BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 011367
(487 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3C7N|B Chain B, Structure Of The Hsp110:hsc70 Nucleotide Exchange Complex
Length = 554
Score = 524 bits (1350), Expect = e-149, Method: Compositional matrix adjust.
Identities = 256/399 (64%), Positives = 312/399 (78%), Gaps = 1/399 (0%)
Query: 8 RQATKDAGIIAGLNVARIINEPTAAAIAYGLDKK-GGEKNILVFDLGGGTFDVSILTIDN 66
RQATKDAG IAGLNV RIINEPTAAAIAYGLDKK G E+N+L+FDLGGGTFDVSILTI++
Sbjct: 155 RQATKDAGTIAGLNVLRIINEPTAAAIAYGLDKKVGAERNVLIFDLGGGTFDVSILTIED 214
Query: 67 GVFEVLSTNGDTHLGGEDFDQRVMEYFXXXXXXXXXXXXXXXXRAIGXXXXXXXXXXXXX 126
G+FEV ST GDTHLGGEDFD R++ +F RA+
Sbjct: 215 GIFEVKSTAGDTHLGGEDFDNRMVNHFIAEFKRKHKKDISENKRAVRRLRTACERAKRTL 274
Query: 127 XXQHQVRVEIESLFDGIDFSEPLTRARFEELNNDLFRKTMGPVKKAMEDAGLEKNQIDEI 186
Q +EI+SL++GIDF +TRARFEELN DLFR T+ PV+KA+ DA L+K+QI +I
Sbjct: 275 SSSTQASIEIDSLYEGIDFYTSITRARFEELNADLFRGTLDPVEKALRDAKLDKSQIHDI 334
Query: 187 VLVGGSTRIPKVQQLLKDYFDGKEPNKGVNPDEAVAYGAAVQGGILSGEGGDETKDILLL 246
VLVGGSTRIPK+Q+LL+D+F+GKE NK +NPDEAVAYGAAVQ ILSG+ + +D+LLL
Sbjct: 335 VLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILSGDKSENVQDLLLL 394
Query: 247 DVAPLTLGIETVGGVMTKLIPRNTVIPTKKSQVFTTYQDQQTTVSIQVFEGERSLTKDCR 306
DV PL+LGIET GGVMT LI RNT IPTK++Q FTTY D Q V IQV+EGER++TKD
Sbjct: 395 DVTPLSLGIETAGGVMTVLIKRNTTIPTKQTQTFTTYSDNQPGVLIQVYEGERAMTKDNN 454
Query: 307 LLGKFDLSGIPPAPRGTPQIEVTFEVDANGILNVKAEDKGTGKSEKITITNDKGRLSQEE 366
LLGKF+L+GIPPAPRG PQIEVTF++DANGILNV A DK TGK KITITNDKGRLS+E+
Sbjct: 455 LLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAVDKSTGKENKITITNDKGRLSKED 514
Query: 367 IDRMVREAEEFAEEDKKVKEKIDARNSLETYVYNMKNQI 405
I+RMV+EAE++ ED+K ++K+ ++NSLE+Y +NMK +
Sbjct: 515 IERMVQEAEKYKAEDEKQRDKVSSKNSLESYAFNMKATV 553
>pdb|1YUW|A Chain A, Crystal Structure Of Bovine Hsc70(Aa1-554)e213aD214A
MUTANT
Length = 554
Score = 522 bits (1345), Expect = e-148, Method: Compositional matrix adjust.
Identities = 256/399 (64%), Positives = 310/399 (77%), Gaps = 1/399 (0%)
Query: 8 RQATKDAGIIAGLNVARIINEPTAAAIAYGLDKK-GGEKNILVFDLGGGTFDVSILTIDN 66
RQATKDAG IAGLNV RIINEPTAAAIAYGLDKK G E+N+L+FDLGGGTFDVSILTI
Sbjct: 155 RQATKDAGTIAGLNVLRIINEPTAAAIAYGLDKKVGAERNVLIFDLGGGTFDVSILTIAA 214
Query: 67 GVFEVLSTNGDTHLGGEDFDQRVMEYFXXXXXXXXXXXXXXXXRAIGXXXXXXXXXXXXX 126
G+FEV ST GDTHLGGEDFD R++ +F RA+
Sbjct: 215 GIFEVKSTAGDTHLGGEDFDNRMVNHFIAEFKRKHKKDISENKRAVRRLRTACERAKRTL 274
Query: 127 XXQHQVRVEIESLFDGIDFSEPLTRARFEELNNDLFRKTMGPVKKAMEDAGLEKNQIDEI 186
Q +EI+SL++GIDF +TRARFEELN DLFR T+ PV+KA+ DA L+K+QI +I
Sbjct: 275 SSSTQASIEIDSLYEGIDFYTSITRARFEELNADLFRGTLDPVEKALRDAKLDKSQIHDI 334
Query: 187 VLVGGSTRIPKVQQLLKDYFDGKEPNKGVNPDEAVAYGAAVQGGILSGEGGDETKDILLL 246
VLVGGSTRIPK+Q+LL+D+F+GKE NK +NPDEAVAYGAAVQ ILSG+ + +D+LLL
Sbjct: 335 VLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILSGDKSENVQDLLLL 394
Query: 247 DVAPLTLGIETVGGVMTKLIPRNTVIPTKKSQVFTTYQDQQTTVSIQVFEGERSLTKDCR 306
DV PL+LGIET GGVMT LI RNT IPTK++Q FTTY D Q V IQV+EGER++TKD
Sbjct: 395 DVTPLSLGIETAGGVMTVLIKRNTTIPTKQTQTFTTYSDNQPGVLIQVYEGERAMTKDNN 454
Query: 307 LLGKFDLSGIPPAPRGTPQIEVTFEVDANGILNVKAEDKGTGKSEKITITNDKGRLSQEE 366
LLGKF+L+GIPPAPRG PQIEVTF++DANGILNV A DK TGK KITITNDKGRLS+E+
Sbjct: 455 LLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAVDKSTGKENKITITNDKGRLSKED 514
Query: 367 IDRMVREAEEFAEEDKKVKEKIDARNSLETYVYNMKNQI 405
I+RMV+EAE++ ED+K ++K+ ++NSLE+Y +NMK +
Sbjct: 515 IERMVQEAEKYKAEDEKQRDKVSSKNSLESYAFNMKATV 553
>pdb|2V7Z|A Chain A, Crystal Structure Of The 70-Kda Heat Shock Cognate Protein
From Rattus Norvegicus In Post-Atp Hydrolysis State
pdb|2V7Z|B Chain B, Crystal Structure Of The 70-Kda Heat Shock Cognate Protein
From Rattus Norvegicus In Post-Atp Hydrolysis State
Length = 543
Score = 505 bits (1300), Expect = e-143, Method: Compositional matrix adjust.
Identities = 249/389 (64%), Positives = 302/389 (77%), Gaps = 1/389 (0%)
Query: 8 RQATKDAGIIAGLNVARIINEPTAAAIAYGLDKK-GGEKNILVFDLGGGTFDVSILTIDN 66
RQA KDAG IAGLNV RIINEPTAAAIAYGLDKK E+N+L+FDLGGGTFDVSILT ++
Sbjct: 155 RQAAKDAGTIAGLNVLRIINEPTAAAIAYGLDKKVRAERNVLIFDLGGGTFDVSILTTED 214
Query: 67 GVFEVLSTNGDTHLGGEDFDQRVMEYFXXXXXXXXXXXXXXXXRAIGXXXXXXXXXXXXX 126
G+FEV ST GDTHLGGEDFD R++ +F RA+
Sbjct: 215 GIFEVKSTAGDTHLGGEDFDNRMVNHFIAEFKRKHKKDISENKRAVRRLRTACERAKRTL 274
Query: 127 XXQHQVRVEIESLFDGIDFSEPLTRARFEELNNDLFRKTMGPVKKAMEDAGLEKNQIDEI 186
Q +EI+SL++GIDF +TRARFEELN DLFR T+ PV+KA+ DA L+K+QI +I
Sbjct: 275 SSSTQASIEIDSLYEGIDFYTSITRARFEELNADLFRGTLDPVEKALRDAKLDKSQIHDI 334
Query: 187 VLVGGSTRIPKVQQLLKDYFDGKEPNKGVNPDEAVAYGAAVQGGILSGEGGDETKDILLL 246
VLVGGSTRIPK+Q+LL+D+F+GKE NK +NPDEAVAYGAAVQ ILSG+ + +D+LLL
Sbjct: 335 VLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILSGDKSENVQDLLLL 394
Query: 247 DVAPLTLGIETVGGVMTKLIPRNTVIPTKKSQVFTTYQDQQTTVSIQVFEGERSLTKDCR 306
DV PL+LGIET GGVMT LI RNT IPTK++Q FTTY D Q V IQV+EGER++TKD
Sbjct: 395 DVTPLSLGIETAGGVMTVLIKRNTTIPTKQTQTFTTYSDNQPGVLIQVYEGERAMTKDNN 454
Query: 307 LLGKFDLSGIPPAPRGTPQIEVTFEVDANGILNVKAEDKGTGKSEKITITNDKGRLSQEE 366
LLGKF+L+GIPPAPRG PQIEVTF++DANGILNV A DK TGK KITITNDKGRLS+E+
Sbjct: 455 LLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAVDKSTGKENKITITNDKGRLSKED 514
Query: 367 IDRMVREAEEFAEEDKKVKEKIDARNSLE 395
I+RMV+EAE++ ED+K ++K+ ++NSLE
Sbjct: 515 IERMVQEAEKYKAEDEKQRDKVSSKNSLE 543
>pdb|2V7Y|A Chain A, Crystal Structure Of The Molecular Chaperone Dnak From
Geobacillus Kaustophilus Hta426 In Post-Atp Hydrolysis
State
pdb|4ANI|C Chain C, Structural Basis For The Intermolecular Communication
Between Dnak And Grpe In The Dnak Chaperone System From
Geobacillus Kaustophilus Hta426
pdb|4ANI|D Chain D, Structural Basis For The Intermolecular Communication
Between Dnak And Grpe In The Dnak Chaperone System From
Geobacillus Kaustophilus Hta426
pdb|4ANI|G Chain G, Structural Basis For The Intermolecular Communication
Between Dnak And Grpe In The Dnak Chaperone System From
Geobacillus Kaustophilus Hta426
pdb|4ANI|H Chain H, Structural Basis For The Intermolecular Communication
Between Dnak And Grpe In The Dnak Chaperone System From
Geobacillus Kaustophilus Hta426
Length = 509
Score = 403 bits (1036), Expect = e-112, Method: Compositional matrix adjust.
Identities = 214/389 (55%), Positives = 271/389 (69%), Gaps = 11/389 (2%)
Query: 8 RQATKDAGIIAGLNVARIINEPTAAAIAYGLDKKGGEKNILVFDLGGGTFDVSILTIDNG 67
RQATKDAG IAGL V RIINEPTAAA+AYGLDK+ ++ ILV+DLGGGTFDVSIL + +G
Sbjct: 125 RQATKDAGRIAGLEVERIINEPTAAALAYGLDKEE-DQTILVYDLGGGTFDVSILELGDG 183
Query: 68 VFEVLSTNGDTHLGGEDFDQRVMEYFXXXXXXXXXXXXXXXXRAIGXXXXXXXXXXXXXX 127
VFEV +T GD HLGG+DFDQ +++Y A+
Sbjct: 184 VFEVKATAGDNHLGGDDFDQVIIDYLVNQFKQEHGIDLSKDKMALQRLKDAAEKAKKELS 243
Query: 128 XQHQVRVEIESLFDG----IDFSEPLTRARFEELNNDLFRKTMGPVKKAMEDAGLEKNQI 183
Q ++ + + + LTRA+FEEL+ L +TMGPV++A++DAGL I
Sbjct: 244 GVTQTQISLPFISANENGPLHLEMTLTRAKFEELSAHLVERTMGPVRQALQDAGLTPADI 303
Query: 184 DEIVLVGGSTRIPKVQQLLKDYFDGKEPNKGVNPDEAVAYGAAVQGGILSGEGGDETKDI 243
D+++LVGGSTRIP VQ+ +K GKEP+KGVNPDE VA GAA+QGG+++GE KD+
Sbjct: 304 DKVILVGGSTRIPAVQEAIKREL-GKEPHKGVNPDEVVAIGAAIQGGVIAGE----VKDV 358
Query: 244 LLLDVAPLTLGIETVGGVMTKLIPRNTVIPTKKSQVFTTYQDQQTTVSIQVFEGERSLTK 303
+LLDV PL+LGIET+GGV TKLI RNT IPT KSQVFTT D QTTV I V +GER +
Sbjct: 359 VLLDVTPLSLGIETMGGVFTKLIERNTTIPTSKSQVFTTAADNQTTVDIHVLQGERPMAA 418
Query: 304 DCRLLGKFDLSGIPPAPRGTPQIEVTFEVDANGILNVKAEDKGTGKSEKITITNDKGRLS 363
D + LG+F L+GIPPAPRG PQIEVTF++DANGI++V+A+D GT K + ITI + G LS
Sbjct: 419 DNKSLGRFQLTGIPPAPRGVPQIEVTFDIDANGIVHVRAKDLGTNKEQSITIKSSSG-LS 477
Query: 364 QEEIDRMVREAEEFAEEDKKVKEKIDARN 392
+EEI RM++EAEE AE D+K KE + RN
Sbjct: 478 EEEIQRMIKEAEENAEADRKRKEAAELRN 506
>pdb|2KHO|A Chain A, Nmr-Rdc XRAY STRUCTURE OF E. COLI HSP70 (DNAK) CHAPERONE
(1-605) Complexed With Adp And Substrate
Length = 605
Score = 395 bits (1016), Expect = e-110, Method: Compositional matrix adjust.
Identities = 224/470 (47%), Positives = 301/470 (64%), Gaps = 26/470 (5%)
Query: 8 RQATKDAGIIAGLNVARIINEPTAAAIAYGLDKKGGEKNILVFDLGGGTFDVSILTIDN- 66
RQATKDAG IAGL V RIINEPTAAA+AYGLDK G + I V+DLGGGTFD+SI+ ID
Sbjct: 151 RQATKDAGRIAGLEVKRIINEPTAAALAYGLDKGTGNRTIAVYDLGGGTFDISIIEIDEV 210
Query: 67 ---GVFEVLSTNGDTHLGGEDFDQRVMEYFXXXXXXXXXXXXXXXXRAIGXXXXXXXXXX 123
FEVL+TNGDTHLGGEDFD R++ Y A+
Sbjct: 211 DGEKTFEVLATNGDTHLGGEDFDSRLINYLVEEFKKDQGIDLRNDPLAMQRLKEAAEKAK 270
Query: 124 XXXXXQHQVRVEIESLFDGIDFSEP------LTRARFEELNNDLFRKTMGPVKKAMEDAG 177
Q V + + D + P +TRA+ E L DL +++ P+K A++DAG
Sbjct: 271 IELSSAQQTDVNLP--YITADATGPKHMNIKVTRAKLESLVEDLVNRSIEPLKVALQDAG 328
Query: 178 LEKNQIDEIVLVGGSTRIPKVQQLLKDYFDGKEPNKGVNPDEAVAYGAAVQGGILSGEGG 237
L + ID+++LVGG TR+P VQ+ + ++F GKEP K VNPDEAVA GAAVQGG+L+G+
Sbjct: 329 LSVSDIDDVILVGGQTRMPMVQKKVAEFF-GKEPRKDVNPDEAVAIGAAVQGGVLTGD-- 385
Query: 238 DETKDILLLDVAPLTLGIETVGGVMTKLIPRNTVIPTKKSQVFTTYQDQQTTVSIQVFEG 297
KD+LLLDV PL+LGIET+GGVMT LI +NT IPTK SQVF+T +D Q+ V+I V +G
Sbjct: 386 --VKDVLLLDVTPLSLGIETMGGVMTTLIAKNTTIPTKHSQVFSTAEDNQSAVTIHVLQG 443
Query: 298 ERSLTKDCRLLGKFDLSGIPPAPRGTPQIEVTFEVDANGILNVKAEDKGTGKSEKITITN 357
ER D + LG+F+L GI PAPRG PQIEVTF++DA+GIL+V A+DK +GK +KITI
Sbjct: 444 ERKRAADNKSLGQFNLDGINPAPRGMPQIEVTFDIDADGILHVSAKDKNSGKEQKITIKA 503
Query: 358 DKGRLSQEEIDRMVREAEEFAEEDKKVKEKIDARNSLETYVYNMKNQINDKDKLADKLES 417
G L+++EI +MVR+AE AE D+K E + RN + +++ + Q+ ++ DKL +
Sbjct: 504 SSG-LNEDEIQKMVRDAEANAEADRKFDELVQTRNQGDHLLHSTRKQV---EEAGDKLPA 559
Query: 418 DEKDKIETAVKEALEWLDDNQSAE-KEDYEEKLKEVEAVCNPIITAVYQR 466
D+K TA++ AL L+ E K E K++E+ V ++ Q+
Sbjct: 560 DDK----TAIESALTALETALKGEDKAAIEAKMQELAQVSQKLMEIAQQQ 605
>pdb|4B9Q|A Chain A, Open Conformation Of Atp-Bound Hsp70 Homolog Dnak
pdb|4B9Q|B Chain B, Open Conformation Of Atp-Bound Hsp70 Homolog Dnak
pdb|4B9Q|C Chain C, Open Conformation Of Atp-Bound Hsp70 Homolog Dnak
pdb|4B9Q|D Chain D, Open Conformation Of Atp-Bound Hsp70 Homolog Dnak
Length = 605
Score = 384 bits (987), Expect = e-107, Method: Compositional matrix adjust.
