BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 011362
(487 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9LQ14|PPR96_ARATH Pentatricopeptide repeat-containing protein At1g62930,
chloroplastic OS=Arabidopsis thaliana GN=At1g62930 PE=2
SV=2
Length = 629
Score = 353 bits (905), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 179/457 (39%), Positives = 278/457 (60%), Gaps = 6/457 (1%)
Query: 3 RVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYT 62
R+S ++ ++ + P+ VTF +LI GL ++ EA AL ++ GC+PD+FTY
Sbjct: 165 RISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYG 224
Query: 63 TLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELL 122
T+VNGLC+ +AL+L ++M G E + V YTTIID LC V+ A L
Sbjct: 225 TVVNGLCKRGDIDLALSLLKKMEKGK------IEADVVIYTTIIDALCNYKNVNDALNLF 278
Query: 123 LQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKN 182
+M +K I+PNVVTY S+IR C W++A RL +M+++ + PNVVTF+ ++D K
Sbjct: 279 TEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKE 338
Query: 183 GKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSY 242
GK+ EA +L D MI+ + PD FTY++L++GFC+ R++ AK +F M S C V +Y
Sbjct: 339 GKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTY 398
Query: 243 SILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQR 302
+ LI G+CK K +E + L+ EM +G+ + V +NTL GLF+ + A K+F +M
Sbjct: 399 NTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVS 458
Query: 303 NGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEI 362
+GV D TY +DGLCK G + +A+ +F L+ K E DI YN +I+G+CK+G++E
Sbjct: 459 DGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVED 518
Query: 363 ALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIR 422
+LF SL + PNV+ Y+ MI G C G ++A LF +M+E+ +PN T++ LIR
Sbjct: 519 GWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIR 578
Query: 423 GFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLL 459
+R + + EL+ +M+ + DAS +S+V+++L
Sbjct: 579 ARLRDGDKAASAELIKEMRSCGFVGDASTISMVINML 615
Score = 220 bits (561), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 131/452 (28%), Positives = 231/452 (51%), Gaps = 6/452 (1%)
Query: 10 VLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLC 69
+ G +++S P V F L+ + ++ +L +++ D+++Y L+N C
Sbjct: 67 LFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNILINCFC 126
Query: 70 RTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKN 129
R S +AL + +M + G EP+ VT +++++G C + +A L+ QM
Sbjct: 127 RRSQLPLALAVLGKMM----KLGY--EPDIVTLSSLLNGYCHGKRISEAVALVDQMFVME 180
Query: 130 IKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEAS 189
+PN VT+ ++I G +EA L M+ +G QP++ T+ +++ LCK G +D A
Sbjct: 181 YQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLAL 240
Query: 190 RLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGY 249
LL M + + D Y T++D C VN A LF M++ G + V +Y+ LI
Sbjct: 241 SLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCL 300
Query: 250 CKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADT 309
C A L S+M+ + I P+VV + L + ++ A KL+DEM + + D
Sbjct: 301 CNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDI 360
Query: 310 WTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRS 369
+TY + I+G C + + EA +F + C ++ YN+LI G CK+ R+E +ELFR
Sbjct: 361 FTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFRE 420
Query: 370 LPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINE 429
+ LV N VTY+ +I GL G D A+ +F M + V P++IT+ +L+ G + +
Sbjct: 421 MSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGK 480
Query: 430 PSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
K + + +++ + PD +I+++ + K
Sbjct: 481 LEKALVVFEYLQKSKMEPDIYTYNIMIEGMCK 512
Score = 208 bits (530), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 125/424 (29%), Positives = 219/424 (51%), Gaps = 6/424 (1%)
Query: 38 RIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEP 97
++ +A LF ++ P + + L++ + + + + ++L E M N +
Sbjct: 60 KLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISY------ 113
Query: 98 NTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLF 157
+ +Y +I+ C+ + A +L +M +P++VT +S++ G+C+ K +EA L
Sbjct: 114 DLYSYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALV 173
Query: 158 IEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLT 217
+M QPN VTFN ++ L + K EA L+D M+ G +PD FTY T+++G C
Sbjct: 174 DQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKR 233
Query: 218 GRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIH 277
G ++ A L ME + V Y+ +I+ C K + AL+L++EM +KGI+P+VV +
Sbjct: 234 GDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTY 293
Query: 278 NTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRI 337
N+L L + A +L +M + + T+ ID K G +VEA +L+ +
Sbjct: 294 NSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIK 353
Query: 338 LKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDK 397
+ DI Y+SLI+G C RL+ A +F + PNVVTY+ +I G C ++++
Sbjct: 354 RSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEE 413
Query: 398 ARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVD 457
+LF +M + +V N +T++ LI+G + + ++ KM V PD SI++D
Sbjct: 414 GMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLD 473
Query: 458 LLAK 461
L K
Sbjct: 474 GLCK 477
Score = 200 bits (509), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 120/397 (30%), Positives = 203/397 (51%), Gaps = 7/397 (1%)
Query: 2 GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
G + +L ++ K D V +T++I LC + +A LFT++ G P+V TY
Sbjct: 234 GDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTY 293
Query: 62 TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
+L+ LC A L +M PN VT++ +ID KEG + +A++L
Sbjct: 294 NSLIRCLCNYGRWSDASRLLSDMIERK------INPNVVTFSALIDAFVKEGKLVEAEKL 347
Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
+M ++I P++ TY+S+I GFC +EAK +F M+ + PNVVT+N ++ CK
Sbjct: 348 YDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCK 407
Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
+++E L M Q G+ + TYNTL+ G G + A+++F M S G + +
Sbjct: 408 AKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIIT 467
Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
YSIL++G CK ++E AL ++ + ++PD+ +N + G+ + +VE + LF +
Sbjct: 468 YSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLS 527
Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
GV + Y T I G C+ G EA LF ++ + YN+LI + G
Sbjct: 528 LKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKA 587
Query: 362 IALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKA 398
+ EL + + V + T S++I L +DG+++K+
Sbjct: 588 ASAELIKEMRSCGFVGDASTISMVINML-HDGRLEKS 623
Score = 193 bits (491), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 103/328 (31%), Positives = 177/328 (53%), Gaps = 10/328 (3%)
Query: 2 GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
GR S +L +++ P+ VTF++LI E +++EA L+ ++ +PD+FTY
Sbjct: 304 GRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTY 363
Query: 62 TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
++L+NG C A ++FE M + + C PN VTY T+I G CK V++ EL
Sbjct: 364 SSLINGFCMHDRLDEAKHMFELMISKD------CFPNVVTYNTLIKGFCKAKRVEEGMEL 417
Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
+M + + N VTY ++I+G A D + A+++F +M+ GV P+++T+++++D LCK
Sbjct: 418 FREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCK 477
Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
GK+++A + + + + + PD +TYN +++G C G+V +LF S+ G K V
Sbjct: 478 YGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVII 537
Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
Y+ +I+G+C+ E A +L+ EM G P+ +NTL + +L EM+
Sbjct: 538 YTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMR 597
Query: 302 RNGVAADTWTYRTFI----DGLCKNGYI 325
G D T I DG + Y+
Sbjct: 598 SCGFVGDASTISMVINMLHDGRLEKSYL 625
Score = 144 bits (363), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 85/294 (28%), Positives = 146/294 (49%), Gaps = 10/294 (3%)
Query: 2 GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
G++ + ++K PD T++SLI G C R+ EA +F + C P+V TY
Sbjct: 339 GKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTY 398
Query: 62 TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
TL+ G C+ + LF EM+ + G+V NTVTY T+I GL + G D A+++
Sbjct: 399 NTLIKGFCKAKRVEEGMELFREMS----QRGLV--GNTVTYNTLIQGLFQAGDCDMAQKI 452
Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
+M + P+++TY+ ++ G C +A +F + ++P++ T+N++++ +CK
Sbjct: 453 FKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCK 512
Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
GK+++ L + GV+P+ Y T++ GFC G A LF M+ G +
Sbjct: 513 AGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGT 572
Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDV----VIHNTLFVGLFEIHQVE 291
Y+ LI ++ + + L EM S G D ++ N L G E +E
Sbjct: 573 YNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVINMLHDGRLEKSYLE 626
Score = 76.3 bits (186), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 51/220 (23%), Positives = 103/220 (46%)
Query: 254 EIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYR 313
+++ A+ L+ EM+ P +V N L + ++++ + L + MQ ++ D ++Y
Sbjct: 60 KLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYN 119
Query: 314 TFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCG 373
I+ C+ + A+ + + L E DI +SL++G C R+ A+ L +
Sbjct: 120 ILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVM 179
Query: 374 VLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKV 433
PN VT++ +I GL + +A L M P++ T+ ++ G + +
Sbjct: 180 EYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLA 239
Query: 434 IELLHKMKEINVMPDASIVSIVVDLLAKNEISLNSLPSFT 473
+ LL KM++ + D I + ++D L + ++L FT
Sbjct: 240 LSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFT 279
>sp|P0C7Q7|PPR38_ARATH Putative pentatricopeptide repeat-containing protein At1g12700,
mitochondrial OS=Arabidopsis thaliana GN=At1g12700 PE=3
SV=1
Length = 602
Score = 352 bits (902), Expect = 5e-96, Method: Compositional matrix adjust.
Identities = 173/462 (37%), Positives = 275/462 (59%), Gaps = 6/462 (1%)
Query: 3 RVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYT 62
+ + VLG+++K + PD TF +LIKGL E ++ EA L ++ GC+PDV TY
Sbjct: 138 KTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYN 197
Query: 63 TLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELL 122
++VNG+CR+ T +AL+L +M N + + TY+TIID LC++G +D A L
Sbjct: 198 SIVNGICRSGDTSLALDLLRKMEERN------VKADVFTYSTIIDSLCRDGCIDAAISLF 251
Query: 123 LQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKN 182
+M+ K IK +VVTY S++RG C A WN+ L +M+ + + PNV+TFNV++D K
Sbjct: 252 KEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKE 311
Query: 183 GKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSY 242
GK+ EA+ L MI G+ P+ TYNTL+DG+C+ R++ A + M C + ++
Sbjct: 312 GKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTF 371
Query: 243 SILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQR 302
+ LI GYC K ++ + ++ + +G+ + V ++ L G + +++ A +LF EM
Sbjct: 372 TSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVS 431
Query: 303 NGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEI 362
+GV D TY +DGLC NG + +A+E+F L+ K + I Y ++I+G+CK G++E
Sbjct: 432 HGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVED 491
Query: 363 ALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIR 422
A LF SLPC + PNV+TY++MI GLC G + +A L MEE+ PN T++ LIR
Sbjct: 492 AWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIR 551
Query: 423 GFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEI 464
+R + + +L+ +MK DAS + +V+D+L E+
Sbjct: 552 AHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDMLLSGEL 593
Score = 248 bits (634), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 132/420 (31%), Positives = 232/420 (55%), Gaps = 6/420 (1%)
Query: 2 GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
G+VS V++ R++++ PD VT+ S++ G+C A L K+ + DVFTY
Sbjct: 172 GKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTY 231
Query: 62 TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
+T+++ LCR A++LF+EM G+ + + VTY +++ GLCK G + L
Sbjct: 232 STIIDSLCRDGCIDAAISLFKEMETK----GI--KSSVVTYNSLVRGLCKAGKWNDGALL 285
Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
L M + I PNV+T+ ++ F EA L+ EM+ +G+ PN++T+N +MD C
Sbjct: 286 LKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCM 345
Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
++ EA+ +LDLM+++ PD T+ +L+ G+C+ RV+ ++F ++ G +
Sbjct: 346 QNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVT 405
Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
YSIL+ G+C++ +I+ A L+ EM+S G+ PDV+ + L GL + ++E+A ++F+++Q
Sbjct: 406 YSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQ 465
Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
++ + Y T I+G+CK G + +A LF +L + ++ Y +I GLCK G L
Sbjct: 466 KSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLS 525
Query: 362 IALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLI 421
A L R + PN TY+ +I DG + + L +M+ + + M+I
Sbjct: 526 EANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVI 585
Score = 150 bits (379), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 90/350 (25%), Positives = 174/350 (49%), Gaps = 4/350 (1%)
Query: 111 KEGFVDKAKE----LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQ 166
+ G VD K+ L +M P++V ++ K +N ++ G+
Sbjct: 61 RSGIVDIKKDDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIA 120
Query: 167 PNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKEL 226
N+ T N++++ C+ K A +L +++ G PD T+NTL+ G L G+V+ A L
Sbjct: 121 HNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVL 180
Query: 227 FVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFE 286
M GC+ V +Y+ ++NG C++ + AL L +M + +K DV ++T+ L
Sbjct: 181 VDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCR 240
Query: 287 IHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRA 346
++ A LF EM+ G+ + TY + + GLCK G + L + + ++
Sbjct: 241 DGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVIT 300
Query: 347 YNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDME 406
+N L+D K G+L+ A EL++ + + PN++TY+ ++ G C ++ +A ++ M
Sbjct: 301 FNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMV 360
Query: 407 ENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVV 456
N P+++TF LI+G+ + +++ + + ++ +A SI+V
Sbjct: 361 RNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILV 410
Score = 135 bits (340), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 81/289 (28%), Positives = 145/289 (50%), Gaps = 4/289 (1%)
Query: 173 NVIMDELCKNG----KMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFV 228
NV E ++G K D+A L MI+ P ++ T + N +
Sbjct: 53 NVCFRERLRSGIVDIKKDDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCK 112
Query: 229 SMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIH 288
+E G H +++ +I+IN +C+ + A S+ +++ G +PD NTL GLF
Sbjct: 113 QLELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEG 172
Query: 289 QVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYN 348
+V A L D M NG D TY + ++G+C++G A++L + + D+ Y+
Sbjct: 173 KVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYS 232
Query: 349 SLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEEN 408
++ID LC+ G ++ A+ LF+ + + +VVTY+ ++ GLC G+ + L DM
Sbjct: 233 TIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSR 292
Query: 409 AVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVD 457
+VPNVITF++L+ F++ + + EL +M + P+ + ++D
Sbjct: 293 EIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMD 341
>sp|Q9CAN0|PPR99_ARATH Pentatricopeptide repeat-containing protein At1g63130,
mitochondrial OS=Arabidopsis thaliana GN=At1g63130 PE=2
SV=1
Length = 630
Score = 346 bits (887), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 175/457 (38%), Positives = 274/457 (59%), Gaps = 6/457 (1%)
Query: 3 RVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYT 62
R+S ++G++++ + PD+ TF +LI GL +R EA AL ++ V GC+PD+ TY
Sbjct: 166 RISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYG 225
Query: 63 TLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELL 122
+VNGLC+ +AL+L ++M G EP V Y TIID LC V+ A L
Sbjct: 226 IVVNGLCKRGDIDLALSLLKKMEQGK------IEPGVVIYNTIIDALCNYKNVNDALNLF 279
Query: 123 LQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKN 182
+M +K I+PNVVTY S+IR C W++A RL +M+++ + PNVVTF+ ++D K
Sbjct: 280 TEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKE 339
Query: 183 GKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSY 242
GK+ EA +L D MI+ + PD FTY++L++GFC+ R++ AK +F M S C V +Y
Sbjct: 340 GKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTY 399
Query: 243 SILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQR 302
+ LI G+CK K ++ + L+ EM +G+ + V + TL G F+ + + A +F +M
Sbjct: 400 NTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVS 459
Query: 303 NGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEI 362
+GV D TY +DGLC NG + A+ +F L+ K E DI YN +I+G+CK+G++E
Sbjct: 460 DGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVED 519
Query: 363 ALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIR 422
+LF SL + PNVVTY+ M+ G C G ++A LF +M+E +P+ T++ LIR
Sbjct: 520 GWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIR 579
Query: 423 GFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLL 459
+R + + EL+ +M+ + DAS + +V ++L
Sbjct: 580 AHLRDGDKAASAELIREMRSCRFVGDASTIGLVTNML 616
Score = 220 bits (560), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 129/452 (28%), Positives = 232/452 (51%), Gaps = 6/452 (1%)
Query: 10 VLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLC 69
+ G ++KS P V F+ L+ + ++ +L +++ G +++TY+ L+N C
Sbjct: 68 LFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSILINCFC 127
Query: 70 RTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKN 129
R S +AL + +M + G EP+ VT ++++G C + A L+ QM +
Sbjct: 128 RRSQLSLALAVLAKMM----KLGY--EPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMG 181
Query: 130 IKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEAS 189
+P+ T+ ++I G +EA L M+ +G QP++VT+ ++++ LCK G +D A
Sbjct: 182 YQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLAL 241
Query: 190 RLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGY 249
LL M Q + P YNT++D C VN A LF M++ G + V +Y+ LI
Sbjct: 242 SLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCL 301
Query: 250 CKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADT 309
C A L S+M+ + I P+VV + L + ++ A KL+DEM + + D
Sbjct: 302 CNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDI 361
Query: 310 WTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRS 369
+TY + I+G C + + EA +F + C ++ YN+LI G CK+ R++ +ELFR
Sbjct: 362 FTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFRE 421
Query: 370 LPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINE 429
+ LV N VTY+ +I G + D A+ +F M + V+P+++T+ +L+ G +
Sbjct: 422 MSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGK 481
Query: 430 PSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
+ + ++ + PD +I+++ + K
Sbjct: 482 VETALVVFEYLQRSKMEPDIYTYNIMIEGMCK 513
Score = 212 bits (539), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 122/407 (29%), Positives = 213/407 (52%), Gaps = 6/407 (1%)
Query: 56 PDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFV 115
P + ++ L++ + + + + ++L E+M N G+ N TY+ +I+ C+ +
Sbjct: 79 PSIVEFSKLLSAIAKMNKFDLVISLGEQMQN----LGI--SHNLYTYSILINCFCRRSQL 132
Query: 116 DKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVI 175
A +L +M +P++VT S++ GFC+ ++A L +M++ G QP+ TFN +
Sbjct: 133 SLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTL 192
Query: 176 MDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGC 235
+ L ++ + EA L+D M+ G +PD TY +++G C G ++ A L ME
Sbjct: 193 IHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKI 252
Query: 236 KHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFK 295
+ V Y+ +I+ C K + AL+L++EM +KGI+P+VV +N+L L + A +
Sbjct: 253 EPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASR 312
Query: 296 LFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLC 355
L +M + + T+ ID K G +VEA +L+ + + DI Y+SLI+G C
Sbjct: 313 LLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFC 372
Query: 356 KSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVI 415
RL+ A +F + PNVVTY+ +I G C ++D+ +LF +M + +V N +
Sbjct: 373 MHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTV 432
Query: 416 TFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKN 462
T+ LI GF + E + +M V+PD SI++D L N
Sbjct: 433 TYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNN 479
Score = 199 bits (505), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 121/404 (29%), Positives = 203/404 (50%), Gaps = 10/404 (2%)
Query: 2 GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
G + +L ++ + P V + ++I LC + +A LFT++ G P+V TY
Sbjct: 235 GDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTY 294
Query: 62 TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
+L+ LC A L +M PN VT++ +ID KEG + +A++L
Sbjct: 295 NSLIRCLCNYGRWSDASRLLSDMIERK------INPNVVTFSALIDAFVKEGKLVEAEKL 348
Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
+M ++I P++ TY+S+I GFC +EAK +F M+ + PNVVT+N ++ CK
Sbjct: 349 YDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCK 408
Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
++DE L M Q G+ + TY TL+ GF ++A+ +F M S G + +
Sbjct: 409 AKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMT 468
Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
YSIL++G C N ++E AL ++ + ++PD+ +N + G+ + +VE + LF +
Sbjct: 469 YSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLS 528
Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
GV + TY T + G C+ G EA LF ++ D YN+LI + G
Sbjct: 529 LKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRAHLRDGDKA 588
Query: 362 IALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDM 405
+ EL R + V + T ++ + +DG++DK+ FL M
Sbjct: 589 ASAELIREMRSCRFVGDASTIG-LVTNMLHDGRLDKS---FLKM 628
Score = 158 bits (399), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 96/307 (31%), Positives = 157/307 (51%)
Query: 151 NEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTL 210
++A LF +M+ P++V F+ ++ + K K D L + M G+ + +TY+ L
Sbjct: 63 DDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIL 122
Query: 211 LDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGI 270
++ FC +++ A + M +G + + + + L+NG+C I A+SL +M+ G
Sbjct: 123 INCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGY 182
Query: 271 KPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVE 330
+PD NTL GLF ++ A L D M G D TY ++GLCK G I A+
Sbjct: 183 QPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALS 242
Query: 331 LFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLC 390
L + K E + YN++ID LC + AL LF + + PNVVTY+ +I LC
Sbjct: 243 LLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLC 302
Query: 391 NDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDAS 450
N G+ A L DM E + PNV+TF LI F++ + + +L +M + ++ PD
Sbjct: 303 NYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIF 362
Query: 451 IVSIVVD 457
S +++
Sbjct: 363 TYSSLIN 369
Score = 154 bits (390), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 83/278 (29%), Positives = 146/278 (52%)
Query: 184 KMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYS 243
K+D+A L M++ P ++ LL + + L M+++G H +++YS
Sbjct: 61 KLDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYS 120
Query: 244 ILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRN 303
ILIN +C+ ++ AL++ ++M+ G +PD+V N+L G +++ A L +M
Sbjct: 121 ILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEM 180
Query: 304 GVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIA 363
G D++T+ T I GL ++ EAV L + + C+ D+ Y +++GLCK G +++A
Sbjct: 181 GYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLA 240
Query: 364 LELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRG 423
L L + + G + P VV Y+ +I LCN ++ A +LF +M+ + PNV+T++ LIR
Sbjct: 241 LSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRC 300
Query: 424 FIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
S LL M E + P+ S ++D K
Sbjct: 301 LCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVK 338
Score = 78.2 bits (191), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 49/220 (22%), Positives = 107/220 (48%)
Query: 254 EIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYR 313
+++ A++L+ +M+ P +V + L + ++++ + L ++MQ G++ + +TY
Sbjct: 61 KLDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYS 120
Query: 314 TFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCG 373
I+ C+ + A+ + + L E DI NSL++G C R+ A+ L +
Sbjct: 121 ILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEM 180
Query: 374 VLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKV 433
P+ T++ +I GL + +A L M P+++T+ +++ G + +
Sbjct: 181 GYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLA 240
Query: 434 IELLHKMKEINVMPDASIVSIVVDLLAKNEISLNSLPSFT 473
+ LL KM++ + P I + ++D L + ++L FT
Sbjct: 241 LSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFT 280
Score = 36.6 bits (83), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 20/77 (25%), Positives = 44/77 (57%), Gaps = 1/77 (1%)
Query: 391 NDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDAS 450
ND ++D A +LF DM ++ P+++ F L+ ++N+ VI L +M+ + + +
Sbjct: 58 NDLKLDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLY 117
Query: 451 IVSIVVDLLA-KNEISL 466
SI+++ ++++SL
Sbjct: 118 TYSILINCFCRRSQLSL 134
>sp|Q9CAN5|PPR98_ARATH Pentatricopeptide repeat-containing protein At1g63080,
mitochondrial OS=Arabidopsis thaliana GN=At1g63080 PE=2
SV=1
Length = 614
Score = 343 bits (879), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 170/457 (37%), Positives = 274/457 (59%), Gaps = 6/457 (1%)
Query: 3 RVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYT 62
R+S ++ ++++ + PD VTFT+L+ GL ++ EA AL ++ V GC+PD+ TY
Sbjct: 150 RISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYG 209
Query: 63 TLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELL 122
++NGLC+ +ALNL +M G E + V Y+T+ID LCK VD A L
Sbjct: 210 AVINGLCKRGEPDLALNLLNKMEKGK------IEADVVIYSTVIDSLCKYRHVDDALNLF 263
Query: 123 LQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKN 182
+M +K I+P+V TY+S+I C W++A RL +M+++ + PNVVTFN ++D K
Sbjct: 264 TEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKE 323
Query: 183 GKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSY 242
GK+ EA +L D MIQ + P+ TYN+L++GFC+ R++ A+++F M S C V +Y
Sbjct: 324 GKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTY 383
Query: 243 SILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQR 302
+ LING+CK K++ + L+ +M +G+ + V + TL G F+ + A +F +M
Sbjct: 384 NTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVS 443
Query: 303 NGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEI 362
+GV + TY T +DGLCKNG + +A+ +F L+ K E DI YN + +G+CK+G++E
Sbjct: 444 DGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVED 503
Query: 363 ALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIR 422
+LF SL + P+V+ Y+ MI G C G ++A LF+ M+E+ +P+ T++ LIR
Sbjct: 504 GWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIR 563
Query: 423 GFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLL 459
+R + + EL+ +M+ DAS +V D+L
Sbjct: 564 AHLRDGDKAASAELIKEMRSCRFAGDASTYGLVTDML 600
Score = 222 bits (566), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 133/453 (29%), Positives = 234/453 (51%), Gaps = 8/453 (1%)
Query: 10 VLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLC 69
+ G ++KS P V F+ L+ + + + K+ + G +++TY ++N LC
Sbjct: 52 LFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNIMINCLC 111
Query: 70 RTSHTIVALNLFEEMAN-GNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDK 128
R S AL + +M G G P+ VT ++++G C + +A L+ QM +
Sbjct: 112 RRSQLSFALAILGKMMKLGYG-------PSIVTLNSLLNGFCHGNRISEAVALVDQMVEM 164
Query: 129 NIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEA 188
+P+ VT+T+++ G +EA L M+ +G QP++VT+ +++ LCK G+ D A
Sbjct: 165 GYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLA 224
Query: 189 SRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILING 248
LL+ M + + D Y+T++D C V+ A LF M++ G + VF+YS LI+
Sbjct: 225 LNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISC 284
Query: 249 YCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAAD 308
C A L S+ML + I P+VV N+L + ++ A KLFDEM + + +
Sbjct: 285 LCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPN 344
Query: 309 TWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFR 368
TY + I+G C + + EA ++F + C D+ YN+LI+G CK+ ++ +ELFR
Sbjct: 345 IVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFR 404
Query: 369 SLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRIN 428
+ LV N VTY+ +I G D A+ +F M + V PN++T++ L+ G +
Sbjct: 405 DMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNG 464
Query: 429 EPSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
+ K + + +++ + PD +I+ + + K
Sbjct: 465 KLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCK 497
Score = 200 bits (509), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 123/425 (28%), Positives = 217/425 (51%), Gaps = 6/425 (1%)
Query: 38 RIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEP 97
++ EA LF ++ P + ++ L++ + + + ++ E+M GV
Sbjct: 45 KLDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKME----ILGV--SH 98
Query: 98 NTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLF 157
N TY +I+ LC+ + A +L +M P++VT S++ GFC+ +EA L
Sbjct: 99 NLYTYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALV 158
Query: 158 IEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLT 217
+M++ G QP+ VTF ++ L ++ K EA L++ M+ G +PD TY +++G C
Sbjct: 159 DQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKR 218
Query: 218 GRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIH 277
G + A L ME + V YS +I+ CK + ++ AL+L++EM +KGI+PDV +
Sbjct: 219 GEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTY 278
Query: 278 NTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRI 337
++L L + A +L +M + + T+ + ID K G ++EA +LF +
Sbjct: 279 SSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQ 338
Query: 338 LKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDK 397
+ +I YNSLI+G C RL+ A ++F + +P+VVTY+ +I G C ++
Sbjct: 339 RSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVD 398
Query: 398 ARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVD 457
+LF DM +V N +T+ LI GF + ++ + +M V P+ + ++D
Sbjct: 399 GMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLD 458
Query: 458 LLAKN 462
L KN
Sbjct: 459 GLCKN 463
Score = 194 bits (493), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 107/318 (33%), Positives = 167/318 (52%), Gaps = 6/318 (1%)
Query: 2 GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
GR S +L +L+ P+ VTF SLI E +++EA LF ++ +P++ TY
Sbjct: 289 GRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTY 348
Query: 62 TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
+L+NG C A +F M + + C P+ VTY T+I+G CK V EL
Sbjct: 349 NSLINGFCMHDRLDEAQQIFTLMVSKD------CLPDVVTYNTLINGFCKAKKVVDGMEL 402
Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
M + + N VTYT++I GF A D + A+ +F +M+ GV PN++T+N ++D LCK
Sbjct: 403 FRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCK 462
Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
NGK+++A + + + + + PD +TYN + +G C G+V +LF S+ G K V +
Sbjct: 463 NGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIA 522
Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
Y+ +I+G+CK E A +L+ +M G PD +NTL + +L EM+
Sbjct: 523 YNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMR 582
Query: 302 RNGVAADTWTYRTFIDGL 319
A D TY D L
Sbjct: 583 SCRFAGDASTYGLVTDML 600
Score = 158 bits (400), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 97/361 (26%), Positives = 188/361 (52%), Gaps = 6/361 (1%)
Query: 115 VDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNV 174
+D+A +L +M P++V ++ ++ K ++ +M GV N+ T+N+
Sbjct: 46 LDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNI 105
Query: 175 IMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMG 234
+++ LC+ ++ A +L M++ G P T N+LL+GFC R++ A L M MG
Sbjct: 106 MINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMG 165
Query: 235 CKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAF 294
+ +++ L++G ++ + A++L M+ KG +PD+V + + GL + + + A
Sbjct: 166 YQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLAL 225
Query: 295 KLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGL 354
L ++M++ + AD Y T ID LCK ++ +A+ LF + D+ Y+SLI L
Sbjct: 226 NLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCL 285
Query: 355 CKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNV 414
C GR A L + + PNVVT++ +I +G++ +A LF +M + ++ PN+
Sbjct: 286 CNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNI 345
Query: 415 ITFDMLIRGFI---RINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEISLNSLPS 471
+T++ LI GF R++E ++ L M + +PD + +++ K + ++ +
Sbjct: 346 VTYNSLINGFCMHDRLDEAQQIFTL---MVSKDCLPDVVTYNTLINGFCKAKKVVDGMEL 402
Query: 472 F 472
F
Sbjct: 403 F 403
>sp|Q9SXD8|PPR90_ARATH Pentatricopeptide repeat-containing protein At1g62590
OS=Arabidopsis thaliana GN=At1g62590 PE=2 SV=1
Length = 634
Score = 342 bits (877), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 173/457 (37%), Positives = 275/457 (60%), Gaps = 6/457 (1%)
Query: 3 RVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYT 62
R+S ++ ++++ + PD +TFT+LI GL ++ EA AL ++ GC+P++ TY
Sbjct: 170 RISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYG 229
Query: 63 TLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELL 122
+VNGLC+ T +ALNL +M E + V + TIID LCK VD A L
Sbjct: 230 VVVNGLCKRGDTDLALNLLNKMEAAK------IEADVVIFNTIIDSLCKYRHVDDALNLF 283
Query: 123 LQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKN 182
+M+ K I+PNVVTY+S+I C W++A +L +M+++ + PN+VTFN ++D K
Sbjct: 284 KEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKE 343
Query: 183 GKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSY 242
GK EA +L D MI+ + PD FTYN+L++GFC+ R++ AK++F M S C V +Y
Sbjct: 344 GKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTY 403
Query: 243 SILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQR 302
+ LI G+CK+K +E L+ EM +G+ D V + TL GLF + A K+F +M
Sbjct: 404 NTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVS 463
Query: 303 NGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEI 362
+GV D TY +DGLC NG + +A+E+F ++ + + DI Y ++I+G+CK+G+++
Sbjct: 464 DGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDD 523
Query: 363 ALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIR 422
+LF SL + PNVVTY+ MI GLC+ + +A L M+E+ +PN T++ LIR
Sbjct: 524 GWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIR 583
Query: 423 GFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLL 459
+R + + EL+ +M+ + DAS + +V ++L
Sbjct: 584 AHLRDGDKAASAELIREMRSCRFVGDASTIGLVANML 620
Score = 230 bits (586), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 137/452 (30%), Positives = 233/452 (51%), Gaps = 6/452 (1%)
Query: 10 VLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLC 69
+ G ++KS P V F L+ + + +L K++ ++TY L+N C
Sbjct: 72 LFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILINCFC 131
Query: 70 RTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKN 129
R S +AL L +M + G EP+ VT +++++G C + A L+ QM +
Sbjct: 132 RRSQISLALALLGKMM----KLGY--EPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMG 185
Query: 130 IKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEAS 189
+P+ +T+T++I G +EA L M+ +G QPN+VT+ V+++ LCK G D A
Sbjct: 186 YRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLAL 245
Query: 190 RLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGY 249
LL+ M + D +NT++D C V+ A LF ME+ G + V +YS LI+
Sbjct: 246 NLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCL 305
Query: 250 CKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADT 309
C A L S+M+ K I P++V N L + + A KL+D+M + + D
Sbjct: 306 CSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDI 365
Query: 310 WTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRS 369
+TY + ++G C + + +A ++F + C D+ YN+LI G CKS R+E ELFR
Sbjct: 366 FTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFRE 425
Query: 370 LPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINE 429
+ LV + VTY+ +I GL +DG D A+ +F M + V P+++T+ +L+ G +
Sbjct: 426 MSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGK 485
Query: 430 PSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
K +E+ M++ + D I + +++ + K
Sbjct: 486 LEKALEVFDYMQKSEIKLDIYIYTTMIEGMCK 517
Score = 216 bits (551), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 136/467 (29%), Positives = 224/467 (47%), Gaps = 41/467 (8%)
Query: 25 TFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEEM 84
T+ LI C S+I A AL K+ G EP + T ++L+NG C A+ L ++M
Sbjct: 122 TYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQM 181
Query: 85 ANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGF 144
E G P+T+T+TT+I GL +A L+ +M + +PN+VTY V+ G
Sbjct: 182 V----EMGY--RPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGL 235
Query: 145 CYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDA 204
C D + A L +M ++ +VV FN I+D LCK +D+A L M G+RP+
Sbjct: 236 CKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNV 295
Query: 205 FTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSE 264
TY++L+ C GR + A +L M + +++ LI+ + K + A LY +
Sbjct: 296 VTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDD 355
Query: 265 MLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGY 324
M+ + I PD+ +N+L G ++++A ++F+ M D TY T I G CK+
Sbjct: 356 MIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKR 415
Query: 325 IVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSI 384
+ + ELF + D Y +LI GL G + A ++F+ + + P+++TYSI
Sbjct: 416 VEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSI 475
Query: 385 MIGGLCNDGQMDKA-----------------------------------RDLFLDMEENA 409
++ GLCN+G+++KA DLF +
Sbjct: 476 LLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKG 535
Query: 410 VVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVV 456
V PNV+T++ +I G + LL KMKE +P++ + ++
Sbjct: 536 VKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLI 582
Score = 199 bits (507), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 124/473 (26%), Positives = 232/473 (49%), Gaps = 10/473 (2%)
Query: 7 GFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVN 66
G GR F+ + + +++ + ++ +A LF + P + + L++
Sbjct: 38 GMCYWGR----AFSSGSGDYREILRNGLHDMKLDDAIGLFGGMVKSRPLPSIVEFNKLLS 93
Query: 67 GLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMK 126
+ + V ++L E+M G+ TY +I+ C+ + A LL +M
Sbjct: 94 AIAKMKKFDVVISLGEKMQRLEIVHGLY------TYNILINCFCRRSQISLALALLGKMM 147
Query: 127 DKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMD 186
+P++VT +S++ G+C+ K ++A L +M++ G +P+ +TF ++ L + K
Sbjct: 148 KLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKAS 207
Query: 187 EASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILI 246
EA L+D M+Q G +P+ TY +++G C G + A L ME+ + V ++ +I
Sbjct: 208 EAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTII 267
Query: 247 NGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVA 306
+ CK + ++ AL+L+ EM +KGI+P+VV +++L L + A +L +M +
Sbjct: 268 DSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKIN 327
Query: 307 ADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALEL 366
+ T+ ID K G VEA +L+ + + DI YNSL++G C RL+ A ++
Sbjct: 328 PNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQM 387
Query: 367 FRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIR 426
F + P+VVTY+ +I G C +++ +LF +M +V + +T+ LI+G
Sbjct: 388 FEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFH 447
Query: 427 INEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEISLNSLPSFTVHEQQE 479
+ ++ +M V PD SI++D L N +L F ++ E
Sbjct: 448 DGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSE 500
Score = 182 bits (461), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 95/310 (30%), Positives = 165/310 (53%), Gaps = 6/310 (1%)
Query: 2 GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
GR S +L +++ P+ VTF +LI E + +EA L+ + +PD+FTY
Sbjct: 309 GRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTY 368
Query: 62 TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
+LVNG C A +FE M + + C P+ VTY T+I G CK V+ EL
Sbjct: 369 NSLVNGFCMHDRLDKAKQMFEFMVSKD------CFPDVVTYNTLIKGFCKSKRVEDGTEL 422
Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
+M + + + VTYT++I+G + D + A+++F +M+ GV P+++T+++++D LC
Sbjct: 423 FREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCN 482
Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
NGK+++A + D M + ++ D + Y T+++G C G+V+ +LF S+ G K V +
Sbjct: 483 NGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVT 542
Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
Y+ +I+G C + ++ A +L +M G P+ +NTL + +L EM+
Sbjct: 543 YNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIREMR 602
Query: 302 RNGVAADTWT 311
D T
Sbjct: 603 SCRFVGDAST 612
>sp|Q9LQ16|PPR94_ARATH Pentatricopeptide repeat-containing protein At1g62910
OS=Arabidopsis thaliana GN=At1g62910 PE=2 SV=1
Length = 632
Score = 338 bits (866), Expect = 7e-92, Method: Compositional matrix adjust.
Identities = 172/457 (37%), Positives = 269/457 (58%), Gaps = 6/457 (1%)
Query: 3 RVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYT 62
R+S ++ ++++ + PD TFT+LI GL ++ EA AL ++ GC+PD+ TY
Sbjct: 168 RISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYG 227
Query: 63 TLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELL 122
T+VNGLC+ +AL+L ++M G E + V Y TIIDGLCK +D A L
Sbjct: 228 TVVNGLCKRGDIDLALSLLKKMEKGK------IEADVVIYNTIIDGLCKYKHMDDALNLF 281
Query: 123 LQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKN 182
+M +K I+P+V TY+S+I C W++A RL +M+++ + PNVVTF+ ++D K
Sbjct: 282 TEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKE 341
Query: 183 GKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSY 242
GK+ EA +L D MI+ + PD FTY++L++GFC+ R++ AK +F M S C V +Y
Sbjct: 342 GKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTY 401
Query: 243 SILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQR 302
S LI G+CK K +E + L+ EM +G+ + V + TL G F+ + A +F +M
Sbjct: 402 STLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVS 461
Query: 303 NGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEI 362
GV + TY +DGLCKNG + +A+ +F L+ E DI YN +I+G+CK+G++E
Sbjct: 462 VGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVED 521
Query: 363 ALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIR 422
ELF +L + PNV+ Y+ MI G C G ++A L M+E+ +PN T++ LIR
Sbjct: 522 GWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIR 581
Query: 423 GFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLL 459
+R + EL+ +M+ DAS + +V ++L
Sbjct: 582 ARLRDGDREASAELIKEMRSCGFAGDASTIGLVTNML 618
Score = 230 bits (586), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 134/459 (29%), Positives = 238/459 (51%), Gaps = 6/459 (1%)
Query: 3 RVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYT 62
+V + G ++KS P V F L+ + ++ +L +++ G D++TY+
Sbjct: 63 KVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYS 122
Query: 63 TLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELL 122
+N CR S +AL + +M + G EP+ VT +++++G C + A L+
Sbjct: 123 IFINCFCRRSQLSLALAVLAKMM----KLGY--EPDIVTLSSLLNGYCHSKRISDAVALV 176
Query: 123 LQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKN 182
QM + KP+ T+T++I G +EA L +M+ +G QP++VT+ +++ LCK
Sbjct: 177 DQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKR 236
Query: 183 GKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSY 242
G +D A LL M + + D YNT++DG C ++ A LF M++ G + VF+Y
Sbjct: 237 GDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTY 296
Query: 243 SILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQR 302
S LI+ C A L S+M+ + I P+VV + L + ++ A KL+DEM +
Sbjct: 297 SSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIK 356
Query: 303 NGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEI 362
+ D +TY + I+G C + + EA +F + C ++ Y++LI G CK+ R+E
Sbjct: 357 RSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEE 416
Query: 363 ALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIR 422
+ELFR + LV N VTY+ +I G D A+ +F M V PN++T+++L+
Sbjct: 417 GMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLD 476
Query: 423 GFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
G + + +K + + ++ + PD +I+++ + K
Sbjct: 477 GLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCK 515
Score = 210 bits (535), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 126/428 (29%), Positives = 225/428 (52%), Gaps = 12/428 (2%)
Query: 38 RIMEAAALF---TKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVV 94
++ +A LF K R F P + + L++ + + + + ++L E+M G+
Sbjct: 63 KVDDAVDLFGDMVKSRPF---PSIVEFNKLLSAVAKMNKFELVISLGEQMQT----LGI- 114
Query: 95 CEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAK 154
+ TY+ I+ C+ + A +L +M +P++VT +S++ G+C++K ++A
Sbjct: 115 -SHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAV 173
Query: 155 RLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGF 214
L +M++ G +P+ TF ++ L + K EA L+D M+Q G +PD TY T+++G
Sbjct: 174 ALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGL 233
Query: 215 CLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDV 274
C G ++ A L ME + V Y+ +I+G CK K ++ AL+L++EM +KGI+PDV
Sbjct: 234 CKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDV 293
Query: 275 VIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHT 334
+++L L + A +L +M + + T+ ID K G +VEA +L+
Sbjct: 294 FTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDE 353
Query: 335 LRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQ 394
+ + DI Y+SLI+G C RL+ A +F + PNVVTYS +I G C +
Sbjct: 354 MIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKR 413
Query: 395 MDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSI 454
+++ +LF +M + +V N +T+ LI GF + + + +M + V P+ +I
Sbjct: 414 VEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNI 473
Query: 455 VVDLLAKN 462
++D L KN
Sbjct: 474 LLDGLCKN 481
Score = 204 bits (518), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 105/310 (33%), Positives = 174/310 (56%), Gaps = 6/310 (1%)
Query: 2 GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
GR S +L +++ P+ VTF++LI E +++EA L+ ++ +PD+FTY
Sbjct: 307 GRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTY 366
Query: 62 TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
++L+NG C A ++FE M + + C PN VTY+T+I G CK V++ EL
Sbjct: 367 SSLINGFCMHDRLDEAKHMFELMISKD------CFPNVVTYSTLIKGFCKAKRVEEGMEL 420
Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
+M + + N VTYT++I GF A+D + A+ +F +M+ GV PN++T+N+++D LCK
Sbjct: 421 FREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCK 480
Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
NGK+ +A + + + + + PD +TYN +++G C G+V ELF ++ G V +
Sbjct: 481 NGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIA 540
Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
Y+ +I+G+C+ E A SL +M G P+ +NTL E + +L EM+
Sbjct: 541 YNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREASAELIKEMR 600
Query: 302 RNGVAADTWT 311
G A D T
Sbjct: 601 SCGFAGDAST 610
Score = 202 bits (513), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 119/404 (29%), Positives = 209/404 (51%), Gaps = 10/404 (2%)
Query: 2 GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
G + +L ++ K D V + ++I GLC + +A LFT++ G PDVFTY
Sbjct: 237 GDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTY 296
Query: 62 TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
++L++ LC A L +M PN VT++ +ID KEG + +A++L
Sbjct: 297 SSLISCLCNYGRWSDASRLLSDMIERK------INPNVVTFSALIDAFVKEGKLVEAEKL 350
Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
+M ++I P++ TY+S+I GFC +EAK +F M+ + PNVVT++ ++ CK
Sbjct: 351 YDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCK 410
Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
+++E L M Q G+ + TY TL+ GF ++A+ +F M S+G + +
Sbjct: 411 AKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILT 470
Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
Y+IL++G CKN ++ A+ ++ + ++PD+ +N + G+ + +VE ++LF +
Sbjct: 471 YNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLS 530
Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
GV+ + Y T I G C+ G EA L ++ + YN+LI + G E
Sbjct: 531 LKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDRE 590
Query: 362 IALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDM 405
+ EL + + + T ++ + +DG++DK+ FLDM
Sbjct: 591 ASAELIKEMRSCGFAGDASTIG-LVTNMLHDGRLDKS---FLDM 630
Score = 85.9 bits (211), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 61/253 (24%), Positives = 120/253 (47%), Gaps = 6/253 (2%)
Query: 227 FVSMESMGCKHTVFSYS------ILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTL 280
F ++ GC F+ + IL N +++ A+ L+ +M+ P +V N L
Sbjct: 30 FFNLCGSGCWERSFASASGDYREILRNRLSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKL 89
Query: 281 FVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKC 340
+ ++++ E L ++MQ G++ D +TY FI+ C+ + A+ + + L
Sbjct: 90 LSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGY 149
Query: 341 EFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARD 400
E DI +SL++G C S R+ A+ L + P+ T++ +I GL + +A
Sbjct: 150 EPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVA 209
Query: 401 LFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLA 460
L M + P+++T+ ++ G + + + LL KM++ + D I + ++D L
Sbjct: 210 LVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLC 269
Query: 461 KNEISLNSLPSFT 473
K + ++L FT
Sbjct: 270 KYKHMDDALNLFT 282
>sp|Q0WKV3|PPR36_ARATH Pentatricopeptide repeat-containing protein At1g12300,
mitochondrial OS=Arabidopsis thaliana GN=At1g12300 PE=2
SV=1
Length = 637
Score = 335 bits (858), Expect = 6e-91, Method: Compositional matrix adjust.
Identities = 170/463 (36%), Positives = 269/463 (58%), Gaps = 6/463 (1%)
Query: 2 GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
GRVS ++ R+++ PD +T +L+ GLC + EA L K+ +GC+P+ TY
Sbjct: 172 GRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTY 231
Query: 62 TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
++N +C++ T +A+ L +M N + + V Y+ IIDGLCK G +D A L
Sbjct: 232 GPVLNVMCKSGQTALAMELLRKMEERNIKL------DAVKYSIIIDGLCKHGSLDNAFNL 285
Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
+M+ K I N++TY +I GFC A W++ +L +M+ + + PNVVTF+V++D K
Sbjct: 286 FNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVK 345
Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
GK+ EA L MI G+ PD TY +L+DGFC ++ A ++ M S GC + +
Sbjct: 346 EGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRT 405
Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
++ILINGYCK I+ L L+ +M +G+ D V +NTL G E+ ++ A +LF EM
Sbjct: 406 FNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMV 465
Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
V + TY+ +DGLC NG +A+E+F + K E DI YN +I G+C + +++
Sbjct: 466 SRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVD 525
Query: 362 IALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLI 421
A +LF SLP + P V TY+IMIGGLC G + +A LF MEE+ P+ T+++LI
Sbjct: 526 DAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILI 585
Query: 422 RGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEI 464
R + + +K ++L+ ++K DAS + +V+D+L+ +
Sbjct: 586 RAHLGDGDATKSVKLIEELKRCGFSVDASTIKMVIDMLSDGRL 628
Score = 247 bits (631), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 133/436 (30%), Positives = 240/436 (55%), Gaps = 6/436 (1%)
Query: 21 PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
P + F+ L + + AL ++ + G +++T + ++N CR +A +
Sbjct: 86 PTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMINCFCRCRKLCLAFSA 145
Query: 81 FEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSV 140
++ + G EPNT+T++T+I+GLC EG V +A EL+ +M + KP+++T ++
Sbjct: 146 MGKII----KLGY--EPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTL 199
Query: 141 IRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGV 200
+ G C + EA L +M++ G QPN VT+ +++ +CK+G+ A LL M + +
Sbjct: 200 VNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNI 259
Query: 201 RPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALS 260
+ DA Y+ ++DG C G +++A LF ME G + +Y+ILI G+C +
Sbjct: 260 KLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAK 319
Query: 261 LYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLC 320
L +M+ + I P+VV + L + ++ A +L EM G+A DT TY + IDG C
Sbjct: 320 LLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFC 379
Query: 321 KNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVV 380
K ++ +A ++ + C+ +IR +N LI+G CK+ R++ LELFR + +V + V
Sbjct: 380 KENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTV 439
Query: 381 TYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKM 440
TY+ +I G C G+++ A++LF +M V PN++T+ +L+ G E K +E+ K+
Sbjct: 440 TYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKI 499
Query: 441 KEINVMPDASIVSIVV 456
++ + D I +I++
Sbjct: 500 EKSKMELDIGIYNIII 515
Score = 192 bits (487), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 127/467 (27%), Positives = 230/467 (49%), Gaps = 7/467 (1%)
Query: 17 SCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIV 76
S F+ +++ ++ + + +A LF + P V ++ L + + +T +
Sbjct: 47 SAFSDRNLSYRERLRSGLVDIKADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDL 106
Query: 77 ALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVT 136
L L ++M E + N T + +I+ C+ + A + ++ +PN +T
Sbjct: 107 VLALCKQM-----ELKGIAH-NLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTIT 160
Query: 137 YTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 196
++++I G C +EA L M++ G +P+++T N +++ LC +GK EA L+D M+
Sbjct: 161 FSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMV 220
Query: 197 QHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIE 256
++G +P+A TY +L+ C +G+ A EL ME K YSI+I+G CK+ ++
Sbjct: 221 EYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLD 280
Query: 257 GALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFI 316
A +L++EM KGI +++ +N L G + + KL +M + + + T+ I
Sbjct: 281 NAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLI 340
Query: 317 DGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLV 376
D K G + EA EL + D Y SLIDG CK L+ A ++ +
Sbjct: 341 DSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCD 400
Query: 377 PNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIEL 436
PN+ T++I+I G C ++D +LF M VV + +T++ LI+GF + + + EL
Sbjct: 401 PNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKEL 460
Query: 437 LHKMKEINVMPDASIVSIVVDLLAKNEISLNSLPSF-TVHEQQEEVD 482
+M V P+ I++D L N S +L F + + + E+D
Sbjct: 461 FQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELD 507
>sp|Q9C8T7|PP101_ARATH Pentatricopeptide repeat-containing protein At1g63330
OS=Arabidopsis thaliana GN=At1g63330 PE=2 SV=2
Length = 559
Score = 334 bits (857), Expect = 8e-91, Method: Compositional matrix adjust.
