 429 LRKVMNSKNPSRAIDPRLPGNGYEKKMLHVLKIAYICTLHDPEERPNSQYVRC 481 (487)
Q Consensus 429 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~~il~ 481 (487)
........... +.+ ......+.++.+++.+||..+|.+|||+++|+.
T Consensus 213 ~~~~~~~~~~~----~~~--~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~ 259 (262)
T cd06613 213 LFLISKSNFPP----PKL--KDKEKWSPVFHDFIKKCLTKDPKKRPTATKLLQ 259 (262)
T ss_pred HHHHHhccCCC----ccc--cchhhhhHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 11111111110 001 112234567899999999999999999999874
No 230
>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=2.7e-38 Score=306.45 Aligned_cols=255 Identities=26% Similarity=0.372 Sum_probs=201.2
Q ss_pred hccccccccccccccceeEEEEEecCCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccC-CCCCcc
Q 011360 190 KEDCFASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQI-RHRNIL 268 (487)
Q Consensus 190 ~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpnIv 268 (487)
....|++++.||+||.++||++.. .+...||+|++. ........+.-+.+|+..|.+| .|.+||
T Consensus 359 kg~~Yeilk~iG~GGSSkV~kV~~--s~~~iyalkkv~-------------~~~~D~qtl~gy~nEI~lL~KLkg~~~II 423 (677)
T KOG0596|consen 359 KGREYEILKQIGSGGSSKVFKVLN--SDKQIYALKKVV-------------LLEADNQTLDGYRNEIALLNKLKGHDKII 423 (677)
T ss_pred CcchhhHHHhhcCCCcceeeeeec--CCCcchhhhHHH-------------HhhcCHHHHHHHHHHHHHHHHhcCCceEE
Confidence 344699999999999999999953 456678888762 2334455677899999999999 789999
Q ss_pred ccceEEecCCeeEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCC
Q 011360 269 PLLAHMVRPDCHLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVLLNDD 348 (487)
Q Consensus 269 ~l~~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nill~~~ 348 (487)
++|+|-..++.+||||||= ..+|..+|... ....+...++.+..|++.++.++ |.+||||.||||.|+|+-.
T Consensus 424 qL~DYEv~d~~lYmvmE~G-d~DL~kiL~k~---~~~~~~~~lk~ywkqML~aV~~I---H~~gIVHSDLKPANFLlVk- 495 (677)
T KOG0596|consen 424 QLYDYEVTDGYLYMVMECG-DIDLNKILKKK---KSIDPDWFLKFYWKQMLLAVKTI---HQHGIVHSDLKPANFLLVK- 495 (677)
T ss_pred EEeeeeccCceEEEEeecc-cccHHHHHHhc---cCCCchHHHHHHHHHHHHHHHHH---HHhceeecCCCcccEEEEe-
Confidence 9999999999999999975 66999999862 22333237888999999999999 8889999999999999984
Q ss_pred CCEEEeccCCccccCCCCceeeEeeecccccccCCcccCCC-----------CCCchhHHHHHHHHHHHHHhCCCCcccc
Q 011360 349 MEACISDLGLAMAIPDGYTRVLISYVLGTMAYIAPEYFQQP-----------ELSEKCDIFSFGMLLISLVRGVPSFVFH 417 (487)
Q Consensus 349 ~~~kl~DFg~s~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~-----------~~~~~~DvwslG~~l~elltg~~pf~~~ 417 (487)
|.+||+|||+|..+....+.......+||+.||+||.+... ..+.++|||||||+||+|+.|++||...
T Consensus 496 G~LKLIDFGIA~aI~~DTTsI~kdsQvGT~NYMsPEAl~~~~s~~~~~~~k~Ki~r~SDvWSLGCILYqMvYgktPf~~~ 575 (677)
T KOG0596|consen 496 GRLKLIDFGIANAIQPDTTSIVKDSQVGTVNYMSPEALTDMSSSRENGKSKIKISRKSDVWSLGCILYQMVYGKTPFGQI 575 (677)
T ss_pred eeEEeeeechhcccCccccceeeccccCcccccCHHHHhhccccccCCCcceeecCccchhhhhhHHHHHHhcCCchHHH
Confidence 58999999999999988888887888999999999988632 2467899999999999999999999322
Q ss_pred CCCCccccHHHHHHHHhcCCCCCccC-CCCCCCCcHHHHHHHHHHHhhccCCCCCCCCChHHHHH
Q 011360 418 QNGEEICSPEWLRKVMNSKNPSRAID-PRLPGNGYEKKMLHVLKIAYICTLHDPEERPNSQYVRC 481 (487)
Q Consensus 418 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~~il~ 481 (487)
.+ ...++..-..|...+. +.++.. .++.+++..||..||++|||..++++
T Consensus 576 ~n--------~~aKl~aI~~P~~~Iefp~~~~~------~~li~~mK~CL~rdPkkR~si~eLLq 626 (677)
T KOG0596|consen 576 IN--------QIAKLHAITDPNHEIEFPDIPEN------DELIDVMKCCLARDPKKRWSIPELLQ 626 (677)
T ss_pred HH--------HHHHHHhhcCCCccccccCCCCc------hHHHHHHHHHHhcCcccCCCcHHHhc
Confidence 11 2222222222211111 222222 12889999999999999999999885
No 231
>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros. Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male
Probab=100.00 E-value=1e-37 Score=298.66 Aligned_cols=255 Identities=27% Similarity=0.377 Sum_probs=195.5
Q ss_pred cccccccceeEEEEEecC-----CCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCCCCccccce
Q 011360 198 EKIGSGGCGEVYKAELPG-----SNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQIRHRNILPLLA 272 (487)
Q Consensus 198 ~~lg~G~~g~v~~~~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~ 272 (487)
+.||.|+||.||+|++.. .++..+|+|.+.. .........+.+|+.+++.++||||+++++
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~--------------~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~ 66 (269)
T cd05044 1 NFLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRK--------------GATDQEKKEFLKEAHLMSNFNHPNIVKLLG 66 (269)
T ss_pred CccccccceeEEeeeecccccCcccceeehhhhhhc--------------ccchhhHHHHHHHHHHHHhcCCCCeeeEee
Confidence 368999999999998632 2236788887622 111233456788999999999999999999
Q ss_pred EEecCCeeEEEEEecCCCCHHHHHhhhhc---CCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCC
Q 011360 273 HMVRPDCHLLVYEFMKNGSLQDILDDVSR---GRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVLLNDDM 349 (487)
Q Consensus 273 ~~~~~~~~~lv~E~~~~gsL~~~l~~~~~---~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nill~~~~ 349 (487)
++...+..++||||+++++|.+++..... ....+++..+..++.|++.||.|| |+.+++|+||+|+||+++.++
T Consensus 67 ~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~l---H~~~i~H~dl~p~nil~~~~~ 143 (269)
T cd05044 67 VCLLNEPQYIIMELMEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYL---EQMHFIHRDLAARNCLVSEKG 143 (269)
T ss_pred eecCCCCeEEEEeccCCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHH---HhCCcccCCCChheEEEecCC
Confidence 99999999999999999999999975322 234578899999999999999999 677899999999999999877
Q ss_pred -----CEEEeccCCccccCCCCceeeEeeecccccccCCcccCCCCCCchhHHHHHHHHHHHHHh-CCCCccccCCCCcc
Q 011360 350 -----EACISDLGLAMAIPDGYTRVLISYVLGTMAYIAPEYFQQPELSEKCDIFSFGMLLISLVR-GVPSFVFHQNGEEI 423 (487)
Q Consensus 350 -----~~kl~DFg~s~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DvwslG~~l~ellt-g~~pf~~~~~~~~~ 423 (487)
.++|+|||++................++..|+|||++.+..++.++||||||+++|+|+| |..||.....
T Consensus 144 ~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~ellt~g~~p~~~~~~---- 219 (269)
T cd05044 144 YDADRVVKIGDFGLARDIYKSDYYRKEGEGLLPVRWMAPESLLDGKFTTQSDVWSFGVLMWEILTLGQQPYPALNN---- 219 (269)
T ss_pred CCCCcceEECCcccccccccccccccCcccCCCccccCHHHHccCCcccchhHHHHHHHHHHHHHcCCCCCcccCH----
Confidence 899999999876543322211122345788999999998899999999999999999998 9999943221
Q ss_pred ccHHHHHHHHhcCCCCCccCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCChHHHHHHHhh
Q 011360 424 CSPEWLRKVMNSKNPSRAIDPRLPGNGYEKKMLHVLKIAYICTLHDPEERPNSQYVRCRLSQ 485 (487)
Q Consensus 424 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~~il~~L~~ 485 (487)
.+..........+ ..+ ...+..+.+++.+||..+|++|||+.+|++.|+.
T Consensus 220 --~~~~~~~~~~~~~------~~~----~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~ 269 (269)
T cd05044 220 --QEVLQHVTAGGRL------QKP----ENCPDKIYQLMTNCWAQDPSERPTFDRIQEILQN 269 (269)
T ss_pred --HHHHHHHhcCCcc------CCc----ccchHHHHHHHHHHcCCCcccCCCHHHHHHHHhC
Confidence 1222222111111 011 1234568899999999999999999999998863
No 232
>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4. Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.
Probab=100.00 E-value=2.6e-37 Score=295.36 Aligned_cols=257 Identities=23% Similarity=0.354 Sum_probs=199.0
Q ss_pred ccccccccccccceeEEEEEecCCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCCCCccccce
Q 011360 193 CFASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQIRHRNILPLLA 272 (487)
Q Consensus 193 ~~~~~~~lg~G~~g~v~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~ 272 (487)
+|.+.+.||.|+||.||+|.. .++..+|+|.+...... ..........+.+|+.+++.++||||+++++
T Consensus 1 ~~~~~~~ig~g~~~~v~~~~~--~~~~~~avk~~~~~~~~---------~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~ 69 (265)
T cd06631 1 EWTKGEVLGKGAYGTVYCGLT--NQGQLIAVKQVELDTSN---------VLAAEKEYEKLQEEVDLLKSLKHVNIVQYLG 69 (265)
T ss_pred CccccceEeccCCeEEEEEEE--cCCCeEEEEEeecCccc---------hhhHHHHHHHHHHHHHHHHhcCCCCEeeEee
Confidence 377889999999999999975 37889999987431110 0111233467889999999999999999999
Q ss_pred EEecCCeeEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCCEE
Q 011360 273 HMVRPDCHLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVLLNDDMEAC 352 (487)
Q Consensus 273 ~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nill~~~~~~k 352 (487)
++...+..+++|||+++++|.+++.. ...+++..+..++.|++.||+|| |+.|++|+||+|+||+++.++.++
T Consensus 70 ~~~~~~~~~lv~e~~~~~~L~~~l~~----~~~~~~~~~~~~~~qi~~~l~~l---H~~~i~H~dl~p~nil~~~~~~~~ 142 (265)
T cd06631 70 TCLDDNTISIFMEFVPGGSISSILNR----FGPLPEPVFCKYTKQILDGVAYL---HNNCVVHRDIKGNNVMLMPNGIIK 142 (265)
T ss_pred EeecCCeEEEEEecCCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHH---HhCCcccCCcCHHhEEECCCCeEE
Confidence 99999999999999999999999864 34678899999999999999999 677899999999999999999999
Q ss_pred EeccCCccccCCCC----ceeeEeeecccccccCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCccccCCCCccccHHH
Q 011360 353 ISDLGLAMAIPDGY----TRVLISYVLGTMAYIAPEYFQQPELSEKCDIFSFGMLLISLVRGVPSFVFHQNGEEICSPEW 428 (487)
Q Consensus 353 l~DFg~s~~~~~~~----~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DvwslG~~l~elltg~~pf~~~~~~~~~~~~~~ 428 (487)
|+|||++....... .........++..|+|||.+.+..++.++|+||||+++|+|++|..||..... ...
T Consensus 143 l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~------~~~ 216 (265)
T cd06631 143 LIDFGCARRLAWVGLHGTHSNMLKSMHGTPYWMAPEVINESGYGRKSDIWSIGCTVFEMATGKPPLASMDR------LAA 216 (265)
T ss_pred eccchhhHhhhhccccccccccccccCCCccccChhhhcCCCCcchhhHHHHHHHHHHHHhCCCccccCCh------HHH
Confidence 99999987643211 11111234588999999999988899999999999999999999999953321 111
Q ss_pred HHHHHhcCCCCCccCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCChHHHHH
Q 011360 429 LRKVMNSKNPSRAIDPRLPGNGYEKKMLHVLKIAYICTLHDPEERPNSQYVRC 481 (487)
Q Consensus 429 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~~il~ 481 (487)
........... +.++. .....+.+++.+||+.+|++|||+.+++.
T Consensus 217 ~~~~~~~~~~~----~~~~~----~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~ 261 (265)
T cd06631 217 MFYIGAHRGLM----PRLPD----SFSAAAIDFVTSCLTRDQHERPSALQLLR 261 (265)
T ss_pred HHHhhhccCCC----CCCCC----CCCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 11111111111 11221 12356889999999999999999999875
No 233
>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4. Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s
Probab=100.00 E-value=2.4e-37 Score=297.17 Aligned_cols=261 Identities=21% Similarity=0.360 Sum_probs=201.4
Q ss_pred cccccccccccccceeEEEEEecC----CCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCCCCc
Q 011360 192 DCFASLEKIGSGGCGEVYKAELPG----SNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQIRHRNI 267 (487)
Q Consensus 192 ~~~~~~~~lg~G~~g~v~~~~~~~----~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnI 267 (487)
++|.+...||.|+||.||+|+... .+...+++|.+.. .........+.+|+.++++++||||
T Consensus 5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~--------------~~~~~~~~~~~~E~~~l~~l~h~~i 70 (275)
T cd05046 5 SNLQEITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQK--------------TKDENLQSEFRRELDMFRKLSHKNV 70 (275)
T ss_pred HhceeeeeecccceeEEEEEEeccCCcCCCcceEEEEccCC--------------ccchHHHHHHHHHHHHHHhcCCcce
Confidence 458899999999999999998642 2346789987622 1112245678889999999999999
Q ss_pred cccceEEecCCeeEEEEEecCCCCHHHHHhhhhcC-----CCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCC
Q 011360 268 LPLLAHMVRPDCHLLVYEFMKNGSLQDILDDVSRG-----RRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRN 342 (487)
Q Consensus 268 v~l~~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~-----~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~N 342 (487)
+++++++...+..++||||+++|+|.+++...... ...+++..+..++.|++.||.|| |+.||+||||||+|
T Consensus 71 v~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~L---H~~~i~H~dlkp~N 147 (275)
T cd05046 71 VRLLGLCREAEPHYMILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHL---SNARFVHRDLAARN 147 (275)
T ss_pred eeeEEEECCCCcceEEEEecCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHh---hhcCcccCcCccce
Confidence 99999999989999999999999999999753211 12689999999999999999999 78889999999999
Q ss_pred EEeCCCCCEEEeccCCccccCCCCceeeEeeecccccccCCcccCCCCCCchhHHHHHHHHHHHHHh-CCCCccccCCCC
Q 011360 343 VLLNDDMEACISDLGLAMAIPDGYTRVLISYVLGTMAYIAPEYFQQPELSEKCDIFSFGMLLISLVR-GVPSFVFHQNGE 421 (487)
Q Consensus 343 ill~~~~~~kl~DFg~s~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DvwslG~~l~ellt-g~~pf~~~~~~~ 421 (487)
|+++.++.++++|||++........ .......++..|+|||.+.+..++.++||||||+++|++++ |..||.....
T Consensus 148 ili~~~~~~~l~~~~~~~~~~~~~~-~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~~~~~p~~~~~~-- 224 (275)
T cd05046 148 CLVSSQREVKVSLLSLSKDVYNSEY-YKLRNALIPLRWLAPEAVQEDDFSTKSDVWSFGVLMWEVFTQGELPFYGLSD-- 224 (275)
T ss_pred EEEeCCCcEEEcccccccccCcccc-cccCCceeEEeecChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCccccch--
Confidence 9999999999999999865432211 11123346778999999988888999999999999999999 7888843221
Q ss_pred ccccHHHHHHHHhcCCCCCccCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCChHHHHHHHhh
Q 011360 422 EICSPEWLRKVMNSKNPSRAIDPRLPGNGYEKKMLHVLKIAYICTLHDPEERPNSQYVRCRLSQ 485 (487)
Q Consensus 422 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~~il~~L~~ 485 (487)
....... ............ .+..+.+++.+||+.+|++|||+.++++.|.+
T Consensus 225 ----~~~~~~~-~~~~~~~~~~~~--------~~~~l~~~i~~~l~~~p~~Rp~~~~~l~~l~~ 275 (275)
T cd05046 225 ----EEVLNRL-QAGKLELPVPEG--------CPSRLYKLMTRCWAVNPKDRPSFSELVSALGE 275 (275)
T ss_pred ----HHHHHHH-HcCCcCCCCCCC--------CCHHHHHHHHHHcCCCcccCCCHHHHHHHhcC
Confidence 1222222 112211111111 22468899999999999999999999998863
No 234
>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom
Probab=100.00 E-value=3.9e-37 Score=293.77 Aligned_cols=242 Identities=21% Similarity=0.313 Sum_probs=185.5
Q ss_pred cccccccceeEEEEEecCC-----------CCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCCCC
Q 011360 198 EKIGSGGCGEVYKAELPGS-----------NGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQIRHRN 266 (487)
Q Consensus 198 ~~lg~G~~g~v~~~~~~~~-----------~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpn 266 (487)
+.||.|+||.||+|++... ....+++|.+.. ........+.+|+.++..++|||
T Consensus 1 ~~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~---------------~~~~~~~~~~~~~~~l~~l~hp~ 65 (262)
T cd05077 1 EHLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDP---------------SHRDISLAFFETASMMRQVSHKH 65 (262)
T ss_pred CccccCCcceEeeeecccCCCccccccchhhceeEEEeecCh---------------hhhhHHHHHHHHHHHHHhCCCCC
Confidence 3689999999999986321 123578887521 11223456778899999999999
Q ss_pred ccccceEEecCCeeEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeC
Q 011360 267 ILPLLAHMVRPDCHLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVLLN 346 (487)
Q Consensus 267 Iv~l~~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nill~ 346 (487)
|+++++++......+++|||+++|+|..++.. ....+++..+..++.|++.||+|| |++||+||||||+|||++
T Consensus 66 iv~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~---~~~~~~~~~~~~i~~qi~~~l~~l---H~~~ivH~dlkp~Nill~ 139 (262)
T cd05077 66 IVLLYGVCVRDVENIMVEEFVEFGPLDLFMHR---KSDVLTTPWKFKVAKQLASALSYL---EDKDLVHGNVCTKNILLA 139 (262)
T ss_pred EeeEEEEEecCCCCEEEEecccCCCHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHh---hhCCeECCCCCcccEEEe
Confidence 99999999999999999999999999888753 235689999999999999999999 788999999999999998
Q ss_pred CCCC-------EEEeccCCccccCCCCceeeEeeecccccccCCcccC-CCCCCchhHHHHHHHHHHHHH-hCCCCcccc
Q 011360 347 DDME-------ACISDLGLAMAIPDGYTRVLISYVLGTMAYIAPEYFQ-QPELSEKCDIFSFGMLLISLV-RGVPSFVFH 417 (487)
Q Consensus 347 ~~~~-------~kl~DFg~s~~~~~~~~~~~~~~~~gt~~y~aPE~l~-~~~~~~~~DvwslG~~l~ell-tg~~pf~~~ 417 (487)
.++. ++++|||++...... ....++..|+|||.+. +..++.++||||||+++|+|+ +|..||...
T Consensus 140 ~~~~~~~~~~~~~l~d~g~~~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~ 213 (262)
T cd05077 140 REGIDGECGPFIKLSDPGIPITVLSR------QECVERIPWIAPECVEDSKNLSIAADKWSFGTTLWEICYNGEIPLKDK 213 (262)
T ss_pred cCCccCCCCceeEeCCCCCCccccCc------ccccccccccChhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCc
Confidence 7664 899999998654322 2234788999999887 467899999999999999998 478887432
Q ss_pred CCCCccccHHHHHHHHhcCCCCCccCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCChHHHHHHHh
Q 011360 418 QNGEEICSPEWLRKVMNSKNPSRAIDPRLPGNGYEKKMLHVLKIAYICTLHDPEERPNSQYVRCRLS 484 (487)
Q Consensus 418 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~~il~~L~ 484 (487)
.. .+ .......... ... ....++.+++.+||+.||++||++.+|+..++
T Consensus 214 ~~------~~-~~~~~~~~~~--~~~---------~~~~~~~~li~~cl~~dp~~Rp~~~~il~~~~ 262 (262)
T cd05077 214 TL------AE-KERFYEGQCM--LVT---------PSCKELADLMTHCMNYDPNQRPFFRAIMRDIN 262 (262)
T ss_pred ch------hH-HHHHHhcCcc--CCC---------CChHHHHHHHHHHcCCChhhCcCHHHHHHhcC
Confidence 21 11 1111111110 000 11246889999999999999999999998763
No 235
>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)
Probab=100.00 E-value=1.8e-37 Score=297.90 Aligned_cols=249 Identities=31% Similarity=0.436 Sum_probs=200.2
Q ss_pred ccccccccccccceeEEEEEecCCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCCCCccccce
Q 011360 193 CFASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQIRHRNILPLLA 272 (487)
Q Consensus 193 ~~~~~~~lg~G~~g~v~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~ 272 (487)
+|.+.+.||.|++|.||+|.. ..++..||+|.+... ........+.+|+.+++.++||||+++++
T Consensus 2 ~y~~~~~lg~g~~~~v~~~~~-~~~~~~~~ik~~~~~--------------~~~~~~~~~~~e~~~l~~l~h~~i~~~~~ 66 (274)
T cd06609 2 LFTLLECIGKGSFGEVYKAID-KRTNQVVAIKVIDLE--------------EAEDEIEDIQQEIQFLSQCRSPYITKYYG 66 (274)
T ss_pred hhhhhhhhcCCCCeEEEEEEE-CCCCeEEEEEEeecc--------------ccchHHHHHHHHHHHHHHcCCCCeeeeeE
Confidence 588889999999999999975 457899999987321 11223456778999999999999999999
Q ss_pred EEecCCeeEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCCEE
Q 011360 273 HMVRPDCHLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVLLNDDMEAC 352 (487)
Q Consensus 273 ~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nill~~~~~~k 352 (487)
++..+...|+|+||+++++|.+++.. ..+++..+..++.|++.||.|| |+.+++||||+|+||+++.++.++
T Consensus 67 ~~~~~~~~~~v~e~~~~~~L~~~~~~-----~~~~~~~~~~~~~ql~~~l~~l---h~~~i~h~dl~p~ni~i~~~~~~~ 138 (274)
T cd06609 67 SFLKGSKLWIIMEYCGGGSCLDLLKP-----GKLDETYIAFILREVLLGLEYL---HEEGKIHRDIKAANILLSEEGDVK 138 (274)
T ss_pred EEEECCeEEEEEEeeCCCcHHHHHhh-----cCCCHHHHHHHHHHHHHHHHHH---HhCCcccCCCCHHHEEECCCCCEE
Confidence 99999999999999999999999864 2789999999999999999999 778899999999999999999999
Q ss_pred EeccCCccccCCCCceeeEeeecccccccCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCccccCCCCccccHHHHHHH
Q 011360 353 ISDLGLAMAIPDGYTRVLISYVLGTMAYIAPEYFQQPELSEKCDIFSFGMLLISLVRGVPSFVFHQNGEEICSPEWLRKV 432 (487)
Q Consensus 353 l~DFg~s~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DvwslG~~l~elltg~~pf~~~~~~~~~~~~~~~~~~ 432 (487)
|+|||++......... .....+++.|+|||.+.+..++.++||||||+++|+|+||..||..... .......
T Consensus 139 l~d~g~~~~~~~~~~~--~~~~~~~~~y~~PE~~~~~~~~~~sDv~slG~il~~l~tg~~p~~~~~~------~~~~~~~ 210 (274)
T cd06609 139 LADFGVSGQLTSTMSK--RNTFVGTPFWMAPEVIKQSGYDEKADIWSLGITAIELAKGEPPLSDLHP------MRVLFLI 210 (274)
T ss_pred Ecccccceeecccccc--cccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCcccCch------HHHHHHh
Confidence 9999999876543211 1334678899999999988899999999999999999999999954321 1111111
Q ss_pred HhcCCCCCccCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCChHHHHH
Q 011360 433 MNSKNPSRAIDPRLPGNGYEKKMLHVLKIAYICTLHDPEERPNSQYVRC 481 (487)
Q Consensus 433 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~~il~ 481 (487)
. ...+.. ++.. ..+..+.+++.+||..+|++|||++++++
T Consensus 211 ~-~~~~~~-----~~~~---~~~~~~~~~l~~~l~~~p~~Rpt~~~il~ 250 (274)
T cd06609 211 P-KNNPPS-----LEGN---KFSKPFKDFVSLCLNKDPKERPSAKELLK 250 (274)
T ss_pred h-hcCCCC-----Cccc---ccCHHHHHHHHHHhhCChhhCcCHHHHhh
Confidence 1 111111 1111 03346889999999999999999999975
No 236
>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase. Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions
Probab=100.00 E-value=3.1e-37 Score=295.66 Aligned_cols=257 Identities=22% Similarity=0.321 Sum_probs=199.6
Q ss_pred cccccccccccccceeEEEEEecCC--CCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCCCCccc
Q 011360 192 DCFASLEKIGSGGCGEVYKAELPGS--NGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQIRHRNILP 269 (487)
Q Consensus 192 ~~~~~~~~lg~G~~g~v~~~~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~ 269 (487)
++|.+.+.||.|+||.||+|.+... +...||+|..... ......+.+.+|+.+++.+.||||++
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~--------------~~~~~~~~~~~e~~~l~~~~h~~i~~ 71 (270)
T cd05056 6 EDITLGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNC--------------TSPSVREKFLQEAYIMRQFDHPHIVK 71 (270)
T ss_pred hhceeeeeeCCccceeEEEEEEecCCCCCcceEEEecCCc--------------CCHHHHHHHHHHHHHHHhCCCCchhc
Confidence 4588899999999999999976422 2346899976321 11234557888999999999999999
Q ss_pred cceEEecCCeeEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCC
Q 011360 270 LLAHMVRPDCHLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVLLNDDM 349 (487)
Q Consensus 270 l~~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nill~~~~ 349 (487)
+++++.+ +..++||||+++|+|.+++.. ....+++..+..++.|++.||.|| |+.|++||||||+||+++.++
T Consensus 72 ~~~~~~~-~~~~lv~e~~~~~~L~~~l~~---~~~~~~~~~~~~~~~~l~~~l~~l---H~~~~~H~dl~p~nili~~~~ 144 (270)
T cd05056 72 LIGVITE-NPVWIVMELAPLGELRSYLQV---NKYSLDLASLILYSYQLSTALAYL---ESKRFVHRDIAARNVLVSSPD 144 (270)
T ss_pred eeEEEcC-CCcEEEEEcCCCCcHHHHHHh---CCCCCCHHHHHHHHHHHHHHHHHH---HhCCeeccccChheEEEecCC
Confidence 9998865 567899999999999999964 234589999999999999999999 678899999999999999999
Q ss_pred CEEEeccCCccccCCCCceeeEeeecccccccCCcccCCCCCCchhHHHHHHHHHHHHHh-CCCCccccCCCCccccHHH
Q 011360 350 EACISDLGLAMAIPDGYTRVLISYVLGTMAYIAPEYFQQPELSEKCDIFSFGMLLISLVR-GVPSFVFHQNGEEICSPEW 428 (487)
Q Consensus 350 ~~kl~DFg~s~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DvwslG~~l~ellt-g~~pf~~~~~~~~~~~~~~ 428 (487)
.++|+|||++.......... .....+++.|+|||.+....++.++||||||+++|++++ |..||..... .+.
T Consensus 145 ~~~l~d~g~~~~~~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~------~~~ 217 (270)
T cd05056 145 CVKLGDFGLSRYLEDESYYK-ASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMLGVKPFQGVKN------NDV 217 (270)
T ss_pred CeEEccCceeeeccccccee-cCCCCccccccChhhhccCCCCchhhhHHHHHHHHHHHHcCCCCCCCCCH------HHH
Confidence 99999999987654432111 122334578999999988889999999999999999996 9999944322 122
Q ss_pred HHHHHhcCCCCCccCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCChHHHHHHHhhh
Q 011360 429 LRKVMNSKNPSRAIDPRLPGNGYEKKMLHVLKIAYICTLHDPEERPNSQYVRCRLSQL 486 (487)
Q Consensus 429 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~~il~~L~~l 486 (487)
.........+ ...+. .+..+.+++.+||..+|++|||+.++++.|+.+
T Consensus 218 ~~~~~~~~~~--~~~~~--------~~~~~~~li~~~l~~~P~~Rpt~~~~~~~l~~~ 265 (270)
T cd05056 218 IGRIENGERL--PMPPN--------CPPTLYSLMTKCWAYDPSKRPRFTELKAQLSDI 265 (270)
T ss_pred HHHHHcCCcC--CCCCC--------CCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence 2222222211 11112 234688999999999999999999999999876
No 237
>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=7.6e-38 Score=304.28 Aligned_cols=250 Identities=26% Similarity=0.397 Sum_probs=199.1
Q ss_pred cccccccccccccceeEEEEEecCCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCCCCccccc
Q 011360 192 DCFASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQIRHRNILPLL 271 (487)
Q Consensus 192 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~ 271 (487)
..|.+.+.||.|+||.||++.. ..++..||+|.+... .......+.+|+.+++.++||||++++
T Consensus 19 ~~y~~~~~lg~g~~g~v~~~~~-~~~~~~vaiK~~~~~---------------~~~~~~~~~~e~~~l~~~~h~~i~~~~ 82 (297)
T cd06656 19 KKYTRFEKIGQGASGTVYTAID-IATGQEVAIKQMNLQ---------------QQPKKELIINEILVMRENKNPNIVNYL 82 (297)
T ss_pred hhceeeeeeccCCCeEEEEEEE-CCCCCEEEEEEEecC---------------ccchHHHHHHHHHHHHhCCCCCEeeEE
Confidence 4699999999999999999964 457889999987421 111234577899999999999999999
Q ss_pred eEEecCCeeEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCCE
Q 011360 272 AHMVRPDCHLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVLLNDDMEA 351 (487)
Q Consensus 272 ~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nill~~~~~~ 351 (487)
+++..++..|+||||+++++|.+++.. ..+++..+..++.|++.||.|| |+.|++||||||+||+++.++.+
T Consensus 83 ~~~~~~~~~~lv~e~~~~~~L~~~~~~-----~~~~~~~~~~~~~~l~~~L~~L---H~~~i~H~dL~p~Nili~~~~~~ 154 (297)
T cd06656 83 DSYLVGDELWVVMEYLAGGSLTDVVTE-----TCMDEGQIAAVCRECLQALDFL---HSNQVIHRDIKSDNILLGMDGSV 154 (297)
T ss_pred EEEecCCEEEEeecccCCCCHHHHHHh-----CCCCHHHHHHHHHHHHHHHHHH---HHCCcccCCCCHHHEEECCCCCE
Confidence 999999999999999999999999863 4578889999999999999999 77889999999999999999999
Q ss_pred EEeccCCccccCCCCceeeEeeecccccccCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCccccCCCCccccHHHHHH
Q 011360 352 CISDLGLAMAIPDGYTRVLISYVLGTMAYIAPEYFQQPELSEKCDIFSFGMLLISLVRGVPSFVFHQNGEEICSPEWLRK 431 (487)
Q Consensus 352 kl~DFg~s~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DvwslG~~l~elltg~~pf~~~~~~~~~~~~~~~~~ 431 (487)
+|+|||++......... .....+++.|+|||.+.+..++.++|+||||+++|++++|..||......... ..
T Consensus 155 ~l~Dfg~~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~Di~slGvil~~l~tg~~pf~~~~~~~~~------~~ 226 (297)
T cd06656 155 KLTDFGFCAQITPEQSK--RSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRAL------YL 226 (297)
T ss_pred EECcCccceEccCCccC--cCcccCCccccCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcchhe------ee
Confidence 99999998765433221 12345888999999999888999999999999999999999999544321111 11
Q ss_pred HHhcCCCCCccCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCChHHHHH
Q 011360 432 VMNSKNPSRAIDPRLPGNGYEKKMLHVLKIAYICTLHDPEERPNSQYVRC 481 (487)
Q Consensus 432 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~~il~ 481 (487)
......+... ........+.+++.+||..+|++|||+.++++
T Consensus 227 ~~~~~~~~~~--------~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~ 268 (297)
T cd06656 227 IATNGTPELQ--------NPERLSAVFRDFLNRCLEMDVDRRGSAKELLQ 268 (297)
T ss_pred eccCCCCCCC--------CccccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 1111111100 11122345788999999999999999999986
No 238
>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl
Probab=100.00 E-value=7.8e-38 Score=304.81 Aligned_cols=260 Identities=20% Similarity=0.319 Sum_probs=195.1
Q ss_pred cccccccccccccceeEEEEEecCCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCCCCccccc
Q 011360 192 DCFASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQIRHRNILPLL 271 (487)
Q Consensus 192 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~ 271 (487)
+.|.+.+.||.|+||.||+|.. ..++..||+|.+.... .......+.+|+.+++.++||||++++
T Consensus 6 ~~y~~~~~lg~g~~g~vy~~~~-~~~~~~vaiK~~~~~~--------------~~~~~~~~~~E~~~l~~l~h~nI~~~~ 70 (301)
T cd07873 6 ETYIKLDKLGEGTYATVYKGRS-KLTDNLVALKEIRLEH--------------EEGAPCTAIREVSLLKDLKHANIVTLH 70 (301)
T ss_pred cceEEeeEeccCcCEEEEEEEE-cCCCcEEEEEEEeccc--------------ccCchhHHHHHHHHHHhcCCCCcceEE
Confidence 4699999999999999999975 4578899999874311 111223456799999999999999999
Q ss_pred eEEecCCeeEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCCE
Q 011360 272 AHMVRPDCHLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVLLNDDMEA 351 (487)
Q Consensus 272 ~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nill~~~~~~ 351 (487)
+++..++..++||||++ ++|.+++.. ....+++..+..++.|++.||.|| |+.|++|+||||+||+++.++.+
T Consensus 71 ~~~~~~~~~~lv~e~~~-~~l~~~l~~---~~~~~~~~~~~~~~~qi~~aL~~l---H~~~i~H~dlkp~Nil~~~~~~~ 143 (301)
T cd07873 71 DIIHTEKSLTLVFEYLD-KDLKQYLDD---CGNSINMHNVKLFLFQLLRGLNYC---HRRKVLHRDLKPQNLLINERGEL 143 (301)
T ss_pred EEEecCCeEEEEEeccc-cCHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHH---HhCCeeCCCCCHHHEEECCCCcE
Confidence 99999999999999996 589888764 245688999999999999999999 77899999999999999999999
Q ss_pred EEeccCCccccCCCCceeeEeeecccccccCCcccCC-CCCCchhHHHHHHHHHHHHHhCCCCccccCCCCccccHHHHH
Q 011360 352 CISDLGLAMAIPDGYTRVLISYVLGTMAYIAPEYFQQ-PELSEKCDIFSFGMLLISLVRGVPSFVFHQNGEEICSPEWLR 430 (487)
Q Consensus 352 kl~DFg~s~~~~~~~~~~~~~~~~gt~~y~aPE~l~~-~~~~~~~DvwslG~~l~elltg~~pf~~~~~~~~~~~~~~~~ 430 (487)
+|+|||++......... .....+++.|+|||.+.+ ..++.++||||||+++|+|+||.+||...+.. +...
T Consensus 144 kl~dfg~~~~~~~~~~~--~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~tg~~~f~~~~~~------~~~~ 215 (301)
T cd07873 144 KLADFGLARAKSIPTKT--YSNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMSTGRPLFPGSTVE------EQLH 215 (301)
T ss_pred EECcCcchhccCCCCCc--ccccceeecccCcHHHhCCCCCccHHHHHHHHHHHHHHHhCCCCCCCCCHH------HHHH
Confidence 99999998764332211 123457889999998865 45789999999999999999999999544321 1111
Q ss_pred HHHh--cCCCCCcc-------------CCCCCC----CCcHHHHHHHHHHHhhccCCCCCCCCChHHHHH
Q 011360 431 KVMN--SKNPSRAI-------------DPRLPG----NGYEKKMLHVLKIAYICTLHDPEERPNSQYVRC 481 (487)
Q Consensus 431 ~~~~--~~~~~~~~-------------~~~~~~----~~~~~~~~~l~~li~~cl~~~P~~RPs~~~il~ 481 (487)
.+.. ........ .+.... .........+.+++.+||+.||.+|||+++++.
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~eil~ 285 (301)
T cd07873 216 FIFRILGTPTEETWPGILSNEEFKSYNYPKYRADCLHNHAPRLDSDGAELLSKLLQFEGRKRISAEEAMK 285 (301)
T ss_pred HHHHHcCCCChhhchhhhccccccccccCccccccHHhhcCCCCHHHHHHHHHHhcCCcccCcCHHHHhc
Confidence 1110 00000000 000000 001123456789999999999999999999985
No 239
>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is
Probab=100.00 E-value=1.2e-37 Score=309.22 Aligned_cols=256 Identities=25% Similarity=0.369 Sum_probs=191.9
Q ss_pred cccccccccccccceeEEEEEecCCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCCCCccccc
Q 011360 192 DCFASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQIRHRNILPLL 271 (487)
Q Consensus 192 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~ 271 (487)
+.|.+.+.||.|+||.||+|.. ..++..||+|++... .........+.+|+.+++.++||||++++
T Consensus 15 ~~y~~~~~lg~G~~g~V~~~~~-~~~~~~vavK~~~~~-------------~~~~~~~~~~~~E~~~l~~l~h~~iv~~~ 80 (343)
T cd07878 15 ERYQNLTPVGSGAYGSVCSAYD-TRLRQKVAVKKLSRP-------------FQSLIHARRTYRELRLLKHMKHENVIGLL 80 (343)
T ss_pred hhhhhheecccCCCeEEEEEEE-CCCCCEEEEEEeCch-------------hhhhHHHHHHHHHHHHHHhcCCCchhhhh
Confidence 5699999999999999999974 457889999987321 11122345567899999999999999999
Q ss_pred eEEecC------CeeEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEe
Q 011360 272 AHMVRP------DCHLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVLL 345 (487)
Q Consensus 272 ~~~~~~------~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nill 345 (487)
+++... ...|++|+++ +++|.+++. ...+++..+..++.|++.||.|| |++||+||||||+||++
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~~~-----~~~l~~~~~~~i~~qi~~aL~~L---H~~~ivHrdikp~Nil~ 151 (343)
T cd07878 81 DVFTPATSIENFNEVYLVTNLM-GADLNNIVK-----CQKLSDEHVQFLIYQLLRGLKYI---HSAGIIHRDLKPSNVAV 151 (343)
T ss_pred hhhcccccccccCcEEEEeecC-CCCHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHH---HHCCeecccCChhhEEE
Confidence 987543 3468999998 889988775 34689999999999999999999 77889999999999999
Q ss_pred CCCCCEEEeccCCccccCCCCceeeEeeecccccccCCcccCC-CCCCchhHHHHHHHHHHHHHhCCCCccccCCCCccc
Q 011360 346 NDDMEACISDLGLAMAIPDGYTRVLISYVLGTMAYIAPEYFQQ-PELSEKCDIFSFGMLLISLVRGVPSFVFHQNGEEIC 424 (487)
Q Consensus 346 ~~~~~~kl~DFg~s~~~~~~~~~~~~~~~~gt~~y~aPE~l~~-~~~~~~~DvwslG~~l~elltg~~pf~~~~~~~~~~ 424 (487)
+.++.+||+|||++....... ....||+.|+|||++.+ ..++.++|||||||++|+|++|..||......
T Consensus 152 ~~~~~~kl~Dfg~~~~~~~~~-----~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~---- 222 (343)
T cd07878 152 NEDCELRILDFGLARQADDEM-----TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLKGKALFPGNDYI---- 222 (343)
T ss_pred CCCCCEEEcCCccceecCCCc-----CCccccccccCchHhcCCccCCchhhhHhHHHHHHHHHHCCCCCCCCCHH----
Confidence 999999999999998654332 23468999999999876 57899999999999999999999999543210
Q ss_pred cHHHHHHHHhc-CCCC-Ccc--------------CCCCCCCC----cHHHHHHHHHHHhhccCCCCCCCCChHHHHH
Q 011360 425 SPEWLRKVMNS-KNPS-RAI--------------DPRLPGNG----YEKKMLHVLKIAYICTLHDPEERPNSQYVRC 481 (487)
Q Consensus 425 ~~~~~~~~~~~-~~~~-~~~--------------~~~~~~~~----~~~~~~~l~~li~~cl~~~P~~RPs~~~il~ 481 (487)
..+..+... +.+. ..+ -+..+... .......+.+++.+||+.||++|||+.++++
T Consensus 223 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dp~~R~s~~ell~ 297 (343)
T cd07878 223 --DQLKRIMEVVGTPSPEVLKKISSEHARKYIQSLPHMPQQDLKKIFRGANPLAIDLLEKMLVLDSDKRISASEALA 297 (343)
T ss_pred --HHHHHHHHHhCCCCHHHHHhcchhhHHHHhhccccccchhHHHhccCCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 111111000 0000 000 00000000 0011234779999999999999999999884
No 240
>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw
Probab=100.00 E-value=1.8e-37 Score=306.51 Aligned_cols=257 Identities=21% Similarity=0.268 Sum_probs=195.8
Q ss_pred ccccccccccccceeEEEEEecCCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCCCCccccce
Q 011360 193 CFASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQIRHRNILPLLA 272 (487)
Q Consensus 193 ~~~~~~~lg~G~~g~v~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~ 272 (487)
+|.+.+.||+|+||.||++... .+++.+|+|.+.. ...........+..|..++..++||||+++++
T Consensus 2 ~y~~~~~lG~G~fg~V~~~~~~-~~~~~~aiK~~~~------------~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~ 68 (332)
T cd05623 2 DFEILKVIGRGAFGEVAVVKLK-NADKVFAMKILNK------------WEMLKRAETACFREERDVLVNGDNQWITTLHY 68 (332)
T ss_pred CceEEEEEEeCCCeEEEEEEEC-CCCCEEEEEEEeH------------HHHHHhhHHHHHHHHHHHHhhCCCCCEeeEEE
Confidence 5889999999999999999764 5788999998732 11122233455778899999999999999999
Q ss_pred EEecCCeeEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCCEE
Q 011360 273 HMVRPDCHLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVLLNDDMEAC 352 (487)
Q Consensus 273 ~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nill~~~~~~k 352 (487)
++.+.+..|+||||+++|+|.+++.. ....+++..+..++.|++.||.|| |++||+||||||+|||++.++.+|
T Consensus 69 ~~~~~~~~~lv~ey~~~g~L~~~l~~---~~~~l~~~~~~~~~~qi~~al~~l---H~~~iiHrDlkp~Nili~~~~~~k 142 (332)
T cd05623 69 AFQDENNLYLVMDYYVGGDLLTLLSK---FEDRLPEDMARFYLAEMVIAIDSV---HQLHYVHRDIKPDNILMDMNGHIR 142 (332)
T ss_pred EEecCCEEEEEEeccCCCcHHHHHHH---hcCCCCHHHHHHHHHHHHHHHHHH---HHCCeEecCCCHHHEEECCCCCEE
Confidence 99999999999999999999999974 235688999999999999999999 678899999999999999999999
Q ss_pred EeccCCccccCCCCceeeEeeecccccccCCcccC-----CCCCCchhHHHHHHHHHHHHHhCCCCccccCCCCccccHH
Q 011360 353 ISDLGLAMAIPDGYTRVLISYVLGTMAYIAPEYFQ-----QPELSEKCDIFSFGMLLISLVRGVPSFVFHQNGEEICSPE 427 (487)
Q Consensus 353 l~DFg~s~~~~~~~~~~~~~~~~gt~~y~aPE~l~-----~~~~~~~~DvwslG~~l~elltg~~pf~~~~~~~~~~~~~ 427 (487)
|+|||++......... ......||+.|+|||++. ...++.++|||||||++|||++|..||.... ..+
T Consensus 143 L~DfG~a~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwSlGvil~ell~g~~Pf~~~~------~~~ 215 (332)
T cd05623 143 LADFGSCLKLMEDGTV-QSSVAVGTPDYISPEILQAMEDGKGKYGPECDWWSLGVCMYEMLYGETPFYAES------LVE 215 (332)
T ss_pred EeecchheecccCCcc-eecccccCccccCHHHHhccccCCCCCCCcCCEEeeHHHHHHHhcCCCCCCCCC------HHH
Confidence 9999998765332221 123356999999999986 3468899999999999999999999994322 222
Q ss_pred HHHHHHhcCCCCCccCCCCCCCCcHHHHHHHHHHHhhccCCCCCC--CCChHHHHH
Q 011360 428 WLRKVMNSKNPSRAIDPRLPGNGYEKKMLHVLKIAYICTLHDPEE--RPNSQYVRC 481 (487)
Q Consensus 428 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~--RPs~~~il~ 481 (487)
.......... ... ++.. ....+.++.+++.+|+..+|++ ||++.++++
T Consensus 216 ~~~~i~~~~~-~~~----~p~~-~~~~s~~~~~li~~ll~~~~~r~~r~~~~~~~~ 265 (332)
T cd05623 216 TYGKIMNHKE-RFQ----FPAQ-VTDVSEDAKDLIRRLICSREHRLGQNGIEDFKQ 265 (332)
T ss_pred HHHHHhCCCc-ccc----CCCc-cccCCHHHHHHHHHHccChhhhcCCCCHHHHhC
Confidence 3333332211 111 1111 1123356788888888665544 688888865
No 241
>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=2.6e-37 Score=298.74 Aligned_cols=254 Identities=22% Similarity=0.373 Sum_probs=198.2
Q ss_pred ccccccccccccceeEEEEEecCCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCCCCccccce
Q 011360 193 CFASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQIRHRNILPLLA 272 (487)
Q Consensus 193 ~~~~~~~lg~G~~g~v~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~ 272 (487)
+|++.+.||.|+||.||++... .++..||+|.+.. .........+.+|+.++.+++||||+++++
T Consensus 2 ~~~~~~~ig~g~~g~v~~~~~~-~~~~~~a~k~~~~--------------~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~ 66 (286)
T cd06622 2 EIEVLDELGKGNYGSVYKVLHR-PTGVTMAMKEIRL--------------ELDESKFNQIIMELDILHKAVSPYIVDFYG 66 (286)
T ss_pred hhhhhhhhcccCCeEEEEEEEc-CCCcEEEEEEeec--------------ccCHHHHHHHHHHHHHHHhcCCCcHHhhhh
Confidence 5889999999999999999754 5789999998732 112234467888999999999999999999
Q ss_pred EEecCCeeEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCCEE
Q 011360 273 HMVRPDCHLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVLLNDDMEAC 352 (487)
Q Consensus 273 ~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nill~~~~~~k 352 (487)
.+...+..|+||||+++++|..++... .....+++..+..++.|++.||.||| ++.|++|+||+|+||+++.++.++
T Consensus 67 ~~~~~~~~~lv~e~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~~~i~~~l~~LH--~~~~i~H~dl~p~nil~~~~~~~~ 143 (286)
T cd06622 67 AFFIEGAVYMCMEYMDAGSLDKLYAGG-VATEGIPEDVLRRITYAVVKGLKFLK--EEHNIIHRDVKPTNVLVNGNGQVK 143 (286)
T ss_pred heecCCeEEEEEeecCCCCHHHHHHhc-cccCCCCHHHHHHHHHHHHHHHHHHH--hcCCEeeCCCCHHHEEECCCCCEE
Confidence 999999999999999999999988642 12347899999999999999999995 245899999999999999999999
Q ss_pred EeccCCccccCCCCceeeEeeecccccccCCcccCCC------CCCchhHHHHHHHHHHHHHhCCCCccccCCCCccccH
Q 011360 353 ISDLGLAMAIPDGYTRVLISYVLGTMAYIAPEYFQQP------ELSEKCDIFSFGMLLISLVRGVPSFVFHQNGEEICSP 426 (487)
Q Consensus 353 l~DFg~s~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~------~~~~~~DvwslG~~l~elltg~~pf~~~~~~~~~~~~ 426 (487)
|+|||++........ ....+++.|+|||.+.+. .++.++|+|||||++|+|++|..||....... ..
T Consensus 144 l~dfg~~~~~~~~~~----~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~---~~ 216 (286)
T cd06622 144 LCDFGVSGNLVASLA----KTNIGCQSYMAPERIKSGGPNQNPTYTVQSDVWSLGLSILEMALGRYPYPPETYAN---IF 216 (286)
T ss_pred EeecCCcccccCCcc----ccCCCccCccCcchhcCCCCCccCCCCcccchHhHHHHHHHHHhCCCCCCCcchhh---HH
Confidence 999999876543322 234578899999998543 35889999999999999999999994332111 11
Q ss_pred HHHHHHHhcCCCCCccCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCChHHHHH
Q 011360 427 EWLRKVMNSKNPSRAIDPRLPGNGYEKKMLHVLKIAYICTLHDPEERPNSQYVRC 481 (487)
Q Consensus 427 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~~il~ 481 (487)
....... ...+. .++ .....++.+++.+||+.+|++||++.+++.
T Consensus 217 ~~~~~~~-~~~~~-----~~~----~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~ 261 (286)
T cd06622 217 AQLSAIV-DGDPP-----TLP----SGYSDDAQDFVAKCLNKIPNRRPTYAQLLE 261 (286)
T ss_pred HHHHHHh-hcCCC-----CCC----cccCHHHHHHHHHHcccCcccCCCHHHHhc
Confidence 1111111 11111 111 123466889999999999999999999876
No 242
>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.
Probab=100.00 E-value=1.2e-37 Score=307.46 Aligned_cols=258 Identities=20% Similarity=0.260 Sum_probs=196.9
Q ss_pred cccccccccccccceeEEEEEecCCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCCCCccccc
Q 011360 192 DCFASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQIRHRNILPLL 271 (487)
Q Consensus 192 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~ 271 (487)
++|.+.+.||+|+||.||+++. ..+++.||+|.+.. ...........+.+|..++..+.||||++++
T Consensus 1 d~y~i~~~lG~G~fg~V~~~~~-~~~~~~~aiK~~~~------------~~~~~~~~~~~~~~e~~~l~~~~~~~i~~l~ 67 (331)
T cd05624 1 DDFEIIKVIGRGAFGEVAVVKM-KHTERIYAMKILNK------------WEMLKRAETACFREERNVLVNGDCQWITTLH 67 (331)
T ss_pred CCceEEEEEeeCCCeEEEEEEE-CCCCCEEEEEEEeH------------HHHHhhHHHHHHHHHHHHHHhCCCCCEeeEE
Confidence 3689999999999999999975 45788999998732 0112233445677889999999999999999
Q ss_pred eEEecCCeeEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCCE
Q 011360 272 AHMVRPDCHLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVLLNDDMEA 351 (487)
Q Consensus 272 ~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nill~~~~~~ 351 (487)
+++...+..|+||||++||+|.+++... ...+++..+..++.|++.||.|| |++||+||||||+|||++.++.+
T Consensus 68 ~~~~~~~~~~lv~Ey~~gg~L~~~l~~~---~~~l~~~~~~~~~~qi~~~L~~l---H~~~iiHrDlkp~Nill~~~~~~ 141 (331)
T cd05624 68 YAFQDENYLYLVMDYYVGGDLLTLLSKF---EDRLPEDMARFYIAEMVLAIHSI---HQLHYVHRDIKPDNVLLDMNGHI 141 (331)
T ss_pred EEEEcCCEEEEEEeCCCCCcHHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHH---HHCCeeeccCchHHEEEcCCCCE
Confidence 9999999999999999999999999742 35688999999999999999999 77889999999999999999999
Q ss_pred EEeccCCccccCCCCceeeEeeecccccccCCcccCC-----CCCCchhHHHHHHHHHHHHHhCCCCccccCCCCccccH
Q 011360 352 CISDLGLAMAIPDGYTRVLISYVLGTMAYIAPEYFQQ-----PELSEKCDIFSFGMLLISLVRGVPSFVFHQNGEEICSP 426 (487)
Q Consensus 352 kl~DFg~s~~~~~~~~~~~~~~~~gt~~y~aPE~l~~-----~~~~~~~DvwslG~~l~elltg~~pf~~~~~~~~~~~~ 426 (487)
||+|||++......... ......||+.|+|||++.+ ..++.++||||||+++|+|++|..||.... ..
T Consensus 142 kl~DfG~a~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~------~~ 214 (331)
T cd05624 142 RLADFGSCLKMNQDGTV-QSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAES------LV 214 (331)
T ss_pred EEEeccceeeccCCCce-eeccccCCcccCCHHHHhccccCCCCCCCcccEEeeehhhhhhhhCCCCccCCC------HH
Confidence 99999998766443221 1133569999999999875 467899999999999999999999994322 12
Q ss_pred HHHHHHHhcCCCCCccCCCCCCCCcHHHHHHHHHHHhhccCCCCCC--CCChHHHHH
Q 011360 427 EWLRKVMNSKNPSRAIDPRLPGNGYEKKMLHVLKIAYICTLHDPEE--RPNSQYVRC 481 (487)
Q Consensus 427 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~--RPs~~~il~ 481 (487)
+.......... ...++..+ ...+..+.+++.+|+...+++ |++++++++
T Consensus 215 ~~~~~i~~~~~-~~~~p~~~-----~~~~~~~~~li~~ll~~~~~~~~~~~~~~~~~ 265 (331)
T cd05624 215 ETYGKIMNHEE-RFQFPSHI-----TDVSEEAKDLIQRLICSRERRLGQNGIEDFKK 265 (331)
T ss_pred HHHHHHHcCCC-cccCCCcc-----ccCCHHHHHHHHHHccCchhhcCCCCHHHHhc
Confidence 22232322111 11111111 123456888899999866544 457777764
No 243
>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k
Probab=100.00 E-value=5.3e-37 Score=290.67 Aligned_cols=250 Identities=26% Similarity=0.360 Sum_probs=195.8
Q ss_pred cccccccceeEEEEEecCCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCCCCccccceEEecC
Q 011360 198 EKIGSGGCGEVYKAELPGSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQIRHRNILPLLAHMVRP 277 (487)
Q Consensus 198 ~~lg~G~~g~v~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~ 277 (487)
+.||.|+||.||++... .++.||+|.+.... .......+..|+.+++++.||||+++++++...
T Consensus 1 ~~lg~g~~g~v~~~~~~--~~~~v~~K~~~~~~--------------~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~ 64 (251)
T cd05041 1 EKIGKGNFGDVYKGVLK--GNTEVAVKTCRSTL--------------PPDLKRKFLQEAEILKQYDHPNIVKLIGVCVQK 64 (251)
T ss_pred CccccCCCceEEEEEEe--CCCcEEEEeccccC--------------CHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecC
Confidence 46899999999999764 38899999874311 112445788899999999999999999999999
Q ss_pred CeeEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCCEEEeccC
Q 011360 278 DCHLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVLLNDDMEACISDLG 357 (487)
Q Consensus 278 ~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nill~~~~~~kl~DFg 357 (487)
...++||||+++++|.+++.. ....+++..+..++.+++.||.|| |++|++||||+|+||+++.++.++|+|||
T Consensus 65 ~~~~~v~e~~~~~~l~~~l~~---~~~~~~~~~~~~~~~~~~~~l~~l---H~~~i~h~di~p~nili~~~~~~~l~d~g 138 (251)
T cd05041 65 QPIYIVMELVPGGSLLTFLRK---KKNRLTVKKLLQMSLDAAAGMEYL---ESKNCIHRDLAARNCLVGENNVLKISDFG 138 (251)
T ss_pred CCeEEEEEcCCCCcHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHH---HhCCEehhhcCcceEEEcCCCcEEEeecc
Confidence 999999999999999999864 234678889999999999999999 77889999999999999999999999999
Q ss_pred CccccCCCCceeeEeeecccccccCCcccCCCCCCchhHHHHHHHHHHHHHh-CCCCccccCCCCccccHHHHHHHHhcC
Q 011360 358 LAMAIPDGYTRVLISYVLGTMAYIAPEYFQQPELSEKCDIFSFGMLLISLVR-GVPSFVFHQNGEEICSPEWLRKVMNSK 436 (487)
Q Consensus 358 ~s~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DvwslG~~l~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~ 436 (487)
++................++..|+|||.+.++.++.++|+||||+++|+|+| |..||..... ..........
T Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~i~~~l~t~~~~p~~~~~~-------~~~~~~~~~~ 211 (251)
T cd05041 139 MSREEEGGIYTVSDGLKQIPIKWTAPEALNYGRYTSESDVWSYGILLWETFSLGDTPYPGMSN-------QQTRERIESG 211 (251)
T ss_pred ccccccCCcceeccccCcceeccCChHhhccCCCCcchhHHHHHHHHHHHHhccCCCCccCCH-------HHHHHHHhcC
Confidence 9876543222211112234667999999988889999999999999999999 7888843322 1112222211
Q ss_pred CCCCccCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCChHHHHHHHhh
Q 011360 437 NPSRAIDPRLPGNGYEKKMLHVLKIAYICTLHDPEERPNSQYVRCRLSQ 485 (487)
Q Consensus 437 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~~il~~L~~ 485 (487)
. ....+ ...+..+.+++.+||..+|++|||+.++++.|+.
T Consensus 212 ~-~~~~~--------~~~~~~~~~li~~~l~~~p~~Rp~~~ell~~l~~ 251 (251)
T cd05041 212 Y-RMPAP--------QLCPEEIYRLMLQCWAYDPENRPSFSEIYNELQI 251 (251)
T ss_pred C-CCCCC--------ccCCHHHHHHHHHHhccChhhCcCHHHHHHHhhC
Confidence 1 11111 1123568999999999999999999999998863
No 244
>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2
Probab=100.00 E-value=6.4e-38 Score=302.75 Aligned_cols=261 Identities=22% Similarity=0.323 Sum_probs=194.3
Q ss_pred cccccccccccceeEEEEEecCCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCCCCccccceE
Q 011360 194 FASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQIRHRNILPLLAH 273 (487)
Q Consensus 194 ~~~~~~lg~G~~g~v~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~ 273 (487)
|.+.+.||.|++|.||+|+. ..++..||+|++... .........+.+|+.+++.++||||++++++
T Consensus 2 y~~~~~l~~g~~~~v~~~~~-~~~~~~~~ik~~~~~-------------~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~ 67 (285)
T cd07861 2 YTKIEKIGEGTYGVVYKGRN-KKTGQIVAMKKIRLE-------------SEEEGVPSTAIREISLLKELQHPNIVCLQDV 67 (285)
T ss_pred ceEeeEecccCceEEEEEEE-CCCCcEEEEEEeccc-------------cccCCchHHHHHHHHHHHhcCCCCEeeeEEE
Confidence 78889999999999999975 457889999987431 1112223456789999999999999999999
Q ss_pred EecCCeeEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCCEEE
Q 011360 274 MVRPDCHLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVLLNDDMEACI 353 (487)
Q Consensus 274 ~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nill~~~~~~kl 353 (487)
+..++..|+||||++ ++|.+++.... .+..+++..+..++.|++.||.|| |++|++||||+|+||+++.++.++|
T Consensus 68 ~~~~~~~~~v~e~~~-~~l~~~~~~~~-~~~~~~~~~~~~~~~qi~~~L~~l---H~~~i~H~dl~p~nil~~~~~~~~l 142 (285)
T cd07861 68 LMQESRLYLIFEFLS-MDLKKYLDSLP-KGQYMDAELVKSYLYQILQGILFC---HSRRVLHRDLKPQNLLIDNKGVIKL 142 (285)
T ss_pred EeeCCeEEEEEecCC-CCHHHHHhcCC-CCCcCCHHHHHHHHHHHHHHHHHH---HhCCeeecCCCHHHEEEcCCCcEEE
Confidence 999999999999996 68988886532 235689999999999999999999 7788999999999999999999999
Q ss_pred eccCCccccCCCCceeeEeeecccccccCCcccCCC-CCCchhHHHHHHHHHHHHHhCCCCccccCCCCccccHHHHHHH
Q 011360 354 SDLGLAMAIPDGYTRVLISYVLGTMAYIAPEYFQQP-ELSEKCDIFSFGMLLISLVRGVPSFVFHQNGEEICSPEWLRKV 432 (487)
Q Consensus 354 ~DFg~s~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~-~~~~~~DvwslG~~l~elltg~~pf~~~~~~~~~~~~~~~~~~ 432 (487)
+|||++......... .....+++.|+|||++.+. .++.++||||||+++|+|+||.+||...... ......
T Consensus 143 ~dfg~~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~~~~~~~~~------~~~~~~ 214 (285)
T cd07861 143 ADFGLARAFGIPVRV--YTHEVVTLWYRAPEVLLGSPRYSTPVDIWSIGTIFAEMATKKPLFHGDSEI------DQLFRI 214 (285)
T ss_pred CcccceeecCCCccc--ccCCcccccccChHHhcCCCCcCcHHHHHHHHHHHHHHHHCCCCCCCCCHH------HHHHHH
Confidence 999998765332211 1223568899999988654 5789999999999999999999999543211 000000
Q ss_pred Hhc-CCC--------------CCccCC---CCCCCCcHHHHHHHHHHHhhccCCCCCCCCChHHHHH
Q 011360 433 MNS-KNP--------------SRAIDP---RLPGNGYEKKMLHVLKIAYICTLHDPEERPNSQYVRC 481 (487)
Q Consensus 433 ~~~-~~~--------------~~~~~~---~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~~il~ 481 (487)
... ..+ ....+. ..........+.++.+++.+||+.||++|||+.+|+.
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~~ll~ 281 (285)
T cd07861 215 FRILGTPTEDVWPGVTSLPDYKNTFPKWKKGSLRSAVKNLDEDGLDLLEKMLIYDPAKRISAKKALN 281 (285)
T ss_pred HHHhCCCChhhhhcchhhHHHHhhccccCcchhHHhcCCCCHHHHHHHHHHhcCChhhCCCHHHHhc
Confidence 000 000 000000 0000001113456789999999999999999999874
No 245
>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate
Probab=100.00 E-value=5.5e-37 Score=293.31 Aligned_cols=258 Identities=24% Similarity=0.375 Sum_probs=200.7
Q ss_pred cccccccccccceeEEEEEecCCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCCCCccccceE
Q 011360 194 FASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQIRHRNILPLLAH 273 (487)
Q Consensus 194 ~~~~~~lg~G~~g~v~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~ 273 (487)
|.+...||.|++|.||+|.. ..++..+|+|.+......... ..........+.+|+.++++++||||++++++
T Consensus 2 ~~~~~~ig~g~~~~v~~a~~-~~~~~~~~~k~~~~~~~~~~~------~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~ 74 (267)
T cd06628 2 WIKGALIGSGSFGSVYLGMN-ASSGELMAVKQVELPSVSASS------KDRKRSMLDALAREIALLKELQHENIVQYLGS 74 (267)
T ss_pred ccccceeecCCCeEEEEEEe-cCCCcEEEEEEecCCCcccch------hHHHHHHHHHHHHHHHHHHhcCCCCeeeEEEE
Confidence 66778999999999999974 457889999987543221110 11223345678899999999999999999999
Q ss_pred EecCCeeEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCCEEE
Q 011360 274 MVRPDCHLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVLLNDDMEACI 353 (487)
Q Consensus 274 ~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nill~~~~~~kl 353 (487)
+...+..+++|||+++++|.+++.. ...+++..+..++.|++.||.|| |+.|++||||+|+||++++++.++|
T Consensus 75 ~~~~~~~~lv~e~~~~~~L~~~l~~----~~~l~~~~~~~~~~~l~~~l~~l---H~~~ivH~di~p~nil~~~~~~~~l 147 (267)
T cd06628 75 SLDADHLNIFLEYVPGGSVAALLNN----YGAFEETLVRNFVRQILKGLNYL---HNRGIIHRDIKGANILVDNKGGIKI 147 (267)
T ss_pred EEeCCccEEEEEecCCCCHHHHHHh----ccCccHHHHHHHHHHHHHHHHHH---HhcCcccccCCHHHEEEcCCCCEEe
Confidence 9999999999999999999999965 35688889999999999999999 6778999999999999999999999
Q ss_pred eccCCccccCCCCce----eeEeeecccccccCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCccccCCCCccccHHHH
Q 011360 354 SDLGLAMAIPDGYTR----VLISYVLGTMAYIAPEYFQQPELSEKCDIFSFGMLLISLVRGVPSFVFHQNGEEICSPEWL 429 (487)
Q Consensus 354 ~DFg~s~~~~~~~~~----~~~~~~~gt~~y~aPE~l~~~~~~~~~DvwslG~~l~elltg~~pf~~~~~~~~~~~~~~~ 429 (487)
+|||.+......... .......|+..|+|||.+.+..++.++|+||||+++|+|++|..||..... ....
T Consensus 148 ~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~------~~~~ 221 (267)
T cd06628 148 SDFGISKKLEANSLSTKTNGARPSLQGSVFWMAPEVVKQTSYTRKADIWSLGCLVVEMLTGKHPFPDCTQ------LQAI 221 (267)
T ss_pred cccCCCcccccccccCCccccccccCCCcCccChhHhccCCCCchhhhHHHHHHHHHHhhCCCCCCCccH------HHHH
Confidence 999998876532111 111234578899999999988899999999999999999999999953221 1111
Q ss_pred HHHHhcCCCCCccCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCChHHHHH
Q 011360 430 RKVMNSKNPSRAIDPRLPGNGYEKKMLHVLKIAYICTLHDPEERPNSQYVRC 481 (487)
Q Consensus 430 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~~il~ 481 (487)
....... .+.++. ..+..+.+++.+||+.+|++||++.+|++
T Consensus 222 ~~~~~~~------~~~~~~----~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 263 (267)
T cd06628 222 FKIGENA------SPEIPS----NISSEAIDFLEKTFEIDHNKRPTAAELLK 263 (267)
T ss_pred HHHhccC------CCcCCc----ccCHHHHHHHHHHccCCchhCcCHHHHhh
Confidence 1111111 111221 22356889999999999999999999875
No 246
>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4. Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin
Probab=100.00 E-value=2.8e-37 Score=301.18 Aligned_cols=258 Identities=20% Similarity=0.324 Sum_probs=197.7
Q ss_pred ccccccccccccccceeEEEEEecCCCCc----eEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCCCC
Q 011360 191 EDCFASLEKIGSGGCGEVYKAELPGSNGK----MIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQIRHRN 266 (487)
Q Consensus 191 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~----~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpn 266 (487)
.++|...+.||.|+||.||+|.+.. ++. .+|+|.+.. .........+.+|+.+++.++|||
T Consensus 6 ~~~~~~~~~lg~G~~g~vy~~~~~~-~~~~~~~~vaiK~~~~--------------~~~~~~~~~~~~e~~~~~~l~h~n 70 (303)
T cd05110 6 ETELKRVKVLGSGAFGTVYKGIWVP-EGETVKIPVAIKILNE--------------TTGPKANVEFMDEALIMASMDHPH 70 (303)
T ss_pred hhhceeccccccCCCccEEEEEEec-CCCcceeeEEEEeccc--------------cCCHHHHHHHHHHHHHHHhCCCCC
Confidence 3468899999999999999997642 343 578887632 111223345788999999999999
Q ss_pred ccccceEEecCCeeEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeC
Q 011360 267 ILPLLAHMVRPDCHLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVLLN 346 (487)
Q Consensus 267 Iv~l~~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nill~ 346 (487)
|+++++++... ..++++||+++|+|.+++.. ....+++..+..++.|++.||.|| |++||+||||||+||+++
T Consensus 71 iv~~~~~~~~~-~~~~v~e~~~~g~l~~~~~~---~~~~~~~~~~~~~~~qi~~~L~~L---H~~~ivH~dikp~Nill~ 143 (303)
T cd05110 71 LVRLLGVCLSP-TIQLVTQLMPHGCLLDYVHE---HKDNIGSQLLLNWCVQIAKGMMYL---EERRLVHRDLAARNVLVK 143 (303)
T ss_pred cccEEEEEcCC-CceeeehhcCCCCHHHHHHh---cccCCCHHHHHHHHHHHHHHHHHH---hhcCeeccccccceeeec
Confidence 99999988754 46799999999999999864 234688899999999999999999 778899999999999999
Q ss_pred CCCCEEEeccCCccccCCCCceeeEeeecccccccCCcccCCCCCCchhHHHHHHHHHHHHHh-CCCCccccCCCCcccc
Q 011360 347 DDMEACISDLGLAMAIPDGYTRVLISYVLGTMAYIAPEYFQQPELSEKCDIFSFGMLLISLVR-GVPSFVFHQNGEEICS 425 (487)
Q Consensus 347 ~~~~~kl~DFg~s~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DvwslG~~l~ellt-g~~pf~~~~~~~~~~~ 425 (487)
.++.+||+|||+++...............++..|+|||.+.+..++.++||||||+++||+++ |..||....
T Consensus 144 ~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DiwslG~~l~el~t~g~~p~~~~~------- 216 (303)
T cd05110 144 SPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIP------- 216 (303)
T ss_pred CCCceEEccccccccccCcccccccCCCccccccCCHHHhccCCCChHHHHHHHHHHHHHHHhCCCCCCCCCC-------
Confidence 999999999999987644322211222345778999999998899999999999999999997 889984321
Q ss_pred HHHHHHHHhcCCCCCccCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCChHHHHHHHhhh
Q 011360 426 PEWLRKVMNSKNPSRAIDPRLPGNGYEKKMLHVLKIAYICTLHDPEERPNSQYVRCRLSQL 486 (487)
Q Consensus 426 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~~il~~L~~l 486 (487)
.............. . .+. ....++.+++..||..+|++||++.++++.|+.+
T Consensus 217 ~~~~~~~~~~~~~~-~----~~~----~~~~~~~~li~~c~~~~p~~Rp~~~~l~~~l~~~ 268 (303)
T cd05110 217 TREIPDLLEKGERL-P----QPP----ICTIDVYMVMVKCWMIDADSRPKFKELAAEFSRM 268 (303)
T ss_pred HHHHHHHHHCCCCC-C----CCC----CCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence 11122222222110 0 111 1224688999999999999999999999998864
No 247
>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a
Probab=100.00 E-value=5e-37 Score=299.70 Aligned_cols=258 Identities=20% Similarity=0.252 Sum_probs=199.1
Q ss_pred ccccccccccccceeEEEEEecCCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCCCCccccce
Q 011360 193 CFASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQIRHRNILPLLA 272 (487)
Q Consensus 193 ~~~~~~~lg~G~~g~v~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~ 272 (487)
+|.+.+.||.|+||.||++.. ..+++.|++|.+... ..........+.+|+.+++.++||||+++++
T Consensus 2 ~y~~~~~l~~g~~~~v~~~~~-~~~~~~v~ik~~~~~------------~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~ 68 (305)
T cd05609 2 DFETIKLISNGAYGAVYLVRH-KETRQRFAMKKINKQ------------NLILRNQIQQVFVERDILTFAENPFVVSMFC 68 (305)
T ss_pred CceEeeEeecCCCeeEEEEEE-CCCCcEEEEEEeehh------------hhhhHHHHHHHHHHHHHHHhCCCCCeeeeEE
Confidence 588899999999999999975 457889999987321 1112234456778999999999999999999
Q ss_pred EEecCCeeEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCCEE
Q 011360 273 HMVRPDCHLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVLLNDDMEAC 352 (487)
Q Consensus 273 ~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nill~~~~~~k 352 (487)
.+..++..++||||++|++|.+++.. ...+++..+..++.|++.||.|| |+.|++||||+|+||+++.++.++
T Consensus 69 ~~~~~~~~~lv~e~~~g~~L~~~l~~----~~~~~~~~~~~~~~~i~~~l~~l---H~~~i~H~dl~p~NIll~~~~~~~ 141 (305)
T cd05609 69 SFETKRHLCMVMEYVEGGDCATLLKN----IGALPVDMARMYFAETVLALEYL---HNYGIVHRDLKPDNLLITSMGHIK 141 (305)
T ss_pred EEecCCEEEEEEecCCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHH---HHCCccccCCchHHEEECCCCCEE
Confidence 99999999999999999999999964 35688999999999999999999 677899999999999999999999
Q ss_pred EeccCCccccCCCCc-------------eeeEeeecccccccCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCccccCC
Q 011360 353 ISDLGLAMAIPDGYT-------------RVLISYVLGTMAYIAPEYFQQPELSEKCDIFSFGMLLISLVRGVPSFVFHQN 419 (487)
Q Consensus 353 l~DFg~s~~~~~~~~-------------~~~~~~~~gt~~y~aPE~l~~~~~~~~~DvwslG~~l~elltg~~pf~~~~~ 419 (487)
|+|||+++....... ........++..|+|||.+.+..++.++|+||||+++|+|++|..||.+...
T Consensus 142 l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~pf~~~~~ 221 (305)
T cd05609 142 LTDFGLSKIGLMSLTTNLYEGHIEKDTREFLDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTP 221 (305)
T ss_pred EeeCCCccccCcCccccccccccccchhhccccCCccCccccCchhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH
Confidence 999998864211100 0001123578899999999888899999999999999999999999953322
Q ss_pred CCccccHHHHHHHHhcCCCCCccCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCChHHHHHHHh
Q 011360 420 GEEICSPEWLRKVMNSKNPSRAIDPRLPGNGYEKKMLHVLKIAYICTLHDPEERPNSQYVRCRLS 484 (487)
Q Consensus 420 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~~il~~L~ 484 (487)
.+...............+. ..+..+.+++.+||+.+|++|||+..+.+.|+
T Consensus 222 ------~~~~~~~~~~~~~~~~~~~--------~~~~~~~~li~~~l~~~P~~R~~~~~~~~ll~ 272 (305)
T cd05609 222 ------EELFGQVISDDIEWPEGDE--------ALPADAQDLISRLLRQNPLERLGTGGAFEVKQ 272 (305)
T ss_pred ------HHHHHHHHhcccCCCCccc--------cCCHHHHHHHHHHhccChhhccCccCHHHHHh
Confidence 2233333222211111111 22356889999999999999999766655554
No 248
>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of
Probab=100.00 E-value=4.8e-38 Score=310.36 Aligned_cols=244 Identities=20% Similarity=0.271 Sum_probs=184.9
Q ss_pred cccccceeEEEEEecCCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccC---CCCCccccceEEec
Q 011360 200 IGSGGCGEVYKAELPGSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQI---RHRNILPLLAHMVR 276 (487)
Q Consensus 200 lg~G~~g~v~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l---~hpnIv~l~~~~~~ 276 (487)
||.|+||.||+|+. ..+++.||+|++... .............|..++... .||||+++++++..
T Consensus 1 lG~G~~g~Vy~~~~-~~~~~~~avK~~~~~------------~~~~~~~~~~~~~e~~~l~~~~~~~~p~i~~~~~~~~~ 67 (330)
T cd05586 1 IGKGTFGQVYQVRK-KDTRRIYAMKVLSKK------------EIVAKKEVAHTIGERNILVRTLLDESPFIVGLKFSFQT 67 (330)
T ss_pred CCCCCceEEEEEEE-CCCCCEEEEEEEeHH------------HHhhhhHHHHHHHHHHHHHHhccCCCCcCcceEEEEec
Confidence 69999999999974 467899999987320 111112233444555555544 79999999999999
Q ss_pred CCeeEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCCEEEecc
Q 011360 277 PDCHLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVLLNDDMEACISDL 356 (487)
Q Consensus 277 ~~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nill~~~~~~kl~DF 356 (487)
.+..|+||||+++|+|.+++.. ...+++..+..++.||+.||+|| |++||+||||||+|||++.++.+||+||
T Consensus 68 ~~~~~lv~e~~~~g~L~~~l~~----~~~~~~~~~~~~~~qil~al~~L---H~~~ivHrDlkp~Nili~~~~~~kl~Df 140 (330)
T cd05586 68 DSDLYLVTDYMSGGELFWHLQK----EGRFSEDRAKFYIAELVLALEHL---HKYDIVYRDLKPENILLDATGHIALCDF 140 (330)
T ss_pred CCeEEEEEcCCCCChHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHH---HHCCeEeccCCHHHeEECCCCCEEEecC
Confidence 9999999999999999988864 45689999999999999999999 7788999999999999999999999999
Q ss_pred CCccccCCCCceeeEeeecccccccCCcccCCC-CCCchhHHHHHHHHHHHHHhCCCCccccCCCCccccHHHHHHHHhc
Q 011360 357 GLAMAIPDGYTRVLISYVLGTMAYIAPEYFQQP-ELSEKCDIFSFGMLLISLVRGVPSFVFHQNGEEICSPEWLRKVMNS 435 (487)
Q Consensus 357 g~s~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~-~~~~~~DvwslG~~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~ 435 (487)
|++......... .....||+.|+|||++.+. .++.++|||||||++|+|+||..||.... ..+........
T Consensus 141 g~a~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGvil~elltG~~Pf~~~~------~~~~~~~i~~~ 212 (330)
T cd05586 141 GLSKANLTDNKT--TNTFCGTTEYLAPEVLLDEKGYTKHVDFWSLGVLVFEMCCGWSPFYAED------TQQMYRNIAFG 212 (330)
T ss_pred CcCcCCCCCCCC--ccCccCCccccCHHHHcCCCCCCCccceeccccEEEEeccCCCCCCCCC------HHHHHHHHHcC
Confidence 998754322211 2345699999999998754 58999999999999999999999994322 12222222211
Q ss_pred CCCCCccCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCC----hHHHHH
Q 011360 436 KNPSRAIDPRLPGNGYEKKMLHVLKIAYICTLHDPEERPN----SQYVRC 481 (487)
Q Consensus 436 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs----~~~il~ 481 (487)
.. .++.. ..+..+.+++.+||+.||++||+ +.++++
T Consensus 213 -~~------~~~~~---~~~~~~~~li~~~L~~~P~~R~~~~~~~~~ll~ 252 (330)
T cd05586 213 -KV------RFPKN---VLSDEGRQFVKGLLNRNPQHRLGAHRDAVELKE 252 (330)
T ss_pred -CC------CCCCc---cCCHHHHHHHHHHcCCCHHHCCCCCCCHHHHhc
Confidence 11 11111 12346789999999999999994 555543
No 249
>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity
Probab=100.00 E-value=1.6e-37 Score=295.79 Aligned_cols=242 Identities=21% Similarity=0.342 Sum_probs=185.4
Q ss_pred cccccccceeEEEEEecCC------CCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCCCCccccc
Q 011360 198 EKIGSGGCGEVYKAELPGS------NGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQIRHRNILPLL 271 (487)
Q Consensus 198 ~~lg~G~~g~v~~~~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~ 271 (487)
+.||.|+||.||+|..... ....+++|.+. .........+..|+.+++.+.||||++++
T Consensus 1 ~~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~---------------~~~~~~~~~~~~e~~~l~~~~h~~iv~~~ 65 (258)
T cd05078 1 ESLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLD---------------KSHRNYSESFFEAASMMSQLSHKHLVLNY 65 (258)
T ss_pred CCCCcccchhheeeeecccccccccccchhhHHhhc---------------chhHHHHHHHHHHHHHHHhCCCCChhhee
Confidence 3689999999999975321 12346666541 11223445678899999999999999999
Q ss_pred eEEecCCeeEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCC-
Q 011360 272 AHMVRPDCHLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVLLNDDME- 350 (487)
Q Consensus 272 ~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nill~~~~~- 350 (487)
+++..++..++||||+++|+|.+++.. .+..+++..+..++.|++.||.|| |++||+||||||+||+++.++.
T Consensus 66 ~~~~~~~~~~lv~e~~~~g~L~~~l~~---~~~~~~~~~~~~~~~qi~~~l~~l---H~~~iiH~dlkp~nili~~~~~~ 139 (258)
T cd05078 66 GVCVCGDESIMVQEYVKFGSLDTYLKK---NKNLINISWKLEVAKQLAWALHFL---EDKGLTHGNVCAKNVLLIREEDR 139 (258)
T ss_pred eEEEeCCCcEEEEecCCCCcHHHHHhc---CCCCCCHHHHHHHHHHHHHHHHHH---HHCCeecCCCccceEEEeccccc
Confidence 999998999999999999999999864 234688999999999999999999 7788999999999999987765
Q ss_pred -------EEEeccCCccccCCCCceeeEeeecccccccCCcccCCC-CCCchhHHHHHHHHHHHHHhC-CCCccccCCCC
Q 011360 351 -------ACISDLGLAMAIPDGYTRVLISYVLGTMAYIAPEYFQQP-ELSEKCDIFSFGMLLISLVRG-VPSFVFHQNGE 421 (487)
Q Consensus 351 -------~kl~DFg~s~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~-~~~~~~DvwslG~~l~elltg-~~pf~~~~~~~ 421 (487)
++++|||.+...... ....+++.|+|||++.+. .++.++||||||+++|+|++| .+||.....
T Consensus 140 ~~~~~~~~~l~d~g~~~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~~~~~~~~~-- 211 (258)
T cd05078 140 KTGNPPFIKLSDPGISITVLPK------EILLERIPWVPPECIENPQNLSLAADKWSFGTTLWEIFSGGDKPLSALDS-- 211 (258)
T ss_pred ccCCCceEEecccccccccCCc------hhccccCCccCchhccCCCCCCchhhHHHHHHHHHHHHcCCCCChhhccH--
Confidence 699999998655332 234578899999999864 589999999999999999999 466632211
Q ss_pred ccccHHHHHHHHhcCCCCCccCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCChHHHHHHHh
Q 011360 422 EICSPEWLRKVMNSKNPSRAIDPRLPGNGYEKKMLHVLKIAYICTLHDPEERPNSQYVRCRLS 484 (487)
Q Consensus 422 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~~il~~L~ 484 (487)
... ...... .. .++.. ...++.+++.+||+.+|++|||+++|++.|+
T Consensus 212 ----~~~-~~~~~~-~~------~~~~~----~~~~~~~li~~~l~~~p~~Rps~~~il~~l~ 258 (258)
T cd05078 212 ----QKK-LQFYED-RH------QLPAP----KWTELANLINQCMDYEPDFRPSFRAIIRDLN 258 (258)
T ss_pred ----HHH-HHHHHc-cc------cCCCC----CcHHHHHHHHHHhccChhhCCCHHHHHHhcC
Confidence 111 111111 11 11211 1245889999999999999999999999874
No 250
>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3. Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac
Probab=100.00 E-value=4.3e-37 Score=295.02 Aligned_cols=261 Identities=23% Similarity=0.388 Sum_probs=199.2
Q ss_pred cccccccccccceeEEEEEecC--CCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCCCCccccc
Q 011360 194 FASLEKIGSGGCGEVYKAELPG--SNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQIRHRNILPLL 271 (487)
Q Consensus 194 ~~~~~~lg~G~~g~v~~~~~~~--~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~ 271 (487)
|.+.+.||+|+||.||+|.+.. .++..||+|.+.. ........+.+.+|+.+++.++||||++++
T Consensus 1 ~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~-------------~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~ 67 (273)
T cd05074 1 FTLGRMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKA-------------DIFSSSDIEEFLREAACMKEFDHPNVIKLI 67 (273)
T ss_pred CcchhcccCCCCCCEEeeEeeccCCCceEEEEEEecc-------------ccCChHHHHHHHHHHHHHhcCCCCCcceEE
Confidence 4567889999999999997643 3578999998732 112233456788899999999999999999
Q ss_pred eEEecCC------eeEEEEEecCCCCHHHHHhhhh--cCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCE
Q 011360 272 AHMVRPD------CHLLVYEFMKNGSLQDILDDVS--RGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNV 343 (487)
Q Consensus 272 ~~~~~~~------~~~lv~E~~~~gsL~~~l~~~~--~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Ni 343 (487)
+++.... ..+++++|+.+|+|.+++.... .....+++..+..++.|++.||+|| |+.||+||||||+||
T Consensus 68 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~l---H~~~i~H~dikp~ni 144 (273)
T cd05074 68 GVSLRSRAKGRLPIPMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEYL---SSKNFIHRDLAARNC 144 (273)
T ss_pred EEEccCCCCCcccceEEEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHH---HhCCEeecccchhhE
Confidence 9886532 2478999999999998875321 1223578889999999999999999 678899999999999
Q ss_pred EeCCCCCEEEeccCCccccCCCCceeeEeeecccccccCCcccCCCCCCchhHHHHHHHHHHHHHh-CCCCccccCCCCc
Q 011360 344 LLNDDMEACISDLGLAMAIPDGYTRVLISYVLGTMAYIAPEYFQQPELSEKCDIFSFGMLLISLVR-GVPSFVFHQNGEE 422 (487)
Q Consensus 344 ll~~~~~~kl~DFg~s~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DvwslG~~l~ellt-g~~pf~~~~~~~~ 422 (487)
+++.++.+||+|||+++...............+++.|++||.+.+..++.++||||||+++|+|++ |.+||.....
T Consensus 145 li~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~sDi~slG~il~el~~~g~~p~~~~~~--- 221 (273)
T cd05074 145 MLNENMTVCVADFGLSKKIYSGDYYRQGCASKLPVKWLALESLADNVYTTHSDVWAFGVTMWEIMTRGQTPYAGVEN--- 221 (273)
T ss_pred EEcCCCCEEECcccccccccCCcceecCCCccCchhhcCHhHHhcCccchhhhhHHHHHHHHHHhhCCCCCCCCCCH---
Confidence 999999999999999886643322211123345678999999998889999999999999999999 8899843221
Q ss_pred cccHHHHHHHHhcCCCCCccCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCChHHHHHHHhhh
Q 011360 423 ICSPEWLRKVMNSKNPSRAIDPRLPGNGYEKKMLHVLKIAYICTLHDPEERPNSQYVRCRLSQL 486 (487)
Q Consensus 423 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~~il~~L~~l 486 (487)
.+............ .++ ..+..+.+++.+||+.+|++|||+.++++.|+.+
T Consensus 222 ---~~~~~~~~~~~~~~--~~~--------~~~~~~~~l~~~~l~~~p~~Rps~~~~~~~l~~~ 272 (273)
T cd05074 222 ---SEIYNYLIKGNRLK--QPP--------DCLEDVYELMCQCWSPEPKCRPSFQHLRDQLELI 272 (273)
T ss_pred ---HHHHHHHHcCCcCC--CCC--------CCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 12222222222111 111 1235689999999999999999999999999876
No 251
>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=8e-37 Score=295.61 Aligned_cols=262 Identities=25% Similarity=0.350 Sum_probs=203.0
Q ss_pred ccccccccccccceeEEEEEecCCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCCCCccccce
Q 011360 193 CFASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQIRHRNILPLLA 272 (487)
Q Consensus 193 ~~~~~~~lg~G~~g~v~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~ 272 (487)
+|...+.||.|++|.||++... .++..+|+|.+... ........+.+|+.+++.++||||+++++
T Consensus 2 ~~~~~~~lg~g~~~~v~~~~~~-~~~~~~~~k~~~~~--------------~~~~~~~~~~~e~~~l~~l~h~~iv~~~~ 66 (287)
T cd06621 2 KIVELSRLGEGAGGSVTKCRLK-NTGMIFALKTITTD--------------PNPDLQKQILRELEINKSCKSPYIVKYYG 66 (287)
T ss_pred ceEEEEEeccCCceEEEEEEEC-CCCeEEEEEEEecC--------------CchHHHHHHHHHHHHHHhCCCCCeeeeee
Confidence 5888999999999999999753 57889999987421 11234566788999999999999999999
Q ss_pred EEecC--CeeEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCC
Q 011360 273 HMVRP--DCHLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVLLNDDME 350 (487)
Q Consensus 273 ~~~~~--~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nill~~~~~ 350 (487)
++... +.+|+||||+++++|.+++.........++...+..++.|++.||.|| |+.|++|+||+|+||+++.++.
T Consensus 67 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~l---H~~~i~H~dl~~~nil~~~~~~ 143 (287)
T cd06621 67 AFLDESSSSIGIAMEYCEGGSLDSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYL---HSRKIIHRDIKPSNILLTRKGQ 143 (287)
T ss_pred EEEccCCCeEEEEEEecCCCCHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHH---HHCCcccCCCCHHHEEEecCCe
Confidence 88653 468999999999999998876544556788999999999999999999 7789999999999999999999
Q ss_pred EEEeccCCccccCCCCceeeEeeecccccccCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCccccCCCCccccHHHHH
Q 011360 351 ACISDLGLAMAIPDGYTRVLISYVLGTMAYIAPEYFQQPELSEKCDIFSFGMLLISLVRGVPSFVFHQNGEEICSPEWLR 430 (487)
Q Consensus 351 ~kl~DFg~s~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DvwslG~~l~elltg~~pf~~~~~~~~~~~~~~~~ 430 (487)
++|+|||++........ ....++..|+|||.+.+..++.++||||||+++|+|++|..||...... .....+...
T Consensus 144 ~~l~dfg~~~~~~~~~~----~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~-~~~~~~~~~ 218 (287)
T cd06621 144 VKLCDFGVSGELVNSLA----GTFTGTSFYMAPERIQGKPYSITSDVWSLGLTLLEVAQNRFPFPPEGEP-PLGPIELLS 218 (287)
T ss_pred EEEeecccccccccccc----ccccCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCcccCC-CCChHHHHH
Confidence 99999999865533222 2345788999999999889999999999999999999999999654321 111122222
Q ss_pred HHHhcCCCCCccCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCChHHHHH
Q 011360 431 KVMNSKNPSRAIDPRLPGNGYEKKMLHVLKIAYICTLHDPEERPNSQYVRC 481 (487)
Q Consensus 431 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~~il~ 481 (487)
.......+ .++.... .....+..+.+++.+||..+|++|||+.+++.
T Consensus 219 ~~~~~~~~--~~~~~~~--~~~~~~~~~~~li~~~l~~~p~~Rpt~~eil~ 265 (287)
T cd06621 219 YIVNMPNP--ELKDEPG--NGIKWSEEFKDFIKQCLEKDPTRRPTPWDMLE 265 (287)
T ss_pred HHhcCCch--hhccCCC--CCCchHHHHHHHHHHHcCCCcccCCCHHHHHh
Confidence 22211111 1111111 11124567899999999999999999999986
No 252
>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1. Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25
Probab=100.00 E-value=1.9e-37 Score=298.29 Aligned_cols=248 Identities=28% Similarity=0.411 Sum_probs=198.4
Q ss_pred ccccccccccccceeEEEEEecCCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCCCCccccce
Q 011360 193 CFASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQIRHRNILPLLA 272 (487)
Q Consensus 193 ~~~~~~~lg~G~~g~v~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~ 272 (487)
.|...+.||.|+||.||+|.. ..++..||+|.+.. .........+.+|+.+++.++||||+++++
T Consensus 5 ~y~~~~~l~~g~~~~vy~~~~-~~~~~~vaiK~~~~--------------~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~ 69 (277)
T cd06642 5 LFTKLERIGKGSFGEVYKGID-NRTKEVVAIKIIDL--------------EEAEDEIEDIQQEITVLSQCDSPYITRYYG 69 (277)
T ss_pred HHHHHHHhcCCCCeeEEEEEE-cCCCeEEEEEEecc--------------ccchHHHHHHHHHHHHHHcCCCCccHhhhc
Confidence 478889999999999999975 45788999998732 111223467889999999999999999999
Q ss_pred EEecCCeeEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCCEE
Q 011360 273 HMVRPDCHLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVLLNDDMEAC 352 (487)
Q Consensus 273 ~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nill~~~~~~k 352 (487)
++...+..|+||||+++++|.+++.. ..+++..+..++.|++.|+.|| |++|++|+||+|+||+++.++.++
T Consensus 70 ~~~~~~~~~lv~e~~~~~~L~~~~~~-----~~~~~~~~~~~~~~i~~~l~~l---H~~~ivH~dl~p~ni~i~~~~~~~ 141 (277)
T cd06642 70 SYLKGTKLWIIMEYLGGGSALDLLKP-----GPLEETYIATILREILKGLDYL---HSERKIHRDIKAANVLLSEQGDVK 141 (277)
T ss_pred ccccCCceEEEEEccCCCcHHHHhhc-----CCCCHHHHHHHHHHHHHHHHHH---hcCCeeccCCChheEEEeCCCCEE
Confidence 99999999999999999999998853 4688899999999999999999 778999999999999999999999
Q ss_pred EeccCCccccCCCCceeeEeeecccccccCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCccccCCCCccccHHHHHHH
Q 011360 353 ISDLGLAMAIPDGYTRVLISYVLGTMAYIAPEYFQQPELSEKCDIFSFGMLLISLVRGVPSFVFHQNGEEICSPEWLRKV 432 (487)
Q Consensus 353 l~DFg~s~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DvwslG~~l~elltg~~pf~~~~~~~~~~~~~~~~~~ 432 (487)
|+|||++......... .....++..|+|||++.+..++.++|+||||+++|+|++|..||...... ......
T Consensus 142 l~dfg~~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~------~~~~~~ 213 (277)
T cd06642 142 LADFGVAGQLTDTQIK--RNTFVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPPNSDLHPM------RVLFLI 213 (277)
T ss_pred EccccccccccCcchh--hhcccCcccccCHHHhCcCCCchhhhHHHHHHHHHHHHhCCCCCcccchh------hHHhhh
Confidence 9999998765433211 12345788999999999888999999999999999999999998432211 111111
Q ss_pred HhcCCCCCccCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCChHHHHH
Q 011360 433 MNSKNPSRAIDPRLPGNGYEKKMLHVLKIAYICTLHDPEERPNSQYVRC 481 (487)
Q Consensus 433 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~~il~ 481 (487)
....+ +.++ ...+..+.+++.+||+.+|++|||+.++++
T Consensus 214 -~~~~~-----~~~~----~~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 252 (277)
T cd06642 214 -PKNSP-----PTLE----GQYSKPFKEFVEACLNKDPRFRPTAKELLK 252 (277)
T ss_pred -hcCCC-----CCCC----cccCHHHHHHHHHHccCCcccCcCHHHHHH
Confidence 11111 1111 123356889999999999999999999987
No 253
>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti
Probab=100.00 E-value=4.7e-37 Score=291.90 Aligned_cols=252 Identities=19% Similarity=0.327 Sum_probs=201.8
Q ss_pred ccccccccccccceeEEEEEecCCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCCCCccccce
Q 011360 193 CFASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQIRHRNILPLLA 272 (487)
Q Consensus 193 ~~~~~~~lg~G~~g~v~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~ 272 (487)
+|++.+.||.|+||.+|++.. ..+++.||+|.+.. ..........+.+|+.++++++||||+++++
T Consensus 1 ~y~~~~~lg~g~~g~~~~~~~-~~~~~~~~ik~~~~-------------~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~ 66 (256)
T cd08218 1 KYVKVKKIGEGSFGKAILVKS-KEDGKQYVIKEINI-------------SKMSPKEREESRKEVAVLSNMKHPNIVQYQE 66 (256)
T ss_pred CceEEEEeccCCceEEEEEEE-cCCCCEEEEEEEEh-------------HhCChHHHHHHHHHHHHHHhCCCCCeeeeEe
Confidence 378899999999999999975 45788999998742 1112234457788999999999999999999
Q ss_pred EEecCCeeEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCCEE
Q 011360 273 HMVRPDCHLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVLLNDDMEAC 352 (487)
Q Consensus 273 ~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nill~~~~~~k 352 (487)
++...+..++||||+++++|.+++.. .....+++..+..++.|++.||.|| |++|++|+||+|+||+++.++.++
T Consensus 67 ~~~~~~~~~lv~e~~~~~~l~~~~~~--~~~~~~~~~~~~~~~~~l~~~l~~l---h~~~i~h~~l~~~nil~~~~~~~~ 141 (256)
T cd08218 67 SFEENGNLYIVMDYCEGGDLYKKINA--QRGVLFPEDQILDWFVQICLALKHV---HDRKILHRDIKSQNIFLTKDGTIK 141 (256)
T ss_pred eecCCCeEEEEEecCCCCcHHHHHHh--ccCCCCCHHHHHHHHHHHHHHHHHH---HhCCEecCCCCHHHEEEcCCCCEE
Confidence 99999999999999999999998864 2234578899999999999999999 678899999999999999999999
Q ss_pred EeccCCccccCCCCceeeEeeecccccccCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCccccCCCCccccHHHHHHH
Q 011360 353 ISDLGLAMAIPDGYTRVLISYVLGTMAYIAPEYFQQPELSEKCDIFSFGMLLISLVRGVPSFVFHQNGEEICSPEWLRKV 432 (487)
Q Consensus 353 l~DFg~s~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DvwslG~~l~elltg~~pf~~~~~~~~~~~~~~~~~~ 432 (487)
|+|||++......... .....|++.|+|||++.+..++.++|+||||+++|+|++|..||... ...+.....
T Consensus 142 l~d~~~~~~~~~~~~~--~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~------~~~~~~~~~ 213 (256)
T cd08218 142 LGDFGIARVLNSTVEL--ARTCIGTPYYLSPEICENRPYNNKSDIWALGCVLYEMCTLKHAFEAG------NMKNLVLKI 213 (256)
T ss_pred EeeccceeecCcchhh--hhhccCCccccCHHHhCCCCCCCccchhHHHHHHHHHHcCCCCccCC------CHHHHHHHH
Confidence 9999998765443221 12345788999999999888999999999999999999999999432 122333333
Q ss_pred HhcCCCCCccCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCChHHHHH
Q 011360 433 MNSKNPSRAIDPRLPGNGYEKKMLHVLKIAYICTLHDPEERPNSQYVRC 481 (487)
Q Consensus 433 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~~il~ 481 (487)
..+..+. .+ .....++.+++.+||+.+|++||++.++++
T Consensus 214 ~~~~~~~------~~----~~~~~~~~~li~~~l~~~p~~Rp~~~~vl~ 252 (256)
T cd08218 214 IRGSYPP------VS----SHYSYDLRNLVSQLFKRNPRDRPSVNSILE 252 (256)
T ss_pred hcCCCCC------Cc----ccCCHHHHHHHHHHhhCChhhCcCHHHHhh
Confidence 3322211 11 112356889999999999999999999986
No 254
>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]
Probab=100.00 E-value=3.5e-38 Score=281.32 Aligned_cols=253 Identities=23% Similarity=0.403 Sum_probs=202.5
Q ss_pred cccccccccccccceeEEEEEecCCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccC-CCCCcccc
Q 011360 192 DCFASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQI-RHRNILPL 270 (487)
Q Consensus 192 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpnIv~l 270 (487)
+....+..||.|+.|.|++++++ ++|..+|||.+.. ....+..++++..+.++..- .+|+||+.
T Consensus 92 ndl~~l~dlGsGtcG~V~k~~~r-s~~~iiAVK~M~r--------------t~Nkee~kRILmDldvv~~s~dcpyIV~c 156 (391)
T KOG0983|consen 92 NDLENLGDLGSGTCGQVWKMRFR-STGHIIAVKQMRR--------------TGNKEENKRILMDLDVVLKSHDCPYIVQC 156 (391)
T ss_pred HHhhhHHhhcCCCccceEEEEEc-ccceEEEEEeecc--------------cCCHHHHHHHHHhhhHHhhccCCCeeeee
Confidence 34567778999999999999875 5889999999854 23344567778888877665 58999999
Q ss_pred ceEEecCCeeEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCC
Q 011360 271 LAHMVRPDCHLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVLLNDDME 350 (487)
Q Consensus 271 ~~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nill~~~~~ 350 (487)
+|+|..+..+++.||.| ...+..++... .+++++..+-++...++.||.||.+.| ||+|||+||+|||+++.|+
T Consensus 157 ~GyFi~n~dV~IcMelM-s~C~ekLlkri---k~piPE~ilGk~tva~v~AL~YLKeKH--~viHRDvKPSNILlDe~Gn 230 (391)
T KOG0983|consen 157 FGYFITNTDVFICMELM-STCAEKLLKRI---KGPIPERILGKMTVAIVKALYYLKEKH--GVIHRDVKPSNILLDERGN 230 (391)
T ss_pred eeEEeeCchHHHHHHHH-HHHHHHHHHHh---cCCchHHhhhhhHHHHHHHHHHHHHhc--ceeecccCccceEEccCCC
Confidence 99999999999999998 54677777643 567899888899999999999998766 6999999999999999999
Q ss_pred EEEeccCCccccCCCCceeeEeeecccccccCCcccC---CCCCCchhHHHHHHHHHHHHHhCCCCccccCCCCccccHH
Q 011360 351 ACISDLGLAMAIPDGYTRVLISYVLGTMAYIAPEYFQ---QPELSEKCDIFSFGMLLISLVRGVPSFVFHQNGEEICSPE 427 (487)
Q Consensus 351 ~kl~DFg~s~~~~~~~~~~~~~~~~gt~~y~aPE~l~---~~~~~~~~DvwslG~~l~elltg~~pf~~~~~~~~~~~~~ 427 (487)
+||||||++-.+-+.... +...|.+.|||||.+. ...|+.++||||||+.++||.||..||.+...+ .+
T Consensus 231 iKlCDFGIsGrlvdSkAh---trsAGC~~YMaPERidp~~~~kYDiRaDVWSlGITlveLaTg~yPy~~c~td-----Fe 302 (391)
T KOG0983|consen 231 IKLCDFGISGRLVDSKAH---TRSAGCAAYMAPERIDPPDKPKYDIRADVWSLGITLVELATGQYPYKGCKTD-----FE 302 (391)
T ss_pred EEeecccccceeeccccc---ccccCCccccCccccCCCCCCccchhhhhhhhccchhhhhcccCCCCCCCcc-----HH
Confidence 999999999877655443 4456999999999886 457999999999999999999999999554332 23
Q ss_pred HHHHHHhcCCCCCccCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCChHHHHH
Q 011360 428 WLRKVMNSKNPSRAIDPRLPGNGYEKKMLHVLKIAYICTLHDPEERPNSQYVRC 481 (487)
Q Consensus 428 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~~il~ 481 (487)
.+..+.+ ..| .. +++..- .+.++.+++..||.+|+.+||...++++
T Consensus 303 ~ltkvln-~eP-P~----L~~~~g--FSp~F~~fv~~CL~kd~r~RP~Y~~Ll~ 348 (391)
T KOG0983|consen 303 VLTKVLN-EEP-PL----LPGHMG--FSPDFQSFVKDCLTKDHRKRPKYNKLLE 348 (391)
T ss_pred HHHHHHh-cCC-CC----CCcccC--cCHHHHHHHHHHhhcCcccCcchHHHhc
Confidence 3444444 333 22 332211 4567999999999999999999999875
No 255
>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi
Probab=100.00 E-value=5.6e-37 Score=292.41 Aligned_cols=257 Identities=22% Similarity=0.371 Sum_probs=203.9
Q ss_pred ccccccccccccceeEEEEEecCCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCCCCccccce
Q 011360 193 CFASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQIRHRNILPLLA 272 (487)
Q Consensus 193 ~~~~~~~lg~G~~g~v~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~ 272 (487)
+|.+.+.||.|+||.||++.. ..++..+|+|.+.. ..........+..|+.+++.++||||+++++
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~-~~~~~~~~~k~~~~-------------~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~ 66 (265)
T cd08217 1 DYEVLETIGKGSFGTVRKVRR-KSDGKILVWKEIDY-------------GNMTEKEKQQLVSEVNILRELKHPNIVRYYD 66 (265)
T ss_pred CceeeeeeccCCCeEEEEeee-cCCCCEEEEEEEec-------------ccCCHHHHHHHHHHHHHHHhcCCCccceeee
Confidence 378889999999999999975 45788999998742 1122334567788999999999999999999
Q ss_pred EEec--CCeeEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcC--CCCeeecCCCCCCEEeCCC
Q 011360 273 HMVR--PDCHLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYH--SASIIHGDIKPRNVLLNDD 348 (487)
Q Consensus 273 ~~~~--~~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h--~~givH~Dlkp~Nill~~~ 348 (487)
++.. ....+++|||+++++|.+++.........+++..++.++.|++.||.|||..+ +.+++|+||+|+||+++.+
T Consensus 67 ~~~~~~~~~~~~~~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~~~i~h~dl~p~nili~~~ 146 (265)
T cd08217 67 RIIDRSNQTLYIVMEYCEGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLALYECHNRSDPGNTVLHRDLKPANIFLDAN 146 (265)
T ss_pred eeecCCCCEEEEEehhccCCCHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhcCccccCcceecCCCHHHEEEecC
Confidence 7764 45679999999999999999875555678899999999999999999994332 8899999999999999999
Q ss_pred CCEEEeccCCccccCCCCceeeEeeecccccccCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCccccCCCCccccHHH
Q 011360 349 MEACISDLGLAMAIPDGYTRVLISYVLGTMAYIAPEYFQQPELSEKCDIFSFGMLLISLVRGVPSFVFHQNGEEICSPEW 428 (487)
Q Consensus 349 ~~~kl~DFg~s~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DvwslG~~l~elltg~~pf~~~~~~~~~~~~~~ 428 (487)
+.+||+|||++......... .....+++.|+|||.+.+..++.++|+||||+++|+|++|..||.... ....
T Consensus 147 ~~~kl~d~g~~~~~~~~~~~--~~~~~~~~~~~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~------~~~~ 218 (265)
T cd08217 147 NNVKLGDFGLAKILGHDSSF--AKTYVGTPYYMSPEQLNHMSYDEKSDIWSLGCLIYELCALSPPFTARN------QLQL 218 (265)
T ss_pred CCEEEecccccccccCCccc--ccccccCCCccChhhhcCCCCCchhHHHHHHHHHHHHHHCCCcccCcC------HHHH
Confidence 99999999999876543321 133468999999999998889999999999999999999999995432 1122
Q ss_pred HHHHHhcCCCCCccCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCChHHHHH
Q 011360 429 LRKVMNSKNPSRAIDPRLPGNGYEKKMLHVLKIAYICTLHDPEERPNSQYVRC 481 (487)
Q Consensus 429 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~~il~ 481 (487)
. ......... . ++ ...+..+.+++.+||+.+|++|||+.+|++
T Consensus 219 ~-~~~~~~~~~-~----~~----~~~~~~~~~l~~~~l~~~p~~Rp~~~~il~ 261 (265)
T cd08217 219 A-SKIKEGKFR-R----IP----YRYSSELNEVIKSMLNVDPDKRPSTEELLQ 261 (265)
T ss_pred H-HHHhcCCCC-C----Cc----cccCHHHHHHHHHHccCCcccCCCHHHHhh
Confidence 2 222222211 1 11 123356889999999999999999999986
No 256
>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter
Probab=100.00 E-value=3.7e-37 Score=296.34 Aligned_cols=249 Identities=27% Similarity=0.400 Sum_probs=199.9
Q ss_pred ccccccccccccceeEEEEEecCCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCCCCccccce
Q 011360 193 CFASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQIRHRNILPLLA 272 (487)
Q Consensus 193 ~~~~~~~lg~G~~g~v~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~ 272 (487)
.|...+.||.|+||.||.|... .++..||+|.+.. .........+.+|+.+++.+.||||+++++
T Consensus 5 ~y~~~~~lg~g~~~~vy~~~~~-~~~~~vaiK~~~~--------------~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~ 69 (277)
T cd06640 5 LFTKLERIGKGSFGEVFKGIDN-RTQQVVAIKIIDL--------------EEAEDEIEDIQQEITVLSQCDSPYVTKYYG 69 (277)
T ss_pred hhhhhhhcccCCCeEEEEEEEc-cCCEEEEEEEEec--------------cccHHHHHHHHHHHHHHHhCCCCCEeeEEE
Confidence 5888899999999999999753 5688999998732 111234567888999999999999999999
Q ss_pred EEecCCeeEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCCEE
Q 011360 273 HMVRPDCHLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVLLNDDMEAC 352 (487)
Q Consensus 273 ~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nill~~~~~~k 352 (487)
++.++...|+||||+++++|.+++.. ..+++..+..++.|++.||.|| |+.+++|+||+|+||+++.++.++
T Consensus 70 ~~~~~~~~~lv~e~~~~~~L~~~i~~-----~~l~~~~~~~~~~~l~~~l~~l---h~~~ivH~dl~p~Nil~~~~~~~~ 141 (277)
T cd06640 70 SYLKGTKLWIIMEYLGGGSALDLLRA-----GPFDEFQIATMLKEILKGLDYL---HSEKKIHRDIKAANVLLSEQGDVK 141 (277)
T ss_pred EEEECCEEEEEEecCCCCcHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHH---HhCCccCcCCChhhEEEcCCCCEE
Confidence 99999999999999999999998863 4578889999999999999999 778899999999999999999999
Q ss_pred EeccCCccccCCCCceeeEeeecccccccCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCccccCCCCccccHHHHHHH
Q 011360 353 ISDLGLAMAIPDGYTRVLISYVLGTMAYIAPEYFQQPELSEKCDIFSFGMLLISLVRGVPSFVFHQNGEEICSPEWLRKV 432 (487)
Q Consensus 353 l~DFg~s~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DvwslG~~l~elltg~~pf~~~~~~~~~~~~~~~~~~ 432 (487)
|+|||++......... .....++..|+|||.+.+..++.++|+||||+++|+|+||..||...... .... .
T Consensus 142 l~dfg~~~~~~~~~~~--~~~~~~~~~y~apE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~------~~~~-~ 212 (277)
T cd06640 142 LADFGVAGQLTDTQIK--RNTFVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPPNSDMHPM------RVLF-L 212 (277)
T ss_pred EcccccceeccCCccc--cccccCcccccCHhHhccCCCccHHHHHHHHHHHHHHHHCCCCCCCcChH------hHhh-h
Confidence 9999999766443211 12345788999999998888999999999999999999999999533221 1111 1
Q ss_pred HhcCCCCCccCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCChHHHHHH
Q 011360 433 MNSKNPSRAIDPRLPGNGYEKKMLHVLKIAYICTLHDPEERPNSQYVRCR 482 (487)
Q Consensus 433 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~~il~~ 482 (487)
.....+ + ......+..+.+++.+||+.+|++|||+.+++..
T Consensus 213 ~~~~~~-----~----~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 253 (277)
T cd06640 213 IPKNNP-----P----TLTGEFSKPFKEFIDACLNKDPSFRPTAKELLKH 253 (277)
T ss_pred hhcCCC-----C----CCchhhhHHHHHHHHHHcccCcccCcCHHHHHhC
Confidence 111111 1 1122345678899999999999999999999753
No 257
>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut
Probab=100.00 E-value=4.7e-37 Score=296.39 Aligned_cols=266 Identities=21% Similarity=0.304 Sum_probs=203.4
Q ss_pred cccccccccccccceeEEEEEec---CCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCCCCcc
Q 011360 192 DCFASLEKIGSGGCGEVYKAELP---GSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQIRHRNIL 268 (487)
Q Consensus 192 ~~~~~~~~lg~G~~g~v~~~~~~---~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv 268 (487)
..|.+.+.||.|+||.||++.+. ..++..+|+|.+.... .......+.+|+.+++.+.||||+
T Consensus 4 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~--------------~~~~~~~~~~ei~~l~~l~~~~i~ 69 (284)
T cd05038 4 RHLKFIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSG--------------EEQHRSDFEREIEILRTLDHENIV 69 (284)
T ss_pred hhchhheeeccCCCeeEEEeeecCCCCCCceEEEEEEecccc--------------chHHHHHHHHHHHHHHhCCCCChh
Confidence 35788899999999999999864 2357899999874311 113456788999999999999999
Q ss_pred ccceEEec--CCeeEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeC
Q 011360 269 PLLAHMVR--PDCHLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVLLN 346 (487)
Q Consensus 269 ~l~~~~~~--~~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nill~ 346 (487)
++++++.. ....+++|||+++++|.+++... ...+++..+..++.|++.||.|| |+.|++|+||||+||+++
T Consensus 70 ~~~~~~~~~~~~~~~lv~e~~~~~~l~~~l~~~---~~~~~~~~~~~~~~~l~~aL~~l---H~~~i~H~dl~p~nil~~ 143 (284)
T cd05038 70 KYKGVCEKPGGRSLRLIMEYLPSGSLRDYLQRH---RDQINLKRLLLFSSQICKGMDYL---GSQRYIHRDLAARNILVE 143 (284)
T ss_pred eEEeeeecCCCCceEEEEecCCCCCHHHHHHhC---ccccCHHHHHHHHHHHHHHHHHH---HhCCeecCCCCHHhEEEc
Confidence 99998877 56789999999999999999742 33589999999999999999999 678899999999999999
Q ss_pred CCCCEEEeccCCccccCCCCceee-EeeecccccccCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCccccCCCCcc--
Q 011360 347 DDMEACISDLGLAMAIPDGYTRVL-ISYVLGTMAYIAPEYFQQPELSEKCDIFSFGMLLISLVRGVPSFVFHQNGEEI-- 423 (487)
Q Consensus 347 ~~~~~kl~DFg~s~~~~~~~~~~~-~~~~~gt~~y~aPE~l~~~~~~~~~DvwslG~~l~elltg~~pf~~~~~~~~~-- 423 (487)
.++.++|+|||.+........... .....++..|+|||.+.+..++.++||||||+++|+|+||..||.........
T Consensus 144 ~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~ 223 (284)
T cd05038 144 SEDLVKISDFGLAKVLPEDKDYYYVKEPGESPIFWYAPECLRTSKFSSASDVWSFGVTLYELFTYGDPSQSPPAEFLRMI 223 (284)
T ss_pred CCCCEEEcccccccccccCCcceeccCCCCCcccccCcHHHccCCCCcccchHHHhhhhheeeccCCCcccccchhcccc
Confidence 999999999999987653322111 11223456799999998888999999999999999999999888443221100
Q ss_pred ------ccHHHHHHHHhcCCCCCccCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCChHHHHHHHhhh
Q 011360 424 ------CSPEWLRKVMNSKNPSRAIDPRLPGNGYEKKMLHVLKIAYICTLHDPEERPNSQYVRCRLSQL 486 (487)
Q Consensus 424 ------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~~il~~L~~l 486 (487)
.............. ....+. ..+.++.+++.+||+.+|++|||+.+|+++|+.+
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~-~~~~~~--------~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~i 283 (284)
T cd05038 224 GIAQGQMIVTRLLELLKEGE-RLPRPP--------SCPDEVYDLMKLCWEAEPQDRPSFADLILIVDRL 283 (284)
T ss_pred ccccccccHHHHHHHHHcCC-cCCCCc--------cCCHHHHHHHHHHhccChhhCCCHHHHHHHHhhc
Confidence 01111111221111 111011 1225688999999999999999999999999876
No 258
>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase. Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ
Probab=100.00 E-value=4.9e-37 Score=291.81 Aligned_cols=251 Identities=24% Similarity=0.375 Sum_probs=197.2
Q ss_pred ccccccccccccceeEEEEEecCCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCCCCccccce
Q 011360 193 CFASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQIRHRNILPLLA 272 (487)
Q Consensus 193 ~~~~~~~lg~G~~g~v~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~ 272 (487)
.|.+.+.||.|+||.||++.+. ++..+|+|.+... ......+.+|+.+++++.||||+++++
T Consensus 5 ~~~~~~~ig~g~~g~v~~~~~~--~~~~~~~k~~~~~----------------~~~~~~~~~e~~~l~~l~~~~i~~~~~ 66 (256)
T cd05112 5 ELTLVQEIGSGQFGLVWLGYWL--EKRKVAIKTIREG----------------AMSEEDFIEEAQVMMKLSHPKLVQLYG 66 (256)
T ss_pred HeEEEeeecCcccceEEEEEEe--CCCeEEEEECCCC----------------CCCHHHHHHHHHHHHhCCCCCeeeEEE
Confidence 5888999999999999999764 4678999987321 111235778999999999999999999
Q ss_pred EEecCCeeEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCCEE
Q 011360 273 HMVRPDCHLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVLLNDDMEAC 352 (487)
Q Consensus 273 ~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nill~~~~~~k 352 (487)
++......+++|||+++++|.+++.. ....+++..+..++.|++.||.|| |+.|++|+||+|+||+++.++.++
T Consensus 67 ~~~~~~~~~~v~e~~~~~~L~~~~~~---~~~~~~~~~~~~~~~~l~~~l~~l---H~~~i~h~dl~p~ni~i~~~~~~~ 140 (256)
T cd05112 67 VCTERSPICLVFEFMEHGCLSDYLRA---QRGKFSQETLLGMCLDVCEGMAYL---ESSNVIHRDLAARNCLVGENQVVK 140 (256)
T ss_pred EEccCCceEEEEEcCCCCcHHHHHHh---CccCCCHHHHHHHHHHHHHHHHHH---HHCCccccccccceEEEcCCCeEE
Confidence 99999999999999999999998864 234578899999999999999999 677899999999999999999999
Q ss_pred EeccCCccccCCCCceeeEeeecccccccCCcccCCCCCCchhHHHHHHHHHHHHHh-CCCCccccCCCCccccHHHHHH
Q 011360 353 ISDLGLAMAIPDGYTRVLISYVLGTMAYIAPEYFQQPELSEKCDIFSFGMLLISLVR-GVPSFVFHQNGEEICSPEWLRK 431 (487)
Q Consensus 353 l~DFg~s~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DvwslG~~l~ellt-g~~pf~~~~~~~~~~~~~~~~~ 431 (487)
|+|||.+.......... .....++..|+|||.+.+..++.++||||||+++|+|++ |..||.... ..+....
T Consensus 141 l~d~g~~~~~~~~~~~~-~~~~~~~~~~~aPe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~------~~~~~~~ 213 (256)
T cd05112 141 VSDFGMTRFVLDDQYTS-STGTKFPVKWSSPEVFSFSKYSSKSDVWSFGVLMWEVFSEGKTPYENRS------NSEVVET 213 (256)
T ss_pred ECCCcceeecccCcccc-cCCCccchhhcCHhHhccCCcChHHHHHHHHHHHHHHHcCCCCCCCcCC------HHHHHHH
Confidence 99999987654332111 112235678999999998889999999999999999998 899994322 1122222
Q ss_pred HHhcCCCCCccCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCChHHHHHHHh
Q 011360 432 VMNSKNPSRAIDPRLPGNGYEKKMLHVLKIAYICTLHDPEERPNSQYVRCRLS 484 (487)
Q Consensus 432 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~~il~~L~ 484 (487)
....... ..+.. .+..+.+++.+||+.+|++|||+.++++.|.
T Consensus 214 ~~~~~~~---~~~~~-------~~~~~~~l~~~~l~~~p~~Rp~~~~~l~~l~ 256 (256)
T cd05112 214 INAGFRL---YKPRL-------ASQSVYELMQHCWKERPEDRPSFSLLLHQLA 256 (256)
T ss_pred HhCCCCC---CCCCC-------CCHHHHHHHHHHcccChhhCCCHHHHHHhhC
Confidence 2221111 11111 1256899999999999999999999999873
No 259
>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte
Probab=100.00 E-value=5.9e-37 Score=294.02 Aligned_cols=264 Identities=25% Similarity=0.370 Sum_probs=200.2
Q ss_pred cccccccccccceeEEEEEecCCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCCCCccccceE
Q 011360 194 FASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQIRHRNILPLLAH 273 (487)
Q Consensus 194 ~~~~~~lg~G~~g~v~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~ 273 (487)
|.+.+.||.|+||.||+|.. ..++..+|+|.+........ ..........+.+..|+.+++.++||||++++++
T Consensus 3 ~~~~~~lg~g~~~~vy~~~~-~~~~~~~a~K~~~~~~~~~~-----~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~ 76 (272)
T cd06629 3 WVKGELIGKGTYGRVYLALN-VTTGEMMAVKQVELPATIAG-----RHDSRQKDMVKALRSEIETLKDLDHLNIVQYLGF 76 (272)
T ss_pred eeecceecccCceEEEEEee-cCCCceeeeeeeechhhhhc-----ccchHHHHHHHHHHHHHHHHHhcCCCCcceEEEE
Confidence 67788999999999999964 45788999998743111000 0001112234577889999999999999999999
Q ss_pred EecCCeeEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCCEEE
Q 011360 274 MVRPDCHLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVLLNDDMEACI 353 (487)
Q Consensus 274 ~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nill~~~~~~kl 353 (487)
+...+..++||||+++++|.+++.. ...+++..+..++.|++.||.|| |++|++||||+|+||+++.++.++|
T Consensus 77 ~~~~~~~~lv~e~~~~~~L~~~l~~----~~~l~~~~~~~~~~qi~~~l~~l---H~~~i~H~dl~~~nil~~~~~~~~l 149 (272)
T cd06629 77 ETTEEYLSIFLEYVPGGSIGSCLRT----YGRFEEQLVRFFTEQVLEGLAYL---HSKGILHRDLKADNLLVDADGICKI 149 (272)
T ss_pred eccCCceEEEEecCCCCcHHHHHhh----ccCCCHHHHHHHHHHHHHHHHHH---hhCCeeecCCChhhEEEcCCCeEEE
Confidence 9999999999999999999999865 35688899999999999999999 7789999999999999999999999
Q ss_pred eccCCccccCCCCceeeEeeecccccccCCcccCCCC--CCchhHHHHHHHHHHHHHhCCCCccccCCCCccccHHHHHH
Q 011360 354 SDLGLAMAIPDGYTRVLISYVLGTMAYIAPEYFQQPE--LSEKCDIFSFGMLLISLVRGVPSFVFHQNGEEICSPEWLRK 431 (487)
Q Consensus 354 ~DFg~s~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~--~~~~~DvwslG~~l~elltg~~pf~~~~~~~~~~~~~~~~~ 431 (487)
+|||++................++..|+|||.+.... ++.++|+||||+++|++++|..||..... .+....
T Consensus 150 ~d~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~------~~~~~~ 223 (272)
T cd06629 150 SDFGISKKSDDIYDNDQNMSMQGSVFWMAPEVIHSYSQGYSAKVDIWSLGCVVLEMFAGRRPWSDEEA------IAAMFK 223 (272)
T ss_pred eeccccccccccccccccccccCCccccCHHHhccccCCCCccchhHHHHHHHHHHHhCCCCCcCcch------HHHHHH
Confidence 9999987654332222223345889999999987654 88999999999999999999999942211 111111
Q ss_pred HHhcCCCCCccCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCChHHHHH
Q 011360 432 VMNSKNPSRAIDPRLPGNGYEKKMLHVLKIAYICTLHDPEERPNSQYVRC 481 (487)
Q Consensus 432 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~~il~ 481 (487)
..... .... ++.......+..+.+++.+||..+|++|||+.++++
T Consensus 224 ~~~~~-~~~~----~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~ 268 (272)
T cd06629 224 LGNKR-SAPP----IPPDVSMNLSPVALDFLNACFTINPDNRPTARELLQ 268 (272)
T ss_pred hhccc-cCCc----CCccccccCCHHHHHHHHHHhcCChhhCCCHHHHhh
Confidence 11111 1111 111111233467889999999999999999999875
No 260
>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin. Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre
Probab=100.00 E-value=3.9e-37 Score=298.37 Aligned_cols=255 Identities=25% Similarity=0.367 Sum_probs=196.3
Q ss_pred ccccccccccccccceeEEEEEecCCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccC-CCCCccc
Q 011360 191 EDCFASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQI-RHRNILP 269 (487)
Q Consensus 191 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpnIv~ 269 (487)
.++|.+.+.||.|+||.||++.. ..+++.+|+|.+... ......+..|+.++.++ +|||+++
T Consensus 21 ~~~y~~~~~l~~g~~~~vy~~~~-~~~~~~~aik~~~~~----------------~~~~~~~~~e~~~l~~l~~h~ni~~ 83 (291)
T cd06639 21 TDTWEIIETIGKGTYGKVYKVTN-KKDGSLAAVKILDPI----------------SDVDEEIEAEYNILQSLPNHPNVVK 83 (291)
T ss_pred CCCeEEEEEeecCCCeEEEEEEE-CCCCCEEEEEEeccc----------------ccHHHHHHHHHHHHHHhcCCCCeEE
Confidence 45699999999999999999975 457889999987321 11234556788888888 8999999
Q ss_pred cceEEecC-----CeeEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEE
Q 011360 270 LLAHMVRP-----DCHLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVL 344 (487)
Q Consensus 270 l~~~~~~~-----~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nil 344 (487)
+++++... +..++||||+++++|.+++.........+++..+..++.|++.||.|| |+.|++||||||+||+
T Consensus 84 ~~~~~~~~~~~~~~~~~lv~ey~~~~sL~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~l---H~~~ivH~dlkp~nil 160 (291)
T cd06639 84 FYGMFYKADKLVGGQLWLVLELCNGGSVTELVKGLLICGQRLDEAMISYILYGALLGLQHL---HNNRIIHRDVKGNNIL 160 (291)
T ss_pred EEEEEEeccccCCCeeEEEEEECCCCcHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHH---HhCCeeccCCCHHHEE
Confidence 99988753 357999999999999999875444456789999999999999999999 7788999999999999
Q ss_pred eCCCCCEEEeccCCccccCCCCceeeEeeecccccccCCcccCCC-----CCCchhHHHHHHHHHHHHHhCCCCccccCC
Q 011360 345 LNDDMEACISDLGLAMAIPDGYTRVLISYVLGTMAYIAPEYFQQP-----ELSEKCDIFSFGMLLISLVRGVPSFVFHQN 419 (487)
Q Consensus 345 l~~~~~~kl~DFg~s~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~-----~~~~~~DvwslG~~l~elltg~~pf~~~~~ 419 (487)
++.++.+||+|||++......... .....|+..|+|||.+... .++.++||||||+++|+|++|++||.....