Identities = 215/435 (49%), Positives = 283/435 (65%), Gaps = 22/435 (5%)
Query: 8 RQATKDAGIIAGLNVARIINEPTAAAIAYGLDKKGGEKNILVFDLGGGTFDVSILTIDN- 66
RQATKDAG IAGL V RIINEPTAAA+AYGLDK G + I V+DLGGG FD+SI+ ID
Sbjct: 151 RQATKDAGRIAGLEVKRIINEPTAAALAYGLDKGTGNRTIAVYDLGGGAFDISIIEIDEV 210
Query: 67 ---GVFEVLSTNGDTHLGGEDFDQRVMEYFXXXXXXXXXXXXXXXXRAIGXXXXXXXXXX 123
FEVL+TNGDTHLGGEDFD R++ Y A
Sbjct: 211 DGEKTFEVLATNGDTHLGGEDFDSRLINYLVEEFKKDQGIDLRNDPLAXQRLKEAAEKAK 270
Query: 124 XXXXXQHQVRVEIESLFDGIDFSEP------LTRARFEELNNDLFRKTMGPVKKAMEDAG 177
Q V + + D + P +TRA+ E L DL +++ P+K A++DAG
Sbjct: 271 IELSSAQQTDVNLPYIT--ADATGPKHXNIKVTRAKLESLVEDLVNRSIEPLKVALQDAG 328
Query: 178 LEKNQIDEIVLVGGSTRIPKVQQLLKDYFDGKEPNKGVNPDEAVAYGAAVQGGILSGEGG 237
L + ID+++LVGG TR P VQ+ + ++F GKEP K VNPDEAVA GAAVQGG+L+G+
Sbjct: 329 LSVSDIDDVILVGGQTRXPXVQKKVAEFF-GKEPRKDVNPDEAVAIGAAVQGGVLTGD-- 385
Query: 238 DETKDILLLDVAPLTLGIETVGGVMTKLIPRNTVIPTKKSQVFTTYQDQQTTVSIQVFEG 297
KD+LLLDV PL+LGIET GGV T LI +NT IPTK SQVF+T +D Q+ V+I V +G
Sbjct: 386 --VKDVLLLDVTPLSLGIETXGGVXTTLIAKNTTIPTKHSQVFSTAEDNQSAVTIHVLQG 443
Query: 298 ERSLTKDCRLLGKFDLSGIPPAPRGTPQIEVTFEVDANGILNVKAEDKGTGKSEKITITN 357
ER D + LG+F+L GI PAPRG PQIEVTF++DA+GIL+V A+DK +GK +KITI
Sbjct: 444 ERKRAADNKSLGQFNLDGINPAPRGXPQIEVTFDIDADGILHVSAKDKNSGKEQKITIKA 503
Query: 358 DKGRLSQEEIDRMVREAEEFAEEDKKVKEKIDARNSLETYVYNMKNQINDKDKLADKLES 417
G L+++EI + VR+AE AE D+K +E + RN + +++ + Q+ ++ DKL +
Sbjct: 504 SSG-LNEDEIQKXVRDAEANAEADRKCEELVQTRNQGDHLLHSTRKQV---EEAGDKLPA 559
Query: 418 DEKDKIETAVKEALE 432
D+K IE+A+ ALE
Sbjct: 560 DDKTAIESALT-ALE 573
>pdb|3IUC|A Chain A, Crystal Structure Of The Human 70kda Heat Shock Protein 5
(BipGRP78) ATPASE DOMAIN IN COMPLEX WITH ADP
pdb|3IUC|C Chain C, Crystal Structure Of The Human 70kda Heat Shock Protein 5
(BipGRP78) ATPASE DOMAIN IN COMPLEX WITH ADP
Length = 408
Score = 323 bits (827), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 157/228 (68%), Positives = 182/228 (79%)
Query: 8 RQATKDAGIIAGLNVARIINEPTAAAIAYGLDKKGGEKNILVFDLGGGTFDVSILTIDNG 67
RQATKDAG IAGLNV RIINEPTAAAIAYGLDK+ GEKNILVFDLGGGTFDVS+LTIDNG
Sbjct: 179 RQATKDAGTIAGLNVMRIINEPTAAAIAYGLDKREGEKNILVFDLGGGTFDVSLLTIDNG 238
Query: 68 VFEVLSTNGDTHLGGEDFDQRVMEYFXXXXXXXXXXXXXXXXRAIGXXXXXXXXXXXXXX 127
VFEV++TNGDTHLGGEDFDQRVME+F RA+
Sbjct: 239 VFEVVATNGDTHLGGEDFDQRVMEHFIKLYKKKTGKDVRKDNRAVQKLRREVEKAKRALS 298
Query: 128 XQHQVRVEIESLFDGIDFSEPLTRARFEELNNDLFRKTMGPVKKAMEDAGLEKNQIDEIV 187
QHQ R+EIES ++G DFSE LTRA+FEELN DLFR TM PV+K +ED+ L+K+ IDEIV
Sbjct: 299 SQHQARIEIESFYEGEDFSETLTRAKFEELNMDLFRSTMKPVQKVLEDSDLKKSDIDEIV 358
Query: 188 LVGGSTRIPKVQQLLKDYFDGKEPNKGVNPDEAVAYGAAVQGGILSGE 235
LVGGSTRIPK+QQL+K++F+GKEP++G+NPDEAVAYGAAVQ G+LSG+
Sbjct: 359 LVGGSTRIPKIQQLVKEFFNGKEPSRGINPDEAVAYGAAVQAGVLSGD 406
>pdb|3LDL|A Chain A, Crystal Structure Of Human Grp78 (70kda Heat Shock Protein
5 BIP) Atpase Domain In Complex With Atp
pdb|3LDL|B Chain B, Crystal Structure Of Human Grp78 (70kda Heat Shock Protein
5 BIP) Atpase Domain In Complex With Atp
pdb|3LDN|A Chain A, Crystal Structure Of Human Grp78 (70kda Heat Shock Protein
5 BIP) Atpase Domain In Apo Form
pdb|3LDN|B Chain B, Crystal Structure Of Human Grp78 (70kda Heat Shock Protein
5 BIP) Atpase Domain In Apo Form
pdb|3LDO|A Chain A, Crystal Structure Of Human Grp78 (70kda Heat Shock Protein
5 / Bip) Atpase Domain In Complex With Amppnp
pdb|3LDO|B Chain B, Crystal Structure Of Human Grp78 (70kda Heat Shock Protein
5 / Bip) Atpase Domain In Complex With Amppnp
pdb|3LDP|A Chain A, Crystal Structure Of Human Grp78 (70kda Heat Shock Protein
5 BIP) Atpase Domain In Complex With Small Molecule
Inhibitor
pdb|3LDP|B Chain B, Crystal Structure Of Human Grp78 (70kda Heat Shock Protein
5 BIP) Atpase Domain In Complex With Small Molecule
Inhibitor
Length = 384
Score = 323 bits (827), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 157/227 (69%), Positives = 181/227 (79%)
Query: 8 RQATKDAGIIAGLNVARIINEPTAAAIAYGLDKKGGEKNILVFDLGGGTFDVSILTIDNG 67
RQATKDAG IAGLNV RIINEPTAAAIAYGLDK+ GEKNILVFDLGGGTFDVS+LTIDNG
Sbjct: 158 RQATKDAGTIAGLNVMRIINEPTAAAIAYGLDKREGEKNILVFDLGGGTFDVSLLTIDNG 217
Query: 68 VFEVLSTNGDTHLGGEDFDQRVMEYFXXXXXXXXXXXXXXXXRAIGXXXXXXXXXXXXXX 127
VFEV++TNGDTHLGGEDFDQRVME+F RA+
Sbjct: 218 VFEVVATNGDTHLGGEDFDQRVMEHFIKLYKKKTGKDVRKDNRAVQKLRREVEKAKRALS 277
Query: 128 XQHQVRVEIESLFDGIDFSEPLTRARFEELNNDLFRKTMGPVKKAMEDAGLEKNQIDEIV 187
QHQ R+EIES ++G DFSE LTRA+FEELN DLFR TM PV+K +ED+ L+K+ IDEIV
Sbjct: 278 SQHQARIEIESFYEGEDFSETLTRAKFEELNMDLFRSTMKPVQKVLEDSDLKKSDIDEIV 337
Query: 188 LVGGSTRIPKVQQLLKDYFDGKEPNKGVNPDEAVAYGAAVQGGILSG 234
LVGGSTRIPK+QQL+K++F+GKEP++G+NPDEAVAYGAAVQ G+LSG
Sbjct: 338 LVGGSTRIPKIQQLVKEFFNGKEPSRGINPDEAVAYGAAVQAGVLSG 384
>pdb|2QW9|A Chain A, Crystal Structure Of Bovine Hsc70 (1-394aa)in The Apo
State
pdb|2QW9|B Chain B, Crystal Structure Of Bovine Hsc70 (1-394aa)in The Apo
State
pdb|2QWL|A Chain A, Crystal Structure Of Bovine Hsc70 (1-394aa)in The Adp
State
pdb|2QWL|B Chain B, Crystal Structure Of Bovine Hsc70 (1-394aa)in The Adp
State
pdb|2QWM|A Chain A, Crystal Structure Of Bovine Hsc70 (1-394aa)in The AdpVi
State
pdb|2QWM|B Chain B, Crystal Structure Of Bovine Hsc70 (1-394aa)in The AdpVi
State
Length = 394
Score = 298 bits (762), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 148/240 (61%), Positives = 179/240 (74%), Gaps = 1/240 (0%)
Query: 8 RQATKDAGIIAGLNVARIINEPTAAAIAYGLDKK-GGEKNILVFDLGGGTFDVSILTIDN 66
RQATKDAG IAGLNV RIINEPTAAAIAYGLDKK G E+N+L+FDLGGGTFDVSILTI++
Sbjct: 155 RQATKDAGTIAGLNVLRIINEPTAAAIAYGLDKKVGAERNVLIFDLGGGTFDVSILTIED 214
Query: 67 GVFEVLSTNGDTHLGGEDFDQRVMEYFXXXXXXXXXXXXXXXXRAIGXXXXXXXXXXXXX 126
G+FEV ST GDTHLGGEDFD R++ +F RA+
Sbjct: 215 GIFEVKSTAGDTHLGGEDFDNRMVNHFIAEFKRKHKKDISENKRAVRRLRTACERAKRTL 274
Query: 127 XXQHQVRVEIESLFDGIDFSEPLTRARFEELNNDLFRKTMGPVKKAMEDAGLEKNQIDEI 186
Q +EI+SL++GIDF +TRARFEELN DLFR T+ PV+KA+ DA L+K+QI +I
Sbjct: 275 SSSTQASIEIDSLYEGIDFYTSITRARFEELNADLFRGTLDPVEKALRDAKLDKSQIHDI 334
Query: 187 VLVGGSTRIPKVQQLLKDYFDGKEPNKGVNPDEAVAYGAAVQGGILSGEGGDETKDILLL 246
VLVGGSTRIPK+Q+LL+D+F+GKE NK +NPDEAVAYGAAVQ ILSG+ + +D+LLL
Sbjct: 335 VLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILSGDKSENVQDLLLL 394
>pdb|2QWN|A Chain A, Crystal Structure Of Disulfide-Bond-Crosslinked Complex Of
Bovine Hsc70 (1-386aa)r171c And Bovine Auxilin
(810-910aa)d876c In The AdpPi State
pdb|2QWO|A Chain A, Crystal Structure Of Disulfide-Bond-Crosslinked Complex Of
Bovine Hsc70 (1-394aa)r171c And Bovine Auxilin
(810-910aa)d876c In The AdpPi Form #1
pdb|2QWP|A Chain A, Crystal Structure Of Disulfide-Bond-Crosslinked Complex Of
Bovine Hsc70 (1-394aa)r171c And Bovine Auxilin
(810-910aa)d876c In The AdpPi Form #2
pdb|2QWQ|A Chain A, Crystal Structure Of Disulfide-Bond-Crosslinked Complex Of
Bovine Hsc70 (1-394aa)r171c And Bovine Auxilin
(810-910aa)d876c In The Amppnp Hydrolyzed Form
pdb|2QWR|A Chain A, Crystal Structure Of Disulfide-Bond-Crosslinked Complex Of
Bovine Hsc70 (1-394aa)r171c And Bovine Auxilin
(810-910aa)d876c In The Amppnp Intact Form
Length = 394
Score = 295 bits (754), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 147/240 (61%), Positives = 178/240 (74%), Gaps = 1/240 (0%)
Query: 8 RQATKDAGIIAGLNVARIINEPTAAAIAYGLDKK-GGEKNILVFDLGGGTFDVSILTIDN 66
RQATKDAG IAGLNV IINEPTAAAIAYGLDKK G E+N+L+FDLGGGTFDVSILTI++
Sbjct: 155 RQATKDAGTIAGLNVLCIINEPTAAAIAYGLDKKVGAERNVLIFDLGGGTFDVSILTIED 214
Query: 67 GVFEVLSTNGDTHLGGEDFDQRVMEYFXXXXXXXXXXXXXXXXRAIGXXXXXXXXXXXXX 126
G+FEV ST GDTHLGGEDFD R++ +F RA+
Sbjct: 215 GIFEVKSTAGDTHLGGEDFDNRMVNHFIAEFKRKHKKDISENKRAVRRLRTACERAKRTL 274
Query: 127 XXQHQVRVEIESLFDGIDFSEPLTRARFEELNNDLFRKTMGPVKKAMEDAGLEKNQIDEI 186
Q +EI+SL++GIDF +TRARFEELN DLFR T+ PV+KA+ DA L+K+QI +I
Sbjct: 275 SSSTQASIEIDSLYEGIDFYTSITRARFEELNADLFRGTLDPVEKALRDAKLDKSQIHDI 334
Query: 187 VLVGGSTRIPKVQQLLKDYFDGKEPNKGVNPDEAVAYGAAVQGGILSGEGGDETKDILLL 246
VLVGGSTRIPK+Q+LL+D+F+GKE NK +NPDEAVAYGAAVQ ILSG+ + +D+LLL
Sbjct: 335 VLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILSGDKSENVQDLLLL 394
>pdb|1BA1|A Chain A, Heat-Shock Cognate 70kd Protein 44kd Atpase N-Terminal
Mutant With Cys 17 Replaced By Lys
Length = 386
Score = 290 bits (741), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 144/229 (62%), Positives = 172/229 (75%), Gaps = 1/229 (0%)
Query: 8 RQATKDAGIIAGLNVARIINEPTAAAIAYGLDKK-GGEKNILVFDLGGGTFDVSILTIDN 66
RQATKDAG IAGLNV RIINEPTAAAIAYGLDKK G E+N+L+FDLGGGTFDVSILTI++
Sbjct: 155 RQATKDAGTIAGLNVLRIINEPTAAAIAYGLDKKVGAERNVLIFDLGGGTFDVSILTIED 214
Query: 67 GVFEVLSTNGDTHLGGEDFDQRVMEYFXXXXXXXXXXXXXXXXRAIGXXXXXXXXXXXXX 126
G+FEV ST GDTHLGGEDFD R++ +F RA+
Sbjct: 215 GIFEVKSTAGDTHLGGEDFDNRMVNHFIAEFKRKHKKDISENKRAVRRLRTACERAKRTL 274
Query: 127 XXQHQVRVEIESLFDGIDFSEPLTRARFEELNNDLFRKTMGPVKKAMEDAGLEKNQIDEI 186
Q +EI+SL++GIDF +TRARFEELN DLFR T+ PV+KA+ DA L+K+QI +I
Sbjct: 275 SSSTQASIEIDSLYEGIDFYTSITRARFEELNADLFRGTLDPVEKALRDAKLDKSQIHDI 334
Query: 187 VLVGGSTRIPKVQQLLKDYFDGKEPNKGVNPDEAVAYGAAVQGGILSGE 235
VLVGGSTRIPK+Q+LL+D+F+GKE NK +NPDEAVAYGAAVQ ILSG+
Sbjct: 335 VLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILSGD 383
>pdb|1NGG|A Chain A, Structural Basis Of The 70-Kilodalton Heat Shock Cognate
Protein Atp Hydrolytic Activity, Ii. Structure Of The
Active Site With Adp Or Atp Bound To Wild Type And
Mutant Atpase Fragment
Length = 386
Score = 290 bits (741), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 144/229 (62%), Positives = 172/229 (75%), Gaps = 1/229 (0%)
Query: 8 RQATKDAGIIAGLNVARIINEPTAAAIAYGLDKK-GGEKNILVFDLGGGTFDVSILTIDN 66
RQATKDAG IAGLNV RIINEPTAAAIAYGLDKK G E+N+L+FDLGGGTFDVSILTI++
Sbjct: 155 RQATKDAGTIAGLNVLRIINEPTAAAIAYGLDKKVGAERNVLIFDLGGGTFDVSILTIED 214
Query: 67 GVFEVLSTNGDTHLGGEDFDQRVMEYFXXXXXXXXXXXXXXXXRAIGXXXXXXXXXXXXX 126
G+FEV ST GDTHLGGEDFD R++ +F RA+
Sbjct: 215 GIFEVKSTAGDTHLGGEDFDNRMVNHFIAEFKRKHKKDISENKRAVRRLRTACERAKRTL 274
Query: 127 XXQHQVRVEIESLFDGIDFSEPLTRARFEELNNDLFRKTMGPVKKAMEDAGLEKNQIDEI 186
Q +EI+SL++GIDF +TRARFEELN DLFR T+ PV+KA+ DA L+K+QI +I
Sbjct: 275 SSSTQASIEIDSLYEGIDFYTSITRARFEELNADLFRGTLDPVEKALRDAKLDKSQIHDI 334
Query: 187 VLVGGSTRIPKVQQLLKDYFDGKEPNKGVNPDEAVAYGAAVQGGILSGE 235
VLVGGSTRIPK+Q+LL+D+F+GKE NK +NPDEAVAYGAAVQ ILSG+
Sbjct: 335 VLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILSGD 383
>pdb|1HPM|A Chain A, How Potassium Affects The Activity Of The Molecular
Chaperone Hsc70. Ii. Potassium Binds Specifically In The
Atpase Active Site
pdb|1NGI|A Chain A, Structural Basis Of The 70-Kilodalton Heat Shock Cognate
Protein Atp Hydrolytic Activity, Ii. Structure Of The
Active Site With Adp Or Atp Bound To Wild Type And
Mutant Atpase Fragment
pdb|1NGJ|A Chain A, Structural Basis Of The 70-Kilodalton Heat Shock Cognate
Protein Atp Hydrolytic Activity, Ii. Structure Of The
Active Site With Adp Or Atp Bound To Wild Type And
Mutant Atpase Fragment
pdb|3HSC|A Chain A, Three-Dimensional Structure Of The Atpase Fragment Of A
70k Heat-Shock Cognate Protein
Length = 386
Score = 290 bits (741), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 144/229 (62%), Positives = 172/229 (75%), Gaps = 1/229 (0%)
Query: 8 RQATKDAGIIAGLNVARIINEPTAAAIAYGLDKK-GGEKNILVFDLGGGTFDVSILTIDN 66
RQATKDAG IAGLNV RIINEPTAAAIAYGLDKK G E+N+L+FDLGGGTFDVSILTI++
Sbjct: 155 RQATKDAGTIAGLNVLRIINEPTAAAIAYGLDKKVGAERNVLIFDLGGGTFDVSILTIED 214
Query: 67 GVFEVLSTNGDTHLGGEDFDQRVMEYFXXXXXXXXXXXXXXXXRAIGXXXXXXXXXXXXX 126
G+FEV ST GDTHLGGEDFD R++ +F RA+
Sbjct: 215 GIFEVKSTAGDTHLGGEDFDNRMVNHFIAEFKRKHKKDISENKRAVRRLRTACERAKRTL 274
Query: 127 XXQHQVRVEIESLFDGIDFSEPLTRARFEELNNDLFRKTMGPVKKAMEDAGLEKNQIDEI 186
Q +EI+SL++GIDF +TRARFEELN DLFR T+ PV+KA+ DA L+K+QI +I
Sbjct: 275 SSSTQASIEIDSLYEGIDFYTSITRARFEELNADLFRGTLDPVEKALRDAKLDKSQIHDI 334
Query: 187 VLVGGSTRIPKVQQLLKDYFDGKEPNKGVNPDEAVAYGAAVQGGILSGE 235
VLVGGSTRIPK+Q+LL+D+F+GKE NK +NPDEAVAYGAAVQ ILSG+
Sbjct: 335 VLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILSGD 383
>pdb|1BUP|A Chain A, T13s Mutant Of Bovine 70 Kilodalton Heat Shock Protein
Length = 386
Score = 290 bits (741), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 144/229 (62%), Positives = 172/229 (75%), Gaps = 1/229 (0%)
Query: 8 RQATKDAGIIAGLNVARIINEPTAAAIAYGLDKK-GGEKNILVFDLGGGTFDVSILTIDN 66
RQATKDAG IAGLNV RIINEPTAAAIAYGLDKK G E+N+L+FDLGGGTFDVSILTI++
Sbjct: 155 RQATKDAGTIAGLNVLRIINEPTAAAIAYGLDKKVGAERNVLIFDLGGGTFDVSILTIED 214
Query: 67 GVFEVLSTNGDTHLGGEDFDQRVMEYFXXXXXXXXXXXXXXXXRAIGXXXXXXXXXXXXX 126
G+FEV ST GDTHLGGEDFD R++ +F RA+
Sbjct: 215 GIFEVKSTAGDTHLGGEDFDNRMVNHFIAEFKRKHKKDISENKRAVRRLRTACERAKRTL 274
Query: 127 XXQHQVRVEIESLFDGIDFSEPLTRARFEELNNDLFRKTMGPVKKAMEDAGLEKNQIDEI 186
Q +EI+SL++GIDF +TRARFEELN DLFR T+ PV+KA+ DA L+K+QI +I
Sbjct: 275 SSSTQASIEIDSLYEGIDFYTSITRARFEELNADLFRGTLDPVEKALRDAKLDKSQIHDI 334