Identities = 169/457 (36%), Positives = 273/457 (59%), Gaps = 6/457 (1%)
Query: 3 RVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYT 62
R+S ++ ++++ + PD +TFT+LI GL ++ EA AL ++ GC+P++ TY
Sbjct: 95 RISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYG 154
Query: 63 TLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELL 122
+VNGLC+ +A NL +M E + V + TIID LCK VD A L
Sbjct: 155 VVVNGLCKRGDIDLAFNLLNKMEAAK------IEADVVIFNTIIDSLCKYRHVDDALNLF 208
Query: 123 LQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKN 182
+M+ K I+PNVVTY+S+I C W++A +L +M+++ + PN+VTFN ++D K
Sbjct: 209 KEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKE 268
Query: 183 GKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSY 242
GK EA +L D MI+ + PD FTYN+L++GFC+ R++ AK++F M S C + +Y
Sbjct: 269 GKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTY 328
Query: 243 SILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQR 302
+ LI G+CK+K +E L+ EM +G+ D V + TL GLF + A K+F +M
Sbjct: 329 NTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVS 388
Query: 303 NGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEI 362
+GV D TY +DGLC NG + +A+E+F ++ + + DI Y ++I+G+CK+G+++
Sbjct: 389 DGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDD 448
Query: 363 ALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIR 422
+LF SL + PNVVTY+ MI GLC+ + +A L M+E+ +P+ T++ LIR
Sbjct: 449 GWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIR 508
Query: 423 GFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLL 459
+R + + EL+ +M+ + DAS + +V ++L
Sbjct: 509 AHLRDGDKAASAELIREMRSCRFVGDASTIGLVANML 545
Score = 231 bits (589), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 137/448 (30%), Positives = 232/448 (51%), Gaps = 6/448 (1%)
Query: 14 ILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSH 73
++KS P F L+ + + +L K++ G +++TY L+N CR S
Sbjct: 1 MVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQ 60
Query: 74 TIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPN 133
+AL L +M + G EP+ VT +++++G C + A L+ QM + +P+
Sbjct: 61 ISLALALLGKMM----KLGY--EPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPD 114
Query: 134 VVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLD 193
+T+T++I G +EA L M+ +G QPN+VT+ V+++ LCK G +D A LL+
Sbjct: 115 TITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLN 174
Query: 194 LMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNK 253
M + D +NT++D C V+ A LF ME+ G + V +YS LI+ C
Sbjct: 175 KMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYG 234
Query: 254 EIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYR 313
A L S+M+ K I P++V N L + + A KL D+M + + D +TY
Sbjct: 235 RWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYN 294
Query: 314 TFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCG 373
+ I+G C + + +A ++F + C D+ YN+LI G CKS R+E ELFR +
Sbjct: 295 SLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHR 354
Query: 374 VLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKV 433
LV + VTY+ +I GL +DG D A+ +F M + V P+++T+ +L+ G + K
Sbjct: 355 GLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKA 414
Query: 434 IELLHKMKEINVMPDASIVSIVVDLLAK 461
+E+ M++ + D I + +++ + K
Sbjct: 415 LEVFDYMQKSEIKLDIYIYTTMIEGMCK 442
Score = 197 bits (502), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 117/424 (27%), Positives = 215/424 (50%), Gaps = 6/424 (1%)
Query: 56 PDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFV 115
P +F + L++ + + + ++L E+M G+ N TY +I+ C+ +
Sbjct: 8 PSIFEFNKLLSAIAKMKKFDLVISLGEKMQ----RLGI--SHNLYTYNILINCFCRRSQI 61
Query: 116 DKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVI 175
A LL +M +P++VT +S++ G+C+ K ++A L +M++ G +P+ +TF +
Sbjct: 62 SLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTL 121
Query: 176 MDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGC 235
+ L + K EA L+D M+Q G +P+ TY +++G C G ++ A L ME+
Sbjct: 122 IHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKI 181
Query: 236 KHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFK 295
+ V ++ +I+ CK + ++ AL+L+ EM +KGI+P+VV +++L L + A +
Sbjct: 182 EADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQ 241
Query: 296 LFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLC 355
L +M + + T+ ID K G VEA +L + + DI YNSLI+G C
Sbjct: 242 LLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFC 301
Query: 356 KSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVI 415
RL+ A ++F + P++ TY+ +I G C +++ +LF +M +V + +
Sbjct: 302 MHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTV 361
Query: 416 TFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEISLNSLPSFTVH 475
T+ LI+G + ++ +M V PD SI++D L N +L F
Sbjct: 362 TYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYM 421
Query: 476 EQQE 479
++ E
Sbjct: 422 QKSE 425
Score = 195 bits (496), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 119/404 (29%), Positives = 203/404 (50%), Gaps = 10/404 (2%)
Query: 2 GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
G + F +L ++ + D V F ++I LC + +A LF ++ G P+V TY
Sbjct: 164 GDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTY 223
Query: 62 TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
++L++ LC A L +M PN VT+ +ID KEG +A++L
Sbjct: 224 SSLISCLCSYGRWSDASQLLSDMIEKK------INPNLVTFNALIDAFVKEGKFVEAEKL 277
Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
M ++I P++ TY S+I GFC ++AK++F M+ + P++ T+N ++ CK
Sbjct: 278 HDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCK 337
Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
+ ++++ + L M G+ D TY TL+ G G ++A+++F M S G + +
Sbjct: 338 SKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMT 397
Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
YSIL++G C N ++E AL ++ M IK D+ I+ T+ G+ + +V+ + LF +
Sbjct: 398 YSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLS 457
Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
GV + TY T I GLC + EA L ++ D YN+LI + G
Sbjct: 458 LKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKA 517
Query: 362 IALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDM 405
+ EL R + V + T ++ + +DG++DK+ FLDM
Sbjct: 518 ASAELIREMRSCRFVGDASTIG-LVANMLHDGRLDKS---FLDM 557
>sp|Q9SXD1|PPR91_ARATH Pentatricopeptide repeat-containing protein At1g62670,
mitochondrial OS=Arabidopsis thaliana GN=At1g62670 PE=2
SV=2
Length = 630
Score = 334 bits (856), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 168/457 (36%), Positives = 270/457 (59%), Gaps = 6/457 (1%)
Query: 3 RVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYT 62
R+S ++ ++ + + P+ VTF +LI GL ++ EA AL ++ GC+PD+ TY
Sbjct: 166 RISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYG 225
Query: 63 TLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELL 122
+VNGLC+ T +A NL +M G EP + Y TIIDGLCK +D A L
Sbjct: 226 VVVNGLCKRGDTDLAFNLLNKMEQGK------LEPGVLIYNTIIDGLCKYKHMDDALNLF 279
Query: 123 LQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKN 182
+M+ K I+PNVVTY+S+I C W++A RL +M+++ + P+V TF+ ++D K
Sbjct: 280 KEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKE 339
Query: 183 GKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSY 242
GK+ EA +L D M++ + P TY++L++GFC+ R++ AK++F M S C V +Y
Sbjct: 340 GKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTY 399
Query: 243 SILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQR 302
+ LI G+CK K +E + ++ EM +G+ + V +N L GLF+ + A ++F EM
Sbjct: 400 NTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVS 459
Query: 303 NGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEI 362
+GV + TY T +DGLCKNG + +A+ +F L+ K E I YN +I+G+CK+G++E
Sbjct: 460 DGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVED 519
Query: 363 ALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIR 422
+LF +L + P+VV Y+ MI G C G ++A LF +M+E+ +PN ++ LIR
Sbjct: 520 GWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIR 579
Query: 423 GFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLL 459
+R + EL+ +M+ DAS + +V ++L
Sbjct: 580 ARLRDGDREASAELIKEMRSCGFAGDASTIGLVTNML 616
Score = 234 bits (596), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 136/459 (29%), Positives = 237/459 (51%), Gaps = 6/459 (1%)
Query: 3 RVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYT 62
++ + G ++KS P + F+ L+ + ++ +L +++ G + +TY+
Sbjct: 61 KLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYS 120
Query: 63 TLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELL 122
L+N CR S +AL + +M + EPN VT +++++G C + +A L+
Sbjct: 121 ILINCFCRRSQLPLALAVLGKMMK------LGYEPNIVTLSSLLNGYCHSKRISEAVALV 174
Query: 123 LQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKN 182
QM +PN VT+ ++I G +EA L M+ +G QP++VT+ V+++ LCK
Sbjct: 175 DQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKR 234
Query: 183 GKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSY 242
G D A LL+ M Q + P YNT++DG C ++ A LF ME+ G + V +Y
Sbjct: 235 GDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTY 294
Query: 243 SILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQR 302
S LI+ C A L S+M+ + I PDV + L + ++ A KL+DEM +
Sbjct: 295 SSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVK 354
Query: 303 NGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEI 362
+ TY + I+G C + + EA ++F + C D+ YN+LI G CK R+E
Sbjct: 355 RSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEE 414
Query: 363 ALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIR 422
+E+FR + LV N VTY+I+I GL G D A+++F +M + V PN++T++ L+
Sbjct: 415 GMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLD 474
Query: 423 GFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
G + + K + + ++ + P +I+++ + K
Sbjct: 475 GLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCK 513
Score = 218 bits (554), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 128/428 (29%), Positives = 229/428 (53%), Gaps = 6/428 (1%)
Query: 35 AESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVV 94
+E ++ +A ALF ++ P + ++ L++ + + + V ++L E+M N G+
Sbjct: 58 SELKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQN----LGI- 112
Query: 95 CEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAK 154
N TY+ +I+ C+ + A +L +M +PN+VT +S++ G+C++K +EA
Sbjct: 113 -PHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAV 171
Query: 155 RLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGF 214
L +M G QPN VTFN ++ L + K EA L+D M+ G +PD TY +++G
Sbjct: 172 ALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGL 231
Query: 215 CLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDV 274
C G + A L ME + V Y+ +I+G CK K ++ AL+L+ EM +KGI+P+V
Sbjct: 232 CKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNV 291
Query: 275 VIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHT 334
V +++L L + A +L +M + D +T+ ID K G +VEA +L+
Sbjct: 292 VTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDE 351
Query: 335 LRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQ 394
+ + I Y+SLI+G C RL+ A ++F + P+VVTY+ +I G C +
Sbjct: 352 MVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKR 411
Query: 395 MDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSI 454
+++ ++F +M + +V N +T+++LI+G + + E+ +M V P+ +
Sbjct: 412 VEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNT 471
Query: 455 VVDLLAKN 462
++D L KN
Sbjct: 472 LLDGLCKN 479
Score = 195 bits (495), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 115/404 (28%), Positives = 205/404 (50%), Gaps = 10/404 (2%)
Query: 2 GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
G F +L ++ + P + + ++I GLC + +A LF ++ G P+V TY
Sbjct: 235 GDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTY 294
Query: 62 TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
++L++ LC A L +M P+ T++ +ID KEG + +A++L
Sbjct: 295 SSLISCLCNYGRWSDASRLLSDMIERK------INPDVFTFSALIDAFVKEGKLVEAEKL 348
Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
+M ++I P++VTY+S+I GFC +EAK++F M+ + P+VVT+N ++ CK
Sbjct: 349 YDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCK 408
Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
+++E + M Q G+ + TYN L+ G G + A+E+F M S G + +
Sbjct: 409 YKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMT 468
Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
Y+ L++G CKN ++E A+ ++ + ++P + +N + G+ + +VE + LF +
Sbjct: 469 YNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLS 528
Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
GV D Y T I G C+ G EA LF ++ + YN+LI + G E
Sbjct: 529 LKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDRE 588
Query: 362 IALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDM 405
+ EL + + + T ++ + +DG++DK+ FLDM
Sbjct: 589 ASAELIKEMRSCGFAGDASTIG-LVTNMLHDGRLDKS---FLDM 628
>sp|Q9ASZ8|PPR37_ARATH Pentatricopeptide repeat-containing protein At1g12620
OS=Arabidopsis thaliana GN=At1g12620 PE=2 SV=1
Length = 621
Score = 331 bits (849), Expect = 7e-90, Method: Compositional matrix adjust.
Identities = 179/491 (36%), Positives = 275/491 (56%), Gaps = 29/491 (5%)
Query: 3 RVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYT 62
++S F +G+I+K + PD VTF++LI GLC E R+ EA L ++ G +P + T
Sbjct: 122 KLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLN 181
Query: 63 TLVNGLCRTSHTIVALNLFEEMANGNGE---------FGVVCEP---------------- 97
LVNGLC A+ L + M + V+C+
Sbjct: 182 ALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEER 241
Query: 98 ----NTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEA 153
+ V Y+ IIDGLCK+G +D A L +M+ K K +++ YT++IRGFCYA W++
Sbjct: 242 KIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDG 301
Query: 154 KRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDG 213
+L +M+ + + P+VV F+ ++D K GK+ EA L MIQ G+ PD TY +L+DG
Sbjct: 302 AKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDG 361
Query: 214 FCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPD 273
FC +++ A + M S GC + +++ILINGYCK I+ L L+ +M +G+ D
Sbjct: 362 FCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVAD 421
Query: 274 VVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFH 333
V +NTL G E+ ++E A +LF EM V D +Y+ +DGLC NG +A+E+F
Sbjct: 422 TVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFE 481
Query: 334 TLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDG 393
+ K E DI YN +I G+C + +++ A +LF SLP + P+V TY+IMIGGLC G
Sbjct: 482 KIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKG 541
Query: 394 QMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVS 453
+ +A LF MEE+ PN T+++LIR + + +K +L+ ++K DAS V
Sbjct: 542 SLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFSVDASTVK 601
Query: 454 IVVDLLAKNEI 464
+VVD+L+ +
Sbjct: 602 MVVDMLSDGRL 612
Score = 227 bits (578), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 129/436 (29%), Positives = 233/436 (53%), Gaps = 6/436 (1%)
Query: 21 PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
P + F+ L + + L ++ + G +++T + ++N CR +A +
Sbjct: 70 PRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIMINCCCRCRKLSLAFSA 129
Query: 81 FEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSV 140
++ + G EP+TVT++T+I+GLC EG V +A EL+ +M + KP ++T ++
Sbjct: 130 MGKII----KLGY--EPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNAL 183
Query: 141 IRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGV 200
+ G C ++A L M++ G QPN VT+ ++ +CK+G+ A LL M + +
Sbjct: 184 VNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKI 243
Query: 201 RPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALS 260
+ DA Y+ ++DG C G +++A LF ME G K + Y+ LI G+C +
Sbjct: 244 KLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAK 303
Query: 261 LYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLC 320
L +M+ + I PDVV + L + ++ A +L EM + G++ DT TY + IDG C
Sbjct: 304 LLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFC 363
Query: 321 KNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVV 380
K + +A + + C +IR +N LI+G CK+ ++ LELFR + +V + V
Sbjct: 364 KENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTV 423
Query: 381 TYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKM 440
TY+ +I G C G+++ A++LF +M V P+++++ +L+ G EP K +E+ K+
Sbjct: 424 TYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKI 483
Query: 441 KEINVMPDASIVSIVV 456
++ + D I +I++
Sbjct: 484 EKSKMELDIGIYNIII 499
Score = 166 bits (421), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 98/357 (27%), Positives = 180/357 (50%)
Query: 116 DKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVI 175
D A +L +M +P ++ ++ + K ++ L +M +G+ N+ T +++
Sbjct: 54 DDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIM 113
Query: 176 MDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGC 235
++ C+ K+ A + +I+ G PD T++TL++G CL GRV+ A EL M MG
Sbjct: 114 INCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGH 173
Query: 236 KHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFK 295
K T+ + + L+NG C N ++ A+ L M+ G +P+ V + + + + Q A +
Sbjct: 174 KPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAME 233
Query: 296 LFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLC 355
L +M+ + D Y IDGLCK+G + A LF+ + I + DI Y +LI G C
Sbjct: 234 LLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFC 293
Query: 356 KSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVI 415
+GR + +L R + + P+VV +S +I +G++ +A +L +M + + P+ +
Sbjct: 294 YAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTV 353
Query: 416 TFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEISLNSLPSF 472
T+ LI GF + N+ K +L M P+ +I+++ K + + L F
Sbjct: 354 TYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELF 410
Score = 129 bits (324), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 85/327 (25%), Positives = 148/327 (45%)
Query: 135 VTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDL 194
V+Y +R ++A LF EM +P ++ F+ + + + + D L
Sbjct: 38 VSYRERLRSGIVDIKEDDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQ 97
Query: 195 MIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKE 254
M G+ + +T + +++ C +++ A + +G + ++S LING C
Sbjct: 98 MELKGIAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGR 157
Query: 255 IEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRT 314
+ AL L M+ G KP ++ N L GL +V A L D M G + TY
Sbjct: 158 VSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGP 217
Query: 315 FIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGV 374
+ +CK+G A+EL + K + D Y+ +IDGLCK G L+ A LF +
Sbjct: 218 VLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKG 277
Query: 375 LVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVI 434
+++ Y+ +I G C G+ D L DM + + P+V+ F LI F++ + +
Sbjct: 278 FKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAE 337
Query: 435 ELLHKMKEINVMPDASIVSIVVDLLAK 461
EL +M + + PD + ++D K
Sbjct: 338 ELHKEMIQRGISPDTVTYTSLIDGFCK 364
>sp|Q6NQ83|PP247_ARATH Pentatricopeptide repeat-containing protein At3g22470,
mitochondrial OS=Arabidopsis thaliana GN=At3g22470 PE=2
SV=1
Length = 619
Score = 331 bits (848), Expect = 8e-90, Method: Compositional matrix adjust.
Identities = 169/463 (36%), Positives = 276/463 (59%), Gaps = 6/463 (1%)
Query: 2 GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
GRVS ++ R+++ PD VT ++LI GLC + R+ EA L ++ +G +PD TY
Sbjct: 154 GRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTY 213
Query: 62 TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
++N LC++ ++ +AL+LF +M N + + V Y+ +ID LCK+G D A L
Sbjct: 214 GPVLNRLCKSGNSALALDLFRKMEERN------IKASVVQYSIVIDSLCKDGSFDDALSL 267
Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
+M+ K IK +VVTY+S+I G C W++ ++ EM+ + + P+VVTF+ ++D K
Sbjct: 268 FNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVK 327
Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
GK+ EA L + MI G+ PD TYN+L+DGFC ++ A ++F M S GC+ + +
Sbjct: 328 EGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVT 387
Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
YSILIN YCK K ++ + L+ E+ SKG+ P+ + +NTL +G + ++ A +LF EM
Sbjct: 388 YSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMV 447
Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
GV TY +DGLC NG + +A+E+F ++ + I YN +I G+C + +++
Sbjct: 448 SRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVD 507
Query: 362 IALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLI 421
A LF SL + P+VVTY++MIGGLC G + +A LF M+E+ P+ T+++LI
Sbjct: 508 DAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILI 567
Query: 422 RGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEI 464
R + + +EL+ +MK D+S + +V+D+L+ +
Sbjct: 568 RAHLGGSGLISSVELIEEMKVCGFSADSSTIKMVIDMLSDRRL 610
Score = 235 bits (599), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 134/455 (29%), Positives = 241/455 (52%), Gaps = 8/455 (1%)
Query: 3 RVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTK-LRVFGCEPDVFTY 61
+V+ + +++S P + F L + A ++ + F K + + G E D++T
Sbjct: 50 KVNDAIDLFESMIQSRPLPTPIDFNRLCSAV-ARTKQYDLVLGFCKGMELNGIEHDMYTM 108
Query: 62 TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
T ++N CR + A ++ + + EP+T+T++T+++G C EG V +A L
Sbjct: 109 TIMINCYCRKKKLLFAFSVLGR------AWKLGYEPDTITFSTLVNGFCLEGRVSEAVAL 162
Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
+ +M + +P++VT +++I G C +EA L M++ G QP+ VT+ +++ LCK
Sbjct: 163 VDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCK 222
Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
+G A L M + ++ Y+ ++D C G + A LF ME G K V +
Sbjct: 223 SGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVT 282
Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
YS LI G C + + + + EM+ + I PDVV + L + ++ A +L++EM
Sbjct: 283 YSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMI 342
Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
G+A DT TY + IDG CK + EA ++F + CE DI Y+ LI+ CK+ R++
Sbjct: 343 TRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVD 402
Query: 362 IALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLI 421
+ LFR + L+PN +TY+ ++ G C G+++ A++LF +M V P+V+T+ +L+
Sbjct: 403 DGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILL 462
Query: 422 RGFIRINEPSKVIELLHKMKEINVMPDASIVSIVV 456
G E +K +E+ KM++ + I +I++
Sbjct: 463 DGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIII 497
Score = 203 bits (516), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 130/447 (29%), Positives = 223/447 (49%), Gaps = 8/447 (1%)
Query: 17 SCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIV 76
S T +++ ++ + ++ +A LF + P + L + + RT +
Sbjct: 29 SSITEAKLSYKERLRNGIVDIKVNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDL 88
Query: 77 ALNLFEEMA-NGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVV 135
L + M NG E + T T +I+ C++ + A +L + +P+ +
Sbjct: 89 VLGFCKGMELNG-------IEHDMYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTI 141
Query: 136 TYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLM 195
T+++++ GFC +EA L M++ +P++VT + +++ LC G++ EA L+D M
Sbjct: 142 TFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRM 201
Query: 196 IQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEI 255
+++G +PD TY +L+ C +G A +LF ME K +V YSI+I+ CK+
Sbjct: 202 VEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSF 261
Query: 256 EGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTF 315
+ ALSL++EM KGIK DVV +++L GL + + K+ EM + D T+
Sbjct: 262 DDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSAL 321
Query: 316 IDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVL 375
ID K G ++EA EL++ + D YNSLIDG CK L A ++F +
Sbjct: 322 IDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGC 381
Query: 376 VPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIE 435
P++VTYSI+I C ++D LF ++ ++PN IT++ L+ GF + + + E
Sbjct: 382 EPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKE 441
Query: 436 LLHKMKEINVMPDASIVSIVVDLLAKN 462
L +M V P I++D L N
Sbjct: 442 LFQEMVSRGVPPSVVTYGILLDGLCDN 468
Score = 74.7 bits (182), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/225 (24%), Positives = 100/225 (44%)
Query: 254 EIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYR 313
++ A+ L+ M+ P + N L + Q + M+ NG+ D +T
Sbjct: 50 KVNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMT 109
Query: 314 TFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCG 373
I+ C+ ++ A + L E D +++L++G C GR+ A+ L +
Sbjct: 110 IMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEM 169
Query: 374 VLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKV 433
P++VT S +I GLC G++ +A L M E P+ +T+ ++ + +
Sbjct: 170 KQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALA 229
Query: 434 IELLHKMKEINVMPDASIVSIVVDLLAKNEISLNSLPSFTVHEQQ 478
++L KM+E N+ SIV+D L K+ ++L F E +
Sbjct: 230 LDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMK 274
>sp|Q9CAM8|PP100_ARATH Pentatricopeptide repeat-containing protein At1g63150
OS=Arabidopsis thaliana GN=At1g63150 PE=2 SV=1
Length = 629
Score = 328 bits (841), Expect = 6e-89, Method: Compositional matrix adjust.
Identities = 172/457 (37%), Positives = 271/457 (59%), Gaps = 9/457 (1%)
Query: 3 RVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYT 62
R+S ++ ++++ + PD TFT+LI GL ++ EA AL ++ GC+PD+ TY
Sbjct: 168 RISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYG 227
Query: 63 TLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELL 122
T+VNGLC+ +ALNL +M + N V + TIID LCK V+ A +L
Sbjct: 228 TVVNGLCKRGDIDLALNLLNKMEAAR------IKANVVIFNTIIDSLCKYRHVEVAVDLF 281
Query: 123 LQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKN 182
+M+ K I+PNVVTY S+I C W++A RL M+++ + PNVVTFN ++D K
Sbjct: 282 TEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKE 341
Query: 183 GKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSY 242
GK+ EA +L + MIQ + PD TYN L++GFC+ R++ AK++F M S C + +Y
Sbjct: 342 GKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTY 401
Query: 243 SILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQR 302
+ LING+CK K +E + L+ EM +G+ + V + T+ G F+ + A +F +M
Sbjct: 402 NTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVS 461
Query: 303 NGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEI 362
N V D TY + GLC G + A+ +F L+ + E +I YN++I+G+CK+G++
Sbjct: 462 NRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGE 521
Query: 363 ALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIR 422
A +LF SL + P+VVTY+ MI GLC+ + +A DLF M+E+ +PN T++ LIR
Sbjct: 522 AWDLFCSLS---IKPDVVTYNTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLIR 578
Query: 423 GFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLL 459
+R + + EL+ +M+ + DAS +S+V ++L
Sbjct: 579 ANLRDCDRAASAELIKEMRSSGFVGDASTISLVTNML 615
Score = 224 bits (572), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 133/422 (31%), Positives = 219/422 (51%), Gaps = 6/422 (1%)
Query: 3 RVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYT 62
+V + G ++KS P V F L+ + ++ +L +++ G D++TY+
Sbjct: 63 KVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYS 122
Query: 63 TLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELL 122
+N CR S +AL + +M + G EP+ VT +++++G C + A L+
Sbjct: 123 IFINCFCRRSQLSLALAVLAKMM----KLGY--EPDIVTLSSLLNGYCHSKRISDAVALV 176
Query: 123 LQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKN 182
QM + KP+ T+T++I G +EA L +M+ +G QP++VT+ +++ LCK
Sbjct: 177 DQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKR 236
Query: 183 GKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSY 242
G +D A LL+ M ++ + +NT++D C V A +LF ME+ G + V +Y
Sbjct: 237 GDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTY 296
Query: 243 SILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQR 302
+ LIN C A L S ML K I P+VV N L F+ ++ A KL +EM +
Sbjct: 297 NSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQ 356
Query: 303 NGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEI 362
+ DT TY I+G C + + EA ++F + C +I+ YN+LI+G CK R+E
Sbjct: 357 RSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVED 416
Query: 363 ALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIR 422
+ELFR + LV N VTY+ +I G G D A+ +F M N V +++T+ +L+
Sbjct: 417 GVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLH 476
Query: 423 GF 424
G
Sbjct: 477 GL 478
Score = 175 bits (444), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 112/404 (27%), Positives = 200/404 (49%), Gaps = 13/404 (3%)
Query: 2 GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
G + +L ++ + + V F ++I LC + A LFT++ G P+V TY
Sbjct: 237 GDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTY 296
Query: 62 TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
+L+N LC A L M PN VT+ +ID KEG + +A++L
Sbjct: 297 NSLINCLCNYGRWSDASRLLSNMLEKK------INPNVVTFNALIDAFFKEGKLVEAEKL 350
Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
+M ++I P+ +TY +I GFC +EAK++F M+ + PN+ T+N +++ CK
Sbjct: 351 HEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCK 410
Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
++++ L M Q G+ + TY T++ GF G + A+ +F M S + +
Sbjct: 411 CKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMT 470
Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
YSIL++G C +++ AL ++ + ++ ++ I+NT+ G+ + +V A+ LF +
Sbjct: 471 YSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDLFCSL- 529
Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
+ D TY T I GLC + EA +LF ++ + YN+LI +
Sbjct: 530 --SIKPDVVTYNTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLIRANLRDCDRA 587
Query: 362 IALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDM 405
+ EL + + V + T S ++ + +DG++DK+ FL+M
Sbjct: 588 ASAELIKEMRSSGFVGDASTIS-LVTNMLHDGRLDKS---FLNM 627
>sp|Q9LPX2|PPR39_ARATH Pentatricopeptide repeat-containing protein At1g12775,
mitochondrial OS=Arabidopsis thaliana GN=At1g12775 PE=2
SV=1
Length = 644
Score = 316 bits (809), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 171/497 (34%), Positives = 271/497 (54%), Gaps = 41/497 (8%)
Query: 3 RVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYT 62
++S+ F +G+I+K + PD V F +L+ GLC E R+ EA L ++ G +P + T
Sbjct: 138 KLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLN 197
Query: 63 TLVNGLC-----------------------------------RTSHTIVALNLFEEMANG 87
TLVNGLC ++ T +A+ L +M
Sbjct: 198 TLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEER 257
Query: 88 NGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYA 147
N + + V Y+ IIDGLCK+G +D A L +M+ K K +++TY ++I GFC A
Sbjct: 258 NIKL------DAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNA 311
Query: 148 KDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTY 207
W++ +L +M+ + + PNVVTF+V++D K GK+ EA +LL M+Q G+ P+ TY
Sbjct: 312 GRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITY 371
Query: 208 NTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLS 267
N+L+DGFC R+ A ++ M S GC + +++ILINGYCK I+ L L+ EM
Sbjct: 372 NSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSL 431
Query: 268 KGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVE 327
+G+ + V +NTL G + ++E A KLF EM V D +Y+ +DGLC NG + +
Sbjct: 432 RGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEK 491
Query: 328 AVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIG 387
A+E+F + K E DI Y +I G+C + +++ A +LF SLP + + Y+IMI
Sbjct: 492 ALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMIS 551
Query: 388 GLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMP 447
LC + KA LF M E P+ +T+++LIR + ++ + EL+ +MK
Sbjct: 552 ELCRKDSLSKADILFRKMTEEGHAPDELTYNILIRAHLGDDDATTAAELIEEMKSSGFPA 611
Query: 448 DASIVSIVVDLLAKNEI 464
D S V +V+++L+ E+
Sbjct: 612 DVSTVKMVINMLSSGEL 628
Score = 246 bits (628), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 131/420 (31%), Positives = 226/420 (53%), Gaps = 6/420 (1%)
Query: 2 GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
G+VS V++ R++++ F P+ VT+ ++ +C + A L K+ + D Y
Sbjct: 207 GKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKY 266
Query: 62 TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
+ +++GLC+ A NLF EM + + +TY T+I G C G D +L
Sbjct: 267 SIIIDGLCKDGSLDNAFNLFNEMEIKG------FKADIITYNTLIGGFCNAGRWDDGAKL 320
Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
L M + I PNVVT++ +I F EA +L EMM +G+ PN +T+N ++D CK
Sbjct: 321 LRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCK 380
Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
+++EA +++DLMI G PD T+N L++G+C R++ ELF M G +
Sbjct: 381 ENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVT 440
Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
Y+ L+ G+C++ ++E A L+ EM+S+ ++PD+V + L GL + ++E+A ++F +++
Sbjct: 441 YNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIE 500
Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
++ + D Y I G+C + +A +LF +L + + D RAYN +I LC+ L
Sbjct: 501 KSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLS 560
Query: 362 IALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLI 421
A LFR + P+ +TY+I+I D A +L +M+ + +V T M+I
Sbjct: 561 KADILFRKMTEEGHAPDELTYNILIRAHLGDDDATTAAELIEEMKSSGFPADVSTVKMVI 620
Score = 230 bits (587), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 126/436 (28%), Positives = 229/436 (52%), Gaps = 6/436 (1%)
Query: 21 PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
P + F L + + AL ++ G ++T + ++N CR A +
Sbjct: 86 PTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIMINCFCRCRKLSYAFST 145
Query: 81 FEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSV 140
++ + G EP+TV + T+++GLC E V +A EL+ +M + KP ++T ++
Sbjct: 146 MGKIM----KLGY--EPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTL 199
Query: 141 IRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGV 200
+ G C ++A L M++ G QPN VT+ +++ +CK+G+ A LL M + +
Sbjct: 200 VNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNI 259
Query: 201 RPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALS 260
+ DA Y+ ++DG C G +++A LF ME G K + +Y+ LI G+C +
Sbjct: 260 KLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAK 319
Query: 261 LYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLC 320
L +M+ + I P+VV + L + ++ A +L EM + G+A +T TY + IDG C
Sbjct: 320 LLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFC 379
Query: 321 KNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVV 380
K + EA+++ + C+ DI +N LI+G CK+ R++ LELFR + ++ N V
Sbjct: 380 KENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTV 439
Query: 381 TYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKM 440
TY+ ++ G C G+++ A+ LF +M V P+++++ +L+ G E K +E+ K+
Sbjct: 440 TYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKI 499
Query: 441 KEINVMPDASIVSIVV 456
++ + D I I++
Sbjct: 500 EKSKMELDIGIYMIII 515
Score = 176 bits (447), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 99/343 (28%), Positives = 173/343 (50%)
Query: 115 VDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNV 174
D A +L M P V+ + + K + L +M +G+ ++ T ++
Sbjct: 69 ADDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSI 128
Query: 175 IMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMG 234
+++ C+ K+ A + +++ G PD +NTLL+G CL RV+ A EL M MG
Sbjct: 129 MINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMG 188
Query: 235 CKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAF 294
K T+ + + L+NG C N ++ A+ L M+ G +P+ V + + + + Q A
Sbjct: 189 HKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAM 248
Query: 295 KLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGL 354
+L +M+ + D Y IDGLCK+G + A LF+ + I + DI YN+LI G
Sbjct: 249 ELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGF 308
Query: 355 CKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNV 414
C +GR + +L R + + PNVVT+S++I +G++ +A L +M + + PN
Sbjct: 309 CNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNT 368
Query: 415 ITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVD 457
IT++ LI GF + N + I+++ M PD +I+++
Sbjct: 369 ITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILIN 411
Score = 169 bits (428), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 92/335 (27%), Positives = 172/335 (51%), Gaps = 6/335 (1%)
Query: 2 GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
GR G +L ++K +P+ VTF+ LI E ++ EA L ++ G P+ TY
Sbjct: 312 GRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITY 371
Query: 62 TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
+L++G C+ + A+ + + M + C+P+ +T+ +I+G CK +D EL
Sbjct: 372 NSLIDGFCKENRLEEAIQMVDLMISKG------CDPDIMTFNILINGYCKANRIDDGLEL 425
Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
+M + + N VTY ++++GFC + AK+LF EM+ + V+P++V++ +++D LC
Sbjct: 426 FREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCD 485
Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
NG++++A + + + + D Y ++ G C +V+ A +LF S+ G K +
Sbjct: 486 NGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARA 545
Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
Y+I+I+ C+ + A L+ +M +G PD + +N L A +L +EM+
Sbjct: 546 YNIMISELCRKDSLSKADILFRKMTEEGHAPDELTYNILIRAHLGDDDATTAAELIEEMK 605
Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLR 336
+G AD T + I+ L +++ T R
Sbjct: 606 SSGFPADVSTVKMVINMLSSGELDKSFLDMLSTTR 640
Score = 144 bits (362), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 86/311 (27%), Positives = 150/311 (48%)
Query: 151 NEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTL 210
++A LF +M+ P V+ FN + + K + + L M G+ +T + +
Sbjct: 70 DDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIM 129
Query: 211 LDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGI 270
++ FC ++++A + +G + ++ L+NG C + AL L M+ G
Sbjct: 130 INCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGH 189
Query: 271 KPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVE 330
KP ++ NTL GL +V A L D M G + TY ++ +CK+G A+E
Sbjct: 190 KPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAME 249
Query: 331 LFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLC 390
L + + D Y+ +IDGLCK G L+ A LF + +++TY+ +IGG C
Sbjct: 250 LLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFC 309
Query: 391 NDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDAS 450
N G+ D L DM + + PNV+TF +LI F++ + + +LL +M + + P+
Sbjct: 310 NAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTI 369
Query: 451 IVSIVVDLLAK 461
+ ++D K
Sbjct: 370 TYNSLIDGFCK 380
Score = 142 bits (358), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 88/278 (31%), Positives = 139/278 (50%)
Query: 184 KMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYS 243
K D+A L MIQ P +N L T + L MES G H++++ S
Sbjct: 68 KADDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLS 127
Query: 244 ILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRN 303
I+IN +C+ +++ A S +++ G +PD VI NTL GL +V A +L D M
Sbjct: 128 IMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEM 187
Query: 304 GVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIA 363
G T T ++GLC NG + +AV L + + + Y +++ +CKSG+ +A
Sbjct: 188 GHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALA 247
Query: 364 LELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRG 423
+EL R + + + V YSI+I GLC DG +D A +LF +ME ++IT++ LI G
Sbjct: 248 MELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGG 307
Query: 424 FIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
F +LL M + + P+ S+++D K
Sbjct: 308 FCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVK 345
>sp|Q9SH26|PP102_ARATH Pentatricopeptide repeat-containing protein At1g63400
OS=Arabidopsis thaliana GN=At1g63400 PE=2 SV=1
Length = 577
Score = 312 bits (800), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 156/411 (37%), Positives = 247/411 (60%), Gaps = 6/411 (1%)
Query: 3 RVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYT 62
R+S ++ ++++ + PD +TFT+LI GL ++ EA AL ++ GC+P++ TY
Sbjct: 170 RISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYG 229
Query: 63 TLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELL 122
+VNGLC+ +A NL +M E N V Y+T+ID LCK D A L
Sbjct: 230 VVVNGLCKRGDIDLAFNLLNKMEAAK------IEANVVIYSTVIDSLCKYRHEDDALNLF 283
Query: 123 LQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKN 182
+M++K ++PNV+TY+S+I C + W++A RL +M+++ + PNVVTFN ++D K
Sbjct: 284 TEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKE 343
Query: 183 GKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSY 242
GK+ EA +L D MI+ + PD FTY++L++GFC+ R++ AK +F M S C V +Y
Sbjct: 344 GKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTY 403
Query: 243 SILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQR 302
+ LING+CK K I+ + L+ EM +G+ + V + TL G F+ + A +F +M
Sbjct: 404 NTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVS 463
Query: 303 NGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEI 362
+GV + TY T +DGLCKNG + +A+ +F L+ K E I YN +I+G+CK+G++E
Sbjct: 464 DGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVED 523
Query: 363 ALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPN 413
+LF SL + P+V+ Y+ MI G C G ++A LF M E+ +P+
Sbjct: 524 GWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKMREDGPLPD 574
Score = 287 bits (735), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 155/447 (34%), Positives = 251/447 (56%), Gaps = 6/447 (1%)
Query: 3 RVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYT 62
++S +LG+++K + P VT +SL+ G C RI +A AL ++ G PD T+T
Sbjct: 135 QISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFT 194
Query: 63 TLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELL 122
TL++GL + A+ L + M C+PN VTY +++GLCK G +D A LL
Sbjct: 195 TLIHGLFLHNKASEAVALVDRMVQRG------CQPNLVTYGVVVNGLCKRGDIDLAFNLL 248
Query: 123 LQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKN 182
+M+ I+ NVV Y++VI C + ++A LF EM ++GV+PNV+T++ ++ LC
Sbjct: 249 NKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNY 308
Query: 183 GKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSY 242
+ +ASRLL MI+ + P+ T+N L+D F G++ A++L+ M +F+Y
Sbjct: 309 ERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTY 368
Query: 243 SILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQR 302
S LING+C + ++ A ++ M+SK P+VV +NTL G + +++ +LF EM +
Sbjct: 369 SSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQ 428
Query: 303 NGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEI 362
G+ +T TY T I G + A +F + +I YN+L+DGLCK+G+LE
Sbjct: 429 RGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEK 488
Query: 363 ALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIR 422
A+ +F L + P + TY+IMI G+C G+++ DLF + V P+VI ++ +I
Sbjct: 489 AMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMIS 548
Query: 423 GFIRINEPSKVIELLHKMKEINVMPDA 449
GF R + L KM+E +PD+
Sbjct: 549 GFCRKGLKEEADALFRKMREDGPLPDS 575
Score = 223 bits (567), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 132/452 (29%), Positives = 232/452 (51%), Gaps = 6/452 (1%)
Query: 10 VLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLC 69
+ G ++KS P F L+ + + +L K++ G +++TY L+N C
Sbjct: 72 LFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFC 131
Query: 70 RTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKN 129
R S +AL L +M + G EP+ VT +++++G C + A L+ QM +
Sbjct: 132 RRSQISLALALLGKMM----KLGY--EPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMG 185
Query: 130 IKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEAS 189
+P+ +T+T++I G +EA L M+ +G QPN+VT+ V+++ LCK G +D A
Sbjct: 186 YRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAF 245
Query: 190 RLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGY 249
LL+ M + + Y+T++D C + A LF ME+ G + V +YS LI+
Sbjct: 246 NLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCL 305
Query: 250 CKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADT 309
C + A L S+M+ + I P+VV N L + ++ A KL+DEM + + D
Sbjct: 306 CNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDI 365
Query: 310 WTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRS 369
+TY + I+G C + + EA +F + C ++ YN+LI+G CK+ R++ +ELFR
Sbjct: 366 FTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFRE 425
Query: 370 LPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINE 429
+ LV N VTY+ +I G D A+ +F M + V PN++T++ L+ G + +
Sbjct: 426 MSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGK 485
Query: 430 PSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
K + + ++ + P +I+++ + K
Sbjct: 486 LEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCK 517
Score = 207 bits (527), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 124/456 (27%), Positives = 230/456 (50%), Gaps = 10/456 (2%)
Query: 7 GFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVN 66
G GR F+ + + +++ ++ +A LF + P +F + L++
Sbjct: 38 GMCYWGR----AFSSGSGDYREILRNGLHSMKLDDAIGLFGGMVKSRPLPSIFEFNKLLS 93
Query: 67 GLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMK 126
+ + + ++L E+M G+ N TY +I+ C+ + A LL +M
Sbjct: 94 AIAKMKKFDLVISLGEKMQ----RLGI--SHNLYTYNILINCFCRRSQISLALALLGKMM 147
Query: 127 DKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMD 186
+P++VT +S++ G+C+ K ++A L +M++ G +P+ +TF ++ L + K
Sbjct: 148 KLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKAS 207
Query: 187 EASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILI 246
EA L+D M+Q G +P+ TY +++G C G ++ A L ME+ + V YS +I
Sbjct: 208 EAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVI 267
Query: 247 NGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVA 306
+ CK + + AL+L++EM +KG++P+V+ +++L L + A +L +M +
Sbjct: 268 DSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKIN 327
Query: 307 ADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALEL 366
+ T+ ID K G +VEA +L+ + + DI Y+SLI+G C RL+ A +
Sbjct: 328 PNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHM 387
Query: 367 FRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIR 426
F + PNVVTY+ +I G C ++D+ +LF +M + +V N +T+ LI GF +
Sbjct: 388 FELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQ 447
Query: 427 INEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKN 462
+ + +M V P+ + ++D L KN
Sbjct: 448 ARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKN 483
Score = 182 bits (463), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 102/335 (30%), Positives = 174/335 (51%), Gaps = 6/335 (1%)
Query: 2 GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
G + F +L ++ + + V ++++I LC +A LFT++ G P+V TY
Sbjct: 239 GDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITY 298
Query: 62 TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
++L++ LC A L +M PN VT+ +ID KEG + +A++L
Sbjct: 299 SSLISCLCNYERWSDASRLLSDMIERK------INPNVVTFNALIDAFVKEGKLVEAEKL 352
Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
+M ++I P++ TY+S+I GFC +EAK +F M+ + PNVVT+N +++ CK
Sbjct: 353 YDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCK 412
Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
++DE L M Q G+ + TY TL+ GF ++A+ +F M S G + +
Sbjct: 413 AKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMT 472
Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
Y+ L++G CKN ++E A+ ++ + ++P + +N + G+ + +VE + LF +
Sbjct: 473 YNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLS 532
Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLR 336
GV D Y T I G C+ G EA LF +R
Sbjct: 533 LKGVKPDVIIYNTMISGFCRKGLKEEADALFRKMR 567
Score = 139 bits (351), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 75/233 (32%), Positives = 121/233 (51%), Gaps = 6/233 (2%)
Query: 2 GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
G++ + ++K PD T++SLI G C R+ EA +F + C P+V TY
Sbjct: 344 GKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTY 403
Query: 62 TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
TL+NG C+ + LF EM+ + G+V NTVTYTT+I G + D A+ +
Sbjct: 404 NTLINGFCKAKRIDEGVELFREMS----QRGLV--GNTVTYTTLIHGFFQARDCDNAQMV 457
Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
QM + PN++TY +++ G C +A +F + ++P + T+N++++ +CK
Sbjct: 458 FKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCK 517
Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMG 234
GK+++ L + GV+PD YNT++ GFC G A LF M G
Sbjct: 518 AGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKMREDG 570
Score = 105 bits (263), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 75/290 (25%), Positives = 126/290 (43%), Gaps = 39/290 (13%)
Query: 178 ELCKNG----KMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESM 233
E+ +NG K+D+A L M++ P F +N LL + + L M+ +
Sbjct: 55 EILRNGLHSMKLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRL 114
Query: 234 GCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERA 293
G H +++Y+ILIN +C+ +I AL+L +M+ G +P +V ++L G ++ A
Sbjct: 115 GISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDA 174
Query: 294 FKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDG 353
L D+M G DT T+ T I GL + EAV +L+D
Sbjct: 175 VALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAV-------------------ALVDR 215
Query: 354 LCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPN 413
+ + G PN+VTY +++ GLC G +D A +L ME + N
Sbjct: 216 MVQRG----------------CQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEAN 259
Query: 414 VITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNE 463
V+ + +I + + L +M+ V P+ S ++ L E
Sbjct: 260 VVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYE 309
Score = 82.8 bits (203), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 58/235 (24%), Positives = 111/235 (47%), Gaps = 1/235 (0%)
Query: 244 ILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRN 303
IL NG + +++ A+ L+ M+ P + N L + ++ + + L ++MQR
Sbjct: 56 ILRNGL-HSMKLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRL 114
Query: 304 GVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIA 363
G++ + +TY I+ C+ I A+ L + L E I +SL++G C R+ A
Sbjct: 115 GISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDA 174
Query: 364 LELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRG 423
+ L + P+ +T++ +I GL + +A L M + PN++T+ +++ G
Sbjct: 175 VALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNG 234
Query: 424 FIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEISLNSLPSFTVHEQQ 478
+ + LL+KM+ + + I S V+D L K ++L FT E +
Sbjct: 235 LCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENK 289
Score = 36.6 bits (83), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 29/59 (49%)
Query: 2 GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
G+V G+ + + PD + + ++I G C + EA ALF K+R G PD T
Sbjct: 519 GKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKMREDGPLPDSGT 577
>sp|Q9SH60|PP103_ARATH Pentatricopeptide repeat-containing protein At1g64100
OS=Arabidopsis thaliana GN=At1g64100 PE=2 SV=2
Length = 666
Score = 306 bits (785), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 169/477 (35%), Positives = 264/477 (55%), Gaps = 25/477 (5%)
Query: 3 RVSHGFVVLGRILKSCF---------------TPDAVTFTSLIKGLCAESRIMEAAALFT 47
R+S + G ++++ F TP +TF +LI GLC E R++EAAAL
Sbjct: 191 RISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVN 250
Query: 48 KLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIID 107
K+ G DV TY T+VNG+C+ T ALNL +M + +P+ V Y+ IID
Sbjct: 251 KMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETH------IKPDVVIYSAIID 304
Query: 108 GLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQP 167
LCK+G A+ L +M +K I PNV TY +I GFC W++A+RL +M+++ + P
Sbjct: 305 RLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINP 364
Query: 168 NVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELF 227
+V+TFN ++ K GK+ EA +L D M+ + PD TYN+++ GFC R + AK +F
Sbjct: 365 DVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMF 424
Query: 228 VSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEI 287
M S V +++ +I+ YC+ K ++ + L E+ +G+ + +NTL G E+
Sbjct: 425 DLMAS----PDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEV 480
Query: 288 HQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAY 347
+ A LF EM +GV DT T + G C+N + EA+ELF +++ K + D AY
Sbjct: 481 DNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAY 540
Query: 348 NSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEE 407
N +I G+CK +++ A +LF SLP + P+V TY++MI G C + A LF M++
Sbjct: 541 NIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKD 600
Query: 408 NAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEI 464
N P+ T++ LIRG ++ E K IEL+ +M+ DA + +V DL+ +
Sbjct: 601 NGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFTIKMVADLITDGRL 657
Score = 223 bits (569), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 128/419 (30%), Positives = 212/419 (50%), Gaps = 10/419 (2%)
Query: 2 GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
GRV ++ +++ D VT+ +++ G+C A L +K+ +PDV Y
Sbjct: 240 GRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIY 299
Query: 62 TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
+ +++ LC+ H A LF EM E G+ PN TY +IDG C G A+ L
Sbjct: 300 SAIIDRLCKDGHHSDAQYLFSEML----EKGIA--PNVFTYNCMIDGFCSFGRWSDAQRL 353
Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
L M ++ I P+V+T+ ++I EA++L EM+ + + P+ VT+N ++ CK
Sbjct: 354 LRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCK 413
Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
+ + D+A + DLM PD T+NT++D +C RV+ +L + G +
Sbjct: 414 HNRFDDAKHMFDLM----ASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTT 469
Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
Y+ LI+G+C+ + A L+ EM+S G+ PD + N L G E ++E A +LF+ +Q
Sbjct: 470 YNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQ 529
Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
+ + DT Y I G+CK + EA +LF +L I E D++ YN +I G C +
Sbjct: 530 MSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAIS 589
Query: 362 IALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDML 420
A LF + P+ TY+ +I G G++DK+ +L +M N + T M+
Sbjct: 590 DANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFTIKMV 648
Score = 207 bits (526), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 127/405 (31%), Positives = 210/405 (51%), Gaps = 14/405 (3%)
Query: 1 MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
MG +L ++ ++ PD V ++++I LC + +A LF+++ G P+VFT
Sbjct: 274 MGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFT 333
Query: 61 YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
Y +++G C A L +M P+ +T+ +I KEG + +A++
Sbjct: 334 YNCMIDGFCSFGRWSDAQRLLRDMIERE------INPDVLTFNALISASVKEGKLFEAEK 387
Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
L +M + I P+ VTY S+I GFC +++AK +F D P+VVTFN I+D C
Sbjct: 388 LCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMF----DLMASPDVVTFNTIIDVYC 443
Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
+ ++DE +LL + + G+ + TYNTL+ GFC +N A++LF M S G
Sbjct: 444 RAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTI 503
Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
+ +IL+ G+C+N+++E AL L+ + I D V +N + G+ + +V+ A+ LF +
Sbjct: 504 TCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSL 563
Query: 301 QRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRL 360
+GV D TY I G C I +A LFH ++ E D YN+LI G K+G +
Sbjct: 564 PIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEI 623
Query: 361 EIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDM 405
+ ++EL + + T M+ L DG++DK+ F DM
Sbjct: 624 DKSIELISEMRSNGFSGDAFTIK-MVADLITDGRLDKS---FSDM 664
Score = 194 bits (494), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 132/465 (28%), Positives = 222/465 (47%), Gaps = 33/465 (7%)
Query: 25 TFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEEM 84
+F LIK C ++ + + F KL G +PDV T+ TL++GLC AL LF M
Sbjct: 143 SFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYM 202
Query: 85 ANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGF 144
+ GF++ A L QM + + P V+T+ ++I G
Sbjct: 203 V-------------------------ETGFLE-AVALFDQMVEIGLTPVVITFNTLINGL 236
Query: 145 CYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDA 204
C EA L +M+ +G+ +VVT+ I++ +CK G A LL M + ++PD
Sbjct: 237 CLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDV 296
Query: 205 FTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSE 264
Y+ ++D C G + A+ LF M G VF+Y+ +I+G+C A L +
Sbjct: 297 VIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRD 356
Query: 265 MLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGY 324
M+ + I PDV+ N L + ++ A KL DEM + DT TY + I G CK+
Sbjct: 357 MIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNR 416
Query: 325 IVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSI 384
+A +F L D+ +N++ID C++ R++ ++L R + LV N TY+
Sbjct: 417 FDDAKHMFD----LMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNT 472
Query: 385 MIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEIN 444
+I G C ++ A+DLF +M + V P+ IT ++L+ GF + + +EL ++
Sbjct: 473 LIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSK 532
Query: 445 VMPDASIVSIVVDLLAKN---EISLNSLPSFTVHEQQEEVDESNV 486
+ D +I++ + K + + + S +H + +V NV
Sbjct: 533 IDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNV 577
Score = 160 bits (406), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 105/356 (29%), Positives = 174/356 (48%), Gaps = 19/356 (5%)
Query: 116 DKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVI 175
D A L +M+ + I N+ ++ +I+ FC + + F ++ G QP+VVTFN +
Sbjct: 123 DVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTL 182
Query: 176 MDELCKNGKMDEA---------------SRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRV 220
+ LC ++ EA L D M++ G+ P T+NTL++G CL GRV
Sbjct: 183 LHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRV 242
Query: 221 NHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTL 280
A L M G V +Y ++NG CK + + AL+L S+M IKPDVVI++ +
Sbjct: 243 LEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAI 302
Query: 281 FVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKC 340
L + A LF EM G+A + +TY IDG C G +A L + +
Sbjct: 303 IDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREI 362
Query: 341 EFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARD 400
D+ +N+LI K G+L A +L + + P+ VTY+ MI G C + D A+
Sbjct: 363 NPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKH 422
Query: 401 LFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVV 456
+F M P+V+TF+ +I + R + ++LL ++ ++ + + + ++
Sbjct: 423 MFDLMAS----PDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLI 474
Score = 129 bits (323), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 83/279 (29%), Positives = 131/279 (46%), Gaps = 15/279 (5%)
Query: 185 MDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSI 244
+D+A D M++ A N ++ F R + A L+ ME ++S++I
Sbjct: 87 LDDAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNI 146
Query: 245 LINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAF---------- 294
LI +C ++ +LS + ++ G +PDVV NTL GL ++ A
Sbjct: 147 LIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETG 206
Query: 295 -----KLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNS 349
LFD+M G+ T+ T I+GLC G ++EA L + + D+ Y +
Sbjct: 207 FLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGT 266
Query: 350 LIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENA 409
+++G+CK G + AL L + + P+VV YS +I LC DG A+ LF +M E
Sbjct: 267 IVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKG 326
Query: 410 VVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPD 448
+ PNV T++ +I GF S LL M E + PD
Sbjct: 327 IAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPD 365
>sp|Q9CAN6|PPR97_ARATH Pentatricopeptide repeat-containing protein At1g63070,
mitochondrial OS=Arabidopsis thaliana GN=At1g63070 PE=1
SV=1
Length = 590
Score = 300 bits (768), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 161/458 (35%), Positives = 262/458 (57%), Gaps = 7/458 (1%)
Query: 3 RVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYT 62
++S +LG+++K + P VT SL+ G C +RI EA AL ++ G +PD T+T
Sbjct: 125 QLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFT 184
Query: 63 TLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELL 122
TLV+GL + + A+ L E M C+P+ VTY +I+GLCK G D A LL
Sbjct: 185 TLVHGLFQHNKASEAVALVERMVVKG------CQPDLVTYGAVINGLCKRGEPDLALNLL 238
Query: 123 LQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKN 182
+M+ I+ +VV Y ++I G C K ++A LF +M +G++P+V T+N ++ LC
Sbjct: 239 NKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNY 298
Query: 183 GKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSM-ESMGCKHTVFS 241
G+ +ASRLL M++ + PD +N L+D F G++ A++L+ M +S C V +
Sbjct: 299 GRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVA 358
Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
Y+ LI G+CK K +E + ++ EM +G+ + V + TL G F+ + A +F +M
Sbjct: 359 YNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMV 418
Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
+GV D TY +DGLC NG + A+ +F ++ + DI Y ++I+ LCK+G++E
Sbjct: 419 SDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVE 478
Query: 362 IALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLI 421
+LF SL + PNVVTY+ M+ G C G ++A LF++M+E+ +PN T++ LI
Sbjct: 479 DGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLI 538
Query: 422 RGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLL 459
R +R + + EL+ +M+ DAS +V ++L
Sbjct: 539 RARLRDGDEAASAELIKEMRSCGFAGDASTFGLVTNML 576
Score = 195 bits (496), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 125/438 (28%), Positives = 222/438 (50%), Gaps = 13/438 (2%)
Query: 28 SLIKGLCAESRIMEAAALF---TKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEEM 84
+L + + + ++ +A LF K R F P + ++ L++ + + + + ++L E+M
Sbjct: 45 NLSRKVLQDLKLDDAIGLFGDMVKSRPF---PSIVEFSKLLSAIAKMNKFDLVISLGEQM 101
Query: 85 ANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGF 144
N G+ N TY+ I+ C+ + A +L +M P++VT S++ GF
Sbjct: 102 QN----LGI--SHNLYTYSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGF 155
Query: 145 CYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDA 204
C+ +EA L +M++ G QP+ VTF ++ L ++ K EA L++ M+ G +PD
Sbjct: 156 CHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDL 215
Query: 205 FTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSE 264
TY +++G C G + A L ME + V Y+ +I+G CK K ++ A L+++
Sbjct: 216 VTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNK 275
Query: 265 MLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGY 324
M +KGIKPDV +N L L + A +L +M + D + ID K G
Sbjct: 276 METKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGK 335
Query: 325 IVEAVELFHTL-RILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYS 383
+VEA +L+ + + C D+ AYN+LI G CK R+E +E+FR + LV N VTY+
Sbjct: 336 LVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYT 395
Query: 384 IMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEI 443
+I G D A+ +F M + V P+++T+++L+ G + + M++
Sbjct: 396 TLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKR 455
Query: 444 NVMPDASIVSIVVDLLAK 461
++ D + +++ L K
Sbjct: 456 DMKLDIVTYTTMIEALCK 473
Score = 184 bits (468), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 111/370 (30%), Positives = 188/370 (50%), Gaps = 7/370 (1%)
Query: 97 PNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRL 156
P+ V ++ ++ + K D L QM++ I N+ TY+ I FC + A +
Sbjct: 73 PSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIFINYFCRRSQLSLALAI 132
Query: 157 FIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCL 216
+MM G P++VT N +++ C ++ EA L+D M++ G +PD T+ TL+ G
Sbjct: 133 LGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQ 192
Query: 217 TGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVI 276
+ + A L M GC+ + +Y +ING CK E + AL+L ++M I+ DVVI
Sbjct: 193 HNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVI 252
Query: 277 HNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLR 336
+NT+ GL + ++ AF LF++M+ G+ D +TY I LC G +A L +
Sbjct: 253 YNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDML 312
Query: 337 ILKCEFDIRAYNSLIDGLCKSGRLEIALELF----RSLPCGVLVPNVVTYSIMIGGLCND 392
D+ +N+LID K G+L A +L+ +S C P+VV Y+ +I G C
Sbjct: 313 EKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHC---FPDVVAYNTLIKGFCKY 369
Query: 393 GQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIV 452
++++ ++F +M + +V N +T+ LI GF + + + +M V PD
Sbjct: 370 KRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTY 429
Query: 453 SIVVDLLAKN 462
+I++D L N
Sbjct: 430 NILLDGLCNN 439
Score = 66.6 bits (161), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 43/136 (31%), Positives = 68/136 (50%), Gaps = 6/136 (4%)
Query: 2 GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
G V VV + K D VT+T++I+ LC ++ + LF L + G +P+V TY
Sbjct: 440 GNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTY 499
Query: 62 TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
TT+++G CR A LF EM E G + PN+ TY T+I ++G + EL
Sbjct: 500 TTMMSGFCRKGLKEEADALFVEMK----EDGPL--PNSGTYNTLIRARLRDGDEAASAEL 553
Query: 122 LLQMKDKNIKPNVVTY 137
+ +M+ + T+
Sbjct: 554 IKEMRSCGFAGDASTF 569
>sp|Q3ECK2|PPR92_ARATH Pentatricopeptide repeat-containing protein At1g62680,
mitochondrial OS=Arabidopsis thaliana GN=At1g62680 PE=2
SV=2
Length = 548
Score = 288 bits (736), Expect = 8e-77, Method: Compositional matrix adjust.