T Consensus 161 i~~~~~~kl~dfg~~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slGvi~~el~~g~~p~~~~~~ 238 (291)
T cd06639 161 LTTEGGVKLVDFGVSAQLTSTRLR--RNTSVGTPFWMAPEVIACEQQYDYSYDARCDVWSLGITAIELGDGDPPLFDMHP 238 (291)
T ss_pred EcCCCCEEEeecccchhccccccc--ccCccCCccccChhhhcCCCCcccccCCccchHHHHHHHHHHhhCCCCCCCCcH
Confidence 999999999999998765432211 1234578899999988643 368899999999999999999999943221
Q ss_pred CCccccHHHHHHHHhcCCCCCccCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCChHHHHH
Q 011360 420 GEEICSPEWLRKVMNSKNPSRAIDPRLPGNGYEKKMLHVLKIAYICTLHDPEERPNSQYVRC 481 (487)
Q Consensus 420 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~~il~ 481 (487)
............+ ...+ .......+.+++.+||+.+|++|||+.+|++
T Consensus 239 ------~~~~~~~~~~~~~-~~~~-------~~~~~~~l~~li~~~l~~~p~~Rps~~~il~ 286 (291)
T cd06639 239 ------VKTLFKIPRNPPP-TLLH-------PEKWCRSFNHFISQCLIKDFEARPSVTHLLE 286 (291)
T ss_pred ------HHHHHHHhcCCCC-CCCc-------ccccCHHHHHHHHHHhhcChhhCcCHHHHhc
Confidence 1112222221111 1111 1122346889999999999999999999875
No 261
>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.4e-38 Score=314.57 Aligned_cols=245 Identities=27% Similarity=0.378 Sum_probs=198.7
Q ss_pred ccccccceeEEEEEecCCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCCCCccccceEEecCC
Q 011360 199 KIGSGGCGEVYKAELPGSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQIRHRNILPLLAHMVRPD 278 (487)
Q Consensus 199 ~lg~G~~g~v~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~ 278 (487)
+||+|.+|+||-|+ +.++...+|||.+.. ........+..|+.+-++|+|.|||+++|.+..++
T Consensus 582 VLGKGTYG~VYA~R-D~~tqvrIaIKEIpe---------------kdsr~~QPLhEEIaLH~~LrHkNIVrYLGs~senG 645 (1226)
T KOG4279|consen 582 VLGKGTYGTVYAAR-DMDTQVRIAIKEIPE---------------KDSREVQPLHEEIALHSTLRHKNIVRYLGSVSENG 645 (1226)
T ss_pred EeecCceeEEEeec-cccceeEEEeeeccc---------------ccchhhccHHHHHHHHHHHhhHhHHHHhhccCCCC
Confidence 59999999999997 567888999998732 22335567889999999999999999999999999
Q ss_pred eeEEEEEecCCCCHHHHHhhhhcCCCCC--ChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeC-CCCCEEEec
Q 011360 279 CHLLVYEFMKNGSLQDILDDVSRGRREL--DWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVLLN-DDMEACISD 355 (487)
Q Consensus 279 ~~~lv~E~~~~gsL~~~l~~~~~~~~~l--~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nill~-~~~~~kl~D 355 (487)
.+-|.||-++||||.++|... -+++ .+.+.-.+.+||++||.|| |++.|||||||-+|+|++ -.|.+||+|
T Consensus 646 f~kIFMEqVPGGSLSsLLrsk---WGPlKDNEstm~fYtkQILeGLkYL---Hen~IVHRDIKGDNVLvNTySGvlKISD 719 (1226)
T KOG4279|consen 646 FFKIFMEQVPGGSLSSLLRSK---WGPLKDNESTMNFYTKQILEGLKYL---HENKIVHRDIKGDNVLVNTYSGVLKISD 719 (1226)
T ss_pred eEEEEeecCCCCcHHHHHHhc---cCCCccchhHHHHHHHHHHHHhhhh---hhcceeeccccCCcEEEeeccceEEecc
Confidence 999999999999999999752 3445 6778889999999999999 566699999999999997 468999999
Q ss_pred cCCccccCCCCceeeEeeecccccccCCcccCCC--CCCchhHHHHHHHHHHHHHhCCCCccccCCCCccccHHHHHHHH
Q 011360 356 LGLAMAIPDGYTRVLISYVLGTMAYIAPEYFQQP--ELSEKCDIFSFGMLLISLVRGVPSFVFHQNGEEICSPEWLRKVM 433 (487)
Q Consensus 356 Fg~s~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~--~~~~~~DvwslG~~l~elltg~~pf~~~~~~~~~~~~~~~~~~~ 433 (487)
||-++++..- .....++.||..|||||++..+ .|+.++|||||||++.||.||++||...... . ..++
T Consensus 720 FGTsKRLAgi--nP~TETFTGTLQYMAPEvIDqG~RGYG~aADIWS~GCT~vEMATGrPPF~Elgsp------q--AAMF 789 (1226)
T KOG4279|consen 720 FGTSKRLAGI--NPCTETFTGTLQYMAPEVIDQGPRGYGKAADIWSFGCTMVEMATGRPPFVELGSP------Q--AAMF 789 (1226)
T ss_pred cccchhhccC--CccccccccchhhhChHhhccCCcCCCchhhhhhccceeEeeccCCCCeeecCCh------h--Hhhh
Confidence 9999876432 2233678899999999999765 6899999999999999999999999543321 1 1122
Q ss_pred hcCCCCCccCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCChHHHHH
Q 011360 434 NSKNPSRAIDPRLPGNGYEKKMLHVLKIAYICTLHDPEERPNSQYVRC 481 (487)
Q Consensus 434 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~~il~ 481 (487)
..+... .-| ....+.+.+...+|.+|+.++|.+||++++++.
T Consensus 790 kVGmyK--vHP----~iPeelsaeak~FilrcFepd~~~R~sA~~LL~ 831 (1226)
T KOG4279|consen 790 KVGMYK--VHP----PIPEELSAEAKNFILRCFEPDPCDRPSAKDLLQ 831 (1226)
T ss_pred hhccee--cCC----CCcHHHHHHHHHHHHHHcCCCcccCccHHHhcc
Confidence 222211 112 234567788999999999999999999999874
No 262
>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express
Probab=100.00 E-value=2.8e-37 Score=299.52 Aligned_cols=250 Identities=24% Similarity=0.434 Sum_probs=196.5
Q ss_pred ccccccccccccceeEEEEEecCCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCCCCccccce
Q 011360 193 CFASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQIRHRNILPLLA 272 (487)
Q Consensus 193 ~~~~~~~lg~G~~g~v~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~ 272 (487)
.|.....||.|+||.||++.. ..++..||||.+.. ........+.+|+..++.++||||+++++
T Consensus 23 ~~~~~~~lg~g~~g~v~~~~~-~~~~~~vaiK~~~~---------------~~~~~~~~~~~e~~~l~~l~h~~ii~~~~ 86 (292)
T cd06658 23 YLDSFIKIGEGSTGIVCIATE-KHTGKQVAVKKMDL---------------RKQQRRELLFNEVVIMRDYHHENVVDMYN 86 (292)
T ss_pred HHhhhhcccCCCCeEEEEEEE-CCCCCEEEEEEEec---------------chHHHHHHHHHHHHHHHhCCCCcHHHHHH
Confidence 456667899999999999974 45788999998732 11223456788999999999999999999
Q ss_pred EEecCCeeEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCCEE
Q 011360 273 HMVRPDCHLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVLLNDDMEAC 352 (487)
Q Consensus 273 ~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nill~~~~~~k 352 (487)
.+...+..|+||||+++++|.+++.. ..+++..+..++.|++.||.|| |++|++||||||+||+++.++.++
T Consensus 87 ~~~~~~~~~lv~e~~~~~~L~~~~~~-----~~l~~~~~~~~~~qi~~~l~~L---H~~~ivH~dlkp~Nill~~~~~~k 158 (292)
T cd06658 87 SYLVGDELWVVMEFLEGGALTDIVTH-----TRMNEEQIATVCLSVLRALSYL---HNQGVIHRDIKSDSILLTSDGRIK 158 (292)
T ss_pred heecCCeEEEEEeCCCCCcHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHH---HHCCEeecCCCHHHEEEcCCCCEE
Confidence 99999999999999999999998753 4588999999999999999999 777899999999999999999999
Q ss_pred EeccCCccccCCCCceeeEeeecccccccCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCccccCCCCccccHHHHHHH
Q 011360 353 ISDLGLAMAIPDGYTRVLISYVLGTMAYIAPEYFQQPELSEKCDIFSFGMLLISLVRGVPSFVFHQNGEEICSPEWLRKV 432 (487)
Q Consensus 353 l~DFg~s~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DvwslG~~l~elltg~~pf~~~~~~~~~~~~~~~~~~ 432 (487)
|+|||++......... .....|+..|+|||.+.+..++.++||||||+++|||++|..||..... .......
T Consensus 159 L~dfg~~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~------~~~~~~~ 230 (292)
T cd06658 159 LSDFGFCAQVSKEVPK--RKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPPYFNEPP------LQAMRRI 230 (292)
T ss_pred EccCcchhhccccccc--CceeecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH------HHHHHHH
Confidence 9999998755332221 1234588999999999888899999999999999999999999953322 1111111
Q ss_pred HhcCCCCCccCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCChHHHHHH
Q 011360 433 MNSKNPSRAIDPRLPGNGYEKKMLHVLKIAYICTLHDPEERPNSQYVRCR 482 (487)
Q Consensus 433 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~~il~~ 482 (487)
....+ +..+. .......+..++.+||..+|++|||++++++.
T Consensus 231 -~~~~~-----~~~~~--~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~~ 272 (292)
T cd06658 231 -RDNLP-----PRVKD--SHKVSSVLRGFLDLMLVREPSQRATAQELLQH 272 (292)
T ss_pred -HhcCC-----Ccccc--ccccCHHHHHHHHHHccCChhHCcCHHHHhhC
Confidence 11111 11111 11223468889999999999999999999863
No 263
>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I
Probab=100.00 E-value=5e-37 Score=294.50 Aligned_cols=255 Identities=25% Similarity=0.392 Sum_probs=199.1
Q ss_pred ccccccccccccccceeEEEEEecCCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccC-CCCCccc
Q 011360 191 EDCFASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQI-RHRNILP 269 (487)
Q Consensus 191 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpnIv~ 269 (487)
.++|.+.+.||.|++|.||+|... .++..+++|.+.. .......+.+|+.+++++ .||||++
T Consensus 5 ~~~y~~~~~l~~g~~~~v~~~~~~-~~~~~~~~k~~~~----------------~~~~~~~~~~e~~~l~~~~~h~~i~~ 67 (275)
T cd06608 5 TGIFELVEVIGEGTYGKVYKARHK-KTGQLVAIKIMDI----------------IEDEEEEIKEEYNILRKYSNHPNIAT 67 (275)
T ss_pred hhheeheeeecCCCCeEEEEEEEC-CCCcEEEEEEEec----------------CchhHHHHHHHHHHHHHhcCCCChhe
Confidence 357999999999999999999754 4678999998732 112345678899999998 7999999
Q ss_pred cceEEecCC------eeEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCE
Q 011360 270 LLAHMVRPD------CHLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNV 343 (487)
Q Consensus 270 l~~~~~~~~------~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Ni 343 (487)
+++++.... ..++||||+++++|.+++......+..+++..+..++.|++.||.|| |+.|++|+||+|+||
T Consensus 68 ~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~l---H~~~i~H~~l~p~ni 144 (275)
T cd06608 68 FYGAFIKKNPPGNDDQLWLVMELCGGGSVTDLVKGLRKKGKRLKEEWIAYILRETLRGLAYL---HENKVIHRDIKGQNI 144 (275)
T ss_pred EEEEEEecCCCCcceEEEEEEEcCCCCcHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHH---hcCCcccCCCCHHHE
Confidence 999987644 48999999999999999876544456789999999999999999999 788999999999999
Q ss_pred EeCCCCCEEEeccCCccccCCCCceeeEeeecccccccCCcccCC-----CCCCchhHHHHHHHHHHHHHhCCCCccccC
Q 011360 344 LLNDDMEACISDLGLAMAIPDGYTRVLISYVLGTMAYIAPEYFQQ-----PELSEKCDIFSFGMLLISLVRGVPSFVFHQ 418 (487)
Q Consensus 344 ll~~~~~~kl~DFg~s~~~~~~~~~~~~~~~~gt~~y~aPE~l~~-----~~~~~~~DvwslG~~l~elltg~~pf~~~~ 418 (487)
+++.++.++|+|||++......... .....++..|+|||.+.. ..++.++||||||+++|+|++|..||....
T Consensus 145 ~~~~~~~~~l~d~~~~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~ 222 (275)
T cd06608 145 LLTKNAEVKLVDFGVSAQLDSTLGR--RNTFIGTPYWMAPEVIACDEQPDASYDARSDVWSLGITAIELADGKPPLCDMH 222 (275)
T ss_pred EEccCCeEEECCCccceecccchhh--hcCccccccccCHhHhcccccccCCccccccHHHhHHHHHHHHhCCCCccccc
Confidence 9999999999999998765433221 123458899999998753 357889999999999999999999994321
Q ss_pred CCCccccHHHHHHHHhcCCCCCccCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCChHHHHH
Q 011360 419 NGEEICSPEWLRKVMNSKNPSRAIDPRLPGNGYEKKMLHVLKIAYICTLHDPEERPNSQYVRC 481 (487)
Q Consensus 419 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~~il~ 481 (487)
. ........... ... +. .....+..+.+++.+||..||++|||+.++++
T Consensus 223 ~------~~~~~~~~~~~-~~~-----~~--~~~~~~~~~~~li~~~l~~dp~~Rpt~~~ll~ 271 (275)
T cd06608 223 P------MRALFKIPRNP-PPT-----LK--SPENWSKKFNDFISECLIKNYEQRPFMEELLE 271 (275)
T ss_pred h------HHHHHHhhccC-CCC-----CC--chhhcCHHHHHHHHHHhhcChhhCcCHHHHhc
Confidence 1 11122222211 111 11 11224457889999999999999999999975
No 264
>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.3e-38 Score=288.63 Aligned_cols=244 Identities=23% Similarity=0.290 Sum_probs=201.1
Q ss_pred cccccccccccccceeEEEEEecCCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCCCCccccc
Q 011360 192 DCFASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQIRHRNILPLL 271 (487)
Q Consensus 192 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~ 271 (487)
++|..++.||+|.||+|.+++ .+.+++.+|+|+++. .-......+..-..|-.++...+||.+..+.
T Consensus 168 ~dFdfLKvLGkGTFGKVIL~r-EKat~k~YAiKIlkK------------eviiakdEVAHTlTE~RVL~~~~HPFLt~LK 234 (516)
T KOG0690|consen 168 EDFDFLKVLGKGTFGKVILCR-EKATGKLYAIKILKK------------EVIIAKDEVAHTLTENRVLQNCRHPFLTSLK 234 (516)
T ss_pred chhhHHHHhcCCccceEEEEe-ecccCceeehhhhhh------------hheeehHHhhhhhhHHHHHHhccCcHHHHhh
Confidence 458899999999999999997 557999999997732 2334455677788899999999999999999
Q ss_pred eEEecCCeeEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCCE
Q 011360 272 AHMVRPDCHLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVLLNDDMEA 351 (487)
Q Consensus 272 ~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nill~~~~~~ 351 (487)
..|...+.+|+||||+.||.|.-+|.. ...+++...+.+...|+.||.|| |+++||+||||.+|+|++.+|++
T Consensus 235 YsFQt~drlCFVMeyanGGeLf~HLsr----er~FsE~RtRFYGaEIvsAL~YL---Hs~~ivYRDlKLENLlLDkDGHI 307 (516)
T KOG0690|consen 235 YSFQTQDRLCFVMEYANGGELFFHLSR----ERVFSEDRTRFYGAEIVSALGYL---HSRNIVYRDLKLENLLLDKDGHI 307 (516)
T ss_pred hhhccCceEEEEEEEccCceEeeehhh----hhcccchhhhhhhHHHHHHhhhh---hhCCeeeeechhhhheeccCCce
Confidence 999999999999999999999988865 57789999999999999999999 78899999999999999999999
Q ss_pred EEeccCCccccCCCCceeeEeeecccccccCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCccccCCCCccccHHHHHH
Q 011360 352 CISDLGLAMAIPDGYTRVLISYVLGTMAYIAPEYFQQPELSEKCDIFSFGMLLISLVRGVPSFVFHQNGEEICSPEWLRK 431 (487)
Q Consensus 352 kl~DFg~s~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DvwslG~~l~elltg~~pf~~~~~~~~~~~~~~~~~ 431 (487)
||+|||+++.--... ...++++|||.|+|||++....|+.++|+|.+|+++|||++|+.||-..+... ..+.+
T Consensus 308 KitDFGLCKE~I~~g--~t~kTFCGTPEYLAPEVleDnDYgraVDWWG~GVVMYEMmCGRLPFyn~dh~k---LFeLI-- 380 (516)
T KOG0690|consen 308 KITDFGLCKEEIKYG--DTTKTFCGTPEYLAPEVLEDNDYGRAVDWWGVGVVMYEMMCGRLPFYNKDHEK---LFELI-- 380 (516)
T ss_pred Eeeecccchhccccc--ceeccccCChhhcCchhhccccccceeehhhhhHHHHHHHhccCcccccchhH---HHHHH--
Confidence 999999997643322 23468999999999999999999999999999999999999999995443321 11111
Q ss_pred HHhcCCCCCccCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCC
Q 011360 432 VMNSKNPSRAIDPRLPGNGYEKKMLHVLKIAYICTLHDPEERP 474 (487)
Q Consensus 432 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RP 474 (487)
++..-+.+.. + +.+...++...|.+||.+|.
T Consensus 381 l~ed~kFPr~----l--------s~eAktLLsGLL~kdP~kRL 411 (516)
T KOG0690|consen 381 LMEDLKFPRT----L--------SPEAKTLLSGLLKKDPKKRL 411 (516)
T ss_pred HhhhccCCcc----C--------CHHHHHHHHHHhhcChHhhc
Confidence 1112111111 1 23577888999999999996
No 265
>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with
Probab=100.00 E-value=8.7e-37 Score=289.89 Aligned_cols=251 Identities=22% Similarity=0.352 Sum_probs=200.2
Q ss_pred ccccccccccccceeEEEEEecCCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCCCCccccce
Q 011360 193 CFASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQIRHRNILPLLA 272 (487)
Q Consensus 193 ~~~~~~~lg~G~~g~v~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~ 272 (487)
+|...+.||.|++|.||++.. ..++..+|+|.+... .........+.+|+.+++.++||||+++++
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~-~~~~~~~~ik~~~~~-------------~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~ 66 (256)
T cd08220 1 KYEKIRVVGRGAFGIVHLCRR-KADQKLVIIKQIPVE-------------QMTKDERLAAQNECQVLKLLSHPNIIEYYE 66 (256)
T ss_pred CceEEEEecccCceEEEEEEE-cCCCcEEEEEEEecc-------------ccccHHHHHHHHHHHHHhhCCCCchhheee
Confidence 378889999999999999975 457889999987431 112234567888999999999999999999
Q ss_pred EEecCCeeEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCC-CE
Q 011360 273 HMVRPDCHLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVLLNDDM-EA 351 (487)
Q Consensus 273 ~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nill~~~~-~~ 351 (487)
.+...+..++||||+++++|.+++.. .....+++..+..++.+++.||.|| |++|++|+||+|+||+++.++ .+
T Consensus 67 ~~~~~~~~~lv~e~~~~~~L~~~~~~--~~~~~~~~~~~~~~~~~i~~~l~~l---h~~~i~h~dl~~~nil~~~~~~~~ 141 (256)
T cd08220 67 NFLEDKALMIVMEYAPGGTLAEYIQK--RCNSLLDEDTILHFFVQILLALHHV---HTKLILHRDLKTQNILLDKHKMVV 141 (256)
T ss_pred eEecCCEEEEEEecCCCCCHHHHHHH--hcccCCCHHHHHHHHHHHHHHHHHH---HhCCeecCCCCHHHEEEcCCCCEE
Confidence 99999999999999999999999975 2345688999999999999999999 778999999999999998654 57
Q ss_pred EEeccCCccccCCCCceeeEeeecccccccCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCccccCCCCccccHHHHHH
Q 011360 352 CISDLGLAMAIPDGYTRVLISYVLGTMAYIAPEYFQQPELSEKCDIFSFGMLLISLVRGVPSFVFHQNGEEICSPEWLRK 431 (487)
Q Consensus 352 kl~DFg~s~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DvwslG~~l~elltg~~pf~~~~~~~~~~~~~~~~~ 431 (487)
+|+|||.+......... ....++..|+|||.+.+..++.++||||||+++|+|++|..||..... ......
T Consensus 142 ~l~d~~~~~~~~~~~~~---~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~------~~~~~~ 212 (256)
T cd08220 142 KIGDFGISKILSSKSKA---YTVVGTPCYISPELCEGKPYNQKSDIWALGCVLYELASLKRAFEAANL------PALVLK 212 (256)
T ss_pred EEccCCCceecCCCccc---cccccCCcccCchhccCCCCCcccchHHHHHHHHHHHhCCCCcccCch------HHHHHH
Confidence 99999999876543221 234588899999999988889999999999999999999999943321 222222
Q ss_pred HHhcCCCCCccCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCChHHHHH
Q 011360 432 VMNSKNPSRAIDPRLPGNGYEKKMLHVLKIAYICTLHDPEERPNSQYVRC 481 (487)
Q Consensus 432 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~~il~ 481 (487)
....... .+... .+.++.+++.+||+.+|++|||+.++++
T Consensus 213 ~~~~~~~--~~~~~--------~~~~l~~li~~~l~~~p~~Rpt~~~ll~ 252 (256)
T cd08220 213 IMSGTFA--PISDR--------YSPDLRQLILSMLNLDPSKRPQLSQIMA 252 (256)
T ss_pred HHhcCCC--CCCCC--------cCHHHHHHHHHHccCChhhCCCHHHHhh
Confidence 2222111 11111 2346889999999999999999999985
No 266
>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as
Probab=100.00 E-value=2.7e-37 Score=303.21 Aligned_cols=200 Identities=24% Similarity=0.378 Sum_probs=158.7
Q ss_pred cccccccceeEEEEEec-CCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCCCCccccceEEec
Q 011360 198 EKIGSGGCGEVYKAELP-GSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQIRHRNILPLLAHMVR 276 (487)
Q Consensus 198 ~~lg~G~~g~v~~~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~ 276 (487)
..||.|+||.||+|+.. ..++..||+|.+... .....+.+|+.+++.++||||+++++++..
T Consensus 7 ~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~-----------------~~~~~~~~E~~~l~~l~h~niv~~~~~~~~ 69 (317)
T cd07867 7 CKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGT-----------------GISMSACREIALLRELKHPNVIALQKVFLS 69 (317)
T ss_pred eEeccCCCeeEEEEEecCCCccceEEEEEecCC-----------------CCcHHHHHHHHHHHhCCCCCeeeEEEEEec
Confidence 57999999999999863 235678999987321 112345679999999999999999998854
Q ss_pred --CCeeEEEEEecCCCCHHHHHhhhhc-----CCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEe----
Q 011360 277 --PDCHLLVYEFMKNGSLQDILDDVSR-----GRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVLL---- 345 (487)
Q Consensus 277 --~~~~~lv~E~~~~gsL~~~l~~~~~-----~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nill---- 345 (487)
+...++||||+. ++|.+++..... ....+++..+..++.|++.||.|| |+.||+||||||+||++
T Consensus 70 ~~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~l---H~~~ivH~Dlkp~Nil~~~~~ 145 (317)
T cd07867 70 HSDRKVWLLFDYAE-HDLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYL---HANWVLHRDLKPANILVMGEG 145 (317)
T ss_pred cCCCeEEEEEeeeC-CcHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHH---HhCCEEcCCCCHHHEEEccCC
Confidence 567899999995 588887753211 223578889999999999999999 77889999999999999
Q ss_pred CCCCCEEEeccCCccccCCCCce-eeEeeecccccccCCcccCC-CCCCchhHHHHHHHHHHHHHhCCCCccccC
Q 011360 346 NDDMEACISDLGLAMAIPDGYTR-VLISYVLGTMAYIAPEYFQQ-PELSEKCDIFSFGMLLISLVRGVPSFVFHQ 418 (487)
Q Consensus 346 ~~~~~~kl~DFg~s~~~~~~~~~-~~~~~~~gt~~y~aPE~l~~-~~~~~~~DvwslG~~l~elltg~~pf~~~~ 418 (487)
+.++.+||+|||+++........ .......||+.|+|||++.+ ..++.++|||||||++|||+||.+||....
T Consensus 146 ~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~el~tg~~~f~~~~ 220 (317)
T cd07867 146 PERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQ 220 (317)
T ss_pred CCCCcEEEeeccceeccCCCcccccccCcceecccccCcHHhcCCCccCcHHHHHhHHHHHHHHHhCCCCccccc
Confidence 45678999999999876443221 11133468999999999876 458999999999999999999999996543
No 267
>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i
Probab=100.00 E-value=3.9e-37 Score=299.26 Aligned_cols=249 Identities=23% Similarity=0.385 Sum_probs=196.4
Q ss_pred ccccccccccccceeEEEEEecCCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCCCCccccce
Q 011360 193 CFASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQIRHRNILPLLA 272 (487)
Q Consensus 193 ~~~~~~~lg~G~~g~v~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~ 272 (487)
.|.....||.|+||.||++.. ..++..||+|.+... .......+.+|+.++..+.||||+++++
T Consensus 22 ~~~~~~~ig~g~~g~v~~~~~-~~~~~~v~iK~~~~~---------------~~~~~~~~~~e~~~l~~l~hp~i~~~~~ 85 (297)
T cd06659 22 LLENYIKIGEGSTGIVCIARE-KHSGRQVAVKMMDLR---------------KQQRRELLFNEVVIMRDYQHQNVVEMYK 85 (297)
T ss_pred hHHhhhhcCCCCceeEEEEEE-cCCCCEEEEEEEEec---------------ccchHHHHHHHHHHHHhCCCCchhhhhh
Confidence 355566899999999999974 457889999987321 1122345778999999999999999999
Q ss_pred EEecCCeeEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCCEE
Q 011360 273 HMVRPDCHLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVLLNDDMEAC 352 (487)
Q Consensus 273 ~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nill~~~~~~k 352 (487)
.+..++..|++|||+++++|..++.. ..+++..+..++.|++.||.|| |+.|++||||+|+||+++.++.++
T Consensus 86 ~~~~~~~~~iv~e~~~~~~L~~~~~~-----~~~~~~~~~~~~~qi~~~L~~L---H~~~ivH~dl~p~Nill~~~~~~k 157 (297)
T cd06659 86 SYLVGEELWVLMEFLQGGALTDIVSQ-----TRLNEEQIATVCESVLQALCYL---HSQGVIHRDIKSDSILLTLDGRVK 157 (297)
T ss_pred heeeCCeEEEEEecCCCCCHHHHHhh-----cCCCHHHHHHHHHHHHHHHHHH---HhCCeecCCCCHHHeEEccCCcEE
Confidence 99999999999999999999987753 4588999999999999999999 788899999999999999999999
Q ss_pred EeccCCccccCCCCceeeEeeecccccccCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCccccCCCCccccHHHHHHH
Q 011360 353 ISDLGLAMAIPDGYTRVLISYVLGTMAYIAPEYFQQPELSEKCDIFSFGMLLISLVRGVPSFVFHQNGEEICSPEWLRKV 432 (487)
Q Consensus 353 l~DFg~s~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DvwslG~~l~elltg~~pf~~~~~~~~~~~~~~~~~~ 432 (487)
|+|||++......... .....++..|+|||++.+..++.++||||||+++|+|++|..||..... .+.....
T Consensus 158 L~dfg~~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~------~~~~~~~ 229 (297)
T cd06659 158 LSDFGFCAQISKDVPK--RKSLVGTPYWMAPEVISRTPYGTEVDIWSLGIMVIEMVDGEPPYFSDSP------VQAMKRL 229 (297)
T ss_pred EeechhHhhccccccc--ccceecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH------HHHHHHH
Confidence 9999998755433221 1335689999999999988899999999999999999999999953221 1222222
Q ss_pred HhcCCCCCccCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCChHHHHH
Q 011360 433 MNSKNPSRAIDPRLPGNGYEKKMLHVLKIAYICTLHDPEERPNSQYVRC 481 (487)
Q Consensus 433 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~~il~ 481 (487)
.....+.... .......+.+++.+||+.+|++|||+.++++
T Consensus 230 ~~~~~~~~~~--------~~~~~~~l~~~i~~~l~~~P~~Rps~~~ll~ 270 (297)
T cd06659 230 RDSPPPKLKN--------AHKISPVLRDFLERMLTREPQERATAQELLD 270 (297)
T ss_pred hccCCCCccc--------cCCCCHHHHHHHHHHhcCCcccCcCHHHHhh
Confidence 1111111110 1112345889999999999999999999987
No 268
>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea
Probab=100.00 E-value=3.8e-37 Score=297.01 Aligned_cols=252 Identities=26% Similarity=0.391 Sum_probs=193.8
Q ss_pred ccccccccccccccceeEEEEEecCCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccC-CCCCccc
Q 011360 191 EDCFASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQI-RHRNILP 269 (487)
Q Consensus 191 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpnIv~ 269 (487)
.+.|++.+.||.|+||.||+|... .++..+|+|.+.. .......+..|+.++.++ +||||++
T Consensus 15 ~~~~~~~~~lg~g~~~~v~~~~~~-~~~~~~a~K~~~~----------------~~~~~~~~~~e~~~l~~~~~h~~i~~ 77 (282)
T cd06636 15 AGIFELVEVVGNGTYGQVYKGRHV-KTGQLAAIKVMDV----------------TEDEEEEIKLEINMLKKYSHHRNIAT 77 (282)
T ss_pred hhhhhhheeeccCCCeEEEEEEEc-CCCcEEEEEEEec----------------ChHHHHHHHHHHHHHHHhcCCCcEEE
Confidence 346899999999999999999754 5788999998732 112334567788888888 7999999
Q ss_pred cceEEec------CCeeEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCE
Q 011360 270 LLAHMVR------PDCHLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNV 343 (487)
Q Consensus 270 l~~~~~~------~~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Ni 343 (487)
+++++.. .+..|++|||+++|+|.+++... ....+++..+..++.|++.||.|| |+.|++|+||+|+||
T Consensus 78 ~~~~~~~~~~~~~~~~~~iv~e~~~~~~L~~~~~~~--~~~~~~~~~~~~~~~qi~~al~~L---H~~~ivH~dl~~~ni 152 (282)
T cd06636 78 YYGAFIKKSPPGHDDQLWLVMEFCGAGSVTDLVKNT--KGNALKEDWIAYICREILRGLAHL---HAHKVIHRDIKGQNV 152 (282)
T ss_pred EeeehhcccccCCCCEEEEEEEeCCCCcHHHHHHHc--cCCCCCHHHHHHHHHHHHHHHHHH---HHCCcccCCCCHHHE
Confidence 9998853 45789999999999999998752 234578888999999999999999 778899999999999
Q ss_pred EeCCCCCEEEeccCCccccCCCCceeeEeeecccccccCCcccC-----CCCCCchhHHHHHHHHHHHHHhCCCCccccC
Q 011360 344 LLNDDMEACISDLGLAMAIPDGYTRVLISYVLGTMAYIAPEYFQ-----QPELSEKCDIFSFGMLLISLVRGVPSFVFHQ 418 (487)
Q Consensus 344 ll~~~~~~kl~DFg~s~~~~~~~~~~~~~~~~gt~~y~aPE~l~-----~~~~~~~~DvwslG~~l~elltg~~pf~~~~ 418 (487)
+++.++.++|+|||++......... .....|++.|+|||.+. ...++.++|+||||+++|+|++|..||....
T Consensus 153 li~~~~~~~l~dfg~~~~~~~~~~~--~~~~~~~~~y~aPE~l~~~~~~~~~~~~~~DvwslG~~l~el~~g~~p~~~~~ 230 (282)
T cd06636 153 LLTENAEVKLVDFGVSAQLDRTVGR--RNTFIGTPYWMAPEVIACDENPDATYDYRSDIWSLGITAIEMAEGAPPLCDMH 230 (282)
T ss_pred EECCCCCEEEeeCcchhhhhccccC--CCcccccccccCHhhcCcccCcCcCCCcccchhHHHHHHHHHHhCCCCccccC
Confidence 9999999999999998765322111 12345889999999886 3468889999999999999999999994332
Q ss_pred CCCccccHHHHHHHHhcCCCCCccCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCChHHHHH
Q 011360 419 NGEEICSPEWLRKVMNSKNPSRAIDPRLPGNGYEKKMLHVLKIAYICTLHDPEERPNSQYVRC 481 (487)
Q Consensus 419 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~~il~ 481 (487)
+.. ...... ...+... .....+..+.+++.+||+.||.+|||+.+|+.
T Consensus 231 ~~~------~~~~~~-~~~~~~~--------~~~~~~~~~~~li~~cl~~~p~~Rp~~~ell~ 278 (282)
T cd06636 231 PMR------ALFLIP-RNPPPKL--------KSKKWSKKFIDFIEGCLVKNYLSRPSTEQLLK 278 (282)
T ss_pred HHh------hhhhHh-hCCCCCC--------cccccCHHHHHHHHHHhCCChhhCcCHHHHhc
Confidence 211 111111 1111111 11123356899999999999999999999874
No 269
>PHA03210 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=5e-37 Score=318.36 Aligned_cols=281 Identities=19% Similarity=0.205 Sum_probs=192.9
Q ss_pred cccccccccccccceeEEEEEecCCCCceEEEEEeeecC--chhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCCCCccc
Q 011360 192 DCFASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIVYA--PISAAELIEEDSKLRDSKLRQIRSEIITASQIRHRNILP 269 (487)
Q Consensus 192 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~ 269 (487)
+.|.+++.||+|+||+||++.++..++...++|.+.... .........+...........+.+|+.++.+++||||++
T Consensus 148 ~~Y~ii~~LG~G~fG~Vyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~Ei~il~~l~HpnIv~ 227 (501)
T PHA03210 148 AHFRVIDDLPAGAFGKIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKRVKAGSRAAIQLENEILALGRLNHENILK 227 (501)
T ss_pred hccEEEeEecCCCCcceEEEEEeccchhhhhhhccccccccchhhhhhHhHHhhcchHHHHHHHHHHHHHHhCCCCCcCc
Confidence 569999999999999999998765555544444221111 011111122222223345567889999999999999999
Q ss_pred cceEEecCCeeEEEEEecCCCCHHHHHhhhhc-CCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCC
Q 011360 270 LLAHMVRPDCHLLVYEFMKNGSLQDILDDVSR-GRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVLLNDD 348 (487)
Q Consensus 270 l~~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~-~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nill~~~ 348 (487)
+++++...+..|++++++ +++|.+++..... .........+..++.|++.||.|| |++||+||||||+|||++.+
T Consensus 228 l~~~~~~~~~~~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~aL~yL---H~~gIiHrDLKP~NILl~~~ 303 (501)
T PHA03210 228 IEEILRSEANTYMITQKY-DFDLYSFMYDEAFDWKDRPLLKQTRAIMKQLLCAVEYI---HDKKLIHRDIKLENIFLNCD 303 (501)
T ss_pred EeEEEEECCeeEEEEecc-ccCHHHHHhhccccccccccHHHHHHHHHHHHHHHHHH---HhCCeecCCCCHHHEEECCC
Confidence 999999999999999999 5577777643111 122234566788999999999999 77899999999999999999
Q ss_pred CCEEEeccCCccccCCCCceeeEeeecccccccCCcccCCCCCCchhHHHHHHHHHHHHHhCCC-CccccCCCCccccHH
Q 011360 349 MEACISDLGLAMAIPDGYTRVLISYVLGTMAYIAPEYFQQPELSEKCDIFSFGMLLISLVRGVP-SFVFHQNGEEICSPE 427 (487)
Q Consensus 349 ~~~kl~DFg~s~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DvwslG~~l~elltg~~-pf~~~~~~~~~~~~~ 427 (487)
+.+||+|||++..+....... .....||+.|+|||++.+..++.++|||||||++|||++|.. ||....... ..
T Consensus 304 ~~vkL~DFGla~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~~~~~p~~~~~~~~----~~ 378 (501)
T PHA03210 304 GKIVLGDFGTAMPFEKEREAF-DYGWVGTVATNSPEILAGDGYCEITDIWSCGLILLDMLSHDFCPIGDGGGKP----GK 378 (501)
T ss_pred CCEEEEeCCCceecCcccccc-cccccCCcCCCCchhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCccCCCCCH----HH
Confidence 999999999998765432211 123569999999999999999999999999999999999865 443221111 01
Q ss_pred HHHHHHhcCC-CCCccC-------------------CCCCCC-CcHHHHHHHHHHHhhccCCCCCCCCChHHHHH
Q 011360 428 WLRKVMNSKN-PSRAID-------------------PRLPGN-GYEKKMLHVLKIAYICTLHDPEERPNSQYVRC 481 (487)
Q Consensus 428 ~~~~~~~~~~-~~~~~~-------------------~~~~~~-~~~~~~~~l~~li~~cl~~~P~~RPs~~~il~ 481 (487)
.+........ ....++ ..++.. .......++.+++.+||+.||++|||+.++++
T Consensus 379 ~~~~~~~~~~~~~~~~p~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~li~kmL~~DP~~Rpsa~elL~ 453 (501)
T PHA03210 379 QLLKIIDSLSVCDEEFPDPPCKLFDYIDSAEIDHAGHSVPPLIRNLGLPADFEYPLVKMLTFDWHLRPGAAELLA 453 (501)
T ss_pred HHHHHHHhcccChhhcCCcHHHHHHHhhhhhcccCccchhhHHHhcCCChHHHHHHHHHhccCcccCcCHHHHhh
Confidence 1111111000 000000 000000 00011235677899999999999999999985
No 270
>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6. Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs
Probab=100.00 E-value=6.6e-37 Score=295.37 Aligned_cols=253 Identities=23% Similarity=0.372 Sum_probs=193.0
Q ss_pred ccccccccccccceeEEEEEecCCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHH-hccCCCCCccccc
Q 011360 193 CFASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIIT-ASQIRHRNILPLL 271 (487)
Q Consensus 193 ~~~~~~~lg~G~~g~v~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~-l~~l~hpnIv~l~ 271 (487)
+|.+.+.||.|+||.||++.. ..+|+.||+|++.... . ......+..|... ++.+.||||++++
T Consensus 2 ~~~~~~~ig~g~~g~v~~~~~-~~~~~~vaiK~~~~~~-------------~-~~~~~~~~~e~~~~~~~~~~~~iv~~~ 66 (283)
T cd06617 2 DLEVIEELGRGAYGVVDKMRH-VPTGTIMAVKRIRATV-------------N-SQEQKRLLMDLDISMRSVDCPYTVTFY 66 (283)
T ss_pred CceEEEEecccCCeEEEEEEE-cCCCcEEEEEEEecCC-------------C-cHHHHHHHHHHHHHHHHcCCCCeeeee
Confidence 588999999999999999975 4579999999874311 1 1112233445443 5667999999999
Q ss_pred eEEecCCeeEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCC-CeeecCCCCCCEEeCCCCC
Q 011360 272 AHMVRPDCHLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSA-SIIHGDIKPRNVLLNDDME 350 (487)
Q Consensus 272 ~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~-givH~Dlkp~Nill~~~~~ 350 (487)
+++..++..|++|||++ |+|.+++.........+++..++.++.|++.||.|| |++ +++||||||+||+++.++.
T Consensus 67 ~~~~~~~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~l---H~~~~i~h~dlkp~nil~~~~~~ 142 (283)
T cd06617 67 GALFREGDVWICMEVMD-TSLDKFYKKVYDKGLTIPEDILGKIAVSIVKALEYL---HSKLSVIHRDVKPSNVLINRNGQ 142 (283)
T ss_pred EEEecCCcEEEEhhhhc-ccHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHH---hhcCCeecCCCCHHHEEECCCCC
Confidence 99999999999999995 689888876444456789999999999999999999 665 8999999999999999999
Q ss_pred EEEeccCCccccCCCCceeeEeeecccccccCCcccCC----CCCCchhHHHHHHHHHHHHHhCCCCccccCCCCccccH
Q 011360 351 ACISDLGLAMAIPDGYTRVLISYVLGTMAYIAPEYFQQ----PELSEKCDIFSFGMLLISLVRGVPSFVFHQNGEEICSP 426 (487)
Q Consensus 351 ~kl~DFg~s~~~~~~~~~~~~~~~~gt~~y~aPE~l~~----~~~~~~~DvwslG~~l~elltg~~pf~~~~~~~~~~~~ 426 (487)
+||+|||++......... ....++..|+|||.+.+ ..++.++|+||||+++|+|++|..||..... ..
T Consensus 143 ~kl~dfg~~~~~~~~~~~---~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~-----~~ 214 (283)
T cd06617 143 VKLCDFGISGYLVDSVAK---TIDAGCKPYMAPERINPELNQKGYDVKSDVWSLGITMIELATGRFPYDSWKT-----PF 214 (283)
T ss_pred EEEeeccccccccccccc---ccccCCccccChhhcCCcccccccCccccchhhHHHHHHHHhCCCCCCcccc-----CH
Confidence 999999998765432211 22457889999998864 4568899999999999999999999943211 11
Q ss_pred HHHHHHHhcCCCCCccCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCChHHHHH
Q 011360 427 EWLRKVMNSKNPSRAIDPRLPGNGYEKKMLHVLKIAYICTLHDPEERPNSQYVRC 481 (487)
Q Consensus 427 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~~il~ 481 (487)
+..........+ .++.. ..+.++.+++.+||..+|++|||+.++++
T Consensus 215 ~~~~~~~~~~~~------~~~~~---~~~~~l~~li~~~l~~~p~~Rp~~~~il~ 260 (283)
T cd06617 215 QQLKQVVEEPSP------QLPAE---KFSPEFQDFVNKCLKKNYKERPNYPELLQ 260 (283)
T ss_pred HHHHHHHhcCCC------CCCcc---ccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 222222222111 11111 13356889999999999999999999985
No 271
>smart00219 TyrKc Tyrosine kinase, catalytic domain. Phosphotransferases. Tyrosine-specific kinase subfamily.
Probab=100.00 E-value=1.1e-36 Score=289.41 Aligned_cols=253 Identities=27% Similarity=0.408 Sum_probs=198.5
Q ss_pred ccccccccccceeEEEEEecCCC---CceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCCCCccccc
Q 011360 195 ASLEKIGSGGCGEVYKAELPGSN---GKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQIRHRNILPLL 271 (487)
Q Consensus 195 ~~~~~lg~G~~g~v~~~~~~~~~---~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~ 271 (487)
.+.+.||.|+||.||++...... +..||+|.+... ........+..|+..+..++||||++++
T Consensus 2 ~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~--------------~~~~~~~~~~~e~~~l~~l~~~~i~~~~ 67 (258)
T smart00219 2 TLGKKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKED--------------ADEQQIEEFLREARIMRKLDHPNIVKLL 67 (258)
T ss_pred cccceeccCCCcceEEEEecCCCCCCCceEEEEEccCC--------------CChHHHHHHHHHHHHHHhcCCCchheEE
Confidence 56788999999999999875322 488999987321 1112456788899999999999999999
Q ss_pred eEEecCCeeEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCCE
Q 011360 272 AHMVRPDCHLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVLLNDDMEA 351 (487)
Q Consensus 272 ~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nill~~~~~~ 351 (487)
+++...+..+++|||+++++|.+++... ....+++..+..++.|++.||+|| |+.|++|+||+|+||+++.++.+
T Consensus 68 ~~~~~~~~~~~i~e~~~~~~l~~~~~~~--~~~~~~~~~~~~~~~ql~~~l~~l---h~~~~~h~dl~~~nil~~~~~~~ 142 (258)
T smart00219 68 GVCTEEEPLMIVMEYMEGGDLLDYLRKN--RPKELSLSDLLSFALQIARGMEYL---ESKNFIHRDLAARNCLVGENLVV 142 (258)
T ss_pred EEEcCCCeeEEEEeccCCCCHHHHHHhh--hhccCCHHHHHHHHHHHHHHHHHH---hcCCeeecccccceEEEccCCeE
Confidence 9999999999999999999999998752 112289999999999999999999 78899999999999999999999
Q ss_pred EEeccCCccccCCCCceeeEeeecccccccCCcccCCCCCCchhHHHHHHHHHHHHHh-CCCCccccCCCCccccHHHHH
Q 011360 352 CISDLGLAMAIPDGYTRVLISYVLGTMAYIAPEYFQQPELSEKCDIFSFGMLLISLVR-GVPSFVFHQNGEEICSPEWLR 430 (487)
Q Consensus 352 kl~DFg~s~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DvwslG~~l~ellt-g~~pf~~~~~~~~~~~~~~~~ 430 (487)
+|+|||++........... ....+++.|+|||.+.+..++.++|+||||+++|+|++ |.+||... .......
T Consensus 143 ~l~dfg~~~~~~~~~~~~~-~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~i~~~l~~~g~~p~~~~------~~~~~~~ 215 (258)
T smart00219 143 KISDFGLSRDLYDDDYYKK-KGGKLPIRWMAPESLKDGKFTSKSDVWSFGVLLWEIFTLGESPYPGM------SNEEVLE 215 (258)
T ss_pred EEcccCCceeccccccccc-ccCCCcccccChHHhccCCCCcchhHHHHHHHHHHHHhCCCCCCCCC------CHHHHHH
Confidence 9999999977654422111 12236789999999988889999999999999999998 78888432 2222223
Q ss_pred HHHhcCCCCCccCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCChHHHHHHH
Q 011360 431 KVMNSKNPSRAIDPRLPGNGYEKKMLHVLKIAYICTLHDPEERPNSQYVRCRL 483 (487)
Q Consensus 431 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~~il~~L 483 (487)
.......+ . .+. ..+.++.+++.+||..+|++|||+.++++.|
T Consensus 216 ~~~~~~~~--~----~~~----~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~~l 258 (258)
T smart00219 216 YLKKGYRL--P----KPE----NCPPEIYKLMLQCWAEDPEDRPTFSELVEIL 258 (258)
T ss_pred HHhcCCCC--C----CCC----cCCHHHHHHHHHHCcCChhhCcCHHHHHhhC
Confidence 22222211 1 111 1345688999999999999999999998864
No 272
>PTZ00284 protein kinase; Provisional
Probab=100.00 E-value=4.7e-37 Score=317.12 Aligned_cols=261 Identities=20% Similarity=0.247 Sum_probs=184.4
Q ss_pred ccccccccccccccceeEEEEEecCCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhcc------CCC
Q 011360 191 EDCFASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQ------IRH 264 (487)
Q Consensus 191 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~------l~h 264 (487)
.++|.+.+.||.|+||+||+|.. ..+++.||||++... .........|+.++.. ..|
T Consensus 128 ~~~y~i~~~lG~G~fg~V~~a~~-~~~~~~vAvK~i~~~----------------~~~~~~~~~e~~~l~~l~~~~~~~~ 190 (467)
T PTZ00284 128 TQRFKILSLLGEGTFGKVVEAWD-RKRKEYCAVKIVRNV----------------PKYTRDAKIEIQFMEKVRQADPADR 190 (467)
T ss_pred CCcEEEEEEEEeccCEEEEEEEE-cCCCeEEEEEEEecc----------------hhhHHHHHHHHHHHHHHhhcCcccC
Confidence 45799999999999999999975 457889999988421 0111222334444433 356
Q ss_pred CCccccceEEecC-CeeEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCC-CCeeecCCCCCC
Q 011360 265 RNILPLLAHMVRP-DCHLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHS-ASIIHGDIKPRN 342 (487)
Q Consensus 265 pnIv~l~~~~~~~-~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~-~givH~Dlkp~N 342 (487)
++++++++++... ..+|+|||++ |++|.+++.. ...+++..+..++.||+.||.|| |+ .|||||||||+|
T Consensus 191 ~~i~~i~~~~~~~~~~~~iv~~~~-g~~l~~~l~~----~~~l~~~~~~~i~~qi~~aL~yL---H~~~gIiHrDlKP~N 262 (467)
T PTZ00284 191 FPLMKIQRYFQNETGHMCIVMPKY-GPCLLDWIMK----HGPFSHRHLAQIIFQTGVALDYF---HTELHLMHTDLKPEN 262 (467)
T ss_pred cceeeeEEEEEcCCceEEEEEecc-CCCHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHH---HhcCCeecCCCCHHH
Confidence 6789999888764 5788999998 7889888864 35689999999999999999999 54 589999999999
Q ss_pred EEeCCCC----------------CEEEeccCCccccCCCCceeeEeeecccccccCCcccCCCCCCchhHHHHHHHHHHH
Q 011360 343 VLLNDDM----------------EACISDLGLAMAIPDGYTRVLISYVLGTMAYIAPEYFQQPELSEKCDIFSFGMLLIS 406 (487)
Q Consensus 343 ill~~~~----------------~~kl~DFg~s~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DvwslG~~l~e 406 (487)
||++.++ .+||+|||.+...... .....||+.|+|||++.+..|+.++|||||||++||
T Consensus 263 ILl~~~~~~~~~~~~~~~~~~~~~vkl~DfG~~~~~~~~-----~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvil~e 337 (467)
T PTZ00284 263 ILMETSDTVVDPVTNRALPPDPCRVRICDLGGCCDERHS-----RTAIVSTRHYRSPEVVLGLGWMYSTDMWSMGCIIYE 337 (467)
T ss_pred EEEecCCcccccccccccCCCCceEEECCCCccccCccc-----cccccCCccccCcHHhhcCCCCcHHHHHHHHHHHHH
Confidence 9998765 4999999987643222 134579999999999999999999999999999999
Q ss_pred HHhCCCCccccCCCCccc---------cHHHHH--------HHHhc-CCCCCccCCC----CCC---CCcHHHHHHHHHH
Q 011360 407 LVRGVPSFVFHQNGEEIC---------SPEWLR--------KVMNS-KNPSRAIDPR----LPG---NGYEKKMLHVLKI 461 (487)
Q Consensus 407 lltg~~pf~~~~~~~~~~---------~~~~~~--------~~~~~-~~~~~~~~~~----~~~---~~~~~~~~~l~~l 461 (487)
|++|++||.......... ..+|.. .+... .......++. +.. .........+.++
T Consensus 338 lltG~~pf~~~~~~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dl 417 (467)
T PTZ00284 338 LYTGKLLYDTHDNLEHLHLMEKTLGRLPSEWAGRCGTEEARLLYNSAGQLRPCTDPKHLARIARARPVREVIRDDLLCDL 417 (467)
T ss_pred HHhCCCCCCCCChHHHHHHHHHHcCCCCHHHHhhccchhHHHHhhhcccccccCCHHHHHhhhcccchhhhhchHHHHHH
Confidence 999999996543211000 001100 00000 0000000000 000 0000113457899
Q ss_pred HhhccCCCCCCCCChHHHHH
Q 011360 462 AYICTLHDPEERPNSQYVRC 481 (487)
Q Consensus 462 i~~cl~~~P~~RPs~~~il~ 481 (487)
|.+||+.||++|||+.++++
T Consensus 418 i~~mL~~dP~~R~ta~e~L~ 437 (467)
T PTZ00284 418 IYGLLHYDRQKRLNARQMTT 437 (467)
T ss_pred HHHhCCcChhhCCCHHHHhc
Confidence 99999999999999999986
No 273
>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase. Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1
Probab=100.00 E-value=7e-37 Score=292.29 Aligned_cols=258 Identities=30% Similarity=0.450 Sum_probs=203.2
Q ss_pred ccccccccccccceeEEEEEecCCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCCCCccccce
Q 011360 193 CFASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQIRHRNILPLLA 272 (487)
Q Consensus 193 ~~~~~~~lg~G~~g~v~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~ 272 (487)
+|++.+.||.|+||.||+|... .++..+++|++.. .........+.+|+..++.++||||+++++
T Consensus 2 ~y~~~~~lg~g~~~~v~~~~~~-~~~~~~~ik~~~~--------------~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~ 66 (267)
T cd06610 2 DYELIEVIGVGATAVVYAAICL-PNNEKVAIKRIDL--------------EKCQTSVDELRKEVQAMSQCNHPNVVKYYT 66 (267)
T ss_pred cceeeeeecCCCCeEEEEEEEc-CCCcEEEEEEecc--------------CCcchHHHHHHHHHHHHHhcCCCCEEEEEE
Confidence 5889999999999999999753 4788999998732 111124567889999999999999999999
Q ss_pred EEecCCeeEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCCEE
Q 011360 273 HMVRPDCHLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVLLNDDMEAC 352 (487)
Q Consensus 273 ~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nill~~~~~~k 352 (487)
.+..++..+++||++++++|.+++..... ...+++..+..++.|++.||.|| |+.|++||||+|+||++++++.++
T Consensus 67 ~~~~~~~~~iv~e~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~ql~~al~~l---h~~~i~h~~l~p~ni~~~~~~~~~ 142 (267)
T cd06610 67 SFVVGDELWLVMPYLSGGSLLDIMKSSYP-RGGLDEAIIATVLKEVLKGLEYL---HSNGQIHRDIKAGNILLGEDGSVK 142 (267)
T ss_pred EEeeCCEEEEEEeccCCCcHHHHHHHhcc-cCCCCHHHHHHHHHHHHHHHHHH---HhCCeecCCCCHHhEEEcCCCCEE
Confidence 99999999999999999999999875211 25688999999999999999999 788999999999999999999999
Q ss_pred EeccCCccccCCCCcee--eEeeecccccccCCcccCCC-CCCchhHHHHHHHHHHHHHhCCCCccccCCCCccccHHHH
Q 011360 353 ISDLGLAMAIPDGYTRV--LISYVLGTMAYIAPEYFQQP-ELSEKCDIFSFGMLLISLVRGVPSFVFHQNGEEICSPEWL 429 (487)
Q Consensus 353 l~DFg~s~~~~~~~~~~--~~~~~~gt~~y~aPE~l~~~-~~~~~~DvwslG~~l~elltg~~pf~~~~~~~~~~~~~~~ 429 (487)
|+|||++.......... ......|+..|+|||.+... .++.++|+||||+++|+|++|..||...... ...
T Consensus 143 l~df~~~~~~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~------~~~ 216 (267)
T cd06610 143 IADFGVSASLADGGDRTRKVRKTFVGTPCWMAPEVMEQVHGYDFKADIWSFGITAIELATGAAPYSKYPPM------KVL 216 (267)
T ss_pred EcccchHHHhccCccccccccccccCChhhcChHHHccccCcCcccchHhHhHHHHHHHhCCCCccccChh------hhH
Confidence 99999987665433221 12334588999999998876 7899999999999999999999999543221 122
Q ss_pred HHHHhcCCCCCccCCCCCCC-CcHHHHHHHHHHHhhccCCCCCCCCChHHHHH
Q 011360 430 RKVMNSKNPSRAIDPRLPGN-GYEKKMLHVLKIAYICTLHDPEERPNSQYVRC 481 (487)
Q Consensus 430 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~li~~cl~~~P~~RPs~~~il~ 481 (487)
........+ .++.. .....+..+.+++.+||..||++|||+.+|+.
T Consensus 217 ~~~~~~~~~------~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~ll~ 263 (267)
T cd06610 217 MLTLQNDPP------SLETGADYKKYSKSFRKMISLCLQKDPSKRPTAEELLK 263 (267)
T ss_pred HHHhcCCCC------CcCCccccccccHHHHHHHHHHcCCChhhCcCHHHHhh
Confidence 222222111 11111 11234567889999999999999999999875
No 274
>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi
Probab=100.00 E-value=9.9e-37 Score=295.41 Aligned_cols=246 Identities=23% Similarity=0.329 Sum_probs=198.9
Q ss_pred ccccccccccccceeEEEEEecCCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCCCCccccce
Q 011360 193 CFASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQIRHRNILPLLA 272 (487)
Q Consensus 193 ~~~~~~~lg~G~~g~v~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~ 272 (487)
+|.+.+.||.|+||.||++... .+++.+|+|.+... ..........+.+|+.+++++.||||+++++
T Consensus 2 ~y~~~~~ig~g~~~~vy~~~~~-~~~~~~aiK~~~~~------------~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~ 68 (290)
T cd05580 2 DFEFIKTLGTGSFGRVMLVRHK-GSGKYYALKILSKA------------KIVKLKQVEHVLNEKRILQSIRHPFLVNLYG 68 (290)
T ss_pred ceEEEEEeecCCCeEEEEEEEc-CCCCEEEEEEEEHH------------HhhhhhHHHHHHHHHHHHHhCCCCCccceee
Confidence 5889999999999999999754 57889999987321 1112234567889999999999999999999
Q ss_pred EEecCCeeEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCCEE
Q 011360 273 HMVRPDCHLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVLLNDDMEAC 352 (487)
Q Consensus 273 ~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nill~~~~~~k 352 (487)
++...+..|+||||+++++|.+++.. ...++...+..++.|++.||.|| |+.|++|+||+|+||+++.++.+|
T Consensus 69 ~~~~~~~~~~v~e~~~~~~L~~~~~~----~~~l~~~~~~~~~~qil~~l~~l---H~~~i~H~dl~p~nili~~~~~~k 141 (290)
T cd05580 69 SFQDDSNLYLVMEYVPGGELFSHLRK----SGRFPEPVARFYAAQVVLALEYL---HSLDIVYRDLKPENLLLDSDGYIK 141 (290)
T ss_pred EEEcCCeEEEEEecCCCCCHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHH---HHCCEecCCCCHHHEEECCCCCEE
Confidence 99999999999999999999999865 35789999999999999999999 678899999999999999999999
Q ss_pred EeccCCccccCCCCceeeEeeecccccccCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCccccCCCCccccHHHHHHH
Q 011360 353 ISDLGLAMAIPDGYTRVLISYVLGTMAYIAPEYFQQPELSEKCDIFSFGMLLISLVRGVPSFVFHQNGEEICSPEWLRKV 432 (487)
Q Consensus 353 l~DFg~s~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DvwslG~~l~elltg~~pf~~~~~~~~~~~~~~~~~~ 432 (487)
|+|||++...... .....+++.|+|||.+.+..++.++||||||+++|+|++|..||.... ........
T Consensus 142 l~dfg~~~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~------~~~~~~~~ 210 (290)
T cd05580 142 ITDFGFAKRVKGR-----TYTLCGTPEYLAPEIILSKGYGKAVDWWALGILIYEMLAGYPPFFDDN------PIQIYEKI 210 (290)
T ss_pred EeeCCCccccCCC-----CCCCCCCccccChhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCC------HHHHHHHH
Confidence 9999998876543 134468999999999988888999999999999999999999994332 11112222
Q ss_pred HhcCCCCCccCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCC-----ChHHHH
Q 011360 433 MNSKNPSRAIDPRLPGNGYEKKMLHVLKIAYICTLHDPEERP-----NSQYVR 480 (487)
Q Consensus 433 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RP-----s~~~il 480 (487)
. ...+ .++..+ ...+.+++.+||..+|.+|| ++++++
T Consensus 211 ~-~~~~--~~~~~~--------~~~l~~li~~~l~~~p~~R~~~~~~~~~~l~ 252 (290)
T cd05580 211 L-EGKV--RFPSFF--------SPDAKDLIRNLLQVDLTKRLGNLKNGVNDIK 252 (290)
T ss_pred h-cCCc--cCCccC--------CHHHHHHHHHHccCCHHHccCcccCCHHHHH
Confidence 2 2111 111111 35688999999999999999 677765
No 275
>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity
Probab=100.00 E-value=7e-37 Score=292.17 Aligned_cols=254 Identities=28% Similarity=0.452 Sum_probs=202.3
Q ss_pred ccccccccccccceeEEEEEecCCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCCCCccccce
Q 011360 193 CFASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQIRHRNILPLLA 272 (487)
Q Consensus 193 ~~~~~~~lg~G~~g~v~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~ 272 (487)
+|+..+.||.|++|.||++.. ..+++.+|+|.+... ........+.+|+.+++.+.||||+++++
T Consensus 2 ~~~~~~~ig~g~~~~v~~~~~-~~~~~~~~ik~~~~~--------------~~~~~~~~~~~e~~~l~~~~~~~i~~~~~ 66 (265)
T cd06605 2 DLEYLGELGAGNSGVVSKVLH-RPTGKIMAVKTIRLE--------------INEAIQKQILRELDILHKCNSPYIVGFYG 66 (265)
T ss_pred cchHHHHhcCCCCeEEEEEEE-cCCCcEEEEEEEecc--------------cChHHHHHHHHHHHHHHHCCCCchhhhhe
Confidence 578889999999999999975 457889999987431 11234567788999999999999999999
Q ss_pred EEecCCeeEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCC-CCeeecCCCCCCEEeCCCCCE
Q 011360 273 HMVRPDCHLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHS-ASIIHGDIKPRNVLLNDDMEA 351 (487)
Q Consensus 273 ~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~-~givH~Dlkp~Nill~~~~~~ 351 (487)
.+...+..+++|||+++++|.+++... ...+++..+..++.|++.||.|| |+ .|++|+||+|+||+++.++.+
T Consensus 67 ~~~~~~~~~lv~e~~~~~~L~~~~~~~---~~~~~~~~~~~~~~~l~~~l~~l---H~~~~i~H~dl~~~ni~~~~~~~~ 140 (265)
T cd06605 67 AFYNNGDISICMEYMDGGSLDKILKEV---QGRIPERILGKIAVAVLKGLTYL---HEKHKIIHRDVKPSNILVNSRGQI 140 (265)
T ss_pred eeecCCEEEEEEEecCCCcHHHHHHHc---cCCCCHHHHHHHHHHHHHHHHHH---cCCCCeecCCCCHHHEEECCCCCE
Confidence 999999999999999999999998752 26788999999999999999999 77 899999999999999999999
Q ss_pred EEeccCCccccCCCCceeeEeeecccccccCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCccccCCCCccccHHHHHH
Q 011360 352 CISDLGLAMAIPDGYTRVLISYVLGTMAYIAPEYFQQPELSEKCDIFSFGMLLISLVRGVPSFVFHQNGEEICSPEWLRK 431 (487)
Q Consensus 352 kl~DFg~s~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DvwslG~~l~elltg~~pf~~~~~~~~~~~~~~~~~ 431 (487)
+|+|||.+......... ...++..|+|||.+.+..++.++||||||+++|+|++|..||........ ...+....
T Consensus 141 ~l~d~g~~~~~~~~~~~----~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~-~~~~~~~~ 215 (265)
T cd06605 141 KLCDFGVSGQLVNSLAK----TFVGTSSYMAPERIQGNDYSVKSDIWSLGLSLIELATGRFPYPPENDPPD-GIFELLQY 215 (265)
T ss_pred EEeecccchhhHHHHhh----cccCChhccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCccccccc-cHHHHHHH
Confidence 99999998765332221 25588899999999988999999999999999999999999954322111 11222333
Q ss_pred HHhcCCCCCccCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCChHHHHH
Q 011360 432 VMNSKNPSRAIDPRLPGNGYEKKMLHVLKIAYICTLHDPEERPNSQYVRC 481 (487)
Q Consensus 432 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~~il~ 481 (487)
......+ .++.. ..+..+.+++.+||..+|++|||+.+++.
T Consensus 216 ~~~~~~~------~~~~~---~~~~~~~~li~~~l~~~p~~Rpt~~~ll~ 256 (265)
T cd06605 216 IVNEPPP------RLPSG---KFSPDFQDFVNLCLIKDPRERPSYKELLE 256 (265)
T ss_pred HhcCCCC------CCChh---hcCHHHHHHHHHHcCCCchhCcCHHHHhh
Confidence 3222211 11111 14456889999999999999999999875
No 276
>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki
Probab=100.00 E-value=1.4e-36 Score=289.06 Aligned_cols=240 Identities=23% Similarity=0.344 Sum_probs=186.4
Q ss_pred cccccccceeEEEEEecCCCC---------ceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCCCCcc
Q 011360 198 EKIGSGGCGEVYKAELPGSNG---------KMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQIRHRNIL 268 (487)
Q Consensus 198 ~~lg~G~~g~v~~~~~~~~~~---------~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv 268 (487)
+.||.|+||.||+|.+....+ ..+++|.+.. .......+.+|+.+++.++||||+
T Consensus 1 ~~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~----------------~~~~~~~~~~e~~~l~~l~h~~i~ 64 (259)
T cd05037 1 EHLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGS----------------DHRDSLAFFETASLMSQLSHKHLV 64 (259)
T ss_pred CcccccccceEEEEEEeccCCccccCCccceeeeeecccc----------------chhhHHHHHHHHHHHHcCCCcchh
Confidence 368999999999998643221 3467776521 111156778899999999999999
Q ss_pred ccceEEecCCeeEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCC
Q 011360 269 PLLAHMVRPDCHLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVLLNDD 348 (487)
Q Consensus 269 ~l~~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nill~~~ 348 (487)
++++++.. ...++||||+++|+|.+++... ...+++..+..++.|++.||.|| |++||+||||||+||+++.+
T Consensus 65 ~~~~~~~~-~~~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~~~i~~~l~~L---H~~~i~H~dlkp~Nill~~~ 137 (259)
T cd05037 65 KLYGVCVR-DENIMVEEYVKFGPLDVFLHRE---KNNVSLHWKLDVAKQLASALHYL---EDKKLVHGNVCGKNILVARY 137 (259)
T ss_pred heeeEEec-CCcEEEEEcCCCCcHHHHHHhh---ccCCCHHHHHHHHHHHHHHHHHH---hhCCeecccCccceEEEecC
Confidence 99999888 7789999999999999998752 23688999999999999999999 78899999999999999988
Q ss_pred C-------CEEEeccCCccccCCCCceeeEeeecccccccCCcccCCC--CCCchhHHHHHHHHHHHHHh-CCCCccccC
Q 011360 349 M-------EACISDLGLAMAIPDGYTRVLISYVLGTMAYIAPEYFQQP--ELSEKCDIFSFGMLLISLVR-GVPSFVFHQ 418 (487)
Q Consensus 349 ~-------~~kl~DFg~s~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~--~~~~~~DvwslG~~l~ellt-g~~pf~~~~ 418 (487)
+ .+||+|||++...... ....++..|+|||++.+. .++.++||||||+++|+|++ |..||....
T Consensus 138 ~~~~~~~~~~kl~Dfg~a~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~~~~~l~~~~~~p~~~~~ 211 (259)
T cd05037 138 GLNEGYVPFIKLSDPGIPITVLSR------EERVERIPWIAPECIRNGQASLTIAADKWSFGTTLLEICSNGEEPLSTLS 211 (259)
T ss_pred ccccCCceeEEeCCCCcccccccc------cccccCCCccChhhhcCCCCCcchhhHHHHHHHHHHHHHhCCCCCcccCC
Confidence 7 7999999998765431 233467889999999876 78999999999999999999 477774432
Q ss_pred CCCccccHHHHHHHHhcCCCCCccCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCChHHHHHHHh
Q 011360 419 NGEEICSPEWLRKVMNSKNPSRAIDPRLPGNGYEKKMLHVLKIAYICTLHDPEERPNSQYVRCRLS 484 (487)
Q Consensus 419 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~~il~~L~ 484 (487)
. .++..... .... .+... ...+.+++.+||..+|++|||+.+|++.|+
T Consensus 212 ~------~~~~~~~~-~~~~-------~~~~~----~~~~~~li~~~l~~~p~~Rpt~~~il~~l~ 259 (259)
T cd05037 212 S------SEKERFYQ-DQHR-------LPMPD----CAELANLINQCWTYDPTKRPSFRAILRDLN 259 (259)
T ss_pred c------hhHHHHHh-cCCC-------CCCCC----chHHHHHHHHHhccChhhCCCHHHHHHhcC
Confidence 1 11111111 1111 11100 156889999999999999999999998874
No 277
>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development
Probab=100.00 E-value=1.4e-36 Score=290.55 Aligned_cols=255 Identities=21% Similarity=0.338 Sum_probs=194.6
Q ss_pred ccccccccccccceeEEEEEecCCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCCCCccccce
Q 011360 193 CFASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQIRHRNILPLLA 272 (487)
Q Consensus 193 ~~~~~~~lg~G~~g~v~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~ 272 (487)
+|...+.||.|+||.||+|.. ..++..|++|++..... ..........+.+|+.+++.++||||+++++
T Consensus 3 ~~~~~~~lg~g~~g~vy~~~~-~~~~~~~~~k~~~~~~~----------~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~ 71 (266)
T cd06651 3 NWRRGKLLGQGAFGRVYLCYD-VDTGRELAAKQVQFDPE----------SPETSKEVSALECEIQLLKNLQHERIVQYYG 71 (266)
T ss_pred CccccceecCCCCEEEEEEEE-cCCCcEEEEEEeecCcC----------CchhHHHHHHHHHHHHHHHHcCCCCeeeEEE
Confidence 588899999999999999964 45788999998743110 0111234566888999999999999999999
Q ss_pred EEec--CCeeEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCC
Q 011360 273 HMVR--PDCHLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVLLNDDME 350 (487)
Q Consensus 273 ~~~~--~~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nill~~~~~ 350 (487)
++.. ....+++|||+++++|.+++.. ...+++...+.++.|++.||.|| |+.|++||||+|+||+++.++.
T Consensus 72 ~~~~~~~~~~~l~~e~~~~~~L~~~l~~----~~~l~~~~~~~~~~qi~~~l~~L---H~~~i~H~~l~p~nil~~~~~~ 144 (266)
T cd06651 72 CLRDRAEKTLTIFMEYMPGGSVKDQLKA----YGALTESVTRKYTRQILEGMSYL---HSNMIVHRDIKGANILRDSAGN 144 (266)
T ss_pred EEEcCCCCEEEEEEeCCCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHH---HhCCeeeCCCCHHHEEECCCCC
Confidence 8875 3567899999999999999864 34588899999999999999999 7788999999999999999999
Q ss_pred EEEeccCCccccCCCCc-eeeEeeecccccccCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCccccCCCCccccHHHH
Q 011360 351 ACISDLGLAMAIPDGYT-RVLISYVLGTMAYIAPEYFQQPELSEKCDIFSFGMLLISLVRGVPSFVFHQNGEEICSPEWL 429 (487)
Q Consensus 351 ~kl~DFg~s~~~~~~~~-~~~~~~~~gt~~y~aPE~l~~~~~~~~~DvwslG~~l~elltg~~pf~~~~~~~~~~~~~~~ 429 (487)
++|+|||++........ ........++..|+|||.+.+..++.++|||||||++|+|++|..||.... .....
T Consensus 145 ~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~el~~g~~pf~~~~------~~~~~ 218 (266)
T cd06651 145 VKLGDFGASKRLQTICMSGTGIRSVTGTPYWMSPEVISGEGYGRKADVWSLGCTVVEMLTEKPPWAEYE------AMAAI 218 (266)
T ss_pred EEEccCCCccccccccccCCccccCCccccccCHHHhCCCCCCchhhhHHHHHHHHHHHHCCCCccccc------hHHHH
Confidence 99999999876532111 111123457889999999998889999999999999999999999994321 11222
Q ss_pred HHHHhcCCCCCccCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCChHHHHH
Q 011360 430 RKVMNSKNPSRAIDPRLPGNGYEKKMLHVLKIAYICTLHDPEERPNSQYVRC 481 (487)
Q Consensus 430 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~~il~ 481 (487)
........ .+.++. .....+..++ +||..+|++|||+++|+.
T Consensus 219 ~~~~~~~~-----~~~~~~----~~~~~~~~li-~~~~~~p~~Rp~~~eil~ 260 (266)
T cd06651 219 FKIATQPT-----NPQLPS----HISEHARDFL-GCIFVEARHRPSAEELLR 260 (266)
T ss_pred HHHhcCCC-----CCCCch----hcCHHHHHHH-HHhcCChhhCcCHHHHhc
Confidence 22211111 112221 1224466666 688899999999999975
No 278
>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4.1e-38 Score=298.52 Aligned_cols=253 Identities=27% Similarity=0.355 Sum_probs=203.2
Q ss_pred hccccccccccccccceeEEEEEecCCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCCCCccc
Q 011360 190 KEDCFASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQIRHRNILP 269 (487)
Q Consensus 190 ~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~ 269 (487)
..+.|...++||+||||.|+-++.+ .+|+.||.|++. +..........-.++|-.++.+++.|.||.
T Consensus 183 t~n~F~~~RvlGkGGFGEV~acqvr-aTGKMYAcKkL~------------KKRiKkr~ge~maLnEk~iL~kV~s~FiVs 249 (591)
T KOG0986|consen 183 TKNTFRVYRVLGKGGFGEVCACQVR-ATGKMYACKKLD------------KKRIKKRKGETMALNEKQILEKVSSPFIVS 249 (591)
T ss_pred cccceeeeEEEecccccceeEEEEe-cchhhHHHHHHH------------HHHHHHhhhhHHhhHHHHHHHHhccCcEEE
Confidence 3456888999999999999998764 699999999762 122223334455678999999999999999
Q ss_pred cceEEecCCeeEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCC
Q 011360 270 LLAHMVRPDCHLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVLLNDDM 349 (487)
Q Consensus 270 l~~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nill~~~~ 349 (487)
+-..|.+.+.+++||..|+||+|..+|.. .++..+++..+..++.+|+.||.+| |+.+||+|||||+|||+|+.|
T Consensus 250 laYAfeTkd~LClVLtlMNGGDLkfHiyn--~g~~gF~e~ra~FYAAEi~cGLehl---H~~~iVYRDLKPeNILLDd~G 324 (591)
T KOG0986|consen 250 LAYAFETKDALCLVLTLMNGGDLKFHIYN--HGNPGFDEQRARFYAAEIICGLEHL---HRRRIVYRDLKPENILLDDHG 324 (591)
T ss_pred EeeeecCCCceEEEEEeecCCceeEEeec--cCCCCCchHHHHHHHHHHHhhHHHH---HhcceeeccCChhheeeccCC
Confidence 99999999999999999999999998876 4457899999999999999999999 888999999999999999999
Q ss_pred CEEEeccCCccccCCCCceeeEeeecccccccCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCccccCCCCccccHHHH
Q 011360 350 EACISDLGLAMAIPDGYTRVLISYVLGTMAYIAPEYFQQPELSEKCDIFSFGMLLISLVRGVPSFVFHQNGEEICSPEWL 429 (487)
Q Consensus 350 ~~kl~DFg~s~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DvwslG~~l~elltg~~pf~~~~~~~~~~~~~~~ 429 (487)
+++|+|+|+|..++.+... ...+||.+|||||++.+..|+...|+|||||++|||+.|..||...... ...+.+
T Consensus 325 hvRISDLGLAvei~~g~~~---~~rvGT~GYMAPEvl~ne~Y~~s~Dwf~lGCllYemi~G~sPFr~~KeK---vk~eEv 398 (591)
T KOG0986|consen 325 HVRISDLGLAVEIPEGKPI---RGRVGTVGYMAPEVLQNEVYDFSPDWFSLGCLLYEMIAGHSPFRQRKEK---VKREEV 398 (591)
T ss_pred CeEeeccceEEecCCCCcc---ccccCcccccCHHHHcCCcccCCccHHHHHhHHHHHHcccCchhhhhhh---hhHHHH
Confidence 9999999999998776543 3447999999999999999999999999999999999999999543221 111122
Q ss_pred HHHHhcCCCCCccCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCCh
Q 011360 430 RKVMNSKNPSRAIDPRLPGNGYEKKMLHVLKIAYICTLHDPEERPNS 476 (487)
Q Consensus 430 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~ 476 (487)
.+.+.... .......+.++.++....|.+||++|...
T Consensus 399 drr~~~~~----------~ey~~kFS~eakslc~~LL~Kdp~~RLGc 435 (591)
T KOG0986|consen 399 DRRTLEDP----------EEYSDKFSEEAKSLCEGLLTKDPEKRLGC 435 (591)
T ss_pred HHHHhcch----------hhcccccCHHHHHHHHHHHccCHHHhccC
Confidence 22221111 11222334567777778999999999643
No 279
>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio
Probab=100.00 E-value=5.1e-37 Score=296.51 Aligned_cols=264 Identities=21% Similarity=0.332 Sum_probs=197.2
Q ss_pred cccccccccccccceeEEEEEecCCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCCCCccccc
Q 011360 192 DCFASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQIRHRNILPLL 271 (487)
Q Consensus 192 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~ 271 (487)
++|++.+.||.|++|.||+|+. ..+++.||+|++... .......+.+.+|+.++++++||||++++
T Consensus 1 ~~y~~~~~l~~g~~~~v~~~~~-~~~~~~~~iK~~~~~-------------~~~~~~~~~~~~e~~~l~~~~h~~i~~~~ 66 (286)
T cd07847 1 EKYEKLSKIGEGSYGVVFKCRN-RETGQIVAIKKFVES-------------EDDPVIKKIALREIRMLKQLKHPNLVNLI 66 (286)
T ss_pred CceeeeeeecccCCeEEEEEEE-CCCCcEEEEEEEeec-------------ccCccccHHHHHHHHHHHhCCCCCEeeee
Confidence 3588999999999999999975 457899999987431 11112234567899999999999999999
Q ss_pred eEEecCCeeEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCCE
Q 011360 272 AHMVRPDCHLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVLLNDDMEA 351 (487)
Q Consensus 272 ~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nill~~~~~~ 351 (487)
+++......++||||+++++|..++.. ...+++..+..++.|++.||.|| |+.|++||||+|+||+++.++.+
T Consensus 67 ~~~~~~~~~~~v~e~~~~~~l~~~~~~----~~~~~~~~~~~~~~ql~~~l~~L---H~~~i~H~dl~p~nil~~~~~~~ 139 (286)
T cd07847 67 EVFRRKRKLHLVFEYCDHTVLNELEKN----PRGVPEHLIKKIIWQTLQAVNFC---HKHNCIHRDVKPENILITKQGQI 139 (286)
T ss_pred eEEeeCCEEEEEEeccCccHHHHHHhC----CCCCCHHHHHHHHHHHHHHHHHH---HHCCceecCCChhhEEEcCCCcE
Confidence 999999999999999999888777643 44689999999999999999999 67889999999999999999999
Q ss_pred EEeccCCccccCCCCceeeEeeecccccccCCcccCC-CCCCchhHHHHHHHHHHHHHhCCCCccccCCCCccccHHHHH
Q 011360 352 CISDLGLAMAIPDGYTRVLISYVLGTMAYIAPEYFQQ-PELSEKCDIFSFGMLLISLVRGVPSFVFHQNGEEICSPEWLR 430 (487)
Q Consensus 352 kl~DFg~s~~~~~~~~~~~~~~~~gt~~y~aPE~l~~-~~~~~~~DvwslG~~l~elltg~~pf~~~~~~~~~~~~~~~~ 430 (487)
+|+|||++......... .....++..|+|||.+.+ ..++.++||||||+++|+|++|.+||........ .....
T Consensus 140 ~l~dfg~~~~~~~~~~~--~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~i~~~l~~g~~p~~~~~~~~~---~~~~~ 214 (286)
T cd07847 140 KLCDFGFARILTGPGDD--YTDYVATRWYRAPELLVGDTQYGPPVDVWAIGCVFAELLTGQPLWPGKSDVDQ---LYLIR 214 (286)
T ss_pred EECccccceecCCCccc--ccCcccccccCCHHHHhCCCCcCchhhhHHHHHHHHHHHhCCCCCCCCChHHH---HHHHH
Confidence 99999999876543321 123457889999999876 4678999999999999999999999954332110 00001
Q ss_pred HHH-----------hcCCCCCcc-CCCCCCC-----CcHHHHHHHHHHHhhccCCCCCCCCChHHHHH
Q 011360 431 KVM-----------NSKNPSRAI-DPRLPGN-----GYEKKMLHVLKIAYICTLHDPEERPNSQYVRC 481 (487)
Q Consensus 431 ~~~-----------~~~~~~~~~-~~~~~~~-----~~~~~~~~l~~li~~cl~~~P~~RPs~~~il~ 481 (487)
... ......... .+..... .....+..+.+++.+||+.+|++|||+.+++.
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~ 282 (286)
T cd07847 215 KTLGDLIPRHQQIFSTNQFFKGLSIPEPETREPLESKFPNISSPALSFLKGCLQMDPTERLSCEELLE 282 (286)
T ss_pred HHhCCCChHHhhhcccccccccccCCCcccccCHHHHhccCCHHHHHHHHHHhcCCccccCCHHHHhc
Confidence 000 000000000 0000000 01123466889999999999999999999874
No 280
>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re
Probab=100.00 E-value=1.3e-36 Score=290.53 Aligned_cols=255 Identities=21% Similarity=0.296 Sum_probs=196.0
Q ss_pred ccccccccccccceeEEEEEecCCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCCCCccccce
Q 011360 193 CFASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQIRHRNILPLLA 272 (487)
Q Consensus 193 ~~~~~~~lg~G~~g~v~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~ 272 (487)
+|.+.+.||.|+||.||.|.. ..++..||+|.+..... ..........+.+|+.+++.+.||||+++++
T Consensus 3 ~~~~~~~l~~g~~g~v~~~~~-~~~~~~v~ik~~~~~~~----------~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~ 71 (265)
T cd06652 3 NWRLGKLLGQGAFGRVYLCYD-ADTGRELAVKQVQFDPE----------SPETSKEVNALECEIQLLKNLLHERIVQYYG 71 (265)
T ss_pred cceEeeEEecCCceEEEEEEE-cCCCcEEEEEEeecCcC----------CcccHHHHHHHHHHHHHHHhcCCCCeeeEEe
Confidence 588899999999999999974 46789999998743110 0111234567888999999999999999999
Q ss_pred EEecC--CeeEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCC
Q 011360 273 HMVRP--DCHLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVLLNDDME 350 (487)
Q Consensus 273 ~~~~~--~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nill~~~~~ 350 (487)
++.+. ..++++|||+++++|.+++.. ...+++..+..++.|++.||.|| |+.|++|+||+|+||+++.++.
T Consensus 72 ~~~~~~~~~~~~v~e~~~~~~L~~~l~~----~~~~~~~~~~~~~~~l~~~l~~l---H~~~i~H~dl~p~nil~~~~~~ 144 (265)
T cd06652 72 CLRDPMERTLSIFMEHMPGGSIKDQLKS----YGALTENVTRKYTRQILEGVSYL---HSNMIVHRDIKGANILRDSVGN 144 (265)
T ss_pred EeccCCCceEEEEEEecCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHH---HhCCEecCCCCHHHEEecCCCC
Confidence 88763 567899999999999999864 34578888999999999999999 7778999999999999999999
Q ss_pred EEEeccCCccccCCCCce-eeEeeecccccccCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCccccCCCCccccHHHH
Q 011360 351 ACISDLGLAMAIPDGYTR-VLISYVLGTMAYIAPEYFQQPELSEKCDIFSFGMLLISLVRGVPSFVFHQNGEEICSPEWL 429 (487)
Q Consensus 351 ~kl~DFg~s~~~~~~~~~-~~~~~~~gt~~y~aPE~l~~~~~~~~~DvwslG~~l~elltg~~pf~~~~~~~~~~~~~~~ 429 (487)
++|+|||++......... .......++..|+|||++.+..++.++||||||+++|+|++|..||..... ....
T Consensus 145 ~~l~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~------~~~~ 218 (265)
T cd06652 145 VKLGDFGASKRLQTICLSGTGMKSVTGTPYWMSPEVISGEGYGRKADIWSVGCTVVEMLTEKPPWAEFEA------MAAI 218 (265)
T ss_pred EEECcCccccccccccccccccccCCCCccccChhhhcCCCCCcchhHHHHHHHHHHHhhCCCCCCccch------HHHH
Confidence 999999998765322111 111234588899999999888899999999999999999999999943211 1112
Q ss_pred HHHHhcCCCCCccCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCChHHHHH
Q 011360 430 RKVMNSKNPSRAIDPRLPGNGYEKKMLHVLKIAYICTLHDPEERPNSQYVRC 481 (487)
Q Consensus 430 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~~il~ 481 (487)
....... . .+.. .......+.+++.+||. +|++|||+++|++
T Consensus 219 ~~~~~~~-~----~~~~----~~~~~~~~~~~i~~~l~-~p~~Rp~~~~il~ 260 (265)
T cd06652 219 FKIATQP-T----NPVL----PPHVSDHCRDFLKRIFV-EAKLRPSADELLR 260 (265)
T ss_pred HHHhcCC-C----CCCC----chhhCHHHHHHHHHHhc-ChhhCCCHHHHhc
Confidence 2221111 1 1111 22344568889999995 9999999999875
No 281
>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4. Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates
Probab=100.00 E-value=5.3e-37 Score=296.93 Aligned_cols=257 Identities=20% Similarity=0.333 Sum_probs=195.8
Q ss_pred ccccccccccccceeEEEEEecCCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCC-CCCccccc
Q 011360 193 CFASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQIR-HRNILPLL 271 (487)
Q Consensus 193 ~~~~~~~lg~G~~g~v~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-hpnIv~l~ 271 (487)
+|...+.||.|+||.||++.. ..++..+|+|.+.. .........+..|+.++.++. ||||++++
T Consensus 5 ~~~~~~~lg~G~~g~vy~~~~-~~~~~~~aiK~~~~--------------~~~~~~~~~~~~e~~~l~~~~~~~~iv~~~ 69 (288)
T cd06616 5 DLKDLGEIGRGAFGTVNKMLH-KPSGTIMAVKRIRS--------------TVDEKEQKRLLMDLDVVMRSSDCPYIVKFY 69 (288)
T ss_pred HhHHHHHhCCCCceEEEEEEE-CCCCCEEEEEEehh--------------ccChHHHHHHHHHHHHHHHhcCCCCEeeee
Confidence 467778999999999999975 46789999998732 111134556788999998885 99999999
Q ss_pred eEEecCCeeEEEEEecCCCCHHHHHhhhh-cCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCC
Q 011360 272 AHMVRPDCHLLVYEFMKNGSLQDILDDVS-RGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVLLNDDME 350 (487)
Q Consensus 272 ~~~~~~~~~~lv~E~~~~gsL~~~l~~~~-~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nill~~~~~ 350 (487)
+++..+...+++|||+. ++|.++..... .....+++..+..++.|++.||+||| +..|++||||||+||+++.++.
T Consensus 70 ~~~~~~~~~~~~~e~~~-~~l~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lh--~~~~i~H~dlkp~Nil~~~~~~ 146 (288)
T cd06616 70 GALFREGDCWICMELMD-ISLDKFYKYVYEVLKSVIPEEILGKIAVATVKALNYLK--EELKIIHRDVKPSNILLDRNGN 146 (288)
T ss_pred eEEecCCcEEEEEeccc-CCHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHh--hcCCeeccCCCHHHEEEccCCc
Confidence 99999999999999985 57766543221 23467899999999999999999996 3458999999999999999999
Q ss_pred EEEeccCCccccCCCCceeeEeeecccccccCCcccCCC---CCCchhHHHHHHHHHHHHHhCCCCccccCCCCccccHH
Q 011360 351 ACISDLGLAMAIPDGYTRVLISYVLGTMAYIAPEYFQQP---ELSEKCDIFSFGMLLISLVRGVPSFVFHQNGEEICSPE 427 (487)
Q Consensus 351 ~kl~DFg~s~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~---~~~~~~DvwslG~~l~elltg~~pf~~~~~~~~~~~~~ 427 (487)
++|+|||++......... ....|++.|+|||++.+. .++.++||||||+++|+|++|..||.... ...+
T Consensus 147 ~kl~dfg~~~~~~~~~~~---~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~-----~~~~ 218 (288)
T cd06616 147 IKLCDFGISGQLVDSIAK---TRDAGCRPYMAPERIDPSARDGYDVRSDVWSLGITLYEVATGKFPYPKWN-----SVFD 218 (288)
T ss_pred EEEeecchhHHhccCCcc---ccccCccCccCHHHhccccccCCcchhhhhHHHHHHHHHHhCCCCchhcc-----hHHH
Confidence 999999998765433221 233578999999998876 68999999999999999999999994332 1111
Q ss_pred HHHHHHhcCCCCCccCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCChHHHHH
Q 011360 428 WLRKVMNSKNPSRAIDPRLPGNGYEKKMLHVLKIAYICTLHDPEERPNSQYVRC 481 (487)
Q Consensus 428 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~~il~ 481 (487)
..........+ .++.......+..+.+++.+||+.+|++|||+.+|+.
T Consensus 219 ~~~~~~~~~~~------~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~i~~ 266 (288)
T cd06616 219 QLTQVVKGDPP------ILSNSEEREFSPSFVNFINLCLIKDESKRPKYKELLE 266 (288)
T ss_pred HHhhhcCCCCC------cCCCcCCCccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 22222211111 1222222234567899999999999999999999876
No 282
>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase. Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina
Probab=100.00 E-value=1.7e-36 Score=290.25 Aligned_cols=251 Identities=25% Similarity=0.339 Sum_probs=192.1
Q ss_pred ccccccccccccceeEEEEEecCCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCCCCccccce
Q 011360 193 CFASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQIRHRNILPLLA 272 (487)
Q Consensus 193 ~~~~~~~lg~G~~g~v~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~ 272 (487)
.+.....||+|+||.||+|.. ..++..|++|.+.. ........+.+|+.+++.++||||+++++
T Consensus 9 ~~~~~~~lg~g~~g~v~~~~~-~~~~~~v~~k~~~~---------------~~~~~~~~~~~e~~~l~~l~h~~iv~~~~ 72 (268)
T cd06624 9 ENGERVVLGKGTYGIVYAARD-LSTQVRIAIKEIPE---------------RDSRYVQPLHEEIALHSYLKHRNIVQYLG 72 (268)
T ss_pred cCCceEEEecCCceEEEEeEe-cCCCcEEEEEEecC---------------CCHHHHHHHHHHHHHHHhcCCCCeeeeee
Confidence 344456899999999999975 35788999998732 11223457788999999999999999999
Q ss_pred EEecCCeeEEEEEecCCCCHHHHHhhhhcCCCCC--ChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCC-CC
Q 011360 273 HMVRPDCHLLVYEFMKNGSLQDILDDVSRGRREL--DWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVLLND-DM 349 (487)
Q Consensus 273 ~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~~l--~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nill~~-~~ 349 (487)
++..++..+++|||+++++|.+++... ...+ +...+..++.|++.||.|| |+.||+||||||+||+++. ++
T Consensus 73 ~~~~~~~~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~~~~qi~~al~~l---H~~~i~h~dl~p~nil~~~~~~ 146 (268)
T cd06624 73 SDSENGFFKIFMEQVPGGSLSALLRSK---WGPLKDNEQTIIFYTKQILEGLKYL---HDNQIVHRDIKGDNVLVNTYSG 146 (268)
T ss_pred eeccCCEEEEEEecCCCCCHHHHHHHh---cccCCCcHHHHHHHHHHHHHHHHHH---HHCCEeecCCCHHHEEEcCCCC
Confidence 999999999999999999999998742 2334 7788889999999999999 7789999999999999976 67
Q ss_pred CEEEeccCCccccCCCCceeeEeeecccccccCCcccCCC--CCCchhHHHHHHHHHHHHHhCCCCccccCCCCccccHH
Q 011360 350 EACISDLGLAMAIPDGYTRVLISYVLGTMAYIAPEYFQQP--ELSEKCDIFSFGMLLISLVRGVPSFVFHQNGEEICSPE 427 (487)
Q Consensus 350 ~~kl~DFg~s~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~--~~~~~~DvwslG~~l~elltg~~pf~~~~~~~~~~~~~ 427 (487)
.++|+|||++......... .....+++.|+|||.+... .++.++|+||||+++|+|++|..||........ .
T Consensus 147 ~~~l~dfg~~~~~~~~~~~--~~~~~~~~~~~aPE~~~~~~~~~~~~~Dv~slGvvl~~l~~g~~p~~~~~~~~~----~ 220 (268)
T cd06624 147 VVKISDFGTSKRLAGINPC--TETFTGTLQYMAPEVIDKGPRGYGAPADIWSLGCTIVEMATGKPPFIELGEPQA----A 220 (268)
T ss_pred eEEEecchhheecccCCCc--cccCCCCccccChhhhccccccCCchhhhHHHHHHHHHHHhCCCCCccccChhh----h
Confidence 8999999998765432211 1234578999999998654 378999999999999999999999954321110 0
Q ss_pred HHHHHHhcCCCCCccCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCChHHHHH
Q 011360 428 WLRKVMNSKNPSRAIDPRLPGNGYEKKMLHVLKIAYICTLHDPEERPNSQYVRC 481 (487)
Q Consensus 428 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~~il~ 481 (487)
......... .+.++. .....+.+++.+||+.+|++|||+.+++.
T Consensus 221 ~~~~~~~~~------~~~~~~----~~~~~~~~li~~~l~~~p~~Rpt~~~ll~ 264 (268)
T cd06624 221 MFKVGMFKI------HPEIPE----SLSAEAKNFILRCFEPDPDKRASAHDLLQ 264 (268)
T ss_pred Hhhhhhhcc------CCCCCc----ccCHHHHHHHHHHcCCCchhCCCHHHHHh
Confidence 111000010 111221 22356889999999999999999999875
No 283
>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops
Probab=100.00 E-value=9.4e-37 Score=289.90 Aligned_cols=252 Identities=24% Similarity=0.351 Sum_probs=198.9
Q ss_pred cccccccccccceeEEEEEecCCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCCCCccccceE
Q 011360 194 FASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQIRHRNILPLLAH 273 (487)
Q Consensus 194 ~~~~~~lg~G~~g~v~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~ 273 (487)
|...+.||.|++|.||+|.. ..++..|++|.+...... .......+.+.+|+.+++.++||||++++++
T Consensus 2 ~~~~~~ig~g~~~~vy~~~~-~~~~~~~~ik~~~~~~~~----------~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~ 70 (258)
T cd06632 2 WRKGELLGSGSFGSVYEGLN-LDDGDFFAVKEVSLADDG----------QTGQEAVKQLEQEIALLSKLQHPNIVQYLGT 70 (258)
T ss_pred ccccceeeecCCceEEEEEE-cCCCcEEEEEEEEEcccc----------ccchHHHHHHHHHHHHHHhcCCCCchheeee
Confidence 66778999999999999975 357889999987442110 1122345678889999999999999999999
Q ss_pred EecCCeeEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCCEEE
Q 011360 274 MVRPDCHLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVLLNDDMEACI 353 (487)
Q Consensus 274 ~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nill~~~~~~kl 353 (487)
+......+++|||+++++|.+++.. ...+++..+..++.|++.||.|| |+.|++|+||+|+||+++.++.+||
T Consensus 71 ~~~~~~~~lv~e~~~~~~L~~~~~~----~~~~~~~~~~~~~~~i~~~l~~l---H~~~i~H~dl~~~ni~~~~~~~~kl 143 (258)
T cd06632 71 EREEDNLYIFLELVPGGSLAKLLKK----YGSFPEPVIRLYTRQILLGLEYL---HDRNTVHRDIKGANILVDTNGVVKL 143 (258)
T ss_pred EecCCeEEEEEEecCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHH---HHCCcccCCCCHHHEEECCCCCEEE
Confidence 9999999999999999999999864 34688999999999999999999 6778999999999999999999999
Q ss_pred eccCCccccCCCCceeeEeeecccccccCCcccCCCC-CCchhHHHHHHHHHHHHHhCCCCccccCCCCccccHHHHHHH
Q 011360 354 SDLGLAMAIPDGYTRVLISYVLGTMAYIAPEYFQQPE-LSEKCDIFSFGMLLISLVRGVPSFVFHQNGEEICSPEWLRKV 432 (487)
Q Consensus 354 ~DFg~s~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~-~~~~~DvwslG~~l~elltg~~pf~~~~~~~~~~~~~~~~~~ 432 (487)
+|||++....... ......+++.|+|||.+.... ++.++|+||||+++|+|++|..||.... ........
T Consensus 144 ~d~~~~~~~~~~~---~~~~~~~~~~y~~pe~~~~~~~~~~~~D~~slG~~l~~l~~g~~pf~~~~------~~~~~~~~ 214 (258)
T cd06632 144 ADFGMAKQVVEFS---FAKSFKGSPYWMAPEVIAQQGGYGLAADIWSLGCTVLEMATGKPPWSQLE------GVAAVFKI 214 (258)
T ss_pred ccCccceeccccc---cccccCCCcceeCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcccCc------HHHHHHHH
Confidence 9999987654432 113456889999999988766 8999999999999999999999994332 11222222
Q ss_pred HhcCCCCCccCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCChHHHHH
Q 011360 433 MNSKNPSRAIDPRLPGNGYEKKMLHVLKIAYICTLHDPEERPNSQYVRC 481 (487)
Q Consensus 433 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~~il~ 481 (487)
.... ....+++. ....+.+++.+||+.+|++|||+.+++.
T Consensus 215 ~~~~-~~~~~~~~--------~~~~~~~li~~~l~~~p~~Rp~~~~~l~ 254 (258)
T cd06632 215 GRSK-ELPPIPDH--------LSDEAKDFILKCLQRDPSLRPTAAELLE 254 (258)
T ss_pred Hhcc-cCCCcCCC--------cCHHHHHHHHHHhhcCcccCcCHHHHhc
Confidence 1111 11111111 2356889999999999999999999875
No 284
>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi
Probab=100.00 E-value=7e-37 Score=296.92 Aligned_cols=250 Identities=28% Similarity=0.422 Sum_probs=198.4
Q ss_pred cccccccccccccceeEEEEEecCCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCCCCccccc
Q 011360 192 DCFASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQIRHRNILPLL 271 (487)
Q Consensus 192 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~ 271 (487)
++|.+.+.||.|+||.||++. +..++..||+|.+.. ........+.+|+.+++.++||||++++
T Consensus 19 ~~~~~~~~lg~g~~g~v~~~~-~~~~~~~v~iK~~~~---------------~~~~~~~~~~~e~~~l~~l~hp~i~~~~ 82 (293)
T cd06647 19 KKYTRFEKIGQGASGTVYTAI-DVATGQEVAIKQMNL---------------QQQPKKELIINEILVMRENKHPNIVNYL 82 (293)
T ss_pred hhceeeeEecCCCCeEEEEEE-EcCCCCEEEEEEecc---------------ccchHHHHHHHHHHHHhhcCCCCeeehh
Confidence 468999999999999999996 445788999998732 1122345678899999999999999999
Q ss_pred eEEecCCeeEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCCE
Q 011360 272 AHMVRPDCHLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVLLNDDMEA 351 (487)
Q Consensus 272 ~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nill~~~~~~ 351 (487)
+.+...+..|+|+||+++++|.+++.. ..+++..+..++.|++.||.|| |++|++|+||+|+||+++.++.+
T Consensus 83 ~~~~~~~~~~lv~e~~~~~~L~~~~~~-----~~l~~~~~~~i~~~l~~al~~L---H~~gi~H~dL~p~Nili~~~~~~ 154 (293)
T cd06647 83 DSYLVGDELWVVMEYLAGGSLTDVVTE-----TCMDEGQIAAVCRECLQALEFL---HSNQVIHRDIKSDNILLGMDGSV 154 (293)
T ss_pred heeeeCCcEEEEEecCCCCcHHHHHhh-----cCCCHHHHHHHHHHHHHHHHHH---HhCCEeeccCCHHHEEEcCCCCE
Confidence 999999999999999999999999863 3578889999999999999999 78899999999999999999999
Q ss_pred EEeccCCccccCCCCceeeEeeecccccccCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCccccCCCCccccHHHHHH
Q 011360 352 CISDLGLAMAIPDGYTRVLISYVLGTMAYIAPEYFQQPELSEKCDIFSFGMLLISLVRGVPSFVFHQNGEEICSPEWLRK 431 (487)
Q Consensus 352 kl~DFg~s~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DvwslG~~l~elltg~~pf~~~~~~~~~~~~~~~~~ 431 (487)
+|+|||++......... .....+++.|+|||.+.+..++.++|+||||+++|++++|..||......... ..
T Consensus 155 kL~dfg~~~~~~~~~~~--~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~ll~~ll~g~~pf~~~~~~~~~------~~ 226 (293)
T cd06647 155 KLTDFGFCAQITPEQSK--RSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRAL------YL 226 (293)
T ss_pred EEccCcceecccccccc--cccccCChhhcCchhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChhhhe------ee
Confidence 99999988765433221 12345888999999998888999999999999999999999999543321111 11
Q ss_pred HHhcCCCCCccCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCChHHHHH
Q 011360 432 VMNSKNPSRAIDPRLPGNGYEKKMLHVLKIAYICTLHDPEERPNSQYVRC 481 (487)
Q Consensus 432 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~~il~ 481 (487)
......+. .+ ........+.+++.+||..+|++||++.+++.
T Consensus 227 ~~~~~~~~------~~--~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~ 268 (293)
T cd06647 227 IATNGTPE------LQ--NPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQ 268 (293)
T ss_pred hhcCCCCC------CC--CccccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 11111111 10 11123346889999999999999999999875
No 285
>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1. Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.
Probab=100.00 E-value=5.7e-37 Score=291.78 Aligned_cols=251 Identities=22% Similarity=0.313 Sum_probs=202.3
Q ss_pred ccccccccccccceeEEEEEecCCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCCCCccccce
Q 011360 193 CFASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQIRHRNILPLLA 272 (487)
Q Consensus 193 ~~~~~~~lg~G~~g~v~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~ 272 (487)
+|.+.+.||.|+||.||++.. ..++..||+|.+... ........+.+.+|+.++++++||||+++++
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~-~~~~~~~~ik~~~~~------------~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~ 67 (258)
T cd05578 1 HFELLRVIGKGAFGKVCIVQK-RDTKKMFAMKYMNKQ------------KCVEKGSVRNVLNERRILQELNHPFLVNLWY 67 (258)
T ss_pred CceEEEEeccCCCceEEEEEE-ccCCcEEEEEEEehh------------hhcchhHHHHHHHHHHHHHhCCCCChHHHHH
Confidence 378889999999999999975 457889999988421 1112235677889999999999999999999
Q ss_pred EEecCCeeEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCCEE
Q 011360 273 HMVRPDCHLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVLLNDDMEAC 352 (487)
Q Consensus 273 ~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nill~~~~~~k 352 (487)
.+..+...++||||+.|++|.+++.. ...+++..+..++.|+++||.|| |++|++|+||+|+||+++.++.++
T Consensus 68 ~~~~~~~~~lv~e~~~~~~L~~~l~~----~~~l~~~~~~~~~~~i~~~l~~l---h~~~i~h~dl~~~nil~~~~~~~~ 140 (258)
T cd05578 68 SFQDEENMYLVVDLLLGGDLRYHLSQ----KVKFSEEQVKFWICEIVLALEYL---HSKGIIHRDIKPDNILLDEQGHVH 140 (258)
T ss_pred hhcCCCeEEEEEeCCCCCCHHHHHHh----cCCcCHHHHHHHHHHHHHHHHHH---HhCCeeccCCCHHHeEEcCCCCEE
Confidence 99999999999999999999999875 35788999999999999999999 677899999999999999999999
Q ss_pred EeccCCccccCCCCceeeEeeecccccccCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCccccCCCCccccHHHHHHH
Q 011360 353 ISDLGLAMAIPDGYTRVLISYVLGTMAYIAPEYFQQPELSEKCDIFSFGMLLISLVRGVPSFVFHQNGEEICSPEWLRKV 432 (487)
Q Consensus 353 l~DFg~s~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DvwslG~~l~elltg~~pf~~~~~~~~~~~~~~~~~~ 432 (487)
|+|||++........ .....|+..|+|||.+.+..++.++|+||||+++|+|++|..||...... ........
T Consensus 141 l~d~~~~~~~~~~~~---~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~----~~~~~~~~ 213 (258)
T cd05578 141 ITDFNIATKVTPDTL---TTSTSGTPGYMAPEVLCRQGYSVAVDWWSLGVTAYECLRGKRPYRGHSRT----IRDQIRAK 213 (258)
T ss_pred EeecccccccCCCcc---ccccCCChhhcCHHHHcccCCCCcccchhhHHHHHHHHhCCCCCCCCCcc----HHHHHHHH
Confidence 999999877654321 13355888999999999888999999999999999999999999544321 12233222
Q ss_pred HhcCCCCCccCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCCh--HHHH
Q 011360 433 MNSKNPSRAIDPRLPGNGYEKKMLHVLKIAYICTLHDPEERPNS--QYVR 480 (487)
Q Consensus 433 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~--~~il 480 (487)
... .....++.+ +..+.+++.+||..+|.+||++ ++++
T Consensus 214 ~~~--~~~~~~~~~--------~~~~~~~i~~~l~~~p~~R~~~~~~~l~ 253 (258)
T cd05578 214 QET--ADVLYPATW--------STEAIDAINKLLERDPQKRLGDNLKDLK 253 (258)
T ss_pred hcc--ccccCcccC--------cHHHHHHHHHHccCChhHcCCccHHHHh
Confidence 221 111222222 3668899999999999999999 6665
No 286
>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also
Probab=100.00 E-value=2.5e-37 Score=298.47 Aligned_cols=261 Identities=23% Similarity=0.309 Sum_probs=193.3
Q ss_pred ccccccccccccceeEEEEEecCCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCCCCccccce
Q 011360 193 CFASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQIRHRNILPLLA 272 (487)
Q Consensus 193 ~~~~~~~lg~G~~g~v~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~ 272 (487)
+|.+.+.||.|+||.||+|.. ..+|..||+|.+.... ........+.+|+.+++.++||||+++++
T Consensus 1 ~y~~~~~l~~g~~~~vy~~~~-~~~g~~~~~k~~~~~~-------------~~~~~~~~~~~ei~~l~~l~h~~i~~~~~ 66 (284)
T cd07839 1 KYEKLEKIGEGTYGTVFKAKN-RETHEIVALKRVRLDD-------------DDEGVPSSALREICLLKELKHKNIVRLYD 66 (284)
T ss_pred CceeEEEecccCCeEEEEEEE-CCCCcEEEEEEeeccc-------------ccccCccchhHHHHHHHhcCCCCeeeHHH
Confidence 377889999999999999975 4578899999884311 11112345667999999999999999999
Q ss_pred EEecCCeeEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCCEE
Q 011360 273 HMVRPDCHLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVLLNDDMEAC 352 (487)
Q Consensus 273 ~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nill~~~~~~k 352 (487)
++.+....++++||+. ++|.+++.. ....+++..++.++.|++.||.|| |++|++||||||+||+++.++.++
T Consensus 67 ~~~~~~~~~lv~e~~~-~~l~~~~~~---~~~~~~~~~~~~~~~qi~~al~~L---H~~~i~H~dl~~~nil~~~~~~~~ 139 (284)
T cd07839 67 VLHSDKKLTLVFEYCD-QDLKKYFDS---CNGDIDPEIVKSFMFQLLKGLAFC---HSHNVLHRDLKPQNLLINKNGELK 139 (284)
T ss_pred HhccCCceEEEEecCC-CCHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHH---HHCCEecCCCCHHHEEEcCCCcEE
Confidence 9999999999999996 578887753 245689999999999999999999 677899999999999999999999
Q ss_pred EeccCCccccCCCCceeeEeeecccccccCCcccCCC-CCCchhHHHHHHHHHHHHHhCCCCccccCCCCccccHHHHHH
Q 011360 353 ISDLGLAMAIPDGYTRVLISYVLGTMAYIAPEYFQQP-ELSEKCDIFSFGMLLISLVRGVPSFVFHQNGEEICSPEWLRK 431 (487)
Q Consensus 353 l~DFg~s~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~-~~~~~~DvwslG~~l~elltg~~pf~~~~~~~~~~~~~~~~~ 431 (487)
|+|||++......... .....+++.|+|||++.+. .++.++||||||+++|+|+||..||...... .+....
T Consensus 140 l~dfg~~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~tg~~p~~~~~~~-----~~~~~~ 212 (284)
T cd07839 140 LADFGLARAFGIPVRC--YSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDV-----DDQLKR 212 (284)
T ss_pred ECccchhhccCCCCCC--cCCCccccCCcChHHHhCCcccCcHHHHHHHHHHHHHHHhcCCCCcCCCCH-----HHHHHH
Confidence 9999998765433211 1234578899999988764 5789999999999999999998776332211 111111
Q ss_pred HHhc-------------CCCCCccCCCCCCC-----CcHHHHHHHHHHHhhccCCCCCCCCChHHHHH
Q 011360 432 VMNS-------------KNPSRAIDPRLPGN-----GYEKKMLHVLKIAYICTLHDPEERPNSQYVRC 481 (487)
Q Consensus 432 ~~~~-------------~~~~~~~~~~~~~~-----~~~~~~~~l~~li~~cl~~~P~~RPs~~~il~ 481 (487)
.... ..+....-+..+.. .....+.++.+++.+||+.||.+|||+++++.
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~il~ 280 (284)
T cd07839 213 IFRLLGTPTEESWPGVSKLPDYKPYPMYPATTSLVNVVPKLNSTGRDLLQNLLVCNPVQRISAEEALQ 280 (284)
T ss_pred HHHHhCCCChHHhHHhhhcccccccCCCCCcchhhhhcccCCHHHHHHHHHHhcCChhhcCCHHHHhc
Confidence 1100 00000000001100 11123457889999999999999999999875
No 287
>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI
Probab=100.00 E-value=4.7e-37 Score=296.86 Aligned_cols=260 Identities=26% Similarity=0.393 Sum_probs=196.0
Q ss_pred ccccccccccccceeEEEEEecCCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCCCCccccce
Q 011360 193 CFASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQIRHRNILPLLA 272 (487)
Q Consensus 193 ~~~~~~~lg~G~~g~v~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~ 272 (487)
.|.+.+.||.|+||.||+|.+. .+++.||+|.+.. ..........+.+|+.+++.++||||+++++
T Consensus 2 ~y~~~~~lg~g~~~~vy~~~~~-~~~~~~~iK~~~~-------------~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~ 67 (286)
T cd07846 2 KYENLGLVGEGSYGMVMKCKHK-ETGQIVAIKKFLE-------------SEDDKMVKKIAMREIRMLKQLRHENLVNLIE 67 (286)
T ss_pred ceeEeeeeccCCCeEEEEEEEC-CCCCEEEEEeHhh-------------ccCcchhhHHHHHHHHHHHhcCCcchhhHHH
Confidence 5889999999999999999754 5688999998632 1111223456778999999999999999999
Q ss_pred EEecCCeeEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCCEE
Q 011360 273 HMVRPDCHLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVLLNDDMEAC 352 (487)
Q Consensus 273 ~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nill~~~~~~k 352 (487)
++..++..|+||||+++++|..+... ...+++..+..++.|++.||.|| |+.|++|+||+|+||++++++.++
T Consensus 68 ~~~~~~~~~lv~e~~~~~~l~~~~~~----~~~~~~~~~~~~~~~i~~~l~~L---H~~~i~h~~l~p~ni~~~~~~~~~ 140 (286)
T cd07846 68 VFRRKKRLYLVFEFVDHTVLDDLEKY----PNGLDESRVRKYLFQILRGIEFC---HSHNIIHRDIKPENILVSQSGVVK 140 (286)
T ss_pred hcccCCeEEEEEecCCccHHHHHHhc----cCCCCHHHHHHHHHHHHHHHHHH---HHCCccccCCCHHHEEECCCCcEE
Confidence 99999999999999999888876643 34589999999999999999999 677899999999999999999999
Q ss_pred EeccCCccccCCCCceeeEeeecccccccCCcccCC-CCCCchhHHHHHHHHHHHHHhCCCCccccCCCCccccHHHHHH
Q 011360 353 ISDLGLAMAIPDGYTRVLISYVLGTMAYIAPEYFQQ-PELSEKCDIFSFGMLLISLVRGVPSFVFHQNGEEICSPEWLRK 431 (487)
Q Consensus 353 l~DFg~s~~~~~~~~~~~~~~~~gt~~y~aPE~l~~-~~~~~~~DvwslG~~l~elltg~~pf~~~~~~~~~~~~~~~~~ 431 (487)
|+|||++......... .....++..|+|||.+.+ ..++.++||||||+++|+|++|.+||...... +....
T Consensus 141 l~dfg~~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~------~~~~~ 212 (286)
T cd07846 141 LCDFGFARTLAAPGEV--YTDYVATRWYRAPELLVGDTKYGRAVDIWAVGCLVTEMLTGEPLFPGDSDI------DQLYH 212 (286)
T ss_pred EEeeeeeeeccCCccc--cCcccceeeccCcHHhccccccCchHhHHHHHHHHHHHHcCCCCCCCCchH------HHHHH
Confidence 9999998765443221 123457889999998875 45788999999999999999999998533210 11111
Q ss_pred HHh--------------cCCC-CCccCCCCCC-----CCcHHHHHHHHHHHhhccCCCCCCCCChHHHHH
Q 011360 432 VMN--------------SKNP-SRAIDPRLPG-----NGYEKKMLHVLKIAYICTLHDPEERPNSQYVRC 481 (487)
Q Consensus 432 ~~~--------------~~~~-~~~~~~~~~~-----~~~~~~~~~l~~li~~cl~~~P~~RPs~~~il~ 481 (487)
... .... .....+.... ......+..+.+++.+||+.+|++|||+.+|++
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~ 282 (286)
T cd07846 213 IIKCLGNLIPRHQEIFQKNPLFAGMRLPEVKEIEPLEKRFPKLSGLVLDLAKQCLRIDPDDRPSSSQLLH 282 (286)
T ss_pred HHHHhCCCchhhHHHhccchHhhccccccccCcchHHHhCCCcCHHHHHHHHHHhcCCcccchhHHHHhc
Confidence 100 0000 0000000000 001123467899999999999999999999875
No 288
>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin
Probab=100.00 E-value=1.9e-36 Score=297.08 Aligned_cols=256 Identities=22% Similarity=0.345 Sum_probs=200.9
Q ss_pred ccccccccccccceeEEEEEecCCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCCCCccccce
Q 011360 193 CFASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQIRHRNILPLLA 272 (487)
Q Consensus 193 ~~~~~~~lg~G~~g~v~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~ 272 (487)
+|...+.||.|++|.||+|... .+++.||+|.+.... .........+..|+.++..+.||||+++++
T Consensus 2 ~y~~~~~ig~g~~g~vy~~~~~-~~~~~~aiK~~~~~~------------~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~ 68 (316)
T cd05574 2 HFKKIKLLGKGDVGRVFLVRLK-GTGKLFALKVLDKKE------------MIKRNKVKRVLTEQEILATLDHPFLPTLYA 68 (316)
T ss_pred ceEEeeeecCCccEEEEEEEEc-CCCcEEEEEEEeccc------------cchHHHHHHHHHHHHHHHhCCCCCchhhee
Confidence 5888999999999999999754 478999999884311 111234567888999999999999999999
Q ss_pred EEecCCeeEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCCEE
Q 011360 273 HMVRPDCHLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVLLNDDMEAC 352 (487)
Q Consensus 273 ~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nill~~~~~~k 352 (487)
.+......|+||||+.+++|.+++.. ..+..+++..+..++.|++.||+|| |+.|++|+||||+||+++.++.++
T Consensus 69 ~~~~~~~~~lv~e~~~~~~L~~~~~~--~~~~~l~~~~~~~~~~qi~~~l~~l---H~~~i~H~dlkp~Nili~~~~~~~ 143 (316)
T cd05574 69 SFQTETYLCLVMDYCPGGELFRLLQR--QPGKCLSEEVARFYAAEVLLALEYL---HLLGIVYRDLKPENILLHESGHIM 143 (316)
T ss_pred eeecCCEEEEEEEecCCCCHHHHHHh--CCCCccCHHHHHHHHHHHHHHHHHH---HHCCeeccCCChHHeEEcCCCCEE
Confidence 99999999999999999999999874 3346789999999999999999999 778899999999999999999999
Q ss_pred EeccCCccccCCCCce---------------------------eeEeeecccccccCCcccCCCCCCchhHHHHHHHHHH
Q 011360 353 ISDLGLAMAIPDGYTR---------------------------VLISYVLGTMAYIAPEYFQQPELSEKCDIFSFGMLLI 405 (487)
Q Consensus 353 l~DFg~s~~~~~~~~~---------------------------~~~~~~~gt~~y~aPE~l~~~~~~~~~DvwslG~~l~ 405 (487)
|+|||++......... .......|+..|+|||++.+..++.++||||||+++|
T Consensus 144 l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Di~slG~ll~ 223 (316)
T cd05574 144 LSDFDLSKQSDVEPPPVSKALRKGSRRSSVNSIPSETFSEEPSFRSNSFVGTEEYIAPEVISGDGHGSAVDWWTLGILLY 223 (316)
T ss_pred EeecchhhcccccccccccccccccccccccccchhhhcccccCCCCCCcCccCCcCHHHHcCCCCCchHHHHHHHHHHH
Confidence 9999998754322110 0011235788999999999888999999999999999
Q ss_pred HHHhCCCCccccCCCCccccHHHHHHHHhcCCCCCccCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCC----hHHHHH
Q 011360 406 SLVRGVPSFVFHQNGEEICSPEWLRKVMNSKNPSRAIDPRLPGNGYEKKMLHVLKIAYICTLHDPEERPN----SQYVRC 481 (487)
Q Consensus 406 elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs----~~~il~ 481 (487)
+|++|..||...... ......... .+. ++.. ...+..+.+++.+||+.+|++||| +++++.
T Consensus 224 ~l~~g~~pf~~~~~~------~~~~~~~~~-~~~------~~~~--~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~ll~ 288 (316)
T cd05574 224 EMLYGTTPFKGSNRD------ETFSNILKK-EVT------FPGS--PPVSSSARDLIRKLLVKDPSKRLGSKRGAAEIKQ 288 (316)
T ss_pred HHhhCCCCCCCCchH------HHHHHHhcC-Ccc------CCCc--cccCHHHHHHHHHHccCCHhHCCCchhhHHHHHc
Confidence 999999999543321 112222211 111 1111 113467999999999999999999 777665
No 289
>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]
Probab=100.00 E-value=1.5e-37 Score=280.58 Aligned_cols=252 Identities=22% Similarity=0.348 Sum_probs=201.5
Q ss_pred cccccc-cccccccceeEEEEEecCCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccC-CCCCccc
Q 011360 192 DCFASL-EKIGSGGCGEVYKAELPGSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQI-RHRNILP 269 (487)
Q Consensus 192 ~~~~~~-~~lg~G~~g~v~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpnIv~ 269 (487)
++|.+. ++||-|-.|+|-.+. ++.+++.+|+|++. .....++|+++--.. .|||||.
T Consensus 61 edY~is~qvLG~GinGkV~~C~-~k~T~ekfALKvL~--------------------Ds~KARrEVeLHw~~s~h~~iV~ 119 (400)
T KOG0604|consen 61 EDYSISWQVLGAGINGKVVQCV-HKRTQEKFALKVLL--------------------DSPKARREVELHWMASGHPHIVS 119 (400)
T ss_pred hhheehhhhhccccCCceEEEE-eccchhhhHHHHHh--------------------cCHHHHhHhhhhhhhcCCCceEE
Confidence 345544 679999999999885 56799999999762 122345666654333 8999999
Q ss_pred cceEEec----CCeeEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEe
Q 011360 270 LLAHMVR----PDCHLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVLL 345 (487)
Q Consensus 270 l~~~~~~----~~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nill 345 (487)
+++++.+ ..++.+|||+++||.|.+.++. ++...+++..+..|+.||..|+.|| |+.+|.||||||+|+|.
T Consensus 120 IidVyeNs~~~rkcLLiVmE~meGGeLfsriq~--~g~~afTErea~eI~~qI~~Av~~l---H~~nIAHRDlKpENLLy 194 (400)
T KOG0604|consen 120 IIDVYENSYQGRKCLLIVMECMEGGELFSRIQD--RGDQAFTEREASEIMKQIGLAVRYL---HSMNIAHRDLKPENLLY 194 (400)
T ss_pred eehhhhhhccCceeeEeeeecccchHHHHHHHH--cccccchHHHHHHHHHHHHHHHHHH---HhcchhhccCChhheee
Confidence 9998764 4678899999999999999987 5677899999999999999999999 78889999999999999
Q ss_pred CC---CCCEEEeccCCccccCCCCceeeEeeecccccccCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCccccCCCCc
Q 011360 346 ND---DMEACISDLGLAMAIPDGYTRVLISYVLGTMAYIAPEYFQQPELSEKCDIFSFGMLLISLVRGVPSFVFHQNGEE 422 (487)
Q Consensus 346 ~~---~~~~kl~DFg~s~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DvwslG~~l~elltg~~pf~~~~~~~~ 422 (487)
+. |..+||+|||+++....... ..+.+.||.|.|||++....|+..+|+||+|+++|-|++|.+||-... .-
T Consensus 195 t~t~~na~lKLtDfGFAK~t~~~~~---L~TPc~TPyYvaPevlg~eKydkscdmwSlgVimYIlLCGyPPFYS~h--g~ 269 (400)
T KOG0604|consen 195 TTTSPNAPLKLTDFGFAKETQEPGD---LMTPCFTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNH--GL 269 (400)
T ss_pred ecCCCCcceEecccccccccCCCcc---ccCCcccccccCHHHhCchhcCCCCCccchhHHHHHhhcCCCcccccC--Cc
Confidence 74 55699999999987654322 245678999999999999999999999999999999999999993322 22
Q ss_pred cccHHHHHHHHhcCCCCCccCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCChHHHHH
Q 011360 423 ICSPEWLRKVMNSKNPSRAIDPRLPGNGYEKKMLHVLKIAYICTLHDPEERPNSQYVRC 481 (487)
Q Consensus 423 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~~il~ 481 (487)
...+....++..+. ..+|.......++...++|+.+|..+|.+|.|++++++
T Consensus 270 aispgMk~rI~~gq-------y~FP~pEWs~VSe~aKdlIR~LLkt~PteRlTI~~~m~ 321 (400)
T KOG0604|consen 270 AISPGMKRRIRTGQ-------YEFPEPEWSCVSEAAKDLIRKLLKTEPTERLTIEEVMD 321 (400)
T ss_pred cCChhHHhHhhccC-------ccCCChhHhHHHHHHHHHHHHHhcCCchhheeHHHhhc
Confidence 22333333333322 22666777888999999999999999999999999864
No 290
>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun
Probab=100.00 E-value=1.9e-36 Score=292.68 Aligned_cols=249 Identities=24% Similarity=0.422 Sum_probs=197.0
Q ss_pred ccccccccccccceeEEEEEecCCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCCCCccccce
Q 011360 193 CFASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQIRHRNILPLLA 272 (487)
Q Consensus 193 ~~~~~~~lg~G~~g~v~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~ 272 (487)
.|...+.||.|++|.||++.. ..++..+++|++.. ........+.+|+.+++.++||||+++++
T Consensus 20 ~~~~~~~lg~g~~g~v~~~~~-~~~~~~~~iK~~~~---------------~~~~~~~~~~~e~~~l~~~~h~~vv~~~~ 83 (285)
T cd06648 20 YLDNFVKIGEGSTGIVCIATD-KSTGRQVAVKKMDL---------------RKQQRRELLFNEVVIMRDYQHPNIVEMYS 83 (285)
T ss_pred hhhcceEeccCCCeEEEEEEE-CCCCCEEEEEEEec---------------cchhHHHHHHHHHHHHHHcCCCChheEEE
Confidence 356668999999999999974 45788999998732 11123445788999999999999999999
Q ss_pred EEecCCeeEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCCEE
Q 011360 273 HMVRPDCHLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVLLNDDMEAC 352 (487)
Q Consensus 273 ~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nill~~~~~~k 352 (487)
++...+..++++||+++++|.+++.. ..+++..+..++.|++.||+|| |++|++||||+|+||+++.++.++
T Consensus 84 ~~~~~~~~~~v~e~~~~~~L~~~~~~-----~~~~~~~~~~~~~ql~~~l~~l---H~~~i~H~dl~p~Nil~~~~~~~~ 155 (285)
T cd06648 84 SYLVGDELWVVMEFLEGGALTDIVTH-----TRMNEEQIATVCLAVLKALSFL---HAQGVIHRDIKSDSILLTSDGRVK 155 (285)
T ss_pred EEEcCCeEEEEEeccCCCCHHHHHHh-----CCCCHHHHHHHHHHHHHHHHHH---HhCCeecCCCChhhEEEcCCCcEE
Confidence 99999999999999999999998864 4588899999999999999999 778899999999999999999999
Q ss_pred EeccCCccccCCCCceeeEeeecccccccCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCccccCCCCccccHHHHHHH
Q 011360 353 ISDLGLAMAIPDGYTRVLISYVLGTMAYIAPEYFQQPELSEKCDIFSFGMLLISLVRGVPSFVFHQNGEEICSPEWLRKV 432 (487)
Q Consensus 353 l~DFg~s~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DvwslG~~l~elltg~~pf~~~~~~~~~~~~~~~~~~ 432 (487)
|+|||.+......... .....|++.|+|||.+.+..++.++||||||+++|+|++|..||.... ..+.....
T Consensus 156 l~d~g~~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGv~l~ell~g~~p~~~~~------~~~~~~~~ 227 (285)
T cd06648 156 LSDFGFCAQVSKEVPR--RKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMVDGEPPYFNEP------PLQAMKRI 227 (285)
T ss_pred EcccccchhhccCCcc--cccccCCccccCHHHhcCCCCCCcccHHHHHHHHHHHHhCCCCCcCCC------HHHHHHHH
Confidence 9999988655432211 123458899999999988889999999999999999999999984322 12222222
Q ss_pred HhcCCCCCccCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCChHHHHH
Q 011360 433 MNSKNPSRAIDPRLPGNGYEKKMLHVLKIAYICTLHDPEERPNSQYVRC 481 (487)
Q Consensus 433 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~~il~ 481 (487)
... .+..... ....+..+.+++.+||+.+|++|||+.++++
T Consensus 228 ~~~-~~~~~~~-------~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~ 268 (285)
T cd06648 228 RDN-LPPKLKN-------LHKVSPRLRSFLDRMLVRDPAQRATAAELLN 268 (285)
T ss_pred Hhc-CCCCCcc-------cccCCHHHHHHHHHHcccChhhCcCHHHHcc
Confidence 222 1111100 0112356899999999999999999999985
No 291
>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of
Probab=100.00 E-value=4.1e-36 Score=286.49 Aligned_cols=253 Identities=26% Similarity=0.412 Sum_probs=203.7
Q ss_pred ccccccccccccceeEEEEEecCCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCCCCccccce
Q 011360 193 CFASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQIRHRNILPLLA 272 (487)
Q Consensus 193 ~~~~~~~lg~G~~g~v~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~ 272 (487)
+|.+.+.||.|++|.||+|... .+++.|++|++.... .......+..|+..+..++||||+++++
T Consensus 2 ~~~~~~~i~~g~~~~v~~~~~~-~~~~~~~vk~~~~~~--------------~~~~~~~~~~e~~~l~~l~~~~i~~~~~ 66 (264)
T cd06623 2 DLERVKVLGQGSSGVVYKVRHK-PTGKIYALKKIHVDG--------------DEEFRKQLLRELKTLRSCESPYVVKCYG 66 (264)
T ss_pred cceeeeeeeecCCeEEEEEEEc-CCCcEEEEEEeccCc--------------chHHHHHHHHHHHHHHhcCCCCeeeEEE
Confidence 5888999999999999999764 478999999874311 1134567889999999999999999999
Q ss_pred EEecCCeeEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCC-CCeeecCCCCCCEEeCCCCCE
Q 011360 273 HMVRPDCHLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHS-ASIIHGDIKPRNVLLNDDMEA 351 (487)
Q Consensus 273 ~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~-~givH~Dlkp~Nill~~~~~~ 351 (487)
++...+..++||||+++++|.+++.. ...+++..+..++.|++.||.|| |+ .|++||||+|+||+++.++.+
T Consensus 67 ~~~~~~~~~lv~e~~~~~~L~~~l~~----~~~l~~~~~~~~~~~l~~~l~~l---h~~~~~~H~~l~~~ni~~~~~~~~ 139 (264)
T cd06623 67 AFYKEGEISIVLEYMDGGSLADLLKK----VGKIPEPVLAYIARQILKGLDYL---HTKRHIIHRDIKPSNLLINSKGEV 139 (264)
T ss_pred EEccCCeEEEEEEecCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHH---hccCCCccCCCCHHHEEECCCCCE
Confidence 99999999999999999999999975 36789999999999999999999 77 899999999999999999999
Q ss_pred EEeccCCccccCCCCceeeEeeecccccccCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCccccCCCCccccHHHHHH
Q 011360 352 CISDLGLAMAIPDGYTRVLISYVLGTMAYIAPEYFQQPELSEKCDIFSFGMLLISLVRGVPSFVFHQNGEEICSPEWLRK 431 (487)
Q Consensus 352 kl~DFg~s~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DvwslG~~l~elltg~~pf~~~~~~~~~~~~~~~~~ 431 (487)
+|+|||.+.......... ....++..|+|||.+.+..++.++|+||||+++|+|+||..||...... ...+....