Query: 187 VLVGGSTRIPKVQQLLKDYFDGKEPNKGVNPDEAVAYGAAVQGGILSGE 235
VLVGGSTRIPK+Q+LL+D+F+GKE NK +NPDEAVAYGAAVQ ILSG+
Sbjct: 335 VLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILSGD 383
>pdb|1NGH|A Chain A, Structural Basis Of The 70-Kilodalton Heat Shock Cognate
Protein Atp Hydrolytic Activity, Ii. Structure Of The
Active Site With Adp Or Atp Bound To Wild Type And
Mutant Atpase Fragment
Length = 386
Score = 290 bits (741), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 144/229 (62%), Positives = 172/229 (75%), Gaps = 1/229 (0%)
Query: 8 RQATKDAGIIAGLNVARIINEPTAAAIAYGLDKK-GGEKNILVFDLGGGTFDVSILTIDN 66
RQATKDAG IAGLNV RIINEPTAAAIAYGLDKK G E+N+L+FDLGGGTFDVSILTI++
Sbjct: 155 RQATKDAGTIAGLNVLRIINEPTAAAIAYGLDKKVGAERNVLIFDLGGGTFDVSILTIED 214
Query: 67 GVFEVLSTNGDTHLGGEDFDQRVMEYFXXXXXXXXXXXXXXXXRAIGXXXXXXXXXXXXX 126
G+FEV ST GDTHLGGEDFD R++ +F RA+
Sbjct: 215 GIFEVKSTAGDTHLGGEDFDNRMVNHFIAEFKRKHKKDISENKRAVRRLRTACERAKRTL 274
Query: 127 XXQHQVRVEIESLFDGIDFSEPLTRARFEELNNDLFRKTMGPVKKAMEDAGLEKNQIDEI 186
Q +EI+SL++GIDF +TRARFEELN DLFR T+ PV+KA+ DA L+K+QI +I
Sbjct: 275 SSSTQASIEIDSLYEGIDFYTSITRARFEELNADLFRGTLDPVEKALRDAKLDKSQIHDI 334
Query: 187 VLVGGSTRIPKVQQLLKDYFDGKEPNKGVNPDEAVAYGAAVQGGILSGE 235
VLVGGSTRIPK+Q+LL+D+F+GKE NK +NPDEAVAYGAAVQ ILSG+
Sbjct: 335 VLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILSGD 383
>pdb|1NGB|A Chain A, Structural Basis Of The 70-Kilodalton Heat Shock Cognate
Protein Atp Hydrolytic Activity, Ii. Structure Of The
Active Site With Adp Or Atp Bound To Wild Type And
Mutant Atpase Fragment
Length = 386
Score = 288 bits (738), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 143/229 (62%), Positives = 172/229 (75%), Gaps = 1/229 (0%)
Query: 8 RQATKDAGIIAGLNVARIINEPTAAAIAYGLDKK-GGEKNILVFDLGGGTFDVSILTIDN 66
RQATKDAG IAGLNV RIIN+PTAAAIAYGLDKK G E+N+L+FDLGGGTFDVSILTI++
Sbjct: 155 RQATKDAGTIAGLNVLRIINQPTAAAIAYGLDKKVGAERNVLIFDLGGGTFDVSILTIED 214
Query: 67 GVFEVLSTNGDTHLGGEDFDQRVMEYFXXXXXXXXXXXXXXXXRAIGXXXXXXXXXXXXX 126
G+FEV ST GDTHLGGEDFD R++ +F RA+
Sbjct: 215 GIFEVKSTAGDTHLGGEDFDNRMVNHFIAEFKRKHKKDISENKRAVRRLRTACERAKRTL 274
Query: 127 XXQHQVRVEIESLFDGIDFSEPLTRARFEELNNDLFRKTMGPVKKAMEDAGLEKNQIDEI 186
Q +EI+SL++GIDF +TRARFEELN DLFR T+ PV+KA+ DA L+K+QI +I
Sbjct: 275 SSSTQASIEIDSLYEGIDFYTSITRARFEELNADLFRGTLDPVEKALRDAKLDKSQIHDI 334
Query: 187 VLVGGSTRIPKVQQLLKDYFDGKEPNKGVNPDEAVAYGAAVQGGILSGE 235
VLVGGSTRIPK+Q+LL+D+F+GKE NK +NPDEAVAYGAAVQ ILSG+
Sbjct: 335 VLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILSGD 383
>pdb|1NGA|A Chain A, Structural Basis Of The 70-Kilodalton Heat Shock Cognate
Protein Atp Hydrolytic Activity, Ii. Structure Of The
Active Site With Adp Or Atp Bound To Wild Type And
Mutant Atpase Fragment
Length = 386
Score = 288 bits (737), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 143/229 (62%), Positives = 171/229 (74%), Gaps = 1/229 (0%)
Query: 8 RQATKDAGIIAGLNVARIINEPTAAAIAYGLDKK-GGEKNILVFDLGGGTFDVSILTIDN 66
RQATKDAG IAGLNV RIIN PTAAAIAYGLDKK G E+N+L+FDLGGGTFDVSILTI++
Sbjct: 155 RQATKDAGTIAGLNVLRIINSPTAAAIAYGLDKKVGAERNVLIFDLGGGTFDVSILTIED 214
Query: 67 GVFEVLSTNGDTHLGGEDFDQRVMEYFXXXXXXXXXXXXXXXXRAIGXXXXXXXXXXXXX 126
G+FEV ST GDTHLGGEDFD R++ +F RA+
Sbjct: 215 GIFEVKSTAGDTHLGGEDFDNRMVNHFIAEFKRKHKKDISENKRAVRRLRTACERAKRTL 274
Query: 127 XXQHQVRVEIESLFDGIDFSEPLTRARFEELNNDLFRKTMGPVKKAMEDAGLEKNQIDEI 186
Q +EI+SL++GIDF +TRARFEELN DLFR T+ PV+KA+ DA L+K+QI +I
Sbjct: 275 SSSTQASIEIDSLYEGIDFYTSITRARFEELNADLFRGTLDPVEKALRDAKLDKSQIHDI 334
Query: 187 VLVGGSTRIPKVQQLLKDYFDGKEPNKGVNPDEAVAYGAAVQGGILSGE 235
VLVGGSTRIPK+Q+LL+D+F+GKE NK +NPDEAVAYGAAVQ ILSG+
Sbjct: 335 VLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILSGD 383
>pdb|1NGD|A Chain A, Structural Basis Of The 70-kilodalton Heat Shock Cognate
Protein Atp Hydrolytic Activity, Ii. Structure Of The
Active Site With Adp Or Atp Bound To Wild Type And
Mutant Atpase Fragment
Length = 386
Score = 288 bits (737), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 143/229 (62%), Positives = 172/229 (75%), Gaps = 1/229 (0%)
Query: 8 RQATKDAGIIAGLNVARIINEPTAAAIAYGLDKK-GGEKNILVFDLGGGTFDVSILTIDN 66
RQATKDAG IAGLNV RIINEPTAAAIAYGLDKK G E+N+L+FDLGGGTF+VSILTI++
Sbjct: 155 RQATKDAGTIAGLNVLRIINEPTAAAIAYGLDKKVGAERNVLIFDLGGGTFNVSILTIED 214
Query: 67 GVFEVLSTNGDTHLGGEDFDQRVMEYFXXXXXXXXXXXXXXXXRAIGXXXXXXXXXXXXX 126
G+FEV ST GDTHLGGEDFD R++ +F RA+
Sbjct: 215 GIFEVKSTAGDTHLGGEDFDNRMVNHFIAEFKRKHKKDISENKRAVRRLRTACERAKRTL 274
Query: 127 XXQHQVRVEIESLFDGIDFSEPLTRARFEELNNDLFRKTMGPVKKAMEDAGLEKNQIDEI 186
Q +EI+SL++GIDF +TRARFEELN DLFR T+ PV+KA+ DA L+K+QI +I
Sbjct: 275 SSSTQASIEIDSLYEGIDFYTSITRARFEELNADLFRGTLDPVEKALRDAKLDKSQIHDI 334
Query: 187 VLVGGSTRIPKVQQLLKDYFDGKEPNKGVNPDEAVAYGAAVQGGILSGE 235
VLVGGSTRIPK+Q+LL+D+F+GKE NK +NPDEAVAYGAAVQ ILSG+
Sbjct: 335 VLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILSGD 383
>pdb|1NGF|A Chain A, Structural Basis Of The 70-Kilodalton Heat Shock Cognate
Protein Atp Hydrolytic Activity, Ii. Structure Of The
Active Site With Adp Or Atp Bound To Wild Type And
Mutant Atpase Fragment
Length = 386
Score = 288 bits (737), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 143/229 (62%), Positives = 172/229 (75%), Gaps = 1/229 (0%)
Query: 8 RQATKDAGIIAGLNVARIINEPTAAAIAYGLDKK-GGEKNILVFDLGGGTFDVSILTIDN 66
RQATKDAG IAGLNV RIINEPTAAAIAYGLDKK G E+N+L+F+LGGGTFDVSILTI++
Sbjct: 155 RQATKDAGTIAGLNVLRIINEPTAAAIAYGLDKKVGAERNVLIFNLGGGTFDVSILTIED 214
Query: 67 GVFEVLSTNGDTHLGGEDFDQRVMEYFXXXXXXXXXXXXXXXXRAIGXXXXXXXXXXXXX 126
G+FEV ST GDTHLGGEDFD R++ +F RA+
Sbjct: 215 GIFEVKSTAGDTHLGGEDFDNRMVNHFIAEFKRKHKKDISENKRAVRRLRTACERAKRTL 274
Query: 127 XXQHQVRVEIESLFDGIDFSEPLTRARFEELNNDLFRKTMGPVKKAMEDAGLEKNQIDEI 186
Q +EI+SL++GIDF +TRARFEELN DLFR T+ PV+KA+ DA L+K+QI +I
Sbjct: 275 SSSTQASIEIDSLYEGIDFYTSITRARFEELNADLFRGTLDPVEKALRDAKLDKSQIHDI 334
Query: 187 VLVGGSTRIPKVQQLLKDYFDGKEPNKGVNPDEAVAYGAAVQGGILSGE 235
VLVGGSTRIPK+Q+LL+D+F+GKE NK +NPDEAVAYGAAVQ ILSG+
Sbjct: 335 VLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILSGD 383
>pdb|1ATR|A Chain A, Threonine 204 Of The Chaperone Protein Hsc70 Influences
The Structure Of The Active Site But Is Not Essential
For Atp Hydrolysis
Length = 386
Score = 288 bits (737), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 143/229 (62%), Positives = 171/229 (74%), Gaps = 1/229 (0%)
Query: 8 RQATKDAGIIAGLNVARIINEPTAAAIAYGLDKK-GGEKNILVFDLGGGTFDVSILTIDN 66
RQATKDAG IAGLNV RIINEPTAAAIAYGLDKK G E+N+L+FDLGGG FDVSILTI++
Sbjct: 155 RQATKDAGTIAGLNVLRIINEPTAAAIAYGLDKKVGAERNVLIFDLGGGVFDVSILTIED 214
Query: 67 GVFEVLSTNGDTHLGGEDFDQRVMEYFXXXXXXXXXXXXXXXXRAIGXXXXXXXXXXXXX 126
G+FEV ST GDTHLGGEDFD R++ +F RA+
Sbjct: 215 GIFEVKSTAGDTHLGGEDFDNRMVNHFIAEFKRKHKKDISENKRAVRRLRTACERAKRTL 274
Query: 127 XXQHQVRVEIESLFDGIDFSEPLTRARFEELNNDLFRKTMGPVKKAMEDAGLEKNQIDEI 186
Q +EI+SL++GIDF +TRARFEELN DLFR T+ PV+KA+ DA L+K+QI +I
Sbjct: 275 SSSTQASIEIDSLYEGIDFYTSITRARFEELNADLFRGTLDPVEKALRDAKLDKSQIHDI 334
Query: 187 VLVGGSTRIPKVQQLLKDYFDGKEPNKGVNPDEAVAYGAAVQGGILSGE 235
VLVGGSTRIPK+Q+LL+D+F+GKE NK +NPDEAVAYGAAVQ ILSG+
Sbjct: 335 VLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILSGD 383
>pdb|1NGC|A Chain A, Structural Basis Of The 70-Kilodalton Heat Shock Cognate
Protein Atp Hydrolytic Activity, Ii. Structure Of The
Active Site With Adp Or Atp Bound To Wild Type And
Mutant Atpase Fragment
Length = 386
Score = 287 bits (735), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 143/229 (62%), Positives = 171/229 (74%), Gaps = 1/229 (0%)
Query: 8 RQATKDAGIIAGLNVARIINEPTAAAIAYGLDKK-GGEKNILVFDLGGGTFDVSILTIDN 66
RQATKDAG IAGLNV RIINEPTAAAIAYGLDKK G E+N+L+FDLGGGTF VSILTI++
Sbjct: 155 RQATKDAGTIAGLNVLRIINEPTAAAIAYGLDKKVGAERNVLIFDLGGGTFSVSILTIED 214
Query: 67 GVFEVLSTNGDTHLGGEDFDQRVMEYFXXXXXXXXXXXXXXXXRAIGXXXXXXXXXXXXX 126
G+FEV ST GDTHLGGEDFD R++ +F RA+
Sbjct: 215 GIFEVKSTAGDTHLGGEDFDNRMVNHFIAEFKRKHKKDISENKRAVRRLRTACERAKRTL 274
Query: 127 XXQHQVRVEIESLFDGIDFSEPLTRARFEELNNDLFRKTMGPVKKAMEDAGLEKNQIDEI 186
Q +EI+SL++GIDF +TRARFEELN DLFR T+ PV+KA+ DA L+K+QI +I
Sbjct: 275 SSSTQASIEIDSLYEGIDFYTSITRARFEELNADLFRGTLDPVEKALRDAKLDKSQIHDI 334
Query: 187 VLVGGSTRIPKVQQLLKDYFDGKEPNKGVNPDEAVAYGAAVQGGILSGE 235
VLVGGSTRIPK+Q+LL+D+F+GKE NK +NPDEAVAYGAAVQ ILSG+
Sbjct: 335 VLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILSGD 383
>pdb|1NGE|A Chain A, Structural Basis Of The 70-Kilodalton Heat Shock Cognate
Protein Atp Hydrolytic Activity, Ii. Structure Of The
Active Site With Adp Or Atp Bound To Wild Type And
Mutant Atpase Fragment
Length = 386
Score = 287 bits (735), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 143/229 (62%), Positives = 171/229 (74%), Gaps = 1/229 (0%)
Query: 8 RQATKDAGIIAGLNVARIINEPTAAAIAYGLDKK-GGEKNILVFDLGGGTFDVSILTIDN 66
RQATKDAG IAGLNV RIINEPTAAAIAYGLDKK G E+N+L+F LGGGTFDVSILTI++
Sbjct: 155 RQATKDAGTIAGLNVLRIINEPTAAAIAYGLDKKVGAERNVLIFSLGGGTFDVSILTIED 214
Query: 67 GVFEVLSTNGDTHLGGEDFDQRVMEYFXXXXXXXXXXXXXXXXRAIGXXXXXXXXXXXXX 126
G+FEV ST GDTHLGGEDFD R++ +F RA+
Sbjct: 215 GIFEVKSTAGDTHLGGEDFDNRMVNHFIAEFKRKHKKDISENKRAVRRLRTACERAKRTL 274
Query: 127 XXQHQVRVEIESLFDGIDFSEPLTRARFEELNNDLFRKTMGPVKKAMEDAGLEKNQIDEI 186
Q +EI+SL++GIDF +TRARFEELN DLFR T+ PV+KA+ DA L+K+QI +I
Sbjct: 275 SSSTQASIEIDSLYEGIDFYTSITRARFEELNADLFRGTLDPVEKALRDAKLDKSQIHDI 334
Query: 187 VLVGGSTRIPKVQQLLKDYFDGKEPNKGVNPDEAVAYGAAVQGGILSGE 235
VLVGGSTRIPK+Q+LL+D+F+GKE NK +NPDEAVAYGAAVQ ILSG+
Sbjct: 335 VLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILSGD 383
>pdb|1KAX|A Chain A, 70kd Heat Shock Cognate Protein Atpase Domain, K71m Mutant
Length = 381
Score = 287 bits (735), Expect = 8e-78, Method: Compositional matrix adjust.
Identities = 143/227 (62%), Positives = 170/227 (74%), Gaps = 1/227 (0%)
Query: 8 RQATKDAGIIAGLNVARIINEPTAAAIAYGLDKK-GGEKNILVFDLGGGTFDVSILTIDN 66
RQATKDAG IAGLNV RIINEPTAAAIAYGLDKK G E+N+L+FDLGGGTFDVSILTI++
Sbjct: 155 RQATKDAGTIAGLNVLRIINEPTAAAIAYGLDKKVGAERNVLIFDLGGGTFDVSILTIED 214
Query: 67 GVFEVLSTNGDTHLGGEDFDQRVMEYFXXXXXXXXXXXXXXXXRAIGXXXXXXXXXXXXX 126
G+FEV ST GDTHLGGEDFD R++ +F RA+
Sbjct: 215 GIFEVKSTAGDTHLGGEDFDNRMVNHFIAEFKRKHKKDISENKRAVRRLRTACERAKRTL 274
Query: 127 XXQHQVRVEIESLFDGIDFSEPLTRARFEELNNDLFRKTMGPVKKAMEDAGLEKNQIDEI 186
Q +EI+SL++GIDF +TRARFEELN DLFR T+ PV+KA+ DA L+K+QI +I
Sbjct: 275 SSSTQASIEIDSLYEGIDFYTSITRARFEELNADLFRGTLDPVEKALRDAKLDKSQIHDI 334
Query: 187 VLVGGSTRIPKVQQLLKDYFDGKEPNKGVNPDEAVAYGAAVQGGILS 233
VLVGGSTRIPK+Q+LL+D+F+GKE NK +NPDEAVAYGAAVQ ILS
Sbjct: 335 VLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILS 381
>pdb|1KAZ|A Chain A, 70kd Heat Shock Cognate Protein Atpase Domain, K71e Mutant
Length = 381
Score = 287 bits (735), Expect = 9e-78, Method: Compositional matrix adjust.
Identities = 143/227 (62%), Positives = 170/227 (74%), Gaps = 1/227 (0%)
Query: 8 RQATKDAGIIAGLNVARIINEPTAAAIAYGLDKK-GGEKNILVFDLGGGTFDVSILTIDN 66
RQATKDAG IAGLNV RIINEPTAAAIAYGLDKK G E+N+L+FDLGGGTFDVSILTI++
Sbjct: 155 RQATKDAGTIAGLNVLRIINEPTAAAIAYGLDKKVGAERNVLIFDLGGGTFDVSILTIED 214
Query: 67 GVFEVLSTNGDTHLGGEDFDQRVMEYFXXXXXXXXXXXXXXXXRAIGXXXXXXXXXXXXX 126
G+FEV ST GDTHLGGEDFD R++ +F RA+
Sbjct: 215 GIFEVKSTAGDTHLGGEDFDNRMVNHFIAEFKRKHKKDISENKRAVRRLRTACERAKRTL 274
Query: 127 XXQHQVRVEIESLFDGIDFSEPLTRARFEELNNDLFRKTMGPVKKAMEDAGLEKNQIDEI 186
Q +EI+SL++GIDF +TRARFEELN DLFR T+ PV+KA+ DA L+K+QI +I
Sbjct: 275 SSSTQASIEIDSLYEGIDFYTSITRARFEELNADLFRGTLDPVEKALRDAKLDKSQIHDI 334
Query: 187 VLVGGSTRIPKVQQLLKDYFDGKEPNKGVNPDEAVAYGAAVQGGILS 233
VLVGGSTRIPK+Q+LL+D+F+GKE NK +NPDEAVAYGAAVQ ILS
Sbjct: 335 VLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILS 381
>pdb|1BA0|A Chain A, Heat-Shock Cognate 70kd Protein 44kd Atpase N-Terminal
1nge 3
Length = 386
Score = 287 bits (735), Expect = 9e-78, Method: Compositional matrix adjust.
Identities = 143/229 (62%), Positives = 171/229 (74%), Gaps = 1/229 (0%)
Query: 8 RQATKDAGIIAGLNVARIINEPTAAAIAYGLDKK-GGEKNILVFDLGGGTFDVSILTIDN 66
RQATKDAG IAGLNV RIINEPTAAAIAYGLDKK G E+N+L+FDLGGGTF VSILTI++
Sbjct: 155 RQATKDAGTIAGLNVLRIINEPTAAAIAYGLDKKVGAERNVLIFDLGGGTFKVSILTIED 214
Query: 67 GVFEVLSTNGDTHLGGEDFDQRVMEYFXXXXXXXXXXXXXXXXRAIGXXXXXXXXXXXXX 126
G+FEV ST GDTHLGGEDFD R++ +F RA+
Sbjct: 215 GIFEVKSTAGDTHLGGEDFDNRMVNHFIAEFKRKHKKDISENKRAVRRLRTACERAKRTL 274
Query: 127 XXQHQVRVEIESLFDGIDFSEPLTRARFEELNNDLFRKTMGPVKKAMEDAGLEKNQIDEI 186
Q +EI+SL++GIDF +TRARFEELN DLFR T+ PV+KA+ DA L+K+QI +I
Sbjct: 275 SSSTQASIEIDSLYEGIDFYTSITRARFEELNADLFRGTLDPVEKALRDAKLDKSQIHDI 334
Query: 187 VLVGGSTRIPKVQQLLKDYFDGKEPNKGVNPDEAVAYGAAVQGGILSGE 235
VLVGGSTRIPK+Q+LL+D+F+GKE NK +NPDEAVAYGAAVQ ILSG+
Sbjct: 335 VLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILSGD 383
>pdb|1KAY|A Chain A, 70kd Heat Shock Cognate Protein Atpase Domain, K71a Mutant
Length = 381
Score = 287 bits (734), Expect = 9e-78, Method: Compositional matrix adjust.