Identities = 143/396 (36%), Positives = 233/396 (58%), Gaps = 6/396 (1%)
Query: 22 DAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLF 81
D TF +I C ++ A ++ K+ G EPD T +LVNG CR + A++L
Sbjct: 119 DLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLV 178
Query: 82 EEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVI 141
++M E G +P+ V Y IID LCK V+ A + +++ K I+PNVVTYT+++
Sbjct: 179 DKMV----EIGY--KPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALV 232
Query: 142 RGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVR 201
G C + W++A RL +M+ + + PNV+T++ ++D KNGK+ EA L + M++ +
Sbjct: 233 NGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSID 292
Query: 202 PDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSL 261
PD TY++L++G CL R++ A ++F M S GC V SY+ LING+CK K +E + L
Sbjct: 293 PDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKL 352
Query: 262 YSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCK 321
+ EM +G+ + V +NTL G F+ V++A + F +M G++ D WTY + GLC
Sbjct: 353 FREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCD 412
Query: 322 NGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVT 381
NG + +A+ +F ++ + + DI Y ++I G+CK+G++E A LF SL L P++VT
Sbjct: 413 NGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVT 472
Query: 382 YSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITF 417
Y+ M+ GLC G + + L+ M++ ++ N T
Sbjct: 473 YTTMMSGLCTKGLLHEVEALYTKMKQEGLMKNDCTL 508
Score = 243 bits (621), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 135/413 (32%), Positives = 221/413 (53%), Gaps = 14/413 (3%)
Query: 3 RVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYT 62
+VS +LG++LK + PD VT SL+ G C +R+ +A +L K+ G +PD+ Y
Sbjct: 135 QVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYN 194
Query: 63 TLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELL 122
+++ LC+T A + F+E+ G+ PN VTYT +++GLC A LL
Sbjct: 195 AIIDSLCKTKRVNDAFDFFKEIERK----GI--RPNVVTYTALVNGLCNSSRWSDAARLL 248
Query: 123 LQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKN 182
M K I PNV+TY++++ F EAK LF EM+ + P++VT++ +++ LC +
Sbjct: 249 SDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLH 308
Query: 183 GKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSY 242
++DEA+++ DLM+ G D +YNTL++GFC RV +LF M G +Y
Sbjct: 309 DRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTY 368
Query: 243 SILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQR 302
+ LI G+ + +++ A +S+M GI PD+ +N L GL + ++E+A +F++MQ+
Sbjct: 369 NTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQK 428
Query: 303 NGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEI 362
+ D TY T I G+CK G + EA LF +L + + DI Y +++ GLC G L
Sbjct: 429 REMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHE 488
Query: 363 ALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVI 415
L+ + L+ N T S DG + + +L M P+++
Sbjct: 489 VEALYTKMKQEGLMKNDCTLS--------DGDITLSAELIKKMLSCGYAPSLL 533
Score = 194 bits (492), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 110/366 (30%), Positives = 193/366 (52%), Gaps = 6/366 (1%)
Query: 77 ALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVT 136
A++LF +M P+ V + ++ + K D L +M+ I+ ++ T
Sbjct: 69 AIDLFSDMVKSRPF------PSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYT 122
Query: 137 YTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 196
+ VI FC + A + +M+ G +P+ VT +++ C+ ++ +A L+D M+
Sbjct: 123 FNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMV 182
Query: 197 QHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIE 256
+ G +PD YN ++D C T RVN A + F +E G + V +Y+ L+NG C +
Sbjct: 183 EIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWS 242
Query: 257 GALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFI 316
A L S+M+ K I P+V+ ++ L + +V A +LF+EM R + D TY + I
Sbjct: 243 DAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLI 302
Query: 317 DGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLV 376
+GLC + I EA ++F + C D+ +YN+LI+G CK+ R+E ++LFR + LV
Sbjct: 303 NGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLV 362
Query: 377 PNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIEL 436
N VTY+ +I G G +DKA++ F M+ + P++ T+++L+ G E K + +
Sbjct: 363 SNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVI 422
Query: 437 LHKMKE 442
M++
Sbjct: 423 FEDMQK 428
Score = 170 bits (431), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 97/348 (27%), Positives = 179/348 (51%)
Query: 132 PNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRL 191
P++V + ++ K ++ L +M G++ ++ TFN++++ C ++ A +
Sbjct: 83 PSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALSI 142
Query: 192 LDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCK 251
L M++ G PD T +L++GFC RV+ A L M +G K + +Y+ +I+ CK
Sbjct: 143 LGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCK 202
Query: 252 NKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWT 311
K + A + E+ KGI+P+VV + L GL + A +L +M + + + T
Sbjct: 203 TKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVIT 262
Query: 312 YRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLP 371
Y +D KNG ++EA ELF + + + DI Y+SLI+GLC R++ A ++F +
Sbjct: 263 YSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMV 322
Query: 372 CGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPS 431
+ +VV+Y+ +I G C +++ LF +M + +V N +T++ LI+GF + +
Sbjct: 323 SKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVD 382
Query: 432 KVIELLHKMKEINVMPDASIVSIVVDLLAKNEISLNSLPSFTVHEQQE 479
K E +M + PD +I++ L N +L F +++E
Sbjct: 383 KAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKRE 430
Score = 145 bits (367), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 87/274 (31%), Positives = 141/274 (51%), Gaps = 14/274 (5%)
Query: 2 GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
G+V + +++ PD VT++SLI GLC RI EA +F + GC DV +Y
Sbjct: 274 GKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSY 333
Query: 62 TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
TL+NG C+ + LF EM+ + G+V NTVTY T+I G + G VDKA+E
Sbjct: 334 NTLINGFCKAKRVEDGMKLFREMS----QRGLV--SNTVTYNTLIQGFFQAGDVDKAQEF 387
Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
QM I P++ TY ++ G C + +A +F +M + + ++VT+ ++ +CK
Sbjct: 388 FSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCK 447
Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
GK++EA L + G++PD TY T++ G C G ++ + L+ M+ G +
Sbjct: 448 TGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKNDCT 507
Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVV 275
S + +I + L +MLS G P ++
Sbjct: 508 LS--------DGDITLSAELIKKMLSCGYAPSLL 533
Score = 120 bits (302), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 71/257 (27%), Positives = 131/257 (50%), Gaps = 3/257 (1%)
Query: 184 KMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYS 243
K+++A L M++ P +N LL + + L ME +G ++ +++++
Sbjct: 65 KLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFN 124
Query: 244 ILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRN 303
I+IN +C ++ ALS+ +ML G +PD V +L G ++V A L D+M
Sbjct: 125 IVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEI 184
Query: 304 GVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIA 363
G D Y ID LCK + +A + F + ++ Y +L++GLC S R A
Sbjct: 185 GYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDA 244
Query: 364 LELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRG 423
L + + PNV+TYS ++ +G++ +A++LF +M ++ P+++T+ LI G
Sbjct: 245 ARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLING 304
Query: 424 FI---RINEPSKVIELL 437
RI+E +++ +L+
Sbjct: 305 LCLHDRIDEANQMFDLM 321
Score = 112 bits (281), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 67/239 (28%), Positives = 122/239 (51%)
Query: 219 RVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHN 278
++N A +LF M ++ ++ L++ K K+ + +SL +M GI+ D+ N
Sbjct: 65 KLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFN 124
Query: 279 TLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRIL 338
+ QV A + +M + G D T + ++G C+ + +AV L + +
Sbjct: 125 IVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEI 184
Query: 339 KCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKA 398
+ DI AYN++ID LCK+ R+ A + F+ + + PNVVTY+ ++ GLCN + A
Sbjct: 185 GYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDA 244
Query: 399 RDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVD 457
L DM + + PNVIT+ L+ F++ + + EL +M +++ PD S +++
Sbjct: 245 ARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLIN 303
Score = 36.2 bits (82), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 18/66 (27%), Positives = 38/66 (57%)
Query: 392 DGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASI 451
D +++ A DLF DM ++ P+++ F+ L+ +++ + VI L KM+ + + D
Sbjct: 63 DIKLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYT 122
Query: 452 VSIVVD 457
+IV++
Sbjct: 123 FNIVIN 128
>sp|Q9SI78|PPR93_ARATH Pentatricopeptide repeat-containing protein At1g62720
OS=Arabidopsis thaliana GN=At1g62720 PE=2 SV=1
Length = 485
Score = 282 bits (721), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 146/391 (37%), Positives = 229/391 (58%), Gaps = 9/391 (2%)
Query: 22 DAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLF 81
D ++ +I LC SR + A ++ K+ FG EPDV T ++L+NG C+ + A++L
Sbjct: 103 DLYSYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLV 162
Query: 82 EEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVI 141
+M E G P+ V Y TIIDG CK G V+ A EL +M+ ++ + VTY S++
Sbjct: 163 SKME----EMGF--RPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLV 216
Query: 142 RGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVR 201
G C + W++A RL +M+ + + PNV+TF ++D K GK EA +L + M + V
Sbjct: 217 AGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVD 276
Query: 202 PDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSL 261
PD FTYN+L++G C+ GRV+ AK++ M + GC V +Y+ LING+CK+K ++ L
Sbjct: 277 PDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKL 336
Query: 262 YSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCK 321
+ EM +G+ D + +NT+ G F+ + + A ++F M + TY + GLC
Sbjct: 337 FREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDSR---PNIRTYSILLYGLCM 393
Query: 322 NGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVT 381
N + +A+ LF ++ + E DI YN +I G+CK G +E A +LFRSL C L P+VV+
Sbjct: 394 NWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVS 453
Query: 382 YSIMIGGLCNDGQMDKARDLFLDMEENAVVP 412
Y+ MI G C Q DK+ L+ M+E+ ++P
Sbjct: 454 YTTMISGFCRKRQWDKSDLLYRKMQEDGLLP 484
Score = 234 bits (596), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 137/435 (31%), Positives = 237/435 (54%), Gaps = 9/435 (2%)
Query: 13 RILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTS 72
++++S P V F+ ++ + +LF + V G D+++Y ++N LCR S
Sbjct: 59 KMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCS 118
Query: 73 HTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKP 132
++AL++ +M +FG EP+ VT +++I+G C+ V A +L+ +M++ +P
Sbjct: 119 RFVIALSVVGKMM----KFGY--EPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRP 172
Query: 133 NVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLL 192
+VV Y ++I G C N+A LF M GV+ + VT+N ++ LC +G+ +A+RL+
Sbjct: 173 DVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLM 232
Query: 193 DLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKN 252
M+ + P+ T+ ++D F G+ + A +L+ M VF+Y+ LING C +
Sbjct: 233 RDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMH 292
Query: 253 KEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTY 312
++ A + M++KG PDVV +NTL G + +V+ KLF EM + G+ DT TY
Sbjct: 293 GRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITY 352
Query: 313 RTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPC 372
T I G + G A E+F + +IR Y+ L+ GLC + R+E AL LF ++
Sbjct: 353 NTIIQGYFQAGRPDAAQEIFSRM---DSRPNIRTYSILLYGLCMNWRVEKALVLFENMQK 409
Query: 373 GVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSK 432
+ ++ TY+I+I G+C G ++ A DLF + + P+V+++ +I GF R + K
Sbjct: 410 SEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDK 469
Query: 433 VIELLHKMKEINVMP 447
L KM+E ++P
Sbjct: 470 SDLLYRKMQEDGLLP 484
Score = 232 bits (591), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 126/368 (34%), Positives = 209/368 (56%), Gaps = 9/368 (2%)
Query: 10 VLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLC 69
V+G+++K + PD VT +SLI G C +R+ +A L +K+ G PDV Y T+++G C
Sbjct: 126 VVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSC 185
Query: 70 RTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKN 129
+ A+ LF+ M GV + VTY +++ GLC G A L+ M ++
Sbjct: 186 KIGLVNDAVELFDRMERD----GV--RADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRD 239
Query: 130 IKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEAS 189
I PNV+T+T+VI F ++EA +L+ EM + V P+V T+N +++ LC +G++DEA
Sbjct: 240 IVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAK 299
Query: 190 RLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGY 249
++LDLM+ G PD TYNTL++GFC + RV+ +LF M G +Y+ +I GY
Sbjct: 300 QMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGY 359
Query: 250 CKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADT 309
+ + A ++S M S +P++ ++ L GL +VE+A LF+ MQ++ + D
Sbjct: 360 FQAGRPDAAQEIFSRMDS---RPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDI 416
Query: 310 WTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRS 369
TY I G+CK G + +A +LF +L + D+ +Y ++I G C+ + + + L+R
Sbjct: 417 TTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRK 476
Query: 370 LPCGVLVP 377
+ L+P
Sbjct: 477 MQEDGLLP 484
Score = 188 bits (477), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 104/319 (32%), Positives = 170/319 (53%), Gaps = 9/319 (2%)
Query: 3 RVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYT 62
RV ++ ++ + F PD V + ++I G C + +A LF ++ G D TY
Sbjct: 154 RVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYN 213
Query: 63 TLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELL 122
+LV GLC + A L +M + PN +T+T +ID KEG +A +L
Sbjct: 214 SLVAGLCCSGRWSDAARLMRDMVMRD------IVPNVITFTAVIDVFVKEGKFSEAMKLY 267
Query: 123 LQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKN 182
+M + + P+V TY S+I G C +EAK++ M+ +G P+VVT+N +++ CK+
Sbjct: 268 EEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKS 327
Query: 183 GKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSY 242
++DE ++L M Q G+ D TYNT++ G+ GR + A+E+F M+S + + +Y
Sbjct: 328 KRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDS---RPNIRTY 384
Query: 243 SILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQR 302
SIL+ G C N +E AL L+ M I+ D+ +N + G+ +I VE A+ LF +
Sbjct: 385 SILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSC 444
Query: 303 NGVAADTWTYRTFIDGLCK 321
G+ D +Y T I G C+
Sbjct: 445 KGLKPDVVSYTTMISGFCR 463
Score = 177 bits (448), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 100/305 (32%), Positives = 165/305 (54%), Gaps = 9/305 (2%)
Query: 1 MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
+G V+ + R+ + DAVT+ SL+ GLC R +AA L + + P+V T
Sbjct: 187 IGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVIT 246
Query: 61 YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
+T +++ + A+ L+EEM +P+ TY ++I+GLC G VD+AK+
Sbjct: 247 FTAVIDVFVKEGKFSEAMKLYEEMTRR------CVDPDVFTYNSLINGLCMHGRVDEAKQ 300
Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
+L M K P+VVTY ++I GFC +K +E +LF EM +G+ + +T+N I+
Sbjct: 301 MLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYF 360
Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
+ G+ D A + M RP+ TY+ LL G C+ RV A LF +M+ + +
Sbjct: 361 QAGRPDAAQEIFSRM---DSRPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDIT 417
Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
+Y+I+I+G CK +E A L+ + KG+KPDVV + T+ G Q +++ L+ +M
Sbjct: 418 TYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKM 477
Query: 301 QRNGV 305
Q +G+
Sbjct: 478 QEDGL 482
Score = 176 bits (445), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 107/365 (29%), Positives = 185/365 (50%), Gaps = 3/365 (0%)
Query: 97 PNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRL 156
P+ V ++ ++ + K D L M+ I ++ +Y VI C + A +
Sbjct: 67 PSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSV 126
Query: 157 FIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCL 216
+MM G +P+VVT + +++ C+ ++ +A L+ M + G RPD YNT++DG C
Sbjct: 127 VGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCK 186
Query: 217 TGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVI 276
G VN A ELF ME G + +Y+ L+ G C + A L +M+ + I P+V+
Sbjct: 187 IGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVIT 246
Query: 277 HNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLR 336
+ + + A KL++EM R V D +TY + I+GLC +G + EA ++ +
Sbjct: 247 FTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMV 306
Query: 337 ILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMD 396
C D+ YN+LI+G CKS R++ +LFR + LV + +TY+ +I G G+ D
Sbjct: 307 TKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPD 366
Query: 397 KARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVV 456
A+++F M+ PN+ T+ +L+ G K + L M++ + D + +IV+
Sbjct: 367 AAQEIFSRMDSR---PNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVI 423
Query: 457 DLLAK 461
+ K
Sbjct: 424 HGMCK 428
Score = 164 bits (414), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 98/360 (27%), Positives = 184/360 (51%), Gaps = 3/360 (0%)
Query: 120 ELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDEL 179
+L +M P++V ++ V+ +K+++ LF M G+ ++ ++N++++ L
Sbjct: 55 DLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCL 114
Query: 180 CKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTV 239
C+ + A ++ M++ G PD T ++L++GFC RV A +L ME MG + V
Sbjct: 115 CRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDV 174
Query: 240 FSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDE 299
Y+ +I+G CK + A+ L+ M G++ D V +N+L GL + A +L +
Sbjct: 175 VIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRD 234
Query: 300 MQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGR 359
M + + T+ ID K G EA++L+ + + D+ YNSLI+GLC GR
Sbjct: 235 MVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGR 294
Query: 360 LEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDM 419
++ A ++ + +P+VVTY+ +I G C ++D+ LF +M + +V + IT++
Sbjct: 295 VDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNT 354
Query: 420 LIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEISLNSLPSFTVHEQQE 479
+I+G+ + P E+ +M + P+ SI++ L N +L F ++ E
Sbjct: 355 IIQGYFQAGRPDAAQEIFSRM---DSRPNIRTYSILLYGLCMNWRVEKALVLFENMQKSE 411
Score = 149 bits (377), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 81/271 (29%), Positives = 144/271 (53%), Gaps = 9/271 (3%)
Query: 2 GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
GR S ++ ++ P+ +TFT++I E + EA L+ ++ +PDVFTY
Sbjct: 223 GRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTY 282
Query: 62 TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
+L+NGLC A + + M C P+ VTY T+I+G CK VD+ +L
Sbjct: 283 NSLINGLCMHGRVDEAKQMLDLMVTKG------CLPDVVTYNTLINGFCKSKRVDEGTKL 336
Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
+M + + + +TY ++I+G+ A + A+ +F M +PN+ T+++++ LC
Sbjct: 337 FREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRM---DSRPNIRTYSILLYGLCM 393
Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
N ++++A L + M + + D TYN ++ G C G V A +LF S+ G K V S
Sbjct: 394 NWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVS 453
Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKP 272
Y+ +I+G+C+ ++ + + LY +M G+ P
Sbjct: 454 YTTMISGFCRKRQWDKSDLLYRKMQEDGLLP 484
Score = 132 bits (333), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 87/282 (30%), Positives = 141/282 (50%), Gaps = 6/282 (2%)
Query: 185 MDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSI 244
++E L MIQ P ++ +L + + LF ME G H ++SY+I
Sbjct: 50 LEEEIDLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNI 109
Query: 245 LINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNG 304
+IN C+ ALS+ +M+ G +PDVV ++L G + ++V A L +M+ G
Sbjct: 110 VINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMG 169
Query: 305 VAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIAL 364
D Y T IDG CK G + +AVELF + D YNSL+ GLC SGR A
Sbjct: 170 FRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAA 229
Query: 365 ELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGF 424
L R + +VPNV+T++ +I +G+ +A L+ +M V P+V T++ LI G
Sbjct: 230 RLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGL 289
Query: 425 I---RINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNE 463
R++E ++++L M +PD + +++ K++
Sbjct: 290 CMHGRVDEAKQMLDL---MVTKGCLPDVVTYNTLINGFCKSK 328
>sp|Q76C99|RF1_ORYSI Protein Rf1, mitochondrial OS=Oryza sativa subsp. indica GN=Rf1
PE=2 SV=1
Length = 791
Score = 277 bits (709), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 154/470 (32%), Positives = 249/470 (52%), Gaps = 31/470 (6%)
Query: 21 PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
PD VT++ L+ LC R MEA +F + G +P++ TY TL+ G T +V ++
Sbjct: 299 PDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYA-TKGALVEMHG 357
Query: 81 FEEMANGNG------EFGV-VC-----------------------EPNTVTYTTIIDGLC 110
++ NG F + +C PN VTY +I LC
Sbjct: 358 LLDLMVRNGIHPDHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILC 417
Query: 111 KEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVV 170
K G V+ A QM D+ + P + Y S+I G C W A+ L +EM+D+G+ N +
Sbjct: 418 KSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTI 477
Query: 171 TFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSM 230
FN I+D CK G++ E+ +L +LM++ GV+P+ TYNTL++G+CL G+++ A +L M
Sbjct: 478 FFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGM 537
Query: 231 ESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQV 290
S+G K +YS LINGYCK +E AL L+ EM S G+ PD++ +N + GLF+ +
Sbjct: 538 VSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRT 597
Query: 291 ERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSL 350
A +L+ + +G + TY + GLCKN +A+++F L ++ + + R +N +
Sbjct: 598 AAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIM 657
Query: 351 IDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAV 410
ID L K GR + A +LF + LVPN TY +M + G +++ LFL ME+N
Sbjct: 658 IDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGC 717
Query: 411 VPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLA 460
+ + ++R ++ E ++ L + E + +AS S+ +DLL+
Sbjct: 718 TVDSGMLNFIVRELLQRGEITRAGTYLSMIDEKHFSLEASTASLFIDLLS 767
Score = 273 bits (697), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 165/542 (30%), Positives = 273/542 (50%), Gaps = 74/542 (13%)
Query: 2 GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAAL-FTKLRVFGCEPDVFT 60
GR+ GF LG ++K F DA+ FT L+KGLCA+ R +A + ++ GC P+VF+
Sbjct: 101 GRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTELGCIPNVFS 160
Query: 61 YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
Y L+ GLC + + AL L MA+ G P+ V+YTT+I+G KEG DKA
Sbjct: 161 YNILLKGLCDENRSQEALELLHMMADDRGGGS---PPDVVSYTTVINGFFKEGDSDKAYS 217
Query: 121 LLLQMKDKNIKPNVVTYTSVI-----------------------------------RGFC 145
+M D+ I P+VVTY S+I G+C
Sbjct: 218 TYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYC 277
Query: 146 YAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAF 205
+ EA +M GV+P+VVT++++MD LCKNG+ EA ++ D M + G++P+
Sbjct: 278 SSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEIT 337
Query: 206 TYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEM 265
TY TLL G+ G + L M G + +SILI Y K +++ A+ ++S+M
Sbjct: 338 TYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYAKQGKVDQAMLVFSKM 397
Query: 266 LSKGIKPDVV-----------------------------------IHNTLFVGLFEIHQV 290
+G+ P+ V ++N+L GL ++
Sbjct: 398 RQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKW 457
Query: 291 ERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSL 350
ERA +L EM G+ +T + + ID CK G ++E+ +LF + + + ++ YN+L
Sbjct: 458 ERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTL 517
Query: 351 IDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAV 410
I+G C +G+++ A++L + L PN VTYS +I G C +M+ A LF +ME + V
Sbjct: 518 INGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGV 577
Query: 411 VPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEISLNSLP 470
P++IT++++++G + + EL ++ E + S +I++ L KN+++ ++L
Sbjct: 578 SPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQ 637
Query: 471 SF 472
F
Sbjct: 638 MF 639
Score = 141 bits (355), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 84/303 (27%), Positives = 147/303 (48%), Gaps = 6/303 (1%)
Query: 22 DAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLF 81
+ + F S+I C E R++E+ LF + G +P+V TY TL+NG C A+ L
Sbjct: 475 NTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLL 534
Query: 82 EEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVI 141
M + V +PNTVTY+T+I+G CK ++ A L +M+ + P+++TY ++
Sbjct: 535 SGMVS------VGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIIL 588
Query: 142 RGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVR 201
+G + AK L++ + + G Q + T+N+I+ LCKN D+A ++ + ++
Sbjct: 589 QGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLK 648
Query: 202 PDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSL 261
+A T+N ++D GR + AK+LFV+ S G ++Y ++ +E L
Sbjct: 649 LEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQL 708
Query: 262 YSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCK 321
+ M G D + N + L + ++ RA + + + T FID L
Sbjct: 709 FLSMEDNGCTVDSGMLNFIVRELLQRGEITRAGTYLSMIDEKHFSLEASTASLFIDLLSG 768
Query: 322 NGY 324
Y
Sbjct: 769 GKY 771
Score = 129 bits (323), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 95/369 (25%), Positives = 165/369 (44%), Gaps = 43/369 (11%)
Query: 152 EAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHG---VRPDAFTYN 208
+A+ +F E++ +G ++ N + ++ ++ SR + M + G V PD TY
Sbjct: 33 DARHVFDELLRRGRGASIYGLNRALADVARDSPAAAVSRY-NRMARAGADEVTPDLCTYG 91
Query: 209 -----------------------------------TLLDGFCLTGRVNHAKELFV-SMES 232
LL G C R + A ++ + M
Sbjct: 92 ILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTE 151
Query: 233 MGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSK---GIKPDVVIHNTLFVGLFEIHQ 289
+GC VFSY+IL+ G C + AL L M G PDVV + T+ G F+
Sbjct: 152 LGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEGD 211
Query: 290 VERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNS 349
++A+ + EM G+ D TY + I LCK + +A+E+ +T+ D YNS
Sbjct: 212 SDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNS 271
Query: 350 LIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENA 409
++ G C SG+ + A+ + + + P+VVTYS+++ LC +G+ +AR +F M +
Sbjct: 272 ILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRG 331
Query: 410 VVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEISLNSL 469
+ P + T+ L++G+ ++ LL M + PD + SI++ AK ++
Sbjct: 332 LKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYAKQGKVDQAM 391
Query: 470 PSFTVHEQQ 478
F+ QQ
Sbjct: 392 LVFSKMRQQ 400
Score = 75.5 bits (184), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 96/212 (45%), Gaps = 6/212 (2%)
Query: 1 MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
+ R+ V+ + S +PD +T+ +++GL R A L+ ++ G + ++ T
Sbjct: 559 ISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELST 618
Query: 61 YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
Y +++GLC+ T AL +F+ + + + T+ +ID L K G D+AK+
Sbjct: 619 YNIILHGLCKNKLTDDALQMFQNLCLMDLKL------EARTFNIMIDALLKVGRNDEAKD 672
Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
L + + PN TY + E +LF+ M D G + N I+ EL
Sbjct: 673 LFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELL 732
Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLD 212
+ G++ A L ++ + +A T + +D
Sbjct: 733 QRGEITRAGTYLSMIDEKHFSLEASTASLFID 764
>sp|Q9LUR2|PP238_ARATH Putative pentatricopeptide repeat-containing protein At3g16710,
mitochondrial OS=Arabidopsis thaliana GN=At3g16710 PE=3
SV=1
Length = 507
Score = 272 bits (695), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 139/393 (35%), Positives = 224/393 (56%), Gaps = 6/393 (1%)
Query: 21 PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
P T ++ +C S+ A+ K+ G EPD+ T+T+L+NG C + A+ L
Sbjct: 116 PLLCTCNIVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIAL 175
Query: 81 FEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSV 140
F+++ G+ +PN VTYTT+I LCK ++ A EL QM +PNVVTY ++
Sbjct: 176 FDQI------LGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNAL 229
Query: 141 IRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGV 200
+ G C W +A L +MM + ++PNV+TF ++D K GK+ EA L ++MIQ V
Sbjct: 230 VTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSV 289
Query: 201 RPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALS 260
PD FTY +L++G C+ G ++ A+++F ME GC Y+ LI+G+CK+K +E +
Sbjct: 290 YPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMK 349
Query: 261 LYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLC 320
++ EM KG+ + + + L G + + + A ++F++M D TY +DGLC
Sbjct: 350 IFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLC 409
Query: 321 KNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVV 380
NG + +A+ +F +R + + +I Y +I G+CK G++E A +LF SL + PNV+
Sbjct: 410 CNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVI 469
Query: 381 TYSIMIGGLCNDGQMDKARDLFLDMEENAVVPN 413
TY+ MI G C G + +A LF M+E+ +PN
Sbjct: 470 TYTTMISGFCRRGLIHEADSLFKKMKEDGFLPN 502
Score = 251 bits (640), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 149/439 (33%), Positives = 236/439 (53%), Gaps = 6/439 (1%)
Query: 13 RILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTS 72
R++ S P + FT L+ + +R +LF ++++ G P + T +++ +C +S
Sbjct: 73 RMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCTCNIVMHCVCLSS 132
Query: 73 HTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKP 132
A +M + G EP+ VT+T++++G C ++ A L Q+ KP
Sbjct: 133 QPCRASCFLGKMM----KLGF--EPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKP 186
Query: 133 NVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLL 192
NVVTYT++IR C + N A LF +M G +PNVVT+N ++ LC+ G+ +A+ LL
Sbjct: 187 NVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLL 246
Query: 193 DLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKN 252
M++ + P+ T+ L+D F G++ AKEL+ M M VF+Y LING C
Sbjct: 247 RDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMY 306
Query: 253 KEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTY 312
++ A ++ M G P+ VI+ TL G + +VE K+F EM + GV A+T TY
Sbjct: 307 GLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITY 366
Query: 313 RTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPC 372
I G C G A E+F+ + + DIR YN L+DGLC +G++E AL +F +
Sbjct: 367 TVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRK 426
Query: 373 GVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSK 432
+ N+VTY+I+I G+C G+++ A DLF + + PNVIT+ +I GF R +
Sbjct: 427 REMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHE 486
Query: 433 VIELLHKMKEINVMPDASI 451
L KMKE +P+ S+
Sbjct: 487 ADSLFKKMKEDGFLPNESV 505
Score = 232 bits (591), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 130/372 (34%), Positives = 204/372 (54%), Gaps = 6/372 (1%)
Query: 11 LGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCR 70
LG+++K F PD VTFTSL+ G C +RI +A ALF ++ G +P+V TYTTL+ LC+
Sbjct: 141 LGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCK 200
Query: 71 TSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNI 130
H A+ LF +M NG PN VTY ++ GLC+ G A LL M + I
Sbjct: 201 NRHLNHAVELFNQMGT-NGS-----RPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRI 254
Query: 131 KPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASR 190
+PNV+T+T++I F EAK L+ M+ V P+V T+ +++ LC G +DEA +
Sbjct: 255 EPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQ 314
Query: 191 LLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYC 250
+ LM ++G P+ Y TL+ GFC + RV ++F M G +Y++LI GYC
Sbjct: 315 MFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYC 374
Query: 251 KNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTW 310
+ A ++++M S+ PD+ +N L GL +VE+A +F+ M++ + +
Sbjct: 375 LVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIV 434
Query: 311 TYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSL 370
TY I G+CK G + +A +LF +L + ++ Y ++I G C+ G + A LF+ +
Sbjct: 435 TYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKKM 494
Query: 371 PCGVLVPNVVTY 382
+PN Y
Sbjct: 495 KEDGFLPNESVY 506
Score = 194 bits (493), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 107/334 (32%), Positives = 174/334 (52%), Gaps = 6/334 (1%)
Query: 3 RVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYT 62
R+ + +IL F P+ VT+T+LI+ LC + A LF ++ G P+V TY
Sbjct: 168 RIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYN 227
Query: 63 TLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELL 122
LV GLC A L +M EPN +T+T +ID K G + +AKEL
Sbjct: 228 ALVTGLCEIGRWGDAAWLLRDMMKRR------IEPNVITFTALIDAFVKVGKLMEAKELY 281
Query: 123 LQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKN 182
M ++ P+V TY S+I G C +EA+++F M G PN V + ++ CK+
Sbjct: 282 NVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKS 341
Query: 183 GKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSY 242
++++ ++ M Q GV + TY L+ G+CL GR + A+E+F M S + +Y
Sbjct: 342 KRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTY 401
Query: 243 SILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQR 302
++L++G C N ++E AL ++ M + + ++V + + G+ ++ +VE AF LF +
Sbjct: 402 NVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFS 461
Query: 303 NGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLR 336
G+ + TY T I G C+ G I EA LF ++
Sbjct: 462 KGMKPNVITYTTMISGFCRRGLIHEADSLFKKMK 495
Score = 182 bits (462), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 111/380 (29%), Positives = 193/380 (50%), Gaps = 2/380 (0%)
Query: 101 TYTTII-DGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIE 159
+Y I+ +GL F D A +L +M P+++ +T ++ ++ LF +
Sbjct: 50 SYRKILRNGLHNLQFND-ALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQ 108
Query: 160 MMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGR 219
M G+ P + T N++M +C + + AS L M++ G PD T+ +LL+G+C R
Sbjct: 109 MQILGIPPLLCTCNIVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNR 168
Query: 220 VNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNT 279
+ A LF + MG K V +Y+ LI CKN+ + A+ L+++M + G +P+VV +N
Sbjct: 169 IEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNA 228
Query: 280 LFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILK 339
L GL EI + A L +M + + + T+ ID K G ++EA EL++ + +
Sbjct: 229 LVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMS 288
Query: 340 CEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKAR 399
D+ Y SLI+GLC G L+ A ++F + PN V Y+ +I G C +++
Sbjct: 289 VYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGM 348
Query: 400 DLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLL 459
+F +M + VV N IT+ +LI+G+ + P E+ ++M PD ++++D L
Sbjct: 349 KIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGL 408
Query: 460 AKNEISLNSLPSFTVHEQQE 479
N +L F ++E
Sbjct: 409 CCNGKVEKALMIFEYMRKRE 428
Score = 169 bits (429), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 102/385 (26%), Positives = 192/385 (49%), Gaps = 6/385 (1%)
Query: 77 ALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVT 136
AL+LF M + P+ + +T ++ + K D L QM+ I P + T
Sbjct: 67 ALDLFTRMVHSRPL------PSIIDFTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCT 120
Query: 137 YTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 196
V+ C + A +MM G +P++VTF +++ C ++++A L D ++
Sbjct: 121 CNIVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQIL 180
Query: 197 QHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIE 256
G +P+ TY TL+ C +NHA ELF M + G + V +Y+ L+ G C+
Sbjct: 181 GMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWG 240
Query: 257 GALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFI 316
A L +M+ + I+P+V+ L ++ ++ A +L++ M + V D +TY + I
Sbjct: 241 DAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLI 300
Query: 317 DGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLV 376
+GLC G + EA ++F+ + C + Y +LI G CKS R+E +++F + +V
Sbjct: 301 NGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVV 360
Query: 377 PNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIEL 436
N +TY+++I G C G+ D A+++F M P++ T+++L+ G + K + +
Sbjct: 361 ANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMI 420
Query: 437 LHKMKEINVMPDASIVSIVVDLLAK 461
M++ + + +I++ + K
Sbjct: 421 FEYMRKREMDINIVTYTIIIQGMCK 445
Score = 165 bits (418), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 91/277 (32%), Positives = 149/277 (53%), Gaps = 6/277 (2%)
Query: 1 MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
+GR +L ++K P+ +TFT+LI ++MEA L+ + PDVFT
Sbjct: 236 IGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFT 295
Query: 61 YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
Y +L+NGLC A +F M NG C PN V YTT+I G CK V+ +
Sbjct: 296 YGSLINGLCMYGLLDEARQMFYLMER-NG-----CYPNEVIYTTLIHGFCKSKRVEDGMK 349
Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
+ +M K + N +TYT +I+G+C + A+ +F +M + P++ T+NV++D LC
Sbjct: 350 IFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLC 409
Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
NGK+++A + + M + + + TY ++ G C G+V A +LF S+ S G K V
Sbjct: 410 CNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVI 469
Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIH 277
+Y+ +I+G+C+ I A SL+ +M G P+ ++
Sbjct: 470 TYTTMISGFCRRGLIHEADSLFKKMKEDGFLPNESVY 506
>sp|Q9LQ15|PPR95_ARATH Pentatricopeptide repeat-containing protein At1g62914,
mitochondrial OS=Arabidopsis thaliana GN=At1g62914 PE=2
SV=1
Length = 528
Score = 271 bits (692), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 132/361 (36%), Positives = 216/361 (59%), Gaps = 6/361 (1%)
Query: 3 RVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYT 62
R+S ++ ++++ + PD VTFT+LI GL ++ EA AL ++ GC+PD+ TY
Sbjct: 163 RISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYG 222
Query: 63 TLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELL 122
+VNGLC+ T +ALNL +M E N V Y+T+ID LCK D A L
Sbjct: 223 AVVNGLCKRGDTDLALNLLNKMEAAK------IEANVVIYSTVIDSLCKYRHEDDALNLF 276
Query: 123 LQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKN 182
+M++K ++PNV+TY+S+I C W++A RL +M+++ + PN+VTF+ ++D K
Sbjct: 277 TEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKK 336
Query: 183 GKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSY 242
GK+ +A +L + MI+ + P+ FTY++L++GFC+ R+ AK++ M C V +Y
Sbjct: 337 GKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTY 396
Query: 243 SILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQR 302
+ LING+CK K ++ + L+ EM +G+ + V + TL G F+ + A +F +M
Sbjct: 397 NTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVS 456
Query: 303 NGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEI 362
GV + TY +DGLCKNG + +A+ +F L+ E DI YN +I+G+CK+G+ ++
Sbjct: 457 VGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKWKM 516
Query: 363 A 363
Sbjct: 517 G 517
Score = 204 bits (520), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 126/452 (27%), Positives = 231/452 (51%), Gaps = 6/452 (1%)
Query: 10 VLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLC 69
+ G + +S P + F+ L+ + ++ + K+ + G +++TY L+N C
Sbjct: 65 LFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYNILINCFC 124
Query: 70 RTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKN 129
R S +AL L +M + G EP+ VT ++++G C + A L+ QM +
Sbjct: 125 RCSRLSLALALLGKMM----KLGY--EPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMG 178
Query: 130 IKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEAS 189
KP+ VT+T++I G +EA L M+ +G QP++VT+ +++ LCK G D A
Sbjct: 179 YKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLAL 238
Query: 190 RLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGY 249
LL+ M + + Y+T++D C + A LF ME+ G + V +YS LI+
Sbjct: 239 NLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCL 298
Query: 250 CKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADT 309
C A L S+M+ + I P++V + L + ++ +A KL++EM + + +
Sbjct: 299 CNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNI 358
Query: 310 WTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRS 369
+TY + I+G C + EA ++ + C ++ YN+LI+G CK+ R++ +ELFR
Sbjct: 359 FTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFRE 418
Query: 370 LPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINE 429
+ LV N VTY+ +I G D A+ +F M V PN++T+++L+ G + +
Sbjct: 419 MSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGK 478
Query: 430 PSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
+K + + ++ + PD +I+++ + K
Sbjct: 479 LAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCK 510
Score = 192 bits (488), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 116/407 (28%), Positives = 212/407 (52%), Gaps = 6/407 (1%)
Query: 56 PDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFV 115
P + ++ L++ + + + + ++ E+M G+ N TY +I+ C+ +
Sbjct: 76 PSIIEFSKLLSAIAKMNKFDLVISFGEKME----ILGI--SHNLYTYNILINCFCRCSRL 129
Query: 116 DKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVI 175
A LL +M +P++VT S++ GFC+ ++A L +M++ G +P+ VTF +
Sbjct: 130 SLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTL 189
Query: 176 MDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGC 235
+ L + K EA L+D M+Q G +PD TY +++G C G + A L ME+
Sbjct: 190 IHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKI 249
Query: 236 KHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFK 295
+ V YS +I+ CK + + AL+L++EM +KG++P+V+ +++L L + A +
Sbjct: 250 EANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASR 309
Query: 296 LFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLC 355
L +M + + T+ ID K G +V+A +L+ + + +I Y+SLI+G C
Sbjct: 310 LLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFC 369
Query: 356 KSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVI 415
RL A ++ + +PNVVTY+ +I G C ++DK +LF +M + +V N +
Sbjct: 370 MLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTV 429
Query: 416 TFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKN 462
T+ LI GF + + + +M + V P+ +I++D L KN
Sbjct: 430 TYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKN 476
Score = 158 bits (400), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 77/228 (33%), Positives = 132/228 (57%), Gaps = 6/228 (2%)
Query: 2 GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
GR S +L +++ P+ VTF++LI + ++++A L+ ++ +P++FTY
Sbjct: 302 GRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTY 361
Query: 62 TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
++L+NG C A + E M + C PN VTY T+I+G CK VDK EL
Sbjct: 362 SSLINGFCMLDRLGEAKQMLELMIRKD------CLPNVVTYNTLINGFCKAKRVDKGMEL 415
Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
+M + + N VTYT++I GF A+D + A+ +F +M+ GV PN++T+N+++D LCK
Sbjct: 416 FREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCK 475
Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVS 229
NGK+ +A + + + + + PD +TYN +++G C G+ FV+
Sbjct: 476 NGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKWKMGGIYFVA 523
Score = 151 bits (382), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 98/321 (30%), Positives = 162/321 (50%)
Query: 137 YTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 196
Y V+R + ++A LF M P+++ F+ ++ + K K D + M
Sbjct: 46 YREVLRTGLSDIELDDAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKME 105
Query: 197 QHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIE 256
G+ + +TYN L++ FC R++ A L M +G + + + + L+NG+C I
Sbjct: 106 ILGISHNLYTYNILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRIS 165
Query: 257 GALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFI 316
A++L +M+ G KPD V TL GLF ++ A L D M + G D TY +
Sbjct: 166 DAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVV 225
Query: 317 DGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLV 376
+GLCK G A+ L + + K E ++ Y+++ID LCK + AL LF + +
Sbjct: 226 NGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVR 285
Query: 377 PNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIEL 436
PNV+TYS +I LCN G+ A L DM E + PN++TF LI F++ + K +L
Sbjct: 286 PNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKL 345
Query: 437 LHKMKEINVMPDASIVSIVVD 457
+M + ++ P+ S +++
Sbjct: 346 YEEMIKRSIDPNIFTYSSLIN 366
Score = 136 bits (342), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 87/278 (31%), Positives = 134/278 (48%)
Query: 184 KMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYS 243
++D+A L +M Q P ++ LL + + ME +G H +++Y+
Sbjct: 58 ELDDAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYN 117
Query: 244 ILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRN 303
ILIN +C+ + AL+L +M+ G +PD+V N+L G +++ A L D+M
Sbjct: 118 ILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEM 177
Query: 304 GVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIA 363
G DT T+ T I GL + EAV L + C+ D+ Y ++++GLCK G ++A
Sbjct: 178 GYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLA 237
Query: 364 LELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRG 423
L L + + NVV YS +I LC D A +LF +ME V PNVIT+ LI
Sbjct: 238 LNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISC 297
Query: 424 FIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
S LL M E + P+ S ++D K
Sbjct: 298 LCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVK 335
Score = 73.6 bits (179), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/241 (22%), Positives = 112/241 (46%)
Query: 238 TVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLF 297
T + Y ++ + E++ A+ L+ M P ++ + L + ++++ +
Sbjct: 42 TSYDYREVLRTGLSDIELDDAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFG 101
Query: 298 DEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKS 357
++M+ G++ + +TY I+ C+ + A+ L + L E DI NSL++G C
Sbjct: 102 EKMEILGISHNLYTYNILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHG 161
Query: 358 GRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITF 417
R+ A+ L + P+ VT++ +I GL + +A L M + P+++T+
Sbjct: 162 NRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTY 221
Query: 418 DMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEISLNSLPSFTVHEQ 477
++ G + + + LL+KM+ + + I S V+D L K ++L FT E
Sbjct: 222 GAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMEN 281
Query: 478 Q 478
+
Sbjct: 282 K 282
>sp|Q9FLL3|PP412_ARATH Pentatricopeptide repeat-containing protein At5g41170,
mitochondrial OS=Arabidopsis thaliana GN=At5g41170 PE=2
SV=1
Length = 527
Score = 268 bits (686), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 143/403 (35%), Positives = 237/403 (58%), Gaps = 9/403 (2%)
Query: 11 LGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCR 70
LG+++K F PD VTFTSLI G C +R+ EA ++ ++ G +PDV YTT+++ LC+
Sbjct: 130 LGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCK 189
Query: 71 TSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNI 130
H AL+LF++M N +G+ P+ V YT++++GLC G A LL M + I
Sbjct: 190 NGHVNYALSLFDQMEN----YGI--RPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKI 243
Query: 131 KPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASR 190
KP+V+T+ ++I F + +A+ L+ EM+ + PN+ T+ +++ C G +DEA +
Sbjct: 244 KPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQ 303
Query: 191 LLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYC 250
+ LM G PD Y +L++GFC +V+ A ++F M G +Y+ LI G+
Sbjct: 304 MFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFG 363
Query: 251 KNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQR---NGVAA 307
+ + A ++S M+S+G+ P++ +N L L +V++A +F++MQ+ +GVA
Sbjct: 364 QVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAP 423
Query: 308 DTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELF 367
+ WTY + GLC NG + +A+ +F +R + + I Y +I G+CK+G+++ A+ LF
Sbjct: 424 NIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLF 483
Query: 368 RSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAV 410
SLP + PNVVTY+ MI GL +G +A LF M+E+ V
Sbjct: 484 CSLPSKGVKPNVVTYTTMISGLFREGLKHEAHVLFRKMKEDGV 526
Score = 264 bits (674), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 150/429 (34%), Positives = 242/429 (56%), Gaps = 13/429 (3%)
Query: 22 DAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLF 81
D T L+ C S+ A++ K+ G EPD+ T+T+L+NG C + A+++
Sbjct: 106 DLYTCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMV 165
Query: 82 EEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVI 141
+M E G+ +P+ V YTTIID LCK G V+ A L QM++ I+P+VV YTS++
Sbjct: 166 NQMV----EMGI--KPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLV 219
Query: 142 RGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVR 201
G C + W +A L M + ++P+V+TFN ++D K GK +A L + MI+ +
Sbjct: 220 NGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIA 279
Query: 202 PDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSL 261
P+ FTY +L++GFC+ G V+ A+++F ME+ GC V +Y+ LING+CK K+++ A+ +
Sbjct: 280 PNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKI 339
Query: 262 YSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCK 321
+ EM KG+ + + + TL G ++ + A ++F M GV + TY + LC
Sbjct: 340 FYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCY 399
Query: 322 NGYIVEAVELFHTLRILKCEFD-----IRAYNSLIDGLCKSGRLEIALELFRSLPCGVLV 376
NG + +A+ +F ++ K E D I YN L+ GLC +G+LE AL +F + +
Sbjct: 400 NGKVKKALMIFEDMQ--KREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMD 457
Query: 377 PNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIEL 436
++TY+I+I G+C G++ A +LF + V PNV+T+ +I G R + L
Sbjct: 458 IGIITYTIIIQGMCKAGKVKNAVNLFCSLPSKGVKPNVVTYTTMISGLFREGLKHEAHVL 517
Query: 437 LHKMKEINV 445
KMKE V
Sbjct: 518 FRKMKEDGV 526
Score = 199 bits (505), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 116/371 (31%), Positives = 200/371 (53%), Gaps = 9/371 (2%)
Query: 3 RVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYT 62
R+ ++ ++++ PD V +T++I LC + A +LF ++ +G PDV YT
Sbjct: 157 RMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYT 216
Query: 63 TLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELL 122
+LVNGLC + A +L M +P+ +T+ +ID KEG A+EL
Sbjct: 217 SLVNGLCNSGRWRDADSLLRGMTKRK------IKPDVITFNALIDAFVKEGKFLDAEELY 270
Query: 123 LQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKN 182
+M +I PN+ TYTS+I GFC +EA+++F M +G P+VV + +++ CK
Sbjct: 271 NEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKC 330
Query: 183 GKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSY 242
K+D+A ++ M Q G+ + TY TL+ GF G+ N A+E+F M S G + +Y
Sbjct: 331 KKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTY 390
Query: 243 SILINGYCKNKEIEGALSLYSEMLSK---GIKPDVVIHNTLFVGLFEIHQVERAFKLFDE 299
++L++ C N +++ AL ++ +M + G+ P++ +N L GL ++E+A +F++
Sbjct: 391 NVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFED 450
Query: 300 MQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGR 359
M++ + TY I G+CK G + AV LF +L + ++ Y ++I GL + G
Sbjct: 451 MRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSKGVKPNVVTYTTMISGLFREGL 510
Query: 360 LEIALELFRSL 370
A LFR +
Sbjct: 511 KHEAHVLFRKM 521
Score = 182 bits (463), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 107/389 (27%), Positives = 197/389 (50%), Gaps = 9/389 (2%)
Query: 77 ALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVT 136
AL+LF M P+ + +T +++ + K D L ++ + ++ T
Sbjct: 56 ALDLFTHMVESRPL------PSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYT 109
Query: 137 YTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 196
++ FC + A +MM G +P++VTF +++ C +M+EA +++ M+