T Consensus 140 ~l~df~~~~~~~~~~~~~--~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~---~~~~~~~~ 214 (264)
T cd06623 140 KIADFGISKVLENTLDQC--NTFVGTVTYMSPERIQGESYSYAADIWSLGLTLLECALGKFPFLPPGQP---SFFELMQA 214 (264)
T ss_pred EEccCccceecccCCCcc--cceeecccccCHhhhCCCCCCchhhHHHHHHHHHHHHhCCCCCcccccc---CHHHHHHH
Confidence 999999988764433221 2345788999999999889999999999999999999999999554321 11122222
Q ss_pred HHhcCCCCCccCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCChHHHHH
Q 011360 432 VMNSKNPSRAIDPRLPGNGYEKKMLHVLKIAYICTLHDPEERPNSQYVRC 481 (487)
Q Consensus 432 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~~il~ 481 (487)
...... ..++.. ..+..+.+++.+||..+|++|||+.++++
T Consensus 215 ~~~~~~--~~~~~~-------~~~~~l~~li~~~l~~~p~~R~~~~~ll~ 255 (264)
T cd06623 215 ICDGPP--PSLPAE-------EFSPEFRDFISACLQKDPKKRPSAAELLQ 255 (264)
T ss_pred HhcCCC--CCCCcc-------cCCHHHHHHHHHHccCChhhCCCHHHHHh
Confidence 221111 111111 13356899999999999999999999986
No 292
>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int
Probab=100.00 E-value=2.9e-36 Score=290.16 Aligned_cols=249 Identities=28% Similarity=0.428 Sum_probs=198.6
Q ss_pred cccccccccccccceeEEEEEecCCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCCCCccccc
Q 011360 192 DCFASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQIRHRNILPLL 271 (487)
Q Consensus 192 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~ 271 (487)
+.|...+.||.|+||.||+|.. ..++..||+|.+.. .........+.+|+.++..++||||++++
T Consensus 4 ~~~~~~~~ig~G~~~~vy~~~~-~~~~~~~aiK~~~~--------------~~~~~~~~~~~~e~~~l~~l~h~~iv~~~ 68 (277)
T cd06641 4 ELFTKLEKIGKGSFGEVFKGID-NRTQKVVAIKIIDL--------------EEAEDEIEDIQQEITVLSQCDSPYVTKYY 68 (277)
T ss_pred HhhhhheeEeecCCeEEEEEEE-CCCCcEEEEEEecc--------------ccchHHHHHHHHHHHHHHhcCCCCEeEEE
Confidence 3588889999999999999964 45788999998632 11122346788899999999999999999
Q ss_pred eEEecCCeeEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCCE
Q 011360 272 AHMVRPDCHLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVLLNDDMEA 351 (487)
Q Consensus 272 ~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nill~~~~~~ 351 (487)
+++..++..++||||+++++|.+++.. ..+++..+..++.|++.|+.|| |+.|++|+||+|+||+++.++.+
T Consensus 69 ~~~~~~~~~~lv~e~~~~~~l~~~i~~-----~~~~~~~~~~~~~~l~~~l~~l---h~~~i~h~dl~p~Ni~i~~~~~~ 140 (277)
T cd06641 69 GSYLKDTKLWIIMEYLGGGSALDLLEP-----GPLDETQIATILREILKGLDYL---HSEKKIHRDIKAANVLLSEHGEV 140 (277)
T ss_pred EEEEeCCeEEEEEEeCCCCcHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHH---ccCCeecCCCCHHhEEECCCCCE
Confidence 999999999999999999999998863 4688999999999999999999 78899999999999999999999
Q ss_pred EEeccCCccccCCCCceeeEeeecccccccCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCccccCCCCccccHHHHHH
Q 011360 352 CISDLGLAMAIPDGYTRVLISYVLGTMAYIAPEYFQQPELSEKCDIFSFGMLLISLVRGVPSFVFHQNGEEICSPEWLRK 431 (487)
Q Consensus 352 kl~DFg~s~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DvwslG~~l~elltg~~pf~~~~~~~~~~~~~~~~~ 431 (487)
+|+|||++......... .....++..|+|||.+.+..++.++|+||||+++|+|++|..||..... ......
T Consensus 141 ~l~dfg~~~~~~~~~~~--~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~------~~~~~~ 212 (277)
T cd06641 141 KLADFGVAGQLTDTQIK--RNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELAKGEPPHSELHP------MKVLFL 212 (277)
T ss_pred EEeecccceecccchhh--hccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHcCCCCCCccch------HHHHHH
Confidence 99999998765432211 1234578899999999888889999999999999999999999943221 111221
Q ss_pred HHhcCCCCCccCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCChHHHHH
Q 011360 432 VMNSKNPSRAIDPRLPGNGYEKKMLHVLKIAYICTLHDPEERPNSQYVRC 481 (487)
Q Consensus 432 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~~il~ 481 (487)
. ....+ ..++.. .+..+.+++.+||+.+|++||++.++++
T Consensus 213 ~-~~~~~-~~~~~~--------~~~~~~~~i~~~l~~~p~~Rp~~~~~l~ 252 (277)
T cd06641 213 I-PKNNP-PTLEGN--------YSKPLKEFVEACLNKEPSFRPTAKELLK 252 (277)
T ss_pred H-hcCCC-CCCCcc--------cCHHHHHHHHHHccCChhhCcCHHHHHh
Confidence 1 11111 111111 2355889999999999999999999987
No 293
>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their
Probab=100.00 E-value=1.9e-36 Score=289.71 Aligned_cols=259 Identities=23% Similarity=0.398 Sum_probs=200.2
Q ss_pred cccccccccccceeEEEEEecCCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCCCCccccceE
Q 011360 194 FASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQIRHRNILPLLAH 273 (487)
Q Consensus 194 ~~~~~~lg~G~~g~v~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~ 273 (487)
|...+.||.|++|.||++.. ..++..||+|.+....... .........+..|+.+++.++||||++++++
T Consensus 2 ~~~~~~lg~g~~~~v~~~~~-~~~~~~~alk~~~~~~~~~---------~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~ 71 (268)
T cd06630 2 WLKGQQLGTGAFSSCYQARD-VKTGTLMAVKQVTYVRNTS---------SEQEEVVEALRKEIRLMARLNHPHIIRMLGA 71 (268)
T ss_pred ccccceecCcCceEEEEEEE-cCCCcEEEEEEeecccCCc---------hhHHHHHHHHHHHHHHHHHcCCCceehhhce
Confidence 67788999999999999974 5688999999874321110 1112345678899999999999999999999
Q ss_pred EecCCeeEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCC-CEE
Q 011360 274 MVRPDCHLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVLLNDDM-EAC 352 (487)
Q Consensus 274 ~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nill~~~~-~~k 352 (487)
+.+.+..++||||+++++|.+++.. ...+++..+..++.|++.||.|| |++|++|+||+|+||+++.++ .++
T Consensus 72 ~~~~~~~~~v~e~~~~~~L~~~l~~----~~~~~~~~~~~~~~ql~~al~~L---H~~~i~H~~i~~~nil~~~~~~~~~ 144 (268)
T cd06630 72 TCEDSHFNLFVEWMAGGSVSHLLSK----YGAFKEAVIINYTEQLLRGLSYL---HENQIIHRDVKGANLLIDSTGQRLR 144 (268)
T ss_pred eccCCeEEEEEeccCCCcHHHHHHH----hCCCCHHHHHHHHHHHHHHHHHH---HhCCeecCCCCHHHEEEcCCCCEEE
Confidence 9999999999999999999999865 35688999999999999999999 778999999999999998776 599
Q ss_pred EeccCCccccCCCCce--eeEeeecccccccCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCccccCCCCccccHHHHH
Q 011360 353 ISDLGLAMAIPDGYTR--VLISYVLGTMAYIAPEYFQQPELSEKCDIFSFGMLLISLVRGVPSFVFHQNGEEICSPEWLR 430 (487)
Q Consensus 353 l~DFg~s~~~~~~~~~--~~~~~~~gt~~y~aPE~l~~~~~~~~~DvwslG~~l~elltg~~pf~~~~~~~~~~~~~~~~ 430 (487)
|+|||.+......... .......++..|+|||.+.+..++.++|+||+|+++|+|++|..||...... .......
T Consensus 145 l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~---~~~~~~~ 221 (268)
T cd06630 145 IADFGAAARLAAKGTGAGEFQGQLLGTIAFMAPEVLRGEQYGRSCDVWSVGCVIIEMATAKPPWNAEKHS---NHLALIF 221 (268)
T ss_pred EcccccccccccccccCCccccccccccceeCHhHhccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCc---chHHHHH
Confidence 9999998766433111 1112345788999999998888999999999999999999999999533221 1111111
Q ss_pred HHHhcCCCCCccCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCChHHHHH
Q 011360 431 KVMNSKNPSRAIDPRLPGNGYEKKMLHVLKIAYICTLHDPEERPNSQYVRC 481 (487)
Q Consensus 431 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~~il~ 481 (487)
...... .. +.. .......+.+++.+||..+|++|||+.+++.
T Consensus 222 ~~~~~~-~~----~~~----~~~~~~~~~~~i~~~l~~~p~~R~~~~~ll~ 263 (268)
T cd06630 222 KIASAT-TA----PSI----PEHLSPGLRDVTLRCLELQPEDRPPSRELLK 263 (268)
T ss_pred HHhccC-CC----CCC----chhhCHHHHHHHHHHcCCCcccCcCHHHHhc
Confidence 111111 11 111 1223456889999999999999999999874
No 294
>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the
Probab=100.00 E-value=1.6e-36 Score=293.95 Aligned_cols=258 Identities=22% Similarity=0.364 Sum_probs=192.6
Q ss_pred cccccccccccccceeEEEEEecCCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCCCCccccc
Q 011360 192 DCFASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQIRHRNILPLL 271 (487)
Q Consensus 192 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~ 271 (487)
+.|.+.+.||.|++|.||+|.. ..+++.||+|.+.... .......+.+|+.+++.++||||++++
T Consensus 5 ~~y~~~~~lg~g~~~~vy~~~~-~~~~~~~~iK~~~~~~--------------~~~~~~~~~~E~~~l~~l~h~~i~~~~ 69 (291)
T cd07844 5 ETYKKLDKLGEGSYATVYKGRS-KLTGQLVALKEIRLEH--------------EEGAPFTAIREASLLKDLKHANIVTLH 69 (291)
T ss_pred cceeEEEEEeecCCeEEEEEEE-cCCCcEEEEEEEeccc--------------ccCCchhHHHHHHHHhhCCCcceeeEE
Confidence 4699999999999999999974 4578899999874311 111123456799999999999999999
Q ss_pred eEEecCCeeEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCCE
Q 011360 272 AHMVRPDCHLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVLLNDDMEA 351 (487)
Q Consensus 272 ~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nill~~~~~~ 351 (487)
+++...+..++||||+. ++|.+++.. ....+++..+..++.|++.||.|| |+.|++||||+|+||+++.++.+
T Consensus 70 ~~~~~~~~~~lv~e~~~-~~L~~~~~~---~~~~~~~~~~~~~~~ql~~al~~l---H~~~i~H~dl~p~nil~~~~~~~ 142 (291)
T cd07844 70 DIIHTKKTLTLVFEYLD-TDLKQYMDD---CGGGLSMHNVRLFLFQLLRGLAYC---HQRRVLHRDLKPQNLLISERGEL 142 (291)
T ss_pred EEEecCCeEEEEEecCC-CCHHHHHHh---CCCCCCHHHHHHHHHHHHHHHHHH---HhCCeecccCCHHHEEEcCCCCE
Confidence 99999999999999997 499998864 234688999999999999999999 77889999999999999999999
Q ss_pred EEeccCCccccCCCCceeeEeeecccccccCCcccCC-CCCCchhHHHHHHHHHHHHHhCCCCccccCCCCccccHHHHH
Q 011360 352 CISDLGLAMAIPDGYTRVLISYVLGTMAYIAPEYFQQ-PELSEKCDIFSFGMLLISLVRGVPSFVFHQNGEEICSPEWLR 430 (487)
Q Consensus 352 kl~DFg~s~~~~~~~~~~~~~~~~gt~~y~aPE~l~~-~~~~~~~DvwslG~~l~elltg~~pf~~~~~~~~~~~~~~~~ 430 (487)
||+|||+++........ .....++..|+|||.+.+ ..++.++||||||+++|+|++|..||....... +...
T Consensus 143 kl~dfg~~~~~~~~~~~--~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~-----~~~~ 215 (291)
T cd07844 143 KLADFGLARAKSVPSKT--YSNEVVTLWYRPPDVLLGSTEYSTSLDMWGVGCIFYEMATGRPLFPGSTDVE-----DQLH 215 (291)
T ss_pred EECccccccccCCCCcc--ccccccccccCCcHHhhcCcccCcHHHHHHHHHHHHHHHhCCCCCCCCccHH-----HHHH
Confidence 99999998754322111 122346889999998865 468899999999999999999999995433110 1111
Q ss_pred HHHh---cCCCC---------------------CccCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCChHHHHH
Q 011360 431 KVMN---SKNPS---------------------RAIDPRLPGNGYEKKMLHVLKIAYICTLHDPEERPNSQYVRC 481 (487)
Q Consensus 431 ~~~~---~~~~~---------------------~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~~il~ 481 (487)
.... ...+. ..+....+. ......+.+++.+||+.+|++|||+.+++.
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~li~~~L~~~p~~Rps~~e~l~ 287 (291)
T cd07844 216 KIFRVLGTPTEETWPGVSSNPEFKPYSFPFYPPRPLINHAPR---LDRIPHGEELALKFLQYEPKKRISAAEAMK 287 (291)
T ss_pred HHHHhcCCCChhhhhhhhhccccccccccccCChhHHHhCcC---CCCchhHHHHHHHHhccCcccccCHHHHhc
Confidence 0100 00000 000000000 001256789999999999999999999875
No 295
>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent
Probab=100.00 E-value=2.1e-36 Score=291.00 Aligned_cols=249 Identities=24% Similarity=0.401 Sum_probs=196.1
Q ss_pred ccccccccccccceeEEEEEecCCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCC---CCCccc
Q 011360 193 CFASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQIR---HRNILP 269 (487)
Q Consensus 193 ~~~~~~~lg~G~~g~v~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~---hpnIv~ 269 (487)
.|...+.||.|+||.||+|.+ ..++..||+|.+... ........+.+|+.+++.+. |||+++
T Consensus 2 ~y~~~~~l~~g~~g~v~~~~~-~~~~~~~~iK~~~~~--------------~~~~~~~~~~~e~~~l~~l~~~~~~~vi~ 66 (277)
T cd06917 2 LYQRLELIGRGAYGAVYRGKH-VPTGRVVALKIINLD--------------TPDDDVSDIQREVALLSQLRQSQPPNITK 66 (277)
T ss_pred hhhhhhheeccCCceEEEEEE-cCCCcEEEEEEecCC--------------CCchhHHHHHHHHHHHHHhccCCCCCeee
Confidence 477889999999999999975 457889999987321 11223456677888888886 999999
Q ss_pred cceEEecCCeeEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCC
Q 011360 270 LLAHMVRPDCHLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVLLNDDM 349 (487)
Q Consensus 270 l~~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nill~~~~ 349 (487)
+++++......++||||+++++|.+++.. ..+++..+..++.|++.||.|| |+.|++|+||+|+||+++.++
T Consensus 67 ~~~~~~~~~~~~lv~e~~~~~~L~~~~~~-----~~l~~~~~~~i~~~i~~~l~~l---h~~~i~H~dl~p~ni~i~~~~ 138 (277)
T cd06917 67 YYGSYLKGPRLWIIMEYAEGGSVRTLMKA-----GPIAEKYISVIIREVLVALKYI---HKVGVIHRDIKAANILVTNTG 138 (277)
T ss_pred EeeeeeeCCEEEEEEecCCCCcHHHHHHc-----cCCCHHHHHHHHHHHHHHHHHH---HhCCcccCCcCHHHEEEcCCC
Confidence 99999999999999999999999998863 3688999999999999999999 778899999999999999999
Q ss_pred CEEEeccCCccccCCCCceeeEeeecccccccCCcccCCC-CCCchhHHHHHHHHHHHHHhCCCCccccCCCCccccHHH
Q 011360 350 EACISDLGLAMAIPDGYTRVLISYVLGTMAYIAPEYFQQP-ELSEKCDIFSFGMLLISLVRGVPSFVFHQNGEEICSPEW 428 (487)
Q Consensus 350 ~~kl~DFg~s~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~-~~~~~~DvwslG~~l~elltg~~pf~~~~~~~~~~~~~~ 428 (487)
.++|+|||++......... .....|+..|+|||.+.++ .++.++|+||||+++|+|++|..||...... ..
T Consensus 139 ~~~l~dfg~~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~------~~ 210 (277)
T cd06917 139 NVKLCDFGVAALLNQNSSK--RSTFVGTPYWMAPEVITEGKYYDTKADIWSLGITIYEMATGNPPYSDVDAF------RA 210 (277)
T ss_pred CEEEccCCceeecCCCccc--cccccCCcceeCHHHhccCCccccchhHHHHHHHHHHHHhCCCCCCCCChh------hh
Confidence 9999999998876544321 1334688999999988754 5789999999999999999999999543221 11
Q ss_pred HHHHHhcCCCCCccCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCChHHHHH
Q 011360 429 LRKVMNSKNPSRAIDPRLPGNGYEKKMLHVLKIAYICTLHDPEERPNSQYVRC 481 (487)
Q Consensus 429 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~~il~ 481 (487)
.. ......+ +.++.. ..+.++.+++.+||..||++|||+.+++.
T Consensus 211 ~~-~~~~~~~-----~~~~~~---~~~~~~~~~i~~~l~~~p~~R~~~~~il~ 254 (277)
T cd06917 211 MM-LIPKSKP-----PRLEDN---GYSKLLREFVAACLDEEPKERLSAEELLK 254 (277)
T ss_pred hh-ccccCCC-----CCCCcc---cCCHHHHHHHHHHcCCCcccCcCHHHHhh
Confidence 11 1111111 112211 13456889999999999999999999875
No 296
>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase. Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea
Probab=100.00 E-value=2.1e-36 Score=292.19 Aligned_cols=261 Identities=26% Similarity=0.363 Sum_probs=198.2
Q ss_pred ccccccccccccceeEEEEEecCCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCCCCccccce
Q 011360 193 CFASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQIRHRNILPLLA 272 (487)
Q Consensus 193 ~~~~~~~lg~G~~g~v~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~ 272 (487)
+|.+.+.||.|++|.||+|.. ..+|..||+|++.... ........+.+|+.++++++||||+++++
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~-~~~~~~~~vK~~~~~~-------------~~~~~~~~~~~e~~~l~~~~~~~i~~~~~ 66 (286)
T cd07832 1 RYKILGRIGEGAHGIVFKAKD-RETGETVALKKVALRR-------------LEGGIPNQALREIKALQACQHPYVVKLLD 66 (286)
T ss_pred CceEEeecccCCCcEEEEEEE-CCCCceEEEEEEEccc-------------ccchhhHHHHHHHHHHHhCCCCCCcceee
Confidence 378889999999999999975 3578899999884311 11223456788999999999999999999
Q ss_pred EEecCCeeEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCCEE
Q 011360 273 HMVRPDCHLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVLLNDDMEAC 352 (487)
Q Consensus 273 ~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nill~~~~~~k 352 (487)
++......++||||+ +++|.+++... ...+++..+..++.|++.||.|| |+.|++|+||+|+||+++.++.++
T Consensus 67 ~~~~~~~~~~v~e~~-~~~L~~~~~~~---~~~~~~~~~~~~~~~i~~~l~~l---H~~~i~H~dl~p~ni~~~~~~~~~ 139 (286)
T cd07832 67 VFPHGSGFVLVMEYM-PSDLSEVLRDE---ERPLPEAQVKSYMRMLLKGVAYM---HANGIMHRDLKPANLLISADGVLK 139 (286)
T ss_pred EEecCCeeEEEeccc-CCCHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHH---HHCCeecCCcCHHHEEEcCCCcEE
Confidence 999999999999999 99999998642 35689999999999999999999 678899999999999999999999
Q ss_pred EeccCCccccCCCCceeeEeeecccccccCCcccCCC-CCCchhHHHHHHHHHHHHHhCCCCccccCCCCccccHHHHHH
Q 011360 353 ISDLGLAMAIPDGYTRVLISYVLGTMAYIAPEYFQQP-ELSEKCDIFSFGMLLISLVRGVPSFVFHQNGEEICSPEWLRK 431 (487)
Q Consensus 353 l~DFg~s~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~-~~~~~~DvwslG~~l~elltg~~pf~~~~~~~~~~~~~~~~~ 431 (487)
|+|||++......... ......++..|+|||.+.+. .++.++||||+|+++|+|+||.+||....+. +....
T Consensus 140 l~dfg~~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~------~~~~~ 212 (286)
T cd07832 140 IADFGLARLFSEEEPR-LYSHQVATRWYRAPELLYGARKYDPGVDLWAVGCIFAELLNGSPLFPGENDI------EQLAI 212 (286)
T ss_pred EeeeeecccccCCCCC-ccccccCcccccCceeeeccccCCchhHHHHHHHHHHHHHcCCcCcCCCCHH------HHHHH
Confidence 9999998876543221 11334688999999988654 5689999999999999999998888443221 11111
Q ss_pred HHhc-CCCCC--------------ccCCCCC----CCCcHHHHHHHHHHHhhccCCCCCCCCChHHHHH
Q 011360 432 VMNS-KNPSR--------------AIDPRLP----GNGYEKKMLHVLKIAYICTLHDPEERPNSQYVRC 481 (487)
Q Consensus 432 ~~~~-~~~~~--------------~~~~~~~----~~~~~~~~~~l~~li~~cl~~~P~~RPs~~~il~ 481 (487)
.... ..+.. ..-+..+ ..........+.+++.+||..+|++|||+++++.
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~ 281 (286)
T cd07832 213 VFRTLGTPNEETWPGLTSLPDYNKITFPESKPIPLEEIFPDASPEALDLLKGLLVYDPSKRLSAAEALR 281 (286)
T ss_pred HHHHcCCCChHHHhhccCcchhhcccCCCCCcchHHHhCCCccHHHHHHHHHHhccChhhCCCHHHHhh
Confidence 1110 00000 0000000 0011123467899999999999999999999875
No 297
>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins. Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily
Probab=100.00 E-value=4.8e-36 Score=293.08 Aligned_cols=250 Identities=28% Similarity=0.394 Sum_probs=195.7
Q ss_pred ccccccccccccccceeEEEEEecCCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCCCCcccc
Q 011360 191 EDCFASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQIRHRNILPL 270 (487)
Q Consensus 191 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l 270 (487)
.+.|...+.||.|+||.||+|... .++..||+|++.... .........+.+|+.+++.++||||+++
T Consensus 14 ~~~y~~~~~lg~g~~g~vy~~~~~-~~~~~v~iK~~~~~~------------~~~~~~~~~~~~Ei~~l~~l~h~niv~~ 80 (307)
T cd06607 14 EKLFTDLREIGHGSFGAVYFARDV-RTNEVVAIKKMSYSG------------KQSNEKWQDIIKEVRFLQQLRHPNTIEY 80 (307)
T ss_pred chhhhhheeecCCCCeEEEEEEEc-CCCcEEEEEEEeccc------------cCcHHHHHHHHHHHHHHHhCCCCCEEEE
Confidence 346889999999999999999753 578899999874311 1122334567889999999999999999
Q ss_pred ceEEecCCeeEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCC
Q 011360 271 LAHMVRPDCHLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVLLNDDME 350 (487)
Q Consensus 271 ~~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nill~~~~~ 350 (487)
++++...+..|+||||+. |+|.+++.. ....+++..+..++.|++.||.|| |+.|++||||+|+||+++.++.
T Consensus 81 ~~~~~~~~~~~lv~e~~~-g~l~~~~~~---~~~~l~~~~~~~~~~ql~~~L~~L---H~~~i~H~dl~p~nIl~~~~~~ 153 (307)
T cd06607 81 KGCYLREHTAWLVMEYCL-GSASDILEV---HKKPLQEVEIAAICHGALQGLAYL---HSHERIHRDIKAGNILLTEPGT 153 (307)
T ss_pred EEEEEeCCeEEEEHHhhC-CCHHHHHHH---cccCCCHHHHHHHHHHHHHHHHHH---HHCCceecCCCcccEEECCCCC
Confidence 999999999999999996 577777653 234689999999999999999999 7788999999999999999999
Q ss_pred EEEeccCCccccCCCCceeeEeeecccccccCCcccC---CCCCCchhHHHHHHHHHHHHHhCCCCccccCCCCccccHH
Q 011360 351 ACISDLGLAMAIPDGYTRVLISYVLGTMAYIAPEYFQ---QPELSEKCDIFSFGMLLISLVRGVPSFVFHQNGEEICSPE 427 (487)
Q Consensus 351 ~kl~DFg~s~~~~~~~~~~~~~~~~gt~~y~aPE~l~---~~~~~~~~DvwslG~~l~elltg~~pf~~~~~~~~~~~~~ 427 (487)
++|+|||++...... ....+++.|+|||++. ...++.++||||||+++|+|+||.+||..... ..
T Consensus 154 ~kL~dfg~~~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~s~G~il~el~tg~~p~~~~~~------~~ 221 (307)
T cd06607 154 VKLADFGSASLVSPA------NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNA------MS 221 (307)
T ss_pred EEEeecCcceecCCC------CCccCCccccCceeeeccCCCCCCcccchHHHHHHHHHHHcCCCCCCCccH------HH
Confidence 999999998755332 2345788999999874 45688999999999999999999999843221 11
Q ss_pred HHHHHHhcCCCCCccCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCChHHHHH
Q 011360 428 WLRKVMNSKNPSRAIDPRLPGNGYEKKMLHVLKIAYICTLHDPEERPNSQYVRC 481 (487)
Q Consensus 428 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~~il~ 481 (487)
...... ...+.. . .....+..+.+++.+||+.+|++|||+.+|+.
T Consensus 222 ~~~~~~-~~~~~~-----~---~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 266 (307)
T cd06607 222 ALYHIA-QNDSPT-----L---SSNDWSDYFRNFVDSCLQKIPQDRPSSEELLK 266 (307)
T ss_pred HHHHHh-cCCCCC-----C---CchhhCHHHHHHHHHHhcCChhhCcCHHHHhc
Confidence 111111 111111 1 11224467899999999999999999999976
No 298
>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4
Probab=100.00 E-value=3.7e-36 Score=286.93 Aligned_cols=255 Identities=25% Similarity=0.403 Sum_probs=200.0
Q ss_pred ccccccccccccceeEEEEEecCCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCCCCccccce
Q 011360 193 CFASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQIRHRNILPLLA 272 (487)
Q Consensus 193 ~~~~~~~lg~G~~g~v~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~ 272 (487)
+|.+.+.||.|+||.||+|.. ..++..|++|.+... .......+.+..|+.+++.++||||+++++
T Consensus 1 ~y~~~~~lg~G~~~~v~~~~~-~~~~~~~~ik~~~~~-------------~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~ 66 (264)
T cd06626 1 RWQRGNKIGGGTFGKVYTAVN-LDTGELMAVKEIRIQ-------------DNDPKTIKEIADEMKVLELLKHPNLVKYYG 66 (264)
T ss_pred CceeeeEeecCCCcEEEEEEE-CCCCcEEEEEEEECc-------------ccchHHHHHHHHHHHHHHhCCCCChhheee
Confidence 378889999999999999975 357889999987431 111345678899999999999999999999
Q ss_pred EEecCCeeEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCCEE
Q 011360 273 HMVRPDCHLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVLLNDDMEAC 352 (487)
Q Consensus 273 ~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nill~~~~~~k 352 (487)
.+...+..++|+||+++++|.+++.. +..+++..+..++.|++.||.|| |+.|++|+||+|+||+++.++.+|
T Consensus 67 ~~~~~~~~~lv~e~~~~~~L~~~~~~----~~~~~~~~~~~i~~~i~~~l~~l---h~~~i~H~dl~~~nil~~~~~~~k 139 (264)
T cd06626 67 VEVHREKVYIFMEYCSGGTLEELLEH----GRILDEHVIRVYTLQLLEGLAYL---HSHGIVHRDIKPANIFLDHNGVIK 139 (264)
T ss_pred eEecCCEEEEEEecCCCCcHHHHHhh----cCCCChHHHHHHHHHHHHHHHHH---HHCCcccCCCCHHHEEECCCCCEE
Confidence 99999999999999999999999864 34578889999999999999999 677899999999999999999999
Q ss_pred EeccCCccccCCCCceee--EeeecccccccCCcccCCCC---CCchhHHHHHHHHHHHHHhCCCCccccCCCCccccHH
Q 011360 353 ISDLGLAMAIPDGYTRVL--ISYVLGTMAYIAPEYFQQPE---LSEKCDIFSFGMLLISLVRGVPSFVFHQNGEEICSPE 427 (487)
Q Consensus 353 l~DFg~s~~~~~~~~~~~--~~~~~gt~~y~aPE~l~~~~---~~~~~DvwslG~~l~elltg~~pf~~~~~~~~~~~~~ 427 (487)
|+|||++........... .....+++.|+|||++.+.. ++.++||||||+++|++++|..||...... ..
T Consensus 140 l~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~~~Dv~s~G~il~~l~~g~~pf~~~~~~-----~~ 214 (264)
T cd06626 140 LGDFGCAVKLKNNTTTMGEEVQSLAGTPAYMAPEVITGGKGKGHGRAADIWSLGCVVLEMATGKRPWSELDNE-----FQ 214 (264)
T ss_pred EcccccccccCCCCCcccccccCCcCCcCccChhhccCCCCCCCCcccchHHHHHHHHHHHhCCCCccCCcch-----HH
Confidence 999999887654332211 11345788999999998765 889999999999999999999999533211 11
Q ss_pred HHHHHHhcCCCCCccCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCChHHHHH
Q 011360 428 WLRKVMNSKNPSRAIDPRLPGNGYEKKMLHVLKIAYICTLHDPEERPNSQYVRC 481 (487)
Q Consensus 428 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~~il~ 481 (487)
...... .. . .+.++.. ......+.+++.+||+.+|++|||+.+++.
T Consensus 215 ~~~~~~-~~-~----~~~~~~~--~~~~~~~~~li~~~l~~~p~~R~~~~~i~~ 260 (264)
T cd06626 215 IMFHVG-AG-H----KPPIPDS--LQLSPEGKDFLDRCLESDPKKRPTASELLQ 260 (264)
T ss_pred HHHHHh-cC-C----CCCCCcc--cccCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence 111111 11 1 1112211 112355789999999999999999999874
No 299
>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is
Probab=100.00 E-value=3.8e-36 Score=292.41 Aligned_cols=262 Identities=26% Similarity=0.348 Sum_probs=196.1
Q ss_pred cccccccccccceeEEEEEecCCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCCCCccccceE
Q 011360 194 FASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQIRHRNILPLLAH 273 (487)
Q Consensus 194 ~~~~~~lg~G~~g~v~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~ 273 (487)
|.+.+.||.|++|.||+|.. ..++..||+|++....... ........+..|+.+++.++||||++++++
T Consensus 2 y~~~~~lg~g~~~~vy~~~~-~~~~~~v~iK~~~~~~~~~----------~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~ 70 (298)
T cd07841 2 YEKGKKLGEGTYAVVYKARD-KETGRIVAIKKIKLGERKE----------AKDGINFTALREIKLLQELKHPNIIGLLDV 70 (298)
T ss_pred ceeeeeeeeccccEEEEEEE-CCCCcEEEEEEEecccccc----------ccchhhHHHHHHHHHHhhcCCCCChhhhhe
Confidence 77788999999999999975 3568899999985421110 012233456779999999999999999999
Q ss_pred EecCCeeEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCCEEE
Q 011360 274 MVRPDCHLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVLLNDDMEACI 353 (487)
Q Consensus 274 ~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nill~~~~~~kl 353 (487)
+.+.+..++||||+ +|+|.+++.. ....+++..+..++.|++.||.|| |++|++|+||+|+||+++.++.++|
T Consensus 71 ~~~~~~~~lv~e~~-~~~L~~~i~~---~~~~~~~~~~~~~~~qi~~al~~l---H~~~i~H~dl~p~nill~~~~~~~l 143 (298)
T cd07841 71 FGHKSNINLVFEFM-ETDLEKVIKD---KSIVLTPADIKSYMLMTLRGLEYL---HSNWILHRDLKPNNLLIASDGVLKL 143 (298)
T ss_pred eecCCEEEEEEccc-CCCHHHHHhc---cCCCCCHHHHHHHHHHHHHHHHHH---HhCCeeecCCChhhEEEcCCCCEEE
Confidence 99999999999999 9999999864 123689999999999999999999 7889999999999999999999999
Q ss_pred eccCCccccCCCCceeeEeeecccccccCCcccCC-CCCCchhHHHHHHHHHHHHHhCCCCccccCCCCccccHHHHHHH
Q 011360 354 SDLGLAMAIPDGYTRVLISYVLGTMAYIAPEYFQQ-PELSEKCDIFSFGMLLISLVRGVPSFVFHQNGEEICSPEWLRKV 432 (487)
Q Consensus 354 ~DFg~s~~~~~~~~~~~~~~~~gt~~y~aPE~l~~-~~~~~~~DvwslG~~l~elltg~~pf~~~~~~~~~~~~~~~~~~ 432 (487)
+|||++......... .....+++.|+|||.+.+ ..++.++|||||||++|+|++|.+||....+. +.....
T Consensus 144 ~dfg~~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~e~~~g~~~~~~~~~~------~~~~~~ 215 (298)
T cd07841 144 ADFGLARSFGSPNRK--MTHQVVTRWYRAPELLFGARHYGVGVDMWSVGCIFAELLLRVPFLPGDSDI------DQLGKI 215 (298)
T ss_pred ccceeeeeccCCCcc--ccccccceeeeCHHHHhCCCCCCcHHHHHHHHHHHHHHHcCCccccCCccH------HHHHHH
Confidence 999999876443221 123346788999998854 46789999999999999999998887543221 111111
Q ss_pred Hhc-CCC-----------CCccC----CCCC-CCCcHHHHHHHHHHHhhccCCCCCCCCChHHHHH
Q 011360 433 MNS-KNP-----------SRAID----PRLP-GNGYEKKMLHVLKIAYICTLHDPEERPNSQYVRC 481 (487)
Q Consensus 433 ~~~-~~~-----------~~~~~----~~~~-~~~~~~~~~~l~~li~~cl~~~P~~RPs~~~il~ 481 (487)
... ..+ ..... +..+ .......+..+.+++.+||..+|++|||+.+++.
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~e~l~ 281 (298)
T cd07841 216 FEALGTPTEENWPGVTSLPDYVEFKPFPPTPLKQIFPAASDDALDLLQRLLTLNPNKRITARQALE 281 (298)
T ss_pred HHHcCCCchhhhhhcccccccccccccCCcchhhhcccccHHHHHHHHHHhcCCcccCcCHHHHhh
Confidence 110 000 00000 0000 0011233567889999999999999999999986
No 300
>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.
Probab=100.00 E-value=3.9e-36 Score=285.59 Aligned_cols=252 Identities=22% Similarity=0.344 Sum_probs=198.8
Q ss_pred ccccccccccccceeEEEEEecCCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCCCCccccce
Q 011360 193 CFASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQIRHRNILPLLA 272 (487)
Q Consensus 193 ~~~~~~~lg~G~~g~v~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~ 272 (487)
+|.+.+.||.|+||.||++.. ..++..+|+|.+.. ..........+.+|+.+++.++||||+++++
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~-~~~~~~~~ik~~~~-------------~~~~~~~~~~~~~E~~~l~~~~h~~i~~~~~ 66 (257)
T cd08225 1 RYEIIKKIGEGSFGKIYLAKA-KSDSEHCVIKEIDL-------------TKMPVKEKEASKKEVILLAKMKHPNIVTFFA 66 (257)
T ss_pred CceEEEEecCCCcceEEEEEE-cCCCceEEEEEeeH-------------hhccchhhHHHHHHHHHHHhCCCCChhhhhh
Confidence 377889999999999999975 45788899998732 1111223456778999999999999999999
Q ss_pred EEecCCeeEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCC-E
Q 011360 273 HMVRPDCHLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVLLNDDME-A 351 (487)
Q Consensus 273 ~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nill~~~~~-~ 351 (487)
.+...+..++|+||+++++|.+++.. .....+++..+..++.|++.||.|| |+.+++|+||+|+||++++++. +
T Consensus 67 ~~~~~~~~~lv~e~~~~~~L~~~~~~--~~~~~~~~~~~~~~~~~l~~~l~~l---h~~~i~H~dl~~~nil~~~~~~~~ 141 (257)
T cd08225 67 SFQENGRLFIVMEYCDGGDLMKRINR--QRGVLFSEDQILSWFVQISLGLKHI---HDRKILHRDIKSQNIFLSKNGMVA 141 (257)
T ss_pred eeccCCeEEEEEecCCCCcHHHHHHh--ccCCCCCHHHHHHHHHHHHHHHHHH---HHCCcccccCCHHHEEEcCCCCeE
Confidence 99999999999999999999999865 2334578999999999999999999 6778999999999999998864 6
Q ss_pred EEeccCCccccCCCCceeeEeeecccccccCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCccccCCCCccccHHHHHH
Q 011360 352 CISDLGLAMAIPDGYTRVLISYVLGTMAYIAPEYFQQPELSEKCDIFSFGMLLISLVRGVPSFVFHQNGEEICSPEWLRK 431 (487)
Q Consensus 352 kl~DFg~s~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DvwslG~~l~elltg~~pf~~~~~~~~~~~~~~~~~ 431 (487)
+|+|||.+......... .....|++.|+|||++.+..++.++|+||||+++|+|++|..||.... .......
T Consensus 142 ~l~d~~~~~~~~~~~~~--~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~------~~~~~~~ 213 (257)
T cd08225 142 KLGDFGIARQLNDSMEL--AYTCVGTPYYLSPEICQNRPYNNKTDIWSLGCVLYELCTLKHPFEGNN------LHQLVLK 213 (257)
T ss_pred EecccccchhccCCccc--ccccCCCccccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCcc------HHHHHHH
Confidence 99999998776443221 123458899999999988889999999999999999999999994322 2223332
Q ss_pred HHhcCCCCCccCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCChHHHHH
Q 011360 432 VMNSKNPSRAIDPRLPGNGYEKKMLHVLKIAYICTLHDPEERPNSQYVRC 481 (487)
Q Consensus 432 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~~il~ 481 (487)
....... .+.+ ..+.++.+++.+||..+|++|||+.++++
T Consensus 214 ~~~~~~~--~~~~--------~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~ 253 (257)
T cd08225 214 ICQGYFA--PISP--------NFSRDLRSLISQLFKVSPRDRPSITSILK 253 (257)
T ss_pred HhcccCC--CCCC--------CCCHHHHHHHHHHhccChhhCcCHHHHhh
Confidence 2222111 1111 12356889999999999999999999975
No 301
>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex
Probab=100.00 E-value=1.8e-36 Score=292.45 Aligned_cols=260 Identities=25% Similarity=0.341 Sum_probs=194.2
Q ss_pred cccccccccccceeEEEEEecCCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCCCCccccceE
Q 011360 194 FASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQIRHRNILPLLAH 273 (487)
Q Consensus 194 ~~~~~~lg~G~~g~v~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~ 273 (487)
|+.++.||.|++|.||+|.. ..++..||||++... .........+.+|+.++++++||||++++++
T Consensus 2 y~~~~~l~~g~~~~v~~~~~-~~~~~~~~ik~~~~~-------------~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~ 67 (284)
T cd07860 2 FQKVEKIGEGTYGVVYKARN-KLTGEVVALKKIRLD-------------TETEGVPSTAIREISLLKELNHPNIVKLLDV 67 (284)
T ss_pred ceeeeeecCCCceEEEEEEE-CCCCCEEEEEEcccc-------------ccccccchHHHHHHHHHHhcCCCCCcchhhh
Confidence 78889999999999999975 457889999987321 1112223467889999999999999999999
Q ss_pred EecCCeeEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCCEEE
Q 011360 274 MVRPDCHLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVLLNDDMEACI 353 (487)
Q Consensus 274 ~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nill~~~~~~kl 353 (487)
+.+.+..++||||+. ++|.+++.. .....+++..+..++.|++.||+|| |+.|++|+||+|+||+++.++.+||
T Consensus 68 ~~~~~~~~~v~e~~~-~~l~~~~~~--~~~~~l~~~~~~~~~~~i~~~l~~l---h~~~i~H~~l~p~nill~~~~~~~l 141 (284)
T cd07860 68 IHTENKLYLVFEFLH-QDLKKFMDA--SPLSGIPLPLIKSYLFQLLQGLAFC---HSHRVLHRDLKPQNLLINTEGAIKL 141 (284)
T ss_pred cccCCcEEEEeeccc-cCHHHHHHh--CCCCCCCHHHHHHHHHHHHHHHHHH---HHCCeecCCCCHHHEEECCCCCEEE
Confidence 999999999999995 689888864 2345689999999999999999999 6778999999999999999999999
Q ss_pred eccCCccccCCCCceeeEeeecccccccCCcccCCC-CCCchhHHHHHHHHHHHHHhCCCCccccCCCCccccHHHHHHH
Q 011360 354 SDLGLAMAIPDGYTRVLISYVLGTMAYIAPEYFQQP-ELSEKCDIFSFGMLLISLVRGVPSFVFHQNGEEICSPEWLRKV 432 (487)
Q Consensus 354 ~DFg~s~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~-~~~~~~DvwslG~~l~elltg~~pf~~~~~~~~~~~~~~~~~~ 432 (487)
+|||++......... .....+++.|+|||.+.+. .++.++||||||+++|+|+||..||...... ....+.
T Consensus 142 ~dfg~~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~------~~~~~~ 213 (284)
T cd07860 142 ADFGLARAFGVPVRT--YTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI------DQLFRI 213 (284)
T ss_pred eeccchhhcccCccc--cccccccccccCCeEEecCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHH------HHHHHH
Confidence 999998765433211 1233468899999988664 4688999999999999999999999543211 111111
Q ss_pred Hh-cCCCCCccCC----------CCC---C----CCcHHHHHHHHHHHhhccCCCCCCCCChHHHHH
Q 011360 433 MN-SKNPSRAIDP----------RLP---G----NGYEKKMLHVLKIAYICTLHDPEERPNSQYVRC 481 (487)
Q Consensus 433 ~~-~~~~~~~~~~----------~~~---~----~~~~~~~~~l~~li~~cl~~~P~~RPs~~~il~ 481 (487)
.. .+.+...+.+ ..+ . .........+.+++.+||+.||++|||+++++.
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~ 280 (284)
T cd07860 214 FRTLGTPDEVVWPGVTSLPDYKPSFPKWARQDFSKVVPPLDEDGRDLLSQMLHYDPNKRISAKAALA 280 (284)
T ss_pred HHHhCCCChhhhhhhhHHHHHHhhcccccccCHHHHcccCCHHHHHHHHHhcCCCcccCCCHHHHhc
Confidence 11 0000000000 000 0 001112345788999999999999999999874
No 302
>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning
Probab=100.00 E-value=2.4e-36 Score=292.13 Aligned_cols=261 Identities=24% Similarity=0.320 Sum_probs=197.7
Q ss_pred ccccccccccccceeEEEEEecCCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCCCCccccce
Q 011360 193 CFASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQIRHRNILPLLA 272 (487)
Q Consensus 193 ~~~~~~~lg~G~~g~v~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~ 272 (487)
+|.+.+.||.|+||.||+|.. ..+++.||+|++.. ..........+.+|+.+++.++||||+++++
T Consensus 2 ~y~~~~~i~~g~~~~v~~~~~-~~~~~~v~vK~~~~-------------~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~ 67 (288)
T cd07833 2 KYEVLGVVGEGAYGVVLKCRN-KATGEIVAIKKFKE-------------SEDDEDVKKTALREVKVLRQLRHENIVNLKE 67 (288)
T ss_pred ceeEEEEecccCCeeEEEEEe-CCCCcEEEEehhhh-------------hcccccchhHHHHHHHHHHhcCCCCeeehhh
Confidence 588999999999999999975 45688999997732 1112334567889999999999999999999
Q ss_pred EEecCCeeEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCCEE
Q 011360 273 HMVRPDCHLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVLLNDDMEAC 352 (487)
Q Consensus 273 ~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nill~~~~~~k 352 (487)
++..++..+++|||++++.+..+... ...+++..+..++.|++.||.|| |+.|++|+||+|+||++++++.+|
T Consensus 68 ~~~~~~~~~iv~e~~~~~~l~~~~~~----~~~~~~~~~~~~~~~i~~~l~~L---H~~~i~H~dl~~~ni~~~~~~~~k 140 (288)
T cd07833 68 AFRRKGRLYLVFEYVERTLLELLEAS----PGGLPPDAVRSYIWQLLQAIAYC---HSHNIIHRDIKPENILVSESGVLK 140 (288)
T ss_pred eEEECCEEEEEEecCCCCHHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHH---HHCCeecCCCCHHHeEECCCCCEE
Confidence 99999999999999988766655532 45588999999999999999999 677899999999999999999999
Q ss_pred EeccCCccccCCCCceeeEeeecccccccCCcccCCC-CCCchhHHHHHHHHHHHHHhCCCCccccCCCCccccHHHHHH
Q 011360 353 ISDLGLAMAIPDGYTRVLISYVLGTMAYIAPEYFQQP-ELSEKCDIFSFGMLLISLVRGVPSFVFHQNGEEICSPEWLRK 431 (487)
Q Consensus 353 l~DFg~s~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~-~~~~~~DvwslG~~l~elltg~~pf~~~~~~~~~~~~~~~~~ 431 (487)
|+|||++......... ......++..|+|||++.+. .++.++||||||+++|+|++|.+||...... +....
T Consensus 141 l~d~g~~~~~~~~~~~-~~~~~~~~~~~~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~------~~~~~ 213 (288)
T cd07833 141 LCDFGFARALRARPAS-PLTDYVATRWYRAPELLVGDTNYGKPVDVWAIGCIMAELLDGEPLFPGDSDI------DQLYL 213 (288)
T ss_pred EEeeecccccCCCccc-cccCcccccCCcCCchhcCCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCHH------HHHHH
Confidence 9999998876544321 11335678899999999887 8899999999999999999999999543211 11110
Q ss_pred HHh--cC-------------CCC--CccCCCCCC----CCcHHHHHHHHHHHhhccCCCCCCCCChHHHHH
Q 011360 432 VMN--SK-------------NPS--RAIDPRLPG----NGYEKKMLHVLKIAYICTLHDPEERPNSQYVRC 481 (487)
Q Consensus 432 ~~~--~~-------------~~~--~~~~~~~~~----~~~~~~~~~l~~li~~cl~~~P~~RPs~~~il~ 481 (487)
... .. ... ...+...+. ......+.++.+++.+||..+|++|||+++++.
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~ 284 (288)
T cd07833 214 IQKCLGPLPPSHQELFSSNPRFAGVAFPEPSQPESLERRYPGKVSSPALDFLKACLRMDPKERLTCDELLQ 284 (288)
T ss_pred HHHHhCCCCHHHhhhcccCccccccccCCCCCcHHHHHhcCCccchHHHHHHHHHhccCchhcccHHHHhc
Confidence 000 00 000 000000000 001112567899999999999999999999875
No 303
>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an
Probab=100.00 E-value=6.1e-36 Score=284.00 Aligned_cols=252 Identities=25% Similarity=0.361 Sum_probs=203.6
Q ss_pred ccccccccccccceeEEEEEecCCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCCCCccccce
Q 011360 193 CFASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQIRHRNILPLLA 272 (487)
Q Consensus 193 ~~~~~~~lg~G~~g~v~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~ 272 (487)
+|.+.+.||.|++|.||++.. ..++..+++|.+... .........+.+|+.+++.++||||+++++
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~-~~~~~~~~ik~~~~~-------------~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~ 66 (256)
T cd08530 1 DFKVLKKLGKGSYGSVYKVKR-LSDNQFYALKEVDLG-------------SMSQKEREDAVNEIRILASVNHPNIISYKE 66 (256)
T ss_pred CceEeeeecCCCceeEEEEEE-CCCCCEEEEEEEehh-------------hccHHHHHHHHHHHHHHHhCCCCCchhhhh
Confidence 378889999999999999975 457889999987321 112233456678999999999999999999
Q ss_pred EEecCCeeEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCCEE
Q 011360 273 HMVRPDCHLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVLLNDDMEAC 352 (487)
Q Consensus 273 ~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nill~~~~~~k 352 (487)
++......++||||+++++|.+++.........+++..+..++.|++.||.|| |+.|++|+||+|.||+++.++.+|
T Consensus 67 ~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~l---h~~~i~h~~l~~~ni~~~~~~~~k 143 (256)
T cd08530 67 AFLDGNKLCIVMEYAPFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQAL---HEQKILHRDLKSANILLVANDLVK 143 (256)
T ss_pred hhccCCEEEEEehhcCCCCHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHH---hhCCcccCCCCcceEEEecCCcEE
Confidence 99999999999999999999999876544456789999999999999999999 788999999999999999999999
Q ss_pred EeccCCccccCCCCceeeEeeecccccccCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCccccCCCCccccHHHHHHH
Q 011360 353 ISDLGLAMAIPDGYTRVLISYVLGTMAYIAPEYFQQPELSEKCDIFSFGMLLISLVRGVPSFVFHQNGEEICSPEWLRKV 432 (487)
Q Consensus 353 l~DFg~s~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DvwslG~~l~elltg~~pf~~~~~~~~~~~~~~~~~~ 432 (487)
|+|||++........ ....+++.|+|||.+.+..++.++|+||||+++|+|++|..||...+. .+.....
T Consensus 144 l~d~g~~~~~~~~~~----~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~------~~~~~~~ 213 (256)
T cd08530 144 IGDLGISKVLKKNMA----KTQIGTPHYMAPEVWKGRPYSYKSDIWSLGCLLYEMATFAPPFEARSM------QDLRYKV 213 (256)
T ss_pred EeeccchhhhccCCc----ccccCCccccCHHHHCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH------HHHHHHH
Confidence 999999987655421 234578899999999988899999999999999999999999943321 1222222
Q ss_pred HhcCCCCCccCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCChHHHHH
Q 011360 433 MNSKNPSRAIDPRLPGNGYEKKMLHVLKIAYICTLHDPEERPNSQYVRC 481 (487)
Q Consensus 433 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~~il~ 481 (487)
. ...... ++ .....++.+++.+||+.+|++|||+.++++
T Consensus 214 ~-~~~~~~-----~~----~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~ 252 (256)
T cd08530 214 Q-RGKYPP-----IP----PIYSQDLQNFIRSMLQVKPKLRPNCDKILA 252 (256)
T ss_pred h-cCCCCC-----Cc----hhhCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence 2 111111 11 134466999999999999999999999875
No 304
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=100.00 E-value=2.7e-36 Score=338.49 Aligned_cols=259 Identities=26% Similarity=0.451 Sum_probs=203.1
Q ss_pred ccccccccccccceeEEEEEecCCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCCCCccccce
Q 011360 193 CFASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQIRHRNILPLLA 272 (487)
Q Consensus 193 ~~~~~~~lg~G~~g~v~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~ 272 (487)
.+.....||+|+||.||+|.. ..++..||+|++.... .....|+..+++++|||||++++
T Consensus 691 ~~~~~~~ig~G~~g~Vy~~~~-~~~~~~vavK~~~~~~-------------------~~~~~~~~~l~~l~HpnIv~~~~ 750 (968)
T PLN00113 691 SLKEENVISRGKKGASYKGKS-IKNGMQFVVKEINDVN-------------------SIPSSEIADMGKLQHPNIVKLIG 750 (968)
T ss_pred hCCcccEEccCCCeeEEEEEE-CCCCcEEEEEEccCCc-------------------cccHHHHHHHhhCCCCCcceEEE
Confidence 456667899999999999975 3578999999873210 01123577888999999999999
Q ss_pred EEecCCeeEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCCEE
Q 011360 273 HMVRPDCHLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVLLNDDMEAC 352 (487)
Q Consensus 273 ~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nill~~~~~~k 352 (487)
++.+.+..|+||||+++|+|.+++. .++|..+..++.|++.||+|||..++.+|+||||||+||+++.++..+
T Consensus 751 ~~~~~~~~~lv~Ey~~~g~L~~~l~-------~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlkp~Nil~~~~~~~~ 823 (968)
T PLN00113 751 LCRSEKGAYLIHEYIEGKNLSEVLR-------NLSWERRRKIAIGIAKALRFLHCRCSPAVVVGNLSPEKIIIDGKDEPH 823 (968)
T ss_pred EEEcCCCCEEEEeCCCCCcHHHHHh-------cCCHHHHHHHHHHHHHHHHHhccCCCCCeecCCCCHHhEEECCCCceE
Confidence 9999999999999999999999985 278999999999999999999765588999999999999999998888
Q ss_pred EeccCCccccCCCCceeeEeeecccccccCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCccccCCCCccccHHHHHHH
Q 011360 353 ISDLGLAMAIPDGYTRVLISYVLGTMAYIAPEYFQQPELSEKCDIFSFGMLLISLVRGVPSFVFHQNGEEICSPEWLRKV 432 (487)
Q Consensus 353 l~DFg~s~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DvwslG~~l~elltg~~pf~~~~~~~~~~~~~~~~~~ 432 (487)
+. ||........ ....+|+.|+|||++.+..++.++|||||||++|||+||+.||..... ......+|....
T Consensus 824 ~~-~~~~~~~~~~------~~~~~t~~y~aPE~~~~~~~~~~sDv~S~Gvvl~el~tg~~p~~~~~~-~~~~~~~~~~~~ 895 (968)
T PLN00113 824 LR-LSLPGLLCTD------TKCFISSAYVAPETRETKDITEKSDIYGFGLILIELLTGKSPADAEFG-VHGSIVEWARYC 895 (968)
T ss_pred EE-eccccccccC------CCccccccccCcccccCCCCCcccchhhHHHHHHHHHhCCCCCCcccC-CCCcHHHHHHHh
Confidence 75 6654332211 123578999999999999999999999999999999999999943222 222344555444
Q ss_pred HhcCCCCCccCCCCCCC--CcHHHHHHHHHHHhhccCCCCCCCCChHHHHHHHhhh
Q 011360 433 MNSKNPSRAIDPRLPGN--GYEKKMLHVLKIAYICTLHDPEERPNSQYVRCRLSQL 486 (487)
Q Consensus 433 ~~~~~~~~~~~~~~~~~--~~~~~~~~l~~li~~cl~~~P~~RPs~~~il~~L~~l 486 (487)
.........+++.+... ...+...++.+++.+||+.+|++|||+.++++.|+++
T Consensus 896 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~evl~~L~~~ 951 (968)
T PLN00113 896 YSDCHLDMWIDPSIRGDVSVNQNEIVEVMNLALHCTATDPTARPCANDVLKTLESA 951 (968)
T ss_pred cCccchhheeCccccCCCCccHHHHHHHHHHHHhhCcCCchhCcCHHHHHHHHHHh
Confidence 33333344445544332 3345667889999999999999999999999999876
No 305
>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the
Probab=100.00 E-value=3.7e-36 Score=294.91 Aligned_cols=272 Identities=22% Similarity=0.301 Sum_probs=196.4
Q ss_pred cccccccccccceeEEEEEecCC-CCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCCCCccccce
Q 011360 194 FASLEKIGSGGCGEVYKAELPGS-NGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQIRHRNILPLLA 272 (487)
Q Consensus 194 ~~~~~~lg~G~~g~v~~~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~ 272 (487)
|.+.+.||.|+||.||+|..... ++..||+|.+..... ........+.+|+.++..++||||+++++
T Consensus 2 y~~~~~ig~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~------------~~~~~~~~~~~e~~~l~~l~h~~i~~~~~ 69 (316)
T cd07842 2 YEIEGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKE------------QYTGISQSACREIALLRELKHENVVSLVE 69 (316)
T ss_pred ceEEEEeccCCcEEEEEEEecCCCCCCeEEEEEeccccc------------cccCccHHHHHHHHHHHhcCCCCccceEE
Confidence 77889999999999999976432 688999998843110 11222345678999999999999999999
Q ss_pred EEecC--CeeEEEEEecCCCCHHHHHhhhhcCC-CCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCC--
Q 011360 273 HMVRP--DCHLLVYEFMKNGSLQDILDDVSRGR-RELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVLLND-- 347 (487)
Q Consensus 273 ~~~~~--~~~~lv~E~~~~gsL~~~l~~~~~~~-~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nill~~-- 347 (487)
++... ..+++||||+++ +|.+++....... ..+++..++.++.|++.||.|| |+.|++||||||+||+++.
T Consensus 70 ~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~l---H~~~i~h~dlkp~Nil~~~~~ 145 (316)
T cd07842 70 VFLEHADKSVYLLFDYAEH-DLWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVHYL---HSNWVLHRDLKPANILVMGEG 145 (316)
T ss_pred EEeCCCCceEEEEEeCCCc-CHHHHHHhhccCCCcCcCHHHHHHHHHHHHHHHHHH---HhCCEeeCCCCHHHEEEcCCC
Confidence 99988 889999999964 7777776443332 3789999999999999999999 7788999999999999999
Q ss_pred --CCCEEEeccCCccccCCCCc-eeeEeeecccccccCCcccCCC-CCCchhHHHHHHHHHHHHHhCCCCccccCCCCcc
Q 011360 348 --DMEACISDLGLAMAIPDGYT-RVLISYVLGTMAYIAPEYFQQP-ELSEKCDIFSFGMLLISLVRGVPSFVFHQNGEEI 423 (487)
Q Consensus 348 --~~~~kl~DFg~s~~~~~~~~-~~~~~~~~gt~~y~aPE~l~~~-~~~~~~DvwslG~~l~elltg~~pf~~~~~~~~~ 423 (487)
++.+||+|||++........ ........+++.|+|||.+.+. .++.++||||||+++|+|++|.+||.........
T Consensus 146 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~ 225 (316)
T cd07842 146 PERGVVKIGDLGLARLFNAPLKPLADLDPVVVTIWYRAPELLLGARHYTKAIDIWAIGCIFAELLTLEPIFKGREAKIKK 225 (316)
T ss_pred CccceEEECCCccccccCCCcccccccCCccccccccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhcCCCCcCCcccccc
Confidence 89999999999886644322 1111234578899999987664 5789999999999999999999999655432211
Q ss_pred ccH---HHHHHHHh---cC------------CCCC----ccCCCCCCCCc-H------HHHHHHHHHHhhccCCCCCCCC
Q 011360 424 CSP---EWLRKVMN---SK------------NPSR----AIDPRLPGNGY-E------KKMLHVLKIAYICTLHDPEERP 474 (487)
Q Consensus 424 ~~~---~~~~~~~~---~~------------~~~~----~~~~~~~~~~~-~------~~~~~l~~li~~cl~~~P~~RP 474 (487)
..+ ..+..++. .. .... ......+.... . ....++.+++.+||+.||++||
T Consensus 226 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp 305 (316)
T cd07842 226 SNPFQRDQLERIFEVLGTPTEKDWPDIKKMPEYDTLMKDFKTKTYPSNSLAKWMEKHKKPDSQGFDLLRKLLEYDPTKRI 305 (316)
T ss_pred cchhHHHHHHHHHHHhCCCchhHHHHHhhcccchhhhhhccCCCCCCccHHHHHHhccCCCHHHHHHHHHHhcCCcccCc
Confidence 100 00000000 00 0000 00000110000 0 2335688999999999999999
Q ss_pred ChHHHHH
Q 011360 475 NSQYVRC 481 (487)
Q Consensus 475 s~~~il~ 481 (487)
|+.+++.
T Consensus 306 s~~eil~ 312 (316)
T cd07842 306 TAEEALE 312 (316)
T ss_pred CHHHHhc
Confidence 9999875
No 306
>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.7e-37 Score=320.94 Aligned_cols=254 Identities=26% Similarity=0.308 Sum_probs=204.6
Q ss_pred cccccccccccccceeEEEEEecCCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCCCCccccc
Q 011360 192 DCFASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQIRHRNILPLL 271 (487)
Q Consensus 192 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~ 271 (487)
++|.++++||+|+||.|.++++. .+++.||.|++.. ..-.+......|..|-.+|..-..+-|+++.
T Consensus 75 ~DfeilKvIGrGaFGEV~lVr~k-~t~~VYAMK~lnK------------~eMlKr~~tA~F~EERDimv~~ns~Wiv~Lh 141 (1317)
T KOG0612|consen 75 EDFEILKVIGRGAFGEVALVRHK-STEKVYAMKILNK------------WEMLKRAETACFREERDIMVFGNSEWIVQLH 141 (1317)
T ss_pred HhhHHHHHhcccccceeEEEEee-ccccchhHHHhhH------------HHHhhchhHHHHHHHhHHHHcCCcHHHHHHH
Confidence 46999999999999999999864 6889999997732 2234455667899999999999999999999
Q ss_pred eEEecCCeeEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCCE
Q 011360 272 AHMVRPDCHLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVLLNDDMEA 351 (487)
Q Consensus 272 ~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nill~~~~~~ 351 (487)
..|.++.++|+||||++||+|..++..+ ..+++..++.++..|+-||.-| |+.|+|||||||+|||++.+|++
T Consensus 142 yAFQD~~~LYlVMdY~pGGDlltLlSk~----~~~pE~~ArFY~aEiVlAldsl---H~mgyVHRDiKPDNvLld~~GHi 214 (1317)
T KOG0612|consen 142 YAFQDERYLYLVMDYMPGGDLLTLLSKF----DRLPEDWARFYTAEIVLALDSL---HSMGYVHRDIKPDNVLLDKSGHI 214 (1317)
T ss_pred HHhcCccceEEEEecccCchHHHHHhhc----CCChHHHHHHHHHHHHHHHHHH---HhccceeccCCcceeEecccCcE
Confidence 9999999999999999999999999863 3799999999999999999999 78889999999999999999999
Q ss_pred EEeccCCccccCCCCceeeEeeecccccccCCcccC----C-CCCCchhHHHHHHHHHHHHHhCCCCccccCCCCccccH
Q 011360 352 CISDLGLAMAIPDGYTRVLISYVLGTMAYIAPEYFQ----Q-PELSEKCDIFSFGMLLISLVRGVPSFVFHQNGEEICSP 426 (487)
Q Consensus 352 kl~DFg~s~~~~~~~~~~~~~~~~gt~~y~aPE~l~----~-~~~~~~~DvwslG~~l~elltg~~pf~~~~~~~~~~~~ 426 (487)
||+|||.+-.+...+. ..+...+|||.|.+||+|. + +.|+..+|+||+||++|||+.|..||-. ....
T Consensus 215 kLADFGsClkm~~dG~-V~s~~aVGTPDYISPEvLqs~~~~~g~yG~ecDwWSlGV~~YEMlyG~TPFYa------dslv 287 (1317)
T KOG0612|consen 215 KLADFGSCLKMDADGT-VRSSVAVGTPDYISPEVLQSQGDGKGEYGRECDWWSLGVFMYEMLYGETPFYA------DSLV 287 (1317)
T ss_pred eeccchhHHhcCCCCc-EEeccccCCCCccCHHHHHhhcCCccccCCccchhhhHHHHHHHHcCCCcchH------HHHH
Confidence 9999999988765443 3346678999999999986 3 5799999999999999999999999922 2223
Q ss_pred HHHHHHHhcCCCCCccCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCC---hHHHH
Q 011360 427 EWLRKVMNSKNPSRAIDPRLPGNGYEKKMLHVLKIAYICTLHDPEERPN---SQYVR 480 (487)
Q Consensus 427 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs---~~~il 480 (487)
+-..+++....- .. +| ....++.+..++|++.+. +|+.|.. +++|.
T Consensus 288 eTY~KIm~hk~~-l~----FP--~~~~VSeeakdLI~~ll~-~~e~RLgrngiedik 336 (1317)
T KOG0612|consen 288 ETYGKIMNHKES-LS----FP--DETDVSEEAKDLIEALLC-DREVRLGRNGIEDIK 336 (1317)
T ss_pred HHHHHHhchhhh-cC----CC--cccccCHHHHHHHHHHhc-ChhhhcccccHHHHH
Confidence 333334333111 11 22 112255678888888776 8888887 77664
No 307
>PHA02882 putative serine/threonine kinase; Provisional
Probab=100.00 E-value=1e-35 Score=288.81 Aligned_cols=268 Identities=15% Similarity=0.161 Sum_probs=187.5
Q ss_pred cccccccccccccceeEEEEEecCCC---CceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCCCCcc
Q 011360 192 DCFASLEKIGSGGCGEVYKAELPGSN---GKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQIRHRNIL 268 (487)
Q Consensus 192 ~~~~~~~~lg~G~~g~v~~~~~~~~~---~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv 268 (487)
+.|.+.+.||+|+||.||+|.+.. + +..+|+|...........+. .............+...+..+.|+||+
T Consensus 12 ~~y~i~~~LG~G~fG~Vy~~~~~~-~~~~~~~~~~k~~~~~~~~~~~e~----~~~~~~~~~~~~~~~~~~~~~~h~~i~ 86 (294)
T PHA02882 12 KEWKIDKLIGCGGFGCVYETQCAS-DHCINNQAVAKIENLENETIVMET----LVYNNIYDIDKIALWKNIHNIDHLGIP 86 (294)
T ss_pred CceEEeeEEecCCCceEEEEEEcC-CcccccceEEEeccccCCchhhHH----HHHHhhhhHHHHHHHHHhccCCCCCCC
Confidence 469999999999999999998642 3 45667775432211111110 011111112233455567788999999
Q ss_pred ccceEEecCC----eeEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEE
Q 011360 269 PLLAHMVRPD----CHLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVL 344 (487)
Q Consensus 269 ~l~~~~~~~~----~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nil 344 (487)
++++++.... ..+++++++ ..++.+.+.. ....++..+..++.|++.||.|| |+++|+||||||+|||
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~----~~~~~~~~~~~i~~qi~~~l~~l---H~~~iiHrDiKp~Nil 158 (294)
T PHA02882 87 KYYGCGSFKRCRMYYRFILLEKL-VENTKEIFKR----IKCKNKKLIKNIMKDMLTTLEYI---HEHGISHGDIKPENIM 158 (294)
T ss_pred cEEEeeeEecCCceEEEEEEehh-ccCHHHHHHh----hccCCHHHHHHHHHHHHHHHHHH---HhCCeecCCCCHHHEE
Confidence 9998766543 336788877 4477776654 23457788899999999999999 7788999999999999
Q ss_pred eCCCCCEEEeccCCccccCCCCce-----eeEeeecccccccCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCccccCC
Q 011360 345 LNDDMEACISDLGLAMAIPDGYTR-----VLISYVLGTMAYIAPEYFQQPELSEKCDIFSFGMLLISLVRGVPSFVFHQN 419 (487)
Q Consensus 345 l~~~~~~kl~DFg~s~~~~~~~~~-----~~~~~~~gt~~y~aPE~l~~~~~~~~~DvwslG~~l~elltg~~pf~~~~~ 419 (487)
++.++.++|+|||+++........ .......||+.|+|||++.+..++.++|||||||++|||++|..||.....
T Consensus 159 l~~~~~~~l~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~ape~~~~~~~~~~~DiwSlG~~l~el~~g~~P~~~~~~ 238 (294)
T PHA02882 159 VDGNNRGYIIDYGIASHFIIHGKHIEYSKEQKDLHRGTLYYAGLDAHNGACVTRRGDLESLGYCMLKWAGIKLPWKGFGH 238 (294)
T ss_pred EcCCCcEEEEEcCCceeeccCCcccccccccccccCCCccccCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCcccc
Confidence 999999999999999866432211 111234699999999999999999999999999999999999999965432
Q ss_pred CCcccc---HHHHHHHHhcCCCCCccCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCChHHHHHHHh
Q 011360 420 GEEICS---PEWLRKVMNSKNPSRAIDPRLPGNGYEKKMLHVLKIAYICTLHDPEERPNSQYVRCRLS 484 (487)
Q Consensus 420 ~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~~il~~L~ 484 (487)
...... .++...... +.. . ++ ..+..+.+++..||..+|++||++.+|++.|+
T Consensus 239 ~~~~~~~~~~~~~~~~~~-~~~--~----~~-----~~~~~~~~~~~~~~~~~~~~rp~~~~l~~~~~ 294 (294)
T PHA02882 239 NGNLIHAAKCDFIKRLHE-GKI--K----IK-----NANKFIYDFIECVTKLSYEEKPDYDALIKIFD 294 (294)
T ss_pred chHHHHHhHHHHHHHhhh-hhh--c----cC-----CCCHHHHHHHHHHHhCCCCCCCCHHHHHHhhC
Confidence 211100 111111111 110 0 11 11356889999999999999999999998763
No 308
>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the
Probab=100.00 E-value=3.6e-36 Score=291.92 Aligned_cols=258 Identities=24% Similarity=0.333 Sum_probs=195.4
Q ss_pred cccccccccccccceeEEEEEecCCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCCCCccccc
Q 011360 192 DCFASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQIRHRNILPLL 271 (487)
Q Consensus 192 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~ 271 (487)
+.|.+.+.||.|+||.||+|.. ..+++.+|+|.+.... ........+.+|+.++.+++||||++++
T Consensus 5 ~~y~~~~~lg~g~~~~v~~~~~-~~~~~~~~ik~~~~~~-------------~~~~~~~~~~~e~~~l~~l~h~ni~~~~ 70 (293)
T cd07843 5 DEYEKLNRIEEGTYGVVYRARD-KKTGEIVALKKLKMEK-------------EKEGFPITSLREINILLKLQHPNIVTVK 70 (293)
T ss_pred hhhhhhhhhcCCCCeEEEEEEE-CCCCcEEEEEEEeecc-------------ccccchhhHHHHHHHHHhcCCCCEEEEE
Confidence 3589999999999999999975 4578899999884311 1122334567899999999999999999
Q ss_pred eEEecC--CeeEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCC
Q 011360 272 AHMVRP--DCHLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVLLNDDM 349 (487)
Q Consensus 272 ~~~~~~--~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nill~~~~ 349 (487)
+++... +..|+||||++ ++|.+++... ...+++..+..++.|++.||.|| |+.|++|+||+|+||+++.++
T Consensus 71 ~~~~~~~~~~~~lv~e~~~-~~L~~~~~~~---~~~l~~~~~~~i~~qi~~aL~~L---H~~~i~H~dl~p~nili~~~~ 143 (293)
T cd07843 71 EVVVGSNLDKIYMVMEYVE-HDLKSLMETM---KQPFLQSEVKCLMLQLLSGVAHL---HDNWILHRDLKTSNLLLNNRG 143 (293)
T ss_pred EEEEecCCCcEEEEehhcC-cCHHHHHHhc---cCCCCHHHHHHHHHHHHHHHHHH---HHCCeeeccCCHHHEEECCCC
Confidence 998877 88999999996 5999888642 34689999999999999999999 677899999999999999999
Q ss_pred CEEEeccCCccccCCCCceeeEeeecccccccCCcccCCC-CCCchhHHHHHHHHHHHHHhCCCCccccCCCCccccHHH
Q 011360 350 EACISDLGLAMAIPDGYTRVLISYVLGTMAYIAPEYFQQP-ELSEKCDIFSFGMLLISLVRGVPSFVFHQNGEEICSPEW 428 (487)
Q Consensus 350 ~~kl~DFg~s~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~-~~~~~~DvwslG~~l~elltg~~pf~~~~~~~~~~~~~~ 428 (487)
.++|+|||++......... .....+++.|+|||.+.+. .++.++|+||||+++|+|++|.+||...... ..
T Consensus 144 ~~~l~d~g~~~~~~~~~~~--~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~f~~~~~~------~~ 215 (293)
T cd07843 144 ILKICDFGLAREYGSPLKP--YTQLVVTLWYRAPELLLGAKEYSTAIDMWSVGCIFAELLTKKPLFPGKSEI------DQ 215 (293)
T ss_pred cEEEeecCceeeccCCccc--cccccccccccCchhhcCCccccchhhHHHHHHHHHHHHhCCCCCCCCChH------HH
Confidence 9999999998876543211 1234578899999988754 4689999999999999999999999543221 11
Q ss_pred HHHHHhc--------------------CC----CCCccCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCChHHHHH
Q 011360 429 LRKVMNS--------------------KN----PSRAIDPRLPGNGYEKKMLHVLKIAYICTLHDPEERPNSQYVRC 481 (487)
Q Consensus 429 ~~~~~~~--------------------~~----~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~~il~ 481 (487)
....... .. ....+...++.. .....+.+++.+||+.+|++|||+.+++.
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~li~~~l~~~p~~R~t~~ell~ 289 (293)
T cd07843 216 LNKIFKLLGTPTEKIWPGFSELPGAKKKTFTKYPYNQLRKKFPAL---SLSDNGFDLLNRLLTYDPAKRISAEDALK 289 (293)
T ss_pred HHHHHHHhCCCchHHHHHhhccchhcccccccccchhhhcccccc---CCChHHHHHHHHHhccCccccCCHHHHhc
Confidence 1111000 00 000001111110 02456889999999999999999999875
No 309
>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi
Probab=100.00 E-value=1.2e-35 Score=283.37 Aligned_cols=246 Identities=24% Similarity=0.318 Sum_probs=195.8
Q ss_pred cccccceeEEEEEecCCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCCCCccccceEEecCCe
Q 011360 200 IGSGGCGEVYKAELPGSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQIRHRNILPLLAHMVRPDC 279 (487)
Q Consensus 200 lg~G~~g~v~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~ 279 (487)
||.|++|.||++... .++..+|+|.+.... .........+.+|+.+++.++||||+++++.+.++..
T Consensus 1 lg~g~~~~v~~~~~~-~~~~~~~iK~~~~~~------------~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~ 67 (262)
T cd05572 1 LGVGGFGRVELVKVK-SKNRTFALKCVKKRH------------IVETGQQEHIFSEKEILEECNHPFIVKLYRTFKDKKY 67 (262)
T ss_pred CCCCCceEEEEEEEC-CCCcEEEEEEEehhc------------chhhhHHHHHHHHHHHHHhCCCCCEeeeeeeEEcCCc
Confidence 699999999999754 468899999874211 1112234578889999999999999999999999999
Q ss_pred eEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCCEEEeccCCc
Q 011360 280 HLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVLLNDDMEACISDLGLA 359 (487)
Q Consensus 280 ~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nill~~~~~~kl~DFg~s 359 (487)
.|++|||+++++|.+++.. ...++...+..++.|++.||.|| |++|++|+||+|+||+++.++.++|+|||++
T Consensus 68 ~~lv~e~~~~~~L~~~l~~----~~~l~~~~~~~~~~~i~~~l~~l---H~~~~~h~dl~~~nilv~~~~~~~l~df~~~ 140 (262)
T cd05572 68 IYMLMEYCLGGELWTILRD----RGLFDEYTARFYIACVVLAFEYL---HNRGIIYRDLKPENLLLDSNGYVKLVDFGFA 140 (262)
T ss_pred cEEEEecCCCCcHHHHHhh----cCCCCHHHHHHHHHHHHHHHHHH---hhCCcccCCCCHHHEEEcCCCCEEEeeCCcc
Confidence 9999999999999999965 34588999999999999999999 7788999999999999999999999999999
Q ss_pred cccCCCCceeeEeeecccccccCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCccccCCCCccccHHHHHHHHhcCCCC
Q 011360 360 MAIPDGYTRVLISYVLGTMAYIAPEYFQQPELSEKCDIFSFGMLLISLVRGVPSFVFHQNGEEICSPEWLRKVMNSKNPS 439 (487)
Q Consensus 360 ~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DvwslG~~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 439 (487)
........ .....+++.|+|||.+.+..++.++|+||||+++|+|++|..||..... ...............
T Consensus 141 ~~~~~~~~---~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~----~~~~~~~~~~~~~~~- 212 (262)
T cd05572 141 KKLKSGQK---TWTFCGTPEYVAPEIILNKGYDFSVDYWSLGILLYELLTGRPPFGEDDE----DPMEIYNDILKGNGK- 212 (262)
T ss_pred cccCcccc---cccccCCcCccChhHhcCCCCCChhhhhhhHHHHHHHHhCCCCcCCCCC----CHHHHHHHHhccCCC-
Confidence 87654321 1234578999999999888899999999999999999999999955432 122333333321111
Q ss_pred CccCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCC-----hHHHHH
Q 011360 440 RAIDPRLPGNGYEKKMLHVLKIAYICTLHDPEERPN-----SQYVRC 481 (487)
Q Consensus 440 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs-----~~~il~ 481 (487)
...+... ...+.+++.+||+.+|++||| ++++++
T Consensus 213 ~~~~~~~--------~~~~~~~i~~~l~~~p~~R~~~~~~~~~~l~~ 251 (262)
T cd05572 213 LEFPNYI--------DKAAKDLIKQLLRRNPEERLGNLKGGIKDIKK 251 (262)
T ss_pred CCCCccc--------CHHHHHHHHHHccCChhhCcCCcccCHHHHhc
Confidence 1111111 356899999999999999999 777765
No 310
>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou
Probab=100.00 E-value=7.6e-36 Score=288.57 Aligned_cols=252 Identities=31% Similarity=0.485 Sum_probs=200.2
Q ss_pred ccccccccccccccceeEEEEEecCCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCCCCcccc
Q 011360 191 EDCFASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQIRHRNILPL 270 (487)
Q Consensus 191 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l 270 (487)
.+.|...+.+|.|++|.||+|.+. .++..+++|.+... .. ....+..|+..++.++||||+++
T Consensus 18 ~~~~~~~~~l~~g~~~~v~~~~~~-~~~~~~~iK~~~~~---------------~~-~~~~~~~e~~~l~~l~~~~i~~~ 80 (286)
T cd06614 18 RELYKNLEKIGEGASGEVYKATDR-ATGKEVAIKKMRLR---------------KQ-NKELIINEILIMKDCKHPNIVDY 80 (286)
T ss_pred cccchHhHhccCCCCeEEEEEEEc-cCCcEEEEEEEecC---------------ch-hHHHHHHHHHHHHHCCCCCeeEE
Confidence 346888899999999999999764 46889999988431 11 34567889999999999999999
Q ss_pred ceEEecCCeeEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCC
Q 011360 271 LAHMVRPDCHLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVLLNDDME 350 (487)
Q Consensus 271 ~~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nill~~~~~ 350 (487)
++.+...+..|+++||+++++|.+++... ...+++..+..++.|++.||.|| |+.|++|+||+|+||+++.++.
T Consensus 81 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~---~~~l~~~~~~~i~~~i~~~L~~l---H~~gi~H~dl~p~ni~i~~~~~ 154 (286)
T cd06614 81 YDSYLVGDELWVVMEYMDGGSLTDIITQN---FVRMNEPQIAYVCREVLQGLEYL---HSQNVIHRDIKSDNILLSKDGS 154 (286)
T ss_pred EEEEEECCEEEEEEeccCCCcHHHHHHHh---ccCCCHHHHHHHHHHHHHHHHHH---HhCCeeeCCCChhhEEEcCCCC
Confidence 99999999999999999999999999752 13789999999999999999999 7789999999999999999999
Q ss_pred EEEeccCCccccCCCCceeeEeeecccccccCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCccccCCCCccccHHHHH
Q 011360 351 ACISDLGLAMAIPDGYTRVLISYVLGTMAYIAPEYFQQPELSEKCDIFSFGMLLISLVRGVPSFVFHQNGEEICSPEWLR 430 (487)
Q Consensus 351 ~kl~DFg~s~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DvwslG~~l~elltg~~pf~~~~~~~~~~~~~~~~ 430 (487)
++|+|||++......... .....+++.|+|||.+.+..++.++|+||||+++|+|++|..||..... .....
T Consensus 155 ~~l~d~~~~~~~~~~~~~--~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slGvil~~l~~g~~p~~~~~~------~~~~~ 226 (286)
T cd06614 155 VKLADFGFAAQLTKEKSK--RNSVVGTPYWMAPEVIKRKDYGPKVDIWSLGIMCIEMAEGEPPYLREPP------LRALF 226 (286)
T ss_pred EEECccchhhhhccchhh--hccccCCcccCCHhHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCH------HHHHH
Confidence 999999988655433211 1233478899999999888899999999999999999999999943221 11122
Q ss_pred HHHhcCCCCCccCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCChHHHHH
Q 011360 431 KVMNSKNPSRAIDPRLPGNGYEKKMLHVLKIAYICTLHDPEERPNSQYVRC 481 (487)
Q Consensus 431 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~~il~ 481 (487)
.......+ ...+ .......+.+++.+||+.+|.+|||+.+|+.
T Consensus 227 ~~~~~~~~-~~~~-------~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~ 269 (286)
T cd06614 227 LITTKGIP-PLKN-------PEKWSPEFKDFLNKCLVKDPEKRPSAEELLQ 269 (286)
T ss_pred HHHhcCCC-CCcc-------hhhCCHHHHHHHHHHhccChhhCcCHHHHhh
Confidence 22111111 1101 1113356889999999999999999999975
No 311
>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They
Probab=100.00 E-value=1.4e-35 Score=281.50 Aligned_cols=254 Identities=23% Similarity=0.369 Sum_probs=204.6
Q ss_pred ccccccccccccceeEEEEEecCCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCCCCccccce
Q 011360 193 CFASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQIRHRNILPLLA 272 (487)
Q Consensus 193 ~~~~~~~lg~G~~g~v~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~ 272 (487)
+|.+.+.||.|++|.||++... .++..+++|++... .........+..|+.+++.++|||++++++
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~-~~~~~~~ik~~~~~-------------~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~ 66 (258)
T cd08215 1 KYEIIKQIGKGSFGKVYLVRRK-SDGKLYVLKEIDLS-------------NMSEKEREDALNEVKILKKLNHPNIIKYYE 66 (258)
T ss_pred CceEEeeeccCCCeEEEEEEEc-CCCcEEEEEEeecc-------------cCChHHHHHHHHHHHHHHhcCCCChhheEE
Confidence 3788899999999999999754 47889999988431 112234556788999999999999999999
Q ss_pred EEecCCeeEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCCEE
Q 011360 273 HMVRPDCHLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVLLNDDMEAC 352 (487)
Q Consensus 273 ~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nill~~~~~~k 352 (487)
.+...+..++||||+++++|.+++......+..+++..+..++.+++.||.|| |+.|++|+||+|+||+++.++.++
T Consensus 67 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~l---h~~~~~H~dl~~~nil~~~~~~~~ 143 (258)
T cd08215 67 SFEEKGKLCIVMEYADGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYL---HSRKILHRDIKPQNIFLTSNGLVK 143 (258)
T ss_pred EEecCCEEEEEEEecCCCcHHHHHHHhhccCCCcCHHHHHHHHHHHHHHHHHH---HhCCEecccCChHHeEEcCCCcEE
Confidence 99999999999999999999999976433357899999999999999999999 677999999999999999999999
Q ss_pred EeccCCccccCCCCceeeEeeecccccccCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCccccCCCCccccHHHHHHH
Q 011360 353 ISDLGLAMAIPDGYTRVLISYVLGTMAYIAPEYFQQPELSEKCDIFSFGMLLISLVRGVPSFVFHQNGEEICSPEWLRKV 432 (487)
Q Consensus 353 l~DFg~s~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DvwslG~~l~elltg~~pf~~~~~~~~~~~~~~~~~~ 432 (487)
|+|||.+....... .......|++.|+|||.+.+..++.++|+||+|+++|+|++|..||.... ........
T Consensus 144 l~d~~~~~~~~~~~--~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~------~~~~~~~~ 215 (258)
T cd08215 144 LGDFGISKVLSSTV--DLAKTVVGTPYYLSPELCQNKPYNYKSDIWSLGCVLYELCTLKHPFEGEN------LLELALKI 215 (258)
T ss_pred ECCccceeecccCc--ceecceeeeecccChhHhccCCCCccccHHHHHHHHHHHHcCCCCCCCCc------HHHHHHHH
Confidence 99999987764443 12234568899999999988889999999999999999999999994332 22223333
Q ss_pred HhcCCCCCccCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCChHHHHH
Q 011360 433 MNSKNPSRAIDPRLPGNGYEKKMLHVLKIAYICTLHDPEERPNSQYVRC 481 (487)
Q Consensus 433 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~~il~ 481 (487)
.... .. . ++. .....+.+++.+||..+|++|||+.++++
T Consensus 216 ~~~~-~~-~----~~~----~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~ 254 (258)
T cd08215 216 LKGQ-YP-P----IPS----QYSSELRNLVSSLLQKDPEERPSIAQILQ 254 (258)
T ss_pred hcCC-CC-C----CCC----CCCHHHHHHHHHHcCCChhhCcCHHHHhc
Confidence 2221 11 1 111 12356889999999999999999999875
No 312
>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do
Probab=100.00 E-value=1.1e-35 Score=283.33 Aligned_cols=247 Identities=22% Similarity=0.291 Sum_probs=186.4
Q ss_pred cccccccceeEEEEEecCCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHH-HhccCCCCCccccceEEec
Q 011360 198 EKIGSGGCGEVYKAELPGSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEII-TASQIRHRNILPLLAHMVR 276 (487)
Q Consensus 198 ~~lg~G~~g~v~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~-~l~~l~hpnIv~l~~~~~~ 276 (487)
+.||.|+||.||+|.. ..+++.||+|.+.... .........+..|.. ......||||+++++++..
T Consensus 2 ~~l~~g~~~~v~~a~~-~~~~~~vavK~~~~~~------------~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~ 68 (260)
T cd05611 2 KPISKGAFGSVYLAKK-RSTGDYFAIKVLKKSD------------MIAKNQVTNVKAERAIMMIQGESPYVAKLYYSFQS 68 (260)
T ss_pred ccCCcCCCeeEEEEEe-cCCCCeEEEEEecchh------------hhHHHHHHHHHHHHHHHhhcCCCCCeeeeeeeEEc
Confidence 5689999999999975 4578899999873210 011112223334443 3455699999999999999
Q ss_pred CCeeEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCCEEEecc
Q 011360 277 PDCHLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVLLNDDMEACISDL 356 (487)
Q Consensus 277 ~~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nill~~~~~~kl~DF 356 (487)
.+..|+||||+++++|.+++.. ...+++..+..++.|++.||.|| |+.|++||||+|+||+++.++.++|+||
T Consensus 69 ~~~~~lv~e~~~~~~L~~~l~~----~~~~~~~~~~~i~~qi~~aL~~l---H~~~i~H~dl~p~nil~~~~~~~~l~df 141 (260)
T cd05611 69 KDYLYLVMEYLNGGDCASLIKT----LGGLPEDWAKQYIAEVVLGVEDL---HQRGIIHRDIKPENLLIDQTGHLKLTDF 141 (260)
T ss_pred CCeEEEEEeccCCCCHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHH---HHCCeecCCCCHHHeEECCCCcEEEeec
Confidence 9999999999999999999864 35688999999999999999999 7788999999999999999999999999
Q ss_pred CCccccCCCCceeeEeeecccccccCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCccccCCCCccccHHHHHHHHhcC
Q 011360 357 GLAMAIPDGYTRVLISYVLGTMAYIAPEYFQQPELSEKCDIFSFGMLLISLVRGVPSFVFHQNGEEICSPEWLRKVMNSK 436 (487)
Q Consensus 357 g~s~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DvwslG~~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~ 436 (487)
|++...... ....+++.|+|||.+.+..++.++||||||+++|+|++|..||..... ..........
T Consensus 142 g~~~~~~~~------~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~------~~~~~~~~~~- 208 (260)
T cd05611 142 GLSRNGLEN------KKFVGTPDYLAPETILGVGDDKMSDWWSLGCVIFEFLFGYPPFHAETP------DAVFDNILSR- 208 (260)
T ss_pred ccceecccc------ccCCCCcCccChhhhcCCCCcchhhhHHHHHHHHHHHHCCCCCCCCCH------HHHHHHHHhc-
Confidence 998754331 234588899999999888899999999999999999999999943321 1222222211
Q ss_pred CCCCccCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCChHHHHHHH
Q 011360 437 NPSRAIDPRLPGNGYEKKMLHVLKIAYICTLHDPEERPNSQYVRCRL 483 (487)
Q Consensus 437 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~~il~~L 483 (487)
... .+.......+..+.+++.+||+.+|++|||+.++.+.|
T Consensus 209 ~~~------~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~~~l 249 (260)
T cd05611 209 RIN------WPEEVKEFCSPEAVDLINRLLCMDPAKRLGANGYQEIK 249 (260)
T ss_pred ccC------CCCcccccCCHHHHHHHHHHccCCHHHccCCCcHHHHH
Confidence 110 00011112235689999999999999999876554433
No 313
>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase. Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm
Probab=100.00 E-value=6.4e-36 Score=290.33 Aligned_cols=263 Identities=24% Similarity=0.329 Sum_probs=193.4
Q ss_pred ccccccccccccceeEEEEEecCCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccC-CCCCccccc
Q 011360 193 CFASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQI-RHRNILPLL 271 (487)
Q Consensus 193 ~~~~~~~lg~G~~g~v~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpnIv~l~ 271 (487)
+|.+.+.||.|+||.||+|.. ..++..||+|.+.. ..........+.+|+.+++.+ +||||++++
T Consensus 2 ~y~~~~~lg~g~~g~vy~~~~-~~~~~~v~lK~~~~-------------~~~~~~~~~~~~~E~~~l~~l~~~~~i~~~~ 67 (295)
T cd07837 2 AYEKLEKIGEGTYGKVYKARD-KNTGKLVALKKTRL-------------EMDEEGIPPTALREISLLQMLSESIYIVRLL 67 (295)
T ss_pred CceEeeEecccCCeEEEEEEE-CCCCcEEEEEeehh-------------hccccCCchHHHHHHHHHHHccCCCCcccee
Confidence 588999999999999999975 45789999998732 111112234677899999999 569999999
Q ss_pred eEEecCCe-----eEEEEEecCCCCHHHHHhhhhcC-CCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEe
Q 011360 272 AHMVRPDC-----HLLVYEFMKNGSLQDILDDVSRG-RRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVLL 345 (487)
Q Consensus 272 ~~~~~~~~-----~~lv~E~~~~gsL~~~l~~~~~~-~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nill 345 (487)
+++...+. .|+||||+++ +|.+++...... +..+++..++.++.|++.||.|| |++|++||||+|+||++
T Consensus 68 ~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~L---H~~~i~H~dl~~~nil~ 143 (295)
T cd07837 68 DVEHVEEKNGKPSLYLVFEYLDS-DLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAHC---HKHGVMHRDLKPQNLLV 143 (295)
T ss_pred eeEeecCCCCCceEEEEeeccCc-CHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHH---HHCCeeecCCChHHEEE
Confidence 98887665 7999999975 898888653322 45689999999999999999999 77889999999999999
Q ss_pred CC-CCCEEEeccCCccccCCCCceeeEeeecccccccCCcccCC-CCCCchhHHHHHHHHHHHHHhCCCCccccCCCCcc
Q 011360 346 ND-DMEACISDLGLAMAIPDGYTRVLISYVLGTMAYIAPEYFQQ-PELSEKCDIFSFGMLLISLVRGVPSFVFHQNGEEI 423 (487)
Q Consensus 346 ~~-~~~~kl~DFg~s~~~~~~~~~~~~~~~~gt~~y~aPE~l~~-~~~~~~~DvwslG~~l~elltg~~pf~~~~~~~~~ 423 (487)
+. ++.+||+|||++.......... ....+++.|+|||.+.+ ..++.++||||||+++|+|++|..||...+.
T Consensus 144 ~~~~~~~kl~dfg~~~~~~~~~~~~--~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~---- 217 (295)
T cd07837 144 DKQKGLLKIADLGLGRAFSIPVKSY--THEIVTLWYRAPEVLLGSTHYSTPVDIWSVGCIFAEMSRKQPLFPGDSE---- 217 (295)
T ss_pred ecCCCeEEEeecccceecCCCcccc--CCcccccCCCChHHhhCCCCCCchHHHHHHHHHHHHHHcCCCCCCCCCH----
Confidence 98 8899999999987653321111 22346888999998865 4678999999999999999999999954322
Q ss_pred ccHHHHHHHHhc-CCCCC-cc---------------CCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCChHHHHH
Q 011360 424 CSPEWLRKVMNS-KNPSR-AI---------------DPRLPGNGYEKKMLHVLKIAYICTLHDPEERPNSQYVRC 481 (487)
Q Consensus 424 ~~~~~~~~~~~~-~~~~~-~~---------------~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~~il~ 481 (487)
.+....+... ..+.. .. .+.............+.+++.+||..||.+|||+.+++.
T Consensus 218 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~R~~~~eil~ 290 (295)
T cd07837 218 --LQQLLHIFKLLGTPTEQVWPGVSKLRDWHEFPQWKPQDLSRAVPDLSPEGLDLLQKMLRYDPAKRISAKAALT 290 (295)
T ss_pred --HHHHHHHHHHhCCCChhhCcchhhccchhhcCcccchhHHHhccccCHHHHHHHHHHccCChhhcCCHHHHhc
Confidence 1111111110 00000 00 000000011123456889999999999999999999874
No 314
>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess
Probab=100.00 E-value=7.1e-36 Score=289.51 Aligned_cols=261 Identities=23% Similarity=0.303 Sum_probs=191.3
Q ss_pred cccccccccccccceeEEEEEecCCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCCCCccccc
Q 011360 192 DCFASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQIRHRNILPLL 271 (487)
Q Consensus 192 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~ 271 (487)
+.|.+.+.||.|+||.||+|.. ..++..||+|.+.... .......+.+|+.+++.++|+||++++
T Consensus 5 ~~y~~~~~ig~g~~~~v~~~~~-~~~~~~~~iK~~~~~~--------------~~~~~~~~~~e~~~l~~l~h~ni~~~~ 69 (291)
T cd07870 5 TSYLNLEKLGEGSYATVYKGIS-RINGQLVALKVISMKT--------------EEGVPFTAIREASLLKGLKHANIVLLH 69 (291)
T ss_pred ceeEEEEEEEecCCEEEEEEEE-cCCCcEEEEEEecccC--------------cCCCcHHHHHHHHHHHhcCCCCEeEEE
Confidence 5699999999999999999964 4578899999873211 111223456789999999999999999
Q ss_pred eEEecCCeeEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCCE
Q 011360 272 AHMVRPDCHLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVLLNDDMEA 351 (487)
Q Consensus 272 ~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nill~~~~~~ 351 (487)
+++..++..|+||||+. ++|.+++.. ....+++..+..++.|++.||.|| |+.|++|+||||+||+++.++.+
T Consensus 70 ~~~~~~~~~~lv~e~~~-~~l~~~~~~---~~~~~~~~~~~~~~~qi~~~L~~l---H~~~i~H~dlkp~Nil~~~~~~~ 142 (291)
T cd07870 70 DIIHTKETLTFVFEYMH-TDLAQYMIQ---HPGGLHPYNVRLFMFQLLRGLAYI---HGQHILHRDLKPQNLLISYLGEL 142 (291)
T ss_pred EEEecCCeEEEEEeccc-CCHHHHHHh---CCCCCCHHHHHHHHHHHHHHHHHH---HhCCcccCCCChHHEEEcCCCcE
Confidence 99999999999999995 677776643 234577888899999999999999 67789999999999999999999
Q ss_pred EEeccCCccccCCCCceeeEeeecccccccCCcccCCC-CCCchhHHHHHHHHHHHHHhCCCCccccCCCCccccHHHHH
Q 011360 352 CISDLGLAMAIPDGYTRVLISYVLGTMAYIAPEYFQQP-ELSEKCDIFSFGMLLISLVRGVPSFVFHQNGEEICSPEWLR 430 (487)
Q Consensus 352 kl~DFg~s~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~-~~~~~~DvwslG~~l~elltg~~pf~~~~~~~~~~~~~~~~ 430 (487)
+|+|||+++........ .....+++.|+|||.+.+. .++.++||||||+++|+|++|..||...... .+.+.
T Consensus 143 ~l~Dfg~~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~f~~~~~~-----~~~~~ 215 (291)
T cd07870 143 KLADFGLARAKSIPSQT--YSSEVVTLWYRPPDVLLGATDYSSALDIWGAGCIFIEMLQGQPAFPGVSDV-----FEQLE 215 (291)
T ss_pred EEeccccccccCCCCCC--CCCccccccccCCceeecCCCCCcHHHHHHHHHHHHHHHhCCCCCCCchhH-----HHHHH
Confidence 99999998754322111 1233478899999998754 5788999999999999999999999543221 11111
Q ss_pred HHHhc-CCC---------------CCccCCCCCCCC-----cHHHHHHHHHHHhhccCCCCCCCCChHHHHH
Q 011360 431 KVMNS-KNP---------------SRAIDPRLPGNG-----YEKKMLHVLKIAYICTLHDPEERPNSQYVRC 481 (487)
Q Consensus 431 ~~~~~-~~~---------------~~~~~~~~~~~~-----~~~~~~~l~~li~~cl~~~P~~RPs~~~il~ 481 (487)
..+.. +.+ ........+... .......+.+++.+|+..||++|||+.+++.
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~~~l~ 287 (291)
T cd07870 216 KIWTVLGVPTEDTWPGVSKLPNYKPEWFLPCKPQQLRVVWKRLSRPPKAEDLASQMLMMFPKDRISAQDALL 287 (291)
T ss_pred HHHHHcCCCChhhhhhhhhcccccchhccccCCcchhhhccccCCChHHHHHHHHHhCcCcccCcCHHHHhc
Confidence 11110 000 000000000000 0011356789999999999999999999874
No 315
>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein. Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc
Probab=100.00 E-value=1.3e-35 Score=290.97 Aligned_cols=260 Identities=23% Similarity=0.301 Sum_probs=190.6
Q ss_pred ccccccccccceeEEEEEecCCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCCCCccccceEE
Q 011360 195 ASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQIRHRNILPLLAHM 274 (487)
Q Consensus 195 ~~~~~lg~G~~g~v~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~ 274 (487)
.+.+.+|.|+++.++.+. .+++.||+|++... .........+.+|+.+++.++||||+++++++
T Consensus 5 ~i~~~~~~~~~v~~~~~~---~~~~~~avK~~~~~-------------~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~ 68 (314)
T cd08216 5 LIGKCFEDLMIVHLAKHK---PTNTLVAVKKINLD-------------SCSKEDLKLLQQEIITSRQLQHPNILPYVTSF 68 (314)
T ss_pred hhhHhhcCCceEEEEEec---CCCCEEEEEEEecc-------------ccchhHHHHHHHHHHHHHhcCCcchhhhhhee
Confidence 344455555555555553 37899999998431 12334567789999999999999999999999
Q ss_pred ecCCeeEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCCEEEe
Q 011360 275 VRPDCHLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVLLNDDMEACIS 354 (487)
Q Consensus 275 ~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nill~~~~~~kl~ 354 (487)
...+..+++|||+++|+|.+++... ....+++..+..++.|++.||.|| |++||+||||||+||+++.++.+||+
T Consensus 69 ~~~~~~~~~~e~~~~~~l~~~l~~~--~~~~~~~~~~~~~~~~l~~~L~~L---H~~~ivH~dlk~~Nili~~~~~~kl~ 143 (314)
T cd08216 69 IVDSELYVVSPLMAYGSCEDLLKTH--FPEGLPELAIAFILKDVLNALDYI---HSKGFIHRSVKASHILLSGDGKVVLS 143 (314)
T ss_pred ecCCeEEEEEeccCCCCHHHHHHHh--cccCCCHHHHHHHHHHHHHHHHHH---HHCCeecCCCCcceEEEecCCceEEe
Confidence 9999999999999999999999752 234588899999999999999999 67789999999999999999999999
Q ss_pred ccCCccccCCCCce-----eeEeeecccccccCCcccCC--CCCCchhHHHHHHHHHHHHHhCCCCccccCCCCccccHH
Q 011360 355 DLGLAMAIPDGYTR-----VLISYVLGTMAYIAPEYFQQ--PELSEKCDIFSFGMLLISLVRGVPSFVFHQNGEEICSPE 427 (487)
Q Consensus 355 DFg~s~~~~~~~~~-----~~~~~~~gt~~y~aPE~l~~--~~~~~~~DvwslG~~l~elltg~~pf~~~~~~~~~~~~~ 427 (487)
|||.+......... .......++..|+|||++.. ..++.++|+||||+++|+|++|..||...... .
T Consensus 144 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Diws~G~il~el~~g~~pf~~~~~~------~ 217 (314)
T cd08216 144 GLRYSVSMIKHGKRQRVVHDFPKSSVKNLPWLSPEVLQQNLQGYNEKSDIYSVGITACELANGHVPFKDMPAT------Q 217 (314)
T ss_pred cCccceeeccccccccccccccccccccccccCHHHhcCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHH------H
Confidence 99988655322111 11123456788999999876 35889999999999999999999999533211 1
Q ss_pred HHHHHHhcCCCC-----------------------CccCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCChHHHHH
Q 011360 428 WLRKVMNSKNPS-----------------------RAIDPRLPGNGYEKKMLHVLKIAYICTLHDPEERPNSQYVRC 481 (487)
Q Consensus 428 ~~~~~~~~~~~~-----------------------~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~~il~ 481 (487)
.......+..+. .......+.........++.+++.+||..||++|||++++++
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~ 294 (314)
T cd08216 218 MLLEKVRGTVPCLLDKSTYPLYEDSMSQSRSSNEHPNNRDSVDHPYTRTFSEHFHQFVELCLQRDPESRPSASQLLN 294 (314)
T ss_pred HHHHHHhccCccccccCchhhhcCCcCcccccccccchhhhhhcchhhHHHHHHHHHHHHHhhcCCCcCcCHHHHhc
Confidence 111111110000 000000111122234567889999999999999999999875
No 316
>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase. Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.
Probab=100.00 E-value=9.5e-36 Score=287.03 Aligned_cols=262 Identities=24% Similarity=0.287 Sum_probs=190.1
Q ss_pred cccccccccccceeEEEEEecCCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccC-CCCCccccce
Q 011360 194 FASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQI-RHRNILPLLA 272 (487)
Q Consensus 194 ~~~~~~lg~G~~g~v~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpnIv~l~~ 272 (487)
|.+.+.||.|+||.||+|.. ..++..||+|++... ...........|+..+.++ .||||+++++
T Consensus 1 y~~~~~lg~g~~~~v~~~~~-~~~~~~~aik~~~~~--------------~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~ 65 (282)
T cd07831 1 YKILGKIGEGTFSEVLKAQS-RKTGKYYAIKCMKKH--------------FKSLEQVNNLREIQALRRLSPHPNILRLIE 65 (282)
T ss_pred CceEeeccccccceEEEEEE-cCCCcEEEEEEehhc--------------cCCchhhhHHHHHHHHhhcCCCCCccceEE
Confidence 56788999999999999975 457889999987321 0111122345688888888 5999999999
Q ss_pred EEecC--CeeEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCC
Q 011360 273 HMVRP--DCHLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVLLNDDME 350 (487)
Q Consensus 273 ~~~~~--~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nill~~~~~ 350 (487)
++.+. +..++||||++ |+|.+++.. ....+++..+..++.|++.||.|| |+.|++||||+|+||+++. +.
T Consensus 66 ~~~~~~~~~~~lv~e~~~-~~l~~~l~~---~~~~~~~~~~~~~~~qi~~~L~~L---H~~~i~H~dl~p~ni~l~~-~~ 137 (282)
T cd07831 66 VLFDRKTGRLALVFELMD-MNLYELIKG---RKRPLPEKRVKSYMYQLLKSLDHM---HRNGIFHRDIKPENILIKD-DI 137 (282)
T ss_pred EEecCCCCcEEEEEecCC-ccHHHHHHh---ccCCCCHHHHHHHHHHHHHHHHHH---HHCCceecccCHHHEEEcC-CC
Confidence 99987 88999999996 588887753 235689999999999999999999 6778999999999999999 99
Q ss_pred EEEeccCCccccCCCCceeeEeeecccccccCCcccC-CCCCCchhHHHHHHHHHHHHHhCCCCccccCCCCc-------
Q 011360 351 ACISDLGLAMAIPDGYTRVLISYVLGTMAYIAPEYFQ-QPELSEKCDIFSFGMLLISLVRGVPSFVFHQNGEE------- 422 (487)
Q Consensus 351 ~kl~DFg~s~~~~~~~~~~~~~~~~gt~~y~aPE~l~-~~~~~~~~DvwslG~~l~elltg~~pf~~~~~~~~------- 422 (487)
+||+|||++......... ....++..|+|||.+. +..++.++|||||||++|||++|.+||...+....
T Consensus 138 ~kl~dfg~~~~~~~~~~~---~~~~~~~~y~aPE~~~~~~~~~~~~Di~slGv~l~el~~~~~p~~~~~~~~~~~~~~~~ 214 (282)
T cd07831 138 LKLADFGSCRGIYSKPPY---TEYISTRWYRAPECLLTDGYYGPKMDIWAVGCVFFEILSLFPLFPGTNELDQIAKIHDV 214 (282)
T ss_pred eEEEecccccccccCCCc---CCCCCCcccCChhHhhcCCCCCcchhHHHHHHHHHHHHcCCcCCCCCCHHHHHHHHHHH
Confidence 999999999876443221 2245788999999765 45678999999999999999999999954332110
Q ss_pred --cccHHHHHHHHhcCCCCCccCCCCCCC---CcHHHHHHHHHHHhhccCCCCCCCCChHHHHH
Q 011360 423 --ICSPEWLRKVMNSKNPSRAIDPRLPGN---GYEKKMLHVLKIAYICTLHDPEERPNSQYVRC 481 (487)
Q Consensus 423 --~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~l~~li~~cl~~~P~~RPs~~~il~ 481 (487)
.....+..................... .....+..+.+++.+||+++|++|||+++++.
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~ 278 (282)
T cd07831 215 LGTPDAEVLKKFRKSRHMNYNFPSKKGTGLRKLLPNASAEGLDLLKKLLAYDPDERITAKQALR 278 (282)
T ss_pred cCCCCHHHHHhhcccccccccCcccccccHHHHcccccHHHHHHHHHHhccCcccccCHHHHhh
Confidence 001111111100000000000000000 01234678999999999999999999999875
No 317
>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=1.3e-36 Score=299.72 Aligned_cols=250 Identities=25% Similarity=0.368 Sum_probs=205.3
Q ss_pred ccccccccccccccceeEEEEEecCCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCCCCcccc
Q 011360 191 EDCFASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQIRHRNILPL 270 (487)
Q Consensus 191 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l 270 (487)
...|.+.+.||.|.|++|.++++. .++..||||.+.. ..........+.+|+.+|..++|||||++
T Consensus 55 vg~y~i~~tig~g~f~~V~La~~~-~t~~~VaiK~idk-------------t~ln~~~~~k~~rev~imk~l~HPnIvkl 120 (596)
T KOG0586|consen 55 VGLYVIIKTIGKGNFAKVKLARHI-LTGTEVAIKIIDK-------------TQLNPSKRQKLGREVDIMKSLNHPNIVKL 120 (596)
T ss_pred ccceeeeeeeccceeEEEEeeEec-CCCceEEEEEehh-------------cccChHHHHHHHHHHHHHHhcCCcceeee
Confidence 346899999999999999999864 5789999998732 33444555668999999999999999999
Q ss_pred ceEEecCCeeEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCC
Q 011360 271 LAHMVRPDCHLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVLLNDDME 350 (487)
Q Consensus 271 ~~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nill~~~~~ 350 (487)
+.+......+|+||||+.+|.+++++.. ........+..++.|++++++|| |+++|||||||++|||++.+.+
T Consensus 121 ~~v~~t~~~lylV~eya~~ge~~~yl~~----~gr~~e~~ar~~F~q~vsaveYc---H~k~ivHrdLk~eNilL~~~mn 193 (596)
T KOG0586|consen 121 FSVIETEATLYLVMEYASGGELFDYLVK----HGRMKEKEARAKFRQIVSAVEYC---HSKNIVHRDLKAENILLDENMN 193 (596)
T ss_pred eeeeeecceeEEEEEeccCchhHHHHHh----cccchhhhhhhhhHHHHHHHHHH---hhcceeccccchhhcccccccc
Confidence 9999999999999999999999999976 34455588899999999999999 8889999999999999999999
Q ss_pred EEEeccCCccccCCCCceeeEeeecccccccCCcccCCCCC-CchhHHHHHHHHHHHHHhCCCCccccCCCCccccHHHH
Q 011360 351 ACISDLGLAMAIPDGYTRVLISYVLGTMAYIAPEYFQQPEL-SEKCDIFSFGMLLISLVRGVPSFVFHQNGEEICSPEWL 429 (487)
Q Consensus 351 ~kl~DFg~s~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~-~~~~DvwslG~~l~elltg~~pf~~~~~~~~~~~~~~~ 429 (487)
+||+|||++..+..+. .....+|++.|.|||++.+..| ++.+|+||+|+++|.|+.|..||.+..- .+..
T Consensus 194 ikIaDfgfS~~~~~~~---~lqt~cgsppyAaPEl~~g~~y~gpe~D~Wslgvvly~LV~GsLPFDG~~l------k~Lr 264 (596)
T KOG0586|consen 194 IKIADFGFSTFFDYGL---MLQTFCGSPPYAAPELFNGKKYDGPEVDIWSLGVVLYALVEGSLPFDGQNL------KELR 264 (596)
T ss_pred eeeeccccceeecccc---cccccCCCCCccChHhhcCcccCCcceehhhhhhhheeeeecccccCCccc------cccc
Confidence 9999999998876443 3357889999999999998877 5789999999999999999999954432 1122
Q ss_pred HHHHhcCCCCCccCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCChHHHHH
Q 011360 430 RKVMNSKNPSRAIDPRLPGNGYEKKMLHVLKIAYICTLHDPEERPNSQYVRC 481 (487)
Q Consensus 430 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~~il~ 481 (487)
.+.+.+.. - ++. -.+.++-++++++|-.+|.+|++.++|.+
T Consensus 265 ~rvl~gk~---r----Ip~----~ms~dce~lLrk~lvl~Pskr~~~dqim~ 305 (596)
T KOG0586|consen 265 PRVLRGKY---R----IPF----YMSCDCEDLLRKFLVLNPSKRGPCDQIMK 305 (596)
T ss_pred chheeeee---c----ccc----eeechhHHHHHHhhccCccccCCHHHhhh
Confidence 22222111 1 111 12245889999999999999999999875
No 318
>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases. Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core
Probab=100.00 E-value=2.7e-35 Score=278.27 Aligned_cols=249 Identities=33% Similarity=0.485 Sum_probs=200.0
Q ss_pred cccccccccccceeEEEEEecCCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCCCCccccceE
Q 011360 194 FASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQIRHRNILPLLAH 273 (487)
Q Consensus 194 ~~~~~~lg~G~~g~v~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~ 273 (487)
|...+.||.|++|.||++... .++..+++|++... .......+.+|+..++.++||||++++++
T Consensus 2 y~~~~~l~~g~~~~v~~~~~~-~~~~~~~~k~~~~~---------------~~~~~~~~~~e~~~l~~l~~~~i~~~~~~ 65 (253)
T cd05122 2 FEILEKIGKGGFGEVYKARHK-RTGKEVAIKVIKLE---------------SKEKKEKIINEIQILKKCKHPNIVKYYGS 65 (253)
T ss_pred ceeeeeeccCCceEEEEEEEC-CCCcEEEEEEeccc---------------chhHHHHHHHHHHHHHhCCCCCEeEEEEE
Confidence 777889999999999999754 47889999988431 11245678889999999999999999999
Q ss_pred EecCCeeEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCCEEE
Q 011360 274 MVRPDCHLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVLLNDDMEACI 353 (487)
Q Consensus 274 ~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nill~~~~~~kl 353 (487)
+......++++||+++++|.+++... ...+++..+..++.|++.||.+| |+.|++||||+|+||+++.++.++|
T Consensus 66 ~~~~~~~~l~~e~~~~~~L~~~~~~~---~~~~~~~~~~~i~~~i~~~l~~l---h~~~i~h~dl~p~ni~i~~~~~~~l 139 (253)
T cd05122 66 YLKKDELWIVMEFCSGGSLKDLLKST---NQTLTESQIAYVCKELLKGLEYL---HSNGIIHRDIKAANILLTSDGEVKL 139 (253)
T ss_pred EecCCeEEEEEecCCCCcHHHHHhhc---CCCCCHHHHHHHHHHHHHHHHHh---hcCCEecCCCCHHHEEEccCCeEEE
Confidence 99999999999999999999998642 25789999999999999999999 7788999999999999999999999
Q ss_pred eccCCccccCCCCceeeEeeecccccccCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCccccCCCCccccHHHHHHHH
Q 011360 354 SDLGLAMAIPDGYTRVLISYVLGTMAYIAPEYFQQPELSEKCDIFSFGMLLISLVRGVPSFVFHQNGEEICSPEWLRKVM 433 (487)
Q Consensus 354 ~DFg~s~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DvwslG~~l~elltg~~pf~~~~~~~~~~~~~~~~~~~ 433 (487)
+|||.+........ .....++..|+|||.+.+..++.++|+||||+++|+|++|..||...+. ........
T Consensus 140 ~d~~~~~~~~~~~~---~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~------~~~~~~~~ 210 (253)
T cd05122 140 IDFGLSAQLSDTKA---RNTMVGTPYWMAPEVINGKPYDYKADIWSLGITAIELAEGKPPYSELPP------MKALFKIA 210 (253)
T ss_pred eecccccccccccc---ccceecCCcccCHHHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCch------HHHHHHHH
Confidence 99999887655432 1345588999999999988899999999999999999999999943321 11222121
Q ss_pred hcCCCCCccCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCChHHHHH
Q 011360 434 NSKNPSRAIDPRLPGNGYEKKMLHVLKIAYICTLHDPEERPNSQYVRC 481 (487)
Q Consensus 434 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~~il~ 481 (487)
. ..... .+.. ......+.+++.+||+.+|++|||+.++++
T Consensus 211 ~-~~~~~-----~~~~--~~~~~~~~~~i~~~l~~~p~~R~t~~~~l~ 250 (253)
T cd05122 211 T-NGPPG-----LRNP--EKWSDEFKDFLKKCLQKNPEKRPTAEQLLK 250 (253)
T ss_pred h-cCCCC-----cCcc--cccCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 1 11111 1111 112356899999999999999999999875
No 319
>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK
Probab=100.00 E-value=1.2e-35 Score=296.06 Aligned_cols=263 Identities=25% Similarity=0.349 Sum_probs=194.5
Q ss_pred ccccccccccccccceeEEEEEecCCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCCCCcccc
Q 011360 191 EDCFASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQIRHRNILPL 270 (487)
Q Consensus 191 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l 270 (487)
.+.|.+.+.||.|+||.||+|.. ..++..||+|.+... .........+.+|+.+++.++||||+++
T Consensus 15 ~~~y~~~~~lg~g~~g~V~~~~~-~~~~~~vaiK~~~~~-------------~~~~~~~~~~~~E~~~l~~l~h~~iv~~ 80 (353)
T cd07850 15 LKRYQNLKPIGSGAQGIVCAAYD-TVTGQNVAIKKLSRP-------------FQNVTHAKRAYRELVLMKLVNHKNIIGL 80 (353)
T ss_pred hcceEEEEEeccCCCEEEEEEEE-CCCCCEEEEEecCcc-------------ccChhHHHHHHHHHHHHHhcCCCCCcce
Confidence 35699999999999999999964 467899999987321 1112234456789999999999999999
Q ss_pred ceEEecC------CeeEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEE
Q 011360 271 LAHMVRP------DCHLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVL 344 (487)
Q Consensus 271 ~~~~~~~------~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nil 344 (487)
++++... ...|+||||+. ++|.+.+.. .++...+..++.|++.||.|| |+.|++||||||+||+
T Consensus 81 ~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~------~l~~~~~~~~~~ql~~aL~~L---H~~gi~H~dlkp~Nil 150 (353)
T cd07850 81 LNVFTPQKSLEEFQDVYLVMELMD-ANLCQVIQM------DLDHERMSYLLYQMLCGIKHL---HSAGIIHRDLKPSNIV 150 (353)
T ss_pred eeeeccCCCccccCcEEEEEeccC-CCHHHHHhh------cCCHHHHHHHHHHHHHHHHHH---HhCCeeeCCCCHHHEE
Confidence 9988643 34699999995 588887753 288889999999999999999 7788999999999999
Q ss_pred eCCCCCEEEeccCCccccCCCCceeeEeeecccccccCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCccccCCCCc--
Q 011360 345 LNDDMEACISDLGLAMAIPDGYTRVLISYVLGTMAYIAPEYFQQPELSEKCDIFSFGMLLISLVRGVPSFVFHQNGEE-- 422 (487)
Q Consensus 345 l~~~~~~kl~DFg~s~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DvwslG~~l~elltg~~pf~~~~~~~~-- 422 (487)
++.++.+||+|||++........ .....++..|+|||.+.+..++.++|||||||++|+|++|..||...+....
T Consensus 151 ~~~~~~~kL~Dfg~~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~ 227 (353)
T cd07850 151 VKSDCTLKILDFGLARTAGTSFM---MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGTVLFPGTDHIDQWN 227 (353)
T ss_pred ECCCCCEEEccCccceeCCCCCC---CCCCcccccccCHHHHhCCCCCCchhhHhHHHHHHHHHHCCCCCCCCCHHHHHH
Confidence 99999999999999986544322 1234578899999999999999999999999999999999999954321000
Q ss_pred -------cccHHHH-------HHHHhcCCCC---CccCCCCC--------CCCcHHHHHHHHHHHhhccCCCCCCCCChH
Q 011360 423 -------ICSPEWL-------RKVMNSKNPS---RAIDPRLP--------GNGYEKKMLHVLKIAYICTLHDPEERPNSQ 477 (487)
Q Consensus 423 -------~~~~~~~-------~~~~~~~~~~---~~~~~~~~--------~~~~~~~~~~l~~li~~cl~~~P~~RPs~~ 477 (487)
....++. ...... .+. ..+....+ ..........+.+++.+||+.||++|||+.
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ 306 (353)
T cd07850 228 KIIEQLGTPSDEFMSRLQPTVRNYVEN-RPKYAGYSFEELFPDVLFPPDSESHNKLKASQARDLLSKMLVIDPEKRISVD 306 (353)
T ss_pred HHHHhcCCCCHHHHHHhhhhhhHHhhc-CCCCCCcchhhhCcccccCcccccccccchhHHHHHHHHHcCCChhhCcCHH
Confidence 0000000 000000 000 00000000 001223456788999999999999999999
Q ss_pred HHHH
Q 011360 478 YVRC 481 (487)
Q Consensus 478 ~il~ 481 (487)
+++.
T Consensus 307 eiL~ 310 (353)
T cd07850 307 DALQ 310 (353)
T ss_pred HHhc
Confidence 9974
No 320
>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi
Probab=100.00 E-value=1.1e-35 Score=286.53 Aligned_cols=245 Identities=26% Similarity=0.321 Sum_probs=184.3
Q ss_pred ccccccceeEEEEEecCCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHH---HHhccCCCCCccccceEEe
Q 011360 199 KIGSGGCGEVYKAELPGSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEI---ITASQIRHRNILPLLAHMV 275 (487)
Q Consensus 199 ~lg~G~~g~v~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~---~~l~~l~hpnIv~l~~~~~ 275 (487)
.||+|+||.||++.. ..++..+|+|.+...... .........+|. .++....||||+.+++++.
T Consensus 1 ~lg~G~~g~Vy~~~~-~~~~~~~aiK~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 67 (279)
T cd05633 1 IIGRGGFGEVYGCRK-ADTGKMYAMKCLDKKRIK------------MKQGETLALNERIMLSLVSTGDCPFIVCMTYAFH 67 (279)
T ss_pred CcccCCCeEEEEEEE-CCCCcEEEEEEEEccccc------------cchHHHHHHHHHHHHHHHhhCCCCcEeEEEEEEe
Confidence 489999999999974 457899999987431110 011111222232 3344558999999999999
Q ss_pred cCCeeEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCCEEEec
Q 011360 276 RPDCHLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVLLNDDMEACISD 355 (487)
Q Consensus 276 ~~~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nill~~~~~~kl~D 355 (487)
.++..++||||+++|+|.+++.. ...+++..+..++.|++.||.|| |+.|++||||||+||+++.++.++|+|
T Consensus 68 ~~~~~~lv~e~~~~~~L~~~i~~----~~~l~~~~~~~i~~qi~~al~~l---H~~~ivH~dikp~Nil~~~~~~~~l~d 140 (279)
T cd05633 68 TPDKLCFILDLMNGGDLHYHLSQ----HGVFSEKEMRFYATEIILGLEHM---HNRFVVYRDLKPANILLDEHGHVRISD 140 (279)
T ss_pred cCCeEEEEEecCCCCCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHH---HHCCcCCCCCCHHHEEECCCCCEEEcc
Confidence 99999999999999999998864 45689999999999999999999 678899999999999999999999999
Q ss_pred cCCccccCCCCceeeEeeecccccccCCcccC-CCCCCchhHHHHHHHHHHHHHhCCCCccccCCCCccccHHHHHHHHh
Q 011360 356 LGLAMAIPDGYTRVLISYVLGTMAYIAPEYFQ-QPELSEKCDIFSFGMLLISLVRGVPSFVFHQNGEEICSPEWLRKVMN 434 (487)
Q Consensus 356 Fg~s~~~~~~~~~~~~~~~~gt~~y~aPE~l~-~~~~~~~~DvwslG~~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~ 434 (487)
||++........ ....|++.|+|||.+. +..++.++|||||||++|+|++|..||....... .........
T Consensus 141 fg~~~~~~~~~~----~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~----~~~~~~~~~ 212 (279)
T cd05633 141 LGLACDFSKKKP----HASVGTHGYMAPEVLQKGTAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKD----KHEIDRMTL 212 (279)
T ss_pred CCcceeccccCc----cCcCCCcCccCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcCCCCCcC----HHHHHHHhh
Confidence 999875533221 2345899999999886 4568999999999999999999999995433211 111211111
Q ss_pred cCCCCCccCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCC-----ChHHHHH
Q 011360 435 SKNPSRAIDPRLPGNGYEKKMLHVLKIAYICTLHDPEERP-----NSQYVRC 481 (487)
Q Consensus 435 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RP-----s~~~il~ 481 (487)
.. +..++ ...+..+.+++.+||..||++|| |++++++
T Consensus 213 ~~------~~~~~----~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~~~~ 254 (279)
T cd05633 213 TV------NVELP----DSFSPELKSLLEGLLQRDVSKRLGCLGRGAQEVKE 254 (279)
T ss_pred cC------CcCCc----cccCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHh
Confidence 11 11121 12335688999999999999999 5888876
No 321
>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of
Probab=100.00 E-value=9.9e-36 Score=286.44 Aligned_cols=248 Identities=29% Similarity=0.348 Sum_probs=190.8
Q ss_pred cccccceeEEEEEecCCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCCCCccccceEEecCCe
Q 011360 200 IGSGGCGEVYKAELPGSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQIRHRNILPLLAHMVRPDC 279 (487)
Q Consensus 200 lg~G~~g~v~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~ 279 (487)
||.|+||.||++.. ..+|+.||+|.+... ..........+..|+.+++.++||||+++++++...+.