Identities = 143/227 (62%), Positives = 170/227 (74%), Gaps = 1/227 (0%)
Query: 8 RQATKDAGIIAGLNVARIINEPTAAAIAYGLDKK-GGEKNILVFDLGGGTFDVSILTIDN 66
RQATKDAG IAGLNV RIINEPTAAAIAYGLDKK G E+N+L+FDLGGGTFDVSILTI++
Sbjct: 155 RQATKDAGTIAGLNVLRIINEPTAAAIAYGLDKKVGAERNVLIFDLGGGTFDVSILTIED 214
Query: 67 GVFEVLSTNGDTHLGGEDFDQRVMEYFXXXXXXXXXXXXXXXXRAIGXXXXXXXXXXXXX 126
G+FEV ST GDTHLGGEDFD R++ +F RA+
Sbjct: 215 GIFEVKSTAGDTHLGGEDFDNRMVNHFIAEFKRKHKKDISENKRAVRRLRTACERAKRTL 274
Query: 127 XXQHQVRVEIESLFDGIDFSEPLTRARFEELNNDLFRKTMGPVKKAMEDAGLEKNQIDEI 186
Q +EI+SL++GIDF +TRARFEELN DLFR T+ PV+KA+ DA L+K+QI +I
Sbjct: 275 SSSTQASIEIDSLYEGIDFYTSITRARFEELNADLFRGTLDPVEKALRDAKLDKSQIHDI 334
Query: 187 VLVGGSTRIPKVQQLLKDYFDGKEPNKGVNPDEAVAYGAAVQGGILS 233
VLVGGSTRIPK+Q+LL+D+F+GKE NK +NPDEAVAYGAAVQ ILS
Sbjct: 335 VLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILS 381
>pdb|1HX1|A Chain A, Crystal Structure Of A Bag Domain In Complex With The
Hsc70 Atpase Domain
Length = 400
Score = 287 bits (734), Expect = 9e-78, Method: Compositional matrix adjust.
Identities = 143/227 (62%), Positives = 170/227 (74%), Gaps = 1/227 (0%)
Query: 8 RQATKDAGIIAGLNVARIINEPTAAAIAYGLDKK-GGEKNILVFDLGGGTFDVSILTIDN 66
RQATKDAG IAGLNV RIINEPTAAAIAYGLDKK G E+N+L+FDLGGGTFDVSILTI++
Sbjct: 174 RQATKDAGTIAGLNVLRIINEPTAAAIAYGLDKKVGAERNVLIFDLGGGTFDVSILTIED 233
Query: 67 GVFEVLSTNGDTHLGGEDFDQRVMEYFXXXXXXXXXXXXXXXXRAIGXXXXXXXXXXXXX 126
G+FEV ST GDTHLGGEDFD R++ +F RA+
Sbjct: 234 GIFEVKSTAGDTHLGGEDFDNRMVNHFIAEFKRKHKKDISENKRAVRRLRTACERAKRTL 293
Query: 127 XXQHQVRVEIESLFDGIDFSEPLTRARFEELNNDLFRKTMGPVKKAMEDAGLEKNQIDEI 186
Q +EI+SL++GIDF +TRARFEELN DLFR T+ PV+KA+ DA L+K+QI +I
Sbjct: 294 SSSTQASIEIDSLYEGIDFYTSITRARFEELNADLFRGTLDPVEKALRDAKLDKSQIHDI 353
Query: 187 VLVGGSTRIPKVQQLLKDYFDGKEPNKGVNPDEAVAYGAAVQGGILS 233
VLVGGSTRIPK+Q+LL+D+F+GKE NK +NPDEAVAYGAAVQ ILS
Sbjct: 354 VLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILS 400
>pdb|1ATS|A Chain A, Threonine 204 Of The Chaperone Protein Hsc70 Influences
The Structure Of The Active Site But Is Not Essential
For Atp Hydrolysis
Length = 386
Score = 287 bits (734), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 143/229 (62%), Positives = 171/229 (74%), Gaps = 1/229 (0%)
Query: 8 RQATKDAGIIAGLNVARIINEPTAAAIAYGLDKK-GGEKNILVFDLGGGTFDVSILTIDN 66
RQATKDAG IAGLNV RIINEPTAAAIAYGLDKK G E+N+L+FDLGGG FDVSILTI++
Sbjct: 155 RQATKDAGTIAGLNVLRIINEPTAAAIAYGLDKKVGAERNVLIFDLGGGEFDVSILTIED 214
Query: 67 GVFEVLSTNGDTHLGGEDFDQRVMEYFXXXXXXXXXXXXXXXXRAIGXXXXXXXXXXXXX 126
G+FEV ST GDTHLGGEDFD R++ +F RA+
Sbjct: 215 GIFEVKSTAGDTHLGGEDFDNRMVNHFIAEFKRKHKKDISENKRAVRRLRTACERAKRTL 274
Query: 127 XXQHQVRVEIESLFDGIDFSEPLTRARFEELNNDLFRKTMGPVKKAMEDAGLEKNQIDEI 186
Q +EI+SL++GIDF +TRARFEELN DLFR T+ PV+KA+ DA L+K+QI +I
Sbjct: 275 SSSTQASIEIDSLYEGIDFYTSITRARFEELNADLFRGTLDPVEKALRDAKLDKSQIHDI 334
Query: 187 VLVGGSTRIPKVQQLLKDYFDGKEPNKGVNPDEAVAYGAAVQGGILSGE 235
VLVGGSTRIPK+Q+LL+D+F+GKE NK +NPDEAVAYGAAVQ ILSG+
Sbjct: 335 VLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILSGD 383
>pdb|2BUP|A Chain A, T13g Mutant Of The Atpase Fragment Of Bovine Hsc70
Length = 381
Score = 287 bits (734), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 143/227 (62%), Positives = 170/227 (74%), Gaps = 1/227 (0%)
Query: 8 RQATKDAGIIAGLNVARIINEPTAAAIAYGLDKK-GGEKNILVFDLGGGTFDVSILTIDN 66
RQATKDAG IAGLNV RIINEPTAAAIAYGLDKK G E+N+L+FDLGGGTFDVSILTI++
Sbjct: 155 RQATKDAGTIAGLNVLRIINEPTAAAIAYGLDKKVGAERNVLIFDLGGGTFDVSILTIED 214
Query: 67 GVFEVLSTNGDTHLGGEDFDQRVMEYFXXXXXXXXXXXXXXXXRAIGXXXXXXXXXXXXX 126
G+FEV ST GDTHLGGEDFD R++ +F RA+
Sbjct: 215 GIFEVKSTAGDTHLGGEDFDNRMVNHFIAEFKRKHKKDISENKRAVRRLRTACERAKRTL 274
Query: 127 XXQHQVRVEIESLFDGIDFSEPLTRARFEELNNDLFRKTMGPVKKAMEDAGLEKNQIDEI 186
Q +EI+SL++GIDF +TRARFEELN DLFR T+ PV+KA+ DA L+K+QI +I
Sbjct: 275 SSSTQASIEIDSLYEGIDFYTSITRARFEELNADLFRGTLDPVEKALRDAKLDKSQIHDI 334
Query: 187 VLVGGSTRIPKVQQLLKDYFDGKEPNKGVNPDEAVAYGAAVQGGILS 233
VLVGGSTRIPK+Q+LL+D+F+GKE NK +NPDEAVAYGAAVQ ILS
Sbjct: 335 VLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILS 381
>pdb|3FZF|A Chain A, Crystal Structure Of Hsc70BAG1 IN COMPLEX WITH ATP
pdb|3FZH|A Chain A, Crystal Structures Of Hsc70BAG1 IN COMPLEX WITH SMALL
Molecule Inhibitors
pdb|3FZK|A Chain A, Crystal Structures Of Hsc70BAG1 IN COMPLEX WITH SMALL
Molecule Inhibitors
pdb|3FZL|A Chain A, Crystal Structures Of Hsc70BAG1 IN COMPLEX WITH SMALL
Molecule Inhibitors
pdb|3FZM|A Chain A, Crystal Structures Of Hsc70BAG1 IN COMPLEX WITH SMALL
Molecule Inhibitors
pdb|3LDQ|A Chain A, Crystal Structure Of Hsc70BAG1 IN COMPLEX WITH SMALL
MOLECULE Inhibitor
pdb|3M3Z|A Chain A, Crystal Structure Of Hsc70/bag1 In Complex With Small
Molecule Inhibitor
Length = 381
Score = 287 bits (734), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 143/227 (62%), Positives = 170/227 (74%), Gaps = 1/227 (0%)
Query: 8 RQATKDAGIIAGLNVARIINEPTAAAIAYGLDKK-GGEKNILVFDLGGGTFDVSILTIDN 66
RQATKDAG IAGLNV RIINEPTAAAIAYGLDKK G E+N+L+FDLGGGTFDVSILTI++
Sbjct: 155 RQATKDAGTIAGLNVLRIINEPTAAAIAYGLDKKVGAERNVLIFDLGGGTFDVSILTIED 214
Query: 67 GVFEVLSTNGDTHLGGEDFDQRVMEYFXXXXXXXXXXXXXXXXRAIGXXXXXXXXXXXXX 126
G+FEV ST GDTHLGGEDFD R++ +F RA+
Sbjct: 215 GIFEVKSTAGDTHLGGEDFDNRMVNHFIAEFKRKHKKDISENKRAVRRLRTACERAKRTL 274
Query: 127 XXQHQVRVEIESLFDGIDFSEPLTRARFEELNNDLFRKTMGPVKKAMEDAGLEKNQIDEI 186
Q +EI+SL++GIDF +TRARFEELN DLFR T+ PV+KA+ DA L+K+QI +I
Sbjct: 275 SSSTQASIEIDSLYEGIDFYTSITRARFEELNADLFRGTLDPVEKALRDAKLDKSQIHDI 334
Query: 187 VLVGGSTRIPKVQQLLKDYFDGKEPNKGVNPDEAVAYGAAVQGGILS 233
VLVGGSTRIPK+Q+LL+D+F+GKE NK +NPDEAVAYGAAVQ ILS
Sbjct: 335 VLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILS 381
>pdb|3CQX|A Chain A, Chaperone Complex
pdb|3CQX|B Chain B, Chaperone Complex
Length = 386
Score = 287 bits (734), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 143/227 (62%), Positives = 170/227 (74%), Gaps = 1/227 (0%)
Query: 8 RQATKDAGIIAGLNVARIINEPTAAAIAYGLDKK-GGEKNILVFDLGGGTFDVSILTIDN 66
RQATKDAG IAGLNV RIINEPTAAAIAYGLDKK G E+N+L+FDLGGGTFDVSILTI++
Sbjct: 160 RQATKDAGTIAGLNVLRIINEPTAAAIAYGLDKKVGAERNVLIFDLGGGTFDVSILTIED 219
Query: 67 GVFEVLSTNGDTHLGGEDFDQRVMEYFXXXXXXXXXXXXXXXXRAIGXXXXXXXXXXXXX 126
G+FEV ST GDTHLGGEDFD R++ +F RA+
Sbjct: 220 GIFEVKSTAGDTHLGGEDFDNRMVNHFIAEFKRKHKKDISENKRAVRRLRTACERAKRTL 279
Query: 127 XXQHQVRVEIESLFDGIDFSEPLTRARFEELNNDLFRKTMGPVKKAMEDAGLEKNQIDEI 186
Q +EI+SL++GIDF +TRARFEELN DLFR T+ PV+KA+ DA L+K+QI +I
Sbjct: 280 SSSTQASIEIDSLYEGIDFYTSITRARFEELNADLFRGTLDPVEKALRDAKLDKSQIHDI 339
Query: 187 VLVGGSTRIPKVQQLLKDYFDGKEPNKGVNPDEAVAYGAAVQGGILS 233
VLVGGSTRIPK+Q+LL+D+F+GKE NK +NPDEAVAYGAAVQ ILS
Sbjct: 340 VLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILS 386
>pdb|2E8A|A Chain A, Crystal Structure Of The Human Hsp70 Atpase Domain In
Complex With Amp-Pnp
Length = 391
Score = 283 bits (725), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 140/229 (61%), Positives = 171/229 (74%), Gaps = 1/229 (0%)
Query: 8 RQATKDAGIIAGLNVARIINEPTAAAIAYGLDKKG-GEKNILVFDLGGGTFDVSILTIDN 66
RQATKDAG+IAGLNV RIINEPTAAAIAYGLD+ G GE+N+L+FDLGGGTFDVSILTID+
Sbjct: 158 RQATKDAGVIAGLNVLRIINEPTAAAIAYGLDRTGKGERNVLIFDLGGGTFDVSILTIDD 217
Query: 67 GVFEVLSTNGDTHLGGEDFDQRVMEYFXXXXXXXXXXXXXXXXRAIGXXXXXXXXXXXXX 126
G+FEV +T GDTHLGGEDFD R++ +F RA+
Sbjct: 218 GIFEVKATAGDTHLGGEDFDNRLVNHFVEEFKRKHKKDISQNKRAVRRLRTACERAKRTL 277
Query: 127 XXQHQVRVEIESLFDGIDFSEPLTRARFEELNNDLFRKTMGPVKKAMEDAGLEKNQIDEI 186
Q +EI+SLF+GIDF +TRARFEEL +DLFR T+ PV+KA+ DA L+K QI ++
Sbjct: 278 SSSTQASLEIDSLFEGIDFYTSITRARFEELCSDLFRSTLEPVEKALRDAKLDKAQIHDL 337
Query: 187 VLVGGSTRIPKVQQLLKDYFDGKEPNKGVNPDEAVAYGAAVQGGILSGE 235
VLVGGSTRIPKVQ+LL+D+F+G++ NK +NPDEAVAYGAAVQ IL G+
Sbjct: 338 VLVGGSTRIPKVQKLLQDFFNGRDLNKSINPDEAVAYGAAVQAAILMGD 386
>pdb|2E88|A Chain A, Crystal Structure Of The Human Hsp70 Atpase Domain In The
Apo Form
Length = 391
Score = 283 bits (725), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 140/229 (61%), Positives = 171/229 (74%), Gaps = 1/229 (0%)
Query: 8 RQATKDAGIIAGLNVARIINEPTAAAIAYGLDKKG-GEKNILVFDLGGGTFDVSILTIDN 66
RQATKDAG+IAGLNV RIINEPTAAAIAYGLD+ G GE+N+L+FDLGGGTFDVSILTID+
Sbjct: 158 RQATKDAGVIAGLNVLRIINEPTAAAIAYGLDRTGKGERNVLIFDLGGGTFDVSILTIDD 217
Query: 67 GVFEVLSTNGDTHLGGEDFDQRVMEYFXXXXXXXXXXXXXXXXRAIGXXXXXXXXXXXXX 126
G+FEV +T GDTHLGGEDFD R++ +F RA+
Sbjct: 218 GIFEVKATAGDTHLGGEDFDNRLVNHFVEEFKRKHKKDISQNKRAVRRLRTACERAKRTL 277
Query: 127 XXQHQVRVEIESLFDGIDFSEPLTRARFEELNNDLFRKTMGPVKKAMEDAGLEKNQIDEI 186
Q +EI+SLF+GIDF +TRARFEEL +DLFR T+ PV+KA+ DA L+K QI ++
Sbjct: 278 SSSTQASLEIDSLFEGIDFYTSITRARFEELCSDLFRSTLEPVEKALRDAKLDKAQIHDL 337
Query: 187 VLVGGSTRIPKVQQLLKDYFDGKEPNKGVNPDEAVAYGAAVQGGILSGE 235
VLVGGSTRIPKVQ+LL+D+F+G++ NK +NPDEAVAYGAAVQ IL G+
Sbjct: 338 VLVGGSTRIPKVQKLLQDFFNGRDLNKSINPDEAVAYGAAVQAAILMGD 386
>pdb|1QQN|A Chain A, D206s Mutant Of Bovine 70 Kilodalton Heat Shock Protein
Length = 378
Score = 283 bits (725), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 141/227 (62%), Positives = 168/227 (74%), Gaps = 1/227 (0%)
Query: 8 RQATKDAGIIAGLNVARIINEPTAAAIAYGLDKK-GGEKNILVFDLGGGTFDVSILTIDN 66
RQATKDAG IAGLNV RIINEPTAAAIAYGLDK G E+N+L+FDLGGGTF VSILTI++
Sbjct: 152 RQATKDAGTIAGLNVLRIINEPTAAAIAYGLDKAVGAERNVLIFDLGGGTFSVSILTIED 211
Query: 67 GVFEVLSTNGDTHLGGEDFDQRVMEYFXXXXXXXXXXXXXXXXRAIGXXXXXXXXXXXXX 126
G+FEV ST GDTHLGGEDFD R++ +F RA+
Sbjct: 212 GIFEVKSTAGDTHLGGEDFDNRMVNHFIAEFKRAHAKDISENKRAVRRLATACERAKRTL 271
Query: 127 XXQHQVRVEIESLFDGIDFSEPLTRARFEELNNDLFRKTMGPVKKAMEDAGLEKNQIDEI 186
Q +EI+SL++GIDF +TRARFEELN DLFR T+ PV+KA+ DA L+K+QI +I
Sbjct: 272 SSSTQASIEIDSLYEGIDFYTSITRARFEELNADLFRGTLDPVEKALRDAKLDKSQIHDI 331
Query: 187 VLVGGSTRIPKVQQLLKDYFDGKEPNKGVNPDEAVAYGAAVQGGILS 233
VLVGGSTRIPK+Q+LL+D+F+GKE NK +NPDEAVAYGAAVQ ILS
Sbjct: 332 VLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILS 378
>pdb|3JXU|A Chain A, Crystal Structure Of The Human 70kda Heat Shock Protein 1a
(Hsp70-1) Atpase Domain In Complex With Adp And
Inorganic Phosphate
Length = 409
Score = 283 bits (724), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 140/229 (61%), Positives = 171/229 (74%), Gaps = 1/229 (0%)
Query: 8 RQATKDAGIIAGLNVARIINEPTAAAIAYGLDKKG-GEKNILVFDLGGGTFDVSILTIDN 66
RQATKDAG+IAGLNV RIINEPTAAAIAYGLD+ G GE+N+L+FDLGGGTFDVSILTID+
Sbjct: 177 RQATKDAGVIAGLNVLRIINEPTAAAIAYGLDRTGKGERNVLIFDLGGGTFDVSILTIDD 236
Query: 67 GVFEVLSTNGDTHLGGEDFDQRVMEYFXXXXXXXXXXXXXXXXRAIGXXXXXXXXXXXXX 126
G+FEV +T GDTHLGGEDFD R++ +F RA+
Sbjct: 237 GIFEVKATAGDTHLGGEDFDNRLVNHFVEEFKRKHKKDISQNKRAVRRLRTACERAKRTL 296
Query: 127 XXQHQVRVEIESLFDGIDFSEPLTRARFEELNNDLFRKTMGPVKKAMEDAGLEKNQIDEI 186
Q +EI+SLF+GIDF +TRARFEEL +DLFR T+ PV+KA+ DA L+K QI ++
Sbjct: 297 SSSTQASLEIDSLFEGIDFYTSITRARFEELCSDLFRSTLEPVEKALRDAKLDKAQIHDL 356
Query: 187 VLVGGSTRIPKVQQLLKDYFDGKEPNKGVNPDEAVAYGAAVQGGILSGE 235
VLVGGSTRIPKVQ+LL+D+F+G++ NK +NPDEAVAYGAAVQ IL G+
Sbjct: 357 VLVGGSTRIPKVQKLLQDFFNGRDLNKSINPDEAVAYGAAVQAAILMGD 405
>pdb|3A8Y|A Chain A, Crystal Structure Of The Complex Between The Bag5 Bd5 And
Hsp70 Nbd
pdb|3A8Y|B Chain B, Crystal Structure Of The Complex Between The Bag5 Bd5 And
Hsp70 Nbd
pdb|3ATU|A Chain A, Crystal Structure Of Human Hsp70 Nbd In The Adp- And Mg
Ion-Bound State
pdb|3ATV|A Chain A, Crystal Structure Of Human Hsp70 Nbd In The Adp-Bound And
Mg Ion-Free State
pdb|3AY9|A Chain A, Crystal Structure Of Human Hsp70 Nbd In The Adp-, Mg Ion-,
And K Ion- Bound State
Length = 392
Score = 283 bits (724), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 140/229 (61%), Positives = 171/229 (74%), Gaps = 1/229 (0%)
Query: 8 RQATKDAGIIAGLNVARIINEPTAAAIAYGLDKKG-GEKNILVFDLGGGTFDVSILTIDN 66
RQATKDAG+IAGLNV RIINEPTAAAIAYGLD+ G GE+N+L+FDLGGGTFDVSILTID+
Sbjct: 159 RQATKDAGVIAGLNVLRIINEPTAAAIAYGLDRTGKGERNVLIFDLGGGTFDVSILTIDD 218
Query: 67 GVFEVLSTNGDTHLGGEDFDQRVMEYFXXXXXXXXXXXXXXXXRAIGXXXXXXXXXXXXX 126
G+FEV +T GDTHLGGEDFD R++ +F RA+