Sbjct: 110 CNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMV 169
Query: 197 QHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIE 256
+ G++PD Y T++D C G VN+A LF ME+ G + V Y+ L+NG C +
Sbjct: 170 EMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWR 229
Query: 257 GALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFI 316
A SL M + IKPDV+ N L + + A +L++EM R +A + +TY + I
Sbjct: 230 DADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLI 289
Query: 317 DGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLV 376
+G C G + EA ++F+ + C D+ AY SLI+G CK +++ A+++F + L
Sbjct: 290 NGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLT 349
Query: 377 PNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFI---RINEPSKV 433
N +TY+ +I G G+ + A+++F M V PN+ T+++L+ ++ + +
Sbjct: 350 GNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMI 409
Query: 434 IELLHKMKEINVMPDASIVSIVVDLLAKN 462
E + K + V P+ ++++ L N
Sbjct: 410 FEDMQKREMDGVAPNIWTYNVLLHGLCYN 438
Score = 181 bits (458), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 102/338 (30%), Positives = 175/338 (51%), Gaps = 9/338 (2%)
Query: 2 GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
G V++ + ++ PD V +TSL+ GLC R +A +L + +PDV T+
Sbjct: 191 GHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITF 250
Query: 62 TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
L++ + + A L+ EM + PN TYT++I+G C EG VD+A+++
Sbjct: 251 NALIDAFVKEGKFLDAEELYNEMIR------MSIAPNIFTYTSLINGFCMEGCVDEARQM 304
Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
M+ K P+VV YTS+I GFC K ++A ++F EM +G+ N +T+ ++ +
Sbjct: 305 FYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQ 364
Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESM---GCKHT 238
GK + A + M+ GV P+ TYN LL C G+V A +F M+ G
Sbjct: 365 VGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPN 424
Query: 239 VFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFD 298
+++Y++L++G C N ++E AL ++ +M + + ++ + + G+ + +V+ A LF
Sbjct: 425 IWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFC 484
Query: 299 EMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLR 336
+ GV + TY T I GL + G EA LF ++
Sbjct: 485 SLPSKGVKPNVVTYTTMISGLFREGLKHEAHVLFRKMK 522
Score = 179 bits (455), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 103/308 (33%), Positives = 167/308 (54%), Gaps = 9/308 (2%)
Query: 2 GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
GR +L + K PD +TF +LI E + ++A L+ ++ P++FTY
Sbjct: 226 GRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTY 285
Query: 62 TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
T+L+NG C A +F M C P+ V YT++I+G CK VD A ++
Sbjct: 286 TSLINGFCMEGCVDEARQMFYLMETKG------CFPDVVAYTSLINGFCKCKKVDDAMKI 339
Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
+M K + N +TYT++I+GF N A+ +F M+ +GV PN+ T+NV++ LC
Sbjct: 340 FYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCY 399
Query: 182 NGKMDEASRLLDLMIQH---GVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHT 238
NGK+ +A + + M + GV P+ +TYN LL G C G++ A +F M
Sbjct: 400 NGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIG 459
Query: 239 VFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFD 298
+ +Y+I+I G CK +++ A++L+ + SKG+KP+VV + T+ GLF A LF
Sbjct: 460 IITYTIIIQGMCKAGKVKNAVNLFCSLPSKGVKPNVVTYTTMISGLFREGLKHEAHVLFR 519
Query: 299 EMQRNGVA 306
+M+ +GV+
Sbjct: 520 KMKEDGVS 527
Score = 173 bits (438), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 102/364 (28%), Positives = 184/364 (50%)
Query: 116 DKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVI 175
++A +L M + P+++ +T ++ K ++ L + GV ++ T N++
Sbjct: 54 NEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCNLL 113
Query: 176 MDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGC 235
M+ C++ + AS L M++ G PD T+ +L++GFCL R+ A + M MG
Sbjct: 114 MNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGI 173
Query: 236 KHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFK 295
K V Y+ +I+ CKN + ALSL+ +M + GI+PDVV++ +L GL + A
Sbjct: 174 KPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADS 233
Query: 296 LFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLC 355
L M + + D T+ ID K G ++A EL++ + + +I Y SLI+G C
Sbjct: 234 LLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFC 293
Query: 356 KSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVI 415
G ++ A ++F + P+VV Y+ +I G C ++D A +F +M + + N I
Sbjct: 294 MEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTI 353
Query: 416 TFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEISLNSLPSFTVH 475
T+ LI+GF ++ +P+ E+ M V P+ ++++ L N +L F
Sbjct: 354 TYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDM 413
Query: 476 EQQE 479
+++E
Sbjct: 414 QKRE 417
Score = 171 bits (434), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 91/306 (29%), Positives = 163/306 (53%)
Query: 137 YTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 196
Y ++R ++ +NEA LF M++ P+++ F +++ + K K D L D +
Sbjct: 40 YREILRNGLHSLQFNEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQ 99
Query: 197 QHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIE 256
GV D +T N L++ FC + + A M +G + + +++ LING+C +E
Sbjct: 100 IMGVSHDLYTCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRME 159
Query: 257 GALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFI 316
A+S+ ++M+ GIKPDVV++ T+ L + V A LFD+M+ G+ D Y + +
Sbjct: 160 EAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLV 219
Query: 317 DGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLV 376
+GLC +G +A L + K + D+ +N+LID K G+ A EL+ + +
Sbjct: 220 NGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIA 279
Query: 377 PNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIEL 436
PN+ TY+ +I G C +G +D+AR +F ME P+V+ + LI GF + + +++
Sbjct: 280 PNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKI 339
Query: 437 LHKMKE 442
++M +
Sbjct: 340 FYEMSQ 345
Score = 84.7 bits (208), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/229 (24%), Positives = 99/229 (43%), Gaps = 10/229 (4%)
Query: 243 SILINGYCKNKEI----------EGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVER 292
S + +C +EI AL L++ M+ P ++ L + ++ + +
Sbjct: 31 SFWVRAFCNYREILRNGLHSLQFNEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDV 90
Query: 293 AFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLID 352
L D +Q GV+ D +T ++ C++ A + L E DI + SLI+
Sbjct: 91 VINLCDHLQIMGVSHDLYTCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLIN 150
Query: 353 GLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVP 412
G C R+E A+ + + + P+VV Y+ +I LC +G ++ A LF ME + P
Sbjct: 151 GFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRP 210
Query: 413 NVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
+V+ + L+ G LL M + + PD + ++D K
Sbjct: 211 DVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVK 259
>sp|Q9LFF1|PP281_ARATH Pentatricopeptide repeat-containing protein At3g53700,
chloroplastic OS=Arabidopsis thaliana GN=MEE40 PE=2 SV=1
Length = 754
Score = 266 bits (681), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 148/448 (33%), Positives = 233/448 (52%), Gaps = 19/448 (4%)
Query: 4 VSHGFVVLGRILKSC-----------FTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVF 52
+ HGF GR+ + F PD TF +L+ GLC + A + +
Sbjct: 265 IVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQE 324
Query: 53 GCEPDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKE 112
G +PDV+TY ++++GLC+ A+ + ++M + C PNTVTY T+I LCKE
Sbjct: 325 GYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRD------CSPNTVTYNTLISTLCKE 378
Query: 113 GFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTF 172
V++A EL + K I P+V T+ S+I+G C ++ A LF EM +G +P+ T+
Sbjct: 379 NQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTY 438
Query: 173 NVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMES 232
N+++D LC GK+DEA +L M G TYNTL+DGFC + A+E+F ME
Sbjct: 439 NMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEV 498
Query: 233 MGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVER 292
G +Y+ LI+G CK++ +E A L +M+ +G KPD +N+L +++
Sbjct: 499 HGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKK 558
Query: 293 AFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLID 352
A + M NG D TY T I GLCK G + A +L ++++ AYN +I
Sbjct: 559 AADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPHAYNPVIQ 618
Query: 353 GLCKSGRLEIALELFRS-LPCGVLVPNVVTYSIMIGGLCN-DGQMDKARDLFLDMEENAV 410
GL + + A+ LFR L P+ V+Y I+ GLCN G + +A D +++ E
Sbjct: 619 GLFRKRKTTEAINLFREMLEQNEAPPDAVSYRIVFRGLCNGGGPIREAVDFLVELLEKGF 678
Query: 411 VPNVITFDMLIRGFIRINEPSKVIELLH 438
VP + ML G + ++ +++L++
Sbjct: 679 VPEFSSLYMLAEGLLTLSMEETLVKLVN 706
Score = 254 bits (650), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 139/438 (31%), Positives = 237/438 (54%), Gaps = 6/438 (1%)
Query: 19 FTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVAL 78
PD TFT++++G E + A + ++ FGC + +V+G C+ AL
Sbjct: 220 LVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDAL 279
Query: 79 NLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYT 138
N +EM+N +G F P+ T+ T+++GLCK G V A E++ M + P+V TY
Sbjct: 280 NFIQEMSNQDGFF-----PDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYN 334
Query: 139 SVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQH 198
SVI G C + EA + +M+ + PN VT+N ++ LCK +++EA+ L ++
Sbjct: 335 SVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSK 394
Query: 199 GVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGA 258
G+ PD T+N+L+ G CLT A ELF M S GC+ F+Y++LI+ C +++ A
Sbjct: 395 GILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEA 454
Query: 259 LSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDG 318
L++ +M G V+ +NTL G + ++ A ++FDEM+ +GV+ ++ TY T IDG
Sbjct: 455 LNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDG 514
Query: 319 LCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPN 378
LCK+ + +A +L + + + D YNSL+ C+ G ++ A ++ +++ P+
Sbjct: 515 LCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPD 574
Query: 379 VVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLH 438
+VTY +I GLC G+++ A L ++ + ++ +I+G R + ++ I L
Sbjct: 575 IVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAINLFR 634
Query: 439 KMKEIN-VMPDASIVSIV 455
+M E N PDA IV
Sbjct: 635 EMLEQNEAPPDAVSYRIV 652
Score = 226 bits (576), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 131/416 (31%), Positives = 209/416 (50%), Gaps = 7/416 (1%)
Query: 47 TKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTII 106
K+ V+G +PDV T+ L+ LCR A+ + E+M + +G+V P+ T+TT++
Sbjct: 178 AKMSVWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPS----YGLV--PDEKTFTTVM 231
Query: 107 DGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQ-GV 165
G +EG +D A + QM + + V+ ++ GFC +A EM +Q G
Sbjct: 232 QGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGF 291
Query: 166 QPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKE 225
P+ TFN +++ LCK G + A ++D+M+Q G PD +TYN+++ G C G V A E
Sbjct: 292 FPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVE 351
Query: 226 LFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLF 285
+ M + C +Y+ LI+ CK ++E A L + SKGI PDV N+L GL
Sbjct: 352 VLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLC 411
Query: 286 EIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIR 345
A +LF+EM+ G D +TY ID LC G + EA+ + + + C +
Sbjct: 412 LTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVI 471
Query: 346 AYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDM 405
YN+LIDG CK+ + A E+F + + N VTY+ +I GLC +++ A L M
Sbjct: 472 TYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQM 531
Query: 406 EENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
P+ T++ L+ F R + K +++ M PD ++ L K
Sbjct: 532 IMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCK 587
Score = 225 bits (573), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 125/334 (37%), Positives = 186/334 (55%), Gaps = 8/334 (2%)
Query: 1 MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
+G V VL +++ +P+ VT+ +LI LC E+++ EA L L G PDV T
Sbjct: 343 LGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCT 402
Query: 61 YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
+ +L+ GLC T + VA+ LFEEM + CEP+ TY +ID LC +G +D+A
Sbjct: 403 FNSLIQGLCLTRNHRVAMELFEEMRSKG------CEPDEFTYNMLIDSLCSKGKLDEALN 456
Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
+L QM+ +V+TY ++I GFC A EA+ +F EM GV N VT+N ++D LC
Sbjct: 457 MLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLC 516
Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
K+ ++++A++L+D MI G +PD +TYN+LL FC G + A ++ +M S GC+ +
Sbjct: 517 KSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIV 576
Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
+Y LI+G CK +E A L + KGI +N + GLF + A LF EM
Sbjct: 577 TYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAINLFREM 636
Query: 301 -QRNGVAADTWTYRTFIDGLCK-NGYIVEAVELF 332
++N D +YR GLC G I EAV+
Sbjct: 637 LEQNEAPPDAVSYRIVFRGLCNGGGPIREAVDFL 670
Score = 180 bits (456), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 118/448 (26%), Positives = 217/448 (48%), Gaps = 6/448 (1%)
Query: 16 KSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTI 75
K F+P+ + ++ L + + ++ CE T+ L+ +
Sbjct: 76 KPNFSPEPALYEEILLRLGRSGSFDDMKKILEDMKSSRCEMGTSTFLILIESYAQFELQD 135
Query: 76 VALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVV 135
L++ + M + EFG+ +P+T Y +++ L + + +M IKP+V
Sbjct: 136 EILSVVDWMID---EFGL--KPDTHFYNRMLNLLVDGNSLKLVEISHAKMSVWGIKPDVS 190
Query: 136 TYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLM 195
T+ +I+ C A A + +M G+ P+ TF +M + G +D A R+ + M
Sbjct: 191 TFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQM 250
Query: 196 IQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESM-GCKHTVFSYSILINGYCKNKE 254
++ G + N ++ GFC GRV A M + G ++++ L+NG CK
Sbjct: 251 VEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGH 310
Query: 255 IEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRT 314
++ A+ + ML +G PDV +N++ GL ++ +V+ A ++ D+M + +T TY T
Sbjct: 311 VKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNT 370
Query: 315 FIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGV 374
I LCK + EA EL L D+ +NSLI GLC + +A+ELF +
Sbjct: 371 LISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKG 430
Query: 375 LVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVI 434
P+ TY+++I LC+ G++D+A ++ ME + +VIT++ LI GF + N+ +
Sbjct: 431 CEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAE 490
Query: 435 ELLHKMKEINVMPDASIVSIVVDLLAKN 462
E+ +M+ V ++ + ++D L K+
Sbjct: 491 EIFDEMEVHGVSRNSVTYNTLIDGLCKS 518
>sp|Q3EDF8|PPR28_ARATH Pentatricopeptide repeat-containing protein At1g09900
OS=Arabidopsis thaliana GN=At1g09900 PE=2 SV=1
Length = 598
Score = 265 bits (678), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 143/459 (31%), Positives = 246/459 (53%), Gaps = 9/459 (1%)
Query: 2 GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
G + GF L ++ PD + T+LI+G C + +AA + L G PDV TY
Sbjct: 116 GELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITY 175
Query: 62 TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
+++G C+ AL++ + M+ P+ VTY TI+ LC G + +A E+
Sbjct: 176 NVMISGYCKAGEINNALSVLDRMS---------VSPDVVTYNTILRSLCDSGKLKQAMEV 226
Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
L +M ++ P+V+TYT +I C A +L EM D+G P+VVT+NV+++ +CK
Sbjct: 227 LDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICK 286
Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
G++DEA + L+ M G +P+ T+N +L C TGR A++L M G +V +
Sbjct: 287 EGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVT 346
Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
++ILIN C+ + A+ + +M G +P+ + +N L G + +++RA + + M
Sbjct: 347 FNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMV 406
Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
G D TY T + LCK+G + +AVE+ + L C + YN++IDGL K+G+
Sbjct: 407 SRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTG 466
Query: 362 IALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLI 421
A++L + L P+ +TYS ++GGL +G++D+A F + E + PN +TF+ ++
Sbjct: 467 KAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIM 526
Query: 422 RGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLA 460
G + + + I+ L M P+ + +I+++ LA
Sbjct: 527 LGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLA 565
Score = 252 bits (644), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 137/455 (30%), Positives = 235/455 (51%), Gaps = 19/455 (4%)
Query: 6 HGFVVLGRILK----------SCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCE 55
GF LG+ K S PD +T+ +I G C I A ++ ++ V
Sbjct: 145 RGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRMSV---S 201
Query: 56 PDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFV 115
PDV TY T++ LC + A+ + + M + C P+ +TYT +I+ C++ V
Sbjct: 202 PDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRD------CYPDVITYTILIEATCRDSGV 255
Query: 116 DKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVI 175
A +LL +M+D+ P+VVTY ++ G C +EA + +M G QPNV+T N+I
Sbjct: 256 GHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNII 315
Query: 176 MDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGC 235
+ +C G+ +A +LL M++ G P T+N L++ C G + A ++ M GC
Sbjct: 316 LRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGC 375
Query: 236 KHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFK 295
+ SY+ L++G+CK K+++ A+ M+S+G PD+V +NT+ L + +VE A +
Sbjct: 376 QPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVE 435
Query: 296 LFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLC 355
+ +++ G + TY T IDGL K G +A++L +R + D Y+SL+ GL
Sbjct: 436 ILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLS 495
Query: 356 KSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVI 415
+ G+++ A++ F + PN VT++ ++ GLC Q D+A D + M PN
Sbjct: 496 REGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNET 555
Query: 416 TFDMLIRGFIRINEPSKVIELLHKMKEINVMPDAS 450
++ +LI G + +ELL+++ +M +S
Sbjct: 556 SYTILIEGLAYEGMAKEALELLNELCNKGLMKKSS 590
Score = 190 bits (483), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 112/417 (26%), Positives = 198/417 (47%), Gaps = 45/417 (10%)
Query: 85 ANGNGEFGVV--------CEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVT 136
+NGNG + V E N + G +EGF + L M P+++
Sbjct: 85 SNGNGHYSSVNSSFALEDVESNNHLRQMVRTGELEEGF-----KFLENMVYHGNVPDIIP 139
Query: 137 YTSVIRGFCYAKDWNEAKRLF-------------------------------IEMMDQ-G 164
T++IRGFC +A ++ + ++D+
Sbjct: 140 CTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRMS 199
Query: 165 VQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAK 224
V P+VVT+N I+ LC +GK+ +A +LD M+Q PD TY L++ C V HA
Sbjct: 200 VSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAM 259
Query: 225 ELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGL 284
+L M GC V +Y++L+NG CK ++ A+ ++M S G +P+V+ HN + +
Sbjct: 260 KLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSM 319
Query: 285 FEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDI 344
+ A KL +M R G + T+ I+ LC+ G + A+++ + C+ +
Sbjct: 320 CSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNS 379
Query: 345 RAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLD 404
+YN L+ G CK +++ A+E + P++VTY+ M+ LC DG+++ A ++
Sbjct: 380 LSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQ 439
Query: 405 MEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
+ P +IT++ +I G + + K I+LL +M+ ++ PD S +V L++
Sbjct: 440 LSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSR 496
>sp|P0C7R3|PP106_ARATH Pentatricopeptide repeat-containing protein At1g64583,
mitochondrial OS=Arabidopsis thaliana GN=At1g64583 PE=2
SV=1
Length = 512
Score = 259 bits (663), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 142/392 (36%), Positives = 219/392 (55%), Gaps = 6/392 (1%)
Query: 20 TPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALN 79
+ D +FT LI C SR+ A ++ K+ G EP + T+ +L++G C + A +
Sbjct: 103 SHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFS 162
Query: 80 LFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTS 139
L M EPN V Y T+IDGLCK G ++ A ELL +M+ K + +VVTY +
Sbjct: 163 LVILMVKSG------YEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNT 216
Query: 140 VIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHG 199
++ G CY+ W++A R+ +MM + + P+VVTF ++D K G +DEA L MIQ
Sbjct: 217 LLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSS 276
Query: 200 VRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGAL 259
V P+ TYN++++G C+ GR+ AK+ F M S GC V +Y+ LI+G+CK + ++ +
Sbjct: 277 VDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGM 336
Query: 260 SLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGL 319
L+ M +G D+ +NTL G ++ ++ A +F M V D T+ + GL
Sbjct: 337 KLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGL 396
Query: 320 CKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNV 379
C NG I A+ F +R + I AYN +I GLCK+ ++E A ELF LP + P+
Sbjct: 397 CVNGEIESALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDA 456
Query: 380 VTYSIMIGGLCNDGQMDKARDLFLDMEENAVV 411
TY+IMI GLC +G +A +L M+E ++
Sbjct: 457 RTYTIMILGLCKNGPRREADELIRRMKEEGII 488
Score = 218 bits (556), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 136/441 (30%), Positives = 224/441 (50%), Gaps = 8/441 (1%)
Query: 3 RVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFT-KLRVFGCEPDVFTY 61
R F + ++ S P V FT L+ A R E F+ K+ ++G D++++
Sbjct: 51 RFEDAFALFFEMVHSQPLPSIVDFTRLLTA-TANLRRYETVIYFSQKMELYGISHDLYSF 109
Query: 62 TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
T L++ CR S AL++ +M + G EP+ VT+ +++ G C + A L
Sbjct: 110 TILIHCFCRCSRLSFALSVLGKMM----KLGY--EPSIVTFGSLLHGFCLVNRIGDAFSL 163
Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
++ M +PNVV Y ++I G C + N A L EM +G+ +VVT+N ++ LC
Sbjct: 164 VILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCY 223
Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
+G+ +A+R+L M++ + PD T+ L+D F G ++ A+EL+ M +
Sbjct: 224 SGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVT 283
Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
Y+ +ING C + + A + M SKG P+VV +NTL G + V+ KLF M
Sbjct: 284 YNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMS 343
Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
G AD +TY T I G C+ G + A+++F + + DI + L+ GLC +G +E
Sbjct: 344 CEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIE 403
Query: 362 IALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLI 421
AL F + +V Y+IMI GLC +++KA +LF + V P+ T+ ++I
Sbjct: 404 SALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMI 463
Query: 422 RGFIRINEPSKVIELLHKMKE 442
G + + EL+ +MKE
Sbjct: 464 LGLCKNGPRREADELIRRMKE 484
Score = 200 bits (509), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 119/345 (34%), Positives = 178/345 (51%), Gaps = 16/345 (4%)
Query: 2 GRVSHGFVVLGRI----------LKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRV 51
G + HGF ++ RI +KS + P+ V + +LI GLC + A L ++
Sbjct: 145 GSLLHGFCLVNRIGDAFSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEK 204
Query: 52 FGCEPDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCK 111
G DV TY TL+ GLC + A + +M + P+ VT+T +ID K
Sbjct: 205 KGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRS------INPDVVTFTALIDVFVK 258
Query: 112 EGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVT 171
+G +D+A+EL +M ++ PN VTY S+I G C +AK+ F M +G PNVVT
Sbjct: 259 QGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVT 318
Query: 172 FNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSME 231
+N ++ CK +DE +L M G D FTYNTL+ G+C G++ A ++F M
Sbjct: 319 YNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMV 378
Query: 232 SMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVE 291
S + ++ IL++G C N EIE AL + +M +V +N + GL + +VE
Sbjct: 379 SRRVTPDIITHCILLHGLCVNGEIESALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVE 438
Query: 292 RAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLR 336
+A++LF + GV D TY I GLCKNG EA EL ++
Sbjct: 439 KAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADELIRRMK 483
Score = 157 bits (398), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 96/333 (28%), Positives = 161/333 (48%)
Query: 116 DKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVI 175
+ A L +M P++V +T ++ + + +M G+ ++ +F ++
Sbjct: 53 EDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFTIL 112
Query: 176 MDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGC 235
+ C+ ++ A +L M++ G P T+ +LL GFCL R+ A L + M G
Sbjct: 113 IHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGY 172
Query: 236 KHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFK 295
+ V Y+ LI+G CKN E+ AL L +EM KG+ DVV +NTL GL + A +
Sbjct: 173 EPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAAR 232
Query: 296 LFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLC 355
+ +M + + D T+ ID K G + EA EL+ + + + YNS+I+GLC
Sbjct: 233 MLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLC 292
Query: 356 KSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVI 415
GRL A + F + PNVVTY+ +I G C +D+ LF M ++
Sbjct: 293 MHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIF 352
Query: 416 TFDMLIRGFIRINEPSKVIELLHKMKEINVMPD 448
T++ LI G+ ++ + +++ M V PD
Sbjct: 353 TYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPD 385
Score = 87.4 bits (215), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/242 (23%), Positives = 109/242 (45%), Gaps = 1/242 (0%)
Query: 245 LINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNG 304
L G+ + E A +L+ EM+ P +V L + + E +M+ G
Sbjct: 42 LRTGFLHSIRFEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYG 101
Query: 305 VAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIAL 364
++ D +++ I C+ + A+ + + L E I + SL+ G C R+ A
Sbjct: 102 ISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAF 161
Query: 365 ELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGF 424
L + PNVV Y+ +I GLC +G+++ A +L +ME+ + +V+T++ L+ G
Sbjct: 162 SLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGL 221
Query: 425 IRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEISLNSLPSFTVHEQQEEVDES 484
S +L M + ++ PD + ++D+ K + +L+ Q VD +
Sbjct: 222 CYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVK-QGNLDEAQELYKEMIQSSVDPN 280
Query: 485 NV 486
NV
Sbjct: 281 NV 282
>sp|Q9FMD3|PP389_ARATH Pentatricopeptide repeat-containing protein At5g16640,
mitochondrial OS=Arabidopsis thaliana GN=At5g16640 PE=2
SV=1
Length = 504
Score = 258 bits (660), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 140/385 (36%), Positives = 219/385 (56%), Gaps = 6/385 (1%)
Query: 29 LIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEEMANGN 88
L+ C S++ A + K+ G EP + T+ +L+NG CR AL +F++M
Sbjct: 122 LLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMV--- 178
Query: 89 GEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAK 148
G+ +PN V Y TIIDGLCK VD A +LL +M+ I P+VVTY S+I G C +
Sbjct: 179 ---GMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSG 235
Query: 149 DWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYN 208
W++A R+ M + + P+V TFN ++D K G++ EA + MI+ + PD TY+
Sbjct: 236 RWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYS 295
Query: 209 TLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSK 268
L+ G C+ R++ A+E+F M S GC V +YSILINGYCK+K++E + L+ EM +
Sbjct: 296 LLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQR 355
Query: 269 GIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEA 328
G+ + V + L G ++ A ++F M GV + TY + GLC NG I +A
Sbjct: 356 GVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKA 415
Query: 329 VELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGG 388
+ + ++ + DI YN +I G+CK+G + A +++ SL C L+P++ TY+ M+ G
Sbjct: 416 LVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLG 475
Query: 389 LCNDGQMDKARDLFLDMEENAVVPN 413
L G +A LF M+E+ ++PN
Sbjct: 476 LYKKGLRREADALFRKMKEDGILPN 500
Score = 229 bits (584), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 129/432 (29%), Positives = 222/432 (51%), Gaps = 6/432 (1%)
Query: 21 PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
P F+ L+ + + L+ ++++ G ++ T L+N CR S +AL+
Sbjct: 79 PSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSF 138
Query: 81 FEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSV 140
+M E P+ VT+ ++++G C+ V A + QM KPNVV Y ++
Sbjct: 139 LGKMIKLGHE------PSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTI 192
Query: 141 IRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGV 200
I G C +K + A L M G+ P+VVT+N ++ LC +G+ +A+R++ M + +
Sbjct: 193 IDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREI 252
Query: 201 RPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALS 260
PD FT+N L+D GRV+ A+E + M + +YS+LI G C ++ A
Sbjct: 253 YPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEE 312
Query: 261 LYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLC 320
++ M+SKG PDVV ++ L G + +VE KLF EM + GV +T TY I G C
Sbjct: 313 MFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYC 372
Query: 321 KNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVV 380
+ G + A E+F + +I YN L+ GLC +G++E AL + + + ++V
Sbjct: 373 RAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIV 432
Query: 381 TYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKM 440
TY+I+I G+C G++ A D++ + ++P++ T+ ++ G + + L KM
Sbjct: 433 TYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKGLRREADALFRKM 492
Query: 441 KEINVMPDASIV 452
KE ++P+ V
Sbjct: 493 KEDGILPNECYV 504
Score = 223 bits (568), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 117/377 (31%), Positives = 205/377 (54%), Gaps = 8/377 (2%)
Query: 3 RVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYT 62
++S LG+++K P VTF SL+ G C R+ +A +F ++ G +P+V Y
Sbjct: 131 QLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYN 190
Query: 63 TLVNGLCRTSHTIVALNLFEEM-ANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
T+++GLC++ AL+L M +G G P+ VTY ++I GLC G A +
Sbjct: 191 TIIDGLCKSKQVDNALDLLNRMEKDGIG-------PDVVTYNSLISGLCSSGRWSDATRM 243
Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
+ M + I P+V T+ ++I +EA+ + EM+ + + P++VT+++++ LC
Sbjct: 244 VSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCM 303
Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
++DEA + M+ G PD TY+ L++G+C + +V H +LF M G +
Sbjct: 304 YSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVT 363
Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
Y+ILI GYC+ ++ A ++ M+ G+ P+++ +N L GL + ++E+A + +MQ
Sbjct: 364 YTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQ 423
Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
+NG+ AD TY I G+CK G + +A +++ +L DI Y +++ GL K G
Sbjct: 424 KNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKGLRR 483
Query: 362 IALELFRSLPCGVLVPN 378
A LFR + ++PN
Sbjct: 484 EADALFRKMKEDGILPN 500
Score = 177 bits (448), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 104/348 (29%), Positives = 177/348 (50%)
Query: 115 VDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNV 174
+D + +L M P++ ++ ++ K ++ L+ +M G+ N+ T N+
Sbjct: 62 LDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNI 121
Query: 175 IMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMG 234
+++ C+ ++ A L MI+ G P T+ +LL+GFC RV A +F M MG
Sbjct: 122 LLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMG 181
Query: 235 CKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAF 294
K V Y+ +I+G CK+K+++ AL L + M GI PDVV +N+L GL + A
Sbjct: 182 YKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDAT 241
Query: 295 KLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGL 354
++ M + + D +T+ ID K G + EA E + + + DI Y+ LI GL
Sbjct: 242 RMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGL 301
Query: 355 CKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNV 414
C RL+ A E+F + P+VVTYSI+I G C +++ LF +M + VV N
Sbjct: 302 CMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNT 361
Query: 415 ITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKN 462
+T+ +LI+G+ R + + E+ +M V P+ ++++ L N
Sbjct: 362 VTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDN 409
Score = 158 bits (399), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 93/336 (27%), Positives = 172/336 (51%), Gaps = 20/336 (5%)
Query: 141 IRGFCYAK-------DWNEAKR-------------LFIEMMDQGVQPNVVTFNVIMDELC 180
I GFC+++ D+ E R LF M+ P++ F+ ++ +
Sbjct: 33 ICGFCFSRRAYSNGSDYREMLRNGIRFMKLDDSLDLFFHMVQCRPLPSIADFSRLLSAIS 92
Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
K K D L + M G+ + T N LL+ FC +++ A M +G + ++
Sbjct: 93 KMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIV 152
Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
++ L+NG+C+ + AL ++ +M+ G KP+VVI+NT+ GL + QV+ A L + M
Sbjct: 153 TFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRM 212
Query: 301 QRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRL 360
+++G+ D TY + I GLC +G +A + + + D+ +N+LID K GR+
Sbjct: 213 EKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRV 272
Query: 361 EIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDML 420
A E + + L P++VTYS++I GLC ++D+A ++F M P+V+T+ +L
Sbjct: 273 SEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSIL 332
Query: 421 IRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVV 456
I G+ + + ++L +M + V+ + +I++
Sbjct: 333 INGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILI 368
Score = 154 bits (390), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 87/272 (31%), Positives = 144/272 (52%), Gaps = 6/272 (2%)
Query: 2 GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
GR S ++ + K PD TF +LI E R+ EA + ++ +PD+ TY
Sbjct: 235 GRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTY 294
Query: 62 TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
+ L+ GLC S A +F M + C P+ VTY+ +I+G CK V+ +L
Sbjct: 295 SLLIYGLCMYSRLDEAEEMFGFMVSKG------CFPDVVTYSILINGYCKSKKVEHGMKL 348
Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
+M + + N VTYT +I+G+C A N A+ +F M+ GV PN++T+NV++ LC
Sbjct: 349 FCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCD 408
Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
NGK+++A +L M ++G+ D TYN ++ G C G V A +++ S+ G +++
Sbjct: 409 NGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWT 468
Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPD 273
Y+ ++ G K A +L+ +M GI P+
Sbjct: 469 YTTMMLGLYKKGLRREADALFRKMKEDGILPN 500
Score = 87.0 bits (214), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 104/236 (44%), Gaps = 20/236 (8%)
Query: 246 INGYCKNKEIEGALSLYSEMLSKGIK--------------------PDVVIHNTLFVGLF 285
I G+C ++ S Y EML GI+ P + + L +
Sbjct: 33 ICGFCFSRRAYSNGSDYREMLRNGIRFMKLDDSLDLFFHMVQCRPLPSIADFSRLLSAIS 92
Query: 286 EIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIR 345
++ + + L+++MQ G+ + T ++ C+ + A+ + L E I
Sbjct: 93 KMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIV 152
Query: 346 AYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDM 405
+ SL++G C+ R+ AL +F + PNVV Y+ +I GLC Q+D A DL M
Sbjct: 153 TFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRM 212
Query: 406 EENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
E++ + P+V+T++ LI G S ++ M + + PD + ++D K
Sbjct: 213 EKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVK 268
Score = 42.0 bits (97), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 28/143 (19%), Positives = 67/143 (46%)
Query: 327 EAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMI 386
++++LF + + I ++ L+ + K + ++ + L+ + + N+ T +I++
Sbjct: 64 DSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILL 123
Query: 387 GGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVM 446
C Q+ A M + P+++TF L+ GF R + + + +M +
Sbjct: 124 NCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYK 183
Query: 447 PDASIVSIVVDLLAKNEISLNSL 469
P+ I + ++D L K++ N+L
Sbjct: 184 PNVVIYNTIIDGLCKSKQVDNAL 206
>sp|Q9FIX3|PP407_ARATH Pentatricopeptide repeat-containing protein At5g39710
OS=Arabidopsis thaliana GN=EMB2745 PE=2 SV=1
Length = 747
Score = 250 bits (639), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 135/412 (32%), Positives = 221/412 (53%), Gaps = 6/412 (1%)
Query: 10 VLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLC 69
V +L+S +P+ T+ LI+G C I A LF K+ GC P+V TY TL++G C
Sbjct: 192 VFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYC 251
Query: 70 RTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKN 129
+ L MA EPN ++Y +I+GLC+EG + + +L +M +
Sbjct: 252 KLRKIDDGFKLLRSMALKG------LEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRG 305
Query: 130 IKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEAS 189
+ VTY ++I+G+C ++++A + EM+ G+ P+V+T+ ++ +CK G M+ A
Sbjct: 306 YSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAM 365
Query: 190 RLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGY 249
LD M G+ P+ TY TL+DGF G +N A + M G +V +Y+ LING+
Sbjct: 366 EFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGH 425
Query: 250 CKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADT 309
C ++E A+++ +M KG+ PDVV ++T+ G + V+ A ++ EM G+ DT
Sbjct: 426 CVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDT 485
Query: 310 WTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRS 369
TY + I G C+ EA +L+ + + D Y +LI+ C G LE AL+L
Sbjct: 486 ITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNE 545
Query: 370 LPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLI 421
+ ++P+VVTYS++I GL + +A+ L L + VP+ +T+ LI
Sbjct: 546 MVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLI 597
Score = 229 bits (584), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 150/490 (30%), Positives = 247/490 (50%), Gaps = 36/490 (7%)
Query: 1 MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
+ ++ GF +L + P+ +++ +I GLC E R+ E + + T++ G D T
Sbjct: 253 LRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVT 312
Query: 61 YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
Y TL+ G C+ + AL + EM G+ P+ +TYT++I +CK G +++A E
Sbjct: 313 YNTLIKGYCKEGNFHQALVMHAEML----RHGLT--PSVITYTSLIHSMCKAGNMNRAME 366
Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
L QM+ + + PN TYT+++ GF NEA R+ EM D G P+VVT+N +++ C
Sbjct: 367 FLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHC 426
Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
GKM++A +L+ M + G+ PD +Y+T+L GFC + V+ A + M G K
Sbjct: 427 VTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTI 486
Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
+YS LI G+C+ + + A LY EML G+ PD + L +E+A +L +EM
Sbjct: 487 TYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEM 546
Query: 301 QRNGVAADTWTYRTFIDGLCKNGYIVEAVEL---------------FHTLRILKCE-FDI 344
GV D TY I+GL K EA L +HTL I C +
Sbjct: 547 VEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTL-IENCSNIEF 605
Query: 345 RAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLD 404
++ SLI G C G + A ++F S+ P+ Y+IMI G C G + KA L+ +
Sbjct: 606 KSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKE 665
Query: 405 MEENAVVPNVITFDMLIRGFI---RINEPSKVIELLHKMKEINVMPDASIV--------- 452
M ++ + + +T L++ ++NE + VI + + E++ A ++
Sbjct: 666 MVKSGFLLHTVTVIALVKALHKEGKVNELNSVIVHVLRSCELSEAEQAKVLVEINHREGN 725
Query: 453 -SIVVDLLAK 461
+V+D+LA+
Sbjct: 726 MDVVLDVLAE 735
Score = 216 bits (549), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 127/465 (27%), Positives = 228/465 (49%), Gaps = 56/465 (12%)
Query: 2 GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
GR+ VL + + ++ D VT+ +LIKG C E +A + ++ G P V TY
Sbjct: 289 GRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITY 348
Query: 62 TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
T+L++ +C+ + A+ ++M +C PN TYTT++DG ++G++++A +
Sbjct: 349 TSLIHSMCKAGNMNRAMEFLDQM-----RVRGLC-PNERTYTTLVDGFSQKGYMNEAYRV 402
Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
L +M D P+VVTY ++I G C +A + +M ++G+ P+VV+++ ++ C+
Sbjct: 403 LREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCR 462
Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
+ +DEA R+ M++ G++PD TY++L+ GFC R A +L+ M +G F+
Sbjct: 463 SYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFT 522
Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
Y+ LIN YC ++E AL L++EM+ KG+ PDVV ++ L GL + + A +L ++
Sbjct: 523 YTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLF 582
Query: 302 RNGVAADTWTYRTFID---------------GLCKNGYIVEAVELFHTLRILKCEFDIRA 346
TY T I+ G C G + EA ++F ++ + D A
Sbjct: 583 YEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTA 642
Query: 347 YNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQ------------ 394
YN +I G C++G + A L++ + + + VT ++ L +G+
Sbjct: 643 YNIMIHGHCRAGDIRKAYTLYKEMVKSGFLLHTVTVIALVKALHKEGKVNELNSVIVHVL 702
Query: 395 -----------------------MDKARDLFLDMEENAVVPNVIT 416
MD D+ +M ++ +PN I+
Sbjct: 703 RSCELSEAEQAKVLVEINHREGNMDVVLDVLAEMAKDGFLPNGIS 747
Score = 209 bits (532), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 107/353 (30%), Positives = 186/353 (52%), Gaps = 1/353 (0%)
Query: 97 PNTVTYTTIIDGLCKEGF-VDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKR 155
P ++Y ++D + + A+ + +M + + PNV TY +IRGFC+A + + A
Sbjct: 167 PGVLSYNAVLDATIRSKRNISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALT 226
Query: 156 LFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFC 215
LF +M +G PNVVT+N ++D CK K+D+ +LL M G+ P+ +YN +++G C
Sbjct: 227 LFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLC 286
Query: 216 LTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVV 275
GR+ + M G +Y+ LI GYCK AL +++EML G+ P V+
Sbjct: 287 REGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVI 346
Query: 276 IHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTL 335
+ +L + + + RA + D+M+ G+ + TY T +DG + GY+ EA + +
Sbjct: 347 TYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREM 406
Query: 336 RILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQM 395
+ YN+LI+G C +G++E A+ + + L P+VV+YS ++ G C +
Sbjct: 407 NDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDV 466
Query: 396 DKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPD 448
D+A + +M E + P+ IT+ LI+GF + +L +M + + PD
Sbjct: 467 DEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPD 519
Score = 139 bits (349), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 80/277 (28%), Positives = 139/277 (50%), Gaps = 1/277 (0%)
Query: 172 FNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGR-VNHAKELFVSM 230
F++++ + +D+A ++ L HG P +YN +LD + R ++ A+ +F M
Sbjct: 137 FDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEM 196
Query: 231 ESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQV 290
VF+Y+ILI G+C I+ AL+L+ +M +KG P+VV +NTL G ++ ++
Sbjct: 197 LESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKI 256
Query: 291 ERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSL 350
+ FKL M G+ + +Y I+GLC+ G + E + + D YN+L
Sbjct: 257 DDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTL 316
Query: 351 IDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAV 410
I G CK G AL + + L P+V+TY+ +I +C G M++A + M +
Sbjct: 317 IKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGL 376
Query: 411 VPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMP 447
PN T+ L+ GF + ++ +L +M + P
Sbjct: 377 CPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSP 413
Score = 96.7 bits (239), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 99/193 (51%), Gaps = 1/193 (0%)
Query: 235 CKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLF-VGLFEIHQVERA 293
C T + +++ Y + I+ ALS+ + G P V+ +N + + + A
Sbjct: 130 CYSTSSVFDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFA 189
Query: 294 FKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDG 353
+F EM + V+ + +TY I G C G I A+ LF + C ++ YN+LIDG
Sbjct: 190 ENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDG 249
Query: 354 LCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPN 413
CK +++ +L RS+ L PN+++Y+++I GLC +G+M + + +M +
Sbjct: 250 YCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLD 309
Query: 414 VITFDMLIRGFIR 426
+T++ LI+G+ +
Sbjct: 310 EVTYNTLIKGYCK 322
>sp|Q9FMF6|PP444_ARATH Pentatricopeptide repeat-containing protein At5g64320,
mitochondrial OS=Arabidopsis thaliana GN=At5g64320 PE=2
SV=1
Length = 730
Score = 248 bits (632), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 148/451 (32%), Positives = 230/451 (50%), Gaps = 30/451 (6%)
Query: 3 RVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYT 62
RV+ +L + PDA TF +I GLC RI EAA + ++ + G PD TY
Sbjct: 267 RVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYG 326
Query: 63 TLVNGLCRTSHTIVALNLFEEMANGN----------------------------GEFGVV 94
L+NGLC+ A +LF + +G+V
Sbjct: 327 YLMNGLCKIGRVDAAKDLFYRIPKPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIV 386
Query: 95 CEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAK 154
P+ TY ++I G KEG V A E+L M++K KPNV +YT ++ GFC +EA
Sbjct: 387 --PDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAY 444
Query: 155 RLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGF 214
+ EM G++PN V FN ++ CK ++ EA + M + G +PD +T+N+L+ G
Sbjct: 445 NVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGL 504
Query: 215 CLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDV 274
C + HA L M S G +Y+ LIN + + EI+ A L +EM+ +G D
Sbjct: 505 CEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDE 564
Query: 275 VIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHT 334
+ +N+L GL +V++A LF++M R+G A + I+GLC++G + EAVE
Sbjct: 565 ITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKE 624
Query: 335 LRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQ 394
+ + DI +NSLI+GLC++GR+E L +FR L + P+ VT++ ++ LC G
Sbjct: 625 MVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGF 684
Query: 395 MDKARDLFLDMEENAVVPNVITFDMLIRGFI 425
+ A L + E+ VPN T+ +L++ I
Sbjct: 685 VYDACLLLDEGIEDGFVPNHRTWSILLQSII 715
Score = 228 bits (582), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 135/442 (30%), Positives = 230/442 (52%), Gaps = 11/442 (2%)
Query: 21 PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
P++V + +LI L +R+ EA L ++ + GC PD T+ ++ GLC+ +N
Sbjct: 250 PNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDR----INE 305
Query: 81 FEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSV 140
+M N G P+ +TY +++GLCK G VD AK+L ++ KP +V + ++
Sbjct: 306 AAKMVNRMLIRGFA--PDDITYGYLMNGLCKIGRVDAAKDLFYRIP----KPEIVIFNTL 359
Query: 141 IRGFCYAKDWNEAKRLFIEMMDQ-GVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHG 199
I GF ++AK + +M+ G+ P+V T+N ++ K G + A +L M G
Sbjct: 360 IHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKG 419
Query: 200 VRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGAL 259
+P+ ++Y L+DGFC G+++ A + M + G K ++ LI+ +CK I A+
Sbjct: 420 CKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAV 479
Query: 260 SLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGL 319
++ EM KG KPDV N+L GL E+ +++ A L +M GV A+T TY T I+
Sbjct: 480 EIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAF 539
Query: 320 CKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNV 379
+ G I EA +L + + D YNSLI GLC++G ++ A LF + P+
Sbjct: 540 LRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSN 599
Query: 380 VTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHK 439
++ +I+I GLC G +++A + +M P+++TF+ LI G R + + K
Sbjct: 600 ISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRK 659
Query: 440 MKEINVMPDASIVSIVVDLLAK 461
++ + PD + ++ L K
Sbjct: 660 LQAEGIPPDTVTFNTLMSWLCK 681
Score = 196 bits (498), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 136/454 (29%), Positives = 221/454 (48%), Gaps = 18/454 (3%)
Query: 13 RILKSC---FTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLC 69
R + SC F V L+ G C + AA +F + P +FT+ ++ C
Sbjct: 173 RNVYSCEPTFKSYNVVLEILVSGNCHKV----AANVFYDMLSRKIPPTLFTFGVVMKAFC 228
Query: 70 RTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKN 129
+ AL+L +M C PN+V Y T+I L K V++A +LL +M
Sbjct: 229 AVNEIDSALSLLRDMTKHG------CVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMG 282
Query: 130 IKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEAS 189
P+ T+ VI G C NEA ++ M+ +G P+ +T+ +M+ LCK G++D A
Sbjct: 283 CVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAK 342
Query: 190 RLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSM-ESMGCKHTVFSYSILING 248
L + +P+ +NTL+ GF GR++ AK + M S G V +Y+ LI G
Sbjct: 343 DLFYRI----PKPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYG 398
Query: 249 YCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAAD 308
Y K + AL + +M +KG KP+V + L G ++ +++ A+ + +EM +G+ +
Sbjct: 399 YWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPN 458
Query: 309 TWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFR 368
T + I CK I EAVE+F + C+ D+ +NSLI GLC+ ++ AL L R
Sbjct: 459 TVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLR 518
Query: 369 SLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRIN 428
+ +V N VTY+ +I G++ +AR L +M + IT++ LI+G R
Sbjct: 519 DMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAG 578
Query: 429 EPSKVIELLHKMKEINVMPDASIVSIVVDLLAKN 462
E K L KM P +I+++ L ++
Sbjct: 579 EVDKARSLFEKMLRDGHAPSNISCNILINGLCRS 612
Score = 159 bits (402), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 115/455 (25%), Positives = 201/455 (44%), Gaps = 52/455 (11%)
Query: 57 DVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEF-------------GVVCEPNTVTYT 103
++F++T NG H+ + NGEF G+V + + +
Sbjct: 96 ELFSWTGSQNGY---RHSFDVYQVLIGKLGANGEFKTIDRLLIQMKDEGIVFKESL--FI 150
Query: 104 TIIDGLCKEGFVDKAKELLLQMKD-KNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMD 162
+I+ K GF + L+L+M++ + +P +Y V+ A +F +M+
Sbjct: 151 SIMRDYDKAGFPGQTTRLMLEMRNVYSCEPTFKSYNVVLEILVSGNCHKVAANVFYDMLS 210
Query: 163 QGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNH 222
+ + P + TF V+M C ++D A LL M +HG P++ Y TL+ RVN
Sbjct: 211 RKIPPTLFTFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNE 270
Query: 223 AKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFV 282
A +L M MGC +++ +I G CK I A + + ML +G PD + + L
Sbjct: 271 ALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMN 330
Query: 283 GLFEIHQVERAFKLF--------------------------------DEMQRNGVAADTW 310
GL +I +V+ A LF D + G+ D
Sbjct: 331 GLCKIGRVDAAKDLFYRIPKPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVC 390
Query: 311 TYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSL 370
TY + I G K G + A+E+ H +R C+ ++ +Y L+DG CK G+++ A + +
Sbjct: 391 TYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEM 450
Query: 371 PCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEP 430
L PN V ++ +I C + ++ +A ++F +M P+V TF+ LI G ++E
Sbjct: 451 SADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEI 510
Query: 431 SKVIELLHKMKEINVMPDASIVSIVVD-LLAKNEI 464
+ LL M V+ + + +++ L + EI
Sbjct: 511 KHALWLLRDMISEGVVANTVTYNTLINAFLRRGEI 545
Score = 81.6 bits (200), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 84/166 (50%), Gaps = 6/166 (3%)
Query: 22 DAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLF 81
D +T+ SLIKGLC + +A +LF K+ G P + L+NGLCR+ A+
Sbjct: 563 DEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQ 622
Query: 82 EEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVI 141
+EM P+ VT+ ++I+GLC+ G ++ + +++ + I P+ VT+ +++
Sbjct: 623 KEMVLRGST------PDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLM 676
Query: 142 RGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDE 187
C +A L E ++ G PN T+++++ + +D
Sbjct: 677 SWLCKGGFVYDACLLLDEGIEDGFVPNHRTWSILLQSIIPQETLDR 722
>sp|Q9FIT7|PP442_ARATH Pentatricopeptide repeat-containing protein At5g61990,
mitochondrial OS=Arabidopsis thaliana GN=At5g61990 PE=2
SV=1
Length = 974