T Consensus 1 lg~g~~g~vy~~~~-~~~~~~~~ik~~~~~------------~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~ 67 (277)
T cd05577 1 LGKGGFGEVCACQV-KATGKMYACKKLDKK------------RLKKRKGEQMALNEKKILEKVSSRFIVSLAYAFETKDD 67 (277)
T ss_pred CCCCCceeEEEEEE-cCCCcEEEEEEEehh------------hhhhhhhhHHHHHHHHHHHhCCCCCEeeeeeEEecCCe
Confidence 68999999999964 457899999987320 11112234456789999999999999999999999999
Q ss_pred eEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCCEEEeccCCc
Q 011360 280 HLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVLLNDDMEACISDLGLA 359 (487)
Q Consensus 280 ~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nill~~~~~~kl~DFg~s 359 (487)
.|+||||+++++|.+++.. .....+++..+..++.|++.||.|| |+.|++||||+|+||+++.++.++|+|||.+
T Consensus 68 ~~lv~e~~~~~~L~~~l~~--~~~~~~~~~~~~~~~~ql~~~l~~l---H~~~i~H~di~p~Nil~~~~~~~~l~dfg~~ 142 (277)
T cd05577 68 LCLVMTLMNGGDLKYHIYN--VGEPGFPEARAIFYAAQIICGLEHL---HQRRIVYRDLKPENVLLDDHGNVRISDLGLA 142 (277)
T ss_pred EEEEEecCCCCcHHHHHHH--cCcCCCCHHHHHHHHHHHHHHHHHH---HhCCcccCCCCHHHEEECCCCCEEEccCcch
Confidence 9999999999999999875 2234689999999999999999999 7788999999999999999999999999998
Q ss_pred cccCCCCceeeEeeecccccccCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCccccCCCCccccHHHHHHHHhcCCCC
Q 011360 360 MAIPDGYTRVLISYVLGTMAYIAPEYFQQPELSEKCDIFSFGMLLISLVRGVPSFVFHQNGEEICSPEWLRKVMNSKNPS 439 (487)
Q Consensus 360 ~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DvwslG~~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 439 (487)
........ .....++..|+|||.+.+..++.++||||||+++|+|++|..||........ . ..+...... .
T Consensus 143 ~~~~~~~~---~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~--~-~~~~~~~~~-~-- 213 (277)
T cd05577 143 VELKGGKK---IKGRAGTPGYMAPEVLQGEVYDFSVDWFALGCTLYEMIAGRSPFRQRKEKVE--K-EELKRRTLE-M-- 213 (277)
T ss_pred hhhccCCc---cccccCCCCcCCHHHhcCCCCCchhhhHHHHHHHHHHhhCCCCCCCCccccc--H-HHHHhcccc-c--
Confidence 76543211 1234578899999999888899999999999999999999999954432111 1 111111110 0
Q ss_pred CccCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCC-----ChHHHHH
Q 011360 440 RAIDPRLPGNGYEKKMLHVLKIAYICTLHDPEERP-----NSQYVRC 481 (487)
Q Consensus 440 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RP-----s~~~il~ 481 (487)
....+. ....++.+++.+||+.+|++|| ++.+++.
T Consensus 214 ---~~~~~~----~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~ 253 (277)
T cd05577 214 ---AVEYPD----KFSPEAKDLCEALLQKDPEKRLGCRGGSADEVRE 253 (277)
T ss_pred ---cccCCc----cCCHHHHHHHHHHccCChhHccCCCcccHHHHHh
Confidence 011111 1235688999999999999999 6666653
No 322
>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta. Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig
Probab=100.00 E-value=1.9e-35 Score=291.62 Aligned_cols=259 Identities=20% Similarity=0.339 Sum_probs=190.5
Q ss_pred cccccc--cceeEEEEEecCCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCCCCccccceEEe
Q 011360 198 EKIGSG--GCGEVYKAELPGSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQIRHRNILPLLAHMV 275 (487)
Q Consensus 198 ~~lg~G--~~g~v~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~ 275 (487)
..||.| +||.||+++. ..+|+.||+|.+... .......+.+.+|+.+++.++||||+++++++.
T Consensus 4 ~~ig~g~~~~~~v~~a~~-~~~~~~vaiK~~~~~-------------~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~ 69 (328)
T cd08226 4 VEIGRGFCNLTSVYLARH-TPTGTLVTVRITDLE-------------NCTEEHLKALQNEVVLSHFFRHPNIMTSWTVFT 69 (328)
T ss_pred HHhCCcccCceeEEEEEE-cCCCcEEEEEEeccc-------------cCCHHHHHHHHHHHHHHHhCCCCCcceEeeeEe
Confidence 356666 9999999974 568999999987321 112234567888999999999999999999999
Q ss_pred cCCeeEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCCEEEec
Q 011360 276 RPDCHLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVLLNDDMEACISD 355 (487)
Q Consensus 276 ~~~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nill~~~~~~kl~D 355 (487)
.++..++||||+.+++|.+++... ....+++..+..++.|++.||+|| |+.|++||||||+||+++.++.++++|
T Consensus 70 ~~~~~~~v~e~~~~~~l~~~l~~~--~~~~~~~~~~~~~~~qi~~aL~~l---H~~~ivHrDlkp~Nill~~~~~~~~~~ 144 (328)
T cd08226 70 TGSWLWVISPFMAYGSANSLLKTY--FPEGMSEALIGNILFGALRGLNYL---HQNGYIHRNIKASHILISGDGLVSLSG 144 (328)
T ss_pred cCCceEEEEecccCCCHHHHHHhh--cccCCCHHHHHHHHHHHHHHHHHH---HhCCeecCCCCHHHEEEeCCCcEEEec
Confidence 999999999999999999998753 234588899999999999999999 677899999999999999999999999
Q ss_pred cCCccccCCCCcee--e---EeeecccccccCCcccCCC--CCCchhHHHHHHHHHHHHHhCCCCccccCCCCccccHHH
Q 011360 356 LGLAMAIPDGYTRV--L---ISYVLGTMAYIAPEYFQQP--ELSEKCDIFSFGMLLISLVRGVPSFVFHQNGEEICSPEW 428 (487)
Q Consensus 356 Fg~s~~~~~~~~~~--~---~~~~~gt~~y~aPE~l~~~--~~~~~~DvwslG~~l~elltg~~pf~~~~~~~~~~~~~~ 428 (487)
|+.+.......... . .....++..|+|||++.+. .++.++|||||||++|+|++|..||...... ..
T Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~~l~el~~g~~p~~~~~~~------~~ 218 (328)
T cd08226 145 LSHLYSLVRNGQKAKVVYDFPQFSTSVLPWLSPELLRQDLYGYNVKSDIYSVGITACELATGRVPFQDMLRT------QM 218 (328)
T ss_pred hHHHhhhhccCccccccccccccccCccCccChhhhcCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCcChH------HH
Confidence 98654322211110 0 0112346679999998763 5789999999999999999999999543211 11
Q ss_pred HHHHHhcCC------------------------------------CCCccCCCCCCCCcHHHHHHHHHHHhhccCCCCCC
Q 011360 429 LRKVMNSKN------------------------------------PSRAIDPRLPGNGYEKKMLHVLKIAYICTLHDPEE 472 (487)
Q Consensus 429 ~~~~~~~~~------------------------------------~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~ 472 (487)
......... ........+...........+.+++.+||+.||++
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~ 298 (328)
T cd08226 219 LLQKLKGPPYSPLDITTFPCEESRMKNSQSGVDSGIGESVVAAGMTQTMTSERLRTPSSKTFSPAFQNLVELCLQQDPEK 298 (328)
T ss_pred HHHHhcCCCCCCccccccchhhhhhccchhhhhcccccchhccccccccccccccchhhhhhhHHHHHHHHHHccCCccc
Confidence 111110000 00000111111122345678999999999999999
Q ss_pred CCChHHHHH
Q 011360 473 RPNSQYVRC 481 (487)
Q Consensus 473 RPs~~~il~ 481 (487)
|||+.++++
T Consensus 299 Rpta~e~l~ 307 (328)
T cd08226 299 RPSASSLLS 307 (328)
T ss_pred CCCHHHHhh
Confidence 999999974
No 323
>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo
Probab=100.00 E-value=1.3e-35 Score=287.76 Aligned_cols=248 Identities=24% Similarity=0.426 Sum_probs=195.0
Q ss_pred cccccccccccceeEEEEEecCCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCCCCccccceE
Q 011360 194 FASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQIRHRNILPLLAH 273 (487)
Q Consensus 194 ~~~~~~lg~G~~g~v~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~ 273 (487)
|.....||.|+||.||++... .++..||+|++.. ........+.+|+.+++.++||||+++++.
T Consensus 22 ~~~~~~lg~g~~g~v~~~~~~-~~~~~v~iK~~~~---------------~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~ 85 (292)
T cd06657 22 LDNFIKIGEGSTGIVCIATVK-SSGKLVAVKKMDL---------------RKQQRRELLFNEVVIMRDYQHENVVEMYNS 85 (292)
T ss_pred hhhHHHcCCCCCeEEEEEEEc-CCCeEEEEEEecc---------------cchhHHHHHHHHHHHHHhcCCcchhheeeE
Confidence 445578999999999999754 5789999998632 112234568889999999999999999999
Q ss_pred EecCCeeEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCCEEE
Q 011360 274 MVRPDCHLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVLLNDDMEACI 353 (487)
Q Consensus 274 ~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nill~~~~~~kl 353 (487)
+...+..+++|||+++++|.+++.. ..+++..+..++.|++.||+|| |+.|++||||+|+||+++.++.++|
T Consensus 86 ~~~~~~~~lv~e~~~~~~L~~~~~~-----~~~~~~~~~~~~~ql~~~l~~l---H~~givH~dl~p~Nilv~~~~~~~l 157 (292)
T cd06657 86 YLVGDELWVVMEFLEGGALTDIVTH-----TRMNEEQIAAVCLAVLKALSVL---HAQGVIHRDIKSDSILLTHDGRVKL 157 (292)
T ss_pred EEeCCEEEEEEecCCCCcHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHH---HHCCeecCCCCHHHEEECCCCCEEE
Confidence 9999999999999999999988752 4578899999999999999999 6778999999999999999999999
Q ss_pred eccCCccccCCCCceeeEeeecccccccCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCccccCCCCccccHHHHHHHH
Q 011360 354 SDLGLAMAIPDGYTRVLISYVLGTMAYIAPEYFQQPELSEKCDIFSFGMLLISLVRGVPSFVFHQNGEEICSPEWLRKVM 433 (487)
Q Consensus 354 ~DFg~s~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DvwslG~~l~elltg~~pf~~~~~~~~~~~~~~~~~~~ 433 (487)
+|||++......... .....+++.|+|||.+.+..++.++|+||||+++|+|++|..||..... .+... ..
T Consensus 158 ~dfg~~~~~~~~~~~--~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slGvil~el~tg~~p~~~~~~------~~~~~-~~ 228 (292)
T cd06657 158 SDFGFCAQVSKEVPR--RKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPP------LKAMK-MI 228 (292)
T ss_pred cccccceeccccccc--ccccccCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH------HHHHH-HH
Confidence 999988765432211 1234588999999999888889999999999999999999999953221 11111 11
Q ss_pred hcCCCCCccCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCChHHHHH
Q 011360 434 NSKNPSRAIDPRLPGNGYEKKMLHVLKIAYICTLHDPEERPNSQYVRC 481 (487)
Q Consensus 434 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~~il~ 481 (487)
....+.. +.. .......+.+++.+||+.+|.+||++.+++.
T Consensus 229 ~~~~~~~-----~~~--~~~~~~~l~~li~~~l~~~P~~R~~~~~ll~ 269 (292)
T cd06657 229 RDNLPPK-----LKN--LHKVSPSLKGFLDRLLVRDPAQRATAAELLK 269 (292)
T ss_pred HhhCCcc-----cCC--cccCCHHHHHHHHHHHhCCcccCcCHHHHhc
Confidence 1111111 110 0112345788999999999999999999876
No 324
>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc
Probab=100.00 E-value=9.1e-36 Score=287.46 Aligned_cols=260 Identities=25% Similarity=0.339 Sum_probs=193.5
Q ss_pred cccccccccccceeEEEEEecCCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCCCCccccceE
Q 011360 194 FASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQIRHRNILPLLAH 273 (487)
Q Consensus 194 ~~~~~~lg~G~~g~v~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~ 273 (487)
|++.+.||.|++|.||+|.. ..+|..||+|++... .........+.+|+.+++.++||||++++++
T Consensus 1 y~~~~~l~~g~~~~vy~~~~-~~~~~~~~ik~~~~~-------------~~~~~~~~~~~~E~~~l~~l~~~~iv~~~~~ 66 (283)
T cd07835 1 YQKVEKIGEGTYGVVYKARD-KLTGEIVALKKIRLE-------------TEDEGVPSTAIREISLLKELNHPNIVRLLDV 66 (283)
T ss_pred CchheEecCCCCeEEEEEEE-cCCCCEEEEEEeecc-------------cccccchhHHHHHHHHHHhcCCCCccCHhhe
Confidence 56778999999999999975 457899999987431 1111223456789999999999999999999
Q ss_pred EecCCeeEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCCEEE
Q 011360 274 MVRPDCHLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVLLNDDMEACI 353 (487)
Q Consensus 274 ~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nill~~~~~~kl 353 (487)
+.+.+..|++|||++ ++|.+++... ....+++..+..++.|++.||.|| |+++++||||+|+||+++.++.++|
T Consensus 67 ~~~~~~~~iv~e~~~-~~l~~~~~~~--~~~~~~~~~~~~~~~~i~~~L~~l---H~~~~~H~dl~p~nil~~~~~~~~l 140 (283)
T cd07835 67 VHSENKLYLVFEFLD-LDLKKYMDSS--PLTGLDPPLIKSYLYQLLQGIAYC---HSHRVLHRDLKPQNLLIDREGALKL 140 (283)
T ss_pred eccCCeEEEEEeccC-cCHHHHHhhC--CCCCCCHHHHHHHHHHHHHHHHHH---HHCCeeCCCCCHHHEEEcCCCcEEE
Confidence 999999999999994 6899988652 224689999999999999999999 6678999999999999999999999
Q ss_pred eccCCccccCCCCceeeEeeecccccccCCcccCCC-CCCchhHHHHHHHHHHHHHhCCCCccccCCCCccccHHHHHHH
Q 011360 354 SDLGLAMAIPDGYTRVLISYVLGTMAYIAPEYFQQP-ELSEKCDIFSFGMLLISLVRGVPSFVFHQNGEEICSPEWLRKV 432 (487)
Q Consensus 354 ~DFg~s~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~-~~~~~~DvwslG~~l~elltg~~pf~~~~~~~~~~~~~~~~~~ 432 (487)
+|||++......... .....+++.|+|||++.+. .++.++|+||||+++|+|++|.+||....... .....
T Consensus 141 ~df~~~~~~~~~~~~--~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~------~~~~~ 212 (283)
T cd07835 141 ADFGLARAFGVPVRT--YTHEVVTLWYRAPEILLGSRQYSTPVDIWSIGCIFAEMVNRRPLFPGDSEID------QLFRI 212 (283)
T ss_pred eecccccccCCCccc--cCccccccCCCCCceeecCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH------HHHHH
Confidence 999998765432211 1223468899999987654 57899999999999999999999995432210 01111
Q ss_pred Hhc-CCCCC--------------cc---CCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCChHHHHH
Q 011360 433 MNS-KNPSR--------------AI---DPRLPGNGYEKKMLHVLKIAYICTLHDPEERPNSQYVRC 481 (487)
Q Consensus 433 ~~~-~~~~~--------------~~---~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~~il~ 481 (487)
... ..+.. .+ ............+..+.+++.+||+.+|.+|||+++++.
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~ 279 (283)
T cd07835 213 FRTLGTPDEDVWPGVTSLPDYKPTFPKWARQDLSKVVPNLDEDGLDLLSKMLVYDPAKRISAKAALQ 279 (283)
T ss_pred HHHhCCCChHHhhhhhhchhhhhhcccccccchhhhcCCCCHHHHHHHHHHhcCChhhCcCHHHHhc
Confidence 110 00000 00 000000111223356889999999999999999999875
No 325
>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10. Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing
Probab=100.00 E-value=8.2e-36 Score=291.70 Aligned_cols=261 Identities=27% Similarity=0.366 Sum_probs=193.9
Q ss_pred cccccccccccccceeEEEEEecCCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCCCCccccc
Q 011360 192 DCFASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQIRHRNILPLL 271 (487)
Q Consensus 192 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~ 271 (487)
++|.+.+.||.|+||.||+|.. ..+|..||+|++.... ........+.+|+.++.+++||||++++
T Consensus 7 ~~y~~~~~ig~g~~~~v~~~~~-~~~~~~vaiK~~~~~~-------------~~~~~~~~~~~E~~~l~~l~h~~i~~~~ 72 (309)
T cd07845 7 TEFEKLNRIGEGTYGIVYRARD-TTSGEIVALKKVRMDN-------------ERDGIPISSLREITLLLNLRHPNIVELK 72 (309)
T ss_pred cceeEeeeeeecCCEEEEEEEE-CCCCcEEEEEEEEecc-------------CCCCCcchhhHHHHHHHhCCCCCCcceE
Confidence 4699999999999999999975 4678999999884311 1111122446799999999999999999
Q ss_pred eEEecC--CeeEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCC
Q 011360 272 AHMVRP--DCHLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVLLNDDM 349 (487)
Q Consensus 272 ~~~~~~--~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nill~~~~ 349 (487)
+++... +..++||||+. ++|.+++... ...+++..+..++.|++.||.|| |+.|++||||+|+||+++.++
T Consensus 73 ~~~~~~~~~~~~lv~e~~~-~~l~~~l~~~---~~~l~~~~~~~~~~qi~~~l~~l---H~~~i~H~dl~p~nil~~~~~ 145 (309)
T cd07845 73 EVVVGKHLDSIFLVMEYCE-QDLASLLDNM---PTPFSESQVKCLMLQLLRGLQYL---HENFIIHRDLKVSNLLLTDKG 145 (309)
T ss_pred EEEecCCCCeEEEEEecCC-CCHHHHHHhc---ccCCCHHHHHHHHHHHHHHHHHH---HhCCeecCCCCHHHEEECCCC
Confidence 998754 56899999995 5888888642 35689999999999999999999 778899999999999999999
Q ss_pred CEEEeccCCccccCCCCceeeEeeecccccccCCcccCC-CCCCchhHHHHHHHHHHHHHhCCCCccccCCCCccccHHH
Q 011360 350 EACISDLGLAMAIPDGYTRVLISYVLGTMAYIAPEYFQQ-PELSEKCDIFSFGMLLISLVRGVPSFVFHQNGEEICSPEW 428 (487)
Q Consensus 350 ~~kl~DFg~s~~~~~~~~~~~~~~~~gt~~y~aPE~l~~-~~~~~~~DvwslG~~l~elltg~~pf~~~~~~~~~~~~~~ 428 (487)
.+||+|||++......... .....+++.|+|||.+.+ ..++.++||||||+++|+|++|.+||...+. .+.
T Consensus 146 ~~kL~dfg~~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~~f~~~~~------~~~ 217 (309)
T cd07845 146 CLKIADFGLARTYGLPAKP--MTPKVVTLWYRAPELLLGCTTYTTAIDMWAVGCILAELLAHKPLLPGKSE------IEQ 217 (309)
T ss_pred CEEECccceeeecCCccCC--CCcccccccccChhhhcCCCCcCchHHHHHHHHHHHHHHhCCCCCCCCCH------HHH
Confidence 9999999999876543211 122335788999998865 4688999999999999999999999954322 111
Q ss_pred HHHHHhc-CCCCCcc-----------CCCCCCC-------CcHHHHHHHHHHHhhccCCCCCCCCChHHHHH
Q 011360 429 LRKVMNS-KNPSRAI-----------DPRLPGN-------GYEKKMLHVLKIAYICTLHDPEERPNSQYVRC 481 (487)
Q Consensus 429 ~~~~~~~-~~~~~~~-----------~~~~~~~-------~~~~~~~~l~~li~~cl~~~P~~RPs~~~il~ 481 (487)
...+... +.+.... ...++.. .....+.++.+++.+||+.||++|||+++++.
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~~il~ 289 (309)
T cd07845 218 LDLIIQLLGTPNESIWPGFSDLPLVGKFTLPKQPYNNLKHKFPWLSEAGLRLLNFLLMYDPKKRATAEEALE 289 (309)
T ss_pred HHHHHHhcCCCChhhchhhhcccccccccccCCCCCchHHhccccCHHHHHHHHHHhcCChhhCcCHHHHhc
Confidence 2111110 0000000 0000000 01113566789999999999999999999875
No 326
>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl
Probab=100.00 E-value=5.2e-36 Score=292.94 Aligned_cols=266 Identities=21% Similarity=0.303 Sum_probs=191.8
Q ss_pred ccccccccccccccceeEEEEEecCCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCCCCcccc
Q 011360 191 EDCFASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQIRHRNILPL 270 (487)
Q Consensus 191 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l 270 (487)
-++|.+.+.||.|+||.||+|.. ..++..||+|.+.... ........+.+|+.++++++||||+++
T Consensus 11 ~~~y~~~~~lg~g~~~~v~~~~~-~~~~~~~aik~~~~~~-------------~~~~~~~~~~~e~~~l~~l~h~~iv~~ 76 (310)
T cd07865 11 VSKYEKLAKIGQGTFGEVFKARH-KKTKQIVALKKVLMEN-------------EKEGFPITALREIKILQLLKHENVVNL 76 (310)
T ss_pred hhheEEEEEeecCCCEEEEEEEE-CCCCcEEEEEEEeccC-------------CcCCchhHHHHHHHHHHhCCCCCccce
Confidence 34699999999999999999975 4578999999874311 111122345678999999999999999
Q ss_pred ceEEecCC--------eeEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCC
Q 011360 271 LAHMVRPD--------CHLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRN 342 (487)
Q Consensus 271 ~~~~~~~~--------~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~N 342 (487)
++++.... ..++||||+. ++|.+++.. ....+++..++.++.|++.||.|| |++|++|+||+|+|
T Consensus 77 ~~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~l~~---~~~~~~~~~~~~i~~qi~~al~~l---H~~~i~H~dl~p~n 149 (310)
T cd07865 77 IEICRTKATPYNRYKGSFYLVFEFCE-HDLAGLLSN---KNVKFTLSEIKKVMKMLLNGLYYI---HRNKILHRDMKAAN 149 (310)
T ss_pred EEEEecccccccCCCceEEEEEcCCC-cCHHHHHHh---cccCCCHHHHHHHHHHHHHHHHHH---HHCCeeccCCCHHH
Confidence 99887654 3499999995 588887753 234689999999999999999999 67789999999999
Q ss_pred EEeCCCCCEEEeccCCccccCCCCce--eeEeeecccccccCCcccCCC-CCCchhHHHHHHHHHHHHHhCCCCccccCC
Q 011360 343 VLLNDDMEACISDLGLAMAIPDGYTR--VLISYVLGTMAYIAPEYFQQP-ELSEKCDIFSFGMLLISLVRGVPSFVFHQN 419 (487)
Q Consensus 343 ill~~~~~~kl~DFg~s~~~~~~~~~--~~~~~~~gt~~y~aPE~l~~~-~~~~~~DvwslG~~l~elltg~~pf~~~~~ 419 (487)
|+++.++.+||+|||++......... .......++..|+|||.+.+. .++.++||||||+++|+|++|.+||.....
T Consensus 150 il~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~el~t~~~~~~~~~~ 229 (310)
T cd07865 150 ILITKDGILKLADFGLARAFSLSKNSKPNRYTNRVVTLWYRPPELLLGERDYGPPIDMWGAGCIMAEMWTRSPIMQGNTE 229 (310)
T ss_pred EEECCCCcEEECcCCCcccccCCcccCCCCccCcccCccccCcHHhcCCcccCchhhhHHHHHHHHHHHhCCCCCCCCCH
Confidence 99999999999999999765432211 111234578899999988664 478899999999999999999999954332
Q ss_pred CCccccHHHHHHHHhcCCCCCccCC----------CCCCCCc---------HHHHHHHHHHHhhccCCCCCCCCChHHHH
Q 011360 420 GEEICSPEWLRKVMNSKNPSRAIDP----------RLPGNGY---------EKKMLHVLKIAYICTLHDPEERPNSQYVR 480 (487)
Q Consensus 420 ~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~---------~~~~~~l~~li~~cl~~~P~~RPs~~~il 480 (487)
.. ....+.... +..+....+. ..+.... ......+.+++.+||..||.+|||+.+++
T Consensus 230 ~~---~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~dli~~~l~~~P~~R~t~~e~l 305 (310)
T cd07865 230 QH---QLTLISQLC-GSITPEVWPGVDKLELFKKMELPQGQKRKVKERLKPYVKDPHALDLIDKLLVLDPAKRIDADTAL 305 (310)
T ss_pred HH---HHHHHHHHh-CCCChhhcccccchhhhhhccCCCccchhhHHhcccccCCHHHHHHHHHHhcCChhhccCHHHHh
Confidence 10 001111110 1111000000 0000000 00124567899999999999999999987
Q ss_pred H
Q 011360 481 C 481 (487)
Q Consensus 481 ~ 481 (487)
+
T Consensus 306 ~ 306 (310)
T cd07865 306 N 306 (310)
T ss_pred c
Confidence 5
No 327
>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]
Probab=100.00 E-value=1.5e-36 Score=303.12 Aligned_cols=268 Identities=23% Similarity=0.352 Sum_probs=199.4
Q ss_pred cccccccccccceeEEEEEecCCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCCCCccccceE
Q 011360 194 FASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQIRHRNILPLLAH 273 (487)
Q Consensus 194 ~~~~~~lg~G~~g~v~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~ 273 (487)
+..-+.||.|+||.||+|+ +..+|+.||||.+.. .......+...+|++++++++|||||+++++
T Consensus 15 W~~~e~LG~Ga~g~V~rgr-nketG~~vAvK~~~~--------------~~~~r~~e~~~~EieilkKLnh~NIVk~f~i 79 (732)
T KOG4250|consen 15 WEMDERLGKGAFGNVYRGR-NKETGRLVAVKTFNK--------------ESSLRPRERWCREIEILKKLNHPNIVKLFDI 79 (732)
T ss_pred eeehhhhcCCccceeeeec-ccccccchhHHhhhh--------------hcccchHHHHHHHHHHHHHcCchhhhhhccc
Confidence 4556789999999999997 457999999998743 1233456778899999999999999999997
Q ss_pred EecCC------eeEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeC-
Q 011360 274 MVRPD------CHLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVLLN- 346 (487)
Q Consensus 274 ~~~~~------~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nill~- 346 (487)
-.+.. ...+|||||.||||...|+.- .+...+++...+.++.+++.||.|| |++||+||||||.||++-
T Consensus 80 ee~~~~~~~~~~~vlvmEyC~gGsL~~~L~~P-EN~~GLpE~e~l~lL~d~~~al~~L---rEn~IvHRDlKP~NIvl~~ 155 (732)
T KOG4250|consen 80 EETKFLGLVTRLPVLVMEYCSGGSLRKVLNSP-ENAYGLPESEFLDLLSDLVSALRHL---RENGIVHRDLKPGNIVLQI 155 (732)
T ss_pred CCccccCcccccceEEEeecCCCcHHHHhcCc-ccccCCCHHHHHHHHHHHHHHHHHH---HHcCceeccCCCCcEEEee
Confidence 66543 457999999999999999863 4567899999999999999999999 788999999999999984
Q ss_pred -CCCC--EEEeccCCccccCCCCceeeEeeecccccccCCcccC-CCCCCchhHHHHHHHHHHHHHhCCCCccccCCCCc
Q 011360 347 -DDME--ACISDLGLAMAIPDGYTRVLISYVLGTMAYIAPEYFQ-QPELSEKCDIFSFGMLLISLVRGVPSFVFHQNGEE 422 (487)
Q Consensus 347 -~~~~--~kl~DFg~s~~~~~~~~~~~~~~~~gt~~y~aPE~l~-~~~~~~~~DvwslG~~l~elltg~~pf~~~~~~~~ 422 (487)
.+|+ .||+|||.|+.+.++. ......||..|++||.+. ...|+..+|.|||||++|+.+||..||........
T Consensus 156 Gedgq~IyKLtDfG~Arel~d~s---~~~S~vGT~~YLhPel~E~q~~y~~tVDLWS~GvtlY~caTG~lPF~p~~~pk~ 232 (732)
T KOG4250|consen 156 GEDGQSIYKLTDFGAARELDDNS---LFTSLVGTEEYLHPELYERQKKYTATVDLWSFGVTLYECATGELPFIPFGGPKN 232 (732)
T ss_pred cCCCceEEeeecccccccCCCCC---eeeeecCchhhcChHHHhhccCcCceeehhhhhhHHHHHhccCCCCCcCCCccc
Confidence 3343 6999999999887664 346788999999999998 47899999999999999999999999965543321
Q ss_pred cccHHHHHHHHhcCCCCCc-------------cCCCCCC--CCcHHHHHHHHHHHhhccCCCCCCCC--ChHHHHHHHhh
Q 011360 423 ICSPEWLRKVMNSKNPSRA-------------IDPRLPG--NGYEKKMLHVLKIAYICTLHDPEERP--NSQYVRCRLSQ 485 (487)
Q Consensus 423 ~~~~~~~~~~~~~~~~~~~-------------~~~~~~~--~~~~~~~~~l~~li~~cl~~~P~~RP--s~~~il~~L~~ 485 (487)
.. +.+..... ..+... ....+|. .-.......+-+++..+|..+|.+|- .+.+..+.+..
T Consensus 233 ~~--~~~~~~~t-kkp~~v~i~~~~~eNgpv~~s~~lP~p~~Ls~~l~~~~~kwLa~~L~~~~~~~~~~~~~~~Fa~~~d 309 (732)
T KOG4250|consen 233 NK--EIMWHIIT-KKPSGVAIGAQEEENGPVEWSSTLPQPNHLSRGLATRLTKWLASMLEWNPRKRGHEGFDRFFAEVDD 309 (732)
T ss_pred cc--hhhhhhhc-cCCCceeEeeecccCCceeeeccCCCcccccHHHHhhhhHHHHHHHhhhHHHhCCCCcchHHHHHHH
Confidence 11 11111111 111111 1111221 12223344455666667777888887 55555555554
Q ss_pred h
Q 011360 486 L 486 (487)
Q Consensus 486 l 486 (487)
|
T Consensus 310 I 310 (732)
T KOG4250|consen 310 I 310 (732)
T ss_pred H
Confidence 4
No 328
>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK
Probab=100.00 E-value=2.9e-35 Score=279.23 Aligned_cols=253 Identities=27% Similarity=0.391 Sum_probs=202.3
Q ss_pred cccccccccccceeEEEEEecCCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCCCCccccceE
Q 011360 194 FASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQIRHRNILPLLAH 273 (487)
Q Consensus 194 ~~~~~~lg~G~~g~v~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~ 273 (487)
|...+.||.|++|.||+|... .++..|++|++... .........+.+|+..+++++||||+++++.
T Consensus 2 ~~~~~~i~~g~~~~v~~~~~~-~~~~~~~ik~~~~~-------------~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~ 67 (260)
T cd06606 2 WTRGELLGRGSFGSVYLALDK-DTGELMAVKSVELS-------------GDSEEELEALEREIRILSSLQHPNIVRYYGS 67 (260)
T ss_pred ceeeeEeeecCceEEEEEEEC-CCCcEEEEEEeecc-------------ccchHHHHHHHHHHHHHHHcCCCCEeeEEEE
Confidence 677889999999999999754 47889999987431 1113456778899999999999999999999
Q ss_pred EecC--CeeEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCCE
Q 011360 274 MVRP--DCHLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVLLNDDMEA 351 (487)
Q Consensus 274 ~~~~--~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nill~~~~~~ 351 (487)
+... ...+++|||+++++|.+++.. ...+++..+..++.|++.||.|| |+.|++|+||+|+||+++.++.+
T Consensus 68 ~~~~~~~~~~lv~e~~~~~~L~~~~~~----~~~~~~~~~~~~~~~l~~~l~~l---h~~~~~h~dl~p~ni~i~~~~~~ 140 (260)
T cd06606 68 ERDEEKNTLNIFLEYVSGGSLSSLLKK----FGKLPEPVIRKYTRQILEGLAYL---HSNGIVHRDIKGANILVDSDGVV 140 (260)
T ss_pred EecCCCCeEEEEEEecCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHH---HHCCccccCCCHHHEEEcCCCCE
Confidence 9988 889999999999999999875 23789999999999999999999 67889999999999999999999
Q ss_pred EEeccCCccccCCCCceeeEeeecccccccCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCccccCCCCccccHHHHHH
Q 011360 352 CISDLGLAMAIPDGYTRVLISYVLGTMAYIAPEYFQQPELSEKCDIFSFGMLLISLVRGVPSFVFHQNGEEICSPEWLRK 431 (487)
Q Consensus 352 kl~DFg~s~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DvwslG~~l~elltg~~pf~~~~~~~~~~~~~~~~~ 431 (487)
+|+|||.+................++..|+|||.+.+..++.++||||||+++|+|++|..||..... .......
T Consensus 141 ~l~d~~~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~-----~~~~~~~ 215 (260)
T cd06606 141 KLADFGCAKRLGDIETGEGTGSVRGTPYWMAPEVIRGEEYGRAADIWSLGCTVIEMATGKPPWSELGN-----PMAALYK 215 (260)
T ss_pred EEcccccEEecccccccccccCCCCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCc-----hHHHHHh
Confidence 99999999877654331112345688999999999888899999999999999999999999954431 1111111
Q ss_pred HHhcCCCCCccCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCChHHHHH
Q 011360 432 VMNSKNPSRAIDPRLPGNGYEKKMLHVLKIAYICTLHDPEERPNSQYVRC 481 (487)
Q Consensus 432 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~~il~ 481 (487)
....... . .++. .....+.+++.+||..+|++|||+.+++.
T Consensus 216 ~~~~~~~-~----~~~~----~~~~~l~~~i~~~l~~~p~~Rp~~~~ll~ 256 (260)
T cd06606 216 IGSSGEP-P----EIPE----HLSEEAKDFLRKCLRRDPKKRPTADELLQ 256 (260)
T ss_pred ccccCCC-c----CCCc----ccCHHHHHHHHHhCcCChhhCCCHHHHhh
Confidence 1111111 1 1111 12467999999999999999999999875
No 329
>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re
Probab=100.00 E-value=1.9e-35 Score=281.89 Aligned_cols=249 Identities=26% Similarity=0.369 Sum_probs=194.3
Q ss_pred cccccceeEEEEEecCCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCCCCccccceEEecCCe
Q 011360 200 IGSGGCGEVYKAELPGSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQIRHRNILPLLAHMVRPDC 279 (487)
Q Consensus 200 lg~G~~g~v~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~ 279 (487)
||.|+||.||++.. ..+++.+++|.+... ..........+.+|+.++++++||||+++++.+.....
T Consensus 1 lg~g~~~~vy~~~~-~~~~~~~~~k~~~~~------------~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~ 67 (265)
T cd05579 1 ISKGAYGRVFLAKK-KSTGDIYAIKVIKKA------------DMIRKNQVDQVLTERDILSQAQSPYVVKLYYSFQGKKN 67 (265)
T ss_pred CCCCCceEEEEEEE-CCCCCEEEEEEecch------------hhhhhhHHHHHHHHHHHHHhCCCcchhHHHHheecCcE
Confidence 68999999999975 456899999987321 11123455678889999999999999999999999999
Q ss_pred eEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCCEEEeccCCc
Q 011360 280 HLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVLLNDDMEACISDLGLA 359 (487)
Q Consensus 280 ~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nill~~~~~~kl~DFg~s 359 (487)
.|++|||+++++|.+++.. ...+++..+..++.|++.||.|| |+.|++|+||+|+||+++.++.++|+|||++
T Consensus 68 ~~lv~e~~~~~~L~~~l~~----~~~~~~~~~~~i~~qi~~~L~~l---H~~~i~H~di~~~nil~~~~~~~~l~dfg~~ 140 (265)
T cd05579 68 LYLVMEYLPGGDLASLLEN----VGSLDEDVARIYIAEIVLALEYL---HSNGIIHRDLKPDNILIDSNGHLKLTDFGLS 140 (265)
T ss_pred EEEEEecCCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHH---HHcCeecCCCCHHHeEEcCCCCEEEEecccc
Confidence 9999999999999999875 23689999999999999999999 6788999999999999999999999999998
Q ss_pred cccCCCCc------eeeEeeecccccccCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCccccCCCCccccHHHHHHHH
Q 011360 360 MAIPDGYT------RVLISYVLGTMAYIAPEYFQQPELSEKCDIFSFGMLLISLVRGVPSFVFHQNGEEICSPEWLRKVM 433 (487)
Q Consensus 360 ~~~~~~~~------~~~~~~~~gt~~y~aPE~l~~~~~~~~~DvwslG~~l~elltg~~pf~~~~~~~~~~~~~~~~~~~ 433 (487)
........ ........++..|+|||.+....++.++||||||+++|++++|..||.... ..+......
T Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~------~~~~~~~~~ 214 (265)
T cd05579 141 KVGLVRRQINLNDDEKEDKRIVGTPDYIAPEVILGQGHSKTVDWWSLGCILYEFLVGIPPFHGET------PEEIFQNIL 214 (265)
T ss_pred hhcccCcccccccccccccCcccCccccCHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCC------HHHHHHHHh
Confidence 76433311 111233457889999999988889999999999999999999999994332 122222222
Q ss_pred hcCCCCCccCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCChHHHHHHH
Q 011360 434 NSKNPSRAIDPRLPGNGYEKKMLHVLKIAYICTLHDPEERPNSQYVRCRL 483 (487)
Q Consensus 434 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~~il~~L 483 (487)
... .. .+.. ...+..+.+++.+||+.+|++|||+..+.+.|
T Consensus 215 ~~~-~~------~~~~--~~~~~~~~~~i~~~l~~~p~~Rpt~~~~~~~l 255 (265)
T cd05579 215 NGK-IE------WPED--VEVSDEAIDLISKLLVPDPEKRLGAKSIEEIK 255 (265)
T ss_pred cCC-cC------CCcc--ccCCHHHHHHHHHHhcCCHhhcCCCccHHHHh
Confidence 211 11 1111 01235688999999999999999995555544
No 330
>PLN00009 cyclin-dependent kinase A; Provisional
Probab=100.00 E-value=1.3e-35 Score=288.19 Aligned_cols=262 Identities=24% Similarity=0.304 Sum_probs=192.6
Q ss_pred cccccccccccccceeEEEEEecCCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCCCCccccc
Q 011360 192 DCFASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQIRHRNILPLL 271 (487)
Q Consensus 192 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~ 271 (487)
++|.+.+.||.|++|.||+|.. ..+++.||+|.+... .........+.+|+.+++.++||||++++
T Consensus 2 ~~y~~~~~l~~g~~~~v~~~~~-~~~~~~~~iK~~~~~-------------~~~~~~~~~~~~e~~~l~~l~h~~i~~~~ 67 (294)
T PLN00009 2 DQYEKVEKIGEGTYGVVYKARD-RVTNETIALKKIRLE-------------QEDEGVPSTAIREISLLKEMQHGNIVRLQ 67 (294)
T ss_pred CceEEEEEecCCCCEEEEEEEe-cCCCcEEEEEehhhc-------------cccccchHHHHHHHHHHHhccCCCEeeEE
Confidence 3588999999999999999975 457889999986321 11122345677899999999999999999
Q ss_pred eEEecCCeeEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCC-CCC
Q 011360 272 AHMVRPDCHLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVLLND-DME 350 (487)
Q Consensus 272 ~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nill~~-~~~ 350 (487)
+++......|+||||++ ++|.+++.. .....+++..+..++.|++.||.|| |++|++|+||+|+||+++. ++.
T Consensus 68 ~~~~~~~~~~lv~e~~~-~~l~~~~~~--~~~~~~~~~~~~~~~~qi~~aL~~L---H~~~i~H~dl~p~nill~~~~~~ 141 (294)
T PLN00009 68 DVVHSEKRLYLVFEYLD-LDLKKHMDS--SPDFAKNPRLIKTYLYQILRGIAYC---HSHRVLHRDLKPQNLLIDRRTNA 141 (294)
T ss_pred EEEecCCeEEEEEeccc-ccHHHHHHh--CCCCCcCHHHHHHHHHHHHHHHHHH---HhCCeeCCCCCcceEEEECCCCE
Confidence 99999999999999995 588887753 2233467888889999999999999 6788999999999999985 557
Q ss_pred EEEeccCCccccCCCCceeeEeeecccccccCCcccCCC-CCCchhHHHHHHHHHHHHHhCCCCccccCCCCccccHHHH
Q 011360 351 ACISDLGLAMAIPDGYTRVLISYVLGTMAYIAPEYFQQP-ELSEKCDIFSFGMLLISLVRGVPSFVFHQNGEEICSPEWL 429 (487)
Q Consensus 351 ~kl~DFg~s~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~-~~~~~~DvwslG~~l~elltg~~pf~~~~~~~~~~~~~~~ 429 (487)
+||+|||++......... .....+++.|+|||.+.+. .++.++||||||+++|+|+||.+||...... +..
T Consensus 142 ~kl~dfg~~~~~~~~~~~--~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~i~~~l~tg~~pf~~~~~~------~~~ 213 (294)
T PLN00009 142 LKLADFGLARAFGIPVRT--FTHEVVTLWYRAPEILLGSRHYSTPVDIWSVGCIFAEMVNQKPLFPGDSEI------DEL 213 (294)
T ss_pred EEEcccccccccCCCccc--cccCceeecccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHH------HHH
Confidence 999999999765432111 1233578899999988664 6789999999999999999999999543221 111
Q ss_pred HHHHh-cCCC-CCccC------------CCCCCC----CcHHHHHHHHHHHhhccCCCCCCCCChHHHHH
Q 011360 430 RKVMN-SKNP-SRAID------------PRLPGN----GYEKKMLHVLKIAYICTLHDPEERPNSQYVRC 481 (487)
Q Consensus 430 ~~~~~-~~~~-~~~~~------------~~~~~~----~~~~~~~~l~~li~~cl~~~P~~RPs~~~il~ 481 (487)
..... ...+ ....+ +..+.. .....+..+.+++.+||+.+|++||++.+++.
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~~l~ 283 (294)
T PLN00009 214 FKIFRILGTPNEETWPGVTSLPDYKSAFPKWPPKDLATVVPTLEPAGVDLLSKMLRLDPSKRITARAALE 283 (294)
T ss_pred HHHHHHhCCCChhhccccccchhhhhhcccCCCCCHHHhCcCCChHHHHHHHHHccCChhhCcCHHHHhc
Confidence 11111 0000 00000 000000 01123356889999999999999999999875
No 331
>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85. Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.
Probab=100.00 E-value=1.2e-35 Score=286.65 Aligned_cols=261 Identities=25% Similarity=0.383 Sum_probs=195.8
Q ss_pred ccccccccccccceeEEEEEecCCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCCCCccccce
Q 011360 193 CFASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQIRHRNILPLLA 272 (487)
Q Consensus 193 ~~~~~~~lg~G~~g~v~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~ 272 (487)
+|++.+.||.|++|.||+|+. ..++..||+|++.... .......+.+|+.++++++||||+++++
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~-~~~~~~~~iK~~~~~~--------------~~~~~~~~~~E~~~l~~l~h~~i~~~~~ 65 (284)
T cd07836 1 NFKQLEKLGEGTYATVYKGRN-RTTGEIVALKEIHLDA--------------EEGTPSTAIREISLMKELKHENIVRLHD 65 (284)
T ss_pred CceEeeeeccCCceEEEEEEE-CCCCeEEEEEEecccc--------------cccchHHHHHHHHHHHhhcCCCEeeeee
Confidence 378899999999999999975 4578999999884311 1122345667999999999999999999
Q ss_pred EEecCCeeEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCCEE
Q 011360 273 HMVRPDCHLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVLLNDDMEAC 352 (487)
Q Consensus 273 ~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nill~~~~~~k 352 (487)
++...+..++||||+++ +|.+++.... ....+++..+..++.|++.||.|| |+.|++||||+|+||++++++.++
T Consensus 66 ~~~~~~~~~lv~e~~~~-~l~~~~~~~~-~~~~~~~~~~~~~~~qi~~~l~~l---H~~~i~h~dl~p~ni~~~~~~~~~ 140 (284)
T cd07836 66 VIHTENKLMLVFEYMDK-DLKKYMDTHG-VRGALDPNTVKSFTYQLLKGIAFC---HENRVLHRDLKPQNLLINKRGELK 140 (284)
T ss_pred eEeeCCcEEEEEecCCc-cHHHHHHhcC-CCCCcCHHHHHHHHHHHHHHHHHH---HHCCeeeCCCCHHHEEECCCCcEE
Confidence 99999999999999975 8888886432 235689999999999999999999 778899999999999999999999
Q ss_pred EeccCCccccCCCCceeeEeeecccccccCCcccCC-CCCCchhHHHHHHHHHHHHHhCCCCccccCCCCccccHHHHHH
Q 011360 353 ISDLGLAMAIPDGYTRVLISYVLGTMAYIAPEYFQQ-PELSEKCDIFSFGMLLISLVRGVPSFVFHQNGEEICSPEWLRK 431 (487)
Q Consensus 353 l~DFg~s~~~~~~~~~~~~~~~~gt~~y~aPE~l~~-~~~~~~~DvwslG~~l~elltg~~pf~~~~~~~~~~~~~~~~~ 431 (487)
|+|||++......... .....++..|+|||.+.+ ..++.++||||||+++|+|++|..||...... +....
T Consensus 141 l~d~g~~~~~~~~~~~--~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~------~~~~~ 212 (284)
T cd07836 141 LADFGLARAFGIPVNT--FSNEVVTLWYRAPDVLLGSRTYSTSIDIWSVGCIMAEMITGRPLFPGTNNE------DQLLK 212 (284)
T ss_pred EeecchhhhhcCCccc--cccccccccccChHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcH------HHHHH
Confidence 9999998765332211 122346889999998865 45789999999999999999999999544321 11111
Q ss_pred HHhcC-CCC----------CccCCCCCCC-------CcHHHHHHHHHHHhhccCCCCCCCCChHHHHH
Q 011360 432 VMNSK-NPS----------RAIDPRLPGN-------GYEKKMLHVLKIAYICTLHDPEERPNSQYVRC 481 (487)
Q Consensus 432 ~~~~~-~~~----------~~~~~~~~~~-------~~~~~~~~l~~li~~cl~~~P~~RPs~~~il~ 481 (487)
..... .+. ..+....+.. .....+..+.+++.+||+.+|.+|||+.+++.
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~ 280 (284)
T cd07836 213 IFRIMGTPTESTWPGISQLPEYKPTFPRYPPQDLQQLFPHADPLGIDLLHRLLQLNPELRISAHDALQ 280 (284)
T ss_pred HHHHhCCCChhhHHHHhcCchhcccccCCChHHHHHHhhhcCcHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 11100 000 0000011100 11123456889999999999999999999874
No 332
>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1. Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron
Probab=100.00 E-value=3.6e-35 Score=288.14 Aligned_cols=250 Identities=27% Similarity=0.403 Sum_probs=195.7
Q ss_pred ccccccccccccceeEEEEEecCCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCCCCccccce
Q 011360 193 CFASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQIRHRNILPLLA 272 (487)
Q Consensus 193 ~~~~~~~lg~G~~g~v~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~ 272 (487)
.|...+.||.|+||.||+++. ..++..+|+|.+.... .........+..|+.+++.++|||++++++
T Consensus 26 ~f~~~~~lg~G~~~~v~~~~~-~~~~~~valK~~~~~~------------~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~ 92 (317)
T cd06635 26 LFTDLREIGHGSFGAVYFARD-VRTNEVVAIKKMSYSG------------KQSNEKWQDIIKEVKFLQRIKHPNSIEYKG 92 (317)
T ss_pred hhhhhheeccCCCeEEEEEEE-cCCCcEEEEEEEecCC------------CCchHHHHHHHHHHHHHHhCCCCCEEEEEE
Confidence 478889999999999999975 3578899999874311 112234456888999999999999999999
Q ss_pred EEecCCeeEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCCEE
Q 011360 273 HMVRPDCHLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVLLNDDMEAC 352 (487)
Q Consensus 273 ~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nill~~~~~~k 352 (487)
++..++..++||||+. |+|.+++.. ....+++..+..++.|++.||.|| |+.|++||||+|+||+++.++.++
T Consensus 93 ~~~~~~~~~lv~e~~~-g~l~~~~~~---~~~~l~~~~~~~i~~~i~~~l~~l---H~~~i~H~dL~p~Nil~~~~~~~k 165 (317)
T cd06635 93 CYLREHTAWLVMEYCL-GSASDLLEV---HKKPLQEVEIAAITHGALQGLAYL---HSHNMIHRDIKAGNILLTEPGQVK 165 (317)
T ss_pred EEeeCCeEEEEEeCCC-CCHHHHHHH---hcCCCCHHHHHHHHHHHHHHHHHH---HHCCcccCCCCcccEEECCCCCEE
Confidence 9999999999999996 578777653 245689999999999999999999 778899999999999999999999
Q ss_pred EeccCCccccCCCCceeeEeeecccccccCCcccC---CCCCCchhHHHHHHHHHHHHHhCCCCccccCCCCccccHHHH
Q 011360 353 ISDLGLAMAIPDGYTRVLISYVLGTMAYIAPEYFQ---QPELSEKCDIFSFGMLLISLVRGVPSFVFHQNGEEICSPEWL 429 (487)
Q Consensus 353 l~DFg~s~~~~~~~~~~~~~~~~gt~~y~aPE~l~---~~~~~~~~DvwslG~~l~elltg~~pf~~~~~~~~~~~~~~~ 429 (487)
|+|||++...... ....+++.|+|||++. ...++.++||||||+++|+|++|..||.... .....
T Consensus 166 l~dfg~~~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~------~~~~~ 233 (317)
T cd06635 166 LADFGSASIASPA------NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMN------AMSAL 233 (317)
T ss_pred EecCCCccccCCc------ccccCCccccChhhhhcCCCCCCCccccHHHHHHHHHHHHhCCCCCCCcc------HHHHH
Confidence 9999998654332 2345888999999874 4568899999999999999999999984321 11222
Q ss_pred HHHHhcCCCCCccCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCChHHHHHHH
Q 011360 430 RKVMNSKNPSRAIDPRLPGNGYEKKMLHVLKIAYICTLHDPEERPNSQYVRCRL 483 (487)
Q Consensus 430 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~~il~~L 483 (487)
........+. . .....+..+.+++.+||+.+|.+|||+.++++.+
T Consensus 234 ~~~~~~~~~~------~---~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~ 278 (317)
T cd06635 234 YHIAQNESPT------L---QSNEWSDYFRNFVDSCLQKIPQDRPTSEELLKHM 278 (317)
T ss_pred HHHHhccCCC------C---CCccccHHHHHHHHHHccCCcccCcCHHHHHhCh
Confidence 2222222111 1 1112335688999999999999999999998743
No 333
>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho
Probab=100.00 E-value=4.7e-35 Score=279.68 Aligned_cols=255 Identities=22% Similarity=0.328 Sum_probs=196.7
Q ss_pred ccccccccccccceeEEEEEecCCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCCCCccccce
Q 011360 193 CFASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQIRHRNILPLLA 272 (487)
Q Consensus 193 ~~~~~~~lg~G~~g~v~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~ 272 (487)
.|.+.+.||.|+||.||+|.. ..++..||+|.+.... ...........+.+|+.++++++||||+++++
T Consensus 3 ~~~~~~~lg~g~~g~v~~~~~-~~~~~~~~ik~~~~~~----------~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~ 71 (264)
T cd06653 3 NWRLGKLLGRGAFGEVYLCYD-ADTGRELAVKQVPFDP----------DSQETSKEVNALECEIQLLKNLRHDRIVQYYG 71 (264)
T ss_pred ceeeeeeEccCCCeEEEEEEE-cCCCCEEEEEEEecCc----------ccchhhHHHHHHHHHHHHHHHcCCCCcceEEE
Confidence 588999999999999999974 4678999999863211 00112234567889999999999999999999
Q ss_pred EEecC--CeeEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCC
Q 011360 273 HMVRP--DCHLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVLLNDDME 350 (487)
Q Consensus 273 ~~~~~--~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nill~~~~~ 350 (487)
++.+. ..++++|||+++++|.+++.. ...+++..+..++.|++.||.|| |+.|++|+||+|+||+++.++.
T Consensus 72 ~~~~~~~~~~~~v~e~~~~~~L~~~~~~----~~~l~~~~~~~~~~~i~~al~~L---H~~~i~H~dl~p~ni~i~~~~~ 144 (264)
T cd06653 72 CLRDPEEKKLSIFVEYMPGGSIKDQLKA----YGALTENVTRRYTRQILQGVSYL---HSNMIVHRDIKGANILRDSAGN 144 (264)
T ss_pred EEEcCCCCEEEEEEEeCCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHH---HhCCEecCCCCHHHEEEcCCCC
Confidence 88764 457899999999999999864 34578889999999999999999 7788999999999999999999
Q ss_pred EEEeccCCccccCCCCc-eeeEeeecccccccCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCccccCCCCccccHHHH
Q 011360 351 ACISDLGLAMAIPDGYT-RVLISYVLGTMAYIAPEYFQQPELSEKCDIFSFGMLLISLVRGVPSFVFHQNGEEICSPEWL 429 (487)
Q Consensus 351 ~kl~DFg~s~~~~~~~~-~~~~~~~~gt~~y~aPE~l~~~~~~~~~DvwslG~~l~elltg~~pf~~~~~~~~~~~~~~~ 429 (487)
++|+|||++........ ........++..|+|||.+.+..++.++|+||||+++|+|++|..||.... .....
T Consensus 145 ~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~------~~~~~ 218 (264)
T cd06653 145 VKLGDFGASKRIQTICMSGTGIKSVTGTPYWMSPEVISGEGYGRKADVWSVACTVVEMLTEKPPWAEYE------AMAAI 218 (264)
T ss_pred EEECccccccccccccccCccccccCCcccccCHhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCccC------HHHHH
Confidence 99999999976532111 111123458899999999998889999999999999999999999994321 12222
Q ss_pred HHHHhcCCCCCccCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCChHHHHH
Q 011360 430 RKVMNSKNPSRAIDPRLPGNGYEKKMLHVLKIAYICTLHDPEERPNSQYVRC 481 (487)
Q Consensus 430 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~~il~ 481 (487)
.+..... .... ++ ......+.+++.+||. +|..|||+.+++.
T Consensus 219 ~~~~~~~-~~~~----~p----~~~~~~~~~~i~~~l~-~~~~r~~~~~~~~ 260 (264)
T cd06653 219 FKIATQP-TKPM----LP----DGVSDACRDFLKQIFV-EEKRRPTAEFLLR 260 (264)
T ss_pred HHHHcCC-CCCC----CC----cccCHHHHHHHHHHhc-CcccCccHHHHhc
Confidence 2222111 1111 12 1233568899999999 5799999998865
No 334
>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=7.2e-38 Score=329.13 Aligned_cols=253 Identities=23% Similarity=0.348 Sum_probs=202.6
Q ss_pred ccccccccccccceeEEEEEecCCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCCCCccccce
Q 011360 193 CFASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQIRHRNILPLLA 272 (487)
Q Consensus 193 ~~~~~~~lg~G~~g~v~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~ 272 (487)
++.....+|.|.||+||.|. +..+|...|+|.+.... ........+.+|..++..++|||+|++||
T Consensus 1236 rWqrg~~Ig~G~fG~VYtav-N~~tGellAvKEI~iq~-------------~~~k~~~~i~eEm~vlE~lnHpNlV~YyG 1301 (1509)
T KOG4645|consen 1236 RWQRGNFIGGGTFGKVYTAV-NLDTGELLAVKEIKIQD-------------SDHKTFKLIAEEMKVLEGLNHPNLVRYYG 1301 (1509)
T ss_pred eeccccccCCcceeeeEEee-cCCccchhhhhhhhcCc-------------cccccCcchHHHHHHHHhccCccccccCc
Confidence 35566789999999999995 66799999999774321 11334567788999999999999999999
Q ss_pred EEecCCeeEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCCEE
Q 011360 273 HMVRPDCHLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVLLNDDMEAC 352 (487)
Q Consensus 273 ~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nill~~~~~~k 352 (487)
+-.+.+..+|.||||++|+|.+.++. ++..++.....+..|++.|++|| |++|||||||||.||+++.+|.+|
T Consensus 1302 VEvHRekv~IFMEyC~~GsLa~ll~~----gri~dE~vt~vyt~qll~gla~L---H~~gIVHRDIK~aNI~Ld~~g~iK 1374 (1509)
T KOG4645|consen 1302 VEVHREKVYIFMEYCEGGSLASLLEH----GRIEDEMVTRVYTKQLLEGLAYL---HEHGIVHRDIKPANILLDFNGLIK 1374 (1509)
T ss_pred eeecHHHHHHHHHHhccCcHHHHHHh----cchhhhhHHHHHHHHHHHHHHHH---HhcCceecCCCccceeeecCCcEE
Confidence 99999999999999999999999974 55677777888999999999999 788899999999999999999999
Q ss_pred EeccCCccccCCCCce--eeEeeecccccccCCcccCCC---CCCchhHHHHHHHHHHHHHhCCCCccccCCCCccccHH
Q 011360 353 ISDLGLAMAIPDGYTR--VLISYVLGTMAYIAPEYFQQP---ELSEKCDIFSFGMLLISLVRGVPSFVFHQNGEEICSPE 427 (487)
Q Consensus 353 l~DFg~s~~~~~~~~~--~~~~~~~gt~~y~aPE~l~~~---~~~~~~DvwslG~~l~elltg~~pf~~~~~~~~~~~~~ 427 (487)
++|||.|..+...... .......||+.|||||++.+. ....+.||||+||++.||+||+.||...++...
T Consensus 1375 ~~DFGsa~ki~~~~~~~~~el~~~~GT~~YMAPEvit~t~~kG~~~A~DiWslGCVVlEM~tGkrPW~~~dne~a----- 1449 (1509)
T KOG4645|consen 1375 YGDFGSAVKIKNNAQTMPGELQSMMGTPMYMAPEVITGTKGKGHGGAADIWSLGCVVLEMATGKRPWAELDNEWA----- 1449 (1509)
T ss_pred eecccceeEecCchhcCCHHHHhhcCCchhcCchhhcccccCCCCcchhhhcccceEEEeecCCCchhhccchhH-----
Confidence 9999999877554211 111345799999999999864 456789999999999999999999976655322
Q ss_pred HHHHHHhcCCCCCccCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCChHHHHH
Q 011360 428 WLRKVMNSKNPSRAIDPRLPGNGYEKKMLHVLKIAYICTLHDPEERPNSQYVRC 481 (487)
Q Consensus 428 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~~il~ 481 (487)
.+..+-.+..|+ +|. ..+.+-.+++..||..||++|=++.||++
T Consensus 1450 IMy~V~~gh~Pq------~P~----~ls~~g~dFle~Cl~~dP~~Rw~~~qlle 1493 (1509)
T KOG4645|consen 1450 IMYHVAAGHKPQ------IPE----RLSSEGRDFLEHCLEQDPKMRWTASQLLE 1493 (1509)
T ss_pred HHhHHhccCCCC------Cch----hhhHhHHHHHHHHHhcCchhhhHHHHHHH
Confidence 122232333321 222 24556788999999999999988887775
No 335
>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional
Probab=100.00 E-value=4.3e-35 Score=280.44 Aligned_cols=243 Identities=20% Similarity=0.269 Sum_probs=185.5
Q ss_pred ccccccccc--ccccceeEEEEEecCCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccC-CCCCcc
Q 011360 192 DCFASLEKI--GSGGCGEVYKAELPGSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQI-RHRNIL 268 (487)
Q Consensus 192 ~~~~~~~~l--g~G~~g~v~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpnIv 268 (487)
+.|.+.+.+ |.|+||.||++.. ..++..+|+|.+... ... . .|......+ +||||+
T Consensus 14 ~~~~~~~~~~lg~g~~g~v~~~~~-~~~~~~~~~k~~~~~-------------~~~-----~--~e~~~~~~~~~h~~iv 72 (267)
T PHA03390 14 KNCEIVKKLKLIDGKFGKVSVLKH-KPTQKLFVQKIIKAK-------------NFN-----A--IEPMVHQLMKDNPNFI 72 (267)
T ss_pred HhhccccceeecCCCceEEEEEEE-cCCCcEEEEEEEehh-------------hcc-----h--hhHHHHHHhhcCCCEE
Confidence 346666665 9999999999964 467889999987321 000 0 011111112 799999
Q ss_pred ccceEEecCCeeEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCC
Q 011360 269 PLLAHMVRPDCHLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVLLNDD 348 (487)
Q Consensus 269 ~l~~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nill~~~ 348 (487)
++++.+...+..|+||||+++++|.+++.. ...+++..+..++.|++.||.|| |+.|++||||+|+||+++.+
T Consensus 73 ~~~~~~~~~~~~~iv~e~~~~~~L~~~l~~----~~~l~~~~~~~~~~qi~~~l~~l---H~~~i~H~dl~p~nil~~~~ 145 (267)
T PHA03390 73 KLYYSVTTLKGHVLIMDYIKDGDLFDLLKK----EGKLSEAEVKKIIRQLVEALNDL---HKHNIIHNDIKLENVLYDRA 145 (267)
T ss_pred EEEEEEecCCeeEEEEEcCCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHH---HhCCeeeCCCCHHHEEEeCC
Confidence 999999999999999999999999999864 34789999999999999999999 77889999999999999998
Q ss_pred C-CEEEeccCCccccCCCCceeeEeeecccccccCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCccccCCCCccccHH
Q 011360 349 M-EACISDLGLAMAIPDGYTRVLISYVLGTMAYIAPEYFQQPELSEKCDIFSFGMLLISLVRGVPSFVFHQNGEEICSPE 427 (487)
Q Consensus 349 ~-~~kl~DFg~s~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DvwslG~~l~elltg~~pf~~~~~~~~~~~~~ 427 (487)
+ .++|+|||++....... ...++..|+|||++.+..++.++||||||+++|+|++|..||..... .......
T Consensus 146 ~~~~~l~dfg~~~~~~~~~------~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~-~~~~~~~ 218 (267)
T PHA03390 146 KDRIYLCDYGLCKIIGTPS------CYDGTLDYFSPEKIKGHNYDVSFDWWAVGVLTYELLTGKHPFKEDED-EELDLES 218 (267)
T ss_pred CCeEEEecCccceecCCCc------cCCCCCcccChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCc-chhhHHH
Confidence 8 99999999987654332 23588999999999988899999999999999999999999963322 1111112
Q ss_pred HHHHHHhcCCCCCccCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCC-hHHHHH
Q 011360 428 WLRKVMNSKNPSRAIDPRLPGNGYEKKMLHVLKIAYICTLHDPEERPN-SQYVRC 481 (487)
Q Consensus 428 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs-~~~il~ 481 (487)
+.... ..... .+ ...+..+.+++.+||+.+|.+||+ ++++++
T Consensus 219 ~~~~~---~~~~~-----~~----~~~~~~~~~li~~~l~~~p~~R~~~~~~~l~ 261 (267)
T PHA03390 219 LLKRQ---QKKLP-----FI----KNVSKNANDFVQSMLKYNINYRLTNYNEIIK 261 (267)
T ss_pred HHHhh---cccCC-----cc----cccCHHHHHHHHHHhccChhhCCchHHHHhc
Confidence 22111 11101 11 123456899999999999999996 588874
No 336
>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=9.9e-36 Score=284.21 Aligned_cols=267 Identities=28% Similarity=0.412 Sum_probs=202.8
Q ss_pred ccccccccccccccceeEEEEEecCCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHh--ccCCCCCcc
Q 011360 191 EDCFASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITA--SQIRHRNIL 268 (487)
Q Consensus 191 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l--~~l~hpnIv 268 (487)
.+.......+|+|.||.||+|++ +++.||||++.. .....+..|-.+. -.++|+||+
T Consensus 209 l~pl~l~eli~~Grfg~V~KaqL---~~~~VAVKifp~------------------~~kqs~~~Ek~Iy~lp~m~h~nIl 267 (534)
T KOG3653|consen 209 LDPLQLLELIGRGRFGCVWKAQL---DNRLVAVKIFPE------------------QEKQSFQNEKNIYSLPGMKHENIL 267 (534)
T ss_pred CCchhhHHHhhcCccceeehhhc---cCceeEEEecCH------------------HHHHHHHhHHHHHhccCccchhHH
Confidence 34577788999999999999987 678999999832 2334555555554 466999999
Q ss_pred ccceEEecCC----eeEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhc------CCCCeeecCC
Q 011360 269 PLLAHMVRPD----CHLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMY------HSASIIHGDI 338 (487)
Q Consensus 269 ~l~~~~~~~~----~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~------h~~givH~Dl 338 (487)
+|++.-.... .++||++|.+.|||.+||.. ..++|....+++..+++||+|||+- |...|+||||
T Consensus 268 ~Fi~~ekr~t~~~~eywLVt~fh~kGsL~dyL~~-----ntisw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDl 342 (534)
T KOG3653|consen 268 QFIGAEKRGTADRMEYWLVTEFHPKGSLCDYLKA-----NTISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRDL 342 (534)
T ss_pred HhhchhccCCccccceeEEeeeccCCcHHHHHHh-----ccccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCccccccc
Confidence 9999776554 78999999999999999984 6799999999999999999999974 5677999999
Q ss_pred CCCCEEeCCCCCEEEeccCCccccCCCCceeeEeeecccccccCCcccCCC-CCC-----chhHHHHHHHHHHHHHhCCC
Q 011360 339 KPRNVLLNDDMEACISDLGLAMAIPDGYTRVLISYVLGTMAYIAPEYFQQP-ELS-----EKCDIFSFGMLLISLVRGVP 412 (487)
Q Consensus 339 kp~Nill~~~~~~kl~DFg~s~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~-~~~-----~~~DvwslG~~l~elltg~~ 412 (487)
|..|||+..|++..|+|||+|..+..+.........+||.+|||||+|.+. ++. .+.||||+|.++|||+++-.
T Consensus 343 kSkNVLvK~DlTccIaDFGLAl~~~p~~~~~d~~~qVGT~RYMAPEvLEgainl~d~~Afkr~DvYamgLVLWEi~SRC~ 422 (534)
T KOG3653|consen 343 KSKNVLVKNDLTCCIADFGLALRLEPGKPQGDTHGQVGTRRYMAPEVLEGAINLQDRDAFKRIDVYAMGLVLWEIASRCT 422 (534)
T ss_pred cccceEEccCCcEEeeccceeEEecCCCCCcchhhhhhhhhhcCHHHHhhhcccccHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 999999999999999999999988766554444557899999999999864 222 36899999999999999743
Q ss_pred Ccc-ccCCC---------CccccHHHHHHHHhcCCCCCccCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCChHHHHHH
Q 011360 413 SFV-FHQNG---------EEICSPEWLRKVMNSKNPSRAIDPRLPGNGYEKKMLHVLKIAYICTLHDPEERPNSQYVRCR 482 (487)
Q Consensus 413 pf~-~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~~il~~ 482 (487)
-+. +..+. ......+.++..+-..+.+..++..+... ..+.-+.+.+..||+.||+-|.|+.=+-++
T Consensus 423 ~~~~~~vp~Yqlpfe~evG~hPt~e~mq~~VV~kK~RP~~p~~W~~h---~~~~~l~et~EeCWDhDaeARLTA~Cv~eR 499 (534)
T KOG3653|consen 423 DADPGPVPEYQLPFEAEVGNHPTLEEMQELVVRKKQRPKIPDAWRKH---AGMAVLCETIEECWDHDAEARLTAGCVEER 499 (534)
T ss_pred cccCCCCCcccCchhHHhcCCCCHHHHHHHHHhhccCCCChhhhhcC---ccHHHHHHHHHHHcCCchhhhhhhHHHHHH
Confidence 321 11110 01112333444444444433333322222 455678899999999999999999988877
Q ss_pred Hhhh
Q 011360 483 LSQL 486 (487)
Q Consensus 483 L~~l 486 (487)
+..+
T Consensus 500 ~~~l 503 (534)
T KOG3653|consen 500 MAEL 503 (534)
T ss_pred HHHH
Confidence 7654
No 337
>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]
Probab=100.00 E-value=7.1e-36 Score=312.78 Aligned_cols=254 Identities=26% Similarity=0.409 Sum_probs=188.4
Q ss_pred ccccccccccccccceeEEEEEecCCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCCCCcccc
Q 011360 191 EDCFASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQIRHRNILPL 270 (487)
Q Consensus 191 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l 270 (487)
..+|+.+..||+||||.||+++ ++-+|+.||||++.. .........+.+|+..+++|+|||||++
T Consensus 478 ~~DFEEL~lLGkGGFG~VvkVR-NKlDGr~YAIKKIpl--------------~~s~~~~skI~rEVk~LArLnHpNVVRY 542 (1351)
T KOG1035|consen 478 LNDFEELELLGKGGFGSVVKVR-NKLDGREYAIKKIPL--------------KASDKLYSKILREVKLLARLNHPNVVRY 542 (1351)
T ss_pred hhhhHHHHHhcCCCCceEEEEe-ecccchhhhhhhccC--------------chHHHHHHHHHHHHHHHhhcCCcceeee
Confidence 4568899999999999999997 557999999999854 1134456778999999999999999998
Q ss_pred ceEEecC-------------------------------------------------------------------------
Q 011360 271 LAHMVRP------------------------------------------------------------------------- 277 (487)
Q Consensus 271 ~~~~~~~------------------------------------------------------------------------- 277 (487)
|..|...
T Consensus 543 ysAWVEs~~~~~~~ei~~~~~~~~sQs~s~~~~~~~~~q~t~~p~~~~~~~~~~~~dd~sss~~~~~~~~~~~~d~e~~d 622 (1351)
T KOG1035|consen 543 YSAWVESTAELTVLEIVASDSESRSQSASKYNGVDIRYQPTSSPSLTLSELDSEDEDDKSSSYTTRKASYESSTDEENDD 622 (1351)
T ss_pred ehhhhccCCccccccccccchhhhcccCCCcccceeeeccCCCcccCcchhhccccCccccccccccccccccCCccccc
Confidence 8654210
Q ss_pred ----------------------------------------------CeeEEEEEecCCCCHHHHHhhhhcCCCCC-ChHH
Q 011360 278 ----------------------------------------------DCHLLVYEFMKNGSLQDILDDVSRGRREL-DWPS 310 (487)
Q Consensus 278 ----------------------------------------------~~~~lv~E~~~~gsL~~~l~~~~~~~~~l-~~~~ 310 (487)
..+||-||||+...|.++++. +... ....
T Consensus 623 ~dedg~~~S~tS~~e~~~~~d~~~ess~s~~~~~n~~e~~~~~q~~~~LYIQMEyCE~~ll~~iI~~----N~~~~~~d~ 698 (1351)
T KOG1035|consen 623 SDEDGRNLSNTSDSEGSVILDDTSESSESIPKTENSSEPMVPVQKPLILYIQMEYCEKTLLRDIIRR----NHFNSQRDE 698 (1351)
T ss_pred ccccccccccccccCCccccCcchhhhhhccccCCccccccccccceEEEEEHhhhhhhHHHHHHHh----cccchhhHH
Confidence 014788999998888887764 1111 4678
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCCEEEeccCCccccC----------------CCCceeeEeee
Q 011360 311 RHRIALGVASGLEYLHMYHSASIIHGDIKPRNVLLNDDMEACISDLGLAMAIP----------------DGYTRVLISYV 374 (487)
Q Consensus 311 ~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nill~~~~~~kl~DFg~s~~~~----------------~~~~~~~~~~~ 374 (487)
.++++++|++||.|+ |+.|||||||||.||++++++.|||+|||+++... .+......+..
T Consensus 699 ~wrLFreIlEGLaYI---H~~giIHRDLKP~NIFLd~~~~VKIGDFGLAt~~~~~~~~~d~~~~~~~~~~g~~~~~~Ts~ 775 (1351)
T KOG1035|consen 699 AWRLFREILEGLAYI---HDQGIIHRDLKPRNIFLDSRNSVKIGDFGLATDLKENLESIDQDLSFSTNRAGSNDGDLTSQ 775 (1351)
T ss_pred HHHHHHHHHHHHHHH---HhCceeeccCCcceeEEcCCCCeeecccccchhhhhhhhhHhhccCccccccCCCCcccccc
Confidence 899999999999999 89999999999999999999999999999998721 01111123456
Q ss_pred cccccccCCcccCCC---CCCchhHHHHHHHHHHHHHhCCCCccccCCCCccccHHHHHHHHhcCCCCCccCCCCCCCCc
Q 011360 375 LGTMAYIAPEYFQQP---ELSEKCDIFSFGMLLISLVRGVPSFVFHQNGEEICSPEWLRKVMNSKNPSRAIDPRLPGNGY 451 (487)
Q Consensus 375 ~gt~~y~aPE~l~~~---~~~~~~DvwslG~~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 451 (487)
+||.-|+|||++.+. .|+.|+|+||||++++||+. ||... .+....+..-..+. ++.. .+..
T Consensus 776 VGTalYvAPEll~~~~~~~Yn~KiDmYSLGIVlFEM~y---PF~Ts--------MERa~iL~~LR~g~--iP~~--~~f~ 840 (1351)
T KOG1035|consen 776 VGTALYVAPELLSDTSSNKYNSKIDMYSLGIVLFEMLY---PFGTS--------MERASILTNLRKGS--IPEP--ADFF 840 (1351)
T ss_pred cceeeeecHHHhcccccccccchhhhHHHHHHHHHHhc---cCCch--------HHHHHHHHhcccCC--CCCC--cccc
Confidence 799999999999865 49999999999999999996 45221 11111111111111 1111 1112
Q ss_pred HHHHHHHHHHHhhccCCCCCCCCChHHHHH
Q 011360 452 EKKMLHVLKIAYICTLHDPEERPNSQYVRC 481 (487)
Q Consensus 452 ~~~~~~l~~li~~cl~~~P~~RPs~~~il~ 481 (487)
.+....-.++|.++++.||++|||+.+++.
T Consensus 841 ~~~~~~e~slI~~Ll~hdP~kRPtA~eLL~ 870 (1351)
T KOG1035|consen 841 DPEHPEEASLIRWLLSHDPSKRPTATELLN 870 (1351)
T ss_pred cccchHHHHHHHHHhcCCCccCCCHHHHhh
Confidence 222234558999999999999999999875
No 338
>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast
Probab=100.00 E-value=5.7e-35 Score=276.84 Aligned_cols=250 Identities=26% Similarity=0.410 Sum_probs=200.9
Q ss_pred ccccccccccccceeEEEEEecCCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCCCCccccce
Q 011360 193 CFASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQIRHRNILPLLA 272 (487)
Q Consensus 193 ~~~~~~~lg~G~~g~v~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~ 272 (487)
+|.+.+.||.|++|.||++.. ..++..|++|.+... .........+.+|+.++.+++|||++++++
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~-~~~~~~~~ik~~~~~-------------~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~ 66 (254)
T cd06627 1 NYQLGDLIGRGAFGVVYKGLN-LETGDFVAIKQISLE-------------KIKEEALKSIMQEIDLLKNLKHPNIVKYIG 66 (254)
T ss_pred CceeeeEEcccCCeEEEEEEE-cCCCcEEEEEEeccc-------------ccCHHHHHHHHHHHHHHHhCCCCCccEEEE
Confidence 377889999999999999975 457789999988431 111245567889999999999999999999
Q ss_pred EEecCCeeEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCCEE
Q 011360 273 HMVRPDCHLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVLLNDDMEAC 352 (487)
Q Consensus 273 ~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nill~~~~~~k 352 (487)
++...+..+++|||+++++|.+++.. ...+++..+..++.|++.||.|| |+.|++||||+|+||+++.++.++
T Consensus 67 ~~~~~~~~~~v~e~~~~~~L~~~~~~----~~~l~~~~~~~~~~~i~~~l~~l---H~~~i~H~dl~p~ni~i~~~~~~~ 139 (254)
T cd06627 67 SIETSDSLYIILEYAENGSLRQIIKK----FGPFPESLVAVYVYQVLQGLAYL---HEQGVIHRDIKAANILTTKDGVVK 139 (254)
T ss_pred EEEeCCEEEEEEecCCCCcHHHHHHh----ccCCCHHHHHHHHHHHHHHHHHH---hhCCcccCCCCHHHEEECCCCCEE
Confidence 99999999999999999999999865 35789999999999999999999 788999999999999999999999
Q ss_pred EeccCCccccCCCCceeeEeeecccccccCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCccccCCCCccccHHHHHHH
Q 011360 353 ISDLGLAMAIPDGYTRVLISYVLGTMAYIAPEYFQQPELSEKCDIFSFGMLLISLVRGVPSFVFHQNGEEICSPEWLRKV 432 (487)
Q Consensus 353 l~DFg~s~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DvwslG~~l~elltg~~pf~~~~~~~~~~~~~~~~~~ 432 (487)
|+|||.+......... .....++..|+|||.+.+..++.++||||+|+++|+|++|..||..... .......
T Consensus 140 l~d~~~~~~~~~~~~~--~~~~~~~~~y~~pe~~~~~~~~~~~Dv~~lG~~l~~l~~g~~p~~~~~~------~~~~~~~ 211 (254)
T cd06627 140 LADFGVATKLNDVSKD--DASVVGTPYWMAPEVIEMSGASTASDIWSLGCTVIELLTGNPPYYDLNP------MAALFRI 211 (254)
T ss_pred EeccccceecCCCccc--ccccccchhhcCHhhhcCCCCCcchhHHHHHHHHHHHHhCCCCCCCccH------HHHHHHH
Confidence 9999999876544321 1234578899999999888889999999999999999999999943221 1111112
Q ss_pred HhcCCCCCccCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCChHHHHH
Q 011360 433 MNSKNPSRAIDPRLPGNGYEKKMLHVLKIAYICTLHDPEERPNSQYVRC 481 (487)
Q Consensus 433 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~~il~ 481 (487)
..... ..+++.+ +..+.+++.+||..+|++|||+.+++.
T Consensus 212 ~~~~~--~~~~~~~--------~~~~~~~i~~~l~~~p~~R~~~~~~l~ 250 (254)
T cd06627 212 VQDDH--PPLPEGI--------SPELKDFLMQCFQKDPNLRPTAKQLLK 250 (254)
T ss_pred hccCC--CCCCCCC--------CHHHHHHHHHHHhCChhhCcCHHHHhc
Confidence 11111 1122222 356889999999999999999999874
No 339
>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines
Probab=100.00 E-value=4.4e-35 Score=283.56 Aligned_cols=259 Identities=21% Similarity=0.303 Sum_probs=199.1
Q ss_pred cccccccccccceeEEEEEec--CCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccC-CCCCcccc
Q 011360 194 FASLEKIGSGGCGEVYKAELP--GSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQI-RHRNILPL 270 (487)
Q Consensus 194 ~~~~~~lg~G~~g~v~~~~~~--~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpnIv~l 270 (487)
|.+.+.||.|++|.||+++.. ..++..||+|.+... ...........+..|+.++.++ +||||+++
T Consensus 2 ~~~~~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~-----------~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~ 70 (288)
T cd05583 2 FELLRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKA-----------TIVQKAKTAEHTRTERQVLEAVRRCPFLVTL 70 (288)
T ss_pred ceEEEEeccCCCceEEEEEEeccccCCcEEEEEEEehH-----------HHHhhhhHHHHHHHHHHHHHhccCCcchhhh
Confidence 778899999999999999753 246788999987421 0111223445678899999999 69999999
Q ss_pred ceEEecCCeeEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCC
Q 011360 271 LAHMVRPDCHLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVLLNDDME 350 (487)
Q Consensus 271 ~~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nill~~~~~ 350 (487)
++.+..+...++||||+++|+|.+++.. ...+++..+..++.|++.||.|| |+.|++||||+|+||+++.++.
T Consensus 71 ~~~~~~~~~~~lv~e~~~~~~L~~~~~~----~~~~~~~~~~~~~~ql~~~l~~l---H~~~~~H~dl~p~nil~~~~~~ 143 (288)
T cd05583 71 HYAFQTDTKLHLILDYVNGGELFTHLYQ----REHFTESEVRVYIAEIVLALDHL---HQLGIIYRDIKLENILLDSEGH 143 (288)
T ss_pred heeeecCCEEEEEEecCCCCcHHHHHhh----cCCcCHHHHHHHHHHHHHHHHHH---HHCCeeccCCCHHHeEECCCCC
Confidence 9999999999999999999999998864 35688999999999999999999 6778999999999999999999
Q ss_pred EEEeccCCccccCCCCceeeEeeecccccccCCcccCCCC--CCchhHHHHHHHHHHHHHhCCCCccccCCCCccccHHH
Q 011360 351 ACISDLGLAMAIPDGYTRVLISYVLGTMAYIAPEYFQQPE--LSEKCDIFSFGMLLISLVRGVPSFVFHQNGEEICSPEW 428 (487)
Q Consensus 351 ~kl~DFg~s~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~--~~~~~DvwslG~~l~elltg~~pf~~~~~~~~~~~~~~ 428 (487)
++|+|||++.......... .....|+..|+|||.+.+.. ++.++|+||||+++|+|++|..||..... .....+.
T Consensus 144 ~~l~dfg~~~~~~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~--~~~~~~~ 220 (288)
T cd05583 144 VVLTDFGLSKEFLAEEEER-AYSFCGTIEYMAPEVIRGGSGGHDKAVDWWSLGVLTFELLTGASPFTVDGE--QNSQSEI 220 (288)
T ss_pred EEEEECccccccccccccc-cccccCCccccCHHHhcCCCCCCcchhhhHHHHHHHHHHHhCCCCcccCcc--cchHHHH
Confidence 9999999987654432211 12345889999999987654 78899999999999999999999954322 1111222
Q ss_pred HHHHHhcCCCCCccCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCChHHHHHHHh
Q 011360 429 LRKVMNSKNPSRAIDPRLPGNGYEKKMLHVLKIAYICTLHDPEERPNSQYVRCRLS 484 (487)
Q Consensus 429 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~~il~~L~ 484 (487)
.........+ .+.. ....+.+++.+||+.+|++|||+.++.+.|+
T Consensus 221 ~~~~~~~~~~-------~~~~----~~~~l~~li~~~l~~~p~~R~t~~~~~~~l~ 265 (288)
T cd05583 221 SRRILKSKPP-------FPKT----MSAEARDFIQKLLEKDPKKRLGANGADEIKN 265 (288)
T ss_pred HHHHHccCCC-------CCcc----cCHHHHHHHHHHhcCCHhhccCcchHHHHhc
Confidence 2222221111 1111 2245789999999999999999988877664
No 340
>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1. Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto
Probab=100.00 E-value=1.9e-35 Score=284.36 Aligned_cols=252 Identities=23% Similarity=0.366 Sum_probs=200.0
Q ss_pred ccccccccccccceeEEEEEecCCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCC-CCCccccc
Q 011360 193 CFASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQIR-HRNILPLL 271 (487)
Q Consensus 193 ~~~~~~~lg~G~~g~v~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-hpnIv~l~ 271 (487)
+|.+.+.||.|++|.||++.. ..++..||+|++... ..........+..|..++.++. ||||++++
T Consensus 2 ~y~~~~~lg~g~~~~vy~~~~-~~~~~~~~ik~~~~~------------~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~ 68 (280)
T cd05581 2 DFKFGKIIGEGSFSTVVLAKE-KETNKEYAIKILDKR------------QLIKEKKVKYVKIEKEVLTRLNGHPGIIKLY 68 (280)
T ss_pred CceEeeeecCCCceEEEEEEE-cCCCCEEEEEEechH------------hccchHHHHHHHHHHHHHHhcccCCCchhHH
Confidence 588899999999999999975 457899999987320 1112233467788999999998 99999999
Q ss_pred eEEecCCeeEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCCE
Q 011360 272 AHMVRPDCHLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVLLNDDMEA 351 (487)
Q Consensus 272 ~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nill~~~~~~ 351 (487)
+++...+..++||||+++++|.+++.. ...+++..+..++.|++.||.|| |+.|++|+||+|+||+++.++.+
T Consensus 69 ~~~~~~~~~~lv~e~~~~~~L~~~l~~----~~~l~~~~~~~i~~ql~~~l~~L---h~~~~~H~dl~~~ni~i~~~~~~ 141 (280)
T cd05581 69 YTFQDEENLYFVLEYAPNGELLQYIRK----YGSLDEKCTRFYAAEILLALEYL---HSKGIIHRDLKPENILLDKDMHI 141 (280)
T ss_pred HHhcCCceEEEEEcCCCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHH---HHCCeeecCCCHHHeEECCCCCE
Confidence 999999999999999999999999975 34799999999999999999999 67789999999999999999999
Q ss_pred EEeccCCccccCCCCce------------------eeEeeecccccccCCcccCCCCCCchhHHHHHHHHHHHHHhCCCC
Q 011360 352 CISDLGLAMAIPDGYTR------------------VLISYVLGTMAYIAPEYFQQPELSEKCDIFSFGMLLISLVRGVPS 413 (487)
Q Consensus 352 kl~DFg~s~~~~~~~~~------------------~~~~~~~gt~~y~aPE~l~~~~~~~~~DvwslG~~l~elltg~~p 413 (487)
+|+|||++......... .......++..|+|||.+....++.++|+||||++++++++|..|
T Consensus 142 ~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~~l~~g~~p 221 (280)
T cd05581 142 KITDFGTAKVLDPNSSPESNKGDATNIDSQIEKNRRRFASFVGTAEYVSPELLNEKPAGKSSDLWALGCIIYQMLTGKPP 221 (280)
T ss_pred EecCCccccccCCccccccCCCCCccccccccccccccccccCCccccCHHHhCCCCCChhhhHHHHHHHHHHHHhCCCC
Confidence 99999998765433211 111234578899999999888899999999999999999999999
Q ss_pred ccccCCCCccccHHHHHHHHhcCCCCCccCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCCh----HHHHH
Q 011360 414 FVFHQNGEEICSPEWLRKVMNSKNPSRAIDPRLPGNGYEKKMLHVLKIAYICTLHDPEERPNS----QYVRC 481 (487)
Q Consensus 414 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~----~~il~ 481 (487)
|..... ......... ....+...+ +..+.+++.+||+.+|++|||+ +++++
T Consensus 222 ~~~~~~------~~~~~~~~~---~~~~~~~~~--------~~~~~~li~~~l~~~p~~R~~~~~~~~~ll~ 276 (280)
T cd05581 222 FRGSNE------YLTFQKILK---LEYSFPPNF--------PPDAKDLIEKLLVLDPQDRLGVNEGYDELKA 276 (280)
T ss_pred CCCccH------HHHHHHHHh---cCCCCCCcc--------CHHHHHHHHHHhcCCHhhCCCcccCHHHHhc
Confidence 954431 111222221 111111122 3568899999999999999999 77764
No 341
>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2. Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin
Probab=100.00 E-value=4.5e-35 Score=286.32 Aligned_cols=251 Identities=27% Similarity=0.408 Sum_probs=194.4
Q ss_pred ccccccccccccccceeEEEEEecCCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCCCCcccc
Q 011360 191 EDCFASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQIRHRNILPL 270 (487)
Q Consensus 191 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l 270 (487)
.+.|...+.||.|+||.||+|.. ..++..+|+|.+.... .........+.+|+.+++.++|||++++
T Consensus 14 ~~~~~~~~~lg~g~~g~v~~~~~-~~~~~~~~ik~~~~~~------------~~~~~~~~~~~~e~~~l~~l~h~~i~~~ 80 (308)
T cd06634 14 EKLFSDLREIGHGSFGAVYFARD-VRNSEVVAIKKMSYSG------------KQSNEKWQDIIKEVRFLQKLRHPNTIQY 80 (308)
T ss_pred HHHHHHHHheeeCCCEEEEEEEE-cCCCcEEEEEEEeccc------------ccChHHHHHHHHHHHHHHhCCCCCcccE
Confidence 34588889999999999999975 4578899999874210 1122234567789999999999999999
Q ss_pred ceEEecCCeeEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCC
Q 011360 271 LAHMVRPDCHLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVLLNDDME 350 (487)
Q Consensus 271 ~~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nill~~~~~ 350 (487)
++++...+..++||||+. |+|.+++.. ....+++..+..++.|++.||.|| |+.|++||||+|+||+++.++.
T Consensus 81 ~~~~~~~~~~~lv~e~~~-~~l~~~~~~---~~~~l~~~~~~~~~~~l~~~l~~L---H~~~i~H~dl~p~nil~~~~~~ 153 (308)
T cd06634 81 RGCYLREHTAWLVMEYCL-GSASDLLEV---HKKPLQEVEIAAVTHGALQGLAYL---HSHNMIHRDVKAGNILLSEPGL 153 (308)
T ss_pred EEEEEcCCeeEEEEEccC-CCHHHHHHH---cCCCCCHHHHHHHHHHHHHHHHHH---HhCCcccCCCCHHhEEECCCCc
Confidence 999999999999999996 688777653 235688999999999999999999 6778999999999999999999
Q ss_pred EEEeccCCccccCCCCceeeEeeecccccccCCcccC---CCCCCchhHHHHHHHHHHHHHhCCCCccccCCCCccccHH
Q 011360 351 ACISDLGLAMAIPDGYTRVLISYVLGTMAYIAPEYFQ---QPELSEKCDIFSFGMLLISLVRGVPSFVFHQNGEEICSPE 427 (487)
Q Consensus 351 ~kl~DFg~s~~~~~~~~~~~~~~~~gt~~y~aPE~l~---~~~~~~~~DvwslG~~l~elltg~~pf~~~~~~~~~~~~~ 427 (487)
++|+|||++...... ....+++.|+|||.+. ...++.++||||||+++|+|++|..||.... ..+
T Consensus 154 ~kl~dfg~~~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~------~~~ 221 (308)
T cd06634 154 VKLGDFGSASIMAPA------NXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMN------AMS 221 (308)
T ss_pred EEECCcccceeecCc------ccccCCccccCHHHHhhcccCCCCcccchHHHHHHHHHHHcCCCCCcccc------HHH
Confidence 999999998765332 2345788999999874 3467889999999999999999999983321 112
Q ss_pred HHHHHHhcCCCCCccCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCChHHHHHH
Q 011360 428 WLRKVMNSKNPSRAIDPRLPGNGYEKKMLHVLKIAYICTLHDPEERPNSQYVRCR 482 (487)
Q Consensus 428 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~~il~~ 482 (487)
..........+ . .. .......+.+++.+||+.+|++||++.+++..
T Consensus 222 ~~~~~~~~~~~-~-----~~---~~~~~~~~~~li~~cl~~~P~~Rp~~~~ll~~ 267 (308)
T cd06634 222 ALYHIAQNESP-A-----LQ---SGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKH 267 (308)
T ss_pred HHHHHhhcCCC-C-----cC---cccccHHHHHHHHHHhhCCcccCCCHHHHhhC
Confidence 22222222111 1 11 11233568899999999999999999998763
No 342
>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both
Probab=100.00 E-value=4.8e-35 Score=282.78 Aligned_cols=259 Identities=26% Similarity=0.340 Sum_probs=191.8
Q ss_pred cccccccccccceeEEEEEecCCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhcc---CCCCCcccc
Q 011360 194 FASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQ---IRHRNILPL 270 (487)
Q Consensus 194 ~~~~~~lg~G~~g~v~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~---l~hpnIv~l 270 (487)
|.+.+.||.|+||.||+|.+. .++..||+|.+..... .......+.+|+.++.+ +.||||+++
T Consensus 1 y~~~~~l~~g~~~~v~~~~~~-~~~~~~aiK~~~~~~~-------------~~~~~~~~~~e~~~l~~l~~~~h~~i~~~ 66 (287)
T cd07838 1 YEELAEIGEGAYGTVYKARDL-NTGRFVALKKVRVPLS-------------EEGIPLSTLREIALLKQLESFEHPNIVRL 66 (287)
T ss_pred CeEEEEecccCceEEEEEEEC-CCCCEEEEEEeccccc-------------cchhhhhHHHHHHHHHHhhccCCCCcceE
Confidence 567789999999999999864 4688999998843211 11112234456655544 479999999
Q ss_pred ceEEecCCe-----eEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEe
Q 011360 271 LAHMVRPDC-----HLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVLL 345 (487)
Q Consensus 271 ~~~~~~~~~-----~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nill 345 (487)
++++...+. .+++|||+. ++|.+++... ....+++..+..++.|++.||.|| |+.|++|+||+|+||++
T Consensus 67 ~~~~~~~~~~~~~~~~l~~e~~~-~~l~~~l~~~--~~~~l~~~~~~~~~~~i~~al~~L---H~~~i~h~~l~~~nili 140 (287)
T cd07838 67 LDVCHGPRTDRELKLTLVFEHVD-QDLATYLSKC--PKPGLPPETIKDLMRQLLRGVDFL---HSHRIVHRDLKPQNILV 140 (287)
T ss_pred EEEEeeccCCCCceeEEEehhcc-cCHHHHHHHc--cCCCCCHHHHHHHHHHHHHHHHHH---HHCCeeeccCChhhEEE
Confidence 999988776 899999996 5898888652 234689999999999999999999 67789999999999999
Q ss_pred CCCCCEEEeccCCccccCCCCceeeEeeecccccccCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCccccCCCCcccc
Q 011360 346 NDDMEACISDLGLAMAIPDGYTRVLISYVLGTMAYIAPEYFQQPELSEKCDIFSFGMLLISLVRGVPSFVFHQNGEEICS 425 (487)
Q Consensus 346 ~~~~~~kl~DFg~s~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DvwslG~~l~elltg~~pf~~~~~~~~~~~ 425 (487)
+.++.++|+|||.+......... ....++..|+|||.+.+..++.++|+||||+++|+|++|.+||.....
T Consensus 141 ~~~~~~~l~dfg~~~~~~~~~~~---~~~~~~~~~~~PE~~~~~~~~~~~Di~s~G~~l~~l~~~~~~~~~~~~------ 211 (287)
T cd07838 141 TSDGQVKIADFGLARIYSFEMAL---TSVVVTLWYRAPEVLLQSSYATPVDMWSVGCIFAELFRRRPLFRGTSE------ 211 (287)
T ss_pred ccCCCEEEeccCcceeccCCccc---ccccccccccChHHhccCCCCCcchhhhHHHHHHHHHhCCCcccCCCh------
Confidence 99999999999998776433221 233478899999999988899999999999999999999999854322
Q ss_pred HHHHHHHHhcCCC-------------CCccCC---CCCCCCcHHHHHHHHHHHhhccCCCCCCCCChHHHHH
Q 011360 426 PEWLRKVMNSKNP-------------SRAIDP---RLPGNGYEKKMLHVLKIAYICTLHDPEERPNSQYVRC 481 (487)
Q Consensus 426 ~~~~~~~~~~~~~-------------~~~~~~---~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~~il~ 481 (487)
.+........... ...... .............+.+++.+||+.||++||++.+++.
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~il~ 283 (287)
T cd07838 212 ADQLDKIFDVIGLPSEEEWPRNVSLPRSSFPSYTPRSFKSFVPEICEEGLDLLKKMLTFNPHKRISAFEALQ 283 (287)
T ss_pred HHHHHHHHHHcCCCChHhcCCCcccchhhcccccccchhhhhhhhhHHHHHHHHHHhccCCccCCCHHHHhc
Confidence 1222222211000 000000 0011112244567889999999999999999999874
No 343
>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7. Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it
Probab=100.00 E-value=7.8e-35 Score=282.99 Aligned_cols=254 Identities=23% Similarity=0.413 Sum_probs=191.3
Q ss_pred ccccccccccccccceeEEEEEecCCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccC-CCCCccc
Q 011360 191 EDCFASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQI-RHRNILP 269 (487)
Q Consensus 191 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpnIv~ 269 (487)
.+.|.+.+.||.|+||.||+|.++ .++..||||.+... ........+..|+.++... .||||++
T Consensus 14 ~~~~~~~~~lg~g~~~~v~~~~~~-~~~~~~avK~~~~~--------------~~~~~~~~~~~e~~~~~~~~~~~~i~~ 78 (296)
T cd06618 14 LNDLENLGEIGSGTCGQVYKMRFK-KTGHVMAVKQMRRT--------------GNKEENKRILMDLDVVLKSHDCPYIVK 78 (296)
T ss_pred cchheeeeEeeccCCeEEEEEEEC-CCCeEEEEEEEecc--------------CChHHHHHHHHHHHHHHhccCCCchHh
Confidence 356899999999999999999864 45889999988431 1112233455566655555 5999999
Q ss_pred cceEEecCCeeEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCC
Q 011360 270 LLAHMVRPDCHLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVLLNDDM 349 (487)
Q Consensus 270 l~~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nill~~~~ 349 (487)
+++++......|++|||+ +++|.+++... ...+++..+..++.|++.||.|||+ ..||+||||+|+||+++.++
T Consensus 79 ~~~~~~~~~~~~~v~e~~-~~~l~~l~~~~---~~~l~~~~~~~i~~~i~~~l~~lH~--~~~i~H~dl~p~nill~~~~ 152 (296)
T cd06618 79 CYGYFITDSDVFICMELM-STCLDKLLKRI---QGPIPEDILGKMTVAIVKALHYLKE--KHGVIHRDVKPSNILLDASG 152 (296)
T ss_pred hheeeecCCeEEEEeecc-CcCHHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHh--hCCEecCCCcHHHEEEcCCC
Confidence 999999999999999998 55787777542 3478999999999999999999942 25899999999999999999
Q ss_pred CEEEeccCCccccCCCCceeeEeeecccccccCCcccCCCC----CCchhHHHHHHHHHHHHHhCCCCccccCCCCcccc
Q 011360 350 EACISDLGLAMAIPDGYTRVLISYVLGTMAYIAPEYFQQPE----LSEKCDIFSFGMLLISLVRGVPSFVFHQNGEEICS 425 (487)
Q Consensus 350 ~~kl~DFg~s~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~----~~~~~DvwslG~~l~elltg~~pf~~~~~~~~~~~ 425 (487)
.+||+|||++......... ....++..|+|||.+.+.. ++.++||||||+++|+|++|+.||..... .
T Consensus 153 ~~kL~dfg~~~~~~~~~~~---~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~-----~ 224 (296)
T cd06618 153 NVKLCDFGISGRLVDSKAK---TRSAGCAAYMAPERIDPPDPNPKYDIRADVWSLGISLVELATGQFPYKNCKT-----E 224 (296)
T ss_pred CEEECccccchhccCCCcc---cCCCCCccccCHhhcCCCCCccccccchhHHHHHHHHHHHHhCCCCCCcchh-----H
Confidence 9999999998765433221 2234788999999987543 78899999999999999999999943211 1
Q ss_pred HHHHHHHHhcCCCCCccCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCChHHHHH
Q 011360 426 PEWLRKVMNSKNPSRAIDPRLPGNGYEKKMLHVLKIAYICTLHDPEERPNSQYVRC 481 (487)
Q Consensus 426 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~~il~ 481 (487)
.+..........+. ++.. .....++.+++.+||+.+|++|||+.+++.
T Consensus 225 ~~~~~~~~~~~~~~------~~~~--~~~~~~l~~li~~~l~~~p~~Rp~~~~il~ 272 (296)
T cd06618 225 FEVLTKILQEEPPS------LPPN--EGFSPDFCSFVDLCLTKDHRKRPKYRELLQ 272 (296)
T ss_pred HHHHHHHhcCCCCC------CCCC--CCCCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 12233333322111 1110 012356899999999999999999999875
No 344
>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5. Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the
Probab=100.00 E-value=7.5e-36 Score=295.22 Aligned_cols=265 Identities=25% Similarity=0.339 Sum_probs=194.4
Q ss_pred cccccccccccccceeEEEEEecCCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCCCCccccc
Q 011360 192 DCFASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQIRHRNILPLL 271 (487)
Q Consensus 192 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~ 271 (487)
++|.+.+.||.|+||.||+|.. ..++..||+|++... .........+.+|+.+++.++||||++++
T Consensus 5 ~~y~~~~~lg~g~~g~v~~~~~-~~~~~~valK~~~~~-------------~~~~~~~~~~~~e~~~l~~l~h~~iv~~~ 70 (334)
T cd07855 5 SRYKPIENIGSGAYGVVCSAID-TRSGKKVAIKKIPHA-------------FDVPTLAKRTLRELKILRHFKHDNIIAIR 70 (334)
T ss_pred hceeeeeeeecCCCeEEEEEEE-cCCCCEEEEEEeccc-------------cccccchHHHHHHHHHHHhcCCCCccCHH
Confidence 5699999999999999999974 467899999987321 11122345667899999999999999999
Q ss_pred eEEec----CCeeEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCC
Q 011360 272 AHMVR----PDCHLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVLLND 347 (487)
Q Consensus 272 ~~~~~----~~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nill~~ 347 (487)
+++.. ....|+||||+. ++|.+++.. ...+++..+..++.|++.||.|| |++|++||||||+||+++.
T Consensus 71 ~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~----~~~~~~~~~~~i~~qi~~aL~~L---H~~~ivH~dlkp~Nil~~~ 142 (334)
T cd07855 71 DILRPPGADFKDVYVVMDLME-SDLHHIIHS----DQPLTEEHIRYFLYQLLRGLKYI---HSANVIHRDLKPSNLLVNE 142 (334)
T ss_pred HhccccCCCCceEEEEEehhh-hhHHHHhcc----CCCCCHHHHHHHHHHHHHHHHHH---HHCCeecCCCCHHHEEEcC
Confidence 98763 356799999995 688888753 45589999999999999999999 6778999999999999999
Q ss_pred CCCEEEeccCCccccCCCCce--eeEeeecccccccCCcccCC-CCCCchhHHHHHHHHHHHHHhCCCCccccCCCCcc-
Q 011360 348 DMEACISDLGLAMAIPDGYTR--VLISYVLGTMAYIAPEYFQQ-PELSEKCDIFSFGMLLISLVRGVPSFVFHQNGEEI- 423 (487)
Q Consensus 348 ~~~~kl~DFg~s~~~~~~~~~--~~~~~~~gt~~y~aPE~l~~-~~~~~~~DvwslG~~l~elltg~~pf~~~~~~~~~- 423 (487)
++.+||+|||++......... .......++..|+|||.+.+ ..++.++||||||+++|+|++|..||.........
T Consensus 143 ~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~l~el~~g~~pf~~~~~~~~~~ 222 (334)
T cd07855 143 DCELRIGDFGMARGLSSSPTEHKYFMTEYVATRWYRAPELLLSLPEYTTAIDMWSVGCIFAEMLGRRQLFPGKNYVHQLK 222 (334)
T ss_pred CCcEEecccccceeecccCcCCCcccccccccccccChHHhcCCcccccccchHHHHHHHHHHHcCCCccCCCChHHHHH
Confidence 999999999998765432211 11123468899999998865 46899999999999999999999999543221000
Q ss_pred --------ccH--------HHHHHHHhcCCCCCccCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCChHHHHH
Q 011360 424 --------CSP--------EWLRKVMNSKNPSRAIDPRLPGNGYEKKMLHVLKIAYICTLHDPEERPNSQYVRC 481 (487)
Q Consensus 424 --------~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~~il~ 481 (487)
... .............. +..+ .......+..+.+++.+||+.+|++|||+.+++.
T Consensus 223 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~-~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~ 293 (334)
T cd07855 223 LILSVLGSPSEEVLNRIGSDRVRKYIQNLPRKQ--PVPW-SKIFPKASPEALDLLSQMLQFDPEERITVEQALQ 293 (334)
T ss_pred HHHHHhCCChhHhhhhhchhhHHHHHhhcccCC--CCCH-HHHcccCCHHHHHHHHHHccCChhhCcCHHHHHh
Confidence 000 00000110000000 0000 0001123567999999999999999999999875
No 345
>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase
Probab=100.00 E-value=1.3e-35 Score=293.71 Aligned_cols=267 Identities=24% Similarity=0.360 Sum_probs=192.7
Q ss_pred cccccccccccccceeEEEEEecCCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCCCCccccc
Q 011360 192 DCFASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQIRHRNILPLL 271 (487)
Q Consensus 192 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~ 271 (487)
++|.+.+.||.|+||.||+|.. ..+|..||+|++... ........+.+|+.+++.++||||++++
T Consensus 5 ~~y~i~~~lg~G~~g~vy~~~~-~~~~~~vaiK~~~~~--------------~~~~~~~~~~~E~~~l~~l~h~niv~~~ 69 (336)
T cd07849 5 PRYQNLSYIGEGAYGMVCSATH-KPTGVKVAIKKISPF--------------EHQTFCQRTLREIKILRRFKHENIIGIL 69 (336)
T ss_pred cceEEEEEEEecCCeEEEEEEE-cCCCCeEEEEEeccc--------------ccchhHHHHHHHHHHHHhCCCCCcCchh
Confidence 4699999999999999999975 467899999987321 1122345567899999999999999999
Q ss_pred eEEecC-----CeeEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeC
Q 011360 272 AHMVRP-----DCHLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVLLN 346 (487)
Q Consensus 272 ~~~~~~-----~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nill~ 346 (487)
+++... ...|++|||+. ++|.+++. ...+++..+..++.|++.||.|| |+.||+||||||+||+++
T Consensus 70 ~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~-----~~~l~~~~~~~i~~ql~~aL~~L---H~~~ivH~dlkp~Nill~ 140 (336)
T cd07849 70 DIIRPPSFESFNDVYIVQELME-TDLYKLIK-----TQHLSNDHIQYFLYQILRGLKYI---HSANVLHRDLKPSNLLLN 140 (336)
T ss_pred heeecccccccceEEEEehhcc-cCHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHH---HhCCeeccCCCHHHEEEC
Confidence 887644 35799999995 58887775 35689999999999999999999 778899999999999999
Q ss_pred CCCCEEEeccCCccccCCCCcee-eEeeecccccccCCcccCC-CCCCchhHHHHHHHHHHHHHhCCCCccccCCCCcc-
Q 011360 347 DDMEACISDLGLAMAIPDGYTRV-LISYVLGTMAYIAPEYFQQ-PELSEKCDIFSFGMLLISLVRGVPSFVFHQNGEEI- 423 (487)
Q Consensus 347 ~~~~~kl~DFg~s~~~~~~~~~~-~~~~~~gt~~y~aPE~l~~-~~~~~~~DvwslG~~l~elltg~~pf~~~~~~~~~- 423 (487)
.++.+||+|||++.......... ......|++.|+|||.+.+ ..++.++||||||+++|+|++|++||.........
T Consensus 141 ~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGvil~el~~G~~~f~~~~~~~~~~ 220 (336)
T cd07849 141 TNCDLKICDFGLARIADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKAIDIWSVGCILAEMLSNRPLFPGKDYLHQLN 220 (336)
T ss_pred CCCCEEECcccceeeccccccccCCcCCcCcCCCccChHHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHH
Confidence 99999999999987654322111 1123468899999998654 56899999999999999999999999543210000
Q ss_pred --------ccHHHHHHHHhcCC--CCCcc--CCCCCC-CCcHHHHHHHHHHHhhccCCCCCCCCChHHHHHH
Q 011360 424 --------CSPEWLRKVMNSKN--PSRAI--DPRLPG-NGYEKKMLHVLKIAYICTLHDPEERPNSQYVRCR 482 (487)
Q Consensus 424 --------~~~~~~~~~~~~~~--~~~~~--~~~~~~-~~~~~~~~~l~~li~~cl~~~P~~RPs~~~il~~ 482 (487)
...+.......... ..... .+..+. ......+..+.+++.+||+.+|++|||+.+++..
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~e~l~h 292 (336)
T cd07849 221 LILGVLGTPSQEDLNCIISLRARNYIKSLPFKPKVPWNKLFPNADPKALDLLDKMLTFNPHKRITVEEALAH 292 (336)
T ss_pred HHHHHcCCCCHHHHHHhhchhhhhHHhhcCcCCcccHHHHhcccCcHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 00000000000000 00000 000000 0011234568899999999999999999998863
No 346
>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3. Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co
Probab=100.00 E-value=8e-35 Score=285.15 Aligned_cols=248 Identities=27% Similarity=0.395 Sum_probs=193.0
Q ss_pred ccccccccccccceeEEEEEecCCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCCCCccccce
Q 011360 193 CFASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQIRHRNILPLLA 272 (487)
Q Consensus 193 ~~~~~~~lg~G~~g~v~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~ 272 (487)
.|...+.||.|+||.||+|+. ..++..|++|++.... .........+..|+.+++.++|||++++++
T Consensus 22 ~~~~~~~lg~g~~g~v~~~~~-~~~~~~v~ik~~~~~~------------~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~ 88 (313)
T cd06633 22 IFVGLHEIGHGSFGAVYFATN-SHTNEVVAVKKMSYSG------------KQTNEKWQDIIKEVKFLQQLKHPNTIEYKG 88 (313)
T ss_pred HhhcceeeccCCCeEEEEEEE-CCCCcEEEEEEEeccc------------cCchHHHHHHHHHHHHHHhCCCCCCccEEE
Confidence 467778899999999999974 4578999999874311 112223456788999999999999999999
Q ss_pred EEecCCeeEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCCEE
Q 011360 273 HMVRPDCHLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVLLNDDMEAC 352 (487)
Q Consensus 273 ~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nill~~~~~~k 352 (487)
++.+.+..|+||||+. |+|.+++.. ....+++..+..++.|++.||.|| |+.|++|+||+|+||+++.++.++
T Consensus 89 ~~~~~~~~~lv~e~~~-~~l~~~l~~---~~~~l~~~~~~~~~~qi~~al~~L---H~~gi~H~dl~p~nili~~~~~~k 161 (313)
T cd06633 89 CYLKEHTAWLVMEYCL-GSASDLLEV---HKKPLQEVEIAAITHGALQGLAYL---HSHNMIHRDIKAGNILLTEPGQVK 161 (313)
T ss_pred EEEeCCEEEEEEecCC-CCHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHH---HHCCeecCCCChhhEEECCCCCEE
Confidence 9999999999999995 578777753 245688999999999999999999 677899999999999999999999
Q ss_pred EeccCCccccCCCCceeeEeeecccccccCCcccC---CCCCCchhHHHHHHHHHHHHHhCCCCccccCCCCccccHHHH
Q 011360 353 ISDLGLAMAIPDGYTRVLISYVLGTMAYIAPEYFQ---QPELSEKCDIFSFGMLLISLVRGVPSFVFHQNGEEICSPEWL 429 (487)
Q Consensus 353 l~DFg~s~~~~~~~~~~~~~~~~gt~~y~aPE~l~---~~~~~~~~DvwslG~~l~elltg~~pf~~~~~~~~~~~~~~~ 429 (487)
|+|||++...... ....|+..|+|||++. ...++.++||||||+++|+|++|..||..... ....
T Consensus 162 L~dfg~~~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~slGvil~el~~g~~p~~~~~~------~~~~ 229 (313)
T cd06633 162 LADFGSASKSSPA------NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNA------MSAL 229 (313)
T ss_pred EeecCCCcccCCC------CCccccccccChhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCh------HHHH
Confidence 9999988643221 2345889999999974 45688999999999999999999999843321 1222
Q ss_pred HHHHhcCCCCCccCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCChHHHHH
Q 011360 430 RKVMNSKNPSRAIDPRLPGNGYEKKMLHVLKIAYICTLHDPEERPNSQYVRC 481 (487)
Q Consensus 430 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~~il~ 481 (487)
........+ .... ...+..+.+++.+||+.+|.+|||+.+++.
T Consensus 230 ~~~~~~~~~-~~~~--------~~~~~~l~~li~~~l~~~P~~Rp~~~~~l~ 272 (313)
T cd06633 230 YHIAQNDSP-TLQS--------NEWTDSFRGFVDYCLQKIPQERPASAELLR 272 (313)
T ss_pred HHHHhcCCC-CCCc--------cccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 222222111 1111 112345889999999999999999999875
No 347
>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul
Probab=100.00 E-value=2.3e-35 Score=292.11 Aligned_cols=261 Identities=24% Similarity=0.352 Sum_probs=192.9
Q ss_pred cccccccccccccceeEEEEEecCCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccC-CCCCcccc
Q 011360 192 DCFASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQI-RHRNILPL 270 (487)
Q Consensus 192 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpnIv~l 270 (487)
++|.+.+.||.|+||.||+|.. ..++..+|+|++... .........+.+|+.+++++ +||||+++
T Consensus 7 ~~y~~~~~lg~g~~~~v~~~~~-~~~~~~~~vK~~~~~-------------~~~~~~~~~~~~E~~~l~~l~~h~ni~~~ 72 (337)
T cd07852 7 RKYEILQKLGKGAYGIVWKAID-RRTKEVVALKKIFDA-------------FRNATDAQRTFREIMFLQELGDHPNIVKL 72 (337)
T ss_pred hHHHHhHhhcCCCCeeEEEEEE-cCCCeEEEEEeeccc-------------cCcchhhhhhhHHHHHHHHhcCCCCccce
Confidence 4689999999999999999975 457889999987320 11122334567799999999 99999999
Q ss_pred ceEEecC--CeeEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCC
Q 011360 271 LAHMVRP--DCHLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVLLNDD 348 (487)
Q Consensus 271 ~~~~~~~--~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nill~~~ 348 (487)
++++... ...|+||||++ ++|..++.. ..+++..+..++.|++.||.|| |+.||+||||+|+||+++.+
T Consensus 73 ~~~~~~~~~~~~~lv~e~~~-~~L~~~~~~-----~~~~~~~~~~i~~qi~~~L~~L---H~~~i~H~dl~p~nill~~~ 143 (337)
T cd07852 73 LNVIKAENDKDIYLVFEYME-TDLHAVIRA-----NILEDVHKRYIMYQLLKALKYI---HSGNVIHRDLKPSNILLNSD 143 (337)
T ss_pred eeeeccCCCceEEEEecccc-cCHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHH---HHCCeecCCCCHHHEEEcCC
Confidence 9988653 46799999996 599888763 2678889999999999999999 67889999999999999999
Q ss_pred CCEEEeccCCccccCCCCce---eeEeeecccccccCCcccCC-CCCCchhHHHHHHHHHHHHHhCCCCccccCCCCccc
Q 011360 349 MEACISDLGLAMAIPDGYTR---VLISYVLGTMAYIAPEYFQQ-PELSEKCDIFSFGMLLISLVRGVPSFVFHQNGEEIC 424 (487)
Q Consensus 349 ~~~kl~DFg~s~~~~~~~~~---~~~~~~~gt~~y~aPE~l~~-~~~~~~~DvwslG~~l~elltg~~pf~~~~~~~~~~ 424 (487)
+.+||+|||++......... .......|+..|+|||.+.+ ..++.++||||||+++|+|+||+.||.......
T Consensus 144 ~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~el~tg~~pf~~~~~~~--- 220 (337)
T cd07852 144 CRVKLADFGLARSLSELEENPENPVLTDYVATRWYRAPEILLGSTRYTKGVDMWSVGCILGEMLLGKPLFPGTSTLN--- 220 (337)
T ss_pred CcEEEeeccchhccccccccccCcchhcccccccccCceeeeccccccccchHHHHHHHHHHHHhCCCCCCCCChHH---
Confidence 99999999999866443221 12234568999999998764 467899999999999999999999995432211
Q ss_pred cHHHHHHHHhcC-C-------------CCCccC------CCCCCCCcHHHHHHHHHHHhhccCCCCCCCCChHHHHH
Q 011360 425 SPEWLRKVMNSK-N-------------PSRAID------PRLPGNGYEKKMLHVLKIAYICTLHDPEERPNSQYVRC 481 (487)
Q Consensus 425 ~~~~~~~~~~~~-~-------------~~~~~~------~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~~il~ 481 (487)
......... . ....++ ...........+.++.+++.+||+.+|++|||+.+++.
T Consensus 221 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~Rps~~~il~ 294 (337)
T cd07852 221 ---QLEKIIEVIGPPSAEDIESIKSPFAATMLDSLPSRPRKPLDELLPKASDDALDLLKKLLVFNPNKRLTAEEALE 294 (337)
T ss_pred ---HHHHHHHHhCCCCHHHHHHHHhhhHHHhhhhcccccccchhhhccCCCHHHHHHHHHhccCCcccccCHHHHhh
Confidence 001100000 0 000000 00000011113467899999999999999999999985
No 348
>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]
Probab=100.00 E-value=2e-37 Score=275.46 Aligned_cols=259 Identities=22% Similarity=0.340 Sum_probs=202.0
Q ss_pred cccccccccccccceeEEEEEecCCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHh-ccCCCCCcccc
Q 011360 192 DCFASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITA-SQIRHRNILPL 270 (487)
Q Consensus 192 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l-~~l~hpnIv~l 270 (487)
++.+-+..||.|+||+|++-.+ +.+|+..|||++... .......+++.|.+.. +.-++||||++
T Consensus 64 ~~Lqdlg~iG~G~fG~V~KM~h-k~sg~~mAVKrIr~~--------------n~~keq~rll~e~d~~mks~~cp~IVkf 128 (361)
T KOG1006|consen 64 DNLQDLGEIGNGAFGTVNKMLH-KPSGKLMAVKRIRSN--------------NIEKEQKRLLMEHDTVMKSSNCPNIVKF 128 (361)
T ss_pred chHHHHHHhcCCcchhhhhhhc-CccCcEEEEEEeeec--------------cchHHHHHHHHHHHHHHhhcCCcHHHHH
Confidence 4466778899999999999975 468999999998542 1234556777777654 44589999999
Q ss_pred ceEEecCCeeEEEEEecCCCCHHHHHhh-hhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCC
Q 011360 271 LAHMVRPDCHLLVYEFMKNGSLQDILDD-VSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVLLNDDM 349 (487)
Q Consensus 271 ~~~~~~~~~~~lv~E~~~~gsL~~~l~~-~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nill~~~~ 349 (487)
||....++..+|.||.| ..||..+... +.-....+++...-.+....+.||.||...| .|||||+||+|||++..|
T Consensus 129 yGa~F~EGdcWiCMELM-d~SlDklYk~vy~vq~~~ipE~Ilg~ItvatV~AL~yLK~~l--kiIHRDvKPSNILldr~G 205 (361)
T KOG1006|consen 129 YGALFSEGDCWICMELM-DISLDKLYKRVYSVQKSRIPENILGHITVATVDALDYLKEEL--KIIHRDVKPSNILLDRHG 205 (361)
T ss_pred hhhhhcCCceeeeHHHH-hhhHHHHHHHHHHHHhccCcHhhhhheeeeehhHHHHHHHHh--hhhhccCChhheEEecCC
Confidence 99999999999999999 6688776543 2234567888888899999999999997544 599999999999999999
Q ss_pred CEEEeccCCccccCCCCceeeEeeecccccccCCcccCC--CCCCchhHHHHHHHHHHHHHhCCCCccccCCCCccccHH
Q 011360 350 EACISDLGLAMAIPDGYTRVLISYVLGTMAYIAPEYFQQ--PELSEKCDIFSFGMLLISLVRGVPSFVFHQNGEEICSPE 427 (487)
Q Consensus 350 ~~kl~DFg~s~~~~~~~~~~~~~~~~gt~~y~aPE~l~~--~~~~~~~DvwslG~~l~elltg~~pf~~~~~~~~~~~~~ 427 (487)
.+||||||++-.+..+... +.-.|...|||||.+.. ..|+.+|||||||++|||+.||..||...+ ...+
T Consensus 206 ~vKLCDFGIcGqLv~SiAk---T~daGCrpYmAPERi~p~~~gyDiRSDvWSLGITL~EvAtG~fPyr~w~-----svfe 277 (361)
T KOG1006|consen 206 DVKLCDFGICGQLVDSIAK---TVDAGCRPYMAPERIDPSDKGYDIRSDVWSLGITLYEVATGNFPYRKWD-----SVFE 277 (361)
T ss_pred CEeeecccchHhHHHHHHh---hhccCCccccChhccCCccCCcchhhhhhhhcceEeeeecCCCCcchHH-----HHHH
Confidence 9999999999776544332 34568999999998863 369999999999999999999999994432 2344
Q ss_pred HHHHHHhcCCCCCccCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCChHHHHH
Q 011360 428 WLRKVMNSKNPSRAIDPRLPGNGYEKKMLHVLKIAYICTLHDPEERPNSQYVRC 481 (487)
Q Consensus 428 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~~il~ 481 (487)
.+..++.+..|.-..+ ....+.+..+...+.-|+.+|-+.||...++++
T Consensus 278 ql~~Vv~gdpp~l~~~-----~~~~~~s~~~~~fintCl~Kd~~~Rpky~~Lk~ 326 (361)
T KOG1006|consen 278 QLCQVVIGDPPILLFD-----KECVHYSFSMVRFINTCLIKDRSDRPKYDDLKK 326 (361)
T ss_pred HHHHHHcCCCCeecCc-----ccccccCHHHHHHHHHHhhcccccCcchhhhhc
Confidence 5555555444432222 222345567889999999999999999998875
No 349
>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check
Probab=100.00 E-value=3.8e-35 Score=279.53 Aligned_cols=256 Identities=20% Similarity=0.303 Sum_probs=196.5
Q ss_pred ccccccccccccceeEEEEEecCCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCCCCccccce
Q 011360 193 CFASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQIRHRNILPLLA 272 (487)
Q Consensus 193 ~~~~~~~lg~G~~g~v~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~ 272 (487)
+|.+.+.||.|+||.||++... ..+..+++|.+..... ..........+..|+.+++.++||||+++++
T Consensus 1 ~y~i~~~ig~g~~g~v~~~~~~-~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~ 69 (260)
T cd08222 1 RYILQQRLGKGSFGTVYLVKDK-KAVAEERLKVLKEIPV----------GELNPNETVQANQEAQLLSKLDHPAIVKFHA 69 (260)
T ss_pred CceeeeeecCCCCceEEEEEec-CCCCcceEEEeccccc----------cccCcchHHHHHHHHHHHHhCCCCcHHHHHH
Confidence 3778899999999999999754 3445566665422100 0111223345667889999999999999999
Q ss_pred EEecCCeeEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCCEE
Q 011360 273 HMVRPDCHLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVLLNDDMEAC 352 (487)
Q Consensus 273 ~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nill~~~~~~k 352 (487)
++.+....++||||+++++|.+++.........+++..+..++.|++.||.|| |+.|++|+||+|+||+++. +.++
T Consensus 70 ~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~l---H~~~i~h~~l~~~nili~~-~~~~ 145 (260)
T cd08222 70 SFLERDAFCIITEYCEGRDLDCKLEELKHTGKTLSENQVCEWFIQLLLGVHYM---HQRRILHRDLKAKNIFLKN-NLLK 145 (260)
T ss_pred HHhcCCceEEEEEeCCCCCHHHHHHHHhhcccccCHHHHHHHHHHHHHHHHHH---HHcCccccCCChhheEeec-CCEe
Confidence 99999999999999999999999876555567899999999999999999999 7789999999999999975 5799
Q ss_pred EeccCCccccCCCCceeeEeeecccccccCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCccccCCCCccccHHHHHHH
Q 011360 353 ISDLGLAMAIPDGYTRVLISYVLGTMAYIAPEYFQQPELSEKCDIFSFGMLLISLVRGVPSFVFHQNGEEICSPEWLRKV 432 (487)
Q Consensus 353 l~DFg~s~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DvwslG~~l~elltg~~pf~~~~~~~~~~~~~~~~~~ 432 (487)
|+|||.+......... .....|++.|+|||.+.+..++.++|+||||+++|+|++|..||.... ........
T Consensus 146 l~d~g~~~~~~~~~~~--~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~~~~~~~~~~------~~~~~~~~ 217 (260)
T cd08222 146 IGDFGVSRLLMGSCDL--ATTFTGTPYYMSPEALKHQGYDSKSDIWSLGCILYEMCCLAHAFEGQN------FLSVVLRI 217 (260)
T ss_pred ecccCceeecCCCccc--ccCCCCCcCccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCcc------HHHHHHHH
Confidence 9999998765433221 123457889999999988888999999999999999999999994221 12222222
Q ss_pred HhcCCCCCccCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCChHHHHH
Q 011360 433 MNSKNPSRAIDPRLPGNGYEKKMLHVLKIAYICTLHDPEERPNSQYVRC 481 (487)
Q Consensus 433 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~~il~ 481 (487)
.....+ ..+ ...+.++.+++.+||..+|++||++.++++
T Consensus 218 ~~~~~~------~~~----~~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 256 (260)
T cd08222 218 VEGPTP------SLP----ETYSRQLNSIMQSMLNKDPSLRPSAAEILR 256 (260)
T ss_pred HcCCCC------CCc----chhcHHHHHHHHHHhcCChhhCcCHHHHhh
Confidence 222111 111 233456889999999999999999999875
No 350
>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati
Probab=100.00 E-value=1.5e-35 Score=293.39 Aligned_cols=264 Identities=23% Similarity=0.336 Sum_probs=193.9
Q ss_pred cccccccccccccceeEEEEEecCCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCCCCccccc
Q 011360 192 DCFASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQIRHRNILPLL 271 (487)
Q Consensus 192 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~ 271 (487)
+.|.+.+.||.|+||.||++.. ..++..||||.+... .........+.+|+.+++.++||||++++
T Consensus 5 ~~y~~~~~lg~G~~~~vy~~~~-~~~~~~vaiK~~~~~-------------~~~~~~~~~~~~E~~~l~~l~h~ni~~~~ 70 (337)
T cd07858 5 TKYVPIKPIGRGAYGIVCSAKN-SETNEKVAIKKIANA-------------FDNRIDAKRTLREIKLLRHLDHENVIAIK 70 (337)
T ss_pred cceeEEEEeccCCCeEEEEEEe-cCCCCeEEEEEeccc-------------ccccchhHHHHHHHHHHHhcCCCCccchH
Confidence 4689999999999999999974 468899999987321 11122334566899999999999999999
Q ss_pred eEEecC-----CeeEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeC
Q 011360 272 AHMVRP-----DCHLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVLLN 346 (487)
Q Consensus 272 ~~~~~~-----~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nill~ 346 (487)
+++... ...|++|||+. ++|.+++.. ...+++..+..++.|++.||.|| |++|++||||||+||+++
T Consensus 71 ~~~~~~~~~~~~~~~lv~e~~~-~~L~~~~~~----~~~l~~~~~~~i~~qi~~aL~~L---H~~~i~H~dlkp~Nil~~ 142 (337)
T cd07858 71 DIMPPPHREAFNDVYIVYELMD-TDLHQIIRS----SQTLSDDHCQYFLYQLLRGLKYI---HSANVLHRDLKPSNLLLN 142 (337)
T ss_pred HheecccccccCcEEEEEeCCC-CCHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHH---HhCCEecCCCCHHHEEEc
Confidence 987654 34799999995 689888754 45689999999999999999999 677899999999999999
Q ss_pred CCCCEEEeccCCccccCCCCceeeEeeecccccccCCcccCC-CCCCchhHHHHHHHHHHHHHhCCCCccccCCCCccc-
Q 011360 347 DDMEACISDLGLAMAIPDGYTRVLISYVLGTMAYIAPEYFQQ-PELSEKCDIFSFGMLLISLVRGVPSFVFHQNGEEIC- 424 (487)
Q Consensus 347 ~~~~~kl~DFg~s~~~~~~~~~~~~~~~~gt~~y~aPE~l~~-~~~~~~~DvwslG~~l~elltg~~pf~~~~~~~~~~- 424 (487)
.++.+||+|||++........ ......++..|+|||.+.. ..++.++||||||+++|+|++|.+||..........