Sbjct: 219 GIFEVKATAGDTHLGGEDFDNRLVNHFVEEFKRKHKKDISQNKRAVRRLRTACERAKRTL 278
Query: 127 XXQHQVRVEIESLFDGIDFSEPLTRARFEELNNDLFRKTMGPVKKAMEDAGLEKNQIDEI 186
Q +EI+SLF+GIDF +TRARFEEL +DLFR T+ PV+KA+ DA L+K QI ++
Sbjct: 279 SSSTQASLEIDSLFEGIDFYTSITRARFEELCSDLFRSTLEPVEKALRDAKLDKAQIHDL 338
Query: 187 VLVGGSTRIPKVQQLLKDYFDGKEPNKGVNPDEAVAYGAAVQGGILSGE 235
VLVGGSTRIPKVQ+LL+D+F+G++ NK +NPDEAVAYGAAVQ IL G+
Sbjct: 339 VLVGGSTRIPKVQKLLQDFFNGRDLNKSINPDEAVAYGAAVQAAILMGD 387
>pdb|3I33|A Chain A, Crystal Structure Of The Human 70kda Heat Shock Protein 2
(Hsp70-2) Atpase Domain In Complex With Adp And
Inorganic Phosphate
Length = 404
Score = 283 bits (724), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 143/231 (61%), Positives = 169/231 (73%), Gaps = 3/231 (1%)
Query: 8 RQATKDAGIIAGLNVARIINEPTAAAIAYGLDKKG---GEKNILVFDLGGGTFDVSILTI 64
RQATKDAG I GLNV RIINEPTAAAIAYGLDKKG GEKN+L+FDLGGGTFDVSILTI
Sbjct: 174 RQATKDAGTITGLNVLRIINEPTAAAIAYGLDKKGCAGGEKNVLIFDLGGGTFDVSILTI 233
Query: 65 DNGVFEVLSTNGDTHLGGEDFDQRVMEYFXXXXXXXXXXXXXXXXRAIGXXXXXXXXXXX 124
++G+FEV ST GDTHLGGEDFD R++ + RA+
Sbjct: 234 EDGIFEVKSTAGDTHLGGEDFDNRMVSHLAEEFKRKHKKDIGPNKRAVRRLRTACERAKR 293
Query: 125 XXXXQHQVRVEIESLFDGIDFSEPLTRARFEELNNDLFRKTMGPVKKAMEDAGLEKNQID 184
Q +EI+SL++G+DF +TRARFEELN DLFR T+ PV+KA+ DA L+K QI
Sbjct: 294 TLSSSTQASIEIDSLYEGVDFYTSITRARFEELNADLFRGTLEPVEKALRDAKLDKGQIQ 353
Query: 185 EIVLVGGSTRIPKVQQLLKDYFDGKEPNKGVNPDEAVAYGAAVQGGILSGE 235
EIVLVGGSTRIPK+Q+LL+D+F+GKE NK +NPDEAVAYGAAVQ IL G+
Sbjct: 354 EIVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILIGD 404
>pdb|3D2E|B Chain B, Crystal Structure Of A Complex Of Sse1p And Hsp70,
Selenomethionine- Labeled Crystals
pdb|3D2E|D Chain D, Crystal Structure Of A Complex Of Sse1p And Hsp70,
Selenomethionine- Labeled Crystals
Length = 382
Score = 283 bits (724), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 140/228 (61%), Positives = 170/228 (74%), Gaps = 1/228 (0%)
Query: 8 RQATKDAGIIAGLNVARIINEPTAAAIAYGLDKKG-GEKNILVFDLGGGTFDVSILTIDN 66
RQATKDAG+IAGLNV RIINEPTAAAIAYGLD+ G GE+N+L+FDLGGGTFDVSILTID+
Sbjct: 155 RQATKDAGVIAGLNVLRIINEPTAAAIAYGLDRTGKGERNVLIFDLGGGTFDVSILTIDD 214
Query: 67 GVFEVLSTNGDTHLGGEDFDQRVMEYFXXXXXXXXXXXXXXXXRAIGXXXXXXXXXXXXX 126
G+FEV +T GDTHLGGEDFD R++ +F RA+
Sbjct: 215 GIFEVKATAGDTHLGGEDFDNRLVNHFVEEFKRKHKKDISQNKRAVRRLRTACERAKRTL 274
Query: 127 XXQHQVRVEIESLFDGIDFSEPLTRARFEELNNDLFRKTMGPVKKAMEDAGLEKNQIDEI 186
Q +EI+SLF+GIDF +TRARFEEL +DLFR T+ PV+KA+ DA L+K QI ++
Sbjct: 275 SSSTQASLEIDSLFEGIDFYTSITRARFEELCSDLFRSTLEPVEKALRDAKLDKAQIHDL 334
Query: 187 VLVGGSTRIPKVQQLLKDYFDGKEPNKGVNPDEAVAYGAAVQGGILSG 234
VLVGGSTRIPKVQ+LL+D+F+G++ NK +NPDEAVAYGAAVQ IL G
Sbjct: 335 VLVGGSTRIPKVQKLLQDFFNGRDLNKSINPDEAVAYGAAVQAAILXG 382
>pdb|1QQM|A Chain A, D199s Mutant Of Bovine 70 Kilodalton Heat Shock Protein
Length = 378
Score = 283 bits (724), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 141/227 (62%), Positives = 168/227 (74%), Gaps = 1/227 (0%)
Query: 8 RQATKDAGIIAGLNVARIINEPTAAAIAYGLDKK-GGEKNILVFDLGGGTFDVSILTIDN 66
RQATKDAG IAGLNV RIINEPTAAAIAYGLDK G E+N+L+F LGGGTFDVSILTI++
Sbjct: 152 RQATKDAGTIAGLNVLRIINEPTAAAIAYGLDKAVGAERNVLIFSLGGGTFDVSILTIED 211
Query: 67 GVFEVLSTNGDTHLGGEDFDQRVMEYFXXXXXXXXXXXXXXXXRAIGXXXXXXXXXXXXX 126
G+FEV ST GDTHLGGEDFD R++ +F RA+
Sbjct: 212 GIFEVKSTAGDTHLGGEDFDNRMVNHFIAEFKRAHAKDISENKRAVRRLRTACERAKRTL 271
Query: 127 XXQHQVRVEIESLFDGIDFSEPLTRARFEELNNDLFRKTMGPVKKAMEDAGLEKNQIDEI 186
Q +EI+SL++GIDF +TRARFEELN DLFR T+ PV+KA+ DA L+K+QI +I
Sbjct: 272 SSSTQASIEIDSLYEGIDFYTSITRARFEELNADLFRGTLDPVEKALRDAKLDKSQIHDI 331
Query: 187 VLVGGSTRIPKVQQLLKDYFDGKEPNKGVNPDEAVAYGAAVQGGILS 233
VLVGGSTRIPK+Q+LL+D+F+GKE NK +NPDEAVAYGAAVQ ILS
Sbjct: 332 VLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILS 378
>pdb|1QQO|A Chain A, E175s Mutant Of Bovine 70 Kilodalton Heat Shock Protein
Length = 378
Score = 283 bits (724), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 141/227 (62%), Positives = 168/227 (74%), Gaps = 1/227 (0%)
Query: 8 RQATKDAGIIAGLNVARIINEPTAAAIAYGLDKK-GGEKNILVFDLGGGTFDVSILTIDN 66
RQATKDAG IAGLNV RIIN PTAAAIAYGLDK G E+N+L+FDLGGGTFDVSILTI++
Sbjct: 152 RQATKDAGTIAGLNVLRIINSPTAAAIAYGLDKAVGAERNVLIFDLGGGTFDVSILTIED 211
Query: 67 GVFEVLSTNGDTHLGGEDFDQRVMEYFXXXXXXXXXXXXXXXXRAIGXXXXXXXXXXXXX 126
G+FEV ST GDTHLGGEDFD R++ +F RA+
Sbjct: 212 GIFEVKSTAGDTHLGGEDFDNRMVNHFIAEFKRKHKKDISENKRAVRRLRTACERAKRTL 271
Query: 127 XXQHQVRVEIESLFDGIDFSEPLTRARFEELNNDLFRKTMGPVKKAMEDAGLEKNQIDEI 186
Q +EI+SL++GIDF +TRARFEELN DLFR T+ PV+KA+ DA L+K+QI +I
Sbjct: 272 SSSTQASIEIDSLYEGIDFYTSITRARFEELNADLFRGTLDPVEKALRDAKLDKSQIHDI 331
Query: 187 VLVGGSTRIPKVQQLLKDYFDGKEPNKGVNPDEAVAYGAAVQGGILS 233
VLVGGSTRIPK+Q+LL+D+F+GKE NK +NPDEAVAYGAAVQ ILS
Sbjct: 332 VLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILS 378
>pdb|3QFP|A Chain A, Crystal Structure Of Yeast Hsp70 (BipKAR2) ATPASE DOMAIN
pdb|3QML|A Chain A, The Structural Analysis Of Sil1-Bip Complex Reveals The
Mechanism For Sil1 To Function As A Novel Nucleotide
Exchange Factor
pdb|3QML|B Chain B, The Structural Analysis Of Sil1-Bip Complex Reveals The
Mechanism For Sil1 To Function As A Novel Nucleotide
Exchange Factor
Length = 390
Score = 283 bits (723), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 138/226 (61%), Positives = 167/226 (73%)
Query: 8 RQATKDAGIIAGLNVARIINEPTAAAIAYGLDKKGGEKNILVFDLGGGTFDVSILTIDNG 67
RQATKDAG IAGLNV RI+NEPTAAAIAYGLDK E I+V+DLGGGTFDVS+L+I+NG
Sbjct: 165 RQATKDAGTIAGLNVLRIVNEPTAAAIAYGLDKSDKEHQIIVYDLGGGTFDVSLLSIENG 224
Query: 68 VFEVLSTNGDTHLGGEDFDQRVMEYFXXXXXXXXXXXXXXXXRAIGXXXXXXXXXXXXXX 127
VFEV +T+GDTHLGGEDFD +++ +A+
Sbjct: 225 VFEVQATSGDTHLGGEDFDYKIVRQLIKAFKKKHGIDVSDNNKALAKLKREAEKAKRALS 284
Query: 128 XQHQVRVEIESLFDGIDFSEPLTRARFEELNNDLFRKTMGPVKKAMEDAGLEKNQIDEIV 187
Q R+EI+S DGID SE LTRA+FEELN DLF+KT+ PV+K ++D+GLEK +D+IV
Sbjct: 285 SQMSTRIEIDSFVDGIDLSETLTRAKFEELNLDLFKKTLKPVEKVLQDSGLEKKDVDDIV 344
Query: 188 LVGGSTRIPKVQQLLKDYFDGKEPNKGVNPDEAVAYGAAVQGGILS 233
LVGGSTRIPKVQQLL+ YFDGK+ +KG+NPDEAVAYGAAVQ G+LS
Sbjct: 345 LVGGSTRIPKVQQLLESYFDGKKASKGINPDEAVAYGAAVQAGVLS 390
>pdb|3QFU|A Chain A, Crystal Structure Of Yeast Hsp70 (BipKAR2) COMPLEXED WITH
ADP
Length = 394
Score = 283 bits (723), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 138/226 (61%), Positives = 167/226 (73%)
Query: 8 RQATKDAGIIAGLNVARIINEPTAAAIAYGLDKKGGEKNILVFDLGGGTFDVSILTIDNG 67
RQATKDAG IAGLNV RI+NEPTAAAIAYGLDK E I+V+DLGGGTFDVS+L+I+NG
Sbjct: 169 RQATKDAGTIAGLNVLRIVNEPTAAAIAYGLDKSDKEHQIIVYDLGGGTFDVSLLSIENG 228
Query: 68 VFEVLSTNGDTHLGGEDFDQRVMEYFXXXXXXXXXXXXXXXXRAIGXXXXXXXXXXXXXX 127
VFEV +T+GDTHLGGEDFD +++ +A+
Sbjct: 229 VFEVQATSGDTHLGGEDFDYKIVRQLIKAFKKKHGIDVSDNNKALAKLKREAEKAKRALS 288
Query: 128 XQHQVRVEIESLFDGIDFSEPLTRARFEELNNDLFRKTMGPVKKAMEDAGLEKNQIDEIV 187
Q R+EI+S DGID SE LTRA+FEELN DLF+KT+ PV+K ++D+GLEK +D+IV
Sbjct: 289 SQMSTRIEIDSFVDGIDLSETLTRAKFEELNLDLFKKTLKPVEKVLQDSGLEKKDVDDIV 348
Query: 188 LVGGSTRIPKVQQLLKDYFDGKEPNKGVNPDEAVAYGAAVQGGILS 233
LVGGSTRIPKVQQLL+ YFDGK+ +KG+NPDEAVAYGAAVQ G+LS
Sbjct: 349 LVGGSTRIPKVQQLLESYFDGKKASKGINPDEAVAYGAAVQAGVLS 394
>pdb|3D2F|B Chain B, Crystal Structure Of A Complex Of Sse1p And Hsp70
pdb|3D2F|D Chain D, Crystal Structure Of A Complex Of Sse1p And Hsp70
Length = 382
Score = 283 bits (723), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 140/228 (61%), Positives = 170/228 (74%), Gaps = 1/228 (0%)
Query: 8 RQATKDAGIIAGLNVARIINEPTAAAIAYGLDKKG-GEKNILVFDLGGGTFDVSILTIDN 66
RQATKDAG+IAGLNV RIINEPTAAAIAYGLD+ G GE+N+L+FDLGGGTFDVSILTID+
Sbjct: 155 RQATKDAGVIAGLNVLRIINEPTAAAIAYGLDRTGKGERNVLIFDLGGGTFDVSILTIDD 214
Query: 67 GVFEVLSTNGDTHLGGEDFDQRVMEYFXXXXXXXXXXXXXXXXRAIGXXXXXXXXXXXXX 126
G+FEV +T GDTHLGGEDFD R++ +F RA+
Sbjct: 215 GIFEVKATAGDTHLGGEDFDNRLVNHFVEEFKRKHKKDISQNKRAVRRLRTACERAKRTL 274
Query: 127 XXQHQVRVEIESLFDGIDFSEPLTRARFEELNNDLFRKTMGPVKKAMEDAGLEKNQIDEI 186
Q +EI+SLF+GIDF +TRARFEEL +DLFR T+ PV+KA+ DA L+K QI ++
Sbjct: 275 SSSTQASLEIDSLFEGIDFYTSITRARFEELCSDLFRSTLEPVEKALRDAKLDKAQIHDL 334
Query: 187 VLVGGSTRIPKVQQLLKDYFDGKEPNKGVNPDEAVAYGAAVQGGILSG 234
VLVGGSTRIPKVQ+LL+D+F+G++ NK +NPDEAVAYGAAVQ IL G
Sbjct: 335 VLVGGSTRIPKVQKLLQDFFNGRDLNKSINPDEAVAYGAAVQAAILMG 382
>pdb|1S3X|A Chain A, The Crystal Structure Of The Human Hsp70 Atpase Domain
Length = 382
Score = 283 bits (723), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 140/228 (61%), Positives = 170/228 (74%), Gaps = 1/228 (0%)
Query: 8 RQATKDAGIIAGLNVARIINEPTAAAIAYGLDKKG-GEKNILVFDLGGGTFDVSILTIDN 66
RQATKDAG+IAGLNV RIINEPTAAAIAYGLD+ G GE+N+L+FDLGGGTFDVSILTID+
Sbjct: 155 RQATKDAGVIAGLNVLRIINEPTAAAIAYGLDRTGKGERNVLIFDLGGGTFDVSILTIDD 214
Query: 67 GVFEVLSTNGDTHLGGEDFDQRVMEYFXXXXXXXXXXXXXXXXRAIGXXXXXXXXXXXXX 126
G+FEV +T GDTHLGGEDFD R++ +F RA+
Sbjct: 215 GIFEVKATAGDTHLGGEDFDNRLVNHFVEEFKRKHKKDISQNKRAVRRLRTACERAKRTL 274
Query: 127 XXQHQVRVEIESLFDGIDFSEPLTRARFEELNNDLFRKTMGPVKKAMEDAGLEKNQIDEI 186
Q +EI+SLF+GIDF +TRARFEEL +DLFR T+ PV+KA+ DA L+K QI ++
Sbjct: 275 SSSTQASLEIDSLFEGIDFYTSITRARFEELCSDLFRSTLEPVEKALRDAKLDKAQIHDL 334
Query: 187 VLVGGSTRIPKVQQLLKDYFDGKEPNKGVNPDEAVAYGAAVQGGILSG 234
VLVGGSTRIPKVQ+LL+D+F+G++ NK +NPDEAVAYGAAVQ IL G
Sbjct: 335 VLVGGSTRIPKVQKLLQDFFNGRDLNKSINPDEAVAYGAAVQAAILMG 382
>pdb|1HJO|A Chain A, Atpase Domain Of Human Heat Shock 70kda Protein 1
Length = 380
Score = 282 bits (722), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 140/228 (61%), Positives = 170/228 (74%), Gaps = 1/228 (0%)
Query: 8 RQATKDAGIIAGLNVARIINEPTAAAIAYGLDKKG-GEKNILVFDLGGGTFDVSILTIDN 66
RQATKDAG+IAGLNV RIINEPTAAAIAYGLD+ G GE+N+L+FDLGGGTFDVSILTID+
Sbjct: 153 RQATKDAGVIAGLNVLRIINEPTAAAIAYGLDRTGKGERNVLIFDLGGGTFDVSILTIDD 212
Query: 67 GVFEVLSTNGDTHLGGEDFDQRVMEYFXXXXXXXXXXXXXXXXRAIGXXXXXXXXXXXXX 126
G+FEV +T GDTHLGGEDFD R++ +F RA+
Sbjct: 213 GIFEVKATAGDTHLGGEDFDNRLVNHFVEEFKRKHKKDISQNKRAVRRLRTACERAKRTL 272
Query: 127 XXQHQVRVEIESLFDGIDFSEPLTRARFEELNNDLFRKTMGPVKKAMEDAGLEKNQIDEI 186
Q +EI+SLF+GIDF +TRARFEEL +DLFR T+ PV+KA+ DA L+K QI ++
Sbjct: 273 SSSTQASLEIDSLFEGIDFYTSITRARFEELCSDLFRSTLEPVEKALRDAKLDKAQIHDL 332
Query: 187 VLVGGSTRIPKVQQLLKDYFDGKEPNKGVNPDEAVAYGAAVQGGILSG 234
VLVGGSTRIPKVQ+LL+D+F+G++ NK +NPDEAVAYGAAVQ IL G
Sbjct: 333 VLVGGSTRIPKVQKLLQDFFNGRDLNKSINPDEAVAYGAAVQAAILMG 380
>pdb|4FSV|A Chain A, Crystal Structure Of A Heat Shock 70kda Protein 2 (Hspa2)
From Homo Sapiens At 1.80 A Resolution
Length = 387
Score = 282 bits (721), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 143/231 (61%), Positives = 168/231 (72%), Gaps = 3/231 (1%)
Query: 8 RQATKDAGIIAGLNVARIINEPTAAAIAYGLDKKG---GEKNILVFDLGGGTFDVSILTI 64
RQATKDAG I GLNV RIINEPTAAAIAYGLDKKG GEKN+L+FDLGGGTFDVSILTI
Sbjct: 156 RQATKDAGTITGLNVLRIINEPTAAAIAYGLDKKGCAGGEKNVLIFDLGGGTFDVSILTI 215
Query: 65 DNGVFEVLSTNGDTHLGGEDFDQRVMEYFXXXXXXXXXXXXXXXXRAIGXXXXXXXXXXX 124
++G+FEV ST GDTHLGGEDFD R + + RA+
Sbjct: 216 EDGIFEVKSTAGDTHLGGEDFDNRXVSHLAEEFKRKHKKDIGPNKRAVRRLRTACERAKR 275
Query: 125 XXXXQHQVRVEIESLFDGIDFSEPLTRARFEELNNDLFRKTMGPVKKAMEDAGLEKNQID 184
Q +EI+SL++G+DF +TRARFEELN DLFR T+ PV+KA+ DA L+K QI
Sbjct: 276 TLSSSTQASIEIDSLYEGVDFYTSITRARFEELNADLFRGTLEPVEKALRDAKLDKGQIQ 335
Query: 185 EIVLVGGSTRIPKVQQLLKDYFDGKEPNKGVNPDEAVAYGAAVQGGILSGE 235
EIVLVGGSTRIPK+Q+LL+D+F+GKE NK +NPDEAVAYGAAVQ IL G+
Sbjct: 336 EIVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILIGD 386
>pdb|3FE1|A Chain A, Crystal Structure Of The Human 70kda Heat Shock Protein 6
(Hsp70b') Atpase Domain In Complex With Adp And
Inorganic Phosphate
pdb|3FE1|B Chain B, Crystal Structure Of The Human 70kda Heat Shock Protein 6
(Hsp70b') Atpase Domain In Complex With Adp And
Inorganic Phosphate
pdb|3FE1|C Chain C, Crystal Structure Of The Human 70kda Heat Shock Protein 6
(Hsp70b') Atpase Domain In Complex With Adp And
Inorganic Phosphate
Length = 403
Score = 281 bits (720), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 139/229 (60%), Positives = 170/229 (74%), Gaps = 1/229 (0%)
Query: 8 RQATKDAGIIAGLNVARIINEPTAAAIAYGLDKKG-GEKNILVFDLGGGTFDVSILTIDN 66