Score = 247 bits (631), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 147/504 (29%), Positives = 254/504 (50%), Gaps = 44/504 (8%)
Query: 4 VSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTT 63
V G+ +L + K T+ +++KG+C+ + A + ++ GC P+V YTT
Sbjct: 398 VRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTT 457
Query: 64 LVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLL 123
L+ + S A+ + +EM E G+ P+ Y ++I GL K +D+A+ L+
Sbjct: 458 LIKTFLQNSRFGDAMRVLKEMK----EQGIA--PDIFCYNSLIIGLSKAKRMDEARSFLV 511
Query: 124 QMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNG 183
+M + +KPN TY + I G+ A ++ A + EM + GV PN V +++E CK G
Sbjct: 512 EMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKG 571
Query: 184 KMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYS 243
K+ EA M+ G+ DA TY L++G +V+ A+E+F M G VFSY
Sbjct: 572 KVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYG 631
Query: 244 ILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRN 303
+LING+ K ++ A S++ EM+ +G+ P+V+I+N L G ++E+A +L DEM
Sbjct: 632 VLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVK 691
Query: 304 GVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIA 363
G+ + TY T IDG CK+G + EA LF +++ D Y +L+DG C+ +E A
Sbjct: 692 GLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERA 751
Query: 364 LELF---------RSLPCGVLV-----------------------------PNVVTYSIM 385
+ +F + P L+ PN VTY+IM
Sbjct: 752 ITIFGTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIM 811
Query: 386 IGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINV 445
I LC +G ++ A++LF M+ ++P VIT+ L+ G+ ++ +++ + + +
Sbjct: 812 IDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGI 871
Query: 446 MPDASIVSIVVDLLAKNEISLNSL 469
PD + S++++ K ++ +L
Sbjct: 872 EPDHIMYSVIINAFLKEGMTTKAL 895
Score = 223 bits (568), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 131/468 (27%), Positives = 225/468 (48%), Gaps = 29/468 (6%)
Query: 19 FTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVAL 78
P T+ LI GLC R+ +A +L ++ G D TY+ L++GL + + A
Sbjct: 273 LVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAK 332
Query: 79 NLFEEMANG-----------------------------NGEFGVVCEPNTVTYTTIIDGL 109
L EM + +G P Y ++I+G
Sbjct: 333 GLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGY 392
Query: 110 CKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNV 169
C+E V + ELL++MK +NI + TY +V++G C + D + A + EM+ G +PNV
Sbjct: 393 CREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNV 452
Query: 170 VTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVS 229
V + ++ +N + +A R+L M + G+ PD F YN+L+ G R++ A+ V
Sbjct: 453 VIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVE 512
Query: 230 MESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQ 289
M G K F+Y I+GY + E A EM G+ P+ V+ L + +
Sbjct: 513 MVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGK 572
Query: 290 VERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNS 349
V A + M G+ D TY ++GL KN + +A E+F +R D+ +Y
Sbjct: 573 VIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGV 632
Query: 350 LIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENA 409
LI+G K G ++ A +F + L PNV+ Y++++GG C G+++KA++L +M
Sbjct: 633 LINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKG 692
Query: 410 VVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVD 457
+ PN +T+ +I G+ + + ++ L +MK ++PD+ + + +VD
Sbjct: 693 LHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVD 740
Score = 164 bits (414), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 114/414 (27%), Positives = 185/414 (44%), Gaps = 51/414 (12%)
Query: 21 PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
P+ V T LI C + +++EA + + + G D TYT L+NGL + A +
Sbjct: 555 PNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEI 614
Query: 81 FEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSV 140
F EM G G P+ +Y +I+G K G + KA + +M ++ + PNV+ Y +
Sbjct: 615 FREM-RGKG-----IAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNML 668
Query: 141 IRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGV 200
+ GFC + + +AK L EM +G+ PN VT+ I+D CK+G + EA RL D M G+
Sbjct: 669 LGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGL 728
Query: 201 RPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHT----------VF---------- 240
PD+F Y TL+DG C V A +F GC + VF
Sbjct: 729 VPDSFVYTTLVDGCCRLNDVERAITIF-GTNKKGCASSTAPFNALINWVFKFGKTELKTE 787
Query: 241 -------------------SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLF 281
+Y+I+I+ CK +E A L+ +M + + P V+ + +L
Sbjct: 788 VLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLL 847
Query: 282 VGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILK-- 339
G ++ + F +FDE G+ D Y I+ K G +A+ L +
Sbjct: 848 NGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAV 907
Query: 340 ---CEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLC 390
C+ I +L+ G K G +E+A ++ ++ +P+ T +I C
Sbjct: 908 DDGCKLSISTCRALLSGFAKVGEMEVAEKVMENMVRLQYIPDSATVIELINESC 961
Score = 152 bits (385), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 144/569 (25%), Positives = 232/569 (40%), Gaps = 132/569 (23%)
Query: 20 TPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALN 79
+ D V F L G A+ I EA +F+ P + L++ L R + L+
Sbjct: 148 SDDGVLFGILFDGYIAKGYIEEAVFVFSSSMGLELVPRLSRCKVLLDALLRWNR----LD 203
Query: 80 LFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELL----------------- 122
LF ++ G E VV + T Y +I C+ G V K++L
Sbjct: 204 LFWDVYKGMVERNVVFDVKT--YHMLIIAHCRAGNVQLGKDVLFKTEKEFRTATLNVDGA 261
Query: 123 LQMKD----KNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDE 178
L++K+ K + P TY +I G C K +AK L +EM GV + T+++++D
Sbjct: 262 LKLKESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDG 321
Query: 179 LCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHT 238
L K D A L+ M+ HG+ + Y+ + G + AK LF M + G
Sbjct: 322 LLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQ 381
Query: 239 VFSYSILINGYCKNK-----------------------------------EIEGALSLYS 263
+Y+ LI GYC+ K +++GA ++
Sbjct: 382 AQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVK 441
Query: 264 EMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCK-- 321
EM++ G +P+VVI+ TL + + A ++ EM+ G+A D + Y + I GL K
Sbjct: 442 EMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAK 501
Query: 322 -----NGYIVEAVE-----------LFHTLRILKCEF--------DIR------------ 345
++VE VE F + I EF ++R
Sbjct: 502 RMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCT 561
Query: 346 -----------------AYNSLID---------------GLCKSGRLEIALELFRSLPCG 373
AY S++D GL K+ +++ A E+FR +
Sbjct: 562 GLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGK 621
Query: 374 VLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKV 433
+ P+V +Y ++I G G M KA +F +M E + PNVI ++ML+ GF R E K
Sbjct: 622 GIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKA 681
Query: 434 IELLHKMKEINVMPDASIVSIVVDLLAKN 462
ELL +M + P+A ++D K+
Sbjct: 682 KELLDEMSVKGLHPNAVTYCTIIDGYCKS 710
Score = 122 bits (305), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 87/329 (26%), Positives = 152/329 (46%), Gaps = 16/329 (4%)
Query: 1 MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
+G + + +++ TP+ + + L+ G C I +A L ++ V G P+ T
Sbjct: 640 LGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVT 699
Query: 61 YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
Y T+++G C++ A LF+EM G+V P++ YTT++DG C+ V++A
Sbjct: 700 YCTIIDGYCKSGDLAEAFRLFDEMKLK----GLV--PDSFVYTTLVDGCCRLNDVERAIT 753
Query: 121 LLLQMKDKNIKPNVVTYTSVIRG-FCYAKDWNEAK---RLFIEMMDQGVQPNVVTFNVIM 176
+ K K + + ++I F + K + + RL D+ +PN VT+N+++
Sbjct: 754 IFGTNK-KGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMI 812
Query: 177 DELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCK 236
D LCK G ++ A L M + P TY +LL+G+ GR +F + G +
Sbjct: 813 DYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIE 872
Query: 237 HTVFSYSILINGYCKNKEIEGALSLYSEMLSK-----GIKPDVVIHNTLFVGLFEIHQVE 291
YS++IN + K AL L +M +K G K + L G ++ ++E
Sbjct: 873 PDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEME 932
Query: 292 RAFKLFDEMQRNGVAADTWTYRTFIDGLC 320
A K+ + M R D+ T I+ C
Sbjct: 933 VAEKVMENMVRLQYIPDSATVIELINESC 961
Score = 57.0 bits (136), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/234 (22%), Positives = 92/234 (39%), Gaps = 77/234 (32%)
Query: 291 ERAFKLFDEM-QRNGVAADTWT------------------YRTFIDGLCKNGYIVEAVEL 331
E+A + + M +RN A+ W+ + DG GYI EAV +
Sbjct: 114 EKALSVVERMIERNWPVAEVWSSIVRCSQEFVGKSDDGVLFGILFDGYIAKGYIEEAVFV 173
Query: 332 FHTL-------RILKCE----------------------------FDIRAYNSLIDGLCK 356
F + R+ +C+ FD++ Y+ LI C+
Sbjct: 174 FSSSMGLELVPRLSRCKVLLDALLRWNRLDLFWDVYKGMVERNVVFDVKTYHMLIIAHCR 233
Query: 357 SGRLEI---------------------ALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQM 395
+G +++ AL+L S+ C LVP TY ++I GLC ++
Sbjct: 234 AGNVQLGKDVLFKTEKEFRTATLNVDGALKLKESMICKGLVPLKYTYDVLIDGLCKIKRL 293
Query: 396 DKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKM--KEINVMP 447
+ A+ L ++M+ V + T+ +LI G ++ L+H+M IN+ P
Sbjct: 294 EDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMVSHGINIKP 347
>sp|Q0WKZ3|PP105_ARATH Pentatricopeptide repeat-containing protein At1g64580
OS=Arabidopsis thaliana GN=At1g64580 PE=2 SV=1
Length = 523
Score = 245 bits (626), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 145/403 (35%), Positives = 223/403 (55%), Gaps = 6/403 (1%)
Query: 20 TPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALN 79
+ D +FT LI C SR+ A AL K+ G P + T +L+NG C+ + A++
Sbjct: 111 SHDLYSFTILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVS 170
Query: 80 LFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTS 139
L + M FG V PN V Y T+I+GLCK ++ A E+ M+ K I+ + VTY +
Sbjct: 171 LVDSMDG----FGFV--PNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNT 224
Query: 140 VIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHG 199
+I G + W +A RL +M+ + + PNV+ F ++D K G + EA L MI+
Sbjct: 225 LISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRS 284
Query: 200 VRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGAL 259
V P+ FTYN+L++GFC+ G + AK +F M S GC V +Y+ LI G+CK+K +E +
Sbjct: 285 VVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGM 344
Query: 260 SLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGL 319
L+ EM +G+ D +NTL G + ++ A K+F+ M GV+ D TY +D L
Sbjct: 345 KLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCL 404
Query: 320 CKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNV 379
C NG I +A+ + L+ + + DI YN +I GLC++ +L+ A LFRSL + P+
Sbjct: 405 CNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDA 464
Query: 380 VTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIR 422
+ Y MI GLC G +A L M+E+ +P+ +D +R
Sbjct: 465 IAYITMISGLCRKGLQREADKLCRRMKEDGFMPSERIYDETLR 507
Score = 218 bits (556), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 137/445 (30%), Positives = 227/445 (51%), Gaps = 6/445 (1%)
Query: 7 GFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVN 66
F + +L+S P V FT ++ + ++ L+ K+ G D++++T L++
Sbjct: 63 AFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTILIH 122
Query: 67 GLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMK 126
CR S +AL L +M + G P+ VT ++++G C+ +A L+ M
Sbjct: 123 CFCRCSRLSLALALLGKMM----KLGF--RPSIVTLGSLLNGFCQGNRFQEAVSLVDSMD 176
Query: 127 DKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMD 186
PNVV Y +VI G C +D N A +F M +G++ + VT+N ++ L +G+
Sbjct: 177 GFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWT 236
Query: 187 EASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILI 246
+A+RLL M++ + P+ + L+D F G + A+ L+ M VF+Y+ LI
Sbjct: 237 DAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLI 296
Query: 247 NGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVA 306
NG+C + + A ++ M+SKG PDVV +NTL G + +VE KLF EM G+
Sbjct: 297 NGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLV 356
Query: 307 ADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALEL 366
D +TY T I G C+ G + A ++F+ + DI YN L+D LC +G++E AL +
Sbjct: 357 GDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVM 416
Query: 367 FRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIR 426
L + +++TY+I+I GLC ++ +A LF + V P+ I + +I G R
Sbjct: 417 VEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCR 476
Query: 427 INEPSKVIELLHKMKEINVMPDASI 451
+ +L +MKE MP I
Sbjct: 477 KGLQREADKLCRRMKEDGFMPSERI 501
Score = 218 bits (555), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 126/371 (33%), Positives = 197/371 (53%), Gaps = 6/371 (1%)
Query: 12 GRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRT 71
G+++K F P VT SL+ G C +R EA +L + FG P+V Y T++NGLC+
Sbjct: 138 GKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKN 197
Query: 72 SHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIK 131
AL +F M G+ + VTY T+I GL G A LL M + I
Sbjct: 198 RDLNNALEVFYCMEKK----GI--RADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKID 251
Query: 132 PNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRL 191
PNV+ +T++I F + EA+ L+ EM+ + V PNV T+N +++ C +G + +A +
Sbjct: 252 PNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYM 311
Query: 192 LDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCK 251
DLM+ G PD TYNTL+ GFC + RV +LF M G F+Y+ LI+GYC+
Sbjct: 312 FDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQ 371
Query: 252 NKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWT 311
++ A +++ M+ G+ PD+V +N L L ++E+A + +++Q++ + D T
Sbjct: 372 AGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIIT 431
Query: 312 YRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLP 371
Y I GLC+ + EA LF +L + D AY ++I GLC+ G A +L R +
Sbjct: 432 YNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMK 491
Query: 372 CGVLVPNVVTY 382
+P+ Y
Sbjct: 492 EDGFMPSERIY 502
Score = 152 bits (385), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 98/347 (28%), Positives = 171/347 (49%)
Query: 116 DKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVI 175
D A L +M P++V +T V+ ++ L+ +M + G+ ++ +F ++
Sbjct: 61 DDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTIL 120
Query: 176 MDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGC 235
+ C+ ++ A LL M++ G RP T +LL+GFC R A L SM+ G
Sbjct: 121 IHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGF 180
Query: 236 KHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFK 295
V Y+ +ING CKN+++ AL ++ M KGI+ D V +NTL GL + A +
Sbjct: 181 VPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAAR 240
Query: 296 LFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLC 355
L +M + + + + ID K G ++EA L+ + ++ YNSLI+G C
Sbjct: 241 LLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFC 300
Query: 356 KSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVI 415
G L A +F + P+VVTY+ +I G C +++ LF +M +V +
Sbjct: 301 IHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAF 360
Query: 416 TFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKN 462
T++ LI G+ + + + ++ ++M + V PD +I++D L N
Sbjct: 361 TYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNN 407
Score = 149 bits (375), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 85/277 (30%), Positives = 144/277 (51%), Gaps = 6/277 (2%)
Query: 2 GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
GR + +L ++K P+ + FT+LI E ++EA L+ ++ P+VFTY
Sbjct: 233 GRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTY 292
Query: 62 TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
+L+NG C A +F+ M + C P+ VTY T+I G CK V+ +L
Sbjct: 293 NSLINGFCIHGCLGDAKYMFDLMVSKG------CFPDVVTYNTLITGFCKSKRVEDGMKL 346
Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
+M + + + TY ++I G+C A N A+++F M+D GV P++VT+N+++D LC
Sbjct: 347 FCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCN 406
Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
NGK+++A +++ + + + D TYN ++ G C T ++ A LF S+ G K +
Sbjct: 407 NGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIA 466
Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHN 278
Y +I+G C+ A L M G P I++
Sbjct: 467 YITMISGLCRKGLQREADKLCRRMKEDGFMPSERIYD 503
Score = 137 bits (345), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 90/313 (28%), Positives = 155/313 (49%)
Query: 137 YTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 196
Y +R + +++A LF EM+ P++V F ++ + K K D L M
Sbjct: 47 YRERLRNELHCIKFDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKME 106
Query: 197 QHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIE 256
G+ D +++ L+ FC R++ A L M +G + ++ + L+NG+C+ +
Sbjct: 107 NLGISHDLYSFTILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQ 166
Query: 257 GALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFI 316
A+SL M G P+VVI+NT+ GL + + A ++F M++ G+ AD TY T I
Sbjct: 167 EAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLI 226
Query: 317 DGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLV 376
GL +G +A L + K + ++ + +LID K G L A L++ + +V
Sbjct: 227 SGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVV 286
Query: 377 PNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIEL 436
PNV TY+ +I G C G + A+ +F M P+V+T++ LI GF + ++L
Sbjct: 287 PNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKL 346
Query: 437 LHKMKEINVMPDA 449
+M ++ DA
Sbjct: 347 FCEMTYQGLVGDA 359
Score = 80.9 bits (198), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 99/208 (47%)
Query: 254 EIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYR 313
+ + A SL+ EML P +V + + ++++ + L+ +M+ G++ D +++
Sbjct: 59 KFDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFT 118
Query: 314 TFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCG 373
I C+ + A+ L + L I SL++G C+ R + A+ L S+
Sbjct: 119 ILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGF 178
Query: 374 VLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKV 433
VPNVV Y+ +I GLC + ++ A ++F ME+ + + +T++ LI G +
Sbjct: 179 GFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDA 238
Query: 434 IELLHKMKEINVMPDASIVSIVVDLLAK 461
LL M + + P+ + ++D K
Sbjct: 239 ARLLRDMVKRKIDPNVIFFTALIDTFVK 266
Score = 70.1 bits (170), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 70/141 (49%), Gaps = 6/141 (4%)
Query: 2 GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
G+++ V R++ +PD VT+ L+ LC +I +A + L+ + D+ TY
Sbjct: 373 GKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITY 432
Query: 62 TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
++ GLCRT A LF + GV +P+ + Y T+I GLC++G +A +L
Sbjct: 433 NIIIQGLCRTDKLKEAWCLFRSLTRK----GV--KPDAIAYITMISGLCRKGLQREADKL 486
Query: 122 LLQMKDKNIKPNVVTYTSVIR 142
+MK+ P+ Y +R
Sbjct: 487 CRRMKEDGFMPSERIYDETLR 507
Score = 37.7 bits (86), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 27/125 (21%), Positives = 59/125 (47%)
Query: 354 LCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPN 413
+ K + +I + L+ + + ++ +++I+I C ++ A L M + P+
Sbjct: 89 IAKMNKFDIVIYLYHKMENLGISHDLYSFTILIHCFCRCSRLSLALALLGKMMKLGFRPS 148
Query: 414 VITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEISLNSLPSFT 473
++T L+ GF + N + + L+ M +P+ I + V++ L KN N+L F
Sbjct: 149 IVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFY 208
Query: 474 VHEQQ 478
E++
Sbjct: 209 CMEKK 213
>sp|Q9SZ52|PP344_ARATH Pentatricopeptide repeat-containing protein At4g31850,
chloroplastic OS=Arabidopsis thaliana GN=PGR3 PE=1 SV=1
Length = 1112
Score = 243 bits (621), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 147/453 (32%), Positives = 240/453 (52%), Gaps = 6/453 (1%)
Query: 10 VLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLC 69
V R++ F P T++SL+ GL I L ++ G +P+V+T+T + L
Sbjct: 210 VYRRMILEGFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTICIRVLG 269
Query: 70 RTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKN 129
R A + + M + C P+ VTYT +ID LC +D AKE+ +MK
Sbjct: 270 RAGKINEAYEILKRMDDEG------CGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGR 323
Query: 130 IKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEAS 189
KP+ VTY +++ F +D + K+ + EM G P+VVTF +++D LCK G EA
Sbjct: 324 HKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAF 383
Query: 190 RLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGY 249
LD+M G+ P+ TYNTL+ G R++ A ELF +MES+G K T ++Y + I+ Y
Sbjct: 384 DTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYY 443
Query: 250 CKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADT 309
K+ + AL + +M +KGI P++V N L + + A ++F ++ G+ D+
Sbjct: 444 GKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDS 503
Query: 310 WTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRS 369
TY + K G I EA++L + CE D+ NSLI+ L K+ R++ A ++F
Sbjct: 504 VTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMR 563
Query: 370 LPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINE 429
+ L P VVTY+ ++ GL +G++ +A +LF M + PN ITF+ L + +E
Sbjct: 564 MKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDE 623
Query: 430 PSKVIELLHKMKEINVMPDASIVSIVVDLLAKN 462
+ +++L KM ++ +PD + ++ L KN
Sbjct: 624 VTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKN 656
Score = 211 bits (536), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 137/437 (31%), Positives = 226/437 (51%), Gaps = 12/437 (2%)
Query: 2 GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
G+++ + +L R+ PD VT+T LI LC ++ A +F K++ +PD TY
Sbjct: 272 GKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTY 331
Query: 62 TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
TL++ + EM +G P+ VT+T ++D LCK G +A +
Sbjct: 332 ITLLDRFSDNRDLDSVKQFWSEMEK-DGHV-----PDVVTFTILVDALCKAGNFGEAFDT 385
Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
L M+D+ I PN+ TY ++I G ++A LF M GV+P T+ V +D K
Sbjct: 386 LDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGK 445
Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
+G A + M G+ P+ N L GR AK++F ++ +G +
Sbjct: 446 SGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVT 505
Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
Y++++ Y K EI+ A+ L SEM+ G +PDV++ N+L L++ +V+ A+K+F M+
Sbjct: 506 YNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMK 565
Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
+ TY T + GL KNG I EA+ELF + C + +N+L D LCK+ +
Sbjct: 566 EMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVT 625
Query: 362 IALE-LFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDML 420
+AL+ LF+ + G VP+V TY+ +I GL +GQ+ +A F M++ V P+ +T L
Sbjct: 626 LALKMLFKMMDMGC-VPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKK-LVYPDFVTLCTL 683
Query: 421 IRGFIR---INEPSKVI 434
+ G ++ I + K+I
Sbjct: 684 LPGVVKASLIEDAYKII 700
Score = 195 bits (496), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 138/497 (27%), Positives = 230/497 (46%), Gaps = 41/497 (8%)
Query: 2 GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
G++ V + K D T+ ++ K L + + +A K+R FG + ++Y
Sbjct: 132 GKLEEMAYVFDLMQKRIIKRDTNTYLTIFKSLSVKGGLKQAPYALRKMREFGFVLNAYSY 191
Query: 62 TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
L++ L ++ A+ ++ M P+ TY++++ GL K +D L
Sbjct: 192 NGLIHLLLKSRFCTEAMEVYRRMILEG------FRPSLQTYSSLMVGLGKRRDIDSVMGL 245
Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
L +M+ +KPNV T+T IR A NEA + M D+G P+VVT+ V++D LC
Sbjct: 246 LKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCT 305
Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
K+D A + + M +PD TY TLLD F ++ K+ + ME G V +
Sbjct: 306 ARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVT 365
Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
++IL++ CK A M +GI P++ +NTL GL +H+++ A +LF M+
Sbjct: 366 FTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNME 425
Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
GV +TY FID K+G V A+E F ++ +I A N+ + L K+GR
Sbjct: 426 SLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDR 485
Query: 362 IALELFRSLPCGVLVPNVVTYSIM-----------------------------------I 386
A ++F L LVP+ VTY++M I
Sbjct: 486 EAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLI 545
Query: 387 GGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVM 446
L ++D+A +F+ M+E + P V+T++ L+ G + + + IEL M +
Sbjct: 546 NTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCP 605
Query: 447 PDASIVSIVVDLLAKNE 463
P+ + + D L KN+
Sbjct: 606 PNTITFNTLFDCLCKND 622
Score = 187 bits (474), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 113/338 (33%), Positives = 174/338 (51%), Gaps = 14/338 (4%)
Query: 6 HGFVVLGRILKSCFT------PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVF 59
H V R L FT P T+ LI GL I A +F +++ GC PDV
Sbjct: 762 HNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVA 821
Query: 60 TYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAK 119
TY L++ ++ L++EM+ CE NT+T+ +I GL K G VD A
Sbjct: 822 TYNFLLDAYGKSGKIDELFELYKEMSTHE------CEANTITHNIVISGLVKAGNVDDAL 875
Query: 120 ELLLQ-MKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDE 178
+L M D++ P TY +I G + EAK+LF M+D G +PN +N++++
Sbjct: 876 DLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILING 935
Query: 179 LCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHT 238
K G+ D A L M++ GVRPD TY+ L+D C+ GRV+ F ++ G
Sbjct: 936 FGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPD 995
Query: 239 VFSYSILINGYCKNKEIEGALSLYSEM-LSKGIKPDVVIHNTLFVGLFEIHQVERAFKLF 297
V Y+++ING K+ +E AL L++EM S+GI PD+ +N+L + L VE A K++
Sbjct: 996 VVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIY 1055
Query: 298 DEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTL 335
+E+QR G+ + +T+ I G +G A ++ T+
Sbjct: 1056 NEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTM 1093
Score = 185 bits (469), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 127/463 (27%), Positives = 217/463 (46%), Gaps = 11/463 (2%)
Query: 1 MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
+G + +L ++++ PD + SLI L R+ EA +F +++ +P V T
Sbjct: 516 VGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVT 575
Query: 61 YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
Y TL+ GL + A+ LFE M C PNT+T+ T+ D LCK V A +
Sbjct: 576 YNTLLAGLGKNGKIQEAIELFEGMVQKG------CPPNTITFNTLFDCLCKNDEVTLALK 629
Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
+L +M D P+V TY ++I G EA F M + V P+ VT ++ +
Sbjct: 630 MLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEA-MCFFHQMKKLVYPDFVTLCTLLPGVV 688
Query: 181 KNGKMDEASRLL-DLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMG-CKHT 238
K +++A +++ + + +P + L+ +++A + + G C+
Sbjct: 689 KASLIEDAYKIITNFLYNCADQPANLFWEDLIGSILAEAGIDNAVSFSERLVANGICRDG 748
Query: 239 VFSYSILINGYCKNKEIEGALSLYSEMLSK-GIKPDVVIHNTLFVGLFEIHQVERAFKLF 297
+I CK+ + GA +L+ + G++P + +N L GL E +E A +F
Sbjct: 749 DSILVPIIRYSCKHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVF 808
Query: 298 DEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKS 357
+++ G D TY +D K+G I E EL+ + +CE + +N +I GL K+
Sbjct: 809 LQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKA 868
Query: 358 GRLEIALELFRSLPCGV-LVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVIT 416
G ++ AL+L+ L P TY +I GL G++ +A+ LF M + PN
Sbjct: 869 GNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAI 928
Query: 417 FDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLL 459
+++LI GF + E L +M + V PD S++VD L
Sbjct: 929 YNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCL 971
Score = 184 bits (466), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 138/505 (27%), Positives = 238/505 (47%), Gaps = 56/505 (11%)
Query: 3 RVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYT 62
RV + + R+ + P VT+ +L+ GL +I EA LF + GC P+ T+
Sbjct: 553 RVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFN 612
Query: 63 TLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELL 122
TL + LC+ +AL + +M + + C P+ TY TII GL K G V +A
Sbjct: 613 TLFDCLCKNDEVTLALKMLFKMMD------MGCVPDVFTYNTIIFGLVKNGQVKEAMCFF 666
Query: 123 LQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKR---------------LFIE------MM 161
QMK K + P+ VT +++ G A +A + LF E +
Sbjct: 667 HQMK-KLVYPDFVTLCTLLPGVVKASLIEDAYKIITNFLYNCADQPANLFWEDLIGSILA 725
Query: 162 DQGVQPNVVTFN-----------------VIMDELCKNGKMDEASRLLDLMIQH-GVRPD 203
+ G+ N V+F+ I+ CK+ + A L + + GV+P
Sbjct: 726 EAGID-NAVSFSERLVANGICRDGDSILVPIIRYSCKHNNVSGARTLFEKFTKDLGVQPK 784
Query: 204 AFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYS 263
TYN L+ G + A+++F+ ++S GC V +Y+ L++ Y K+ +I+ LY
Sbjct: 785 LPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYK 844
Query: 264 EMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLF-DEMQRNGVAADTWTYRTFIDGLCKN 322
EM + + + + HN + GL + V+ A L+ D M + TY IDGL K+
Sbjct: 845 EMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKS 904
Query: 323 GYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTY 382
G + EA +LF + C + YN LI+G K+G + A LF+ + + P++ TY
Sbjct: 905 GRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTY 964
Query: 383 SIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKE 442
S+++ LC G++D+ F +++E+ + P+V+ ++++I G + + + + L ++MK
Sbjct: 965 SVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMK- 1023
Query: 443 INVMPDASIVSIVVDLLAKNEISLN 467
+ I DL N + LN
Sbjct: 1024 -------TSRGITPDLYTYNSLILN 1041
Score = 179 bits (455), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 131/473 (27%), Positives = 220/473 (46%), Gaps = 41/473 (8%)
Query: 25 TFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEEM 84
T +++ L + ++ E A +F ++ + D TY T+ L A +M
Sbjct: 120 TCNYMLEALRVDGKLEEMAYVFDLMQKRIIKRDTNTYLTIFKSLSVKGGLKQAPYALRKM 179
Query: 85 ANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGF 144
EFG V N +Y +I L K F +A E+ +M + +P++ TY+S++ G
Sbjct: 180 R----EFGFVL--NAYSYNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGL 233
Query: 145 CYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDA 204
+D + L EM G++PNV TF + + L + GK++EA +L M G PD
Sbjct: 234 GKRRDIDSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDV 293
Query: 205 FTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSE 264
TY L+D C +++ AKE+F M++ K +Y L++ + N++++ +SE
Sbjct: 294 VTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSE 353
Query: 265 MLSKGIKPDVV-----------------------------------IHNTLFVGLFEIHQ 289
M G PDVV +NTL GL +H+
Sbjct: 354 MEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHR 413
Query: 290 VERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNS 349
++ A +LF M+ GV +TY FID K+G V A+E F ++ +I A N+
Sbjct: 414 LDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNA 473
Query: 350 LIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENA 409
+ L K+GR A ++F L LVP+ VTY++M+ G++D+A L +M EN
Sbjct: 474 SLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENG 533
Query: 410 VVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKN 462
P+VI + LI + + + ++ +MKE+ + P + ++ L KN
Sbjct: 534 CEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKN 586
Score = 175 bits (443), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 125/446 (28%), Positives = 212/446 (47%), Gaps = 46/446 (10%)
Query: 15 LKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGC--EPDVFTYTTLV------- 65
+K PD VT +L+ G+ S I +A + T ++ C +P + L+
Sbjct: 669 MKKLVYPDFVTLCTLLPGVVKASLIEDAYKIITNF-LYNCADQPANLFWEDLIGSILAEA 727
Query: 66 --------------NGLCRTSHTIV---------------ALNLFEEMANGNGEFGVVCE 96
NG+CR +I+ A LFE+ + GV +
Sbjct: 728 GIDNAVSFSERLVANGICRDGDSILVPIIRYSCKHNNVSGARTLFEKFTK---DLGV--Q 782
Query: 97 PNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRL 156
P TY +I GL + ++ A+++ LQ+K P+V TY ++ + + +E L
Sbjct: 783 PKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFEL 842
Query: 157 FIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLL-DLMIQHGVRPDAFTYNTLLDGFC 215
+ EM + N +T N+++ L K G +D+A L DLM P A TY L+DG
Sbjct: 843 YKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLS 902
Query: 216 LTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVV 275
+GR+ AK+LF M GC+ Y+ILING+ K E + A +L+ M+ +G++PD+
Sbjct: 903 KSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLK 962
Query: 276 IHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTL 335
++ L L + +V+ F E++ +G+ D Y I+GL K+ + EA+ LF+ +
Sbjct: 963 TYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEM 1022
Query: 336 RILK-CEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQ 394
+ + D+ YNSLI L +G +E A +++ + L PNV T++ +I G G+
Sbjct: 1023 KTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGK 1082
Query: 395 MDKARDLFLDMEENAVVPNVITFDML 420
+ A ++ M PN T++ L
Sbjct: 1083 PEHAYAVYQTMVTGGFSPNTGTYEQL 1108
Score = 172 bits (436), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 129/454 (28%), Positives = 207/454 (45%), Gaps = 35/454 (7%)
Query: 21 PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTS-----HTI 75
PD T+ ++I GL ++ EA F +++ PD T TL+ G+ + S + I
Sbjct: 641 PDVFTYNTIIFGLVKNGQVKEAMCFFHQMKKL-VYPDFVTLCTLLPGVVKASLIEDAYKI 699
Query: 76 VA----------LNLFEEMANGN--GEFGV--------------VCEPNTVTYTTIIDGL 109
+ NLF E G+ E G+ +C II
Sbjct: 700 ITNFLYNCADQPANLFWEDLIGSILAEAGIDNAVSFSERLVANGICRDGDSILVPIIRYS 759
Query: 110 CKEGFVDKAKELLLQM-KDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPN 168
CK V A+ L + KD ++P + TY +I G A A+ +F+++ G P+
Sbjct: 760 CKHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPD 819
Query: 169 VVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFV 228
V T+N ++D K+GK+DE L M H + T+N ++ G G V+ A +L+
Sbjct: 820 VATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYY 879
Query: 229 S-MESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEI 287
M T +Y LI+G K+ + A L+ ML G +P+ I+N L G +
Sbjct: 880 DLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKA 939
Query: 288 HQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAY 347
+ + A LF M + GV D TY +D LC G + E + F L+ D+ Y
Sbjct: 940 GEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCY 999
Query: 348 NSLIDGLCKSGRLEIALELFRSLPCGV-LVPNVVTYSIMIGGLCNDGQMDKARDLFLDME 406
N +I+GL KS RLE AL LF + + P++ TY+ +I L G +++A ++ +++
Sbjct: 1000 NLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQ 1059
Query: 407 ENAVVPNVITFDMLIRGFIRINEPSKVIELLHKM 440
+ PNV TF+ LIRG+ +P + M
Sbjct: 1060 RAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTM 1093
Score = 137 bits (344), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 96/392 (24%), Positives = 176/392 (44%), Gaps = 36/392 (9%)
Query: 117 KAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQ-GVQPNVVTFNVI 175
K+ + M K+ KP++ + V RG D + + F + + T N +
Sbjct: 65 KSSDFSGSMIRKSSKPDLSSSEEVTRGLKSFPDTDSSFSYFKSVAGNLNLVHTTETCNYM 124
Query: 176 MDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGC 235
++ L +GK++E + + DLM + ++ D TY T+ + G + A M G
Sbjct: 125 LEALRVDGKLEEMAYVFDLMQKRIIKRDTNTYLTIFKSLSVKGGLKQAPYALRKMREFGF 184
Query: 236 KHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFK 295
+SY+ LI+ K++ A+ +Y M+ +G +P + +++L VGL + ++
Sbjct: 185 VLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDIDSVMG 244
Query: 296 LFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLC 355
L EM+ G+ + +T+ I L + G I EA E+ + C D+ Y LID LC
Sbjct: 245 LLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALC 304
Query: 356 KSGRLEIALELFRSLPCGVL-----------------------------------VPNVV 380
+ +L+ A E+F + G VP+VV
Sbjct: 305 TARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVV 364
Query: 381 TYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKM 440
T++I++ LC G +A D M + ++PN+ T++ LI G +R++ +EL M
Sbjct: 365 TFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNM 424
Query: 441 KEINVMPDASIVSIVVDLLAKNEISLNSLPSF 472
+ + V P A + +D K+ S+++L +F
Sbjct: 425 ESLGVKPTAYTYIVFIDYYGKSGDSVSALETF 456
Score = 130 bits (328), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 107/479 (22%), Positives = 210/479 (43%), Gaps = 75/479 (15%)
Query: 55 EPDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGF 114
+PD+ + + GL T + + F+ +A G +V T Y +++ L +G
Sbjct: 79 KPDLSSSEEVTRGLKSFPDTDSSFSYFKSVA---GNLNLVHTTETCNY--MLEALRVDGK 133
Query: 115 VDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNV 174
+++ + M+ + IK + TY ++ + +A +M + G N ++N
Sbjct: 134 LEEMAYVFDLMQKRIIKRDTNTYLTIFKSLSVKGGLKQAPYALRKMREFGFVLNAYSYNG 193
Query: 175 IMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGF-------------------- 214
++ L K+ EA + MI G RP TY++L+ G
Sbjct: 194 LIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEMETLG 253
Query: 215 ----------CL-----TGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGAL 259
C+ G++N A E+ M+ GC V +Y++LI+ C ++++ A
Sbjct: 254 LKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAK 313
Query: 260 SLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGL 319
++ +M + KPD V + TL + ++ + + EM+++G D T+ +D L
Sbjct: 314 EVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDAL 373
Query: 320 CKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPC-GV---- 374
CK G EA + +R ++ YN+LI GL + RL+ ALELF ++ GV
Sbjct: 374 CKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTA 433
Query: 375 ------------------------------LVPNVVTYSIMIGGLCNDGQMDKARDLFLD 404
+ PN+V + + L G+ +A+ +F
Sbjct: 434 YTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYG 493
Query: 405 MEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNE 463
+++ +VP+ +T++M+++ + ++ E + I+LL +M E PD +V+ +++ L K +
Sbjct: 494 LKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKAD 552
Score = 127 bits (318), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 72/230 (31%), Positives = 120/230 (52%), Gaps = 7/230 (3%)
Query: 19 FTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVAL 78
F+P A T+ LI GL R+ EA LF + +GC P+ Y L+NG + A
Sbjct: 887 FSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAAC 946
Query: 79 NLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYT 138
LF+ M + GV P+ TY+ ++D LC G VD+ ++K+ + P+VV Y
Sbjct: 947 ALFKRMV----KEGV--RPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYN 1000
Query: 139 SVIRGFCYAKDWNEAKRLFIEM-MDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQ 197
+I G + EA LF EM +G+ P++ T+N ++ L G ++EA ++ + + +
Sbjct: 1001 LIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQR 1060
Query: 198 HGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILIN 247
G+ P+ FT+N L+ G+ L+G+ HA ++ +M + G +Y L N
Sbjct: 1061 AGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPNTGTYEQLPN 1110
Score = 85.5 bits (210), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 83/171 (48%), Gaps = 5/171 (2%)
Query: 2 GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
G + R++K PD T++ L+ LC R+ E F +L+ G PDV Y
Sbjct: 940 GEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCY 999
Query: 62 TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
++NGL ++ AL LF EM G P+ TY ++I L G V++A ++
Sbjct: 1000 NLIINGLGKSHRLEEALVLFNEMKTSRG-----ITPDLYTYNSLILNLGIAGMVEEAGKI 1054
Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTF 172
+++ ++PNV T+ ++IRG+ + A ++ M+ G PN T+
Sbjct: 1055 YNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPNTGTY 1105
Score = 56.2 bits (134), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 58/138 (42%), Gaps = 7/138 (5%)
Query: 1 MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVF-GCEPDVF 59
+GRV G + +S PD V + +I GL R+ EA LF +++ G PD++
Sbjct: 974 VGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLY 1033
Query: 60 TYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAK 119
TY +L+ L A ++ E+ EPN T+ +I G G + A
Sbjct: 1034 TYNSLILNLGIAGMVEEAGKIYNEIQRAG------LEPNVFTFNALIRGYSLSGKPEHAY 1087
Query: 120 ELLLQMKDKNIKPNVVTY 137
+ M PN TY
Sbjct: 1088 AVYQTMVTGGFSPNTGTY 1105
>sp|Q9SR00|PP213_ARATH Pentatricopeptide repeat-containing protein At3g04760,
chloroplastic OS=Arabidopsis thaliana GN=At3g04760 PE=2
SV=1
Length = 602
Score = 243 bits (621), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 139/430 (32%), Positives = 228/430 (53%), Gaps = 11/430 (2%)
Query: 1 MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
M R+ VL R+ F+PD VT+ +I LC+ ++ A + +L C+P V T
Sbjct: 171 MNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVIT 230
Query: 61 YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
YT L+ AL L +EM + +P+ TY TII G+CKEG VD+A E
Sbjct: 231 YTILIEATMLEGGVDEALKLMDEMLSRG------LKPDMFTYNTIIRGMCKEGMVDRAFE 284
Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
++ ++ K +P+V++Y ++R W E ++L +M + PNVVT+++++ LC
Sbjct: 285 MVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLC 344
Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
++GK++EA LL LM + G+ PDA++Y+ L+ FC GR++ A E +M S GC +
Sbjct: 345 RDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIV 404
Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
+Y+ ++ CKN + + AL ++ ++ G P+ +NT+F L+ RA + EM
Sbjct: 405 NYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEM 464
Query: 301 QRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEF--DIRAYNSLIDGLCKSG 358
NG+ D TY + I LC+ G + EA EL +R CEF + YN ++ G CK+
Sbjct: 465 MSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMR--SCEFHPSVVTYNIVLLGFCKAH 522
Query: 359 RLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFD 418
R+E A+ + S+ PN TY+++I G+ G +A +L D+ + +F
Sbjct: 523 RIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDLVRIDAISEY-SFK 581
Query: 419 MLIRGFIRIN 428
L R F +N
Sbjct: 582 RLHRTFPLLN 591
Score = 229 bits (584), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 133/448 (29%), Positives = 229/448 (51%), Gaps = 7/448 (1%)
Query: 10 VLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLC 69
+L +++ + PD + T LIKG I +A + L FG +PDVF Y L+NG C
Sbjct: 111 LLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFG-QPDVFAYNALINGFC 169
Query: 70 RTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKN 129
+ + A + + M + + P+TVTY +I LC G +D A ++L Q+ N
Sbjct: 170 KMNRIDDATRVLDRMRSKD------FSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDN 223
Query: 130 IKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEAS 189
+P V+TYT +I +EA +L EM+ +G++P++ T+N I+ +CK G +D A
Sbjct: 224 CQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAF 283
Query: 190 RLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGY 249
++ + G PD +YN LL G+ ++L M S C V +YSILI
Sbjct: 284 EMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTL 343
Query: 250 CKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADT 309
C++ +IE A++L M KG+ PD ++ L +++ A + + M +G D
Sbjct: 344 CRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDI 403
Query: 310 WTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRS 369
Y T + LCKNG +A+E+F L + C + +YN++ L SG AL +
Sbjct: 404 VNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILE 463
Query: 370 LPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINE 429
+ + P+ +TY+ MI LC +G +D+A +L +DM P+V+T+++++ GF + +
Sbjct: 464 MMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHR 523
Query: 430 PSKVIELLHKMKEINVMPDASIVSIVVD 457
I +L M P+ + +++++
Sbjct: 524 IEDAINVLESMVGNGCRPNETTYTVLIE 551
Score = 179 bits (453), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 103/393 (26%), Positives = 194/393 (49%), Gaps = 7/393 (1%)
Query: 69 CRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDK 128
CR+ + I +L+L E M P+ + T +I G + KA ++ ++ +K
Sbjct: 100 CRSGNYIESLHLLETMVRKG------YNPDVILCTKLIKGFFTLRNIPKAVRVM-EILEK 152
Query: 129 NIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEA 188
+P+V Y ++I GFC ++A R+ M + P+ VT+N+++ LC GK+D A
Sbjct: 153 FGQPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLA 212
Query: 189 SRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILING 248
++L+ ++ +P TY L++ L G V+ A +L M S G K +F+Y+ +I G
Sbjct: 213 LKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRG 272
Query: 249 YCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAAD 308
CK ++ A + + KG +PDV+ +N L L + E KL +M +
Sbjct: 273 MCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPN 332
Query: 309 TWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFR 368
TY I LC++G I EA+ L ++ D +Y+ LI C+ GRL++A+E
Sbjct: 333 VVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLE 392
Query: 369 SLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRIN 428
++ +P++V Y+ ++ LC +G+ D+A ++F + E PN +++ +
Sbjct: 393 TMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSG 452
Query: 429 EPSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
+ + + ++ +M + PD + ++ L +
Sbjct: 453 DKIRALHMILEMMSNGIDPDEITYNSMISCLCR 485
Score = 167 bits (424), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 97/318 (30%), Positives = 161/318 (50%), Gaps = 1/318 (0%)
Query: 145 CYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDA 204
C + ++ E+ L M+ +G P+V+ ++ + +A R+++++ + G +PD
Sbjct: 100 CRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFG-QPDV 158
Query: 205 FTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSE 264
F YN L++GFC R++ A + M S +Y+I+I C +++ AL + ++
Sbjct: 159 FAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQ 218
Query: 265 MLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGY 324
+LS +P V+ + L V+ A KL DEM G+ D +TY T I G+CK G
Sbjct: 219 LLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGM 278
Query: 325 IVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSI 384
+ A E+ L + CE D+ +YN L+ L G+ E +L + PNVVTYSI
Sbjct: 279 VDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSI 338
Query: 385 MIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEIN 444
+I LC DG++++A +L M+E + P+ ++D LI F R IE L M
Sbjct: 339 LITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDG 398
Query: 445 VMPDASIVSIVVDLLAKN 462
+PD + V+ L KN
Sbjct: 399 CLPDIVNYNTVLATLCKN 416
>sp|P0C894|PP143_ARATH Putative pentatricopeptide repeat-containing protein At2g02150
OS=Arabidopsis thaliana GN=At2g02150 PE=3 SV=1
Length = 761
Score = 241 bits (614), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 138/447 (30%), Positives = 235/447 (52%), Gaps = 8/447 (1%)
Query: 21 PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
P T+ +I +C E + A LF +++ G PD TY ++++G + +
Sbjct: 260 PTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCF 319
Query: 81 FEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSV 140
FEEM + + CEP+ +TY +I+ CK G + E +MK +KPNVV+Y+++
Sbjct: 320 FEEMKD------MCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTL 373
Query: 141 IRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGV 200
+ FC +A + +++M G+ PN T+ ++D CK G + +A RL + M+Q GV
Sbjct: 374 VDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGV 433
Query: 201 RPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALS 260
+ TY L+DG C R+ A+ELF M++ G + SY+ LI+G+ K K ++ AL
Sbjct: 434 EWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALE 493
Query: 261 LYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLC 320
L +E+ +GIKPD++++ T GL + ++E A + +EM+ G+ A++ Y T +D
Sbjct: 494 LLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYF 553
Query: 321 KNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGV-LVPNV 379
K+G E + L ++ L E + + LIDGLCK+ + A++ F + L N
Sbjct: 554 KSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANA 613
Query: 380 VTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHK 439
++ MI GLC D Q++ A LF M + +VP+ + L+ G + + + L K
Sbjct: 614 AIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDK 673
Query: 440 MKEINVMPD-ASIVSIVVDLLAKNEIS 465
M EI + D + S+V L N++
Sbjct: 674 MAEIGMKLDLLAYTSLVWGLSHCNQLQ 700
Score = 226 bits (576), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 138/432 (31%), Positives = 218/432 (50%), Gaps = 13/432 (3%)
Query: 21 PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
PD VT+ S+I G R+ + F +++ CEPDV TY L+N C+ + L
Sbjct: 295 PDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEF 354
Query: 81 FEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSV 140
+ EM GNG +PN V+Y+T++D CKEG + +A + + M+ + PN TYTS+
Sbjct: 355 YREM-KGNG-----LKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSL 408
Query: 141 IRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGV 200
I C + ++A RL EM+ GV+ NVVT+ ++D LC +M EA L M GV
Sbjct: 409 IDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGV 468
Query: 201 RPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALS 260
P+ +YN L+ GF ++ A EL ++ G K + Y I G C ++IE A
Sbjct: 469 IPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKV 528
Query: 261 LYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLC 320
+ +EM GIK + +I+ TL F+ L DEM+ + T+ IDGLC
Sbjct: 529 VMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLC 588
Query: 321 KNGYIVEAVELFHTLRILKCEFDIRA----YNSLIDGLCKSGRLEIALELFRSLPCGVLV 376
KN + +AV+ F+ + +F ++A + ++IDGLCK ++E A LF + LV
Sbjct: 589 KNKLVSKAVDYFNRI---SNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLV 645
Query: 377 PNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIEL 436
P+ Y+ ++ G G + +A L M E + +++ + L+ G N+ K
Sbjct: 646 PDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSF 705
Query: 437 LHKMKEINVMPD 448
L +M + PD
Sbjct: 706 LEEMIGEGIHPD 717
Score = 196 bits (498), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 108/389 (27%), Positives = 206/389 (52%), Gaps = 3/389 (0%)
Query: 94 VCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEA 153
VC P + + L G +++A + +MK + P + ++ F ++
Sbjct: 187 VCVPGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDV 246
Query: 154 KRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDG 213
KR F +M+ G +P V T+N+++D +CK G ++ A L + M G+ PD TYN+++DG
Sbjct: 247 KRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDG 306
Query: 214 FCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPD 273
F GR++ F M+ M C+ V +Y+ LIN +CK ++ L Y EM G+KP+
Sbjct: 307 FGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPN 366
Query: 274 VVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFH 333
VV ++TL + +++A K + +M+R G+ + +TY + ID CK G + +A L +
Sbjct: 367 VVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGN 426
Query: 334 TLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDG 393
+ + E+++ Y +LIDGLC + R++ A ELF + ++PN+ +Y+ +I G
Sbjct: 427 EMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAK 486
Query: 394 QMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVS 453
MD+A +L +++ + P+++ + I G + + ++++MKE + ++ I +
Sbjct: 487 NMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYT 546
Query: 454 IVVDLLAKNEISLNSLPSFTVHEQQEEVD 482
++D K S N + ++ +E+D
Sbjct: 547 TLMDAYFK---SGNPTEGLHLLDEMKELD 572
Score = 181 bits (460), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 126/457 (27%), Positives = 221/457 (48%), Gaps = 10/457 (2%)
Query: 8 FVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNG 67
F VL C P F +L L + EA F+K++ F P + L++
Sbjct: 178 FDVLWSTRNVC-VPGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHR 236
Query: 68 LCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKD 127
+ T F++M G P TY +ID +CKEG V+ A+ L +MK
Sbjct: 237 FAKLGKTDDVKRFFKDM------IGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKF 290
Query: 128 KNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDE 187
+ + P+ VTY S+I GF ++ F EM D +P+V+T+N +++ CK GK+
Sbjct: 291 RGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPI 350
Query: 188 ASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILIN 247
M +G++P+ +Y+TL+D FC G + A + +V M +G ++Y+ LI+
Sbjct: 351 GLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLID 410
Query: 248 GYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAA 307
CK + A L +EML G++ +VV + L GL + +++ A +LF +M GV
Sbjct: 411 ANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIP 470
Query: 308 DTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELF 367
+ +Y I G K + A+EL + L+ + D+ Y + I GLC ++E A +
Sbjct: 471 NLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVM 530
Query: 368 RSLP-CGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIR 426