T Consensus 143 ~~~~~kL~Dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~ 220 (337)
T cd07858 143 ANCDLKICDFGLARTTSEKGD--FMTEYVVTRWYRAPELLLNCSEYTTAIDVWSVGCIFAELLGRKPLFPGKDYVHQLKL 220 (337)
T ss_pred CCCCEEECcCccccccCCCcc--cccccccccCccChHHHhcCCCCCCcccHHHHHHHHHHHHcCCCCCCCCChHHHHHH
Confidence 999999999999986644321 1133457889999998765 468999999999999999999999995432100000
Q ss_pred --------cH--------HHHHHHHhcCCCCCccCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCChHHHHHH
Q 011360 425 --------SP--------EWLRKVMNSKNPSRAIDPRLPGNGYEKKMLHVLKIAYICTLHDPEERPNSQYVRCR 482 (487)
Q Consensus 425 --------~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~~il~~ 482 (487)
.. .......... ....++... ......+..+.+++.+||+.+|++|||++++++.
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~-~~~~~~~~~~~~li~~~l~~~P~~Rps~~ell~h 291 (337)
T cd07858 221 ITELLGSPSEEDLGFIRNEKARRYIRSL--PYTPRQSFA-RLFPHANPLAIDLLEKMLVFDPSKRITVEEALAH 291 (337)
T ss_pred HHHHhCCCChHHhhhcCchhhhHHHHhc--CcccccCHH-HHcccCCHHHHHHHHHHhcCChhhccCHHHHHcC
Confidence 00 0000000000 000000000 0111234668899999999999999999998864
No 351
>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.6e-35 Score=311.93 Aligned_cols=269 Identities=23% Similarity=0.303 Sum_probs=208.9
Q ss_pred HHhhhccccccccccccccceeEEEEEecCCC------CceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHh
Q 011360 186 AFLKKEDCFASLEKIGSGGCGEVYKAELPGSN------GKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITA 259 (487)
Q Consensus 186 ~~~~~~~~~~~~~~lg~G~~g~v~~~~~~~~~------~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l 259 (487)
.|....++..+.+.||.|.||.|++|...... ...||||.+.. .......+.+..|+.+|
T Consensus 290 ~~e~~~~~l~~~~~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~--------------~~~~~~~~~~~~El~~m 355 (609)
T KOG0200|consen 290 KWEIPRENLKLGKYLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKE--------------NASSSEKKDLMSELNVL 355 (609)
T ss_pred ceeechhhccccceeecccccceEeEEEeecccccccceEEEEEEeccc--------------ccCcHHHHHHHHHHHHH
Confidence 45555555677789999999999999854222 46799998743 12225667889999999
Q ss_pred ccC-CCCCccccceEEecCCeeEEEEEecCCCCHHHHHhhhh---c---CC------CCCChHHHHHHHHHHHHHHHHHH
Q 011360 260 SQI-RHRNILPLLAHMVRPDCHLLVYEFMKNGSLQDILDDVS---R---GR------RELDWPSRHRIALGVASGLEYLH 326 (487)
Q Consensus 260 ~~l-~hpnIv~l~~~~~~~~~~~lv~E~~~~gsL~~~l~~~~---~---~~------~~l~~~~~~~i~~qi~~~L~~Lh 326 (487)
..+ .||||+.++|++...+.+++|+||+..|+|.+++...+ . .+ ..++....+.++.||+.|++||
T Consensus 356 ~~~g~H~niv~llG~~t~~~~~~~v~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~QIa~GMe~L- 434 (609)
T KOG0200|consen 356 KELGKHPNIVNLLGACTQDGPLYVIVEYAEHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAYQIANGMEYL- 434 (609)
T ss_pred HHhcCCcchhhheeeeccCCceEEEEEeccCCcHHHHHHhccccccccccCCCccccCCcCHHHHHHHHHHHHHHHHHH-
Confidence 999 79999999999999999999999999999999998644 0 00 2488899999999999999999
Q ss_pred hcCCCCeeecCCCCCCEEeCCCCCEEEeccCCccccCCCCceeeE-eeecccccccCCcccCCCCCCchhHHHHHHHHHH
Q 011360 327 MYHSASIIHGDIKPRNVLLNDDMEACISDLGLAMAIPDGYTRVLI-SYVLGTMAYIAPEYFQQPELSEKCDIFSFGMLLI 405 (487)
Q Consensus 327 ~~h~~givH~Dlkp~Nill~~~~~~kl~DFg~s~~~~~~~~~~~~-~~~~gt~~y~aPE~l~~~~~~~~~DvwslG~~l~ 405 (487)
.+..+|||||.++|||++.+..+||+|||+++........... +...-+..|||||.+....|+.+|||||||++||
T Consensus 435 --~~~~~vHRDLAaRNVLi~~~~~~kIaDFGlar~~~~~~~y~~~~~~~~LP~kWmApEsl~~~~ft~kSDVWSfGI~L~ 512 (609)
T KOG0200|consen 435 --ASVPCVHRDLAARNVLITKNKVIKIADFGLARDHYNKDYYRTKSSAGTLPVKWMAPESLFDRVFTSKSDVWSFGILLW 512 (609)
T ss_pred --hhCCccchhhhhhhEEecCCCEEEEccccceeccCCCCceEecCCCCccceeecCHHHhccCcccccchhhHHHHHHH
Confidence 6777999999999999999999999999999976554333211 1111366799999999999999999999999999
Q ss_pred HHHh-CCCCccccCCCCccccHHHHHHHHhcCCCCCccCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCChHHHHHHHh
Q 011360 406 SLVR-GVPSFVFHQNGEEICSPEWLRKVMNSKNPSRAIDPRLPGNGYEKKMLHVLKIAYICTLHDPEERPNSQYVRCRLS 484 (487)
Q Consensus 406 ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~~il~~L~ 484 (487)
|++| |..||.+-.. ..+....+..+.+.. .|.. ...+++++|..||+.+|++||++.++.+.++
T Consensus 513 EifsLG~~PYp~~~~-----~~~l~~~l~~G~r~~------~P~~----c~~eiY~iM~~CW~~~p~~RP~F~~~~~~~~ 577 (609)
T KOG0200|consen 513 EIFTLGGTPYPGIPP-----TEELLEFLKEGNRME------QPEH----CSDEIYDLMKSCWNADPEDRPTFSECVEFFE 577 (609)
T ss_pred HHhhCCCCCCCCCCc-----HHHHHHHHhcCCCCC------CCCC----CCHHHHHHHHHHhCCCcccCCCHHHHHHHHH
Confidence 9999 6999944111 222322222222221 1212 2356889999999999999999999999998
Q ss_pred hh
Q 011360 485 QL 486 (487)
Q Consensus 485 ~l 486 (487)
..
T Consensus 578 ~~ 579 (609)
T KOG0200|consen 578 KH 579 (609)
T ss_pred HH
Confidence 64
No 352
>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=6e-36 Score=280.51 Aligned_cols=245 Identities=24% Similarity=0.300 Sum_probs=198.9
Q ss_pred cccccccccccccceeEEEEEecCCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccC-CCCCcccc
Q 011360 192 DCFASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQI-RHRNILPL 270 (487)
Q Consensus 192 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpnIv~l 270 (487)
.+|..+.+||.|+||+|-+|. ++.+.+.+|||++.... ......++.-+.|-.+|+.. +-|.++.+
T Consensus 349 tDFnFl~VlGKGSFGKVlLae-rkgtdELyAiKiLkKDV------------iiQdDDvectm~EKrvLAL~~kppFL~ql 415 (683)
T KOG0696|consen 349 TDFNFLMVLGKGSFGKVLLAE-RKGTDELYAIKILKKDV------------IIQDDDVECTMVEKRVLALPGKPPFLVQL 415 (683)
T ss_pred cccceEEEeccCccceeeeec-ccCcchhhhhhhhccce------------eeecCcccceehhhhheecCCCCchHHHH
Confidence 358999999999999999996 55678899999875432 22333445556677777766 67899999
Q ss_pred ceEEecCCeeEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCC
Q 011360 271 LAHMVRPDCHLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVLLNDDME 350 (487)
Q Consensus 271 ~~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nill~~~~~ 350 (487)
..+|.+-+.+|+||||+.||+|-..++.+ +.+.+..+..++..|+-||-+| |++||++||||.+||+++.+|+
T Consensus 416 HScFQTmDRLyFVMEyvnGGDLMyhiQQ~----GkFKEp~AvFYAaEiaigLFFL---h~kgIiYRDLKLDNvmLd~eGH 488 (683)
T KOG0696|consen 416 HSCFQTMDRLYFVMEYVNGGDLMYHIQQV----GKFKEPVAVFYAAEIAIGLFFL---HSKGIIYRDLKLDNVMLDSEGH 488 (683)
T ss_pred HHHhhhhhheeeEEEEecCchhhhHHHHh----cccCCchhhhhhHHHHHHhhhh---hcCCeeeeeccccceEeccCCc
Confidence 99999999999999999999999999864 5577888899999999999999 8999999999999999999999
Q ss_pred EEEeccCCccccCCCCceeeEeeecccccccCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCccccCCCCccccHHHHH
Q 011360 351 ACISDLGLAMAIPDGYTRVLISYVLGTMAYIAPEYFQQPELSEKCDIFSFGMLLISLVRGVPSFVFHQNGEEICSPEWLR 430 (487)
Q Consensus 351 ~kl~DFg~s~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DvwslG~~l~elltg~~pf~~~~~~~~~~~~~~~~ 430 (487)
+||+|||+++.---+ .....+++|||.|+|||++...+|+.++|+||||++||||+.|++||.+.+ ..+...
T Consensus 489 iKi~DFGmcKEni~~--~~TTkTFCGTPdYiAPEIi~YqPYgksvDWWa~GVLLyEmlaGQpPFdGeD------E~elF~ 560 (683)
T KOG0696|consen 489 IKIADFGMCKENIFD--GVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGED------EDELFQ 560 (683)
T ss_pred eEeeecccccccccC--CcceeeecCCCcccccceEEecccccchhHHHHHHHHHHHHcCCCCCCCCC------HHHHHH
Confidence 999999999764322 223467899999999999999999999999999999999999999995433 234455
Q ss_pred HHHhcCCCCCccCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCC
Q 011360 431 KVMNSKNPSRAIDPRLPGNGYEKKMLHVLKIAYICTLHDPEERPN 475 (487)
Q Consensus 431 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs 475 (487)
.++..+.. . ....+.+...+....|.+.|.+|..
T Consensus 561 aI~ehnvs-------y----PKslSkEAv~ickg~ltK~P~kRLG 594 (683)
T KOG0696|consen 561 AIMEHNVS-------Y----PKSLSKEAVAICKGLLTKHPGKRLG 594 (683)
T ss_pred HHHHccCc-------C----cccccHHHHHHHHHHhhcCCccccC
Confidence 55443321 1 1223456778888899999999953
No 353
>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po
Probab=100.00 E-value=3.3e-35 Score=283.85 Aligned_cols=259 Identities=25% Similarity=0.373 Sum_probs=194.3
Q ss_pred cccccccccccceeEEEEEecCCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCCCCccccceE
Q 011360 194 FASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQIRHRNILPLLAH 273 (487)
Q Consensus 194 ~~~~~~lg~G~~g~v~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~ 273 (487)
|.+.+.||.|++|.||+|.. ..++..+|+|++.... ........+.+|+.+++.++|||+++++++
T Consensus 1 y~~~~~l~~g~~~~vy~~~~-~~~~~~~~~K~~~~~~-------------~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~ 66 (287)
T cd07840 1 YEKIAQIGEGTYGQVYKARN-KKTGELVALKKIRMEN-------------EKEGFPITAIREIKLLQKLRHPNIVRLKEI 66 (287)
T ss_pred CeeeEEeccCCCeEEEEEEE-CCCCeEEEEEEEeccc-------------ccccchHHHHHHHHHHHhccCCCeeeheee
Confidence 56788999999999999975 4568899999985311 122234567789999999999999999999
Q ss_pred EecC--CeeEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCCE
Q 011360 274 MVRP--DCHLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVLLNDDMEA 351 (487)
Q Consensus 274 ~~~~--~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nill~~~~~~ 351 (487)
+... +..++||||+++ +|.+++.. ....+++..++.++.|++.||+|| |+.|++|+||+|+||++++++.+
T Consensus 67 ~~~~~~~~~~lv~e~~~~-~l~~~~~~---~~~~~~~~~~~~i~~~i~~al~~L---H~~~~~h~dl~p~nil~~~~~~~ 139 (287)
T cd07840 67 VTSKGKGSIYMVFEYMDH-DLTGLLDS---PEVKFTESQIKCYMKQLLEGLQYL---HSNGILHRDIKGSNILINNDGVL 139 (287)
T ss_pred EecCCCCcEEEEeccccc-cHHHHHhc---cCCCCCHHHHHHHHHHHHHHHHHH---HHCCceeccCcHHHeEEcCCCCE
Confidence 9888 889999999964 88888753 235789999999999999999999 67789999999999999999999
Q ss_pred EEeccCCccccCCCCceeeEeeecccccccCCcccCC-CCCCchhHHHHHHHHHHHHHhCCCCccccCCCCccccHHHHH
Q 011360 352 CISDLGLAMAIPDGYTRVLISYVLGTMAYIAPEYFQQ-PELSEKCDIFSFGMLLISLVRGVPSFVFHQNGEEICSPEWLR 430 (487)
Q Consensus 352 kl~DFg~s~~~~~~~~~~~~~~~~gt~~y~aPE~l~~-~~~~~~~DvwslG~~l~elltg~~pf~~~~~~~~~~~~~~~~ 430 (487)
+|+|||++......... ......++..|+|||.+.+ ..++.++||||||+++|+|+||..||..... .....
T Consensus 140 ~l~d~g~~~~~~~~~~~-~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~t~~~p~~~~~~------~~~~~ 212 (287)
T cd07840 140 KLADFGLARPYTKRNSA-DYTNRVITLWYRPPELLLGATRYGPEVDMWSVGCILAELFLGKPIFQGSTE------LEQLE 212 (287)
T ss_pred EEccccceeeccCCCcc-cccccccccccCCceeeEccccCChHHHHHHHHHHHHHHHhCCCCCCCCCh------HHHHH
Confidence 99999999876544321 1123446788999997764 4678999999999999999999999943321 11111
Q ss_pred HHHhc---CC-----------------CCCccCCCCCCCCcHH-HHHHHHHHHhhccCCCCCCCCChHHHHH
Q 011360 431 KVMNS---KN-----------------PSRAIDPRLPGNGYEK-KMLHVLKIAYICTLHDPEERPNSQYVRC 481 (487)
Q Consensus 431 ~~~~~---~~-----------------~~~~~~~~~~~~~~~~-~~~~l~~li~~cl~~~P~~RPs~~~il~ 481 (487)
..... .. +.......+. ..... .+..+.+++.+||+.+|.+|||+++++.
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~ 283 (287)
T cd07840 213 KIFELCGSPTDENWPGVSKLPWFENLKPKKPYKRRLR-EFFKHLIDPSALDLLDKLLTLDPKKRISADQALQ 283 (287)
T ss_pred HHHHHhCCCchhhccccccchhhhhccccccchhHHH-HHhcccCCHHHHHHHHHHcCCChhhCcCHHHHhh
Confidence 11110 00 0000000000 00011 2567899999999999999999999875
No 354
>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co
Probab=100.00 E-value=9e-35 Score=279.94 Aligned_cols=248 Identities=25% Similarity=0.319 Sum_probs=185.3
Q ss_pred ccccccceeEEEEEecCCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCCCCccccceEEecCC
Q 011360 199 KIGSGGCGEVYKAELPGSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQIRHRNILPLLAHMVRPD 278 (487)
Q Consensus 199 ~lg~G~~g~v~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~ 278 (487)
.||.|+||.||++.. ..+++.||+|.+........ ...............++...||||+.+++++...+
T Consensus 1 ~ig~g~~g~Vy~~~~-~~~~~~vaiK~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 70 (278)
T cd05606 1 IIGRGGFGEVYGCRK-ADTGKMYAMKCLDKKRIKMK---------QGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPD 70 (278)
T ss_pred CcccCCCeEEEEEEE-ecCCCEEEEEEeeccccccc---------hhHHHHHHHHHHHHHHHhCCCCcEeeeeeeeecCC
Confidence 489999999999964 45788999998743110000 00000111122234455568999999999999999
Q ss_pred eeEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCCEEEeccCC
Q 011360 279 CHLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVLLNDDMEACISDLGL 358 (487)
Q Consensus 279 ~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nill~~~~~~kl~DFg~ 358 (487)
..++||||+.||+|.+++.. ...+++..+..++.|++.||.|| |+.+++||||+|+||+++.++.++|+|||+
T Consensus 71 ~~~~v~e~~~g~~L~~~l~~----~~~l~~~~~~~~~~ql~~~l~~l---H~~~i~H~di~p~nili~~~~~~kl~dfg~ 143 (278)
T cd05606 71 KLSFILDLMNGGDLHYHLSQ----HGVFSEAEMRFYAAEIILGLEHM---HNRFVVYRDLKPANILLDEHGHVRISDLGL 143 (278)
T ss_pred EEEEEEecCCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHH---HHCCEEcCCCCHHHEEECCCCCEEEccCcC
Confidence 99999999999999988864 45789999999999999999999 678899999999999999999999999999
Q ss_pred ccccCCCCceeeEeeecccccccCCcccCCC-CCCchhHHHHHHHHHHHHHhCCCCccccCCCCccccHHHHHHHHhcCC
Q 011360 359 AMAIPDGYTRVLISYVLGTMAYIAPEYFQQP-ELSEKCDIFSFGMLLISLVRGVPSFVFHQNGEEICSPEWLRKVMNSKN 437 (487)
Q Consensus 359 s~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~-~~~~~~DvwslG~~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~ 437 (487)
+........ ....|+..|+|||.+.++ .++.++||||+|+++|+|++|..||........ ..........
T Consensus 144 ~~~~~~~~~----~~~~~~~~y~aPE~~~~~~~~~~~~Di~s~G~~l~~l~~g~~p~~~~~~~~~----~~~~~~~~~~- 214 (278)
T cd05606 144 ACDFSKKKP----HASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDK----HEIDRMTLTM- 214 (278)
T ss_pred ccccCccCC----cCcCCCcCCcCcHHhcCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCccch----HHHHHHhhcc-
Confidence 876543222 234689999999998754 689999999999999999999999954422111 1111111111
Q ss_pred CCCccCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCC-----ChHHHHH
Q 011360 438 PSRAIDPRLPGNGYEKKMLHVLKIAYICTLHDPEERP-----NSQYVRC 481 (487)
Q Consensus 438 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RP-----s~~~il~ 481 (487)
+..++.. .+.++.+++.+||..+|.+|| ++.++++
T Consensus 215 -----~~~~~~~----~s~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~ 254 (278)
T cd05606 215 -----AVELPDS----FSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKE 254 (278)
T ss_pred -----CCCCCCc----CCHHHHHHHHHHhhcCHHhccCCCCCCHHHHHh
Confidence 1112221 235688999999999999999 9999875
No 355
>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They
Probab=100.00 E-value=5.8e-35 Score=281.59 Aligned_cols=259 Identities=26% Similarity=0.352 Sum_probs=196.6
Q ss_pred cccccccccccceeEEEEEecCCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCCCCccccceE
Q 011360 194 FASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQIRHRNILPLLAH 273 (487)
Q Consensus 194 ~~~~~~lg~G~~g~v~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~ 273 (487)
|.+.+.||.|++|.||++.. ..++..+++|.+... .........+.+|+.+++.++||||++++++
T Consensus 1 y~~~~~i~~g~~~~v~~~~~-~~~~~~~~ik~~~~~-------------~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~ 66 (283)
T cd05118 1 YQKLGKIGEGTYGVVYKARD-KLTGEIVAIKKIKLR-------------FESEGIPKTALREIKLLKELNHPNIIKLLDV 66 (283)
T ss_pred CccceeeecCCCceEEEEEc-CCCCcEEEEEEeccc-------------cccchhHHHHHHHHHHHHHhcCCCcchHHHh
Confidence 56778999999999999975 457899999987331 1122344577789999999999999999999
Q ss_pred EecCCeeEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCCEEE
Q 011360 274 MVRPDCHLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVLLNDDMEACI 353 (487)
Q Consensus 274 ~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nill~~~~~~kl 353 (487)
+..++..++||||+++ +|.+++.. ....+++..+..++.|++.||.|| |+.|++|+||+|+||+++.++.++|
T Consensus 67 ~~~~~~~~~v~e~~~~-~l~~~l~~---~~~~~~~~~~~~~~~~i~~~l~~L---H~~~i~H~dl~p~nili~~~~~~~l 139 (283)
T cd05118 67 FRHKGDLYLVFEFMDT-DLYKLIKD---RQRGLPESLIKSYLYQLLQGLAFC---HSHGILHRDLKPENLLINTEGVLKL 139 (283)
T ss_pred hccCCCEEEEEeccCC-CHHHHHHh---hcccCCHHHHHHHHHHHHHHHHHH---HHCCeeecCcCHHHEEECCCCcEEE
Confidence 9999999999999965 88888764 235789999999999999999999 6778999999999999999999999
Q ss_pred eccCCccccCCCCceeeEeeecccccccCCcccCCC-CCCchhHHHHHHHHHHHHHhCCCCccccCCCCccccHHHHHHH
Q 011360 354 SDLGLAMAIPDGYTRVLISYVLGTMAYIAPEYFQQP-ELSEKCDIFSFGMLLISLVRGVPSFVFHQNGEEICSPEWLRKV 432 (487)
Q Consensus 354 ~DFg~s~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~-~~~~~~DvwslG~~l~elltg~~pf~~~~~~~~~~~~~~~~~~ 432 (487)
+|||.+........ ......++..|+|||.+.+. .++.++|+||||+++|+|+||+.||....... .....
T Consensus 140 ~df~~~~~~~~~~~--~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~------~~~~~ 211 (283)
T cd05118 140 ADFGLARSFGSPVR--PYTHYVVTRWYRAPELLLGDKGYSTPVDIWSVGCIFAELLSRRPLFPGKSEID------QLFKI 211 (283)
T ss_pred eeeeeeEecCCCcc--cccCccCcccccCcHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHH------HHHHH
Confidence 99999877654431 11234578899999998776 78999999999999999999999995433211 01000
Q ss_pred Hh-cCCCCCccC-----------CCCC-------CCCcHHHHHHHHHHHhhccCCCCCCCCChHHHHH
Q 011360 433 MN-SKNPSRAID-----------PRLP-------GNGYEKKMLHVLKIAYICTLHDPEERPNSQYVRC 481 (487)
Q Consensus 433 ~~-~~~~~~~~~-----------~~~~-------~~~~~~~~~~l~~li~~cl~~~P~~RPs~~~il~ 481 (487)
.. .+.+....- ...+ .......+.++.+++.+||+.+|.+||++++++.
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~ll~ 279 (283)
T cd05118 212 FRTLGTPDPEVWPKFTSLARNYKFSFPKKAGMPLPKLFPNASPQALDLLSQMLHYDPHKRITAEQALA 279 (283)
T ss_pred HHHcCCCchHhcccchhhhhhhhhhhccccccCHHHhhhhhCHHHHHHHHHHhccCcccCcCHHHHhh
Confidence 00 000000000 0000 0112234567999999999999999999999875
No 356
>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]
Probab=100.00 E-value=3.8e-36 Score=272.76 Aligned_cols=270 Identities=24% Similarity=0.331 Sum_probs=199.7
Q ss_pred cccccccccccccceeEEEEEecCCC---CceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCCCCcc
Q 011360 192 DCFASLEKIGSGGCGEVYKAELPGSN---GKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQIRHRNIL 268 (487)
Q Consensus 192 ~~~~~~~~lg~G~~g~v~~~~~~~~~---~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv 268 (487)
..|+.+..||+|++|.||+|.-...+ .+.+|||++.. ............+|+.+++.++||||+
T Consensus 24 ~~ye~ig~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~-------------~kd~tGiS~SAcREiaL~REl~h~nvi 90 (438)
T KOG0666|consen 24 FEYEGIGKIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKG-------------EKDGTGISMSACREIALLRELKHPNVI 90 (438)
T ss_pred HHhhccceecccccceeeEeeeccCCcccchhhHHHHHhc-------------cCCCCCcCHHHHHHHHHHHHhcCCcch
Confidence 35899999999999999999533222 23689997732 111223344567899999999999999
Q ss_pred ccceEEec-CCeeEEEEEecCCCCHHHHHhhhhcC-CCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeC
Q 011360 269 PLLAHMVR-PDCHLLVYEFMKNGSLQDILDDVSRG-RRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVLLN 346 (487)
Q Consensus 269 ~l~~~~~~-~~~~~lv~E~~~~gsL~~~l~~~~~~-~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nill~ 346 (487)
.+..++.. +..+++++||++. +|...+..++.. .+.++...+..++.||+.|+.|| |++=|+||||||.|||+.
T Consensus 91 ~Lv~Vfl~~d~~v~l~fdYAEh-DL~~II~fHr~~~~~~lp~~mvKsilwQil~Gv~YL---H~NWvlHRDLKPaNIlvm 166 (438)
T KOG0666|consen 91 SLVKVFLSHDKKVWLLFDYAEH-DLWHIIKFHRASKAKQLPRSMVKSILWQILDGVHYL---HSNWVLHRDLKPANILVM 166 (438)
T ss_pred hHHHHHhccCceEEEEehhhhh-hHHHHHHHhccchhccCCHHHHHHHHHHHHhhhHHH---hhhheeeccCCcceEEEe
Confidence 99999887 8899999999977 899988765432 35788899999999999999999 555699999999999999
Q ss_pred CC----CCEEEeccCCccccCCCCcee-eEeeecccccccCCcccCCC-CCCchhHHHHHHHHHHHHHhCCCCccccCCC
Q 011360 347 DD----MEACISDLGLAMAIPDGYTRV-LISYVLGTMAYIAPEYFQQP-ELSEKCDIFSFGMLLISLVRGVPSFVFHQNG 420 (487)
Q Consensus 347 ~~----~~~kl~DFg~s~~~~~~~~~~-~~~~~~gt~~y~aPE~l~~~-~~~~~~DvwslG~~l~elltg~~pf~~~~~~ 420 (487)
.+ |.|||+|||+++.+....... ....++.|++|.|||.+.+. .||.+.||||.||++.||+|-.+.|.+....
T Consensus 167 gdgperG~VKIaDlGlaR~~~~plkpl~s~d~VVVTiWYRAPELLLGa~hYT~AiDvWAiGCIfaElLtl~PlF~g~E~k 246 (438)
T KOG0666|consen 167 GDGPERGRVKIADLGLARLFNNPLKPLASLDPVVVTIWYRAPELLLGARHYTKAIDVWAIGCIFAELLTLEPLFKGREEK 246 (438)
T ss_pred ccCCccCeeEeecccHHHHhhccccccccCCceEEEEEecChHHhcccccccchhhhHHHHHHHHHHHccCccccchhhh
Confidence 88 899999999999876554332 23456789999999998875 7999999999999999999999999665322
Q ss_pred Ccc---ccHHHHHHHHh-cCCCCCccCCCCCCC----------------CcHH------------HHHHHHHHHhhccCC
Q 011360 421 EEI---CSPEWLRKVMN-SKNPSRAIDPRLPGN----------------GYEK------------KMLHVLKIAYICTLH 468 (487)
Q Consensus 421 ~~~---~~~~~~~~~~~-~~~~~~~~~~~~~~~----------------~~~~------------~~~~l~~li~~cl~~ 468 (487)
... .....+.+++. -+.|... ++|.. ...+ -....++++..+|..
T Consensus 247 ~~~~~Pfq~dQl~rIf~vLG~Pt~~---~Wp~lkk~Pe~q~~ls~f~~~~~~n~sL~~~~~~~k~k~~~a~~LL~klL~y 323 (438)
T KOG0666|consen 247 IKTKNPFQHDQLDRIFEVLGTPTDK---DWPDLKKMPEYQTLLSDFRRHYYDNVSLHKYYHKHKVKDPSALDLLQKLLTY 323 (438)
T ss_pred cccCCCchHHHHHHHHHHcCCCccc---cchhhhhCcchHHHHHHhHHhhcCcchHHHHHHHhcCCCchHHHHHHHHhcc
Confidence 211 11122222222 1111111 11110 0000 012367889999999
Q ss_pred CCCCCCChHHHHH
Q 011360 469 DPEERPNSQYVRC 481 (487)
Q Consensus 469 ~P~~RPs~~~il~ 481 (487)
||-+|.|+++.++
T Consensus 324 DP~kRIta~qAle 336 (438)
T KOG0666|consen 324 DPIKRITAEQALE 336 (438)
T ss_pred CchhhccHHHHhc
Confidence 9999999999875
No 357
>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=100.00 E-value=9.6e-35 Score=281.43 Aligned_cols=256 Identities=21% Similarity=0.339 Sum_probs=195.0
Q ss_pred cccccccccccceeEEEEEecC--CCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccC-CCCCcccc
Q 011360 194 FASLEKIGSGGCGEVYKAELPG--SNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQI-RHRNILPL 270 (487)
Q Consensus 194 ~~~~~~lg~G~~g~v~~~~~~~--~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpnIv~l 270 (487)
|.+.+.||.|+||.||+++... .+|..||+|.+... .........+.+..|+.++.++ +||||+++
T Consensus 2 y~~~~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~-----------~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~ 70 (290)
T cd05613 2 FELLKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKA-----------TIVQKAKTTEHTRTERQVLEHIRQSPFLVTL 70 (290)
T ss_pred ceeeeeeccCCcceEEEEEeccCCCCCceEEEEEeehh-----------hhhhcchHHHHHHHHHHHHHhcccCCChhce
Confidence 7788999999999999997532 47889999987321 0111222345677899999999 69999999
Q ss_pred ceEEecCCeeEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCC
Q 011360 271 LAHMVRPDCHLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVLLNDDME 350 (487)
Q Consensus 271 ~~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nill~~~~~ 350 (487)
++++..+...|+||||+++++|.+++.. ...+++..+..++.|++.||.|| |+.|++||||+|+||+++.++.
T Consensus 71 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~----~~~l~~~~~~~~~~qi~~al~~l---H~~~i~H~dl~p~nil~~~~~~ 143 (290)
T cd05613 71 HYAFQTDTKLHLILDYINGGELFTHLSQ----RERFKEQEVQIYSGEIVLALEHL---HKLGIIYRDIKLENILLDSNGH 143 (290)
T ss_pred eeEeecCCeEEEEEecCCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHH---HhCCeeccCCCHHHeEECCCCC
Confidence 9999999999999999999999999864 35688899999999999999999 7788999999999999999999
Q ss_pred EEEeccCCccccCCCCceeeEeeecccccccCCcccCCC--CCCchhHHHHHHHHHHHHHhCCCCccccCCCCccccHHH
Q 011360 351 ACISDLGLAMAIPDGYTRVLISYVLGTMAYIAPEYFQQP--ELSEKCDIFSFGMLLISLVRGVPSFVFHQNGEEICSPEW 428 (487)
Q Consensus 351 ~kl~DFg~s~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~--~~~~~~DvwslG~~l~elltg~~pf~~~~~~~~~~~~~~ 428 (487)
+||+|||++.......... .....|+..|+|||.+.+. .++.++||||||+++|+|++|..||...... ....+.
T Consensus 144 ~kl~dfg~~~~~~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~--~~~~~~ 220 (290)
T cd05613 144 VVLTDFGLSKEFHEDEVER-AYSFCGTIEYMAPDIVRGGDGGHDKAVDWWSMGVLMYELLTGASPFTVDGEK--NSQAEI 220 (290)
T ss_pred EEEeeCccceecccccccc-cccccCCcccCChhhccCCCCCCCccccHHHHHHHHHHHhcCCCCCCcCCcc--ccHHHH
Confidence 9999999987654332211 1234588999999998753 5788999999999999999999999543221 111222
Q ss_pred HHHHHhcCCCCCccCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCC-----ChHHHHH
Q 011360 429 LRKVMNSKNPSRAIDPRLPGNGYEKKMLHVLKIAYICTLHDPEERP-----NSQYVRC 481 (487)
Q Consensus 429 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RP-----s~~~il~ 481 (487)
.........+ .+. .....+.+++.+||+.+|++|| ++.+++.
T Consensus 221 ~~~~~~~~~~-------~~~----~~~~~~~~ll~~~l~~~p~~R~~~~~~~~~~l~~ 267 (290)
T cd05613 221 SRRILKSEPP-------YPQ----EMSALAKDIIQRLLMKDPKKRLGCGPSDADEIKK 267 (290)
T ss_pred HHHhhccCCC-------CCc----cCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHc
Confidence 2222221111 111 1224578999999999999997 6666654
No 358
>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely
Probab=100.00 E-value=5.9e-35 Score=284.50 Aligned_cols=265 Identities=25% Similarity=0.356 Sum_probs=192.7
Q ss_pred cccccccccccccceeEEEEEecCCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCCCCccccc
Q 011360 192 DCFASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQIRHRNILPLL 271 (487)
Q Consensus 192 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~ 271 (487)
+.|.+.+.||.|+||.||+|... .++..||+|.+.... ........+.+|+.+++.++||||++++
T Consensus 7 ~~~~~~~~lg~g~~g~v~~~~~~-~~~~~v~iK~~~~~~-------------~~~~~~~~~~~e~~~~~~l~h~~i~~~~ 72 (302)
T cd07864 7 DKFDIIGQIGEGTYGQVYKARDK-DTGELVALKKVRLDN-------------EKEGFPITAIREIKILRQLNHRNIVNLK 72 (302)
T ss_pred hhhheeeeecccCCEEEEEEEEC-CCCcEEEEEEEeecc-------------cccCchHHHHHHHHHHHhCCCCCeeeee
Confidence 46899999999999999999764 578899999884321 1112234567799999999999999999
Q ss_pred eEEecCC----------eeEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCC
Q 011360 272 AHMVRPD----------CHLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPR 341 (487)
Q Consensus 272 ~~~~~~~----------~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~ 341 (487)
+++.... ..++||||+++ ++.+++.. ....+++..+..++.|++.||.|| |+.||+|+||+|+
T Consensus 73 ~~~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~l~~---~~~~~~~~~~~~i~~qi~~aL~~L---H~~~i~H~dl~p~ 145 (302)
T cd07864 73 EIVTDKQDALDFKKDKGAFYLVFEYMDH-DLMGLLES---GLVHFSEDHIKSFMKQLLEGLNYC---HKKNFLHRDIKCS 145 (302)
T ss_pred heecCcchhhhccccCCcEEEEEcccCc-cHHHHHhc---CCCCCCHHHHHHHHHHHHHHHHHH---HhCCeecCCCCHH
Confidence 9887654 78999999975 77777653 245689999999999999999999 7778999999999
Q ss_pred CEEeCCCCCEEEeccCCccccCCCCceeeEeeecccccccCCcccCC-CCCCchhHHHHHHHHHHHHHhCCCCccccCCC
Q 011360 342 NVLLNDDMEACISDLGLAMAIPDGYTRVLISYVLGTMAYIAPEYFQQ-PELSEKCDIFSFGMLLISLVRGVPSFVFHQNG 420 (487)
Q Consensus 342 Nill~~~~~~kl~DFg~s~~~~~~~~~~~~~~~~gt~~y~aPE~l~~-~~~~~~~DvwslG~~l~elltg~~pf~~~~~~ 420 (487)
||++++++.+||+|||++.......... .....++..|+|||.+.+ ..++.++||||||+++|+|++|++||.....
T Consensus 146 nili~~~~~~kl~dfg~~~~~~~~~~~~-~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~~~el~~g~~~~~~~~~- 223 (302)
T cd07864 146 NILLNNKGQIKLADFGLARLYNSEESRP-YTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFTKKPIFQANQE- 223 (302)
T ss_pred HEEECCCCcEEeCcccccccccCCcccc-cccceeccCccChHHhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCh-
Confidence 9999999999999999997664432211 122346788999998865 4578999999999999999999999943221
Q ss_pred CccccHHHHHHHHhcCCCCCc-----------cCCCC-----CCCCcHHHHHHHHHHHhhccCCCCCCCCChHHHHH
Q 011360 421 EEICSPEWLRKVMNSKNPSRA-----------IDPRL-----PGNGYEKKMLHVLKIAYICTLHDPEERPNSQYVRC 481 (487)
Q Consensus 421 ~~~~~~~~~~~~~~~~~~~~~-----------~~~~~-----~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~~il~ 481 (487)
......+........+... .++.. ........+..+.+++.+||+.+|++|||+.+++.
T Consensus 224 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~ 298 (302)
T cd07864 224 --LAQLELISRLCGSPCPAVWPDVIKLPYFNTMKPKKQYRRRLREEFSFIPTPALDLLDHMLTLDPSKRCTAEEALN 298 (302)
T ss_pred --HHHHHHHHHHhCCCChhhcccccccccccccccccccccchhhhcCCCCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 1011111111111100000 00000 00001112456889999999999999999999875
No 359
>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili
Probab=100.00 E-value=7.7e-35 Score=280.92 Aligned_cols=264 Identities=22% Similarity=0.323 Sum_probs=192.5
Q ss_pred cccccccccccceeEEEEEecCCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCC-CCCccccce
Q 011360 194 FASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQIR-HRNILPLLA 272 (487)
Q Consensus 194 ~~~~~~lg~G~~g~v~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-hpnIv~l~~ 272 (487)
|.+.+.||.|++|.||+|.. ..+++.|+||++... ..........+|+..+..++ ||||+++++
T Consensus 1 y~~~~~ig~g~~g~v~~~~~-~~~~~~~~ik~~~~~--------------~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~ 65 (283)
T cd07830 1 YKVIKQLGDGTFGSVYLARN-KETGELVAIKKMKKK--------------FYSWEECMNLREVKSLRKLNEHPNIVKLKE 65 (283)
T ss_pred CeeheeeccCCceEEEEEEE-CCCCcEEEEEEehhh--------------ccchhHHHHHHHHHHHHhccCCCCchhHHH
Confidence 56778999999999999975 456889999987321 01112223456888888998 999999999
Q ss_pred EEecCCeeEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCCEE
Q 011360 273 HMVRPDCHLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVLLNDDMEAC 352 (487)
Q Consensus 273 ~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nill~~~~~~k 352 (487)
++..++..++||||+ +|+|.+++.. .....+++..+..++.|++.+|.|| |++|++|+||+|+||+++.++.++
T Consensus 66 ~~~~~~~~~lv~e~~-~~~l~~~~~~--~~~~~~~~~~~~~~~~~l~~~l~~L---h~~~i~H~dl~~~ni~i~~~~~~~ 139 (283)
T cd07830 66 VFRENDELYFVFEYM-EGNLYQLMKD--RKGKPFSESVIRSIIYQILQGLAHI---HKHGFFHRDLKPENLLVSGPEVVK 139 (283)
T ss_pred HhhcCCcEEEEEecC-CCCHHHHHHh--cccccCCHHHHHHHHHHHHHHHHHH---HHCCcccCCCChhhEEEcCCCCEE
Confidence 999999999999999 8899988865 2235789999999999999999999 677899999999999999999999
Q ss_pred EeccCCccccCCCCceeeEeeecccccccCCcccC-CCCCCchhHHHHHHHHHHHHHhCCCCccccCCCCcc--------
Q 011360 353 ISDLGLAMAIPDGYTRVLISYVLGTMAYIAPEYFQ-QPELSEKCDIFSFGMLLISLVRGVPSFVFHQNGEEI-------- 423 (487)
Q Consensus 353 l~DFg~s~~~~~~~~~~~~~~~~gt~~y~aPE~l~-~~~~~~~~DvwslG~~l~elltg~~pf~~~~~~~~~-------- 423 (487)
|+|||.+......... ....++..|+|||.+. ...++.++|+||||+++|+|++|.+||.........
T Consensus 140 l~d~~~~~~~~~~~~~---~~~~~~~~~~aPE~~~~~~~~~~~~Di~s~G~~l~el~~g~~~~~~~~~~~~~~~~~~~~~ 216 (283)
T cd07830 140 IADFGLAREIRSRPPY---TDYVSTRWYRAPEILLRSTSYSSPVDIWALGCIMAELYTLRPLFPGSSEIDQLYKICSVLG 216 (283)
T ss_pred EeecccceeccCCCCc---CCCCCcccccCceeeecCcCcCCccchhhHHHHHHHHHhCCCccCCCChHHHHHHHHHhcC
Confidence 9999998765433221 2345788999999875 446789999999999999999999999544221100
Q ss_pred --ccHHHHHHHHhcCCCCCccCCCCCC---CCcHHHHHHHHHHHhhccCCCCCCCCChHHHHH
Q 011360 424 --CSPEWLRKVMNSKNPSRAIDPRLPG---NGYEKKMLHVLKIAYICTLHDPEERPNSQYVRC 481 (487)
Q Consensus 424 --~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~l~~li~~cl~~~P~~RPs~~~il~ 481 (487)
....|.............+....+. .........+.+++.+||+.+|++|||+++++.
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~ 279 (283)
T cd07830 217 TPTKQDWPEGYKLASKLGFRFPQFAPTSLHQLIPNASPEAIDLIKDMLRWDPKKRPTASQALQ 279 (283)
T ss_pred CCChhhhhhHhhhhccccccccccccccHHHHcccCCHHHHHHHHHhcccCcccCCCHHHHhh
Confidence 0000111110000111011100000 001112356889999999999999999999875
No 360
>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=5.6e-35 Score=277.09 Aligned_cols=264 Identities=28% Similarity=0.397 Sum_probs=208.1
Q ss_pred cccccccccccccceeEEEEEecCCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhcc--CCCCCccc
Q 011360 192 DCFASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQ--IRHRNILP 269 (487)
Q Consensus 192 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~--l~hpnIv~ 269 (487)
.+..+.+.+|+|.||.||+|.| .|+.||||++.. ...+.+.+|.++.+. |+|+||+.
T Consensus 211 rqI~L~e~IGkGRyGEVwrG~w---rGe~VAVKiF~s------------------rdE~SWfrEtEIYqTvmLRHENILg 269 (513)
T KOG2052|consen 211 RQIVLQEIIGKGRFGEVWRGRW---RGEDVAVKIFSS------------------RDERSWFRETEIYQTVMLRHENILG 269 (513)
T ss_pred heeEEEEEecCccccceeeccc---cCCceEEEEecc------------------cchhhhhhHHHHHHHHHhccchhhh
Confidence 3578899999999999999999 578999999832 123455666666554 59999999
Q ss_pred cceEEecC----CeeEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhc-----CCCCeeecCCCC
Q 011360 270 LLAHMVRP----DCHLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMY-----HSASIIHGDIKP 340 (487)
Q Consensus 270 l~~~~~~~----~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~-----h~~givH~Dlkp 340 (487)
|++.-..+ ..++||++|.+.|||.|||.. ..++....++++..+|+||++||.. ....|.|||||+
T Consensus 270 FIaaD~~~~gs~TQLwLvTdYHe~GSL~DyL~r-----~tv~~~~ml~LalS~AsGLaHLH~eI~GTqgKPaIAHRDlKS 344 (513)
T KOG2052|consen 270 FIAADNKDNGSWTQLWLVTDYHEHGSLYDYLNR-----NTVTTEGMLKLALSIASGLAHLHMEIVGTQGKPAIAHRDLKS 344 (513)
T ss_pred hhhccccCCCceEEEEEeeecccCCcHHHHHhh-----ccCCHHHHHHHHHHHhhhHHHHHHHHhcCCCCchhhcccccc
Confidence 99865543 357999999999999999974 6789999999999999999999742 356699999999
Q ss_pred CCEEeCCCCCEEEeccCCccccCCCCce--eeEeeecccccccCCcccCCCC----C-C-chhHHHHHHHHHHHHHhC--
Q 011360 341 RNVLLNDDMEACISDLGLAMAIPDGYTR--VLISYVLGTMAYIAPEYFQQPE----L-S-EKCDIFSFGMLLISLVRG-- 410 (487)
Q Consensus 341 ~Nill~~~~~~kl~DFg~s~~~~~~~~~--~~~~~~~gt~~y~aPE~l~~~~----~-~-~~~DvwslG~~l~elltg-- 410 (487)
.|||+..+|..-|+|+|+|......... ......+||.+|||||++.... + + ..+||||||.++||+..+
T Consensus 345 KNILVKkn~~C~IADLGLAv~h~~~t~~idi~~N~rVGTKRYMAPEvLdetin~~~Fesyk~ADIYafgLVlWEiarRc~ 424 (513)
T KOG2052|consen 345 KNILVKKNGTCCIADLGLAVRHDSDTDTIDIPPNPRVGTKRYMAPEVLDETINMKHFESYKRADIYAFGLVLWEIARRCE 424 (513)
T ss_pred ccEEEccCCcEEEeeceeeEEecccCCcccCCCCCccceeeccChHHhhhhcChhhhhhhhHHHHHHHHHHHHHHHHHhh
Confidence 9999999999999999999876544322 2224568999999999997541 1 2 358999999999999854
Q ss_pred --------CCCccccCCCCccccHHHHHHHHhcCCCCCccCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCChHHHHHH
Q 011360 411 --------VPSFVFHQNGEEICSPEWLRKVMNSKNPSRAIDPRLPGNGYEKKMLHVLKIAYICTLHDPEERPNSQYVRCR 482 (487)
Q Consensus 411 --------~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~~il~~ 482 (487)
++||-.-.+. ....+.+++++...+.+..+++++.+ .+.+..+.++|+.||..||.-|-|+=.|.+.
T Consensus 425 ~ggi~eey~~Pyyd~Vp~--DPs~eeMrkVVCv~~~RP~ipnrW~s---~~~l~~m~klMkeCW~~Np~aRltALriKKt 499 (513)
T KOG2052|consen 425 SGGIVEEYQLPYYDVVPS--DPSFEEMRKVVCVQKLRPNIPNRWKS---DPALRVMAKLMKECWYANPAARLTALRIKKT 499 (513)
T ss_pred cCCEehhhcCCcccCCCC--CCCHHHHhcceeecccCCCCCccccc---CHHHHHHHHHHHHhhcCCchhhhHHHHHHHH
Confidence 3566433222 22346677777777777666666654 4677889999999999999999999999988
Q ss_pred Hhhh
Q 011360 483 LSQL 486 (487)
Q Consensus 483 L~~l 486 (487)
|.++
T Consensus 500 l~~l 503 (513)
T KOG2052|consen 500 LAKL 503 (513)
T ss_pred HHHH
Confidence 8765
No 361
>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U
Probab=100.00 E-value=9e-35 Score=286.56 Aligned_cols=263 Identities=22% Similarity=0.346 Sum_probs=193.1
Q ss_pred ccccccccccccccceeEEEEEecCCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCCCCcccc
Q 011360 191 EDCFASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQIRHRNILPL 270 (487)
Q Consensus 191 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l 270 (487)
.++|.+.+.||.|+||.||++. +..++..||+|++... .........+..|+.++..++||||+++
T Consensus 9 ~~~y~~~~~ig~g~~g~v~~~~-~~~~~~~vaiK~~~~~-------------~~~~~~~~~~~~E~~~l~~l~hpniv~~ 74 (328)
T cd07856 9 TNRYVDLQPVGMGAFGLVCSAR-DQLTGQNVAIKKIMKP-------------FSTPVLAKRTYRELKLLKHLRHENIISL 74 (328)
T ss_pred ccceEEEEeecccCCeEEEEEE-ECCCCCEEEEEEeccc-------------ccccchhHHHHHHHHHHHhcCCCCeeeE
Confidence 4579999999999999999996 4568899999987321 1112234567789999999999999999
Q ss_pred ceEEec-CCeeEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCC
Q 011360 271 LAHMVR-PDCHLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVLLNDDM 349 (487)
Q Consensus 271 ~~~~~~-~~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nill~~~~ 349 (487)
++++.. ....|++|||+ +++|.+++. ...++...+..++.|++.||.|| |+.|++||||+|+||+++.++
T Consensus 75 ~~~~~~~~~~~~lv~e~~-~~~L~~~~~-----~~~~~~~~~~~~~~ql~~aL~~L---H~~~iiH~dl~p~Nili~~~~ 145 (328)
T cd07856 75 SDIFISPLEDIYFVTELL-GTDLHRLLT-----SRPLEKQFIQYFLYQILRGLKYV---HSAGVVHRDLKPSNILINENC 145 (328)
T ss_pred eeeEecCCCcEEEEeehh-ccCHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHH---HhCCcccCCCCHHHEeECCCC
Confidence 998865 56789999999 668988875 24578888899999999999999 778899999999999999999
Q ss_pred CEEEeccCCccccCCCCceeeEeeecccccccCCcccCC-CCCCchhHHHHHHHHHHHHHhCCCCccccCCCCcc-----
Q 011360 350 EACISDLGLAMAIPDGYTRVLISYVLGTMAYIAPEYFQQ-PELSEKCDIFSFGMLLISLVRGVPSFVFHQNGEEI----- 423 (487)
Q Consensus 350 ~~kl~DFg~s~~~~~~~~~~~~~~~~gt~~y~aPE~l~~-~~~~~~~DvwslG~~l~elltg~~pf~~~~~~~~~----- 423 (487)
.++|+|||.+....... ....++..|+|||.+.+ ..++.++||||||+++|+|+||.+||.........
T Consensus 146 ~~~l~dfg~~~~~~~~~-----~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~tg~~~f~~~~~~~~~~~~~~ 220 (328)
T cd07856 146 DLKICDFGLARIQDPQM-----TGYVSTRYYRAPEIMLTWQKYDVEVDIWSAGCIFAEMLEGKPLFPGKDHVNQFSIITD 220 (328)
T ss_pred CEEeCccccccccCCCc-----CCCcccccccCceeeeccCCcCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHH
Confidence 99999999987543322 23357889999998765 57899999999999999999999999543321000
Q ss_pred ----ccHHHHHHHHhcCCCCCc--cC--CCCCC-CCcHHHHHHHHHHHhhccCCCCCCCCChHHHHH
Q 011360 424 ----CSPEWLRKVMNSKNPSRA--ID--PRLPG-NGYEKKMLHVLKIAYICTLHDPEERPNSQYVRC 481 (487)
Q Consensus 424 ----~~~~~~~~~~~~~~~~~~--~~--~~~~~-~~~~~~~~~l~~li~~cl~~~P~~RPs~~~il~ 481 (487)
...++............. +. ...+. .........+.+++.+||+.+|++|||+.+++.
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~ell~ 287 (328)
T cd07856 221 LLGTPPDDVINTICSENTLRFVQSLPKREPVPFSEKFKNADPSAIDLLEKMLVFDPQKRISAAEALA 287 (328)
T ss_pred HhCCCCHHHHHhccchhhHHHHhhccccCCCcHHHHcCCCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 001111111000000000 00 00000 000112356889999999999999999999875
No 362
>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.9e-35 Score=269.13 Aligned_cols=258 Identities=24% Similarity=0.401 Sum_probs=204.6
Q ss_pred cccc-cccccccceeEEEEEecCCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccC-CCCCccccc
Q 011360 194 FASL-EKIGSGGCGEVYKAELPGSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQI-RHRNILPLL 271 (487)
Q Consensus 194 ~~~~-~~lg~G~~g~v~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpnIv~l~ 271 (487)
|.+. +.||+|+++.|..+. ...+|..||||++. +.......++.+|++++.+. .|+||+.++
T Consensus 79 YkLt~e~LGeGAyasVqtcv-~i~t~~EYAVKiid---------------Kq~gHsR~RvfREVe~f~~Cqgh~nilqLi 142 (463)
T KOG0607|consen 79 YKLTSELLGEGAYASVQTCV-SIQTGKEYAVKIID---------------KQPGHSRSRVFREVETFYQCQGHKNILQLI 142 (463)
T ss_pred HHhHHHHhcCccceeeeeee-eeccchhhhhhhhh---------------cCCchHHHHHHHHHHHHHHhcCCccHHHHH
Confidence 4433 679999999999885 56799999999872 22344567788999999888 799999999
Q ss_pred eEEecCCeeEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCC--
Q 011360 272 AHMVRPDCHLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVLLNDDM-- 349 (487)
Q Consensus 272 ~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nill~~~~-- 349 (487)
++|.++...|+|||-|.||+|...|.. ...+++..+.++.++|+.||.|| |.+||.||||||+|||...-.
T Consensus 143 efFEdd~~FYLVfEKm~GGplLshI~~----~~~F~E~EAs~vvkdia~aLdFl---H~kgIAHRDlKPENiLC~~pn~v 215 (463)
T KOG0607|consen 143 EFFEDDTRFYLVFEKMRGGPLLSHIQK----RKHFNEREASRVVKDIASALDFL---HTKGIAHRDLKPENILCESPNKV 215 (463)
T ss_pred HHhcccceEEEEEecccCchHHHHHHH----hhhccHHHHHHHHHHHHHHHHHH---hhcCcccccCCccceeecCCCCc
Confidence 999999999999999999999999976 57899999999999999999999 899999999999999997544
Q ss_pred -CEEEeccCCccccCCCC-----ceeeEeeecccccccCCcccC-----CCCCCchhHHHHHHHHHHHHHhCCCCccccC
Q 011360 350 -EACISDLGLAMAIPDGY-----TRVLISYVLGTMAYIAPEYFQ-----QPELSEKCDIFSFGMLLISLVRGVPSFVFHQ 418 (487)
Q Consensus 350 -~~kl~DFg~s~~~~~~~-----~~~~~~~~~gt~~y~aPE~l~-----~~~~~~~~DvwslG~~l~elltg~~pf~~~~ 418 (487)
-+|||||.+..-..... ......+.+|+..|||||+.. ...|+.++|.||||+++|=|++|.+||.+..
T Consensus 216 sPvKiCDfDLgSg~k~~~~~spastP~L~tPvGSAEfMAPEVVd~fv~qA~~YDKrCDlwSLGvIlYImLsGYpPFvG~C 295 (463)
T KOG0607|consen 216 SPVKICDFDLGSGIKLNNDCSPASTPELLTPVGSAEFMAPEVVDVFVDQATFYDKRCDLWSLGVILYIMLSGYPPFVGHC 295 (463)
T ss_pred CceeeeccccccccccCCCCCCCCCccccCcccchhhcchhHHhhhccccccccccccHHHHHHHHHHHHhCCCCccCcc
Confidence 38999998875432111 111123467889999999763 3478999999999999999999999997764
Q ss_pred CCC------cc---ccHHHHHHHHhcCCCCCccCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCChHHHHH
Q 011360 419 NGE------EI---CSPEWLRKVMNSKNPSRAIDPRLPGNGYEKKMLHVLKIAYICTLHDPEERPNSQYVRC 481 (487)
Q Consensus 419 ~~~------~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~~il~ 481 (487)
... +. |....+..+..+. ..+|......++.+..+++...|..++.+|.++.+++.
T Consensus 296 g~dCGWdrGe~Cr~CQ~~LFesIQEGk-------YeFPdkdWahIS~eakdlisnLlvrda~~rlsa~~vln 360 (463)
T KOG0607|consen 296 GADCGWDRGEVCRVCQNKLFESIQEGK-------YEFPDKDWAHISSEAKDLISNLLVRDAKQRLSAAQVLN 360 (463)
T ss_pred CCcCCccCCCccHHHHHHHHHHHhccC-------CcCChhhhHHhhHHHHHHHHHHHhccHHhhhhhhhccC
Confidence 311 11 1222233333222 23667777888889999999999999999999887754
No 363
>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins. Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic
Probab=100.00 E-value=6.6e-35 Score=285.24 Aligned_cols=263 Identities=22% Similarity=0.318 Sum_probs=190.7
Q ss_pred cccccccccccccceeEEEEEecCCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCCCCccccc
Q 011360 192 DCFASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQIRHRNILPLL 271 (487)
Q Consensus 192 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~ 271 (487)
++|.+.+.||.|+||.||+|.. ..++..+|+|++..... .......+.+|+.+++.++||||++++
T Consensus 8 ~~y~~~~~lg~g~~~~v~~~~~-~~~~~~~~ik~~~~~~~-------------~~~~~~~~~~e~~~l~~l~h~~i~~~~ 73 (311)
T cd07866 8 RDYEILGKLGEGTFGEVYKARQ-IKTGRVVALKKILMHNE-------------KDGFPITALREIKILKKLKHPNVVPLI 73 (311)
T ss_pred ccEEEEEEeccCCCEEEEEEEE-CCCCcEEEEEEEEeccC-------------CCCcchhHHHHHHHHHhcCCCCccchh
Confidence 4699999999999999999975 45788999998854211 111123456799999999999999999
Q ss_pred eEEecCC--------eeEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCE
Q 011360 272 AHMVRPD--------CHLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNV 343 (487)
Q Consensus 272 ~~~~~~~--------~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Ni 343 (487)
+++.... .+++||||+.+ +|...+.. ....+++..+..++.|+++||.|| |+.|++|+||||+||
T Consensus 74 ~~~~~~~~~~~~~~~~~~lv~~~~~~-~l~~~~~~---~~~~~~~~~~~~i~~~l~~al~~l---H~~~i~H~dl~p~ni 146 (311)
T cd07866 74 DMAVERPDKSKRKRGSVYMVTPYMDH-DLSGLLEN---PSVKLTESQIKCYMLQLLEGINYL---HENHILHRDIKAANI 146 (311)
T ss_pred hheecccccccccCceEEEEEecCCc-CHHHHHhc---cccCCCHHHHHHHHHHHHHHHHHH---HhCCeecCCCCHHHE
Confidence 9875433 46999999954 67766653 245789999999999999999999 778899999999999
Q ss_pred EeCCCCCEEEeccCCccccCCCCcee---------eEeeecccccccCCcccCCC-CCCchhHHHHHHHHHHHHHhCCCC
Q 011360 344 LLNDDMEACISDLGLAMAIPDGYTRV---------LISYVLGTMAYIAPEYFQQP-ELSEKCDIFSFGMLLISLVRGVPS 413 (487)
Q Consensus 344 ll~~~~~~kl~DFg~s~~~~~~~~~~---------~~~~~~gt~~y~aPE~l~~~-~~~~~~DvwslG~~l~elltg~~p 413 (487)
+++.++.++|+|||++.......... ......+++.|+|||.+.+. .++.++||||||+++|+|++|.+|
T Consensus 147 l~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~~g~~~ 226 (311)
T cd07866 147 LIDNQGILKIADFGLARPYDGPPPNPKGGGGGGTRKYTNLVVTRWYRPPELLLGERRYTTAVDIWGIGCVFAEMFTRRPI 226 (311)
T ss_pred EECCCCCEEECcCccchhccCCCcccccCCcccccccccceeccCcCChHHhhCCCccCchhHhHHHHHHHHHHHhCCCC
Confidence 99999999999999997654322111 11233568889999987654 588999999999999999999999
Q ss_pred ccccCCCCccccHHHHHHHHh---cCCCC---------C----ccCCCCCCC---CcHHHHHHHHHHHhhccCCCCCCCC
Q 011360 414 FVFHQNGEEICSPEWLRKVMN---SKNPS---------R----AIDPRLPGN---GYEKKMLHVLKIAYICTLHDPEERP 474 (487)
Q Consensus 414 f~~~~~~~~~~~~~~~~~~~~---~~~~~---------~----~~~~~~~~~---~~~~~~~~l~~li~~cl~~~P~~RP 474 (487)
|...... ........ ...+. . ......+.. ........+.+++.+||..+|.+||
T Consensus 227 ~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~ 300 (311)
T cd07866 227 LQGKSDI------DQLHLIFKLCGTPTEETWPGWRSLPGCEGVHSFTNYPRTLEERFGKLGPEGLDLLSKLLSLDPYKRL 300 (311)
T ss_pred CCCCCHH------HHHHHHHHHhCCCChhhchhhhhcccccccccCCCCCccHHHHcccCChhHHHHHHHHcccCcccCc
Confidence 9543221 11111111 00000 0 000011110 0112235688999999999999999
Q ss_pred ChHHHHH
Q 011360 475 NSQYVRC 481 (487)
Q Consensus 475 s~~~il~ 481 (487)
|+.+++.
T Consensus 301 t~~ell~ 307 (311)
T cd07866 301 TASDALE 307 (311)
T ss_pred CHHHHhc
Confidence 9999874
No 364
>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12
Probab=100.00 E-value=1.3e-34 Score=287.25 Aligned_cols=257 Identities=26% Similarity=0.361 Sum_probs=192.4
Q ss_pred ccccccccccccccceeEEEEEecCCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCCCCcccc
Q 011360 191 EDCFASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQIRHRNILPL 270 (487)
Q Consensus 191 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l 270 (487)
.++|.+.+.||.|+||.||++.. ..++..||+|++... .........+.+|+.+++.++||||+++
T Consensus 14 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~~~vavK~~~~~-------------~~~~~~~~~~~~E~~~l~~l~h~~iv~~ 79 (343)
T cd07880 14 PDRYRDLKQVGSGAYGTVCSALD-RRTGAKVAIKKLYRP-------------FQSELFAKRAYRELRLLKHMKHENVIGL 79 (343)
T ss_pred ccceEEEEEeeecCCeEEEEEEE-CCCCcEEEEEEeccc-------------ccchHHHHHHHHHHHHHHhcCCCCccce
Confidence 45699999999999999999974 467899999987321 1112234467789999999999999999
Q ss_pred ceEEecCC------eeEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEE
Q 011360 271 LAHMVRPD------CHLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVL 344 (487)
Q Consensus 271 ~~~~~~~~------~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nil 344 (487)
++++.... ..++||||+ +++|.+++.. ..+++..+..++.|++.||.|| |+.||+||||||+||+
T Consensus 80 ~~~~~~~~~~~~~~~~~lv~e~~-~~~l~~~~~~-----~~l~~~~~~~i~~qi~~al~~L---H~~gi~H~dlkp~Nil 150 (343)
T cd07880 80 LDVFTPDLSLDRFHDFYLVMPFM-GTDLGKLMKH-----EKLSEDRIQFLVYQMLKGLKYI---HAAGIIHRDLKPGNLA 150 (343)
T ss_pred eeeecCCccccccceEEEEEecC-CCCHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHH---HhCCeecCCCCHHHEE
Confidence 99887654 358999999 7799888752 4689999999999999999999 7788999999999999
Q ss_pred eCCCCCEEEeccCCccccCCCCceeeEeeecccccccCCcccCC-CCCCchhHHHHHHHHHHHHHhCCCCccccCCCCcc
Q 011360 345 LNDDMEACISDLGLAMAIPDGYTRVLISYVLGTMAYIAPEYFQQ-PELSEKCDIFSFGMLLISLVRGVPSFVFHQNGEEI 423 (487)
Q Consensus 345 l~~~~~~kl~DFg~s~~~~~~~~~~~~~~~~gt~~y~aPE~l~~-~~~~~~~DvwslG~~l~elltg~~pf~~~~~~~~~ 423 (487)
++.++.++|+|||++....... ....+++.|+|||.+.+ ..++.++|+||||+++|++++|..||.....
T Consensus 151 l~~~~~~kl~dfg~~~~~~~~~-----~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~---- 221 (343)
T cd07880 151 VNEDCELKILDFGLARQTDSEM-----TGYVVTRWYRAPEVILNWMHYTQTVDIWSVGCIMAEMLTGKPLFKGHDH---- 221 (343)
T ss_pred EcCCCCEEEeecccccccccCc-----cccccCCcccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCH----
Confidence 9999999999999987654322 23457889999998876 4688999999999999999999999954321
Q ss_pred ccHHHHHHHHhcC-CCCCccC------------CCCCC-------CCcHHHHHHHHHHHhhccCCCCCCCCChHHHHH
Q 011360 424 CSPEWLRKVMNSK-NPSRAID------------PRLPG-------NGYEKKMLHVLKIAYICTLHDPEERPNSQYVRC 481 (487)
Q Consensus 424 ~~~~~~~~~~~~~-~~~~~~~------------~~~~~-------~~~~~~~~~l~~li~~cl~~~P~~RPs~~~il~ 481 (487)
........... .+...+. ..++. .........+.+++.+|++.||++|||+.+++.
T Consensus 222 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~t~~~~l~ 297 (343)
T cd07880 222 --LDQLMEIMKVTGTPSKEFVQKLQSEDAKNYVKKLPRFRKKDFRSLLPNANPLAVNVLEKMLVLDAESRITAAEALA 297 (343)
T ss_pred --HHHHHHHHHhcCCCCHHHHHhhcchhHHHHHHhccccCcchHHHhccCCChHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 01111111100 0000000 00000 001122345889999999999999999999873
No 365
>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14
Probab=100.00 E-value=2e-34 Score=286.14 Aligned_cols=257 Identities=24% Similarity=0.333 Sum_probs=190.8
Q ss_pred ccccccccccccccceeEEEEEecCCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCCCCcccc
Q 011360 191 EDCFASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQIRHRNILPL 270 (487)
Q Consensus 191 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l 270 (487)
.++|.+.+.||+|+||.||+|.. ..++..||+|++... .........+.+|+.++.+++||||+++
T Consensus 16 ~~~y~~~~~lg~G~~g~v~~~~~-~~~~~~vaiK~~~~~-------------~~~~~~~~~~~~Ei~~l~~l~h~~iv~~ 81 (345)
T cd07877 16 PERYQNLSPVGSGAYGSVCAAFD-TKTGLRVAVKKLSRP-------------FQSIIHAKRTYRELRLLKHMKHENVIGL 81 (345)
T ss_pred cCceEEEEEeeecCCeEEEEEEE-cCCCeEEEEEEecCc-------------chhhHHHHHHHHHHHHHHHcCCCcccce
Confidence 46799999999999999999964 457899999987321 1112234557789999999999999999
Q ss_pred ceEEecC------CeeEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEE
Q 011360 271 LAHMVRP------DCHLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVL 344 (487)
Q Consensus 271 ~~~~~~~------~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nil 344 (487)
++++... ...|++++++ +++|.+++.. ..+++..+..++.|++.||.|| |+.||+||||||+||+
T Consensus 82 ~~~~~~~~~~~~~~~~~lv~~~~-~~~L~~~~~~-----~~l~~~~~~~i~~qi~~aL~~L---H~~~ivH~dlkp~NIl 152 (345)
T cd07877 82 LDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKC-----QKLTDDHVQFLIYQILRGLKYI---HSADIIHRDLKPSNLA 152 (345)
T ss_pred eeeeeecccccccccEEEEehhc-ccCHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHH---HHCCeeecCCChHHEE
Confidence 9987643 3467888887 8899888753 4589999999999999999999 6788999999999999
Q ss_pred eCCCCCEEEeccCCccccCCCCceeeEeeecccccccCCcccCC-CCCCchhHHHHHHHHHHHHHhCCCCccccCCCCcc
Q 011360 345 LNDDMEACISDLGLAMAIPDGYTRVLISYVLGTMAYIAPEYFQQ-PELSEKCDIFSFGMLLISLVRGVPSFVFHQNGEEI 423 (487)
Q Consensus 345 l~~~~~~kl~DFg~s~~~~~~~~~~~~~~~~gt~~y~aPE~l~~-~~~~~~~DvwslG~~l~elltg~~pf~~~~~~~~~ 423 (487)
++.++.+||+|||++....... ....++..|+|||.+.+ ..++.++|||||||++|+|++|..||......
T Consensus 153 l~~~~~~kl~dfg~~~~~~~~~-----~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~--- 224 (345)
T cd07877 153 VNEDCELKILDFGLARHTDDEM-----TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHI--- 224 (345)
T ss_pred EcCCCCEEEecccccccccccc-----cccccCCCccCHHHHhCccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH---
Confidence 9999999999999987653321 23457889999998866 56889999999999999999999999533211
Q ss_pred ccHHHHHHHHhc-CCCCCccC---------------CCCCCCC----cHHHHHHHHHHHhhccCCCCCCCCChHHHHH
Q 011360 424 CSPEWLRKVMNS-KNPSRAID---------------PRLPGNG----YEKKMLHVLKIAYICTLHDPEERPNSQYVRC 481 (487)
Q Consensus 424 ~~~~~~~~~~~~-~~~~~~~~---------------~~~~~~~----~~~~~~~l~~li~~cl~~~P~~RPs~~~il~ 481 (487)
......... ..+...+- +..+... ......++.+++.+||+.+|.+|||+.+++.
T Consensus 225 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~ 299 (345)
T cd07877 225 ---DQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALA 299 (345)
T ss_pred ---HHHHHHHHHhCCCCHHHHhhcccHhHHHHHHHhcccCCcchhhhcCCCCHHHHHHHHHHcCCChhhcCCHHHHhc
Confidence 111111000 00000000 0000000 0012346889999999999999999999874
No 366
>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and
Probab=100.00 E-value=2.1e-34 Score=284.41 Aligned_cols=261 Identities=26% Similarity=0.369 Sum_probs=197.1
Q ss_pred ccccccccccccceeEEEEEecCCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCCCCccccce
Q 011360 193 CFASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQIRHRNILPLLA 272 (487)
Q Consensus 193 ~~~~~~~lg~G~~g~v~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~ 272 (487)
+|.+.+.||.|++|.||+|+. ..++..||+|++... .........+.+|+.+++.++||||+++++
T Consensus 1 ~y~i~~~ig~g~~~~v~~~~~-~~~~~~~~iK~~~~~-------------~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~ 66 (330)
T cd07834 1 RYELLKPIGSGAYGVVCSAVD-KRTGRKVAIKKISNV-------------FDDLIDAKRILREIKLLRHLRHENIIGLLD 66 (330)
T ss_pred CceeeeeecCCCCeEEEEEEe-CCCCcEEEEEeeccc-------------cccchhhhhHHHHHHHHHhcCCcchhhhhh
Confidence 378889999999999999975 456889999987321 111334567888999999999999999999
Q ss_pred EEecCC-----eeEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCC
Q 011360 273 HMVRPD-----CHLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVLLND 347 (487)
Q Consensus 273 ~~~~~~-----~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nill~~ 347 (487)
++...+ .+|++|||++ ++|.+++.. ...+++..+..++.|++.||.|| |+.|++||||||+||+++.
T Consensus 67 ~~~~~~~~~~~~~~lv~e~~~-~~l~~~l~~----~~~l~~~~~~~i~~~l~~~l~~L---H~~gi~H~dlkp~nili~~ 138 (330)
T cd07834 67 ILRPPSPEDFNDVYIVTELME-TDLHKVIKS----PQPLTDDHIQYFLYQILRGLKYL---HSANVIHRDLKPSNILVNS 138 (330)
T ss_pred hhcccCcccccceEEEecchh-hhHHHHHhC----CCCCCHHHHHHHHHHHHHHHHHH---HhCCeecCCCCHHHEEEcC
Confidence 988775 7899999996 588888753 34789999999999999999999 7788999999999999999
Q ss_pred CCCEEEeccCCccccCCCCce-eeEeeecccccccCCcccCCC-CCCchhHHHHHHHHHHHHHhCCCCccccCCCCcccc
Q 011360 348 DMEACISDLGLAMAIPDGYTR-VLISYVLGTMAYIAPEYFQQP-ELSEKCDIFSFGMLLISLVRGVPSFVFHQNGEEICS 425 (487)
Q Consensus 348 ~~~~kl~DFg~s~~~~~~~~~-~~~~~~~gt~~y~aPE~l~~~-~~~~~~DvwslG~~l~elltg~~pf~~~~~~~~~~~ 425 (487)
++.++|+|||.+......... .......++..|+|||.+.+. .++.++|+||||+++|+|++|.+||.....
T Consensus 139 ~~~~~L~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~il~~l~~g~~pf~~~~~------ 212 (330)
T cd07834 139 NCDLKICDFGLARGVDPDEDEKGFLTEYVVTRWYRAPELLLSSSRYTKAIDIWSVGCIFAELLTRKPLFPGRDY------ 212 (330)
T ss_pred CCCEEEcccCceEeecccccccccccccccccCcCCceeeecccCCCcchhHHHHHHHHHHHHcCCCCcCCCCH------
Confidence 999999999999876544210 111334578899999999877 889999999999999999999999954331
Q ss_pred HHHHHHHHhc-CCCC-Ccc---------------CCC--CC-CCCcHHHHHHHHHHHhhccCCCCCCCCChHHHHH
Q 011360 426 PEWLRKVMNS-KNPS-RAI---------------DPR--LP-GNGYEKKMLHVLKIAYICTLHDPEERPNSQYVRC 481 (487)
Q Consensus 426 ~~~~~~~~~~-~~~~-~~~---------------~~~--~~-~~~~~~~~~~l~~li~~cl~~~P~~RPs~~~il~ 481 (487)
.+........ +.+. ..+ ... .+ .......+..+.+++.+||+.+|++|||+.+++.
T Consensus 213 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~ 288 (330)
T cd07834 213 IDQLNLIVEVLGTPSEEDLKFITSEKARNYLKSLPKKPKKPLSKLFPGASPEAIDLLEKMLVFDPKKRITADEALA 288 (330)
T ss_pred HHHHHHHHHhcCCCChhHhhhccccchhhHHhhcccCCcchhHHhcccCCHHHHHHHHHHccCChhhCCCHHHHHh
Confidence 1111111110 0000 000 000 00 0001123467889999999999999999999986
No 367
>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the
Probab=100.00 E-value=4.4e-34 Score=270.28 Aligned_cols=239 Identities=26% Similarity=0.350 Sum_probs=191.2
Q ss_pred cccccceeEEEEEecCCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCCCCccccceEEecCCe
Q 011360 200 IGSGGCGEVYKAELPGSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQIRHRNILPLLAHMVRPDC 279 (487)
Q Consensus 200 lg~G~~g~v~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~ 279 (487)
||.|+||.||++... .++..+|+|.+... ..........+..|+.++++++||||+++++.+..++.
T Consensus 1 lg~G~~~~v~~~~~~-~~~~~~~~k~~~~~------------~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~ 67 (250)
T cd05123 1 LGKGSFGKVLLVRKK-DTGKLYAMKVLKKK------------KIIKRKEVEHTLTERNILSRINHPFIVKLHYAFQTEEK 67 (250)
T ss_pred CCCCCceEEEEEEEC-CCCcEEEEEEeehh------------hhcchHHHHHHHHHHHHHHHcCCCcHHHHHHHeecCCe
Confidence 699999999999764 46889999987431 11222345678889999999999999999999999999
Q ss_pred eEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCCEEEeccCCc
Q 011360 280 HLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVLLNDDMEACISDLGLA 359 (487)
Q Consensus 280 ~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nill~~~~~~kl~DFg~s 359 (487)
.|++|||+++++|.+++.. ...+++..+..++.|++.||.|| |+.+++|+||+|+||+++.++.++|+|||.+
T Consensus 68 ~~~v~e~~~~~~L~~~l~~----~~~l~~~~~~~~~~qi~~~l~~l---h~~~~~H~~l~p~ni~~~~~~~~~l~d~~~~ 140 (250)
T cd05123 68 LYLVLEYAPGGELFSHLSK----EGRFSEERARFYAAEIVLALEYL---HSLGIIYRDLKPENILLDADGHIKLTDFGLA 140 (250)
T ss_pred eEEEEecCCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHH---HHCCceecCCCcceEEEcCCCcEEEeecCcc
Confidence 9999999999999999975 34689999999999999999999 6688999999999999999999999999998
Q ss_pred cccCCCCceeeEeeecccccccCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCccccCCCCccccHHHHHHHHhcCCCC
Q 011360 360 MAIPDGYTRVLISYVLGTMAYIAPEYFQQPELSEKCDIFSFGMLLISLVRGVPSFVFHQNGEEICSPEWLRKVMNSKNPS 439 (487)
Q Consensus 360 ~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DvwslG~~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 439 (487)
........ ......++..|+|||.+.+..++.++|+||||+++|++++|..||..... ......... . .
T Consensus 141 ~~~~~~~~--~~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~------~~~~~~~~~-~--~ 209 (250)
T cd05123 141 KELSSEGS--RTNTFCGTPEYLAPEVLLGKGYGKAVDWWSLGVLLYEMLTGKPPFYAEDR------KEIYEKILK-D--P 209 (250)
T ss_pred eecccCCC--cccCCcCCccccChHHhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCH------HHHHHHHhc-C--C
Confidence 76544321 12345578899999999888889999999999999999999999943322 222222222 1 1
Q ss_pred CccCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCChH
Q 011360 440 RAIDPRLPGNGYEKKMLHVLKIAYICTLHDPEERPNSQ 477 (487)
Q Consensus 440 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~ 477 (487)
..++..+ ...+.+++.+||..+|++|||+.
T Consensus 210 ~~~~~~~--------~~~l~~~i~~~l~~~p~~R~~~~ 239 (250)
T cd05123 210 LRFPEFL--------SPEARDLISGLLQKDPTKRLGSG 239 (250)
T ss_pred CCCCCCC--------CHHHHHHHHHHhcCCHhhCCCcc
Confidence 1122222 24588999999999999999994
No 368
>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=2.9e-35 Score=296.32 Aligned_cols=257 Identities=21% Similarity=0.308 Sum_probs=208.3
Q ss_pred ccccccccccccceeEEEEEecCCC---CceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCCCCccc
Q 011360 193 CFASLEKIGSGGCGEVYKAELPGSN---GKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQIRHRNILP 269 (487)
Q Consensus 193 ~~~~~~~lg~G~~g~v~~~~~~~~~---~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~ 269 (487)
.....++||+|+||+||+|.|-... +.+||||++.. .........++.|+-+|.++.|||+++
T Consensus 697 elkk~kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~~--------------~t~~~~s~e~LdeAl~masldHpnl~R 762 (1177)
T KOG1025|consen 697 ELKKDKVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLIE--------------FTSPKASIELLDEALRMASLDHPNLLR 762 (1177)
T ss_pred hhhhhceeccccceeEEeeeEecCCceecceeEEEEeec--------------cCCchhhHHHHHHHHHHhcCCCchHHH
Confidence 3566789999999999999884331 35789998743 333445678899999999999999999
Q ss_pred cceEEecCCeeEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCC
Q 011360 270 LLAHMVRPDCHLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVLLNDDM 349 (487)
Q Consensus 270 l~~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nill~~~~ 349 (487)
+++++.... +.||++|+++|+|.+|++. ....+.....+.|..||++||.|| |.+++|||||.++|+|+..-.
T Consensus 763 LLgvc~~s~-~qlvtq~mP~G~LlDyvr~---hr~~igsq~lLnw~~QIAkgM~YL---e~qrlVHrdLaaRNVLVksP~ 835 (1177)
T KOG1025|consen 763 LLGVCMLST-LQLVTQLMPLGCLLDYVRE---HRDNIGSQDLLNWCYQIAKGMKYL---EEQRLVHRDLAARNVLVKSPN 835 (1177)
T ss_pred Hhhhcccch-HHHHHHhcccchHHHHHHH---hhccccHHHHHHHHHHHHHHHHHH---HhcchhhhhhhhhheeecCCC
Confidence 999998766 7899999999999999985 356678889999999999999999 788899999999999999999
Q ss_pred CEEEeccCCccccCCCCceeeEeeecccccccCCcccCCCCCCchhHHHHHHHHHHHHHh-CCCCccccCCCCccccHHH
Q 011360 350 EACISDLGLAMAIPDGYTRVLISYVLGTMAYIAPEYFQQPELSEKCDIFSFGMLLISLVR-GVPSFVFHQNGEEICSPEW 428 (487)
Q Consensus 350 ~~kl~DFg~s~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DvwslG~~l~ellt-g~~pf~~~~~~~~~~~~~~ 428 (487)
.+|+.|||+++.+.............-++.|||-|.+....|+.++||||||+++||++| |..|+.+... +.
T Consensus 836 hvkitdfgla~ll~~d~~ey~~~~gK~pikwmale~i~~~~~thqSDVWsfGVtiWElmTFGa~Py~gi~~-------~e 908 (1177)
T KOG1025|consen 836 HVKITDFGLAKLLAPDEKEYSAPGGKVPIKWMALESIRIRKYTHQSDVWSFGVTIWELMTFGAKPYDGIPA-------EE 908 (1177)
T ss_pred eEEEEecchhhccCcccccccccccccCcHHHHHHHhhccCCCchhhhhhhhhhHHHHHhcCCCccCCCCH-------HH
Confidence 999999999998877655544444456789999999999999999999999999999999 8889844322 22
Q ss_pred HHHHHhcCCCCCccCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCChHHHHHHHhhh
Q 011360 429 LRKVMNSKNPSRAIDPRLPGNGYEKKMLHVLKIAYICTLHDPEERPNSQYVRCRLSQL 486 (487)
Q Consensus 429 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~~il~~L~~l 486 (487)
+...++.+.- -.-+| -...++..++.+||..|+..||+++++...+.++
T Consensus 909 I~dlle~geR-LsqPp--------iCtiDVy~~mvkCwmid~~~rp~fkel~~~fs~~ 957 (1177)
T KOG1025|consen 909 IPDLLEKGER-LSQPP--------ICTIDVYMVMVKCWMIDADSRPTFKELAEEFSRM 957 (1177)
T ss_pred hhHHHhcccc-CCCCC--------CccHHHHHHHHHHhccCcccCccHHHHHHHHHHH
Confidence 3333332211 11122 2335799999999999999999999999988764
No 369
>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK
Probab=100.00 E-value=1.4e-34 Score=287.03 Aligned_cols=257 Identities=26% Similarity=0.386 Sum_probs=193.7
Q ss_pred ccccccccccccccceeEEEEEecCCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCCCCcccc
Q 011360 191 EDCFASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQIRHRNILPL 270 (487)
Q Consensus 191 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l 270 (487)
.++|.+...||.|++|.||+|... .++..||+|++... .........+.+|+.+++.+.||||+++
T Consensus 14 ~~~y~~~~~ig~g~~g~vy~~~~~-~~~~~~aiK~~~~~-------------~~~~~~~~~~~~E~~~l~~l~h~~iv~~ 79 (343)
T cd07851 14 PDRYQNLSPVGSGAYGQVCSAFDT-KTGRKVAIKKLSRP-------------FQSAIHAKRTYRELRLLKHMDHENVIGL 79 (343)
T ss_pred cCceEEEEEeccCCceEEEEEEEC-CCCcEEEEEecccc-------------cchhhHHHHHHHHHHHHHhccCCCHHHH
Confidence 346999999999999999999753 57889999987321 1112234556789999999999999999
Q ss_pred ceEEecCCe------eEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEE
Q 011360 271 LAHMVRPDC------HLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVL 344 (487)
Q Consensus 271 ~~~~~~~~~------~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nil 344 (487)
++++...+. .++|+||+ +++|.+++.. ..+++..+..++.|++.||.|| |+.||+||||+|+||+
T Consensus 80 ~~~~~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~-----~~l~~~~~~~~~~ql~~aL~~L---H~~gi~H~dlkp~Nil 150 (343)
T cd07851 80 LDVFTPASSLEDFQDVYLVTHLM-GADLNNIVKC-----QKLSDDHIQFLVYQILRGLKYI---HSAGIIHRDLKPSNIA 150 (343)
T ss_pred HHHhhccccccccccEEEEEecC-CCCHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHH---HHCCeecCCCCHHHeE
Confidence 998776554 89999999 7799998863 4689999999999999999999 7788999999999999
Q ss_pred eCCCCCEEEeccCCccccCCCCceeeEeeecccccccCCcccCC-CCCCchhHHHHHHHHHHHHHhCCCCccccCCCCcc
Q 011360 345 LNDDMEACISDLGLAMAIPDGYTRVLISYVLGTMAYIAPEYFQQ-PELSEKCDIFSFGMLLISLVRGVPSFVFHQNGEEI 423 (487)
Q Consensus 345 l~~~~~~kl~DFg~s~~~~~~~~~~~~~~~~gt~~y~aPE~l~~-~~~~~~~DvwslG~~l~elltg~~pf~~~~~~~~~ 423 (487)
++.++.++|+|||++....... ....++..|+|||.+.+ ..++.++||||||+++|++++|..||......
T Consensus 151 l~~~~~~kL~dfg~~~~~~~~~-----~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGv~l~elltg~~pf~~~~~~--- 222 (343)
T cd07851 151 VNEDCELKILDFGLARHTDDEM-----TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGKTLFPGSDHI--- 222 (343)
T ss_pred ECCCCCEEEccccccccccccc-----cCCcccccccCHHHHhCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChH---
Confidence 9999999999999997654331 23457889999998865 36789999999999999999999999543221
Q ss_pred ccHHHHHHHHhc-CCCCCccCCC---------------CCCCC----cHHHHHHHHHHHhhccCCCCCCCCChHHHHH
Q 011360 424 CSPEWLRKVMNS-KNPSRAIDPR---------------LPGNG----YEKKMLHVLKIAYICTLHDPEERPNSQYVRC 481 (487)
Q Consensus 424 ~~~~~~~~~~~~-~~~~~~~~~~---------------~~~~~----~~~~~~~l~~li~~cl~~~P~~RPs~~~il~ 481 (487)
.....+... ..+...+... ..... ....+..+.+++.+||+.+|++|||+.+|+.
T Consensus 223 ---~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~l~dli~~~l~~~P~~Rpt~~ell~ 297 (343)
T cd07851 223 ---DQLKRIMNLVGTPDEELLQKISSESARNYIQSLPQMPKKDFKEVFSGANPLAIDLLEKMLVLDPDKRITAAEALA 297 (343)
T ss_pred ---HHHHHHHHhcCCCCHHHHhhccchhHHHHHHhccccCCCCHHHHhccCCHHHHHHHHHhCCCChhhCCCHHHHhc
Confidence 111111110 0000000000 00000 0112467889999999999999999999875
No 370
>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13
Probab=100.00 E-value=2.3e-34 Score=285.43 Aligned_cols=255 Identities=25% Similarity=0.346 Sum_probs=188.8
Q ss_pred cccccccccccccceeEEEEEecCCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCCCCccccc
Q 011360 192 DCFASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQIRHRNILPLL 271 (487)
Q Consensus 192 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~ 271 (487)
++|.+.+.||.|+||.||+|.. ..+|..||+|++... .........+.+|+.+++.++||||++++
T Consensus 15 ~~y~~~~~ig~g~~g~v~~~~~-~~~~~~vaiK~~~~~-------------~~~~~~~~~~~~e~~~l~~l~h~niv~~~ 80 (342)
T cd07879 15 ERYTSLKQVGSGAYGSVCSAID-KRTGEKVAIKKLSRP-------------FQSEIFAKRAYRELTLLKHMQHENVIGLL 80 (342)
T ss_pred cceEEEEEeeecCCeEEEEEEe-CCCCcEEEEEEecCc-------------cccccchhHHHHHHHHHHhcCCCCccchh
Confidence 4699999999999999999975 457899999987321 11122334577899999999999999999
Q ss_pred eEEecCC------eeEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEe
Q 011360 272 AHMVRPD------CHLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVLL 345 (487)
Q Consensus 272 ~~~~~~~------~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nill 345 (487)
+++.... ..++||||+. .+|..++ +..+++..+..++.|++.||.|| |+.|++||||+|+||++
T Consensus 81 ~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~------~~~~~~~~~~~~~~qi~~aL~~L---H~~~i~H~dlkp~NIll 150 (342)
T cd07879 81 DVFTSAVSGDEFQDFYLVMPYMQ-TDLQKIM------GHPLSEDKVQYLVYQMLCGLKYI---HSAGIIHRDLKPGNLAV 150 (342)
T ss_pred heecccccCCCCceEEEEecccc-cCHHHHH------cCCCCHHHHHHHHHHHHHHHHHH---HHCCcccCCCCHHHEEE
Confidence 9887543 4589999995 4776654 24588999999999999999999 77889999999999999
Q ss_pred CCCCCEEEeccCCccccCCCCceeeEeeecccccccCCcccCC-CCCCchhHHHHHHHHHHHHHhCCCCccccCCCCccc
Q 011360 346 NDDMEACISDLGLAMAIPDGYTRVLISYVLGTMAYIAPEYFQQ-PELSEKCDIFSFGMLLISLVRGVPSFVFHQNGEEIC 424 (487)
Q Consensus 346 ~~~~~~kl~DFg~s~~~~~~~~~~~~~~~~gt~~y~aPE~l~~-~~~~~~~DvwslG~~l~elltg~~pf~~~~~~~~~~ 424 (487)
+.++.+||+|||++....... ....++..|+|||.+.+ ..++.++||||||+++|||++|+.||......
T Consensus 151 ~~~~~~kL~dfg~~~~~~~~~-----~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slGvil~el~~g~~pf~~~~~~---- 221 (342)
T cd07879 151 NEDCELKILDFGLARHADAEM-----TGYVVTRWYRAPEVILNWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYL---- 221 (342)
T ss_pred CCCCCEEEeeCCCCcCCCCCC-----CCceeeecccChhhhcCccccCchHHHHHHHHHHHHHHhCCCCCCCCCHH----
Confidence 999999999999987653322 23457889999999876 46889999999999999999999999543211
Q ss_pred cHHHHHHHHhc-CCCCC-------------cc--CCCCCCC----CcHHHHHHHHHHHhhccCCCCCCCCChHHHHH
Q 011360 425 SPEWLRKVMNS-KNPSR-------------AI--DPRLPGN----GYEKKMLHVLKIAYICTLHDPEERPNSQYVRC 481 (487)
Q Consensus 425 ~~~~~~~~~~~-~~~~~-------------~~--~~~~~~~----~~~~~~~~l~~li~~cl~~~P~~RPs~~~il~ 481 (487)
......... +.+.. .. .+..+.. ........+.+++.+||+.||++|||+.+++.
T Consensus 222 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~~~~e~l~ 296 (342)
T cd07879 222 --DQLTQILKVTGVPGPEFVQKLEDKAAKSYIKSLPKYPRKDFSTLFPKASPQAVDLLEKMLELDVDKRLTATEALE 296 (342)
T ss_pred --HHHHHHHHhcCCCCHHHHHHhcccchHHHHhhcCCcccchHHHHhcCCCHHHHHHHHHHcCCChhhCcCHHHHhc
Confidence 111111110 00000 00 0000000 00112346889999999999999999999984
No 371
>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1e-35 Score=277.49 Aligned_cols=259 Identities=20% Similarity=0.285 Sum_probs=202.0
Q ss_pred ccccccccccccccceeEEEEEecCCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCC--CC---
Q 011360 191 EDCFASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQIR--HR--- 265 (487)
Q Consensus 191 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~--hp--- 265 (487)
.++|.++..+|+|.||+|-.+ ++..++..||||+++ .-....+..+-|+.++.++. .|
T Consensus 88 ~~Ry~i~~~lGeGtFGkV~ec-~D~~~~~~vAlKIik----------------~V~kYreAa~iEi~vLqki~~~DP~g~ 150 (415)
T KOG0671|consen 88 TNRYEIVDLLGEGTFGKVVEC-WDRETKEHVALKIIK----------------NVDKYREAALIEIEVLQKINESDPNGK 150 (415)
T ss_pred ccceehhhhhcCCcccceEEE-eecCCCceehHHHHH----------------HHHHHhhHHHHHHHHHHHHHhcCCCCc
Confidence 467999999999999999999 455669999999762 22334556677899999883 23
Q ss_pred -CccccceEEecCCeeEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEE
Q 011360 266 -NILPLLAHMVRPDCHLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVL 344 (487)
Q Consensus 266 -nIv~l~~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nil 344 (487)
-+|.+.++|+..++.|||+|.+ |-|+.++|.. ++-.+++...+..++.|+++++++| |+.+++|-||||+|||
T Consensus 151 ~rcv~m~~wFdyrghiCivfell-G~S~~dFlk~--N~y~~fpi~~ir~m~~QL~~sv~fL---h~~kl~HTDLKPENIL 224 (415)
T KOG0671|consen 151 FRCVQMRDWFDYRGHICIVFELL-GLSTFDFLKE--NNYIPFPIDHIRHMGYQLLESVAFL---HDLKLTHTDLKPENIL 224 (415)
T ss_pred eEEEeeehhhhccCceEEEEecc-ChhHHHHhcc--CCccccchHHHHHHHHHHHHHHHHH---HhcceeecCCChheEE
Confidence 3677888899999999999998 7799999976 5667899999999999999999999 8888999999999999
Q ss_pred eCC--------------------CCCEEEeccCCccccCCCCceeeEeeecccccccCCcccCCCCCCchhHHHHHHHHH
Q 011360 345 LND--------------------DMEACISDLGLAMAIPDGYTRVLISYVLGTMAYIAPEYFQQPELSEKCDIFSFGMLL 404 (487)
Q Consensus 345 l~~--------------------~~~~kl~DFg~s~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DvwslG~~l 404 (487)
+.+ +..++|+|||.++.-.... +..+.|..|.|||++.+-.++..+||||+||+|
T Consensus 225 fvss~~~~~~~~k~~~~~~r~~ks~~I~vIDFGsAtf~~e~h-----s~iVsTRHYRAPEViLgLGwS~pCDvWSiGCIL 299 (415)
T KOG0671|consen 225 FVSSEYFKTYNPKKKVCFIRPLKSTAIKVIDFGSATFDHEHH-----STIVSTRHYRAPEVILGLGWSQPCDVWSIGCIL 299 (415)
T ss_pred EeccceEEEeccCCccceeccCCCcceEEEecCCcceeccCc-----ceeeeccccCCchheeccCcCCccCceeeeeEE
Confidence 942 3348999999997654433 456689999999999999999999999999999
Q ss_pred HHHHhCCCCccccCCCCccccHHHHHHHHhcCCCCCccCCC-----------------------------CCC----CCc
Q 011360 405 ISLVRGVPSFVFHQNGEEICSPEWLRKVMNSKNPSRAIDPR-----------------------------LPG----NGY 451 (487)
Q Consensus 405 ~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------------------~~~----~~~ 451 (487)
+|+.||...|...++.+... .+..+ -+..|..++... .|- ...
T Consensus 300 ~ElytG~~LFqtHen~EHLa---MMerI-lGp~P~~mi~r~~~~Kyf~~~rldw~e~~~~~~~k~v~~~ckpl~~~~~~~ 375 (415)
T KOG0671|consen 300 VELYTGETLFQTHENLEHLA---MMERI-LGPIPSRMIKKTRKEKYFRRGRLDWPEVSSKGKSKYVFEPCKPLKKYMLQD 375 (415)
T ss_pred EEeeccceecccCCcHHHHH---HHHHh-hCCCcHHHhhhhhhHhhhhcccccCccccccccchhhhcCCccHHHHhccC
Confidence 99999999997776433221 11111 112222221111 000 123
Q ss_pred HHHHHHHHHHHhhccCCCCCCCCChHHHHH
Q 011360 452 EKKMLHVLKIAYICTLHDPEERPNSQYVRC 481 (487)
Q Consensus 452 ~~~~~~l~~li~~cl~~~P~~RPs~~~il~ 481 (487)
......|++|+.+||..||.+|+|+.|++.
T Consensus 376 d~e~~~LfDLl~~mL~fDP~~RiTl~EAL~ 405 (415)
T KOG0671|consen 376 DLEHVQLFDLLRRMLEFDPARRITLREALS 405 (415)
T ss_pred cHHHhHHHHHHHHHHccCccccccHHHHhc
Confidence 355667999999999999999999999875
No 372
>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the
Probab=100.00 E-value=2.3e-34 Score=277.32 Aligned_cols=258 Identities=26% Similarity=0.354 Sum_probs=194.8
Q ss_pred cccccccccccceeEEEEEecCCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCCCCccccceE
Q 011360 194 FASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQIRHRNILPLLAH 273 (487)
Q Consensus 194 ~~~~~~lg~G~~g~v~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~ 273 (487)
|...+.||.|++|.||+|+. ..+++.+|+|.+.... ........+..|+.+++.++||||++++++
T Consensus 1 y~~~~~ig~g~~~~vy~~~~-~~~~~~~~iK~~~~~~-------------~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~ 66 (282)
T cd07829 1 YEKLEKLGEGTYGVVYKARD-KKTGEIVALKKIRLDN-------------EEEGIPSTALREISLLKELKHPNIVKLLDV 66 (282)
T ss_pred CeeehcccccCcceEEEeee-cCCCcEEEEEEecccc-------------ccccccHHHHHHHHHHHhcCCCCHHHHHhh
Confidence 45678899999999999975 4568999999884311 122234556789999999999999999999
Q ss_pred EecCCeeEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCCEEE
Q 011360 274 MVRPDCHLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVLLNDDMEACI 353 (487)
Q Consensus 274 ~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nill~~~~~~kl 353 (487)
+...+..++||||++ ++|.+++... ...+++..+..++.|++.||.|| |+.|++||||+|+||+++.++.++|
T Consensus 67 ~~~~~~~~~v~e~~~-~~l~~~i~~~---~~~~~~~~~~~~~~~i~~~l~~L---H~~~i~H~~l~~~ni~~~~~~~~~l 139 (282)
T cd07829 67 IHTERKLYLVFEYCD-MDLKKYLDKR---PGPLSPNLIKSIMYQLLRGLAYC---HSHRILHRDLKPQNILINRDGVLKL 139 (282)
T ss_pred hhcCCceEEEecCcC-cCHHHHHHhh---ccCCCHHHHHHHHHHHHHHHHHH---HHCCcccCCCChheEEEcCCCCEEE
Confidence 999999999999996 5899998752 24689999999999999999999 6778999999999999999999999
Q ss_pred eccCCccccCCCCceeeEeeecccccccCCcccCCC-CCCchhHHHHHHHHHHHHHhCCCCccccCCCCccccHHHHHHH
Q 011360 354 SDLGLAMAIPDGYTRVLISYVLGTMAYIAPEYFQQP-ELSEKCDIFSFGMLLISLVRGVPSFVFHQNGEEICSPEWLRKV 432 (487)
Q Consensus 354 ~DFg~s~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~-~~~~~~DvwslG~~l~elltg~~pf~~~~~~~~~~~~~~~~~~ 432 (487)
+|||.+......... .....++..|+|||.+.+. .++.++||||||+++|++++|.+||...... +.....
T Consensus 140 ~d~g~~~~~~~~~~~--~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~------~~~~~~ 211 (282)
T cd07829 140 ADFGLARAFGIPLRT--YTHEVVTLWYRAPEILLGSKHYSTAVDIWSVGCIFAEMITGKPLFPGDSEI------DQLFKI 211 (282)
T ss_pred ecCCcccccCCCccc--cCccccCcCcCChHHhcCCcCCCccccHHHHHHHHHHHHhCCCCCCCccHH------HHHHHH
Confidence 999998766443221 1223457789999998766 7899999999999999999999999543321 111111
Q ss_pred Hh---cC----------C--CCCccCCCCCC----CCcHHHHHHHHHHHhhccCCCCCCCCChHHHHH
Q 011360 433 MN---SK----------N--PSRAIDPRLPG----NGYEKKMLHVLKIAYICTLHDPEERPNSQYVRC 481 (487)
Q Consensus 433 ~~---~~----------~--~~~~~~~~~~~----~~~~~~~~~l~~li~~cl~~~P~~RPs~~~il~ 481 (487)
.. .. . ..... +.... .........+.+++.+||..+|++||++.+++.
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~ 278 (282)
T cd07829 212 FQILGTPTEESWPGVTKLPDYKPTF-PKFPPKDLEKVLPRLDPEGIDLLSKMLQYNPAKRISAKEALK 278 (282)
T ss_pred HHHhCCCcHHHHHhhcccccccccc-cccCccchHHhcccccHHHHHHHHHhhccCcccCCCHHHHhh
Confidence 00 00 0 00000 00000 011122467999999999999999999999875
No 373
>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi
Probab=100.00 E-value=1.5e-34 Score=286.87 Aligned_cols=259 Identities=24% Similarity=0.379 Sum_probs=188.8
Q ss_pred cccccccccccccceeEEEEEecCCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCCCCccccc
Q 011360 192 DCFASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQIRHRNILPLL 271 (487)
Q Consensus 192 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~ 271 (487)
.+|.+.+.||.|+||.||+|.. ..++..||+|++... .....+.+.+|+.+++.++||||++++
T Consensus 5 ~~y~~~~~Lg~g~~g~vy~~~~-~~~~~~v~iK~i~~~---------------~~~~~~~~~~Ei~~l~~l~h~~i~~~~ 68 (342)
T cd07854 5 SRYMDLRPLGCGSNGLVFSAVD-SDCDKRVAVKKIVLT---------------DPQSVKHALREIKIIRRLDHDNIVKVY 68 (342)
T ss_pred cceEEEEEecCCCCEEEEEEEE-CCCCcEEEEEEEecC---------------CCchHHHHHHHHHHHHhcCCCcchhhH
Confidence 5699999999999999999964 567899999987431 112345677899999999999999999
Q ss_pred eEEecC--------------CeeEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecC
Q 011360 272 AHMVRP--------------DCHLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGD 337 (487)
Q Consensus 272 ~~~~~~--------------~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~D 337 (487)
+++... ...|+||||++ ++|.+++.. ..+++..++.++.|++.||.|| |+.|++|||
T Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~~~~-----~~l~~~~~~~~~~qi~~aL~~L---H~~givH~d 139 (342)
T cd07854 69 EVLGPSGSDLTEDVGSLTELNSVYIVQEYME-TDLANVLEQ-----GPLSEEHARLFMYQLLRGLKYI---HSANVLHRD 139 (342)
T ss_pred hhhcccccccccccccccccceEEEEeeccc-ccHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHH---HhCCcccCC
Confidence 876543 35789999996 588888752 4688999999999999999999 677899999
Q ss_pred CCCCCEEeC-CCCCEEEeccCCccccCCCCcee-eEeeecccccccCCcccCC-CCCCchhHHHHHHHHHHHHHhCCCCc
Q 011360 338 IKPRNVLLN-DDMEACISDLGLAMAIPDGYTRV-LISYVLGTMAYIAPEYFQQ-PELSEKCDIFSFGMLLISLVRGVPSF 414 (487)
Q Consensus 338 lkp~Nill~-~~~~~kl~DFg~s~~~~~~~~~~-~~~~~~gt~~y~aPE~l~~-~~~~~~~DvwslG~~l~elltg~~pf 414 (487)
|||+||+++ .++.++|+|||.+.......... ......++..|+|||.+.. ..++.++|||||||++|+|++|..||
T Consensus 140 ikp~Nili~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf 219 (342)
T cd07854 140 LKPANVFINTEDLVLKIGDFGLARIVDPHYSHKGYLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKPLF 219 (342)
T ss_pred CCHHHEEEcCCCceEEECCcccceecCCccccccccccccccccccCHHHHhCccccCchhhHHHHHHHHHHHHhCCCCC
Confidence 999999997 45678999999987653321111 1122357889999998754 46788999999999999999999999
Q ss_pred cccCCCCccccHHHHHHHHhcCC--------------CCC----ccCCCCC-CCCcHHHHHHHHHHHhhccCCCCCCCCC
Q 011360 415 VFHQNGEEICSPEWLRKVMNSKN--------------PSR----AIDPRLP-GNGYEKKMLHVLKIAYICTLHDPEERPN 475 (487)
Q Consensus 415 ~~~~~~~~~~~~~~~~~~~~~~~--------------~~~----~~~~~~~-~~~~~~~~~~l~~li~~cl~~~P~~RPs 475 (487)
...... +.......... +.. ...+..+ .........++.+++.+||..||.+|||
T Consensus 220 ~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t 293 (342)
T cd07854 220 AGAHEL------EQMQLILESVPVVREEDRNELLNVIPSFVRNDGGEPRRPLRDLLPGVNPEALDFLEQILTFNPMDRLT 293 (342)
T ss_pred CCCCHH------HHHHHHHHhcCCCChHHhhhhhhhhhhhhhhcccccCCCHHHHccCCCHHHHHHHHHHhCCCchhccC
Confidence 533210 11111100000 000 0000000 0001123356889999999999999999
Q ss_pred hHHHHH
Q 011360 476 SQYVRC 481 (487)
Q Consensus 476 ~~~il~ 481 (487)
+.+++.
T Consensus 294 ~~ell~ 299 (342)
T cd07854 294 AEEALM 299 (342)
T ss_pred HHHHhC
Confidence 999874
No 374
>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co
Probab=100.00 E-value=3.7e-34 Score=282.84 Aligned_cols=262 Identities=23% Similarity=0.314 Sum_probs=189.2
Q ss_pred ccccccccccccceeEEEEEecCCC--CceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccC-CCCCccc
Q 011360 193 CFASLEKIGSGGCGEVYKAELPGSN--GKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQI-RHRNILP 269 (487)
Q Consensus 193 ~~~~~~~lg~G~~g~v~~~~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpnIv~ 269 (487)
+|.+.+.||.|+||.||++... .+ +..||+|++... .........+.+|+.++.++ .||||++
T Consensus 1 ~y~~~~~lg~G~~g~vy~~~~~-~~~~~~~~aiK~~~~~-------------~~~~~~~~~~~~E~~~l~~l~~h~~iv~ 66 (332)
T cd07857 1 RYELIKELGQGAYGIVCSARNA-ETSEEETVAIKKITNV-------------FSKKILAKRALRELKLLRHFRGHKNITC 66 (332)
T ss_pred CceEEEEccccCCeEEEEEEeC-CCCcCceEEEEEeccc-------------cccchhHHHHHHHHHHHHHhcCCCChhe
Confidence 3778899999999999999764 34 788999987321 11122345667899999988 6999999
Q ss_pred cceEEec----CCeeEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEe
Q 011360 270 LLAHMVR----PDCHLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVLL 345 (487)
Q Consensus 270 l~~~~~~----~~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nill 345 (487)
+++.... ....|++|+|+. ++|.+++.. ...+++..+..++.|++.||.|| |+.|++||||||+||++
T Consensus 67 ~~~~~~~~~~~~~~~~~~~e~~~-~~L~~~l~~----~~~~~~~~~~~~~~qi~~aL~~L---H~~givH~dlkp~Nili 138 (332)
T cd07857 67 LYDMDIVFPGNFNELYLYEELME-ADLHQIIRS----GQPLTDAHFQSFIYQILCGLKYI---HSANVLHRDLKPGNLLV 138 (332)
T ss_pred eeeeeeeccccCCcEEEEEeccc-CCHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHH---HhCCcccCCCCHHHeEE
Confidence 9986543 245788999984 689888853 46789999999999999999999 77889999999999999
Q ss_pred CCCCCEEEeccCCccccCCCCce--eeEeeecccccccCCcccCC-CCCCchhHHHHHHHHHHHHHhCCCCccccCCCCc
Q 011360 346 NDDMEACISDLGLAMAIPDGYTR--VLISYVLGTMAYIAPEYFQQ-PELSEKCDIFSFGMLLISLVRGVPSFVFHQNGEE 422 (487)
Q Consensus 346 ~~~~~~kl~DFg~s~~~~~~~~~--~~~~~~~gt~~y~aPE~l~~-~~~~~~~DvwslG~~l~elltg~~pf~~~~~~~~ 422 (487)
+.++.+||+|||++......... .......|++.|+|||.+.+ ..++.++||||||+++|+|++|.+||........
T Consensus 139 ~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Di~slGv~l~~l~~g~~pf~~~~~~~~ 218 (332)
T cd07857 139 NADCELKICDFGLARGFSENPGENAGFMTEYVATRWYRAPEIMLSFQSYTKAIDVWSVGCILAELLGRKPVFKGKDYVDQ 218 (332)
T ss_pred cCCCCEEeCcCCCceecccccccccccccCcccCccccCcHHHhCCCCCCcHHHHHHHHHHHHHHHhCCcCCCCCCHHHH
Confidence 99999999999999865432211 11123468999999998765 4689999999999999999999999954321000
Q ss_pred ---------cccHHHHHHHHh----------cCCCCCccCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCChHHHHH
Q 011360 423 ---------ICSPEWLRKVMN----------SKNPSRAIDPRLPGNGYEKKMLHVLKIAYICTLHDPEERPNSQYVRC 481 (487)
Q Consensus 423 ---------~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~~il~ 481 (487)
....+....... ...+...+.. ........+.+++.+||+.+|++|||+.+++.
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~li~~~l~~~P~~R~t~~~ll~ 291 (332)
T cd07857 219 LNQILQVLGTPDEETLSRIGSPKAQNYIRSLPNIPKKPFES-----IFPNANPLALDLLEKLLAFDPTKRISVEEALE 291 (332)
T ss_pred HHHHHHHhCCCCHHHHHhhhhhhHHHHHHhccccCCcchHh-----hCCCCCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence 000001100000 0000000000 01112356889999999999999999999864
No 375
>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481
Probab=100.00 E-value=5.9e-34 Score=304.40 Aligned_cols=149 Identities=26% Similarity=0.388 Sum_probs=129.5
Q ss_pred cccccccccccccceeEEEEEecCCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCCCCccccc
Q 011360 192 DCFASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQIRHRNILPLL 271 (487)
Q Consensus 192 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~ 271 (487)
+.|.+.+.||.|+||.||+|.. ..+++.||||++... ..........+..|+.++..++||||++++
T Consensus 4 ~~y~i~~~LG~G~fg~Vy~a~~-~~~~~~vAiKvi~~~------------~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~ 70 (669)
T cd05610 4 EEFVIVKPISRGAFGKVYLGRK-KNNSKLYAVKVVKKA------------DMINKNMVHQVQAERDALALSKSPFIVHLY 70 (669)
T ss_pred CCEEEEEEEecCCCeEEEEEEE-CCCCcEEEEEEEehh------------hccCHHHHHHHHHHHHHHHhcCCCCcCeEE
Confidence 4699999999999999999975 457899999988431 111233456778899999999999999999
Q ss_pred eEEecCCeeEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCCE
Q 011360 272 AHMVRPDCHLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVLLNDDMEA 351 (487)
Q Consensus 272 ~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nill~~~~~~ 351 (487)
+++...+.+|+||||+.|++|.+++.. ...+++..++.++.||+.||.|| |.+||+||||||+|||++.++.+
T Consensus 71 ~~~~~~~~~~lVmEy~~g~~L~~li~~----~~~l~~~~~~~i~~qil~aL~yL---H~~gIiHrDLKP~NILl~~~g~v 143 (669)
T cd05610 71 YSLQSANNVYLVMEYLIGGDVKSLLHI----YGYFDEEMAVKYISEVALALDYL---HRHGIIHRDLKPDNMLISNEGHI 143 (669)
T ss_pred EEEEECCEEEEEEeCCCCCCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHH---HhCCEEeCCccHHHEEEcCCCCE
Confidence 999999999999999999999999864 34678889999999999999999 67799999999999999999999
Q ss_pred EEeccCCcc
Q 011360 352 CISDLGLAM 360 (487)
Q Consensus 352 kl~DFg~s~ 360 (487)
||+|||+++
T Consensus 144 kL~DFGls~ 152 (669)
T cd05610 144 KLTDFGLSK 152 (669)
T ss_pred EEEeCCCCc
Confidence 999999885
No 376
>PTZ00024 cyclin-dependent protein kinase; Provisional
Probab=100.00 E-value=4.5e-34 Score=282.61 Aligned_cols=276 Identities=22% Similarity=0.266 Sum_probs=193.8
Q ss_pred ccccc-ccccccccceeEEEEEecCCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCCCCcccc
Q 011360 192 DCFAS-LEKIGSGGCGEVYKAELPGSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQIRHRNILPL 270 (487)
Q Consensus 192 ~~~~~-~~~lg~G~~g~v~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l 270 (487)
++|.. .+.||.|+||.||+|.. ..+++.||+|++............. ...........+.+|+.+++.++||||+++
T Consensus 8 ~ry~~~~~~ig~G~~g~vy~~~~-~~~~~~vaiK~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~ 85 (335)
T PTZ00024 8 ERYIQKGAHLGEGTYGKVEKAYD-TLTGKIVAIKKVKIIEISNDVTKDR-QLVGMCGIHFTTLRELKIMNEIKHENIMGL 85 (335)
T ss_pred cchhhhhhcccCCCceeEEEEEE-CCCCCeEEEEEeeccccccccccch-hhhcccccchhHHHHHHHHHhCCCcceeee
Confidence 34654 57799999999999974 4578999999884321110000000 000000112246789999999999999999
Q ss_pred ceEEecCCeeEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCC
Q 011360 271 LAHMVRPDCHLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVLLNDDME 350 (487)
Q Consensus 271 ~~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nill~~~~~ 350 (487)
++++...+..++||||+. |+|.+++.. ...+++.....++.|++.||.|| |+.|++|+||+|+||+++.++.
T Consensus 86 ~~~~~~~~~~~lv~e~~~-~~l~~~l~~----~~~~~~~~~~~~~~ql~~aL~~L---H~~~i~H~dl~~~nill~~~~~ 157 (335)
T PTZ00024 86 VDVYVEGDFINLVMDIMA-SDLKKVVDR----KIRLTESQVKCILLQILNGLNVL---HKWYFMHRDLSPANIFINSKGI 157 (335)
T ss_pred eEEEecCCcEEEEEeccc-cCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHH---HhCCeecccccHHHeEECCCCC
Confidence 999999999999999996 689888864 45689999999999999999999 7788999999999999999999
Q ss_pred EEEeccCCccccCCCC------------ceeeEeeecccccccCCcccCCC-CCCchhHHHHHHHHHHHHHhCCCCcccc
Q 011360 351 ACISDLGLAMAIPDGY------------TRVLISYVLGTMAYIAPEYFQQP-ELSEKCDIFSFGMLLISLVRGVPSFVFH 417 (487)
Q Consensus 351 ~kl~DFg~s~~~~~~~------------~~~~~~~~~gt~~y~aPE~l~~~-~~~~~~DvwslG~~l~elltg~~pf~~~ 417 (487)
++|+|||++....... .........+++.|+|||.+.+. .++.++|+||||+++|+|++|.+||...
T Consensus 158 ~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~ 237 (335)
T PTZ00024 158 CKIADFGLARRYGYPPYSDTLSKDETMQRREEMTSKVVTLWYRAPELLMGAEKYHFAVDMWSVGCIFAELLTGKPLFPGE 237 (335)
T ss_pred EEECCccceeecccccccccccccccccccccccccccccCCCCChhcccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 9999999987654111 00111223467889999998764 4789999999999999999999999544
Q ss_pred CCCCccccHHHHHHHHhcCCCCCccC------------CCCCC---CCcHHHHHHHHHHHhhccCCCCCCCCChHHHHH
Q 011360 418 QNGEEICSPEWLRKVMNSKNPSRAID------------PRLPG---NGYEKKMLHVLKIAYICTLHDPEERPNSQYVRC 481 (487)
Q Consensus 418 ~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~---~~~~~~~~~l~~li~~cl~~~P~~RPs~~~il~ 481 (487)
.... ....+....... ....+. ...+. ......+.++.+++.+||+.+|++|||+.+++.
T Consensus 238 ~~~~---~~~~i~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~ 312 (335)
T PTZ00024 238 NEID---QLGRIFELLGTP-NEDNWPQAKKLPLYTEFTPRKPKDLKTIFPNASDDAIDLLQSLLKLNPLERISAKEALK 312 (335)
T ss_pred CHHH---HHHHHHHHhCCC-chhhCcchhhcccccccCcCCcccHHHhCcCCChHHHHHHHHHcCCCchhccCHHHHhc
Confidence 3211 001111111000 000000 00000 001122456889999999999999999999875
No 377
>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.6e-35 Score=284.19 Aligned_cols=245 Identities=22% Similarity=0.304 Sum_probs=199.3
Q ss_pred ccccccccccccceeEEEEEecCCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCCCCccccce
Q 011360 193 CFASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQIRHRNILPLLA 272 (487)
Q Consensus 193 ~~~~~~~lg~G~~g~v~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~ 272 (487)
++.++..||.||||.|-+++.+.. ...+|+|.+ ++.........+++..|-.+|...+.|.||++|.
T Consensus 421 dl~~iaTLGvGgFGRVELV~~~~~-~~~fAlKil------------kK~hIVdtkQqeHv~sEr~Im~~~~s~fIvrLYr 487 (732)
T KOG0614|consen 421 DLKRIATLGVGGFGRVELVKVNSQ-KATFALKIL------------KKKHIVDTKQQEHVFSERNIMMECRSDFIVRLYR 487 (732)
T ss_pred hhhhhhhcccCccceEEEEEeccc-chHHHHHHH------------hHhhccchhHHHHHHhHHHHHHhcCchHHHHHHH
Confidence 467788899999999999987533 224677754 3444455667788899999999999999999999
Q ss_pred EEecCCeeEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCCEE
Q 011360 273 HMVRPDCHLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVLLNDDMEAC 352 (487)
Q Consensus 273 ~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nill~~~~~~k 352 (487)
.|.+...+|++||-|-||.|+..|.. .+.++..+...++..+++|+.|| |++|||+|||||+|++++.+|-+|
T Consensus 488 Tfrd~kyvYmLmEaClGGElWTiLrd----Rg~Fdd~tarF~~acv~EAfeYL---H~k~iIYRDLKPENllLd~~Gy~K 560 (732)
T KOG0614|consen 488 TFRDSKYVYMLMEACLGGELWTILRD----RGSFDDYTARFYVACVLEAFEYL---HRKGIIYRDLKPENLLLDNRGYLK 560 (732)
T ss_pred HhccchhhhhhHHhhcCchhhhhhhh----cCCcccchhhhhHHHHHHHHHHH---HhcCceeccCChhheeeccCCceE
Confidence 99999999999999999999999976 67899999999999999999999 788899999999999999999999
Q ss_pred EeccCCccccCCCCceeeEeeecccccccCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCccccCCCCccccHHHHHHH
Q 011360 353 ISDLGLAMAIPDGYTRVLISYVLGTMAYIAPEYFQQPELSEKCDIFSFGMLLISLVRGVPSFVFHQNGEEICSPEWLRKV 432 (487)
Q Consensus 353 l~DFg~s~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DvwslG~~l~elltg~~pf~~~~~~~~~~~~~~~~~~ 432 (487)
|.|||+++.+..+... -+++|||.|.|||++.+...+.++|.||||+++|||++|.+||.+.++... ...+
T Consensus 561 LVDFGFAKki~~g~KT---wTFcGTpEYVAPEIILnKGHD~avDyWaLGIli~ELL~G~pPFs~~dpmkt------Yn~I 631 (732)
T KOG0614|consen 561 LVDFGFAKKIGSGRKT---WTFCGTPEYVAPEIILNKGHDRAVDYWALGILIYELLTGSPPFSGVDPMKT------YNLI 631 (732)
T ss_pred EeehhhHHHhccCCce---eeecCCcccccchhhhccCcchhhHHHHHHHHHHHHHcCCCCCCCCchHHH------HHHH
Confidence 9999999988766443 468899999999999999999999999999999999999999966554221 1111
Q ss_pred HhcCCCCCccCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCC
Q 011360 433 MNSKNPSRAIDPRLPGNGYEKKMLHVLKIAYICTLHDPEERPN 475 (487)
Q Consensus 433 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs 475 (487)
+.+-.. -.++ ..+.....+++.+....+|.+|..
T Consensus 632 LkGid~-i~~P--------r~I~k~a~~Lik~LCr~~P~ERLG 665 (732)
T KOG0614|consen 632 LKGIDK-IEFP--------RRITKTATDLIKKLCRDNPTERLG 665 (732)
T ss_pred Hhhhhh-hhcc--------cccchhHHHHHHHHHhcCcHhhhc
Confidence 211111 0111 122345778888888889999976
No 378
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3e-34 Score=284.49 Aligned_cols=240 Identities=22% Similarity=0.299 Sum_probs=191.3
Q ss_pred ccccccccccccccceeEEEEEecCCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccC-CCCCccc
Q 011360 191 EDCFASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQI-RHRNILP 269 (487)
Q Consensus 191 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpnIv~ 269 (487)
.+.|.....+|.|+|+.|..+. ...+++..++|++... .....+|+.++... +||||++
T Consensus 321 ~~~y~~~~~~~~gs~s~~~~~~-~~~t~~~~~vkii~~~-------------------~~~~~~e~~~~~~~~~h~niv~ 380 (612)
T KOG0603|consen 321 TESYEFREELGEGSFSAVKYCE-SSPTDQEPAVKIISKR-------------------ADDNQDEIPISLLVRDHPNIVK 380 (612)
T ss_pred chhhccccccCCCCccceeeee-ccccccchhheecccc-------------------ccccccccchhhhhcCCCccee
Confidence 4568888889999999999996 4568889999987321 12223455444433 8999999
Q ss_pred cceEEecCCeeEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEe-CCC
Q 011360 270 LLAHMVRPDCHLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVLL-NDD 348 (487)
Q Consensus 270 l~~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nill-~~~ 348 (487)
+.+++.+..+.|+|||.+.|+-|.+.+.. ...+. ..+..|+.+|+.++.|| |++|+|||||||+|||+ +..
T Consensus 381 ~~~v~~~~~~~~~v~e~l~g~ell~ri~~----~~~~~-~e~~~w~~~lv~Av~~L---H~~gvvhRDLkp~NIL~~~~~ 452 (612)
T KOG0603|consen 381 SHDVYEDGKEIYLVMELLDGGELLRRIRS----KPEFC-SEASQWAAELVSAVDYL---HEQGVVHRDLKPGNILLDGSA 452 (612)
T ss_pred ecceecCCceeeeeehhccccHHHHHHHh----cchhH-HHHHHHHHHHHHHHHHH---HhcCeeecCCChhheeecCCC
Confidence 99999999999999999999988777653 22333 67778999999999999 77889999999999999 688
Q ss_pred CCEEEeccCCccccCCCCceeeEeeecccccccCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCccccCCCCccccHHH
Q 011360 349 MEACISDLGLAMAIPDGYTRVLISYVLGTMAYIAPEYFQQPELSEKCDIFSFGMLLISLVRGVPSFVFHQNGEEICSPEW 428 (487)
Q Consensus 349 ~~~kl~DFg~s~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DvwslG~~l~elltg~~pf~~~~~~~~~~~~~~ 428 (487)
++++|+|||.++..... +.+.+-|..|.|||++....|+.++||||||++||+|++|+.||.....+ ..
T Consensus 453 g~lrltyFG~a~~~~~~-----~~tp~~t~~y~APEvl~~~~yt~acD~WSLGvlLy~ML~G~tp~~~~P~~------~e 521 (612)
T KOG0603|consen 453 GHLRLTYFGFWSELERS-----CDTPALTLQYVAPEVLAIQEYTEACDWWSLGVLLYEMLTGRTLFAAHPAG------IE 521 (612)
T ss_pred CcEEEEEechhhhCchh-----hcccchhhcccChhhhccCCCCcchhhHHHHHHHHHHHhCCCccccCCch------HH
Confidence 99999999999877655 23445688999999999999999999999999999999999999766553 11
Q ss_pred HHHHHhcCCCCCccCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCChHHHHH
Q 011360 429 LRKVMNSKNPSRAIDPRLPGNGYEKKMLHVLKIAYICTLHDPEERPNSQYVRC 481 (487)
Q Consensus 429 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~~il~ 481 (487)
+...+..+.. ....+....+|+.+||+.||.+||++.++..
T Consensus 522 i~~~i~~~~~------------s~~vS~~AKdLl~~LL~~dP~~Rl~~~~i~~ 562 (612)
T KOG0603|consen 522 IHTRIQMPKF------------SECVSDEAKDLLQQLLQVDPALRLGADEIGA 562 (612)
T ss_pred HHHhhcCCcc------------ccccCHHHHHHHHHhccCChhhCcChhhhcc
Confidence 2222222211 1344567889999999999999999999864
No 379
>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]
Probab=100.00 E-value=3.3e-35 Score=282.93 Aligned_cols=245 Identities=23% Similarity=0.365 Sum_probs=198.8
Q ss_pred cccccccceeEEEEEecCCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCCCCccccceEEecC
Q 011360 198 EKIGSGGCGEVYKAELPGSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQIRHRNILPLLAHMVRP 277 (487)
Q Consensus 198 ~~lg~G~~g~v~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~ 277 (487)
+.||.|.||+||-|+++ .+|+.||||++..- ........++++|+.++.++.||.||.+--.|.++
T Consensus 570 evLGSGQFG~VYgg~hR-ktGrdVAvKvIdKl-------------rFp~kqesqlR~EVaILq~l~HPGiV~le~M~ET~ 635 (888)
T KOG4236|consen 570 EVLGSGQFGTVYGGKHR-KTGRDVAVKVIDKL-------------RFPTKQESQLRNEVAILQNLHHPGIVNLECMFETP 635 (888)
T ss_pred hhccCCcceeeecceec-ccCceeeeeeeecc-------------cCCCchHHHHHHHHHHHHhcCCCCeeEEEEeecCC
Confidence 67999999999999864 69999999998431 22233347889999999999999999999999999
Q ss_pred CeeEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCC---CCEEEe
Q 011360 278 DCHLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVLLNDD---MEACIS 354 (487)
Q Consensus 278 ~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nill~~~---~~~kl~ 354 (487)
+.+++|||-+ .|+....+-. ...+.+++..-..+..||+.||.|| |.+||+|+||||+|||+... .++|||
T Consensus 636 ervFVVMEKl-~GDMLEMILS--sEkgRL~er~TkFlvtQIL~ALr~L---H~knIvHCDLKPENVLLas~~~FPQvKlC 709 (888)
T KOG4236|consen 636 ERVFVVMEKL-HGDMLEMILS--SEKGRLPERITKFLVTQILVALRYL---HFKNIVHCDLKPENVLLASASPFPQVKLC 709 (888)
T ss_pred ceEEEEehhh-cchHHHHHHH--hhcccchHHHHHHHHHHHHHHHHHh---hhcceeeccCCchheeeccCCCCCceeec
Confidence 9999999999 5566555533 3457789999999999999999999 77889999999999999753 479999
Q ss_pred ccCCccccCCCCceeeEeeecccccccCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCccccCCCCccccHHHHHHHHh
Q 011360 355 DLGLAMAIPDGYTRVLISYVLGTMAYIAPEYFQQPELSEKCDIFSFGMLLISLVRGVPSFVFHQNGEEICSPEWLRKVMN 434 (487)
Q Consensus 355 DFg~s~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DvwslG~~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~ 434 (487)
|||+++..+...-. ...+|||.|+|||++....|...-|+||.|+++|--++|..||....+ + .+. +.+
T Consensus 710 DFGfARiIgEksFR---rsVVGTPAYLaPEVLrnkGyNrSLDMWSVGVIiYVsLSGTFPFNEdEd---I--ndQ---IQN 778 (888)
T KOG4236|consen 710 DFGFARIIGEKSFR---RSVVGTPAYLAPEVLRNKGYNRSLDMWSVGVIIYVSLSGTFPFNEDED---I--NDQ---IQN 778 (888)
T ss_pred cccceeecchhhhh---hhhcCCccccCHHHHhhccccccccceeeeEEEEEEecccccCCCccc---h--hHH---hhc
Confidence 99999988665433 567899999999999999999999999999999999999999943322 1 111 111
Q ss_pred cCCCCCccCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCChHHHH
Q 011360 435 SKNPSRAIDPRLPGNGYEKKMLHVLKIAYICTLHDPEERPNSQYVR 480 (487)
Q Consensus 435 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~~il 480 (487)
... -.|.....+++...+++|...|+..-.+|-|...-+
T Consensus 779 AaF-------MyPp~PW~eis~~AidlIn~LLqVkm~kRysvdk~l 817 (888)
T KOG4236|consen 779 AAF-------MYPPNPWSEISPEAIDLINNLLQVKMRKRYSVDKSL 817 (888)
T ss_pred ccc-------ccCCCchhhcCHHHHHHHHHHHHHHHHHhcchHhhc
Confidence 111 145566777888899999999999999998887644
No 380
>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins. Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha
Probab=100.00 E-value=9.4e-34 Score=266.26 Aligned_cols=220 Identities=20% Similarity=0.232 Sum_probs=172.6
Q ss_pred ccceeEEEEEecCCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCCCCccccceEEecCCeeEE
Q 011360 203 GGCGEVYKAELPGSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQIRHRNILPLLAHMVRPDCHLL 282 (487)
Q Consensus 203 G~~g~v~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~l 282 (487)
|.+|+||++. +..+++.||+|.+.... ....|...+....||||+++++++...+..++
T Consensus 4 g~~~~v~~~~-~~~~~~~~~~K~i~~~~--------------------~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l 62 (237)
T cd05576 4 GVIDKVLLVM-DTRTQQTFILKGLRKSS--------------------EYSRERLTIIPHCVPNMVCLHKYIVSEDSVFL 62 (237)
T ss_pred cccceEEEEE-EccCCcEEEEEeecchh--------------------hhhhHHHHHHhcCCCceeehhhheecCCeEEE
Confidence 8999999996 45688999999884310 11223334445579999999999999999999
Q ss_pred EEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCCEEEeccCCcccc
Q 011360 283 VYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVLLNDDMEACISDLGLAMAI 362 (487)
Q Consensus 283 v~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nill~~~~~~kl~DFg~s~~~ 362 (487)
+|||+++|+|.+++.. ...+++..+..++.|++.||.|| |++|++||||||+||+++.++.++++|||.+...