RQATKDAG IAGLNV RIINEPTAAAIAYGLD++G GE+N+L+FDLGGGTFDVS+L+ID
Sbjct: 175 RQATKDAGAIAGLNVLRIINEPTAAAIAYGLDRRGAGERNVLIFDLGGGTFDVSVLSIDA 234
Query: 67 GVFEVLSTNGDTHLGGEDFDQRVMEYFXXXXXXXXXXXXXXXXRAIGXXXXXXXXXXXXX 126
GVFEV +T GDTHLGGEDFD R++ +F RA+
Sbjct: 235 GVFEVKATAGDTHLGGEDFDNRLVNHFMEEFRRKHGKDLSGNKRALRRLRTACERAKRTL 294
Query: 127 XXQHQVRVEIESLFDGIDFSEPLTRARFEELNNDLFRKTMGPVKKAMEDAGLEKNQIDEI 186
Q +EI+SLF+G+DF +TRARFEEL +DLFR T+ PV+KA+ DA L+K QI ++
Sbjct: 295 SSSTQATLEIDSLFEGVDFYTSITRARFEELCSDLFRSTLEPVEKALRDAKLDKAQIHDV 354
Query: 187 VLVGGSTRIPKVQQLLKDYFDGKEPNKGVNPDEAVAYGAAVQGGILSGE 235
VLVGGSTRIPKVQ+LL+D+F+GKE NK +NPDEAVAYGAAVQ +L G+
Sbjct: 355 VLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAVLMGD 403
>pdb|3GDQ|A Chain A, Crystal Structure Of The Human 70kda Heat Shock Protein
1-Like Atpase Domain In Complex With Adp And Inorganic
Phosphate
Length = 408
Score = 279 bits (713), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 139/229 (60%), Positives = 170/229 (74%), Gaps = 1/229 (0%)
Query: 8 RQATKDAGIIAGLNVARIINEPTAAAIAYGLDKKG-GEKNILVFDLGGGTFDVSILTIDN 66
RQATKDAG+IAGLNV RIINEPTAAAIAYGLDK G GE+++L+FDLGGGTFDVSILTID+
Sbjct: 179 RQATKDAGVIAGLNVLRIINEPTAAAIAYGLDKGGQGERHVLIFDLGGGTFDVSILTIDD 238
Query: 67 GVFEVLSTNGDTHLGGEDFDQRVMEYFXXXXXXXXXXXXXXXXRAIGXXXXXXXXXXXXX 126
G+FEV +T GDTHLGGEDFD R++ +F RA+
Sbjct: 239 GIFEVKATAGDTHLGGEDFDNRLVSHFVEEFKRKHKKDISQNKRAVRRLRTACERAKRTL 298
Query: 127 XXQHQVRVEIESLFDGIDFSEPLTRARFEELNNDLFRKTMGPVKKAMEDAGLEKNQIDEI 186
Q +EI+SL++GIDF +TRARFEEL DLFR T+ PV+KA+ DA ++K +I +I
Sbjct: 299 SSSTQANLEIDSLYEGIDFYTSITRARFEELCADLFRGTLEPVEKALRDAKMDKAKIHDI 358
Query: 187 VLVGGSTRIPKVQQLLKDYFDGKEPNKGVNPDEAVAYGAAVQGGILSGE 235
VLVGGSTRIPKVQ+LL+DYF+G++ NK +NPDEAVAYGAAVQ IL G+
Sbjct: 359 VLVGGSTRIPKVQRLLQDYFNGRDLNKSINPDEAVAYGAAVQAAILMGD 407
>pdb|3KVG|A Chain A, Crystal Structure Of The N-Terminal Domain Of Hsp70
(Cgd2_20) From Cryptosporidium Parvum In Complex With
Amppnp
pdb|3KVG|B Chain B, Crystal Structure Of The N-Terminal Domain Of Hsp70
(Cgd2_20) From Cryptosporidium Parvum In Complex With
Amppnp
pdb|3L4I|A Chain A, Crystal Structure Of The N-Terminal Domain Of Hsp70
(Cgd2_20) From Cryptosporidium Parvum In Complex With
Adp And Inorganic Phosphate
pdb|3L4I|B Chain B, Crystal Structure Of The N-Terminal Domain Of Hsp70
(Cgd2_20) From Cryptosporidium Parvum In Complex With
Adp And Inorganic Phosphate
pdb|3L6Q|A Chain A, Crystal Structure Of The N-Terminal Domain Of Hsp70 From
Cryptosporidium Parvum (Cgd2_20)
pdb|3L6Q|B Chain B, Crystal Structure Of The N-Terminal Domain Of Hsp70 From
Cryptosporidium Parvum (Cgd2_20)
Length = 400
Score = 272 bits (696), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 134/230 (58%), Positives = 170/230 (73%), Gaps = 2/230 (0%)
Query: 8 RQATKDAGIIAGLNVARIINEPTAAAIAYGLDKKG-GEKNILVFDLGGGTFDVSILTIDN 66
RQATKDAG IAGLNV RIINEPTAAAIAYGLDKKG GE+N+L+FDLGGGTFDVS+LTI++
Sbjct: 171 RQATKDAGAIAGLNVMRIINEPTAAAIAYGLDKKGTGERNVLIFDLGGGTFDVSLLTIED 230
Query: 67 GVFEVLSTNGDTHLGGEDFDQRVMEYFXXXXXXXXX-XXXXXXXRAIGXXXXXXXXXXXX 125
G+FEV +T GDTHLGGEDFD R++E+ RA+
Sbjct: 231 GIFEVKATAGDTHLGGEDFDNRLVEFCVQDFKRKNRGMDLTTNARALRRLRTQCERAKRT 290
Query: 126 XXXQHQVRVEIESLFDGIDFSEPLTRARFEELNNDLFRKTMGPVKKAMEDAGLEKNQIDE 185
Q +E++SL++GID+S ++RARFEEL D FR T+ PV+K ++DAG++K + +
Sbjct: 291 LSSSTQATIELDSLYEGIDYSVAISRARFEELCADYFRATLAPVEKVLKDAGMDKRSVHD 350
Query: 186 IVLVGGSTRIPKVQQLLKDYFDGKEPNKGVNPDEAVAYGAAVQGGILSGE 235
+VLVGGSTRIPKVQ L++++F+GKEP K +NPDEAVAYGAAVQ IL+GE
Sbjct: 351 VVLVGGSTRIPKVQALIQEFFNGKEPCKAINPDEAVAYGAAVQAAILNGE 400
>pdb|3GL1|A Chain A, Crystal Structure Of Atpase Domain Of Ssb1 Chaperone, A
Member Of The Hsp70 Family, From Saccharomyces
Cerevisiae
pdb|3GL1|B Chain B, Crystal Structure Of Atpase Domain Of Ssb1 Chaperone, A
Member Of The Hsp70 Family, From Saccharomyces
Cerevisiae
Length = 387
Score = 257 bits (656), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 130/228 (57%), Positives = 161/228 (70%), Gaps = 2/228 (0%)
Query: 8 RQATKDAGIIAGLNVARIINEPTAAAIAYGLD--KKGGEKNILVFDLGGGTFDVSILTID 65
RQATKDAG I+GLNV RIINEPTAAAIAYGL K E+++L+FDLGGGTFDVS+L I
Sbjct: 160 RQATKDAGAISGLNVLRIINEPTAAAIAYGLGAGKSEKERHVLIFDLGGGTFDVSLLHIA 219
Query: 66 NGVFEVLSTNGDTHLGGEDFDQRVMEYFXXXXXXXXXXXXXXXXRAIGXXXXXXXXXXXX 125
GV+ V ST+G+THLGG+DFD ++E+F RA+
Sbjct: 220 GGVYTVKSTSGNTHLGGQDFDTNLLEHFKAEFKKKTGLDISDDARALRRLRTAAERAKRT 279
Query: 126 XXXQHQVRVEIESLFDGIDFSEPLTRARFEELNNDLFRKTMGPVKKAMEDAGLEKNQIDE 185
Q VE++SLFDG DF LTRARFE+LN LF+ T+ PV++ ++DA + K+QIDE
Sbjct: 280 LSSVTQTTVEVDSLFDGEDFESSLTRARFEDLNAALFKSTLEPVEQVLKDAKISKSQIDE 339
Query: 186 IVLVGGSTRIPKVQQLLKDYFDGKEPNKGVNPDEAVAYGAAVQGGILS 233
+VLVGGSTRIPKVQ+LL D+FDGK+ K +NPDEAVAYGAAVQG IL+
Sbjct: 340 VVLVGGSTRIPKVQKLLSDFFDGKQLEKSINPDEAVAYGAAVQGAILT 387
>pdb|1CKR|A Chain A, High Resolution Solution Structure Of The Heat Shock
Cognate-70 Kd Substrate Binding Domain Obtained By
Multidimensional Nmr Techniques
pdb|7HSC|A Chain A, High Resolution Solution Structure Of The Heat Shock
Cognate-70 Kd Substrate Binding Domain Obtained By
Multidimensional Nmr Techniques
Length = 159
Score = 226 bits (576), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 108/155 (69%), Positives = 132/155 (85%)
Query: 241 KDILLLDVAPLTLGIETVGGVMTKLIPRNTVIPTKKSQVFTTYQDQQTTVSIQVFEGERS 300
+D+LLLDV PL+LGIET GGVMT LI RNT IPTK++Q FTTY D Q V IQV+EGER+
Sbjct: 5 QDLLLLDVTPLSLGIETAGGVMTVLIKRNTTIPTKQTQTFTTYSDNQPGVLIQVYEGERA 64
Query: 301 LTKDCRLLGKFDLSGIPPAPRGTPQIEVTFEVDANGILNVKAEDKGTGKSEKITITNDKG 360
+TKD LLGKF+L+GIPPAPRG PQIEVTF++DANGILNV A DK TGK KITITNDKG
Sbjct: 65 MTKDNNLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAVDKSTGKENKITITNDKG 124
Query: 361 RLSQEEIDRMVREAEEFAEEDKKVKEKIDARNSLE 395
RLS+E+I+RMV+EAE++ ED+K ++K+ ++NSLE
Sbjct: 125 RLSKEDIERMVQEAEKYKAEDEKQRDKVSSKNSLE 159
>pdb|3H0X|A Chain A, Crystal Structure Of Peptide-Binding Domain Of Kar2
Protein From Saccharomyces Cerevisiae
Length = 152
Score = 222 bits (566), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 108/149 (72%), Positives = 124/149 (83%)
Query: 247 DVAPLTLGIETVGGVMTKLIPRNTVIPTKKSQVFTTYQDQQTTVSIQVFEGERSLTKDCR 306
DV LTLGIET GGVMT LI RNT IPTKKSQ+F+T D Q TV I+V+EGER+++KD
Sbjct: 4 DVNALTLGIETTGGVMTPLIKRNTAIPTKKSQIFSTAVDNQPTVMIKVYEGERAMSKDNN 63
Query: 307 LLGKFDLSGIPPAPRGTPQIEVTFEVDANGILNVKAEDKGTGKSEKITITNDKGRLSQEE 366
LLGKF+L+GIPPAPRG PQIEVTF +DANGIL V A DKGTGKSE ITITNDKGRL+QEE
Sbjct: 64 LLGKFELTGIPPAPRGVPQIEVTFALDANGILKVSATDKGTGKSESITITNDKGRLTQEE 123
Query: 367 IDRMVREAEEFAEEDKKVKEKIDARNSLE 395
IDRMV EAE+FA ED +K K+++RN LE
Sbjct: 124 IDRMVEEAEKFASEDASIKAKVESRNKLE 152
>pdb|1XQS|C Chain C, Crystal Structure Of The Hspbp1 Core Domain Complexed With
The Fragment Of Hsp70 Atpase Domain
pdb|1XQS|D Chain D, Crystal Structure Of The Hspbp1 Core Domain Complexed With
The Fragment Of Hsp70 Atpase Domain
Length = 191
Score = 216 bits (550), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 106/190 (55%), Positives = 135/190 (71%), Gaps = 1/190 (0%)
Query: 35 AYGLDKKG-GEKNILVFDLGGGTFDVSILTIDNGVFEVLSTNGDTHLGGEDFDQRVMEYF 93
A GLD+ G GE+N+L+FDLGGGTFDVSILTID+G+FEV +T GDTHLGGEDFD R++ +F
Sbjct: 2 AMGLDRTGKGERNVLIFDLGGGTFDVSILTIDDGIFEVKATAGDTHLGGEDFDNRLVNHF 61
Query: 94 XXXXXXXXXXXXXXXXRAIGXXXXXXXXXXXXXXXQHQVRVEIESLFDGIDFSEPLTRAR 153
RA+ Q +EI+SLF+GIDF +TRAR
Sbjct: 62 VEEFKRKHKKDISQNKRAVRRLRTACERAKRTLSSSTQASLEIDSLFEGIDFYTSITRAR 121
Query: 154 FEELNNDLFRKTMGPVKKAMEDAGLEKNQIDEIVLVGGSTRIPKVQQLLKDYFDGKEPNK 213
FEEL +DLFR T+ PV+KA+ DA L+K QI ++VLVGGSTRIPKVQ+LL+D+F+G++ NK
Sbjct: 122 FEELCSDLFRSTLEPVEKALRDAKLDKAQIHDLVLVGGSTRIPKVQKLLQDFFNGRDLNK 181
Query: 214 GVNPDEAVAY 223
+NPDEAVAY
Sbjct: 182 SINPDEAVAY 191
>pdb|3DOB|A Chain A, Peptide-Binding Domain Of Heat Shock 70 Kda Protein
F44e5.5 From C.Elegans.
pdb|3DOB|B Chain B, Peptide-Binding Domain Of Heat Shock 70 Kda Protein
F44e5.5 From C.Elegans
Length = 152
Score = 214 bits (544), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 102/149 (68%), Positives = 121/149 (81%)
Query: 247 DVAPLTLGIETVGGVMTKLIPRNTVIPTKKSQVFTTYQDQQTTVSIQVFEGERSLTKDCR 306
DVAPL+LGIET GGVMT LI RNT IPTK + FTTY D Q VSIQV+EGER++T+D
Sbjct: 4 DVAPLSLGIETAGGVMTNLIDRNTRIPTKACKTFTTYADNQPGVSIQVYEGERAMTRDNH 63
Query: 307 LLGKFDLSGIPPAPRGTPQIEVTFEVDANGILNVKAEDKGTGKSEKITITNDKGRLSQEE 366
LG F+LSGIPPAPRG PQIEVTF +DANGILNV AEDK TGKS +ITI N+KGRL+Q +
Sbjct: 64 RLGTFELSGIPPAPRGVPQIEVTFNIDANGILNVSAEDKSTGKSNRITIQNEKGRLTQSD 123
Query: 367 IDRMVREAEEFAEEDKKVKEKIDARNSLE 395
IDRMV EA++F +ED + +E++ ARN LE
Sbjct: 124 IDRMVHEAKQFEKEDGEQRERVQARNQLE 152
>pdb|2OP6|A Chain A, Peptide-Binding Domain Of Heat Shock 70 Kda Protein D
Precursor From C.Elegans
Length = 152
Score = 210 bits (534), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 100/149 (67%), Positives = 121/149 (81%)
Query: 247 DVAPLTLGIETVGGVMTKLIPRNTVIPTKKSQVFTTYQDQQTTVSIQVFEGERSLTKDCR 306
DV PLTLGIETVGGVMTKLI RNTVIPTKKSQVF+T D Q+ VSI ++EGER + D
Sbjct: 4 DVNPLTLGIETVGGVMTKLIGRNTVIPTKKSQVFSTAADSQSAVSIVIYEGERPMVMDNH 63
Query: 307 LLGKFDLSGIPPAPRGTPQIEVTFEVDANGILNVKAEDKGTGKSEKITITNDKGRLSQEE 366
LG FD++GIPPAPRG PQIEVTFE+D NGIL+V AEDKGTG K+TITND RLS E+
Sbjct: 64 KLGNFDVTGIPPAPRGVPQIEVTFEIDVNGILHVSAEDKGTGNKNKLTITNDHNRLSPED 123
Query: 367 IDRMVREAEEFAEEDKKVKEKIDARNSLE 395
I+RM+ +A++FA +D+ KEK+++RN LE
Sbjct: 124 IERMINDADKFAADDQAQKEKVESRNELE 152
>pdb|1DKG|D Chain D, Crystal Structure Of The Nucleotide Exchange Factor Grpe
Bound To The Atpase Domain Of The Molecular Chaperone
Dnak
Length = 383
Score = 199 bits (507), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 114/236 (48%), Positives = 145/236 (61%), Gaps = 13/236 (5%)
Query: 8 RQATKDAGIIAGLNVARIINEPTAAAIAYGLDKKGGEKNILVFDLGGGTFDVSILTID-- 65
RQATKDAG IAGL V RIINEPTAAA+AYGLDK G + I V+DLGGGTFD+SI+ ID
Sbjct: 151 RQATKDAGRIAGLEVKRIINEPTAAALAYGLDKGTGNRTIAVYDLGGGTFDISIIEIDEV 210
Query: 66 --NGVFEVLSTNGDTHLGGEDFDQRVMEYFXXXXXXXXXXXXXXXXRAIGXXXXXXXXXX 123
FEVL+TNGDTHLGGEDFD R++ Y A+
Sbjct: 211 DGEKTFEVLATNGDTHLGGEDFDSRLINYLVEEFKKDQGIDLRNDPLAMQRLKEAAEKAK 270
Query: 124 XXXXXQHQVRVEIESLFDGIDFSEP------LTRARFEELNNDLFRKTMGPVKKAMEDAG 177
Q V + + D + P +TRA+ E L DL +++ +K A++DAG
Sbjct: 271 IELSSAQQTDVNLPYIT--ADATGPKHMNIKVTRAKLESLVEDLVNRSIELLKVALQDAG 328
Query: 178 LEKNQIDEIVLVGGSTRIPKVQQLLKDYFDGKEPNKGVNPDEAVAYGAAVQGGILS 233
L + ID+++LVGG TR+P VQ+ + ++F GKEP K VNPDEAVA GAAVQGG+L+
Sbjct: 329 LSVSDIDDVILVGGQTRMPMVQKKVAEFF-GKEPRKDVNPDEAVAIGAAVQGGVLT 383
>pdb|1DKY|A Chain A, The Substrate Binding Domain Of Dnak In Complex With A
Substrate Peptide, Determined From Type 2 Native
Crystals
pdb|1DKY|B Chain B, The Substrate Binding Domain Of Dnak In Complex With A
Substrate Peptide, Determined From Type 2 Native
Crystals
pdb|1DKZ|A Chain A, The Substrate Binding Domain Of Dnak In Complex With A
Substrate Peptide, Determined From Type 1 Native
Crystals
Length = 219
Score = 198 bits (503), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 108/229 (47%), Positives = 153/229 (66%), Gaps = 13/229 (5%)
Query: 243 ILLLDVAPLTLGIETVGGVMTKLIPRNTVIPTKKSQVFTTYQDQQTTVSIQVFEGERSLT 302
+LLLDV PL+LGIET+GGVMT LI +NT IPTK SQVF+T +D Q+ VSI V +GER
Sbjct: 1 VLLLDVTPLSLGIETMGGVMTTLIAKNTTIPTKHSQVFSTAEDNQSAVSIHVLQGERKRA 60
Query: 303 KDCRLLGKFDLSGIPPAPRGTPQIEVTFEVDANGILNVKAEDKGTGKSEKITITNDKGRL 362
D + LG+F+L GI PAPRG PQIEVTF++DA+GIL+V A+DK +GK +KITI G L
Sbjct: 61 ADNKSLGQFNLDGINPAPRGMPQIEVTFDIDADGILHVSAKDKNSGKEQKITIKASSG-L 119
Query: 363 SQEEIDRMVREAEEFAEEDKKVKEKIDARNSLETYVYNMKNQINDKDKLADKLESDEKDK 422
+++EI +MVR+AE AE D+K +E + RN + +++ + Q+ ++ DKL +D+K
Sbjct: 120 NEDEIQKMVRDAEANAEADRKFEELVQTRNQGDHLLHSTRKQV---EEAGDKLPADDKTA 176
Query: 423 IE---TAVKEALEWLDDNQSAEKEDYEEKLKEVEAVCNPIITAVYQRSG 468
IE TA++ AL+ D K E K++E+ V ++ Q+
Sbjct: 177 IESALTALETALKGED------KAAIEAKMQELAQVSQKLMEIAQQQHA 219
>pdb|3DPO|A Chain A, Crystal Structure Of The Substrate Binding Domain Of E.