+ CG+ N + Y+ ++ G + L +M+E + V+TF +LI G +
Sbjct: 531 NEMKECGIKA-NSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCK 589
Query: 427 INEPSKVIELLHKMK-EINVMPDASIVSIVVDLLAKN 462
SK ++ +++ + + +A+I + ++D L K+
Sbjct: 590 NKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKD 626
Score = 179 bits (453), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 121/416 (29%), Positives = 200/416 (48%), Gaps = 7/416 (1%)
Query: 1 MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
+GR+ + C PD +T+ +LI C ++ + +++ G +P+V +
Sbjct: 310 VGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVS 369
Query: 61 YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
Y+TLV+ C+ A+ + +M G+V PN TYT++ID CK G + A
Sbjct: 370 YSTLVDAFCKEGMMQQAIKFYVDMR----RVGLV--PNEYTYTSLIDANCKIGNLSDAFR 423
Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
L +M ++ NVVTYT++I G C A+ EA+ LF +M GV PN+ ++N ++
Sbjct: 424 LGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFV 483
Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
K MD A LL+ + G++PD Y T + G C ++ AK + M+ G K
Sbjct: 484 KAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSL 543
Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
Y+ L++ Y K+ L L EM I+ VV L GL + V +A F+ +
Sbjct: 544 IYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRI 603
Query: 301 QRN-GVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGR 359
+ G+ A+ + IDGLCK+ + A LF + D AY SL+DG K G
Sbjct: 604 SNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGN 663
Query: 360 LEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVI 415
+ AL L + + +++ Y+ ++ GL + Q+ KAR +M + P+ +
Sbjct: 664 VLEALALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPDEV 719
Score = 140 bits (354), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 98/332 (29%), Positives = 169/332 (50%), Gaps = 7/332 (2%)
Query: 1 MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
+G +S F + +L+ + VT+T+LI GLC R+ EA LF K+ G P++ +
Sbjct: 415 IGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLAS 474
Query: 61 YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
Y L++G + + AL L E+ G G +P+ + Y T I GLC ++ AK
Sbjct: 475 YNALIHGFVKAKNMDRALELLNEL-KGRG-----IKPDLLLYGTFIWGLCSLEKIEAAKV 528
Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
++ +MK+ IK N + YT+++ + + + E L EM + ++ VVTF V++D LC
Sbjct: 529 VMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLC 588
Query: 181 KNGKMDEASRLLDLMIQH-GVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTV 239
KN + +A + + G++ +A + ++DG C +V A LF M G
Sbjct: 589 KNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDR 648
Query: 240 FSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDE 299
+Y+ L++G K + AL+L +M G+K D++ + +L GL +Q+++A +E
Sbjct: 649 TAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEE 708
Query: 300 MQRNGVAADTWTYRTFIDGLCKNGYIVEAVEL 331
M G+ D + + + G I EAVEL
Sbjct: 709 MIGEGIHPDEVLCISVLKKHYELGCIDEAVEL 740
Score = 84.3 bits (207), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 94/176 (53%), Gaps = 7/176 (3%)
Query: 24 VTFTSLIKGLCAESRIMEAAALFTKL-RVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFE 82
VTF LI GLC + +A F ++ FG + + +T +++GLC+ + A LFE
Sbjct: 578 VTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFE 637
Query: 83 EMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIR 142
+M G+V P+ YT+++DG K+G V +A L +M + +K +++ YTS++
Sbjct: 638 QMVQK----GLV--PDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLDLLAYTSLVW 691
Query: 143 GFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQH 198
G + +A+ EM+ +G+ P+ V ++ + + G +DEA L +++H
Sbjct: 692 GLSHCNQLQKARSFLEEMIGEGIHPDEVLCISVLKKHYELGCIDEAVELQSYLMKH 747
>sp|Q9SHK2|PPR17_ARATH Pentatricopeptide repeat-containing protein At1g06580
OS=Arabidopsis thaliana GN=At1g06580 PE=2 SV=1
Length = 500
Score = 240 bits (612), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 134/394 (34%), Positives = 218/394 (55%), Gaps = 7/394 (1%)
Query: 20 TPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALN 79
+ D +FT+LI C +R+ A + K+ G EP + T+ +LVNG C + A++
Sbjct: 111 SHDLYSFTTLIDCFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMS 170
Query: 80 LFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTS 139
L +++ G+ EPN V Y TIID LC++G V+ A ++L MK I+P+VVTY S
Sbjct: 171 LVDQIV------GLGYEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNS 224
Query: 140 VIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHG 199
+I ++ W + R+ +MM G+ P+V+TF+ ++D K G++ EA + + MIQ
Sbjct: 225 LITRLFHSGTWGVSARILSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRS 284
Query: 200 VRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGAL 259
V P+ TYN+L++G C+ G ++ AK++ + S G +Y+ LINGYCK K ++ +
Sbjct: 285 VNPNIVTYNSLINGLCIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGM 344
Query: 260 SLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGL 319
+ M G+ D +NTL+ G + + A K+ M GV D +T+ +DGL
Sbjct: 345 KILCVMSRDGVDGDTFTYNTLYQGYCQAGKFSAAEKVLGRMVSCGVHPDMYTFNILLDGL 404
Query: 320 CKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNV 379
C +G I +A+ L+ K I YN +I GLCK+ ++E A LF SL + P+V
Sbjct: 405 CDHGKIGKALVRLEDLQKSKTVVGIITYNIIIKGLCKADKVEDAWYLFCSLALKGVSPDV 464
Query: 380 VTYSIMIGGLCNDGQMDKARDLFLDME-ENAVVP 412
+TY M+ GL +A +L+ M+ E+ ++P
Sbjct: 465 ITYITMMIGLRRKRLWREAHELYRKMQKEDGLMP 498
Score = 206 bits (524), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 126/428 (29%), Positives = 219/428 (51%), Gaps = 7/428 (1%)
Query: 21 PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
P V F+ L+ + ++ +LF L + G D++++TTL++ CR + +AL+
Sbjct: 77 PSIVDFSRLLIAIAKLNKYEAVISLFRHLEMLGISHDLYSFTTLIDCFCRCARLSLALSC 136
Query: 81 FEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSV 140
+M + G EP+ VT+ ++++G C +A L+ Q+ +PNVV Y ++
Sbjct: 137 LGKMM----KLGF--EPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGLGYEPNVVIYNTI 190
Query: 141 IRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGV 200
I C N A + M G++P+VVT+N ++ L +G ++R+L M++ G+
Sbjct: 191 IDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSARILSDMMRMGI 250
Query: 201 RPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALS 260
PD T++ L+D + G++ AK+ + M + +Y+ LING C + ++ A
Sbjct: 251 SPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLCIHGLLDEAKK 310
Query: 261 LYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLC 320
+ + ++SKG P+ V +NTL G + +V+ K+ M R+GV DT+TY T G C
Sbjct: 311 VLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDTFTYNTLYQGYC 370
Query: 321 KNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVV 380
+ G A ++ + D+ +N L+DGLC G++ AL L V ++
Sbjct: 371 QAGKFSAAEKVLGRMVSCGVHPDMYTFNILLDGLCDHGKIGKALVRLEDLQKSKTVVGII 430
Query: 381 TYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKM 440
TY+I+I GLC +++ A LF + V P+VIT+ ++ G R + EL KM
Sbjct: 431 TYNIIIKGLCKADKVEDAWYLFCSLALKGVSPDVITYITMMIGLRRKRLWREAHELYRKM 490
Query: 441 -KEINVMP 447
KE +MP
Sbjct: 491 QKEDGLMP 498
Score = 204 bits (518), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 113/369 (30%), Positives = 195/369 (52%), Gaps = 6/369 (1%)
Query: 2 GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
R+S LG+++K F P VTF SL+ G C +R EA +L ++ G EP+V Y
Sbjct: 128 ARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGLGYEPNVVIY 187
Query: 62 TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
T+++ LC AL++ + M + G+ P+ VTY ++I L G + +
Sbjct: 188 NTIIDSLCEKGQVNTALDVLKHMK----KMGI--RPDVVTYNSLITRLFHSGTWGVSARI 241
Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
L M I P+V+T++++I + EAK+ + EM+ + V PN+VT+N +++ LC
Sbjct: 242 LSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLCI 301
Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
+G +DEA ++L++++ G P+A TYNTL++G+C RV+ ++ M G F+
Sbjct: 302 HGLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDTFT 361
Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
Y+ L GYC+ + A + M+S G+ PD+ N L GL + ++ +A +++Q
Sbjct: 362 YNTLYQGYCQAGKFSAAEKVLGRMVSCGVHPDMYTFNILLDGLCDHGKIGKALVRLEDLQ 421
Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
++ TY I GLCK + +A LF +L + D+ Y +++ GL +
Sbjct: 422 KSKTVVGIITYNIIIKGLCKADKVEDAWYLFCSLALKGVSPDVITYITMMIGLRRKRLWR 481
Query: 362 IALELFRSL 370
A EL+R +
Sbjct: 482 EAHELYRKM 490
Score = 181 bits (460), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 109/409 (26%), Positives = 212/409 (51%), Gaps = 8/409 (1%)
Query: 41 EAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTV 100
+A LF + P + ++ L+ + + + ++LF + G+ +
Sbjct: 62 DALTLFCDMAESHPLPSIVDFSRLLIAIAKLNKYEAVISLFRHLE----MLGI--SHDLY 115
Query: 101 TYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEM 160
++TT+ID C+ + A L +M +P++VT+ S++ GFC+ + EA L ++
Sbjct: 116 SFTTLIDCFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQI 175
Query: 161 MDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRV 220
+ G +PNVV +N I+D LC+ G+++ A +L M + G+RPD TYN+L+ +G
Sbjct: 176 VGLGYEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTW 235
Query: 221 NHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTL 280
+ + M MG V ++S LI+ Y K ++ A Y+EM+ + + P++V +N+L
Sbjct: 236 GVSARILSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSL 295
Query: 281 FVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKC 340
GL ++ A K+ + + G + TY T I+G CK + + +++ +
Sbjct: 296 INGLCIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGV 355
Query: 341 EFDIRAYNSLIDGLCKSGRLEIALELF-RSLPCGVLVPNVVTYSIMIGGLCNDGQMDKAR 399
+ D YN+L G C++G+ A ++ R + CGV P++ T++I++ GLC+ G++ KA
Sbjct: 356 DGDTFTYNTLYQGYCQAGKFSAAEKVLGRMVSCGVH-PDMYTFNILLDGLCDHGKIGKAL 414
Query: 400 DLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPD 448
D++++ V +IT++++I+G + ++ L + V PD
Sbjct: 415 VRLEDLQKSKTVVGIITYNIIIKGLCKADKVEDAWYLFCSLALKGVSPD 463
Score = 134 bits (336), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 89/356 (25%), Positives = 163/356 (45%), Gaps = 35/356 (9%)
Query: 137 YTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 196
Y +R ++ +N+A LF +M + P++V F+ ++ + K K + L +
Sbjct: 47 YRERLRSGLHSIKFNDALTLFCDMAESHPLPSIVDFSRLLIAIAKLNKYEAVISLFRHLE 106
Query: 197 QHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIE 256
G+ D +++ TL+D FC R++ A M +G + ++ ++ L+NG+C
Sbjct: 107 MLGISHDLYSFTTLIDCFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFY 166
Query: 257 GALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAF---------------------- 294
A+SL +++ G +P+VVI+NT+ L E QV A
Sbjct: 167 EAMSLVDQIVGLGYEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLI 226
Query: 295 -------------KLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCE 341
++ +M R G++ D T+ ID K G ++EA + ++ +
Sbjct: 227 TRLFHSGTWGVSARILSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVN 286
Query: 342 FDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDL 401
+I YNSLI+GLC G L+ A ++ L PN VTY+ +I G C ++D +
Sbjct: 287 PNIVTYNSLINGLCIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKI 346
Query: 402 FLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVD 457
M + V + T++ L +G+ + + S ++L +M V PD +I++D
Sbjct: 347 LCVMSRDGVDGDTFTYNTLYQGYCQAGKFSAAEKVLGRMVSCGVHPDMYTFNILLD 402
Score = 55.1 bits (131), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 61/128 (47%), Gaps = 6/128 (4%)
Query: 2 GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
G+ S VLGR++ PD TF L+ GLC +I +A L+ + TY
Sbjct: 373 GKFSAAEKVLGRMVSCGVHPDMYTFNILLDGLCDHGKIGKALVRLEDLQKSKTVVGIITY 432
Query: 62 TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
++ GLC+ A LF +A GV P+ +TY T++ GL ++ +A EL
Sbjct: 433 NIIIKGLCKADKVEDAWYLFCSLALK----GV--SPDVITYITMMIGLRRKRLWREAHEL 486
Query: 122 LLQMKDKN 129
+M+ ++
Sbjct: 487 YRKMQKED 494
Score = 50.1 bits (118), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 44/88 (50%)
Query: 2 GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
G++ V L + KS +T+ +IKGLC ++ +A LF L + G PDV TY
Sbjct: 408 GKIGKALVRLEDLQKSKTVVGIITYNIIIKGLCKADKVEDAWYLFCSLALKGVSPDVITY 467
Query: 62 TTLVNGLCRTSHTIVALNLFEEMANGNG 89
T++ GL R A L+ +M +G
Sbjct: 468 ITMMIGLRRKRLWREAHELYRKMQKEDG 495
Score = 33.1 bits (74), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 15/68 (22%), Positives = 34/68 (50%)
Query: 394 QMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVS 453
+ + A LF DM E+ +P+++ F L+ ++N+ VI L ++ + + D +
Sbjct: 59 KFNDALTLFCDMAESHPLPSIVDFSRLLIAIAKLNKYEAVISLFRHLEMLGISHDLYSFT 118
Query: 454 IVVDLLAK 461
++D +
Sbjct: 119 TLIDCFCR 126
>sp|Q9CA58|PP120_ARATH Putative pentatricopeptide repeat-containing protein At1g74580
OS=Arabidopsis thaliana GN=At1g74580 PE=3 SV=1
Length = 763
Score = 239 bits (611), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 142/450 (31%), Positives = 230/450 (51%), Gaps = 9/450 (2%)
Query: 2 GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
G + ++G +++ PD +T+ +LI GLC S+ EA K+ G EPD +TY
Sbjct: 265 GELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTY 324
Query: 62 TTLVNGLCRTSHTIVALNLFEEMANGNGEF-GVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
TL+ G C+ +A E G+ F G V P+ TY ++IDGLC EG ++A
Sbjct: 325 NTLIAGYCKGGMVQLA-----ERIVGDAVFNGFV--PDQFTYRSLIDGLCHEGETNRALA 377
Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
L + K IKPNV+ Y ++I+G EA +L EM ++G+ P V TFN++++ LC
Sbjct: 378 LFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLC 437
Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
K G + +A L+ +MI G PD FT+N L+ G+ ++ +A E+ M G V+
Sbjct: 438 KMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVY 497
Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
+Y+ L+NG CK + E + Y M+ KG P++ N L L +++ A L +EM
Sbjct: 498 TYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEM 557
Query: 301 QRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTL-RILKCEFDIRAYNSLIDGLCKSGR 359
+ V D T+ T IDG CKNG + A LF + K YN +I +
Sbjct: 558 KNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLN 617
Query: 360 LEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDM 419
+ +A +LF+ + L P+ TY +M+ G C G ++ L+M EN +P++ T
Sbjct: 618 VTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMMENGFIPSLTTLGR 677
Query: 420 LIRGFIRINEPSKVIELLHKMKEINVMPDA 449
+I + + ++H+M + ++P+A
Sbjct: 678 VINCLCVEDRVYEAAGIIHRMVQKGLVPEA 707
Score = 237 bits (605), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 153/485 (31%), Positives = 244/485 (50%), Gaps = 10/485 (2%)
Query: 2 GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
G V R+ TPD +FT +K C SR A L + GCE +V Y
Sbjct: 125 GYFDQAHKVYMRMRDRGITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAY 184
Query: 62 TTLVNGLCRTSHTIVALNLFEEM-ANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
T+V G + LF +M A+G +C T+ ++ LCK+G V + ++
Sbjct: 185 CTVVGGFYEENFKAEGYELFGKMLASGVS----LC---LSTFNKLLRVLCKKGDVKECEK 237
Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
LL ++ + + PN+ TY I+G C + + A R+ +++QG +P+V+T+N ++ LC
Sbjct: 238 LLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLC 297
Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
KN K EA L M+ G+ PD++TYNTL+ G+C G V A+ + G F
Sbjct: 298 KNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQF 357
Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
+Y LI+G C E AL+L++E L KGIKP+V+++NTL GL + A +L +EM
Sbjct: 358 TYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEM 417
Query: 301 QRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEF-DIRAYNSLIDGLCKSGR 359
G+ + T+ ++GLCK G + +A L + I K F DI +N LI G +
Sbjct: 418 SEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVM-ISKGYFPDIFTFNILIHGYSTQLK 476
Query: 360 LEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDM 419
+E ALE+ + + P+V TY+ ++ GLC + + + + M E PN+ TF++
Sbjct: 477 MENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNI 536
Query: 420 LIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEISLNSLPSFTVHEQQE 479
L+ R + + + LL +MK +V PDA ++D KN + F E+
Sbjct: 537 LLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAY 596
Query: 480 EVDES 484
+V S
Sbjct: 597 KVSSS 601
Score = 211 bits (538), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 129/458 (28%), Positives = 226/458 (49%), Gaps = 7/458 (1%)
Query: 5 SHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTL 64
+ G+ + G++L S + TF L++ LC + + E L K+ G P++FTY
Sbjct: 198 AEGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLF 257
Query: 65 VNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQ 124
+ GLC+ A+ + + +P+ +TY +I GLCK +A+ L +
Sbjct: 258 IQGLCQRGELDGAVRMVGCLIEQGP------KPDVITYNNLIYGLCKNSKFQEAEVYLGK 311
Query: 125 MKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGK 184
M ++ ++P+ TY ++I G+C A+R+ + + G P+ T+ ++D LC G+
Sbjct: 312 MVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGE 371
Query: 185 MDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSI 244
+ A L + + G++P+ YNTL+ G G + A +L M G V +++I
Sbjct: 372 TNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNI 431
Query: 245 LINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNG 304
L+NG CK + A L M+SKG PD+ N L G ++E A ++ D M NG
Sbjct: 432 LVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNG 491
Query: 305 VAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIAL 364
V D +TY + ++GLCK + +E + T+ C ++ +N L++ LC+ +L+ AL
Sbjct: 492 VDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEAL 551
Query: 365 ELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEEN-AVVPNVITFDMLIRG 423
L + + P+ VT+ +I G C +G +D A LF MEE V + T++++I
Sbjct: 552 GLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHA 611
Query: 424 FIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
F + +L +M + + PD ++VD K
Sbjct: 612 FTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCK 649
Score = 185 bits (469), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 116/396 (29%), Positives = 187/396 (47%), Gaps = 6/396 (1%)
Query: 61 YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
Y + R A+N+FE M + CEP +Y I+ L G+ D+A +
Sbjct: 79 YVGAMKNYGRKGKVQEAVNVFERMDFYD------CEPTVFSYNAIMSVLVDSGYFDQAHK 132
Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
+ ++M+D+ I P+V ++T ++ FC + A RL M QG + NVV + ++
Sbjct: 133 VYMRMRDRGITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFY 192
Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
+ E L M+ GV T+N LL C G V ++L + G +F
Sbjct: 193 EENFKAEGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLF 252
Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
+Y++ I G C+ E++GA+ + ++ +G KPDV+ +N L GL + + + A +M
Sbjct: 253 TYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKM 312
Query: 301 QRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRL 360
G+ D++TY T I G CK G + A + D Y SLIDGLC G
Sbjct: 313 VNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGET 372
Query: 361 EIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDML 420
AL LF + PNV+ Y+ +I GL N G + +A L +M E ++P V TF++L
Sbjct: 373 NRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNIL 432
Query: 421 IRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVV 456
+ G ++ S L+ M PD +I++
Sbjct: 433 VNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILI 468
Score = 152 bits (385), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 93/360 (25%), Positives = 175/360 (48%)
Query: 102 YTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMM 161
Y + ++G V +A + +M + +P V +Y +++ + +++A ++++ M
Sbjct: 79 YVGAMKNYGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMR 138
Query: 162 DQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVN 221
D+G+ P+V +F + M CK + A RLL+ M G + Y T++ GF
Sbjct: 139 DRGITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKA 198
Query: 222 HAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLF 281
ELF M + G + +++ L+ CK +++ L +++ +G+ P++ +N
Sbjct: 199 EGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFI 258
Query: 282 VGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCE 341
GL + +++ A ++ + G D TY I GLCKN EA + E
Sbjct: 259 QGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLE 318
Query: 342 FDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDL 401
D YN+LI G CK G +++A + VP+ TY +I GLC++G+ ++A L
Sbjct: 319 PDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALAL 378
Query: 402 FLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
F + + PNVI ++ LI+G + +L ++M E ++P+ +I+V+ L K
Sbjct: 379 FNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCK 438
Score = 137 bits (344), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 81/276 (29%), Positives = 140/276 (50%), Gaps = 7/276 (2%)
Query: 1 MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
MG VS ++ ++ + PD TF LI G + ++ A + + G +PDV+T
Sbjct: 439 MGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYT 498
Query: 61 YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
Y +L+NGLC+TS + ++ M C PN T+ +++ LC+ +D+A
Sbjct: 499 YNSLLNGLCKTSKFEDVMETYKTMVEKG------CAPNLFTFNILLESLCRYRKLDEALG 552
Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQ-GVQPNVVTFNVIMDEL 179
LL +MK+K++ P+ VT+ ++I GFC D + A LF +M + V + T+N+I+
Sbjct: 553 LLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAF 612
Query: 180 CKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTV 239
+ + A +L M+ + PD +TY ++DGFC TG VN + + M G ++
Sbjct: 613 TEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMMENGFIPSL 672
Query: 240 FSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVV 275
+ +IN C + A + M+ KG+ P+ V
Sbjct: 673 TTLGRVINCLCVEDRVYEAAGIIHRMVQKGLVPEAV 708
Score = 108 bits (269), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 67/246 (27%), Positives = 114/246 (46%), Gaps = 44/246 (17%)
Query: 3 RVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYT 62
++ + +L +L + PD T+ SL+ GLC S+ + + + GC P++FT+
Sbjct: 476 KMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFN 535
Query: 63 TLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKA---- 118
L+ LCR AL L EEM N + P+ VT+ T+IDG CK G +D A
Sbjct: 536 ILLESLCRYRKLDEALGLLEEMKNKS------VNPDAVTFGTLIDGFCKNGDLDGAYTLF 589
Query: 119 --------------------------------KELLLQMKDKNIKPNVVTYTSVIRGFCY 146
++L +M D+ + P+ TY ++ GFC
Sbjct: 590 RKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCK 649
Query: 147 AKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFT 206
+ N + +EMM+ G P++ T +++ LC ++ EA+ ++ M+Q G+ P+A
Sbjct: 650 TGNVNLGYKFLLEMMENGFIPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQKGLVPEAV- 708
Query: 207 YNTLLD 212
NT+ D
Sbjct: 709 -NTICD 713
Score = 100 bits (248), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 79/321 (24%), Positives = 145/321 (45%), Gaps = 5/321 (1%)
Query: 138 TSVIRGFCYAKDWNEAKRLFIEMMDQ-GVQPNVVTFNVIMDELCKNGKMDEASRLL-DLM 195
T+VI+ C KD +A +F M + G + + T+ ++++L GK + +L D+
Sbjct: 11 TAVIK--C-QKDPMKALEMFNSMRKEVGFKHTLSTYRSVIEKLGYYGKFEAMEEVLVDMR 67
Query: 196 IQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEI 255
G Y + + G+V A +F M+ C+ TVFSY+ +++ +
Sbjct: 68 ENVGNHMLEGVYVGAMKNYGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYF 127
Query: 256 EGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTF 315
+ A +Y M +GI PDV + + A +L + M G + Y T
Sbjct: 128 DQAHKVYMRMRDRGITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTV 187
Query: 316 IDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVL 375
+ G + + E ELF + + +N L+ LCK G ++ +L + +
Sbjct: 188 VGGFYEENFKAEGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGV 247
Query: 376 VPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIE 435
+PN+ TY++ I GLC G++D A + + E P+VIT++ LI G + ++ +
Sbjct: 248 LPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEV 307
Query: 436 LLHKMKEINVMPDASIVSIVV 456
L KM + PD+ + ++
Sbjct: 308 YLGKMVNEGLEPDSYTYNTLI 328
>sp|Q9T0D6|PP306_ARATH Pentatricopeptide repeat-containing protein At4g11690
OS=Arabidopsis thaliana GN=At4g11690 PE=2 SV=1
Length = 566
Score = 239 bits (609), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 137/408 (33%), Positives = 217/408 (53%), Gaps = 6/408 (1%)
Query: 16 KSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTI 75
KS D +F LIKG C I ++ L +L FG P+V YTTL++G C+
Sbjct: 156 KSKVVLDVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIE 215
Query: 76 VALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVV 135
A +LF EM G+ G+V N TYT +I+GL K G + E+ +M++ + PN+
Sbjct: 216 KAKDLFFEM----GKLGLVA--NERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLY 269
Query: 136 TYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLM 195
TY V+ C +A ++F EM ++GV N+VT+N ++ LC+ K++EA++++D M
Sbjct: 270 TYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQM 329
Query: 196 IQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEI 255
G+ P+ TYNTL+DGFC G++ A L ++S G ++ +Y+IL++G+C+ +
Sbjct: 330 KSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDT 389
Query: 256 EGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTF 315
GA + EM +GIKP V + L +E+A +L M+ G+ D TY
Sbjct: 390 SGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVL 449
Query: 316 IDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVL 375
I G C G + EA LF ++ CE + YN++I G CK G AL+L + + L
Sbjct: 450 IHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKEL 509
Query: 376 VPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRG 423
PNV +Y MI LC + + +A L M ++ + P+ ++ R
Sbjct: 510 APNVASYRYMIEVLCKERKSKEAERLVEKMIDSGIDPSTSILSLISRA 557
Score = 223 bits (569), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 138/452 (30%), Positives = 232/452 (51%), Gaps = 13/452 (2%)
Query: 19 FTPDAVTFTSLIKGLCAESRIMEAAALFT--KLRVFGCEPDVFTYTTLVNGLCRTSHTIV 76
F P + F L+ + S + + F K +V DV+++ L+ G C
Sbjct: 125 FVPGSNCFNYLLTFVVGSSSFNQWWSFFNENKSKVV---LDVYSFGILIKGCCEAGEIEK 181
Query: 77 ALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVT 136
+ +L E+ EFG PN V YTT+IDG CK+G ++KAK+L +M + N T
Sbjct: 182 SFDLLIELT----EFGF--SPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANERT 235
Query: 137 YTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 196
YT +I G + ++ +M + GV PN+ T+N +M++LCK+G+ +A ++ D M
Sbjct: 236 YTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMR 295
Query: 197 QHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIE 256
+ GV + TYNTL+ G C ++N A ++ M+S G + +Y+ LI+G+C ++
Sbjct: 296 ERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLG 355
Query: 257 GALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFI 316
ALSL ++ S+G+ P +V +N L G A K+ EM+ G+ TY I
Sbjct: 356 KALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILI 415
Query: 317 DGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLV 376
D ++ + +A++L ++ L D+ Y+ LI G C G++ A LF+S+
Sbjct: 416 DTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCE 475
Query: 377 PNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIEL 436
PN V Y+ MI G C +G +A L +MEE + PNV ++ +I + + + L
Sbjct: 476 PNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIEVLCKERKSKEAERL 535
Query: 437 LHKMKEINVMPDASIVSIVVDLLAKNEISLNS 468
+ KM + + P SI+S++ AKN+ ++S
Sbjct: 536 VEKMIDSGIDPSTSILSLISR--AKNDSHVSS 565
Score = 189 bits (480), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 113/369 (30%), Positives = 187/369 (50%), Gaps = 41/369 (11%)
Query: 2 GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
G + F +L + + F+P+ V +T+LI G C + I +A LF ++ G + TY
Sbjct: 177 GEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANERTY 236
Query: 62 TTLVNG-----------------------------------LCRTSHTIVALNLFEEMAN 86
T L+NG LC+ T A +F+EM
Sbjct: 237 TVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMR- 295
Query: 87 GNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCY 146
E GV C N VTY T+I GLC+E +++A +++ QMK I PN++TY ++I GFC
Sbjct: 296 ---ERGVSC--NIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCG 350
Query: 147 AKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFT 206
+A L ++ +G+ P++VT+N+++ C+ G A++++ M + G++P T
Sbjct: 351 VGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVT 410
Query: 207 YNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEML 266
Y L+D F + + A +L +SME +G V +YS+LI+G+C ++ A L+ M+
Sbjct: 411 YTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMV 470
Query: 267 SKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIV 326
K +P+ VI+NT+ +G + RA KL EM+ +A + +YR I+ LCK
Sbjct: 471 EKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIEVLCKERKSK 530
Query: 327 EAVELFHTL 335
EA L +
Sbjct: 531 EAERLVEKM 539
Score = 177 bits (448), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 102/355 (28%), Positives = 183/355 (51%), Gaps = 1/355 (0%)
Query: 102 YTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMM 161
Y II+ + ++ + +M D P + ++ + +N+ F E
Sbjct: 97 YEVIINSYVQSQSLNLSISYFNEMVDNGFVPGSNCFNYLLTFVVGSSSFNQWWSFFNENK 156
Query: 162 DQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVN 221
+ V +V +F +++ C+ G+++++ LL + + G P+ Y TL+DG C G +
Sbjct: 157 SK-VVLDVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIE 215
Query: 222 HAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLF 281
AK+LF M +G +Y++LING KN + +Y +M G+ P++ +N +
Sbjct: 216 KAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVM 275
Query: 282 VGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCE 341
L + + + AF++FDEM+ GV+ + TY T I GLC+ + EA ++ ++
Sbjct: 276 NQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGIN 335
Query: 342 FDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDL 401
++ YN+LIDG C G+L AL L R L L P++VTY+I++ G C G A +
Sbjct: 336 PNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKM 395
Query: 402 FLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVV 456
+MEE + P+ +T+ +LI F R + K I+L M+E+ ++PD S+++
Sbjct: 396 VKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLI 450
Score = 165 bits (418), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 109/419 (26%), Positives = 205/419 (48%), Gaps = 7/419 (1%)
Query: 61 YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
Y ++N ++ ++++ F EM + G V P + + ++ + ++
Sbjct: 97 YEVIINSYVQSQSLNLSISYFNEMVDN----GFV--PGSNCFNYLLTFVVGSSSFNQWWS 150
Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
+ K K + +V ++ +I+G C A + ++ L IE+ + G PNVV + ++D C
Sbjct: 151 FFNENKSK-VVLDVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCC 209
Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
K G++++A L M + G+ + TY L++G G E++ M+ G ++
Sbjct: 210 KKGEIEKAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLY 269
Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
+Y+ ++N CK+ + A ++ EM +G+ ++V +NTL GL ++ A K+ D+M
Sbjct: 270 TYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQM 329
Query: 301 QRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRL 360
+ +G+ + TY T IDG C G + +A+ L L+ + YN L+ G C+ G
Sbjct: 330 KSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDT 389
Query: 361 EIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDML 420
A ++ + + + P+ VTY+I+I M+KA L L MEE +VP+V T+ +L
Sbjct: 390 SGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVL 449
Query: 421 IRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEISLNSLPSFTVHEQQE 479
I GF + ++ L M E N P+ I + ++ K S +L E++E
Sbjct: 450 IHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKE 508
Score = 152 bits (384), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 84/275 (30%), Positives = 145/275 (52%), Gaps = 6/275 (2%)
Query: 2 GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
GR F V + + + + VT+ +LI GLC E ++ EA + +++ G P++ TY
Sbjct: 282 GRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITY 341
Query: 62 TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
TL++G C AL+L ++ + P+ VTY ++ G C++G A ++
Sbjct: 342 NTLIDGFCGVGKLGKALSLCRDLKSRG------LSPSLVTYNILVSGFCRKGDTSGAAKM 395
Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
+ +M+++ IKP+ VTYT +I F + + +A +L + M + G+ P+V T++V++ C
Sbjct: 396 VKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCI 455
Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
G+M+EASRL M++ P+ YNT++ G+C G A +L ME V S
Sbjct: 456 KGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVAS 515
Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVI 276
Y +I CK ++ + A L +M+ GI P I
Sbjct: 516 YRYMIEVLCKERKSKEAERLVEKMIDSGIDPSTSI 550
Score = 70.1 bits (170), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 62/247 (25%), Positives = 111/247 (44%), Gaps = 21/247 (8%)
Query: 236 KHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFK 295
+HT S SIL+ A SL +++S I ++L L E + F+
Sbjct: 36 QHTHESISILLRLLLSGNLFSHAQSLLLQVISGKIHSQFFTSSSLLHYLTESETSKTKFR 95
Query: 296 LFDEMQRNGVAADTWTYR-TFIDGLCKNGYIVEAVELFHTLRIL---------------- 338
L++ + + V + + ++ + + NG+ V F+ L
Sbjct: 96 LYEVIINSYVQSQSLNLSISYFNEMVDNGF-VPGSNCFNYLLTFVVGSSSFNQWWSFFNE 154
Query: 339 ---KCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQM 395
K D+ ++ LI G C++G +E + +L L PNVV Y+ +I G C G++
Sbjct: 155 NKSKVVLDVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEI 214
Query: 396 DKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIV 455
+KA+DLF +M + +V N T+ +LI G + + E+ KM+E V P+ + V
Sbjct: 215 EKAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCV 274
Query: 456 VDLLAKN 462
++ L K+
Sbjct: 275 MNQLCKD 281
>sp|Q0WVK7|PPR12_ARATH Pentatricopeptide repeat-containing protein At1g05670,
mitochondrial OS=Arabidopsis thaliana GN=At1g05670 PE=2
SV=1
Length = 741
Score = 239 bits (609), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 133/463 (28%), Positives = 240/463 (51%), Gaps = 6/463 (1%)
Query: 1 MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
+GR+ +L + +TPD +++++++ G C + + L ++ G +P+ +
Sbjct: 259 LGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYI 318
Query: 61 YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
Y +++ LCR A F EM G++ P+TV YTT+IDG CK G + A +
Sbjct: 319 YGSIIGLLCRICKLAEAEEAFSEMIRQ----GIL--PDTVVYTTLIDGFCKRGDIRAASK 372
Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
+M ++I P+V+TYT++I GFC D EA +LF EM +G++P+ VTF +++ C
Sbjct: 373 FFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYC 432
Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
K G M +A R+ + MIQ G P+ TY TL+DG C G ++ A EL M +G + +F
Sbjct: 433 KAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIF 492
Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
+Y+ ++NG CK+ IE A+ L E + G+ D V + TL + ++++A ++ EM
Sbjct: 493 TYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEM 552
Query: 301 QRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRL 360
G+ T+ ++G C +G + + +L + + + +NSL+ C L
Sbjct: 553 LGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNL 612
Query: 361 EIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDML 420
+ A +++ + + P+ TY ++ G C M +A LF +M+ +V T+ +L
Sbjct: 613 KAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVL 672
Query: 421 IRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNE 463
I+GF++ + + E+ +M+ + D I D K +
Sbjct: 673 IKGFLKRKKFLEAREVFDQMRREGLAADKEIFDFFSDTKYKGK 715
Score = 221 bits (562), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 131/451 (29%), Positives = 220/451 (48%), Gaps = 6/451 (1%)
Query: 22 DAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLF 81
+ ++ +I +C RI EA L + + G PDV +Y+T+VNG CR L
Sbjct: 245 NVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLI 304
Query: 82 EEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVI 141
E M +PN+ Y +II LC+ + +A+E +M + I P+ V YT++I
Sbjct: 305 EVMKRKG------LKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLI 358
Query: 142 RGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVR 201
GFC D A + F EM + + P+V+T+ I+ C+ G M EA +L M G+
Sbjct: 359 DGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLE 418
Query: 202 PDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSL 261
PD+ T+ L++G+C G + A + M GC V +Y+ LI+G CK +++ A L
Sbjct: 419 PDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANEL 478
Query: 262 YSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCK 321
EM G++P++ +N++ GL + +E A KL E + G+ ADT TY T +D CK
Sbjct: 479 LHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCK 538
Query: 322 NGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVT 381
+G + +A E+ + + I +N L++G C G LE +L + + PN T
Sbjct: 539 SGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATT 598
Query: 382 YSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMK 441
++ ++ C + A ++ DM V P+ T++ L++G + + L +MK
Sbjct: 599 FNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMK 658
Query: 442 EINVMPDASIVSIVVDLLAKNEISLNSLPSF 472
S S+++ K + L + F
Sbjct: 659 GKGFSVSVSTYSVLIKGFLKRKKFLEAREVF 689
Score = 220 bits (560), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 130/422 (30%), Positives = 224/422 (53%), Gaps = 13/422 (3%)
Query: 39 IMEAAALFTKLRVFGCEPDVFT---YTTLVNGLC-RTSHTIVALNLFEEMANGNGEFGVV 94
+ EA +F K+ +G V + Y T ++ C +T+ I+ F E+ V
Sbjct: 191 LREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFREFPEVG--------V 242
Query: 95 CEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAK 154
C N +Y +I +C+ G + +A LLL M+ K P+V++Y++V+ G+C + ++
Sbjct: 243 CW-NVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVW 301
Query: 155 RLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGF 214
+L M +G++PN + I+ LC+ K+ EA MI+ G+ PD Y TL+DGF
Sbjct: 302 KLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGF 361
Query: 215 CLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDV 274
C G + A + F M S V +Y+ +I+G+C+ ++ A L+ EM KG++PD
Sbjct: 362 CKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDS 421
Query: 275 VIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHT 334
V L G + ++ AF++ + M + G + + TY T IDGLCK G + A EL H
Sbjct: 422 VTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHE 481
Query: 335 LRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQ 394
+ + + +I YNS+++GLCKSG +E A++L L + VTY+ ++ C G+
Sbjct: 482 MWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGE 541
Query: 395 MDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSI 454
MDKA+++ +M + P ++TF++L+ GF +LL+ M + P+A+ +
Sbjct: 542 MDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNS 601
Query: 455 VV 456
+V
Sbjct: 602 LV 603
Score = 170 bits (430), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 92/307 (29%), Positives = 162/307 (52%)
Query: 156 LFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFC 215
+F E + GV NV ++N+++ +C+ G++ EA LL LM G PD +Y+T+++G+C
Sbjct: 233 VFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYC 292
Query: 216 LTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVV 275
G ++ +L M+ G K + Y +I C+ ++ A +SEM+ +GI PD V
Sbjct: 293 RFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTV 352
Query: 276 IHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTL 335
++ TL G + + A K F EM + D TY I G C+ G +VEA +LFH +
Sbjct: 353 VYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEM 412
Query: 336 RILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQM 395
E D + LI+G CK+G ++ A + + PNVVTY+ +I GLC +G +
Sbjct: 413 FCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDL 472
Query: 396 DKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIV 455
D A +L +M + + PN+ T++ ++ G + + ++L+ + + + D + +
Sbjct: 473 DSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTL 532
Query: 456 VDLLAKN 462
+D K+
Sbjct: 533 MDAYCKS 539
Score = 73.2 bits (178), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 90/198 (45%), Gaps = 8/198 (4%)
Query: 2 GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
G + +L +L P VTF L+ G C + + L + G P+ T+
Sbjct: 540 GEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTF 599
Query: 62 TTLVNGLCRTSHTIVALNLFEEM-ANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
+LV C ++ A ++++M + G G P+ TY ++ G CK + +A
Sbjct: 600 NSLVKQYCIRNNLKAATAIYKDMCSRGVG-------PDGKTYENLVKGHCKARNMKEAWF 652
Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
L +MK K +V TY+ +I+GF K + EA+ +F +M +G+ + F+ D
Sbjct: 653 LFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIFDFFSDTKY 712
Query: 181 KNGKMDEASRLLDLMIQH 198
K + D +D +I++
Sbjct: 713 KGKRPDTIVDPIDEIIEN 730
Score = 61.6 bits (148), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 74/157 (47%), Gaps = 1/157 (0%)
Query: 306 AADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKS-GRLEIAL 364
+D + F L G + EA +F + + + N + L K + A+
Sbjct: 172 GSDPRVFDVFFQVLVDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAI 231
Query: 365 ELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGF 424
+FR P + NV +Y+I+I +C G++ +A L L ME P+VI++ ++ G+
Sbjct: 232 IVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGY 291
Query: 425 IRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
R E KV +L+ MK + P++ I ++ LL +
Sbjct: 292 CRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCR 328
>sp|Q9SFV9|PP218_ARATH Pentatricopeptide repeat-containing protein At3g07290,
mitochondrial OS=Arabidopsis thaliana GN=At3g07290 PE=2
SV=1
Length = 880
Score = 236 bits (601), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 130/423 (30%), Positives = 222/423 (52%), Gaps = 6/423 (1%)
Query: 20 TPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALN 79
P++V+++ LI GLC R+ EA L ++ GC+P TYT L+ LC A N
Sbjct: 263 APNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFN 322
Query: 80 LFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTS 139
LF+EM C+PN TYT +IDGLC++G +++A + +M I P+V+TY +
Sbjct: 323 LFDEMIPRG------CKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNA 376
Query: 140 VIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHG 199
+I G+C A L M + +PNV TFN +M+ LC+ GK +A LL M+ +G
Sbjct: 377 LINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNG 436
Query: 200 VRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGAL 259
+ PD +YN L+DG C G +N A +L SM + +++ +IN +CK + + A
Sbjct: 437 LSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVAS 496
Query: 260 SLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGL 319
+ ML KGI D V TL G+ ++ + A + + + + + + +D L
Sbjct: 497 AFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRILTTPHSLNVILDML 556
Query: 320 CKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNV 379
K + E + + + L + Y +L+DGL +SG + + + + +PNV
Sbjct: 557 SKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRILELMKLSGCLPNV 616
Query: 380 VTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHK 439
Y+I+I GLC G++++A L M+++ V PN +T+ ++++G++ + + +E +
Sbjct: 617 YPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALETVRA 676
Query: 440 MKE 442
M E
Sbjct: 677 MVE 679
Score = 213 bits (541), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 129/433 (29%), Positives = 218/433 (50%), Gaps = 22/433 (5%)
Query: 1 MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
+GR+ F + ++ + P T+T LIK LC I +A LF ++ GC+P+V T
Sbjct: 279 VGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHT 338
Query: 61 YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCE--------PNTVTYTTIIDGLCKE 112
YT L++GLCR E ANG VC P+ +TY +I+G CK+
Sbjct: 339 YTVLIDGLCRDGKI--------EEANG------VCRKMVKDRIFPSVITYNALINGYCKD 384
Query: 113 GFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTF 172
G V A ELL M+ + KPNV T+ ++ G C +A L M+D G+ P++V++
Sbjct: 385 GRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSY 444
Query: 173 NVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMES 232
NV++D LC+ G M+ A +LL M + PD T+ +++ FC G+ + A M
Sbjct: 445 NVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVASAFLGLMLR 504
Query: 233 MGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVER 292
G + + LI+G CK + AL + ++ I N + L + +V+
Sbjct: 505 KGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRILTTPHSLNVILDMLSKGCKVKE 564
Query: 293 AFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLID 352
+ ++ + G+ TY T +DGL ++G I + + +++ C ++ Y +I+
Sbjct: 565 ELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRILELMKLSGCLPNVYPYTIIIN 624
Query: 353 GLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVP 412
GLC+ GR+E A +L ++ + PN VTY++M+ G N+G++D+A + M E
Sbjct: 625 GLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALETVRAMVERGYEL 684
Query: 413 NVITFDMLIRGFI 425
N + L++GF+
Sbjct: 685 NDRIYSSLLQGFV 697
Score = 176 bits (447), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 139/554 (25%), Positives = 236/554 (42%), Gaps = 103/554 (18%)
Query: 2 GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKL---RVFGCEPDV 58
G + F + ++ P+ T+T LI GLC + +I EA + K+ R+F P V
Sbjct: 315 GLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIF---PSV 371
Query: 59 FTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKA 118
TY L+NG C+ + A L M C+PN T+ +++GLC+ G KA
Sbjct: 372 ITYNALINGYCKDGRVVPAFELLTVMEKR------ACKPNVRTFNELMEGLCRVGKPYKA 425
Query: 119 KELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDE 178
LL +M D + P++V+Y +I G C N A +L M ++P+ +TF I++
Sbjct: 426 VHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINA 485
Query: 179 LCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVN----------------- 221
CK GK D AS L LM++ G+ D T TL+DG C G+
Sbjct: 486 FCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRILTT 545
Query: 222 -HAKELFVSMESMGCK-----------------HTVFSYSILINGYCKNKEIEGALSLYS 263
H+ + + M S GCK +V +Y+ L++G ++ +I G+ +
Sbjct: 546 PHSLNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRILE 605
Query: 264 EMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNG 323
M G P+V + + GL + +VE A KL MQ +GV+ + TY + G NG
Sbjct: 606 LMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNG 665
Query: 324 YIVEAVELFHTLRILKCEFDIRAYNSLIDG------------------------------ 353
+ A+E + E + R Y+SL+ G
Sbjct: 666 KLDRALETVRAMVERGYELNDRIYSSLLQGFVLSQKGIDNSEESTVSDIALRETDPECIN 725
Query: 354 -----------------------LCKSGRLEIALELFRS-LPCGVLVPNVVTYSIMIGGL 389
LCK GR + + +L ++ L GV + + I++
Sbjct: 726 ELISVVEQLGGCISGLCIFLVTRLCKEGRTDESNDLVQNVLERGVFLEKAM--DIIMESY 783
Query: 390 CNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDA 449
C+ + K +L + ++ VP+ +F ++I+G + + + EL+ ++ N + +
Sbjct: 784 CSKKKHTKCMELITLVLKSGFVPSFKSFCLVIQGLKKEGDAERARELVMELLTSNGVVEK 843
Query: 450 SIVSIVVDLLAKNE 463
S V V+ L + +
Sbjct: 844 SGVLTYVECLMEGD 857
Score = 154 bits (388), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 100/392 (25%), Positives = 184/392 (46%), Gaps = 41/392 (10%)
Query: 36 ESRIMEAAALFTKLR-VFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVV 94
E +++ F +LR VFG + Y++L+ L + +A + M G++
Sbjct: 137 EKEMLKLMYCFDELREVFGFRLNYPCYSSLLMSLAKLDLGFLAYVTYRRMEADGFVVGMI 196
Query: 95 CEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAK 154
Y TI++ LCK G+ + A+ + ++ + TS++ GFC + +A
Sbjct: 197 ------DYRTIVNALCKNGYTEAAEMFMSKILKIGFVLDSHIGTSLLLGFCRGLNLRDAL 250
Query: 155 RLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGF 214
++F ++M + V P++ +Y+ L+ G
Sbjct: 251 KVF-DVMSKEVT---------------------------------CAPNSVSYSILIHGL 276
Query: 215 CLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDV 274
C GR+ A L M GC+ + +Y++LI C I+ A +L+ EM+ +G KP+V
Sbjct: 277 CEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNV 336
Query: 275 VIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHT 334
+ L GL ++E A + +M ++ + TY I+G CK+G +V A EL
Sbjct: 337 HTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTV 396
Query: 335 LRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQ 394
+ C+ ++R +N L++GLC+ G+ A+ L + + L P++V+Y+++I GLC +G
Sbjct: 397 MEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGH 456
Query: 395 MDKARDLFLDMEENAVVPNVITFDMLIRGFIR 426
M+ A L M + P+ +TF +I F +
Sbjct: 457 MNTAYKLLSSMNCFDIEPDCLTFTAIINAFCK 488
Score = 107 bits (266), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 110/460 (23%), Positives = 177/460 (38%), Gaps = 122/460 (26%)
Query: 1 MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
+G+ +L R+L + +PD V++ LI GLC E + A L + + F EPD T
Sbjct: 419 VGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLT 478
Query: 61 YT-----------------------------------TLVNGLCRTSHTIVALNLFE--- 82
+T TL++G+C+ T AL + E
Sbjct: 479 FTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLV 538
Query: 83 ----------------------------EMANGNGEFGVVCEPNTVTYTTIIDGLCKEGF 114
M + G+V P+ VTYTT++DGL + G
Sbjct: 539 KMRILTTPHSLNVILDMLSKGCKVKEELAMLGKINKLGLV--PSVVTYTTLVDGLIRSGD 596
Query: 115 VDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNV 174
+ + +L MK PNV YT +I G C EA++L M D GV PN VT+ V
Sbjct: 597 ITGSFRILELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTV 656
Query: 175 IMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGR-VNHAKELFVS---- 229
++ NGK+D A + M++ G + Y++LL GF L+ + +++++E VS
Sbjct: 657 MVKGYVNNGKLDRALETVRAMVERGYELNDRIYSSLLQGFVLSQKGIDNSEESTVSDIAL 716
Query: 230 --------------MESMG--------------CK----------------HTVF---SY 242
+E +G CK VF +
Sbjct: 717 RETDPECINELISVVEQLGGCISGLCIFLVTRLCKEGRTDESNDLVQNVLERGVFLEKAM 776
Query: 243 SILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDE-MQ 301
I++ YC K+ + L + +L G P + GL + ERA +L E +
Sbjct: 777 DIIMESYCSKKKHTKCMELITLVLKSGFVPSFKSFCLVIQGLKKEGDAERARELVMELLT 836
Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCE 341
NGV + T+++ L + + E+ + L C
Sbjct: 837 SNGVVEKSGVL-TYVECLMEGDETGDCSEVIDLVDQLHCR 875
Score = 82.8 bits (203), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 100/197 (50%), Gaps = 5/197 (2%)
Query: 269 GIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEA 328
G + + +++L + L ++ A+ + M+ +G YRT ++ LCKNGY EA
Sbjct: 155 GFRLNYPCYSSLLMSLAKLDLGFLAYVTYRRMEADGFVVGMIDYRTIVNALCKNGY-TEA 213
Query: 329 VELFHTLRILKCEFDIRAY--NSLIDGLCKSGRLEIALELFRSLPCGV-LVPNVVTYSIM 385
E+F + +ILK F + ++ SL+ G C+ L AL++F + V PN V+YSI+
Sbjct: 214 AEMFMS-KILKIGFVLDSHIGTSLLLGFCRGLNLRDALKVFDVMSKEVTCAPNSVSYSIL 272
Query: 386 IGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINV 445
I GLC G++++A L M E P+ T+ +LI+ K L +M
Sbjct: 273 IHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRGC 332
Query: 446 MPDASIVSIVVDLLAKN 462
P+ ++++D L ++
Sbjct: 333 KPNVHTYTVLIDGLCRD 349
>sp|Q9SUD8|PP340_ARATH Pentatricopeptide repeat-containing protein At4g28010
OS=Arabidopsis thaliana GN=At4g28010 PE=2 SV=1
Length = 704
Score = 235 bits (599), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 137/436 (31%), Positives = 221/436 (50%), Gaps = 10/436 (2%)
Query: 24 VTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEE 83
VT+ LI C ++ EA +++ G E D+ YT+L+ G C LF+E
Sbjct: 213 VTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDE 272
Query: 84 -MANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIR 142
+ G+ P +TY T+I G CK G + +A E+ M ++ ++PNV TYT +I
Sbjct: 273 VLERGDS-------PCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLID 325
Query: 143 GFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRP 202
G C EA +L M+++ +PN VT+N+I+++LCK+G + +A +++LM + RP
Sbjct: 326 GLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRP 385
Query: 203 DAFTYNTLLDGFCLTGRVNHAKELFVSM--ESMGCKHTVFSYSILINGYCKNKEIEGALS 260
D TYN LL G C G ++ A +L M +S V SY+ LI+G CK + AL
Sbjct: 386 DNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALD 445
Query: 261 LYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLC 320
+Y ++ K D V N L + V +A +L+ ++ + + ++ TY IDG C
Sbjct: 446 IYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFC 505
Query: 321 KNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVV 380
K G + A L +R+ + + + YN L+ LCK G L+ A LF + P+VV
Sbjct: 506 KTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVV 565
Query: 381 TYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKM 440
+++IMI G G + A L + M + P++ T+ LI F+++ + I KM
Sbjct: 566 SFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKM 625
Query: 441 KEINVMPDASIVSIVV 456
+ PDA I V+
Sbjct: 626 VDSGFEPDAHICDSVL 641
Score = 234 bits (598), Expect = 9e-61, Method: Compositional matrix adjust.