T Consensus 63 v~e~~~~~~L~~~l~~----~~~l~~~~~~~~~~ql~~~l~~l---H~~~i~H~dlkp~Nil~~~~~~~~l~df~~~~~~ 135 (237)
T cd05576 63 VLQHAEGGKLWSHISK----FLNIPEECVKRWAAEMVVALDAL---HREGIVCRDLNPNNILLDDRGHIQLTYFSRWSEV 135 (237)
T ss_pred EEecCCCCCHHHHHHH----hcCCCHHHHHHHHHHHHHHHHHH---HhCCeeccCCCHHHEEEcCCCCEEEecccchhcc
Confidence 9999999999999865 34589999999999999999999 6788999999999999999999999999987655
Q ss_pred CCCCceeeEeeecccccccCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCccccCCCCccccHHHHHHHHhcCCCCCcc
Q 011360 363 PDGYTRVLISYVLGTMAYIAPEYFQQPELSEKCDIFSFGMLLISLVRGVPSFVFHQNGEEICSPEWLRKVMNSKNPSRAI 442 (487)
Q Consensus 363 ~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DvwslG~~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 442 (487)
.... ....++..|+|||.+.+..++.++|+||+|+++|+|++|..||....... ....
T Consensus 136 ~~~~-----~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~~~~~~~~~~-------------~~~~---- 193 (237)
T cd05576 136 EDSC-----DGEAVENMYCAPEVGGISEETEACDWWSLGAILFELLTGKTLVECHPSGI-------------NTHT---- 193 (237)
T ss_pred cccc-----ccCCcCccccCCcccCCCCCCchhhHHHHHHHHHHHHHCcchhhcCchhc-------------cccc----
Confidence 4322 22345778999999988889999999999999999999998873221100 0000
Q ss_pred CCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCCh
Q 011360 443 DPRLPGNGYEKKMLHVLKIAYICTLHDPEERPNS 476 (487)
Q Consensus 443 ~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~ 476 (487)
...++. .....+.+++.+||+.||++|||+
T Consensus 194 ~~~~~~----~~~~~~~~li~~~l~~dp~~R~~~ 223 (237)
T cd05576 194 TLNIPE----WVSEEARSLLQQLLQFNPTERLGA 223 (237)
T ss_pred ccCCcc----cCCHHHHHHHHHHccCCHHHhcCC
Confidence 001221 123568899999999999999997
No 381
>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]
Probab=100.00 E-value=5.9e-34 Score=265.68 Aligned_cols=264 Identities=20% Similarity=0.263 Sum_probs=211.1
Q ss_pred hccccccccccccccceeEEEEEecCCC----CceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCCC
Q 011360 190 KEDCFASLEKIGSGGCGEVYKAELPGSN----GKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQIRHR 265 (487)
Q Consensus 190 ~~~~~~~~~~lg~G~~g~v~~~~~~~~~----~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp 265 (487)
..+++.....+.+|.||.||+|.|...+ .+.|-+|.+ ....++..+..++.|...+..+.||
T Consensus 282 ~r~Rv~l~~llqEGtFGri~~gI~~eEdt~n~~q~v~vKTv--------------k~~AS~iQv~~~L~es~lly~~sH~ 347 (563)
T KOG1024|consen 282 QRCRVRLSCLLQEGTFGRIYRGIWREEDTYNDCQEVLVKTV--------------KQHASQIQVNLLLQESMLLYGASHP 347 (563)
T ss_pred hhhheechhhhhcCchhheeeeeecccCCcchHHHHHHHHH--------------HhcccHHHHHHHHHHHHHHhcCcCC
Confidence 4456788888999999999999875322 223334432 1233455677889999999999999
Q ss_pred CccccceEEec-CCeeEEEEEecCCCCHHHHHhhhh----cCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCC
Q 011360 266 NILPLLAHMVR-PDCHLLVYEFMKNGSLQDILDDVS----RGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKP 340 (487)
Q Consensus 266 nIv~l~~~~~~-~~~~~lv~E~~~~gsL~~~l~~~~----~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp 340 (487)
|+..+.+++.. ....++++.++.-|+|..||...+ .+.+.++..+...++.|++.|++|| |++|+||.||.+
T Consensus 348 nll~V~~V~ie~~~~P~V~y~~~~~gNLK~FL~~Cr~~~~~~aqtvtt~qlV~masQla~am~hl---h~~~ViHkDiAa 424 (563)
T KOG1024|consen 348 NLLSVLGVSIEDYATPFVLYPATGVGNLKSFLQICRGDDPSYAQTVTTIQLVLMASQLAMAMEHL---HNHGVIHKDIAA 424 (563)
T ss_pred CccceeEEEeeccCcceEEEeccCcchHHHHHHHhccCCCccccchhHHHHHHHHHHHHHHHHHH---HhcCcccchhhh
Confidence 99999998765 466788999999999999997332 2345677788899999999999999 888999999999
Q ss_pred CCEEeCCCCCEEEeccCCccccCCCCceeeEeeecccccccCCcccCCCCCCchhHHHHHHHHHHHHHh-CCCCccccCC
Q 011360 341 RNVLLNDDMEACISDLGLAMAIPDGYTRVLISYVLGTMAYIAPEYFQQPELSEKCDIFSFGMLLISLVR-GVPSFVFHQN 419 (487)
Q Consensus 341 ~Nill~~~~~~kl~DFg~s~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DvwslG~~l~ellt-g~~pf~~~~~ 419 (487)
+|++|++..++||+|=.+++.+-+............+..||+||.+.+..|+.++|+||||+++|||+| |+.||.
T Consensus 425 RNCvIdd~LqVkltDsaLSRDLFP~DYhcLGDnEnRPvkWMslEal~n~~yssasDvWsfGVllWELmtlg~~Pya---- 500 (563)
T KOG1024|consen 425 RNCVIDDQLQVKLTDSALSRDLFPGDYHCLGDNENRPVKWMSLEALQNSHYSSASDVWSFGVLLWELMTLGKLPYA---- 500 (563)
T ss_pred hcceehhheeEEeccchhccccCcccccccCCCCCCcccccCHHHHhhhhhcchhhhHHHHHHHHHHHhcCCCCcc----
Confidence 999999999999999999998877766655555667899999999999999999999999999999999 799993
Q ss_pred CCccccHHHHHHHHhcCCCCCccCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCChHHHHHHHhhh
Q 011360 420 GEEICSPEWLRKVMNSKNPSRAIDPRLPGNGYEKKMLHVLKIAYICTLHDPEERPNSQYVRCRLSQL 486 (487)
Q Consensus 420 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~~il~~L~~l 486 (487)
+++..+....+.++.+..+.+ +++.+++.+|..||...|++||+++++..-|.++
T Consensus 501 --eIDPfEm~~ylkdGyRlaQP~----------NCPDeLf~vMacCWallpeeRPsf~Qlv~cLseF 555 (563)
T KOG1024|consen 501 --EIDPFEMEHYLKDGYRLAQPF----------NCPDELFTVMACCWALLPEERPSFSQLVICLSEF 555 (563)
T ss_pred --ccCHHHHHHHHhccceecCCC----------CCcHHHHHHHHHHHhcCcccCCCHHHHHHHHHHH
Confidence 444444444444444443322 2335699999999999999999999999988765
No 382
>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=100.00 E-value=1.6e-34 Score=242.81 Aligned_cols=260 Identities=24% Similarity=0.353 Sum_probs=195.9
Q ss_pred ccccccccccccceeEEEEEecCCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCCCCccccce
Q 011360 193 CFASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQIRHRNILPLLA 272 (487)
Q Consensus 193 ~~~~~~~lg~G~~g~v~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~ 272 (487)
.|...++||+|.+|+||+|+ +..+++.||+|++..... .+..-....+|+.+++.++|.|||++++
T Consensus 3 ~ydkmekigegtygtvfkar-n~~t~eivalkrvrlddd-------------degvpssalreicllkelkhknivrl~d 68 (292)
T KOG0662|consen 3 KYDKMEKIGEGTYGTVFKAR-NRETHEIVALKRVRLDDD-------------DEGVPSSALREICLLKELKHKNIVRLHD 68 (292)
T ss_pred chHHHHhhcCCcceeeEecc-cCCccceEEEEEEeccCC-------------CCCCcHHHHHHHHHHHHhhhcceeehhh
Confidence 47778899999999999997 557899999999865321 1122335678999999999999999999
Q ss_pred EEecCCeeEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCCEE
Q 011360 273 HMVRPDCHLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVLLNDDMEAC 352 (487)
Q Consensus 273 ~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nill~~~~~~k 352 (487)
+...+..+-+|+||| ..+|..+... -++.++.+.++.++.|+++||.++ |++++.|||+||.|.|++.+|.+|
T Consensus 69 vlhsdkkltlvfe~c-dqdlkkyfds---lng~~d~~~~rsfmlqllrgl~fc---hshnvlhrdlkpqnllin~ngelk 141 (292)
T KOG0662|consen 69 VLHSDKKLTLVFEFC-DQDLKKYFDS---LNGDLDPEIVRSFMLQLLRGLGFC---HSHNVLHRDLKPQNLLINRNGELK 141 (292)
T ss_pred hhccCceeEEeHHHh-hHHHHHHHHh---cCCcCCHHHHHHHHHHHHhhhhhh---hhhhhhhccCCcceEEeccCCcEE
Confidence 999999999999999 5589888875 356788999999999999999999 777899999999999999999999
Q ss_pred EeccCCccccCCCCceeeEeeecccccccCCcccCCC-CCCchhHHHHHHHHHHHHHh-CCCCccccCCCCccccHHHHH
Q 011360 353 ISDLGLAMAIPDGYTRVLISYVLGTMAYIAPEYFQQP-ELSEKCDIFSFGMLLISLVR-GVPSFVFHQNGEEICSPEWLR 430 (487)
Q Consensus 353 l~DFg~s~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~-~~~~~~DvwslG~~l~ellt-g~~pf~~~~~~~~~~~~~~~~ 430 (487)
++|||+++.++.... ..+..+.|.+|.+|.++.+. -|+...|+||.||++.|+.. |.+.|.+.+... .+.
T Consensus 142 ladfglarafgipvr--cysaevvtlwyrppdvlfgakly~tsidmwsagcifaelanagrplfpg~dvdd------qlk 213 (292)
T KOG0662|consen 142 LADFGLARAFGIPVR--CYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDD------QLK 213 (292)
T ss_pred ecccchhhhcCCceE--eeeceeeeeeccCcceeeeeehhccchHhhhcchHHHHHhhcCCCCCCCCcHHH------HHH
Confidence 999999998765432 22445679999999998875 68999999999999999998 677775543321 122
Q ss_pred HHHh-cCCCCCc-c-----------CCCCCCC-CcH----HHHHHHHHHHhhccCCCCCCCCChHHHHH
Q 011360 431 KVMN-SKNPSRA-I-----------DPRLPGN-GYE----KKMLHVLKIAYICTLHDPEERPNSQYVRC 481 (487)
Q Consensus 431 ~~~~-~~~~~~~-~-----------~~~~~~~-~~~----~~~~~l~~li~~cl~~~P~~RPs~~~il~ 481 (487)
+++. -+.+.+. . -|..|.. ... .....=.+++...+.-+|.+|.+++..++
T Consensus 214 rif~~lg~p~ed~wps~t~lpdyk~yp~ypattswsqivp~lns~grdllqkll~cnp~qrisaeaalq 282 (292)
T KOG0662|consen 214 RIFRLLGTPTEDQWPSMTKLPDYKPYPIYPATTSWSQIVPKLNSTGRDLLQKLLKCNPAQRISAEAALQ 282 (292)
T ss_pred HHHHHhCCCccccCCccccCCCCcccCCccccchHHHHhhhhcchhHHHHHHHhccCcccccCHHHHhc
Confidence 2211 1111110 0 0111110 111 11222346666777779999999998765
No 383
>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]
Probab=100.00 E-value=4.8e-34 Score=245.16 Aligned_cols=225 Identities=23% Similarity=0.354 Sum_probs=182.8
Q ss_pred hhhccccccccccccccceeEEEEEecCCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhcc-CCCCC
Q 011360 188 LKKEDCFASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQ-IRHRN 266 (487)
Q Consensus 188 ~~~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~-l~hpn 266 (487)
....+....+..||+|++|.|-+-++ ..+|...|+|.+... .......+.+.|+.+..+ ..+|.
T Consensus 42 eV~ad~L~~i~elGrGayG~vekmrh-~~sg~imAvKri~~t--------------vn~q~q~r~L~dldi~~r~~~CPf 106 (282)
T KOG0984|consen 42 EVPADDLVGIEELGRGAYGVVEKMRH-IQSGTIMAVKRIRAT--------------VNSQEQKRLLMDLDIIMRTVDCPF 106 (282)
T ss_pred ccchhhhhhhhhhcCCccchhhheee-ccCCeEEEEeeehhh--------------cChHHHHHHHHhhhhhccCCCCCe
Confidence 34455677888999999999988875 468999999998432 223455677788877554 48999
Q ss_pred ccccceEEecCCeeEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeC
Q 011360 267 ILPLLAHMVRPDCHLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVLLN 346 (487)
Q Consensus 267 Iv~l~~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nill~ 346 (487)
+|.+||.......++|.||.| ..||..+-...-..+..+++..+-+|+..+++||.|||+ ...++|||+||+|||++
T Consensus 107 ~V~FyGa~~regdvwIcME~M-~tSldkfy~~v~~~g~~ipE~vlGkIa~Svv~al~~L~~--kL~vIHRDvKPsNiLIn 183 (282)
T KOG0984|consen 107 TVHFYGALFREGDVWICMELM-DTSLDKFYRKVLKKGGTIPEDVLGKIAVSVVHALEFLHS--KLSVIHRDVKPSNILIN 183 (282)
T ss_pred EEEeehhhhccccEEEeHHHh-hhhHHHHHHHHHhcCCcCchHHhhHhHHHHHHHHHHHHH--HhhhhhccCCcceEEEc
Confidence 999999999999999999999 569999887777778999999999999999999999984 45699999999999999
Q ss_pred CCCCEEEeccCCccccCCCCceeeEeeecccccccCCcccC----CCCCCchhHHHHHHHHHHHHHhCCCCccccCCCCc
Q 011360 347 DDMEACISDLGLAMAIPDGYTRVLISYVLGTMAYIAPEYFQ----QPELSEKCDIFSFGMLLISLVRGVPSFVFHQNGEE 422 (487)
Q Consensus 347 ~~~~~kl~DFg~s~~~~~~~~~~~~~~~~gt~~y~aPE~l~----~~~~~~~~DvwslG~~l~elltg~~pf~~~~~~~~ 422 (487)
.+|++|+||||.+-.+.++-.. +...|...|||||.+. ...|+.++||||||+++.||.+++.||.. .
T Consensus 184 ~~GqVKiCDFGIsG~L~dSiAk---t~daGCkpYmaPEri~~e~n~~gY~vksDvWSLGItmiElA~lr~PY~~-----w 255 (282)
T KOG0984|consen 184 YDGQVKICDFGISGYLVDSIAK---TMDAGCKPYMAPERINPELNQKGYSVKSDVWSLGITMIEMAILRFPYES-----W 255 (282)
T ss_pred cCCcEEEcccccceeehhhhHH---HHhcCCCccCChhhcCcccCcccceeehhhhhhhhhhhhhhhccccccc-----c
Confidence 9999999999999766554332 2245888999999875 33799999999999999999999999943 3
Q ss_pred cccHHHHHHHHhcCCC
Q 011360 423 ICSPEWLRKVMNSKNP 438 (487)
Q Consensus 423 ~~~~~~~~~~~~~~~~ 438 (487)
.+..+.+.+++....|
T Consensus 256 ~tpF~qLkqvVeep~P 271 (282)
T KOG0984|consen 256 GTPFQQLKQVVEEPSP 271 (282)
T ss_pred CCHHHHHHHHhcCCCC
Confidence 3445566666655444
No 384
>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=6.3e-34 Score=289.62 Aligned_cols=252 Identities=26% Similarity=0.392 Sum_probs=203.6
Q ss_pred ccccccccccccccceeEEEEEecCCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccC-CCCCccc
Q 011360 191 EDCFASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQI-RHRNILP 269 (487)
Q Consensus 191 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpnIv~ 269 (487)
.+.|++...+|.|.+|+||+++. ..++...|+|+... ....-+.+..|..++..+ .|||++.
T Consensus 18 ~d~~ei~evig~Gtygkv~k~k~-~~~~~~aa~kI~~~----------------~~d~deEiE~eynil~~~~~hpnv~~ 80 (953)
T KOG0587|consen 18 ADIFEIIEVIGNGTYGKVYKGRH-VKTGQLAAIKIMDP----------------TEDEEEEIELEYNMLKKYSHHPNVAT 80 (953)
T ss_pred CCccEEEEEEeeccceeEEEEee-eecCceeeeEeecC----------------CccccHHHHHHHHHHHhccCCCCcce
Confidence 45689999999999999999974 46888899998733 122334566788888877 8999999
Q ss_pred cceEEec-----CCeeEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEE
Q 011360 270 LLAHMVR-----PDCHLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVL 344 (487)
Q Consensus 270 l~~~~~~-----~~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nil 344 (487)
+||++.. ++.++||||||.|||..|+++... +..+.|..+..|++.++.||.+| |.+.++|||+|-.|||
T Consensus 81 fyg~~~k~~~~~~DqLWLVMEfC~gGSVTDLVKn~~--g~rl~E~~IaYI~re~lrgl~HL---H~nkviHRDikG~NiL 155 (953)
T KOG0587|consen 81 FYGAFIKKDPGNGDQLWLVMEFCGGGSVTDLVKNTK--GNRLKEEWIAYILREILRGLAHL---HNNKVIHRDIKGQNVL 155 (953)
T ss_pred EEEEEEEecCCCCCeEEEEeeccCCccHHHHHhhhc--ccchhhHHHHHHHHHHHHHHHHH---hhcceeeecccCceEE
Confidence 9999873 578999999999999999998754 77899999999999999999999 5556999999999999
Q ss_pred eCCCCCEEEeccCCccccCCCCceeeEeeecccccccCCcccCC-----CCCCchhHHHHHHHHHHHHHhCCCCccccCC
Q 011360 345 LNDDMEACISDLGLAMAIPDGYTRVLISYVLGTMAYIAPEYFQQ-----PELSEKCDIFSFGMLLISLVRGVPSFVFHQN 419 (487)
Q Consensus 345 l~~~~~~kl~DFg~s~~~~~~~~~~~~~~~~gt~~y~aPE~l~~-----~~~~~~~DvwslG~~l~elltg~~pf~~~~~ 419 (487)
++.++.|||+|||.+..+...... ..+..|||.|||||++.. ..|+..+|+||||++..||.-|.+|+...-+
T Consensus 156 LT~e~~VKLvDFGvSaQldsT~gr--RnT~iGtP~WMAPEViac~e~~d~tyd~R~D~WsLGITaIEladG~PPl~DmHP 233 (953)
T KOG0587|consen 156 LTENAEVKLVDFGVSAQLDSTVGR--RNTFIGTPYWMAPEVIACDESPDATYDYRSDLWSLGITAIEMAEGAPPLCDMHP 233 (953)
T ss_pred EeccCcEEEeeeeeeeeeeccccc--ccCcCCCcccccceeeecccCCCCCcccccchhhccceeehhcCCCCCccCcch
Confidence 999999999999999887554332 245679999999999863 4688899999999999999999999943322
Q ss_pred CCccccHHHHHHHH-hcCCCCCccCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCChHHHHH
Q 011360 420 GEEICSPEWLRKVM-NSKNPSRAIDPRLPGNGYEKKMLHVLKIAYICTLHDPEERPNSQYVRC 481 (487)
Q Consensus 420 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~~il~ 481 (487)
. +.++ ....|+. .-.......+++.++|..||.+|..+||++.++++
T Consensus 234 m---------raLF~IpRNPPP------kLkrp~kWs~~FndFIs~cL~Kd~e~RP~~~~ll~ 281 (953)
T KOG0587|consen 234 M---------RALFLIPRNPPP------KLKRPKKWSKKFNDFISTCLVKDYEQRPSTEELLK 281 (953)
T ss_pred h---------hhhccCCCCCCc------cccchhhHHHHHHHHHHHHHhhccccCcchhhhcc
Confidence 1 1111 1222211 11235567789999999999999999999998874
No 385
>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1.2e-33 Score=277.31 Aligned_cols=209 Identities=24% Similarity=0.434 Sum_probs=178.8
Q ss_pred cccccccccccceeEEEEEecCCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCCCCccccceE
Q 011360 194 FASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQIRHRNILPLLAH 273 (487)
Q Consensus 194 ~~~~~~lg~G~~g~v~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~ 273 (487)
|..++.||-|+||.|.+++ +..+...||.|.+. +...+....+..+..|-.||+.-..+-||++|..
T Consensus 631 Fvkik~iGvGAFGeV~Lv~-KvDT~~lYAmKTLr------------KaDVl~rnQvaHVKAERDILAEADn~WVVrLyyS 697 (1034)
T KOG0608|consen 631 FVKIKTIGVGAFGEVCLVR-KVDTRALYAMKTLR------------KADVLMRNQVAHVKAERDILAEADNEWVVRLYYS 697 (1034)
T ss_pred eEEEeeecccccceeEEEe-ecchhhHHHHhhhH------------HHHHHhhhhhhhhhhhhhhHhhcCCcceEEEEEE
Confidence 7788899999999999996 45678889999763 3445556677888899999999999999999999
Q ss_pred EecCCeeEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCCEEE
Q 011360 274 MVRPDCHLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVLLNDDMEACI 353 (487)
Q Consensus 274 ~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nill~~~~~~kl 353 (487)
|.+.+++|+||+|++||++-.+|-. -+-|++..++.++..+.+|+++. |..|+|||||||+|||||.+|++||
T Consensus 698 FQDkdnLYFVMdYIPGGDmMSLLIr----mgIFeE~LARFYIAEltcAiesV---HkmGFIHRDiKPDNILIDrdGHIKL 770 (1034)
T KOG0608|consen 698 FQDKDNLYFVMDYIPGGDMMSLLIR----MGIFEEDLARFYIAELTCAIESV---HKMGFIHRDIKPDNILIDRDGHIKL 770 (1034)
T ss_pred eccCCceEEEEeccCCccHHHHHHH----hccCHHHHHHHHHHHHHHHHHHH---HhccceecccCccceEEccCCceee
Confidence 9999999999999999999999875 46788999999999999999999 8889999999999999999999999
Q ss_pred eccCCccccC---------CCCc-------------------------------eeeEeeecccccccCCcccCCCCCCc
Q 011360 354 SDLGLAMAIP---------DGYT-------------------------------RVLISYVLGTMAYIAPEYFQQPELSE 393 (487)
Q Consensus 354 ~DFg~s~~~~---------~~~~-------------------------------~~~~~~~~gt~~y~aPE~l~~~~~~~ 393 (487)
+|||++.-+. .+.. .......+||+.|+|||++....|+.
T Consensus 771 TDFGLCTGfRWTHdskYYq~gdH~RqDSmep~~e~~d~~~~lkvL~~ra~~~h~r~~ahslvgt~nyiapevl~r~g~~q 850 (1034)
T KOG0608|consen 771 TDFGLCTGFRWTHDSKYYQEGDHHRQDSMEPSPEWADISKCLKVLERRAMRQHQRILAHSLVGTPNYIAPEVLARTGYTQ 850 (1034)
T ss_pred eeccccccceeccccccccCCCccccccCCCchhhccccccchHHHHHHHhhhhhhhhhhhcCCCcccChHHhcccCccc
Confidence 9999985331 0000 00012247999999999999999999
Q ss_pred hhHHHHHHHHHHHHHhCCCCccccCCCCc
Q 011360 394 KCDIFSFGMLLISLVRGVPSFVFHQNGEE 422 (487)
Q Consensus 394 ~~DvwslG~~l~elltg~~pf~~~~~~~~ 422 (487)
.+|+||.|++||||+.|++||...++.+.
T Consensus 851 ~cdwws~gvil~em~~g~~pf~~~tp~~t 879 (1034)
T KOG0608|consen 851 LCDWWSVGVILYEMLVGQPPFLADTPGET 879 (1034)
T ss_pred cchhhHhhHHHHHHhhCCCCccCCCCCcc
Confidence 99999999999999999999987776554
No 386
>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.4e-34 Score=271.85 Aligned_cols=264 Identities=24% Similarity=0.354 Sum_probs=202.9
Q ss_pred cccccccccccccceeEEEEEecCCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCCCCccccc
Q 011360 192 DCFASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQIRHRNILPLL 271 (487)
Q Consensus 192 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~ 271 (487)
++|-.+..||+|||+.||+| ++...++.||+|+-..-..+. ...+....+...+|..+-..|.||.||++|
T Consensus 463 ~RYLlLhLLGrGGFSEVyKA-FDl~EqRYvAvKIHqlNK~Wr--------dEKKeNYhKHAcREyrIHKeLDHpRIVKlY 533 (775)
T KOG1151|consen 463 DRYLLLHLLGRGGFSEVYKA-FDLTEQRYVAVKIHQLNKNWR--------DEKKENYHKHACREYRIHKELDHPRIVKLY 533 (775)
T ss_pred HHHHHHHHhccccHHHHHHh-cccchhheeeEeeehhccchh--------hHhhhhHHHHHHHHHhhhhccCcceeeeee
Confidence 45788899999999999999 566778999999764322221 223445677889999999999999999999
Q ss_pred eEEec-CCeeEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeC---C
Q 011360 272 AHMVR-PDCHLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVLLN---D 347 (487)
Q Consensus 272 ~~~~~-~~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nill~---~ 347 (487)
++|.- .+.+|-|+|||+|-+|.-||.. .+.+++..++.|+.||+.||.||.+. ..-|||-||||.|||+- .
T Consensus 534 DyfslDtdsFCTVLEYceGNDLDFYLKQ----hklmSEKEARSIiMQiVnAL~YLNEi-kpPIIHYDLKPgNILLv~Gta 608 (775)
T KOG1151|consen 534 DYFSLDTDSFCTVLEYCEGNDLDFYLKQ----HKLMSEKEARSIIMQIVNALKYLNEI-KPPIIHYDLKPGNILLVNGTA 608 (775)
T ss_pred eeeeeccccceeeeeecCCCchhHHHHh----hhhhhHHHHHHHHHHHHHHHHHHhcc-CCCeeeeccCCccEEEecCcc
Confidence 99874 5778899999999999999975 57789999999999999999999764 45599999999999995 4
Q ss_pred CCCEEEeccCCccccCCCCce-----eeEeeecccccccCCcccCC----CCCCchhHHHHHHHHHHHHHhCCCCccccC
Q 011360 348 DMEACISDLGLAMAIPDGYTR-----VLISYVLGTMAYIAPEYFQQ----PELSEKCDIFSFGMLLISLVRGVPSFVFHQ 418 (487)
Q Consensus 348 ~~~~kl~DFg~s~~~~~~~~~-----~~~~~~~gt~~y~aPE~l~~----~~~~~~~DvwslG~~l~elltg~~pf~~~~ 418 (487)
.|.+||+|||+++.+.+.... ...+...||.+|++||++.- +..+.|+||||.|+++|..+.|+.||....
T Consensus 609 cGeIKITDFGLSKIMdddSy~~vdGmeLTSQgAGTYWYLPPEcFvVgkePPKIsnKVDVWSvGVIFyQClYGrKPFGhnq 688 (775)
T KOG1151|consen 609 CGEIKITDFGLSKIMDDDSYNSVDGMELTSQGAGTYWYLPPECFVVGKEPPKISNKVDVWSVGVIFYQCLYGRKPFGHNQ 688 (775)
T ss_pred cceeEeeecchhhhccCCccCcccceeeecccCceeeecCcceeecCCCCCccccceeeEeeehhhhhhhccCCCCCCch
Confidence 578999999999988665433 23356789999999998753 357899999999999999999999995443
Q ss_pred CCCccccHHHHHHHHhcCCCCCccCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCChHHHH
Q 011360 419 NGEEICSPEWLRKVMNSKNPSRAIDPRLPGNGYEKKMLHVLKIAYICTLHDPEERPNSQYVR 480 (487)
Q Consensus 419 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~~il 480 (487)
...++....-+ +...... +|.. +..+.+...+|++||+..-++|....++.
T Consensus 689 sQQdILqeNTI---lkAtEVq------FP~K--PvVsseAkaFIRRCLaYRKeDR~DV~qLA 739 (775)
T KOG1151|consen 689 SQQDILQENTI---LKATEVQ------FPPK--PVVSSEAKAFIRRCLAYRKEDRIDVQQLA 739 (775)
T ss_pred hHHHHHhhhch---hcceecc------CCCC--CccCHHHHHHHHHHHHhhhhhhhhHHHHc
Confidence 32222111111 1111111 1111 12334578899999999999998887764
No 387
>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1.2e-34 Score=255.84 Aligned_cols=266 Identities=23% Similarity=0.352 Sum_probs=196.3
Q ss_pred ccccccccccccccceeEEEEEecCCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCCCCcccc
Q 011360 191 EDCFASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQIRHRNILPL 270 (487)
Q Consensus 191 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l 270 (487)
...|....++|+|.||.||+|+. +.+|+.||+|++.. . ..+...-....+|+.++..++|+|++.+
T Consensus 16 ~~~yek~~kigqGtfgeVFkAr~-~n~~kkvalkkvlm----------e---neKeGfpitalreikiL~~lkHenv~nl 81 (376)
T KOG0669|consen 16 VSKYEKLAKIGQGTFGEVFKARS-KNTGKKVALKKVLM----------E---NEKEGFPITALREIKILQLLKHENVVNL 81 (376)
T ss_pred chHHHHHHhcCCchHHHHHHHhh-cCccchhHHHHHHH----------h---ccccCCcHHHHHHHHHHHHhcchhHHHH
Confidence 44688889999999999999975 45788899986522 1 1122234456789999999999999999
Q ss_pred ceEEec--------CCeeEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCC
Q 011360 271 LAHMVR--------PDCHLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRN 342 (487)
Q Consensus 271 ~~~~~~--------~~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~N 342 (487)
+..|.. ...+|+||.+|+. +|..+|.. ....++...+.+++.++..||.|+ |+..|+|||+||.|
T Consensus 82 iEic~tk~Tp~~r~r~t~ylVf~~ceh-DLaGlLsn---~~vr~sls~Ikk~Mk~Lm~GL~~i---Hr~kilHRDmKaaN 154 (376)
T KOG0669|consen 82 IEICRTKATPTNRDRATFYLVFDFCEH-DLAGLLSN---RKVRFSLSEIKKVMKGLMNGLYYI---HRNKILHRDMKAAN 154 (376)
T ss_pred HHHHhhccCCcccccceeeeeHHHhhh-hHHHHhcC---ccccccHHHHHHHHHHHHHHHHHH---HHhhHHhhcccHhh
Confidence 987753 2347999999966 88888863 346789999999999999999999 77779999999999
Q ss_pred EEeCCCCCEEEeccCCccccCCCCce--eeEeeecccccccCCcccCCC-CCCchhHHHHHHHHHHHHHhCCCCccccCC
Q 011360 343 VLLNDDMEACISDLGLAMAIPDGYTR--VLISYVLGTMAYIAPEYFQQP-ELSEKCDIFSFGMLLISLVRGVPSFVFHQN 419 (487)
Q Consensus 343 ill~~~~~~kl~DFg~s~~~~~~~~~--~~~~~~~gt~~y~aPE~l~~~-~~~~~~DvwslG~~l~elltg~~pf~~~~~ 419 (487)
+||+.+|.+||+|||+++.+...... ...++.+.|.+|.+||.+.+. .|+.+.|||..||++.||+||.+.+.+.+.
T Consensus 155 vLIt~dgilklADFGlar~fs~~~n~~kprytnrvvTLwYrppEllLG~r~yg~~iDiWgAgCimaeMwtrspimqgnte 234 (376)
T KOG0669|consen 155 VLITKDGILKLADFGLARAFSTSKNVVKPRYTNRVVTLWYRPPELLLGDREYGPPIDIWGAGCIMAEMWTRSPIMQGNTE 234 (376)
T ss_pred EEEcCCceEEeeccccccceecccccCCCCcccceeeeecCCHHHhhcccccCCcchhHhHHHHHHHHHccCccccCChH
Confidence 99999999999999999776433221 112345679999999988765 799999999999999999999998855443
Q ss_pred CCccccHHHHHHHHhcCCCCCccC-------------CCCCCCC---cHHHHH------HHHHHHhhccCCCCCCCCChH
Q 011360 420 GEEICSPEWLRKVMNSKNPSRAID-------------PRLPGNG---YEKKML------HVLKIAYICTLHDPEERPNSQ 477 (487)
Q Consensus 420 ~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~---~~~~~~------~l~~li~~cl~~~P~~RPs~~ 477 (487)
.... .+.....+....+.++ +.++... ..+... +..+++..++..||.+||++.
T Consensus 235 qqql----~~Is~LcGs~tkevWP~~d~lpL~~sie~ePl~~~~~rkv~n~~kp~~kd~~a~dLle~ll~~DP~kR~~ad 310 (376)
T KOG0669|consen 235 QQQL----HLISQLCGSITKEVWPNVDNLPLYQSIELEPLPKGQKRKVKNRLKPYVKDDEALDLLEKLLKLDPTKRIDAD 310 (376)
T ss_pred HHHH----HHHHHHhccCCcccCCCcccchHHHhccCCCCCcchhhhhhhhcccccCChhHHHHHHHHhccCcccCcchH
Confidence 2111 1111222222222221 1122211 112222 577889999999999999999
Q ss_pred HHHH
Q 011360 478 YVRC 481 (487)
Q Consensus 478 ~il~ 481 (487)
+++.
T Consensus 311 ~aln 314 (376)
T KOG0669|consen 311 QALN 314 (376)
T ss_pred hhhc
Confidence 8864
No 388
>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain. Phosphotransferases. Serine or threonine-specific kinase subfamily.
Probab=99.98 E-value=2.1e-31 Score=249.94 Aligned_cols=240 Identities=30% Similarity=0.416 Sum_probs=189.2
Q ss_pred cceeEEEEEecCCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCCCCccccceEEecCCeeEEE
Q 011360 204 GCGEVYKAELPGSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQIRHRNILPLLAHMVRPDCHLLV 283 (487)
Q Consensus 204 ~~g~v~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv 283 (487)
+||.||+|... .++..+|+|++..... ......+.+|+..+++++|+||+++++.+......+++
T Consensus 1 ~~g~v~~~~~~-~~~~~~~~k~~~~~~~--------------~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~ 65 (244)
T smart00220 1 SFGKVYLARDK-KTGKLVAIKVIKKEKI--------------KKKRERILREISILKKLKHPNIVRLYDVFEDEDKLYLV 65 (244)
T ss_pred CceEEEEEEEC-CCCcEEEEEEeccccc--------------ccHHHHHHHHHHHHHhCCCCcHHHHHhheeeCCEEEEE
Confidence 58999999764 4688999998843111 11156788899999999999999999999999999999
Q ss_pred EEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCCEEEeccCCccccC
Q 011360 284 YEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVLLNDDMEACISDLGLAMAIP 363 (487)
Q Consensus 284 ~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nill~~~~~~kl~DFg~s~~~~ 363 (487)
|||+++++|.+++.. ...+++..+..++.+++.++.+| |+.|++|+||+|+||+++.++.++|+|||.+....
T Consensus 66 ~e~~~~~~L~~~~~~----~~~~~~~~~~~~~~~l~~~l~~l---h~~~i~h~~i~~~ni~~~~~~~~~l~d~~~~~~~~ 138 (244)
T smart00220 66 MEYCDGGDLFDLLKK----RGRLSEDEARFYARQILSALEYL---HSNGIIHRDLKPENILLDEDGHVKLADFGLARQLD 138 (244)
T ss_pred EeCCCCCCHHHHHHh----ccCCCHHHHHHHHHHHHHHHHHH---HHcCeecCCcCHHHeEECCCCcEEEccccceeeec
Confidence 999999999999865 22388899999999999999999 66789999999999999999999999999998765
Q ss_pred CCCceeeEeeecccccccCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCccccCCCCccccHHHHHHHHhcCCCCCccC
Q 011360 364 DGYTRVLISYVLGTMAYIAPEYFQQPELSEKCDIFSFGMLLISLVRGVPSFVFHQNGEEICSPEWLRKVMNSKNPSRAID 443 (487)
Q Consensus 364 ~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DvwslG~~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 443 (487)
... ......++..|++||.+.+..++.++||||||+++|++++|..||..... ..................
T Consensus 139 ~~~---~~~~~~~~~~~~~pE~~~~~~~~~~~Di~slG~~l~~l~~~~~p~~~~~~------~~~~~~~~~~~~~~~~~~ 209 (244)
T smart00220 139 PGG---LLTTFVGTPEYMAPEVLLGKGYGKAVDVWSLGVILYELLTGKPPFPGDDQ------LLELFKKIGKPKPPFPPP 209 (244)
T ss_pred ccc---ccccccCCcCCCCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCc------HHHHHHHHhccCCCCccc
Confidence 542 12345578899999999888889999999999999999999999944211 112222222221111000
Q ss_pred CCCCCCCcHHHHHHHHHHHhhccCCCCCCCCChHHHHH
Q 011360 444 PRLPGNGYEKKMLHVLKIAYICTLHDPEERPNSQYVRC 481 (487)
Q Consensus 444 ~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~~il~ 481 (487)
. .....++.+++.+||..+|++||++.++++
T Consensus 210 -~------~~~~~~~~~~i~~~l~~~p~~Rp~~~~~~~ 240 (244)
T smart00220 210 -E------WKISPEAKDLIRKLLVKDPEKRLTAEEALQ 240 (244)
T ss_pred -c------ccCCHHHHHHHHHHccCCchhccCHHHHhh
Confidence 0 002356889999999999999999999986
No 389
>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.98 E-value=2.1e-32 Score=250.61 Aligned_cols=257 Identities=22% Similarity=0.287 Sum_probs=199.0
Q ss_pred HhhhccccccccccccccceeEEEEEecCCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccC-CCC
Q 011360 187 FLKKEDCFASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQI-RHR 265 (487)
Q Consensus 187 ~~~~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~hp 265 (487)
+....++|.++..||+|++.+|-++++. .+.+.||+|+++. ......+...-...|-.+..+- +||
T Consensus 245 ~~l~l~df~ll~vigrgsyakvl~~~~~-~t~qiyamkvvkk------------el~nddedidwvqtek~vfe~asn~p 311 (593)
T KOG0695|consen 245 QGLGLQDFDLLRVIGRGSYAKVLLVRLK-KTDQIYAMKVVKK------------ELVNDDEDIDWVQTEKHVFEQASNNP 311 (593)
T ss_pred cccccccceeeeeecCcchhhhhheehc-ccceeeehhhHHH------------HhcCCcccchhHHhhHHHHHhccCCC
Confidence 3344567999999999999999999864 5788999997622 1122233344445555555555 899
Q ss_pred CccccceEEecCCeeEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEe
Q 011360 266 NILPLLAHMVRPDCHLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVLL 345 (487)
Q Consensus 266 nIv~l~~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nill 345 (487)
.+|-+..+|.++..+++|.||++||+|--.++. ++.++++.++.+...|+-||.|| |++||++||||.+|+|+
T Consensus 312 flvglhscfqtesrlffvieyv~ggdlmfhmqr----qrklpeeharfys~ei~lal~fl---h~rgiiyrdlkldnvll 384 (593)
T KOG0695|consen 312 FLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQR----QRKLPEEHARFYSAEICLALNFL---HERGIIYRDLKLDNVLL 384 (593)
T ss_pred eEEehhhhhcccceEEEEEEEecCcceeeehhh----hhcCcHHHhhhhhHHHHHHHHHH---hhcCeeeeeccccceEE
Confidence 999999999999999999999999999888765 67799999999999999999999 89999999999999999
Q ss_pred CCCCCEEEeccCCccccCCCCceeeEeeecccccccCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCcccc-CCCCccc
Q 011360 346 NDDMEACISDLGLAMAIPDGYTRVLISYVLGTMAYIAPEYFQQPELSEKCDIFSFGMLLISLVRGVPSFVFH-QNGEEIC 424 (487)
Q Consensus 346 ~~~~~~kl~DFg~s~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DvwslG~~l~elltg~~pf~~~-~~~~~~~ 424 (487)
+..|++||+|+|+++.--.... ..++++|||.|.|||++.+..|+..+|+|+||++++||+.|+.||..- ....+.+
T Consensus 385 daeghikltdygmcke~l~~gd--~tstfcgtpnyiapeilrgeeygfsvdwwalgvlmfemmagrspfdivgm~n~d~n 462 (593)
T KOG0695|consen 385 DAEGHIKLTDYGMCKEGLGPGD--TTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIVGMDNPDMN 462 (593)
T ss_pred ccCCceeecccchhhcCCCCCc--ccccccCCCcccchhhhcccccCceehHHHHHHHHHHHHcCCCCcceecCCCcccc
Confidence 9999999999999986433322 236889999999999999999999999999999999999999999532 2223333
Q ss_pred cHHHHHHHHhcCCCCCccCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCC
Q 011360 425 SPEWLRKVMNSKNPSRAIDPRLPGNGYEKKMLHVLKIAYICTLHDPEERPN 475 (487)
Q Consensus 425 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs 475 (487)
...++-+++-.... ++|.. .+.....+++.-|.+||.+|..
T Consensus 463 tedylfqvilekqi------riprs----lsvkas~vlkgflnkdp~erlg 503 (593)
T KOG0695|consen 463 TEDYLFQVILEKQI------RIPRS----LSVKASHVLKGFLNKDPKERLG 503 (593)
T ss_pred hhHHHHHHHhhhcc------cccce----eehhhHHHHHHhhcCCcHHhcC
Confidence 33444444332221 12211 1233556777889999999853
No 390
>PLN03225 Serine/threonine-protein kinase SNT7; Provisional
Probab=99.98 E-value=7.5e-32 Score=281.44 Aligned_cols=262 Identities=21% Similarity=0.262 Sum_probs=164.6
Q ss_pred hccccccccccccccceeEEEEEecCCC----CceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCCC
Q 011360 190 KEDCFASLEKIGSGGCGEVYKAELPGSN----GKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQIRHR 265 (487)
Q Consensus 190 ~~~~~~~~~~lg~G~~g~v~~~~~~~~~----~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp 265 (487)
..++|.+.+.||+|+||.||+|++. .+ +..||+|++..... .+....+ .+....+.
T Consensus 130 ~~~~y~l~~~LG~G~FG~VYka~~~-~~~~~~~~~vAvK~~~~~~~-----------------~e~~~~e--~l~~~~~~ 189 (566)
T PLN03225 130 KKDDFVLGKKLGEGAFGVVYKASLV-NKQSKKEGKYVLKKATEYGA-----------------VEIWMNE--RVRRACPN 189 (566)
T ss_pred ccCCeEEeEEEeeCCCeEEEEEEEc-CCccccCcEEEEEEecccch-----------------hHHHHHH--HHHhhchh
Confidence 3467999999999999999999764 45 78999998742110 0000001 01111122
Q ss_pred CccccceE------EecCCeeEEEEEecCCCCHHHHHhhhhc----------------CCCCCChHHHHHHHHHHHHHHH
Q 011360 266 NILPLLAH------MVRPDCHLLVYEFMKNGSLQDILDDVSR----------------GRRELDWPSRHRIALGVASGLE 323 (487)
Q Consensus 266 nIv~l~~~------~~~~~~~~lv~E~~~~gsL~~~l~~~~~----------------~~~~l~~~~~~~i~~qi~~~L~ 323 (487)
++..+... .......++||||+.+++|.+++..... .+.......+..++.|++.||.
T Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~ 269 (566)
T PLN03225 190 SCADFVYGFLEPVSSKKEDEYWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALD 269 (566)
T ss_pred hHHHHHHhhhcccccccCCceEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHH
Confidence 22222211 2355678999999999999999864210 0011123345679999999999
Q ss_pred HHHhcCCCCeeecCCCCCCEEeCC-CCCEEEeccCCccccCCCCceeeEeeecccccccCCcccCCC-------------
Q 011360 324 YLHMYHSASIIHGDIKPRNVLLND-DMEACISDLGLAMAIPDGYTRVLISYVLGTMAYIAPEYFQQP------------- 389 (487)
Q Consensus 324 ~Lh~~h~~givH~Dlkp~Nill~~-~~~~kl~DFg~s~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~------------- 389 (487)
|| |++||+||||||+|||++. ++.+||+|||+++.+...... ......+++.|+|||.+...
T Consensus 270 yL---H~~gIiHRDLKP~NILl~~~~~~~KL~DFGlA~~l~~~~~~-~~~~~~~t~~Y~APE~~~~~~~~~~~~~~~~~~ 345 (566)
T PLN03225 270 GL---HSTGIVHRDVKPQNIIFSEGSGSFKIIDLGAAADLRVGINY-IPKEFLLDPRYAAPEQYIMSTQTPSAPSAPVAT 345 (566)
T ss_pred HH---HHCCEEeCcCCHHHEEEeCCCCcEEEEeCCCcccccccccc-CCcccccCCCccChHHhhccCCCCCCccccccc
Confidence 99 7788999999999999985 578999999999865433222 12346789999999966422
Q ss_pred ---------CCCchhHHHHHHHHHHHHHhCCCCccccC-------CCCccccHHHHHHHHhcCCCCCccCCCCCC--CCc
Q 011360 390 ---------ELSEKCDIFSFGMLLISLVRGVPSFVFHQ-------NGEEICSPEWLRKVMNSKNPSRAIDPRLPG--NGY 451 (487)
Q Consensus 390 ---------~~~~~~DvwslG~~l~elltg~~pf~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~ 451 (487)
.++.++|||||||++|||+++..|+.... .........|.... ... ..+.+.. ...
T Consensus 346 ~~sp~l~~~~~~~k~DVwSlGviL~el~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~-~~~-----~~~~~~~~~~~~ 419 (566)
T PLN03225 346 ALSPVLWQLNLPDRFDIYSAGLIFLQMAFPNLRSDSNLIQFNRQLKRNDYDLVAWRKLV-EPR-----ASPDLRRGFEVL 419 (566)
T ss_pred cccchhccccCCCCcccHHHHHHHHHHHhCcCCCchHHHHHHHHHHhcCCcHHHHHHhh-ccc-----cchhhhhhhhhc
Confidence 23456799999999999999765542110 00000011111110 000 0000000 000
Q ss_pred HHHHHHHHHHHhhccCCCCCCCCChHHHHH
Q 011360 452 EKKMLHVLKIAYICTLHDPEERPNSQYVRC 481 (487)
Q Consensus 452 ~~~~~~l~~li~~cl~~~P~~RPs~~~il~ 481 (487)
........+++.+||+.||++|||+.++++
T Consensus 420 d~~~~~~~dLi~~mL~~dP~kR~ta~e~L~ 449 (566)
T PLN03225 420 DLDGGAGWELLKSMMRFKGRQRISAKAALA 449 (566)
T ss_pred cccchHHHHHHHHHccCCcccCCCHHHHhC
Confidence 011223568999999999999999999985
No 391
>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]
Probab=99.97 E-value=3.5e-32 Score=275.67 Aligned_cols=247 Identities=24% Similarity=0.362 Sum_probs=186.1
Q ss_pred ccccccccccccee-EEEEEecCCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccC-CCCCccccc
Q 011360 194 FASLEKIGSGGCGE-VYKAELPGSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQI-RHRNILPLL 271 (487)
Q Consensus 194 ~~~~~~lg~G~~g~-v~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpnIv~l~ 271 (487)
|.-.+++|.|+.|+ ||+|.+ .|+.||||++. .+....+.+|+..++.- .|||||++|
T Consensus 511 ~~~~eilG~Gs~Gt~Vf~G~y---e~R~VAVKrll------------------~e~~~~A~rEi~lL~eSD~H~NviRyy 569 (903)
T KOG1027|consen 511 FSPKEILGYGSNGTVVFRGVY---EGREVAVKRLL------------------EEFFDFAQREIQLLQESDEHPNVIRYY 569 (903)
T ss_pred eccHHHcccCCCCcEEEEEee---CCceehHHHHh------------------hHhHHHHHHHHHHHHhccCCCceEEEE
Confidence 55567899999876 799987 67899999762 23345667899988877 899999999
Q ss_pred eEEecCCeeEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCC---C
Q 011360 272 AHMVRPDCHLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVLLND---D 348 (487)
Q Consensus 272 ~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nill~~---~ 348 (487)
+.-.+.+..||..|.| ..+|.++++..........-...+....|++.||++| |+.+||||||||.||||+. +
T Consensus 570 c~E~d~qF~YIalELC-~~sL~dlie~~~~d~~~~~~i~~~~~l~q~~~GlaHL---Hsl~iVHRDLkPQNILI~~~~~~ 645 (903)
T KOG1027|consen 570 CSEQDRQFLYIALELC-ACSLQDLIESSGLDVEMQSDIDPISVLSQIASGLAHL---HSLKIVHRDLKPQNILISVPSAD 645 (903)
T ss_pred eeccCCceEEEEehHh-hhhHHHHHhccccchhhcccccHHHHHHHHHHHHHHH---HhcccccccCCCceEEEEccCCC
Confidence 9999999999999999 5699999975211011111134577899999999999 6677999999999999975 3
Q ss_pred --CCEEEeccCCccccCCCCceee-EeeecccccccCCcccCCCCCCchhHHHHHHHHHHHHHhC-CCCccccCCCCccc
Q 011360 349 --MEACISDLGLAMAIPDGYTRVL-ISYVLGTMAYIAPEYFQQPELSEKCDIFSFGMLLISLVRG-VPSFVFHQNGEEIC 424 (487)
Q Consensus 349 --~~~kl~DFg~s~~~~~~~~~~~-~~~~~gt~~y~aPE~l~~~~~~~~~DvwslG~~l~elltg-~~pf~~~~~~~~~~ 424 (487)
..++|+|||+++.+..+..... .+...||-+|+|||++....-+.++||||+||++|+.++| ..||...-.
T Consensus 646 ~~~ra~iSDfglsKkl~~~~sS~~r~s~~sGt~GW~APE~L~~~~~~~avDiFslGCvfyYvltgG~HpFGd~~~----- 720 (903)
T KOG1027|consen 646 GTLRAKISDFGLSKKLAGGKSSFSRLSGGSGTSGWQAPEQLREDRKTQAVDIFSLGCVFYYVLTGGSHPFGDSLE----- 720 (903)
T ss_pred cceeEEecccccccccCCCcchhhcccCCCCcccccCHHHHhccccCcccchhhcCceEEEEecCCccCCCchHH-----
Confidence 4589999999998876544322 2456799999999999988888899999999999999997 999932211
Q ss_pred cHHHHHHHHhcCCCCCccCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCChHHHHH
Q 011360 425 SPEWLRKVMNSKNPSRAIDPRLPGNGYEKKMLHVLKIAYICTLHDPEERPNSQYVRC 481 (487)
Q Consensus 425 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~~il~ 481 (487)
....+..+......+.+. ... +..+||.+|++++|..||++.+|+.
T Consensus 721 ---R~~NIl~~~~~L~~L~~~------~d~--eA~dLI~~ml~~dP~~RPsa~~VL~ 766 (903)
T KOG1027|consen 721 ---RQANILTGNYTLVHLEPL------PDC--EAKDLISRMLNPDPQLRPSATDVLN 766 (903)
T ss_pred ---hhhhhhcCccceeeeccC------chH--HHHHHHHHhcCCCcccCCCHHHHhC
Confidence 111122222221111111 111 5789999999999999999999873
No 392
>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=1.1e-30 Score=250.28 Aligned_cols=133 Identities=29% Similarity=0.425 Sum_probs=113.7
Q ss_pred cccccccccccccceeEEEEEecCCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCC-----C--
Q 011360 192 DCFASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQIR-----H-- 264 (487)
Q Consensus 192 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-----h-- 264 (487)
.+|.+.++||.|.|++||++ |+..+.+.||+|+.+ ......+..+.|+.+|.+++ |
T Consensus 78 gRY~v~rKLGWGHFSTVWLa-wDtq~~r~VAlKVvK----------------SAqhYtEaAlDEIklL~~v~~~Dp~~~~ 140 (590)
T KOG1290|consen 78 GRYHVQRKLGWGHFSTVWLA-WDTQNKRYVALKVVK----------------SAQHYTEAALDEIKLLQQVREGDPNDPG 140 (590)
T ss_pred ceEEEEEeccccccceeEEE-eeccCCeEEEEEEEe----------------hhhHHHHHHHHHHHHHHHHHhcCCCCCC
Confidence 67899999999999999999 688899999999983 23345567788999988872 3
Q ss_pred -CCccccceEEec----CCeeEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCC
Q 011360 265 -RNILPLLAHMVR----PDCHLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIK 339 (487)
Q Consensus 265 -pnIv~l~~~~~~----~~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlk 339 (487)
.+||++++.|.. +.++|||+|++ |-+|..+|.. .+.+.++...++.|++|++.||.||| ...||||-|||
T Consensus 141 ~~~VV~LlD~FkhsGpNG~HVCMVfEvL-GdnLLklI~~--s~YrGlpl~~VK~I~~qvL~GLdYLH--~ecgIIHTDlK 215 (590)
T KOG1290|consen 141 KKCVVQLLDHFKHSGPNGQHVCMVFEVL-GDNLLKLIKY--SNYRGLPLSCVKEICRQVLTGLDYLH--RECGIIHTDLK 215 (590)
T ss_pred CceeeeeeccceecCCCCcEEEEEehhh-hhHHHHHHHH--hCCCCCcHHHHHHHHHHHHHHHHHHH--HhcCccccCCC
Confidence 369999999875 46789999999 8899999986 45677999999999999999999998 56799999999
Q ss_pred CCCEEeC
Q 011360 340 PRNVLLN 346 (487)
Q Consensus 340 p~Nill~ 346 (487)
|+|||+.
T Consensus 216 PENvLl~ 222 (590)
T KOG1290|consen 216 PENVLLC 222 (590)
T ss_pred cceeeee
Confidence 9999993
No 393
>PLN03224 probable serine/threonine protein kinase; Provisional
Probab=99.97 E-value=1.5e-30 Score=265.28 Aligned_cols=276 Identities=19% Similarity=0.234 Sum_probs=181.4
Q ss_pred ccccccccccccccceeEEEEEec---------------CCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHH
Q 011360 191 EDCFASLEKIGSGGCGEVYKAELP---------------GSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSE 255 (487)
Q Consensus 191 ~~~~~~~~~lg~G~~g~v~~~~~~---------------~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E 255 (487)
.++|.+.++||+|+||.||+|... ...++.||||++.........++.++.... ....+....|
T Consensus 144 ~d~F~i~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~~~~~~fl~e~~~~-~~~~e~~~vE 222 (507)
T PLN03224 144 SDDFQLRDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQGVRQDFLKTGTLA-KGSAETGMVE 222 (507)
T ss_pred ccCceEeeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccchhhHHHHHhhhhhh-hcccchhHHH
Confidence 457999999999999999999641 124567999998543322222222111111 1122334557
Q ss_pred HHHhccCCCCCc-----cccceEEec--------CCeeEEEEEecCCCCHHHHHhhhhc--------------------C
Q 011360 256 IITASQIRHRNI-----LPLLAHMVR--------PDCHLLVYEFMKNGSLQDILDDVSR--------------------G 302 (487)
Q Consensus 256 ~~~l~~l~hpnI-----v~l~~~~~~--------~~~~~lv~E~~~~gsL~~~l~~~~~--------------------~ 302 (487)
+.++.+++|.++ +++++++.. .+..++||||+++++|.+++..... .
T Consensus 223 ~~~l~~l~~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~~~ 302 (507)
T PLN03224 223 AYMCAKIKRNPIAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPDNMP 302 (507)
T ss_pred HHHHHHhhcccchhhhhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhhhcc
Confidence 777777766554 677777653 3567999999999999999864210 1
Q ss_pred CCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCCEEEeccCCccccCCCCceeeEeeecccccccC
Q 011360 303 RRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVLLNDDMEACISDLGLAMAIPDGYTRVLISYVLGTMAYIA 382 (487)
Q Consensus 303 ~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nill~~~~~~kl~DFg~s~~~~~~~~~~~~~~~~gt~~y~a 382 (487)
...+++..+..++.|++.+|.|| |+.+|+||||||+||+++.++.+||+|||++.......... .....+|+.|+|
T Consensus 303 ~~~~~~~~~~~i~~ql~~aL~~l---H~~~ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~~~~-~~~g~~tp~Y~a 378 (507)
T PLN03224 303 QDKRDINVIKGVMRQVLTGLRKL---HRIGIVHRDIKPENLLVTVDGQVKIIDFGAAVDMCTGINFN-PLYGMLDPRYSP 378 (507)
T ss_pred cccCCHHHHHHHHHHHHHHHHHH---HHCCeecCCCchHhEEECCCCcEEEEeCcCccccccCCccC-ccccCCCcceeC
Confidence 12346778889999999999999 67789999999999999999999999999997654332111 112235789999
Q ss_pred CcccCCCC--------------------C--CchhHHHHHHHHHHHHHhCCC-CccccCCCC------ccccHHHHHHHH
Q 011360 383 PEYFQQPE--------------------L--SEKCDIFSFGMLLISLVRGVP-SFVFHQNGE------EICSPEWLRKVM 433 (487)
Q Consensus 383 PE~l~~~~--------------------~--~~~~DvwslG~~l~elltg~~-pf~~~~~~~------~~~~~~~~~~~~ 433 (487)
||.+.... | ..+.||||+||++|+|++|.. ||....... ......|.. .
T Consensus 379 PE~l~~~~~~~~~~~~~~~~~l~~~~~~yg~~~~~DvwSlGvil~em~~~~l~p~~~~~~f~~~~~~~~~~~~~~r~--~ 456 (507)
T PLN03224 379 PEELVMPQSCPRAPAPAMAALLSPFAWLYGRPDLFDSYTAGVLLMQMCVPELRPVANIRLFNTELRQYDNDLNRWRM--Y 456 (507)
T ss_pred hhhhcCCCCCCccchhhhhhhhhhhHHhcCCCCccchhhHHHHHHHHHhCCCCCccchhhhhhHHhhccchHHHHHh--h
Confidence 99876432 1 124799999999999999964 763221100 001111111 1
Q ss_pred hcCCCCCccCCCCCCCCcHHHHHHHHHHHhhccCCCC---CCCCChHHHHH
Q 011360 434 NSKNPSRAIDPRLPGNGYEKKMLHVLKIAYICTLHDP---EERPNSQYVRC 481 (487)
Q Consensus 434 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P---~~RPs~~~il~ 481 (487)
..... + ++ ..........+++.+||..+| .+|+|++++++
T Consensus 457 ~~~~~----~--~~--~~d~~s~~~~dLi~~LL~~~~~~~~~RlSa~eaL~ 499 (507)
T PLN03224 457 KGQKY----D--FS--LLDRNKEAGWDLACKLITKRDQANRGRLSVGQALS 499 (507)
T ss_pred cccCC----C--cc--cccccChHHHHHHHHHhccCCCCcccCCCHHHHhC
Confidence 11111 1 11 122234568899999999766 68999999875
No 394
>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]
Probab=99.97 E-value=7.1e-32 Score=259.79 Aligned_cols=260 Identities=22% Similarity=0.263 Sum_probs=201.1
Q ss_pred ccccccccccccccceeEEEEEecCCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCC------
Q 011360 191 EDCFASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQIRH------ 264 (487)
Q Consensus 191 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h------ 264 (487)
.+.|.+....|.|-|++|.+|.. ...|..||||++.. .+...+.=+.|+++|.+|..
T Consensus 431 D~RY~V~~~~GkGvFs~Vvra~D-~~r~~~vAiKIIRn----------------NE~M~KtGl~EleiLkKL~~AD~Edk 493 (752)
T KOG0670|consen 431 DSRYEVQGYTGKGVFSTVVRARD-QARGQEVAIKIIRN----------------NEVMHKTGLKELEILKKLNDADPEDK 493 (752)
T ss_pred cceeEEEeccccceeeeeeeccc-cCCCCeeEEEEeec----------------chHHhhhhhHHHHHHHHhhccCchhh
Confidence 35688889999999999999974 45677999999843 22233445678999999843
Q ss_pred CCccccceEEecCCeeEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEE
Q 011360 265 RNILPLLAHMVRPDCHLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVL 344 (487)
Q Consensus 265 pnIv~l~~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nil 344 (487)
-|.++++..|...+++|||+|-+ ..+|.+.|..+.. +-.+.+..+..++.|+.-||..| ...||+|.||||+|||
T Consensus 494 ~Hclrl~r~F~hknHLClVFE~L-slNLRevLKKyG~-nvGL~ikaVRsYaqQLflALklL---K~c~vlHaDIKPDNiL 568 (752)
T KOG0670|consen 494 FHCLRLFRHFKHKNHLCLVFEPL-SLNLREVLKKYGR-NVGLHIKAVRSYAQQLFLALKLL---KKCGVLHADIKPDNIL 568 (752)
T ss_pred hHHHHHHHHhhhcceeEEEehhh-hchHHHHHHHhCc-ccceeehHHHHHHHHHHHHHHHH---HhcCeeecccCccceE
Confidence 48999999999999999999988 6699999998744 45678889999999999999999 6778999999999999
Q ss_pred eCCC-CCEEEeccCCccccCCCCceeeEeeecccccccCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCccccCCCCcc
Q 011360 345 LNDD-MEACISDLGLAMAIPDGYTRVLISYVLGTMAYIAPEYFQQPELSEKCDIFSFGMLLISLVRGVPSFVFHQNGEEI 423 (487)
Q Consensus 345 l~~~-~~~kl~DFg~s~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DvwslG~~l~elltg~~pf~~~~~~~~~ 423 (487)
++++ ..+||||||.|........ +.+..+..|.|||++.+-+|+...|+||.||+||||.||+..|.+.++....
T Consensus 569 VNE~k~iLKLCDfGSA~~~~enei----tPYLVSRFYRaPEIiLG~~yd~~iD~WSvgctLYElYtGkIlFpG~TNN~ML 644 (752)
T KOG0670|consen 569 VNESKNILKLCDFGSASFASENEI----TPYLVSRFYRAPEIILGLPYDYPIDTWSVGCTLYELYTGKILFPGRTNNQML 644 (752)
T ss_pred eccCcceeeeccCccccccccccc----cHHHHHHhccCcceeecCcccCCccceeeceeeEEeeccceecCCCCcHHHH
Confidence 9976 4579999999977654432 3345677899999999999999999999999999999999999776653321
Q ss_pred ccHHHHHHHHhcCCCCCcc----------C--------------------------------------CCCCCCCcHHHH
Q 011360 424 CSPEWLRKVMNSKNPSRAI----------D--------------------------------------PRLPGNGYEKKM 455 (487)
Q Consensus 424 ~~~~~~~~~~~~~~~~~~~----------~--------------------------------------~~~~~~~~~~~~ 455 (487)
-.. .-+.+..|..++ | ++++ .......
T Consensus 645 rl~----me~KGk~p~KmlRKgqF~dqHFD~d~nf~~~e~D~vT~r~~~~vm~~vkPtkdl~s~l~~~q~~~-deq~~~~ 719 (752)
T KOG0670|consen 645 RLF----MELKGKFPNKMLRKGQFKDQHFDQDLNFLYIEVDKVTEREKRTVMVNVKPTKDLGSELIAVQRLP-DEQPKIV 719 (752)
T ss_pred HHH----HHhcCCCcHHHhhhcchhhhhcccccceEEEeccccccceeEEEecccCcchhHHHHHhccCCCC-chhHHHH
Confidence 000 000011111111 0 1111 1233556
Q ss_pred HHHHHHHhhccCCCCCCCCChHHHHH
Q 011360 456 LHVLKIAYICTLHDPEERPNSQYVRC 481 (487)
Q Consensus 456 ~~l~~li~~cl~~~P~~RPs~~~il~ 481 (487)
.+|.+|+..||..||++|.|..+.++
T Consensus 720 ~~~rdLLdkml~LdP~KRit~nqAL~ 745 (752)
T KOG0670|consen 720 QQLRDLLDKMLILDPEKRITVNQALK 745 (752)
T ss_pred HHHHHHHHHHhccChhhcCCHHHHhc
Confidence 78999999999999999999999875
No 395
>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]
Probab=99.97 E-value=1.4e-31 Score=260.82 Aligned_cols=203 Identities=29% Similarity=0.419 Sum_probs=170.0
Q ss_pred ccccccccccccceeEEEEEecCCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCC---CCCccc
Q 011360 193 CFASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQIR---HRNILP 269 (487)
Q Consensus 193 ~~~~~~~lg~G~~g~v~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~---hpnIv~ 269 (487)
.|..++.+|.|+||+|++|.++ .+...|+||.+...+ ++ .+.-.+...+-.+-.|+++|+.++ |+||++
T Consensus 562 ~yttlq~lG~GAyGkV~lai~K-~n~~eVViK~I~KeR------IL-~DtWvrDrkLGtVp~EIqIla~l~~~sH~NIlK 633 (772)
T KOG1152|consen 562 DYTTLQPLGEGAYGKVNLAIHK-ENNYEVVIKMIFKER------IL-VDTWVRDRKLGTVPSEIQILATLNKHSHENILK 633 (772)
T ss_pred cceeeeeccccccceEEEeeec-ccceEEEeeehhhhh------hh-hhhhhcccccCccchhHHHHHHhhhcCccchhh
Confidence 4899999999999999999875 457889999763211 11 111122222334567999999996 999999
Q ss_pred cceEEecCCeeEEEEEec-CCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCC
Q 011360 270 LLAHMVRPDCHLLVYEFM-KNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVLLNDD 348 (487)
Q Consensus 270 l~~~~~~~~~~~lv~E~~-~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nill~~~ 348 (487)
++++|.+++.+||+||-. +|.+|.++++. ...+++..+..|++|++.|+++| |+.||||||||-+|+.++.+
T Consensus 634 lLdfFEddd~yyl~te~hg~gIDLFd~IE~----kp~m~E~eAk~IFkQV~agi~hl---h~~~ivhrdikdenvivd~~ 706 (772)
T KOG1152|consen 634 LLDFFEDDDYYYLETEVHGEGIDLFDFIEF----KPRMDEPEAKLIFKQVVAGIKHL---HDQGIVHRDIKDENVIVDSN 706 (772)
T ss_pred hhheeecCCeeEEEecCCCCCcchhhhhhc----cCccchHHHHHHHHHHHhccccc---cccCceecccccccEEEecC
Confidence 999999999999999976 56789999975 67789999999999999999999 99999999999999999999
Q ss_pred CCEEEeccCCccccCCCCceeeEeeecccccccCCcccCCCCC-CchhHHHHHHHHHHHHHhCCCCc
Q 011360 349 MEACISDLGLAMAIPDGYTRVLISYVLGTMAYIAPEYFQQPEL-SEKCDIFSFGMLLISLVRGVPSF 414 (487)
Q Consensus 349 ~~~kl~DFg~s~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~-~~~~DvwslG~~l~elltg~~pf 414 (487)
|-+||+|||.+.....+.- ..++||..|.|||++.+..| +...|||++|++||.++....||
T Consensus 707 g~~klidfgsaa~~ksgpf----d~f~gtv~~aapevl~g~~y~gk~qdiwalgillytivykenpy 769 (772)
T KOG1152|consen 707 GFVKLIDFGSAAYTKSGPF----DVFVGTVDYAAPEVLGGEKYLGKPQDIWALGILLYTIVYKENPY 769 (772)
T ss_pred CeEEEeeccchhhhcCCCc----ceeeeeccccchhhhCCCccCCCcchhhhhhheeeEEEeccCCC
Confidence 9999999999977655433 45779999999999999887 45689999999999999998888
No 396
>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=3.1e-32 Score=243.20 Aligned_cols=264 Identities=24% Similarity=0.303 Sum_probs=192.8
Q ss_pred cccccccccccceeEEEEEecCCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCCCCccccceE
Q 011360 194 FASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQIRHRNILPLLAH 273 (487)
Q Consensus 194 ~~~~~~lg~G~~g~v~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~ 273 (487)
.+.-+.||.|+||.||.++ +..+|+.||+|++.. -..+-...+.+.+|+.++..++|.|++..++.
T Consensus 55 i~PDRPIGYGAFGVVWsVT-DPRdgrrvalkK~pn-------------vfq~L~s~krvFre~kmLcfFkHdNVLSaLDI 120 (449)
T KOG0664|consen 55 IQPDRPIGYGAFGVVWSVT-DPRSGKRVALKKMPN-------------VFQNLASCKRVFREIKMLSSFRHDNVLSLLDI 120 (449)
T ss_pred CCCCCcccccceeEEEecc-CCCCccchhHhhcch-------------HHHHHHHHHHHHHHHHHHHhhccccHHHHHHh
Confidence 4556789999999999997 456899999998843 12233355678899999999999999999998
Q ss_pred EecCC-----eeEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCC
Q 011360 274 MVRPD-----CHLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVLLNDD 348 (487)
Q Consensus 274 ~~~~~-----~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nill~~~ 348 (487)
..-.. .+|+++|.+. .+|..++- ....++...++-+..||++||+|| |+.||.||||||.|.|++.|
T Consensus 121 LQPph~dfFqEiYV~TELmQ-SDLHKIIV----SPQ~Ls~DHvKVFlYQILRGLKYL---HsA~ILHRDIKPGNLLVNSN 192 (449)
T KOG0664|consen 121 LQPANPSFFQELYVLTELMQ-SDLHKIIV----SPQALTPDHVKVFVYQILRGLKYL---HTANILHRDIKPGNLLVNSN 192 (449)
T ss_pred cCCCCchHHHHHHHHHHHHH-hhhhheec----cCCCCCcchhhhhHHHHHhhhHHH---hhcchhhccCCCccEEeccC
Confidence 76543 4578899884 47777663 367888899999999999999999 88999999999999999999
Q ss_pred CCEEEeccCCccccCCCCceeeEeeecccccccCCcccCCC-CCCchhHHHHHHHHHHHHHhCCCCccccCCCCccc---
Q 011360 349 MEACISDLGLAMAIPDGYTRVLISYVLGTMAYIAPEYFQQP-ELSEKCDIFSFGMLLISLVRGVPSFVFHQNGEEIC--- 424 (487)
Q Consensus 349 ~~~kl~DFg~s~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~-~~~~~~DvwslG~~l~elltg~~pf~~~~~~~~~~--- 424 (487)
..+||||||+++.........+ +..+.|..|.|||++.+. .|+.+.||||.||++.|++..+..|...++-....
T Consensus 193 CvLKICDFGLARvee~d~~~hM-TqEVVTQYYRAPEiLMGaRhYs~AvDiWSVGCIFaELLgRrILFQAq~PiqQL~lIt 271 (449)
T KOG0664|consen 193 CILKICDFGLARTWDQRDRLNM-THEVVTQYYRAPELLMGARRYTGAVDIWSVGCIFAELLQRKILFQAAGPIEQLQMII 271 (449)
T ss_pred ceEEecccccccccchhhhhhh-HHHHHHHHhccHHHhhcchhhcCccceehhhHHHHHHHhhhhhhhccChHHHHHHHH
Confidence 9999999999987655544333 344578999999999876 79999999999999999999999885544322110
Q ss_pred ------cHHHHHH--------HHhcCCCCCcc--CCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCChHHHHHH
Q 011360 425 ------SPEWLRK--------VMNSKNPSRAI--DPRLPGNGYEKKMLHVLKIAYICTLHDPEERPNSQYVRCR 482 (487)
Q Consensus 425 ------~~~~~~~--------~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~~il~~ 482 (487)
..+.++. +.+...-...+ -..+.+. ...-.+...++..++.++|+.|.+..+.+..
T Consensus 272 dLLGTPs~EaMr~ACEGAk~H~LR~~~k~Ps~~vLYtlsS~--~~~~heav~~~~~~l~~d~dkris~~~A~~~ 343 (449)
T KOG0664|consen 272 DLLGTPSQEAMKYACEGAKNHVLRAGLRAPDTQRLYKIASP--DDKNHEAVDLLQKLLHFDPDKRISVEEALQH 343 (449)
T ss_pred HHhCCCcHHHHHHHhhhhHHHhhccCCCCCCccceeeecCC--cccchHHHHHHHHHhCCCCcccccHhhhccc
Confidence 1111111 11111100000 0011110 1111234567778999999999998887654
No 397
>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]
Probab=99.97 E-value=1.8e-30 Score=226.40 Aligned_cols=258 Identities=21% Similarity=0.317 Sum_probs=194.2
Q ss_pred hccccccccccccccceeEEEEEecCCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCC-CCCcc
Q 011360 190 KEDCFASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQIR-HRNIL 268 (487)
Q Consensus 190 ~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-hpnIv 268 (487)
..++|++.+.+|+|-++.||.|. +..+++.++||++. +-..+.+.+|+.++..|. ||||+
T Consensus 36 ~~ddYeivrk~GRGKYSEVFeg~-~~~~~eK~ViKiLK------------------PVkkkKIkREikIL~nL~gg~NIi 96 (338)
T KOG0668|consen 36 NQDDYEIVRKVGRGKYSEVFEGI-NITNNEKCVIKILK------------------PVKKKKIKREIKILQNLRGGPNII 96 (338)
T ss_pred ccchHHHHHHHcCccHhhHhccc-ccCCCceEEEeeec------------------hHHHHHHHHHHHHHHhccCCCCee
Confidence 34569999999999999999996 45678899999872 334567889999999995 99999
Q ss_pred ccceEEecC--CeeEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeC
Q 011360 269 PLLAHMVRP--DCHLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVLLN 346 (487)
Q Consensus 269 ~l~~~~~~~--~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nill~ 346 (487)
+++++..++ ....+|+||+.+.+...+.. .++...+..++.+++.||.|+ |+.||+|||+||.|++++
T Consensus 97 ~L~DiV~Dp~SktpaLiFE~v~n~Dfk~ly~-------tl~d~dIryY~~elLkALdyC---HS~GImHRDVKPhNvmId 166 (338)
T KOG0668|consen 97 KLLDIVKDPESKTPSLIFEYVNNTDFKQLYP-------TLTDYDIRYYIYELLKALDYC---HSMGIMHRDVKPHNVMID 166 (338)
T ss_pred ehhhhhcCccccCchhHhhhhccccHHHHhh-------hhchhhHHHHHHHHHHHHhHH---HhcCcccccCCcceeeec
Confidence 999998875 45679999999888776653 366778899999999999999 899999999999999999
Q ss_pred CC-CCEEEeccCCccccCCCCceeeEeeecccccccCCcccCC-CCCCchhHHHHHHHHHHHHHhCCCCccccCCCCccc
Q 011360 347 DD-MEACISDLGLAMAIPDGYTRVLISYVLGTMAYIAPEYFQQ-PELSEKCDIFSFGMLLISLVRGVPSFVFHQNGEEIC 424 (487)
Q Consensus 347 ~~-~~~kl~DFg~s~~~~~~~~~~~~~~~~gt~~y~aPE~l~~-~~~~~~~DvwslG~~l~elltg~~pf~~~~~~~~~~ 424 (487)
.. -.++|+|+|++....++... ...+.+..|--||.+.. +.|+..-|+|||||++..|++.+.||..+....+..
T Consensus 167 h~~rkLrlIDWGLAEFYHp~~eY---nVRVASRyfKGPELLVdy~~YDYSLD~WS~GcmlA~miFrkepFFhG~dN~DQL 243 (338)
T KOG0668|consen 167 HELRKLRLIDWGLAEFYHPGKEY---NVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQL 243 (338)
T ss_pred hhhceeeeeecchHhhcCCCcee---eeeeehhhcCCchheeechhccccHHHHHHHHHHHHHHhccCcccCCCCCHHHH
Confidence 54 56899999999887665443 23346778889998864 478999999999999999999999986544333221
Q ss_pred c-------HHHHHHHHhcCCCCCccCCC----------------CCCCCcHHHHHHHHHHHhhccCCCCCCCCChHHHHH
Q 011360 425 S-------PEWLRKVMNSKNPSRAIDPR----------------LPGNGYEKKMLHVLKIAYICTLHDPEERPNSQYVRC 481 (487)
Q Consensus 425 ~-------~~~~~~~~~~~~~~~~~~~~----------------~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~~il~ 481 (487)
. .+.+...+..- .-.+|+. ++++...-...+..+++.+.|..|..+|||+++.+.
T Consensus 244 VkIakVLGt~el~~Yl~KY--~i~Ldp~~~~i~~~~~rk~w~~Fi~~~n~hl~~peaiDlldklLrYDHqeRlTakEam~ 321 (338)
T KOG0668|consen 244 VKIAKVLGTDELYAYLNKY--QIDLDPQFEDILGRHSRKPWSRFINSENQHLVSPEAIDLLDKLLRYDHQERLTAKEAMA 321 (338)
T ss_pred HHHHHHhChHHHHHHHHHH--ccCCChhHhhHhhccccccHHHhCCccccccCChHHHHHHHHHHhhccccccchHHHhc
Confidence 0 11111111110 0011211 111111122356889999999999999999999764
No 398
>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]
Probab=99.96 E-value=5.7e-30 Score=233.94 Aligned_cols=262 Identities=26% Similarity=0.348 Sum_probs=192.8
Q ss_pred ccccccccccccccceeEEEEEecCCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCCCCcccc
Q 011360 191 EDCFASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQIRHRNILPL 270 (487)
Q Consensus 191 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l 270 (487)
..+|.-+..+|.|.- .|..+ .+.-.+.+||+|++... .......++..+|..++..+.|+||+++
T Consensus 16 ~~Ry~nL~p~~~g~~-~v~~a-~D~v~~~~v~ikk~~~p-------------f~n~~~akra~rel~l~~~v~~~nii~l 80 (369)
T KOG0665|consen 16 PKRYVNLKPIGSGAQ-IVVAA-FDQVLGRPVAIKKLSRP-------------FQNQTHAKRAYRELKLMKCVNHKNIISL 80 (369)
T ss_pred eeeeeeecccCCCCc-eEEec-chhhccCceehhhhcCc-------------cccCccchhhhhhhhhhhhhcccceeee
Confidence 346777888898887 55555 46668899999987432 1112345667889999999999999999
Q ss_pred ceEEecCC------eeEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEE
Q 011360 271 LAHMVRPD------CHLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVL 344 (487)
Q Consensus 271 ~~~~~~~~------~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nil 344 (487)
+.++.-.. ..|+|||+| .++|...+. ..++-.++..+..|+++|++|| |+.||+||||||+||+
T Consensus 81 ~n~ftP~~~l~~~~e~y~v~e~m-~~nl~~vi~------~elDH~tis~i~yq~~~~ik~l---hs~~IihRdLkPsniv 150 (369)
T KOG0665|consen 81 LNVFTPQKTLEEFQEVYLVMELM-DANLCQVIL------MELDHETISYILYQMLCGIKHL---HSAGIIHRDLKPSNIV 150 (369)
T ss_pred eeccCccccHHHHHhHHHHHHhh-hhHHHHHHH------HhcchHHHHHHHHHHHHHHHHH---HhcceeecccCcccce
Confidence 99887543 469999999 668988875 3456678899999999999999 8999999999999999
Q ss_pred eCCCCCEEEeccCCccccCCCCceeeEeeecccccccCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCccccCCCC---
Q 011360 345 LNDDMEACISDLGLAMAIPDGYTRVLISYVLGTMAYIAPEYFQQPELSEKCDIFSFGMLLISLVRGVPSFVFHQNGE--- 421 (487)
Q Consensus 345 l~~~~~~kl~DFg~s~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DvwslG~~l~elltg~~pf~~~~~~~--- 421 (487)
+..+..+||.|||+++..... ...+.++.|..|.|||++.+..|...+||||+||++.||++|...|.+.+.-.
T Consensus 151 v~~~~~lKi~dfg~ar~e~~~---~~mtpyVvtRyyrapevil~~~~ke~vdiwSvGci~gEli~~~Vlf~g~d~idQ~~ 227 (369)
T KOG0665|consen 151 VNSDCTLKILDFGLARTEDTD---FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELILGTVLFPGKDHIDQWN 227 (369)
T ss_pred ecchhheeeccchhhcccCcc---cccCchhheeeccCchheeccCCcccchhhhhhhHHHHHhhceEEecCchHHHHHH
Confidence 999999999999999865443 23356778999999999998889999999999999999999999886442100
Q ss_pred ------ccccHHHH-------HHHHhcCCCC---CccCCCCCCC-------CcHHHHHHHHHHHhhccCCCCCCCCChHH
Q 011360 422 ------EICSPEWL-------RKVMNSKNPS---RAIDPRLPGN-------GYEKKMLHVLKIAYICTLHDPEERPNSQY 478 (487)
Q Consensus 422 ------~~~~~~~~-------~~~~~~~~~~---~~~~~~~~~~-------~~~~~~~~l~~li~~cl~~~P~~RPs~~~ 478 (487)
+...+.+. +.+.. ..+. ..+...+|.. ...-....+.+++.+||-.||++|.|+++
T Consensus 228 ki~~~lgtpd~~F~~qL~~~~r~yv~-~~~~y~~~~f~~~fpD~~f~~~~e~~~~~~~~ardll~~MLvi~pe~Risv~d 306 (369)
T KOG0665|consen 228 KIIEQLGTPDPSFMKQLQPTVRNYVE-NRPQYQAISFSELFPDSLFPVVLEGSKLDCSLARDLLSKMLVIDPEKRISVDD 306 (369)
T ss_pred HHHHHhcCCCHHHHHHhhHHHHHHhh-cChHhhccchhhhCCcccccccccCCccchHHHHHHHHHhhccChhhcccHHH
Confidence 00001111 11111 1110 1111111111 11123345789999999999999999999
Q ss_pred HHH
Q 011360 479 VRC 481 (487)
Q Consensus 479 il~ 481 (487)
++.
T Consensus 307 aL~ 309 (369)
T KOG0665|consen 307 ALR 309 (369)
T ss_pred Hhc
Confidence 875
No 399
>cd00180 PKc Catalytic domain of Protein Kinases. Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which
Probab=99.96 E-value=5.5e-28 Score=221.18 Aligned_cols=212 Identities=34% Similarity=0.537 Sum_probs=179.7
Q ss_pred cccccceeEEEEEecCCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCCCCccccceEEecCCe
Q 011360 200 IGSGGCGEVYKAELPGSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQIRHRNILPLLAHMVRPDC 279 (487)
Q Consensus 200 lg~G~~g~v~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~ 279 (487)
||.|++|.||++... .++..+++|++..... ......+.+|+..++.+.|++|+++++++.....
T Consensus 1 l~~g~~~~v~~~~~~-~~~~~~~~K~~~~~~~--------------~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~ 65 (215)
T cd00180 1 LGEGGFGTVYLARDK-KTGKKVAIKIIKKEDS--------------SSLLEELLREIEILKKLNHPNIVKLYGVFEDENH 65 (215)
T ss_pred CCcCCceEEEEEEec-CCCcEEEEEEeccccc--------------hhHHHHHHHHHHHHHhcCCCCeeeEeeeeecCCe
Confidence 689999999999764 3588999998843111 0034678899999999999999999999999999
Q ss_pred eEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCC-CCCEEEeccCC
Q 011360 280 HLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVLLND-DMEACISDLGL 358 (487)
Q Consensus 280 ~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nill~~-~~~~kl~DFg~ 358 (487)
.+++||++.+++|.+++... ...+++..+..++.+++.++.+| |+.|++|+||+|.||+++. ++.++|+|||.
T Consensus 66 ~~~~~e~~~~~~l~~~~~~~---~~~~~~~~~~~~~~~l~~~l~~l---h~~~~~H~dl~~~ni~~~~~~~~~~l~d~~~ 139 (215)
T cd00180 66 LYLVMEYCEGGSLKDLLKEN---EGKLSEDEILRILLQILEGLEYL---HSNGIIHRDLKPENILLDSDNGKVKLADFGL 139 (215)
T ss_pred EEEEEecCCCCcHHHHHHhc---cCCCCHHHHHHHHHHHHHHHHHH---HhCCeeccCCCHhhEEEeCCCCcEEEecCCc
Confidence 99999999999999998752 14688999999999999999999 6779999999999999999 89999999999
Q ss_pred ccccCCCCceeeEeeecccccccCCcccCCC-CCCchhHHHHHHHHHHHHHhCCCCccccCCCCccccHHHHHHHHhcCC
Q 011360 359 AMAIPDGYTRVLISYVLGTMAYIAPEYFQQP-ELSEKCDIFSFGMLLISLVRGVPSFVFHQNGEEICSPEWLRKVMNSKN 437 (487)
Q Consensus 359 s~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~-~~~~~~DvwslG~~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~ 437 (487)
+........ ......+...|++||.+... .++.++|+|++|++++++
T Consensus 140 ~~~~~~~~~--~~~~~~~~~~~~~pe~~~~~~~~~~~~D~~~lg~~~~~l------------------------------ 187 (215)
T cd00180 140 SKLLTSDKS--LLKTIVGTPAYMAPEVLLGKGYYSEKSDIWSLGVILYEL------------------------------ 187 (215)
T ss_pred eEEccCCcc--hhhcccCCCCccChhHhcccCCCCchhhhHHHHHHHHHH------------------------------
Confidence 976654321 11234578899999999887 888999999999999998
Q ss_pred CCCccCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCChHHHHHH
Q 011360 438 PSRAIDPRLPGNGYEKKMLHVLKIAYICTLHDPEERPNSQYVRCR 482 (487)
Q Consensus 438 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~~il~~ 482 (487)
..+.+++..|++.+|++||++.++++.
T Consensus 188 ------------------~~~~~~l~~~l~~~p~~R~~~~~l~~~ 214 (215)
T cd00180 188 ------------------PELKDLIRKMLQKDPEKRPSAKEILEH 214 (215)
T ss_pred ------------------HHHHHHHHHHhhCCcccCcCHHHHhhC
Confidence 237899999999999999999999864
No 400
>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]
Probab=99.96 E-value=4.2e-29 Score=223.12 Aligned_cols=252 Identities=19% Similarity=0.285 Sum_probs=185.7
Q ss_pred hhccccccccccccccceeEEEEEecCCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccC-CCCCc
Q 011360 189 KKEDCFASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQI-RHRNI 267 (487)
Q Consensus 189 ~~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpnI 267 (487)
...+.|.+.+.||+|.||++-++.++ .++..+++|-+.. .....+.|.+|...--.| .|.||
T Consensus 21 ~l~d~y~I~k~lgeG~FgkIlL~eHr-~s~t~ivlKavp~----------------p~tt~~dF~rEfhY~~~Ls~H~hI 83 (378)
T KOG1345|consen 21 DLEDVYTINKQLGEGRFGKILLAEHR-QSKTRIVLKAVPR----------------PQTTQADFVREFHYSFFLSPHQHI 83 (378)
T ss_pred chhhhhhHHHHhcccceeeEEeeecc-CCceEEEeeccCc----------------chhhHHHHHHHhccceeeccchhh
Confidence 34567999999999999999999875 5778899997732 233567788888776666 78999
Q ss_pred cccceE-EecCCeeEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeC
Q 011360 268 LPLLAH-MVRPDCHLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVLLN 346 (487)
Q Consensus 268 v~l~~~-~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nill~ 346 (487)
+.-|++ |...+.+++++||++.|+|.+-+.. ..+.+..-.+++.|+++|+.|+ |++++||||||.+||||-
T Consensus 84 i~tY~vaFqt~d~YvF~qE~aP~gdL~snv~~-----~GigE~~~K~v~~ql~SAi~fM---HsknlVHRdlK~eNiLif 155 (378)
T KOG1345|consen 84 IDTYEVAFQTSDAYVFVQEFAPRGDLRSNVEA-----AGIGEANTKKVFAQLLSAIEFM---HSKNLVHRDLKAENILIF 155 (378)
T ss_pred hHHHHHHhhcCceEEEeeccCccchhhhhcCc-----ccccHHHHHHHHHHHHHHHHHh---hccchhhcccccceEEEe
Confidence 999965 5566778899999999999887753 4577788889999999999999 889999999999999994
Q ss_pred --CCCCEEEeccCCccccCCCCceeeEeeecccccccCCcccCC---C--CCCchhHHHHHHHHHHHHHhCCCCccccCC
Q 011360 347 --DDMEACISDLGLAMAIPDGYTRVLISYVLGTMAYIAPEYFQQ---P--ELSEKCDIFSFGMLLISLVRGVPSFVFHQN 419 (487)
Q Consensus 347 --~~~~~kl~DFg~s~~~~~~~~~~~~~~~~gt~~y~aPE~l~~---~--~~~~~~DvwslG~~l~elltg~~pf~~~~~ 419 (487)
+...+||||||..+..+... ....-+..|.+||.... . ...+.+|+|.||+++|..+||.+||.....
T Consensus 156 ~~df~rvKlcDFG~t~k~g~tV-----~~~~~~~~y~~pe~~~~~~ne~~~~~ps~D~WqfGIi~f~cltG~~PWQka~~ 230 (378)
T KOG1345|consen 156 DADFYRVKLCDFGLTRKVGTTV-----KYLEYVNNYHAPELCDTVVNEKLVVNPSTDIWQFGIIFFYCLTGKFPWQKASI 230 (378)
T ss_pred cCCccEEEeeecccccccCcee-----hhhhhhcccCCcHHHhhccccceEecccccchheeeeeeeeecCCCcchhhhc
Confidence 34579999999987653322 22334667999996542 2 346789999999999999999999963322
Q ss_pred CCccccHHHHHHHHhcCCCCCccCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCChHHH
Q 011360 420 GEEICSPEWLRKVMNSKNPSRAIDPRLPGNGYEKKMLHVLKIAYICTLHDPEERPNSQYV 479 (487)
Q Consensus 420 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~~i 479 (487)
.+....+|. .+..+... .+| ..+...+..+.++.++-|.++|++|=-..+.
T Consensus 231 -~d~~Y~~~~--~w~~rk~~-----~~P-~~F~~fs~~a~r~Fkk~lt~~~~drcki~~~ 281 (378)
T KOG1345|consen 231 -MDKPYWEWE--QWLKRKNP-----ALP-KKFNPFSEKALRLFKKSLTPRFKDRCKIWTA 281 (378)
T ss_pred -cCchHHHHH--HHhcccCc-----cCc-hhhcccCHHHHHHHHHhcCCcccccchhHHH
Confidence 122222332 22222211 122 2233445667888889999999999444333
No 401
>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]
Probab=99.96 E-value=7.2e-30 Score=252.77 Aligned_cols=253 Identities=27% Similarity=0.400 Sum_probs=199.7
Q ss_pred ccccccccccccccceeEEEEEecCCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCCCCcccc
Q 011360 191 EDCFASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQIRHRNILPL 270 (487)
Q Consensus 191 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l 270 (487)
.++|..+..+|.|++|.||+++ +..+++..|+|.+.... .....-+.+|+.+++..+|||||.+
T Consensus 14 ~ddyellqrvgsgTygdvyKaR-d~~s~elaavkvVkLep---------------~dd~~~iqqei~~~~dc~h~nivay 77 (829)
T KOG0576|consen 14 QDDYELLQRVGSGTYGDVYKAR-DKRSGELAAVKVVKLEP---------------GDDFSGIQQEIGMLRDCRHPNIVAY 77 (829)
T ss_pred ccchhheeeecCCcccchhhhc-ccccCchhhheeeeccC---------------CccccccccceeeeecCCCcChHHH
Confidence 4579999999999999999997 56789999999985432 2234456778999999999999999
Q ss_pred ceEEecCCeeEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCC
Q 011360 271 LAHMVRPDCHLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVLLNDDME 350 (487)
Q Consensus 271 ~~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nill~~~~~ 350 (487)
++.+...+.++++||||.||+|.+.-. .-.++++.++...++...+||+|| |+.|-+|||||-.||++++.|.
T Consensus 78 ~gsylr~dklwicMEycgggslQdiy~----~TgplselqiayvcRetl~gl~yl---hs~gk~hRdiKGanilltd~gD 150 (829)
T KOG0576|consen 78 FGSYLRRDKLWICMEYCGGGSLQDIYH----VTGPLSELQIAYVCRETLQGLKYL---HSQGKIHRDIKGANILLTDEGD 150 (829)
T ss_pred HhhhhhhcCcEEEEEecCCCcccceee----ecccchhHHHHHHHhhhhccchhh---hcCCcccccccccceeecccCc
Confidence 999999999999999999999998764 357899999999999999999999 8899999999999999999999
Q ss_pred EEEeccCCccccCCCCceeeEeeecccccccCCcccC---CCCCCchhHHHHHHHHHHHHHhCCCCccccCCCCccccHH
Q 011360 351 ACISDLGLAMAIPDGYTRVLISYVLGTMAYIAPEYFQ---QPELSEKCDIFSFGMLLISLVRGVPSFVFHQNGEEICSPE 427 (487)
Q Consensus 351 ~kl~DFg~s~~~~~~~~~~~~~~~~gt~~y~aPE~l~---~~~~~~~~DvwslG~~l~elltg~~pf~~~~~~~~~~~~~ 427 (487)
+|++|||.+-.+...... ...+.||+.|||||+-. .+.|...+|||++|+...|+---++|-. +.....
T Consensus 151 vklaDfgvsaqitati~K--rksfiGtpywmapEvaaverkggynqlcdiwa~gitAiel~eLqpplf------dlhpmr 222 (829)
T KOG0576|consen 151 VKLADFGVSAQITATIAK--RKSFIGTPYWMAPEVAAVERKGGYNQLCDIWALGITAIELGELQPPLF------DLHPMR 222 (829)
T ss_pred eeecccCchhhhhhhhhh--hhcccCCccccchhHHHHHhcccccccccccccccchhhhhhcCCccc------ccchHH
Confidence 999999998766443322 24578999999999764 5689999999999999999998877651 111111
Q ss_pred HHHHHHhcCC-CCCccCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCChHHHHH
Q 011360 428 WLRKVMNSKN-PSRAIDPRLPGNGYEKKMLHVLKIAYICTLHDPEERPNSQYVRC 481 (487)
Q Consensus 428 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~~il~ 481 (487)
.+.-+.+.+. +...-|+ ......|-++++.|+-++|++|||++.++.
T Consensus 223 ~l~LmTkS~~qpp~lkDk-------~kws~~fh~fvK~altknpKkRptaeklL~ 270 (829)
T KOG0576|consen 223 ALFLMTKSGFQPPTLKDK-------TKWSEFFHNFVKGALTKNPKKRPTAEKLLQ 270 (829)
T ss_pred HHHHhhccCCCCCcccCC-------ccchHHHHHHHHHHhcCCCccCCChhhhee
Confidence 1211222211 1111111 223345778888899999999999998764
No 402
>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]
Probab=99.95 E-value=3.1e-28 Score=230.64 Aligned_cols=199 Identities=25% Similarity=0.367 Sum_probs=163.9
Q ss_pred cccccccccccccceeEEEEEecCC--CCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccC-CCCCcc
Q 011360 192 DCFASLEKIGSGGCGEVYKAELPGS--NGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQI-RHRNIL 268 (487)
Q Consensus 192 ~~~~~~~~lg~G~~g~v~~~~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpnIv 268 (487)
+.|..++++|.|.|+.||++..... .++.||+|.+.... ...++..|++++..+ .+.||+
T Consensus 36 ~~~~~v~kigeGsFssv~~a~~~~~~~~~~~valk~i~~ts-----------------~p~ri~~El~~L~~~gG~~ni~ 98 (418)
T KOG1167|consen 36 NAYKVVNKIGEGSFSSVYKATDIEQDTKRRYVALKAIYRTS-----------------SPSRILNELEMLYRLGGSDNII 98 (418)
T ss_pred hhhhhhccccccchhhhhhhhHhhhccccceEeeeeccccc-----------------CchHHHHHHHHHHHhccchhhh
Confidence 4589999999999999999976542 67899999884322 234578899999988 789999
Q ss_pred ccceEEecCCeeEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCC-
Q 011360 269 PLLAHMVRPDCHLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVLLND- 347 (487)
Q Consensus 269 ~l~~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nill~~- 347 (487)
++.+++..++...+||||+++....++... ++...+..+++.+..||.++ |.+|||||||||+|+|.+.
T Consensus 99 ~~~~~~rnnd~v~ivlp~~~H~~f~~l~~~-------l~~~~i~~Yl~~ll~Al~~~---h~~GIvHRDiKpsNFL~n~~ 168 (418)
T KOG1167|consen 99 KLNGCFRNNDQVAIVLPYFEHDRFRDLYRS-------LSLAEIRWYLRNLLKALAHL---HKNGIVHRDIKPSNFLYNRR 168 (418)
T ss_pred cchhhhccCCeeEEEecccCccCHHHHHhc-------CCHHHHHHHHHHHHHHhhhh---hccCccccCCCccccccccc
Confidence 999999999999999999999999998754 66889999999999999999 8999999999999999985
Q ss_pred CCCEEEeccCCccccC-----------------C--C-----------------------CceeeEeeecccccccCCcc
Q 011360 348 DMEACISDLGLAMAIP-----------------D--G-----------------------YTRVLISYVLGTMAYIAPEY 385 (487)
Q Consensus 348 ~~~~kl~DFg~s~~~~-----------------~--~-----------------------~~~~~~~~~~gt~~y~aPE~ 385 (487)
.+.-.|.|||++.... . + ..........||++|.|||+
T Consensus 169 t~rg~LvDFgLA~~~d~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~p~g~~~~~~~~r~~~~anrAGT~GfRaPEv 248 (418)
T KOG1167|consen 169 TQRGVLVDFGLAQRYDGYQQTEHSRSYSGRHATPAMGKDVHCQSVATASKPAGYYRRCNDGRPSERANRAGTPGFRAPEV 248 (418)
T ss_pred cCCceEEechhHHHHHhhhhhhhhhhhhcccCCccccCcccccccccccCCCCceeccCCCccceecccCCCCCCCchHH
Confidence 4667899999986210 0 0 00001123569999999999
Q ss_pred cCC-CCCCchhHHHHHHHHHHHHHhCCCCcccc
Q 011360 386 FQQ-PELSEKCDIFSFGMLLISLVRGVPSFVFH 417 (487)
Q Consensus 386 l~~-~~~~~~~DvwslG~~l~elltg~~pf~~~ 417 (487)
+.. +..+.++||||.|+++..++++..||...
T Consensus 249 L~k~~~QttaiDiws~GVI~Lslls~~~PFf~a 281 (418)
T KOG1167|consen 249 LFRCPRQTTAIDIWSAGVILLSLLSRRYPFFKA 281 (418)
T ss_pred HhhccCcCCccceeeccceeehhhccccccccC
Confidence 875 46789999999999999999999999433
No 403
>smart00221 STYKc Protein kinase; unclassified specificity. Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.
Probab=99.95 E-value=6.7e-27 Score=217.03 Aligned_cols=200 Identities=31% Similarity=0.448 Sum_probs=167.6
Q ss_pred cccccccccccceeEEEEEecCCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCCCCccccceE
Q 011360 194 FASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQIRHRNILPLLAH 273 (487)
Q Consensus 194 ~~~~~~lg~G~~g~v~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~ 273 (487)
|.+.+.||.|++|.||++... .++..+++|.+...... .....+.+|+..++.++|+|+++++++
T Consensus 1 ~~~~~~i~~g~~~~v~~~~~~-~~~~~~~iK~~~~~~~~--------------~~~~~~~~e~~~~~~~~~~~i~~~~~~ 65 (225)
T smart00221 1 YELGKKLGEGAFGKVYLARDK-GTGELVAVKVLKKEKTE--------------KQREEFLREIRILKKLKHPNIVKLYGV 65 (225)
T ss_pred CceeeEeecCCCeEEEEEEEc-CCCcEEEEEeeccccch--------------HHHHHHHHHHHHHHhCCCCChhhheee
Confidence 456788999999999999764 45789999988431110 245678889999999999999999999
Q ss_pred EecCCeeEEEEEecCCCCHHHHHhhhhcCCCC-CChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCCEE
Q 011360 274 MVRPDCHLLVYEFMKNGSLQDILDDVSRGRRE-LDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVLLNDDMEAC 352 (487)
Q Consensus 274 ~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~~-l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nill~~~~~~k 352 (487)
+......++++||+++++|.+++... .. +++..+..++.+++.++.+| |+.+++|+||+|.||+++.++.++
T Consensus 66 ~~~~~~~~~v~e~~~~~~L~~~~~~~----~~~~~~~~~~~~~~~l~~~l~~l---h~~~i~h~di~~~ni~v~~~~~~~ 138 (225)
T smart00221 66 FEDPEPLYLVMEYCEGGDLFDYLRKK----GGKLSEEEARFYLRQILEALEYL---HSLGIVHRDLKPENILLGMDGLVK 138 (225)
T ss_pred eecCCceEEEEeccCCCCHHHHHHhc----ccCCCHHHHHHHHHHHHHHHHHH---HhCCeecCCCCHHHEEEcCCCCEE
Confidence 99989999999999999999998752 22 78899999999999999999 667899999999999999999999
Q ss_pred EeccCCccccCCCCceeeEeeecccccccCCccc-CCCCCCchhHHHHHHHHHHHHHhCCCCccc
Q 011360 353 ISDLGLAMAIPDGYTRVLISYVLGTMAYIAPEYF-QQPELSEKCDIFSFGMLLISLVRGVPSFVF 416 (487)
Q Consensus 353 l~DFg~s~~~~~~~~~~~~~~~~gt~~y~aPE~l-~~~~~~~~~DvwslG~~l~elltg~~pf~~ 416 (487)
|+|||.+......... ......++..|++||.+ ....++.++|+|+||+++++|++|+.||..
T Consensus 139 l~d~g~~~~~~~~~~~-~~~~~~~~~~~~~pe~~~~~~~~~~~~Dv~~lG~~~~~l~~g~~pf~~ 202 (225)
T smart00221 139 LADFGLARFIHRDLAA-LLKTVKGTPFYLAPEVLLGGKGYGEAVDIWSLGVILYELLWGPEPFSG 202 (225)
T ss_pred EeeCceeeEecCcccc-cccceeccCCcCCHhHhcCCCCCCchhhHHHHHHHHHHHHHCCCCccc
Confidence 9999998876544211 11334578899999998 666788899999999999999999999933
No 404
>PLN00181 protein SPA1-RELATED; Provisional
Probab=99.94 E-value=2.2e-27 Score=259.78 Aligned_cols=196 Identities=15% Similarity=0.147 Sum_probs=139.0
Q ss_pred cCCC-CCccccceEE-------ecCCeeEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCC
Q 011360 261 QIRH-RNILPLLAHM-------VRPDCHLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSAS 332 (487)
Q Consensus 261 ~l~h-pnIv~l~~~~-------~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~g 332 (487)
.+.| +||+++++++ ....+++++|||+ +++|.++|.. ....+++..++.++.||+.||.|| |++|
T Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~-~~~L~~~l~~---~~~~~~~~~~~~i~~qi~~al~~l---H~~g 100 (793)
T PLN00181 28 SLSHIDYVRSLLGSHKEGNLDGLDDDSIVRALECE-DVSLRQWLDN---PDRSVDAFECFHVFRQIVEIVNAA---HSQG 100 (793)
T ss_pred hhhHHHHHHHhhcccCCccccccccchhhhhhccC-CccHHHHHhc---ccccccHHHHHHHHHHHHHHHHHH---HhCC
Confidence 3456 6888888877 2335677889987 6799999963 245689999999999999999999 7889
Q ss_pred eeecCCCCCCEEeCCC-------------------CCEEEeccCCccccCCCCc--------------eeeEeeeccccc
Q 011360 333 IIHGDIKPRNVLLNDD-------------------MEACISDLGLAMAIPDGYT--------------RVLISYVLGTMA 379 (487)
Q Consensus 333 ivH~Dlkp~Nill~~~-------------------~~~kl~DFg~s~~~~~~~~--------------~~~~~~~~gt~~ 379 (487)
|+||||||+|||++.. +.+|++|||+++....... ........||+.
T Consensus 101 IvHrDlKP~NiLl~~~~~~k~~d~~~~~~~~~~~~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~ 180 (793)
T PLN00181 101 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDEDATTKSREIGSSRREEILSERRIEKLEEVKKQPFPMKQILAMEMSW 180 (793)
T ss_pred eeeccCCchhEEEcccCcEEEeeccccCcccccccCcccccccccccccccccccchhhhhccccCCCcccccccCCCcc
Confidence 9999999999999653 4456666666653211000 000112357889
Q ss_pred ccCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCccccCCCCccccHHHHHHHHhcCCCCCccCCCCCCCCcHHHHHHHH
Q 011360 380 YIAPEYFQQPELSEKCDIFSFGMLLISLVRGVPSFVFHQNGEEICSPEWLRKVMNSKNPSRAIDPRLPGNGYEKKMLHVL 459 (487)
Q Consensus 380 y~aPE~l~~~~~~~~~DvwslG~~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 459 (487)
|+|||++.+..|+.++|||||||++|||++|.+|+.... ........... ++... .......
T Consensus 181 Y~APE~~~~~~~~~~sDVwSlGviL~ELl~~~~~~~~~~--------~~~~~~~~~~~-----~~~~~-----~~~~~~~ 242 (793)
T PLN00181 181 YTSPEEDNGSSSNCASDVYRLGVLLFELFCPVSSREEKS--------RTMSSLRHRVL-----PPQIL-----LNWPKEA 242 (793)
T ss_pred eEChhhhccCCCCchhhhhhHHHHHHHHhhCCCchhhHH--------HHHHHHHHhhc-----Chhhh-----hcCHHHH
Confidence 999999999999999999999999999999988873211 11111111111 11110 1112356
Q ss_pred HHHhhccCCCCCCCCChHHHHH
Q 011360 460 KIAYICTLHDPEERPNSQYVRC 481 (487)
Q Consensus 460 ~li~~cl~~~P~~RPs~~~il~ 481 (487)
.++.+||+++|.+|||+.++++
T Consensus 243 ~~~~~~L~~~P~~Rps~~eil~ 264 (793)
T PLN00181 243 SFCLWLLHPEPSCRPSMSELLQ 264 (793)
T ss_pred HHHHHhCCCChhhCcChHHHhh
Confidence 7888999999999999999975
No 405
>smart00750 KIND kinase non-catalytic C-lobe domain. It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features
Probab=99.93 E-value=1.3e-25 Score=200.81 Aligned_cols=166 Identities=20% Similarity=0.195 Sum_probs=124.3
Q ss_pred CCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCCEEEeccCCccccCCCCcee
Q 011360 290 GSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVLLNDDMEACISDLGLAMAIPDGYTRV 369 (487)
Q Consensus 290 gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nill~~~~~~kl~DFg~s~~~~~~~~~~ 369 (487)
|+|.+++.. .+..+++..++.++.|++.||.|| |+.+ ||+||+++.++.+|+ ||++.......
T Consensus 1 GsL~~~l~~---~~~~l~~~~~~~i~~qi~~~L~~l---H~~~------kp~Nil~~~~~~~~~--fG~~~~~~~~~--- 63 (176)
T smart00750 1 VSLADILEV---RGRPLNEEEIWAVCLQCLRALREL---HRQA------KSGNILLTWDGLLKL--DGSVAFKTPEQ--- 63 (176)
T ss_pred CcHHHHHHH---hCCCCCHHHHHHHHHHHHHHHHHH---HhcC------CcccEeEcCccceee--ccceEeecccc---
Confidence 689999874 245699999999999999999999 5554 999999999999999 99987654321
Q ss_pred eEeeecccccccCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCccccCCCCccccHHHHHHHHhcCCCCCccCCCCCCC
Q 011360 370 LISYVLGTMAYIAPEYFQQPELSEKCDIFSFGMLLISLVRGVPSFVFHQNGEEICSPEWLRKVMNSKNPSRAIDPRLPGN 449 (487)
Q Consensus 370 ~~~~~~gt~~y~aPE~l~~~~~~~~~DvwslG~~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 449 (487)
..||+.|+|||++.+..++.++|||||||++|||+||..||...... ............... .... .
T Consensus 64 ----~~g~~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~p~~~~~~~-----~~~~~~~~~~~~~~~--~~~~--~ 130 (176)
T smart00750 64 ----SRVDPYFMAPEVIQGQSYTEKADIYSLGITLYEALDYELPYNEEREL-----SAILEILLNGMPADD--PRDR--S 130 (176)
T ss_pred ----CCCcccccChHHhcCCCCcchhhHHHHHHHHHHHHhCCCCccccchh-----cHHHHHHHHHhccCC--cccc--c
Confidence 25899999999999999999999999999999999999999433221 112222222111110 0000 1
Q ss_pred CcHHHHH--HHHHHHhhccCCCCCCCCChHHHHHHHhh
Q 011360 450 GYEKKML--HVLKIAYICTLHDPEERPNSQYVRCRLSQ 485 (487)
Q Consensus 450 ~~~~~~~--~l~~li~~cl~~~P~~RPs~~~il~~L~~ 485 (487)
....... .+.+++.+||..+|.+|||+.++++.+..
T Consensus 131 ~~~~~~~~~~~~~~i~~cl~~~p~~Rp~~~~ll~~~~~ 168 (176)
T smart00750 131 NLESVSAARSFADFMRVCASRLPQRREAANHYLAHCRA 168 (176)
T ss_pred cHHHHHhhhhHHHHHHHHHhcccccccCHHHHHHHHHH
Confidence 1122223 58999999999999999999999987754
No 406
>PRK09188 serine/threonine protein kinase; Provisional
Probab=99.91 E-value=2.3e-24 Score=211.01 Aligned_cols=169 Identities=20% Similarity=0.202 Sum_probs=128.0
Q ss_pred cccccccccccccceeEEEEEecCCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCCCCccccc
Q 011360 192 DCFASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQIRHRNILPLL 271 (487)
Q Consensus 192 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~ 271 (487)
+.|.+.+.||+|+||+||+|.+...++..+|||++..... ..........+.+|+.++.+++|+||+..+
T Consensus 18 ~~Y~~~~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~----------~~~~~~~~~~~~~E~~iL~~L~h~~iv~~l 87 (365)
T PRK09188 18 ARFVETAVLKRDVFSTVERGYFAGDPGTARAVRRRVSEVP----------WWSKPLARHLAAREIRALKTVRGIGVVPQL 87 (365)
T ss_pred CCceEccEEeecCcEEEEEEEEcCCCCeEEEEEEeccccc----------ccccHHHHHHHHHHHHHHHhccCCCCCcEE
Confidence 4699999999999999999987655778889998631100 000122345688999999999999998633
Q ss_pred eEEecCCeeEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCC-CCCCEEeCCCCC
Q 011360 272 AHMVRPDCHLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDI-KPRNVLLNDDME 350 (487)
Q Consensus 272 ~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dl-kp~Nill~~~~~ 350 (487)
.. .+..|+||||++|++|.. +. . . . ...++.+++++|.|| |++||+|||| ||+|||++.++.
T Consensus 88 ~~---~~~~~LVmE~~~G~~L~~-~~---~-~---~---~~~~~~~i~~aL~~l---H~~gIiHrDL~KP~NILv~~~~~ 150 (365)
T PRK09188 88 LA---TGKDGLVRGWTEGVPLHL-AR---P-H---G---DPAWFRSAHRALRDL---HRAGITHNDLAKPQNWLMGPDGE 150 (365)
T ss_pred EE---cCCcEEEEEccCCCCHHH-hC---c-c---c---hHHHHHHHHHHHHHH---HHCCCeeCCCCCcceEEEcCCCC
Confidence 22 245799999999999962 21 1 1 1 146788999999999 7789999999 999999999999
Q ss_pred EEEeccCCccccCCCCceee------EeeecccccccCCcccC
Q 011360 351 ACISDLGLAMAIPDGYTRVL------ISYVLGTMAYIAPEYFQ 387 (487)
Q Consensus 351 ~kl~DFg~s~~~~~~~~~~~------~~~~~gt~~y~aPE~l~ 387 (487)
+||+|||+++.......... ..+..+++.|+|||.+.
T Consensus 151 ikLiDFGlA~~~~~~~~~~~~~~~~d~~~~~~~~~~~~pe~~~ 193 (365)
T PRK09188 151 AAVIDFQLASVFRRRGALYRIAAYEDLRHLLKHKRTYAPDALT 193 (365)
T ss_pred EEEEECccceecccCcchhhhhhhhhhhhhhccCccCCcccCC
Confidence 99999999987654432211 13456888999999886
No 407
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=99.91 E-value=8.5e-25 Score=195.64 Aligned_cols=251 Identities=24% Similarity=0.361 Sum_probs=189.1
Q ss_pred cccccccccccceeEEEEEecCCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCCCCccccceE
Q 011360 194 FASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQIRHRNILPLLAH 273 (487)
Q Consensus 194 ~~~~~~lg~G~~g~v~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~ 273 (487)
...+.+|.+...|..|+|+|. |..+++|++.. ........+.|..|.-.++-+.||||+.+++.
T Consensus 192 lnl~tkl~e~hsgelwrgrwq---gndivakil~v-------------r~~t~risrdfneefp~lrifshpnilpvlga 255 (448)
T KOG0195|consen 192 LNLITKLAESHSGELWRGRWQ---GNDIVAKILNV-------------REVTARISRDFNEEFPALRIFSHPNILPVLGA 255 (448)
T ss_pred hhhhhhhccCCCccccccccc---Ccchhhhhhhh-------------hhcchhhcchhhhhCcceeeecCCchhhhhhh
Confidence 566678899999999999994 55677776622 22333455678889999999999999999999
Q ss_pred EecCCeeEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCCEEE
Q 011360 274 MVRPDCHLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVLLNDDMEACI 353 (487)
Q Consensus 274 ~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nill~~~~~~kl 353 (487)
|..+.++.++..||+.|||...|.. ..+-..+-.++.+++.++++|++|||+... -|.---|....++++++.+++|
T Consensus 256 cnsppnlv~isq~mp~gslynvlhe--~t~vvvd~sqav~faldiargmaflhslep-~ipr~~lns~hvmidedltari 332 (448)
T KOG0195|consen 256 CNSPPNLVIISQYMPFGSLYNVLHE--QTSVVVDHSQAVRFALDIARGMAFLHSLEP-MIPRFYLNSKHVMIDEDLTARI 332 (448)
T ss_pred ccCCCCceEeeeeccchHHHHHHhc--CccEEEecchHHHHHHHHHhhHHHHhhcch-hhhhhhcccceEEecchhhhhe
Confidence 9999999999999999999999975 344556778899999999999999987643 2555568889999999988776
Q ss_pred e--ccCCccccCCCCceeeEeeecccccccCCcccCCCCCC---chhHHHHHHHHHHHHHhCCCCccccCCCCccccHHH
Q 011360 354 S--DLGLAMAIPDGYTRVLISYVLGTMAYIAPEYFQQPELS---EKCDIFSFGMLLISLVRGVPSFVFHQNGEEICSPEW 428 (487)
Q Consensus 354 ~--DFg~s~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~---~~~DvwslG~~l~elltg~~pf~~~~~~~~~~~~~~ 428 (487)
+ |--++... ....-.|.|++||.++..+-+ .++|+|||++++||+.|...||..-++.+..
T Consensus 333 smad~kfsfqe---------~gr~y~pawmspealqrkped~n~raadmwsfaillwel~trevpfadlspmecg----- 398 (448)
T KOG0195|consen 333 SMADTKFSFQE---------VGRAYSPAWMSPEALQRKPEDLNIRAADMWSFAILLWELNTREVPFADLSPMECG----- 398 (448)
T ss_pred ecccceeeeec---------cccccCcccCCHHHHhcCchhcchhhhhHHHHHHHHHHhhccccccccCCchhhh-----
Confidence 3 43332221 122357899999999865433 4789999999999999999999655443221
Q ss_pred HHHHHhcCCCCCccCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCChHHHHHHHhhhC
Q 011360 429 LRKVMNSKNPSRAIDPRLPGNGYEKKMLHVLKIAYICTLHDPEERPNSQYVRCRLSQLL 487 (487)
Q Consensus 429 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~~il~~L~~ll 487 (487)
.++. -+.+...+|+. .+.++.+++.-|+..||.+||.+..|+-.|++++
T Consensus 399 -mkia-----leglrv~ippg----is~hm~klm~icmnedpgkrpkfdmivpilekm~ 447 (448)
T KOG0195|consen 399 -MKIA-----LEGLRVHIPPG----ISRHMNKLMNICMNEDPGKRPKFDMIVPILEKMI 447 (448)
T ss_pred -hhhh-----hccccccCCCC----ccHHHHHHHHHHhcCCCCcCCCcceehhhHHHhc
Confidence 1111 11122223322 3356889999999999999999999999888763
No 408
>KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.91 E-value=1.9e-23 Score=192.06 Aligned_cols=200 Identities=25% Similarity=0.315 Sum_probs=169.8
Q ss_pred ccccccccccccceeEEEEEecCCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccC-CCCCccccc
Q 011360 193 CFASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQI-RHRNILPLL 271 (487)
Q Consensus 193 ~~~~~~~lg~G~~g~v~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpnIv~l~ 271 (487)
.|.+.++||+|+||.++.|+ +.-++++||||.- ...+..-++..|....+.| ..++|...|
T Consensus 29 hyrVGkKIGeGsFG~lf~G~-Nl~nne~VAIKfE-----------------PrkS~APQLrdEYr~YKlL~g~~GIP~vY 90 (449)
T KOG1165|consen 29 HYRVGKKIGEGSFGVLFLGK-NLYNNEPVAIKFE-----------------PRKSEAPQLRDEYRTYKLLGGTEGIPQVY 90 (449)
T ss_pred cceeccccccCcceeeeccc-ccccCceEEEEec-----------------cccCCcchHHHHHHHHHHHcCCCCCCcee
Confidence 49999999999999999996 5678999999953 2334456778888888877 679999999
Q ss_pred eEEecCCeeEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCC---
Q 011360 272 AHMVRPDCHLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVLLNDD--- 348 (487)
Q Consensus 272 ~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nill~~~--- 348 (487)
.+...+-+..+|||.+ |.||.|+++- .++.|+..++..++.|++.-++|+ |++.+|+|||||+|+||..-
T Consensus 91 YFGqeG~~NiLVidLL-GPSLEDLFD~---CgR~FSvKTV~miA~Qmi~rie~v---H~k~LIYRDIKPdNFLIGrp~~k 163 (449)
T KOG1165|consen 91 YFGQEGKYNILVIDLL-GPSLEDLFDL---CGRRFSVKTVAMIAKQMITRIEYV---HEKDLIYRDIKPDNFLIGRPGTK 163 (449)
T ss_pred eeccccchhhhhhhhh-CcCHHHHHHH---hcCcccHHhHHHHHHHHHHHHHHH---HhcceeecccCccceeecCCCCC
Confidence 8888888888999998 8999999873 578899999999999999999999 56669999999999999743
Q ss_pred --CCEEEeccCCccccCCCCceee-----EeeecccccccCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCcccc
Q 011360 349 --MEACISDLGLAMAIPDGYTRVL-----ISYVLGTMAYIAPEYFQQPELSEKCDIFSFGMLLISLVRGVPSFVFH 417 (487)
Q Consensus 349 --~~~kl~DFg~s~~~~~~~~~~~-----~~~~~gt~~y~aPE~l~~~~~~~~~DvwslG~~l~elltg~~pf~~~ 417 (487)
..+.++|||+++...+..+... .....||.+||+-..+.+..-+.+-|+-|||-++++.+.|..||.+-
T Consensus 164 ~~n~IhiiDFGmAK~YrDp~TkqHIPYrE~KSLsGTARYMSINTHlGrEQSRRDDLEaLGHvFmYFLRGsLPWQGL 239 (449)
T KOG1165|consen 164 DANVIHIIDFGMAKEYRDPKTKQHIPYREHKSLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGL 239 (449)
T ss_pred CCceEEEEeccchhhhcCccccccCccccccccccceeeeEeeccccchhhhhhhHHHhhhhhhhhccCCCccccc
Confidence 3478999999998766544322 23457999999999999988899999999999999999999999554
No 409
>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.91 E-value=4.6e-24 Score=187.94 Aligned_cols=263 Identities=24% Similarity=0.267 Sum_probs=195.5
Q ss_pred hccccccccccccccceeEEEEEecCCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCC-CCCcc
Q 011360 190 KEDCFASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQIR-HRNIL 268 (487)
Q Consensus 190 ~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-hpnIv 268 (487)
....|.+++.||.|+||.+|+|. ...+|..||||.-.. .....++..|..+...|+ ...|.
T Consensus 13 v~gky~lvrkiGsGSFGdIy~~~-~i~~ge~VAiK~Es~-----------------~a~hpqL~yEskvY~iL~~g~GiP 74 (341)
T KOG1163|consen 13 VGGKYKLVRKIGSGSFGDIYLGI-SITSGEEVAIKLESS-----------------KAKHPQLLYESKVYRILQGGVGIP 74 (341)
T ss_pred eccceEEEEeecCCchhheeeee-eccCCceEEEEeecc-----------------cCCCcchhHHHHHHHHhccCCCCc
Confidence 34569999999999999999996 456899999997521 222345677888888885 46788
Q ss_pred ccceEEecCCeeEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCC-
Q 011360 269 PLLAHMVRPDCHLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVLLND- 347 (487)
Q Consensus 269 ~l~~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nill~~- 347 (487)
.+..+..+.+.-.+||+.. |.||.+++.. ....++..+++-++-|++.-++|+ |.++++||||||+|+|+.-
T Consensus 75 ~i~~y~~e~~ynvlVMdLL-GPsLEdLfnf---C~R~ftmkTvLMLaDQml~RiEyv---H~r~fiHRDIKPdNFLMGlg 147 (341)
T KOG1163|consen 75 HIRHYGTEKDYNVLVMDLL-GPSLEDLFNF---CSRRFTMKTVLMLADQMLSRIEYV---HLRNFIHRDIKPDNFLMGLG 147 (341)
T ss_pred hhhhhccccccceeeeecc-CccHHHHHHH---HhhhhhHHhHHHHHHHHHHHHHHH---HhhccccccCCccceeeccc
Confidence 8888888888889999998 8999999874 356799999999999999999999 7778999999999999974
Q ss_pred --CCCEEEeccCCccccCCCCcee-----eEeeecccccccCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCccccCCC
Q 011360 348 --DMEACISDLGLAMAIPDGYTRV-----LISYVLGTMAYIAPEYFQQPELSEKCDIFSFGMLLISLVRGVPSFVFHQNG 420 (487)
Q Consensus 348 --~~~~kl~DFg~s~~~~~~~~~~-----~~~~~~gt~~y~aPE~l~~~~~~~~~DvwslG~~l~elltg~~pf~~~~~~ 420 (487)
...+.++|||+|+...+..+.. ......||.+|.+-..+.+..-+.+-|+-|+|.++.++-.|..||.+-...