Coli Dnak In Complex With A Short Pyrrhocoricin-Derived
Inhibitor Peptide
pdb|3DPO|B Chain B, Crystal Structure Of The Substrate Binding Domain Of E.
Coli Dnak In Complex With A Short Pyrrhocoricin-Derived
Inhibitor Peptide
pdb|3DPP|A Chain A, Crystal Structure Of The Substrate Binding Domain Of E.
Coli Dnak In Complex With A Long Pyrrhocoricin-Derived
Inhibitor Peptide (Form A)
pdb|3DPP|B Chain B, Crystal Structure Of The Substrate Binding Domain Of E.
Coli Dnak In Complex With A Long Pyrrhocoricin-Derived
Inhibitor Peptide (Form A)
pdb|3DPQ|A Chain A, Crystal Structure Of The Substrate Binding Domain Of E.
Coli Dnak In Complex With A Long Pyrrhocoricin-Derived
Inhibitor Peptide (Form B)
pdb|3DPQ|B Chain B, Crystal Structure Of The Substrate Binding Domain Of E.
Coli Dnak In Complex With A Long Pyrrhocoricin-Derived
Inhibitor Peptide (Form B)
pdb|3DPQ|E Chain E, Crystal Structure Of The Substrate Binding Domain Of E.
Coli Dnak In Complex With A Long Pyrrhocoricin-Derived
Inhibitor Peptide (Form B)
pdb|3DPQ|F Chain F, Crystal Structure Of The Substrate Binding Domain Of E.
Coli Dnak In Complex With A Long Pyrrhocoricin-Derived
Inhibitor Peptide (Form B)
pdb|3QNJ|A Chain A, Crystal Structure Of The Substrate Binding Domain Of
E.Coli Dnak In Complex With The Antimicrobial Peptide
Oncocin
pdb|3QNJ|B Chain B, Crystal Structure Of The Substrate Binding Domain Of
E.Coli Dnak In Complex With The Antimicrobial Peptide
Oncocin
pdb|4E81|A Chain A, Crystal Structure Of The Substrate Binding Domain Of
E.Coli Dnak In Complex With A Short Apidaecin Peptide
pdb|4E81|B Chain B, Crystal Structure Of The Substrate Binding Domain Of
E.Coli Dnak In Complex With A Short Apidaecin Peptide
Length = 219
Score = 197 bits (500), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 107/229 (46%), Positives = 153/229 (66%), Gaps = 13/229 (5%)
Query: 243 ILLLDVAPLTLGIETVGGVMTKLIPRNTVIPTKKSQVFTTYQDQQTTVSIQVFEGERSLT 302
+LLLDV PL+LGIET+GGVMT LI +NT IPTK SQVF+T +D Q+ V+I V +GER
Sbjct: 1 VLLLDVTPLSLGIETMGGVMTTLIAKNTTIPTKHSQVFSTAEDNQSAVTIHVLQGERKRA 60
Query: 303 KDCRLLGKFDLSGIPPAPRGTPQIEVTFEVDANGILNVKAEDKGTGKSEKITITNDKGRL 362
D + LG+F+L GI PAPRG PQIEVTF++DA+GIL+V A+DK +GK +KITI G L
Sbjct: 61 ADNKSLGQFNLDGINPAPRGMPQIEVTFDIDADGILHVSAKDKNSGKEQKITIKASSG-L 119
Query: 363 SQEEIDRMVREAEEFAEEDKKVKEKIDARNSLETYVYNMKNQINDKDKLADKLESDEKDK 422
+++EI +MVR+AE AE D+K +E + RN + +++ + Q+ ++ DKL +D+K
Sbjct: 120 NEDEIQKMVRDAEANAEADRKFEELVQTRNQGDHLLHSTRKQV---EEAGDKLPADDKTA 176
Query: 423 IE---TAVKEALEWLDDNQSAEKEDYEEKLKEVEAVCNPIITAVYQRSG 468
IE TA++ AL+ D K E K++E+ V ++ Q+
Sbjct: 177 IESALTALETALKGED------KAAIEAKMQELAQVSQKLMEIAQQQHA 219
>pdb|1DKX|A Chain A, The Substrate Binding Domain Of Dnak In Complex With A
Substrate Peptide, Determined From Type 1
Selenomethionyl Crystals
Length = 219
Score = 196 bits (498), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 107/229 (46%), Positives = 152/229 (66%), Gaps = 13/229 (5%)
Query: 243 ILLLDVAPLTLGIETVGGVMTKLIPRNTVIPTKKSQVFTTYQDQQTTVSIQVFEGERSLT 302
+LLLDV PL+LGIET+GGVMT LI +NT IPTK SQVF+T +D Q+ V+I V +GER
Sbjct: 1 VLLLDVTPLSLGIETMGGVMTTLIAKNTTIPTKHSQVFSTAEDNQSAVTIHVLQGERKRA 60
Query: 303 KDCRLLGKFDLSGIPPAPRGTPQIEVTFEVDANGILNVKAEDKGTGKSEKITITNDKGRL 362
D + LG+F+L GI PAPRG PQIEVTF++DA+GIL+V A+DK +GK +KITI G L
Sbjct: 61 ADNKSLGQFNLDGINPAPRGMPQIEVTFDIDADGILHVSAKDKNSGKEQKITIKASSG-L 119
Query: 363 SQEEIDRMVREAEEFAEEDKKVKEKIDARNSLETYVYNMKNQINDKDKLADKLESDEKDK 422
+++EI +MVR+AE AE D+K E + RN + +++ + Q+ ++ DKL +D+K
Sbjct: 120 NEDEIQKMVRDAEANAEADRKFDELVQTRNQGDHLLHSTRKQV---EEAGDKLPADDKTA 176
Query: 423 IE---TAVKEALEWLDDNQSAEKEDYEEKLKEVEAVCNPIITAVYQRSG 468
IE TA++ AL+ D K E K++E+ V ++ Q+
Sbjct: 177 IESALTALETALKGED------KAAIEAKMQELAQVSQKLMEIAQQQHA 219
>pdb|1BPR|A Chain A, Nmr Structure Of The Substrate Binding Domain Of Dnak,
Minimized Average Structure
pdb|2BPR|A Chain A, Nmr Structure Of The Substrate Binding Domain Of Dnak, 25
Structures
Length = 191
Score = 191 bits (484), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 95/179 (53%), Positives = 132/179 (73%), Gaps = 4/179 (2%)
Query: 241 KDILLLDVAPLTLGIETVGGVMTKLIPRNTVIPTKKSQVFTTYQDQQTTVSIQVFEGERS 300
KD+LLLDV PL+LGIET+GGVMT LI +NT IPTK SQVF+T +D Q+ V+I V +GER
Sbjct: 17 KDVLLLDVTPLSLGIETMGGVMTTLIAKNTTIPTKHSQVFSTAEDNQSAVTIHVLQGERK 76
Query: 301 LTKDCRLLGKFDLSGIPPAPRGTPQIEVTFEVDANGILNVKAEDKGTGKSEKITITNDKG 360
D + LG+F+L GI PAPRG PQIEVTF++DA+GIL+V A+DK +GK +KITI G
Sbjct: 77 RAADNKSLGQFNLDGINPAPRGMPQIEVTFDIDADGILHVSAKDKNSGKEQKITIKASSG 136
Query: 361 RLSQEEIDRMVREAEEFAEEDKKVKEKIDARNSLETYVYNMKNQINDKDKLADKLESDE 419
L+++EI +MVR+AE AE D+K +E + RN + +++ + Q+ ++ DKL +D+
Sbjct: 137 -LNEDEIQKMVRDAEANAEADRKFEELVQTRNQGDHLLHSTRKQV---EEAGDKLPADD 191
>pdb|3N8E|A Chain A, Substrate Binding Domain Of The Human Heat Shock 70kda
Prote (Mortalin)
pdb|3N8E|B Chain B, Substrate Binding Domain Of The Human Heat Shock 70kda
Prote (Mortalin)
Length = 182
Score = 187 bits (474), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 90/160 (56%), Positives = 126/160 (78%), Gaps = 1/160 (0%)
Query: 246 LDVAPLTLGIETVGGVMTKLIPRNTVIPTKKSQVFTTYQDQQTTVSIQVFEGERSLTKDC 305
+DV PL+LGIET+GGV TKLI RNT IPTKKSQVF+T D QT V I+V +GER + D
Sbjct: 23 MDVTPLSLGIETLGGVFTKLINRNTTIPTKKSQVFSTAADGQTQVEIKVCQGEREMAGDN 82
Query: 306 RLLGKFDLSGIPPAPRGTPQIEVTFEVDANGILNVKAEDKGTGKSEKITITNDKGRLSQE 365
+LLG+F L GIPPAPRG PQIEVTF++DANGI++V A+DKGTG+ ++I I + G LS++
Sbjct: 83 KLLGQFTLIGIPPAPRGVPQIEVTFDIDANGIVHVSAKDKGTGREQQIVIQSSGG-LSKD 141
Query: 366 EIDRMVREAEEFAEEDKKVKEKIDARNSLETYVYNMKNQI 405
+I+ MV+ AE++AEED++ KE+++A N E +++ + ++
Sbjct: 142 DIENMVKNAEKYAEEDRRKKERVEAVNMAEGIIHDTETKM 181
>pdb|3DQG|A Chain A, Peptide-Binding Domain Of Heat Shock 70 Kda Protein F,
Mitochondrial Precursor, From Caenorhabditis Elegans.
pdb|3DQG|B Chain B, Peptide-Binding Domain Of Heat Shock 70 Kda Protein F,
Mitochondrial Precursor, From Caenorhabditis Elegans.
pdb|3DQG|C Chain C, Peptide-Binding Domain Of Heat Shock 70 Kda Protein F,
Mitochondrial Precursor, From Caenorhabditis Elegans.
pdb|3DQG|D Chain D, Peptide-Binding Domain Of Heat Shock 70 Kda Protein F,
Mitochondrial Precursor, From Caenorhabditis Elegans
Length = 151
Score = 183 bits (464), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 89/149 (59%), Positives = 115/149 (77%), Gaps = 1/149 (0%)
Query: 247 DVAPLTLGIETVGGVMTKLIPRNTVIPTKKSQVFTTYQDQQTTVSIQVFEGERSLTKDCR 306
DV PL+LGIET+GG+MTKLI RNT IPTKKSQVF+T D QT V I+VF+GER + +
Sbjct: 4 DVTPLSLGIETLGGIMTKLITRNTTIPTKKSQVFSTAADGQTQVQIKVFQGEREMATSNK 63
Query: 307 LLGKFDLSGIPPAPRGTPQIEVTFEVDANGILNVKAEDKGTGKSEKITITNDKGRLSQEE 366
LLG+F L GIPPAPRG PQ+EVTF++DANGI+NV A D+GTGK ++I I + G LS+++
Sbjct: 64 LLGQFSLVGIPPAPRGVPQVEVTFDIDANGIVNVSARDRGTGKEQQIVIQSSGG-LSKDQ 122
Query: 367 IDRMVREAEEFAEEDKKVKEKIDARNSLE 395
I+ M++EAE+ A ED K KE ++ N E
Sbjct: 123 IENMIKEAEKNAAEDAKRKELVEVINQAE 151
>pdb|1Q5L|A Chain A, Nmr Structure Of The Substrate Binding Domain Of Dnak
Bound To The Peptide Nrllltg
Length = 135
Score = 149 bits (376), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 70/116 (60%), Positives = 90/116 (77%)
Query: 245 LLDVAPLTLGIETVGGVMTKLIPRNTVIPTKKSQVFTTYQDQQTTVSIQVFEGERSLTKD 304
++DV PL+LGIET+GGVMT LI +NT IPTK SQVF+T +D Q+ V+I V +GER D
Sbjct: 19 MVDVTPLSLGIETMGGVMTTLIAKNTTIPTKHSQVFSTAEDNQSAVTIHVLQGERKRAAD 78
Query: 305 CRLLGKFDLSGIPPAPRGTPQIEVTFEVDANGILNVKAEDKGTGKSEKITITNDKG 360
+ LG+F+L GI PAPRG PQIEVTF++DA+GIL+V A+DK +GK +KITI G
Sbjct: 79 NKSLGQFNLDGINPAPRGMPQIEVTFDIDADGILHVSAKDKNSGKEQKITIKASSG 134
>pdb|1DG4|A Chain A, Nmr Structure Of The Substrate Binding Domain Of Dnak In
The Apo Form
Length = 115
Score = 148 bits (373), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 70/114 (61%), Positives = 88/114 (77%)
Query: 247 DVAPLTLGIETVGGVMTKLIPRNTVIPTKKSQVFTTYQDQQTTVSIQVFEGERSLTKDCR 306
DV PL+LGIET+GGVMT LI +NT IPTK SQVF+T +D Q+ V+I V +GER D +
Sbjct: 1 DVTPLSLGIETMGGVMTTLIAKNTTIPTKHSQVFSTAEDNQSAVTIHVLQGERKRAADNK 60
Query: 307 LLGKFDLSGIPPAPRGTPQIEVTFEVDANGILNVKAEDKGTGKSEKITITNDKG 360
LG+F+L GI PAPRG PQIEVTF++DA+GIL+V A+DK +GK +KITI G
Sbjct: 61 SLGQFNLDGINPAPRGMPQIEVTFDIDADGILHVSAKDKNSGKEQKITIKASSG 114
>pdb|1U00|A Chain A, Hsca Substrate Binding Domain Complexed With The Iscu
Recognition Peptide Elppvkihc
Length = 227
Score = 146 bits (369), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 80/199 (40%), Positives = 121/199 (60%), Gaps = 17/199 (8%)
Query: 246 LDVAPLTLGIETVGGVMTKLIPRNTVIPTKKSQVFTTYQDQQTTVSIQVFEGERSLTKDC 305
+DV PL+LG+ET+GG++ K+IPRNT IP ++Q FTT++D QT +SI V +GER L +DC
Sbjct: 1 MDVIPLSLGLETMGGLVEKVIPRNTTIPVARAQDFTTFKDGQTAMSIHVMQGERELVQDC 60
Query: 306 RLLGKFDLSGIPPAPRGTPQIEVTFEVDANGILNVKAEDKGTGKSEKITITNDKGRLSQE 365
R L +F L GIP P G I VTF+VDA+G+L+V A +K TG I + G L+
Sbjct: 61 RSLARFALRGIPALPAGGAHIRVTFQVDADGLLSVTAMEKSTGVEASIQVKPSYG-LTDS 119
Query: 366 EIDRMVREAEEFAEEDKKVK----EKIDARNSLETY----------VYNMKNQIND--KD 409
EI M++++ +AE+D K + +K++A LE+ + + Q+ D
Sbjct: 120 EIASMIKDSMSYAEQDVKARMLAEQKVEAARVLESLHGALAADAALLSAAERQVIDDAAA 179
Query: 410 KLADKLESDEKDKIETAVK 428
L++ + D+ D IE A+K
Sbjct: 180 HLSEVAQGDDVDAIEQAIK 198
>pdb|3D2F|A Chain A, Crystal Structure Of A Complex Of Sse1p And Hsp70
pdb|3D2F|C Chain C, Crystal Structure Of A Complex Of Sse1p And Hsp70
Length = 675
Score = 144 bits (362), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 124/481 (25%), Positives = 213/481 (44%), Gaps = 43/481 (8%)
Query: 8 RQATKDAGIIAGLNVARIINEPTAAAIAYGLDK----KGGEK-NILVF-DLGGGTFDVSI 61
R DA IAGLN RI+N+ TAA ++YG+ K +G EK I+ F D+G ++ SI
Sbjct: 154 RYNIADAARIAGLNPVRIVNDVTAAGVSYGIFKTDLPEGEEKPRIVAFVDIGHSSYTCSI 213
Query: 62 LTIDNGVFEVLSTNGDTHLGGEDFDQRVMEYFXXXXXXXXXXXXXXXXRAIGXXXXXXXX 121
+ G +VL T D H GG DFD + E+F +A
Sbjct: 214 MAFKKGQLKVLGTACDKHFGGRDFDLAITEHFADEFKTKYKIDIRENPKAYNRILTAAEK 273
Query: 122 XXXXXXXQHQVRVEIESLFDGIDFSEPLTRARFEELNNDLFRKTMGPVKKAMEDAGLEKN 181
+ES+ + +D S L+R EEL L + PV KA+ A L
Sbjct: 274 LKKVLSANTNAPFSVESVMNDVDVSSQLSREELEELVKPLLERVTEPVTKALAQAKLSAE 333
Query: 182 QIDEIVLVGGSTRIPKVQQLLKDYFDGKEPNKGVNPDEAVAYGAAVQGGILSGEGGDETK 241
++D + ++GG+TRIP ++Q + + F GK + +N DEA+A GAA I S +
Sbjct: 334 EVDFVEIIGGTTRIPTLKQSISEAF-GKPLSTTLNQDEAIAKGAAFICAIHSPTL--RVR 390
Query: 242 DILLLDVAPLTLGIETVGGV----MTKLIPRNTVIPTKKSQVFTTYQDQQTTVSIQVFEG 297
D+ P ++ V ++ P + P+ K D F
Sbjct: 391 PFKFEDIHPYSVSYSWDKQVEDEDHMEVFPAGSSFPSTKLITLNRTGD---------FSM 441
Query: 298 ERSLTKDCRL-------LGKFDLSGIP-PAPRGTPQIEVTFEVDANGILNVK-------- 341
S T +L + ++++G+ P + + +++ D +G+ ++
Sbjct: 442 AASYTDITQLPPNTPEQIANWEITGVQLPEGQDSVPVKLKLRCDPSGLHTIEEAYTIEDI 501
Query: 342 --AEDKGTGKSEKITITNDKGRLSQEEIDRMVREAEEFAEEDKKVKEKIDARNSLETYVY 399
D T K + +TI L ++++ ++ + E +DK V E D +N+LE Y+Y
Sbjct: 502 EAGSDTKTVKKDDLTIVAHTFGLDAKKLNELIEKENEMLAQDKLVAETEDRKNTLEEYIY 561
Query: 400 NMKNQINDKDKLADKLESDEKDKIETAVKEALEWL-DDNQSAEKEDYEEKLKEVEAVCNP 458
++ ++ +++ A EK K++ + +A EWL D+ + K Y K +E+ ++ N
Sbjct: 562 TLRGKL--EEEYAPFASDAEKTKLQGMLNKAEEWLYDEGFDSIKAKYIAKYEELASLGNI 619
Query: 459 I 459
I
Sbjct: 620 I 620
>pdb|3D2E|A Chain A, Crystal Structure Of A Complex Of Sse1p And Hsp70,
Selenomethionine- Labeled Crystals
pdb|3D2E|C Chain C, Crystal Structure Of A Complex Of Sse1p And Hsp70,
Selenomethionine- Labeled Crystals
Length = 675
Score = 141 bits (355), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 124/481 (25%), Positives = 212/481 (44%), Gaps = 43/481 (8%)
Query: 8 RQATKDAGIIAGLNVARIINEPTAAAIAYGLDK----KGGEK-NILVF-DLGGGTFDVSI 61
R DA IAGLN RI+N+ TAA ++YG+ K +G EK I+ F D+G ++ SI
Sbjct: 154 RYNIADAARIAGLNPVRIVNDVTAAGVSYGIFKTDLPEGEEKPRIVAFVDIGHSSYTCSI 213
Query: 62 LTIDNGVFEVLSTNGDTHLGGEDFDQRVMEYFXXXXXXXXXXXXXXXXRAIGXXXXXXXX 121
G +VL T D H GG DFD + E+F +A
Sbjct: 214 XAFKKGQLKVLGTACDKHFGGRDFDLAITEHFADEFKTKYKIDIRENPKAYNRILTAAEK 273
Query: 122 XXXXXXXQHQVRVEIESLFDGIDFSEPLTRARFEELNNDLFRKTMGPVKKAMEDAGLEKN 181
+ES+ + +D S L+R EEL L + PV KA+ A L
Sbjct: 274 LKKVLSANTNAPFSVESVXNDVDVSSQLSREELEELVKPLLERVTEPVTKALAQAKLSAE 333
Query: 182 QIDEIVLVGGSTRIPKVQQLLKDYFDGKEPNKGVNPDEAVAYGAAVQGGILSGEGGDETK 241
++D + ++GG+TRIP ++Q + + F GK + +N DEA+A GAA I S +
Sbjct: 334 EVDFVEIIGGTTRIPTLKQSISEAF-GKPLSTTLNQDEAIAKGAAFICAIHSPTL--RVR 390