Identities = 146/498 (29%), Positives = 240/498 (48%), Gaps = 43/498 (8%)
Query: 1 MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
M + F VL +LK F + L+KGLC +A +L ++R PDVF+
Sbjct: 120 MRKTGFAFGVLALMLKRGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFS 179
Query: 61 YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
Y T++ G C AL L EM G+G C + VT+ +ID CK G +D+A
Sbjct: 180 YNTVIRGFCEGKELEKALELANEM-KGSG-----CSWSLVTWGILIDAFCKAGKMDEAMG 233
Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
L +MK ++ ++V YTS+IRGFC + + K LF E++++G P +T+N ++ C
Sbjct: 234 FLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFC 293
Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
K G++ EAS + + MI+ GVRP+ +TY L+DG C G+ A +L M +
Sbjct: 294 KLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAV 353
Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
+Y+I+IN CK+ + A+ + M + +PD + +N L GL ++ A KL M
Sbjct: 354 TYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLM 413
Query: 301 QRNG--VAADTWTYRTFIDGLCKN-----------------------------------G 323
++ D +Y I GLCK G
Sbjct: 414 LKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAG 473
Query: 324 YIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYS 383
+ +A+EL+ + K + Y ++IDG CK+G L +A L + L P+V Y+
Sbjct: 474 DVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYN 533
Query: 384 IMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEI 443
++ LC +G +D+A LF +M+ + P+V++F+++I G ++ + LL M
Sbjct: 534 CLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRA 593
Query: 444 NVMPDASIVSIVVDLLAK 461
+ PD S +++ K
Sbjct: 594 GLSPDLFTYSKLINRFLK 611
Score = 183 bits (464), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 124/439 (28%), Positives = 204/439 (46%), Gaps = 44/439 (10%)
Query: 2 GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
G + G + +L+ +P A+T+ +LI+G C ++ EA+ +F + G P+V+TY
Sbjct: 261 GELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTY 320
Query: 62 TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
T L++GLC T AL L M + E PN VTY II+ LCK+G V A E+
Sbjct: 321 TGLIDGLCGVGKTKEALQLLNLMIEKDEE------PNAVTYNIIINKLCKDGLVADAVEI 374
Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQG--VQPNVVTFNVIMDEL 179
+ MK + +P+ +TY ++ G C D +EA +L M+ P+V+++N ++ L
Sbjct: 375 VELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGL 434
Query: 180 CKNGKMDEASRLLDLMIQH---GVR--------------------------------PDA 204
CK ++ +A + DL+++ G R ++
Sbjct: 435 CKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNS 494
Query: 205 FTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSE 264
TY ++DGFC TG +N AK L M + +VF Y+ L++ CK ++ A L+ E
Sbjct: 495 DTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEE 554
Query: 265 MLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGY 324
M PDVV N + G + ++ A L M R G++ D +TY I+ K GY
Sbjct: 555 MQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGY 614
Query: 325 IVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSI 384
+ EA+ F + E D +S++ G + EL + L +V +
Sbjct: 615 LDEAISFFDKMVDSGFEPDAHICDSVLKYCISQGETDKLTELVKKLVDKDIVLDKELTCT 674
Query: 385 MIGGLCN-DGQMDKARDLF 402
++ +CN MD A+ L
Sbjct: 675 VMDYMCNSSANMDLAKRLL 693
Score = 132 bits (332), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 84/290 (28%), Positives = 146/290 (50%)
Query: 173 NVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMES 232
N +M +L ++ + A M++ + + + LL+ + + A + M
Sbjct: 76 NNLMAKLVRSRNHELAFSFYRKMLETDTFINFVSLSGLLECYVQMRKTGFAFGVLALMLK 135
Query: 233 MGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVER 292
G V++++IL+ G C+N E A+SL EM + PDV +NT+ G E ++E+
Sbjct: 136 RGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEK 195
Query: 293 AFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLID 352
A +L +EM+ +G + T+ ID CK G + EA+ ++ + E D+ Y SLI
Sbjct: 196 ALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIR 255
Query: 353 GLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVP 412
G C G L+ LF + P +TY+ +I G C GQ+ +A ++F M E V P
Sbjct: 256 GFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRP 315
Query: 413 NVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKN 462
NV T+ LI G + + + ++LL+ M E + P+A +I+++ L K+
Sbjct: 316 NVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKD 365
>sp|Q9SSR4|PPR77_ARATH Pentatricopeptide repeat-containing protein At1g52620
OS=Arabidopsis thaliana GN=At1g52620 PE=2 SV=1
Length = 819
Score = 233 bits (594), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 144/485 (29%), Positives = 241/485 (49%), Gaps = 46/485 (9%)
Query: 2 GRVSHGF-VVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
G+V G ++ GR K C P+ V + ++I G C I A +F +L++ G P + T
Sbjct: 219 GKVEVGRKLIEGRWGKGCI-PNIVFYNTIIGGYCKLGDIENAYLVFKELKLKGFMPTLET 277
Query: 61 YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVV-------------------------- 94
+ T++NG C+ + + L E+ V
Sbjct: 278 FGTMINGFCKEGDFVASDRLLSEVKERGLRVSVWFLNNIIDAKYRHGYKVDPAESIGWII 337
Query: 95 ---CEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWN 151
C+P+ TY +I+ LCKEG + A L + K + PN ++Y +I+ +C +K+++
Sbjct: 338 ANDCKPDVATYNILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYD 397
Query: 152 EAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLL 211
A +L ++M ++G +P++VT+ +++ L +G MD+A + +I GV PDA YN L+
Sbjct: 398 IASKLLLQMAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLM 457
Query: 212 DGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIK 271
G C TGR AK LF M + Y+ LI+G+ ++ + + A ++S + KG+K
Sbjct: 458 SGLCKTGRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGVK 517
Query: 272 PDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVEL 331
DVV HN + G ++ A + M + D +TY T IDG K + A+++
Sbjct: 518 VDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKI 577
Query: 332 FHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCN 391
F + KC+ ++ Y SLI+G C G ++A E F+ + LVPNVVTY+ +I L
Sbjct: 578 FRYMEKNKCKPNVVTYTSLINGFCCQGDFKMAEETFKEMQLRDLVPNVVTYTTLIRSLAK 637
Query: 392 DGQ-MDKARDLFLDMEENAVVPNVITFDMLIRGFIR------INEP--------SKVIEL 436
+ ++KA + M N VPN +TF+ L++GF++ + EP S E
Sbjct: 638 ESSTLEKAVYYWELMMTNKCVPNEVTFNCLLQGFVKKTSGKVLAEPDGSNHGQSSLFSEF 697
Query: 437 LHKMK 441
H+MK
Sbjct: 698 FHRMK 702
Score = 211 bits (538), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 135/481 (28%), Positives = 228/481 (47%), Gaps = 41/481 (8%)
Query: 21 PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
PD + SL+ L R+ +A ++ ++ G D ++ LV G+C V L
Sbjct: 168 PDVIACNSLLSLLVKSRRLGDARKVYDEMCDRGDSVDNYSTCILVKGMCNEGKVEVGRKL 227
Query: 81 FEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSV 140
E G +G C PN V Y TII G CK G ++ A + ++K K P + T+ ++
Sbjct: 228 IE------GRWGKGCIPNIVFYNTIIGGYCKLGDIENAYLVFKELKLKGFMPTLETFGTM 281
Query: 141 IRGFCYAKDWNEAKRLFIEMMDQGV----------------------------------- 165
I GFC D+ + RL E+ ++G+
Sbjct: 282 INGFCKEGDFVASDRLLSEVKERGLRVSVWFLNNIIDAKYRHGYKVDPAESIGWIIANDC 341
Query: 166 QPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKE 225
+P+V T+N++++ LCK GK + A LD + G+ P+ +Y L+ +C + + A +
Sbjct: 342 KPDVATYNILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASK 401
Query: 226 LFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLF 285
L + M GCK + +Y ILI+G + ++ A+++ +++ +G+ PD I+N L GL
Sbjct: 402 LLLQMAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLC 461
Query: 286 EIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIR 345
+ + A LF EM + D + Y T IDG ++G EA ++F + D+
Sbjct: 462 KTGRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGVKVDVV 521
Query: 346 AYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDM 405
+N++I G C+SG L+ AL + LVP+ TYS +I G M A +F M
Sbjct: 522 HHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRYM 581
Query: 406 EENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEIS 465
E+N PNV+T+ LI GF + E +M+ +++P+ + ++ LAK +
Sbjct: 582 EKNKCKPNVVTYTSLINGFCCQGDFKMAEETFKEMQLRDLVPNVVTYTTLIRSLAKESST 641
Query: 466 L 466
L
Sbjct: 642 L 642
Score = 164 bits (414), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 112/424 (26%), Positives = 197/424 (46%), Gaps = 6/424 (1%)
Query: 56 PDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFV 115
PDV +L++ L ++ A +++EM + + + ++ G+C EG V
Sbjct: 168 PDVIACNSLLSLLVKSRRLGDARKVYDEMCDRGDSV------DNYSTCILVKGMCNEGKV 221
Query: 116 DKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVI 175
+ ++L+ K PN+V Y ++I G+C D A +F E+ +G P + TF +
Sbjct: 222 EVGRKLIEGRWGKGCIPNIVFYNTIIGGYCKLGDIENAYLVFKELKLKGFMPTLETFGTM 281
Query: 176 MDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGC 235
++ CK G + RLL + + G+R + N ++D G E + + C
Sbjct: 282 INGFCKEGDFVASDRLLSEVKERGLRVSVWFLNNIIDAKYRHGYKVDPAESIGWIIANDC 341
Query: 236 KHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFK 295
K V +Y+ILIN CK + E A+ E KG+ P+ + + L + + + A K
Sbjct: 342 KPDVATYNILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASK 401
Query: 296 LFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLC 355
L +M G D TY I GL +G++ +AV + L D YN L+ GLC
Sbjct: 402 LLLQMAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLC 461
Query: 356 KSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVI 415
K+GR A LF + ++P+ Y+ +I G G D+AR +F E V +V+
Sbjct: 462 KTGRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGVKVDVV 521
Query: 416 TFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEISLNSLPSFTVH 475
+ +I+GF R + + +++M E +++PD S ++D K + ++ F
Sbjct: 522 HHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRYM 581
Query: 476 EQQE 479
E+ +
Sbjct: 582 EKNK 585
Score = 144 bits (363), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 89/367 (24%), Positives = 175/367 (47%), Gaps = 5/367 (1%)
Query: 98 NTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLF 157
N ++ + L + ++ +++L ++++N+K + V+ + + ++A ++
Sbjct: 98 NGFACSSFLKLLARYRIFNEIEDVLGNLRNENVKLTHEALSHVLHAYAESGSLSKAVEIY 157
Query: 158 ---IEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGF 214
+E+ D P+V+ N ++ L K+ ++ +A ++ D M G D ++ L+ G
Sbjct: 158 DYVVELYDS--VPDVIACNSLLSLLVKSRRLGDARKVYDEMCDRGDSVDNYSTCILVKGM 215
Query: 215 CLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDV 274
C G+V ++L GC + Y+ +I GYCK +IE A ++ E+ KG P +
Sbjct: 216 CNEGKVEVGRKLIEGRWGKGCIPNIVFYNTIIGGYCKLGDIENAYLVFKELKLKGFMPTL 275
Query: 275 VIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHT 334
T+ G + + +L E++ G+ W ID ++GY V+ E
Sbjct: 276 ETFGTMINGFCKEGDFVASDRLLSEVKERGLRVSVWFLNNIIDAKYRHGYKVDPAESIGW 335
Query: 335 LRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQ 394
+ C+ D+ YN LI+ LCK G+ E+A+ L+PN ++Y+ +I C +
Sbjct: 336 IIANDCKPDVATYNILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKE 395
Query: 395 MDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSI 454
D A L L M E P+++T+ +LI G + + + K+ + V PDA+I ++
Sbjct: 396 YDIASKLLLQMAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNM 455
Query: 455 VVDLLAK 461
++ L K
Sbjct: 456 LMSGLCK 462
Score = 124 bits (312), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 95/337 (28%), Positives = 150/337 (44%), Gaps = 54/337 (16%)
Query: 2 GRVSHGFVVLG----------RILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRV 51
G + HG VV G +++ +PDA + L+ GLC R + A LF+++
Sbjct: 419 GILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLD 478
Query: 52 FGCEPDVFTYTTLVNGLCRTSHTIVALNLFE---------------EMANGNGEFGVVCE 96
PD + Y TL++G R+ A +F M G G++ E
Sbjct: 479 RNILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGVKVDVVHHNAMIKGFCRSGMLDE 538
Query: 97 --------------PNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIR 142
P+ TY+TIIDG K+ + A ++ M+ KPNVVTYTS+I
Sbjct: 539 ALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRYMEKNKCKPNVVTYTSLIN 598
Query: 143 GFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK-NGKMDEASRLLDLMIQHGVR 201
GFC D+ A+ F EM + + PNVVT+ ++ L K + +++A +LM+ +
Sbjct: 599 GFCCQGDFKMAEETFKEMQLRDLVPNVVTYTTLIRSLAKESSTLEKAVYYWELMMTNKCV 658
Query: 202 PDAFTYNTLLDGFC--LTGRV-------NHAK-----ELFVSMESMGCKHTVFSYSILIN 247
P+ T+N LL GF +G+V NH + E F M+S G +Y+ +
Sbjct: 659 PNEVTFNCLLQGFVKKTSGKVLAEPDGSNHGQSSLFSEFFHRMKSDGWSDHAAAYNSALV 718
Query: 248 GYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGL 284
C + ++ A +M+ KG PD V + G
Sbjct: 719 CLCVHGMVKTACMFQDKMVKKGFSPDPVSFAAILHGF 755
Score = 100 bits (249), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 75/299 (25%), Positives = 122/299 (40%), Gaps = 58/299 (19%)
Query: 22 DAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLF 81
D V ++IKG C + EA A ++ PD FTY+T+++G + A+ +F
Sbjct: 519 DVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIF 578
Query: 82 EEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVI 141
M C+PN VTYT++I+G C +G A+E +M+ +++ PNVVTYT++I
Sbjct: 579 RYMEKNK------CKPNVVTYTSLINGFCCQGDFKMAEETFKEMQLRDLVPNVVTYTTLI 632
Query: 142 RGFCYAKDWNEAKRLFIE-MMDQGVQPNVVTFNVIMDE---------------------- 178
R E + E MM PN VTFN ++
Sbjct: 633 RSLAKESSTLEKAVYYWELMMTNKCVPNEVTFNCLLQGFVKKTSGKVLAEPDGSNHGQSS 692
Query: 179 ---------------------------LCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLL 211
LC +G + A D M++ G PD ++ +L
Sbjct: 693 LFSEFFHRMKSDGWSDHAAAYNSALVCLCVHGMVKTACMFQDKMVKKGFSPDPVSFAAIL 752
Query: 212 DGFCLTGRVNHAKEL-FVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKG 269
GFC+ G + + F ++ G + V YS ++ + I A ++ M+ K
Sbjct: 753 HGFCVVGNSKQWRNMDFCNLGEKGLEVAV-RYSQVLEQHLPQPVICEASTILHAMVEKA 810
>sp|Q9FJE6|PP437_ARATH Putative pentatricopeptide repeat-containing protein At5g59900
OS=Arabidopsis thaliana GN=At5g59900 PE=3 SV=1
Length = 907
Score = 231 bits (589), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 143/512 (27%), Positives = 242/512 (47%), Gaps = 66/512 (12%)
Query: 2 GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
G++ ++ R++ +P+ + +LI LC + EA LF ++ G P+ TY
Sbjct: 346 GKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTY 405
Query: 62 TTLVNGLCRTSHTIVALNLFEEMA---------------NGNGEFGVVC----------- 95
+ L++ CR AL+ EM NG+ +FG +
Sbjct: 406 SILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMIN 465
Query: 96 ---EPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNE 152
EP VTYT+++ G C +G ++KA L +M K I P++ T+T+++ G A +
Sbjct: 466 KKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRD 525
Query: 153 AKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLD 212
A +LF EM + V+PN VT+NV+++ C+ G M +A L M + G+ PD ++Y L+
Sbjct: 526 AVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIH 585
Query: 213 GFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKP 272
G CLTG+ + AK + C+ Y+ L++G+C+ ++E ALS+ EM+ +G+
Sbjct: 586 GLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDL 645
Query: 273 DVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELF 332
D+V + L G + + F L EM G+ D Y + ID K G EA ++
Sbjct: 646 DLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIW 705
Query: 333 HTLRILKCEFDIRAYNSLIDGLCKSG---------------------------------- 358
+ C + Y ++I+GLCK+G
Sbjct: 706 DLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKG 765
Query: 359 --RLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVIT 416
++ A+EL ++ G+L N TY+++I G C G++++A +L M + V P+ IT
Sbjct: 766 EVDMQKAVELHNAILKGLLA-NTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCIT 824
Query: 417 FDMLIRGFIRINEPSKVIELLHKMKEINVMPD 448
+ +I R N+ K IEL + M E + PD
Sbjct: 825 YTTMINELCRRNDVKKAIELWNSMTEKGIRPD 856
Score = 214 bits (546), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 130/449 (28%), Positives = 213/449 (47%), Gaps = 6/449 (1%)
Query: 19 FTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVAL 78
F+P +SL++GL +I EA L ++ FG P++F Y L++ LC+ A
Sbjct: 328 FSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAE 387
Query: 79 NLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYT 138
LF+ M G+ G+ PN VTY+ +ID C+ G +D A L +M D +K +V Y
Sbjct: 388 LLFDRM----GKIGL--RPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYN 441
Query: 139 SVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQH 198
S+I G C D + A+ EM+++ ++P VVT+ +M C GK+++A RL M
Sbjct: 442 SLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGK 501
Query: 199 GVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGA 258
G+ P +T+ TLL G G + A +LF M K +Y+++I GYC+ ++ A
Sbjct: 502 GIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKA 561
Query: 259 LSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDG 318
EM KGI PD + L GL Q A D + + + Y + G
Sbjct: 562 FEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHG 621
Query: 319 LCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPN 378
C+ G + EA+ + + + D+ Y LIDG K ++ L + + L P+
Sbjct: 622 FCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPD 681
Query: 379 VVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLH 438
V Y+ MI G +A ++ M VPN +T+ +I G + ++ L
Sbjct: 682 DVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCS 741
Query: 439 KMKEINVMPDASIVSIVVDLLAKNEISLN 467
KM+ ++ +P+ +D+L K E+ +
Sbjct: 742 KMQPVSSVPNQVTYGCFLDILTKGEVDMQ 770
Score = 194 bits (492), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 136/485 (28%), Positives = 220/485 (45%), Gaps = 60/485 (12%)
Query: 3 RVSHGFVVLGR-ILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
RV G +V I K P+ T ++L+ GL A LF + G PDV+ Y
Sbjct: 171 RVLDGVLVFKMMITKVSLLPEVRTLSALLHGLVKFRHFGLAMELFNDMVSVGIRPDVYIY 230
Query: 62 TTLVNGLCRTSHTIVALNLFEEM-ANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
T ++ LC A + M A G C+ N V Y +IDGLCK+ V +A
Sbjct: 231 TGVIRSLCELKDLSRAKEMIAHMEATG-------CDVNIVPYNVLIDGLCKKQKVWEAVG 283
Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
+ + K++KP+VVTY +++ G C +++ + EM+ P+ + +++ L
Sbjct: 284 IKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLR 343
Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
K GK++EA L+ ++ GV P+ F YN L+D C + + A+ LF M +G +
Sbjct: 344 KRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDV 403
Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
+YSILI+ +C+ +++ ALS EM+ G+K V
Sbjct: 404 TYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSV-------------------------- 437
Query: 301 QRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRL 360
+ Y + I+G CK G I A + K E + Y SL+ G C G++
Sbjct: 438 ---------YPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKI 488
Query: 361 EIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDML 420
AL L+ + + P++ T++ ++ GL G + A LF +M E V PN +T++++
Sbjct: 489 NKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVM 548
Query: 421 IRGFIRINEPSKVIELLHKMKEINVMPD----------------ASIVSIVVDLLAKNEI 464
I G+ + SK E L +M E ++PD AS + VD L K
Sbjct: 549 IEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNC 608
Query: 465 SLNSL 469
LN +
Sbjct: 609 ELNEI 613
Score = 155 bits (391), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 105/343 (30%), Positives = 160/343 (46%), Gaps = 31/343 (9%)
Query: 2 GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
G +S F L + + PD ++ LI GLC + EA L CE + Y
Sbjct: 556 GDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICY 615
Query: 62 TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVC-------------------------- 95
T L++G CR AL++ +EM + +VC
Sbjct: 616 TGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHD 675
Query: 96 ---EPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNE 152
+P+ V YT++ID K G +A + M ++ PN VTYT+VI G C A NE
Sbjct: 676 RGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNE 735
Query: 153 AKRLFIEMMDQGVQPNVVTFNVIMDELCKNG-KMDEASRLLDLMIQHGVRPDAFTYNTLL 211
A+ L +M PN VT+ +D L K M +A L + +++ G+ + TYN L+
Sbjct: 736 AEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVELHNAILK-GLLANTATYNMLI 794
Query: 212 DGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIK 271
GFC GR+ A EL M G +Y+ +IN C+ +++ A+ L++ M KGI+
Sbjct: 795 RGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSMTEKGIR 854
Query: 272 PDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRT 314
PD V +NTL G ++ +A +L +EM R G+ + T RT
Sbjct: 855 PDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLIPNNKTSRT 897
Score = 68.9 bits (167), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 58/283 (20%), Positives = 113/283 (39%), Gaps = 53/283 (18%)
Query: 234 GCKHTVFSYSILING--------------------------------------------- 248
G H+ S+ ILI+
Sbjct: 99 GFDHSTASFCILIHALVKANLFWPASSLLQTLLLRALKPSDVFNVLFSCYEKCKLSSSSS 158
Query: 249 -------YCKNKEIEGALSLYSEMLSK-GIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
Y +++ + + ++ M++K + P+V + L GL + A +LF++M
Sbjct: 159 FDLLIQHYVRSRRVLDGVLVFKMMITKVSLLPEVRTLSALLHGLVKFRHFGLAMELFNDM 218
Query: 301 QRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRL 360
G+ D + Y I LC+ + A E+ + C+ +I YN LIDGLCK ++
Sbjct: 219 VSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQKV 278
Query: 361 EIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDML 420
A+ + + L L P+VVTY ++ GLC + + ++ +M P+ L
Sbjct: 279 WEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSL 338
Query: 421 IRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNE 463
+ G + + + + L+ ++ + V P+ + + ++D L K
Sbjct: 339 VEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGR 381
>sp|Q9FMQ1|PP376_ARATH Pentatricopeptide repeat-containing protein At5g12100,
mitochondrial OS=Arabidopsis thaliana GN=At5g12100 PE=2
SV=1
Length = 816
Score = 230 bits (586), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 132/463 (28%), Positives = 231/463 (49%), Gaps = 6/463 (1%)
Query: 4 VSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTT 63
V G + R+ P + LI GLC R+ +A LF ++ P + TY T
Sbjct: 195 VGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNT 254
Query: 64 LVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLL 123
L++G C+ + + + E M + EP+ +T+ T++ GL K G V+ A+ +L
Sbjct: 255 LIDGYCKAGNPEKSFKVRERMKADH------IEPSLITFNTLLKGLFKAGMVEDAENVLK 308
Query: 124 QMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNG 183
+MKD P+ T++ + G+ + A ++ +D GV+ N T +++++ LCK G
Sbjct: 309 EMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEG 368
Query: 184 KMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYS 243
K+++A +L + G+ P+ YNT++DG+C G + A+ +ME G K +Y+
Sbjct: 369 KIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYN 428
Query: 244 ILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRN 303
LI +C+ E+E A ++M KG+ P V +N L G ++ ++ F + EM+ N
Sbjct: 429 CLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDN 488
Query: 304 GVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIA 363
G + +Y T I+ LCK ++EA + + +R YN LIDG C G++E A
Sbjct: 489 GTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDA 548
Query: 364 LELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRG 423
+ + + N+VTY+ +I GL G++ +A DL L++ + P+V T++ LI G
Sbjct: 549 FRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISG 608
Query: 424 FIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEISL 466
+ + I L +MK + P +++ L K I L
Sbjct: 609 YGFAGNVQRCIALYEEMKRSGIKPTLKTYHLLISLCTKEGIEL 651
Score = 195 bits (495), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 136/488 (27%), Positives = 232/488 (47%), Gaps = 41/488 (8%)
Query: 2 GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
G F V R+ P +TF +L+KGL + +A + +++ G PD FT+
Sbjct: 263 GNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTF 322
Query: 62 TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
+ L +G AL ++E + GV + N T + +++ LCKEG ++KA+E+
Sbjct: 323 SILFDGYSSNEKAEAALGVYETAVDS----GV--KMNAYTCSILLNALCKEGKIEKAEEI 376
Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMD-QGVQPNVVTFNVIMDELC 180
L + K + PN V Y ++I G+C D A R+ IE M+ QG++P+ + +N ++ C
Sbjct: 377 LGREMAKGLVPNEVIYNTMIDGYCRKGDLVGA-RMKIEAMEKQGMKPDHLAYNCLIRRFC 435
Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
+ G+M+ A + ++ M GV P TYN L+ G+ + ++ ME G V
Sbjct: 436 ELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVV 495
Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
SY LIN CK ++ A + +M +G+ P V I+N L G ++E AF+ EM
Sbjct: 496 SYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEM 555
Query: 301 QRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRL 360
+ G+ + TY T IDGL G + EA +L + + D+ YNSLI G +G +
Sbjct: 556 LKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNV 615
Query: 361 EIALELFRSLPCGVLVPNVVTYSIMIGGLCND---------------------------- 392
+ + L+ + + P + TY ++I LC
Sbjct: 616 QRCIALYEEMKRSGIKPTLKTYHLLI-SLCTKEGIELTERLFGEMSLKPDLLVYNGVLHC 674
Query: 393 ----GQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPD 448
G M+KA +L M E ++ + T++ LI G +++ + +V L+ +M + P+
Sbjct: 675 YAVHGDMEKAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMNAREMEPE 734
Query: 449 ASIVSIVV 456
A +I+V
Sbjct: 735 ADTYNIIV 742
Score = 194 bits (494), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 138/477 (28%), Positives = 229/477 (48%), Gaps = 31/477 (6%)
Query: 3 RVSHGFVVLGRILKSCFTP--------DAVTFTS----------LIKGLCAESR-IMEAA 43
R+ VL +L+S TP A + +S L+ L ES+ I EAA
Sbjct: 70 RIETARGVLSSLLRSDSTPFASPKELFSAFSLSSPSLKHDFSYLLLSVLLNESKMISEAA 129
Query: 44 ALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYT 103
LF LR G P + T L++ L +T V +N+F + + P+ Y
Sbjct: 130 DLFFALRNEGIYPSSDSLTLLLDHLVKTKQFRVTINVFLNILESD------FRPSKFMYG 183
Query: 104 TIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQ 163
I K V K EL +MK I P+V Y +I G C K N+A++LF EM+ +
Sbjct: 184 KAIQAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLAR 243
Query: 164 GVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHA 223
+ P+++T+N ++D CK G +++ ++ + M + P T+NTLL G G V A
Sbjct: 244 RLLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDA 303
Query: 224 KELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVG 283
+ + M+ +G F++SIL +GY N++ E AL +Y + G+K + + L
Sbjct: 304 ENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNA 363
Query: 284 LFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFD 343
L + ++E+A ++ G+ + Y T IDG C+ G +V A + + D
Sbjct: 364 LCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPD 423
Query: 344 IRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFL 403
AYN LI C+ G +E A + + + P+V TY+I+IGG + DK D+
Sbjct: 424 HLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILK 483
Query: 404 DMEENAVVPNVITFDMLIRGFIRINEPSKVIE---LLHKMKEINVMPDASIVSIVVD 457
+ME+N +PNV+++ LI + SK++E + M++ V P I ++++D
Sbjct: 484 EMEDNGTMPNVVSYGTLINCLCK---GSKLLEAQIVKRDMEDRGVSPKVRIYNMLID 537
Score = 174 bits (441), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 117/427 (27%), Positives = 199/427 (46%), Gaps = 18/427 (4%)
Query: 2 GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
G++ +LGR + P+ V + ++I G C + ++ A + G +PD Y
Sbjct: 368 GKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAY 427
Query: 62 TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVV----CEPNTVTYTTIIDGLCKEGFVDK 117
L+ C EM N E + P+ TY +I G ++ DK
Sbjct: 428 NCLIRRFCELG----------EMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDK 477
Query: 118 AKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMD 177
++L +M+D PNVV+Y ++I C EA+ + +M D+GV P V +N+++D
Sbjct: 478 CFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLID 537
Query: 178 ELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKH 237
C GK+++A R M++ G+ + TYNTL+DG +TG+++ A++L + + G K
Sbjct: 538 GCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKP 597
Query: 238 TVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLF 297
VF+Y+ LI+GY ++ ++LY EM GIKP + ++ L + L +E +LF
Sbjct: 598 DVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPTLKTYH-LLISLCTKEGIELTERLF 656
Query: 298 DEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKS 357
EM + D Y + +G + +A L + D YNSLI G K
Sbjct: 657 GEMS---LKPDLLVYNGVLHCYAVHGDMEKAFNLQKQMIEKSIGLDKTTYNSLILGQLKV 713
Query: 358 GRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITF 417
G+L L + + P TY+I++ G C A + +M+E + +V
Sbjct: 714 GKLCEVRSLIDEMNAREMEPEADTYNIIVKGHCEVKDYMSAYVWYREMQEKGFLLDVCIG 773
Query: 418 DMLIRGF 424
+ L+ G
Sbjct: 774 NELVSGL 780
Score = 149 bits (377), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 102/375 (27%), Positives = 171/375 (45%), Gaps = 37/375 (9%)
Query: 16 KSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTI 75
K PD + + LI+ C + A K+++ G P V TY L+ G R
Sbjct: 417 KQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFD 476
Query: 76 VALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVV 135
++ +EM + NG PN V+Y T+I+ LCK + +A+ + M+D+ + P V
Sbjct: 477 KCFDILKEMED-NGTM-----PNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVR 530
Query: 136 TYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLM 195
Y +I G C +A R EM+ +G++ N+VT+N ++D L GK+ EA LL +
Sbjct: 531 IYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEI 590
Query: 196 IQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILI--------- 246
+ G++PD FTYN+L+ G+ G V L+ M+ G K T+ +Y +LI
Sbjct: 591 SRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPTLKTYHLLISLCTKEGIE 650
Query: 247 ------------------NG----YCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGL 284
NG Y + ++E A +L +M+ K I D +N+L +G
Sbjct: 651 LTERLFGEMSLKPDLLVYNGVLHCYAVHGDMEKAFNLQKQMIEKSIGLDKTTYNSLILGQ 710
Query: 285 FEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDI 344
++ ++ L DEM + + TY + G C+ + A + ++ D+
Sbjct: 711 LKVGKLCEVRSLIDEMNAREMEPEADTYNIIVKGHCEVKDYMSAYVWYREMQEKGFLLDV 770
Query: 345 RAYNSLIDGLCKSGR 359
N L+ GL + R
Sbjct: 771 CIGNELVSGLKEEWR 785
Score = 127 bits (320), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 91/325 (28%), Positives = 150/325 (46%), Gaps = 39/325 (12%)
Query: 8 FVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNG 67
F +L + + P+ V++ +LI LC S+++EA + + G P V Y L++G
Sbjct: 479 FDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDG 538
Query: 68 LCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKD 127
C A +EM E N VTY T+IDGL G + +A++LLL++
Sbjct: 539 CCSKGKIEDAFRFSKEMLKKGIEL------NLVTYNTLIDGLSMTGKLSEAEDLLLEISR 592
Query: 128 KNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK------ 181
K +KP+V TY S+I G+ +A + L+ EM G++P + T+++++ LC
Sbjct: 593 KGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPTLKTYHLLIS-LCTKEGIEL 651
Query: 182 --------------------------NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFC 215
+G M++A L MI+ + D TYN+L+ G
Sbjct: 652 TERLFGEMSLKPDLLVYNGVLHCYAVHGDMEKAFNLQKQMIEKSIGLDKTTYNSLILGQL 711
Query: 216 LTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVV 275
G++ + L M + + +Y+I++ G+C+ K+ A Y EM KG DV
Sbjct: 712 KVGKLCEVRSLIDEMNAREMEPEADTYNIIVKGHCEVKDYMSAYVWYREMQEKGFLLDVC 771
Query: 276 IHNTLFVGLFEIHQVERAFKLFDEM 300
I N L GL E + + A + EM
Sbjct: 772 IGNELVSGLKEEWRSKEAEIVISEM 796
Score = 96.7 bits (239), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 71/245 (28%), Positives = 121/245 (49%), Gaps = 9/245 (3%)
Query: 224 KELF--VSMESMGCKHTVFSY---SILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHN 278
KELF S+ S KH FSY S+L+N ++K I A L+ + ++GI P
Sbjct: 93 KELFSAFSLSSPSLKHD-FSYLLLSVLLN---ESKMISEAADLFFALRNEGIYPSSDSLT 148
Query: 279 TLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRIL 338
L L + Q +F + + + Y I K + + +ELF+ ++
Sbjct: 149 LLLDHLVKTKQFRVTINVFLNILESDFRPSKFMYGKAIQAAVKLSDVGKGLELFNRMKHD 208
Query: 339 KCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKA 398
+ + YN LIDGLCK R+ A +LF + L+P+++TY+ +I G C G +K+
Sbjct: 209 RIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNTLIDGYCKAGNPEKS 268
Query: 399 RDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDL 458
+ M+ + + P++ITF+ L++G + +L +MK++ +PDA SI+ D
Sbjct: 269 FKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDG 328
Query: 459 LAKNE 463
+ NE
Sbjct: 329 YSSNE 333
Score = 96.3 bits (238), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 53/242 (21%), Positives = 120/242 (49%)
Query: 220 VNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNT 279
++ A +LF ++ + G + S ++L++ K K+ ++++ +L +P ++
Sbjct: 125 ISEAADLFFALRNEGIYPSSDSLTLLLDHLVKTKQFRVTINVFLNILESDFRPSKFMYGK 184
Query: 280 LFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILK 339
++ V + +LF+ M+ + + + Y IDGLCK + +A +LF + +
Sbjct: 185 AIQAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARR 244
Query: 340 CEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKAR 399
+ YN+LIDG CK+G E + ++ + + P+++T++ ++ GL G ++ A
Sbjct: 245 LLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAE 304
Query: 400 DLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLL 459
++ +M++ VP+ TF +L G+ + + + + V +A SI+++ L
Sbjct: 305 NVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNAL 364
Query: 460 AK 461
K
Sbjct: 365 CK 366
>sp|Q9LSL9|PP445_ARATH Pentatricopeptide repeat-containing protein At5g65560
OS=Arabidopsis thaliana GN=At5g65560 PE=2 SV=1
Length = 915
Score = 228 bits (582), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 145/495 (29%), Positives = 241/495 (48%), Gaps = 43/495 (8%)
Query: 1 MGRVSHGFVVLGRILKSCFTPDAVTFTSL------------------------------- 29
+G V + +I+++ PD T+TSL
Sbjct: 231 LGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVA 290
Query: 30 ----IKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEEMA 85
I GLC RI EA LF K++ C P V TYT L+ LC + ALNL +EM
Sbjct: 291 YTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEME 350
Query: 86 NGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFC 145
E G+ +PN TYT +ID LC + +KA+ELL QM +K + PNV+TY ++I G+C
Sbjct: 351 ----ETGI--KPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYC 404
Query: 146 YAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAF 205
+A + M + + PN T+N ++ CK+ + +A +L+ M++ V PD
Sbjct: 405 KRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKSN-VHKAMGVLNKMLERKVLPDVV 463
Query: 206 TYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEM 265
TYN+L+DG C +G + A L M G ++Y+ +I+ CK+K +E A L+ +
Sbjct: 464 TYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSL 523
Query: 266 LSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYI 325
KG+ P+VV++ L G + +V+ A + ++M ++ T+ I GLC +G +
Sbjct: 524 EQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKL 583
Query: 326 VEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIM 385
EA L + + + + LI L K G + A F+ + P+ TY+
Sbjct: 584 KEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTF 643
Query: 386 IGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINV 445
I C +G++ A D+ M EN V P++ T+ LI+G+ + + + ++L +M++
Sbjct: 644 IQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGC 703
Query: 446 MPDA-SIVSIVVDLL 459
P + +S++ LL
Sbjct: 704 EPSQHTFLSLIKHLL 718
Score = 218 bits (556), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 133/407 (32%), Positives = 208/407 (51%), Gaps = 7/407 (1%)
Query: 56 PDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFV 115
P+++TY +VNG C+ + A ++ E G+ +P+ TYT++I G C+ +
Sbjct: 216 PNIYTYNKMVNGYCKLGNVEEANQYVSKIV----EAGL--DPDFFTYTSLIMGYCQRKDL 269
Query: 116 DKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVI 175
D A ++ +M K + N V YT +I G C A+ +EA LF++M D P V T+ V+
Sbjct: 270 DSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVL 329
Query: 176 MDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGC 235
+ LC + + EA L+ M + G++P+ TY L+D C + A+EL M G
Sbjct: 330 IKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGL 389
Query: 236 KHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFK 295
V +Y+ LINGYCK IE A+ + M S+ + P+ +N L G + V +A
Sbjct: 390 MPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCK-SNVHKAMG 448
Query: 296 LFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLC 355
+ ++M V D TY + IDG C++G A L + D Y S+ID LC
Sbjct: 449 VLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLC 508
Query: 356 KSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVI 415
KS R+E A +LF SL + PNVV Y+ +I G C G++D+A + M +PN +
Sbjct: 509 KSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSL 568
Query: 416 TFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKN 462
TF+ LI G + + L KM +I + P S +I++ L K+
Sbjct: 569 TFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKD 615
Score = 201 bits (512), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 125/443 (28%), Positives = 217/443 (48%), Gaps = 25/443 (5%)
Query: 3 RVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYT 62
R S ++ + ++ P+ T+T LI LC++ + +A L ++ G P+V TY
Sbjct: 338 RKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYN 397
Query: 63 TLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELL 122
L+NG C+ A+++ E M + PNT TY +I G CK V KA +L
Sbjct: 398 ALINGYCKRGMIEDAVDVVELMESRK------LSPNTRTYNELIKGYCKSN-VHKAMGVL 450
Query: 123 LQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKN 182
+M ++ + P+VVTY S+I G C + +++ A RL M D+G+ P+ T+ ++D LCK+
Sbjct: 451 NKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKS 510
Query: 183 GKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSY 242
+++EA L D + Q GV P+ Y L+DG+C G+V+ A + M S C ++
Sbjct: 511 KRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTF 570
Query: 243 SILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQR 302
+ LI+G C + +++ A L +M+ G++P V L L + + A+ F +M
Sbjct: 571 NALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLS 630
Query: 303 NGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEI 362
+G D TY TFI C+ G +++A ++ +R D+ Y+SLI G G+
Sbjct: 631 SGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNF 690
Query: 363 ALELFRSLPCGVLVPNVVTYSIMIG------------------GLCNDGQMDKARDLFLD 404
A ++ + + P+ T+ +I + N + D +L
Sbjct: 691 AFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFDTVVELLEK 750
Query: 405 MEENAVVPNVITFDMLIRGFIRI 427
M E++V PN +++ LI G +
Sbjct: 751 MVEHSVTPNAKSYEKLILGICEV 773
Score = 186 bits (471), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 100/356 (28%), Positives = 184/356 (51%), Gaps = 1/356 (0%)
Query: 102 YTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMM 161
Y T+++ L + G VD+ K++ ++M + + PN+ TY ++ G+C + EA + +++
Sbjct: 186 YNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIV 245
Query: 162 DQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVN 221
+ G+ P+ T+ ++ C+ +D A ++ + M G R + Y L+ G C+ R++
Sbjct: 246 EAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRID 305
Query: 222 HAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLF 281
A +LFV M+ C TV +Y++LI C ++ AL+L EM GIKP++ + L
Sbjct: 306 EAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLI 365
Query: 282 VGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCE 341
L + E+A +L +M G+ + TY I+G CK G I +AV++ + K
Sbjct: 366 DSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLS 425
Query: 342 FDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDL 401
+ R YN LI G CKS + A+ + + ++P+VVTY+ +I G C G D A L
Sbjct: 426 PNTRTYNELIKGYCKSN-VHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRL 484
Query: 402 FLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVD 457
M + +VP+ T+ +I + + +L +++ V P+ + + ++D
Sbjct: 485 LSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALID 540
Score = 183 bits (465), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 133/475 (28%), Positives = 212/475 (44%), Gaps = 62/475 (13%)
Query: 4 VSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTT 63
V VL ++L+ PD VT+ SLI G C A L + + G PD +TYT+
Sbjct: 443 VHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTS 502
Query: 64 LVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLL 123
+++ LC++ A +LF+ + + GV PN V YT +IDG CK G VD+A +L
Sbjct: 503 MIDSLCKSKRVEEACDLFDSLE----QKGV--NPNVVMYTALIDGYCKAGKVDEAHLMLE 556
Query: 124 QMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNG 183
+M KN PN +T+ ++I G C EA L +M+ G+QP V T +++ L K+G
Sbjct: 557 KMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDG 616
Query: 184 KMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYS 243
D A M+ G +PDA TY T + +C GR+ A+++ M G +F+YS
Sbjct: 617 DFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYS 676
Query: 244 ILING----------------------------------------YCKNK---------- 253
LI G Y K K
Sbjct: 677 SLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMS 736
Query: 254 ---EIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRN-GVAADT 309
E + + L +M+ + P+ + L +G+ E+ + A K+FD MQRN G++
Sbjct: 737 NMMEFDTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSE 796
Query: 310 WTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRS 369
+ + CK EA ++ + + + + LI GL K G E +F++
Sbjct: 797 LVFNALLSCCCKLKKHNEAAKVVDDMICVGHLPQLESCKVLICGLYKKGEKERGTSVFQN 856
Query: 370 L-PCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRG 423
L CG + + + I+I G+ G ++ +LF ME+N + T+ +LI G
Sbjct: 857 LLQCGY-YEDELAWKIIIDGVGKQGLVEAFYELFNVMEKNGCKFSSQTYSLLIEG 910
Score = 157 bits (398), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 103/371 (27%), Positives = 185/371 (49%), Gaps = 25/371 (6%)
Query: 2 GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
G+V ++L ++L P+++TF +LI GLCA+ ++ EA L K+ G +P V T
Sbjct: 546 GKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTD 605
Query: 62 TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
T L++ L + A + F++M + + P+ TYTT I C+EG + A+++
Sbjct: 606 TILIHRLLKDGDFDHAYSRFQQMLSSGTK------PDAHTYTTFIQTYCREGRLLDAEDM 659
Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMD---- 177
+ +M++ + P++ TY+S+I+G+ N A + M D G +P+ TF ++
Sbjct: 660 MAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLE 719
Query: 178 -----------ELCKNGKM---DEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHA 223
ELC M D LL+ M++H V P+A +Y L+ G C G + A
Sbjct: 720 MKYGKQKGSEPELCAMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVA 779
Query: 224 KELFVSME-SMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFV 282
+++F M+ + G + ++ L++ CK K+ A + +M+ G P + L
Sbjct: 780 EKVFDHMQRNEGISPSELVFNALLSCCCKLKKHNEAAKVVDDMICVGHLPQLESCKVLIC 839
Query: 283 GLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEF 342
GL++ + ER +F + + G D ++ IDG+ K G + ELF+ + C+F
Sbjct: 840 GLYKKGEKERGTSVFQNLLQCGYYEDELAWKIIIDGVGKQGLVEAFYELFNVMEKNGCKF 899
Query: 343 DIRAYNSLIDG 353
+ Y+ LI+G
Sbjct: 900 SSQTYSLLIEG 910
>sp|O04504|PPR27_ARATH Pentatricopeptide repeat-containing protein At1g09820
OS=Arabidopsis thaliana GN=At1g09820 PE=2 SV=1
Length = 606
Score = 228 bits (580), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 135/432 (31%), Positives = 230/432 (53%), Gaps = 16/432 (3%)
Query: 3 RVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYT 62
R GF R + A++ L+ L E+R + ++ ++ +P+VFT+
Sbjct: 168 RFELGFEAFKRSGYYGYKLSALSCKPLMIALLKENRSADVEYVYKEMIRRKIQPNVFTFN 227
Query: 63 TLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCK---EGFVDKAK 119
++N LC+T A ++ E+M +G C PN V+Y T+IDG CK G + KA
Sbjct: 228 VVINALCKTGKMNKARDVMEDMK----VYG--CSPNVVSYNTLIDGYCKLGGNGKMYKAD 281
Query: 120 ELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDEL 179
+L +M + ++ PN+ T+ +I GF + + ++F EM+DQ V+PNV+++N +++ L
Sbjct: 282 AVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGL 341
Query: 180 CKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTV 239
C GK+ EA + D M+ GV+P+ TYN L++GFC + A ++F S++ G T
Sbjct: 342 CNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTT 401
Query: 240 FSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDE 299
Y++LI+ YCK +I+ +L EM +GI PDV +N L GL +E A KLFD+
Sbjct: 402 RMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQ 461
Query: 300 MQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGR 359
+ G+ D T+ ++G C+ G +A L + + + YN ++ G CK G
Sbjct: 462 LTSKGL-PDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYCKEGN 520
Query: 360 LEIALELFRSLPC-GVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITF- 417
L+ A + + L NV +Y++++ G G+++ A L +M E +VPN IT+
Sbjct: 521 LKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKGLVPNRITYE 580
Query: 418 ----DMLIRGFI 425
+M+ +GF+
Sbjct: 581 IVKEEMVDQGFV 592
Score = 176 bits (447), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 101/322 (31%), Positives = 170/322 (52%), Gaps = 4/322 (1%)
Query: 108 GLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQP 167
L KE + + +M + I+PNV T+ VI C N+A+ + +M G P
Sbjct: 197 ALLKENRSADVEYVYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSP 256
Query: 168 NVVTFNVIMDELCK---NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAK 224
NVV++N ++D CK NGKM +A +L M+++ V P+ T+N L+DGF + +
Sbjct: 257 NVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSM 316
Query: 225 ELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGL 284
++F M K V SY+ LING C +I A+S+ +M+S G++P+++ +N L G
Sbjct: 317 KVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGF 376
Query: 285 FEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDI 344
+ ++ A +F ++ G T Y ID CK G I + L + D+
Sbjct: 377 CKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDV 436
Query: 345 RAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLD 404
YN LI GLC++G +E A +LF L L P++VT+ I++ G C G+ KA L +
Sbjct: 437 GTYNCLIAGLCRNGNIEAAKKLFDQLTSKGL-PDLVTFHILMEGYCRKGESRKAAMLLKE 495
Query: 405 MEENAVVPNVITFDMLIRGFIR 426
M + + P +T++++++G+ +
Sbjct: 496 MSKMGLKPRHLTYNIVMKGYCK 517
Score = 153 bits (387), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 86/325 (26%), Positives = 167/325 (51%), Gaps = 8/325 (2%)
Query: 2 GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
G++ VL ++++ +P+ TF LI G + + + +F ++ +P+V +Y
Sbjct: 275 GKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISY 334
Query: 62 TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
+L+NGLC A+++ ++M + GV +PN +TY +I+G CK + +A ++
Sbjct: 335 NSLINGLCNGGKISEAISMRDKMVSA----GV--QPNLITYNALINGFCKNDMLKEALDM 388
Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
+K + P Y +I +C ++ L EM +G+ P+V T+N ++ LC+
Sbjct: 389 FGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCR 448
Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
NG ++ A +L D + G+ PD T++ L++G+C G A L M MG K +
Sbjct: 449 NGNIEAAKKLFDQLTSKGL-PDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLT 507
Query: 242 YSILINGYCKNKEIEGALSLYSEM-LSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
Y+I++ GYCK ++ A ++ ++M + ++ +V +N L G + ++E A L +EM
Sbjct: 508 YNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEM 567
Query: 301 QRNGVAADTWTYRTFIDGLCKNGYI 325
G+ + TY + + G++
Sbjct: 568 LEKGLVPNRITYEIVKEEMVDQGFV 592
Score = 149 bits (376), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 90/331 (27%), Positives = 167/331 (50%), Gaps = 39/331 (11%)
Query: 164 GVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHA 223
G + + ++ +M L K + + + MI+ ++P+ FT+N +++ C TG++N A
Sbjct: 183 GYKLSALSCKPLMIALLKENRSADVEYVYKEMIRRKIQPNVFTFNVVINALCKTGKMNKA 242
Query: 224 KELFVSMESMGCKHTVFSYSILINGYCK---NKEIEGALSLYSEMLSKGIKPDVVIHNTL 280
+++ M+ GC V SY+ LI+GYCK N ++ A ++ EM+ + P++ N L
Sbjct: 243 RDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNIL 302
Query: 281 FVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKC 340
G ++ + + K+F EM V + +Y + I+GLC G I EA+ + +
Sbjct: 303 IDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGV 362
Query: 341 EFDIRAYNSLIDGLCKSGRLEIALELFRSLP------------------CGV-------- 374
+ ++ YN+LI+G CK+ L+ AL++F S+ C +
Sbjct: 363 QPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFA 422
Query: 375 ---------LVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFI 425
+VP+V TY+ +I GLC +G ++ A+ LF D + +P+++TF +L+ G+
Sbjct: 423 LKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLF-DQLTSKGLPDLVTFHILMEGYC 481
Query: 426 RINEPSKVIELLHKMKEINVMPDASIVSIVV 456
R E K LL +M ++ + P +IV+
Sbjct: 482 RKGESRKAAMLLKEMSKMGLKPRHLTYNIVM 512
Score = 117 bits (294), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 75/277 (27%), Positives = 131/277 (47%), Gaps = 24/277 (8%)
Query: 2 GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
G++S + +++ + P+ +T+ +LI G C + EA +F ++ G P Y
Sbjct: 345 GKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMY 404
Query: 62 TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
L++ C+ L EEM G+V P+ TY +I GLC+ G ++ AK+L
Sbjct: 405 NMLIDAYCKLGKIDDGFALKEEME----REGIV--PDVGTYNCLIAGLCRNGNIEAAKKL 458
Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
Q+ K + P++VT+ ++ G+C + +A L EM G++P +T+N++M CK
Sbjct: 459 FDQLTSKGL-PDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYCK 517
Query: 182 NGKMDEASRLLDLM-IQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
G + A+ + M + +R + +YN LL G+ G++ A L M G
Sbjct: 518 EGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKGLVPNRI 577
Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIH 277
+Y I+ KE EM+ +G PD+ H
Sbjct: 578 TYEIV-------KE---------EMVDQGFVPDIEGH 598
Score = 108 bits (271), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 63/268 (23%), Positives = 132/268 (49%), Gaps = 3/268 (1%)
Query: 198 HGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEG 257
+G + A + L+ R + ++ M + VF+++++IN CK ++
Sbjct: 182 YGYKLSALSCKPLMIALLKENRSADVEYVYKEMIRRKIQPNVFTFNVVINALCKTGKMNK 241
Query: 258 ALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFK---LFDEMQRNGVAADTWTYRT 314
A + +M G P+VV +NTL G ++ + +K + EM N V+ + T+
Sbjct: 242 ARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNI 301
Query: 315 FIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGV 374
IDG K+ + ++++F + + ++ +YNSLI+GLC G++ A+ + +
Sbjct: 302 LIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAG 361
Query: 375 LVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVI 434
+ PN++TY+ +I G C + + +A D+F ++ VP ++MLI + ++ +
Sbjct: 362 VQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGF 421
Query: 435 ELLHKMKEINVMPDASIVSIVVDLLAKN 462
L +M+ ++PD + ++ L +N
Sbjct: 422 ALKEEMEREGIVPDVGTYNCLIAGLCRN 449
Score = 101 bits (251), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 67/278 (24%), Positives = 132/278 (47%), Gaps = 6/278 (2%)
Query: 209 TLLDGFCLTGRVNHAKELF--VSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEML 266
+ LDGF G + +F +SM C +++ + +L+ Y N E +
Sbjct: 122 SFLDGFVRNGSDHQVHSIFHAISMCDNVCVNSIIA-DMLVLAYANNSRFELGFEAFKRSG 180
Query: 267 SKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIV 326
G K + L + L + ++ ++ EM R + + +T+ I+ LCK G +
Sbjct: 181 YYGYKLSALSCKPLMIALLKENRSADVEYVYKEMIRRKIQPNVFTFNVVINALCKTGKMN 240
Query: 327 EAVELFHTLRILKCEFDIRAYNSLIDGLCK---SGRLEIALELFRSLPCGVLVPNVVTYS 383
+A ++ +++ C ++ +YN+LIDG CK +G++ A + + + + PN+ T++
Sbjct: 241 KARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFN 300
Query: 384 IMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEI 443
I+I G D + + +F +M + V PNVI+++ LI G + S+ I + KM
Sbjct: 301 ILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSA 360
Query: 444 NVMPDASIVSIVVDLLAKNEISLNSLPSFTVHEQQEEV 481
V P+ + +++ KN++ +L F + Q V
Sbjct: 361 GVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAV 398
Score = 100 bits (250), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 55/184 (29%), Positives = 97/184 (52%), Gaps = 8/184 (4%)
Query: 1 MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
+G++ GF + + + PD T+ LI GLC I A LF +L G PD+ T
Sbjct: 414 LGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKGL-PDLVT 472
Query: 61 YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
+ L+ G CR + A L +EM+ + G+ +P +TY ++ G CKEG + A
Sbjct: 473 FHILMEGYCRKGESRKAAMLLKEMS----KMGL--KPRHLTYNIVMKGYCKEGNLKAATN 526
Query: 121 LLLQM-KDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDEL 179
+ QM K++ ++ NV +Y +++G+ +A L EM+++G+ PN +T+ ++ +E+
Sbjct: 527 MRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKGLVPNRITYEIVKEEM 586
Query: 180 CKNG 183
G
Sbjct: 587 VDQG 590
Score = 72.0 bits (175), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 62/254 (24%), Positives = 116/254 (45%), Gaps = 46/254 (18%)
Query: 261 LYSEMLSKGIKPDVVI-HNTLFVGLFEIH-QVERAFKLFDEMQRNGVAADTWTYRTFIDG 318
L+ +++S + PD+ + + + V +I +E FKL + A R+F+DG
Sbjct: 70 LFRQLISSELDPDLCLRYYSWLVKNSDISVSLELTFKLLHSLAN---AKRYSKIRSFLDG 126
Query: 319 LCKNGYIVEAVELFHTLRILK--CEFDIRAYNSLIDGLCKSGRLEIALELFR-------- 368
+NG + +FH + + C I A + L+ + R E+ E F+
Sbjct: 127 FVRNGSDHQVHSIFHAISMCDNVCVNSIIA-DMLVLAYANNSRFELGFEAFKRSGYYGYK 185
Query: 369 --SLPCGVLV-------------------------PNVVTYSIMIGGLCNDGQMDKARDL 401
+L C L+ PNV T++++I LC G+M+KARD+
Sbjct: 186 LSALSCKPLMIALLKENRSADVEYVYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDV 245
Query: 402 FLDMEENAVVPNVITFDMLIRGFIRINEPSKVIE---LLHKMKEINVMPDASIVSIVVDL 458
DM+ PNV++++ LI G+ ++ K+ + +L +M E +V P+ + +I++D
Sbjct: 246 MEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDG 305
Query: 459 LAKNEISLNSLPSF 472
K++ S+ F
Sbjct: 306 FWKDDNLPGSMKVF 319
>sp|Q9C6S6|PPR67_ARATH Putative pentatricopeptide repeat-containing protein At1g31840
OS=Arabidopsis thaliana GN=At1g31840 PE=2 SV=2
Length = 840
Score = 228 bits (580), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 130/447 (29%), Positives = 237/447 (53%), Gaps = 6/447 (1%)
Query: 2 GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
G ++ VV R+L +P+ VT+T LIKGLC + RI EA ++ ++ G EP + TY
Sbjct: 370 GDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTY 429
Query: 62 TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
++L++G C+ + L+E+M + P+ V Y ++DGL K+G + A
Sbjct: 430 SSLIDGFCKCGNLRSGFALYEDMIK------MGYPPDVVIYGVLVDGLSKQGLMLHAMRF 483
Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
++M ++I+ NVV + S+I G+C ++EA ++F M G++P+V TF +M
Sbjct: 484 SVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIM 543
Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
G+++EA L M + G+ PDA Y TL+D FC + +LF M+ +
Sbjct: 544 EGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISADIAV 603
Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
+++I+ K IE A ++ ++ ++PD+V +NT+ G + +++ A ++F+ ++
Sbjct: 604 CNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLK 663
Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLE 361
+T T I LCKN + A+ +F + + + Y L+D KS +E
Sbjct: 664 VTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIE 723
Query: 362 IALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLI 421
+ +LF + + P++V+YSI+I GLC G++D+A ++F + ++P+V+ + +LI
Sbjct: 724 GSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILI 783
Query: 422 RGFIRINEPSKVIELLHKMKEINVMPD 448
RG+ ++ + L M V PD
Sbjct: 784 RGYCKVGRLVEAALLYEHMLRNGVKPD 810
Score = 216 bits (551), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 144/481 (29%), Positives = 230/481 (47%), Gaps = 29/481 (6%)
Query: 10 VLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLC 69
+L +L P+ VTF +LI G C + A LF + G EPD+ Y+TL++G
Sbjct: 273 LLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYF 332
Query: 70 RTSHTIVALNLFEEMANGNGEFGVV--------------------------CE---PNTV 100
+ + LF + + + VV C+ PN V
Sbjct: 333 KAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVV 392
Query: 101 TYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEM 160
TYT +I GLC++G + +A + Q+ + ++P++VTY+S+I GFC + L+ +M
Sbjct: 393 TYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDM 452
Query: 161 MDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRV 220
+ G P+VV + V++D L K G M A R M+ +R + +N+L+DG+C R
Sbjct: 453 IKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRF 512
Query: 221 NHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTL 280
+ A ++F M G K V +++ ++ +E AL L+ M G++PD + + TL
Sbjct: 513 DEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTL 572
Query: 281 FVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKC 340
+ + +LFD MQRN ++AD I L K I +A + F+ L K
Sbjct: 573 IDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKM 632
Query: 341 EFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARD 400
E DI YN++I G C RL+ A +F L PN VT +I+I LC + MD A
Sbjct: 633 EPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIR 692
Query: 401 LFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLA 460
+F M E PN +T+ L+ F + + +L +M+E + P SI++D L
Sbjct: 693 MFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLC 752
Query: 461 K 461
K
Sbjct: 753 K 753
>sp|Q9SV46|PP282_ARATH Pentatricopeptide repeat-containing protein At3g54980,
mitochondrial OS=Arabidopsis thaliana GN=At3g54980 PE=2
SV=1
Length = 851
Score = 225 bits (574), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 138/486 (28%), Positives = 239/486 (49%), Gaps = 43/486 (8%)
Query: 7 GFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVN 66
V+ ++ K +P++VTF+ LI+ + +A + K+ V G P VF T++
Sbjct: 358 ALVLFDKMEKEGPSPNSVTFSVLIEWFRKNGEMEKALEFYKKMEVLGLTPSVFHVHTIIQ 417
Query: 67 GLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMK 126
G + AL LF+E + E G+ N TI+ LCK+G D+A ELL +M+
Sbjct: 418 GWLKGQKHEEALKLFDE----SFETGLA---NVFVCNTILSWLCKQGKTDEATELLSKME 470
Query: 127 DKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMD 186
+ I PNVV+Y +V+ G C K+ + A+ +F ++++G++PN T+++++D +N
Sbjct: 471 SRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNILEKGLKPNNYTYSILIDGCFRNHDEQ 530
Query: 187 EASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSM---------------- 230
A +++ M + + Y T+++G C G+ + A+EL +M
Sbjct: 531 NALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKRLCVSCMSYNSI 590
Query: 231 -----------------ESM---GCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGI 270
E M G V +Y+ L+NG CKN ++ AL + EM +KG+
Sbjct: 591 IDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGV 650
Query: 271 KPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVE 330
K D+ + L G + +E A LF E+ G+ Y + I G G +V A++
Sbjct: 651 KLDIPAYGALIDGFCKRSNMESASALFSELLEEGLNPSQPIYNSLISGFRNLGNMVAALD 710
Query: 331 LFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLC 390
L+ + D+ Y +LIDGL K G L +A EL+ + LVP+ + Y++++ GL
Sbjct: 711 LYKKMLKDGLRCDLGTYTTLIDGLLKDGNLILASELYTEMQAVGLVPDEIIYTVIVNGLS 770
Query: 391 NDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDAS 450
GQ K +F +M++N V PNV+ ++ +I G R + L +M + ++PD +
Sbjct: 771 KKGQFVKVVKMFEEMKKNNVTPNVLIYNAVIAGHYREGNLDEAFRLHDEMLDKGILPDGA 830
Query: 451 IVSIVV 456
I+V
Sbjct: 831 TFDILV 836
Score = 214 bits (546), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 121/410 (29%), Positives = 222/410 (54%), Gaps = 7/410 (1%)
Query: 28 SLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEEMANG 87
+++ LC + + EA L +K+ G P+V +Y ++ G CR + +A +F +
Sbjct: 448 TILSWLCKQGKTDEATELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNIL-- 505
Query: 88 NGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYA 147
E G+ +PN TY+ +IDG + A E++ M NI+ N V Y ++I G C
Sbjct: 506 --EKGL--KPNNYTYSILIDGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLCKV 561
Query: 148 KDWNEAKRLFIEMMDQG-VQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFT 206
++A+ L M+++ + + +++N I+D K G+MD A + M +G+ P+ T
Sbjct: 562 GQTSKARELLANMIEEKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVIT 621
Query: 207 YNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEML 266
Y +L++G C R++ A E+ M++ G K + +Y LI+G+CK +E A +L+SE+L
Sbjct: 622 YTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGFCKRSNMESASALFSELL 681
Query: 267 SKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIV 326
+G+ P I+N+L G + + A L+ +M ++G+ D TY T IDGL K+G ++
Sbjct: 682 EEGLNPSQPIYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKDGNLI 741
Query: 327 EAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMI 386
A EL+ ++ + D Y +++GL K G+ +++F + + PNV+ Y+ +I
Sbjct: 742 LASELYTEMQAVGLVPDEIIYTVIVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVI 801
Query: 387 GGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIEL 436
G +G +D+A L +M + ++P+ TFD+L+ G + +P + L
Sbjct: 802 AGHYREGNLDEAFRLHDEMLDKGILPDGATFDILVSGQVGNLQPVRAASL 851
Score = 204 bits (519), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 137/482 (28%), Positives = 240/482 (49%), Gaps = 43/482 (8%)
Query: 16 KSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTI 75
K P T+TS+I + + +A L ++ G +V T+L+ G C+ + +
Sbjct: 297 KKLCVPSQETYTSVILASVKQGNMDDAIRLKDEMLSDGISMNVVAATSLITGHCKNNDLV 356
Query: 76 VALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVV 135
AL LF++M PN+VT++ +I+ K G ++KA E +M+ + P+V
Sbjct: 357 SALVLFDKMEKEGP------SPNSVTFSVLIEWFRKNGEMEKALEFYKKMEVLGLTPSVF 410
Query: 136 TYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLM 195
++I+G+ + EA +LF E + G+ NV N I+ LCK GK DEA+ LL M
Sbjct: 411 HVHTIIQGWLKGQKHEEALKLFDESFETGL-ANVFVCNTILSWLCKQGKTDEATELLSKM 469
Query: 196 IQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEI 255
G+ P+ +YN ++ G C ++ A+ +F ++ G K ++YSILI+G +N +
Sbjct: 470 ESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNILEKGLKPNNYTYSILIDGCFRNHDE 529
Query: 256 EGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKL------------------- 296
+ AL + + M S I+ + V++ T+ GL ++ Q +A +L
Sbjct: 530 QNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKRLCVSCMSYNS 589
Query: 297 -----------------FDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILK 339
++EM NG++ + TY + ++GLCKN + +A+E+ ++
Sbjct: 590 IIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKG 649
Query: 340 CEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKAR 399
+ DI AY +LIDG CK +E A LF L L P+ Y+ +I G N G M A
Sbjct: 650 VKLDIPAYGALIDGFCKRSNMESASALFSELLEEGLNPSQPIYNSLISGFRNLGNMVAAL 709
Query: 400 DLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLL 459
DL+ M ++ + ++ T+ LI G ++ EL +M+ + ++PD I +++V+ L
Sbjct: 710 DLYKKMLKDGLRCDLGTYTTLIDGLLKDGNLILASELYTEMQAVGLVPDEIIYTVIVNGL 769
Query: 460 AK 461
+K
Sbjct: 770 SK 771
Score = 199 bits (506), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 132/470 (28%), Positives = 223/470 (47%), Gaps = 40/470 (8%)
Query: 22 DAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNLF 81
D VT L++ E + EA + ++ G EPD Y+ V C+T +A +L
Sbjct: 232 DNVTTQLLMRASLREEKPAEALEVLSRAIERGAEPDSLLYSLAVQACCKTLDLAMANSLL 291
Query: 82 EEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVI 141
EM +C P+ TYT++I K+G +D A L +M I NVV TS+I
Sbjct: 292 REMKEKK-----LCVPSQETYTSVILASVKQGNMDDAIRLKDEMLSDGISMNVVAATSLI 346
Query: 142 RGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVR 201
G C D A LF +M +G PN VTF+V+++ KNG+M++A M G+
Sbjct: 347 TGHCKNNDLVSALVLFDKMEKEGPSPNSVTFSVLIEWFRKNGEMEKALEFYKKMEVLGLT 406
Query: 202 PDAFTYNTLLDGF----------------------------------CLTGRVNHAKELF 227
P F +T++ G+ C G+ + A EL
Sbjct: 407 PSVFHVHTIIQGWLKGQKHEEALKLFDESFETGLANVFVCNTILSWLCKQGKTDEATELL 466
Query: 228 VSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEI 287
MES G V SY+ ++ G+C+ K ++ A ++S +L KG+KP+ ++ L G F
Sbjct: 467 SKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNILEKGLKPNNYTYSILIDGCFRN 526
Query: 288 HQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELF-HTLRILKCEFDIRA 346
H + A ++ + M + + + Y+T I+GLCK G +A EL + + + +
Sbjct: 527 HDEQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKRLCVSCMS 586
Query: 347 YNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDME 406
YNS+IDG K G ++ A+ + + + PNV+TY+ ++ GLC + +MD+A ++ +M+
Sbjct: 587 YNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMK 646
Query: 407 ENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVV 456
V ++ + LI GF + + L ++ E + P I + ++
Sbjct: 647 NKGVKLDIPAYGALIDGFCKRSNMESASALFSELLEEGLNPSQPIYNSLI 696
Score = 132 bits (333), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 105/450 (23%), Positives = 201/450 (44%), Gaps = 39/450 (8%)
Query: 49 LRVFGCEPDVFTYTT--LVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTII 106
+ + P+ + + L+ + ++ T +A L ++ + FG E N+ + ++
Sbjct: 113 IHILVSSPETYGRASDLLIRYVSTSNPTPMASVLVSKLVDSAKSFGF--EVNSRAFNYLL 170
Query: 107 DGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQ 166
+ K+ D A +++ QM + ++ P + EAK L+ M+ GV
Sbjct: 171 NAYSKDRQTDHAVDIVNQMLELDVIPFFPYVNRTLSALVQRNSLTEAKELYSRMVAIGVD 230
Query: 167 PNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKEL 226
+ VT ++M + K EA +L I+ G PD+ Y+ + C T + A L
Sbjct: 231 GDNVTTQLLMRASLREEKPAEALEVLSRAIERGAEPDSLLYSLAVQACCKTLDLAMANSL 290
Query: 227 FVSM-ESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLF 285
M E C + +Y+ +I K ++ A+ L EMLS GI +VV +L G
Sbjct: 291 LREMKEKKLCVPSQETYTSVILASVKQGNMDDAIRLKDEMLSDGISMNVVAATSLITGHC 350
Query: 286 EIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRIL------- 338
+ + + A LFD+M++ G + ++ T+ I+ KNG + +A+E + + +L
Sbjct: 351 KNNDLVSALVLFDKMEKEGPSPNSVTFSVLIEWFRKNGEMEKALEFYKKMEVLGLTPSVF 410
Query: 339 -------------KCEFDIRAY--------------NSLIDGLCKSGRLEIALELFRSLP 371
K E ++ + N+++ LCK G+ + A EL +
Sbjct: 411 HVHTIIQGWLKGQKHEEALKLFDESFETGLANVFVCNTILSWLCKQGKTDEATELLSKME 470
Query: 372 CGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPS 431
+ PNVV+Y+ ++ G C MD AR +F ++ E + PN T+ +LI G R ++
Sbjct: 471 SRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNILEKGLKPNNYTYSILIDGCFRNHDEQ 530
Query: 432 KVIELLHKMKEINVMPDASIVSIVVDLLAK 461
+E+++ M N+ + + +++ L K
Sbjct: 531 NALEVVNHMTSSNIEVNGVVYQTIINGLCK 560
>sp|O49436|PP327_ARATH Pentatricopeptide repeat-containing protein At4g20090
OS=Arabidopsis thaliana GN=EMB1025 PE=3 SV=1
Length = 660
Score = 223 bits (567), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 125/400 (31%), Positives = 208/400 (52%), Gaps = 9/400 (2%)
Query: 20 TPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALN 79
+P+ ++F +IK LC + A +F + C PD +TY TL++GLC+ A+
Sbjct: 184 SPNGLSFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAVL 243
Query: 80 LFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTS 139
L +EM + C P+ V Y +IDGLCK+G + + +L+ M K PN VTY +
Sbjct: 244 LLDEMQSEG------CSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNT 297
Query: 140 VIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHG 199
+I G C ++A L M+ PN VT+ +++ L K + +A RLL M + G
Sbjct: 298 LIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERG 357
Query: 200 VRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGAL 259
+ Y+ L+ G G+ A L+ M GCK + YS+L++G C+ + A
Sbjct: 358 YHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAK 417
Query: 260 SLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGL 319
+ + M++ G P+ +++L G F+ E A +++ EM + G + + + Y IDGL
Sbjct: 418 EILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGL 477
Query: 320 CKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPC---GVLV 376
C G + EA+ ++ + + + D AY+S+I GLC G ++ AL+L+ + C
Sbjct: 478 CGVGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQEEPKSQ 537
Query: 377 PNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVIT 416
P+VVTY+I++ GLC + +A DL M + P+VIT
Sbjct: 538 PDVVTYNILLDGLCMQKDISRAVDLLNSMLDRGCDPDVIT 577
Score = 219 bits (559), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 131/420 (31%), Positives = 216/420 (51%), Gaps = 9/420 (2%)
Query: 56 PDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFV 115
P+ ++ ++ LC+ A+ +F M C P+ TY T++DGLCKE +
Sbjct: 185 PNGLSFNLVIKALCKLRFVDRAIEVFRGMPERK------CLPDGYTYCTLMDGLCKEERI 238
Query: 116 DKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVI 175
D+A LL +M+ + P+ V Y +I G C D +L M +G PN VT+N +
Sbjct: 239 DEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTL 298
Query: 176 MDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGC 235
+ LC GK+D+A LL+ M+ P+ TY TL++G R A L SME G
Sbjct: 299 IHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGY 358
Query: 236 KHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFK 295
YS+LI+G K + E A+SL+ +M KG KP++V+++ L GL + A +
Sbjct: 359 HLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKE 418
Query: 296 LFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLC 355
+ + M +G + +TY + + G K G EAV+++ + C + Y+ LIDGLC
Sbjct: 419 ILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLC 478
Query: 356 KSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDM---EENAVVP 412
GR++ A+ ++ + + P+ V YS +I GLC G MD A L+ +M EE P
Sbjct: 479 GVGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQEEPKSQP 538
Query: 413 NVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEISLNSLPSF 472
+V+T+++L+ G + S+ ++LL+ M + PD + ++ L++ S + SF
Sbjct: 539 DVVTYNILLDGLCMQKDISRAVDLLNSMLDRGCDPDVITCNTFLNTLSEKSNSCDKGRSF 598
Score = 217 bits (552), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 135/439 (30%), Positives = 216/439 (49%), Gaps = 65/439 (14%)
Query: 21 PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
PD T+ +L+ GLC E RI EA L +++ GC P Y L++GLC+ L
Sbjct: 220 PDGYTYCTLMDGLCKEERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKL 279
Query: 81 FEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSV 140
+ M F C PN VTY T+I GLC +G +DKA LL +M PN VTY ++
Sbjct: 280 VDNM------FLKGCVPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTL 333
Query: 141 IRGFCYAKDWNEAKR-----------------------------------LFIEMMDQGV 165
I G + +A R L+ +M ++G
Sbjct: 334 INGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGC 393
Query: 166 QPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKE 225
+PN+V ++V++D LC+ GK +EA +L+ MI G P+A+TY++L+ GF TG A +
Sbjct: 394 KPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQ 453
Query: 226 LFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLF 285
++ M+ GC F YS+LI+G C ++ A+ ++S+ML+ GIKPD V ++++ GL
Sbjct: 454 VWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLC 513
Query: 286 EIHQVERAFKLFDEM---QRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEF 342
I ++ A KL+ EM + D TY +DGLC I AV+L +++ C+
Sbjct: 514 GIGSMDAALKLYHEMLCQEEPKSQPDVVTYNILLDGLCMQKDISRAVDLLNSMLDRGCDP 573
Query: 343 DIRAYNSLIDGL------CKSGRL---EIALELFR----SLPCGV--------LVPNVVT 381
D+ N+ ++ L C GR E+ + L + S C + L P T
Sbjct: 574 DVITCNTFLNTLSEKSNSCDKGRSFLEELVVRLLKRQRVSGACTIVEVMLGKYLAPKTST 633
Query: 382 YSIMIGGLCNDGQMDKARD 400
+++++ +C +++ A D
Sbjct: 634 WAMIVREICKPKKINAAID 652
Score = 103 bits (256), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 67/247 (27%), Positives = 121/247 (48%), Gaps = 32/247 (12%)
Query: 2 GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
G+ + +L R++ S P+A T++SL+KG EA ++ ++ GC + F Y
Sbjct: 411 GKPNEAKEILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCY 470
Query: 62 TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKA--- 118
+ L++GLC A+ ++ +M + +P+TV Y++II GLC G +D A
Sbjct: 471 SVLIDGLCGVGRVKEAMMVWSKM------LTIGIKPDTVAYSSIIKGLCGIGSMDAALKL 524
Query: 119 -KELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMD 177
E+L Q + K+ +P+VVTY ++ G C KD + A L M+D+G P+V+T N ++
Sbjct: 525 YHEMLCQEEPKS-QPDVVTYNILLDGLCMQKDISRAVDLLNSMLDRGCDPDVITCNTFLN 583
Query: 178 EL------CKNG---------------KMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCL 216
L C G ++ A ++++M+ + P T+ ++ C
Sbjct: 584 TLSEKSNSCDKGRSFLEELVVRLLKRQRVSGACTIVEVMLGKYLAPKTSTWAMIVREICK 643
Query: 217 TGRVNHA 223
++N A
Sbjct: 644 PKKINAA 650
Score = 80.9 bits (198), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/244 (23%), Positives = 112/244 (45%), Gaps = 7/244 (2%)
Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSK-GIKPDVVIHNTLFVGLFEIHQVERAFKLFD- 298
S+ ++ Y K + A+ L+ M+ + K V N++ + R + +D
Sbjct: 114 SFIVVFRAYGKAHLPDKAVDLFHRMVDEFRCKRSVKSFNSVLNVIINEGLYHRGLEFYDY 173
Query: 299 ----EMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGL 354
M N ++ + ++ I LCK ++ A+E+F + KC D Y +L+DGL
Sbjct: 174 VVNSNMNMN-ISPNGLSFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGL 232
Query: 355 CKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNV 414
CK R++ A+ L + P+ V Y+++I GLC G + + L +M VPN
Sbjct: 233 CKEERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNE 292
Query: 415 ITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEISLNSLPSFTV 474
+T++ LI G + K + LL +M +P+ +++ L K + +++ +
Sbjct: 293 VTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSS 352
Query: 475 HEQQ 478
E++
Sbjct: 353 MEER 356
Score = 65.5 bits (158), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 89/193 (46%), Gaps = 27/193 (13%)
Query: 1 MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKL---RVFGCEPD 57
+GRV +V ++L PD V ++S+IKGLC + A L+ ++ +PD
Sbjct: 480 VGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQEEPKSQPD 539
Query: 58 VFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLC-KEGFVD 116
V TY L++GLC A++L M + C+P+ +T T ++ L K D
Sbjct: 540 VVTYNILLDGLCMQKDISRAVDLLNSMLDRG------CDPDVITCNTFLNTLSEKSNSCD 593
Query: 117 KAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIE-MMDQGVQPNVVTFNVI 175
K + L ++ + +K V+ G C +E M+ + + P T+ +I
Sbjct: 594 KGRSFLEELVVRLLKRQRVS------GAC----------TIVEVMLGKYLAPKTSTWAMI 637
Query: 176 MDELCKNGKMDEA 188
+ E+CK K++ A
Sbjct: 638 VREICKPKKINAA 650
>sp|Q9M907|PP217_ARATH Pentatricopeptide repeat-containing protein At3g06920
OS=Arabidopsis thaliana GN=At3g06920 PE=2 SV=1
Length = 871
Score = 222 bits (565), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 134/472 (28%), Positives = 240/472 (50%), Gaps = 7/472 (1%)
Query: 1 MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
MG+V V + K P+ T+ LI LC ++ A L ++ G P+V T
Sbjct: 356 MGKVDEALKVFEEMKKDA-APNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRT 414
Query: 61 YTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKE 120
+V+ LC++ A +FEEM VC P+ +T+ ++IDGL K G VD A +
Sbjct: 415 VNIMVDRLCKSQKLDEACAMFEEMDYK------VCTPDEITFCSLIDGLGKVGRVDDAYK 468
Query: 121 LLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELC 180
+ +M D + + N + YTS+I+ F + +++ +M++Q P++ N MD +
Sbjct: 469 VYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMF 528
Query: 181 KNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVF 240
K G+ ++ + + + PDA +Y+ L+ G G N ELF SM+ GC
Sbjct: 529 KAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTR 588
Query: 241 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
+Y+I+I+G+CK ++ A L EM +KG +P VV + ++ GL +I +++ A+ LF+E
Sbjct: 589 AYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEA 648
Query: 301 QRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRL 360
+ + + Y + IDG K G I EA + L ++ +NSL+D L K+ +
Sbjct: 649 KSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEI 708
Query: 361 EIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDML 420
AL F+S+ PN VTY I+I GLC + +KA + +M++ + P+ I++ +
Sbjct: 709 NEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTM 768
Query: 421 IRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEISLNSLPSF 472
I G + ++ L + K +PD++ + +++ L+ ++++ F
Sbjct: 769 ISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEGLSNGNRAMDAFSLF 820
Score = 220 bits (561), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 138/464 (29%), Positives = 230/464 (49%), Gaps = 9/464 (1%)
Query: 1 MGRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFT 60
+G+V + I + PD VT+TS+I LC +R+ EA +F L P +
Sbjct: 251 VGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYA 310
Query: 61 YTTLVNGLCRTSHTIVALNLFE-EMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAK 119
Y T++ G A +L E + A G+ P+ + Y I+ L K G VD+A
Sbjct: 311 YNTMIMGYGSAGKFDEAYSLLERQRAKGS-------IPSVIAYNCILTCLRKMGKVDEAL 363
Query: 120 ELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDEL 179
++ +MK K+ PN+ TY +I C A + A L M G+ PNV T N+++D L
Sbjct: 364 KVFEEMK-KDAAPNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRL 422
Query: 180 CKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTV 239
CK+ K+DEA + + M PD T+ +L+DG GRV+ A +++ M C+
Sbjct: 423 CKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNS 482
Query: 240 FSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDE 299
Y+ LI + + E +Y +M+++ PD+ + NT +F+ + E+ +F+E
Sbjct: 483 IVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEE 542
Query: 300 MQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGR 359
++ D +Y I GL K G+ E ELF++++ C D RAYN +IDG CK G+
Sbjct: 543 IKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGK 602
Query: 360 LEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDM 419
+ A +L + P VVTY +I GL ++D+A LF + + + NV+ +
Sbjct: 603 VNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSS 662
Query: 420 LIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNE 463
LI GF ++ + +L ++ + + P+ + ++D L K E
Sbjct: 663 LIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAE 706
Score = 196 bits (499), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 130/488 (26%), Positives = 239/488 (48%), Gaps = 30/488 (6%)
Query: 3 RVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYT 62
++ G+ V+ + K F P +T+LI A + LF +++ G EP V +T
Sbjct: 148 KLREGYDVVQMMRKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFT 207
Query: 63 TLVNGLCRTSHTIVALNLFEEMANGN---------------GEFGVV------------- 94
TL+ G + AL+L +EM + + G+ G V
Sbjct: 208 TLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEAN 267
Query: 95 -CEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEA 153
+P+ VTYT++I LCK +D+A E+ ++ P Y ++I G+ A ++EA
Sbjct: 268 GLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEA 327
Query: 154 KRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDG 213
L +G P+V+ +N I+ L K GK+DEA ++ + M + P+ TYN L+D
Sbjct: 328 YSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMKKDAA-PNLSTYNILIDM 386
Query: 214 FCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPD 273
C G+++ A EL SM+ G V + +I+++ CK+++++ A +++ EM K PD
Sbjct: 387 LCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPD 446
Query: 274 VVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFH 333
+ +L GL ++ +V+ A+K++++M + ++ Y + I +G + +++
Sbjct: 447 EITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYK 506
Query: 334 TLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDG 393
+ C D++ N+ +D + K+G E +F + VP+ +YSI+I GL G
Sbjct: 507 DMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAG 566
Query: 394 QMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVS 453
++ +LF M+E V + ++++I GF + + +K +LL +MK P
Sbjct: 567 FANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYG 626
Query: 454 IVVDLLAK 461
V+D LAK
Sbjct: 627 SVIDGLAK 634
Score = 186 bits (473), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 123/469 (26%), Positives = 223/469 (47%), Gaps = 7/469 (1%)
Query: 10 VLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLC 69
+LG + + F P T ++ G +++ E + +R F P YTTL+
Sbjct: 120 ILGEMSVAGFGPSVNTCIEMVLGCVKANKLREGYDVVQMMRKFKFRPAFSAYTTLIGAFS 179
Query: 70 RTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKN 129
+H+ + L LF++M E G EP +TT+I G KEG VD A LL +MK +
Sbjct: 180 AVNHSDMMLTLFQQMQ----ELGY--EPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSS 233
Query: 130 IKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEAS 189
+ ++V Y I F + A + F E+ G++P+ VT+ ++ LCK ++DEA
Sbjct: 234 LDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAV 293
Query: 190 RLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGY 249
+ + + ++ P + YNT++ G+ G+ + A L + G +V +Y+ ++
Sbjct: 294 EMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCL 353
Query: 250 CKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADT 309
K +++ AL ++ EM K P++ +N L L +++ AF+L D MQ+ G+ +
Sbjct: 354 RKMGKVDEALKVFEEM-KKDAAPNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNV 412
Query: 310 WTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRS 369
T +D LCK+ + EA +F + C D + SLIDGL K GR++ A +++
Sbjct: 413 RTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEK 472
Query: 370 LPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINE 429
+ N + Y+ +I N G+ + ++ DM P++ + + + E
Sbjct: 473 MLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGE 532
Query: 430 PSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEISLNSLPSFTVHEQQ 478
P K + ++K +PDA SI++ L K + + F ++Q
Sbjct: 533 PEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQ 581
Score = 161 bits (408), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 104/335 (31%), Positives = 159/335 (47%), Gaps = 6/335 (1%)
Query: 2 GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
G G + I F PDA +++ LI GL E LF ++ GC D Y
Sbjct: 531 GEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAY 590
Query: 62 TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
+++G C+ A L EEM EP VTY ++IDGL K +D+A L
Sbjct: 591 NIVIDGFCKCGKVNKAYQLLEEMKTKG------FEPTVVTYGSVIDGLAKIDRLDEAYML 644
Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
+ K K I+ NVV Y+S+I GF +EA + E+M +G+ PN+ T+N ++D L K
Sbjct: 645 FEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVK 704
Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
+++EA M + P+ TY L++G C + N A + M+ G K + S
Sbjct: 705 AEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTIS 764
Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
Y+ +I+G K I A +L+ + G PD +N + GL ++ AF LF+E +
Sbjct: 765 YTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEGLSNGNRAMDAFSLFEETR 824
Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLR 336
R G+ T +D L KN + +A + LR
Sbjct: 825 RRGLPIHNKTCVVLLDTLHKNDCLEQAAIVGAVLR 859
>sp|Q940A6|PP325_ARATH Pentatricopeptide repeat-containing protein At4g19440,
chloroplastic OS=Arabidopsis thaliana GN=At4g19440 PE=2
SV=2
Length = 838
Score = 221 bits (563), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 145/490 (29%), Positives = 230/490 (46%), Gaps = 29/490 (5%)
Query: 2 GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
G+V + ++ ++ P+ VTF ++I GL R EA K+ G EP + TY
Sbjct: 287 GKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITY 346
Query: 62 TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTV--------------------- 100
+ LV GL R A + +EM V+ N +
Sbjct: 347 SILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVS 406
Query: 101 --------TYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNE 152
TY T+I G CK G D A+ LL +M N ++TSVI C ++
Sbjct: 407 KGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDS 466
Query: 153 AKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLD 212
A R EM+ + + P ++ LCK+GK +A L + G D T N LL
Sbjct: 467 ALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLH 526
Query: 213 GFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKP 272
G C G+++ A + + GC SY+ LI+G C K+++ A EM+ +G+KP
Sbjct: 527 GLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKP 586
Query: 273 DVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELF 332
D ++ L GLF +++VE A + +D+ +RNG+ D +TY IDG CK E E F
Sbjct: 587 DNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFF 646
Query: 333 HTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCND 392
+ + + YN LI C+SGRL +ALEL + + PN TY+ +I G+
Sbjct: 647 DEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSII 706
Query: 393 GQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIV 452
++++A+ LF +M + PNV + LI G+ ++ + KV LL +M NV P+
Sbjct: 707 SRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITY 766
Query: 453 SIVVDLLAKN 462
++++ A++
Sbjct: 767 TVMIGGYARD 776
Score = 206 bits (523), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 127/453 (28%), Positives = 218/453 (48%), Gaps = 29/453 (6%)
Query: 3 RVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYT 62
R+ + VL + K F P+ + + +LI + +A + + G TY
Sbjct: 358 RIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYN 417
Query: 63 TLVNGLCRTSHTIVALNLFEEMAN-----GNGEF-GVVC--------------------- 95
TL+ G C+ A L +EM + G F V+C
Sbjct: 418 TLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLR 477
Query: 96 --EPNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEA 153
P TT+I GLCK G KA EL Q +K + T +++ G C A +EA
Sbjct: 478 NMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEA 537
Query: 154 KRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDG 213
R+ E++ +G + V++N ++ C K+DEA LD M++ G++PD +TY+ L+ G
Sbjct: 538 FRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICG 597
Query: 214 FCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPD 273
+V A + + + G V++YS++I+G CK + E + EM+SK ++P+
Sbjct: 598 LFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPN 657
Query: 274 VVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFH 333
V++N L ++ A +L ++M+ G++ ++ TY + I G+ + EA LF
Sbjct: 658 TVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFE 717
Query: 334 TLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDG 393
+R+ E ++ Y +LIDG K G++ L R + + PN +TY++MIGG DG
Sbjct: 718 EMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDG 777
Query: 394 QMDKARDLFLDMEENAVVPNVITFDMLIRGFIR 426
+ +A L +M E +VP+ IT+ I G+++
Sbjct: 778 NVTEASRLLNEMREKGIVPDSITYKEFIYGYLK 810
Score = 204 bits (520), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 126/439 (28%), Positives = 215/439 (48%), Gaps = 41/439 (9%)
Query: 53 GCEPDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKE 112
G PDV+ +TT +N C+ A+ LF +M E GV PN VT+ T+IDGL
Sbjct: 268 GVSPDVYLFTTAINAFCKGGKVEEAVKLFSKME----EAGVA--PNVVTFNTVIDGLGMC 321
Query: 113 GFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTF 172
G D+A +M ++ ++P ++TY+ +++G AK +A + EM +G PNV+ +
Sbjct: 322 GRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVY 381
Query: 173 NVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMES 232
N ++D + G +++A + DLM+ G+ + TYNTL+ G+C G+ ++A+ L M S
Sbjct: 382 NNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLS 441
Query: 233 MG---------------CKHTVFSYSI--------------------LINGYCKNKEIEG 257
+G C H +F ++ LI+G CK+ +
Sbjct: 442 IGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSK 501
Query: 258 ALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTWTYRTFID 317
AL L+ + L+KG D N L GL E +++ AF++ E+ G D +Y T I
Sbjct: 502 ALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLIS 561
Query: 318 GLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSLPCGVLVP 377
G C + EA + + D Y+ LI GL ++E A++ + ++P
Sbjct: 562 GCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLP 621
Query: 378 NVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIELL 437
+V TYS+MI G C + ++ ++ F +M V PN + ++ LIR + R S +EL
Sbjct: 622 DVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELR 681
Query: 438 HKMKEINVMPDASIVSIVV 456
MK + P+++ + ++
Sbjct: 682 EDMKHKGISPNSATYTSLI 700
Score = 180 bits (456), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 118/413 (28%), Positives = 206/413 (49%), Gaps = 15/413 (3%)
Query: 74 TIVALNLFEEMANGNGEFGVVCE---PNTVTYTTIIDGLCKEGFVDKAKELLLQMKDKNI 130
++V N F++ F VVC+ P+ +TT I+ CK G V++A +L +M++ +
Sbjct: 248 SLVRANEFQKCCEA---FDVVCKGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGV 304
Query: 131 KPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASR 190
PNVVT+ +VI G ++EA +M+++G++P ++T+++++ L + ++ +A
Sbjct: 305 APNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYF 364
Query: 191 LLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFSYSILINGYC 250
+L M + G P+ YN L+D F G +N A E+ M S G T +Y+ LI GYC
Sbjct: 365 VLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYC 424
Query: 251 KNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQRNGVAADTW 310
KN + + A L EMLS G + ++ L + A + EM ++
Sbjct: 425 KNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGG 484
Query: 311 TYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELFRSL 370
T I GLCK+G +A+EL+ D R N+L+ GLC++G+L+ A + + +
Sbjct: 485 LLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEI 544
Query: 371 PCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEP 430
V + V+Y+ +I G C ++D+A +M + + P+ T+ +LI G +N+
Sbjct: 545 LGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKV 604
Query: 431 SKVIELLHKMKEINVMPDASIVSIVVDLLAKNEISLNSLPSFTVHEQQEEVDE 483
+ I+ K ++PD S+++D K E E QE DE
Sbjct: 605 EEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAE---------RTEEGQEFFDE 648
Score = 168 bits (425), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 101/329 (30%), Positives = 162/329 (49%), Gaps = 6/329 (1%)
Query: 2 GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
G+ S + + L F D T +L+ GLC ++ EA + ++ GC D +Y
Sbjct: 497 GKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSY 556
Query: 62 TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
TL++G C A +EM +P+ TY+ +I GL V++A +
Sbjct: 557 NTLISGCCGKKKLDEAFMFLDEMVKRG------LKPDNYTYSILICGLFNMNKVEEAIQF 610
Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
K + P+V TY+ +I G C A+ E + F EMM + VQPN V +N ++ C+
Sbjct: 611 WDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCR 670
Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
+G++ A L + M G+ P++ TY +L+ G + RV AK LF M G + VF
Sbjct: 671 SGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFH 730
Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQ 301
Y+ LI+GY K ++ L EM SK + P+ + + + G V A +L +EM+
Sbjct: 731 YTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMR 790
Query: 302 RNGVAADTWTYRTFIDGLCKNGYIVEAVE 330
G+ D+ TY+ FI G K G ++EA +
Sbjct: 791 EKGIVPDSITYKEFIYGYLKQGGVLEAFK 819
Score = 146 bits (369), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 84/298 (28%), Positives = 146/298 (48%), Gaps = 6/298 (2%)
Query: 2 GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
G++ F + IL D V++ +LI G C + ++ EA ++ G +PD +TY
Sbjct: 532 GKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTY 591
Query: 62 TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
+ L+ GL + A+ +++ NG P+ TY+ +IDG CK ++ +E
Sbjct: 592 SILICGLFNMNKVEEAIQFWDDCKR-NGML-----PDVYTYSVMIDGCCKAERTEEGQEF 645
Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
+M KN++PN V Y +IR +C + + A L +M +G+ PN T+ ++ +
Sbjct: 646 FDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSI 705
Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSMESMGCKHTVFS 241
+++EA L + M G+ P+ F Y L+DG+ G++ + L M S +
Sbjct: 706 ISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKIT 765
Query: 242 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDE 299
Y+++I GY ++ + A L +EM KGI PD + + G + V AFK DE
Sbjct: 766 YTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEAFKGSDE 823
Score = 89.4 bits (220), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 109/221 (49%), Gaps = 8/221 (3%)
Query: 244 ILINGYCKNKEIEG---ALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEM 300
+LI YC + +G AL ++ + +KG+ P N L L ++ ++ + FD +
Sbjct: 206 LLIEVYCTQFKRDGCYLALDVFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEAFDVV 265
Query: 301 QRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRL 360
+ GV+ D + + T I+ CK G + EAV+LF + ++ +N++IDGL GR
Sbjct: 266 CK-GVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRY 324
Query: 361 EIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDML 420
+ A + + P ++TYSI++ GL ++ A + +M + PNVI ++ L
Sbjct: 325 DEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNL 384
Query: 421 IRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAK 461
I FI +K IE+ K++ V S+ S + L K
Sbjct: 385 IDSFIEAGSLNKAIEI----KDLMVSKGLSLTSSTYNTLIK 421
>sp|Q9M9X9|PPR18_ARATH Pentatricopeptide repeat-containing protein At1g06710,
mitochondrial OS=Arabidopsis thaliana GN=At1g06710 PE=2
SV=1
Length = 987
Score = 218 bits (556), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 146/482 (30%), Positives = 227/482 (47%), Gaps = 57/482 (11%)
Query: 7 GFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVN 66
F++ + + D T+T ++ C I +A F ++R GC P+V TYT L++
Sbjct: 502 AFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIH 561
Query: 67 GLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKELLLQM- 125
+ A LFE M + C PN VTY+ +IDG CK G V+KA ++ +M
Sbjct: 562 AYLKAKKVSYANELFETMLSEG------CLPNIVTYSALIDGHCKAGQVEKACQIFERMC 615
Query: 126 ---------------KDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVV 170
D + +PNVVTY +++ GFC + EA++L M +G +PN +
Sbjct: 616 GSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQI 675
Query: 171 TFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSM 230
++ ++D LCK GK+DEA + M +HG +TY++L+D + R + A ++ M
Sbjct: 676 VYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKM 735
Query: 231 ESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQV 290
C V Y+ +I+G CK + + A L M KG +P+VV + + G I ++
Sbjct: 736 LENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKI 795
Query: 291 ERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELF----------HTLRILKC 340
E +L + M GVA + TYR ID CKNG + A L HT K
Sbjct: 796 ETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKV 855
Query: 341 ------EFD-----------------IRAYNSLIDGLCKSGRLEIALELFRSLP--CGVL 375
EF + Y LID L K+ RLE+AL L + L
Sbjct: 856 IEGFNKEFIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSATL 915
Query: 376 VPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRINEPSKVIE 435
V TY+ +I LC +++ A LF +M + V+P + +F LI+G R ++ S+ +
Sbjct: 916 VDYSSTYNSLIESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSKISEALL 975
Query: 436 LL 437
LL
Sbjct: 976 LL 977
Score = 215 bits (548), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 152/530 (28%), Positives = 236/530 (44%), Gaps = 86/530 (16%)
Query: 19 FTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGL---------- 68
F PD V +T LI GLC S EA ++R C P+V TY+TL+ G
Sbjct: 298 FVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCK 357
Query: 69 ----------CRTSHTIVALNLFEEMANGNGEFG-------VVCE--PNTVTYTTIIDGL 109
C S I + +G+ + V C P V Y +I +
Sbjct: 358 RVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSI 417
Query: 110 CKE------GFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQ 163
C + +D A++ +M + N + +S R C A + +A + EM+ Q
Sbjct: 418 CGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQ 477
Query: 164 GVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHA 223
G P+ T++ +++ LC KM+ A L + M + G+ D +TY ++D FC G + A
Sbjct: 478 GFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQA 537
Query: 224 KELFVSMESMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVG 283
++ F M +GC V +Y+ LI+ Y K K++ A L+ MLS+G P++V ++ L G
Sbjct: 538 RKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDG 597
Query: 284 LFEIHQVERAFKLFDEM----------------QRNGVAADTWTYRTFIDGLCKNGYIVE 327
+ QVE+A ++F+ M N + TY +DG CK+ + E
Sbjct: 598 HCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEE 657
Query: 328 AVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALEL--------------------- 366
A +L + + CE + Y++LIDGLCK G+L+ A E+
Sbjct: 658 ARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLID 717
Query: 367 ------FRSLPCGVL--------VPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVP 412
+ L VL PNVV Y+ MI GLC G+ D+A L MEE P
Sbjct: 718 RYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQP 777
Query: 413 NVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKN 462
NV+T+ +I GF I + +ELL +M V P+ +++D KN
Sbjct: 778 NVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKN 827
Score = 200 bits (509), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 138/482 (28%), Positives = 226/482 (46%), Gaps = 31/482 (6%)
Query: 2 GRVSHGFVVLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTY 61
G S LGR+ F P T+ LI+ R+ A+ + ++ + D FT
Sbjct: 214 GSFSIALEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMSLANLRMDGFTL 273
Query: 62 TTLVNGLCRTSHTIVALNLFEEMANGNGEFGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 121
LC+ AL L E E V P+TV YT +I GLC+ ++A +
Sbjct: 274 RCFAYSLCKVGKWREALTLVET------ENFV---PDTVFYTKLISGLCEASLFEEAMDF 324
Query: 122 LLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCK 181
L +M+ + PNVVTY++++ G K KR+ MM +G P+ FN ++ C
Sbjct: 325 LNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCT 384
Query: 182 NGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGR------VNHAKELFVSMESMGC 235
+G A +LL M++ G P YN L+ C ++ A++ + M + G
Sbjct: 385 SGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGV 444
Query: 236 KHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFK 295
+ S C + E A S+ EM+ +G PD ++ + L ++E AF
Sbjct: 445 VLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFL 504
Query: 296 LFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLC 355
LF+EM+R G+ AD +TY +D CK G I +A + F+ +R + C ++ Y +LI
Sbjct: 505 LFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYL 564
Query: 356 KSGRLEIALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLF-----------LD 404
K+ ++ A ELF ++ +PN+VTYS +I G C GQ++KA +F +D
Sbjct: 565 KAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVD 624
Query: 405 M-----EENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLL 459
M ++N+ PNV+T+ L+ GF + + + +LL M P+ + ++D L
Sbjct: 625 MYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGL 684
Query: 460 AK 461
K
Sbjct: 685 CK 686
Score = 157 bits (396), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 112/357 (31%), Positives = 168/357 (47%), Gaps = 45/357 (12%)
Query: 21 PDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGLCRTSHTIVALNL 80
P+ VT+ +L+ G C R+ EA L + + GCEP+ Y L++GLC+ A +
Sbjct: 637 PNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEV 696
Query: 81 FEEMANG-------------NGEFGV----------------VCEPNTVTYTTIIDGLCK 111
EM+ + F V C PN V YT +IDGLCK
Sbjct: 697 KTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCK 756
Query: 112 EGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVT 171
G D+A +L+ M++K +PNVVTYT++I GF L M +GV PN VT
Sbjct: 757 VGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVT 816
Query: 172 FNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSM- 230
+ V++D CKNG +D A LL+ M Q Y +++GF KE S+
Sbjct: 817 YRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGF--------NKEFIESLG 868
Query: 231 --ESMGCKHT---VFSYSILINGYCKNKEIEGALSLYSEM--LSKGIKPDVVIHNTLFVG 283
+ +G T + Y +LI+ K + +E AL L E+ S + +N+L
Sbjct: 869 LLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIES 928
Query: 284 LFEIHQVERAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKC 340
L ++VE AF+LF EM + GV + ++ + I GL +N I EA+ L + + C
Sbjct: 929 LCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSKISEALLLLDFISHMVC 985
Score = 124 bits (310), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 107/450 (23%), Positives = 176/450 (39%), Gaps = 52/450 (11%)
Query: 50 RVFGCEPDVFTYTTLVNGLCRTSHTIVALNLFEEMANGNGE-FGVVCEPNTVTYTTIIDG 108
R G + Y LV+ + R V +++ + + E FG ++
Sbjct: 157 RQIGYKHTAPVYNALVDLIVRDDDEKVPEEFLQQIRDDDKEVFGEF-------LNVLVRK 209
Query: 109 LCKEGFVDKAKELLLQMKDKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPN 168
C+ G A E L ++KD +P+ TY +I+ F A + A + EM ++ +
Sbjct: 210 HCRNGSFSIALEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMSLANLRMD 269
Query: 169 VVTFNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFV 228
T LCK GK EA L L+ PD Y L+ G C A +
Sbjct: 270 GFTLRCFAYSLCKVGKWREA---LTLVETENFVPDTVFYTKLISGLCEASLFEEAMDFLN 326
Query: 229 SMESMGCKHTVFSYSILING-----------------------------------YCKNK 253
M + C V +YS L+ G YC +
Sbjct: 327 RMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSG 386
Query: 254 EIEGALSLYSEMLSKGIKPDVVIHNTLFVGL------FEIHQVERAFKLFDEMQRNGVAA 307
+ A L +M+ G P V++N L + ++ A K + EM GV
Sbjct: 387 DHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVL 446
Query: 308 DTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEIALELF 367
+ +F LC G +A + + D Y+ +++ LC + ++E+A LF
Sbjct: 447 NKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLF 506
Query: 368 RSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIRGFIRI 427
+ G LV +V TY+IM+ C G +++AR F +M E PNV+T+ LI +++
Sbjct: 507 EEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKA 566
Query: 428 NEPSKVIELLHKMKEINVMPDASIVSIVVD 457
+ S EL M +P+ S ++D
Sbjct: 567 KKVSYANELFETMLSEGCLPNIVTYSALID 596
Score = 90.1 bits (222), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 72/295 (24%), Positives = 117/295 (39%), Gaps = 11/295 (3%)
Query: 172 FNVIMDELCKNGKMDEASRLLDLMIQHGVRPDAFTYNTLLDGFCLTGRVNHAKELFVSME 231
NV++ + C+NG A L + RP TYN L+ F R++ A + M
Sbjct: 203 LNVLVRKHCRNGSFSIALEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMS 262
Query: 232 SMGCKHTVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVE 291
+ F+ CK + AL+L ++ PD V + L GL E E
Sbjct: 263 LANLRMDGFTLRCFAYSLCKVGKWREALTLVE---TENFVPDTVFYTKLISGLCEASLFE 319
Query: 292 RAFKLFDEMQRNGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLI 351
A + M+ + TY T + G + + + + + C + +NSL+
Sbjct: 320 EAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLV 379
Query: 352 DGLCKSGRLEIALELFRSL-PCGVLVPNVVTYSIMIGGLCNDGQ------MDKARDLFLD 404
C SG A +L + + CG + P V Y+I+IG +C D +D A + +
Sbjct: 380 HAYCTSGDHSYAYKLLKKMVKCGHM-PGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSE 438
Query: 405 MEENAVVPNVITFDMLIRGFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLL 459
M VV N I R + K ++ +M +PD S S V++ L
Sbjct: 439 MLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYL 493
Score = 84.7 bits (208), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 100/225 (44%), Gaps = 3/225 (1%)
Query: 243 SILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIHNTLFVGLFEIHQVERAFKLFDEMQR 302
++L+ +C+N AL + +P +N L + +++ A + EM
Sbjct: 204 NVLVRKHCRNGSFSIALEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMSL 263
Query: 303 NGVAADTWTYRTFIDGLCKNGYIVEAVELFHTLRILKCEFDIRAYNSLIDGLCKSGRLEI 362
+ D +T R F LCK G EA+ L T + D Y LI GLC++ E
Sbjct: 264 ANLRMDGFTLRCFAYSLCKVGKWREALTLVETENFVP---DTVFYTKLISGLCEASLFEE 320
Query: 363 ALELFRSLPCGVLVPNVVTYSIMIGGLCNDGQMDKARDLFLDMEENAVVPNVITFDMLIR 422
A++ + +PNVVTYS ++ G N Q+ + + + M P+ F+ L+
Sbjct: 321 AMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVH 380
Query: 423 GFIRINEPSKVIELLHKMKEINVMPDASIVSIVVDLLAKNEISLN 467
+ + S +LL KM + MP + +I++ + ++ SLN
Sbjct: 381 AYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLN 425
Score = 73.6 bits (179), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 70/257 (27%), Positives = 102/257 (39%), Gaps = 65/257 (25%)
Query: 10 VLGRILKSCFTPDAVTFTSLIKGLCAESRIMEAAALFTKLRVFGCEPDVFTYTTLVNGL- 68
VL ++L++ P+ V +T +I GLC + EA L + GC+P+V TYT +++G
Sbjct: 731 VLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFG 790
Query: 69 ----------------------------------CRTSHTIVALNLFEEMANG------- 87
C+ VA NL EEM
Sbjct: 791 MIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTA 850
Query: 88 ---------NGEF----GVVCE-------PNTVTYTTIIDGLCKEGFVDKAKELLLQMK- 126
N EF G++ E P Y +ID L K ++ A LL ++
Sbjct: 851 GYRKVIEGFNKEFIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVAT 910
Query: 127 -DKNIKPNVVTYTSVIRGFCYAKDWNEAKRLFIEMMDQGVQPNVVTFNVIMDELCKNGKM 185
+ TY S+I C A A +LF EM +GV P + +F ++ L +N K+
Sbjct: 911 FSATLVDYSSTYNSLIESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSKI 970
Query: 186 DEASRLLDLMIQHGVRP 202
EA LLD I H V P
Sbjct: 971 SEALLLLDF-ISHMVCP 986
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.324 0.139 0.413
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 173,223,135
Number of Sequences: 539616
Number of extensions: 7054685
Number of successful extensions: 30482
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 449
Number of HSP's successfully gapped in prelim test: 65
Number of HSP's that attempted gapping in prelim test: 16387
Number of HSP's gapped (non-prelim): 3457
length of query: 487
length of database: 191,569,459
effective HSP length: 121
effective length of query: 366
effective length of database: 126,275,923
effective search space: 46216987818
effective search space used: 46216987818
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 63 (28.9 bits)