T Consensus 148 rh~~kl~LIDFGLaKky~d~~t~~HIpyre~r~ltGTaRYASinAh~g~eqSRRDDmeSvgYvLmYfnrG~LPWQglka~ 227 (341)
T KOG1163|consen 148 RHCNKLYLIDFGLAKKYRDIRTRQHIPYREDRNLTGTARYASINAHLGIEQSRRDDMESVGYVLMYFNRGSLPWQGLKAA 227 (341)
T ss_pred cccceEEEEeccchhhhccccccccCccccCCccceeeeehhhhhhhhhhhhhhhhhhhhcceeeeeecCCCcccccchh
Confidence 3568899999998765433221 123467999999988888777788999999999999999999999655433
Q ss_pred CccccHHHHHHHHhcCCCCCccCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCChHHHHHHHhhh
Q 011360 421 EEICSPEWLRKVMNSKNPSRAIDPRLPGNGYEKKMLHVLKIAYICTLHDPEERPNSQYVRCRLSQL 486 (487)
Q Consensus 421 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~~il~~L~~l 486 (487)
......+.+...- -..+.+.+-..+| .++.-.+..|-..--++-|...-|.+.++.+
T Consensus 228 tk~QKyEkI~EkK-~s~~ie~LC~G~P--------~EF~myl~Y~R~L~F~E~Pdy~ylrqlFriL 284 (341)
T KOG1163|consen 228 TKKQKYEKISEKK-MSTPIEVLCKGFP--------AEFAMYLNYCRGLGFEEKPDYMYLRQLFRIL 284 (341)
T ss_pred hHHHHHHHHHHhh-cCCCHHHHhCCCc--------HHHHHHHHHHhhcCCCCCCcHHHHHHHHHHH
Confidence 2222222222111 1112222222222 4577777778777777888887777666543
No 410
>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.90 E-value=2.7e-23 Score=203.83 Aligned_cols=261 Identities=23% Similarity=0.239 Sum_probs=186.8
Q ss_pred ccccccccccccceeEEEEEecCCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCC----CCCcc
Q 011360 193 CFASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQIR----HRNIL 268 (487)
Q Consensus 193 ~~~~~~~lg~G~~g~v~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~----hpnIv 268 (487)
.|.+.+.||.|+||.||.+.........+|+|....... .....+..|..++..+. .+++.
T Consensus 19 ~~~i~~~iG~G~fG~V~~v~~~~~~~~~~a~K~e~~~~~---------------~~~~~l~~E~~vl~~l~~~~~~~~~~ 83 (322)
T KOG1164|consen 19 RYKLGKKIGEGGFGAVYLVSDKSEKNKEYAKKLEKKELG---------------SKPSVLKIEIQVLKKLEKKNGPSHFP 83 (322)
T ss_pred ceEEeeeccccCCceEEEEEecCCCCeeEEEEEEEeccc---------------CCCccchhHHHHHHHHhhhcCCCCCC
Confidence 699999999999999999975433346788887633110 00114555666666664 36889
Q ss_pred ccceEE-ecCCeeEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCC
Q 011360 269 PLLAHM-VRPDCHLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVLLND 347 (487)
Q Consensus 269 ~l~~~~-~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nill~~ 347 (487)
.+++.. ......|+||+.+ |.+|.++..... .+.++..++..++.|++.+|.++ |+.|++||||||.|+++..
T Consensus 84 ~~~~~G~~~~~~~~iVM~l~-G~sL~dl~~~~~--~~~fs~~T~l~ia~q~l~~l~~l---H~~G~iHRDiKp~N~~~g~ 157 (322)
T KOG1164|consen 84 KLLDHGRSTEDFNFIVMSLL-GPSLEDLRKRNP--PGRFSRKTVLRIAIQNLNALEDL---HSKGFIHRDIKPENFVVGQ 157 (322)
T ss_pred EEEEeccCCCceeEEEEecc-CccHHHHHHhCC--CCCcCHhHHHHHHHHHHHHHHHH---HhcCcccCCcCHHHeeecC
Confidence 999888 4777889999988 889999886532 57899999999999999999999 8889999999999999986
Q ss_pred C-----CCEEEeccCCcc--ccCCCCce------eeEeeecccccccCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCc
Q 011360 348 D-----MEACISDLGLAM--AIPDGYTR------VLISYVLGTMAYIAPEYFQQPELSEKCDIFSFGMLLISLVRGVPSF 414 (487)
Q Consensus 348 ~-----~~~kl~DFg~s~--~~~~~~~~------~~~~~~~gt~~y~aPE~l~~~~~~~~~DvwslG~~l~elltg~~pf 414 (487)
. -.+.|.|||+++ ........ .......||.+|+++.++.+...+.+.|+||++.++.++..|..||
T Consensus 158 ~~~~~~~~~~llDfGlar~~~~~~~~~~~~~~~r~~~~~~rGT~ry~S~~~H~~~e~~r~DDles~~Y~l~el~~g~LPW 237 (322)
T KOG1164|consen 158 SSRSEVRTLYLLDFGLARRFKYVGDSGGNLRPPRPQKGLFRGTLRYASINVHLGIEQGRRDDLESLFYMLLELLKGSLPW 237 (322)
T ss_pred CCCcccceEEEEecCCCccccccCCCCcccccCCCCccCCCCccccccHHHhCCCccCCchhhhhHHHHHHHHhcCCCCC
Confidence 5 358999999998 32111110 1012356999999999999999999999999999999999999999
Q ss_pred cccCCCCccccHHHHHHHHhcCCCCCccCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCChHHHHHHHhhh
Q 011360 415 VFHQNGEEICSPEWLRKVMNSKNPSRAIDPRLPGNGYEKKMLHVLKIAYICTLHDPEERPNSQYVRCRLSQL 486 (487)
Q Consensus 415 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~~il~~L~~l 486 (487)
........ ............... .....+ ..+.++...+-..+...+|....+...|++.
T Consensus 238 ~~~~~~~~---~~~~~~~~~~~~~~~------~~~~~~---~~~~~~~~~~~~~~~~~~Pdy~~~~~~l~~~ 297 (322)
T KOG1164|consen 238 EALEMTDL---KSKFEKDPRKLLTDR------FGDLKP---EEFAKILEYIDSLDYEDKPDYEKLAELLKDV 297 (322)
T ss_pred ccccccch---HHHHHHHhhhhcccc------ccCCCh---HHHHHHHHHhhccCCcCCCCHHHHHHHHHHH
Confidence 54433221 111111111111100 011111 2344555555557999999999998887653
No 411
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.90 E-value=2.6e-24 Score=224.21 Aligned_cols=261 Identities=22% Similarity=0.234 Sum_probs=190.9
Q ss_pred ccccccccccceeEEEEEecCCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCCCCccccceEE
Q 011360 195 ASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQIRHRNILPLLAHM 274 (487)
Q Consensus 195 ~~~~~lg~G~~g~v~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~ 274 (487)
.....+|.|++|.++.... ....+.++.|.+... .. ...........+..|+.+-..+.|||++..+..+
T Consensus 321 ~~~~~~g~ga~g~~~~~~~-~~~~~~~~~~~~r~~-~~--------~~~s~~~~~~~i~sE~~i~~~l~h~~~~e~l~~~ 390 (601)
T KOG0590|consen 321 KPGRVLGSGAYGSVRIAKR-RSDLKSFPEKEFRVR-VK--------PTESERKYNYNITSEFCIGSSLSHPNIIETLDIV 390 (601)
T ss_pred CccceeeecccCceEEEEe-cCCCccchhhhhhcc-cC--------CcccHHHHhhhhhhheeecccccCCchhhhHHHH
Confidence 4567899999997777753 234444555543211 00 0111122222377888889999999999988877
Q ss_pred ecCCeeEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCCEEEe
Q 011360 275 VRPDCHLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVLLNDDMEACIS 354 (487)
Q Consensus 275 ~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nill~~~~~~kl~ 354 (487)
.+....+-.||||++ +|..++.. ...+....+..++.|+..|++|+ |+.||.|||+|++|++++.+|.+||+
T Consensus 391 ~~~~~~~~~mE~~~~-Dlf~~~~~----~~~~~~~e~~c~fKqL~~Gv~y~---h~~GiahrdlK~enll~~~~g~lki~ 462 (601)
T KOG0590|consen 391 QEIDGILQSMEYCPY-DLFSLVMS----NGKLTPLEADCFFKQLLRGVKYL---HSMGLAHRDLKLENLLVTENGILKII 462 (601)
T ss_pred hhcccchhhhhcccH-HHHHHHhc----ccccchhhhhHHHHHHHHHHHHH---HhcCceeccCccccEEEecCCceEEe
Confidence 776666666999999 99999864 34678888999999999999999 88999999999999999999999999
Q ss_pred ccCCccccCCCCce--eeEeeecccccccCCcccCCCCCCc-hhHHHHHHHHHHHHHhCCCCccccCCCCccccHHHHHH
Q 011360 355 DLGLAMAIPDGYTR--VLISYVLGTMAYIAPEYFQQPELSE-KCDIFSFGMLLISLVRGVPSFVFHQNGEEICSPEWLRK 431 (487)
Q Consensus 355 DFg~s~~~~~~~~~--~~~~~~~gt~~y~aPE~l~~~~~~~-~~DvwslG~~l~elltg~~pf~~~~~~~~~~~~~~~~~ 431 (487)
|||.+......... ......+|+..|+|||++.+..|++ ..||||.|++++.|++|+.||.......... .
T Consensus 463 Dfg~~~vf~~~~e~~~~~~~g~~gS~pY~apE~~~~~~ydpr~vDiwS~~ii~~~m~~~~~~Wk~a~~~~~~~------~ 536 (601)
T KOG0590|consen 463 DFGAASVFRYPWEKNIHESSGIVGSDPYLAPEVLTGKEYDPRAVDVWSCGIIYICMILGRFPWKVAKKSDNSF------K 536 (601)
T ss_pred ecCcceeeccCcchhhhhhcCcccCCcCcCcccccccccCcchhhhhhccceEEEEecCCCccccccccccch------h
Confidence 99999877655544 4456678999999999999998876 5799999999999999999996655433221 0
Q ss_pred HHhcCCCCCccCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCChHHHHH
Q 011360 432 VMNSKNPSRAIDPRLPGNGYEKKMLHVLKIAYICTLHDPEERPNSQYVRC 481 (487)
Q Consensus 432 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~~il~ 481 (487)
......... ...-+.......+.+...+|.++|+.+|.+|.|+++|++
T Consensus 537 ~~~~~~~~~--~~~~~~~~~~~lp~~~~~~~~~~l~~~P~~R~ti~~i~~ 584 (601)
T KOG0590|consen 537 TNNYSDQRN--IFEGPNRLLSLLPRETRIIIYRMLQLDPTKRITIEQILN 584 (601)
T ss_pred hhccccccc--cccChHHHHHhchhhHHHHHHHHccCChhheecHHHHhh
Confidence 000000000 000011122334456889999999999999999999975
No 412
>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]
Probab=99.89 E-value=1e-21 Score=192.20 Aligned_cols=264 Identities=30% Similarity=0.415 Sum_probs=194.0
Q ss_pred cccccccccccceeEEEEEecCCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCCC-Cccccce
Q 011360 194 FASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQIRHR-NILPLLA 272 (487)
Q Consensus 194 ~~~~~~lg~G~~g~v~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp-nIv~l~~ 272 (487)
|.+...||.|+||.||.+... ..+++|.+.... .........+.+|+.+++.+.|+ +|+++++
T Consensus 2 ~~~~~~l~~g~~~~v~~~~~~----~~~~~k~~~~~~------------~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~ 65 (384)
T COG0515 2 YRILRKLGEGSFGEVYLARDR----KLVALKVLAKKL------------ESKSKEVERFLREIQILASLNHPPNIVKLYD 65 (384)
T ss_pred ceeEEeecCCCCeEEEEEEec----cEEEEEeechhh------------ccchhHHHHHHHHHHHHHHccCCcceeeEEE
Confidence 567788999999999999753 678999873311 11113567788899999999888 7999999
Q ss_pred EEecCCeeEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCC-CE
Q 011360 273 HMVRPDCHLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVLLNDDM-EA 351 (487)
Q Consensus 273 ~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nill~~~~-~~ 351 (487)
.+......+++++++.++++.+++...... ..++......+..|++.++.|+ |..|++|||+||+||+++..+ .+
T Consensus 66 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~---H~~~~~hrd~kp~nil~~~~~~~~ 141 (384)
T COG0515 66 FFQDEGSLYLVMEYVDGGSLEDLLKKIGRK-GPLSESEALFILAQILSALEYL---HSKGIIHRDIKPENILLDRDGRVV 141 (384)
T ss_pred EEecCCEEEEEEecCCCCcHHHHHHhcccc-cCCCHHHHHHHHHHHHHHHHHH---HhCCeeccCCCHHHeeecCCCCeE
Confidence 997777789999999999999776542111 3688889999999999999999 778899999999999999988 69
Q ss_pred EEeccCCccccCCCCcee----eEeeecccccccCCcccCC---CCCCchhHHHHHHHHHHHHHhCCCCccccCCCCccc
Q 011360 352 CISDLGLAMAIPDGYTRV----LISYVLGTMAYIAPEYFQQ---PELSEKCDIFSFGMLLISLVRGVPSFVFHQNGEEIC 424 (487)
Q Consensus 352 kl~DFg~s~~~~~~~~~~----~~~~~~gt~~y~aPE~l~~---~~~~~~~DvwslG~~l~elltg~~pf~~~~~~~~~~ 424 (487)
+++|||.+.......... ......|+..|+|||.+.+ ..++..+|+||+|++++++++|..||...... .
T Consensus 142 ~l~dfg~~~~~~~~~~~~~~~~~~~~~~~t~~~~~pe~~~~~~~~~~~~~~D~~s~g~~~~~~~~~~~p~~~~~~~---~ 218 (384)
T COG0515 142 KLIDFGLAKLLPDPGSTSSIPALPSTSVGTPGYMAPEVLLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEKNS---S 218 (384)
T ss_pred EEeccCcceecCCCCccccccccccccccccccCCHHHhcCCCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCcc---c
Confidence 999999998654433221 2356679999999999987 57889999999999999999999997444321 0
Q ss_pred cHHHHHHHHhcCCCCCccCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCChHHHHH
Q 011360 425 SPEWLRKVMNSKNPSRAIDPRLPGNGYEKKMLHVLKIAYICTLHDPEERPNSQYVRC 481 (487)
Q Consensus 425 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~~il~ 481 (487)
............... .................+.+++..|+..+|..|.+..+...
T Consensus 219 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~ 274 (384)
T COG0515 219 ATSQTLKIILELPTP-SLASPLSPSNPELISKAASDLLKKLLAKDPKNRLSSSSDLS 274 (384)
T ss_pred cHHHHHHHHHhcCCc-ccccccCccccchhhHHHHHHHHHHHhcCchhcCCHHHHhh
Confidence 111122222211111 00001111100222346778899999999999999887654
No 413
>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c
Probab=99.86 E-value=1.8e-21 Score=175.47 Aligned_cols=155 Identities=19% Similarity=0.196 Sum_probs=111.5
Q ss_pred ccccccccceeEEEEEecCCCCceEEEEEeeecCchhHHH--HHH---------HhhhhhhHHHHHHHHHHHHhccCCCC
Q 011360 197 LEKIGSGGCGEVYKAELPGSNGKMIAIKKVIVYAPISAAE--LIE---------EDSKLRDSKLRQIRSEIITASQIRHR 265 (487)
Q Consensus 197 ~~~lg~G~~g~v~~~~~~~~~~~~vavK~~~~~~~~~~~~--~~~---------~~~~~~~~~~~~~~~E~~~l~~l~hp 265 (487)
...||.|+||.||+|... +|+.||||++....+..... ... ...............|+..+..+.++
T Consensus 2 ~~~ig~G~~~~Vy~a~~~--~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~ 79 (190)
T cd05147 2 NGCISTGKEANVYHATTA--NGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRLVTA 79 (190)
T ss_pred CCccccccceEEEEEECC--CCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHHHHC
Confidence 468999999999999753 79999999996543211110 000 00001111123445699999999888
Q ss_pred CccccceEEecCCeeEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEe
Q 011360 266 NILPLLAHMVRPDCHLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVLL 345 (487)
Q Consensus 266 nIv~l~~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nill 345 (487)
++.....+... ..+|||||++|+++...... ...++...+..++.|++.+|.++| |+.||+||||||+||++
T Consensus 80 ~v~~p~~~~~~--~~~iVmE~i~g~~l~~~~~~----~~~~~~~~~~~i~~qi~~~L~~l~--H~~giiHrDlkP~NIli 151 (190)
T cd05147 80 GIPCPEPILLK--SHVLVMEFIGDDGWAAPRLK----DAPLSESKARELYLQVIQIMRILY--QDCRLVHADLSEYNLLY 151 (190)
T ss_pred CCCCCcEEEec--CCEEEEEEeCCCCCcchhhh----cCCCCHHHHHHHHHHHHHHHHHHH--HhCCcccCCCCHHHEEE
Confidence 87554443322 23899999988877654321 356888999999999999999996 67789999999999999
Q ss_pred CCCCCEEEeccCCcccc
Q 011360 346 NDDMEACISDLGLAMAI 362 (487)
Q Consensus 346 ~~~~~~kl~DFg~s~~~ 362 (487)
+ ++.++|+|||+|...
T Consensus 152 ~-~~~v~LiDFG~a~~~ 167 (190)
T cd05147 152 H-DGKLYIIDVSQSVEH 167 (190)
T ss_pred E-CCcEEEEEccccccC
Confidence 8 478999999998754
No 414
>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]
Probab=99.86 E-value=2.3e-22 Score=209.77 Aligned_cols=249 Identities=24% Similarity=0.317 Sum_probs=178.3
Q ss_pred ccccccccccccceeEEEEEecCCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCCCCccccce
Q 011360 193 CFASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQIRHRNILPLLA 272 (487)
Q Consensus 193 ~~~~~~~lg~G~~g~v~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~ 272 (487)
.+...+.||.+.|=+|.+|+++ .|. |+||++....+.- .-....+...|+. ...++|||.+++.-
T Consensus 24 e~~~~~~LGstRFlKv~r~k~~--eG~-vVvKVFvk~~p~~-----------sL~~~~qrL~~ik-~~l~~~pn~lPfqk 88 (1431)
T KOG1240|consen 24 ECHYVENLGSTRFLKVARAKDR--EGL-VVVKVFVKQDPTI-----------SLRPFKQRLEEIK-FALMKAPNCLPFQK 88 (1431)
T ss_pred ceeeecccCchhhhhhhhccCC--Cce-EEEEEEeccCCCC-----------CchHHHHHHHHHH-HHhhcCCcccchHH
Confidence 4777889999999999999764 454 9999986533221 1112223334444 55679999999999
Q ss_pred EEecCCeeEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCCEE
Q 011360 273 HMVRPDCHLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVLLNDDMEAC 352 (487)
Q Consensus 273 ~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nill~~~~~~k 352 (487)
+.......|+|=+|..+ +|.|.+.. +.-+...+.+.|+.|++.||..+ |..||+|||||.+|||++.=+-+.
T Consensus 89 ~~~t~kAAylvRqyvkh-nLyDRlST----RPFL~~iEKkWiaFQLL~al~qc---H~~gVcHGDIKsENILiTSWNW~~ 160 (1431)
T KOG1240|consen 89 VLVTDKAAYLVRQYVKH-NLYDRLST----RPFLVLIEKKWIAFQLLKALSQC---HKLGVCHGDIKSENILITSWNWLY 160 (1431)
T ss_pred HHHhhHHHHHHHHHHhh-hhhhhhcc----chHHHHHHHHHHHHHHHHHHHHH---HHcCccccccccceEEEeeechhh
Confidence 88888888999999844 89998864 45567778889999999999999 889999999999999999888899
Q ss_pred EeccCCccccC--CCCce---eeEeeecccccccCCcccCC-----------CCCCchhHHHHHHHHHHHHHh-CCCCcc
Q 011360 353 ISDLGLAMAIP--DGYTR---VLISYVLGTMAYIAPEYFQQ-----------PELSEKCDIFSFGMLLISLVR-GVPSFV 415 (487)
Q Consensus 353 l~DFg~s~~~~--~~~~~---~~~~~~~gt~~y~aPE~l~~-----------~~~~~~~DvwslG~~l~ellt-g~~pf~ 415 (487)
|+||..-+... ..... ....+...-.+|.|||.+-. +..+++.||||+||++.||++ |++||.
T Consensus 161 LtDFAsFKPtYLPeDNPadf~fFFDTSrRRtCYiAPERFv~~~~~~~~~q~~~~L~paMDIFS~GCViaELf~Eg~PlF~ 240 (1431)
T KOG1240|consen 161 LTDFASFKPTYLPEDNPADFTFFFDTSRRRTCYIAPERFVSALGKTSVGQDAPLLTPAMDIFSAGCVIAELFLEGRPLFT 240 (1431)
T ss_pred hhcccccCCccCCCCCcccceEEEecCCceeeecChHhhhccccccccCCcccccChhhhhhhhhHHHHHHHhcCCCccc
Confidence 99998764331 11111 11112223357999997642 126789999999999999999 799993
Q ss_pred ccC-----CCCccccHHHHHHHHhcCCCCCccCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCChHHHHHHHhh
Q 011360 416 FHQ-----NGEEICSPEWLRKVMNSKNPSRAIDPRLPGNGYEKKMLHVLKIAYICTLHDPEERPNSQYVRCRLSQ 485 (487)
Q Consensus 416 ~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~~il~~L~~ 485 (487)
... .+. ...++..... ++. ..++.++..|++.||++|.|+++.++..+.
T Consensus 241 LSQL~aYr~~~-~~~~e~~Le~-------------Ied-------~~~Rnlil~Mi~rdPs~RlSAedyL~~yrG 294 (1431)
T KOG1240|consen 241 LSQLLAYRSGN-ADDPEQLLEK-------------IED-------VSLRNLILSMIQRDPSKRLSAEDYLQKYRG 294 (1431)
T ss_pred HHHHHhHhccC-ccCHHHHHHh-------------CcC-------ccHHHHHHHHHccCchhccCHHHHHHhhhc
Confidence 221 110 1111111111 111 138899999999999999999999987543
No 415
>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A.
Probab=99.85 E-value=2.1e-21 Score=182.27 Aligned_cols=238 Identities=21% Similarity=0.280 Sum_probs=150.0
Q ss_pred ccccccccccccceeEEEEEecCCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCC--------
Q 011360 193 CFASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQIRH-------- 264 (487)
Q Consensus 193 ~~~~~~~lg~G~~g~v~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h-------- 264 (487)
.+.....||.|+++.||.+++ ..+|+.+|+|++....... ....+.+.+|.-....+.+
T Consensus 13 ~l~~~~~i~~g~~~~v~~v~d-~~t~~~~avkvf~~~~~~~------------~~~~~~~~~e~l~~~~~~~~~~p~~a~ 79 (288)
T PF14531_consen 13 TLVRGRIIGKGGFSIVFEVTD-VETGEEFAVKVFLLPADAS------------ANEYEQLKEEQLAITLFPGVKNPKEAY 79 (288)
T ss_dssp EEEEEEEEEEETTEEEEEEEE-TTTTEEEEEEEEEESSTTH------------TTHHHHHHHHHHGGGGSTT--SHHHHH
T ss_pred EEEEccccccCCceEEEEEEE-ccCCceEEEEEEecccccc------------hHHHHHHHHHHHHhhhhccCCCHHHHH
Confidence 356778999999999999974 5789999999997654221 2234444444444333221
Q ss_pred --CCccccceEEe---------cC---C-----eeEEEEEecCCCCHHHHHhhhhc---CCCCCChHHHHHHHHHHHHHH
Q 011360 265 --RNILPLLAHMV---------RP---D-----CHLLVYEFMKNGSLQDILDDVSR---GRRELDWPSRHRIALGVASGL 322 (487)
Q Consensus 265 --pnIv~l~~~~~---------~~---~-----~~~lv~E~~~~gsL~~~l~~~~~---~~~~l~~~~~~~i~~qi~~~L 322 (487)
-.++-.++... .. . +.+++|+-+ .++|.+++..... ....+....+..+..|+++.+
T Consensus 80 ~~~r~l~P~d~~~i~~~~~~~~~~~~~~~~~v~n~~~l~P~~-~~dL~~~~~~l~~~~~~~~~l~~~arl~lT~Q~I~lv 158 (288)
T PF14531_consen 80 RHLRFLVPLDLLRIPGKPPFFERGPGQSIYWVLNRFLLMPRA-QGDLQDLVEALFSRAQTHSPLAFAARLSLTVQMIRLV 158 (288)
T ss_dssp HHH-B---SEEEEETTS-SEEEECETTEEEEEESEEEEEE---SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHH
T ss_pred HhceEEeeeEEEEEcCCCcceecCCCCccceeehhhhccchh-hhcHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHH
Confidence 12222222221 11 1 236788877 5689888654222 122344555677789999999
Q ss_pred HHHHhcCCCCeeecCCCCCCEEeCCCCCEEEeccCCccccCCCCceeeEeeecccccccCCcccCC--------CCCCch
Q 011360 323 EYLHMYHSASIIHGDIKPRNVLLNDDMEACISDLGLAMAIPDGYTRVLISYVLGTMAYIAPEYFQQ--------PELSEK 394 (487)
Q Consensus 323 ~~Lh~~h~~givH~Dlkp~Nill~~~~~~kl~DFg~s~~~~~~~~~~~~~~~~gt~~y~aPE~l~~--------~~~~~~ 394 (487)
++| |+.|+||+||+|+|++++.+|.++|+||+.....+.... ....+..|.+||.... ..++.+
T Consensus 159 A~L---h~~GlVHgdi~~~nfll~~~G~v~Lg~F~~~~r~g~~~~-----~~~~~~~~~PPe~~~~~~~~~~~~~~~t~~ 230 (288)
T PF14531_consen 159 ANL---HSYGLVHGDIKPENFLLDQDGGVFLGDFSSLVRAGTRYR-----CSEFPVAFTPPELESCAGQFGQNNAPYTFA 230 (288)
T ss_dssp HHH---HHTTEEEST-SGGGEEE-TTS-EEE--GGGEEETTEEEE-----GGGS-TTTS-HHHHHHHTSCHHSEEEE-HH
T ss_pred HHH---hhcceEecccceeeEEEcCCCCEEEcChHHHeecCceee-----ccCCCcccCChhhhhhhcccCcccceeeec
Confidence 999 788999999999999999999999999988765433211 1235678999997643 257889
Q ss_pred hHHHHHHHHHHHHHhCCCCccccCCCCccccHHHHHHHHhcCCCCCccCCCCCCCCcHHHHHHHHHHHhhccCCCCCCC
Q 011360 395 CDIFSFGMLLISLVRGVPSFVFHQNGEEICSPEWLRKVMNSKNPSRAIDPRLPGNGYEKKMLHVLKIAYICTLHDPEER 473 (487)
Q Consensus 395 ~DvwslG~~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~R 473 (487)
.|.|+||+++|.|++|..||........... . + ..|. +.++.+..+|..+|+.||.+|
T Consensus 231 ~DaW~LG~~ly~lWC~~lPf~~~~~~~~~~~-----------~--------f-~~C~-~~Pe~v~~LI~~lL~~~~~~R 288 (288)
T PF14531_consen 231 TDAWQLGITLYSLWCGRLPFGLSSPEADPEW-----------D--------F-SRCR-DMPEPVQFLIRGLLQRNPEDR 288 (288)
T ss_dssp HHHHHHHHHHHHHHHSS-STCCCGGGSTSGG-----------G--------G-TTSS----HHHHHHHHHHT-SSGGGS
T ss_pred cCHHHHHHHHHHHHHccCCCCCCCccccccc-----------c--------c-hhcC-CcCHHHHHHHHHHccCCcccC
Confidence 9999999999999999999965433222110 0 1 1333 566779999999999999988
No 416
>KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms]
Probab=99.85 E-value=4.1e-21 Score=191.42 Aligned_cols=217 Identities=24% Similarity=0.371 Sum_probs=164.0
Q ss_pred hccCCCCCccccceEEecCCeeEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCC
Q 011360 259 ASQIRHRNILPLLAHMVRPDCHLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDI 338 (487)
Q Consensus 259 l~~l~hpnIv~l~~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dl 338 (487)
|+.+.|.|+.+++|.+.++...++|.+||..|+|.+.+.. ....+++.....+.++|+.||.|+| ++....|+.+
T Consensus 1 l~~l~h~n~~~f~g~~~~~~~~~~i~~~c~rGsl~D~i~~---~~~~~d~~F~~s~~rdi~~Gl~ylh--~s~i~~hg~l 75 (484)
T KOG1023|consen 1 LRQLDHDNLNKFIGASVDGPEMIVIWEYCSRGSLLDILSN---EDIKLDYFFILSFIRDISKGLAYLH--NSPIGYHGAL 75 (484)
T ss_pred CcccchhhhhhheeeEecCCceEEEEeeecCccHHhHHhc---cccCccHHHHHHHHHHHHHHHHHHh--cCcceeeeee
Confidence 4568999999999999999999999999999999999974 3567888899999999999999997 4454599999
Q ss_pred CCCCEEeCCCCCEEEeccCCccccCCCCceeeEeeecccccccCCcccCCC-------CCCchhHHHHHHHHHHHHHhCC
Q 011360 339 KPRNVLLNDDMEACISDLGLAMAIPDGYTRVLISYVLGTMAYIAPEYFQQP-------ELSEKCDIFSFGMLLISLVRGV 411 (487)
Q Consensus 339 kp~Nill~~~~~~kl~DFg~s~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~-------~~~~~~DvwslG~~l~elltg~ 411 (487)
++.|++++....+||+|||+.................-..-|.|||.+... ..+.+.||||||++++|+++..
T Consensus 76 ~s~nClvd~~w~lklt~~Gl~~~~~~~~~~~~~~~~~~~~lw~aPellr~~~~~~~~~~~~~~gdiYs~~ii~~ei~~r~ 155 (484)
T KOG1023|consen 76 KSSNCLVDSRWVLKLTDFGLNSLLEETAEPEAHHPIRKALLWTAPELLRGALSQSLESALTQKGDIYSFGIIMYEILFRS 155 (484)
T ss_pred ccccceeeeeEEEEechhhhcccccccccccccchhHHHHhccCHHHhcccccccccccccccCCeehHHHHHHHHHhcc
Confidence 999999999999999999998766431111111122234569999998763 1467799999999999999999
Q ss_pred CCccccCCCCccccHHHHHHHHhcCCCCCccCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCChHHHHHHHhhh
Q 011360 412 PSFVFHQNGEEICSPEWLRKVMNSKNPSRAIDPRLPGNGYEKKMLHVLKIAYICTLHDPEERPNSQYVRCRLSQL 486 (487)
Q Consensus 412 ~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~~il~~L~~l 486 (487)
.||......... .+.+..+.. .....+.|.+.... +....+..++..||..+|.+||++.+|...++.+
T Consensus 156 ~~~~~~~~~~~~--~eii~~~~~--~~~~~~rP~i~~~~--e~~~~l~~l~~~cw~e~P~~rPs~~~i~~~~~~~ 224 (484)
T KOG1023|consen 156 GPFDLRNLVEDP--DEIILRVKK--GGSNPFRPSIELLN--ELPPELLLLVARCWEEIPEKRPSIEQIRSKLLTI 224 (484)
T ss_pred CccccccccCCh--HHHHHHHHh--cCCCCcCcchhhhh--hcchHHHHHHHHhcccChhhCccHHHHHhhhhhh
Confidence 999654333222 233333322 12222333333221 3334688999999999999999999999888754
No 417
>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional
Probab=99.85 E-value=1.5e-21 Score=177.99 Aligned_cols=181 Identities=13% Similarity=0.132 Sum_probs=130.4
Q ss_pred hccccccccccccccceeEEEEEecCCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCCCCccc
Q 011360 190 KEDCFASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQIRHRNILP 269 (487)
Q Consensus 190 ~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~ 269 (487)
-.++|..++.+|.|+||.||++.. ++..+|+|.+....+...... ..-.....+.+|+..+.++.||+|..
T Consensus 29 l~~~y~~~~~l~~~~f~~v~l~~~---~~~~~iiKvf~~~~~~~~~~~------~~f~~g~~~e~Ea~~l~rL~~~GI~~ 99 (232)
T PRK10359 29 LSYNIKTIKVFRNIDDTKVSLIDT---DYGKYILKVFAPKVKRTERFL------KSFVKGDYYENLIVQTDRVRSEGLAS 99 (232)
T ss_pred hhCceEEEEEecCCCceEEEEEec---CCCcEEEEEechhcCchHHHH------HhhhhhHHHHHHHHHHHHHHHCCCCc
Confidence 356799999999999999999743 466899998843221111000 00001223678999999999999999
Q ss_pred cceEEecC--------CeeEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCC
Q 011360 270 LLAHMVRP--------DCHLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPR 341 (487)
Q Consensus 270 l~~~~~~~--------~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~ 341 (487)
+..++... ...+++|||++|.+|.++.. ++. ....+++.++..+ |+.|++|||++|+
T Consensus 100 ~~d~~~~~~~~~~~~~~~~~lvmEyi~G~tL~~~~~--------~~~----~~~~~i~~~l~~l---H~~gi~H~Dikp~ 164 (232)
T PRK10359 100 LNDFYLLAERKTLRYAHTYIMLIEYIEGVELNDMPE--------ISE----DVKAKIKASIESL---HQHGMVSGDPHKG 164 (232)
T ss_pred ceEeeeecccccccccCCeEEEEEEECCccHHHhhh--------ccH----HHHHHHHHHHHHH---HHcCCccCCCChH
Confidence 99886543 35789999999999987632 222 2456888999999 8889999999999
Q ss_pred CEEeCCCCCEEEeccCCccccCCCCceeeEeeecccccccCCcccCCCCCCchhHHHHHHHHHHHHHh
Q 011360 342 NVLLNDDMEACISDLGLAMAIPDGYTRVLISYVLGTMAYIAPEYFQQPELSEKCDIFSFGMLLISLVR 409 (487)
Q Consensus 342 Nill~~~~~~kl~DFg~s~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DvwslG~~l~ellt 409 (487)
||+++++| ++|+|||........... .-++....|+.++|+|+||+++..+..
T Consensus 165 Nili~~~g-i~liDfg~~~~~~e~~a~--------------d~~vler~y~~~~di~~lg~~~~~~~~ 217 (232)
T PRK10359 165 NFIVSKNG-LRIIDLSGKRCTAQRKAK--------------DRIDLERHYGIKNEIKDLGYYLLIYKK 217 (232)
T ss_pred HEEEeCCC-EEEEECCCcccccchhhH--------------HHHHHHhHhcccccccceeEeehHHHH
Confidence 99999988 999999987654221110 013334456778999999998865543
No 418
>PRK12274 serine/threonine protein kinase; Provisional
Probab=99.84 E-value=2.5e-20 Score=166.27 Aligned_cols=191 Identities=17% Similarity=0.088 Sum_probs=137.4
Q ss_pred ccccccccccceeEEEEEecCCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccC-CCCCccccceE
Q 011360 195 ASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQI-RHRNILPLLAH 273 (487)
Q Consensus 195 ~~~~~lg~G~~g~v~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpnIv~l~~~ 273 (487)
.+...|+.|+||+|+++.- .+..++.+.+..... -........+.+|+.+++++ .|++|.+++++
T Consensus 5 ~~~~~l~~~~f~~v~~~~~---~~~k~~~~~l~~~~~-----------~~~~~~~~l~~rE~~iL~~L~~~~~vP~ll~~ 70 (218)
T PRK12274 5 AVNEPLKSDTFGRILLVRG---GERKFVRRDLSAAPW-----------WLRGVAWWLARREALALRQLDGLPRTPRLLHW 70 (218)
T ss_pred ccceeecCCCcceEEEeec---CCceeeecccccchh-----------hhhhHHHHHHHHHHHHHHhcCCCCCCCEEEEE
Confidence 4567899999999997742 677788776522110 01111223578999999999 45889999886
Q ss_pred EecCCeeEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCC-CCCCEEeCCCCCEE
Q 011360 274 MVRPDCHLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDI-KPRNVLLNDDMEAC 352 (487)
Q Consensus 274 ~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dl-kp~Nill~~~~~~k 352 (487)
+..+++|||+.|.+|...+.. ....++.|++.+|.++ |++||+|||| ||.|||++.++.++
T Consensus 71 ----~~~~lvmeyI~G~~L~~~~~~-----------~~~~~~~qi~~~L~~l---H~~GIvHrDL~kp~NILv~~~g~i~ 132 (218)
T PRK12274 71 ----DGRHLDRSYLAGAAMYQRPPR-----------GDLAYFRAARRLLQQL---HRCGVAHNDLAKEANWLVQEDGSPA 132 (218)
T ss_pred ----cCEEEEEeeecCccHHhhhhh-----------hhHHHHHHHHHHHHHH---HHCcCccCCCCCcceEEEcCCCCEE
Confidence 446899999999998654321 1134678999999999 8889999999 79999999999999
Q ss_pred EeccCCccccCCCCce----e-------eEeeecccccccCCcccCCC-CCC-chhHHHHHHHHHHHHHhCCCCcccc
Q 011360 353 ISDLGLAMAIPDGYTR----V-------LISYVLGTMAYIAPEYFQQP-ELS-EKCDIFSFGMLLISLVRGVPSFVFH 417 (487)
Q Consensus 353 l~DFg~s~~~~~~~~~----~-------~~~~~~gt~~y~aPE~l~~~-~~~-~~~DvwslG~~l~elltg~~pf~~~ 417 (487)
|+|||++......... . .......++.|++|+.-.-. ..+ ...++++-|+.+|.++|+..|+-..
T Consensus 133 LIDFG~A~~~~~~~~~~r~L~~rDl~~llk~~~~y~~~~l~~~~~~~l~~~~~~~~~w~~~g~~~~~~~~~~~~~~~~ 210 (218)
T PRK12274 133 VIDFQLAVRGNPRARWMRLLAREDLRHLLKHKRMYCPAALTPVERRVLKRTSWIRELWFATGKPVYRFVTRRVLHWED 210 (218)
T ss_pred EEECCCceecCCcchHHHHHHHHHHHHHHHHHHhcCCCCCCHHHHhhhccchhHHHHHHHhcchHHHHHhccCCcccc
Confidence 9999999865443210 0 00112357778888754322 233 5679999999999999998887443
No 419
>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro
Probab=99.83 E-value=5.4e-20 Score=166.35 Aligned_cols=155 Identities=21% Similarity=0.255 Sum_probs=112.5
Q ss_pred ccccccccceeEEEEEecCCCCceEEEEEeeecCchhH--HHHHHHh---------hhhhhHHHHHHHHHHHHhccCCCC
Q 011360 197 LEKIGSGGCGEVYKAELPGSNGKMIAIKKVIVYAPISA--AELIEED---------SKLRDSKLRQIRSEIITASQIRHR 265 (487)
Q Consensus 197 ~~~lg~G~~g~v~~~~~~~~~~~~vavK~~~~~~~~~~--~~~~~~~---------~~~~~~~~~~~~~E~~~l~~l~hp 265 (487)
...||.|++|.||+|... +|+.||||++....+... .+..... .............|...+.++.|+
T Consensus 2 ~~~ig~G~~~~Vy~a~~~--~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~ 79 (190)
T cd05145 2 NGCISTGKEANVYHARTG--DGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRLYEA 79 (190)
T ss_pred CceeecCCCcEEEEEEcC--CCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHHHhC
Confidence 468999999999999754 799999999876432111 1110000 001111223446789999999999
Q ss_pred CccccceEEecCCeeEEEEEecCCCCHHHH-HhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCC-CCeeecCCCCCCE
Q 011360 266 NILPLLAHMVRPDCHLLVYEFMKNGSLQDI-LDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHS-ASIIHGDIKPRNV 343 (487)
Q Consensus 266 nIv~l~~~~~~~~~~~lv~E~~~~gsL~~~-l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~-~givH~Dlkp~Ni 343 (487)
+|.....+.... .++||||++|+++... +. ...++......++.|++.++.++ |. .||+||||||+||
T Consensus 80 ~i~~p~~~~~~~--~~lVmE~~~g~~~~~~~l~-----~~~~~~~~~~~i~~~l~~~l~~l---H~~~givHrDlkP~NI 149 (190)
T cd05145 80 GVPVPEPILLKK--NVLVMEFIGDDGSPAPRLK-----DVPLEEEEAEELYEQVVEQMRRL---YQEAGLVHGDLSEYNI 149 (190)
T ss_pred CCCCceEEEecC--CEEEEEEecCCCchhhhhh-----hccCCHHHHHHHHHHHHHHHHHH---HHhCCEecCCCChhhE
Confidence 886655544432 4899999988755433 32 24567788899999999999999 55 8999999999999
Q ss_pred EeCCCCCEEEeccCCccccCC
Q 011360 344 LLNDDMEACISDLGLAMAIPD 364 (487)
Q Consensus 344 ll~~~~~~kl~DFg~s~~~~~ 364 (487)
+++ ++.++|+|||++.....
T Consensus 150 ll~-~~~~~liDFG~a~~~~~ 169 (190)
T cd05145 150 LYH-DGKPYIIDVSQAVELDH 169 (190)
T ss_pred EEE-CCCEEEEEcccceecCC
Confidence 999 88999999999976543
No 420
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=99.81 E-value=2.9e-21 Score=192.40 Aligned_cols=229 Identities=21% Similarity=0.244 Sum_probs=174.5
Q ss_pred ccccccceeEEEEEe--cCCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCC-CCCccccceEEe
Q 011360 199 KIGSGGCGEVYKAEL--PGSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQIR-HRNILPLLAHMV 275 (487)
Q Consensus 199 ~lg~G~~g~v~~~~~--~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-hpnIv~l~~~~~ 275 (487)
.+|.|.||+|+++.- ....+.-+|.|.......... .......|..++...+ ||.+|++...+.
T Consensus 1 vlg~g~~gkvfLvrk~~g~da~~~yamkvl~k~t~~~~-------------~~~~t~~er~il~~~~~~~f~v~lhyafq 67 (612)
T KOG0603|consen 1 VLGQGSYGKVFLVRKAGGADAGHLYAMKVLKKATLKVR-------------DRTHTKQERIILAFVHNTPFLVKLHYAFQ 67 (612)
T ss_pred CCCcCCCcchHHHHHhccccccchhhhhcccccccccc-------------cccccccHHHHHhhccCCCceeeeeeeec
Confidence 379999999997742 122466788887643221111 1114455667777775 999999999999
Q ss_pred cCCeeEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCCEEEec
Q 011360 276 RPDCHLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVLLNDDMEACISD 355 (487)
Q Consensus 276 ~~~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nill~~~~~~kl~D 355 (487)
.+...+++++|..||.|...+.. ...+.......+...++-+++++ |..|++|||+|++||+++.+|++++.|
T Consensus 68 t~~kl~l~ld~~rgg~lft~l~~----~~~f~~~~~~~~~aelaLald~l---h~l~iiyrd~k~enilld~~Ghi~~td 140 (612)
T KOG0603|consen 68 TDGKLYLILDFLRGGDLFTRLSK----EVMFDELDVAFYLAELALALDHL---HKLGIAYRDYKLENVLLLLEGHIKLTD 140 (612)
T ss_pred cccchhHhhhhcccchhhhcccc----CCchHHHHHHHHHHHHHHHHhhc---chhHHHHhcccccceeecccCccccCC
Confidence 99999999999999999887753 55677777888888899999999 899999999999999999999999999
Q ss_pred cCCccccCCCCceeeEeeecccccccCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCccccCCCCccccHHHHHHHHhc
Q 011360 356 LGLAMAIPDGYTRVLISYVLGTMAYIAPEYFQQPELSEKCDIFSFGMLLISLVRGVPSFVFHQNGEEICSPEWLRKVMNS 435 (487)
Q Consensus 356 Fg~s~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DvwslG~~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~ 435 (487)
||+++..-.... .+||..|||||++. ..+.++|+||||++++||+||..||.. +....+...
T Consensus 141 fglske~v~~~~------~cgt~eymApEI~~--gh~~a~D~ws~gvl~felltg~~pf~~----------~~~~~Il~~ 202 (612)
T KOG0603|consen 141 FGLSKEAVKEKI------ACGTYEYRAPEIIN--GHLSAADWWSFGVLAFELLTGTLPFGG----------DTMKRILKA 202 (612)
T ss_pred chhhhHhHhhhh------cccchhhhhhHhhh--ccCCcccchhhhhhHHHHhhCCCCCch----------HHHHHHhhh
Confidence 999987544322 27999999999998 567889999999999999999999944 233333322
Q ss_pred CCCCCccCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCCh
Q 011360 436 KNPSRAIDPRLPGNGYEKKMLHVLKIAYICTLHDPEERPNS 476 (487)
Q Consensus 436 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~ 476 (487)
..+ ...+....+..++..++..+|.+|--.
T Consensus 203 ~~~-----------~p~~l~~~a~~~~~~l~~r~p~nrLg~ 232 (612)
T KOG0603|consen 203 ELE-----------MPRELSAEARSLFRQLFKRNPENRLGA 232 (612)
T ss_pred ccC-----------CchhhhHHHHHHHHHHHhhCHHHHhcc
Confidence 111 122344557778888888899888755
No 421
>KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.79 E-value=1.3e-18 Score=185.25 Aligned_cols=195 Identities=23% Similarity=0.283 Sum_probs=154.9
Q ss_pred hccccccccccccccceeEEEEEecCCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCC---CCC
Q 011360 190 KEDCFASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQIR---HRN 266 (487)
Q Consensus 190 ~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~---hpn 266 (487)
..+.|.+-+.+|.|+||+||+|... +|+.||+|+-....++..- --.+++.+|+ -+.
T Consensus 696 ~~~~~~I~~e~G~g~y~~vy~a~~~--~~~~~alK~e~P~~~WEfY------------------I~~q~~~RLk~~~~~~ 755 (974)
T KOG1166|consen 696 GGEKFCISKEIGEGSYGSVYVATHS--NGKLVALKVEKPPNPWEFY------------------ICLQVMERLKPQMLPS 755 (974)
T ss_pred cceeEEEEeeeccccceEEEEeecC--CCcEEEEEeecCCCceeee------------------ehHHHHHhhchhhhcc
Confidence 4456889999999999999999865 4999999987554433210 1111222222 245
Q ss_pred ccccceEEecCCeeEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeC
Q 011360 267 ILPLLAHMVRPDCHLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVLLN 346 (487)
Q Consensus 267 Iv~l~~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nill~ 346 (487)
|..+...+...+..++|+||.+.|+|.++++ ..+..++..+..++.|++..+.+| |..+||||||||+|+++.
T Consensus 756 ~~~~~~a~~~~~~S~lv~ey~~~Gtlld~~N----~~~~m~e~lv~~~~~qml~ive~l---H~~~IIHgDiKPDNfll~ 828 (974)
T KOG1166|consen 756 IMHISSAHVFQNASVLVSEYSPYGTLLDLIN----TNKVMDEYLVMFFSCQMLRIVEHL---HAMGIIHGDIKPDNFLLR 828 (974)
T ss_pred hHHHHHHHccCCcceeeeeccccccHHHhhc----cCCCCCchhhhHHHHHHHHHHHHH---HhcceecccCCcceeEee
Confidence 6666666666778889999999999999996 467789999999999999999999 677799999999999995
Q ss_pred C-------CCCEEEeccCCccccCCCCceeeEeeecccccccCCcccCCCCCCchhHHHHHHHHHHHHHhCC
Q 011360 347 D-------DMEACISDLGLAMAIPDGYTRVLISYVLGTMAYIAPEYFQQPELSEKCDIFSFGMLLISLVRGV 411 (487)
Q Consensus 347 ~-------~~~~kl~DFg~s~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DvwslG~~l~elltg~ 411 (487)
. +..++|+|||.+..+.--.........++|-.+-.+|...+..++..+|.|.|+.+++.|+.|+
T Consensus 829 ~~~~~~~~~~~l~lIDfG~siDm~lfp~~~~F~~~~~td~f~C~EM~~grpWtYq~DyfGlAa~~h~mLFG~ 900 (974)
T KOG1166|consen 829 REICADSDSKGLYLIDFGRSIDMKLFPDGTKFKAVWHTDLFDCIEMREGRPWTYQIDYFGLAATVHVMLFGK 900 (974)
T ss_pred cccCCCCcccceEEEecccceeeeEcCCCcEEeeeeccccchhHHHhcCCCCchhhhhHHHHHHHHHHHHHH
Confidence 2 3458999999998764433333446677899999999999999999999999999999999994
No 422
>PRK10345 hypothetical protein; Provisional
Probab=99.77 E-value=2.2e-18 Score=156.76 Aligned_cols=136 Identities=17% Similarity=0.235 Sum_probs=101.2
Q ss_pred ccccccccccceeEEEEEecCCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccC-----CCCCccc
Q 011360 195 ASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQI-----RHRNILP 269 (487)
Q Consensus 195 ~~~~~lg~G~~g~v~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-----~hpnIv~ 269 (487)
.-...||+|+||.||. +. .++.. +||++.... ....+.+.+|+.+++.+ .||||++
T Consensus 5 ~~~~~LG~G~~~~Vy~--hp-~~~~k-~IKv~~~~~---------------~~~~~~~~rEi~~l~~L~~~~~~h~nIvr 65 (210)
T PRK10345 5 SEQSPLGTGRHRKCYA--HP-EDAQR-CIKIVYHRG---------------DGGDKEIRRELKYYAHLSRRLIDWSGIPR 65 (210)
T ss_pred CCcceecCCCceEEEE--CC-CCcCe-EEEEEeccc---------------cchHHHHHHHHHHHHHhhccCCCCcccce
Confidence 3457899999999995 33 34444 688874311 11335678999999999 5799999
Q ss_pred cceEEecCC---eeE-EEEEe--cCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHH-HHHHhcCCCCeeecCCCCCC
Q 011360 270 LLAHMVRPD---CHL-LVYEF--MKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGL-EYLHMYHSASIIHGDIKPRN 342 (487)
Q Consensus 270 l~~~~~~~~---~~~-lv~E~--~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L-~~Lh~~h~~givH~Dlkp~N 342 (487)
+++++.++. .++ +|||| +.+|+|.+++.. ..+++. ..++.+++.++ +|| |+++|+||||||+|
T Consensus 66 ~yg~~et~~g~g~v~~~I~e~~G~~~~tL~~~l~~-----~~~~e~--~~~~~~~L~~l~~yL---h~~~IvhrDlKp~N 135 (210)
T PRK10345 66 YYGTVETDCGTGYVYDVIADFDGKPSITLTEFAEQ-----CRYEED--VAQLRQLLKKLKRYL---LDNRIVTMELKPQN 135 (210)
T ss_pred eeEEEEeCCCCeEEEEEEecCCCCcchhHHHHHHc-----ccccHh--HHHHHHHHHHHHHHH---HHCCEeecCCCHHH
Confidence 999998864 334 78999 557999999964 235544 35677777777 899 77789999999999
Q ss_pred EEeCC----CCCEEEeccCCc
Q 011360 343 VLLND----DMEACISDLGLA 359 (487)
Q Consensus 343 ill~~----~~~~kl~DFg~s 359 (487)
||++. ++.++|+||+-+
T Consensus 136 ILl~~~~~~~~~~~LiDg~G~ 156 (210)
T PRK10345 136 ILCQRISESEVIPVVCDNIGE 156 (210)
T ss_pred EEEeccCCCCCcEEEEECCCC
Confidence 99974 347999995433
No 423
>KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms]
Probab=99.75 E-value=5.7e-18 Score=159.65 Aligned_cols=198 Identities=20% Similarity=0.283 Sum_probs=134.9
Q ss_pred CCCCccccceEEec---------------------------CCeeEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHH
Q 011360 263 RHRNILPLLAHMVR---------------------------PDCHLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIA 315 (487)
Q Consensus 263 ~hpnIv~l~~~~~~---------------------------~~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~ 315 (487)
+|||||++.+.|.+ +..+|+||...+ .+|..++.. ...+.....-++
T Consensus 274 ~HPNIvri~~aF~dsv~~lPda~~~YPdalp~R~~p~g~g~~~tlylvMkrY~-~tLr~yl~~-----~~~s~r~~~~~l 347 (598)
T KOG4158|consen 274 KHPNIVRIQTAFIDSVKVLPDAIERYPDALPARWYPSGAGEPKTLYLVMKRYR-QTLREYLWT-----RHRSYRTGRVIL 347 (598)
T ss_pred CCCCEEeehhhhhhhhccCCchhhhCcccccceecccccCCCceEEEehhcch-hhHHHHHhc-----CCCchHHHHHHH
Confidence 69999999987743 224689999884 489999874 445666778899
Q ss_pred HHHHHHHHHHHhcCCCCeeecCCCCCCEEeC--CCC--CEEEeccCCccccCCCCcee----eEeeecccccccCCcccC
Q 011360 316 LGVASGLEYLHMYHSASIIHGDIKPRNVLLN--DDM--EACISDLGLAMAIPDGYTRV----LISYVLGTMAYIAPEYFQ 387 (487)
Q Consensus 316 ~qi~~~L~~Lh~~h~~givH~Dlkp~Nill~--~~~--~~kl~DFg~s~~~~~~~~~~----~~~~~~gt~~y~aPE~l~ 387 (487)
.|+++|+.|| |.+||.|||+|.+|||+. +|+ .+.|+|||.+-.-....-.. ..-..-|.-.-||||+..
T Consensus 348 aQlLEav~hL---~~hgvAhRDlKSDNiL~ElddD~~P~LVvaDFGCcLAd~~hGlqlpy~S~~Vd~GGNa~lmAPEi~t 424 (598)
T KOG4158|consen 348 AQLLEAVTHL---HKHGVAHRDLKSDNILLELDDDEIPQLVVADFGCCLADDNHGLQLPYESDEVDLGGNAKLMAPEIAT 424 (598)
T ss_pred HHHHHHHHHH---HHccchhhcccccceEEEecCCCCcEEEEcccceeeeccccccccccccccccCCCcceecchhhhh
Confidence 9999999999 888999999999999984 444 47899999764322211100 001123667789999876
Q ss_pred CCC------CCchhHHHHHHHHHHHHHhCCCCccccCCCCccccHHHHHHHHhcCCCCCccCCCCCCCCcHHHHHHHHHH
Q 011360 388 QPE------LSEKCDIFSFGMLLISLVRGVPSFVFHQNGEEICSPEWLRKVMNSKNPSRAIDPRLPGNGYEKKMLHVLKI 461 (487)
Q Consensus 388 ~~~------~~~~~DvwslG~~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 461 (487)
..+ --.|+|.|+.|.+.||+++...||-.... ... .....++.--|.+|+. .+..+.++
T Consensus 425 a~PGp~avvny~kAD~WA~GalaYEIfg~~NPFY~rGe--m~L---------~~r~Yqe~qLPalp~~----vpp~~rql 489 (598)
T KOG4158|consen 425 AVPGPNAVVNYEKADTWAAGALAYEIFGRSNPFYKRGE--MLL---------DTRTYQESQLPALPSR----VPPVARQL 489 (598)
T ss_pred cCCCCceeeccchhhhhhhhhhHHHHhccCCcccccch--hee---------chhhhhhhhCCCCccc----CChHHHHH
Confidence 321 12489999999999999999999944211 000 0011111111222222 22348889
Q ss_pred HhhccCCCCCCCCChHHHHHHHh
Q 011360 462 AYICTLHDPEERPNSQYVRCRLS 484 (487)
Q Consensus 462 i~~cl~~~P~~RPs~~~il~~L~ 484 (487)
+...|+.||++|||..-....|.
T Consensus 490 V~~lL~r~pskRvsp~iAANvl~ 512 (598)
T KOG4158|consen 490 VFDLLKRDPSKRVSPNIAANVLN 512 (598)
T ss_pred HHHHhcCCccccCCccHHHhHHH
Confidence 99999999999999876555543
No 424
>smart00090 RIO RIO-like kinase.
Probab=99.75 E-value=9.6e-18 Score=156.34 Aligned_cols=163 Identities=18% Similarity=0.138 Sum_probs=113.8
Q ss_pred hhhccccccccccccccceeEEEEEecCCCCceEEEEEeeecCchhH-HHHHH----H----hhhhhhHHHHHHHHHHHH
Q 011360 188 LKKEDCFASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIVYAPISA-AELIE----E----DSKLRDSKLRQIRSEIIT 258 (487)
Q Consensus 188 ~~~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~vavK~~~~~~~~~~-~~~~~----~----~~~~~~~~~~~~~~E~~~ 258 (487)
....-.|.+.+.||.|++|.||+|..+..+|..||+|++........ ..... . ...........+..|+.+
T Consensus 24 ~~~~~~~~i~~~Lg~G~~g~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~ 103 (237)
T smart00090 24 LNRGILSAIGGCISTGKEANVYHALDFDGSGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEKEFRN 103 (237)
T ss_pred HhcCchHHhCCeeccCcceeEEEEEecCCCCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHHHHHH
Confidence 33444588999999999999999963445899999999865332110 00000 0 000111122346789999
Q ss_pred hccCCCCC--ccccceEEecCCeeEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCC-eee
Q 011360 259 ASQIRHRN--ILPLLAHMVRPDCHLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSAS-IIH 335 (487)
Q Consensus 259 l~~l~hpn--Iv~l~~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~g-ivH 335 (487)
+.++.+.+ +.++++. ...++||||++|++|...... ...........++.|++.++.+| |+.| ++|
T Consensus 104 L~~L~~~~i~~p~~~~~----~~~~lV~E~~~g~~L~~~~~~----~~~~~~~~~~~i~~qi~~~l~~L---H~~g~iiH 172 (237)
T smart00090 104 LQRLYEAGVPVPKPIAW----RRNVLVMEFIGGDGLPAPRLK----DVEPEEEEEFELYDDILEEMRKL---YKEGELVH 172 (237)
T ss_pred HHHHHhcCCCCCeeeEe----cCceEEEEEecCCcccccccc----cCCcchHHHHHHHHHHHHHHHHH---HhcCCEEe
Confidence 99996533 3333332 235899999999888665421 23455666788999999999999 8888 999
Q ss_pred cCCCCCCEEeCCCCCEEEeccCCcccc
Q 011360 336 GDIKPRNVLLNDDMEACISDLGLAMAI 362 (487)
Q Consensus 336 ~Dlkp~Nill~~~~~~kl~DFg~s~~~ 362 (487)
|||||+||+++ ++.++|+|||.+...
T Consensus 173 ~Dikp~NIli~-~~~i~LiDFg~a~~~ 198 (237)
T smart00090 173 GDLSEYNILVH-DGKVVIIDVSQSVEL 198 (237)
T ss_pred CCCChhhEEEE-CCCEEEEEChhhhcc
Confidence 99999999999 889999999998654
No 425
>TIGR03724 arch_bud32 Kae1-associated kinase Bud32. Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.
Probab=99.74 E-value=1.3e-17 Score=152.05 Aligned_cols=139 Identities=21% Similarity=0.323 Sum_probs=108.1
Q ss_pred ccccccceeEEEEEecCCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCCCCccccceEEecCC
Q 011360 199 KIGSGGCGEVYKAELPGSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQIRHRNILPLLAHMVRPD 278 (487)
Q Consensus 199 ~lg~G~~g~v~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~ 278 (487)
.||+|+||.||+|.+ ++..+++|......... ..........++.+|+.++..+.|+++.....++...+
T Consensus 1 ~ig~G~~~~vy~~~~---~~~~~viK~~~~~~~~~-------~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~ 70 (199)
T TIGR03724 1 LIAKGAEAIIYLGDF---LGLKAVIKERVPKSYRH-------PELDERIRRERTRNEARLLSRARKAGVNTPVVYDVDPD 70 (199)
T ss_pred CCCCCceEEEEEeec---CCccEEEEEecCCcCcC-------chHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECC
Confidence 479999999999975 56789999863211000 00111223466788999999999888776666666777
Q ss_pred eeEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCCEEEeccCC
Q 011360 279 CHLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVLLNDDMEACISDLGL 358 (487)
Q Consensus 279 ~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nill~~~~~~kl~DFg~ 358 (487)
..++||||++|++|.+++... .. .++.+++.+|.+| |+.|++|||++|.||+++ ++.++++|||+
T Consensus 71 ~~~lv~e~~~g~~l~~~~~~~----~~-------~~~~~i~~~l~~l---H~~gi~H~Dl~~~Nil~~-~~~~~liDfg~ 135 (199)
T TIGR03724 71 NKTIVMEYIEGKPLKDVIEEG----ND-------ELLREIGRLVGKL---HKAGIVHGDLTTSNIIVR-DDKLYLIDFGL 135 (199)
T ss_pred CCEEEEEEECCccHHHHHhhc----HH-------HHHHHHHHHHHHH---HHCCeecCCCCcceEEEE-CCcEEEEECCC
Confidence 789999999999999887531 10 7899999999999 788999999999999999 78999999999
Q ss_pred cccc
Q 011360 359 AMAI 362 (487)
Q Consensus 359 s~~~ 362 (487)
+...
T Consensus 136 a~~~ 139 (199)
T TIGR03724 136 GKYS 139 (199)
T ss_pred CcCC
Confidence 8653
No 426
>PRK14879 serine/threonine protein kinase; Provisional
Probab=99.74 E-value=1.9e-17 Score=152.49 Aligned_cols=142 Identities=23% Similarity=0.317 Sum_probs=112.9
Q ss_pred cccccccceeEEEEEecCCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCCCCccccceEEecC
Q 011360 198 EKIGSGGCGEVYKAELPGSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQIRHRNILPLLAHMVRP 277 (487)
Q Consensus 198 ~~lg~G~~g~v~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~ 277 (487)
+.||+|++|.||+|.+ +|..+++|+......... ..........+.+|+.++..+.|++|.....++...
T Consensus 2 ~~l~~G~~~~vy~~~~---~~~~~~vK~~~~~~~~~~-------~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~ 71 (211)
T PRK14879 2 KLIKRGAEAEIYLGDF---LGIKAVIKWRIPKRYRHP-------ELDERIRRERTRREARIMSRARKAGVNVPAVYFVDP 71 (211)
T ss_pred cccccCceEEEEEEee---CCCceEEEEeCCcCCcCh-------HHHHHHHHHHHHHHHHHHHHHHHCCCCCCeEEEEeC
Confidence 5789999999999976 667899997632111000 011112335678899999999999998888887777
Q ss_pred CeeEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCCEEEeccC
Q 011360 278 DCHLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVLLNDDMEACISDLG 357 (487)
Q Consensus 278 ~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nill~~~~~~kl~DFg 357 (487)
+..+++|||++|++|.+++... .. ....++.+++.+|.++ |+.|++|||++|.||+++ ++.++|+|||
T Consensus 72 ~~~~lv~e~~~G~~L~~~~~~~-------~~-~~~~i~~~i~~~l~~l---H~~~i~H~Dl~p~Nil~~-~~~~~liDf~ 139 (211)
T PRK14879 72 ENFIIVMEYIEGEPLKDLINSN-------GM-EELELSREIGRLVGKL---HSAGIIHGDLTTSNMILS-GGKIYLIDFG 139 (211)
T ss_pred CCCEEEEEEeCCcCHHHHHHhc-------cH-HHHHHHHHHHHHHHHH---HhCCcccCCCCcccEEEE-CCCEEEEECC
Confidence 8889999999999999998641 11 7788999999999999 778899999999999999 7889999999
Q ss_pred Cccc
Q 011360 358 LAMA 361 (487)
Q Consensus 358 ~s~~ 361 (487)
.+..
T Consensus 140 ~a~~ 143 (211)
T PRK14879 140 LAEF 143 (211)
T ss_pred cccC
Confidence 8864
No 427
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=99.73 E-value=4.8e-18 Score=177.73 Aligned_cols=212 Identities=23% Similarity=0.297 Sum_probs=144.5
Q ss_pred ccccccccccccccceeEEEEEecCCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCCCCcccc
Q 011360 191 EDCFASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQIRHRNILPL 270 (487)
Q Consensus 191 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l 270 (487)
+++|..++.+-.|++|.||+.++. .+..++|+|+- . .. .+.+. ++..-..|.+
T Consensus 82 e~df~~IklisngAygavylvrh~-~trqrfa~kiN-k-------------q~-------lilRn--ilt~a~npfv--- 134 (1205)
T KOG0606|consen 82 ESDFNTIKLISNGAYGAVYLVRHK-ETRQRFAMKIN-K-------------QN-------LILRN--ILTFAGNPFV--- 134 (1205)
T ss_pred ccccceeEeeccCCCCceeeeecc-ccccchhhccc-c-------------cc-------hhhhc--cccccCCcce---
Confidence 346999999999999999999753 56778888531 0 00 00000 1111122322
Q ss_pred ceEEecCCeeEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCC
Q 011360 271 LAHMVRPDCHLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVLLNDDME 350 (487)
Q Consensus 271 ~~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nill~~~~~ 350 (487)
| |+-...+.. -++++.. .+.+++|| |+.||+|||+||+|.+|+.-|+
T Consensus 135 ------------v------gDc~tllk~----~g~lPvd--------mvla~Eyl---h~ygivhrdlkpdnllIT~mGh 181 (1205)
T KOG0606|consen 135 ------------V------GDCATLLKN----IGPLPVD--------MVLAVEYL---HSYGIVHRDLKPDNLLITSMGH 181 (1205)
T ss_pred ------------e------chhhhhccc----CCCCcch--------hhHHhHhh---ccCCeecCCCCCCcceeeeccc
Confidence 2 444444432 2344432 27789999 8999999999999999999999
Q ss_pred EEEeccCCccccCCCCc------------e-eeEeeecccccccCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCcccc
Q 011360 351 ACISDLGLAMAIPDGYT------------R-VLISYVLGTMAYIAPEYFQQPELSEKCDIFSFGMLLISLVRGVPSFVFH 417 (487)
Q Consensus 351 ~kl~DFg~s~~~~~~~~------------~-~~~~~~~gt~~y~aPE~l~~~~~~~~~DvwslG~~l~elltg~~pf~~~ 417 (487)
+|++|||+++....... . ......+|||.|.|||++....|+..+|+|++|+++||.+-|..||.+.
T Consensus 182 iKlTDfgLsk~GLms~atnl~eg~I~k~t~Ef~dKqvcgTPeyiaPeVilrqgygkpvdwwamGiIlyeFLVgcvpffGd 261 (1205)
T KOG0606|consen 182 IKLTDFGLSKKGLMSLATNLKEGHIEKDTHEFQDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGD 261 (1205)
T ss_pred ccccchhhhhhhhhhccchhhhcchHHHHHHhhhccccCCccccChhhhhhhccCCCccHHHHHHHHHHHheeeeeccCC
Confidence 99999999865321111 1 1123468999999999999999999999999999999999999999655
Q ss_pred CCCCccccHHHHHHHHhcCCCCCccCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCCh
Q 011360 418 QNGEEICSPEWLRKVMNSKNPSRAIDPRLPGNGYEKKMLHVLKIAYICTLHDPEERPNS 476 (487)
Q Consensus 418 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~ 476 (487)
++ .+.+..++.....-.--|+.+ ..++.+++.++|+.+|-.|--.
T Consensus 262 tp------eelfg~visd~i~wpE~dea~--------p~Ea~dli~~LL~qnp~~Rlgt 306 (1205)
T KOG0606|consen 262 TP------EELFGQVISDDIEWPEEDEAL--------PPEAQDLIEQLLRQNPLCRLGT 306 (1205)
T ss_pred CH------HHHHhhhhhhhccccccCcCC--------CHHHHHHHHHHHHhChHhhccc
Confidence 44 233444443222111113333 3568899999999999999643
No 428
>KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis]
Probab=99.73 E-value=1e-18 Score=171.19 Aligned_cols=173 Identities=25% Similarity=0.378 Sum_probs=127.4
Q ss_pred eeEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCCEEEeccCC
Q 011360 279 CHLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVLLNDDMEACISDLGL 358 (487)
Q Consensus 279 ~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nill~~~~~~kl~DFg~ 358 (487)
++||.|++|...+|.++|... ......++...+.++.|++.|+.| +|.+|+|+||.||+...+..+||+|||+
T Consensus 330 ~lyI~Mn~c~~~tledWl~rr-~~~e~~s~s~~~~~~~q~~~~~~y------k~~ihrdlkp~nif~~~d~q~kIgDFgl 402 (516)
T KOG1033|consen 330 YLYIQMNLCEKETLEDWLRRR-RTGEERSLSLMLDIFKQIAPAVEY------KGLIHRDLKPSNIFFSDDDQLKIGDFGL 402 (516)
T ss_pred chhhhhhhhhhhhHHHHhhCC-CcccccchhHHHHHHHhhccchhh------ccchhhhccccccccccchhhhhhhhhh
Confidence 578999999999999999632 345567788889999999999998 6799999999999999999999999999
Q ss_pred ccccCCCC----ceeeEeeecccccccCCcccCCCCCCchhHHHHHHHHHHHHHhC-CCCccccCCCCccccHHHHHHHH
Q 011360 359 AMAIPDGY----TRVLISYVLGTMAYIAPEYFQQPELSEKCDIFSFGMLLISLVRG-VPSFVFHQNGEEICSPEWLRKVM 433 (487)
Q Consensus 359 s~~~~~~~----~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DvwslG~~l~elltg-~~pf~~~~~~~~~~~~~~~~~~~ 433 (487)
........ .....+...||..||+||.+.+..|+.++||||||++++|+++- ..+|... ..+..+
T Consensus 403 ~ts~~~~~~~~~~~a~~t~~~gt~~YmsPEQi~g~~y~~kvdIyaLGlil~EL~~~f~T~~er~---------~t~~d~- 472 (516)
T KOG1033|consen 403 VTSQDKDETVAPAAASHTQQVGTLLYMSPEQIRGQQYSEKVDIYALGLILAELLIQFSTQFERI---------ATLTDI- 472 (516)
T ss_pred eeecccCCcccchhhhhhhcccccccCCHHHHhhhhhhhhcchhhHHHHHHHHHHHhccHHHHH---------Hhhhhh-
Confidence 87765443 11222456799999999999999999999999999999999983 3343100 001111
Q ss_pred hcCCCCCccCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCChH
Q 011360 434 NSKNPSRAIDPRLPGNGYEKKMLHVLKIAYICTLHDPEERPNSQ 477 (487)
Q Consensus 434 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~ 477 (487)
+.+ .+++....+ ++ +-..++.++++..|.+||++.
T Consensus 473 r~g----~ip~~~~~d----~p-~e~~ll~~lls~~p~~RP~~~ 507 (516)
T KOG1033|consen 473 RDG----IIPPEFLQD----YP-EEYTLLQQLLSPSPEERPSAI 507 (516)
T ss_pred hcC----CCChHHhhc----Cc-HHHHHHHHhcCCCcccCchHH
Confidence 111 111111111 11 234677889999999999443
No 429
>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated
Probab=99.71 E-value=4.8e-17 Score=170.35 Aligned_cols=142 Identities=23% Similarity=0.319 Sum_probs=110.9
Q ss_pred cccccccccccceeEEEEEecCCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCCCCccccceE
Q 011360 194 FASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQIRHRNILPLLAH 273 (487)
Q Consensus 194 ~~~~~~lg~G~~g~v~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~ 273 (487)
|...+.||+|+||.||+|.+. +..+++|+..... ..............+.+|+.++..++|++++..+.+
T Consensus 335 ~~~~~~iG~G~~g~Vy~~~~~---~~~~v~k~~~~~~-------~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~ 404 (535)
T PRK09605 335 KIPDHLIGKGAEADIKKGEYL---GRDAVIKERVPKG-------YRHPELDERLRTERTRAEARLLSEARRAGVPTPVIY 404 (535)
T ss_pred cCccceeccCCcEEEEEEeec---CccceeEEEeccc-------ccchhHHHHHHHHHHHHHHHHHHhhcccCCCeeEEE
Confidence 456789999999999999763 3445555432110 000011122234567899999999999999988887
Q ss_pred EecCCeeEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCCEEE
Q 011360 274 MVRPDCHLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVLLNDDMEACI 353 (487)
Q Consensus 274 ~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nill~~~~~~kl 353 (487)
+......++||||++|++|.+++. ....++.+++.+|.+| |+.|++||||||+||++ .++.++|
T Consensus 405 ~~~~~~~~lv~E~~~g~~L~~~l~------------~~~~~~~~i~~~L~~l---H~~giiHrDlkp~NILl-~~~~~~l 468 (535)
T PRK09605 405 DVDPEEKTIVMEYIGGKDLKDVLE------------GNPELVRKVGEIVAKL---HKAGIVHGDLTTSNFIV-RDDRLYL 468 (535)
T ss_pred EEeCCCCEEEEEecCCCcHHHHHH------------HHHHHHHHHHHHHHHH---HhCCCccCCCChHHEEE-ECCcEEE
Confidence 777778899999999999999874 2467899999999999 77899999999999999 6779999
Q ss_pred eccCCccc
Q 011360 354 SDLGLAMA 361 (487)
Q Consensus 354 ~DFg~s~~ 361 (487)
+|||+++.
T Consensus 469 iDFGla~~ 476 (535)
T PRK09605 469 IDFGLGKY 476 (535)
T ss_pred EeCccccc
Confidence 99999865
No 430
>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom
Probab=99.70 E-value=1.5e-16 Score=145.00 Aligned_cols=153 Identities=17% Similarity=0.176 Sum_probs=108.7
Q ss_pred ccccccccccccceeEEEEEecCCCCceEEEEEeeecCchhHH-----HHHHHh--hhhhhHHHHHHHHHHHHhccCCCC
Q 011360 193 CFASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIVYAPISAA-----ELIEED--SKLRDSKLRQIRSEIITASQIRHR 265 (487)
Q Consensus 193 ~~~~~~~lg~G~~g~v~~~~~~~~~~~~vavK~~~~~~~~~~~-----~~~~~~--~~~~~~~~~~~~~E~~~l~~l~hp 265 (487)
.|.+.+.||.|+||.||++... +|..||||++....+.... +..... .............|..++..+.|+
T Consensus 16 ~~~~~~~i~~G~~g~Vy~~~~~--~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~ 93 (198)
T cd05144 16 VESLGNQIGVGKESDVYLALDP--DGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAALKALYEE 93 (198)
T ss_pred hhhcCCccccCcceEEEEEEcC--CCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHHHHHHHc
Confidence 3777899999999999999753 7899999987653311100 000000 000011223467788888888777
Q ss_pred C--ccccceEEecCCeeEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCE
Q 011360 266 N--ILPLLAHMVRPDCHLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNV 343 (487)
Q Consensus 266 n--Iv~l~~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Ni 343 (487)
+ +...++ ....++||||++|++|...... .....++.+++.++.++ |..|++||||+|+||
T Consensus 94 ~i~v~~~~~----~~~~~lv~e~~~g~~L~~~~~~----------~~~~~~~~~i~~~l~~l---h~~gi~H~Dl~p~Ni 156 (198)
T cd05144 94 GFPVPKPID----WNRHAVVMEYIDGVELYRVRVL----------EDPEEVLDEILEEIVKA---YKHGIIHGDLSEFNI 156 (198)
T ss_pred CCCCCceee----cCCceEEEEEeCCcchhhcccc----------ccHHHHHHHHHHHHHHH---HHCCCCcCCCCcccE
Confidence 4 344433 2456899999999998765420 23567889999999999 668899999999999
Q ss_pred EeCCCCCEEEeccCCccccCC
Q 011360 344 LLNDDMEACISDLGLAMAIPD 364 (487)
Q Consensus 344 ll~~~~~~kl~DFg~s~~~~~ 364 (487)
++++++.++|+|||.+.....
T Consensus 157 ll~~~~~~~liDfg~~~~~~~ 177 (198)
T cd05144 157 LVDDDEKIYIIDWPQMVSTDH 177 (198)
T ss_pred EEcCCCcEEEEECCccccCCC
Confidence 999999999999999865543
No 431
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.67 E-value=5.1e-18 Score=177.22 Aligned_cols=258 Identities=20% Similarity=0.275 Sum_probs=191.7
Q ss_pred ccccccccccccceeEEEEEecCCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCC-CCCccccc
Q 011360 193 CFASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQIR-HRNILPLL 271 (487)
Q Consensus 193 ~~~~~~~lg~G~~g~v~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-hpnIv~l~ 271 (487)
.|.+.+.||.|+|+.+-.......+...+|.|.+.... .......+...|..+-..+. |+|++.++
T Consensus 21 ~~~~~~~ig~gs~~~~~~~~~~~~~~~~~a~~~~s~~~-------------~~~~~~~~i~~e~~~~~~~s~h~n~~~~~ 87 (601)
T KOG0590|consen 21 QYKLSRSIGKGSFSSSALASNSRDPESSSATKPISIPP-------------KSEDSSEHIDTETDIQKKLSKHSNTVHMI 87 (601)
T ss_pred cccccccccccccchhhhhhhcCCCcceeeccCCCCCC-------------CccchhhhcCccccccccccccccccccC
Confidence 47788889999999999886544556667777653321 12223445556777777776 99999999
Q ss_pred eEEecCCeeEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcC-CCCeeecCCCCCCEEeCCCC-
Q 011360 272 AHMVRPDCHLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYH-SASIIHGDIKPRNVLLNDDM- 349 (487)
Q Consensus 272 ~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h-~~givH~Dlkp~Nill~~~~- 349 (487)
+...+.+..++.++|..|+++.+.+.. ......+......++.|+..++.|+ | ..++.|+|+||+|.+++..+
T Consensus 88 ~~~~~~~~~~~~~~~s~g~~~f~~i~~--~~~~~~~~~~~~~~~~ql~s~l~~~---H~~~~~~h~~ikP~n~~l~~s~~ 162 (601)
T KOG0590|consen 88 EPSSSPRSYLLSLSYSDGGSLFSKISH--PDSTGTSSSSASRYLPQLNSGLSYL---HPENGVTHRDIKPSNSLLDESGS 162 (601)
T ss_pred CccCCCcccccccCccccccccccccc--CCccCCCCcchhhhhhhhccCcccc---CcccccccCCCCCccchhccCCC
Confidence 999999999999999999999887731 1222556667788999999999999 7 88999999999999999999
Q ss_pred CEEEeccCCccccCC-CCceeeEeeecc-cccccCCcccCCC-CCCchhHHHHHHHHHHHHHhCCCCccccCCCCccccH
Q 011360 350 EACISDLGLAMAIPD-GYTRVLISYVLG-TMAYIAPEYFQQP-ELSEKCDIFSFGMLLISLVRGVPSFVFHQNGEEICSP 426 (487)
Q Consensus 350 ~~kl~DFg~s~~~~~-~~~~~~~~~~~g-t~~y~aPE~l~~~-~~~~~~DvwslG~~l~elltg~~pf~~~~~~~~~~~~ 426 (487)
..+++|||++..... ..........+| ++.|+|||...+. ......|+||.|+++.-+++|..|+......... ..
T Consensus 163 ~l~~~df~~At~~~~~~g~~~~~~~~~g~s~~y~a~E~~~~~~~~~~~~d~~S~g~~l~~~~~g~~p~~~~~~~~~~-~~ 241 (601)
T KOG0590|consen 163 ALKIADFGLATAYRNKNGAERSLKDRCGSSPPYGAPEHLSGKAYRGPSVDVWSLGIVLSAMLTGELPWDFPSRKDGR-YS 241 (601)
T ss_pred cccCCCchhhccccccCCcceeeecccCCCCCCCCcccccchhhcCCCcccccccccccccccCCCCcccccccccc-ce
Confidence 999999999998877 555555566778 9999999999885 4467789999999999999999999655432211 11
Q ss_pred HHHHHHHhcCCCCCccCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCChHHHH
Q 011360 427 EWLRKVMNSKNPSRAIDPRLPGNGYEKKMLHVLKIAYICTLHDPEERPNSQYVR 480 (487)
Q Consensus 427 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~~il 480 (487)
.|...- ...... ..........+++..++..+|+.|.+.+++.
T Consensus 242 ~~~~~~---~~~~~~--------~~~~~~~~~~~~l~k~l~~~~~~r~s~~~~~ 284 (601)
T KOG0590|consen 242 SWKSNK---GRFTQL--------PWNSISDQAHDLLHKILKENPSNRLSIEELK 284 (601)
T ss_pred eecccc---cccccC--------ccccCChhhhhcccccccCCchhcccccccc
Confidence 111100 010011 1111223466788889989999999988764
No 432
>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed
Probab=99.64 E-value=2e-15 Score=141.06 Aligned_cols=147 Identities=15% Similarity=0.172 Sum_probs=106.1
Q ss_pred cccc-cccceeEEEEEecCCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCCCCc--cccceEE
Q 011360 198 EKIG-SGGCGEVYKAELPGSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQIRHRNI--LPLLAHM 274 (487)
Q Consensus 198 ~~lg-~G~~g~v~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnI--v~l~~~~ 274 (487)
..|| .||.|+||.+.. .+..++||.+..... ..++..............+.+|+.++..+.|++| +..+++.
T Consensus 37 ~~lg~~~g~gtv~~v~~---~~~~~vlk~~~r~~~--i~kv~~~~~~~~~~~~~r~~rE~~ll~~L~~~gi~vP~pl~~~ 111 (239)
T PRK01723 37 RVVGSAKGRGTTWFVQT---PGVNWVLRHYRRGGL--IGKLSKDRYLFTGLERTRAFAEFRLLAQLYEAGLPVPRPIAAR 111 (239)
T ss_pred ceeecCCCCccEEEEEe---CCceEEEEEeeEcch--HHhhhhhcccccchhhhHHHHHHHHHHHHHhCCCCCceeEeee
Confidence 5687 889999998865 477899998854221 1122211111122344677889999999988875 6666654
Q ss_pred ecCCe----eEEEEEecCC-CCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCC
Q 011360 275 VRPDC----HLLVYEFMKN-GSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVLLNDDM 349 (487)
Q Consensus 275 ~~~~~----~~lv~E~~~~-gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nill~~~~ 349 (487)
..... .++|||+++| .+|.+++.. ..++.. .+.+++.+|.+| |++||+||||||.|||++.++
T Consensus 112 ~~~~~~~~~~~lV~e~l~G~~~L~~~l~~-----~~l~~~----~~~~i~~~l~~l---H~~GI~HrDlkp~NILv~~~~ 179 (239)
T PRK01723 112 VVRHGLFYRADILIERIEGARDLVALLQE-----APLSEE----QWQAIGQLIARF---HDAGVYHADLNAHNILLDPDG 179 (239)
T ss_pred eeecCcceeeeEEEEecCCCCCHHHHHhc-----CCCCHH----HHHHHHHHHHHH---HHCCCCCCCCCchhEEEcCCC
Confidence 43222 2599999997 689888753 234433 357899999999 888999999999999999999
Q ss_pred CEEEeccCCccc
Q 011360 350 EACISDLGLAMA 361 (487)
Q Consensus 350 ~~kl~DFg~s~~ 361 (487)
.++|+|||.+..
T Consensus 180 ~v~LIDfg~~~~ 191 (239)
T PRK01723 180 KFWLIDFDRGEL 191 (239)
T ss_pred CEEEEECCCccc
Confidence 999999998864
No 433
>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family. The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves
Probab=99.61 E-value=4e-15 Score=128.81 Aligned_cols=135 Identities=20% Similarity=0.208 Sum_probs=109.3
Q ss_pred cccccccccceeEEEEEecCCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCC--CCccccceE
Q 011360 196 SLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQIRH--RNILPLLAH 273 (487)
Q Consensus 196 ~~~~lg~G~~g~v~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h--pnIv~l~~~ 273 (487)
+.+.+|.|.++.||++... +..+++|..... .. ...+..|+..+..+.| +++.+++.+
T Consensus 2 ~~~~i~~g~~~~v~~~~~~---~~~~~iK~~~~~--------------~~---~~~~~~e~~~~~~l~~~~~~~p~~~~~ 61 (155)
T cd05120 2 SIKLLKGGLTNRVYLLGTK---DEDYVLKINPSR--------------EK---GADREREVAILQLLARKGLPVPKVLAS 61 (155)
T ss_pred cceecccccccceEEEEec---CCeEEEEecCCC--------------Cc---hhHHHHHHHHHHHHHHcCCCCCeEEEE
Confidence 3567999999999999863 468999976321 00 3457778888888866 588899888
Q ss_pred EecCCeeEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCCEEE
Q 011360 274 MVRPDCHLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVLLNDDMEACI 353 (487)
Q Consensus 274 ~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nill~~~~~~kl 353 (487)
....+..+++|||++++++..+ +......++.+++.+++++|..+..+++|+|++|+||++++++.+++
T Consensus 62 ~~~~~~~~~v~e~~~g~~~~~~-----------~~~~~~~~~~~~~~~l~~lh~~~~~~i~H~Dl~~~Nil~~~~~~~~l 130 (155)
T cd05120 62 GESDGWSYLLMEWIEGETLDEV-----------SEEEKEDIAEQLAELLAKLHQLPLLVLCHGDLHPGNILVDDGKILGI 130 (155)
T ss_pred cCCCCccEEEEEecCCeecccC-----------CHHHHHHHHHHHHHHHHHHhCCCceEEEecCCCcceEEEECCcEEEE
Confidence 8877889999999988776543 44566778999999999998766678999999999999999899999
Q ss_pred eccCCccc
Q 011360 354 SDLGLAMA 361 (487)
Q Consensus 354 ~DFg~s~~ 361 (487)
.|||.+..
T Consensus 131 ~Df~~~~~ 138 (155)
T cd05120 131 IDWEYAGY 138 (155)
T ss_pred EecccccC
Confidence 99998864
No 434
>cd05119 RIO RIO kinase family, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct
Probab=99.59 E-value=8.5e-15 Score=132.10 Aligned_cols=152 Identities=22% Similarity=0.222 Sum_probs=97.0
Q ss_pred ccccccccceeEEEEEecCCCCceEEEEEeeecCchhHHHH--H-----HHhhh--hhhHHHHHHHHHHHHhccCCCCC-
Q 011360 197 LEKIGSGGCGEVYKAELPGSNGKMIAIKKVIVYAPISAAEL--I-----EEDSK--LRDSKLRQIRSEIITASQIRHRN- 266 (487)
Q Consensus 197 ~~~lg~G~~g~v~~~~~~~~~~~~vavK~~~~~~~~~~~~~--~-----~~~~~--~~~~~~~~~~~E~~~l~~l~hpn- 266 (487)
.+.||.|+||.||+|... ++..||||++........... . ..... ...........|...+..+.+.+
T Consensus 2 ~~~lg~G~~g~Vy~a~~~--~~~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~ 79 (187)
T cd05119 2 GGPIGTGKEADVYLALDG--DGEPVAVKIYRTGRTSFKKRKRYRTGDYRFGRKKSNWRYLSRLWAEKEFRNLKRLYEAGV 79 (187)
T ss_pred CcccccccceeEEEEECC--CCCEEEEEEEecCccchhhhhhhhHHHHHhccCCcchhhhhhHHHHHHHHHHHHHHHcCC
Confidence 467999999999999753 789999998854322111100 0 00000 00001111234555555554432
Q ss_pred -ccccceEEecCCeeEEEEEecCCCCHHH-HHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCC-CCeeecCCCCCCE
Q 011360 267 -ILPLLAHMVRPDCHLLVYEFMKNGSLQD-ILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHS-ASIIHGDIKPRNV 343 (487)
Q Consensus 267 -Iv~l~~~~~~~~~~~lv~E~~~~gsL~~-~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~-~givH~Dlkp~Ni 343 (487)
+.+.+++ ...++||||++++++.. .+.... .. .....++.+++.++.++ |. .||+|+||||+||
T Consensus 80 ~~~~~~~~----~~~~lv~e~~~g~~~~~~~l~~~~-----~~-~~~~~~~~~~~~~l~~l---h~~~~ivH~Dl~p~Ni 146 (187)
T cd05119 80 PVPKPIDL----NRHVLVMEFIGGDGIPAPRLKDVR-----LL-EDPEELYDQILELMRKL---YREAGLVHGDLSEYNI 146 (187)
T ss_pred CCCceEec----CCCEEEEEEeCCCCccChhhhhhh-----hc-ccHHHHHHHHHHHHHHH---hhccCcCcCCCChhhE
Confidence 3444432 24589999999854321 122110 11 56778999999999999 55 8899999999999
Q ss_pred EeCCCCCEEEeccCCccccCC
Q 011360 344 LLNDDMEACISDLGLAMAIPD 364 (487)
Q Consensus 344 ll~~~~~~kl~DFg~s~~~~~ 364 (487)
+++ ++.++|+|||.+.....
T Consensus 147 li~-~~~~~liDfg~a~~~~~ 166 (187)
T cd05119 147 LVD-DGKVYIIDVPQAVEIDH 166 (187)
T ss_pred EEE-CCcEEEEECcccccccC
Confidence 999 88999999999865433
No 435
>KOG1266 consensus Protein kinase [Signal transduction mechanisms]
Probab=99.56 E-value=8.6e-15 Score=135.33 Aligned_cols=205 Identities=18% Similarity=0.261 Sum_probs=143.5
Q ss_pred HHhccCCCCCccccceEEecCC-----eeEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCC
Q 011360 257 ITASQIRHRNILPLLAHMVRPD-----CHLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSA 331 (487)
Q Consensus 257 ~~l~~l~hpnIv~l~~~~~~~~-----~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~ 331 (487)
..+-++.|.|||++..+|.+.. ...+++||+..|+|..+|+....++..+....-.+|+.||..||.|||.+ +.
T Consensus 119 dnllqlvHsnlvkfH~yw~d~K~~e~~rviFiteymssgs~~~fLkrt~~~~~a~~~~~wkkw~tqIlsal~yLhs~-~P 197 (458)
T KOG1266|consen 119 DNLLQLVHSNLVKFHKYWTDKKYEEKPRVIFITEYMSSGSLKQFLKRTKKNQKALFQKAWKKWCTQILSALSYLHSC-DP 197 (458)
T ss_pred HHHHHHHHHHHHHHHHhhcccccccccceEEEEecccchhHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhhcc-CC
Confidence 3455668999999999987643 46789999999999999998888888899999999999999999999886 45
Q ss_pred CeeecCCCCCCEEeCCCCCEEEeccCCccccCC--CCceeeEeeecccccccCCcccCCCCCCchhHHHHHHHHHHHHHh
Q 011360 332 SIIHGDIKPRNVLLNDDMEACISDLGLAMAIPD--GYTRVLISYVLGTMAYIAPEYFQQPELSEKCDIFSFGMLLISLVR 409 (487)
Q Consensus 332 givH~Dlkp~Nill~~~~~~kl~DFg~s~~~~~--~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DvwslG~~l~ellt 409 (487)
-|+|+++..+.|++..+|-+|++--.-...... .......+...+-++|.|||.=.....+.++|||+||++..+|.-
T Consensus 198 piihgnlTc~tifiq~ngLIkig~~ap~s~h~s~~~~~~~Ek~~~~~~~g~~a~~sg~~tn~~~a~dIy~fgmcAlemai 277 (458)
T KOG1266|consen 198 PIIHGNLTCDTIFIQHNGLIKIGSVAPDSTHPSVNSTREAEKSVNTSLPGFSAPESGTTTNTTGASDIYKFGMCALEMAI 277 (458)
T ss_pred ccccCCcchhheeecCCceEEecccCccccchhhhhhhHhhhhccccCCccccCCcCcccccccchhhhhhhHHHHHHHH
Confidence 599999999999999999888842111110000 000001122346789999998777777889999999999999998
Q ss_pred CCCCccccCCCCccccHHHHHHHHhcCCCCCccCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCChHHHHH
Q 011360 410 GVPSFVFHQNGEEICSPEWLRKVMNSKNPSRAIDPRLPGNGYEKKMLHVLKIAYICTLHDPEERPNSQYVRC 481 (487)
Q Consensus 410 g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~~il~ 481 (487)
+..--..... .....+...... ..+...+ =...+..|+...|+.||++.+++-
T Consensus 278 lEiq~tnseS--~~~~ee~ia~~i------~~len~l-----------qr~~i~kcl~~eP~~rp~ar~llf 330 (458)
T KOG1266|consen 278 LEIQSTNSES--KVEVEENIANVI------IGLENGL-----------QRGSITKCLEGEPNGRPDARLLLF 330 (458)
T ss_pred heeccCCCcc--eeehhhhhhhhe------eeccCcc-----------ccCcCcccccCCCCCCcchhhhhc
Confidence 8543211110 000001111111 1111111 124567899999999999998763
No 436
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.44 E-value=1.1e-13 Score=138.54 Aligned_cols=253 Identities=21% Similarity=0.220 Sum_probs=179.8
Q ss_pred ccccccccccc--ccceeEEEEEe-cCCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccC-CCCCc
Q 011360 192 DCFASLEKIGS--GGCGEVYKAEL-PGSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQI-RHRNI 267 (487)
Q Consensus 192 ~~~~~~~~lg~--G~~g~v~~~~~-~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpnI 267 (487)
..+.+...+|. |.+|.+|.+.. ...++..+|+|+-....- .+.....-.+|+.....+ .|+|.
T Consensus 114 ~~~~~~~~~g~~~g~~~s~~~~~~~~~~s~~~~a~k~s~~p~s-------------~p~~~~~k~~~~~s~~~i~~~~~~ 180 (524)
T KOG0601|consen 114 QRFPISSRTGSLPGSKGSVFKSRCTNSESPHKFAVKKSKIPFS-------------PPLDSKRKLREFLSHHKIDSHENP 180 (524)
T ss_pred hhcccccccccCCCCCceeecccCCcccCCcccccccccCCCC-------------CccccccccchhhcccccCccccc
Confidence 35678889999 99999999975 245778899987422110 001111223455555555 69999
Q ss_pred cccceEEecCCeeEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHH----HHHHHHhcCCCCeeecCCCCCCE
Q 011360 268 LPLLAHMVRPDCHLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVAS----GLEYLHMYHSASIIHGDIKPRNV 343 (487)
Q Consensus 268 v~l~~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~----~L~~Lh~~h~~givH~Dlkp~Ni 343 (487)
++.+..+...+..|+-+|+| +.+|..+... ....++....+....+..+ ||.++ |+.+++|-|+||.||
T Consensus 181 v~~~~~~e~~~~lfiqtE~~-~~sl~~~~~~---~~~~~p~~~l~~~~~~~~~~~~~al~~~---hs~~~~~~~~kp~~i 253 (524)
T KOG0601|consen 181 VRDSPAWEGSGILFIQTELC-GESLQSYCHT---PCNFLPDNLLWNSLRDWLSRDVTALSHL---HSNNIVHDDLKPANI 253 (524)
T ss_pred cccCcccccCCcceeeeccc-cchhHHhhhc---ccccCCchhhhhHHhhhhhccccccccc---CCCcccccccchhhe
Confidence 99999999999999999999 5688777653 2344777788888888888 99999 888899999999999
Q ss_pred EeCCC-CCEEEeccCCccccCCCCceee---EeeecccccccCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCccccCC
Q 011360 344 LLNDD-MEACISDLGLAMAIPDGYTRVL---ISYVLGTMAYIAPEYFQQPELSEKCDIFSFGMLLISLVRGVPSFVFHQN 419 (487)
Q Consensus 344 ll~~~-~~~kl~DFg~s~~~~~~~~~~~---~~~~~gt~~y~aPE~l~~~~~~~~~DvwslG~~l~elltg~~pf~~~~~ 419 (487)
++..+ ...+++|||+...+........ .....|...|++||.+.+ .++...|+|++|.+..+..++..+....-+
T Consensus 254 ~~~~~~~s~~~~df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~-l~~~~~di~sl~ev~l~~~l~~~~~~~g~~ 332 (524)
T KOG0601|consen 254 FTTSDWTSCKLTDFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNG-LATFASDIFSLGEVILEAILGSHLPSVGKN 332 (524)
T ss_pred ecccccceeecCCcceeEEccCCccccceeeeecCCCCceEeChhhhcc-ccchHhhhcchhhhhHhhHhhcccccCCCC
Confidence 99999 8899999999988766542211 122257889999998876 678999999999999999999766643321
Q ss_pred CCccccHHHHHHHHhcCCCCCccCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCChHHHHH
Q 011360 420 GEEICSPEWLRKVMNSKNPSRAIDPRLPGNGYEKKMLHVLKIAYICTLHDPEERPNSQYVRC 481 (487)
Q Consensus 420 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~~il~ 481 (487)
.... ..+... ++.+........+...+..+++.+|-.|++.+.+..
T Consensus 333 ~~W~-----------~~r~~~-----ip~e~~~~~s~~l~~~~~~~~d~~~~~~~~~q~~~~ 378 (524)
T KOG0601|consen 333 SSWS-----------QLRQGY-----IPLEFCEGGSSSLRSVTSQMLDEDPRLRLTAQILTA 378 (524)
T ss_pred CCcc-----------cccccc-----CchhhhcCcchhhhhHHHHhcCcchhhhhHHHHHhc
Confidence 1111 001000 111111112234555888899999999999987653
No 437
>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase. This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.
Probab=99.44 E-value=1.2e-12 Score=133.01 Aligned_cols=156 Identities=20% Similarity=0.250 Sum_probs=98.5
Q ss_pred cccccccceeEEEEEecCCCCceEEEEEeeecCchhHH---HHHHHh----------------hhhhhHHH------HHH
Q 011360 198 EKIGSGGCGEVYKAELPGSNGKMIAIKKVIVYAPISAA---ELIEED----------------SKLRDSKL------RQI 252 (487)
Q Consensus 198 ~~lg~G~~g~v~~~~~~~~~~~~vavK~~~~~~~~~~~---~~~~~~----------------~~~~~~~~------~~~ 252 (487)
+.||.|++|.||+|++. +|+.||||+.......... +.+..- ...-.... -.+
T Consensus 123 ~plasaSigQVh~A~l~--~G~~VaVKv~rp~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eldf 200 (437)
T TIGR01982 123 KPLAAASIAQVHRARLV--DGKEVAVKVLRPGIEKTIAADIALLYRLARIVERLSPDSRRLRPTEVVKEFEKTLRRELDL 200 (437)
T ss_pred cceeeeehhheEEEEec--CCCEEEEEeeCCCcHHHHHHHHHHHHHHHHHHHHhCccccccCHHHHHHHHHHHHHHHHCH
Confidence 57999999999999874 7899999998543211111 000000 00000011 124
Q ss_pred HHHHHHhccC----C-CCCccccceEEecCCeeEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHH-HHHHHH
Q 011360 253 RSEIITASQI----R-HRNILPLLAHMVRPDCHLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVAS-GLEYLH 326 (487)
Q Consensus 253 ~~E~~~l~~l----~-hpnIv~l~~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~-~L~~Lh 326 (487)
.+|+..+.++ + +|+|.-..-+.......++||||++|++|.++..... ... ....++..++. .+..+
T Consensus 201 ~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~~~~~~~~---~~~---~~~~ia~~~~~~~l~ql- 273 (437)
T TIGR01982 201 RREAANASELGENFKNDPGVYVPEVYWDRTSERVLTMEWIDGIPLSDIAALDE---AGL---DRKALAENLARSFLNQV- 273 (437)
T ss_pred HHHHHHHHHHHHhcCCCCCEEeCCEehhhcCCceEEEEeECCcccccHHHHHh---cCC---CHHHHHHHHHHHHHHHH-
Confidence 5566665555 2 3443322222233445689999999999988765311 111 23445555554 34455
Q ss_pred hcCCCCeeecCCCCCCEEeCCCCCEEEeccCCccccCC
Q 011360 327 MYHSASIIHGDIKPRNVLLNDDMEACISDLGLAMAIPD 364 (487)
Q Consensus 327 ~~h~~givH~Dlkp~Nill~~~~~~kl~DFg~s~~~~~ 364 (487)
|..|++|+|++|.||+++.++.++++|||++..+..
T Consensus 274 --~~~g~~H~D~hPgNilv~~~g~i~liDfG~~~~l~~ 309 (437)
T TIGR01982 274 --LRDGFFHADLHPGNIFVLKDGKIIALDFGIVGRLSE 309 (437)
T ss_pred --HhCCceeCCCCcccEEECCCCcEEEEeCCCeeECCH
Confidence 788999999999999999999999999999977653
No 438
>KOG1243 consensus Protein kinase [General function prediction only]
Probab=99.40 E-value=1.1e-11 Score=125.65 Aligned_cols=166 Identities=17% Similarity=0.235 Sum_probs=124.0
Q ss_pred CCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCCCCccccceEEecCCeeEEEEEecCCCCHHH
Q 011360 215 GSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQIRHRNILPLLAHMVRPDCHLLVYEFMKNGSLQD 294 (487)
Q Consensus 215 ~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~E~~~~gsL~~ 294 (487)
+.++.+|.|...... .........+.+..++.++||||++++..+...+..|+|+|-+ ..|..
T Consensus 34 k~~~~~vsVF~~~~~---------------~~~~~~~~~~A~k~lKtlRHP~Il~yL~t~e~~~~~ylvTErV--~Pl~~ 96 (690)
T KOG1243|consen 34 KADGGPVSVFVYKRS---------------NGEVTELAKRAVKRLKTLRHPNILSYLDTTEEEGTLYLVTERV--RPLET 96 (690)
T ss_pred eccCCceEEEEEeCC---------------CchhhHHHHHHHHHhhhccCchhhhhhhhhcccCceEEEeecc--ccHHH
Confidence 346777777766321 1133455667788899999999999999999999999999987 47888
Q ss_pred HHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCCEEEeccCCccccCCCCceeeEeee
Q 011360 295 ILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVLLNDDMEACISDLGLAMAIPDGYTRVLISYV 374 (487)
Q Consensus 295 ~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nill~~~~~~kl~DFg~s~~~~~~~~~~~~~~~ 374 (487)
+++.. ....+...+.||+.||.||| ++.+++|++|.-+.|+++..|..||++|-++......... ....
T Consensus 97 ~lk~l-------~~~~v~~Gl~qIl~AL~FL~--~d~~lvHgNv~~~SVfVn~~GeWkLggle~v~~~~~~~~~--~~~~ 165 (690)
T KOG1243|consen 97 VLKEL-------GKEEVCLGLFQILAALSFLN--DDCNLVHGNVCKDSVFVNESGEWKLGGLELVSKASGFNAP--AKSL 165 (690)
T ss_pred HHHHh-------HHHHHHHHHHHHHHHHHHHh--ccCCeeeccEeeeeEEEcCCCcEEEeeeEEEeccccCCcc--cccc
Confidence 88752 24566778999999999997 6788999999999999999999999999887654332210 0111
Q ss_pred cccccccCCcccCCCCCCchhHHHHHHHHHHHHHhC
Q 011360 375 LGTMAYIAPEYFQQPELSEKCDIFSFGMLLISLVRG 410 (487)
Q Consensus 375 ~gt~~y~aPE~l~~~~~~~~~DvwslG~~l~elltg 410 (487)
.--..|..|+.+.... ...|.|-|||++++++.|
T Consensus 166 ~~~~s~~~P~~~~~s~--~s~D~~~Lg~li~el~ng 199 (690)
T KOG1243|consen 166 YLIESFDDPEEIDPSE--WSIDSWGLGCLIEELFNG 199 (690)
T ss_pred hhhhcccChhhcCccc--cchhhhhHHHHHHHHhCc
Confidence 1122456666543322 457999999999999999
No 439
>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed
Probab=99.34 E-value=6.6e-12 Score=129.00 Aligned_cols=162 Identities=17% Similarity=0.172 Sum_probs=93.4
Q ss_pred cccccccccccceeEEEEEecCCCCceEEEEEeeecCchhH---HHHHH-------Hh---------hhhhhHHHHH---
Q 011360 194 FASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIVYAPISA---AELIE-------ED---------SKLRDSKLRQ--- 251 (487)
Q Consensus 194 ~~~~~~lg~G~~g~v~~~~~~~~~~~~vavK~~~~~~~~~~---~~~~~-------~~---------~~~~~~~~~~--- 251 (487)
|.. +.||.|++|.||+|+++ .+|+.||||+......... .+.+. .. ...-.+..+.
T Consensus 122 fd~-~PlasaSiaQVh~A~l~-~~G~~VAVKV~rP~i~~~I~~Dl~~l~~~a~~l~~~~~~~~~l~~~~~v~e~~~~l~~ 199 (537)
T PRK04750 122 FDI-KPLASASIAQVHFARLK-DNGREVVVKVLRPDILPVIDADLALMYRLARWVERLLPDGRRLKPREVVAEFEKTLHD 199 (537)
T ss_pred cCh-hhhcCCCccEEEEEEEC-CCCCEEEEEEeCcchHHHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHHHHHH
Confidence 555 68999999999999875 3599999999864321110 00000 00 0000111222
Q ss_pred ---HHHHHHHhccC----CCCCccccceEEec-CCeeEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHH
Q 011360 252 ---IRSEIITASQI----RHRNILPLLAHMVR-PDCHLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLE 323 (487)
Q Consensus 252 ---~~~E~~~l~~l----~hpnIv~l~~~~~~-~~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~ 323 (487)
+.+|+..+.++ .+.+.+.+-.++.+ ....++||||++|+++.++-.- .. ...+. ..++...+. .
T Consensus 200 ElD~~~Ea~N~~~~~~~f~~~~~v~VP~v~~d~st~~VLvmE~i~G~~l~d~~~l-~~--~g~d~---~~la~~~v~--~ 271 (537)
T PRK04750 200 ELDLMREAANASQLRRNFEDSDMLYVPEVYWDYCSETVMVMERMYGIPVSDVAAL-RA--AGTDM---KLLAERGVE--V 271 (537)
T ss_pred hhCHHHHHHHHHHHHHHccCCCCeecceeecccCCCceEEEeeecCccHHhHHHH-Hh--cCCCH---HHHHHHHHH--H
Confidence 33444444433 23333333333322 4456799999999999875321 11 11111 112222221 1
Q ss_pred HHHhcCCCCeeecCCCCCCEEeCCCC----CEEEeccCCccccCCC
Q 011360 324 YLHMYHSASIIHGDIKPRNVLLNDDM----EACISDLGLAMAIPDG 365 (487)
Q Consensus 324 ~Lh~~h~~givH~Dlkp~Nill~~~~----~~kl~DFg~s~~~~~~ 365 (487)
|+.+....|++|+|++|.||+++.+| .++++|||++..++..
T Consensus 272 ~~~Qif~~GffHaDpHPGNIlv~~~g~~~~~i~llDFGivg~l~~~ 317 (537)
T PRK04750 272 FFTQVFRDGFFHADMHPGNIFVSYDPPENPRYIALDFGIVGSLNKE 317 (537)
T ss_pred HHHHHHhCCeeeCCCChHHeEEecCCCCCCeEEEEecceEEECCHH
Confidence 22333567899999999999999888 8999999999776543
No 440
>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.
Probab=99.30 E-value=2.8e-11 Score=108.23 Aligned_cols=154 Identities=17% Similarity=0.181 Sum_probs=100.1
Q ss_pred cccccccceeEEEEEecCC-----CCceEEEEEeeecCc-hhHHHH-HHHhhh-----hhhHHHH----HHHHHHHHhcc
Q 011360 198 EKIGSGGCGEVYKAELPGS-----NGKMIAIKKVIVYAP-ISAAEL-IEEDSK-----LRDSKLR----QIRSEIITASQ 261 (487)
Q Consensus 198 ~~lg~G~~g~v~~~~~~~~-----~~~~vavK~~~~~~~-~~~~~~-~~~~~~-----~~~~~~~----~~~~E~~~l~~ 261 (487)
..||.|--+.||.|.-... .+..+|||+...... ....+. +..+.. .+..... -..+|+..|.+
T Consensus 3 g~i~~GKEa~V~~~~~~~~~~~~~~~~~~avKi~r~~~~~Fk~~~~y~~~~~rf~~~~~k~~~~~~~~~wa~kE~r~L~r 82 (197)
T cd05146 3 GCISTGKESVVLHANGGSNETEQVIPTECAIKVFKTTLNEFKNRDKYIKDDYRFKDRFSKLNPRKIIRMWAEKEMHNLKR 82 (197)
T ss_pred CccccCcceEEEEEecCcccccccCCceEEEEEEeccceeEcChhhhccCCcccccCcCCCCHHHHHHHHHHHHHHHHHH
Confidence 5789999999999963211 357899998865331 111111 111100 0111222 23489999988
Q ss_pred CCC--CCccccceEEecCCeeEEEEEecCCCCHHH-HHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCC
Q 011360 262 IRH--RNILPLLAHMVRPDCHLLVYEFMKNGSLQD-ILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDI 338 (487)
Q Consensus 262 l~h--pnIv~l~~~~~~~~~~~lv~E~~~~gsL~~-~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dl 338 (487)
+.. -++..++++ ...++||||+.+..+.. .+.. ..++......+..+++.+|..++ |..|+|||||
T Consensus 83 l~~~Gv~vP~pi~~----~~~~lvME~Ig~~~~~~~~Lkd-----~~~~~~~~~~i~~~i~~~l~~l~--H~~glVHGDL 151 (197)
T cd05146 83 MQKAGIPCPEVVVL----KKHVLVMSFIGDDQVPAPKLKD-----AKLNDEEMKNAYYQVLSMMKQLY--KECNLVHADL 151 (197)
T ss_pred HHHcCCCCCeEEEe----cCCEEEEEEcCCCCccchhhhc-----cccCHHHHHHHHHHHHHHHHHHH--HhCCeecCCC
Confidence 843 345555543 45679999996643321 2221 23444556677889999999885 6778999999
Q ss_pred CCCCEEeCCCCCEEEeccCCccccC
Q 011360 339 KPRNVLLNDDMEACISDLGLAMAIP 363 (487)
Q Consensus 339 kp~Nill~~~~~~kl~DFg~s~~~~ 363 (487)
++.||++. ++.+.|+|||.+....
T Consensus 152 s~~NIL~~-~~~v~iIDF~qav~~~ 175 (197)
T cd05146 152 SEYNMLWH-DGKVWFIDVSQSVEPT 175 (197)
T ss_pred CHHHEEEE-CCcEEEEECCCceeCC
Confidence 99999997 4689999999887654
No 441
>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.29 E-value=3.3e-11 Score=104.03 Aligned_cols=139 Identities=22% Similarity=0.329 Sum_probs=103.2
Q ss_pred cccccccceeEEEEEecCCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCCCCccccceEEecC
Q 011360 198 EKIGSGGCGEVYKAELPGSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQIRHRNILPLLAHMVRP 277 (487)
Q Consensus 198 ~~lg~G~~g~v~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~ 277 (487)
..+++|+-+.++.+.+ -|.++++|.= .. +.+........-...+..+|+.++++++--.|...+-+..++
T Consensus 2 ~~i~~GAEa~i~~~~~---~g~~av~K~R-i~------K~YR~p~LD~klrr~Rt~~Earil~~a~~~GV~~P~v~dvD~ 71 (204)
T COG3642 2 DLIKQGAEAIIYLTDF---LGLPAVVKER-IP------KRYRHPELDEKLRRERTRREARILAKAREAGVPVPIVYDVDP 71 (204)
T ss_pred chhhCCcceeEEeeec---cCcceEEEee-cC------cccCChHHHHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEEcC
Confidence 3578899999999976 3445566642 11 112222223333456678899999998777777777778888
Q ss_pred CeeEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCCEEEeccC
Q 011360 278 DCHLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVLLNDDMEACISDLG 357 (487)
Q Consensus 278 ~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nill~~~~~~kl~DFg 357 (487)
+...|+|||++|..|.+++... ...++..+-.-+.-| |..||+|+||.++||++..++ +.++|||
T Consensus 72 ~~~~I~me~I~G~~lkd~l~~~-----------~~~~~r~vG~~vg~l---H~~givHGDLTtsNiIl~~~~-i~~IDfG 136 (204)
T COG3642 72 DNGLIVMEYIEGELLKDALEEA-----------RPDLLREVGRLVGKL---HKAGIVHGDLTTSNIILSGGR-IYFIDFG 136 (204)
T ss_pred CCCEEEEEEeCChhHHHHHHhc-----------chHHHHHHHHHHHHH---HhcCeecCCCccceEEEeCCc-EEEEECC
Confidence 8889999999999999898751 134566666677778 899999999999999999765 9999999
Q ss_pred Cccc
Q 011360 358 LAMA 361 (487)
Q Consensus 358 ~s~~ 361 (487)
++..
T Consensus 137 Lg~~ 140 (204)
T COG3642 137 LGEF 140 (204)
T ss_pred cccc
Confidence 9863
No 442
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=99.28 E-value=5.1e-12 Score=133.18 Aligned_cols=252 Identities=22% Similarity=0.278 Sum_probs=168.7
Q ss_pred cccccccccccccceeEEEEEecCCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCCCCccccc
Q 011360 192 DCFASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQIRHRNILPLL 271 (487)
Q Consensus 192 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~ 271 (487)
+.+.+++-+-.|.++.++.+. ....|...++|.... .........+....+-.++-...+|.+++..
T Consensus 804 d~~~i~~p~qS~sp~ss~p~~-pa~sgh~~~~~v~~~------------ap~i~~~~~~s~r~~s~~~i~p~~P~v~~~~ 870 (1205)
T KOG0606|consen 804 DGFEITKPSQSGSPSSSFPAS-PAGSGHTRPSKVHGL------------APKIRTNDYESIRSKSNILITPRSPAVVRSF 870 (1205)
T ss_pred ccceecccccCCCCcccccCC-ccccccccchhhhcc------------chhhccccccccCCccCccccCCCCceeccc
Confidence 346777788889999998885 333454444443311 1111122223333343444445678888877
Q ss_pred eEEecCCeeEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCCE
Q 011360 272 AHMVRPDCHLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVLLNDDMEA 351 (487)
Q Consensus 272 ~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nill~~~~~~ 351 (487)
..+....+.+++++|..+++|...|... ...+..-.......+..++++| |...+.|+|++|.|.+...+|..
T Consensus 871 ~s~~~rsP~~L~~~~~~~~~~~Skl~~~----~~~saepaRs~i~~~vqs~e~L---~s~~r~h~~~~p~~~l~~~~gh~ 943 (1205)
T KOG0606|consen 871 PSFPCRSPLPLVGHYLNGGDLPSKLHNS----GCLSAEPARSPILERVQSLESL---HSSLRKHRDLKPDSLLIAYDGHR 943 (1205)
T ss_pred CCCCCCCCcchhhHHhccCCchhhhhcC----CCcccccccchhHHHHhhhhcc---ccchhhcccccccchhhcccCCc
Confidence 7777778899999999999999988752 2445555667777888999999 77779999999999999999999
Q ss_pred EEeccCCccccCC------C---------------Cc----e----eeEeeecccccccCCcccCCCCCCchhHHHHHHH
Q 011360 352 CISDLGLAMAIPD------G---------------YT----R----VLISYVLGTMAYIAPEYFQQPELSEKCDIFSFGM 402 (487)
Q Consensus 352 kl~DFg~s~~~~~------~---------------~~----~----~~~~~~~gt~~y~aPE~l~~~~~~~~~DvwslG~ 402 (487)
+++|||.....+. . .. . .......+|+.|.+||.+.+......+|+|++|+
T Consensus 944 ~l~~~~t~~~vg~~~p~~~~sg~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~t~~~laPe~~lg~~hgs~ad~~~~g~ 1023 (1205)
T KOG0606|consen 944 PLTDFGTLSKVGLIPPTTDLSGPSSSGTPRRLSRSERRPQLSADEARRKHAVVGTPDYLAPEILLGRRHGSAADWWSSGV 1023 (1205)
T ss_pred ccCccccccccccccCcCCcccccccCccccccccccccccccchhhccccccCCCcccCCcccccccCCCcchhhhhhh
Confidence 9999983322110 0 00 0 0112356899999999999999999999999999
Q ss_pred HHHHHHhCCCCccccCCCCccccHHHHHHHHhcCCCCCccCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCChH
Q 011360 403 LLISLVRGVPSFVFHQNGEEICSPEWLRKVMNSKNPSRAIDPRLPGNGYEKKMLHVLKIAYICTLHDPEERPNSQ 477 (487)
Q Consensus 403 ~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~ 477 (487)
+++|.++|.+||....+... +..+.....+ ++ ...........+++...+..+|.+|-.+.
T Consensus 1024 ~l~e~l~g~pp~na~tpq~~------f~ni~~~~~~-------~p-~g~~~~s~~aq~~~~~ll~~~~~qr~~a~ 1084 (1205)
T KOG0606|consen 1024 CLFEVLTGIPPFNAETPQQI------FENILNRDIP-------WP-EGPEEGSYEAQDLINRLLTEEPTQRLGAK 1084 (1205)
T ss_pred hhhhhhcCCCCCCCcchhhh------hhccccCCCC-------CC-CCccccChhhhhhhhhhhccCchhccCcc
Confidence 99999999999954433211 1111111111 11 11223334567777788888999887765
No 443
>KOG3087 consensus Serine/threonine protein kinase [General function prediction only]
Probab=99.27 E-value=6e-11 Score=101.94 Aligned_cols=151 Identities=21% Similarity=0.267 Sum_probs=109.0
Q ss_pred cccccccccceeEEEEEecCCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCCCCccccceEEe
Q 011360 196 SLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQIRHRNILPLLAHMV 275 (487)
Q Consensus 196 ~~~~lg~G~~g~v~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~ 275 (487)
.+..+-+|+-+.|+++.+ .|+.+.||.=.. +-++.......-...+..+|+..+.++.--.|.-..-++.
T Consensus 11 ~l~likQGAEArv~~~~~---~Ge~~iIK~Rf~-------K~YRHP~LD~kLtr~Rt~~Ear~l~k~~~~GI~~P~l~~~ 80 (229)
T KOG3087|consen 11 SLELIKQGAEARVPRGSF---SGEAAIIKERFS-------KRYRHPALDQKLTRKRTKQEARLLAKCRALGIPAPRLIFI 80 (229)
T ss_pred cceeeeccceeeEeeecc---CCceeEEeeccc-------ccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCCceEEEE
Confidence 456788999999999987 678888885311 1122222223334566788999998886666666666777
Q ss_pred cCCeeEEEEEecCC-CCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCC---E
Q 011360 276 RPDCHLLVYEFMKN-GSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVLLNDDME---A 351 (487)
Q Consensus 276 ~~~~~~lv~E~~~~-gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nill~~~~~---~ 351 (487)
+...-.|+|||++| -++.+++.... ...........++..|-+.+.-| |..+|+||||..+||++..++. +
T Consensus 81 D~~~~~i~ME~~~g~~~vk~~i~~~~--~~~~~d~~~~~~~~~iG~~igkl---H~ndiiHGDLTTSNill~~~~~~~~~ 155 (229)
T KOG3087|consen 81 DTYGGQIYMEFIDGASTVKDFILSTM--EDESEDEGLAELARRIGELIGKL---HDNDIIHGDLTTSNILLRSDGNQITP 155 (229)
T ss_pred ecCCCeEEEEeccchhHHHHHHHHHc--cCcccchhHHHHHHHHHHHHHHh---hhCCeecccccccceEEecCCCcCce
Confidence 77778899999966 47888876532 22223333367888999999999 7888999999999999976553 5
Q ss_pred EEeccCCccc
Q 011360 352 CISDLGLAMA 361 (487)
Q Consensus 352 kl~DFg~s~~ 361 (487)
.++|||++..
T Consensus 156 ~lIdfgls~~ 165 (229)
T KOG3087|consen 156 ILIDFGLSSV 165 (229)
T ss_pred EEEeecchhc
Confidence 8999999854
No 444
>cd05151 ChoK Choline Kinase (ChoK). The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph
Probab=99.27 E-value=1.4e-11 Score=109.12 Aligned_cols=130 Identities=22% Similarity=0.211 Sum_probs=89.9
Q ss_pred ccccccccceeEEEEEecCCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCCCCcc-ccceEEe
Q 011360 197 LEKIGSGGCGEVYKAELPGSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQIRHRNIL-PLLAHMV 275 (487)
Q Consensus 197 ~~~lg~G~~g~v~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv-~l~~~~~ 275 (487)
++.++.|.++.||+++. .+..|++|...... .....+..|+.++..+.+.+++ +++...
T Consensus 3 ~~~l~~G~~~~vy~~~~---~~~~~~lK~~~~~~----------------~~~~~~~~E~~~l~~l~~~~~~P~~~~~~- 62 (170)
T cd05151 3 ISPLKGGMTNKNYRVEV---ANKKYVVRIPGNGT----------------ELLINRENEAENSKLAAEAGIGPKLYYFD- 62 (170)
T ss_pred eeecCCcccCceEEEEE---CCeEEEEEeCCCCc----------------ccccCHHHHHHHHHHHHHhCCCCceEEEe-
Confidence 35688999999999975 47789999752210 0112345677777777555544 344432
Q ss_pred cCCeeEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcC--CCCeeecCCCCCCEEeCCCCCEEE
Q 011360 276 RPDCHLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYH--SASIIHGDIKPRNVLLNDDMEACI 353 (487)
Q Consensus 276 ~~~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h--~~givH~Dlkp~Nill~~~~~~kl 353 (487)
....++||||++|.++... . . .....+.+++.+|+.||... ..+++|+|++|.||+++ ++.+++
T Consensus 63 -~~~~~lv~e~i~G~~l~~~-~--------~---~~~~~~~~l~~~l~~LH~~~~~~~~~~HgD~~~~Nil~~-~~~~~l 128 (170)
T cd05151 63 -PETGVLITEFIEGSELLTE-D--------F---SDPENLEKIAKLLKKLHSSPLPDLVPCHNDLLPGNFLLD-DGRLWL 128 (170)
T ss_pred -CCCCeEEEEecCCCccccc-c--------c---cCHHHHHHHHHHHHHHhCCCCCCceeecCCCCcCcEEEE-CCeEEE
Confidence 3345899999999877542 0 0 11345678999999995432 23369999999999999 668999
Q ss_pred eccCCcc
Q 011360 354 SDLGLAM 360 (487)
Q Consensus 354 ~DFg~s~ 360 (487)
+||+.+.
T Consensus 129 iDf~~a~ 135 (170)
T cd05151 129 IDWEYAG 135 (170)
T ss_pred Eeccccc
Confidence 9999875
No 445
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.25 E-value=8.3e-12 Score=125.26 Aligned_cols=245 Identities=21% Similarity=0.240 Sum_probs=171.5
Q ss_pred cccccccccccccceeEEEEEecCCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccC-CCCCcccc
Q 011360 192 DCFASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQI-RHRNILPL 270 (487)
Q Consensus 192 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpnIv~l 270 (487)
.+|..+..||.|.|+.++....+..++..|++|.+.........+ ..-..|+.+...+ .|.++++.
T Consensus 265 ~df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l~~~~~d-------------i~sl~ev~l~~~l~~~~~~~g~ 331 (524)
T KOG0601|consen 265 TDFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNGLATFASD-------------IFSLGEVILEAILGSHLPSVGK 331 (524)
T ss_pred CCcceeEEccCCccccceeeeecCCCCceEeChhhhccccchHhh-------------hcchhhhhHhhHhhcccccCCC
Confidence 457888999999999999987555788899999775433222221 1223455554444 78999999
Q ss_pred ceEEecCCeeEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCC-C
Q 011360 271 LAHMVRPDCHLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVLLNDD-M 349 (487)
Q Consensus 271 ~~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nill~~~-~ 349 (487)
+..|...++.|+--|||+++++...+.. ...+....++++..|++.++.++ |+..++|+|++|+||++..+ +
T Consensus 332 ~~~W~~~r~~~ip~e~~~~~s~~l~~~~----~~~~d~~~~~~~~~q~~~~l~~i---~s~~~~~~d~~psni~i~~~~~ 404 (524)
T KOG0601|consen 332 NSSWSQLRQGYIPLEFCEGGSSSLRSVT----SQMLDEDPRLRLTAQILTALNVI---HSKLFVHLDVKPSNILISNDGF 404 (524)
T ss_pred CCCccccccccCchhhhcCcchhhhhHH----HHhcCcchhhhhHHHHHhccccc---cchhhhcccccccceeeccchh
Confidence 9989888899999999999988876632 34567778889999999999999 78889999999999999986 7
Q ss_pred CEEEeccCCccccCCCCceeeEeeeccccccc--CCcccCCCCCCchhHHHHHHHHHHHHHhCCCCccccCCCCccccHH
Q 011360 350 EACISDLGLAMAIPDGYTRVLISYVLGTMAYI--APEYFQQPELSEKCDIFSFGMLLISLVRGVPSFVFHQNGEEICSPE 427 (487)
Q Consensus 350 ~~kl~DFg~s~~~~~~~~~~~~~~~~gt~~y~--aPE~l~~~~~~~~~DvwslG~~l~elltg~~pf~~~~~~~~~~~~~ 427 (487)
..+++|||....+.-.. ......-++. +|.......+..+.|++|||..+.+.+++...-.....
T Consensus 405 ~~~~~~~~~~t~~~~~~-----~~~~~~~r~~p~~~~~~e~~~~~~~~~~~sl~~~~~e~~~~~~ls~~~~~-------- 471 (524)
T KOG0601|consen 405 FSKLGDFGCWTRLAFSS-----GVFHHIDRLYPIAEILLEDYPHLSKADIFSLGLSVDEAITGSPLSESGVQ-------- 471 (524)
T ss_pred hhhccccccccccceec-----ccccccccccccchhhccccccccccccccccccccccccCcccCccccc--------
Confidence 78899999876422111 1122333444 55555666888999999999999999999543211110
Q ss_pred HHHHHHhcCCCCCccCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCChHHHHH
Q 011360 428 WLRKVMNSKNPSRAIDPRLPGNGYEKKMLHVLKIAYICTLHDPEERPNSQYVRC 481 (487)
Q Consensus 428 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~~il~ 481 (487)
|.. ...+.. +..++. ..++..+...+...++..||.+.++..
T Consensus 472 ~~~--i~~~~~-----p~~~~~-----~~~~q~~~kv~~~~~~~~~~l~~~l~~ 513 (524)
T KOG0601|consen 472 SLT--IRSGDT-----PNLPGL-----KLQLQVLLKVMINPDRKRRPSAVELSL 513 (524)
T ss_pred cee--eecccc-----cCCCch-----HHhhhhhhhhhcCCccccchhhhhhcc
Confidence 110 111111 111111 144666777789999999999987654
No 446
>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins. This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain
Probab=99.00 E-value=1.9e-09 Score=99.68 Aligned_cols=143 Identities=21% Similarity=0.240 Sum_probs=100.0
Q ss_pred cccccccceeEEEEEecCCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCC--CCccccceEEe
Q 011360 198 EKIGSGGCGEVYKAELPGSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQIRH--RNILPLLAHMV 275 (487)
Q Consensus 198 ~~lg~G~~g~v~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h--pnIv~l~~~~~ 275 (487)
+.++.|.++.+|++... +|..+++|....... ......+..|+.++..+.+ .++.+++.+..