Query: 242 DILLLDVAPLTLGIETVGGV----MTKLIPRNTVIPTKKSQVFTTYQDQQTTVSIQVFEG 297
D+ P ++ V ++ P + P+ K D F
Sbjct: 391 PFKFEDIHPYSVSYSWDKQVEDEDHXEVFPAGSSFPSTKLITLNRTGD---------FSX 441
Query: 298 ERSLTKDCRL-------LGKFDLSGIP-PAPRGTPQIEVTFEVDANGILNVK-------- 341
S T +L + ++++G+ P + + +++ D +G+ ++
Sbjct: 442 AASYTDITQLPPNTPEQIANWEITGVQLPEGQDSVPVKLKLRCDPSGLHTIEEAYTIEDI 501
Query: 342 --AEDKGTGKSEKITITNDKGRLSQEEIDRMVREAEEFAEEDKKVKEKIDARNSLETYVY 399
D T K + +TI L ++++ ++ + E +DK V E D +N+LE Y+Y
Sbjct: 502 EAGSDTKTVKKDDLTIVAHTFGLDAKKLNELIEKENEXLAQDKLVAETEDRKNTLEEYIY 561
Query: 400 NMKNQINDKDKLADKLESDEKDKIETAVKEALEWL-DDNQSAEKEDYEEKLKEVEAVCNP 458
++ ++ +++ A EK K++ + +A EWL D+ + K Y K +E+ ++ N
Sbjct: 562 TLRGKL--EEEYAPFASDAEKTKLQGXLNKAEEWLYDEGFDSIKAKYIAKYEELASLGNI 619
Query: 459 I 459
I
Sbjct: 620 I 620
>pdb|3C7N|A Chain A, Structure Of The Hsp110:hsc70 Nucleotide Exchange Complex
Length = 668
Score = 123 bits (308), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 126/501 (25%), Positives = 213/501 (42%), Gaps = 65/501 (12%)
Query: 8 RQATKDAGIIAGLNVARIINEPTAAAIAYGLDK----KGGEK-NILVF-DLGGGTFDVSI 61
R DA IAGLN RI+N+ TAA ++YG+ K +G EK I+ F D+G ++ SI
Sbjct: 156 RYNIADAARIAGLNPVRIVNDVTAAGVSYGIFKTDLPEGEEKPRIVAFVDIGHSSYTCSI 215
Query: 62 LTIDNGVFEVLSTNGDTHLGGEDFDQRVMEYFXXXXXXXXXXXXXXXXRAIGXXXXXXXX 121
+ G +VL T D H GG DFD + E+F +A
Sbjct: 216 MAFKKGQLKVLGTACDKHFGGRDFDLAITEHFADEFKTKYKIDIRENPKAYNRILTAAEK 275
Query: 122 XXXXXXXQHQVRVEIESLFDGIDFSEPLTRARFEELNNDLFRKTMGPVKKAMEDAGLEKN 181
+ES+ + +D S L+R EEL L + PV KA+ A L
Sbjct: 276 LKKVLSANTNAPFSVESVMNDVDVSSQLSREELEELVKPLLERVTEPVTKALAQAKLSAE 335
Query: 182 QIDEIVLVGGSTRIPKVQQLLKDYFDGKEPNKGVNPDEAVAYGAAVQGGILSGEGGDETK 241
++D + ++GG+TRIP ++Q + + F GK + +N DEA+A GAA I S +
Sbjct: 336 EVDFVEIIGGTTRIPTLKQSISEAF-GKPLSTTLNQDEAIAKGAAFICAIHSPTL--RVR 392
Query: 242 DILLLDVAPLTLGIETVGGV----MTKLIPRNTVIPTKKSQVFTTYQDQQTTVSIQVFEG 297
D+ P ++ V ++ P + P+ K D F
Sbjct: 393 PFKFEDIHPYSVSYSWDKQVEDEDHMEVFPAGSSFPSTKLITLNRTGD---------FSM 443
Query: 298 ERSLTKDCRL-------LGKFDLSGIP-PAPRGTPQIEVTFEVDANGILNVKAEDKGTGK 349
S T +L + ++++G+ P + + +++ D +G+ + E+ T +
Sbjct: 444 AASYTDITQLPPNTPEQIANWEITGVQLPEGQDSVPVKLKLRCDPSGLHTI--EEAYTIE 501
Query: 350 ----SEKITITNDKGRLSQEEI---------DRMVREAEEFAEEDKKVKEKI-------- 388
E I + D +++E D + A F + KK+ E I
Sbjct: 502 DIEVEEPIPLPEDAPEDAEQEFKKVTKTVKKDDLTIVAHTFGLDAKKLNELIEKENEMLA 561
Query: 389 ---------DARNSLETYVYNMKNQINDKDKLADKLESDEKDKIETAVKEALEWL-DDNQ 438
D +N+LE Y+Y ++ ++ +++ A EK K++ + +A EWL D+
Sbjct: 562 QDKLVAETEDRKNTLEEYIYTLRGKL--EEEYAPFASDAEKTKLQGMLNKAEEWLYDEGF 619
Query: 439 SAEKEDYEEKLKEVEAVCNPI 459
+ K Y K +E+ ++ N I
Sbjct: 620 DSIKAKYIAKYEELASLGNII 640
>pdb|2QXL|A Chain A, Crystal Structure Analysis Of Sse1, A Yeast Hsp110
pdb|2QXL|B Chain B, Crystal Structure Analysis Of Sse1, A Yeast Hsp110
Length = 658
Score = 123 bits (308), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 126/501 (25%), Positives = 213/501 (42%), Gaps = 65/501 (12%)
Query: 8 RQATKDAGIIAGLNVARIINEPTAAAIAYGLDK----KGGEK-NILVF-DLGGGTFDVSI 61
R DA IAGLN RI+N+ TAA ++YG+ K +G EK I+ F D+G ++ SI
Sbjct: 153 RYNIADAARIAGLNPVRIVNDVTAAGVSYGIFKTDLPEGEEKPRIVAFVDIGHSSYTCSI 212
Query: 62 LTIDNGVFEVLSTNGDTHLGGEDFDQRVMEYFXXXXXXXXXXXXXXXXRAIGXXXXXXXX 121
+ G +VL T D H GG DFD + E+F +A
Sbjct: 213 MAFKKGQLKVLGTACDKHFGGRDFDLAITEHFADEFKTKYKIDIRENPKAYNRILTAAEK 272
Query: 122 XXXXXXXQHQVRVEIESLFDGIDFSEPLTRARFEELNNDLFRKTMGPVKKAMEDAGLEKN 181
+ES+ + +D S L+R EEL L + PV KA+ A L
Sbjct: 273 LKKVLSANTNAPFSVESVMNDVDVSSQLSREELEELVKPLLERVTEPVTKALAQAKLSAE 332
Query: 182 QIDEIVLVGGSTRIPKVQQLLKDYFDGKEPNKGVNPDEAVAYGAAVQGGILSGEGGDETK 241
++D + ++GG+TRIP ++Q + + F GK + +N DEA+A GAA I S +
Sbjct: 333 EVDFVEIIGGTTRIPTLKQSISEAF-GKPLSTTLNQDEAIAKGAAFICAIHSPTL--RVR 389
Query: 242 DILLLDVAPLTLGIETVGGV----MTKLIPRNTVIPTKKSQVFTTYQDQQTTVSIQVFEG 297
D+ P ++ V ++ P + P+ K D F
Sbjct: 390 PFKFEDIHPYSVSYSWDKQVEDEDHMEVFPAGSSFPSTKLITLNRTGD---------FSM 440
Query: 298 ERSLTKDCRL-------LGKFDLSGIP-PAPRGTPQIEVTFEVDANGILNVKAEDKGTGK 349
S T +L + ++++G+ P + + +++ D +G+ + E+ T +
Sbjct: 441 AASYTDITQLPPNTPEQIANWEITGVQLPEGQDSVPVKLKLRCDPSGLHTI--EEAYTIE 498
Query: 350 ----SEKITITNDKGRLSQEEI---------DRMVREAEEFAEEDKKVKEKI-------- 388
E I + D +++E D + A F + KK+ E I
Sbjct: 499 DIEVEEPIPLPEDAPEDAEQEFKKVTKTVKKDDLTIVAHTFGLDAKKLNELIEKENEMLA 558
Query: 389 ---------DARNSLETYVYNMKNQINDKDKLADKLESDEKDKIETAVKEALEWL-DDNQ 438
D +N+LE Y+Y ++ ++ +++ A EK K++ + +A EWL D+
Sbjct: 559 QDKLVAETEDRKNTLEEYIYTLRGKL--EEEYAPFASDAEKTKLQGMLNKAEEWLYDEGF 616
Query: 439 SAEKEDYEEKLKEVEAVCNPI 459
+ K Y K +E+ ++ N I
Sbjct: 617 DSIKAKYIAKYEELASLGNII 637
>pdb|4GNI|A Chain A, Structure Of The Ssz1 Atpase Bound To Atp And Magnesium
pdb|4GNI|B Chain B, Structure Of The Ssz1 Atpase Bound To Atp And Magnesium
Length = 409
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 105/225 (46%), Gaps = 13/225 (5%)
Query: 20 LNVARIINEPTAAAIAYGLDKKG--GEKNILVFDLGGGTFDVSILTIDNGVFEVLSTNGD 77
L V ++I+EP AA +AY + +K I+V DLGG DV++L +G++ +L+T D
Sbjct: 178 LEVLQLISEPAAAVLAYDARPEATISDKIIVVADLGGSRSDVTVLASRSGMYTILATVHD 237
Query: 78 THLGGEDFDQRVMEYFXXXXXXXX--XXXXXXXXRAIGXXXXXXXXXXXXXXXQHQVRVE 135
G D+ ++++F R++
Sbjct: 238 YEYHGIALDKVLIDHFSKEFLKKNPGAKDPRENPRSLAKLRLEAESTKRALSRSTNASFS 297
Query: 136 IESLFDGIDFSEPLTRARFEELNNDLFRKTMGPVKKAMEDAGLEKNQIDEIVLVGGSTRI 195
+ESL DG+DF+ + R R+E + +F V+ A++ AGL+ +DE+++ GG++
Sbjct: 298 VESLIDGLDFASTINRLRYETIARTVFEGFNRLVESAVKKAGLDPLDVDEVIMSGGTSNT 357
Query: 196 PKVQQLLKDYF--------DGKEPNKGVNPDEAVAYGAAVQGGIL 232
P++ + F +P+ +NP E A GAA+Q ++
Sbjct: 358 PRIAANFRYIFPESTRILAPSTDPS-ALNPSELQARGAALQASLI 401
>pdb|2P32|A Chain A, Crystal Structure Of The C-Terminal 10 Kda Subdomain From
C. Elegans Hsp70
pdb|2P32|B Chain B, Crystal Structure Of The C-Terminal 10 Kda Subdomain From
C. Elegans Hsp70
pdb|2P32|C Chain C, Crystal Structure Of The C-Terminal 10 Kda Subdomain From
C. Elegans Hsp70
pdb|2P32|D Chain D, Crystal Structure Of The C-Terminal 10 Kda Subdomain From
C. Elegans Hsp70
pdb|2P32|E Chain E, Crystal Structure Of The C-Terminal 10 Kda Subdomain From
C. Elegans Hsp70
pdb|2P32|F Chain F, Crystal Structure Of The C-Terminal 10 Kda Subdomain From
C. Elegans Hsp70
Length = 120
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 35/72 (48%), Positives = 52/72 (72%), Gaps = 1/72 (1%)
Query: 394 LETYVYNMKNQINDKDKLADKLESDEKDKIETAVKEALEWLDDNQSAEKEDYEEKLKEVE 453
LE+Y +N+K I D +KL DK+ ++K KIE E L+WLD NQ+AEKE++E + K++E
Sbjct: 23 LESYAFNLKQTIED-EKLKDKISPEDKKKIEDKCDEILKWLDSNQTAEKEEFEHQQKDLE 81
Query: 454 AVCNPIITAVYQ 465
+ NPII+ +YQ
Sbjct: 82 GLANPIISKLYQ 93
>pdb|1UD0|A Chain A, Crystal Structure Of The C-Terminal 10-Kda Subdomain Of
Hsc70
pdb|1UD0|B Chain B, Crystal Structure Of The C-Terminal 10-Kda Subdomain Of
Hsc70
pdb|1UD0|C Chain C, Crystal Structure Of The C-Terminal 10-Kda Subdomain Of
Hsc70
pdb|1UD0|D Chain D, Crystal Structure Of The C-Terminal 10-Kda Subdomain Of
Hsc70
Length = 113
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 35/74 (47%), Positives = 50/74 (67%), Gaps = 1/74 (1%)
Query: 392 NSLETYVYNMKNQINDKDKLADKLESDEKDKIETAVKEALEWLDDNQSAEKEDYEEKLKE 451
+ LE+Y +N K + D +KL K+ ++K KI E + WLD NQ+AEKE++E + KE
Sbjct: 7 HXLESYAFNXKATVED-EKLQGKINDEDKQKILDKCNEIISWLDKNQTAEKEEFEHQQKE 65
Query: 452 VEAVCNPIITAVYQ 465
+E VCNPIIT +YQ
Sbjct: 66 LEKVCNPIITKLYQ 79
>pdb|3LOF|A Chain A, C-Terminal Domain Of Human Heat Shock 70kda Protein 1b.
pdb|3LOF|B Chain B, C-Terminal Domain Of Human Heat Shock 70kda Protein 1b.
pdb|3LOF|C Chain C, C-Terminal Domain Of Human Heat Shock 70kda Protein 1b.
pdb|3LOF|D Chain D, C-Terminal Domain Of Human Heat Shock 70kda Protein 1b.
pdb|3LOF|E Chain E, C-Terminal Domain Of Human Heat Shock 70kda Protein 1b.
pdb|3LOF|F Chain F, C-Terminal Domain Of Human Heat Shock 70kda Protein 1b
Length = 113
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 53/79 (67%), Gaps = 1/79 (1%)
Query: 386 EKIDARNSLETYVYNMKNQINDKDKLADKLESDEKDKIETAVKEALEWLDDNQSAEKEDY 445
E++ A+N+LE+Y +N K+ + D + L K+ +K K+ +E + WLD N AEK+++
Sbjct: 6 ERVSAKNALESYAFNXKSAVED-EGLKGKISEADKKKVLDKCQEVISWLDANTLAEKDEF 64
Query: 446 EEKLKEVEAVCNPIITAVY 464
E K KE+E VCNPII+ +Y
Sbjct: 65 EHKRKELEQVCNPIISGLY 83
>pdb|2LMG|A Chain A, Solution Structure Of The C-Terminal Domain (537-610) Of
Human Heat Shock Protein 70
Length = 75
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 32/74 (43%), Positives = 50/74 (67%), Gaps = 1/74 (1%)
Query: 390 ARNSLETYVYNMKNQINDKDKLADKLESDEKDKIETAVKEALEWLDDNQSAEKEDYEEKL 449
A+N+LE+Y +NMK+ + D + L K+ +K K+ +E + WLD N AEK+++E K
Sbjct: 3 AKNALESYAFNMKSAVED-EGLKGKISEADKKKVLDKCQEVISWLDANTLAEKDEFEHKR 61
Query: 450 KEVEAVCNPIITAV 463
KE+E VCNPII+ +
Sbjct: 62 KELEQVCNPIISGL 75
>pdb|1JCF|A Chain A, Mreb From Thermotoga Maritima, Trigonal
pdb|1JCG|A Chain A, Mreb From Thermotoga Maritima, Amppnp
pdb|2WUS|A Chain A, Bacterial Actin Mreb Assembles In Complex With Cell Shape
Protein Rodz
pdb|2WUS|B Chain B, Bacterial Actin Mreb Assembles In Complex With Cell Shape
Protein Rodz
Length = 344
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 50/86 (58%), Gaps = 6/86 (6%)
Query: 8 RQATKDAGIIAGLNVARIINEPTAAAIAYGLDKKGGEKNILVFDLGGGTFDVSILTIDNG 67
R+A DAG+ AG + +I EP AAAI L+ + N +V D+GGGT +V+++++ +
Sbjct: 111 RRAILDAGLEAGASKVFLIEEPMAAAIGSNLNVEEPSGN-MVVDIGGGTTEVAVISLGS- 168
Query: 68 VFEVLSTNGDTHLGGEDFDQRVMEYF 93
+ T + G++ D+ +++Y
Sbjct: 169 ----IVTWESIRIAGDEMDEAIVQYV 190
>pdb|1JCE|A Chain A, Mreb From Thermotoga Maritima
Length = 344
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 50/86 (58%), Gaps = 6/86 (6%)
Query: 8 RQATKDAGIIAGLNVARIINEPTAAAIAYGLDKKGGEKNILVFDLGGGTFDVSILTIDNG 67
R+A DAG+ AG + +I EP AAAI L+ + N +V D+GGGT +V+++++ +
Sbjct: 111 RRAILDAGLEAGASKVFLIEEPXAAAIGSNLNVEEPSGNXVV-DIGGGTTEVAVISLGS- 168
Query: 68 VFEVLSTNGDTHLGGEDFDQRVMEYF 93
+ T + G++ D+ +++Y
Sbjct: 169 ----IVTWESIRIAGDEXDEAIVQYV 190
>pdb|3H1Q|A Chain A, Crystal Structure Of Ethanolamine Utilization Protein Eutj
From Carboxydothermus Hydrogenoformans
pdb|3H1Q|B Chain B, Crystal Structure Of Ethanolamine Utilization Protein Eutj
From Carboxydothermus Hydrogenoformans
Length = 272
Score = 31.6 bits (70), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 28/45 (62%), Gaps = 6/45 (13%)
Query: 18 AGLNVARIINEPTAAAIAYGLDKKGGEKNILVFDLGGGTFDVSIL 62
AGL + +++EP AAA A G++ +V D+GGGT ++++
Sbjct: 118 AGLELVTLVDEPVAAARALGINDG------IVVDIGGGTTGIAVI 156
>pdb|3H70|A Chain A, Crystal Structure Of O-Succinylbenzoic Acid Synthetase
From Staphylococcus Aureus Complexed With Mg In The
Active Site
Length = 343
Score = 30.4 bits (67), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 28/54 (51%), Gaps = 7/54 (12%)
Query: 426 AVKEALE-WLDDNQSAEKEDYEEKLKEVEAVCN------PIITAVYQRSGGAPG 472
+VK +E W +DN++ E YE LK V+++ N I+ A+YQ P
Sbjct: 65 SVKHVIEQWFEDNRNKSFETYEAALKLVDSLENTPAARATIVMALYQMFHVLPS 118
>pdb|2OKT|A Chain A, Crystal Structure Of O-Succinylbenzoic Acid Synthetase
From Staphylococcus Aureus, Ligand-Free Form
pdb|2OLA|A Chain A, Crystal Structure Of O-Succinylbenzoic Acid Synthetase
From Staphylococcus Aureus, Cubic Crystal Form
Length = 342
Score = 30.4 bits (67), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 28/54 (51%), Gaps = 7/54 (12%)
Query: 426 AVKEALE-WLDDNQSAEKEDYEEKLKEVEAVCN------PIITAVYQRSGGAPG 472
+VK +E W +DN++ E YE LK V+++ N I+ A+YQ P
Sbjct: 64 SVKHVIEQWFEDNRNKSFETYEAALKLVDSLENTPAARATIVMALYQMFHVLPS 117
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.313 0.135 0.370
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,521,573
Number of Sequences: 62578
Number of extensions: 589774
Number of successful extensions: 1775
Number of sequences better than 100.0: 115
Number of HSP's better than 100.0 without gapping: 80
Number of HSP's successfully gapped in prelim test: 35
Number of HSP's that attempted gapping in prelim test: 1538
Number of HSP's gapped (non-prelim): 130
length of query: 487
length of database: 14,973,337
effective HSP length: 103
effective length of query: 384
effective length of database: 8,527,803
effective search space: 3274676352
effective search space used: 3274676352
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 53 (25.0 bits)