T Consensus 4 ~~l~~G~~n~~~~v~~~--~g~~~ilK~~~~~~~--------------~~~~~~~~~E~~~~~~l~~~~~~vp~~~~~~~ 67 (223)
T cd05154 4 RQLSGGQSNLTYLLTAG--GGRRLVLRRPPPGAL--------------LPSAHDVAREYRVLRALAGTGVPVPKVLALCE 67 (223)
T ss_pred eecCCCccceEEEEEec--CCcceEEEeCCCccc--------------CcccccHHHHHHHHHHhhCCCCCCCCEEEECC
Confidence 56899999999999763 357899997632110 0123456778888888865 34566676655
Q ss_pred cC---CeeEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhc------------------------
Q 011360 276 RP---DCHLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMY------------------------ 328 (487)
Q Consensus 276 ~~---~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~------------------------ 328 (487)
.. +..++||||++|.++.+.+.. ..++......++.+++.+|..||+.
T Consensus 68 ~~~~~~~~~~v~e~i~G~~l~~~~~~-----~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~ 142 (223)
T cd05154 68 DPSVLGTPFYVMERVDGRVLRDRLLR-----PELSPEERRALARALADTLAALHSVDPAAVGLGDLGRPGGYLERQVARW 142 (223)
T ss_pred CCCccCCceEEEEEeCCEecCCCCCC-----CCCCHHHHHHHHHHHHHHHHHHhCCChhhcCCcccCCCCchHHHHHHHH
Confidence 53 256899999999888665420 2355556666677777777777631
Q ss_pred -----------------------------CCCCeeecCCCCCCEEeCC--CCCEEEeccCCccc
Q 011360 329 -----------------------------HSASIIHGDIKPRNVLLND--DMEACISDLGLAMA 361 (487)
Q Consensus 329 -----------------------------h~~givH~Dlkp~Nill~~--~~~~kl~DFg~s~~ 361 (487)
-...++|+|+.|.||+++. ++.+.|+||+.+..
T Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~~~iID~e~~~~ 206 (223)
T cd05154 143 RRQYDASRTDEPPAMERLLRWLEAHLPADSRPGLVHGDYRLGNVLFHPDEPRVVAVLDWELATL 206 (223)
T ss_pred HHHHHhhcccccHHHHHHHHHHHhhCCCCCCcEEEECCCCcccEEEcCCCCcEEEEEecccccc
Confidence 1356899999999999998 56689999998753
No 447
>PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.
Probab=98.99 E-value=7.4e-09 Score=92.35 Aligned_cols=142 Identities=19% Similarity=0.225 Sum_probs=85.1
Q ss_pred eEEEEEecCCCCceEEEEEeeecCchh-HHHHHH-H---------hhhhhhHHHHHHHHHHHHhccCCCC--CccccceE
Q 011360 207 EVYKAELPGSNGKMIAIKKVIVYAPIS-AAELIE-E---------DSKLRDSKLRQIRSEIITASQIRHR--NILPLLAH 273 (487)
Q Consensus 207 ~v~~~~~~~~~~~~vavK~~~~~~~~~-~~~~~~-~---------~~~~~~~~~~~~~~E~~~l~~l~hp--nIv~l~~~ 273 (487)
.||.|.. .+|..+|+|......... ..+.+. . .............+|+..|.++..- ++.+++.+
T Consensus 1 ~Vy~~~~--~~~~~~a~K~~r~~~~~Fk~~~~y~~~~~r~~~~~~~~~~~~~~~~~~~~E~~~L~~l~~~Gv~vP~p~~~ 78 (188)
T PF01163_consen 1 DVYHAID--PDGEEVAVKIYRTGRTSFKRRKKYRDYDYRFKKYRHKSSWRYLIREWAKKEFRNLKRLYEAGVPVPKPYDY 78 (188)
T ss_dssp EEEEEEE--CTTEEEEEEEE-S---SS-HHHHHTTTSTTSTTC--G--CHHHHHHHHHHHHHHHHHCCCTT-SS--EEEE
T ss_pred CEEEEEC--CCCCEEEEEEeccCceEEEEeeeeecccchhcccccccCHHHHHHHHHHHHHHHHHHHHHCCccCCcEEEE
Confidence 4888864 378899999987653211 111110 0 1111223345668899999999665 45555544
Q ss_pred EecCCeeEEEEEecC--CCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCCE
Q 011360 274 MVRPDCHLLVYEFMK--NGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVLLNDDMEA 351 (487)
Q Consensus 274 ~~~~~~~~lv~E~~~--~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nill~~~~~~ 351 (487)
. ..+|||||++ |..+..+... .++......++.+++..+..+. |..||+||||.+.||+++++ .+
T Consensus 79 ~----~~~ivME~I~~~G~~~~~l~~~------~~~~~~~~~~~~~il~~~~~~~--~~~givHGDLs~~NIlv~~~-~~ 145 (188)
T PF01163_consen 79 N----RNVIVMEYIGEDGVPLPRLKDV------DLSPEEPKELLEEILEEIIKML--HKAGIVHGDLSEYNILVDDG-KV 145 (188)
T ss_dssp E----TTEEEEE--EETTEEGGCHHHC------GGGGSTHHHHHHHHHHHHHHHH--HCTTEEESS-STTSEEEETT-CE
T ss_pred e----CCEEEEEecCCCccchhhHHhc------cccchhHHHHHHHHHHHHHHHH--HhcCceecCCChhhEEeecc-eE
Confidence 2 3469999998 6666554331 1113345667777877566543 78899999999999999987 89
Q ss_pred EEeccCCccccC
Q 011360 352 CISDLGLAMAIP 363 (487)
Q Consensus 352 kl~DFg~s~~~~ 363 (487)
.++|||.+....
T Consensus 146 ~iIDf~qav~~~ 157 (188)
T PF01163_consen 146 YIIDFGQAVDSS 157 (188)
T ss_dssp EE--GTTEEETT
T ss_pred EEEecCcceecC
Confidence 999999886543
No 448
>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional
Probab=98.92 E-value=1.9e-08 Score=95.15 Aligned_cols=147 Identities=20% Similarity=0.134 Sum_probs=94.2
Q ss_pred ccceeEEEEEecCCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCCCCc--cccceEEec----
Q 011360 203 GGCGEVYKAELPGSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQIRHRNI--LPLLAHMVR---- 276 (487)
Q Consensus 203 G~~g~v~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnI--v~l~~~~~~---- 276 (487)
.....|.++.+ .|+.|.||...... ..+..+.-... ......+.+|...+..+..-+| ..++++...
T Consensus 33 ~~~rrvvr~~~---~g~~~~vKr~~~~~---~~~~~k~l~~~-~~p~~~a~rE~~~l~~L~~~GIptP~pVa~~e~~~~~ 105 (268)
T PRK15123 33 LEGRRTLRFEL---AGKSYFLKWHRGTG---WGEIFKNLLSL-RMPVLGADREWRAIHRLHEVGVDTMTGVAFGERGSNP 105 (268)
T ss_pred CCCceEEEEEE---CCEEEEEEEecCCc---HHHHhhhhccc-ccccHHHHHHHHHHHHHHHcCCCCCCeeEEEEecCCC
Confidence 33344667765 57789999763221 11111110000 0111235677777766633333 233444432
Q ss_pred -CCeeEEEEEecCCC-CHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCC-------
Q 011360 277 -PDCHLLVYEFMKNG-SLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVLLND------- 347 (487)
Q Consensus 277 -~~~~~lv~E~~~~g-sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nill~~------- 347 (487)
....++|||++++. +|.+++.... ....+......++.+++..+.-| |..||+|+|+++.|||++.
T Consensus 106 ~~~~s~LVte~l~~~~sL~~~~~~~~--~~~~~~~~~~~ll~~la~~i~~L---H~~Gi~HgDL~~~NiLl~~~~~~~~~ 180 (268)
T PRK15123 106 ATRTSFIITEDLAPTISLEDYCADWA--TNPPDPRLKRMLIKRVATMVRDM---HAAGINHRDCYICHFLLHLPFPGREE 180 (268)
T ss_pred ccceeEEEEeeCCCCccHHHHHHhhc--ccCCCHHHHHHHHHHHHHHHHHH---HHCcCccCCCChhhEEEeccccCCCC
Confidence 23468999999876 8999885321 23445567778999999999999 8899999999999999975
Q ss_pred CCCEEEeccCCccc
Q 011360 348 DMEACISDLGLAMA 361 (487)
Q Consensus 348 ~~~~kl~DFg~s~~ 361 (487)
++.+.++||+.+..
T Consensus 181 ~~~~~LIDl~r~~~ 194 (268)
T PRK15123 181 DLKLSVIDLHRAQI 194 (268)
T ss_pred CceEEEEECCcccc
Confidence 46789999998753
No 449
>COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]
Probab=98.84 E-value=3.7e-08 Score=90.48 Aligned_cols=149 Identities=20% Similarity=0.205 Sum_probs=102.0
Q ss_pred cccccccccccceeEEEEEecCCCCceEEEEEeeecCchhHHHHHHHhhh------hh--hHHHHHHHHHHHHhccCCCC
Q 011360 194 FASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIVYAPISAAELIEEDSK------LR--DSKLRQIRSEIITASQIRHR 265 (487)
Q Consensus 194 ~~~~~~lg~G~~g~v~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~------~~--~~~~~~~~~E~~~l~~l~hp 265 (487)
..+...||.|--+.||.|.. ..|.++|||.-..+ ..+..++...... .+ ........+|.++|.+|...
T Consensus 93 e~iG~~IGvGKEsdVY~~~~--~~g~~~~vKfHR~G-rtsFrkvk~~R~y~~~~~h~sWl~~sRl~A~rEf~~L~~L~~~ 169 (304)
T COG0478 93 EAIGTKIGVGKESDVYVAID--PKGRKVAVKFHRLG-RTSFRKVKRNRDYLADKEHGSWLYVSRLAAEREFEALQRLYPE 169 (304)
T ss_pred HhhccccccCccceEEEEEC--CCCCEEEEEEeecC-chhhhhhcchhhhhccccCcchhhhHHHHHHHHHHHHHHhhhc
Confidence 45668999999999999975 37899999965544 4444433222222 11 12344568899999998554
Q ss_pred --CccccceEEecCCeeEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCE
Q 011360 266 --NILPLLAHMVRPDCHLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNV 343 (487)
Q Consensus 266 --nIv~l~~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Ni 343 (487)
.|.+.+++ +...+||||++|-.|...- +.......++..|+.-+..+ -..|+||||+.+=||
T Consensus 170 G~~VP~P~~~----nRHaVvMe~ieG~eL~~~r---------~~~en~~~il~~il~~~~~~---~~~GiVHGDlSefNI 233 (304)
T COG0478 170 GVKVPKPIAW----NRHAVVMEYIEGVELYRLR---------LDVENPDEILDKILEEVRKA---YRRGIVHGDLSEFNI 233 (304)
T ss_pred CCCCCCcccc----ccceeeeehcccceeeccc---------CcccCHHHHHHHHHHHHHHH---HHcCccccCCchheE
Confidence 67777664 4457999999887665431 12233344455555555544 356799999999999
Q ss_pred EeCCCCCEEEeccCCccc
Q 011360 344 LLNDDMEACISDLGLAMA 361 (487)
Q Consensus 344 ll~~~~~~kl~DFg~s~~ 361 (487)
++++||.+.++||-.+..
T Consensus 234 lV~~dg~~~vIDwPQ~v~ 251 (304)
T COG0478 234 LVTEDGDIVVIDWPQAVP 251 (304)
T ss_pred EEecCCCEEEEeCccccc
Confidence 999999999999987654
No 450
>COG4248 Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains [General function prediction only]
Probab=98.82 E-value=5.1e-08 Score=94.09 Aligned_cols=198 Identities=16% Similarity=0.153 Sum_probs=125.5
Q ss_pred eEEEEEecCCC-CHHHHHhh--hhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCCEEEecc
Q 011360 280 HLLVYEFMKNG-SLQDILDD--VSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVLLNDDMEACISDL 356 (487)
Q Consensus 280 ~~lv~E~~~~g-sL~~~l~~--~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nill~~~~~~kl~DF 356 (487)
+-+.|..+.|. ....+++. .+..-....|...++.++.++.+.+.| |..|.+-||+.++|+|+++++.+.|.|=
T Consensus 85 iGflmP~v~g~~pI~~~y~p~tRRqs~P~~~w~fllrvaRnlA~aFA~l---H~~Gh~vGDVn~~~~lVsd~~~V~LVds 161 (637)
T COG4248 85 IGFLMPKVSGKEPIHMIYSPATRRQSYPHCAWDFLLRVARNLASAFATL---HEHGHVVGDVNQNSFLVSDDSKVVLVDS 161 (637)
T ss_pred eEEecccCCCccchhhhcCchhhcccCCccccHHHHHHHHHHHHHHHHH---HhcCCcccccCccceeeecCceEEEEcc
Confidence 56778877654 23333321 123345678999999999999999999 7889999999999999999999999884
Q ss_pred CCccccCCCCceeeEeeecccccccCCcccC-----CCCCCchhHHHHHHHHHHHHHhC-CCCccccCCCCccc-cHH--
Q 011360 357 GLAMAIPDGYTRVLISYVLGTMAYIAPEYFQ-----QPELSEKCDIFSFGMLLISLVRG-VPSFVFHQNGEEIC-SPE-- 427 (487)
Q Consensus 357 g~s~~~~~~~~~~~~~~~~gt~~y~aPE~l~-----~~~~~~~~DvwslG~~l~elltg-~~pf~~~~~~~~~~-~~~-- 427 (487)
..-. +. .........+|...|++||.-. +-.-+...|.|.||+++++++.| +.||.+-.-..... ..|
T Consensus 162 Dsfq-i~--~ng~~~~cpVg~~eftPPElQ~~~sf~g~~r~~~hD~FGLavLiF~lL~ggrHPysGI~~~~~ap~p~E~~ 238 (637)
T COG4248 162 DSFQ-IN--ANGTLHLCPVGVSEFTPPELQTLPSFVGFERTANHDNFGLAVLIFHLLFGGRHPYSGIPLISDAPNPLETD 238 (637)
T ss_pred ccee-ec--cCCceEecccCccccCCHHHhccccccccCCCccccchhHHHHHHHHHhcCCCCCCcccccCCCCCcchhh
Confidence 3221 11 1222224556889999999654 23456789999999999999997 99996542111111 111
Q ss_pred HHHHHH----hcCCCCCccCCCCCCCCcHHHHHHHHHHHhhccCC--CCCCCCChHHHHHHHhhh
Q 011360 428 WLRKVM----NSKNPSRAIDPRLPGNGYEKKMLHVLKIAYICTLH--DPEERPNSQYVRCRLSQL 486 (487)
Q Consensus 428 ~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~--~P~~RPs~~~il~~L~~l 486 (487)
.....+ ....+...-+-.+ ........+.-+..+|+.. ++.-|||++-++..|..+
T Consensus 239 Ia~g~f~ya~~~~~g~~p~P~~~---P~~~Lpp~vqAlF~qaF~~~~~~~~RP~a~aW~aAl~al 300 (637)
T COG4248 239 IAHGRFAYASDQRRGLKPPPRSI---PLSMLPPDVQALFQQAFTESGVATPRPTAKAWVAALDAL 300 (637)
T ss_pred hhcceeeechhccCCCCCCCCCC---ChhhcCHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHH
Confidence 000000 0111111111111 1222233455566678765 366899999998887653
No 451
>KOG2137 consensus Protein kinase [Signal transduction mechanisms]
Probab=98.81 E-value=1.4e-09 Score=111.04 Aligned_cols=149 Identities=18% Similarity=0.272 Sum_probs=102.0
Q ss_pred HHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCCEEEeccCCccccCCCCc-------eeeEeeecccccccCCcccCCC
Q 011360 317 GVASGLEYLHMYHSASIIHGDIKPRNVLLNDDMEACISDLGLAMAIPDGYT-------RVLISYVLGTMAYIAPEYFQQP 389 (487)
Q Consensus 317 qi~~~L~~Lh~~h~~givH~Dlkp~Nill~~~~~~kl~DFg~s~~~~~~~~-------~~~~~~~~gt~~y~aPE~l~~~ 389 (487)
+++.|+.|+| .+.++||++|.|++|.++.++.+||+.|+++........ ............|.|||++.+.
T Consensus 107 ~v~dgl~flh--~sAk~VH~ni~p~~i~~na~~~wkl~Gf~f~v~~~~~~~~p~~~yd~~lp~~~~~~~~f~apE~~~~~ 184 (700)
T KOG2137|consen 107 NVADGLAFLH--RSAKVVHGNIQPEAIVVNANGDWKLAGFSFCVNANGPTEYPFSEYDPPLPLLLQPHLNFLAPEYLLGT 184 (700)
T ss_pred cccchhhhhc--cCcceeecccchhheeeccCcceeeccchhhhccCCCCccccccCCCCCChhhccCcccccchhhccc
Confidence 3458999998 567899999999999999999999999998765443211 1111112235579999999998
Q ss_pred CCCchhHHHHHHHHHHHHHh-CCCCccccCCCCccccHHHHHHHHhcCCCCCccCCCCCCCCcHHHHHHHHHHHhhccCC
Q 011360 390 ELSEKCDIFSFGMLLISLVR-GVPSFVFHQNGEEICSPEWLRKVMNSKNPSRAIDPRLPGNGYEKKMLHVLKIAYICTLH 468 (487)
Q Consensus 390 ~~~~~~DvwslG~~l~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~ 468 (487)
..+.++|+||+|+++|.+.. |+.-+......... .. .....+-...... .+.+.++.+-+.+++..
T Consensus 185 ~~~~~sd~fSlG~li~~i~~~gk~i~~a~~~~~~~----~~-~~~~~~~~~~~~s--------~~~p~el~~~l~k~l~~ 251 (700)
T KOG2137|consen 185 TNTPASDVFSLGVLIYTIYNGGKSIIAANGGLLSY----SF-SRNLLNAGAFGYS--------NNLPSELRESLKKLLNG 251 (700)
T ss_pred cccccccceeeeeEEEEEecCCcchhhccCCcchh----hh-hhccccccccccc--------ccCcHHHHHHHHHHhcC
Confidence 88999999999999999994 56555433221110 00 0111111111112 23345688888899999
Q ss_pred CCCCCCChHHHH
Q 011360 469 DPEERPNSQYVR 480 (487)
Q Consensus 469 ~P~~RPs~~~il 480 (487)
++.-||++..+.
T Consensus 252 ~~~~rp~~~~l~ 263 (700)
T KOG2137|consen 252 DSAVRPTLDLLL 263 (700)
T ss_pred CcccCcchhhhh
Confidence 999999777654
No 452
>KOG3741 consensus Poly(A) ribonuclease subunit [RNA processing and modification]
Probab=98.73 E-value=1.6e-07 Score=93.01 Aligned_cols=218 Identities=16% Similarity=0.166 Sum_probs=142.9
Q ss_pred ceeEEEEEecCCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCCCCccccceEEe----cCCee
Q 011360 205 CGEVYKAELPGSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQIRHRNILPLLAHMV----RPDCH 280 (487)
Q Consensus 205 ~g~v~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~----~~~~~ 280 (487)
..++|++. ...+|..|++|++...+..+. .....-++.++++.|+|||++..++. .+..+
T Consensus 289 ~~Ttyk~~-s~~DG~~YvLkRlhg~r~~~~---------------nk~t~lve~wkkl~h~NvV~frevf~t~tF~D~Sl 352 (655)
T KOG3741|consen 289 SITTYKAT-SNVDGNAYVLKRLHGDRDQST---------------NKDTSLVEAWKKLCHTNVVPFREVFLTYTFGDLSL 352 (655)
T ss_pred cceeEeee-eccCCceeeeeeeccccccCc---------------ccchHHHHHHHHhccCceeehhhhhhhhccCcceE
Confidence 35678885 456899999999833221111 01122356678899999999999887 34677
Q ss_pred EEEEEecCC-CCHHHHHhhh-----------hcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCC
Q 011360 281 LLVYEFMKN-GSLQDILDDV-----------SRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVLLNDD 348 (487)
Q Consensus 281 ~lv~E~~~~-gsL~~~l~~~-----------~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nill~~~ 348 (487)
++|++|.++ ++|.++.-.. ...+...++..+|.++.|++.||.++ |+.|+..+-|.|.+|+++.+
T Consensus 353 vlvYDYyP~s~TL~d~~F~~~~~t~~~n~~~~~~~~~~~e~~lW~y~~QLtaaL~sI---HssGLAck~L~~~kIlv~G~ 429 (655)
T KOG3741|consen 353 VLVYDYYPSSPTLYDLYFANPPFTKRTNSFYPSQNLKAPEEVLWSYISQLTAALYSI---HSSGLACKTLDLKKILVTGK 429 (655)
T ss_pred EEEEecCCCCchHHHHHccCCccccccccccccCCCCchHHHHHHHHHHHHHHHHHH---HhcCceeecccHhHeEeeCc
Confidence 999999875 5666643210 11244567889999999999999999 88899999999999999999
Q ss_pred CCEEEeccCCccccCCCCceeeEeeecccccccCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCccccCCCCccccHHH
Q 011360 349 MEACISDLGLAMAIPDGYTRVLISYVLGTMAYIAPEYFQQPELSEKCDIFSFGMLLISLVRGVPSFVFHQNGEEICSPEW 428 (487)
Q Consensus 349 ~~~kl~DFg~s~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DvwslG~~l~elltg~~pf~~~~~~~~~~~~~~ 428 (487)
..++|+..|....+..... +.+.+ -.+-|.=.||.++..|.||..-- +..+.. ...
T Consensus 430 ~RIriS~C~i~Dvl~~d~~----------------~~le~---~Qq~D~~~lG~ll~aLAt~~~ns----~~~d~~-~~s 485 (655)
T KOG3741|consen 430 MRIRISGCGIMDVLQEDPT----------------EPLES---QQQNDLRDLGLLLLALATGTENS----NRTDST-QSS 485 (655)
T ss_pred ceEEEecccceeeecCCCC----------------cchhH---HhhhhHHHHHHHHHHHhhccccc----ccccch-HHH
Confidence 8999988887654433220 11111 13468889999999999994321 001110 011
Q ss_pred HHHHHhcCCCCCccCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCChHHHHHHH
Q 011360 429 LRKVMNSKNPSRAIDPRLPGNGYEKKMLHVLKIAYICTLHDPEERPNSQYVRCRL 483 (487)
Q Consensus 429 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~~il~~L 483 (487)
.... ....++.++.+++......++++ -+.++++..+
T Consensus 486 ~~~~-----------------I~~~yS~D~rn~v~yl~s~~~~~-ksI~~llp~~ 522 (655)
T KOG3741|consen 486 HLTR-----------------ITTTYSTDLRNVVEYLESLNFRE-KSIQDLLPMI 522 (655)
T ss_pred HHHH-----------------hhhhhhHHHHHHHHHHHhcCccc-ccHHHHHHHH
Confidence 0111 11234456777777777777776 5666666543
No 453
>COG0661 AarF Predicted unusual protein kinase [General function prediction only]
Probab=98.67 E-value=5.7e-08 Score=99.52 Aligned_cols=157 Identities=20% Similarity=0.221 Sum_probs=95.9
Q ss_pred cccccccceeEEEEEecCCCCceEEEEEeeecCchhH--------------------------HHHHHHhhhhhhHHHHH
Q 011360 198 EKIGSGGCGEVYKAELPGSNGKMIAIKKVIVYAPISA--------------------------AELIEEDSKLRDSKLRQ 251 (487)
Q Consensus 198 ~~lg~G~~g~v~~~~~~~~~~~~vavK~~~~~~~~~~--------------------------~~~~~~~~~~~~~~~~~ 251 (487)
..++.++.|.||+|+++ +|+.||||+....-.... ..+..+.... -...-.
T Consensus 131 ~PiAsASIaQVH~A~L~--sG~~VAVKVqrPgi~~~i~~DL~il~~~a~~~~~~~~~~~~l~~~~vv~e~~~~-l~~ElD 207 (517)
T COG0661 131 EPIASASIAQVHRAVLK--SGEEVAVKVQRPGIRERIEADLKLLRRLARLIKRLPPGGRRLDLVEVVDEFEKR-LREELD 207 (517)
T ss_pred CchhhhhHhhheeEEec--CCCEEEEEecCCChHHHHHHHHHHHHHHHHHHHHcCCccccCChHHHHHHHHHH-HHHHhC
Confidence 56899999999999986 699999998854331110 0000000000 001112
Q ss_pred HHHHHHHhccC-----CCCCccccceEEecCCeeEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHH
Q 011360 252 IRSEIITASQI-----RHRNILPLLAHMVRPDCHLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLH 326 (487)
Q Consensus 252 ~~~E~~~l~~l-----~hpnIv~l~~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh 326 (487)
+.+|+..+.++ ..|++.-..=++.-...-.++|||++|..+.+...... ...+. ..++..++++ |+.
T Consensus 208 y~~EA~n~~~~~~nf~~~~~v~VP~V~we~t~~~VLtmE~i~Gi~i~d~~~l~~---~g~d~---k~ia~~~~~~--f~~ 279 (517)
T COG0661 208 YRREAANAERFRENFKDDPDVYVPKVYWEYTTRRVLTMEWIDGIKISDIAALKS---AGIDR---KELAELLVRA--FLR 279 (517)
T ss_pred HHHHHHHHHHHHHHcCCCCCeEeceeehhccCCcEEEEEeeCCEecccHHHHHh---cCCCH---HHHHHHHHHH--HHH
Confidence 34555555544 33444433334444566689999999999998843211 22332 2233333322 111
Q ss_pred hcCCCCeeecCCCCCCEEeCCCCCEEEeccCCccccCCC
Q 011360 327 MYHSASIIHGDIKPRNVLLNDDMEACISDLGLAMAIPDG 365 (487)
Q Consensus 327 ~~h~~givH~Dlkp~Nill~~~~~~kl~DFg~s~~~~~~ 365 (487)
+.-..|++|+|.+|.||++..+|.+.+.|||+...+...
T Consensus 280 q~~~dgffHaDpHpGNi~v~~~g~i~~lDfGi~g~l~~~ 318 (517)
T COG0661 280 QLLRDGFFHADPHPGNILVRSDGRIVLLDFGIVGRLDPK 318 (517)
T ss_pred HHHhcCccccCCCccceEEecCCcEEEEcCcceecCCHH
Confidence 113468999999999999999999999999998776543
No 454
>PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane
Probab=98.62 E-value=2.5e-07 Score=84.54 Aligned_cols=105 Identities=25% Similarity=0.316 Sum_probs=77.8
Q ss_pred HHHHHHHHHhccCCCC--CccccceEEecC----CeeEEEEEecCCC-CHHHHHhhhhcCCCCCChHHHHHHHHHHHHHH
Q 011360 250 RQIRSEIITASQIRHR--NILPLLAHMVRP----DCHLLVYEFMKNG-SLQDILDDVSRGRRELDWPSRHRIALGVASGL 322 (487)
Q Consensus 250 ~~~~~E~~~l~~l~hp--nIv~l~~~~~~~----~~~~lv~E~~~~g-sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L 322 (487)
....+|...+..+..- .+.+.+++.... ...++|+|++++. +|.+++... ...+......++.+++..+
T Consensus 56 ~ra~~E~~~~~~L~~~Gi~tP~pva~~~~r~~~~~~s~lite~l~~~~~L~~~~~~~----~~~~~~~~~~ll~~l~~~i 131 (206)
T PF06293_consen 56 SRAKREWRNLQRLREAGIPTPEPVAYGERRKGGGYRSYLITEALPGAQDLRDLLQQW----EQLDPSQRRELLRALARLI 131 (206)
T ss_pred hHHHHHHHHHHHHHHcCCCCCcEEEEEEEcCCCceeEEEEEEeCCCcccHHHHHHhh----cccchhhHHHHHHHHHHHH
Confidence 3456677666665332 234444444432 2458999999874 799988752 2255667788999999999
Q ss_pred HHHHhcCCCCeeecCCCCCCEEeCCCC---CEEEeccCCccc
Q 011360 323 EYLHMYHSASIIHGDIKPRNVLLNDDM---EACISDLGLAMA 361 (487)
Q Consensus 323 ~~Lh~~h~~givH~Dlkp~Nill~~~~---~~kl~DFg~s~~ 361 (487)
.-| |..||+|+|+++.|||++.++ .+.++||+-++.
T Consensus 132 ~~l---H~~gi~H~Dl~~~NILv~~~~~~~~~~lIDld~~~~ 170 (206)
T PF06293_consen 132 AKL---HDAGIYHGDLNPSNILVDPDDGQYRFYLIDLDRMRF 170 (206)
T ss_pred HHH---HHCcCCCCCCCcccEEEeCCCCceeEEEEcchhcee
Confidence 999 888999999999999999887 789999997754
No 455
>PF06176 WaaY: Lipopolysaccharide core biosynthesis protein (WaaY); InterPro: IPR009330 This family consists of several bacterial lipopolysaccharide core biosynthesis proteins (WaaY or RfaY). The waaY, waaQ, and waaP genes are located in the central operon of the waa (formerly rfa) locus on the chromosome of Escherichia coli. This locus contains genes whose products are involved in the assembly of the core region of the lipopolysaccharide molecule. WaaY is the enzyme that phosphorylates HepII in this system [].; GO: 0009244 lipopolysaccharide core region biosynthetic process
Probab=98.61 E-value=7e-07 Score=80.53 Aligned_cols=148 Identities=17% Similarity=0.199 Sum_probs=92.3
Q ss_pred ccccccccccccccceeEEEEEecCCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCCCCcccc
Q 011360 191 EDCFASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQIRHRNILPL 270 (487)
Q Consensus 191 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l 270 (487)
..+|...+++-......|.+... +|..+++|....-.......+ .+..+.....+.......+....-.....+
T Consensus 30 ~~~~~~~kv~k~~~r~~ValIei---~~~kyIlK~pr~~~~r~er~~---~sf~kg~~~~~l~~~~~~i~~~g~~~~~~~ 103 (229)
T PF06176_consen 30 DNNYKIIKVFKNTKRNYVALIEI---DGKKYILKEPREENRRPERRF---KSFFKGSEYSRLINNTDKIRNEGFTEPADP 103 (229)
T ss_pred hCCceEEEeecCCCccEEEEEEE---CCcEEEEeccchhhhhHHHHH---HHHhccHHHHHHHHHHHHHHHcCccccccc
Confidence 45688888888888888888765 677899997643211111111 112222333334444444444333444444
Q ss_pred ceEEec-----CCeeEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEe
Q 011360 271 LAHMVR-----PDCHLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVLL 345 (487)
Q Consensus 271 ~~~~~~-----~~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nill 345 (487)
+.+... ....+++|||++|..|.++.. ++. .++..+.+++.-+ |..|++|+|..|.|+++
T Consensus 104 yl~~ekk~~~~~~~~~ll~EYIeG~~l~d~~~--------i~e----~~~~ki~~~ikql---H~~G~~HGD~hpgNFlv 168 (229)
T PF06176_consen 104 YLAAEKKIFRYTSSYVLLMEYIEGVELNDIED--------IDE----DLAEKIVEAIKQL---HKHGFYHGDPHPGNFLV 168 (229)
T ss_pred eeeeeeeeccceeEEEEEEEEecCeecccchh--------cCH----HHHHHHHHHHHHH---HHcCCccCCCCcCcEEE
Confidence 433332 234568999999988876542 221 2445566677777 88999999999999999
Q ss_pred CCCCCEEEeccCCcc
Q 011360 346 NDDMEACISDLGLAM 360 (487)
Q Consensus 346 ~~~~~~kl~DFg~s~ 360 (487)
++++ +++.||+..+
T Consensus 169 ~~~~-i~iID~~~k~ 182 (229)
T PF06176_consen 169 SNNG-IRIIDTQGKR 182 (229)
T ss_pred ECCc-EEEEECcccc
Confidence 9664 9999998654
No 456
>PRK09902 hypothetical protein; Provisional
Probab=98.54 E-value=9.9e-07 Score=79.28 Aligned_cols=147 Identities=19% Similarity=0.122 Sum_probs=100.7
Q ss_pred cccccccceeEEEEEecCCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCCCC--ccccceEEe
Q 011360 198 EKIGSGGCGEVYKAELPGSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQIRHRN--ILPLLAHMV 275 (487)
Q Consensus 198 ~~lg~G~~g~v~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpn--Iv~l~~~~~ 275 (487)
..-|.||.+-|+...+ .|..+-+|........+ -..+.....+.+|...+.+|..-+ +.+......
T Consensus 24 pN~~rgG~SgV~r~~~---~g~~~ylKrq~nhl~~s---------~r~P~g~ptf~rE~~~L~~L~~~GvPVP~pvf~~~ 91 (216)
T PRK09902 24 PNYRRNGMSGVQCVER---NGKKLYVKRMTHHLFHS---------VRYPFGRPTIVREVAVIKELERAGVIVPKIVFGEA 91 (216)
T ss_pred CCcCCCCcceEEEEEe---CCcEEEEEeccCccccc---------ccCCCCchHHHHHHHHHHHHHHcCCCCCccceeee
Confidence 4467899999999876 44578888763211000 000234456788888888774322 444442211
Q ss_pred c--C--CeeEEEEEecCC-CCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCC
Q 011360 276 R--P--DCHLLVYEFMKN-GSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVLLNDDME 350 (487)
Q Consensus 276 ~--~--~~~~lv~E~~~~-gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nill~~~~~ 350 (487)
. + ...+||+|-++| -+|.+++.. ..-.+.+......+..+++..+.-| |+.|+.|+|+.+.||+++.++.
T Consensus 92 ~k~~~~~rA~LVTe~L~g~~~L~~~l~~--~~~~~~~~~~k~~il~~va~~ia~L---H~~Gv~Hgdly~khIll~~~g~ 166 (216)
T PRK09902 92 VKIEGEWRALLVTEDMAGFISIADWYAQ--HAVSPYSDEVRQAMLKAVALAFKKM---HSVNRQHGCCYVRHIYVKTEGK 166 (216)
T ss_pred eccCCceEEEEEEEeCCCCccHHHHHhc--CCcCCcchHHHHHHHHHHHHHHHHH---HHCCCcCCCCCHhheeecCCCC
Confidence 1 1 235799997743 588888754 2223456677788999999999999 8889999999999999986677
Q ss_pred --EEEeccCCccc
Q 011360 351 --ACISDLGLAMA 361 (487)
Q Consensus 351 --~kl~DFg~s~~ 361 (487)
++++||--++.
T Consensus 167 ~~v~lIDlEk~r~ 179 (216)
T PRK09902 167 AEAGFLDLEKSRR 179 (216)
T ss_pred eeEEEEEhhccch
Confidence 99999987654
No 457
>KOG4658 consensus Apoptotic ATPase [Signal transduction mechanisms]
Probab=98.23 E-value=6.1e-07 Score=98.02 Aligned_cols=117 Identities=14% Similarity=0.122 Sum_probs=93.0
Q ss_pred HHHHHHHHHHHhHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhhccCCChhHHHHHHHhhhhhccchhhhhhhhhHH
Q 011360 25 ESIETILQKLTKDWLGQFARQAQIQADLIGWKTMMVKINKVLDDAIEKQTKEEPVKIWLGKLQHLACDVDYLLDEFQTEA 104 (487)
Q Consensus 25 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~l~~a~~~~~~~~~~~~w~~~l~~~~yd~~~~~~~~~~~~ 104 (487)
+.+++.++|+.+++..++....|+++.+..|++.|..++.+|+||++++.....++.|...+++++|++||+++.|..+.
T Consensus 3 ~~~s~~~~~~~~~l~~~~~~~~~~~~~i~~Lk~~L~~l~~~l~d~~a~~~~~~~~~~~~e~~~~~~~~~e~~~~~~~v~~ 82 (889)
T KOG4658|consen 3 ACVSFGVEKLDQLLNRESECLDGKDNYILELKENLKALQSALEDLDAKRDDLERRVNWEEDVGDLVYLAEDIIWLFLVEE 82 (889)
T ss_pred eEEEEehhhHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34455678899999999999999999999999999999999999999999999999999999999999999999998888
Q ss_pred HHHHhhh-----------------chhhhhhHHHHHHHHHHHHHHHHhhccccC
Q 011360 105 FQTMLLQ-----------------DADAMSKVKEVNARLQDIAWQINVLGLKES 141 (487)
Q Consensus 105 ~~~~l~~-----------------~~~~~~r~~ei~~~l~~i~~~~~~~~l~~~ 141 (487)
...+... .+.....+..+..++..+..++..++.+..
T Consensus 83 ~~~~~~~~l~~~~~~~~~~c~~~~~~~~~~~~~~~~~rv~~~l~~ve~l~~~~~ 136 (889)
T KOG4658|consen 83 IERKANDLLSTRSVERQRLCLCGFCSKNVSDSYKYGKRVSKVLREVESLGSKGV 136 (889)
T ss_pred HHHHHhHHhhhhHHHHHHHhhhhhHhHhhhhhHhHHHHHHHHHHHHHHhccccc
Confidence 6653221 011222334455666666666777765543
No 458
>TIGR02172 Fb_sc_TIGR02172 Fibrobacter succinogenes paralogous family TIGR02172. This model describes a paralogous family of five proteins, likely to be enzymes, in the rumen bacterium Fibrobacter succinogenes S85. Members show homology to proteins described by PFAM model pfam01636, a phosphotransferase enzyme family associated with resistance to aminoglycoside antibiotics. However, members of this family score below the current trusted and noise cutoffs for pfam01636.
Probab=98.23 E-value=1.3e-05 Score=74.37 Aligned_cols=140 Identities=16% Similarity=0.196 Sum_probs=79.5
Q ss_pred cccccccceeEEEEEecCCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCCCC--ccccceEEe
Q 011360 198 EKIGSGGCGEVYKAELPGSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQIRHRN--ILPLLAHMV 275 (487)
Q Consensus 198 ~~lg~G~~g~v~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpn--Iv~l~~~~~ 275 (487)
..+|.|..+.||+. .+..+++|..... . ......+|.++++.+..-+ +.+.+++..
T Consensus 7 ~~i~~G~t~~~y~~-----~~~~~VlR~~~~~--------------~---~~~~i~~E~~~l~~l~~~glpvP~~~~~~~ 64 (226)
T TIGR02172 7 TQTGEGGNGESYTH-----KTGKWMLKLYNPG--------------F---DKETIKREFDASRKVFSLGIPTPHPFDLVE 64 (226)
T ss_pred eeecCCCCcceeEe-----cCCCEEEEeCCCC--------------C---CHHHHHHHHHHHHHHHHcCCCCCceEEEEe
Confidence 57899999999974 2445778865221 0 1223466888887774332 456677776
Q ss_pred cCCeeEEEEEecCCCC-HHHHH--------------hh----hhc-CCCCCChHHHH-HHHH----------HHHH-HHH
Q 011360 276 RPDCHLLVYEFMKNGS-LQDIL--------------DD----VSR-GRRELDWPSRH-RIAL----------GVAS-GLE 323 (487)
Q Consensus 276 ~~~~~~lv~E~~~~gs-L~~~l--------------~~----~~~-~~~~l~~~~~~-~i~~----------qi~~-~L~ 323 (487)
..+...+|||+++|.+ +...+ .. .-. .....+..... .+.. .+.. ...
T Consensus 65 ~~~~~glv~e~i~G~~~~~~~~~~~~~~~~~l~~~la~~l~~lH~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~l~~ 144 (226)
T TIGR02172 65 DGGRLGLIYELIVGKRSFSRIISDNPSRLEEIAKIFAEMAKKLHSTKCDTSTFQSYKEKIRKFIEEKDFVPKDYKEKARA 144 (226)
T ss_pred cCCeeeeeeeecCCccchhhhhcCCHHHHHHHHHHHHHHHHHHhCCCCCCCcHHHHHHHHHHHHHhccCCCHHHHHHHHH
Confidence 7777889999998863 21111 00 000 00011111110 0100 0011 112
Q ss_pred HHHh-cCCCCeeecCCCCCCEEeCCCCCEEEeccCCcc
Q 011360 324 YLHM-YHSASIIHGDIKPRNVLLNDDMEACISDLGLAM 360 (487)
Q Consensus 324 ~Lh~-~h~~givH~Dlkp~Nill~~~~~~kl~DFg~s~ 360 (487)
+|.. .-...++|+|+.|.||++++++ +.++||+.+.
T Consensus 145 ~l~~~~~~~~~~HgD~~~~Nii~~~~~-~~iIDwe~a~ 181 (226)
T TIGR02172 145 FIKEVPDTSTCLHGDFQIGNLITSGKG-TYWIDLGDFG 181 (226)
T ss_pred HHHhCCCCCceEecCCCCCcEEEcCCC-cEEEechhcC
Confidence 2211 1234578999999999999888 9999999774
No 459
>KOG1235 consensus Predicted unusual protein kinase [General function prediction only]
Probab=98.21 E-value=1.1e-05 Score=82.63 Aligned_cols=156 Identities=20% Similarity=0.254 Sum_probs=90.4
Q ss_pred cccccccceeEEEEEecCCCCceEEEEEeeecCchhH-HH-----H----HHHhhh------hhhHHHH------HHHHH
Q 011360 198 EKIGSGGCGEVYKAELPGSNGKMIAIKKVIVYAPISA-AE-----L----IEEDSK------LRDSKLR------QIRSE 255 (487)
Q Consensus 198 ~~lg~G~~g~v~~~~~~~~~~~~vavK~~~~~~~~~~-~~-----~----~~~~~~------~~~~~~~------~~~~E 255 (487)
+.||..+.|.||+|+.+ +|+.||||+.+..-.... .+ . +.+... .-++..+ .|.+|
T Consensus 167 ~piaaASlaQVhrA~L~--~G~~VaVKVQ~P~l~~~~~~Dl~~~~~~~~~l~k~~p~~~~~~lvdE~~~~L~~ELDF~~E 244 (538)
T KOG1235|consen 167 EPIAAASLAQVHRARLK--NGEDVAVKVQHPGLEKLIMLDLRNLRLLAKVLQKFFPDFDLVWLVDEIAKSLPQELDFTKE 244 (538)
T ss_pred chhhhcchhheEEEEec--CCCEEEEEecCcChHHHHHHHHHHHHHHHHHHHHhCcCCchhhHHHHHHhhhHhhcchHHH
Confidence 56999999999999886 699999998754332110 00 0 000000 0001111 23444
Q ss_pred HHHhcc----CCCCC------ccccceEEecCCeeEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHH
Q 011360 256 IITASQ----IRHRN------ILPLLAHMVRPDCHLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYL 325 (487)
Q Consensus 256 ~~~l~~----l~hpn------Iv~l~~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~L 325 (487)
++...+ +.|-+ |.++|-. -...-.++||||+|..+.|.-. .. ...++.. .++..+.++. +
T Consensus 245 A~Nae~~~~~f~~~~~~~~V~VP~Vy~~--~st~RVLtME~~~G~~i~Dl~~-i~--~~gi~~~---~i~~~l~~~~--~ 314 (538)
T KOG1235|consen 245 AKNAERFRENFKDFSLLTYVLVPKVYWD--LSTKRVLTMEYVDGIKINDLDA-ID--KRGISPH---DILNKLVEAY--L 314 (538)
T ss_pred HHhHHHHHHHHHhcccccceeCCeehhh--cCcceEEEEEecCCccCCCHHH-HH--HcCCCHH---HHHHHHHHHH--H
Confidence 443332 34444 3333322 2345579999999998877532 11 1223333 3333333332 2
Q ss_pred HhcCCCCeeecCCCCCCEEeCC----CCCEEEeccCCccccCCC
Q 011360 326 HMYHSASIIHGDIKPRNVLLND----DMEACISDLGLAMAIPDG 365 (487)
Q Consensus 326 h~~h~~givH~Dlkp~Nill~~----~~~~kl~DFg~s~~~~~~ 365 (487)
+..-..|++|+|-.|.||++.. ++.+.+.|||+.......
T Consensus 315 ~qIf~~GffHaDPHPGNilv~~~~~~~~~ivllDhGl~~~is~~ 358 (538)
T KOG1235|consen 315 EQIFKTGFFHADPHPGNILVRPNPEGDEEIVLLDHGLYAVISHK 358 (538)
T ss_pred HHHHhcCCccCCCCCCcEEEecCCCCCccEEEEcccccccccHH
Confidence 2224567999999999999984 678999999998766543
No 460
>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]
Probab=98.16 E-value=3.4e-05 Score=83.80 Aligned_cols=198 Identities=18% Similarity=0.196 Sum_probs=135.8
Q ss_pred HHHHHHHHHHhccCCCCCccccceEEecCCe----eEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHH
Q 011360 249 LRQIRSEIITASQIRHRNILPLLAHMVRPDC----HLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEY 324 (487)
Q Consensus 249 ~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~----~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~ 324 (487)
......|...+.+..|+|++.++.+...... ..+..++|...++.+.+.. -..++..+.+.+..++.+||.|
T Consensus 226 i~~~E~e~~~l~k~~~~n~~~~~~~~le~~~~g~~~~v~~~~~s~~~~~~~~q~----v~~i~~~~~r~~~~~~~~GL~~ 301 (1351)
T KOG1035|consen 226 IQTTEIELESLSKIAHDNLGGYFVYGLERLFRGIVLDVLQEICSKVELRSLLQS----VGSIPLETLRILHQKLLEGLAY 301 (1351)
T ss_pred HHHHHHHHHHHHhhccccccceeEEeehhhcchHHHHHHHhhcCccchHHHHhh----ccccCHHHHHHHHHHHhhhHHH
Confidence 3344567777888899999999988765432 2355688888888888865 4567888999999999999999
Q ss_pred HHhcCCCCeeecCCCCC---CEEeCCCCCEEEe--ccCCccccCCCCceeeEeeecccccccCCcccCCCCCCch--hHH
Q 011360 325 LHMYHSASIIHGDIKPR---NVLLNDDMEACIS--DLGLAMAIPDGYTRVLISYVLGTMAYIAPEYFQQPELSEK--CDI 397 (487)
Q Consensus 325 Lh~~h~~givH~Dlkp~---Nill~~~~~~kl~--DFg~s~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~--~Dv 397 (487)
+|.. ...|.-+..+ +--.+..+.+..+ ||+.+...+...... ....+..|.+||.+....++.+ .|+
T Consensus 302 ~h~~---~l~~v~L~~s~~~~~~~~~e~~~~~sl~~~~ss~~l~d~~~~~---~~~~~~~~~~~e~~~~~~~~~~r~~dL 375 (1351)
T KOG1035|consen 302 LHSL---SLEHVVLSASSSKESTVDGEGVVAISLSDFDSSKPLPDNEKSF---SDLLAEIRNADEDLKENTAKKSRLTDL 375 (1351)
T ss_pred HHHh---ccceeEEecccccccccCccceeecchhhhcccccCCCcccch---hhcCccccccccccccccchhhhhhHH
Confidence 9654 3555444444 4444566667766 999887765543322 2235667889998887766554 799
Q ss_pred HHHHHHHHHHHhCCCCccccCCCCccccHHHHHHHHhcCCCCCccCCCCCCCCcHHHHHHHHHHHhhccCCCCCCCCChH
Q 011360 398 FSFGMLLISLVRGVPSFVFHQNGEEICSPEWLRKVMNSKNPSRAIDPRLPGNGYEKKMLHVLKIAYICTLHDPEERPNSQ 477 (487)
Q Consensus 398 wslG~~l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~ 477 (487)
|.+|.....+..|..+-.... ....++ +.... ....+....|+..++++|+++.
T Consensus 376 ~~lgll~~~~~~~~~i~~~~~---------~~~~~l---------~~~~~--------~~~~d~~~~~~~~~~~~Rl~~~ 429 (1351)
T KOG1035|consen 376 WCLGLLLLQLSQGEDISEKSA---------VPVSLL---------DVLST--------SELLDALPKCLDEDSEERLSAL 429 (1351)
T ss_pred HHHHHHHhhhhhcCccccccc---------chhhhh---------ccccc--------hhhhhhhhhhcchhhhhccchh
Confidence 999999999998854431110 001111 11011 0256777889999999999999
Q ss_pred HHHHH
Q 011360 478 YVRCR 482 (487)
Q Consensus 478 ~il~~ 482 (487)
+++..
T Consensus 430 ~ll~~ 434 (1351)
T KOG1035|consen 430 ELLTH 434 (1351)
T ss_pred hhhhc
Confidence 88753
No 461
>COG1718 RIO1 Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms / Cell division and chromosome partitioning]
Probab=98.16 E-value=2.4e-05 Score=71.57 Aligned_cols=152 Identities=24% Similarity=0.294 Sum_probs=89.6
Q ss_pred ccccccceeEEEEEecCCCCceEEEEEeeecCchhHH-H-HHH-------HhhhhhhHHHHHHHHHHHHhccCC--CCCc
Q 011360 199 KIGSGGCGEVYKAELPGSNGKMIAIKKVIVYAPISAA-E-LIE-------EDSKLRDSKLRQIRSEIITASQIR--HRNI 267 (487)
Q Consensus 199 ~lg~G~~g~v~~~~~~~~~~~~vavK~~~~~~~~~~~-~-~~~-------~~~~~~~~~~~~~~~E~~~l~~l~--hpnI 267 (487)
.|..|--.+||+|.- .++..+|+|++......... + .+. .....+.....=...|+..|.++. +-.+
T Consensus 55 ~istGKEA~Vy~a~~--~~~~~~avKiyr~~t~~fk~~~~Yi~gd~Rf~~~~~~rr~lv~~W~~kEf~NL~R~~eAGVrv 132 (268)
T COG1718 55 CISTGKEANVYLAET--GDGRYVAVKIYRTSTSEFKRIRRYIQGDPRFRNSRSNRRKLVFAWARKEFRNLKRAYEAGVRV 132 (268)
T ss_pred eecCCcceEEEeecc--CCCceEEEEEEehhhhhhhhHHHHHhcChhhhcCCCCHHHHHHHHHHHHHHHHHHHHHcCCCC
Confidence 566777788999853 46889999998653321111 0 000 000000111111256777776662 3334
Q ss_pred cccceEEecCCeeEEEEEecCCCCH-HHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeC
Q 011360 268 LPLLAHMVRPDCHLLVYEFMKNGSL-QDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVLLN 346 (487)
Q Consensus 268 v~l~~~~~~~~~~~lv~E~~~~gsL-~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nill~ 346 (487)
.+.+.+. ...+||||+..... .=.|. .-++.......+..++++.+.-|- +..|+||+||..=|||+.
T Consensus 133 P~Pi~~~----~nVLvMEfIg~~g~pAP~Lk-----Dv~~e~~e~~~~~~~~v~~~~~l~--~~a~LVHgDLSEyNiL~~ 201 (268)
T COG1718 133 PEPIAFR----NNVLVMEFIGDDGLPAPRLK-----DVPLELEEAEGLYEDVVEYMRRLY--KEAGLVHGDLSEYNILVH 201 (268)
T ss_pred CCceeec----CCeEEEEeccCCCCCCCCcc-----cCCcCchhHHHHHHHHHHHHHHHH--HhcCcccccchhhheEEE
Confidence 4444433 23599999944310 00111 122222246667777877777773 347899999999999999
Q ss_pred CCCCEEEeccCCccccCC
Q 011360 347 DDMEACISDLGLAMAIPD 364 (487)
Q Consensus 347 ~~~~~kl~DFg~s~~~~~ 364 (487)
++.+.++|||.|.....
T Consensus 202 -~~~p~iID~~QaV~~~h 218 (268)
T COG1718 202 -DGEPYIIDVSQAVTIDH 218 (268)
T ss_pred -CCeEEEEECccccccCC
Confidence 77999999998876543
No 462
>PF01636 APH: Phosphotransferase enzyme family This family is part of the larger protein kinase superfamily.; InterPro: IPR002575 This entry consists of bacterial antibiotic resistance proteins, which confer resistance to various aminoglycosides they include:- aminoglycoside 3'-phosphotransferase or kanamycin kinase / neomycin-kanamycin phosphotransferase and streptomycin 3''-kinase or streptomycin 3''-phosphotransferase. The aminoglycoside phosphotransferases inactivate aminoglycoside antibiotics via phosphorylation []. The proteins are found in a range of taxonomic groups.; PDB: 2PPQ_A 2Q83_B 3TDV_B 3TDW_A 3I0O_A 3I0Q_A 3I1A_B 3Q2M_A 3HAV_C 2PUI_B ....
Probab=98.02 E-value=7e-05 Score=69.54 Aligned_cols=144 Identities=19% Similarity=0.212 Sum_probs=78.2
Q ss_pred ccccccccceeEEEEEecCCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCCC--CccccceEE
Q 011360 197 LEKIGSGGCGEVYKAELPGSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQIRHR--NILPLLAHM 274 (487)
Q Consensus 197 ~~~lg~G~~g~v~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp--nIv~l~~~~ 274 (487)
++.++.|..+.||+.... +..+++|.... ......+..|..+++.+... .+.+++...
T Consensus 2 i~~l~~G~~n~~~~v~~~---~~~~vlK~~~~-----------------~~~~~~~~~e~~~~~~l~~~~~pvP~~~~~~ 61 (239)
T PF01636_consen 2 IRPLSGGFSNRVYRVTTD---DGRYVLKFYRP-----------------PDAAERLRREAAVLRQLAEHGIPVPRVLAFD 61 (239)
T ss_dssp EEEEEESSSSEEEEEEET---TSEEEEEEESS-----------------HHHHHHHHHHHHHHHHHHHTTSBS--EEEEE
T ss_pred CccCCCCCeeeEEEEEEC---CcEEEEEEeCC-----------------CCCHHHHHHHHHHHHHHHhcCCCCceEEeec
Confidence 357889999999999763 35899998622 12334555677776666322 345555533
Q ss_pred e---cCCeeEEEEEecCCCCHHH----------------HHhhhhc---CCCCCChHHH--HHH----------------
Q 011360 275 V---RPDCHLLVYEFMKNGSLQD----------------ILDDVSR---GRRELDWPSR--HRI---------------- 314 (487)
Q Consensus 275 ~---~~~~~~lv~E~~~~gsL~~----------------~l~~~~~---~~~~l~~~~~--~~i---------------- 314 (487)
. .....+++|++++|.++.. .+..... ....+..... ...
T Consensus 62 ~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 141 (239)
T PF01636_consen 62 TSDEFNGFPYLLMEYIPGRPLDDELSPEQRPELLRQLGRALAQLHQVPPPFSPFADWPEWRLEFLRQLESWTARLRASEL 141 (239)
T ss_dssp EETEETSEEEEEEEEESSEEHHHTSTHHHHHHHHHHHHHHHHHHHHSHTTCCCHTHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_pred ccccccccceEEEEEeccccccccccccccccccccchhhhhhcccccccccccccccccccccccccccccccccchhh
Confidence 2 2334689999999988887 1111101 1111111100 000
Q ss_pred ---HHHHHH-HHHHHHh----cCCCCeeecCCCCCCEEeC-CCCCEEEeccCCcc
Q 011360 315 ---ALGVAS-GLEYLHM----YHSASIIHGDIKPRNVLLN-DDMEACISDLGLAM 360 (487)
Q Consensus 315 ---~~qi~~-~L~~Lh~----~h~~givH~Dlkp~Nill~-~~~~~kl~DFg~s~ 360 (487)
...+.. .+..++. .....++|+|+.|.||+++ +++.+-|+||+.+.
T Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~HgD~~~~Nil~~~~~~~i~iID~e~a~ 196 (239)
T PF01636_consen 142 FDDLEELEERLLQELEALLPKPLPPVLIHGDLHPGNILVDPSDGRIGIIDFEDAG 196 (239)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCCSCEEEE-SS-SGGGEEEESSTTEEEE--GTT-E
T ss_pred hhhhHHHHHHHHHHHHhhhccCCCcEEEEeccccccceeeeccceeEEEecccce
Confidence 011111 2333322 2457799999999999999 55666799998763
No 463
>PF13095 FTA2: Kinetochore Sim4 complex subunit FTA2
Probab=97.97 E-value=6.4e-05 Score=67.19 Aligned_cols=140 Identities=19% Similarity=0.294 Sum_probs=89.2
Q ss_pred cccccccccccccc-eeEEEEEecCCCCceEEEEEeeecCchhHH---HHHH-Hh--hhhhhHHHHHHHHHHHHhccC--
Q 011360 192 DCFASLEKIGSGGC-GEVYKAELPGSNGKMIAIKKVIVYAPISAA---ELIE-ED--SKLRDSKLRQIRSEIITASQI-- 262 (487)
Q Consensus 192 ~~~~~~~~lg~G~~-g~v~~~~~~~~~~~~vavK~~~~~~~~~~~---~~~~-~~--~~~~~~~~~~~~~E~~~l~~l-- 262 (487)
..++.++.||.|.- |.||+++. +|+.+|+|.+..+...... .... .. ..........|..|.+...+|
T Consensus 37 ~~I~flefLg~g~~~~~V~kv~I---~g~~YALKlf~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~PF~~ECRAfgRLke 113 (207)
T PF13095_consen 37 DDIEFLEFLGHGSHDGYVFKVEI---DGRIYALKLFRFWDYTEPDYTRERFAGHETSLSTPAHYADPFNCECRAFGRLKE 113 (207)
T ss_pred CcEeeeeecCCCCceeEEEEEEE---CCeEEEEEEeeccccCCCccccccccccccccchhhhhcChHHHHHHhhHHHHh
Confidence 56899999999999 99999987 6789999994333221111 1010 00 001113445678888877766
Q ss_pred -CCCCc--cccceEEecC------------------CeeEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHH
Q 011360 263 -RHRNI--LPLLAHMVRP------------------DCHLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASG 321 (487)
Q Consensus 263 -~hpnI--v~l~~~~~~~------------------~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~ 321 (487)
.+.++ |+.+|+..-. ....||.||.+... .+.... +.++.+-
T Consensus 114 ~~~e~~~Avkc~Gyl~L~~~~q~~~~~~~~~~~~~~~~~aIVKD~v~~~~-------------~~~~~~----~~~~~~d 176 (207)
T PF13095_consen 114 AGREGLWAVKCHGYLLLTEDQQFEQLRQRGSDHRPLPIRAIVKDFVPDDP-------------PLQIRD----IPQMLRD 176 (207)
T ss_pred ccccCceEEEeeEEEEEchHHHHHHhhcccccCCCCccEEEEEeecCCcc-------------ccchhH----HHHHHHH
Confidence 45566 9999987422 11257888775543 122222 2334444
Q ss_pred HHHHHhcCCCCeeecCCCCCCEEeCCCCCEEEeccCCc
Q 011360 322 LEYLHMYHSASIIHGDIKPRNVLLNDDMEACISDLGLA 359 (487)
Q Consensus 322 L~~Lh~~h~~givH~Dlkp~Nill~~~~~~kl~DFg~s 359 (487)
+..+ |..||+-+|+++.|.. .-||+|||.+
T Consensus 177 l~~~---~k~gI~~~Dv~~~ny~-----~G~lvDfs~~ 206 (207)
T PF13095_consen 177 LKIL---HKLGIVPRDVKPRNYR-----GGKLVDFSSS 206 (207)
T ss_pred HHHH---HHCCeeeccCcccccc-----CCEEEecccC
Confidence 4445 8899999999999986 2489999965
No 464
>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]
Probab=97.97 E-value=1.1e-06 Score=89.38 Aligned_cols=187 Identities=18% Similarity=0.134 Sum_probs=130.8
Q ss_pred ccccccccccccceeEEEEEecCCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCCCC-ccccc
Q 011360 193 CFASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQIRHRN-ILPLL 271 (487)
Q Consensus 193 ~~~~~~~lg~G~~g~v~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpn-Iv~l~ 271 (487)
.+.....+++|+++++++.+. ..+ +....+.+.. .....-++++|.+++||| .+..+
T Consensus 243 ws~~fh~fvK~altknpKkRp-tae-klL~h~fvs~--------------------~l~~rl~~eLLdK~n~P~~~v~~~ 300 (829)
T KOG0576|consen 243 WSEFFHNFVKGALTKNPKKRP-TAE-KLLQHPFVSQ--------------------TLSRRLAIELLDKVNNPNPVVRYL 300 (829)
T ss_pred chHHHHHHHHHHhcCCCccCC-Chh-hheeceeecc--------------------chhhHHHHHHHHHccCCCCccccc
Confidence 345566789999999998853 222 2222443311 023345778899999999 77777
Q ss_pred eEEecCCeeEEEEEecCCC-CHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCC
Q 011360 272 AHMVRPDCHLLVYEFMKNG-SLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVLLNDDME 350 (487)
Q Consensus 272 ~~~~~~~~~~lv~E~~~~g-sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nill~~~~~ 350 (487)
+-+..++...+.|+++.++ +-..... .....+...+...+.+.-+.+++++ |+.--+|+| ||+..+ +.
T Consensus 301 ~d~~~E~~~~i~~~i~s~~rs~~~~~~---~se~~~~~~~~~~~~r~et~~l~~l---~~~~~~~~d----~~l~s~-~~ 369 (829)
T KOG0576|consen 301 EDYDGEDYLWIPMRICSTGRSSALEMT---VSEIALEQYQFAYPLRKETRPLAEL---HSSYKVHRD----NILGSE-EE 369 (829)
T ss_pred ccCCcccccchhhhhhcCCccccccCC---hhhHhhhhhhhhhhhhhhccccccc---ccccccCcc----cccccc-cc
Confidence 7777788889999999776 2222111 1112233334455666777888888 554458888 777665 57
Q ss_pred EEEeccCCccccCCCCceeeEeeecccccccCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCcc
Q 011360 351 ACISDLGLAMAIPDGYTRVLISYVLGTMAYIAPEYFQQPELSEKCDIFSFGMLLISLVRGVPSFV 415 (487)
Q Consensus 351 ~kl~DFg~s~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DvwslG~~l~elltg~~pf~ 415 (487)
.+.+||+....+..... .....+|+.|+|||+.....+....|+|++|.-..++.-|.+|-.
T Consensus 370 ~~~~~~~v~~~L~~~~~---~~t~~~~~~~~~pev~~~~~~~~~p~~~~~~~~~~~~ap~~pPr~ 431 (829)
T KOG0576|consen 370 VKLLDFAVPPQLTRTMK---PRTAIGTPEPLAPEVIQENTIDGCPDSGSLAVSAIQMAPGLPPRS 431 (829)
T ss_pred cccccccCCcccCcccc---cccCCCCCCCCCchhhcccccccCCCccCCCcchhhcCCCCCCCC
Confidence 99999999887766542 245679999999999999999999999999987778888876653
No 465
>cd05150 APH Aminoglycoside 3'-phosphotransferase (APH). The APH subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). APH catalyzes the transfer of the gamma-phosphoryl group from ATP to aminoglycoside antibiotics such as kanamycin, streptomycin, neomycin, and gentamicin, among others. The aminoglycoside antibiotics target the 30S ribosome and promote miscoding, leading to the production of defective proteins which insert into the bacterial membrane, resulting in membrane damage and the ultimate demise of the bacterium. Phosphorylation of the aminoglycoside antibiotics results in their inactivation, leading to bacterial antibiotic resistance. The APH gene is found on transposons and plasmids and is thought to have originated as a self-defense mechanism used by microorganisms that produce the antibio
Probab=97.96 E-value=8.1e-05 Score=69.98 Aligned_cols=140 Identities=11% Similarity=0.068 Sum_probs=78.5
Q ss_pred cccccc-eeEEEEEecCCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccC-CCCCccccceEEecC
Q 011360 200 IGSGGC-GEVYKAELPGSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQI-RHRNILPLLAHMVRP 277 (487)
Q Consensus 200 lg~G~~-g~v~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpnIv~l~~~~~~~ 277 (487)
|-.|.+ ..||+... ++..+.+|...... ...+..|+.++..+ .+--+.+++++....
T Consensus 6 ~~~g~~~~~v~~~~~---~~~~~~vk~~~~~~------------------~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~ 64 (244)
T cd05150 6 VTEGQSGATVYRLDG---KNPGLYLKIAPSGP------------------TYELEREAERLRWLAGKLPVPEVIDYGSDD 64 (244)
T ss_pred cCCCCCcCeEEEEcC---CCCcEEEEecCCCc------------------ccchHHHHHHHHHHHhcCCCCeEEEEEecC
Confidence 444555 77888853 34578888652110 12345577776666 233455667766666
Q ss_pred CeeEEEEEecCCCCHHHHHh----------------hh-hc--CCCCCChH--HHHHH-HH-------------------
Q 011360 278 DCHLLVYEFMKNGSLQDILD----------------DV-SR--GRRELDWP--SRHRI-AL------------------- 316 (487)
Q Consensus 278 ~~~~lv~E~~~~gsL~~~l~----------------~~-~~--~~~~l~~~--~~~~i-~~------------------- 316 (487)
+..++|||+++|.+|..... .. .. ...++... ..... ..
T Consensus 65 ~~~~lv~e~i~G~~l~~~~~~~~~~~~~~~l~~~l~~lH~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 144 (244)
T cd05150 65 GRAWLLTSAVPGVPAAALWEELEPERLVDALAEALRRLHALPVADCPFDRRLDRRLAEARARVENGLVDEDDFDDERRGW 144 (244)
T ss_pred CccEEEEEeeCCccHhHhhcccCHHHHHHHHHHHHHHHhcCCcccCCcchhHHHHHHHHHHHHhcCCcChhhCcHhhcCC
Confidence 67889999999988764321 00 00 01111100 00000 00
Q ss_pred HHHHHHHHHHh----cCCCCeeecCCCCCCEEeCCCCCEEEeccCCcc
Q 011360 317 GVASGLEYLHM----YHSASIIHGDIKPRNVLLNDDMEACISDLGLAM 360 (487)
Q Consensus 317 qi~~~L~~Lh~----~h~~givH~Dlkp~Nill~~~~~~kl~DFg~s~ 360 (487)
.+...+..|-. .....++|+|+.|.||++++++.+.|+||+.+.
T Consensus 145 ~~~~~~~~l~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~iIDwe~a~ 192 (244)
T cd05150 145 SAEELYAELEATRPAEEDLVVTHGDACLPNIIVDPGKFSGFIDLGRLG 192 (244)
T ss_pred CHHHHHHHHHhhCCCcCceEEECCCCCCccEEEeCCcEEEEEEccccc
Confidence 01111222211 134569999999999999998778899998763
No 466
>COG2112 Predicted Ser/Thr protein kinase [Signal transduction mechanisms]
Probab=97.94 E-value=3.6e-05 Score=66.54 Aligned_cols=130 Identities=22% Similarity=0.257 Sum_probs=88.2
Q ss_pred cccccccccccceeEEEEEecCCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCCCCccc-cce
Q 011360 194 FASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQIRHRNILP-LLA 272 (487)
Q Consensus 194 ~~~~~~lg~G~~g~v~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~-l~~ 272 (487)
..+...||+|++|.||+|.| .|..+|+|+-. .++....+..|++++..+.-.++-+ +|.
T Consensus 24 ~~v~~~L~KG~~s~Vyl~~~---~~~~~a~Kvrr-----------------~ds~r~~l~kEakiLeil~g~~~~p~vy~ 83 (201)
T COG2112 24 LRVEKELAKGTTSVVYLGEW---RGGEVALKVRR-----------------RDSPRRNLEKEAKILEILAGEGVTPEVYF 83 (201)
T ss_pred hhhhhhhhcccccEEEEeec---cCceEEEEEec-----------------CCcchhhHHHHHHHHHHhhhcCCCceEEE
Confidence 45667899999999999988 56689999753 2334567788999988887666543 333
Q ss_pred EEecCCeeEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCC-CCCEEeCCCCCE
Q 011360 273 HMVRPDCHLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIK-PRNVLLNDDMEA 351 (487)
Q Consensus 273 ~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlk-p~Nill~~~~~~ 351 (487)
+. ..++.|||+.|-+|.+.-.. .+..+ ...+++.-.-| ...||-|+.|. |...++..++.+
T Consensus 84 yg----~~~i~me~i~G~~L~~~~~~-------~~rk~----l~~vlE~a~~L---D~~GI~H~El~~~~k~vlv~~~~~ 145 (201)
T COG2112 84 YG----EDFIRMEYIDGRPLGKLEIG-------GDRKH----LLRVLEKAYKL---DRLGIEHGELSRPWKNVLVNDRDV 145 (201)
T ss_pred ec----hhhhhhhhhcCcchhhhhhc-------ccHHH----HHHHHHHHHHH---HHhccchhhhcCCceeEEecCCcE
Confidence 32 22466999999888776542 12222 23344443344 66789999886 444555555589
Q ss_pred EEeccCCccc
Q 011360 352 CISDLGLAMA 361 (487)
Q Consensus 352 kl~DFg~s~~ 361 (487)
.|+||..++.
T Consensus 146 ~iIDFd~At~ 155 (201)
T COG2112 146 YIIDFDSATF 155 (201)
T ss_pred EEEEccchhh
Confidence 9999998863
No 467
>PF12260 PIP49_C: Protein-kinase domain of FAM69; InterPro: IPR022049 Family with sequence similarity 69 has three members (A, B and C). Proteins in this uncharacterised family are described as transmembrane proteins.
Probab=97.88 E-value=4.8e-05 Score=68.14 Aligned_cols=104 Identities=24% Similarity=0.246 Sum_probs=79.6
Q ss_pred HHHHHhccCCC-CCccccceEEecCCeeEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCC
Q 011360 254 SEIITASQIRH-RNILPLLAHMVRPDCHLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSAS 332 (487)
Q Consensus 254 ~E~~~l~~l~h-pnIv~l~~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~g 332 (487)
.|.-++..+.+ +++.+++|+|- .+++.||...+++...-... ..-...+|..+.+++.+++..+.++++.....
T Consensus 8 ~E~lll~~l~~~~~~pk~lG~CG----~~~v~E~~~~~~~~~~~~~l-~~~~~~~w~~R~~iA~~lL~~l~~l~~~~~~~ 82 (188)
T PF12260_consen 8 NEPLLLQLLQGSEPFPKLLGSCG----RFYVVEYVGAGSLYGIYRPL-SQFLQSPWEQRAKIALQLLELLEELDHGPLGF 82 (188)
T ss_pred cHHHHHHHcCCCCCCCCeeeECC----CEEEEEeecCcccccccccc-ccccccCHHHHHHHHHHHHHHHHHHhcCCCCc
Confidence 46777777755 69999999883 35789999877664210000 01134689999999999999999997655556
Q ss_pred eeecCCCCCCEEeCCCCCEEEeccCCcccc
Q 011360 333 IIHGDIKPRNVLLNDDMEACISDLGLAMAI 362 (487)
Q Consensus 333 ivH~Dlkp~Nill~~~~~~kl~DFg~s~~~ 362 (487)
+.-.|++|+|+-++++|.+|++|...+...
T Consensus 83 ~~lcDv~~~nfgv~~~~~lk~iDld~v~~~ 112 (188)
T PF12260_consen 83 FYLCDVSPDNFGVNDDGRLKLIDLDDVFVE 112 (188)
T ss_pred EEEeecchHHeEEeCCCcEEEEechhcchh
Confidence 888999999999999999999999876543
No 468
>PLN02876 acyl-CoA dehydrogenase
Probab=97.81 E-value=0.00018 Score=79.69 Aligned_cols=82 Identities=10% Similarity=0.167 Sum_probs=53.2
Q ss_pred ccccccccceeEEEEEecCCC-CceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCC-CCCc--cccce
Q 011360 197 LEKIGSGGCGEVYKAELPGSN-GKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQIR-HRNI--LPLLA 272 (487)
Q Consensus 197 ~~~lg~G~~g~v~~~~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-hpnI--v~l~~ 272 (487)
+..++.|.++.+|+....... ...+++|+..... .......+.+|+.+++.+. |+++ .+++.
T Consensus 43 v~~l~gG~sn~ty~l~~~~~~~~~~~VLR~~p~~~--------------~~~~~~~~~rE~~~l~~L~~~~~vpVP~v~~ 108 (822)
T PLN02876 43 VSQFGHGQSNPTFLLEVGNGGSVKRYVLRKKPPGK--------------LLQSAHAVEREYQVLRALGEHTDVPVPKVYC 108 (822)
T ss_pred EEEeCCCCcCceEEEEECCCCcceeEEEEeCCCCc--------------cCccHHHHHHHHHHHHHHhhcCCCCCCcEEE
Confidence 567899999999998764211 1467777642110 0011235678888888884 6665 66777
Q ss_pred EEecC---CeeEEEEEecCCCCH
Q 011360 273 HMVRP---DCHLLVYEFMKNGSL 292 (487)
Q Consensus 273 ~~~~~---~~~~lv~E~~~~gsL 292 (487)
++.+. +..|+||||++|..+
T Consensus 109 ~~~d~~v~G~~flVME~v~G~~~ 131 (822)
T PLN02876 109 LCTDASVIGTAFYIMEYLEGRIF 131 (822)
T ss_pred EecCCCcCCCceEEEEecCCccc
Confidence 66654 457899999988643
No 469
>PF10707 YrbL-PhoP_reg: PhoP regulatory network protein YrbL; InterPro: IPR019647 This entry represents proteins that are activated by the protein PhoP. PhoP controls the expression of a large number of genes that mediate adaptation to low Mg2+ environments and/or virulence in several bacterial species. YbrL is proposed to be acting in a loop activity with PhoP and PrmA analogous to the multi-component loop in Salmonella sp., where the PhoP-dependent PmrD protein activates the regulatory protein PmrA, and the activated PmrA then represses transcription from the PmrD promoter which harbours binding sites for both the PhoP and PmrA proteins. Expression of YrbL is induced in low Mg2+ in a PhoP-dependent fashion and repressed by Fe3+ in a PmrA-dependent manner [].
Probab=97.80 E-value=0.00048 Score=62.08 Aligned_cols=144 Identities=20% Similarity=0.242 Sum_probs=88.6
Q ss_pred ccccccccceeEEEEEecCCCCceEEEEEeeecCchhHH---HHHHHhhhhhhHHHHHHHHHHHHhccC------CCCCc
Q 011360 197 LEKIGSGGCGEVYKAELPGSNGKMIAIKKVIVYAPISAA---ELIEEDSKLRDSKLRQIRSEIITASQI------RHRNI 267 (487)
Q Consensus 197 ~~~lg~G~~g~v~~~~~~~~~~~~vavK~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~E~~~l~~l------~hpnI 267 (487)
...||.|+.-.||.- ..+...+||+.......... ..++ ........++..+|+.-...+ .+.+|
T Consensus 6 ~~~i~~G~~R~cy~H----P~dp~~cIKV~~~~~~~~~~~~~~~~k--~~~~~~~~~~~~~E~~~y~~l~~~~~~~~~~i 79 (199)
T PF10707_consen 6 SDLIAQGGERDCYQH----PDDPNLCIKVMRPDRGERRRPFKRWLK--RLRPKSRYRQNRRELRYYKQLSLRRGVDWSHI 79 (199)
T ss_pred CcccccCCCceEEEC----CCCCCeEEEEEccccccccccchhHHH--hhcccchhHHHHHHHHHHHHHhhccCCccccc
Confidence 457999999999854 24556788887554411000 0010 001112344555555544444 48899
Q ss_pred cccceEEecCCeeEEEEEecCC------CCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCC
Q 011360 268 LPLLAHMVRPDCHLLVYEFMKN------GSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPR 341 (487)
Q Consensus 268 v~l~~~~~~~~~~~lv~E~~~~------gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~ 341 (487)
.+++|+..++...-+|+|.+.+ -+|.+++.. ..++. .....+.++ ..|| -+.+|+.+|++|.
T Consensus 80 ~r~~G~veT~~G~Glv~e~I~d~dG~~s~TL~~~l~~-----~~~~~-~~~~~L~~f---~~~l---~~~~Iv~~dl~~~ 147 (199)
T PF10707_consen 80 PRFYGFVETNLGLGLVVELIRDADGNISPTLEDYLKE-----GGLTE-ELRQALDEF---KRYL---LDHHIVIRDLNPH 147 (199)
T ss_pred ccEeEEEecCCceEEEEEEEECCCCCcCccHHHHHHc-----CCccH-HHHHHHHHH---HHHH---HHcCCeecCCCcc
Confidence 9999999999989999998732 357777642 34544 333344433 4455 3445999999999
Q ss_pred CEEeCCC--C--CEEEec-cCC
Q 011360 342 NVLLNDD--M--EACISD-LGL 358 (487)
Q Consensus 342 Nill~~~--~--~~kl~D-Fg~ 358 (487)
||++..+ + .+.|+| ||.
T Consensus 148 NIv~~~~~~~~~~lvlIDG~G~ 169 (199)
T PF10707_consen 148 NIVVQRRDSGEFRLVLIDGLGE 169 (199)
T ss_pred cEEEEecCCCceEEEEEeCCCC
Confidence 9999643 2 477777 454
No 470
>cd05155 APH_ChoK_like_1 Uncharacterized bacterial proteins with similarity to Aminoglycoside 3'-phosphotransferase (APH) and Choline kinase (ChoK) family members. The APH/ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates, such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides, and macrolides leads to their inactivation and to bacterial antibiotic resista
Probab=97.66 E-value=0.00026 Score=66.16 Aligned_cols=32 Identities=28% Similarity=0.482 Sum_probs=26.4
Q ss_pred CCCCeeecCCCCCCEEeCCCCCEEEeccCCcc
Q 011360 329 HSASIIHGDIKPRNVLLNDDMEACISDLGLAM 360 (487)
Q Consensus 329 h~~givH~Dlkp~Nill~~~~~~kl~DFg~s~ 360 (487)
...+++|+|+.|.||++++++..-|+||+.+.
T Consensus 162 ~~~~l~HGD~~~~Nvlv~~~~i~giIDw~~a~ 193 (235)
T cd05155 162 GPPVWFHGDLAPGNLLVQDGRLSAVIDFGCLG 193 (235)
T ss_pred CCceEEeCCCCCCcEEEECCCEEEEEeCcccC
Confidence 34569999999999999876556799999764
No 471
>PRK10593 hypothetical protein; Provisional
Probab=97.37 E-value=0.0024 Score=61.85 Aligned_cols=79 Identities=14% Similarity=0.083 Sum_probs=51.9
Q ss_pred cccccccccccceeEEEEEecCCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCC---CCcccc
Q 011360 194 FASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQIRH---RNILPL 270 (487)
Q Consensus 194 ~~~~~~lg~G~~g~v~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h---pnIv~l 270 (487)
..-.+.||.|..+.||..... ++ .+.+|.... ......+..|+..++.+.. -.+.++
T Consensus 16 ~~~~~~i~~G~~~~vy~~~~~--~~-~~~~k~~~~-----------------~~~~~~~~~Ea~~L~~L~~~~~vpVP~V 75 (297)
T PRK10593 16 LSRVECISEQPYAALWALYDS--QG-NPMPLMARS-----------------FSTPGVAQQEAWKLSMLARSGTVRMPTV 75 (297)
T ss_pred hheeeecCCccceeEEEEEcC--CC-CEEEEEecc-----------------cccchHHHHHHHHHHHHccCCCCCcCcE
Confidence 444567999999999998532 33 466665411 0012356677777776632 356777
Q ss_pred ceEEec---CCeeEEEEEecCCCCH
Q 011360 271 LAHMVR---PDCHLLVYEFMKNGSL 292 (487)
Q Consensus 271 ~~~~~~---~~~~~lv~E~~~~gsL 292 (487)
++++.. .+..++|||+++|+++
T Consensus 76 ~~~~~~~~~~g~~~LVmE~i~G~~~ 100 (297)
T PRK10593 76 YGVMTHEQSPGPDVLLLERLRGVSV 100 (297)
T ss_pred EEEeccCCcCCCeEEEEeccCCEec
Confidence 776653 3668999999998765
No 472
>KOG1826 consensus Ras GTPase activating protein RasGAP/neurofibromin [Defense mechanisms]
Probab=97.33 E-value=7.8e-05 Score=83.00 Aligned_cols=161 Identities=12% Similarity=0.052 Sum_probs=114.8
Q ss_pred HHHHHHHhccCCCCCccccceEEec--CCeeEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcC
Q 011360 252 IRSEIITASQIRHRNILPLLAHMVR--PDCHLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYH 329 (487)
Q Consensus 252 ~~~E~~~l~~l~hpnIv~l~~~~~~--~~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h 329 (487)
...|..-.+...|+++...+.-... ....+.+++|+.+|.+.+.+-+.......+...-+.....+.+....-+|...
T Consensus 1276 ll~e~de~~~~~h~~~~~~p~rI~ps~s~ee~~r~~~~~~g~~f~iIikg~ee~~~ld~~~v~~~~kvsvl~~~~~ls~t 1355 (2724)
T KOG1826|consen 1276 LLSERDELREAKHYLTEVDPLRIPPSESTEEYIRSLYVEFGKLFSIIIKGLEESPDLDRSPVHLRHKVSVLNRNVILSLT 1355 (2724)
T ss_pred hhhhhhhhhhhhceeeecccccCCCCCChHHHHHHHHHHHhHHHHHHHhccccCCcchhchHHHHHHHHHhccchhhhcc
Confidence 3445555566789988877764443 34558999999999999998764333344444434333333344444443322
Q ss_pred C--CCeeecCCCCCCEEeCCCCCEEEeccCCccccCCCCceeeEeeecccccccCCcccCCCCCCchhHHHHHHHHHHHH
Q 011360 330 S--ASIIHGDIKPRNVLLNDDMEACISDLGLAMAIPDGYTRVLISYVLGTMAYIAPEYFQQPELSEKCDIFSFGMLLISL 407 (487)
Q Consensus 330 ~--~givH~Dlkp~Nill~~~~~~kl~DFg~s~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DvwslG~~l~el 407 (487)
+ +-.+|+++|+.|.++..+..+|++++|+.+...+.. ...+...+++-|++|++...-.++.++|+|..|+.+|+.
T Consensus 1356 nlg~T~v~~~Lkf~lpmIVtny~v~~gk~gLdKIknp~~--sf~Gl~l~sp~~v~qli~N~ik~t~rsdilr~s~~ly~r 1433 (2724)
T KOG1826|consen 1356 NLGNTNVSKSLKFTLPMIVTNYNVKLGKGGLDKIKNPVL--SFFGLELCSPIYVLQLIKNEIKFTKRSDILRRSLSLYLR 1433 (2724)
T ss_pred cCCccchhhhhhhhccceecCCcccccccccccccCchH--hhhhhhhCCHHHHHHHHHHHHhhhhHHHHHHHHHHHHHH
Confidence 2 237899999999999999999999999998332221 112445678899999998888889899999999999999
Q ss_pred HhCCCCc
Q 011360 408 VRGVPSF 414 (487)
Q Consensus 408 ltg~~pf 414 (487)
.-|.++|
T Consensus 1434 s~~n~~f 1440 (2724)
T KOG1826|consen 1434 SDGNAYF 1440 (2724)
T ss_pred hcccHHH
Confidence 9999888
No 473
>cd05157 ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes. ETNK is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major phospholipid, phosphatidylethanolamine (PtdEtn). Unlike ChoK, ETNK shows specific activity for its substrate, and displays negligible activity towards N-methylated derivatives of Etn. The Drosophila ETNK is implicated in development and neuronal function. Mammals contain two ETNK proteins, ETNK1 and ETNK2. ETNK1 selectively increases Etn uptake and phosphorylation, as well as PtdEtn synthesis. ETNK2 is found primarily in the liver and reproductive tissues. It plays a critical role in regulating placental hemostasis to support late embryo
Probab=97.32 E-value=0.004 Score=57.97 Aligned_cols=32 Identities=19% Similarity=0.226 Sum_probs=27.5
Q ss_pred CCCeeecCCCCCCEEeCC-CCCEEEeccCCccc
Q 011360 330 SASIIHGDIKPRNVLLND-DMEACISDLGLAMA 361 (487)
Q Consensus 330 ~~givH~Dlkp~Nill~~-~~~~kl~DFg~s~~ 361 (487)
..+++|+|+.+.||++++ ++.+.++||..+..
T Consensus 169 ~~~l~H~Dl~~~Nil~~~~~~~~~lIDwe~a~~ 201 (235)
T cd05157 169 PIVFCHNDLLSGNIIYNEEKNSVKFIDYEYAGY 201 (235)
T ss_pred CEEEEcCCCCcCcEEEeCCCCCEEEEEcccCCc
Confidence 457999999999999998 57899999987743
No 474
>PRK09550 mtnK methylthioribose kinase; Reviewed
Probab=97.32 E-value=0.0027 Score=63.54 Aligned_cols=82 Identities=16% Similarity=0.206 Sum_probs=49.4
Q ss_pred cccccccceeEEEEEecCCCC-ceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccC---CCCCccccceE
Q 011360 198 EKIGSGGCGEVYKAELPGSNG-KMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQI---RHRNILPLLAH 273 (487)
Q Consensus 198 ~~lg~G~~g~v~~~~~~~~~~-~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l---~hpnIv~l~~~ 273 (487)
+.||.|.++.||++... +| +.++||.-....... ...-+....+...|...|..+ ...++.+++.+
T Consensus 32 ~elggGn~N~VyrV~~~--~g~~svIVKqa~p~~r~~--------g~~wpl~~eR~~~Eae~L~~l~~~~p~~VPkV~~~ 101 (401)
T PRK09550 32 REIGDGNLNLVFRVSDT--EGGKSVIVKQALPYVRVV--------GESWPLTLDRARIEAEALKIQAKYVPDLVPKVYHY 101 (401)
T ss_pred eEcCCCceEEEEEEEeC--CCCeEEEEEecCcccccc--------cccccccHHHHHHHHHHHHHHHhhCCCCCCeEEEE
Confidence 57899999999999753 44 589999742110000 000012334555666666665 22456666665
Q ss_pred EecCCeeEEEEEecCCCC
Q 011360 274 MVRPDCHLLVYEFMKNGS 291 (487)
Q Consensus 274 ~~~~~~~~lv~E~~~~gs 291 (487)
+++..++||||+++..
T Consensus 102 --D~~~~~lVME~L~~~~ 117 (401)
T PRK09550 102 --DEELAVTVMEDLSDHK 117 (401)
T ss_pred --CCCCCEEEEecCCCcc
Confidence 4466789999997643
No 475
>KOG2268 consensus Serine/threonine protein kinase [Signal transduction mechanisms; General function prediction only]
Probab=97.28 E-value=0.00033 Score=66.41 Aligned_cols=150 Identities=15% Similarity=0.156 Sum_probs=94.8
Q ss_pred ccccccccccccceeEEEEEecCCCCceEEEEEeeecCchhHHHHHHHh------hhhhhHH--HHHHHHHHHHhccCC-
Q 011360 193 CFASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIVYAPISAAELIEED------SKLRDSK--LRQIRSEIITASQIR- 263 (487)
Q Consensus 193 ~~~~~~~lg~G~~g~v~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~------~~~~~~~--~~~~~~E~~~l~~l~- 263 (487)
-+.+.+.||-|--+.+|.+.. ..|.+.++|.-..++. +...+..+. ....-.. .-...+|...|..|.
T Consensus 93 v~svGnqIGVGKESDIY~v~d--~~G~~~~lK~HRLGRt-SFR~Vk~kRDY~r~r~~~sWlyLSRlaa~kEfafmkaL~e 169 (465)
T KOG2268|consen 93 VESVGNQIGVGKESDIYVVAD--EEGNPLILKLHRLGRT-SFRNVKNKRDYLRKRKSGSWLYLSRLAATKEFAFMKALYE 169 (465)
T ss_pred hhhhccccccccccceEEEec--CCCCchhHHHHhhhhh-hHHHhhhhhhhHhcCCccchhhhHHHHHHHHHHHHHHHHH
Confidence 367788999999999999964 3788999986544332 222111111 1111111 123467787777773
Q ss_pred C-CCccccceEEecCCeeEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCC
Q 011360 264 H-RNILPLLAHMVRPDCHLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRN 342 (487)
Q Consensus 264 h-pnIv~l~~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~N 342 (487)
| --+.+.++ .+..++|||++.|-+|...-. .....+ +...+...+--| -.+|+||||..-=|
T Consensus 170 ~gfpVPkpiD----~~RH~Vvmelv~g~Pl~~v~~-------v~d~~~---ly~~lm~~Iv~l---a~~GlIHgDFNEFN 232 (465)
T KOG2268|consen 170 RGFPVPKPID----HNRHCVVMELVDGYPLRQVRH-------VEDPPT---LYDDLMGLIVRL---ANHGLIHGDFNEFN 232 (465)
T ss_pred cCCCCCCccc----ccceeeHHHhhcccceeeeee-------cCChHH---HHHHHHHHHHHH---HHcCceecccchhe
Confidence 2 22333333 245679999999988765421 122222 333344444455 67899999999999
Q ss_pred EEeCCCCCEEEeccCCcccc
Q 011360 343 VLLNDDMEACISDLGLAMAI 362 (487)
Q Consensus 343 ill~~~~~~kl~DFg~s~~~ 362 (487)
|++.+++.++++||--....
T Consensus 233 imv~dd~~i~vIDFPQmvS~ 252 (465)
T KOG2268|consen 233 IMVKDDDKIVVIDFPQMVST 252 (465)
T ss_pred eEEecCCCEEEeechHhhcc
Confidence 99999999999999765443
No 476
>TIGR00938 thrB_alt homoserine kinase, Neisseria type. Homoserine kinase is required in the biosynthesis of threonine from aspartate.The member of this family from Pseudomonas aeruginosa was shown by direct assay and complementation to act specifically as a homoserine kinase.
Probab=97.22 E-value=0.0033 Score=61.29 Aligned_cols=33 Identities=30% Similarity=0.466 Sum_probs=28.5
Q ss_pred CCCCeeecCCCCCCEEeCCCCCEEEeccCCccc
Q 011360 329 HSASIIHGDIKPRNVLLNDDMEACISDLGLAMA 361 (487)
Q Consensus 329 h~~givH~Dlkp~Nill~~~~~~kl~DFg~s~~ 361 (487)
...+++|+|+.+.|+++++++.+.|+||+.+..
T Consensus 185 ~~~~l~HgD~~~~Nvl~~~~~~~~vIDfd~~~~ 217 (307)
T TIGR00938 185 LPRGVIHADLFPDNVLFDGDSVKGVIDFYFACT 217 (307)
T ss_pred CCCccCCCCCCcCcEEEECCceEEEeecccccC
Confidence 357899999999999999887778999998743
No 477
>cd05153 HomoserineK_II Homoserine Kinase, type II. Homoserine kinase is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of unusual homoserine kinases, from a subset of bacteria, which have a PK fold. These proteins do not bear any similarity to the GHMP family homoserine kinases present in most bacteria and eukaryotes. Homoserine kinase catalyzes the transfer of the gamma-phosphoryl group from ATP to L-homoserine producing L-homoserine phosphate, an intermediate in the production of the amino acids threonine, methionine, and isoleucine.
Probab=97.19 E-value=0.0015 Score=63.26 Aligned_cols=32 Identities=28% Similarity=0.412 Sum_probs=27.6
Q ss_pred CCCeeecCCCCCCEEeCCCCCEEEeccCCccc
Q 011360 330 SASIIHGDIKPRNVLLNDDMEACISDLGLAMA 361 (487)
Q Consensus 330 ~~givH~Dlkp~Nill~~~~~~kl~DFg~s~~ 361 (487)
..+++|+|+.|.|+++++++.+.|.||+.+..
T Consensus 174 ~~~l~HgD~~~~Nil~~~~~~~~iIDfe~a~~ 205 (296)
T cd05153 174 PRGVIHADLFRDNVLFDGDELSGVIDFYFACT 205 (296)
T ss_pred CCcCCccCcCcccEEEeCCceEEEeehhhhcC
Confidence 35799999999999999887778999998753
No 478
>TIGR02721 ycfN_thiK thiamine kinase. Members of this family are the ycfN gene product of Escherichia coli, now identified as the salvage enzyme thiamine kinase (thiK), and additional proteobacterial homologs taken to be orthologs with equivalent function.
Probab=97.09 E-value=0.0041 Score=58.85 Aligned_cols=30 Identities=17% Similarity=0.189 Sum_probs=26.1
Q ss_pred CCeeecCCCCCCEEeCCCCCEEEeccCCccc
Q 011360 331 ASIIHGDIKPRNVLLNDDMEACISDLGLAMA 361 (487)
Q Consensus 331 ~givH~Dlkp~Nill~~~~~~kl~DFg~s~~ 361 (487)
..++|+|+.|.||++++++ +.|+||..+..
T Consensus 146 ~~l~H~Dl~~~Nil~~~~~-~~lIDwE~a~~ 175 (256)
T TIGR02721 146 LAPLHMDVHAYNLVVTPQG-LKLIDWEYASD 175 (256)
T ss_pred CeeecCCCCcCcEEEeCCC-CEEEeccccCc
Confidence 4589999999999999877 78999998754
No 479
>PRK05231 homoserine kinase; Provisional
Probab=97.08 E-value=0.014 Score=57.26 Aligned_cols=32 Identities=28% Similarity=0.370 Sum_probs=27.1
Q ss_pred CCCeeecCCCCCCEEeCCCCCEEEeccCCccc
Q 011360 330 SASIIHGDIKPRNVLLNDDMEACISDLGLAMA 361 (487)
Q Consensus 330 ~~givH~Dlkp~Nill~~~~~~kl~DFg~s~~ 361 (487)
..|+||+|+.|.||+++++...-|+||+.+..
T Consensus 186 p~~liHgD~~~~Nil~~~~~~~~iIDf~~~~~ 217 (319)
T PRK05231 186 PRGVIHADLFRDNVLFEGDRLSGFIDFYFACN 217 (319)
T ss_pred CcccCCCCCCCCcEEEECCceEEEEecccccC
Confidence 45899999999999999765568999998754
No 480
>cd05156 ChoK_euk Choline Kinase (ChoK) in eukaryotes. The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC) and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. ChoK plays an important role in cell signaling pathways and the regulation of cell growth. Along with PCho, it is involved in malignant transformation through Ras oncogenes in various human cancer
Probab=96.64 E-value=0.014 Score=56.65 Aligned_cols=31 Identities=23% Similarity=0.358 Sum_probs=27.2
Q ss_pred CCCeeecCCCCCCEEeCCC----CCEEEeccCCcc
Q 011360 330 SASIIHGDIKPRNVLLNDD----MEACISDLGLAM 360 (487)
Q Consensus 330 ~~givH~Dlkp~Nill~~~----~~~kl~DFg~s~ 360 (487)
..+++|+|+.|.||+++++ +.+.++||..+.
T Consensus 178 ~~~lcH~Dl~~~Nil~~~~~~~~~~i~lIDwEya~ 212 (302)
T cd05156 178 PVVFCHNDLQEGNILLLNPSSETKKLVLIDFEYAS 212 (302)
T ss_pred CceEEecCCCcCeEEecCCCCCCCcEEEEeeCCCC
Confidence 4569999999999999985 789999999874
No 481
>TIGR01767 MTRK 5-methylthioribose kinase. This enzyme is involved in the methionine salvage pathway in certain bacteria.
Probab=96.60 E-value=0.02 Score=56.24 Aligned_cols=34 Identities=18% Similarity=0.447 Sum_probs=27.6
Q ss_pred CCCCeeecCCCCCCEEeCCCCCEEEeccCCccccC
Q 011360 329 HSASIIHGDIKPRNVLLNDDMEACISDLGLAMAIP 363 (487)
Q Consensus 329 h~~givH~Dlkp~Nill~~~~~~kl~DFg~s~~~~ 363 (487)
+...++|||+.+.||++++++ ++++||..+..-+
T Consensus 190 ~~~~llHGDl~~gNi~~~~~~-~~~iD~e~~~~G~ 223 (370)
T TIGR01767 190 SAETLLHGDLHSGSIFVSEHE-TKVIDPEFAFYGP 223 (370)
T ss_pred CcceeeeccCCcccEEEcCCC-CEEEcCcccccCc
Confidence 456699999999999998764 7899998776543
No 482
>KOG2270 consensus Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning]
Probab=96.20 E-value=0.049 Score=53.05 Aligned_cols=160 Identities=17% Similarity=0.150 Sum_probs=92.9
Q ss_pred ccccccccccceeEEEEEecCCCCceEEEEEeeecCchh-HHH-HH-------HHhhh--hhhHHHHHHHHHHHHhccCC
Q 011360 195 ASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIVYAPIS-AAE-LI-------EEDSK--LRDSKLRQIRSEIITASQIR 263 (487)
Q Consensus 195 ~~~~~lg~G~~g~v~~~~~~~~~~~~vavK~~~~~~~~~-~~~-~~-------~~~~~--~~~~~~~~~~~E~~~l~~l~ 263 (487)
.+..+|..|--..||.+.- .+|..+|||++.-.--.. ..+ .. ..... .+....-=...|+..|.++.
T Consensus 147 ~inGCiSTGKEANVYHat~--~dG~~~AIKIYKTSILvFKDRdRYV~GEfRFRhgyck~NPRKMVk~WAEKE~RNLkRl~ 224 (520)
T KOG2270|consen 147 EINGCISTGKEANVYHATE--EDGSEFAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKHNPRKMVKTWAEKEMRNLKRLN 224 (520)
T ss_pred ecccccccCccceeEeeec--CCCceEEEEEEeeeEEEEechhhhccceeeeecccccCCcHHHHHHHHHHHHHHHHHHH
Confidence 4556778888899999963 488889999874321000 000 00 00000 11111111245666666665
Q ss_pred CCCccccceEEecCCeeEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCE
Q 011360 264 HRNILPLLAHMVRPDCHLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNV 343 (487)
Q Consensus 264 hpnIv~l~~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Ni 343 (487)
...|...--+.. ....|||+|+. ++=+- .-....-.++...+..+-.+++..+.-|- +..++||.||.-=|+
T Consensus 225 ~aGIP~PePIlL--k~hVLVM~FlG-rdgw~---aPkLKd~~ls~~ka~~~Y~~~v~~MR~lY--~~c~LVHADLSEfN~ 296 (520)
T KOG2270|consen 225 NAGIPCPEPILL--KNHVLVMEFLG-RDGWA---APKLKDASLSTSKARELYQQCVRIMRRLY--QKCRLVHADLSEFNL 296 (520)
T ss_pred hcCCCCCCceee--ecceEeeeecc-CCCCc---CcccccccCChHHHHHHHHHHHHHHHHHH--HHhceeccchhhhhh
Confidence 444332222211 22469999994 22110 00011344666677778888888777775 556699999999999
Q ss_pred EeCCCCCEEEeccCCccccCCC
Q 011360 344 LLNDDMEACISDLGLAMAIPDG 365 (487)
Q Consensus 344 ll~~~~~~kl~DFg~s~~~~~~ 365 (487)
|+. +|.+.++|-+-|......
T Consensus 297 Lyh-dG~lyiIDVSQSVE~DHP 317 (520)
T KOG2270|consen 297 LYH-DGKLYIIDVSQSVEHDHP 317 (520)
T ss_pred eEE-CCEEEEEEccccccCCCh
Confidence 998 458999999988765443
No 483
>cd05152 MPH2' Macrolide 2'-Phosphotransferase (MPH2'). MPH2' is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). MPH2' catalyzes the transfer of the gamma-phosphoryl group from ATP to the 2'-hydroxyl of macrolide antibiotics such as erythromycin, clarithromycin, and azithromycin, among others. Macrolides penetrate the bacterial cell and bind to ribosomes, where it interrupts protein elongation, leading ultimately to the demise of the bacterium. Phosphorylation of macrolides leads to their inactivation. Based on substrate specificity and amino acid sequence, MPH2' is divided into types I and II, encoded by mphA and mphB genes, respectively. MPH2'I inactivates 14-membered ring macrolides while MPH2'II inactivates both 14- and 16-membered ring macrolides. Enzymatic inactivation of macrolides has been reported
Probab=96.18 E-value=0.045 Score=52.34 Aligned_cols=32 Identities=25% Similarity=0.561 Sum_probs=26.1
Q ss_pred CCCeeecCCCCCCEEeCCCCC-EEEeccCCccc
Q 011360 330 SASIIHGDIKPRNVLLNDDME-ACISDLGLAMA 361 (487)
Q Consensus 330 ~~givH~Dlkp~Nill~~~~~-~kl~DFg~s~~ 361 (487)
...++|+|+.|.||++++++. .-|.||+.+..
T Consensus 184 ~~~lvHGD~~~~Nilv~~~~~~~gviDWe~a~i 216 (276)
T cd05152 184 HTVLVHGDLHPGHILIDEDARVTGLIDWTEAKV 216 (276)
T ss_pred CCeeEeCCCCCCcEEEeCCCCEEEEECcHhccc
Confidence 455899999999999997555 46999998754
No 484
>COG3001 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=96.09 E-value=0.077 Score=48.35 Aligned_cols=78 Identities=17% Similarity=0.228 Sum_probs=52.1
Q ss_pred ccccccccccceeEEEEEecCCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCC---CCCccccc
Q 011360 195 ASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQIR---HRNILPLL 271 (487)
Q Consensus 195 ~~~~~lg~G~~g~v~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~---hpnIv~l~ 271 (487)
.-.+.+..|..-..|.... ...++-+|.- .......+..|+.-|..|. .-++.+++
T Consensus 19 ~er~~v~gG~inea~~v~d---g~~~~FvK~n------------------~~~~~~~f~AEa~gL~~la~s~ti~VP~vi 77 (286)
T COG3001 19 KEREEVSGGDINEAWRLRD---GTDPFFVKCN------------------QREQLSMFTAEADGLELLARSNTITVPKVI 77 (286)
T ss_pred hcccccCCccccceeEeec---CCcceEEEec------------------chhhHHHHHHHHHHHHHHHhcCCccccceE
Confidence 3345566677777776643 4456777742 2233455666776666663 34567778
Q ss_pred eEEecCCeeEEEEEecCCCCHH
Q 011360 272 AHMVRPDCHLLVYEFMKNGSLQ 293 (487)
Q Consensus 272 ~~~~~~~~~~lv~E~~~~gsL~ 293 (487)
.+....++.|+||||++.+++.
T Consensus 78 ~~G~~~~~sylVle~L~~~~~d 99 (286)
T COG3001 78 AVGASRDHSYLVLEYLPTGPLD 99 (286)
T ss_pred EecCCCCeeEEEEeeccCCCCC
Confidence 8888889999999999987766
No 485
>COG3173 Predicted aminoglycoside phosphotransferase [General function prediction only]
Probab=96.07 E-value=0.06 Score=52.12 Aligned_cols=36 Identities=22% Similarity=0.392 Sum_probs=30.5
Q ss_pred CCCCeeecCCCCCCEEeCCCCCEEEeccCCccccCC
Q 011360 329 HSASIIHGDIKPRNVLLNDDMEACISDLGLAMAIPD 364 (487)
Q Consensus 329 h~~givH~Dlkp~Nill~~~~~~kl~DFg~s~~~~~ 364 (487)
+...++|||+.+.|+++++++-+-+.||+++..-.+
T Consensus 196 ~~~~lvHGD~~~gNlii~~~~~~gVlDwe~~~lGDP 231 (321)
T COG3173 196 GPPVLVHGDYRPGNLIIDPGRPTGVLDWELATLGDP 231 (321)
T ss_pred CCceeeeCCcccCCEEEeCCCeeEEEeccccccCCc
Confidence 345699999999999999988899999999875433
No 486
>PF03881 Fructosamin_kin: Fructosamine kinase; InterPro: IPR016477 Ketosamines derive from a non-enzymatic reaction between a sugar and a protein []. Ketosamine-3-kinases (KT3K), of which fructosamine-3-kinase (FN3K) is the best-known example, catalyse the phosphorylation of the ketosamine moiety of glycated proteins. The instability of a phosphorylated ketosamine leads to its degradation, and KT3K is thus thought to be involved in protein repair []. The function of the prokaryotic members of this group has not been established. However, several lines of evidence indicate that they may function as fructosamine-3-kinases (FN3K). First, they are similar to characterised FN3K from mouse and human. Second, the Escherichia coli members are found in close proximity on the genome to fructose-6-phosphate kinase (PfkB). Last, FN3K activity has been found in a Anacystis montana (Gloeocapsa montana Kutzing 1843) [], indicating such activity-directly demonstrated in eukaryotes-is nonetheless not confined to eukaryotes. This family includes eukaryotic fructosamine-3-kinase enzymes [] which may initiate a process leading to the deglycation of fructoselysine and of glycated proteins and in the phosphorylation of 1-deoxy-1-morpholinofructose, fructoselysine, fructoseglycine, fructose and glycated lysozyme. The family also includes bacterial members that have not been characterised but probably have a similar or identical function. For additional information please see [].; PDB: 3JR1_B 3F7W_A.
Probab=96.07 E-value=0.037 Score=53.10 Aligned_cols=76 Identities=20% Similarity=0.292 Sum_probs=43.9
Q ss_pred cccccccccccceeEEEEEecCCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccC---CCCCcccc
Q 011360 194 FASLEKIGSGGCGEVYKAELPGSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQI---RHRNILPL 270 (487)
Q Consensus 194 ~~~~~~lg~G~~g~v~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l---~hpnIv~l 270 (487)
..-.+.++.|....+|+.. .++..+-||.-. ......+..|+.-|+.| ..-.+.++
T Consensus 19 i~~~~~v~GG~i~~a~~~~---~~~~~~FvK~~~------------------~~~~~~f~~Ea~gL~~L~~~~~~~vP~v 77 (288)
T PF03881_consen 19 ITSIEPVSGGDINEAYRLD---TDGGSYFVKVNS------------------ESGRDMFEGEAEGLKALAEANPIRVPKV 77 (288)
T ss_dssp --EEEEE--SSSSEEEEEE---TTS-EEEEEEEE------------------GGGCCHHHHHHHHHHHHCHTTTSBS--E
T ss_pred eeeeEecCCCChhheEEEE---CCCccEEEEecC------------------hhhHHHHHHHHHHHHHHHhcCCCCCCeE
Confidence 4455678889999999986 367789999752 11123445566666555 34467788
Q ss_pred ceEEecCCeeEEEEEecCCC
Q 011360 271 LAHMVRPDCHLLVYEFMKNG 290 (487)
Q Consensus 271 ~~~~~~~~~~~lv~E~~~~g 290 (487)
+++....+..++||||++.+
T Consensus 78 i~~G~~~~~~fLlle~l~~~ 97 (288)
T PF03881_consen 78 IAWGEYDDDAFLLLEFLEMG 97 (288)
T ss_dssp EEEEE-SSCCEEEEE-----
T ss_pred EEEEeecCCceEEEEeecCC
Confidence 88887777789999999776
No 487
>PLN02756 S-methyl-5-thioribose kinase
Probab=95.93 E-value=0.085 Score=52.83 Aligned_cols=80 Identities=11% Similarity=0.135 Sum_probs=46.7
Q ss_pred ccccccccceeEEEEEecCCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCC---CCCccccceE
Q 011360 197 LEKIGSGGCGEVYKAELPGSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQIR---HRNILPLLAH 273 (487)
Q Consensus 197 ~~~lg~G~~g~v~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~---hpnIv~l~~~ 273 (487)
.+.+|.|....||+... .+..++||.-..+..... ..-+....+...|+..|..+. ..++.+++.+
T Consensus 37 ~~eiggGn~N~VyrV~~---~~~svVVKqa~p~~r~vg--------a~wpl~~~R~~~Ea~aL~~~~~~~p~~VPkVy~~ 105 (418)
T PLN02756 37 IKEVGDGNLNFVYIVVS---SSGSFVIKQALPYIRCIG--------ESWPMTKERAYFEATALREHGRLCPDHVPEVYHF 105 (418)
T ss_pred EEEcCCCceeeEEEEEc---CCccEEEEeCCccccCCC--------ccccCCccHHHHHHHHHHHhhhcCCCCCCeEEEE
Confidence 56789999999999864 345688997532111000 000012233344455554442 2467777776
Q ss_pred EecCCeeEEEEEecCC
Q 011360 274 MVRPDCHLLVYEFMKN 289 (487)
Q Consensus 274 ~~~~~~~~lv~E~~~~ 289 (487)
+. +..+++||++++
T Consensus 106 de--d~~vlvME~L~~ 119 (418)
T PLN02756 106 DR--TMALIGMRYLEP 119 (418)
T ss_pred CC--CCCEEEEeecCC
Confidence 65 456789999976
No 488
>TIGR02906 spore_CotS spore coat protein, CotS family. Members of this family include the spore coat proteins CotS and YtaA from Bacillus subtilis and, from other endospore-forming bacteria, homologs that are more closely related to these two than to the spore coat proteins YutH and YsxE. The CotS family is more broadly distributed than YutH or YsxE, but still is not universal among spore-formers.
Probab=95.82 E-value=0.18 Score=49.03 Aligned_cols=30 Identities=27% Similarity=0.372 Sum_probs=26.0
Q ss_pred CCCeeecCCCCCCEEeCCCCCEEEeccCCcc
Q 011360 330 SASIIHGDIKPRNVLLNDDMEACISDLGLAM 360 (487)
Q Consensus 330 ~~givH~Dlkp~Nill~~~~~~kl~DFg~s~ 360 (487)
..+++|||+.+.||+++. +.+.|+||+.+.
T Consensus 186 ~~~liHgD~~~~Nil~~~-~~i~lIDfd~~~ 215 (313)
T TIGR02906 186 IRGFCHQDYAYHNILLKD-NEVYVIDFDYCT 215 (313)
T ss_pred cCceEcCCCCcccEEEeC-CcEEEEECcccc
Confidence 467999999999999987 578999999664
No 489
>PRK12396 5-methylribose kinase; Reviewed
Probab=95.77 E-value=0.032 Score=55.57 Aligned_cols=81 Identities=15% Similarity=0.030 Sum_probs=47.9
Q ss_pred ccccccccceeEEEEEecCCCCceEEEEEeeecCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccC--CCC-CccccceE
Q 011360 197 LEKIGSGGCGEVYKAELPGSNGKMIAIKKVIVYAPISAAELIEEDSKLRDSKLRQIRSEIITASQI--RHR-NILPLLAH 273 (487)
Q Consensus 197 ~~~lg~G~~g~v~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l--~hp-nIv~l~~~ 273 (487)
.+.||.|....||++... ..++.|+||.-..+. + ....-+....+..-|...|+.. -.| ++.++|.
T Consensus 34 ~~eigdGnlN~VfrV~~~-~~~~svIVKQAlp~v--------R-v~~swpL~~~R~~~E~~aL~~~~~~~P~~VP~vy~- 102 (409)
T PRK12396 34 CKEIGDGNLNYVFRVWDE-QKNISVIVKQAGDTA--------R-ISDEFKLSTNRIRIESDVLQLEEELAPGLVPKVYL- 102 (409)
T ss_pred eeEcCCCceEEEEEEeeC-CCCceEEEEeccHhh--------c-cCCCCCCChHHHHHHHHHHHHHHhhCCCcCCeEEE-
Confidence 467899999999999752 135679999642211 1 0111123445556666666655 234 3444543
Q ss_pred EecCCeeEEEEEecCC
Q 011360 274 MVRPDCHLLVYEFMKN 289 (487)
Q Consensus 274 ~~~~~~~~lv~E~~~~ 289 (487)
.++....+|||+++.
T Consensus 103 -~D~e~~~~vMEdL~~ 117 (409)
T PRK12396 103 -FDSVMNCCVMEDLSD 117 (409)
T ss_pred -ECcHHhhHHHHhCcc
Confidence 345566789998854
No 490
>TIGR02904 spore_ysxE spore coat protein YsxE. Members of this family are homologs of the Bacillus subtilis spore coat protein CotS. Members of this family, designated YsxE, are found only in the family Bacillaceae, from among the endospore-forming members of the Firmicutes branch of the Bacteria. As a rule, the ysxE gene is found immediately downstream of spoVID, a gene necessary for spore coat assembly. The protein has been shown to be part of the spore coat.
Probab=95.48 E-value=0.22 Score=48.44 Aligned_cols=32 Identities=13% Similarity=0.269 Sum_probs=28.3
Q ss_pred CCCeeecCCCCCCEEeCCCCCEEEeccCCccc
Q 011360 330 SASIIHGDIKPRNVLLNDDMEACISDLGLAMA 361 (487)
Q Consensus 330 ~~givH~Dlkp~Nill~~~~~~kl~DFg~s~~ 361 (487)
..+++|+|+.+.|+++++++.+.++||..+..
T Consensus 195 ~~~lcHgD~~~~Nvl~~~~~~~~iIDfd~~~~ 226 (309)
T TIGR02904 195 RTVLVHGKLSLSHFLYDETRGGYFINFEKASF 226 (309)
T ss_pred ceeeeCCCCcHHhEEEcCCCCEEEEEhhhccc
Confidence 45799999999999999999999999987743
No 491
>KOG1093 consensus Predicted protein kinase (contains TBC and RHOD domains) [General function prediction only]
Probab=95.47 E-value=0.025 Score=57.30 Aligned_cols=47 Identities=26% Similarity=0.305 Sum_probs=37.0
Q ss_pred HHHHHHHHhccCCCCCccccceEEecC-CeeEEEEEecCCCCHHHHHhh
Q 011360 251 QIRSEIITASQIRHRNILPLLAHMVRP-DCHLLVYEFMKNGSLQDILDD 298 (487)
Q Consensus 251 ~~~~E~~~l~~l~hpnIv~l~~~~~~~-~~~~lv~E~~~~gsL~~~l~~ 298 (487)
++.-....++.+.|+|....+.+-... ....+|||++ +.||.+++..
T Consensus 28 ~ilgr~~~lktl~~~~l~~yl~~~r~~~~r~IVV~e~~-~~Sled~~~~ 75 (725)
T KOG1093|consen 28 QILGRFQYLKSLQHDNLCQYLDFSRGKHERVIVVMEHY-TMSLEDILKT 75 (725)
T ss_pred HHhhhhHHHHhhcCccceeeEeeecCccceEEEEehhh-ccchHHHHHh
Confidence 455567788889999999998876643 4467899999 7799998864
No 492
>PLN02236 choline kinase
Probab=95.43 E-value=0.13 Score=50.99 Aligned_cols=33 Identities=18% Similarity=0.320 Sum_probs=27.8
Q ss_pred CCCCeeecCCCCCCEEeCC-CCCEEEeccCCccc
Q 011360 329 HSASIIHGDIKPRNVLLND-DMEACISDLGLAMA 361 (487)
Q Consensus 329 h~~givH~Dlkp~Nill~~-~~~~kl~DFg~s~~ 361 (487)
+...++|+|+++.||++++ ++.+.++||..+..
T Consensus 198 ~~~~~cH~Dl~~~Nil~~~~~~~~~lID~Eya~~ 231 (344)
T PLN02236 198 QEIGFCHNDLQYGNIMIDEETRAITIIDYEYASY 231 (344)
T ss_pred CCceEEeCCCCcCcEEEeCCCCcEEEEeehhccc
Confidence 4557999999999999986 46799999988754
No 493
>COG5072 ALK1 Serine/threonine kinase of the haspin family [Cell division and chromosome partitioning]
Probab=95.01 E-value=0.071 Score=51.88 Aligned_cols=75 Identities=13% Similarity=0.107 Sum_probs=57.7
Q ss_pred cCCeeEEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCCCCCEEEec
Q 011360 276 RPDCHLLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVLLNDDMEACISD 355 (487)
Q Consensus 276 ~~~~~~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nill~~~~~~kl~D 355 (487)
+....|++|++- |+++... ....+.++..++.+.+..+.-+.. .-..-|||+.-.||||+ +|++.|+|
T Consensus 297 e~~y~yl~~kdh-gt~is~i--------k~~~~~e~lsff~s~~sil~~lek--kf~fehrnlt~~niLId-~GnvtLID 364 (488)
T COG5072 297 ETLYLYLHFKDH-GTPISII--------KADRSEEELSFFWSCISILDILEK--KFPFEHRNLTLDNILID-EGNVTLID 364 (488)
T ss_pred CceEEEEEEecC-Cceeeee--------ecccHHHHHHHHHHHHHHHhhhhh--cCCcccccccccceeee-cCceEEEE
Confidence 344567888876 6666422 335677888999998888877753 33478999999999999 99999999
Q ss_pred cCCcccc
Q 011360 356 LGLAMAI 362 (487)
Q Consensus 356 Fg~s~~~ 362 (487)
|-+++.-
T Consensus 365 fklsRl~ 371 (488)
T COG5072 365 FKLSRLS 371 (488)
T ss_pred eeeeecc
Confidence 9999843
No 494
>PF05659 RPW8: Arabidopsis broad-spectrum mildew resistance protein RPW8; InterPro: IPR008808 This entry represents the RPW8 domain found in several broad-spectrum mildew resistance proteins from Arabidopsis thaliana and other dicots. Plant disease resistance (R) genes control the recognition of specific pathogens and activate subsequent defence responses. The R protein-mediated defences typically involve a rapid, localized necrosis, or hypersensitive response (HR), at the site of infection, and the localised formation of antimicrobial chemicals and proteins that restrict growth of the pathogen. The A. thaliana locus Resistance to Powdery Mildew 8 (RPW8) contains two naturally polymorphic, dominant R genes: RPW8.1 and RPW8.2, which individually control resistance to a broad range of powdery mildew pathogens. They induce localised, salicylic acid-dependent defences similar to those induced by R genes that control specific resistance. Apparently, broad-spectrum resistance mediated by RPW8 uses the same mechanisms as specific resistance [, ]. RPW8.1 and RPW8.2 share similarity with an ~150 amino acid module forming the N terminus of a group of disease resistance proteins, which have a nucleotide-binding site (NBS) and leucine-rich repeats (LRRs) [, ]. The RPW8 domain sequences contain a predicted N-terminal transmembrane (TM) region or possibly a signal peptide, and a coiled-coil (CC) motif [].
Probab=94.92 E-value=0.59 Score=39.84 Aligned_cols=107 Identities=10% Similarity=0.157 Sum_probs=82.7
Q ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhhccCC-ChhHHHHHHHhhhhhccchhhhh
Q 011360 20 SNFHSESIETILQKLTKDWLGQFARQAQIQADLIGWKTMMVKINKVLDDAIEKQTK-EEPVKIWLGKLQHLACDVDYLLD 98 (487)
Q Consensus 20 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~l~~a~~~~~~-~~~~~~w~~~l~~~~yd~~~~~~ 98 (487)
|-+.+|+++.+++.|-..+.........++.-++.|.+||.+|.-+++.-+.-... |.+-+.=+++|++..-++++++.
T Consensus 4 eL~~gaalG~~~~eLlk~v~~~~~k~~~fk~~l~~L~sTl~~i~P~i~eI~~~~~eld~~~~ee~e~L~~~L~~g~~LV~ 83 (147)
T PF05659_consen 4 ELVGGAALGAVFGELLKAVIDASKKSLSFKSILKRLESTLESIIPIIKEIDKLNVELDRPRQEEIERLKELLEKGKELVE 83 (147)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhHHHHHHHHhhhcCCchhHHHHHHHHHHHHHHHHHH
Confidence 44678889999999999999999999999999999999999999999998876553 44557778899999999999999
Q ss_pred hhhhHHHHHHhhhchhhhhhHHHHHHHHH
Q 011360 99 EFQTEAFQTMLLQDADAMSKVKEVNARLQ 127 (487)
Q Consensus 99 ~~~~~~~~~~l~~~~~~~~r~~ei~~~l~ 127 (487)
.+..-.+.... ....+..+++++.+.+.
T Consensus 84 k~sk~~r~n~~-kk~~y~~Ki~~le~~l~ 111 (147)
T PF05659_consen 84 KCSKVRRWNLY-KKPRYARKIEELEESLR 111 (147)
T ss_pred HhccccHHHHH-hhHhHHHHHHHHHHHHH
Confidence 88765432222 33345566666555444
No 495
>PLN02421 phosphotransferase, alcohol group as acceptor/kinase
Probab=94.68 E-value=0.15 Score=50.26 Aligned_cols=31 Identities=19% Similarity=0.305 Sum_probs=26.4
Q ss_pred CeeecCCCCCCEEeCC-CCCEEEeccCCcccc
Q 011360 332 SIIHGDIKPRNVLLND-DMEACISDLGLAMAI 362 (487)
Q Consensus 332 givH~Dlkp~Nill~~-~~~~kl~DFg~s~~~ 362 (487)
-++|.|+.+.||++++ ++.++++||..|..-
T Consensus 183 v~CHnDl~~~NiL~~~~~~~l~lID~EYag~n 214 (330)
T PLN02421 183 VFAHNDLLSGNLMLNEDEGKLYFIDFEYGSYS 214 (330)
T ss_pred EEEECCCCcccEEEeCCCCcEEEEcccccCCC
Confidence 4799999999999975 578999999988543
No 496
>PF12061 DUF3542: Protein of unknown function (DUF3542); InterPro: IPR021929 R1 is a gene for resistance to late blight, the most destructive disease in potato cultivation worldwide. The R1 gene belongs to the class of plant genes for pathogen resistance that have a leucine zipper motif, a putative nucleotide binding domain and a leucine-rich repeat domain []. Most proteins matching this entry are found associated with PF00931 from PFAM.
Probab=94.65 E-value=0.072 Score=50.13 Aligned_cols=80 Identities=14% Similarity=0.176 Sum_probs=66.2
Q ss_pred HHHHHHHHHHHhHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHh-hccCCChhHHHHHHHhhhhhccchhhhhhhhhH
Q 011360 25 ESIETILQKLTKDWLGQFARQAQIQADLIGWKTMMVKINKVLDDAI-EKQTKEEPVKIWLGKLQHLACDVDYLLDEFQTE 103 (487)
Q Consensus 25 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~l~~a~-~~~~~~~~~~~w~~~l~~~~yd~~~~~~~~~~~ 103 (487)
|.+..+|.+|-.....--..+--++.+|+..+.+|+++|.+|+... +...+...+..+..++-+.||..|+++|..-..
T Consensus 296 GyVdFlL~NLkdfq~rysdSlaflKnQiqvIQ~elesLqpFLk~V~ee~~nkh~~~ed~a~~ii~kAyevEYVVDaCi~k 375 (402)
T PF12061_consen 296 GYVDFLLKNLKDFQGRYSDSLAFLKNQIQVIQTELESLQPFLKHVVEEPHNKHDTNEDCATQIIRKAYEVEYVVDACISK 375 (402)
T ss_pred cHHHHHHhhHHHHhccccchHHHHHHHHHHHHHHHHHhhHHHHHHHhccchhhhhhhhHHHHHHHHHhheeeeeehhhcC
Confidence 4567788888888777777777788899999999999999999984 445555559999999999999999999976444
Q ss_pred H
Q 011360 104 A 104 (487)
Q Consensus 104 ~ 104 (487)
.
T Consensus 376 ~ 376 (402)
T PF12061_consen 376 S 376 (402)
T ss_pred C
Confidence 3
No 497
>KOG1236 consensus Predicted unusual protein kinase [General function prediction only]
Probab=94.64 E-value=0.1 Score=51.60 Aligned_cols=60 Identities=18% Similarity=0.190 Sum_probs=41.4
Q ss_pred EEEEEecCCCCHHHHHhhhhcCCCCCChHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCEEeCC
Q 011360 281 LLVYEFMKNGSLQDILDDVSRGRRELDWPSRHRIALGVASGLEYLHMYHSASIIHGDIKPRNVLLND 347 (487)
Q Consensus 281 ~lv~E~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~Lh~~h~~givH~Dlkp~Nill~~ 347 (487)
.++=+|..|.++..++.. ...++....+++.--+.|+--+- --.+++|.|+.|.||++-.
T Consensus 321 vl~E~~~~Gl~v~~~v~~-----~~~pe~l~kkva~lg~~AllkMl--~vDNFvHaDlHPGNVlirf 380 (565)
T KOG1236|consen 321 VLVETYERGLSVLRFVKW-----KSQPEALVKKVAKLGVNALLKML--IVDNFVHADLHPGNVLIRF 380 (565)
T ss_pred eeeeeccccccHHhhhhc-----ccChHHHHHHHHHHHHHHHHHHH--HhhcceecccCCCcEEEEe
Confidence 456678889999988863 34455556666665555554432 2345999999999999953
No 498
>PRK11768 serine/threonine protein kinase; Provisional
Probab=94.23 E-value=1.1 Score=43.88 Aligned_cols=30 Identities=33% Similarity=0.429 Sum_probs=25.2
Q ss_pred CCCeeecCCCCCCEEeCCCCCEEEeccCCccc
Q 011360 330 SASIIHGDIKPRNVLLNDDMEACISDLGLAMA 361 (487)
Q Consensus 330 ~~givH~Dlkp~Nill~~~~~~kl~DFg~s~~ 361 (487)
..++||+|+.+.||+++ + .+.++||+.+..
T Consensus 195 ~~~liHgD~h~~NvL~~-d-~~~iIDFDd~~~ 224 (325)
T PRK11768 195 RLLRLHGDCHPGNILWR-D-GPHFVDLDDARM 224 (325)
T ss_pred CccceecCCCchhcccc-C-CcEEEeCCCCCC
Confidence 56799999999999995 4 578999998753
No 499
>PRK06148 hypothetical protein; Provisional
Probab=93.49 E-value=0.89 Score=51.77 Aligned_cols=32 Identities=31% Similarity=0.503 Sum_probs=26.9
Q ss_pred CCCeeecCCCCCCEEeCCCC--CEE-EeccCCccc
Q 011360 330 SASIIHGDIKPRNVLLNDDM--EAC-ISDLGLAMA 361 (487)
Q Consensus 330 ~~givH~Dlkp~Nill~~~~--~~k-l~DFg~s~~ 361 (487)
..++||+|+.+.||+++.++ .+. |+|||.+..
T Consensus 202 p~~vIHgDln~~NiLv~~~~~~~isGiIDFgDa~~ 236 (1013)
T PRK06148 202 PAQVIHNDANDYNILVDADDGERISGLIDFGDAVH 236 (1013)
T ss_pred CcceECCCCCcccEEEcCCCCcceEEEEECccccc
Confidence 46799999999999999875 555 999998754
No 500
>PRK10271 thiK thiamine kinase; Provisional
Probab=92.06 E-value=0.12 Score=45.99 Aligned_cols=29 Identities=17% Similarity=0.163 Sum_probs=25.7
Q ss_pred CeeecCCCCCCEEeCCCCCEEEeccCCccc
Q 011360 332 SIIHGDIKPRNVLLNDDMEACISDLGLAMA 361 (487)
Q Consensus 332 givH~Dlkp~Nill~~~~~~kl~DFg~s~~ 361 (487)
..+|+|+.|.|+++++++ ++|+||+.+..
T Consensus 78 ~p~H~D~~~~N~~~~~~~-~~lIDwe~a~~ 106 (188)
T PRK10271 78 APLHMDVHAGNLVHSASG-LRLIDWEYAGD 106 (188)
T ss_pred eeecCCCCCccEEEECCC-EEEEeCCcccC
Confidence 479999999999998887 89999998854
Done!